RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DRD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000149295

Ensembl transcript IDs: ENST00000346454.7, ENST00000362072.8, ENST00000535984.1, ENST00000538967.5, ENST00000539420.1, ENST00000540600.5, ENST00000542616.1, ENST00000542968.5, ENST00000543292.1, ENST00000544518.5

Found 631 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTaGTCACGGTTCGCAAGGGTGAGGCTGGCCGGCCTGGGCAGGGAG +
Preference number: 1 (lower is better)
Translates to: RACRGEEEADPPRPS*SRFARVRLAGLGRE
Trigger: CTCCCTGCCCAGGCCGGCCAGCCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
3UTR GCA 90 bp GTGCGGGCAGTGAGGAGCATGGAGCCAAGCGAACACTGCAGGGCCTaGCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCA +
Preference number: 1 (lower is better)
Translates to: VRAVRSMEPSEHCRA*RGEEEADPPRPSCS
Trigger: TGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCATGCTCCTCACTGCCCGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR TCA 90 bp CAGGGCTGGTACCATGCCCAGCTCACTAGCACTGCCCTGGCAGAGTaGGGGTGTGCGGGCAGTGAGGAGCATGGAGCCAAGCGAACACTG +
Preference number: 1 (lower is better)
Translates to: QGWYHAQLTSTALAE*GCAGSEEHGAKRTL
Trigger: CAGTGTTCGCTTGGCTCCATGCTCCTCACTGCCCGCACACCCTCACTCTGCCAGGGCAGTGCTAGTGAGCTGGGCATGGTACCAGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR CCA 90 bp GCTGTGAGAAGGGATACATTGCAGGGCCGTCAGAAGGCAGCAGGGTaGGCTAGGCCAAGGAGTTCCTCTCCCCATAGACCCTCCTGGGCC +
Preference number: 1 (lower is better)
Translates to: AVRRDTLQGRQKAAG*ARPRSSSPHRPSWA
Trigger: GGCCCAGGAGGGTCTATGGGGAGAGGAACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGACGGCCCTGCAATGTATCCCTTCTCACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR GCA 90 bp CTCCCAGGACTGAAGTTGCCTGGCTCCTCGGCAAGAGAGCTTGCTTaGCTCCTGTGGGCCTTGCAGGGTGTGAACTGTCCATCTCTCCCC +
Preference number: 1 (lower is better)
Translates to: LPGLKLPGSSARELA*LLWALQGVNCPSLP
Trigger: GGGGAGAGATGGACAGTTCACACCCTGCAAGGCCCACAGGAGGCAAGCAAGCTCTCTTGCCGAGGAGCCAGGCAACTTCAGTCCTGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR GCA 90 bp GGGTCTCCCAGGACTGAAGTTGCCTGGCTCCTCGGCAAGAGAGCTTaGTTGCCTCCTGTGGGCCTTGCAGGGTGTGAACTGTCCATCTCT +
Preference number: 1 (lower is better)
Translates to: GSPRTEVAWLLGKRA*LPPVGLAGCELSIS
Trigger: AGAGATGGACAGTTCACACCCTGCAAGGCCCACAGGAGGCAAGCAAGCTCTCTTGCCGAGGAGCCAGGCAACTTCAGTCCTGGGAGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR CCA 90 bp GCAGGGTGGGCTAGGCCAAGGAGTTCCTCTCCCCATAGACCCTCCTaGGCCCTTCAAGATGAGGGCTCCTCTTCTCAGAGCATGTGGAAA +
Preference number: 1 (lower is better)
Translates to: AGWARPRSSSPHRPS*ALQDEGSSSQSMWK
Trigger: TTTCCACATGCTCTGAGAAGAGGAGCCCTCATCTTGAAGGGCCCAGGAGGGTCTATGGGGAGAGGAACTCCTTGGCCTAGCCCACCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR TCA 90 bp CTCTTCTCAGAGCATGTGGAAACCACTTGGGGAGCTGTAACGGGGTaGGGTGGGTCCGGACTAGCCTGGAAAGTAGAGGTCCACATCGGG +
Preference number: 1 (lower is better)
Translates to: LFSEHVETTWGAVTG*GGSGLAWKVEVHIG
Trigger: CCCGATGTGGACCTCTACTTTCCAGGCTAGTCCGGACCCACCTCACCCCGTTACAGCTCCCCAAGTGGTTTCCACATGCTCTGAGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR TCA 90 bp TGGGGTCCAACCTGCAGTCTGGTATTTACATGGGTCTCCCAGGACTaGAGTTGCCTGGCTCCTCGGCAAGAGAGCTTGCTTGCCTCCTGT +
Preference number: 1 (lower is better)
Translates to: WGPTCSLVFTWVSQD*SCLAPRQESLLASC
Trigger: ACAGGAGGCAAGCAAGCTCTCTTGCCGAGGAGCCAGGCAACTTCAGTCCTGGGAGACCCATGTAAATACCAGACTGCAGGTTGGACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR CCA 90 bp GCTAAGGTTTTTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTaGTATTTACATGGGTCTCCCAGGACTGAAGTTGCCTGGCTCCTC +
Preference number: 1 (lower is better)
Translates to: AKVFGLGISGVQPAV*YLHGSPRTEVAWLL
Trigger: GAGGAGCCAGGCAACTTCAGTCCTGGGAGACCCATGTAAATACCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR-3UTR TCA 90 bp GCCGTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTCCTCTCCCCATAGACCACGGTTCGCAAGGGTaGGGCTGGCCGGCCTGGGCA +
Preference number: 2 (lower is better)
Translates to: AVRRQQGGLGQGVPLPIDHGSQG*GWPAWA
Trigger: TGCCCAGGCCGGCCAGCCTCACCCTTGCGAACCGTG...GTCTATGGGGAGAGGAACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGACGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR-3UTR CCA 90 bp GGACTGAAGTTGCCTGGCTCCTCGGCAAGAGAGCTTGCTTGCCTCCTGTGGGCCGCCTGGGCAGGGAGGTaGGAAGCAGGCTGCTGTGCG +
Preference number: 2 (lower is better)
Translates to: GLKLPGSSARELACLLWAAWAGR*EAGCCA
Trigger: CGCACAGCAGCCTGCTTCCCACCTCCCTGCCCAGGC...GGCCCACAGGAGGCAAGCAAGCTCTCTTGCCGAGGAGCCAGGCAACTTCAGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR-3UTR TCA 90 bp GCTAGGCCAAGGAGTTCCTCTCCCCATAGACCCTCCTGGGCCCTTCAAGATGAGCACGGTTCGCAAGGGTaGGGCTGGCCGGCCTGGGCA +
Preference number: 2 (lower is better)
Translates to: ARPRSSSPHRPSWALQDEHGSQG*GWPAWA
Trigger: TGCCCAGGCCGGCCAGCCTCACCCTTGCGAACCGTG...CTCATCTTGAAGGGCCCAGGAGGGTCTATGGGGAGAGGAACTCCTTGGCCTAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR-3UTR CCA 90 bp CCAGCAACCCTAGAGCCCCAGAGGAAGGTCAAGGAAGGCGGCTGCATCTTTGGTGCCTGGGCAGGGAGGTaGGAAGCAGGCTGCTGTGCG +
Preference number: 2 (lower is better)
Translates to: PATLEPQRKVKEGGCIFGAWAGR*EAGCCA
Trigger: CGCACAGCAGCCTGCTTCCCACCTCCCTGCCCAGGC...ACCAAAGATGCAGCCGCCTTCCTTGACCTTCCTCTGGGGCTCTAGGGTTGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR-3UTR GCA 90 bp GTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTCCTCTCCCCATAGACCCTGAGCCAAGCGAACACTaGAGGGCCTGCCGGGGTGAA +
Preference number: 2 (lower is better)
Translates to: VRRQQGGLGQGVPLPIDPEPSEH*RACRGE
Trigger: TTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTC...AGGGTCTATGGGGAGAGGAACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR-3UTR TCA 90 bp TGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTTACATGGGTCTCCCAGGGCCTGCCGGGGTaGAGAGGAGGCCGATCCACC +
Preference number: 2 (lower is better)
Translates to: WLGNLWGPTCSLVFTWVSQGLPG*RGGRST
Trigger: GGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTG...GGAGACCCATGTAAATACCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR-3UTR TCA 90 bp GTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTCCTCTCCCCATAGACCCTGGGCCTTGCAGGGTGTaGACTGTCCATCTCTCCCCA +
Preference number: 2 (lower is better)
Translates to: VRRQQGGLGQGVPLPIDPGPCRV*TVHLSP
Trigger: TGGGGAGAGATGGACAGTTCACACCCTGCAAGGCCC...AGGGTCTATGGGGAGAGGAACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR-3UTR TCA 90 bp AGGGATACATTGCAGGGCCGTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTGGGCCTTGCAGGGTGTaGACTGTCCATCTCTCCCCA +
Preference number: 2 (lower is better)
Translates to: RDTLQGRQKAAGWARPRSGPCRV*TVHLSP
Trigger: TGGGGAGAGATGGACAGTTCACACCCTGCAAGGCCC...ACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGACGGCCCTGCAATGTATCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR-3UTR GCA 90 bp GCTAGGCCAAGGAGTTCCTCTCCCCATAGACCCTCCTGGGCCCTTCAAGATGAGGAGCCAAGCGAACACTaGAGGGCCTGCCGGGGTGAA +
Preference number: 2 (lower is better)
Translates to: ARPRSSSPHRPSWALQDEEPSEH*RACRGE
Trigger: TTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTC...CTCATCTTGAAGGGCCCAGGAGGGTCTATGGGGAGAGGAACTCCTTGGCCTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR-3UTR GCA 90 bp CAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTCCTCTCCCCATAGACCCTCCCTCGGCAAGAGAGCTTaGTTGCCTCCTGTGGGCCTT +
Preference number: 2 (lower is better)
Translates to: QKAAGWARPRSSSPHRPSLGKRA*LPPVGL
Trigger: AAGGCCCACAGGAGGCAAGCAAGCTCTCTTGCCGAG...GGAGGGTCTATGGGGAGAGGAACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR-3UTR TCA 90 bp TTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTTACATGGGTCTCCACGGTTCGCAAGGGTaGGGCTGGCCGGCCTGGGCA +
Preference number: 2 (lower is better)
Translates to: LAWESLGSNLQSGIYMGLHGSQG*GWPAWA
Trigger: TGCCCAGGCCGGCCAGCCTCACCCTTGCGAACCGTG...GAGACCCATGTAAATACCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR-3UTR TCA 90 bp GAGGGAGCTAAGGTTTTTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGAGGGTGTGCGGGCAGTaGGGAGCATGGAGCCAAGCG +
Preference number: 2 (lower is better)
Translates to: EGAKVFGLGISGVQPAVWRVCGQ*GAWSQA
Trigger: CGCTTGGCTCCATGCTCCTCACTGCCCGCACACCCT...CCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAGCTCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR-3UTR CCA 90 bp GGGTCCAACCTGCAGTCTGGTATTTACATGGGTCTCCCAGGACTGAAGTTGCCTGCCTGGGCAGGGAGGTaGGAAGCAGGCTGCTGTGCG +
Preference number: 2 (lower is better)
Translates to: GSNLQSGIYMGLPGLKLPAWAGR*EAGCCA
Trigger: CGCACAGCAGCCTGCTTCCCACCTCCCTGCCCAGGC...AGGCAACTTCAGTCCTGGGAGACCCATGTAAATACCAGACTGCAGGTTGGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR-3UTR CCA 90 bp GGACTGAAGTTGCCTGGCTCCTCGGCAAGAGAGCTTGCTTGCCTCCTGTGGGCCAGAAAACTCAGCCTCTaGGCCCTGACTCAGGCTCCA +
Preference number: 2 (lower is better)
Translates to: GLKLPGSSARELACLLWARKLSL*ALTQAP
Trigger: TGGAGCCTGAGTCAGGGCCCAGAGGCTGAGTTTTCT...GGCCCACAGGAGGCAAGCAAGCTCTCTTGCCGAGGAGCCAGGCAACTTCAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR-3UTR CCA 90 bp AGGGATACATTGCAGGGCCGTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTCTTGCTTGCCTCCTGTaGGCCTTGCAGGGTGTGAAC +
Preference number: 2 (lower is better)
Translates to: RDTLQGRQKAAGWARPRSLACLL*ALQGVN
Trigger: GTTCACACCCTGCAAGGCCCACAGGAGGCAAGCAAG...ACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGACGGCCCTGCAATGTATCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR-3UTR CCA 90 bp CAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTCCTCTCCCCATAGACCCTCCTGGCTTGGGAATCTCTaGGGTCCAACCTGCAGTCTG +
Preference number: 2 (lower is better)
Translates to: QKAAGWARPRSSSPHRPSWLGNL*GPTCSL
Trigger: CAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCA...GGAGGGTCTATGGGGAGAGGAACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR-3UTR TCA 90 bp GAGCTAAGGTTTTTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTCAGGGCCTGCCGGGGTaGAGAGGAGGCCGATCCACC +
Preference number: 2 (lower is better)
Translates to: ELRFLAWESLGSNLQSGIQGLPG*RGGRST
Trigger: GGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTG...AATACCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR-3UTR GCA 90 bp ATGAGGGCTCCTCTTCTCAGAGCATGTGGAAACCACTTGGGGAGCTGTAACGGGGAGCCAAGCGAACACTaGAGGGCCTGCCGGGGTGAA +
Preference number: 2 (lower is better)
Translates to: MRAPLLRACGNHLGSCNGEPSEH*RACRGE
Trigger: TTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTC...CCCGTTACAGCTCCCCAAGTGGTTTCCACATGCTCTGAGAAGAGGAGCCCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR-3UTR GCA 90 bp GAGGGAGCTAAGGTTTTTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGGAGCCAAGCGAACACTaGAGGGCCTGCCGGGGTGAA +
Preference number: 2 (lower is better)
Translates to: EGAKVFGLGISGVQPAVWEPSEH*RACRGE
Trigger: TTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTC...CCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAGCTCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR-3UTR GCA 90 bp GCTAGGCCAAGGAGTTCCTCTCCCCATAGACCCTCCTGGGCCCTTCAAGATGAGCTCGGCAAGAGAGCTTaGTTGCCTCCTGTGGGCCTT +
Preference number: 2 (lower is better)
Translates to: ARPRSSSPHRPSWALQDELGKRA*LPPVGL
Trigger: AAGGCCCACAGGAGGCAAGCAAGCTCTCTTGCCGAG...CTCATCTTGAAGGGCCCAGGAGGGTCTATGGGGAGAGGAACTCCTTGGCCTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR-3UTR GCA 90 bp GCTAGGCCAAGGAGTTCCTCTCCCCATAGACCCTCCTGGGCCCTTCAAGATGAGAGGTCCACATCGGGGTaGGGGAGGGAGCTAAGGTTT +
Preference number: 2 (lower is better)
Translates to: ARPRSSSPHRPSWALQDERSTSG*GRELRF
Trigger: AAACCTTAGCTCCCTCCCGCACCCCGATGTGGACCT...CTCATCTTGAAGGGCCCAGGAGGGTCTATGGGGAGAGGAACTCCTTGGCCTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR-3UTR CCA 90 bp AGGGATACATTGCAGGGCCGTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTAGAAAACTCAGCCTCTaGGCCCTGACTCAGGCTCCA +
Preference number: 2 (lower is better)
Translates to: RDTLQGRQKAAGWARPRSRKLSL*ALTQAP
Trigger: TGGAGCCTGAGTCAGGGCCCAGAGGCTGAGTTTTCT...ACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGACGGCCCTGCAATGTATCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR-3UTR CCA 90 bp GTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTCCTCTCCCCATAGACCCTTGGCTTGGGAATCTCTaGGGTCCAACCTGCAGTCTG +
Preference number: 2 (lower is better)
Translates to: VRRQQGGLGQGVPLPIDPWLGNL*GPTCSL
Trigger: CAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCA...AGGGTCTATGGGGAGAGGAACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR CAA 90 bp TCCAACCTGCAGTCTGGTATTTACATGGGTCTCCCAGGACTGAAGTaGCCTGGCTCCTCGGCAAGAGAGCTTGCTTGCCTCCTGTGGGCC +
Preference number: 2 (lower is better)
Translates to: SNLQSGIYMGLPGLK*PGSSARELACLLWA
Trigger: GGCCCACAGGAGGCAAGCAAGCTCTCTTGCCGAGGAGCCAGGCAACTTCAGTCCTGGGAGACCCATGTAAATACCAGACTGCAGGTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR CAA 90 bp CCCTTCAAGATGAGGGCTCCTCTTCTCAGAGCATGTGGAAACCACTaGGGGAGCTGTAACGGGGTGAGGTGGGTCCGGACTAGCCTGGAA +
Preference number: 2 (lower is better)
Translates to: PFKMRAPLLRACGNH*GSCNGVRWVRTSLE
Trigger: TTCCAGGCTAGTCCGGACCCACCTCACCCCGTTACAGCTCCCCAAGTGGTTTCCACATGCTCTGAGAAGAGGAGCCCTCATCTTGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR-3UTR CCA 90 bp GAGCTAAGGTTTTTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTGCCTGGGCAGGGAGGTaGGAAGCAGGCTGCTGTGCG +
Preference number: 2 (lower is better)
Translates to: ELRFLAWESLGSNLQSGIAWAGR*EAGCCA
Trigger: CGCACAGCAGCCTGCTTCCCACCTCCCTGCCCAGGC...AATACCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR-3UTR GCA 90 bp GTTTTGCGTCAGAGTGTGGCAGAGGCAGTCCCTCAAAGAACCTCTGATGTCCCCAGGTCCACATCGGGGTaGGGGAGGGAGCTAAGGTTT +
Preference number: 2 (lower is better)
Translates to: VLRQSVAEAVPQRTSDVPRSTSG*GRELRF
Trigger: AAACCTTAGCTCCCTCCCGCACCCCGATGTGGACCT...GGGGACATCAGAGGTTCTTTGAGGGACTGCCTCTGCCACACTCTGACGCAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000544518.5
3UTR-3UTR CCA 90 bp GGGTCCAACCTGCAGTCTGGTATTTACATGGGTCTCCCAGGACTGAAGTTGCCTTCACTAGCACTGCCCTaGCAGAGTGAGGGTGTGCGG +
Preference number: 2 (lower is better)
Translates to: GSNLQSGIYMGLPGLKLPSLALP*QSEGVR
Trigger: CCGCACACCCTCACTCTGCCAGGGCAGTGCTAGTGA...AGGCAACTTCAGTCCTGGGAGACCCATGTAAATACCAGACTGCAGGTTGGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR-3UTR CCA 90 bp GGGGTCCAACCTGCAGTCTGGTATTTACATGGGTCTCCCAGGACTGAAGTTGCCCTTGCTTGCCTCCTGTaGGCCTTGCAGGGTGTGAAC +
Preference number: 2 (lower is better)
Translates to: GVQPAVWYLHGSPRTEVALACLL*ALQGVN
Trigger: GTTCACACCCTGCAAGGCCCACAGGAGGCAAGCAAG...GGCAACTTCAGTCCTGGGAGACCCATGTAAATACCAGACTGCAGGTTGGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR-3UTR CCA 90 bp AGGGATACATTGCAGGGCCGTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTCTTCTCAGAGCATGTaGAAACCACTTGGGGAGCTG +
Preference number: 2 (lower is better)
Translates to: RDTLQGRQKAAGWARPRSSSQSM*KPLGEL
Trigger: CAGCTCCCCAAGTGGTTTCCACATGCTCTGAGAAGA...ACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGACGGCCCTGCAATGTATCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR-3UTR CCA 90 bp ATGAGGGCTCCTCTTCTCAGAGCATGTGGAAACCACTTGGGGAGCTGTAACGGGTGGCTTGGGAATCTCTaGGGTCCAACCTGCAGTCTG +
Preference number: 2 (lower is better)
Translates to: MRAPLLRACGNHLGSCNGWLGNL*GPTCSL
Trigger: CAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCA...CCCGTTACAGCTCCCCAAGTGGTTTCCACATGCTCTGAGAAGAGGAGCCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR-3UTR CCA 90 bp ATGAGGGCTCCTCTTCTCAGAGCATGTGGAAACCACTTGGGGAGCTGTAACGGGGGGTCCGGACTAGCCTaGAAAGTAGAGGTCCACATC +
Preference number: 2 (lower is better)
Translates to: MRAPLLRACGNHLGSCNGGSGLA*KVEVHI
Trigger: GATGTGGACCTCTACTTTCCAGGCTAGTCCGGACCC...CCCGTTACAGCTCCCCAAGTGGTTTCCACATGCTCTGAGAAGAGGAGCCCTCAT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR-3UTR GCA 90 bp GAGGGAGCTAAGGTTTTTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGGTCAAGGAAGGCGGCTaGATCTTTGGTGCCAAGGAT +
Preference number: 2 (lower is better)
Translates to: EGAKVFGLGISGVQPAVWVKEGG*IFGAKD
Trigger: ATCCTTGGCACCAAAGATGCAGCCGCCTTCCTTGAC...CCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAGCTCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR-3UTR CCA 90 bp CCTCTCCCCATAGACCCTCCTGGGCCCTTCAAGATGAGGGCTCCTCTTCTCAGACTAAGGTTTTTGGCTTaGGAATCTCTGGGGTCCAAC +
Preference number: 2 (lower is better)
Translates to: PLPIDPPGPFKMRAPLLRLRFLA*ESLGSN
Trigger: GTTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAG...TCTGAGAAGAGGAGCCCTCATCTTGAAGGGCCCAGGAGGGTCTATGGGGAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR-3UTR CCA 90 bp AGGAAAGTGGTTTTGCGTCAGAGTGTGGCAGAGGCAGTCCCTCAAAGAACCTCTAGGACTGAAGTTGCCTaGCTCCTCGGCAAGAGAGCT +
Preference number: 2 (lower is better)
Translates to: RKVVLRQSVAEAVPQRTSRTEVA*LLGKRA
Trigger: AGCTCTCTTGCCGAGGAGCCAGGCAACTTCAGTCCT...AGAGGTTCTTTGAGGGACTGCCTCTGCCACACTCTGACGCAAAACCACTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000544518.5
3UTR GCA 72 bp CGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTaGTCACGGTTCGCAAGGGTGAGGCTGGCCGGCCTG +
Preference number: 3 (lower is better)
Translates to: RGEEEADPPRPS*SRFARVRLAGL
Trigger: CAGGCCGGCCAGCCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
3UTR GCA 72 bp GTGAGGAGCATGGAGCCAAGCGAACACTGCAGGGCCTaGCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCT +
Preference number: 3 (lower is better)
Translates to: VRSMEPSEHCRA*RGEEEADPPRP
Trigger: AGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCATGCTCCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR GCA 72 bp GTGCGGGCAGTGAGGAGCATGGAGCCAAGCGAACACTaGAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCA +
Preference number: 3 (lower is better)
Translates to: VRAVRSMEPSEH*RACRGEEEADP
Trigger: TGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCATGCTCCTCACTGCCCGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR CCA 72 bp AGGGCTGGTACCATGCCCAGCTCACTAGCACTGCCCTaGCAGAGTGAGGGTGTGCGGGCAGTGAGGAGCATG +
Preference number: 3 (lower is better)
Translates to: RAGTMPSSLALP*QSEGVRAVRSM
Trigger: CATGCTCCTCACTGCCCGCACACCCTCACTCTGCCAGGGCAGTGCTAGTGAGCTGGGCATGGTACCAGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR-3UTR CAA 90 bp GCCGTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTCCTCTCCCCATAGACCCTCGGCAAGAGAGCTaGCTTGCCTCCTGTGGGCCT +
Preference number: 3 (lower is better)
Translates to: AVRRQQGGLGQGVPLPIDPRQES*LASCGP
Trigger: AGGCCCACAGGAGGCAAGCAAGCTCTCTTGCCGAGG...GTCTATGGGGAGAGGAACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGACGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR-3UTR CAA 90 bp CAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTCCTCTCCCCATAGACCCTCCGCATGTGGAAACCACTaGGGGAGCTGTAACGGGGTG +
Preference number: 3 (lower is better)
Translates to: QKAAGWARPRSSSPHRPSACGNH*GSCNGV
Trigger: CACCCCGTTACAGCTCCCCAAGTGGTTTCCACATGC...GGAGGGTCTATGGGGAGAGGAACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR CCA 72 bp AGGGATACATTGCAGGGCCGTCAGAAGGCAGCAGGGTaGGCTAGGCCAAGGAGTTCCTCTCCCCATAGACCC +
Preference number: 3 (lower is better)
Translates to: RDTLQGRQKAAG*ARPRSSSPHRP
Trigger: GGGTCTATGGGGAGAGGAACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGACGGCCCTGCAATGTATCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR-3UTR CAA 90 bp CCTCTCCCCATAGACCCTCCTGGGCCCTTCAAGATGAGGGCTCCTCTTCTCAGAGGCAAGAGAGCTTGCTaGCCTCCTGTGGGCCTTGCA +
Preference number: 3 (lower is better)
Translates to: PLPIDPPGPFKMRAPLLRGKRAC*PPVGLA
Trigger: TGCAAGGCCCACAGGAGGCAAGCAAGCTCTCTTGCC...TCTGAGAAGAGGAGCCCTCATCTTGAAGGGCCCAGGAGGGTCTATGGGGAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR GCA 72 bp ACCCTAGAGCCCCAGAGGAAGGTCAAGGAAGGCGGCTaGATCTTTGGTGCCAAGGATAGGGGGACTGGAGGT +
Preference number: 3 (lower is better)
Translates to: TLEPQRKVKEGG*IFGAKDRGTGG
Trigger: ACCTCCAGTCCCCCTATCCTTGGCACCAAAGATGCAGCCGCCTTCCTTGACCTTCCTCTGGGGCTCTAGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR GCA 72 bp CTGAAGTTGCCTGGCTCCTCGGCAAGAGAGCTTGCTTaGCTCCTGTGGGCCTTGCAGGGTGTGAACTGTCCA +
Preference number: 3 (lower is better)
Translates to: LKLPGSSARELA*LLWALQGVNCP
Trigger: TGGACAGTTCACACCCTGCAAGGCCCACAGGAGGCAAGCAAGCTCTCTTGCCGAGGAGCCAGGCAACTTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR GCA 72 bp AGGACTGAAGTTGCCTGGCTCCTCGGCAAGAGAGCTTaGTTGCCTCCTGTGGGCCTTGCAGGGTGTGAACTG +
Preference number: 3 (lower is better)
Translates to: RTEVAWLLGKRA*LPPVGLAGCEL
Trigger: CAGTTCACACCCTGCAAGGCCCACAGGAGGCAAGCAAGCTCTCTTGCCGAGGAGCCAGGCAACTTCAGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR TCA 72 bp GAGCATGTGGAAACCACTTGGGGAGCTGTAACGGGGTaGGGTGGGTCCGGACTAGCCTGGAAAGTAGAGGTC +
Preference number: 3 (lower is better)
Translates to: EHVETTWGAVTG*GGSGLAWKVEV
Trigger: GACCTCTACTTTCCAGGCTAGTCCGGACCCACCTCACCCCGTTACAGCTCCCCAAGTGGTTTCCACATGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR-3UTR CAA 90 bp GGGTCCAACCTGCAGTCTGGTATTTACATGGGTCTCCCAGGACTGAAGTTGCCTTGCCTCCTGTGGGCCTaGCAGGGTGTGAACTGTCCA +
Preference number: 3 (lower is better)
Translates to: GSNLQSGIYMGLPGLKLPCLLWA*QGVNCP
Trigger: TGGACAGTTCACACCCTGCAAGGCCCACAGGAGGCA...AGGCAACTTCAGTCCTGGGAGACCCATGTAAATACCAGACTGCAGGTTGGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR TCA 72 bp TCAGAGTGTGGCAGAGGCAGTCCCTCAAAGAACCTCTaGTGTCCCCTAGCCCAGGCCCAGATAGAGTTCCAG +
Preference number: 3 (lower is better)
Translates to: SECGRGSPSKNL*CPLAQAQIEFQ
Trigger: CTGGAACTCTATCTGGGCCTGGGCTAGGGGACATCAGAGGTTCTTTGAGGGACTGCCTCTGCCACACTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000544518.5
3UTR CCA 72 bp TGTGGAAACCACTTGGGGAGCTGTAACGGGGTGAGGTaGGTCCGGACTAGCCTGGAAAGTAGAGGTCCACAT +
Preference number: 3 (lower is better)
Translates to: CGNHLGSCNGVR*VRTSLESRGPH
Trigger: ATGTGGACCTCTACTTTCCAGGCTAGTCCGGACCCACCTCACCCCGTTACAGCTCCCCAAGTGGTTTCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR-3UTR CAA 90 bp TTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTTACATGGGTCTCTGCCTCCTGTGGGCCTaGCAGGGTGTGAACTGTCCA +
Preference number: 3 (lower is better)
Translates to: LAWESLGSNLQSGIYMGLCLLWA*QGVNCP
Trigger: TGGACAGTTCACACCCTGCAAGGCCCACAGGAGGCA...GAGACCCATGTAAATACCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR-3UTR CAA 90 bp AGGAAAGTGGTTTTGCGTCAGAGTGTGGCAGAGGCAGTCCCTCAAAGAACCTCTGGCAAGAGAGCTTGCTaGCCTCCTGTGGGCCTTGCA +
Preference number: 3 (lower is better)
Translates to: RKVVLRQSVAEAVPQRTSGKRAC*PPVGLA
Trigger: TGCAAGGCCCACAGGAGGCAAGCAAGCTCTCTTGCC...AGAGGTTCTTTGAGGGACTGCCTCTGCCACACTCTGACGCAAAACCACTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000544518.5
3UTR-3UTR CAA 90 bp GCTAGGCCAAGGAGTTCCTCTCCCCATAGACCCTCCTGGGCCCTTCAAGATGAGGCTAAGGTTTTTGGCTaGGGAATCTCTGGGGTCCAA +
Preference number: 3 (lower is better)
Translates to: ARPRSSSPHRPSWALQDEAKVFG*GISGVQ
Trigger: TTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAGC...CTCATCTTGAAGGGCCCAGGAGGGTCTATGGGGAGAGGAACTCCTTGGCCTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR TCA 72 bp ACCTGCAGTCTGGTATTTACATGGGTCTCCCAGGACTaGAGTTGCCTGGCTCCTCGGCAAGAGAGCTTGCTT +
Preference number: 3 (lower is better)
Translates to: TCSLVFTWVSQD*SCLAPRQESLL
Trigger: AAGCAAGCTCTCTTGCCGAGGAGCCAGGCAACTTCAGTCCTGGGAGACCCATGTAAATACCAGACTGCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
3UTR CCA 72 bp TTTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTaGTATTTACATGGGTCTCCCAGGACTGAAGTTGCC +
Preference number: 3 (lower is better)
Translates to: FGLGISGVQPAV*YLHGSPRTEVA
Trigger: GGCAACTTCAGTCCTGGGAGACCCATGTAAATACCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp CAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGCTGGCCGGCCTGGGCAGGGAGTCCGCCTTCCCGTCTaGCCCGTTGAAGGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: QAFLLTVRKGEAGRPGQGVRLPV*PVEGPA
Trigger: AGCCGGCCCTTCAACGGGTCAGACGGGAAGGCGGAC...TCCCTGCCCAGGCCGGCCAGCCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp GGAGCATGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGCAGGGCCTGCCGGGGTaGAGAGGAGGCCGATCCACC +
Preference number: 4 (lower is better)
Translates to: GAWSQANTAGPAGVKRRPQGLPG*RGGRST
Trigger: GGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTG...CGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCATGCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp AGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGCCCTCAGGTGGGCCCTaGAAGCTCGGCTGCTGCGTT +
Preference number: 4 (lower is better)
Translates to: RACRGEEEADPPRPSCSRPSGGP*KLGCCV
Trigger: AACGCAGCAGCCGAGCTTTCAGGGCCCACCTGAGGG...CCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp GGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTCCCTCAGGTGGGCCCTaGAAGCTCGGCTGCTGCGTT +
Preference number: 4 (lower is better)
Translates to: GPAGVKRRPIHPGLPAHGPSGGP*KLGCCV
Trigger: AACGCAGCAGCCGAGCTTTCAGGGCCCACCTGAGGG...ACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp TGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCACGGTTCGCAAGGGTaGGGCTGGCCGGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: WSQANTAGPAGVKRRPIHHGSQG*GWPAWA
Trigger: TGCCCAGGCCGGCCAGCCTCACCCTTGCGAACCGTG...GTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp GGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGCAGGGCCTGCCGGGGTaGAGAGGAGGCCGATCCACC +
Preference number: 4 (lower is better)
Translates to: GVKRRPIHPGLPAHGSQGQGLPG*RGGRST
Trigger: GGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTG...CCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp AACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTCAGGGCCTGCCGGGGTaGAGAGGAGGCCGATCCACC +
Preference number: 4 (lower is better)
Translates to: NTAGPAGVKRRPIHPGLPQGLPG*RGGRST
Trigger: GGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTG...AGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp GGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTAGGGTGTGCGGGCAGTaGGGAGCATGGAGCCAAGCG +
Preference number: 4 (lower is better)
Translates to: GPAGVKRRPIHPGLPAHGRVCGQ*GAWSQA
Trigger: CGCTTGGCTCCATGCTCCTCACTGCCCGCACACCCT...ACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp GGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTGAACACTGCAGGGCCTaGCGGGGTGAAGAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: GPAGVKRRPIHPGLPAHGEHCRA*RGEEEA
Trigger: GGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTC...ACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp CAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGCTGGCCGGCCTGGGCAGGGAGGTGGCTGGGTGGGATaGGGCTGTACCGGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: QAFLLTVRKGEAGRPGQGGGWVG*GCTGSS
Trigger: AGAGGACCCGGTACAGCCCCATCCCACCCAGCCACC...TCCCTGCCCAGGCCGGCCAGCCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTGGCTGGGTGGGATaGGGCTGTACCGGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: AGPAGVKRRPIHPGLPAHGGWVG*GCTGSS
Trigger: AGAGGACCCGGTACAGCCCCATCCCACCCAGCCACC...GTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGCTGGCGCCTGGGCAGGGAGGTaGGAAGCAGGCTGCTGTGCG +
Preference number: 4 (lower is better)
Translates to: GGRSTQAFLLTVRKGEAGAWAGR*EAGCCA
Trigger: CGCACAGCAGCCTGCTTCCCACCTCCCTGCCCAGGC...GCCAGCCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp TGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACGGGCGGTGGAGCCACTaGGTGGCCAGGCTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: WSQANTAGPAGVKRRPIHGRWSH*VARLWP
Trigger: TGGCCAGAGCCTGGCCACCCAGTGGCTCCACCGCCC...GTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542968.5
CDS-3UTR TCA 90 bp GGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGGTCCGCCTTCCCGTCTaGCCCGTTGAAGGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: GVKRRPIHPGLPAHGSQGVRLPV*PVEGPA
Trigger: AGCCGGCCCTTCAACGGGTCAGACGGGAAGGCGGAC...CCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp AGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGCGGCCACTGCGAGGCTaGCGATCAGGTAGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: RACRGEEEADPPRPSCSRRPLRG*RSGSWW
Trigger: CCACCAACTACCTGATCGTCAGCCTCGCAGTGGCCG...CCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp GCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACCGGCCACTGCGAGGCTaGCGATCAGGTAGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: AGPAGVKRRPIHPGLPAHRPLRG*RSGSWW
Trigger: CCACCAACTACCTGATCGTCAGCCTCGCAGTGGCCG...GTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp GAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGCACGGTTCGCAAGGGTaGGGCTGGCCGGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: EEEADPPRPSCSRFARVRHGSQG*GWPAWA
Trigger: TGCCCAGGCCGGCCAGCCTCACCCTTGCGAACCGTG...CCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp CAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGCTGGCCGGCCTGGGCAGGGACGCGGGACACAGCCATaGACACCAGCACGTTGCCGA +
Preference number: 4 (lower is better)
Translates to: QAFLLTVRKGEAGRPGQGRGTQP*TPARCR
Trigger: TCGGCAACGTGCTGGTGTGCATGGCTGTGTCCCGCG...TCCCTGCCCAGGCCGGCCAGCCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp GAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCGAACACTGCAGGGCCTaGCGGGGTGAAGAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: EHCRACRGEEEADPPRPSEHCRA*RGEEEA
Trigger: GGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTC...GGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp AGGAGCATGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCCGCCGGGCAGCCTCCTaGACCACTCTCCGCCTGTTC +
Preference number: 4 (lower is better)
Translates to: RSMEPSEHCRACRGEEEARRAAS*TTLRLF
Trigger: GAACAGGCGGAGAGTGGTGCAGGAGGCTGCCCGGCG...GGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCATGCTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538967.5
CDS-3UTR CCA 90 bp CCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGGGTGGCTGGGTGGGATaGGGCTGTACCGGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: PSEHCRACRGEEEADPPRGGWVG*GCTGSS
Trigger: AGAGGACCCGGTACAGCCCCATCCCACCCAGCCACC...CCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp AGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTCGGGGAGAGTCAGCTaGTGGTGGCTGGGTGGGATG +
Preference number: 4 (lower is better)
Translates to: RACRGEEEADPPRPSCSRSGRVS*WWLGGM
Trigger: CATCCCACCCAGCCACCACCAGCTGACTCTCCCCGA...CCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp AGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGGTGCTGTGGAGACCATaGTGGGACGGGTCGGGGAGA +
Preference number: 4 (lower is better)
Translates to: RACRGEEEADPPRPSCSRVLWRP*WDGSGR
Trigger: TCTCCCCGACCCGTCCCACCATGGTCTCCACAGCAC...CCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGTGCTGTGGAGACCATaGTGGGACGGGTCGGGGAGA +
Preference number: 4 (lower is better)
Translates to: AGPAGVKRRPIHPGLPAHVLWRP*WDGSGR
Trigger: TCTCCCCGACCCGTCCCACCATGGTCTCCACAGCAC...GTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTCTGTCGGGAGTGCTGTaGAGACCATGGTGGGACGGG +
Preference number: 4 (lower is better)
Translates to: GPAGVKRRPIHPGLPAHGLSGVL*RPWWDG
Trigger: CCCGTCCCACCATGGTCTCCACAGCACTCCCGACAG...ACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp AACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCCTGGGCAGGGAGGTaGGAAGCAGGCTGCTGTGCG +
Preference number: 4 (lower is better)
Translates to: NTAGPAGVKRRPIHPGLPAWAGR*EAGCCA
Trigger: CGCACAGCAGCCTGCTTCCCACCTCCCTGCCCAGGC...AGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp GTGAGGAGCATGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGTCCGCCTTCCCGTCTaGCCCGTTGAAGGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: VRSMEPSEHCRACRGEEEVRLPV*PVEGPA
Trigger: AGCCGGCCCTTCAACGGGTCAGACGGGAAGGCGGAC...CTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCATGCTCCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp CAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGCTGGCCGGCCTGGGCAGGGATGCTGCGTTTGGTGTTaGCTCGCTTGCGGCGTCTGC +
Preference number: 4 (lower is better)
Translates to: QAFLLTVRKGEAGRPGQGCCVWC*LACGVC
Trigger: GCAGACGCCGCAAGCGAGTCAACACCAAACGCAGCA...TCCCTGCCCAGGCCGGCCAGCCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp AACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTCCCTCAGGTGGGCCCTaGAAGCTCGGCTGCTGCGTT +
Preference number: 4 (lower is better)
Translates to: NTAGPAGVKRRPIHPGLPPSGGP*KLGCCV
Trigger: AACGCAGCAGCCGAGCTTTCAGGGCCCACCTGAGGG...AGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp AGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGCATAGCCCAGCCACGTaGAGGCGCTGTACAGGACAG +
Preference number: 4 (lower is better)
Translates to: RACRGEEEADPPRPSCSRHSPAT*RRCTGQ
Trigger: CTGTCCTGTACAGCGCCTTCACGTGGCTGGGCTATG...CCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp CCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCGCGGGACACAGCCATaGACACCAGCACGTTGCCGA +
Preference number: 4 (lower is better)
Translates to: PSEHCRACRGEEEADPPRRGTQP*TPARCR
Trigger: TCGGCAACGTGCTGGTGTGCATGGCTGTGTCCCGCG...CCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp GGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTGAGGAGGTCGGCCACTaGGAGGCTGACGATCAGGTA +
Preference number: 4 (lower is better)
Translates to: GPAGVKRRPIHPGLPAHGEEVGH*EADDQV
Trigger: TACCTGATCGTCAGCCTCGCAGTGGCCGACCTCCTC...ACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp AGGAGCATGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCATCAGGGCGGTaGAGCCACTGGGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RSMEPSEHCRACRGEEEADPSGR*SHWVAR
Trigger: CCTGGCCACCCAGTGGCTCCACCGCCCTGATGGATC...GGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCATGCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCAGTGGAGCCCTCAGGTaGGCCCTGAAAGCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: EHCRACRGEEEADPPRPSSGALR*ALKARL
Trigger: CAGCCGAGCTTTCAGGGCCCACCTGAGGGCTCCACT...GGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp CAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGCTGGCCGGCCTGGGCAGGGATCCTCTCGGGTGGGCTaGTGCTGGAGAGCATCTCCA +
Preference number: 4 (lower is better)
Translates to: QAFLLTVRKGEAGRPGQGSSRVG*CWRASP
Trigger: TGGAGATGCTCTCCAGCACCAGCCCACCCGAGAGGA...TCCCTGCCCAGGCCGGCCAGCCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGCCGGGTCCTCTCGGGTaGGCTGGTGCTGGAGAGCAT +
Preference number: 4 (lower is better)
Translates to: GVKRRPIHPGLPAHGSQGPGPLG*AGAGEH
Trigger: ATGCTCTCCAGCACCAGCCCACCCGAGAGGACCCGG...CCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp AGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGTGGCTGGGTGGGATaGGGCTGTACCGGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: SQANTAGPAGVKRRPIHPGGWVG*GCTGSS
Trigger: AGAGGACCCGGTACAGCCCCATCCCACCCAGCCACC...TGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp TGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACGGTGGCTGGGTGGGATaGGGCTGTACCGGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: WSQANTAGPAGVKRRPIHGGWVG*GCTGSS
Trigger: AGAGGACCCGGTACAGCCCCATCCCACCCAGCCACC...GTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GGAGCATGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGCTGTGGAGACCATGGTaGGACGGGTCGGGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: GAWSQANTAGPAGVKRRPLWRPW*DGSGRV
Trigger: GACTCTCCCCGACCCGTCCCACCATGGTCTCCACAG...CGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCATGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCCTGTGGAGACCATGGTaGGACGGGTCGGGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: EHCRACRGEEEADPPRPSLWRPW*DGSGRV
Trigger: GACTCTCCCCGACCCGTCCCACCATGGTCTCCACAG...GGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGCTGGCCTGTGGAGACCATGGTaGGACGGGTCGGGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: GGRSTQAFLLTVRKGEAGLWRPW*DGSGRV
Trigger: GACTCTCCCCGACCCGTCCCACCATGGTCTCCACAG...GCCAGCCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp CCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCTGTCGGGAGTGCTGTaGAGACCATGGTGGGACGGG +
Preference number: 4 (lower is better)
Translates to: PSEHCRACRGEEEADPPRLSGVL*RPWWDG
Trigger: CCCGTCCCACCATGGTCTCCACAGCACTCCCGACAG...CCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACTCACTAGCACTGCCCTaGCAGAGTGAGGGTGTGCGG +
Preference number: 4 (lower is better)
Translates to: AGPAGVKRRPIHPGLPAHSLALP*QSEGVR
Trigger: CCGCACACCCTCACTCTGCCAGGGCAGTGCTAGTGA...GTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp TGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACTCCCGTCTGACCCGTTaGAGGGCCGGCTCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: WSQANTAGPAGVKRRPIHSRLTR*RAGSSS
Trigger: AGAACTGGAGCCGGCCCTTCAACGGGTCAGACGGGA...GTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp AGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCATCCCGTCTGACCCGTTaGAGGGCCGGCTCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: SQANTAGPAGVKRRPIHPSRLTR*RAGSSS
Trigger: AGAACTGGAGCCGGCCCTTCAACGGGTCAGACGGGA...TGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp AGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCACGGCCACTGCGAGGCTaGCGATCAGGTAGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: SQANTAGPAGVKRRPIHPRPLRG*RSGSWW
Trigger: CCACCAACTACCTGATCGTCAGCCTCGCAGTGGCCG...TGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp AGGAGCATGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCCGGCCACTGCGAGGCTaGCGATCAGGTAGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: RSMEPSEHCRACRGEEEARPLRG*RSGSWW
Trigger: CCACCAACTACCTGATCGTCAGCCTCGCAGTGGCCG...GGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCATGCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp GCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTAGACAACCCAGGGCATaGCCAGTGTGGCGACGAGGA +
Preference number: 4 (lower is better)
Translates to: ANTAGPAGVKRRPIHPGLRQPRA*PVWRRG
Trigger: TCCTCGTCGCCACACTGGTCATGCCCTGGGTTGTCT...AAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp GGAGCATGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGAGACAACCCAGGGCATaGCCAGTGTGGCGACGAGGA +
Preference number: 4 (lower is better)
Translates to: GAWSQANTAGPAGVKRRPRQPRA*PVWRRG
Trigger: TCCTCGTCGCCACACTGGTCATGCCCTGGGTTGTCT...CGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCATGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp GATACATTGCAGGGCCGTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTCCCACGGTTCGCAAGGGTaGGGCTGGCCGGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: DTLQGRQKAAGWARPRSSHGSQG*GWPAWA
Trigger: TGCCCAGGCCGGCCAGCCTCACCCTTGCGAACCGTG...GGAACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGACGGCCCTGCAATGTATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp GGGATACATTGCAGGGCCGTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTCAGGGCCTGCCGGGGTaGAGAGGAGGCCGATCCACC +
Preference number: 4 (lower is better)
Translates to: GIHCRAVRRQQGGLGQGVQGLPG*RGGRST
Trigger: GGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTG...AACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGACGGCCCTGCAATGTATCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp GAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCGGGCCTTGCAGGGTGTaGACTGTCCATCTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: EHCRACRGEEEADPPRPSGPCRV*TVHLSP
Trigger: TGGGGAGAGATGGACAGTTCACACCCTGCAAGGCCC...GGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp GTTGCCTGGCTCCTCGGCAAGAGAGCTTGCTTGCCTCCTGTGGGCCTTGCAGGGGGAGCTGTAACGGGGTaGGGTGGGTCCGGACTAGCC +
Preference number: 4 (lower is better)
Translates to: VAWLLGKRACLPPVGLAGGAVTG*GGSGLA
Trigger: GGCTAGTCCGGACCCACCTCACCCCGTTACAGCTCC...CCCTGCAAGGCCCACAGGAGGCAAGCAAGCTCTCTTGCCGAGGAGCCAGGCAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp GCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGACACAAGGTGTCAGTaGGAGGGCCTCTTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: AGPAGVKRRPIHPGLPAHDTRCQ*EGLLQR
Trigger: CCTCTGCAAGAGGCCCTCTCACTGACACCTTGTGTC...GTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542968.5
CDS-3UTR GCA 90 bp GGAGCATGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGGAGGAGGTCGGCCACTaGGAGGCTGACGATCAGGTA +
Preference number: 4 (lower is better)
Translates to: GAWSQANTAGPAGVKRRPEEVGH*EADDQV
Trigger: TACCTGATCGTCAGCCTCGCAGTGGCCGACCTCCTC...CGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCATGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp CAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGCTGGCCGGCCTGGGCAGGGATCTCGGGTGGGCTGGTaGTGGAGAGCATCTCCATCT +
Preference number: 4 (lower is better)
Translates to: QAFLLTVRKGEAGRPGQGSRVGW*WRASPS
Trigger: AGATGGAGATGCTCTCCAGCACCAGCCCACCCGAGA...TCCCTGCCCAGGCCGGCCAGCCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp GAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGCGGGGCTGTCGGGAGTaGTGTGGAGACCATGGTGGG +
Preference number: 4 (lower is better)
Translates to: EEEADPPRPSCSRFARVRRGCRE*CGDHGG
Trigger: CCCACCATGGTCTCCACAGCACTCCCGACAGCCCCG...CCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp GTTGCCTGGCTCCTCGGCAAGAGAGCTTGCTTGCCTCCTGTGGGCCTTGCAGGGCGGGGCTGTCGGGAGTaGTGTGGAGACCATGGTGGG +
Preference number: 4 (lower is better)
Translates to: VAWLLGKRACLPPVGLAGRGCRE*CGDHGG
Trigger: CCCACCATGGTCTCCACAGCACTCCCGACAGCCCCG...CCCTGCAAGGCCCACAGGAGGCAAGCAAGCTCTCTTGCCGAGGAGCCAGGCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp GCAGTGAGGAGCATGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAACACTGCAGGGCCTaGCGGGGTGAAGAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: AVRSMEPSEHCRACRGEEEHCRA*RGEEEA
Trigger: GGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTC...CTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCATGCTCCTCACTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp GGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGGAGCCAAGCGAACACTaGAGGGCCTGCCGGGGTGAA +
Preference number: 4 (lower is better)
Translates to: GVKRRPIHPGLPAHGSQGEPSEH*RACRGE
Trigger: TTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTC...CCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GTGAGGAGCATGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGATCCATCAGGGCGGTaGAGCCACTGGGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: VRSMEPSEHCRACRGEEEDPSGR*SHWVAR
Trigger: CCTGGCCACCCAGTGGCTCCACCGCCCTGATGGATC...CTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCATGCTCCTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACTCAGGTAGTTGGTGGTaGTCTGCAGCGCCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: AGPAGVKRRPIHPGLPAHSGSWW*SAAPSR
Trigger: GCGAGAAGGCGCTGCAGACCACCACCAACTACCTGA...GTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp TGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACAGTGGAGCCCTCAGGTaGGCCCTGAAAGCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: WSQANTAGPAGVKRRPIHSGALR*ALKARL
Trigger: CAGCCGAGCTTTCAGGGCCCACCTGAGGGCTCCACT...GTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCCGGGTGGGCTGGTGCTaGAGAGCATCTCCATCTCCA +
Preference number: 4 (lower is better)
Translates to: EHCRACRGEEEADPPRPSRVGWC*RASPSP
Trigger: TGGAGATGGAGATGCTCTCCAGCACCAGCCCACCCG...GGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GGAGCATGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGCGGGTGGGCTGGTGCTaGAGAGCATCTCCATCTCCA +
Preference number: 4 (lower is better)
Translates to: GAWSQANTAGPAGVKRRPRVGWC*RASPSP
Trigger: TGGAGATGGAGATGCTCTCCAGCACCAGCCCACCCG...CGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCATGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGCCGGGTCCTCTCGGGTaGGCTGGTGCTGGAGAGCAT +
Preference number: 4 (lower is better)
Translates to: EEEADPPRPSCSRFARVRPGPLG*AGAGEH
Trigger: ATGCTCTCCAGCACCAGCCCACCCGAGAGGACCCGG...CCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GCAGTGAGGAGCATGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGCCGGGTCCTCTCGGGTaGGCTGGTGCTGGAGAGCAT +
Preference number: 4 (lower is better)
Translates to: AVRSMEPSEHCRACRGEEPGPLG*AGAGEH
Trigger: ATGCTCTCCAGCACCAGCCCACCCGAGAGGACCCGG...CTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCATGCTCCTCACTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGCTGTCGGGGAGAGTCAGCTaGTGGTGGCTGGGTGGGATG +
Preference number: 4 (lower is better)
Translates to: EEADPPRPSCSRFARVRLSGRVS*WWLGGM
Trigger: CATCCCACCCAGCCACCACCAGCTGACTCTCCCCGA...CAGCCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp AACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTTCGGGGAGAGTCAGCTaGTGGTGGCTGGGTGGGATG +
Preference number: 4 (lower is better)
Translates to: NTAGPAGVKRRPIHPGLPSGRVS*WWLGGM
Trigger: CATCCCACCCAGCCACCACCAGCTGACTCTCCCCGA...AGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp AGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCACTGTGGAGACCATGGTaGGACGGGTCGGGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: SQANTAGPAGVKRRPIHPLWRPW*DGSGRV
Trigger: GACTCTCCCCGACCCGTCCCACCATGGTCTCCACAG...TGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACCATTCTTCTCTGGTTTaGCGGGGCTGTCGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: AGPAGVKRRPIHPGLPAHHSSLV*RGCREC
Trigger: GCACTCCCGACAGCCCCGCCAAACCAGAGAAGAATG...GTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp GCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACTCTGGTCTGCGTTATTaGGTCCGAAGAGGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: AGPAGVKRRPIHPGLPAHSGLRY*VRRGVG
Trigger: GCCCACTCCTCTTCGGACTCAATAACGCAGACCAGA...GTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp CAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGCTGGCCGGCCTGGGCAGGGATCTGGTCTGCGTTATTaGGTCCGAAGAGGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: QAFLLTVRKGEAGRPGQGSGLRY*VRRGVG
Trigger: GCCCACTCCTCTTCGGACTCAATAACGCAGACCAGA...TCCCTGCCCAGGCCGGCCAGCCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp CCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGAGGCCGGGTTGGCAATaGTGCACTCGTTCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: PSEHCRACRGEEEADPPRRPGWQ*CTRSGL
Trigger: CAGACCAGAACGAGTGCATCATTGCCAACCCGGCCT...CCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp GAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCAGGCCGGGTTGGCAATaGTGCACTCGTTCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: EHCRACRGEEEADPPRPSRPGWQ*CTRSGL
Trigger: CAGACCAGAACGAGTGCATCATTGCCAACCCGGCCT...GGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp AGGAGCATGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCTGCTGCGTTTGGTGTTaGCTCGCTTGCGGCGTCTGC +
Preference number: 4 (lower is better)
Translates to: RSMEPSEHCRACRGEEEACCVWC*LACGVC
Trigger: GCAGACGCCGCAAGCGAGTCAACACCAAACGCAGCA...GGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCATGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp GAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGCTGTGCTGCGTTTGGTGTTaGCTCGCTTGCGGCGTCTGC +
Preference number: 4 (lower is better)
Translates to: EEADPPRPSCSRFARVRLCCVWC*LACGVC
Trigger: GCAGACGCCGCAAGCGAGTCAACACCAAACGCAGCA...CAGCCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp GGACTGAAGTTGCCTGGCTCCTCGGCAAGAGAGCTTGCTTGCCTCCTGTGGGCCCCCTCAGGTGGGCCCTaGAAGCTCGGCTGCTGCGTT +
Preference number: 4 (lower is better)
Translates to: GLKLPGSSARELACLLWAPSGGP*KLGCCV
Trigger: AACGCAGCAGCCGAGCTTTCAGGGCCCACCTGAGGG...GGCCCACAGGAGGCAAGCAAGCTCTCTTGCCGAGGAGCCAGGCAACTTCAGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp GGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGCATAGCCCAGCCACGTaGAGGCGCTGTACAGGACAG +
Preference number: 4 (lower is better)
Translates to: GVKRRPIHPGLPAHGSQGHSPAT*RRCTGQ
Trigger: CTGTCCTGTACAGCGCCTTCACGTGGCTGGGCTATG...CCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp AGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCACATAGCCCAGCCACGTaGAGGCGCTGTACAGGACAG +
Preference number: 4 (lower is better)
Translates to: SQANTAGPAGVKRRPIHPHSPAT*RRCTGQ
Trigger: CTGTCCTGTACAGCGCCTTCACGTGGCTGGGCTATG...TGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp GAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGCTGGGGCCTTGCAGGGTGTaGACTGTCCATCTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: EEADPPRPSCSRFARVRLGPCRV*TVHLSP
Trigger: TGGGGAGAGATGGACAGTTCACACCCTGCAAGGCCC...CAGCCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp AGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGGCCTTGCAGGGTGTaGACTGTCCATCTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: SQANTAGPAGVKRRPIHPGPCRV*TVHLSP
Trigger: TGGGGAGAGATGGACAGTTCACACCCTGCAAGGCCC...TGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp GGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTGGCCAGCATGTGCTGTaGGAAGGGATACATTGCAGG +
Preference number: 4 (lower is better)
Translates to: GPAGVKRRPIHPGLPAHGGQHVL*EGIHCR
Trigger: CCTGCAATGTATCCCTTCTCACAGCACATGCTGGCC...ACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp AGGAGCATGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCCCCTCAAAGAACCTCTaGTGTCCCCTAGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: RSMEPSEHCRACRGEEEAPSKNL*CPLAQA
Trigger: GGCCTGGGCTAGGGGACATCAGAGGTTCTTTGAGGG...GGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCATGCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000544518.5
CDS-3UTR GCA 90 bp GAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCGGGAGGTCCGGGTTTTaGCATTGGGCATGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: EHCRACRGEEEADPPRPSGRSGF*HWAWSG
Trigger: TCCAGACCATGCCCAATGGCAAAACCCGGACCTCCC...GGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp GTGAGGAGCATGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGAGCCAAGCGAACACTaGAGGGCCTGCCGGGGTGAA +
Preference number: 4 (lower is better)
Translates to: VRSMEPSEHCRACRGEEEEPSEH*RACRGE
Trigger: TTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTC...CTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCATGCTCCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp GGAGCATGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGCTCGGCAAGAGAGCTTaGTTGCCTCCTGTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: GAWSQANTAGPAGVKRRPLGKRA*LPPVGL
Trigger: AAGGCCCACAGGAGGCAAGCAAGCTCTCTTGCCGAG...CGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCATGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp GGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGCTGGCCTCGGCAAGAGAGCTTaGTTGCCTCCTGTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: GGRSTQAFLLTVRKGEAGLGKRA*LPPVGL
Trigger: AAGGCCCACAGGAGGCAAGCAAGCTCTCTTGCCGAG...GCCAGCCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp GGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGCTGGCAGGTCCACATCGGGGTaGGGGAGGGAGCTAAGGTTT +
Preference number: 4 (lower is better)
Translates to: GGRSTQAFLLTVRKGEAGRSTSG*GRELRF
Trigger: AAACCTTAGCTCCCTCCCGCACCCCGATGTGGACCT...GCCAGCCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGCTGGGTGGAGCCACTGGGTaGCCAGGCTCTTCAAGCCAT +
Preference number: 4 (lower is better)
Translates to: EEADPPRPSCSRFARVRLGGATG*PGSSSH
Trigger: ATGGCTTGAAGAGCCTGGCCACCCAGTGGCTCCACC...CAGCCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346454.7
ENST00000362072.8
CDS-3UTR CCA 90 bp AGGGCCAGGCCAGGCCAGATGGTTTTCAGCAGCCTCTTAGCCGTGGGCTCCTCTGATCCATCAGGGCGGTaGAGCCACTGGGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RARPGQMVFSSLLAVGSSDPSGR*SHWVAR
Trigger: CCTGGCCACCCAGTGGCTCCACCGCCCTGATGGATC...AGAGGAGCCCACGGCTAAGAGGCTGCTGAAAACCATCTGGCCTGGCCTGGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000544518.5
CDS-3UTR CCA 90 bp CAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGCTGGCCGGCCTGGGCAGGGACCAGGACAGATTCAGTaGATCCATCAGGGCGGTGGA +
Preference number: 4 (lower is better)
Translates to: QAFLLTVRKGEAGRPGQGPGQIQ*IHQGGG
Trigger: TCCACCGCCCTGATGGATCCACTGAATCTGTCCTGG...TCCCTGCCCAGGCCGGCCAGCCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTTCAGGTAGTTGGTGGTaGTCTGCAGCGCCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: ANTAGPAGVKRRPIHPGLSGSWW*SAAPSR
Trigger: GCGAGAAGGCGCTGCAGACCACCACCAACTACCTGA...AAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp AGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGGAGTCCGAAGAGGAGTaGGCAGGAGATGGTGAAGGA +
Preference number: 4 (lower is better)
Translates to: RACRGEEEADPPRPSCSRESEEE*AGDGEG
Trigger: TCCTTCACCATCTCCTGCCCACTCCTCTTCGGACTC...CCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp AACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTTCCTCTCGGGTGGGCTaGTGCTGGAGAGCATCTCCA +
Preference number: 4 (lower is better)
Translates to: NTAGPAGVKRRPIHPGLPSSRVG*CWRASP
Trigger: TGGAGATGCTCTCCAGCACCAGCCCACCCGAGAGGA...AGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GCAGTGAGGAGCATGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGTCGGGGAGAGTCAGCTaGTGGTGGCTGGGTGGGATG +
Preference number: 4 (lower is better)
Translates to: AVRSMEPSEHCRACRGEESGRVS*WWLGGM
Trigger: CATCCCACCCAGCCACCACCAGCTGACTCTCCCCGA...CTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCATGCTCCTCACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCCATTCTTCTCTGGTTTaGCGGGGCTGTCGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: EHCRACRGEEEADPPRPSHSSLV*RGCREC
Trigger: GCACTCCCGACAGCCCCGCCAAACCAGAGAAGAATG...GGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTATGCCCATTCTTCTCTaGTTTGGCGGGGCTGTCGGG +
Preference number: 4 (lower is better)
Translates to: ANTAGPAGVKRRPIHPGLMPILL*FGGAVG
Trigger: CCCGACAGCCCCGCCAAACCAGAGAAGAATGGGCAT...AAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp TGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACTCACTAGCACTGCCCTaGCAGAGTGAGGGTGTGCGG +
Preference number: 4 (lower is better)
Translates to: WSQANTAGPAGVKRRPIHSLALP*QSEGVR
Trigger: CCGCACACCCTCACTCTGCCAGGGCAGTGCTAGTGA...GTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp CAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGCTGGCCGGCCTGGGCAGGGAAGAAAACTCAGCCTCTaGGCCCTGACTCAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: QAFLLTVRKGEAGRPGQGRKLSL*ALTQAP
Trigger: TGGAGCCTGAGTCAGGGCCCAGAGGCTGAGTTTTCT...TCCCTGCCCAGGCCGGCCAGCCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCTTGCTTGCCTCCTGTaGGCCTTGCAGGGTGTGAAC +
Preference number: 4 (lower is better)
Translates to: ANTAGPAGVKRRPIHPGLLACLL*ALQGVN
Trigger: GTTCACACCCTGCAAGGCCCACAGGAGGCAAGCAAG...AAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp CAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGCTGGCCGGCCTGGGCAGGGAAGGACTGAAGTTGCCTaGCTCCTCGGCAAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: QAFLLTVRKGEAGRPGQGRTEVA*LLGKRA
Trigger: AGCTCTCTTGCCGAGGAGCCAGGCAACTTCAGTCCT...TCCCTGCCCAGGCCGGCCAGCCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp GCTAGGCCAAGGAGTTCCTCTCCCCATAGACCCTCCTGGGCCCTTCAAGATGAGGTCCGCCTTCCCGTCTaGCCCGTTGAAGGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: ARPRSSSPHRPSWALQDEVRLPV*PVEGPA
Trigger: AGCCGGCCCTTCAACGGGTCAGACGGGAAGGCGGAC...CTCATCTTGAAGGGCCCAGGAGGGTCTATGGGGAGAGGAACTCCTTGGCCTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp GGACTGAAGTTGCCTGGCTCCTCGGCAAGAGAGCTTGCTTGCCTCCTGTGGGCCCGGCCACTGCGAGGCTaGCGATCAGGTAGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: GLKLPGSSARELACLLWARPLRG*RSGSWW
Trigger: CCACCAACTACCTGATCGTCAGCCTCGCAGTGGCCG...GGCCCACAGGAGGCAAGCAAGCTCTCTTGCCGAGGAGCCAGGCAACTTCAGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp GGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGAGGCCGGGTTGGCAATaGTGCACTCGTTCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: GVKRRPIHPGLPAHGSQGRPGWQ*CTRSGL
Trigger: CAGACCAGAACGAGTGCATCATTGCCAACCCGGCCT...CCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp AGGGATACATTGCAGGGCCGTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTCCCTCAGGTGGGCCCTaGAAGCTCGGCTGCTGCGTT +
Preference number: 4 (lower is better)
Translates to: RDTLQGRQKAAGWARPRSPSGGP*KLGCCV
Trigger: AACGCAGCAGCCGAGCTTTCAGGGCCCACCTGAGGG...ACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGACGGCCCTGCAATGTATCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp AACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTTACGGCTCATGGTCTTaGGGGAGGTCCGGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: NTAGPAGVKRRPIHPGLPYGSWS*GRSGFC
Trigger: GCAAAACCCGGACCTCCCTCAAGACCATGAGCCGTA...AGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp CGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGTACGGCTCATGGTCTTaGGGGAGGTCCGGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: RGEEEADPPRPSCSRFARYGSWS*GRSGFC
Trigger: GCAAAACCCGGACCTCCCTCAAGACCATGAGCCGTA...CCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp CCTGTGGGCCTTGCAGGGTGTGAACTGTCCATCTCTCCCCACCGCCTGCTCCACCATAGCCCAGCCACGTaGAGGCGCTGTACAGGACAG +
Preference number: 4 (lower is better)
Translates to: PVGLAGCELSISPHRLLHHSPAT*RRCTGQ
Trigger: CTGTCCTGTACAGCGCCTTCACGTGGCTGGGCTATG...GTGGAGCAGGCGGTGGGGAGAGATGGACAGTTCACACCCTGCAAGGCCCACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp GTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTCCTCTCCCCATAGACCCTAGGGTGTGCGGGCAGTaGGGAGCATGGAGCCAAGCG +
Preference number: 4 (lower is better)
Translates to: VRRQQGGLGQGVPLPIDPRVCGQ*GAWSQA
Trigger: CGCTTGGCTCCATGCTCCTCACTGCCCGCACACCCT...AGGGTCTATGGGGAGAGGAACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp GCAGTGAGGAGCATGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGGGCCTTGCAGGGTGTaGACTGTCCATCTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: AVRSMEPSEHCRACRGEEGPCRV*TVHLSP
Trigger: TGGGGAGAGATGGACAGTTCACACCCTGCAAGGCCC...CTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCATGCTCCTCACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp AGGGATACATTGCAGGGCCGTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTGGAGCTGTAACGGGGTaGGGTGGGTCCGGACTAGCC +
Preference number: 4 (lower is better)
Translates to: RDTLQGRQKAAGWARPRSGAVTG*GGSGLA
Trigger: GGCTAGTCCGGACCCACCTCACCCCGTTACAGCTCC...ACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGACGGCCCTGCAATGTATCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp GGAGCATGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGGGCCAGCATGTGCTGTaGGAAGGGATACATTGCAGG +
Preference number: 4 (lower is better)
Translates to: GAWSQANTAGPAGVKRRPGQHVL*EGIHCR
Trigger: CCTGCAATGTATCCCTTCTCACAGCACATGCTGGCC...CGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCATGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp GCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTGGCCAGCATGTGCTGTaGGAAGGGATACATTGCAGG +
Preference number: 4 (lower is better)
Translates to: ANTAGPAGVKRRPIHPGLGQHVL*EGIHCR
Trigger: CCTGCAATGTATCCCTTCTCACAGCACATGCTGGCC...AAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp GGAGCATGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGGGCCGGCTCCAGTTCTaGCTCTCCAGATCATCATCA +
Preference number: 4 (lower is better)
Translates to: GAWSQANTAGPAGVKRRPGRLQF*LSRSSS
Trigger: TGATGATGATCTGGAGAGGCAGAACTGGAGCCGGCC...CGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCATGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp GCCGTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTCCTCTCCCCATAGACCGCGGGACACAGCCATaGACACCAGCACGTTGCCGA +
Preference number: 4 (lower is better)
Translates to: AVRRQQGGLGQGVPLPIDRGTQP*TPARCR
Trigger: TCGGCAACGTGCTGGTGTGCATGGCTGTGTCCCGCG...GTCTATGGGGAGAGGAACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGACGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp CCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCTCGCTTGCGGCGTCTaGGGAGGACAATGTAGATCT +
Preference number: 4 (lower is better)
Translates to: PSEHCRACRGEEEADPPRLACGV*GGQCRS
Trigger: AGATCTACATTGTCCTCCGCAGACGCCGCAAGCGAG...CCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp GAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCCTCGCTTGCGGCGTCTaGGGAGGACAATGTAGATCT +
Preference number: 4 (lower is better)
Translates to: EHCRACRGEEEADPPRPSLACGV*GGQCRS
Trigger: AGATCTACATTGTCCTCCGCAGACGCCGCAAGCGAG...GGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp TGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACTCTCGGGTGGGCTGGTaGTGGAGAGCATCTCCATCT +
Preference number: 4 (lower is better)
Translates to: WSQANTAGPAGVKRRPIHSRVGW*WRASPS
Trigger: AGATGGAGATGCTCTCCAGCACCAGCCCACCCGAGA...GTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp AACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTTCTCGGGTGGGCTGGTaGTGGAGAGCATCTCCATCT +
Preference number: 4 (lower is better)
Translates to: NTAGPAGVKRRPIHPGLPSRVGW*WRASPS
Trigger: AGATGGAGATGCTCTCCAGCACCAGCCCACCCGAGA...AGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp AGGGATACATTGCAGGGCCGTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTCGGGGCTGTCGGGAGTaGTGTGGAGACCATGGTGGG +
Preference number: 4 (lower is better)
Translates to: RDTLQGRQKAAGWARPRSRGCRE*CGDHGG
Trigger: CCCACCATGGTCTCCACAGCACTCCCGACAGCCCCG...ACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGACGGCCCTGCAATGTATCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp GAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGCTGGGGAGGTCCGGGTTTTaGCATTGGGCATGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: EEADPPRPSCSRFARVRLGRSGF*HWAWSG
Trigger: TCCAGACCATGCCCAATGGCAAAACCCGGACCTCCC...CAGCCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp AGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGGAGGTCCGGGTTTTaGCATTGGGCATGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: SQANTAGPAGVKRRPIHPGRSGF*HWAWSG
Trigger: TCCAGACCATGCCCAATGGCAAAACCCGGACCTCCC...TGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCGATCAGGTAGTTGGTaGTGGTCTGCAGCGCCTTCT +
Preference number: 4 (lower is better)
Translates to: ANTAGPAGVKRRPIHPGLRSGSW*WSAAPS
Trigger: AGAAGGCGCTGCAGACCACCACCAACTACCTGATCG...AAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GCCGTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTCCTCTCCCCATAGACAGTGGAGCCCTCAGGTaGGCCCTGAAAGCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: AVRRQQGGLGQGVPLPIDSGALR*ALKARL
Trigger: CAGCCGAGCTTTCAGGGCCCACCTGAGGGCTCCACT...GTCTATGGGGAGAGGAACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGACGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp AGGGATACATTGCAGGGCCGTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTCCGGGTCCTCTCGGGTaGGCTGGTGCTGGAGAGCAT +
Preference number: 4 (lower is better)
Translates to: RDTLQGRQKAAGWARPRSPGPLG*AGAGEH
Trigger: ATGCTCTCCAGCACCAGCCCACCCGAGAGGACCCGG...ACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGACGGCCCTGCAATGTATCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GGACTGAAGTTGCCTGGCTCCTCGGCAAGAGAGCTTGCTTGCCTCCTGTGGGCCCTGTCGGGAGTGCTGTaGAGACCATGGTGGGACGGG +
Preference number: 4 (lower is better)
Translates to: GLKLPGSSARELACLLWALSGVL*RPWWDG
Trigger: CCCGTCCCACCATGGTCTCCACAGCACTCCCGACAG...GGCCCACAGGAGGCAAGCAAGCTCTCTTGCCGAGGAGCCAGGCAACTTCAGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGCTGATGCCCATTCTTCTCTaGTTTGGCGGGGCTGTCGGG +
Preference number: 4 (lower is better)
Translates to: EEADPPRPSCSRFARVRLMPILL*FGGAVG
Trigger: CCCGACAGCCCCGCCAAACCAGAGAAGAATGGGCAT...CAGCCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp CAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGCTGGCCGGCCTGGGCAGGGATTCTTCTCCTTCTGCTaGGAGAGCTTCCTACGGCTC +
Preference number: 4 (lower is better)
Translates to: QAFLLTVRKGEAGRPGQGFFSFC*ESFLRL
Trigger: GAGCCGTAGGAAGCTCTCCCAGCAGAAGGAGAAGAA...TCCCTGCCCAGGCCGGCCAGCCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTTCTTCTCCTTCTGCTaGGAGAGCTTCCTACGGCTC +
Preference number: 4 (lower is better)
Translates to: GPAGVKRRPIHPGLPAHGFFSFC*ESFLRL
Trigger: GAGCCGTAGGAAGCTCTCCCAGCAGAAGGAGAAGAA...ACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACTTCTTCTCCTTCTGCTaGGAGAGCTTCCTACGGCTC +
Preference number: 4 (lower is better)
Translates to: AGPAGVKRRPIHPGLPAHFFSFC*ESFLRL
Trigger: GAGCCGTAGGAAGCTCTCCCAGCAGAAGGAGAAGAA...GTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp CAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGCTGGCCGGCCTGGGCAGGGAACACGCCGAGAACAATaGCGAGCATCTGAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: QAFLLTVRKGEAGRPGQGTRREQ*RASEWL
Trigger: AAGCCACTCAGATGCTCGCCATTGTTCTCGGCGTGT...TCCCTGCCCAGGCCGGCCAGCCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGCTGCTTGCTTGCCTCCTGTaGGCCTTGCAGGGTGTGAAC +
Preference number: 4 (lower is better)
Translates to: EEADPPRPSCSRFARVRLLACLL*ALQGVN
Trigger: GTTCACACCCTGCAAGGCCCACAGGAGGCAAGCAAG...CAGCCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp AGGAGCATGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCCTTGCTTGCCTCCTGTaGGCCTTGCAGGGTGTGAAC +
Preference number: 4 (lower is better)
Translates to: RSMEPSEHCRACRGEEEALACLL*ALQGVN
Trigger: GTTCACACCCTGCAAGGCCCACAGGAGGCAAGCAAG...GGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCATGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp CCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGAGGACTGAAGTTGCCTaGCTCCTCGGCAAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: PSEHCRACRGEEEADPPRRTEVA*LLGKRA
Trigger: AGCTCTCTTGCCGAGGAGCCAGGCAACTTCAGTCCT...CCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp CCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGTGGCTTGGGAATCTCTaGGGTCCAACCTGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: PSEHCRACRGEEEADPPRWLGNL*GPTCSL
Trigger: CAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCA...CCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp CAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTCCTCTCCCCATAGACCCTCCAGACAACCCAGGGCATaGCCAGTGTGGCGACGAGGA +
Preference number: 4 (lower is better)
Translates to: QKAAGWARPRSSSPHRPSRQPRA*PVWRRG
Trigger: TCCTCGTCGCCACACTGGTCATGCCCTGGGTTGTCT...GGAGGGTCTATGGGGAGAGGAACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp GGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTGTACCTGTCGATGCTaGTGGCACACAAGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: GPAGVKRRPIHPGLPAHGCTCRC*WHTSSG
Trigger: TCCTGAACTTGTGTGCCATCAGCATCGACAGGTACA...ACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp TGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACTCTGGTCTGCGTTATTaGGTCCGAAGAGGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: WSQANTAGPAGVKRRPIHSGLRY*VRRGVG
Trigger: GCCCACTCCTCTTCGGACTCAATAACGCAGACCAGA...GTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp GCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACACAATGGCGAGCATCTaGGTGGCTTTCTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: AGPAGVKRRPIHPGLPAHTMASI*VAFFSF
Trigger: GAAGGAGAAGAAAGCCACTCAGATGCTCGCCATTGT...GTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp CAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGCTGGCCGGCCTGGGCAGGGAACAATGGCGAGCATCTaGGTGGCTTTCTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: QAFLLTVRKGEAGRPGQGTMASI*VAFFSF
Trigger: GAAGGAGAAGAAAGCCACTCAGATGCTCGCCATTGT...TCCCTGCCCAGGCCGGCCAGCCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp GGGGTCCAACCTGCAGTCTGGTATTTACATGGGTCTCCCAGGACTGAAGTTGCCCACGGTTCGCAAGGGTaGGGCTGGCCGGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: GVQPAVWYLHGSPRTEVAHGSQG*GWPAWA
Trigger: TGCCCAGGCCGGCCAGCCTCACCCTTGCGAACCGTG...GGCAACTTCAGTCCTGGGAGACCCATGTAAATACCAGACTGCAGGTTGGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp GAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGCTGGGCCAGCATGTGCTGTaGGAAGGGATACATTGCAGG +
Preference number: 4 (lower is better)
Translates to: EEADPPRPSCSRFARVRLGQHVL*EGIHCR
Trigger: CCTGCAATGTATCCCTTCTCACAGCACATGCTGGCC...CAGCCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp TTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTTACATGGGTCTCGGCGCGGTGCGCGCGTaGGGCTGCCGGTTCGGCACT +
Preference number: 4 (lower is better)
Translates to: LAWESLGSNLQSGIYMGLGAVRA*GCRFGT
Trigger: AGTGCCGAACCGGCAGCCTCACGCGCGCACCGCGCC...GAGACCCATGTAAATACCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362072.8
CDS-3UTR GCA 90 bp CGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGCTCGCTTGCGGCGTCTaGGGAGGACAATGTAGATCT +
Preference number: 4 (lower is better)
Translates to: RGEEEADPPRPSCSRFARLACGV*GGQCRS
Trigger: AGATCTACATTGTCCTCCGCAGACGCCGCAAGCGAG...CCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp CCAGCAACCCTAGAGCCCCAGAGGAAGGTCAAGGAAGGCGGCTGCATCTTTGGTCGGGGCTGTCGGGAGTaGTGTGGAGACCATGGTGGG +
Preference number: 4 (lower is better)
Translates to: PATLEPQRKVKEGGCIFGRGCRE*CGDHGG
Trigger: CCCACCATGGTCTCCACAGCACTCCCGACAGCCCCG...ACCAAAGATGCAGCCGCCTTCCTTGACCTTCCTCTGGGGCTCTAGGGTTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp GCAGTGAGGAGCATGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGGGAGGTCCGGGTTTTaGCATTGGGCATGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: AVRSMEPSEHCRACRGEEGRSGF*HWAWSG
Trigger: TCCAGACCATGCCCAATGGCAAAACCCGGACCTCCC...CTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCATGCTCCTCACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp CCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGGCTTTCTTCTCCTTCTaGTGGGAGAGCTTCCTACGG +
Preference number: 4 (lower is better)
Translates to: PSEHCRACRGEEEADPPRAFFSF*WESFLR
Trigger: CCGTAGGAAGCTCTCCCAGCAGAAGGAGAAGAAAGC...CCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp CAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGCTGGCCGGCCTGGGCAGGGAGGACAGGCGGGATGTTaGAGTCACAGTGTATGTTCA +
Preference number: 4 (lower is better)
Translates to: QAFLLTVRKGEAGRPGQGGQAGC*SHSVCS
Trigger: TGAACATACACTGTGACTGCAACATCCCGCCTGTCC...TCCCTGCCCAGGCCGGCCAGCCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp GGGATACATTGCAGGGCCGTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTGAGCCAAGCGAACACTaGAGGGCCTGCCGGGGTGAA +
Preference number: 4 (lower is better)
Translates to: GIHCRAVRRQQGGLGQGVEPSEH*RACRGE
Trigger: TTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTC...AACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGACGGCCCTGCAATGTATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp TCAGGCTCCAGCAACCCTAGAGCCCCAGAGGAAGGTCAAGGAAGGCGGCTGCATGAGCCAAGCGAACACTaGAGGGCCTGCCGGGGTGAA +
Preference number: 4 (lower is better)
Translates to: SGSSNPRAPEEGQGRRLHEPSEH*RACRGE
Trigger: TTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTC...ATGCAGCCGCCTTCCTTGACCTTCCTCTGGGGCTCTAGGGTTGCTGGAGCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp CCTGTGGGCCTTGCAGGGTGTGAACTGTCCATCTCTCCCCACCGCCTGCTCCACCTCGGCAAGAGAGCTTaGTTGCCTCCTGTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: PVGLAGCELSISPHRLLHLGKRA*LPPVGL
Trigger: AAGGCCCACAGGAGGCAAGCAAGCTCTCTTGCCGAG...GTGGAGCAGGCGGTGGGGAGAGATGGACAGTTCACACCCTGCAAGGCCCACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp GCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACCTCTGGGGTCCAACCTaGAGTCTGGTATTTACATGG +
Preference number: 4 (lower is better)
Translates to: AGPAGVKRRPIHPGLPAHLWGPT*SLVFTW
Trigger: CCATGTAAATACCAGACTGCAGGTTGGACCCCAGAG...GTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp CCAGCAACCCTAGAGCCCCAGAGGAAGGTCAAGGAAGGCGGCTGCATCTTTGGTAGAGACGGCGCCGGCTaGTTGAGGCTTCCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: PATLEPQRKVKEGGCIFGRDGAG*LRLPAP
Trigger: GGGAGCTGGAAGCCTCAAGCAGCCGGCGCCGTCTCT...ACCAAAGATGCAGCCGCCTTCCTTGACCTTCCTCTGGGGCTCTAGGGTTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362072.8
CDS-3UTR CCA 90 bp CGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGCCAGGACAGATTCAGTaGATCCATCAGGGCGGTGGA +
Preference number: 4 (lower is better)
Translates to: RGEEEADPPRPSCSRFARPGQIQ*IHQGGG
Trigger: TCCACCGCCCTGATGGATCCACTGAATCTGTCCTGG...CCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp AGGAGCATGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCCCAGGACAGATTCAGTaGATCCATCAGGGCGGTGGA +
Preference number: 4 (lower is better)
Translates to: RSMEPSEHCRACRGEEEAPGQIQ*IHQGGG
Trigger: TCCACCGCCCTGATGGATCCACTGAATCTGTCCTGG...GGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCATGCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp TGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCGATCAGGTAGTTGGTaGTGGTCTGCAGCGCCTTCT +
Preference number: 4 (lower is better)
Translates to: WSQANTAGPAGVKRRPIHRSGSW*WSAAPS
Trigger: AGAAGGCGCTGCAGACCACCACCAACTACCTGATCG...GTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp TGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACGAGTCCGAAGAGGAGTaGGCAGGAGATGGTGAAGGA +
Preference number: 4 (lower is better)
Translates to: WSQANTAGPAGVKRRPIHESEEE*AGDGEG
Trigger: TCCTTCACCATCTCCTGCCCACTCCTCTTCGGACTC...GTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp CAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTCCTCTCCCCATAGACCCTCCCGGGTGGGCTGGTGCTaGAGAGCATCTCCATCTCCA +
Preference number: 4 (lower is better)
Translates to: QKAAGWARPRSSSPHRPSRVGWC*RASPSP
Trigger: TGGAGATGGAGATGCTCTCCAGCACCAGCCCACCCG...GGAGGGTCTATGGGGAGAGGAACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp AGGGATACATTGCAGGGCCGTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTGTGCTGTGGAGACCATaGTGGGACGGGTCGGGGAGA +
Preference number: 4 (lower is better)
Translates to: RDTLQGRQKAAGWARPRSVLWRP*WDGSGR
Trigger: TCTCCCCGACCCGTCCCACCATGGTCTCCACAGCAC...ACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGACGGCCCTGCAATGTATCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp TCAGGCTCCAGCAACCCTAGAGCCCCAGAGGAAGGTCAAGGAAGGCGGCTGCATCTGTCGGGAGTGCTGTaGAGACCATGGTGGGACGGG +
Preference number: 4 (lower is better)
Translates to: SGSSNPRAPEEGQGRRLHLSGVL*RPWWDG
Trigger: CCCGTCCCACCATGGTCTCCACAGCACTCCCGACAG...ATGCAGCCGCCTTCCTTGACCTTCCTCTGGGGCTCTAGGGTTGCTGGAGCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GTGAGGAGCATGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGATGCCCATTCTTCTCTaGTTTGGCGGGGCTGTCGGG +
Preference number: 4 (lower is better)
Translates to: VRSMEPSEHCRACRGEEEMPILL*FGGAVG
Trigger: CCCGACAGCCCCGCCAAACCAGAGAAGAATGGGCAT...CTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCATGCTCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp CAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGCTGGCCGGCCTGGGCAGGGATTGGCAATCTTGGGGTaGTCTTTGGCATGCCCATTC +
Preference number: 4 (lower is better)
Translates to: QAFLLTVRKGEAGRPGQGLAILG*SLACPF
Trigger: GAATGGGCATGCCAAAGACCACCCCAAGATTGCCAA...TCCCTGCCCAGGCCGGCCAGCCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp AGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTCCGGGTTTTGCCATTaGGCATGGTCTGGATCTCAA +
Preference number: 4 (lower is better)
Translates to: RACRGEEEADPPRPSCSRSGFCH*AWSGSQ
Trigger: TTGAGATCCAGACCATGCCCAATGGCAAAACCCGGA...CCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp CAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGCTGGCCGGCCTGGGCAGGGATGGCGAGCATCTGAGTaGCTTTCTTCTCCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: QAFLLTVRKGEAGRPGQGWRASE*LSSPSA
Trigger: AGCAGAAGGAGAAGAAAGCCACTCAGATGCTCGCCA...TCCCTGCCCAGGCCGGCCAGCCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGCTTGCTTGCCTCCTGTaGGCCTTGCAGGGTGTGAAC +
Preference number: 4 (lower is better)
Translates to: EEEADPPRPSCSRFARVRLACLL*ALQGVN
Trigger: GTTCACACCCTGCAAGGCCCACAGGAGGCAAGCAAG...CCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp AACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTTGGCTTGGGAATCTCTaGGGTCCAACCTGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: NTAGPAGVKRRPIHPGLPWLGNL*GPTCSL
Trigger: CAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCA...AGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp AGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGGTCCGGACTAGCCTaGAAAGTAGAGGTCCACATC +
Preference number: 4 (lower is better)
Translates to: SQANTAGPAGVKRRPIHPGSGLA*KVEVHI
Trigger: GATGTGGACCTCTACTTTCCAGGCTAGTCCGGACCC...TGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp CCAGCAACCCTAGAGCCCCAGAGGAAGGTCAAGGAAGGCGGCTGCATCTTTGGTTCCCGTCTGACCCGTTaGAGGGCCGGCTCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: PATLEPQRKVKEGGCIFGSRLTR*RAGSSS
Trigger: AGAACTGGAGCCGGCCCTTCAACGGGTCAGACGGGA...ACCAAAGATGCAGCCGCCTTCCTTGACCTTCCTCTGGGGCTCTAGGGTTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp GTTTTGCGTCAGAGTGTGGCAGAGGCAGTCCCTCAAAGAACCTCTGATGTCCCCGTCCGCCTTCCCGTCTaGCCCGTTGAAGGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: VLRQSVAEAVPQRTSDVPVRLPV*PVEGPA
Trigger: AGCCGGCCCTTCAACGGGTCAGACGGGAAGGCGGAC...GGGGACATCAGAGGTTCTTTGAGGGACTGCCTCTGCCACACTCTGACGCAAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000544518.5
CDS-3UTR TCA 90 bp AGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGCACAGTGAATCCTGCTaGATTTCCACTCACCTACCA +
Preference number: 4 (lower is better)
Translates to: RACRGEEEADPPRPSCSRHSESC*ISTHLP
Trigger: TGGTAGGTGAGTGGAAATTCAGCAGGATTCACTGTG...CCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
CDS-3UTR TCA 90 bp CAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTCCTCTCCCCATAGACCCTCCAGGCCGGGTTGGCAATaGTGCACTCGTTCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: QKAAGWARPRSSSPHRPSRPGWQ*CTRSGL
Trigger: CAGACCAGAACGAGTGCATCATTGCCAACCCGGCCT...GGAGGGTCTATGGGGAGAGGAACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp GGGATACATTGCAGGGCCGTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTCCCTCAAAGAACCTCTaGTGTCCCCTAGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: GIHCRAVRRQQGGLGQGVPSKNL*CPLAQA
Trigger: GGCCTGGGCTAGGGGACATCAGAGGTTCTTTGAGGG...AACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGACGGCCCTGCAATGTATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000544518.5
CDS-3UTR TCA 90 bp GGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGCTGGCTTCATGTCCTCGGGGTaGGTACAGTTGCCCTTTAGT +
Preference number: 4 (lower is better)
Translates to: GGRSTQAFLLTVRKGEAGFMSSG*VQLPFS
Trigger: ACTAAAGGGCAACTGTACTCACCCCGAGGACATGAA...GCCAGCCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp AGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGCACAGTGAATCCTGCTaGATTTCCACTCACCTACCT +
Preference number: 4 (lower is better)
Translates to: RACRGEEEADPPRPSCSRHSESC*ISTHLP
Trigger: AGGTAGGTGAGTGGAAATTCAGCAGGATTCACTGTG...CCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544518.5
CDS-3UTR GCA 90 bp GTGAGGAGCATGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGGCCGGCTCCAGTTCTaGCTCTCCAGATCATCATCA +
Preference number: 4 (lower is better)
Translates to: VRSMEPSEHCRACRGEEEGRLQF*LSRSSS
Trigger: TGATGATGATCTGGAGAGGCAGAACTGGAGCCGGCC...CTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCATGCTCCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp CCTGTGGGCCTTGCAGGGTGTGAACTGTCCATCTCTCCCCACCGCCTGCTCCACGGCCGGCTCCAGTTCTaGCTCTCCAGATCATCATCA +
Preference number: 4 (lower is better)
Translates to: PVGLAGCELSISPHRLLHGRLQF*LSRSSS
Trigger: TGATGATGATCTGGAGAGGCAGAACTGGAGCCGGCC...GTGGAGCAGGCGGTGGGGAGAGATGGACAGTTCACACCCTGCAAGGCCCACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp GCTAGGCCAAGGAGTTCCTCTCCCCATAGACCCTCCTGGGCCCTTCAAGATGAGCGCGGGACACAGCCATaGACACCAGCACGTTGCCGA +
Preference number: 4 (lower is better)
Translates to: ARPRSSSPHRPSWALQDERGTQP*TPARCR
Trigger: TCGGCAACGTGCTGGTGTGCATGGCTGTGTCCCGCG...CTCATCTTGAAGGGCCCAGGAGGGTCTATGGGGAGAGGAACTCCTTGGCCTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp GCCGTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTCCTCTCCCCATAGACGGGAGGTCCGGGTTTTaGCATTGGGCATGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: AVRRQQGGLGQGVPLPIDGRSGF*HWAWSG
Trigger: TCCAGACCATGCCCAATGGCAAAACCCGGACCTCCC...GTCTATGGGGAGAGGAACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGACGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp GGACTGAAGTTGCCTGGCTCCTCGGCAAGAGAGCTTGCTTGCCTCCTGTGGGCCAGGTCCACATCGGGGTaGGGGAGGGAGCTAAGGTTT +
Preference number: 4 (lower is better)
Translates to: GLKLPGSSARELACLLWARSTSG*GRELRF
Trigger: AAACCTTAGCTCCCTCCCGCACCCCGATGTGGACCT...GGCCCACAGGAGGCAAGCAAGCTCTCTTGCCGAGGAGCCAGGCAACTTCAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp AGGGCCAGGCCAGGCCAGATGGTTTTCAGCAGCCTCTTAGCCGTGGGCTCCTCTAGGTCCACATCGGGGTaGGGGAGGGAGCTAAGGTTT +
Preference number: 4 (lower is better)
Translates to: RARPGQMVFSSLLAVGSSRSTSG*GRELRF
Trigger: AAACCTTAGCTCCCTCCCGCACCCCGATGTGGACCT...AGAGGAGCCCACGGCTAAGAGGCTGCTGAAAACCATCTGGCCTGGCCTGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000544518.5
CDS-3UTR GCA 90 bp GAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCAGGCTGGCCAGCATGTaGTGTGAGAAGGGATACATT +
Preference number: 4 (lower is better)
Translates to: EHCRACRGEEEADPPRPSRLASM*CEKGYI
Trigger: AATGTATCCCTTCTCACAGCACATGCTGGCCAGCCT...GGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GATACATTGCAGGGCCGTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTCCGGTGGAGCCACTGGGTaGCCAGGCTCTTCAAGCCAT +
Preference number: 4 (lower is better)
Translates to: DTLQGRQKAAGWARPRSSGGATG*PGSSSH
Trigger: ATGGCTTGAAGAGCCTGGCCACCCAGTGGCTCCACC...GGAACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGACGGCCCTGCAATGTATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346454.7
ENST00000362072.8
CDS-3UTR CCA 90 bp AGGGCCAGGCCAGGCCAGATGGTTTTCAGCAGCCTCTTAGCCGTGGGCTCCTCTTCAGGTAGTTGGTGGTaGTCTGCAGCGCCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: RARPGQMVFSSLLAVGSSSGSWW*SAAPSR
Trigger: GCGAGAAGGCGCTGCAGACCACCACCAACTACCTGA...AGAGGAGCCCACGGCTAAGAGGCTGCTGAAAACCATCTGGCCTGGCCTGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000544518.5
CDS-3UTR CCA 90 bp GTTGCCTGGCTCCTCGGCAAGAGAGCTTGCTTGCCTCCTGTGGGCCTTGCAGGGCGATCAGGTAGTTGGTaGTGGTCTGCAGCGCCTTCT +
Preference number: 4 (lower is better)
Translates to: VAWLLGKRACLPPVGLAGRSGSW*WSAAPS
Trigger: AGAAGGCGCTGCAGACCACCACCAACTACCTGATCG...CCCTGCAAGGCCCACAGGAGGCAAGCAAGCTCTCTTGCCGAGGAGCCAGGCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GTGAGGAGCATGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGAGTCCGAAGAGGAGTaGGCAGGAGATGGTGAAGGA +
Preference number: 4 (lower is better)
Translates to: VRSMEPSEHCRACRGEEEESEEE*AGDGEG
Trigger: TCCTTCACCATCTCCTGCCCACTCCTCTTCGGACTC...CTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCATGCTCCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp AGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGATGATGCACTCGTTCTaGTCTGCGTTATTGAGTCCG +
Preference number: 4 (lower is better)
Translates to: RACRGEEEADPPRPSCSRMMHSF*SALLSP
Trigger: CGGACTCAATAACGCAGACCAGAACGAGTGCATCAT...CCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp AGGAGCATGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCCGTAGAAGGAGACGATaGAGGAGTAGACCACGAAGG +
Preference number: 4 (lower is better)
Translates to: RSMEPSEHCRACRGEEEARRRRR*RSRPRR
Trigger: CCTTCGTGGTCTACTCCTCCATCGTCTCCTTCTACG...GGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCATGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GATACATTGCAGGGCCGTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTCCCGGGTGGGCTGGTGCTaGAGAGCATCTCCATCTCCA +
Preference number: 4 (lower is better)
Translates to: DTLQGRQKAAGWARPRSSRVGWC*RASPSP
Trigger: TGGAGATGGAGATGCTCTCCAGCACCAGCCCACCCG...GGAACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGACGGCCCTGCAATGTATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GATACATTGCAGGGCCGTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTCCTCCTCTCGGGTGGGCTaGTGCTGGAGAGCATCTCCA +
Preference number: 4 (lower is better)
Translates to: DTLQGRQKAAGWARPRSSSSRVG*CWRASP
Trigger: TGGAGATGCTCTCCAGCACCAGCCCACCCGAGAGGA...GGAACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGACGGCCCTGCAATGTATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GGGATACATTGCAGGGCCGTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTTCCTCTCGGGTGGGCTaGTGCTGGAGAGCATCTCCA +
Preference number: 4 (lower is better)
Translates to: GIHCRAVRRQQGGLGQGVSSRVG*CWRASP
Trigger: TGGAGATGCTCTCCAGCACCAGCCCACCCGAGAGGA...AACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGACGGCCCTGCAATGTATCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp CCAGCAACCCTAGAGCCCCAGAGGAAGGTCAAGGAAGGCGGCTGCATCTTTGGTCTGTGGAGACCATGGTaGGACGGGTCGGGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: PATLEPQRKVKEGGCIFGLWRPW*DGSGRV
Trigger: GACTCTCCCCGACCCGTCCCACCATGGTCTCCACAG...ACCAAAGATGCAGCCGCCTTCCTTGACCTTCCTCTGGGGCTCTAGGGTTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp CCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGTCTTGGGGTGGTCTTTaGCATGCCCATTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: PSEHCRACRGEEEADPPRSWGGL*HAHSSL
Trigger: CAGAGAAGAATGGGCATGCCAAAGACCACCCCAAGA...CCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGCTGGCTCTTGGGGTGGTCTTTaGCATGCCCATTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: GGRSTQAFLLTVRKGEAGSWGGL*HAHSSL
Trigger: CAGAGAAGAATGGGCATGCCAAAGACCACCCCAAGA...GCCAGCCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GGAGCATGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGTTGGCAATCTTGGGGTaGTCTTTGGCATGCCCATTC +
Preference number: 4 (lower is better)
Translates to: GAWSQANTAGPAGVKRRPLAILG*SLACPF
Trigger: GAATGGGCATGCCAAAGACCACCCCAAGATTGCCAA...CGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCATGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp AGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGCCATTGGGCATGGTCTaGATCTCAAAGATCTTGGCA +
Preference number: 4 (lower is better)
Translates to: RACRGEEEADPPRPSCSRPLGMV*ISKILA
Trigger: TGCCAAGATCTTTGAGATCCAGACCATGCCCAATGG...CCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTCCGGGTTTTGCCATTaGGCATGGTCTGGATCTCAA +
Preference number: 4 (lower is better)
Translates to: EHCRACRGEEEADPPRPSSGFCH*AWSGSQ
Trigger: TTGAGATCCAGACCATGCCCAATGGCAAAACCCGGA...GGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp AACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTTTCTTCTCCTTCTGCTaGGAGAGCTTCCTACGGCTC +
Preference number: 4 (lower is better)
Translates to: NTAGPAGVKRRPIHPGLPFFSFC*ESFLRL
Trigger: GAGCCGTAGGAAGCTCTCCCAGCAGAAGGAGAAGAA...AGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp CGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGACACGCCGAGAACAATaGCGAGCATCTGAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: RGEEEADPPRPSCSRFARTRREQ*RASEWL
Trigger: AAGCCACTCAGATGCTCGCCATTGTTCTCGGCGTGT...CCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GGGGTCCAACCTGCAGTCTGGTATTTACATGGGTCTCCCAGGACTGAAGTTGCCGCCTGGGCAGGGAGGTaGGAAGCAGGCTGCTGTGCG +
Preference number: 4 (lower is better)
Translates to: GVQPAVWYLHGSPRTEVAAWAGR*EAGCCA
Trigger: CGCACAGCAGCCTGCTTCCCACCTCCCTGCCCAGGC...GGCAACTTCAGTCCTGGGAGACCCATGTAAATACCAGACTGCAGGTTGGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp ATGAGGGCTCCTCTTCTCAGAGCATGTGGAAACCACTTGGGGAGCTGTAACGGGGCCTGGGCAGGGAGGTaGGAAGCAGGCTGCTGTGCG +
Preference number: 4 (lower is better)
Translates to: MRAPLLRACGNHLGSCNGAWAGR*EAGCCA
Trigger: CGCACAGCAGCCTGCTTCCCACCTCCCTGCCCAGGC...CCCGTTACAGCTCCCCAAGTGGTTTCCACATGCTCTGAGAAGAGGAGCCCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GTGAGGAGCATGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGAGAAAACTCAGCCTCTaGGCCCTGACTCAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: VRSMEPSEHCRACRGEEERKLSL*ALTQAP
Trigger: TGGAGCCTGAGTCAGGGCCCAGAGGCTGAGTTTTCT...CTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCATGCTCCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGAGAAAACTCAGCCTCTaGGCCCTGACTCAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: EEEADPPRPSCSRFARVRRKLSL*ALTQAP
Trigger: TGGAGCCTGAGTCAGGGCCCAGAGGCTGAGTTTTCT...CCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGAGGACTGAAGTTGCCTaGCTCCTCGGCAAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: EEEADPPRPSCSRFARVRRTEVA*LLGKRA
Trigger: AGCTCTCTTGCCGAGGAGCCAGGCAACTTCAGTCCT...CCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp CCTGTGGGCCTTGCAGGGTGTGAACTGTCCATCTCTCCCCACCGCCTGCTCCACTGGCTTGGGAATCTCTaGGGTCCAACCTGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: PVGLAGCELSISPHRLLHWLGNL*GPTCSL
Trigger: CAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCA...GTGGAGCAGGCGGTGGGGAGAGATGGACAGTTCACACCCTGCAAGGCCCACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GTTGCCTGGCTCCTCGGCAAGAGAGCTTGCTTGCCTCCTGTGGGCCTTGCAGGGGGGTCCGGACTAGCCTaGAAAGTAGAGGTCCACATC +
Preference number: 4 (lower is better)
Translates to: VAWLLGKRACLPPVGLAGGSGLA*KVEVHI
Trigger: GATGTGGACCTCTACTTTCCAGGCTAGTCCGGACCC...CCCTGCAAGGCCCACAGGAGGCAAGCAAGCTCTCTTGCCGAGGAGCCAGGCAAC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GATACATTGCAGGGCCGTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTCCCAGAAGGCAGCAGGGTaGGCTAGGCCAAGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: DTLQGRQKAAGWARPRSSQKAAG*ARPRSS
Trigger: GGAACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTG...GGAACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGACGGCCCTGCAATGTATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp GAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGCTGTGTACCTGTCGATGCTaGTGGCACACAAGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: EEADPPRPSCSRFARVRLCTCRC*WHTSSG
Trigger: TCCTGAACTTGTGTGCCATCAGCATCGACAGGTACA...CAGCCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp CAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTCCTCTCCCCATAGACCCTCCTCTGGTCTGCGTTATTaGGTCCGAAGAGGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: QKAAGWARPRSSSPHRPSSGLRY*VRRGVG
Trigger: GCCCACTCCTCTTCGGACTCAATAACGCAGACCAGA...GGAGGGTCTATGGGGAGAGGAACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp TCAGGCTCCAGCAACCCTAGAGCCCCAGAGGAAGGTCAAGGAAGGCGGCTGCATAGGCCGGGTTGGCAATaGTGCACTCGTTCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: SGSSNPRAPEEGQGRRLHRPGWQ*CTRSGL
Trigger: CAGACCAGAACGAGTGCATCATTGCCAACCCGGCCT...ATGCAGCCGCCTTCCTTGACCTTCCTCTGGGGCTCTAGGGTTGCTGGAGCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp GGGATACATTGCAGGGCCGTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTTACGGCTCATGGTCTTaGGGGAGGTCCGGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: GIHCRAVRRQQGGLGQGVYGSWS*GRSGFC
Trigger: GCAAAACCCGGACCTCCCTCAAGACCATGAGCCGTA...AACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGACGGCCCTGCAATGTATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp CCAGCAACCCTAGAGCCCCAGAGGAAGGTCAAGGAAGGCGGCTGCATCTTTGGTCATAGCCCAGCCACGTaGAGGCGCTGTACAGGACAG +
Preference number: 4 (lower is better)
Translates to: PATLEPQRKVKEGGCIFGHSPAT*RRCTGQ
Trigger: CTGTCCTGTACAGCGCCTTCACGTGGCTGGGCTATG...ACCAAAGATGCAGCCGCCTTCCTTGACCTTCCTCTGGGGCTCTAGGGTTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp AGGAAAGTGGTTTTGCGTCAGAGTGTGGCAGAGGCAGTCCCTCAAAGAACCTCTCAGGGCCTGCCGGGGTaGAGAGGAGGCCGATCCACC +
Preference number: 4 (lower is better)
Translates to: RKVVLRQSVAEAVPQRTSQGLPG*RGGRST
Trigger: GGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTG...AGAGGTTCTTTGAGGGACTGCCTCTGCCACACTCTGACGCAAAACCACTTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000544518.5
CDS-3UTR TCA 90 bp GGGAGGGAGCTAAGGTTTTTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGAGCTGTAACGGGGTaGGGTGGGTCCGGACTAGCC +
Preference number: 4 (lower is better)
Translates to: GRELRFLAWESLGSNLQSGAVTG*GGSGLA
Trigger: GGCTAGTCCGGACCCACCTCACCCCGTTACAGCTCC...AGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAGCTCCCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp CCTCTCCCCATAGACCCTCCTGGGCCCTTCAAGATGAGGGCTCCTCTTCTCAGACCCTCAAAGAACCTCTaGTGTCCCCTAGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PLPIDPPGPFKMRAPLLRPSKNL*CPLAQA
Trigger: GGCCTGGGCTAGGGGACATCAGAGGTTCTTTGAGGG...TCTGAGAAGAGGAGCCCTCATCTTGAAGGGCCCAGGAGGGTCTATGGGGAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000544518.5
CDS-3UTR GCA 90 bp GTGAGGTGGGTCCGGACTAGCCTGGAAAGTAGAGGTCCACATCGGGGTGCGGGAGGCCGGCTCCAGTTCTaGCTCTCCAGATCATCATCA +
Preference number: 4 (lower is better)
Translates to: VRWVRTSLESRGPHRGAGGRLQF*LSRSSS
Trigger: TGATGATGATCTGGAGAGGCAGAACTGGAGCCGGCC...TCCCGCACCCCGATGTGGACCTCTACTTTCCAGGCTAGTCCGGACCCACCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp CCTGCAGTCTGGTATTTACATGGGTCTCCCAGGACTGAAGTTGCCTGGCTCCTCCGGGGCTGTCGGGAGTaGTGTGGAGACCATGGTGGG +
Preference number: 4 (lower is better)
Translates to: PAVWYLHGSPRTEVAWLLRGCRE*CGDHGG
Trigger: CCCACCATGGTCTCCACAGCACTCCCGACAGCCCCG...GAGGAGCCAGGCAACTTCAGTCCTGGGAGACCCATGTAAATACCAGACTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp GAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGGCTTTCTTCTCCTTCTaGTGGGAGAGCTTCCTACGG +
Preference number: 4 (lower is better)
Translates to: EEEADPPRPSCSRFARVRAFFSF*WESFLR
Trigger: CCGTAGGAAGCTCTCCCAGCAGAAGGAGAAGAAAGC...CCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp GGGAGGGAGCTAAGGTTTTTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGAACACTGCAGGGCCTaGCGGGGTGAAGAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: GRELRFLAWESLGSNLQSEHCRA*RGEEEA
Trigger: GGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTC...AGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAGCTCCCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp GAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGCTGCTCTGGGGTCCAACCTaGAGTCTGGTATTTACATGG +
Preference number: 4 (lower is better)
Translates to: EEADPPRPSCSRFARVRLLWGPT*SLVFTW
Trigger: CCATGTAAATACCAGACTGCAGGTTGGACCCCAGAG...CAGCCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp AGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAAGGCTGGCCAGCATGTaGTGTGAGAAGGGATACATT +
Preference number: 4 (lower is better)
Translates to: SQANTAGPAGVKRRPIHPRLASM*CEKGYI
Trigger: AATGTATCCCTTCTCACAGCACATGCTGGCCAGCCT...TGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp CAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTCCTCTCCCCATAGACCCTCCGAGTCCGAAGAGGAGTaGGCAGGAGATGGTGAAGGA +
Preference number: 4 (lower is better)
Translates to: QKAAGWARPRSSSPHRPSESEEE*AGDGEG
Trigger: TCCTTCACCATCTCCTGCCCACTCCTCTTCGGACTC...GGAGGGTCTATGGGGAGAGGAACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp CGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGTCTTGGGGTGGTCTTTaGCATGCCCATTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: RGEEEADPPRPSCSRFARSWGGL*HAHSSL
Trigger: CAGAGAAGAATGGGCATGCCAAAGACCACCCCAAGA...CCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp AACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTAGATCTTGGCAATCTTaGGGTGGTCTTTGGCATGCC +
Preference number: 4 (lower is better)
Translates to: NTAGPAGVKRRPIHPGLPRSWQS*GGLWHA
Trigger: GGCATGCCAAAGACCACCCCAAGATTGCCAAGATCT...AGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GGAGCATGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGCCATTGGGCATGGTCTaGATCTCAAAGATCTTGGCA +
Preference number: 4 (lower is better)
Translates to: GAWSQANTAGPAGVKRRPPLGMV*ISKILA
Trigger: TGCCAAGATCTTTGAGATCCAGACCATGCCCAATGG...CGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCATGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp CGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGTGGCGAGCATCTGAGTaGCTTTCTTCTCCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: RGEEEADPPRPSCSRFARWRASE*LSSPSA
Trigger: AGCAGAAGGAGAAGAAAGCCACTCAGATGCTCGCCA...CCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp TGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACTGGCGAGCATCTGAGTaGCTTTCTTCTCCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: WSQANTAGPAGVKRRPIHWRASE*LSSPSA
Trigger: AGCAGAAGGAGAAGAAAGCCACTCAGATGCTCGCCA...GTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp CCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCTAAGGTTTTTGGCTTaGGAATCTCTGGGGTCCAAC +
Preference number: 4 (lower is better)
Translates to: PSEHCRACRGEEEADPPRLRFLA*ESLGSN
Trigger: GTTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAG...CCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp CAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTCCTCTCCCCATAGACCCTCCGGGTCCGGACTAGCCTaGAAAGTAGAGGTCCACATC +
Preference number: 4 (lower is better)
Translates to: QKAAGWARPRSSSPHRPSGSGLA*KVEVHI
Trigger: GATGTGGACCTCTACTTTCCAGGCTAGTCCGGACCC...GGAGGGTCTATGGGGAGAGGAACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp AGGGATACATTGCAGGGCCGTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTGTAACGGGGTGAGGTaGGTCCGGACTAGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: RDTLQGRQKAAGWARPRSCNGVR*VRTSLE
Trigger: TTCCAGGCTAGTCCGGACCCACCTCACCCCGTTACA...ACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGACGGCCCTGCAATGTATCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp AACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTCACAGTGAATCCTGCTaGATTTCCACTCACCTACCA +
Preference number: 4 (lower is better)
Translates to: NTAGPAGVKRRPIHPGLPHSESC*ISTHLP
Trigger: TGGTAGGTGAGTGGAAATTCAGCAGGATTCACTGTG...AGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
CDS-3UTR TCA 90 bp GGAGCATGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGACGAAGATGTCACAGTaGATCCTGCTGAATTTCCAC +
Preference number: 4 (lower is better)
Translates to: GAWSQANTAGPAGVKRRPTKMSQ*ILLNFH
Trigger: GTGGAAATTCAGCAGGATTCACTGTGACATCTTCGT...CGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCATGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp GTGAGGAGCATGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGTGTACCTGTCGATGCTaGTGGCACACAAGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: VRSMEPSEHCRACRGEEECTCRC*WHTSSG
Trigger: TCCTGAACTTGTGTGCCATCAGCATCGACAGGTACA...CTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCATGCTCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp TCAGGCTCCAGCAACCCTAGAGCCCCAGAGGAAGGTCAAGGAAGGCGGCTGCATTCTGGTCTGCGTTATTaGGTCCGAAGAGGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: SGSSNPRAPEEGQGRRLHSGLRY*VRRGVG
Trigger: GCCCACTCCTCTTCGGACTCAATAACGCAGACCAGA...ATGCAGCCGCCTTCCTTGACCTTCCTCTGGGGCTCTAGGGTTGCTGGAGCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp TCTGGTATTTACATGGGTCTCCCAGGACTGAAGTTGCCTGGCTCCTCGGCAAGAGGAGCTGTAACGGGGTaGGGTGGGTCCGGACTAGCC +
Preference number: 4 (lower is better)
Translates to: SGIYMGLPGLKLPGSSARGAVTG*GGSGLA
Trigger: GGCTAGTCCGGACCCACCTCACCCCGTTACAGCTCC...TCTTGCCGAGGAGCCAGGCAACTTCAGTCCTGGGAGACCCATGTAAATACCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp GAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGTTCATGTCCTCGGGGTaGGTACAGTTGCCCTTTAGT +
Preference number: 4 (lower is better)
Translates to: EEEADPPRPSCSRFARVRFMSSG*VQLPFS
Trigger: ACTAAAGGGCAACTGTACTCACCCCGAGGACATGAA...CCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp GCAGTGAGGAGCATGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGTTCATGTCCTCGGGGTaGGTACAGTTGCCCTTTAGT +
Preference number: 4 (lower is better)
Translates to: AVRSMEPSEHCRACRGEEFMSSG*VQLPFS
Trigger: ACTAAAGGGCAACTGTACTCACCCCGAGGACATGAA...CTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCATGCTCCTCACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp GGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTTACATGGGTCTCCCAGGACTGAACACTGCAGGGCCTaGCGGGGTGAAGAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: GISGVQPAVWYLHGSPRTEHCRA*RGEEEA
Trigger: GGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTC...AGTCCTGGGAGACCCATGTAAATACCAGACTGCAGGTTGGACCCCAGAGATTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp CAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTCCTCTCCCCATAGACCCTCCGTCAAGGAAGGCGGCTaGATCTTTGGTGCCAAGGAT +
Preference number: 4 (lower is better)
Translates to: QKAAGWARPRSSSPHRPSVKEGG*IFGAKD
Trigger: ATCCTTGGCACCAAAGATGCAGCCGCCTTCCTTGAC...GGAGGGTCTATGGGGAGAGGAACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp CCTCTCCCCATAGACCCTCCTGGGCCCTTCAAGATGAGGGCTCCTCTTCTCAGAAGGTCCACATCGGGGTaGGGGAGGGAGCTAAGGTTT +
Preference number: 4 (lower is better)
Translates to: PLPIDPPGPFKMRAPLLRRSTSG*GRELRF
Trigger: AAACCTTAGCTCCCTCCCGCACCCCGATGTGGACCT...TCTGAGAAGAGGAGCCCTCATCTTGAAGGGCCCAGGAGGGTCTATGGGGAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp GAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGAGGCTGGCCAGCATGTaGTGTGAGAAGGGATACATT +
Preference number: 4 (lower is better)
Translates to: EEEADPPRPSCSRFARVRRLASM*CEKGYI
Trigger: AATGTATCCCTTCTCACAGCACATGCTGGCCAGCCT...CCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp CCTCTCCCCATAGACCCTCCTGGGCCCTTCAAGATGAGGGCTCCTCTTCTCAGATCAGGTAGTTGGTGGTaGTCTGCAGCGCCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: PLPIDPPGPFKMRAPLLRSGSWW*SAAPSR
Trigger: GCGAGAAGGCGCTGCAGACCACCACCAACTACCTGA...TCTGAGAAGAGGAGCCCTCATCTTGAAGGGCCCAGGAGGGTCTATGGGGAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GGGATACATTGCAGGGCCGTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTCGATCAGGTAGTTGGTaGTGGTCTGCAGCGCCTTCT +
Preference number: 4 (lower is better)
Translates to: GIHCRAVRRQQGGLGQGVRSGSW*WSAAPS
Trigger: AGAAGGCGCTGCAGACCACCACCAACTACCTGATCG...AACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGACGGCCCTGCAATGTATCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GCCGTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTCCTCTCCCCATAGACCGTAGAAGGAGACGATaGAGGAGTAGACCACGAAGG +
Preference number: 4 (lower is better)
Translates to: AVRRQQGGLGQGVPLPIDRRRRR*RSRPRR
Trigger: CCTTCGTGGTCTACTCCTCCATCGTCTCCTTCTACG...GTCTATGGGGAGAGGAACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGACGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp CCTCTCCCCATAGACCCTCCTGGGCCCTTCAAGATGAGGGCTCCTCTTCTCAGACATTCTTCTCTGGTTTaGCGGGGCTGTCGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: PLPIDPPGPFKMRAPLLRHSSLV*RGCREC
Trigger: GCACTCCCGACAGCCCCGCCAAACCAGAGAAGAATG...TCTGAGAAGAGGAGCCCTCATCTTGAAGGGCCCAGGAGGGTCTATGGGGAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp CCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGGGATCTCAAAGATCTTaGCAATCTTGGGGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: PSEHCRACRGEEEADPPRGSQRS*QSWGGL
Trigger: AAGACCACCCCAAGATTGCCAAGATCTTTGAGATCC...CCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp AACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTCCATTGGGCATGGTCTaGATCTCAAAGATCTTGGCA +
Preference number: 4 (lower is better)
Translates to: NTAGPAGVKRRPIHPGLPPLGMV*ISKILA
Trigger: TGCCAAGATCTTTGAGATCCAGACCATGCCCAATGG...AGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GTTGCCTGGCTCCTCGGCAAGAGAGCTTGCTTGCCTCCTGTGGGCCTTGCAGGGTCCGGGTTTTGCCATTaGGCATGGTCTGGATCTCAA +
Preference number: 4 (lower is better)
Translates to: VAWLLGKRACLPPVGLAGSGFCH*AWSGSQ
Trigger: TTGAGATCCAGACCATGCCCAATGGCAAAACCCGGA...CCCTGCAAGGCCCACAGGAGGCAAGCAAGCTCTCTTGCCGAGGAGCCAGGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp CCTGTGGGCCTTGCAGGGTGTGAACTGTCCATCTCTCCCCACCGCCTGCTCCACTCCGGGTTTTGCCATTaGGCATGGTCTGGATCTCAA +
Preference number: 4 (lower is better)
Translates to: PVGLAGCELSISPHRLLHSGFCH*AWSGSQ
Trigger: TTGAGATCCAGACCATGCCCAATGGCAAAACCCGGA...GTGGAGCAGGCGGTGGGGAGAGATGGACAGTTCACACCCTGCAAGGCCCACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GGGATACATTGCAGGGCCGTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTGGGTCCGGACTAGCCTaGAAAGTAGAGGTCCACATC +
Preference number: 4 (lower is better)
Translates to: GIHCRAVRRQQGGLGQGVGSGLA*KVEVHI
Trigger: GATGTGGACCTCTACTTTCCAGGCTAGTCCGGACCC...AACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGACGGCCCTGCAATGTATCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp CCTCTCCCCATAGACCCTCCTGGGCCCTTCAAGATGAGGGCTCCTCTTCTCAGATGTAACGGGGTGAGGTaGGTCCGGACTAGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: PLPIDPPGPFKMRAPLLRCNGVR*VRTSLE
Trigger: TTCCAGGCTAGTCCGGACCCACCTCACCCCGTTACA...TCTGAGAAGAGGAGCCCTCATCTTGAAGGGCCCAGGAGGGTCTATGGGGAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp CCTGTGGGCCTTGCAGGGTGTGAACTGTCCATCTCTCCCCACCGCCTGCTCCACTTTTGCGTCAGAGTGTaGCAGAGGCAGTCCCTCAAA +
Preference number: 4 (lower is better)
Translates to: PVGLAGCELSISPHRLLHFCVRV*QRQSLK
Trigger: TTTGAGGGACTGCCTCTGCCACACTCTGACGCAAAA...GTGGAGCAGGCGGTGGGGAGAGATGGACAGTTCACACCCTGCAAGGCCCACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000544518.5
CDS-3UTR CCA 90 bp AACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTTCTCCGCCTGTTCACTaGGAAACTCCCATTAGACTT +
Preference number: 4 (lower is better)
Translates to: NTAGPAGVKRRPIHPGLPSPPVH*ETPIRL
Trigger: AAGTCTAATGGGAGTTTCCCAGTGAACAGGCGGAGA...AGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp TGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACTCTCCGCCTGTTCACTaGGAAACTCCCATTAGACTT +
Preference number: 4 (lower is better)
Translates to: WSQANTAGPAGVKRRPIHSPPVH*ETPIRL
Trigger: AAGTCTAATGGGAGTTTCCCAGTGAACAGGCGGAGA...GTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp GGGTCCAACCTGCAGTCTGGTATTTACATGGGTCTCCCAGGACTGAAGTTGCCTTCCCGTCTGACCCGTTaGAGGGCCGGCTCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: GSNLQSGIYMGLPGLKLPSRLTR*RAGSSS
Trigger: AGAACTGGAGCCGGCCCTTCAACGGGTCAGACGGGA...AGGCAACTTCAGTCCTGGGAGACCCATGTAAATACCAGACTGCAGGTTGGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp CGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGACGAAGATGTCACAGTaGATCCTGCTGAATTTCCAC +
Preference number: 4 (lower is better)
Translates to: RGEEEADPPRPSCSRFARTKMSQ*ILLNFH
Trigger: GTGGAAATTCAGCAGGATTCACTGTGACATCTTCGT...CCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp AGGAAAGTGGTTTTGCGTCAGAGTGTGGCAGAGGCAGTCCCTCAAAGAACCTCTAGGGTGTGCGGGCAGTaGGGAGCATGGAGCCAAGCG +
Preference number: 4 (lower is better)
Translates to: RKVVLRQSVAEAVPQRTSRVCGQ*GAWSQA
Trigger: CGCTTGGCTCCATGCTCCTCACTGCCCGCACACCCT...AGAGGTTCTTTGAGGGACTGCCTCTGCCACACTCTGACGCAAAACCACTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000544518.5
CDS-3UTR TCA 90 bp GCCGTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTCCTCTCCCCATAGACTTCATGTCCTCGGGGTaGGTACAGTTGCCCTTTAGT +
Preference number: 4 (lower is better)
Translates to: AVRRQQGGLGQGVPLPIDFMSSG*VQLPFS
Trigger: ACTAAAGGGCAACTGTACTCACCCCGAGGACATGAA...GTCTATGGGGAGAGGAACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGACGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp GGGTCCAACCTGCAGTCTGGTATTTACATGGGTCTCCCAGGACTGAAGTTGCCTCGCGGGACACAGCCATaGACACCAGCACGTTGCCGA +
Preference number: 4 (lower is better)
Translates to: GSNLQSGIYMGLPGLKLPRGTQP*TPARCR
Trigger: TCGGCAACGTGCTGGTGTGCATGGCTGTGTCCCGCG...AGGCAACTTCAGTCCTGGGAGACCCATGTAAATACCAGACTGCAGGTTGGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp ATGAGGGCTCCTCTTCTCAGAGCATGTGGAAACCACTTGGGGAGCTGTAACGGGGAGGAGGTCGGCCACTaGGAGGCTGACGATCAGGTA +
Preference number: 4 (lower is better)
Translates to: MRAPLLRACGNHLGSCNGEEVGH*EADDQV
Trigger: TACCTGATCGTCAGCCTCGCAGTGGCCGACCTCCTC...CCCGTTACAGCTCCCCAAGTGGTTTCCACATGCTCTGAGAAGAGGAGCCCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp CCAGCAACCCTAGAGCCCCAGAGGAAGGTCAAGGAAGGCGGCTGCATCTTTGGTCTCGCTTGCGGCGTCTaGGGAGGACAATGTAGATCT +
Preference number: 4 (lower is better)
Translates to: PATLEPQRKVKEGGCIFGLACGV*GGQCRS
Trigger: AGATCTACATTGTCCTCCGCAGACGCCGCAAGCGAG...ACCAAAGATGCAGCCGCCTTCCTTGACCTTCCTCTGGGGCTCTAGGGTTGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp AGGGATACATTGCAGGGCCGTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTGCTTTCTTCTCCTTCTaGTGGGAGAGCTTCCTACGG +
Preference number: 4 (lower is better)
Translates to: RDTLQGRQKAAGWARPRSAFFSF*WESFLR
Trigger: CCGTAGGAAGCTCTCCCAGCAGAAGGAGAAGAAAGC...ACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGACGGCCCTGCAATGTATCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp GGACTGAAGTTGCCTGGCTCCTCGGCAAGAGAGCTTGCTTGCCTCCTGTGGGCCGGACAGGCGGGATGTTaGAGTCACAGTGTATGTTCA +
Preference number: 4 (lower is better)
Translates to: GLKLPGSSARELACLLWAGQAGC*SHSVCS
Trigger: TGAACATACACTGTGACTGCAACATCCCGCCTGTCC...GGCCCACAGGAGGCAAGCAAGCTCTCTTGCCGAGGAGCCAGGCAACTTCAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GTGAGGAGCATGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGATGATGCACTCGTTCTaGTCTGCGTTATTGAGTCCG +
Preference number: 4 (lower is better)
Translates to: VRSMEPSEHCRACRGEEEMMHSF*SALLSP
Trigger: CGGACTCAATAACGCAGACCAGAACGAGTGCATCAT...CTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCATGCTCCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGATGATGCACTCGTTCTaGTCTGCGTTATTGAGTCCG +
Preference number: 4 (lower is better)
Translates to: EEEADPPRPSCSRFARVRMMHSF*SALLSP
Trigger: CGGACTCAATAACGCAGACCAGAACGAGTGCATCAT...CCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp TCTGGTATTTACATGGGTCTCCCAGGACTGAAGTTGCCTGGCTCCTCGGCAAGAAGTGGAGCCCTCAGGTaGGCCCTGAAAGCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: SGIYMGLPGLKLPGSSARSGALR*ALKARL
Trigger: CAGCCGAGCTTTCAGGGCCCACCTGAGGGCTCCACT...TCTTGCCGAGGAGCCAGGCAACTTCAGTCCTGGGAGACCCATGTAAATACCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp TATTTACATGGGTCTCCCAGGACTGAAGTTGCCTGGCTCCTCGGCAAGAGAGCTGTGCTGTGGAGACCATaGTGGGACGGGTCGGGGAGA +
Preference number: 4 (lower is better)
Translates to: YLHGSPRTEVAWLLGKRAVLWRP*WDGSGR
Trigger: TCTCCCCGACCCGTCCCACCATGGTCTCCACAGCAC...AGCTCTCTTGCCGAGGAGCCAGGCAACTTCAGTCCTGGGAGACCCATGTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp TCTGGTATTTACATGGGTCTCCCAGGACTGAAGTTGCCTGGCTCCTCGGCAAGACTGTCGGGAGTGCTGTaGAGACCATGGTGGGACGGG +
Preference number: 4 (lower is better)
Translates to: SGIYMGLPGLKLPGSSARLSGVL*RPWWDG
Trigger: CCCGTCCCACCATGGTCTCCACAGCACTCCCGACAG...TCTTGCCGAGGAGCCAGGCAACTTCAGTCCTGGGAGACCCATGTAAATACCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp AACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGGATCTCAAAGATCTTaGCAATCTTGGGGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: NTAGPAGVKRRPIHPGLPGSQRS*QSWGGL
Trigger: AAGACCACCCCAAGATTGCCAAGATCTTTGAGATCC...AGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp CCTGTGGGCCTTGCAGGGTGTGAACTGTCCATCTCTCCCCACCGCCTGCTCCACCCATTGGGCATGGTCTaGATCTCAAAGATCTTGGCA +
Preference number: 4 (lower is better)
Translates to: PVGLAGCELSISPHRLLHPLGMV*ISKILA
Trigger: TGCCAAGATCTTTGAGATCCAGACCATGCCCAATGG...GTGGAGCAGGCGGTGGGGAGAGATGGACAGTTCACACCCTGCAAGGCCCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GGGATACATTGCAGGGCCGTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTACACGCCGAGAACAATaGCGAGCATCTGAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: GIHCRAVRRQQGGLGQGVTRREQ*RASEWL
Trigger: AAGCCACTCAGATGCTCGCCATTGTTCTCGGCGTGT...AACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGACGGCCCTGCAATGTATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp CCTGCAGTCTGGTATTTACATGGGTCTCCCAGGACTGAAGTTGCCTGGCTCCTCTCACTAGCACTGCCCTaGCAGAGTGAGGGTGTGCGG +
Preference number: 4 (lower is better)
Translates to: PAVWYLHGSPRTEVAWLLSLALP*QSEGVR
Trigger: CCGCACACCCTCACTCTGCCAGGGCAGTGCTAGTGA...GAGGAGCCAGGCAACTTCAGTCCTGGGAGACCCATGTAAATACCAGACTGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp CAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTCCTCTCCCCATAGACCCTCCTTTTGCGTCAGAGTGTaGCAGAGGCAGTCCCTCAAA +
Preference number: 4 (lower is better)
Translates to: QKAAGWARPRSSSPHRPSFCVRV*QRQSLK
Trigger: TTTGAGGGACTGCCTCTGCCACACTCTGACGCAAAA...GGAGGGTCTATGGGGAGAGGAACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000544518.5
CDS-3UTR TCA 90 bp TTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTTACATGGGTCTCTCCCGTCTGACCCGTTaGAGGGCCGGCTCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: LAWESLGSNLQSGIYMGLSRLTR*RAGSSS
Trigger: AGAACTGGAGCCGGCCCTTCAACGGGTCAGACGGGA...GAGACCCATGTAAATACCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp TATTTACATGGGTCTCCCAGGACTGAAGTTGCCTGGCTCCTCGGCAAGAGAGCTAGACAACCCAGGGCATaGCCAGTGTGGCGACGAGGA +
Preference number: 4 (lower is better)
Translates to: YLHGSPRTEVAWLLGKRARQPRA*PVWRRG
Trigger: TCCTCGTCGCCACACTGGTCATGCCCTGGGTTGTCT...AGCTCTCTTGCCGAGGAGCCAGGCAACTTCAGTCCTGGGAGACCCATGTAAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp TGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTTACATGGGTCTCCAGACAACCCAGGGCATaGCCAGTGTGGCGACGAGGA +
Preference number: 4 (lower is better)
Translates to: WLGNLWGPTCSLVFTWVSRQPRA*PVWRRG
Trigger: TCCTCGTCGCCACACTGGTCATGCCCTGGGTTGTCT...GGAGACCCATGTAAATACCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp CAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTCCTCTCCCCATAGACCCTCCCACAGTGAATCCTGCTaGATTTCCACTCACCTACCA +
Preference number: 4 (lower is better)
Translates to: QKAAGWARPRSSSPHRPSHSESC*ISTHLP
Trigger: TGGTAGGTGAGTGGAAATTCAGCAGGATTCACTGTG...GGAGGGTCTATGGGGAGAGGAACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
CDS-3UTR TCA 90 bp GTTGCCTGGCTCCTCGGCAAGAGAGCTTGCTTGCCTCCTGTGGGCCTTGCAGGGACGAAGATGTCACAGTaGATCCTGCTGAATTTCCAC +
Preference number: 4 (lower is better)
Translates to: VAWLLGKRACLPPVGLAGTKMSQ*ILLNFH
Trigger: GTGGAAATTCAGCAGGATTCACTGTGACATCTTCGT...CCCTGCAAGGCCCACAGGAGGCAAGCAAGCTCTCTTGCCGAGGAGCCAGGCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp TGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTTACATGGGTCTCCTGCTGCGTTTGGTGTTaGCTCGCTTGCGGCGTCTGC +
Preference number: 4 (lower is better)
Translates to: WLGNLWGPTCSLVFTWVSCCVWC*LACGVC
Trigger: GCAGACGCCGCAAGCGAGTCAACACCAAACGCAGCA...GGAGACCCATGTAAATACCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp GGGAGGGAGCTAAGGTTTTTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTTACGGCTCATGGTCTTaGGGGAGGTCCGGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: GRELRFLAWESLGSNLQSYGSWS*GRSGFC
Trigger: GCAAAACCCGGACCTCCCTCAAGACCATGAGCCGTA...AGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAGCTCCCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp GTTTTGCGTCAGAGTGTGGCAGAGGCAGTCCCTCAAAGAACCTCTGATGTCCCCTACGGCTCATGGTCTTaGGGGAGGTCCGGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: VLRQSVAEAVPQRTSDVPYGSWS*GRSGFC
Trigger: GCAAAACCCGGACCTCCCTCAAGACCATGAGCCGTA...GGGGACATCAGAGGTTCTTTGAGGGACTGCCTCTGCCACACTCTGACGCAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000544518.5
CDS-3UTR TCA 90 bp GATACATTGCAGGGCCGTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTCCACAATGGCGAGCATCTaGGTGGCTTTCTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: DTLQGRQKAAGWARPRSSTMASI*VAFFSF
Trigger: GAAGGAGAAGAAAGCCACTCAGATGCTCGCCATTGT...GGAACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGACGGCCCTGCAATGTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp TGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTTACATGGGTCTCCGAGGAGGTCGGCCACTaGGAGGCTGACGATCAGGTA +
Preference number: 4 (lower is better)
Translates to: WLGNLWGPTCSLVFTWVSEEVGH*EADDQV
Trigger: TACCTGATCGTCAGCCTCGCAGTGGCCGACCTCCTC...GGAGACCCATGTAAATACCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp CAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTCCTCTCCCCATAGACCCTCCATGATGCACTCGTTCTaGTCTGCGTTATTGAGTCCG +
Preference number: 4 (lower is better)
Translates to: QKAAGWARPRSSSPHRPSMMHSF*SALLSP
Trigger: CGGACTCAATAACGCAGACCAGAACGAGTGCATCAT...GGAGGGTCTATGGGGAGAGGAACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp CCAGCAACCCTAGAGCCCCAGAGGAAGGTCAAGGAAGGCGGCTGCATCTTTGGTCGTAGAAGGAGACGATaGAGGAGTAGACCACGAAGG +
Preference number: 4 (lower is better)
Translates to: PATLEPQRKVKEGGCIFGRRRRR*RSRPRR
Trigger: CCTTCGTGGTCTACTCCTCCATCGTCTCCTTCTACG...ACCAAAGATGCAGCCGCCTTCCTTGACCTTCCTCTGGGGCTCTAGGGTTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp TGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTTACATGGGTCTCCTCCTCTCGGGTGGGCTaGTGCTGGAGAGCATCTCCA +
Preference number: 4 (lower is better)
Translates to: WLGNLWGPTCSLVFTWVSSSRVG*CWRASP
Trigger: TGGAGATGCTCTCCAGCACCAGCCCACCCGAGAGGA...GGAGACCCATGTAAATACCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp TTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTTACATGGGTCTCTCGGGGAGAGTCAGCTaGTGGTGGCTGGGTGGGATG +
Preference number: 4 (lower is better)
Translates to: LAWESLGSNLQSGIYMGLSGRVS*WWLGGM
Trigger: CATCCCACCCAGCCACCACCAGCTGACTCTCCCCGA...GAGACCCATGTAAATACCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp TTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTTACATGGGTCTCGTGCTGTGGAGACCATaGTGGGACGGGTCGGGGAGA +
Preference number: 4 (lower is better)
Translates to: LAWESLGSNLQSGIYMGLVLWRP*WDGSGR
Trigger: TCTCCCCGACCCGTCCCACCATGGTCTCCACAGCAC...GAGACCCATGTAAATACCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTCCTCTCCCCATAGACCCTTCTTGGGGTGGTCTTTaGCATGCCCATTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: VRRQQGGLGQGVPLPIDPSWGGL*HAHSSL
Trigger: CAGAGAAGAATGGGCATGCCAAAGACCACCCCAAGA...AGGGTCTATGGGGAGAGGAACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp AGGGATACATTGCAGGGCCGTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTTGGCAATCTTGGGGTaGTCTTTGGCATGCCCATTC +
Preference number: 4 (lower is better)
Translates to: RDTLQGRQKAAGWARPRSLAILG*SLACPF
Trigger: GAATGGGCATGCCAAAGACCACCCCAAGATTGCCAA...ACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGACGGCCCTGCAATGTATCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GTGAGGAGCATGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGGATCTCAAAGATCTTaGCAATCTTGGGGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: VRSMEPSEHCRACRGEEEGSQRS*QSWGGL
Trigger: AAGACCACCCCAAGATTGCCAAGATCTTTGAGATCC...CTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCATGCTCCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGTTTTGCCATTGGGCATaGTCTGGATCTCAAAGATCT +
Preference number: 4 (lower is better)
Translates to: GVKRRPIHPGLPAHGSQGFCHWA*SGSQRS
Trigger: AGATCTTTGAGATCCAGACCATGCCCAATGGCAAAA...CCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GGGATACATTGCAGGGCCGTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTTCCGGGTTTTGCCATTaGGCATGGTCTGGATCTCAA +
Preference number: 4 (lower is better)
Translates to: GIHCRAVRRQQGGLGQGVSGFCH*AWSGSQ
Trigger: TTGAGATCCAGACCATGCCCAATGGCAAAACCCGGA...AACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGACGGCCCTGCAATGTATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp TCAGGCTCCAGCAACCCTAGAGCCCCAGAGGAAGGTCAAGGAAGGCGGCTGCATTGGCGAGCATCTGAGTaGCTTTCTTCTCCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: SGSSNPRAPEEGQGRRLHWRASE*LSSPSA
Trigger: AGCAGAAGGAGAAGAAAGCCACTCAGATGCTCGCCA...ATGCAGCCGCCTTCCTTGACCTTCCTCTGGGGCTCTAGGGTTGCTGGAGCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp TCTGGTATTTACATGGGTCTCCCAGGACTGAAGTTGCCTGGCTCCTCGGCAAGATCACTAGCACTGCCCTaGCAGAGTGAGGGTGTGCGG +
Preference number: 4 (lower is better)
Translates to: SGIYMGLPGLKLPGSSARSLALP*QSEGVR
Trigger: CCGCACACCCTCACTCTGCCAGGGCAGTGCTAGTGA...TCTTGCCGAGGAGCCAGGCAACTTCAGTCCTGGGAGACCCATGTAAATACCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp AGGGCCAGGCCAGGCCAGATGGTTTTCAGCAGCCTCTTAGCCGTGGGCTCCTCTCTAAGGTTTTTGGCTTaGGAATCTCTGGGGTCCAAC +
Preference number: 4 (lower is better)
Translates to: RARPGQMVFSSLLAVGSSLRFLA*ESLGSN
Trigger: GTTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAG...AGAGGAGCCCACGGCTAAGAGGCTGCTGAAAACCATCTGGCCTGGCCTGGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000544518.5
CDS-3UTR CCA 90 bp GTGAGGTGGGTCCGGACTAGCCTGGAAAGTAGAGGTCCACATCGGGGTGCGGGACTAAGGTTTTTGGCTTaGGAATCTCTGGGGTCCAAC +
Preference number: 4 (lower is better)
Translates to: VRWVRTSLESRGPHRGAGLRFLA*ESLGSN
Trigger: GTTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAG...TCCCGCACCCCGATGTGGACCTCTACTTTCCAGGCTAGTCCGGACCCACCTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp TCTGGTATTTACATGGGTCTCCCAGGACTGAAGTTGCCTGGCTCCTCGGCAAGACAGAAGGCAGCAGGGTaGGCTAGGCCAAGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: SGIYMGLPGLKLPGSSARQKAAG*ARPRSS
Trigger: GGAACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTG...TCTTGCCGAGGAGCCAGGCAACTTCAGTCCTGGGAGACCCATGTAAATACCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCAATAGAAAAGGAAAGTaGTTTTGCGTCAGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: EHCRACRGEEEADPPRPSNRKGK*FCVRVW
Trigger: CCACACTCTGACGCAAAACCACTTTCCTTTTCTATT...GGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000544518.5
CDS-3UTR TCA 90 bp CCAGCAACCCTAGAGCCCCAGAGGAAGGTCAAGGAAGGCGGCTGCATCTTTGGTACAATGGCGAGCATCTaGGTGGCTTTCTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PATLEPQRKVKEGGCIFGTMASI*VAFFSF
Trigger: GAAGGAGAAGAAAGCCACTCAGATGCTCGCCATTGT...ACCAAAGATGCAGCCGCCTTCCTTGACCTTCCTCTGGGGCTCTAGGGTTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp ATGAGGGCTCCTCTTCTCAGAGCATGTGGAAACCACTTGGGGAGCTGTAACGGGGGCCGGCTCCAGTTCTaGCTCTCCAGATCATCATCA +
Preference number: 4 (lower is better)
Translates to: MRAPLLRACGNHLGSCNGGRLQF*LSRSSS
Trigger: TGATGATGATCTGGAGAGGCAGAACTGGAGCCGGCC...CCCGTTACAGCTCCCCAAGTGGTTTCCACATGCTCTGAGAAGAGGAGCCCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp TTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTTACATGGGTCTCGAGGAGGTCGGCCACTaGGAGGCTGACGATCAGGTA +
Preference number: 4 (lower is better)
Translates to: LAWESLGSNLQSGIYMGLEEVGH*EADDQV
Trigger: TACCTGATCGTCAGCCTCGCAGTGGCCGACCTCCTC...GAGACCCATGTAAATACCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp CCAGCAACCCTAGAGCCCCAGAGGAAGGTCAAGGAAGGCGGCTGCATCTTTGGTGGACAGGCGGGATGTTaGAGTCACAGTGTATGTTCA +
Preference number: 4 (lower is better)
Translates to: PATLEPQRKVKEGGCIFGGQAGC*SHSVCS
Trigger: TGAACATACACTGTGACTGCAACATCCCGCCTGTCC...ACCAAAGATGCAGCCGCCTTCCTTGACCTTCCTCTGGGGCTCTAGGGTTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp CCTCTCCCCATAGACCCTCCTGGGCCCTTCAAGATGAGGGCTCCTCTTCTCAGAGGACAGGCGGGATGTTaGAGTCACAGTGTATGTTCA +
Preference number: 4 (lower is better)
Translates to: PLPIDPPGPFKMRAPLLRGQAGC*SHSVCS
Trigger: TGAACATACACTGTGACTGCAACATCCCGCCTGTCC...TCTGAGAAGAGGAGCCCTCATCTTGAAGGGCCCAGGAGGGTCTATGGGGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp GAGCTAAGGTTTTTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTGAGCCAAGCGAACACTaGAGGGCCTGCCGGGGTGAA +
Preference number: 4 (lower is better)
Translates to: ELRFLAWESLGSNLQSGIEPSEH*RACRGE
Trigger: TTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTC...AATACCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp TGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTTACATGGGTCTCCCTCGGCAAGAGAGCTTaGTTGCCTCCTGTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: WLGNLWGPTCSLVFTWVSLGKRA*LPPVGL
Trigger: AAGGCCCACAGGAGGCAAGCAAGCTCTCTTGCCGAG...GGAGACCCATGTAAATACCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTTACATGGGTCTCCCAGGACTTCAGGTAGTTGGTGGTaGTCTGCAGCGCCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: GISGVQPAVWYLHGSPRTSGSWW*SAAPSR
Trigger: GCGAGAAGGCGCTGCAGACCACCACCAACTACCTGA...AGTCCTGGGAGACCCATGTAAATACCAGACTGCAGGTTGGACCCCAGAGATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GCTAAGGTTTTTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTTACCGGGTCCTCTCGGGTaGGCTGGTGCTGGAGAGCAT +
Preference number: 4 (lower is better)
Translates to: AKVFGLGISGVQPAVWYLPGPLG*AGAGEH
Trigger: ATGCTCTCCAGCACCAGCCCACCCGAGAGGACCCGG...TAAATACCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp TGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTTACATGGGTCTCCCATTCTTCTCTGGTTTaGCGGGGCTGTCGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: WLGNLWGPTCSLVFTWVSHSSLV*RGCREC
Trigger: GCACTCCCGACAGCCCCGCCAAACCAGAGAAGAATG...GGAGACCCATGTAAATACCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp TCTGGTATTTACATGGGTCTCCCAGGACTGAAGTTGCCTGGCTCCTCGGCAAGACATTCTTCTCTGGTTTaGCGGGGCTGTCGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: SGIYMGLPGLKLPGSSARHSSLV*RGCREC
Trigger: GCACTCCCGACAGCCCCGCCAAACCAGAGAAGAATG...TCTTGCCGAGGAGCCAGGCAACTTCAGTCCTGGGAGACCCATGTAAATACCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp TCTGGTATTTACATGGGTCTCCCAGGACTGAAGTTGCCTGGCTCCTCGGCAAGAATGCCCATTCTTCTCTaGTTTGGCGGGGCTGTCGGG +
Preference number: 4 (lower is better)
Translates to: SGIYMGLPGLKLPGSSARMPILL*FGGAVG
Trigger: CCCGACAGCCCCGCCAAACCAGAGAAGAATGGGCAT...TCTTGCCGAGGAGCCAGGCAACTTCAGTCCTGGGAGACCCATGTAAATACCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GCTAGGCCAAGGAGTTCCTCTCCCCATAGACCCTCCTGGGCCCTTCAAGATGAGAGATCTTGGCAATCTTaGGGTGGTCTTTGGCATGCC +
Preference number: 4 (lower is better)
Translates to: ARPRSSSPHRPSWALQDERSWQS*GGLWHA
Trigger: GGCATGCCAAAGACCACCCCAAGATTGCCAAGATCT...CTCATCTTGAAGGGCCCAGGAGGGTCTATGGGGAGAGGAACTCCTTGGCCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTCCTCTCCCCATAGACCCTCCATTGGGCATGGTCTaGATCTCAAAGATCTTGGCA +
Preference number: 4 (lower is better)
Translates to: VRRQQGGLGQGVPLPIDPPLGMV*ISKILA
Trigger: TGCCAAGATCTTTGAGATCCAGACCATGCCCAATGG...AGGGTCTATGGGGAGAGGAACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GAGGGAGCTAAGGTTTTTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGAGAAAACTCAGCCTCTaGGCCCTGACTCAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: EGAKVFGLGISGVQPAVWRKLSL*ALTQAP
Trigger: TGGAGCCTGAGTCAGGGCCCAGAGGCTGAGTTTTCT...CCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAGCTCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GGGATACATTGCAGGGCCGTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTCTAAGGTTTTTGGCTTaGGAATCTCTGGGGTCCAAC +
Preference number: 4 (lower is better)
Translates to: GIHCRAVRRQQGGLGQGVLRFLA*ESLGSN
Trigger: GTTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAG...AACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGACGGCCCTGCAATGTATCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp TGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTTACATGGGTCTCCTGTAACGGGGTGAGGTaGGTCCGGACTAGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: WLGNLWGPTCSLVFTWVSCNGVR*VRTSLE
Trigger: TTCCAGGCTAGTCCGGACCCACCTCACCCCGTTACA...GGAGACCCATGTAAATACCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GCTAGGCCAAGGAGTTCCTCTCCCCATAGACCCTCCTGGGCCCTTCAAGATGAGTCTTCTCAGAGCATGTaGAAACCACTTGGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: ARPRSSSPHRPSWALQDESSQSM*KPLGEL
Trigger: CAGCTCCCCAAGTGGTTTCCACATGCTCTGAGAAGA...CTCATCTTGAAGGGCCCAGGAGGGTCTATGGGGAGAGGAACTCCTTGGCCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp CCTCTCCCCATAGACCCTCCTGGGCCCTTCAAGATGAGGGCTCCTCTTCTCAGATTTTGCGTCAGAGTGTaGCAGAGGCAGTCCCTCAAA +
Preference number: 4 (lower is better)
Translates to: PLPIDPPGPFKMRAPLLRFCVRV*QRQSLK
Trigger: TTTGAGGGACTGCCTCTGCCACACTCTGACGCAAAA...TCTGAGAAGAGGAGCCCTCATCTTGAAGGGCCCAGGAGGGTCTATGGGGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000544518.5
CDS-3UTR CCA 90 bp AGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAAATAGAAAAGGAAAGTaGTTTTGCGTCAGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: SQANTAGPAGVKRRPIHPNRKGK*FCVRVW
Trigger: CCACACTCTGACGCAAAACCACTTTCCTTTTCTATT...TGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000544518.5
3UTR CAA 72 bp CAGTCTGGTATTTACATGGGTCTCCCAGGACTGAAGTaGCCTGGCTCCTCGGCAAGAGAGCTTGCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: QSGIYMGLPGLK*PGSSARELACL
Trigger: GAGGCAAGCAAGCTCTCTTGCCGAGGAGCCAGGCAACTTCAGTCCTGGGAGACCCATGTAAATACCAGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp GGGATACATTGCAGGGCCGTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTACGAAGATGTCACAGTaGATCCTGCTGAATTTCCAC +
Preference number: 4 (lower is better)
Translates to: GIHCRAVRRQQGGLGQGVTKMSQ*ILLNFH
Trigger: GTGGAAATTCAGCAGGATTCACTGTGACATCTTCGT...AACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGACGGCCCTGCAATGTATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GGGTCCAACCTGCAGTCTGGTATTTACATGGGTCTCCCAGGACTGAAGTTGCCTCCAGGACAGATTCAGTaGATCCATCAGGGCGGTGGA +
Preference number: 4 (lower is better)
Translates to: GSNLQSGIYMGLPGLKLPPGQIQ*IHQGGG
Trigger: TCCACCGCCCTGATGGATCCACTGAATCTGTCCTGG...AGGCAACTTCAGTCCTGGGAGACCCATGTAAATACCAGACTGCAGGTTGGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp CCAGCAACCCTAGAGCCCCAGAGGAAGGTCAAGGAAGGCGGCTGCATCTTTGGTATGATGCACTCGTTCTaGTCTGCGTTATTGAGTCCG +
Preference number: 4 (lower is better)
Translates to: PATLEPQRKVKEGGCIFGMMHSF*SALLSP
Trigger: CGGACTCAATAACGCAGACCAGAACGAGTGCATCAT...ACCAAAGATGCAGCCGCCTTCCTTGACCTTCCTCTGGGGCTCTAGGGTTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GAGCTAAGGTTTTTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTCGGGTGGGCTGGTGCTaGAGAGCATCTCCATCTCCA +
Preference number: 4 (lower is better)
Translates to: ELRFLAWESLGSNLQSGIRVGWC*RASPSP
Trigger: TGGAGATGGAGATGCTCTCCAGCACCAGCCCACCCG...AATACCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp AGGGCCAGGCCAGGCCAGATGGTTTTCAGCAGCCTCTTAGCCGTGGGCTCCTCTTTTTGCCATTGGGCATaGTCTGGATCTCAAAGATCT +
Preference number: 4 (lower is better)
Translates to: RARPGQMVFSSLLAVGSSFCHWA*SGSQRS
Trigger: AGATCTTTGAGATCCAGACCATGCCCAATGGCAAAA...AGAGGAGCCCACGGCTAAGAGGCTGCTGAAAACCATCTGGCCTGGCCTGGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000544518.5
CDS-3UTR CCA 90 bp ATGAGGGCTCCTCTTCTCAGAGCATGTGGAAACCACTTGGGGAGCTGTAACGGGACACGCCGAGAACAATaGCGAGCATCTGAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: MRAPLLRACGNHLGSCNGTRREQ*RASEWL
Trigger: AAGCCACTCAGATGCTCGCCATTGTTCTCGGCGTGT...CCCGTTACAGCTCCCCAAGTGGTTTCCACATGCTCTGAGAAGAGGAGCCCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GCTAGGCCAAGGAGTTCCTCTCCCCATAGACCCTCCTGGGCCCTTCAAGATGAGTCTGGCCAGGAAAAATaGACACAAGGTGTCAGTGAG +
Preference number: 4 (lower is better)
Translates to: ARPRSSSPHRPSWALQDESGQEK*TQGVSE
Trigger: CTCACTGACACCTTGTGTCCATTTTTCCTGGCCAGA...CTCATCTTGAAGGGCCCAGGAGGGTCTATGGGGAGAGGAACTCCTTGGCCTAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542968.5
CDS-3UTR TCA 90 bp GGGAGGGAGCTAAGGTTTTTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTTGTACCTGTCGATGCTaGTGGCACACAAGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: GRELRFLAWESLGSNLQSCTCRC*WHTSSG
Trigger: TCCTGAACTTGTGTGCCATCAGCATCGACAGGTACA...AGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAGCTCCCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp TATTTACATGGGTCTCCCAGGACTGAAGTTGCCTGGCTCCTCGGCAAGAGAGCTGCTTTCTTCTCCTTCTaGTGGGAGAGCTTCCTACGG +
Preference number: 4 (lower is better)
Translates to: YLHGSPRTEVAWLLGKRAAFFSF*WESFLR
Trigger: CCGTAGGAAGCTCTCCCAGCAGAAGGAGAAGAAAGC...AGCTCTCTTGCCGAGGAGCCAGGCAACTTCAGTCCTGGGAGACCCATGTAAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp TATTTACATGGGTCTCCCAGGACTGAAGTTGCCTGGCTCCTCGGCAAGAGAGCTGTCAAGGAAGGCGGCTaGATCTTTGGTGCCAAGGAT +
Preference number: 4 (lower is better)
Translates to: YLHGSPRTEVAWLLGKRAVKEGG*IFGAKD
Trigger: ATCCTTGGCACCAAAGATGCAGCCGCCTTCCTTGAC...AGCTCTCTTGCCGAGGAGCCAGGCAACTTCAGTCCTGGGAGACCCATGTAAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp TATTTACATGGGTCTCCCAGGACTGAAGTTGCCTGGCTCCTCGGCAAGAGAGCTCGTAGAAGGAGACGATaGAGGAGTAGACCACGAAGG +
Preference number: 4 (lower is better)
Translates to: YLHGSPRTEVAWLLGKRARRRRR*RSRPRR
Trigger: CCTTCGTGGTCTACTCCTCCATCGTCTCCTTCTACG...AGCTCTCTTGCCGAGGAGCCAGGCAACTTCAGTCCTGGGAGACCCATGTAAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GAGGGAGCTAAGGTTTTTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGTCTTGGGGTGGTCTTTaGCATGCCCATTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: EGAKVFGLGISGVQPAVWSWGGL*HAHSSL
Trigger: CAGAGAAGAATGGGCATGCCAAAGACCACCCCAAGA...CCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAGCTCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GGGAGGGAGCTAAGGTTTTTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTTTGGCAATCTTGGGGTaGTCTTTGGCATGCCCATTC +
Preference number: 4 (lower is better)
Translates to: GRELRFLAWESLGSNLQSLAILG*SLACPF
Trigger: GAATGGGCATGCCAAAGACCACCCCAAGATTGCCAA...AGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAGCTCCCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GTTTTGCGTCAGAGTGTGGCAGAGGCAGTCCCTCAAAGAACCTCTGATGTCCCCAGATCTTGGCAATCTTaGGGTGGTCTTTGGCATGCC +
Preference number: 4 (lower is better)
Translates to: VLRQSVAEAVPQRTSDVPRSWQS*GGLWHA
Trigger: GGCATGCCAAAGACCACCCCAAGATTGCCAAGATCT...GGGGACATCAGAGGTTCTTTGAGGGACTGCCTCTGCCACACTCTGACGCAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000544518.5
CDS-3UTR CCA 90 bp GAGGGAGCTAAGGTTTTTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGAGATCTTGGCAATCTTaGGGTGGTCTTTGGCATGCC +
Preference number: 4 (lower is better)
Translates to: EGAKVFGLGISGVQPAVWRSWQS*GGLWHA
Trigger: GGCATGCCAAAGACCACCCCAAGATTGCCAAGATCT...CCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAGCTCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GCTAGGCCAAGGAGTTCCTCTCCCCATAGACCCTCCTGGGCCCTTCAAGATGAGGGATCTCAAAGATCTTaGCAATCTTGGGGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: ARPRSSSPHRPSWALQDEGSQRS*QSWGGL
Trigger: AAGACCACCCCAAGATTGCCAAGATCTTTGAGATCC...CTCATCTTGAAGGGCCCAGGAGGGTCTATGGGGAGAGGAACTCCTTGGCCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTCCTCTCCCCATAGACCCTTTTTGCCATTGGGCATaGTCTGGATCTCAAAGATCT +
Preference number: 4 (lower is better)
Translates to: VRRQQGGLGQGVPLPIDPFCHWA*SGSQRS
Trigger: AGATCTTTGAGATCCAGACCATGCCCAATGGCAAAA...AGGGTCTATGGGGAGAGGAACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTTACATGGGTCTCCCAGGACTTTCTTCTCCTTCTGCTaGGAGAGCTTCCTACGGCTC +
Preference number: 4 (lower is better)
Translates to: GISGVQPAVWYLHGSPRTFFSFC*ESFLRL
Trigger: GAGCCGTAGGAAGCTCTCCCAGCAGAAGGAGAAGAA...AGTCCTGGGAGACCCATGTAAATACCAGACTGCAGGTTGGACCCCAGAGATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp CCTGCAGTCTGGTATTTACATGGGTCTCCCAGGACTGAAGTTGCCTGGCTCCTCGTCCAACCTGCAGTCTaGTATTTACATGGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: PAVWYLHGSPRTEVAWLLVQPAV*YLHGSP
Trigger: GGGAGACCCATGTAAATACCAGACTGCAGGTTGGAC...GAGGAGCCAGGCAACTTCAGTCCTGGGAGACCCATGTAAATACCAGACTGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GCTAAGGTTTTTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTTACAGAAGGCAGCAGGGTaGGCTAGGCCAAGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: AKVFGLGISGVQPAVWYLQKAAG*ARPRSS
Trigger: GGAACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTG...TAAATACCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp CCTGCAGTCTGGTATTTACATGGGTCTCCCAGGACTGAAGTTGCCTGGCTCCTCCACAGTGAATCCTGCTaGATTTCCACTCACCTACCA +
Preference number: 4 (lower is better)
Translates to: PAVWYLHGSPRTEVAWLLHSESC*ISTHLP
Trigger: TGGTAGGTGAGTGGAAATTCAGCAGGATTCACTGTG...GAGGAGCCAGGCAACTTCAGTCCTGGGAGACCCATGTAAATACCAGACTGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
CDS-3UTR TCA 90 bp TATTTACATGGGTCTCCCAGGACTGAAGTTGCCTGGCTCCTCGGCAAGAGAGCTACAATGGCGAGCATCTaGGTGGCTTTCTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: YLHGSPRTEVAWLLGKRATMASI*VAFFSF
Trigger: GAAGGAGAAGAAAGCCACTCAGATGCTCGCCATTGT...AGCTCTCTTGCCGAGGAGCCAGGCAACTTCAGTCCTGGGAGACCCATGTAAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp GAGCTAAGGTTTTTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTCTCGCTTGCGGCGTCTaGGGAGGACAATGTAGATCT +
Preference number: 4 (lower is better)
Translates to: ELRFLAWESLGSNLQSGILACGV*GGQCRS
Trigger: AGATCTACATTGTCCTCCGCAGACGCCGCAAGCGAG...AATACCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp TATTTACATGGGTCTCCCAGGACTGAAGTTGCCTGGCTCCTCGGCAAGAGAGCTGGACAGGCGGGATGTTaGAGTCACAGTGTATGTTCA +
Preference number: 4 (lower is better)
Translates to: YLHGSPRTEVAWLLGKRAGQAGC*SHSVCS
Trigger: TGAACATACACTGTGACTGCAACATCCCGCCTGTCC...AGCTCTCTTGCCGAGGAGCCAGGCAACTTCAGTCCTGGGAGACCCATGTAAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp TTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTTACATGGGTCTCGTCAAGGAAGGCGGCTaGATCTTTGGTGCCAAGGAT +
Preference number: 4 (lower is better)
Translates to: LAWESLGSNLQSGIYMGLVKEGG*IFGAKD
Trigger: ATCCTTGGCACCAAAGATGCAGCCGCCTTCCTTGAC...GAGACCCATGTAAATACCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp GGGTCCAACCTGCAGTCTGGTATTTACATGGGTCTCCCAGGACTGAAGTTGCCTCTCTGGGGTCCAACCTaGAGTCTGGTATTTACATGG +
Preference number: 4 (lower is better)
Translates to: GSNLQSGIYMGLPGLKLPLWGPT*SLVFTW
Trigger: CCATGTAAATACCAGACTGCAGGTTGGACCCCAGAG...AGGCAACTTCAGTCCTGGGAGACCCATGTAAATACCAGACTGCAGGTTGGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp TCTGGTATTTACATGGGTCTCCCAGGACTGAAGTTGCCTGGCTCCTCGGCAAGAAGATCTTGGCAATCTTaGGGTGGTCTTTGGCATGCC +
Preference number: 4 (lower is better)
Translates to: SGIYMGLPGLKLPGSSARRSWQS*GGLWHA
Trigger: GGCATGCCAAAGACCACCCCAAGATTGCCAAGATCT...TCTTGCCGAGGAGCCAGGCAACTTCAGTCCTGGGAGACCCATGTAAATACCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp TGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTTACATGGGTCTCCGTCCAACCTGCAGTCTaGTATTTACATGGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: WLGNLWGPTCSLVFTWVSVQPAV*YLHGSP
Trigger: GGGAGACCCATGTAAATACCAGACTGCAGGTTGGAC...GGAGACCCATGTAAATACCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GCTAAGGTTTTTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTTATGTAACGGGGTGAGGTaGGTCCGGACTAGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: AKVFGLGISGVQPAVWYLCNGVR*VRTSLE
Trigger: TTCCAGGCTAGTCCGGACCCACCTCACCCCGTTACA...TAAATACCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTTACATGGGTCTCCCAGGACTTCTTCTCAGAGCATGTaGAAACCACTTGGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: GISGVQPAVWYLHGSPRTSSQSM*KPLGEL
Trigger: CAGCTCCCCAAGTGGTTTCCACATGCTCTGAGAAGA...AGTCCTGGGAGACCCATGTAAATACCAGACTGCAGGTTGGACCCCAGAGATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp TCAGGCTCCAGCAACCCTAGAGCCCCAGAGGAAGGTCAAGGAAGGCGGCTGCATAATAGAAAAGGAAAGTaGTTTTGCGTCAGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: SGSSNPRAPEEGQGRRLHNRKGK*FCVRVW
Trigger: CCACACTCTGACGCAAAACCACTTTCCTTTTCTATT...ATGCAGCCGCCTTCCTTGACCTTCCTCTGGGGCTCTAGGGTTGCTGGAGCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000544518.5
CDS-3UTR CCA 90 bp GGGGTCCAACCTGCAGTCTGGTATTTACATGGGTCTCCCAGGACTGAAGTTGCCTCTCCGCCTGTTCACTaGGAAACTCCCATTAGACTT +
Preference number: 4 (lower is better)
Translates to: GVQPAVWYLHGSPRTEVASPPVH*ETPIRL
Trigger: AAGTCTAATGGGAGTTTCCCAGTGAACAGGCGGAGA...GGCAACTTCAGTCCTGGGAGACCCATGTAAATACCAGACTGCAGGTTGGACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GAGGGAGCTAAGGTTTTTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGTCTCCGCCTGTTCACTaGGAAACTCCCATTAGACTT +
Preference number: 4 (lower is better)
Translates to: EGAKVFGLGISGVQPAVWSPPVH*ETPIRL
Trigger: AAGTCTAATGGGAGTTTCCCAGTGAACAGGCGGAGA...CCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAGCTCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp GAGCTAAGGTTTTTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTGCTTTCTTCTCCTTCTaGTGGGAGAGCTTCCTACGG +
Preference number: 4 (lower is better)
Translates to: ELRFLAWESLGSNLQSGIAFFSF*WESFLR
Trigger: CCGTAGGAAGCTCTCCCAGCAGAAGGAGAAGAAAGC...AATACCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp GAGCTAAGGTTTTTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTGTCAAGGAAGGCGGCTaGATCTTTGGTGCCAAGGAT +
Preference number: 4 (lower is better)
Translates to: ELRFLAWESLGSNLQSGIVKEGG*IFGAKD
Trigger: ATCCTTGGCACCAAAGATGCAGCCGCCTTCCTTGAC...AATACCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp AGGAAAGTGGTTTTGCGTCAGAGTGTGGCAGAGGCAGTCCCTCAAAGAACCTCTCTCTGGGGTCCAACCTaGAGTCTGGTATTTACATGG +
Preference number: 4 (lower is better)
Translates to: RKVVLRQSVAEAVPQRTSLWGPT*SLVFTW
Trigger: CCATGTAAATACCAGACTGCAGGTTGGACCCCAGAG...AGAGGTTCTTTGAGGGACTGCCTCTGCCACACTCTGACGCAAAACCACTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000544518.5
CDS-3UTR CCA 90 bp GGGAGGGAGCTAAGGTTTTTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGATCTCAAAGATCTTaGCAATCTTGGGGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: GRELRFLAWESLGSNLQSGSQRS*QSWGGL
Trigger: AAGACCACCCCAAGATTGCCAAGATCTTTGAGATCC...AGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAGCTCCCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GCTAAGGTTTTTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTTAAGGACTGAAGTTGCCTaGCTCCTCGGCAAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: AKVFGLGISGVQPAVWYLRTEVA*LLGKRA
Trigger: AGCTCTCTTGCCGAGGAGCCAGGCAACTTCAGTCCT...TAAATACCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp TTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTTACATGGGTCTCGTCCAACCTGCAGTCTaGTATTTACATGGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: LAWESLGSNLQSGIYMGLVQPAV*YLHGSP
Trigger: GGGAGACCCATGTAAATACCAGACTGCAGGTTGGAC...GAGACCCATGTAAATACCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GAGCTAAGGTTTTTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTTTGGCAATCTTGGGGTaGTCTTTGGCATGCCCATTC +
Preference number: 4 (lower is better)
Translates to: ELRFLAWESLGSNLQSGILAILG*SLACPF
Trigger: GAATGGGCATGCCAAAGACCACCCCAAGATTGCCAA...AATACCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp GCTAAGGTTTTTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTTATGTACCTGTCGATGCTaGTGGCACACAAGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: AKVFGLGISGVQPAVWYLCTCRC*WHTSSG
Trigger: TCCTGAACTTGTGTGCCATCAGCATCGACAGGTACA...TAAATACCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR GCA 90 bp GCTAAGGTTTTTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTTAAGGCTGGCCAGCATGTaGTGTGAGAAGGGATACATT +
Preference number: 4 (lower is better)
Translates to: AKVFGLGISGVQPAVWYLRLASM*CEKGYI
Trigger: AATGTATCCCTTCTCACAGCACATGCTGGCCAGCCT...TAAATACCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GCTAAGGTTTTTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTTATGGCGAGCATCTGAGTaGCTTTCTTCTCCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: AKVFGLGISGVQPAVWYLWRASE*LSSPSA
Trigger: AGCAGAAGGAGAAGAAAGCCACTCAGATGCTCGCCA...TAAATACCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GCTAAGGTTTTTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTTATCTTCTCAGAGCATGTaGAAACCACTTGGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: AKVFGLGISGVQPAVWYLSSQSM*KPLGEL
Trigger: CAGCTCCCCAAGTGGTTTCCACATGCTCTGAGAAGA...TAAATACCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CCA 90 bp GAGCTAAGGTTTTTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTTTTTGCCATTGGGCATaGTCTGGATCTCAAAGATCT +
Preference number: 4 (lower is better)
Translates to: ELRFLAWESLGSNLQSGIFCHWA*SGSQRS
Trigger: AGATCTTTGAGATCCAGACCATGCCCAATGGCAAAA...AATACCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAGCTC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR TCA 90 bp TTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTTACATGGGTCTCGAGCTTGAACAGAGCTaGTCCATCATTTATTTATTC +
Preference number: 4 (lower is better)
Translates to: LAWESLGSNLQSGIYMGLELEQS*SIIYLF
Trigger: GAATAAATAAATGATGGATCAGCTCTGTTCAAGCTC...GAGACCCATGTAAATACCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542968.5
CDS-3UTR CCA 90 bp GCTAAGGTTTTTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTTATTTTGCCATTGGGCATaGTCTGGATCTCAAAGATCT +
Preference number: 4 (lower is better)
Translates to: AKVFGLGISGVQPAVWYLFCHWA*SGSQRS
Trigger: AGATCTTTGAGATCCAGACCATGCCCAATGGCAAAA...TAAATACCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS TCA 90 bp CTTCAAGCCATAGGGCGCCCGGGGGCAGAGACGGCGCCGGCTGCTTaGGGCTTCCAGCTCCCGCCGCATCCACGCGCGGCCGCCCCTCCG +
Preference number: 5 (lower is better)
Translates to: LQAIGRPGAETAPAA*GFQLPPHPRAAAPP
Trigger: CGGAGGGGCGGCCGCGCGTGGATGCGGCGGGAGCTGGAAGCCTCAAGCAGCCGGCGCCGTCTCTGCCCCCGGGCGCCCTATGGCTTGAAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000362072.8
ENST00000542616.1
CDS CCA 90 bp GGTGGGACGGGTCGGGGAGAGTCAGCTGGTGGTGGCTGGGTGGGATaGGGCTGTACCGGGTCCTCTCGGGTGGGCTGGTGCTGGAGAGCA +
Preference number: 5 (lower is better)
Translates to: GGTGRGESAGGGWVG*GCTGSSRVGWCWRA
Trigger: TGCTCTCCAGCACCAGCCCACCCGAGAGGACCCGGTACAGCCCCATCCCACCCAGCCACCACCAGCTGACTCTCCCCGACCCGTCCCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS CCA 90 bp ACCATGGTGGGACGGGTCGGGGAGAGTCAGCTGGTGGTGGCTGGGTaGGATGGGGCTGTACCGGGTCCTCTCGGGTGGGCTGGTGCTGGA +
Preference number: 5 (lower is better)
Translates to: TMVGRVGESQLVVAG*DGAVPGPLGWAGAG
Trigger: TCCAGCACCAGCCCACCCGAGAGGACCCGGTACAGCCCCATCCCACCCAGCCACCACCAGCTGACTCTCCCCGACCCGTCCCACCATGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS CCA 90 bp CTGTGGAGACCATGGTGGGACGGGTCGGGGAGAGTCAGCTGGTGGTaGCTGGGTGGGATGGGGCTGTACCGGGTCCTCTCGGGTGGGCTG +
Preference number: 5 (lower is better)
Translates to: LWRPWWDGSGRVSWW*LGGMGLYRVLSGGL
Trigger: CAGCCCACCCGAGAGGACCCGGTACAGCCCCATCCCACCCAGCCACCACCAGCTGACTCTCCCCGACCCGTCCCACCATGGTCTCCACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS CCA 90 bp GTGCTGTGGAGACCATGGTGGGACGGGTCGGGGAGAGTCAGCTGGTaGTGGCTGGGTGGGATGGGGCTGTACCGGGTCCTCTCGGGTGGG +
Preference number: 5 (lower is better)
Translates to: VLWRPWWDGSGRVSW*WLGGMGLYRVLSGG
Trigger: CCCACCCGAGAGGACCCGGTACAGCCCCATCCCACCCAGCCACCACCAGCTGACTCTCCCCGACCCGTCCCACCATGGTCTCCACAGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS CCA 90 bp GGAGTGCTGTGGAGACCATGGTGGGACGGGTCGGGGAGAGTCAGCTaGTGGTGGCTGGGTGGGATGGGGCTGTACCGGGTCCTCTCGGGT +
Preference number: 5 (lower is better)
Translates to: GVLWRPWWDGSGRVS*WWLGGMGLYRVLSG
Trigger: ACCCGAGAGGACCCGGTACAGCCCCATCCCACCCAGCCACCACCAGCTGACTCTCCCCGACCCGTCCCACCATGGTCTCCACAGCACTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS CCA 90 bp CTCTCGGGTGGGCTGGTGCTGGAGAGCATCTCCATCTCCAGCTCCTaGGCTCGCCGGGCAGCCTCCTGCACCACTCTCCGCCTGTTCACT +
Preference number: 5 (lower is better)
Translates to: LSGGLVLESISISSS*ARRAASCTTLRLFT
Trigger: AGTGAACAGGCGGAGAGTGGTGCAGGAGGCTGCCCGGCGAGCCCAGGAGCTGGAGATGGAGATGCTCTCCAGCACCAGCCCACCCGAGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538967.5
CDS-3UTR CAA 90 bp GCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTTTCCCGTCTGACCCGTaGAAGGGCCGGCTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: ANTAGPAGVKRRPIHPGLFPSDP*KGRLQF
Trigger: GAACTGGAGCCGGCCCTTCAACGGGTCAGACGGGAA...AAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCGCTCGGCTGCTGCGTTaGGTGTTGACTCGCTTGCGG +
Preference number: 5 (lower is better)
Translates to: EHCRACRGEEEADPPRPSARLLR*VLTRLR
Trigger: CCGCAAGCGAGTCAACACCAAACGCAGCAGCCGAGC...GGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTCCATTCTTCTCTGGTTaGGCGGGGCTGTCGGGAGTG +
Preference number: 5 (lower is better)
Translates to: GPAGVKRRPIHPGLPAHGPFFSG*AGLSGV
Trigger: CACTCCCGACAGCCCCGCCAAACCAGAGAAGAATGG...ACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTGCCTCCTGTGGGCCTaGCAGGGTGTGAACTGTCCA +
Preference number: 5 (lower is better)
Translates to: GPAGVKRRPIHPGLPAHGCLLWA*QGVNCP
Trigger: TGGACAGTTCACACCCTGCAAGGCCCACAGGAGGCA...ACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp CAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGCTGGCCGGCCTGGGCAGGGAGGCAAGAGAGCTTGCTaGCCTCCTGTGGGCCTTGCA +
Preference number: 5 (lower is better)
Translates to: QAFLLTVRKGEAGRPGQGGKRAC*PPVGLA
Trigger: TGCAAGGCCCACAGGAGGCAAGCAAGCTCTCTTGCC...TCCCTGCCCAGGCCGGCCAGCCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS CCA 90 bp TTCTCTGGTTTGGCGGGGCTGTCGGGAGTGCTGTGGAGACCATGGTaGGACGGGTCGGGGAGAGTCAGCTGGTGGTGGCTGGGTGGGATG +
Preference number: 5 (lower is better)
Translates to: FSGLAGLSGVLWRPW*DGSGRVSWWWLGGM
Trigger: CATCCCACCCAGCCACCACCAGCTGACTCTCCCCGACCCGTCCCACCATGGTCTCCACAGCACTCCCGACAGCCCCGCCAAACCAGAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS CCA 90 bp CTCTCGGGTGGGCTGGTGCTGGAGAGCATCTCCATCTCCAGCTCCTaGGCTCGCCGGGCAGCCTCCACTCTCCGCCTGTTCACTGGGAAA +
Preference number: 5 (lower is better)
Translates to: LSGGLVLESISISSS*ARRAASTLRLFTGK
Trigger: TTTCCCAGTGAACAGGCGGAGAGTGGAGGCTGCCCGGCGAGCCCAGGAGCTGGAGATGGAGATGCTCTCCAGCACCAGCCCACCCGAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp CGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGCTCGGCTGCTGCGTTaGGTGTTGACTCGCTTGCGG +
Preference number: 5 (lower is better)
Translates to: RGEEEADPPRPSCSRFARARLLR*VLTRLR
Trigger: CCGCAAGCGAGTCAACACCAAACGCAGCAGCCGAGC...CCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS CCA 90 bp GCATGCCCATTCTTCTCTGGTTTGGCGGGGCTGTCGGGAGTGCTGTaGAGACCATGGTGGGACGGGTCGGGGAGAGTCAGCTGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: ACPFFSGLAGLSGVL*RPWWDGSGRVSWWW
Trigger: CCACCACCAGCTGACTCTCCCCGACCCGTCCCACCATGGTCTCCACAGCACTCCCGACAGCCCCGCCAAACCAGAGAAGAATGGGCATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGTTCCCGTCTGACCCGTaGAAGGGCCGGCTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: EEEADPPRPSCSRFARVRFPSDP*KGRLQF
Trigger: GAACTGGAGCCGGCCCTTCAACGGGTCAGACGGGAA...CCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGCTGTTGGTGTTGACTCGCTaGCGGCGTCTGCGGAGGACA +
Preference number: 5 (lower is better)
Translates to: EEADPPRPSCSRFARVRLLVLTR*RRLRRT
Trigger: TGTCCTCCGCAGACGCCGCAAGCGAGTCAACACCAA...CAGCCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp AACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTCTGCTGCGTTTGGTGTaGACTCGCTTGCGGCGTCTG +
Preference number: 5 (lower is better)
Translates to: NTAGPAGVKRRPIHPGLPLLRLV*TRLRRL
Trigger: CAGACGCCGCAAGCGAGTCAACACCAAACGCAGCAG...AGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGCTGCTGCGTTTGGTGTaGACTCGCTTGCGGCGTCTG +
Preference number: 5 (lower is better)
Translates to: GVKRRPIHPGLPAHGSQGLLRLV*TRLRRL
Trigger: CAGACGCCGCAAGCGAGTCAACACCAAACGCAGCAG...CCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp AGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAAGGGAGGTCCGGGTTTaGCCATTGGGCATGGTCTGG +
Preference number: 5 (lower is better)
Translates to: SQANTAGPAGVKRRPIHPREVRV*PLGMVW
Trigger: CCAGACCATGCCCAATGGCAAAACCCGGACCTCCCT...TGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGAGGGAGGTCCGGGTTTaGCCATTGGGCATGGTCTGG +
Preference number: 5 (lower is better)
Translates to: GVKRRPIHPGLPAHGSQGREVRV*PLGMVW
Trigger: CCAGACCATGCCCAATGGCAAAACCCGGACCTCCCT...CCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCTACGGCTCATGGTCTaGAGGGAGGTCCGGGTTTTG +
Preference number: 5 (lower is better)
Translates to: ANTAGPAGVKRRPIHPGLLRLMV*REVRVL
Trigger: CAAAACCCGGACCTCCCTCAAGACCATGAGCCGTAG...AAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGGGCAAGAGAGCTTGCTaGCCTCCTGTGGGCCTTGCA +
Preference number: 5 (lower is better)
Translates to: GVKRRPIHPGLPAHGSQGGKRAC*PPVGLA
Trigger: TGCAAGGCCCACAGGAGGCAAGCAAGCTCTCTTGCC...CCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGCTGGGCAAGAGAGCTTGCTaGCCTCCTGTGGGCCTTGCA +
Preference number: 5 (lower is better)
Translates to: EEADPPRPSCSRFARVRLGKRAC*PPVGLA
Trigger: TGCAAGGCCCACAGGAGGCAAGCAAGCTCTCTTGCC...CAGCCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp CCTGTGGGCCTTGCAGGGTGTGAACTGTCCATCTCTCCCCACCGCCTGCTCCACCCTCGGCAAGAGAGCTaGCTTGCCTCCTGTGGGCCT +
Preference number: 5 (lower is better)
Translates to: PVGLAGCELSISPHRLLHPRQES*LASCGP
Trigger: AGGCCCACAGGAGGCAAGCAAGCTCTCTTGCCGAGG...GTGGAGCAGGCGGTGGGGAGAGATGGACAGTTCACACCCTGCAAGGCCCACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GGACTGAAGTTGCCTGGCTCCTCGGCAAGAGAGCTTGCTTGCCTCCTGTGGGCCTTCCCGTCTGACCCGTaGAAGGGCCGGCTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: GLKLPGSSARELACLLWAFPSDP*KGRLQF
Trigger: GAACTGGAGCCGGCCCTTCAACGGGTCAGACGGGAA...GGCCCACAGGAGGCAAGCAAGCTCTCTTGCCGAGGAGCCAGGCAACTTCAGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTTCTGGTCTGCGTTATaGAGTCCGAAGAGGAGTGGG +
Preference number: 5 (lower is better)
Translates to: GPAGVKRRPIHPGLPAHGFWSAL*SPKRSG
Trigger: CCCACTCCTCTTCGGACTCAATAACGCAGACCAGAA...ACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp AGGAGCATGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCACCACGAAGGCCGGGTaGGCAATGATGCACTCGTTC +
Preference number: 5 (lower is better)
Translates to: RSMEPSEHCRACRGEEEATTKAG*AMMHSF
Trigger: GAACGAGTGCATCATTGCCAACCCGGCCTTCGTGGT...GGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCATGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGCTGCTGCGTTTGGTGTaGACTCGCTTGCGGCGTCTG +
Preference number: 5 (lower is better)
Translates to: EEEADPPRPSCSRFARVRLLRLV*TRLRRL
Trigger: CAGACGCCGCAAGCGAGTCAACACCAAACGCAGCAG...CCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp CCTGTGGGCCTTGCAGGGTGTGAACTGTCCATCTCTCCCCACCGCCTGCTCCACCCATTCTTCTCTGGTTaGGCGGGGCTGTCGGGAGTG +
Preference number: 5 (lower is better)
Translates to: PVGLAGCELSISPHRLLHPFFSG*AGLSGV
Trigger: CACTCCCGACAGCCCCGCCAAACCAGAGAAGAATGG...GTGGAGCAGGCGGTGGGGAGAGATGGACAGTTCACACCCTGCAAGGCCCACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp AGGAGCATGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCCTACGGCTCATGGTCTaGAGGGAGGTCCGGGTTTTG +
Preference number: 5 (lower is better)
Translates to: RSMEPSEHCRACRGEEEALRLMV*REVRVL
Trigger: CAAAACCCGGACCTCCCTCAAGACCATGAGCCGTAG...GGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCATGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp CCTGTGGGCCTTGCAGGGTGTGAACTGTCCATCTCTCCCCACCGCCTGCTCCACTGCCTCCTGTGGGCCTaGCAGGGTGTGAACTGTCCA +
Preference number: 5 (lower is better)
Translates to: PVGLAGCELSISPHRLLHCLLWA*QGVNCP
Trigger: TGGACAGTTCACACCCTGCAAGGCCCACAGGAGGCA...GTGGAGCAGGCGGTGGGGAGAGATGGACAGTTCACACCCTGCAAGGCCCACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GGAGCATGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGGTGAGAAGGGATACATaGCAGGGCCGTCAGAAGGCA +
Preference number: 5 (lower is better)
Translates to: GAWSQANTAGPAGVKRRPVRRDT*QGRQKA
Trigger: TGCCTTCTGACGGCCCTGCAATGTATCCCTTCTCAC...CGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCATGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS GCA 90 bp CTTTGGCATGCCCATTCTTCTCTGGTTTGGCGGGGCTGTCGGGAGTaGTGTGGAGACCATGGTGGGACGGGTCGGGGAGAGTCAGCTGGT +
Preference number: 5 (lower is better)
Translates to: LWHAHSSLVWRGCRE*CGDHGGTGRGESAG
Trigger: ACCAGCTGACTCTCCCCGACCCGTCCCACCATGGTCTCCACAGCACTCCCGACAGCCCCGCCAAACCAGAGAAGAATGGGCATGCCAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp AGGGATACATTGCAGGGCCGTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTTCCCGTCTGACCCGTaGAAGGGCCGGCTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: RDTLQGRQKAAGWARPRSFPSDP*KGRLQF
Trigger: GAACTGGAGCCGGCCCTTCAACGGGTCAGACGGGAA...ACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGACGGCCCTGCAATGTATCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GGAGCATGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGTTCTGGTCTGCGTTATaGAGTCCGAAGAGGAGTGGG +
Preference number: 5 (lower is better)
Translates to: GAWSQANTAGPAGVKRRPFWSAL*SPKRSG
Trigger: CCCACTCCTCTTCGGACTCAATAACGCAGACCAGAA...CGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCATGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp CCTGTGGGCCTTGCAGGGTGTGAACTGTCCATCTCTCCCCACCGCCTGCTCCACACCACGAAGGCCGGGTaGGCAATGATGCACTCGTTC +
Preference number: 5 (lower is better)
Translates to: PVGLAGCELSISPHRLLHTTKAG*AMMHSF
Trigger: GAACGAGTGCATCATTGCCAACCCGGCCTTCGTGGT...GTGGAGCAGGCGGTGGGGAGAGATGGACAGTTCACACCCTGCAAGGCCCACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GTTGCCTGGCTCCTCGGCAAGAGAGCTTGCTTGCCTCCTGTGGGCCTTGCAGGGACCACGAAGGCCGGGTaGGCAATGATGCACTCGTTC +
Preference number: 5 (lower is better)
Translates to: VAWLLGKRACLPPVGLAGTTKAG*AMMHSF
Trigger: GAACGAGTGCATCATTGCCAACCCGGCCTTCGTGGT...CCCTGCAAGGCCCACAGGAGGCAAGCAAGCTCTCTTGCCGAGGAGCCAGGCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp CAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTCCTCTCCCCATAGACCCTCCCTGCTGCGTTTGGTGTaGACTCGCTTGCGGCGTCTG +
Preference number: 5 (lower is better)
Translates to: QKAAGWARPRSSSPHRPSLLRLV*TRLRRL
Trigger: CAGACGCCGCAAGCGAGTCAACACCAAACGCAGCAG...GGAGGGTCTATGGGGAGAGGAACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GTGAGGTGGGTCCGGACTAGCCTGGAAAGTAGAGGTCCACATCGGGGTGCGGGACCATTCTTCTCTGGTTaGGCGGGGCTGTCGGGAGTG +
Preference number: 5 (lower is better)
Translates to: VRWVRTSLESRGPHRGAGPFFSG*AGLSGV
Trigger: CACTCCCGACAGCCCCGCCAAACCAGAGAAGAATGG...TCCCGCACCCCGATGTGGACCTCTACTTTCCAGGCTAGTCCGGACCCACCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTATCTTGGGGTGGTCTTaGGCATGCCCATTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: GPAGVKRRPIHPGLPAHGILGWS*ACPFFS
Trigger: AGAGAAGAATGGGCATGCCAAAGACCACCCCAAGAT...ACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp AGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGATCTTGGGGTGGTCTTaGGCATGCCCATTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: RACRGEEEADPPRPSCSRILGWS*ACPFFS
Trigger: AGAGAAGAATGGGCATGCCAAAGACCACCCCAAGAT...CCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp CGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGTCCGGGTTTTGCCATaGGGCATGGTCTGGATCTCA +
Preference number: 5 (lower is better)
Translates to: RGEEEADPPRPSCSRFARVRVLP*GMVWIS
Trigger: TGAGATCCAGACCATGCCCAATGGCAAAACCCGGAC...CCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp AGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGTCCGGGTTTTGCCATaGGGCATGGTCTGGATCTCA +
Preference number: 5 (lower is better)
Translates to: SQANTAGPAGVKRRPIHPVRVLP*GMVWIS
Trigger: TGAGATCCAGACCATGCCCAATGGCAAAACCCGGAC...TGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp AGGGCCAGGCCAGGCCAGATGGTTTTCAGCAGCCTCTTAGCCGTGGGCTCCTCTAGGGAGGTCCGGGTTTaGCCATTGGGCATGGTCTGG +
Preference number: 5 (lower is better)
Translates to: RARPGQMVFSSLLAVGSSREVRV*PLGMVW
Trigger: CCAGACCATGCCCAATGGCAAAACCCGGACCTCCCT...AGAGGAGCCCACGGCTAAGAGGCTGCTGAAAACCATCTGGCCTGGCCTGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000544518.5
CDS-3UTR CAA 90 bp AGGGCCAGGCCAGGCCAGATGGTTTTCAGCAGCCTCTTAGCCGTGGGCTCCTCTTGCCTCCTGTGGGCCTaGCAGGGTGTGAACTGTCCA +
Preference number: 5 (lower is better)
Translates to: RARPGQMVFSSLLAVGSSCLLWA*QGVNCP
Trigger: TGGACAGTTCACACCCTGCAAGGCCCACAGGAGGCA...AGAGGAGCCCACGGCTAAGAGGCTGCTGAAAACCATCTGGCCTGGCCTGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000544518.5
CDS-3UTR CAA 90 bp GTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTCCTCTCCCCATAGACCCTCCTCGGCAAGAGAGCTaGCTTGCCTCCTGTGGGCCT +
Preference number: 5 (lower is better)
Translates to: VRRQQGGLGQGVPLPIDPPRQES*LASCGP
Trigger: AGGCCCACAGGAGGCAAGCAAGCTCTCTTGCCGAGG...AGGGTCTATGGGGAGAGGAACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GGGATACATTGCAGGGCCGTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTCCTCGGCAAGAGAGCTaGCTTGCCTCCTGTGGGCCT +
Preference number: 5 (lower is better)
Translates to: GIHCRAVRRQQGGLGQGVPRQES*LASCGP
Trigger: AGGCCCACAGGAGGCAAGCAAGCTCTCTTGCCGAGG...AACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGACGGCCCTGCAATGTATCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTGCTAAGGTTTTTGGCTaGGGAATCTCTGGGGTCCAA +
Preference number: 5 (lower is better)
Translates to: GPAGVKRRPIHPGLPAHGAKVFG*GISGVQ
Trigger: TTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAGC...ACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCAGGGAGCTAAGGTTTTaGGCTTGGGAATCTCTGGGG +
Preference number: 5 (lower is better)
Translates to: EHCRACRGEEEADPPRPSRELRF*AWESLG
Trigger: CCCCAGAGATTCCCAAGCCAAAAACCTTAGCTCCCT...GGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GCAGTGAGGAGCATGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGCATGTGGAAACCACTaGGGGAGCTGTAACGGGGTG +
Preference number: 5 (lower is better)
Translates to: AVRSMEPSEHCRACRGEEACGNH*GSCNGV
Trigger: CACCCCGTTACAGCTCCCCAAGTGGTTTCCACATGC...CTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCATGCTCCTCACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS CCA 90 bp CTGGGGTGCTTCTCCCATTGGCCAGCTTCTGAGGTCTCAGAACCATaGCCAGTGGGCTTCCCTAGGGGCAGAAAGACCTGGCTCTGGGTC +
Preference number: 5 (lower is better)
Translates to: LGCFSHWPASEVSEP*PVGFPRGRKTWLWV
Trigger: GACCCAGAGCCAGGTCTTTCTGCCCCTAGGGAAGCCCACTGGCCATGGTTCTGAGACCTCAGAAGCTGGCCAATGGGAGAAGCACCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540600.5
CDS-3UTR CAA 90 bp GAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGCTGTTCTGGTCTGCGTTATaGAGTCCGAAGAGGAGTGGG +
Preference number: 5 (lower is better)
Translates to: EEADPPRPSCSRFARVRLFWSAL*SPKRSG
Trigger: CCCACTCCTCTTCGGACTCAATAACGCAGACCAGAA...CAGCCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GATACATTGCAGGGCCGTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTCCTTGGTGTTGACTCGCTaGCGGCGTCTGCGGAGGACA +
Preference number: 5 (lower is better)
Translates to: DTLQGRQKAAGWARPRSSLVLTR*RRLRRT
Trigger: TGTCCTCCGCAGACGCCGCAAGCGAGTCAACACCAA...GGAACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGACGGCCCTGCAATGTATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp AGGGATACATTGCAGGGCCGTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTCCATTCTTCTCTGGTTaGGCGGGGCTGTCGGGAGTG +
Preference number: 5 (lower is better)
Translates to: RDTLQGRQKAAGWARPRSPFFSG*AGLSGV
Trigger: CACTCCCGACAGCCCCGCCAAACCAGAGAAGAATGG...ACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGACGGCCCTGCAATGTATCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGCTGGCAAGATCTTGGCAATCTaGGGGTGGTCTTTGGCATGC +
Preference number: 5 (lower is better)
Translates to: GGRSTQAFLLTVRKGEAGKILAI*GWSLAC
Trigger: GCATGCCAAAGACCACCCCAAGATTGCCAAGATCTT...GCCAGCCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp AGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTGGATCTCAAAGATCTaGGCAATCTTGGGGTGGTCT +
Preference number: 5 (lower is better)
Translates to: RACRGEEEADPPRPSCSRWISKI*AILGWS
Trigger: AGACCACCCCAAGATTGCCAAGATCTTTGAGATCCA...CCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp AGGAGCATGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCAGGACAGGCGGGATGTaGCAGTCACAGTGTATGTTC +
Preference number: 5 (lower is better)
Translates to: RSMEPSEHCRACRGEEEARTGGM*QSQCMF
Trigger: GAACATACACTGTGACTGCAACATCCCGCCTGTCCT...GGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCATGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGCTGAGGACAGGCGGGATGTaGCAGTCACAGTGTATGTTC +
Preference number: 5 (lower is better)
Translates to: EEADPPRPSCSRFARVRLRTGGM*QSQCMF
Trigger: GAACATACACTGTGACTGCAACATCCCGCCTGTCCT...CAGCCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp AGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGATCTTCAGGAAGGCCTaGCGGAACTCAATGTTGAAG +
Preference number: 5 (lower is better)
Translates to: RACRGEEEADPPRPSCSRIFRKA*RNSMLK
Trigger: CTTCAACATTGAGTTCCGCAAGGCCTTCCTGAAGAT...CCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GTGAGGTGGGTCCGGACTAGCCTGGAAAGTAGAGGTCCACATCGGGGTGCGGGAGCATGTGGAAACCACTaGGGGAGCTGTAACGGGGTG +
Preference number: 5 (lower is better)
Translates to: VRWVRTSLESRGPHRGAGACGNH*GSCNGV
Trigger: CACCCCGTTACAGCTCCCCAAGTGGTTTCCACATGC...TCCCGCACCCCGATGTGGACCTCTACTTTCCAGGCTAGTCCGGACCCACCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GTTGCCTGGCTCCTCGGCAAGAGAGCTTGCTTGCCTCCTGTGGGCCTTGCAGGGGTGAGAAGGGATACATaGCAGGGCCGTCAGAAGGCA +
Preference number: 5 (lower is better)
Translates to: VAWLLGKRACLPPVGLAGVRRDT*QGRQKA
Trigger: TGCCTTCTGACGGCCCTGCAATGTATCCCTTCTCAC...CCCTGCAAGGCCCACAGGAGGCAAGCAAGCTCTCTTGCCGAGGAGCCAGGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp TTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTTACATGGGTCTCGACGGCGCCGGCTGCTaGAGGCTTCCAGCTCCCGCC +
Preference number: 5 (lower is better)
Translates to: LAWESLGSNLQSGIYMGLDGAGC*RLPAPA
Trigger: GGCGGGAGCTGGAAGCCTCAAGCAGCCGGCGCCGTC...GAGACCCATGTAAATACCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362072.8
CDS GCA 90 bp AAGGGCTGCCCGCCTCAGACAGGGATAGGGAAGCGCTCTGTCTGGTaGTTAGAGGTGTCTCTTGTCTCCGCATACCACCCTAGAGGGGCT +
Preference number: 5 (lower is better)
Translates to: KGCPPQTGIGKRSVW*LEVSLVSAYHPRGA
Trigger: AGCCCCTCTAGGGTGGTATGCGGAGACAAGAGACACCTCTAAGCACCAGACAGAGCGCTTCCCTATCCCTGTCTGAGGCGGGCAGCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542616.1
CDS GCA 90 bp TGGGTGGCCAGGCTCTCTGCTCTTCAAGAGGAAGCACTCAAGGGCTaGCCGCCTCAGACAGGGATAGGGAAGCGCTCTGTCTGGTGCTTA +
Preference number: 5 (lower is better)
Translates to: WVARLSALQEEALKG*PPQTGIGKRSVWCL
Trigger: TAAGCACCAGACAGAGCGCTTCCCTATCCCTGTCTGAGGCGGGCAGCCCTTGAGTGCTTCCTCTTGAAGAGCAGAGAGCCTGGCCACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542616.1
CDS CCA 90 bp TGGCAATCTTGGGGTGGTCTTTGGCATGCCCATTCTTCTCTGGTTTaGCGGGGCTGTCGGGAGTGCTGTGGAGACCATGGTGGGACGGGT +
Preference number: 5 (lower is better)
Translates to: WQSWGGLWHAHSSLV*RGCRECCGDHGGTG
Trigger: ACCCGTCCCACCATGGTCTCCACAGCACTCCCGACAGCCCCGCCAAACCAGAGAAGAATGGGCATGCCAAAGACCACCCCAAGATTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS CCA 90 bp CTCAAGGGCTGCCCGCCTCAGACAGGGATAGGGAAGCGCTCTGTCTaGTGCTTAGAGGTGTCTCTTGTCTCCGCATACCACCCTAGAGGG +
Preference number: 5 (lower is better)
Translates to: LKGCPPQTGIGKRSV*CLEVSLVSAYHPRG
Trigger: CCCTCTAGGGTGGTATGCGGAGACAAGAGACACCTCTAAGCACCAGACAGAGCGCTTCCCTATCCCTGTCTGAGGCGGGCAGCCCTTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542616.1
CDS-3UTR CAA 90 bp GTGAGGAGCATGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGTTCTGGTCTGCGTTATaGAGTCCGAAGAGGAGTGGG +
Preference number: 5 (lower is better)
Translates to: VRSMEPSEHCRACRGEEEFWSAL*SPKRSG
Trigger: CCCACTCCTCTTCGGACTCAATAACGCAGACCAGAA...CTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCATGCTCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp CCAGCAACCCTAGAGCCCCAGAGGAAGGTCAAGGAAGGCGGCTGCATCTTTGGTTTGGTGTTGACTCGCTaGCGGCGTCTGCGGAGGACA +
Preference number: 5 (lower is better)
Translates to: PATLEPQRKVKEGGCIFGLVLTR*RRLRRT
Trigger: TGTCCTCCGCAGACGCCGCAAGCGAGTCAACACCAA...ACCAAAGATGCAGCCGCCTTCCTTGACCTTCCTCTGGGGCTCTAGGGTTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GCTAGGCCAAGGAGTTCCTCTCCCCATAGACCCTCCTGGGCCCTTCAAGATGAGCCATTCTTCTCTGGTTaGGCGGGGCTGTCGGGAGTG +
Preference number: 5 (lower is better)
Translates to: ARPRSSSPHRPSWALQDEPFFSG*AGLSGV
Trigger: CACTCCCGACAGCCCCGCCAAACCAGAGAAGAATGG...CTCATCTTGAAGGGCCCAGGAGGGTCTATGGGGAGAGGAACTCCTTGGCCTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp AACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTATCTTGGGGTGGTCTTaGGCATGCCCATTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: NTAGPAGVKRRPIHPGLPILGWS*ACPFFS
Trigger: AGAGAAGAATGGGCATGCCAAAGACCACCCCAAGAT...AGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GGGGTGAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGAAGATCTTGGCAATCTaGGGGTGGTCTTTGGCATGC +
Preference number: 5 (lower is better)
Translates to: GVKRRPIHPGLPAHGSQGKILAI*GWSLAC
Trigger: GCATGCCAAAGACCACCCCAAGATTGCCAAGATCTT...CCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGCTGAAGATCTTGGCAATCTaGGGGTGGTCTTTGGCATGC +
Preference number: 5 (lower is better)
Translates to: EEADPPRPSCSRFARVRLKILAI*GWSLAC
Trigger: GCATGCCAAAGACCACCCCAAGATTGCCAAGATCTT...CAGCCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GTTGCCTGGCTCCTCGGCAAGAGAGCTTGCTTGCCTCCTGTGGGCCTTGCAGGGAGGGAGCTAAGGTTTTaGGCTTGGGAATCTCTGGGG +
Preference number: 5 (lower is better)
Translates to: VAWLLGKRACLPPVGLAGRELRF*AWESLG
Trigger: CCCCAGAGATTCCCAAGCCAAAAACCTTAGCTCCCT...CCCTGCAAGGCCCACAGGAGGCAAGCAAGCTCTCTTGCCGAGGAGCCAGGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp AGGGATACATTGCAGGGCCGTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTGCATGTGGAAACCACTaGGGGAGCTGTAACGGGGTG +
Preference number: 5 (lower is better)
Translates to: RDTLQGRQKAAGWARPRSACGNH*GSCNGV
Trigger: CACCCCGTTACAGCTCCCCAAGTGGTTTCCACATGC...ACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGACGGCCCTGCAATGTATCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTCCTCTCCCCATAGACCCTGCATGTGGAAACCACTaGGGGAGCTGTAACGGGGTG +
Preference number: 5 (lower is better)
Translates to: VRRQQGGLGQGVPLPIDPACGNH*GSCNGV
Trigger: CACCCCGTTACAGCTCCCCAAGTGGTTTCCACATGC...AGGGTCTATGGGGAGAGGAACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS TCA 90 bp CAGTGTGGCATAGTAGTTGTAGTGGGGTCTGTCCGCCTTCCCGTCTaGCCCGTTGAAGGGCCGGCTCCAGTTCTGCCTCTCCAGATCATC +
Preference number: 5 (lower is better)
Translates to: QCGIVVVVGSVRLPV*PVEGPAPVLPLQII
Trigger: GATGATCTGGAGAGGCAGAACTGGAGCCGGCCCTTCAACGGGTCAGACGGGAAGGCGGACAGACCCCACTACAACTACTATGCCACACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000540600.5
ENST00000542968.5
ENST00000543292.1
ENST00000544518.5
CDS TCA 90 bp TGGGCTTCCCTAGGGGCAGAAAGACCTGGCTCTGGGTCCCTGGCCTaGGCACTTACCACTCTCCGCCTGTTCACTGGGAAACTCCCATTA +
Preference number: 5 (lower is better)
Translates to: WASLGAERPGSGSLA*ALTTLRLFTGKLPL
Trigger: TAATGGGAGTTTCCCAGTGAACAGGCGGAGAGTGGTAAGTGCTCAGGCCAGGGACCCAGAGCCAGGTCTTTCTGCCCCTAGGGAAGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540600.5
CDS CCA 90 bp GATCATCATCATACCAGGACAGATTCAGTGGATCCATCAGGGCGGTaGAGCCACTGGGTGGCCAGGCTCGTCTGCTCGCCAGTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: DHHHTRTDSVDPSGR*SHWVARLVCSPVFS
Trigger: GGAGAAGACTGGCGAGCAGACGAGCCTGGCCACCCAGTGGCTCCACCGCCCTGATGGATCCACTGAATCTGTCCTGGTATGATGATGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540600.5
CDS CCA 90 bp CCAGGACAGATTCAGTGGATCCATCAGGGCGGTGGAGCCACTGGGTaGCCAGGCTCTGGCCAGGAAAAATGGACACAAGGTGTCAGTGAG +
Preference number: 5 (lower is better)
Translates to: PGQIQWIHQGGGATG*PGSGQEKWTQGVSE
Trigger: CTCACTGACACCTTGTGTCCATTTTTCCTGGCCAGAGCCTGGCCACCCAGTGGCTCCACCGCCCTGATGGATCCACTGAATCTGTCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542968.5
CDS CCA 90 bp CCAGTTCTGCCTCTCCAGATCATCATCATACCAGGACAGATTCAGTaGATCCATCAGGGCGGTGGAGCCACTGGGTGGCCAGGCTCTGGC +
Preference number: 5 (lower is better)
Translates to: PVLPLQIIIIPGQIQ*IHQGGGATGWPGSG
Trigger: GCCAGAGCCTGGCCACCCAGTGGCTCCACCGCCCTGATGGATCCACTGAATCTGTCCTGGTATGATGATGATCTGGAGAGGCAGAACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542968.5
CDS-3UTR CAA 90 bp GGGAGGGAGCTAAGGTTTTTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTTTCCCGTCTGACCCGTaGAAGGGCCGGCTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: GRELRFLAWESLGSNLQSFPSDP*KGRLQF
Trigger: GAACTGGAGCCGGCCCTTCAACGGGTCAGACGGGAA...AGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAGCTCCCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp CCTGCAGTCTGGTATTTACATGGGTCTCCCAGGACTGAAGTTGCCTGGCTCCTCGCTCGGCTGCTGCGTTaGGTGTTGACTCGCTTGCGG +
Preference number: 5 (lower is better)
Translates to: PAVWYLHGSPRTEVAWLLARLLR*VLTRLR
Trigger: CCGCAAGCGAGTCAACACCAAACGCAGCAGCCGAGC...GAGGAGCCAGGCAACTTCAGTCCTGGGAGACCCATGTAAATACCAGACTGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp TGGAGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACATCTTCAGGAAGGCCTaGCGGAACTCAATGTTGAAG +
Preference number: 5 (lower is better)
Translates to: WSQANTAGPAGVKRRPIHIFRKA*RNSMLK
Trigger: CTTCAACATTGAGTTCCGCAAGGCCTTCCTGAAGAT...GTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp AGCCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAATCTTCAGGAAGGCCTaGCGGAACTCAATGTTGAAG +
Preference number: 5 (lower is better)
Translates to: SQANTAGPAGVKRRPIHPIFRKA*RNSMLK
Trigger: CTTCAACATTGAGTTCCGCAAGGCCTTCCTGAAGAT...TGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS GCA 90 bp CTGTCCGCCTTCCCGTCTGACCCGTTGAAGGGCCGGCTCCAGTTCTaGCTCTCCAGATCATCATCATACCAGGACAGATTCAGTGGATCC +
Preference number: 5 (lower is better)
Translates to: LSAFPSDPLKGRLQF*LSRSSSYQDRFSGS
Trigger: GGATCCACTGAATCTGTCCTGGTATGATGATGATCTGGAGAGGCAGAACTGGAGCCGGCCCTTCAACGGGTCAGACGGGAAGGCGGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000540600.5
ENST00000542968.5
ENST00000543292.1
ENST00000544518.5
CDS CCA 90 bp GATCTTGGCAATCTTGGGGTGGTCTTTGGCATGCCCATTCTTCTCTaGTTTGGCGGGGCTGTCGGGAGTGCTGTGGAGACCATGGTGGGA +
Preference number: 5 (lower is better)
Translates to: DLGNLGVVFGMPILL*FGGAVGSAVETMVG
Trigger: TCCCACCATGGTCTCCACAGCACTCCCGACAGCCCCGCCAAACCAGAGAAGAATGGGCATGCCAAAGACCACCCCAAGATTGCCAAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS CCA 90 bp CCAGTTCTGCCTCTCCAGATCATCATCATACCAGGACAGATTCAGTaGATCCATCAGGGCGGTGGAGCCACTGGGTGGCCAGGCTCGTCT +
Preference number: 5 (lower is better)
Translates to: PVLPLQIIIIPGQIQ*IHQGGGATGWPGSS
Trigger: AGACGAGCCTGGCCACCCAGTGGCTCCACCGCCCTGATGGATCCACTGAATCTGTCCTGGTATGATGATGATCTGGAGAGGCAGAACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540600.5
CDS CCA 90 bp CATACCAGGACAGATTCAGTGGATCCATCAGGGCGGTGGAGCCACTaGGTGGCCAGGCTCTGGCCAGGAAAAATGGACACAAGGTGTCAG +
Preference number: 5 (lower is better)
Translates to: HTRTDSVDPSGRWSH*VARLWPGKMDTRCQ
Trigger: CTGACACCTTGTGTCCATTTTTCCTGGCCAGAGCCTGGCCACCCAGTGGCTCCACCGCCCTGATGGATCCACTGAATCTGTCCTGGTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542968.5
CDS CCA 90 bp CCAGTTCTGCCTCTCCAGATCATCATCATACCAGGACAGATTCAGTaGATCCATCAGGGCGGTGGAGCCACTGGGTGGCCAGGCTCTTGC +
Preference number: 5 (lower is better)
Translates to: PVLPLQIIIIPGQIQ*IHQGGGATGWPGSC
Trigger: GCAAGAGCCTGGCCACCCAGTGGCTCCACCGCCCTGATGGATCCACTGAATCTGTCCTGGTATGATGATGATCTGGAGAGGCAGAACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543292.1
CDS-3UTR CAA 90 bp GGGATACATTGCAGGGCCGTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTTTCTGGTCTGCGTTATaGAGTCCGAAGAGGAGTGGG +
Preference number: 5 (lower is better)
Translates to: GIHCRAVRRQQGGLGQGVFWSAL*SPKRSG
Trigger: CCCACTCCTCTTCGGACTCAATAACGCAGACCAGAA...AACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGACGGCCCTGCAATGTATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GGGGTCCAACCTGCAGTCTGGTATTTACATGGGTCTCCCAGGACTGAAGTTGCCTTGGTGTTGACTCGCTaGCGGCGTCTGCGGAGGACA +
Preference number: 5 (lower is better)
Translates to: GVQPAVWYLHGSPRTEVALVLTR*RRLRRT
Trigger: TGTCCTCCGCAGACGCCGCAAGCGAGTCAACACCAA...GGCAACTTCAGTCCTGGGAGACCCATGTAAATACCAGACTGCAGGTTGGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp TGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTTACATGGGTCTCCGCTCGGCTGCTGCGTTaGGTGTTGACTCGCTTGCGG +
Preference number: 5 (lower is better)
Translates to: WLGNLWGPTCSLVFTWVSARLLR*VLTRLR
Trigger: CCGCAAGCGAGTCAACACCAAACGCAGCAGCCGAGC...GGAGACCCATGTAAATACCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GGGTCCAACCTGCAGTCTGGTATTTACATGGGTCTCCCAGGACTGAAGTTGCCTGCTCGGCTGCTGCGTTaGGTGTTGACTCGCTTGCGG +
Preference number: 5 (lower is better)
Translates to: GSNLQSGIYMGLPGLKLPARLLR*VLTRLR
Trigger: CCGCAAGCGAGTCAACACCAAACGCAGCAGCCGAGC...AGGCAACTTCAGTCCTGGGAGACCCATGTAAATACCAGACTGCAGGTTGGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GCCGTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTCCTCTCCCCATAGACAAGATCTTGGCAATCTaGGGGTGGTCTTTGGCATGC +
Preference number: 5 (lower is better)
Translates to: AVRRQQGGLGQGVPLPIDKILAI*GWSLAC
Trigger: GCATGCCAAAGACCACCCCAAGATTGCCAAGATCTT...GTCTATGGGGAGAGGAACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGACGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGTGGATCTCAAAGATCTaGGCAATCTTGGGGTGGTCT +
Preference number: 5 (lower is better)
Translates to: EEEADPPRPSCSRFARVRWISKI*AILGWS
Trigger: AGACCACCCCAAGATTGCCAAGATCTTTGAGATCCA...CCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp CCAGCAACCCTAGAGCCCCAGAGGAAGGTCAAGGAAGGCGGCTGCATCTTTGGTGTCCGGGTTTTGCCATaGGGCATGGTCTGGATCTCA +
Preference number: 5 (lower is better)
Translates to: PATLEPQRKVKEGGCIFGVRVLP*GMVWIS
Trigger: TGAGATCCAGACCATGCCCAATGGCAAAACCCGGAC...ACCAAAGATGCAGCCGCCTTCCTTGACCTTCCTCTGGGGCTCTAGGGTTGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GAAGAGGAGGCCGATCCACCCAGGCCTTCCTGCTCACGGTTCGCAAGGGTGAGGATCTTCAGGAAGGCCTaGCGGAACTCAATGTTGAAG +
Preference number: 5 (lower is better)
Translates to: EEEADPPRPSCSRFARVRIFRKA*RNSMLK
Trigger: CTTCAACATTGAGTTCCGCAAGGCCTTCCTGAAGAT...CCTCACCCTTGCGAACCGTGAGCAGGAAGGCCTGGGTGGATCGGCCTCCTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTCCTCTCCCCATAGACCCTAGGGAGCTAAGGTTTTaGGCTTGGGAATCTCTGGGG +
Preference number: 5 (lower is better)
Translates to: VRRQQGGLGQGVPLPIDPRELRF*AWESLG
Trigger: CCCCAGAGATTCCCAAGCCAAAAACCTTAGCTCCCT...AGGGTCTATGGGGAGAGGAACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GCTAGGCCAAGGAGTTCCTCTCCCCATAGACCCTCCTGGGCCCTTCAAGATGAGGTGAGAAGGGATACATaGCAGGGCCGTCAGAAGGCA +
Preference number: 5 (lower is better)
Translates to: ARPRSSSPHRPSWALQDEVRRDT*QGRQKA
Trigger: TGCCTTCTGACGGCCCTGCAATGTATCCCTTCTCAC...CTCATCTTGAAGGGCCCAGGAGGGTCTATGGGGAGAGGAACTCCTTGGCCTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS TCA 90 bp CATAGTAGTTGTAGTGGGGTCTGTCCGCCTTCCCGTCTGACCCGTTaGAGGGCCGGCTCCAGTTCTGCCTCTCCAGATCATCATCATACC +
Preference number: 5 (lower is better)
Translates to: HSSCSGVCPPSRLTR*RAGSSSASPDHHHT
Trigger: GGTATGATGATGATCTGGAGAGGCAGAACTGGAGCCGGCCCTTCAACGGGTCAGACGGGAAGGCGGACAGACCCCACTACAACTACTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000540600.5
ENST00000542968.5
ENST00000543292.1
ENST00000544518.5
CDS TCA 90 bp TGGGTGGCCAGGCTCTGGCCAGGAAAAATGGACACAAGGTGTCAGTaGGAGGGCCTCTTGCAGAGGTCTCCAGGAAGAAGACCAACTCCT +
Preference number: 5 (lower is better)
Translates to: WVARLWPGKMDTRCQ*EGLLQRSPGRRPTP
Trigger: AGGAGTTGGTCTTCTTCCTGGAGACCTCTGCAAGAGGCCCTCTCACTGACACCTTGTGTCCATTTTTCCTGGCCAGAGCCTGGCCACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542968.5
CDS GCA 90 bp GTACACATCCATGCCTTGCAGAACCGAGGTGTCTCACTTCATGCCTaGTTGGAGGTGTGCACGGTGAGTCTGCCTTCAGCTGAGGCAAGG +
Preference number: 5 (lower is better)
Translates to: VHIHALQNRGVSLHA*LEVCTVSLPSAEAR
Trigger: CCTTGCCTCAGCTGAAGGCAGACTCACCGTGCACACCTCCAAGCAGGCATGAAGTGAGACACCTCGGTTCTGCAAGGCATGGATGTGTAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540600.5
CDS CCA 90 bp CCAGTTCTGCCTCTCCAGATCATCATCATACCAGGACAGATTCAGTaGATCCATCAGGGCGGTGGAGCCACTGGGTGGCCAGGCTCTTCA +
Preference number: 5 (lower is better)
Translates to: PVLPLQIIIIPGQIQ*IHQGGGATGWPGSS
Trigger: TGAAGAGCCTGGCCACCCAGTGGCTCCACCGCCCTGATGGATCCACTGAATCTGTCCTGGTATGATGATGATCTGGAGAGGCAGAACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346454.7
ENST00000362072.8
CDS-3UTR CAA 90 bp GAGGGAGCTAAGGTTTTTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGACCACGAAGGCCGGGTaGGCAATGATGCACTCGTTC +
Preference number: 5 (lower is better)
Translates to: EGAKVFGLGISGVQPAVWTTKAG*AMMHSF
Trigger: GAACGAGTGCATCATTGCCAACCCGGCCTTCGTGGT...CCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAGCTCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GGGTCCAACCTGCAGTCTGGTATTTACATGGGTCTCCCAGGACTGAAGTTGCCTAGGGAGGTCCGGGTTTaGCCATTGGGCATGGTCTGG +
Preference number: 5 (lower is better)
Translates to: GSNLQSGIYMGLPGLKLPREVRV*PLGMVW
Trigger: CCAGACCATGCCCAATGGCAAAACCCGGACCTCCCT...AGGCAACTTCAGTCCTGGGAGACCCATGTAAATACCAGACTGCAGGTTGGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp CCTGCAGTCTGGTATTTACATGGGTCTCCCAGGACTGAAGTTGCCTGGCTCCTCCTACGGCTCATGGTCTaGAGGGAGGTCCGGGTTTTG +
Preference number: 5 (lower is better)
Translates to: PAVWYLHGSPRTEVAWLLLRLMV*REVRVL
Trigger: CAAAACCCGGACCTCCCTCAAGACCATGAGCCGTAG...GAGGAGCCAGGCAACTTCAGTCCTGGGAGACCCATGTAAATACCAGACTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp CCTCTCCCCATAGACCCTCCTGGGCCCTTCAAGATGAGGGCTCCTCTTCTCAGAAGGACAGGCGGGATGTaGCAGTCACAGTGTATGTTC +
Preference number: 5 (lower is better)
Translates to: PLPIDPPGPFKMRAPLLRRTGGM*QSQCMF
Trigger: GAACATACACTGTGACTGCAACATCCCGCCTGTCCT...TCTGAGAAGAGGAGCCCTCATCTTGAAGGGCCCAGGAGGGTCTATGGGGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GCTAGGCCAAGGAGTTCCTCTCCCCATAGACCCTCCTGGGCCCTTCAAGATGAGAGGACAGGCGGGATGTaGCAGTCACAGTGTATGTTC +
Preference number: 5 (lower is better)
Translates to: ARPRSSSPHRPSWALQDERTGGM*QSQCMF
Trigger: GAACATACACTGTGACTGCAACATCCCGCCTGTCCT...CTCATCTTGAAGGGCCCAGGAGGGTCTATGGGGAGAGGAACTCCTTGGCCTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp TGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTTACATGGGTCTCCGGCAAGAGAGCTTGCTaGCCTCCTGTGGGCCTTGCA +
Preference number: 5 (lower is better)
Translates to: WLGNLWGPTCSLVFTWVSGKRAC*PPVGLA
Trigger: TGCAAGGCCCACAGGAGGCAAGCAAGCTCTCTTGCC...GGAGACCCATGTAAATACCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp TCAGGCTCCAGCAACCCTAGAGCCCCAGAGGAAGGTCAAGGAAGGCGGCTGCATGCTAAGGTTTTTGGCTaGGGAATCTCTGGGGTCCAA +
Preference number: 5 (lower is better)
Translates to: SGSSNPRAPEEGQGRRLHAKVFG*GISGVQ
Trigger: TTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAGC...ATGCAGCCGCCTTCCTTGACCTTCCTCTGGGGCTCTAGGGTTGCTGGAGCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp CCAAGCGAACACTGCAGGGCCTGCCGGGGTGAAGAGGAGGCCGATCCACCCAGGCATAATAAGATGAGCTaGAACAGAGCTGATCCATCA +
Preference number: 5 (lower is better)
Translates to: PSEHCRACRGEEEADPPRHNKMS*NRADPS
Trigger: TGATGGATCAGCTCTGTTCAAGCTCATCTTATTATG...CCTGGGTGGATCGGCCTCCTCTTCACCCCGGCAGGCCCTGCAGTGTTCGCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542968.5
CDS GCA 90 bp GTCTGGATCTCAAAGATCTTGGCAATCTTGGGGTGGTCTTTGGCATaGCCATTCTTCTCTGGTTTGGCGGGGCTGTCGGGAGTGCTGTGG +
Preference number: 5 (lower is better)
Translates to: VWISKILAILGWSLA*PFFSGLAGLSGVLW
Trigger: CCACAGCACTCCCGACAGCCCCGCCAAACCAGAGAAGAATGGGCATGCCAAAGACCACCCCAAGATTGCCAAGATCTTTGAGATCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS CCA 90 bp GCATGGTCTGGATCTCAAAGATCTTGGCAATCTTGGGGTGGTCTTTaGCATGCCCATTCTTCTCTGGTTTGGCGGGGCTGTCGGGAGTGC +
Preference number: 5 (lower is better)
Translates to: AWSGSQRSWQSWGGL*HAHSSLVWRGCREC
Trigger: GCACTCCCGACAGCCCCGCCAAACCAGAGAAGAATGGGCATGCCAAAGACCACCCCAAGATTGCCAAGATCTTTGAGATCCAGACCATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS CCA 90 bp GATCATCATCATACCAGGACAGATTCAGTGGATCCATCAGGGCGGTaGAGCCACTGGGTGGCCAGGCTCTGGCCAGGAAAAATGGACACA +
Preference number: 5 (lower is better)
Translates to: DHHHTRTDSVDPSGR*SHWVARLWPGKMDT
Trigger: TGTGTCCATTTTTCCTGGCCAGAGCCTGGCCACCCAGTGGCTCCACCGCCCTGATGGATCCACTGAATCTGTCCTGGTATGATGATGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542968.5
CDS-3UTR CAA 90 bp AGGAAAGTGGTTTTGCGTCAGAGTGTGGCAGAGGCAGTCCCTCAAAGAACCTCTCTGCTGCGTTTGGTGTaGACTCGCTTGCGGCGTCTG +
Preference number: 5 (lower is better)
Translates to: RKVVLRQSVAEAVPQRTSLLRLV*TRLRRL
Trigger: CAGACGCCGCAAGCGAGTCAACACCAAACGCAGCAG...AGAGGTTCTTTGAGGGACTGCCTCTGCCACACTCTGACGCAAAACCACTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000544518.5
CDS-3UTR CAA 90 bp GCTAGGCCAAGGAGTTCCTCTCCCCATAGACCCTCCTGGGCCCTTCAAGATGAGATCTTGGGGTGGTCTTaGGCATGCCCATTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: ARPRSSSPHRPSWALQDEILGWS*ACPFFS
Trigger: AGAGAAGAATGGGCATGCCAAAGACCACCCCAAGAT...CTCATCTTGAAGGGCCCAGGAGGGTCTATGGGGAGAGGAACTCCTTGGCCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GTCAGAAGGCAGCAGGGTGGGCTAGGCCAAGGAGTTCCTCTCCCCATAGACCCTTGGATCTCAAAGATCTaGGCAATCTTGGGGTGGTCT +
Preference number: 5 (lower is better)
Translates to: VRRQQGGLGQGVPLPIDPWISKI*AILGWS
Trigger: AGACCACCCCAAGATTGCCAAGATCTTTGAGATCCA...AGGGTCTATGGGGAGAGGAACTCCTTGGCCTAGCCCACCCTGCTGCCTTCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp TATTTACATGGGTCTCCCAGGACTGAAGTTGCCTGGCTCCTCGGCAAGAGAGCTCTACGGCTCATGGTCTaGAGGGAGGTCCGGGTTTTG +
Preference number: 5 (lower is better)
Translates to: YLHGSPRTEVAWLLGKRALRLMV*REVRVL
Trigger: CAAAACCCGGACCTCCCTCAAGACCATGAGCCGTAG...AGCTCTCTTGCCGAGGAGCCAGGCAACTTCAGTCCTGGGAGACCCATGTAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp TCTGGTATTTACATGGGTCTCCCAGGACTGAAGTTGCCTGGCTCCTCGGCAAGACTACGGCTCATGGTCTaGAGGGAGGTCCGGGTTTTG +
Preference number: 5 (lower is better)
Translates to: SGIYMGLPGLKLPGSSARLRLMV*REVRVL
Trigger: CAAAACCCGGACCTCCCTCAAGACCATGAGCCGTAG...TCTTGCCGAGGAGCCAGGCAACTTCAGTCCTGGGAGACCCATGTAAATACCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GTTTTGCGTCAGAGTGTGGCAGAGGCAGTCCCTCAAAGAACCTCTGATGTCCCCGTGAGAAGGGATACATaGCAGGGCCGTCAGAAGGCA +
Preference number: 5 (lower is better)
Translates to: VLRQSVAEAVPQRTSDVPVRRDT*QGRQKA
Trigger: TGCCTTCTGACGGCCCTGCAATGTATCCCTTCTCAC...GGGGACATCAGAGGTTCTTTGAGGGACTGCCTCTGCCACACTCTGACGCAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000544518.5
CDS TCA 90 bp CTTTCTTCTCCTTCTGCTGGGAGAGCTTCCTACGGCTCATGGTCTTaGGGGAGGTCCGGGTTTTGCCATTGGGCATGGTCTGGATCTCAA +
Preference number: 5 (lower is better)
Translates to: LSSPSAGRASYGSWS*GRSGFCHWAWSGSQ
Trigger: TTGAGATCCAGACCATGCCCAATGGCAAAACCCGGACCTCCCTCAAGACCATGAGCCGTAGGAAGCTCTCCCAGCAGAAGGAGAAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS CCA 90 bp CCATTGGGCATGGTCTGGATCTCAAAGATCTTGGCAATCTTGGGGTaGTCTTTGGCATGCCCATTCTTCTCTGGTTTGGCGGGGCTGTCG +
Preference number: 5 (lower is better)
Translates to: PLGMVWISKILAILG*SLACPFFSGLAGLS
Trigger: CGACAGCCCCGCCAAACCAGAGAAGAATGGGCATGCCAAAGACCACCCCAAGATTGCCAAGATCTTTGAGATCCAGACCATGCCCAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTTACATGGGTCTCCCAGGACTGTCCGGGTTTTGCCATaGGGCATGGTCTGGATCTCA +
Preference number: 5 (lower is better)
Translates to: GISGVQPAVWYLHGSPRTVRVLP*GMVWIS
Trigger: TGAGATCCAGACCATGCCCAATGGCAAAACCCGGAC...AGTCCTGGGAGACCCATGTAAATACCAGACTGCAGGTTGGACCCCAGAGATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp TGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTTACATGGGTCTCCGTCCGGGTTTTGCCATaGGGCATGGTCTGGATCTCA +
Preference number: 5 (lower is better)
Translates to: WLGNLWGPTCSLVFTWVSVRVLP*GMVWIS
Trigger: TGAGATCCAGACCATGCCCAATGGCAAAACCCGGAC...GGAGACCCATGTAAATACCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GCTAAGGTTTTTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTTACCTCGGCAAGAGAGCTaGCTTGCCTCCTGTGGGCCT +
Preference number: 5 (lower is better)
Translates to: AKVFGLGISGVQPAVWYLPRQES*LASCGP
Trigger: AGGCCCACAGGAGGCAAGCAAGCTCTCTTGCCGAGG...TAAATACCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GGGGTCCAACCTGCAGTCTGGTATTTACATGGGTCTCCCAGGACTGAAGTTGCCAGGGAGCTAAGGTTTTaGGCTTGGGAATCTCTGGGG +
Preference number: 5 (lower is better)
Translates to: GVQPAVWYLHGSPRTEVARELRF*AWESLG
Trigger: CCCCAGAGATTCCCAAGCCAAAAACCTTAGCTCCCT...GGCAACTTCAGTCCTGGGAGACCCATGTAAATACCAGACTGCAGGTTGGACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS CCA 90 bp CTCATGGTCTTGAGGGAGGTCCGGGTTTTGCCATTGGGCATGGTCTaGATCTCAAAGATCTTGGCAATCTTGGGGTGGTCTTTGGCATGC +
Preference number: 5 (lower is better)
Translates to: LMVLREVRVLPLGMV*ISKILAILGWSLAC
Trigger: GCATGCCAAAGACCACCCCAAGATTGCCAAGATCTTTGAGATCCAGACCATGCCCAATGGCAAAACCCGGACCTCCCTCAAGACCATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GGGAGGGAGCTAAGGTTTTTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGCTAAGGTTTTTGGCTaGGGAATCTCTGGGGTCCAA +
Preference number: 5 (lower is better)
Translates to: GRELRFLAWESLGSNLQSAKVFG*GISGVQ
Trigger: TTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAGC...AGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAGCTCCCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS CCA 90 bp TTTTGCCATTGGGCATGGTCTGGATCTCAAAGATCTTGGCAATCTTaGGGTGGTCTTTGGCATGCCCATTCTTCTCTGGTTTGGCGGGGC +
Preference number: 5 (lower is better)
Translates to: FCHWAWSGSQRSWQS*GGLWHAHSSLVWRG
Trigger: GCCCCGCCAAACCAGAGAAGAATGGGCATGCCAAAGACCACCCCAAGATTGCCAAGATCTTTGAGATCCAGACCATGCCCAATGGCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS CCA 90 bp GATCATCATCATACCAGGACAGATTCAGTGGATCCATCAGGGCGGTaGAGCCACTGGGTGGCCAGGCTCTTGCATATGAACGAACAAACA +
Preference number: 5 (lower is better)
Translates to: DHHHTRTDSVDPSGR*SHWVARLLHMNEQT
Trigger: TGTTTGTTCGTTCATATGCAAGAGCCTGGCCACCCAGTGGCTCCACCGCCCTGATGGATCCACTGAATCTGTCCTGGTATGATGATGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543292.1
CDS-3UTR CAA 90 bp GGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTTACATGGGTCTCCCAGGACTATCTTGGGGTGGTCTTaGGCATGCCCATTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: GISGVQPAVWYLHGSPRTILGWS*ACPFFS
Trigger: AGAGAAGAATGGGCATGCCAAAGACCACCCCAAGAT...AGTCCTGGGAGACCCATGTAAATACCAGACTGCAGGTTGGACCCCAGAGATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp TATTTACATGGGTCTCCCAGGACTGAAGTTGCCTGGCTCCTCGGCAAGAGAGCTAAGATCTTGGCAATCTaGGGGTGGTCTTTGGCATGC +
Preference number: 5 (lower is better)
Translates to: YLHGSPRTEVAWLLGKRAKILAI*GWSLAC
Trigger: GCATGCCAAAGACCACCCCAAGATTGCCAAGATCTT...AGCTCTCTTGCCGAGGAGCCAGGCAACTTCAGTCCTGGGAGACCCATGTAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GGGAGGGAGCTAAGGTTTTTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTTGGATCTCAAAGATCTaGGCAATCTTGGGGTGGTCT +
Preference number: 5 (lower is better)
Translates to: GRELRFLAWESLGSNLQSWISKI*AILGWS
Trigger: AGACCACCCCAAGATTGCCAAGATCTTTGAGATCCA...AGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAGCTCCCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GGACTGAAGTTGCCTGGCTCCTCGGCAAGAGAGCTTGCTTGCCTCCTGTGGGCCAATTTTCTAAAAATGTaGGGCCTTCTGCCACTCTTT +
Preference number: 5 (lower is better)
Translates to: GLKLPGSSARELACLLWANFLKM*GLLPLF
Trigger: AAAGAGTGGCAGAAGGCCCAACATTTTTAGAAAATT...GGCCCACAGGAGGCAAGCAAGCTCTCTTGCCGAGGAGCCAGGCAACTTCAGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542968.5
CDS CCA 90 bp AGGTCCGGGTTTTGCCATTGGGCATGGTCTGGATCTCAAAGATCTTaGCAATCTTGGGGTGGTCTTTGGCATGCCCATTCTTCTCTGGTT +
Preference number: 5 (lower is better)
Translates to: RSGFCHWAWSGSQRS*QSWGGLWHAHSSLV
Trigger: AACCAGAGAAGAATGGGCATGCCAAAGACCACCCCAAGATTGCCAAGATCTTTGAGATCCAGACCATGCCCAATGGCAAAACCCGGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp GAGCTAAGGTTTTTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTAGGACAGGCGGGATGTaGCAGTCACAGTGTATGTTC +
Preference number: 5 (lower is better)
Translates to: ELRFLAWESLGSNLQSGIRTGGM*QSQCMF
Trigger: GAACATACACTGTGACTGCAACATCCCGCCTGTCCT...AATACCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp TATTTACATGGGTCTCCCAGGACTGAAGTTGCCTGGCTCCTCGGCAAGAGAGCTATCTTCAGGAAGGCCTaGCGGAACTCAATGTTGAAG +
Preference number: 5 (lower is better)
Translates to: YLHGSPRTEVAWLLGKRAIFRKA*RNSMLK
Trigger: CTTCAACATTGAGTTCCGCAAGGCCTTCCTGAAGAT...AGCTCTCTTGCCGAGGAGCCAGGCAACTTCAGTCCTGGGAGACCCATGTAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS-3UTR CAA 90 bp AGGAAAGTGGTTTTGCGTCAGAGTGTGGCAGAGGCAGTCCCTCAAAGAACCTCTGCTAAGGTTTTTGGCTaGGGAATCTCTGGGGTCCAA +
Preference number: 5 (lower is better)
Translates to: RKVVLRQSVAEAVPQRTSAKVFG*GISGVQ
Trigger: TTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAGC...AGAGGTTCTTTGAGGGACTGCCTCTGCCACACTCTGACGCAAAACCACTTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000544518.5
CDS GCA 90 bp ATTACGTTGGTATGGCCAACCATTTTCTCGTACACATCCATGCCTTaGAGAACCGAGGTGTCTCACTTCATGCCTGCTTGGAGGTGTGCA +
Preference number: 5 (lower is better)
Translates to: ITLVWPTIFSYTSMP*RTEVSHFMPAWRCA
Trigger: TGCACACCTCCAAGCAGGCATGAAGTGAGACACCTCGGTTCTGCAAGGCATGGATGTGTACGAGAAAATGGTTGGCCATACCAACGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540600.5
CDS GCA 90 bp TCTGGCCAGGAAAAATGGACACAAGGTGTCAGTGAGAGGGCCTCTTaGAGAGGTCTCCAGGAAGAAGACCAACTCCTGGCATTTAATAAT +
Preference number: 5 (lower is better)
Translates to: SGQEKWTQGVSERAS*RGLQEEDQLLAFNN
Trigger: ATTATTAAATGCCAGGAGTTGGTCTTCTTCCTGGAGACCTCTGCAAGAGGCCCTCTCACTGACACCTTGTGTCCATTTTTCCTGGCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542968.5
CDS-3UTR CAA 90 bp GCTAAGGTTTTTGGCTTGGGAATCTCTGGGGTCCAACCTGCAGTCTGGTATTTATGGATCTCAAAGATCTaGGCAATCTTGGGGTGGTCT +
Preference number: 5 (lower is better)
Translates to: AKVFGLGISGVQPAVWYLWISKI*AILGWS
Trigger: AGACCACCCCAAGATTGCCAAGATCTTTGAGATCCA...TAAATACCAGACTGCAGGTTGGACCCCAGAGATTCCCAAGCCAAAAACCTTAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS GCA 90 bp TTTTTATTACGTTGGTATGGCCAACCATTTTCTCGTACACATCCATaGCTTGCAGAACCGAGGTGTCTCACTTCATGCCTGCTTGGAGGT +
Preference number: 5 (lower is better)
Translates to: FLLRWYGQPFSRTHP*LAEPRCLTSCLLGG
Trigger: ACCTCCAAGCAGGCATGAAGTGAGACACCTCGGTTCTGCAAGGCATGGATGTGTACGAGAAAATGGTTGGCCATACCAACGTAATAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540600.5
CDS CCA 90 bp GTGAGAGGGCCTCTTGCAGAGGTCTCCAGGAAGAAGACCAACTCCTaGCATTTAATAATGAGAATTTTCCAACTCGGGATTTTAAGGTTT +
Preference number: 5 (lower is better)
Translates to: VRGPLAEVSRKKTNS*HLIMRIFQLGILRF
Trigger: AAACCTTAAAATCCCGAGTTGGAAAATTCTCATTATTAAATGCCAGGAGTTGGTCTTCTTCCTGGAGACCTCTGCAAGAGGCCCTCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542968.5
CDS CAA 72 bp CATAGGGCGCCCGGGGGCAGAGACGGCGCCGGCTGCTaGAGGCTTCCAGCTCCCGCCGCATCCACGCGCGGC +
Preference number: 6 (lower is better)
Translates to: HRAPGGRDGAGC*RLPAPAASTRG
Trigger: GCCGCGCGTGGATGCGGCGGGAGCTGGAAGCCTCAAGCAGCCGGCGCCGTCTCTGCCCCCGGGCGCCCTATG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000362072.8
ENST00000542616.1
CDS CAA 90 bp TCTTCAAGCCATAGGGCGCCCGGGGGCAGAGACGGCGCCGGCTGCTaGAGGCTTCCAGCTCCCGCCGCATCCACGCGCGGCCGCCCCTCC +
Preference number: 6 (lower is better)
Translates to: SSSHRAPGGRDGAGC*RLPAPAASTRGRPS
Trigger: GGAGGGGCGGCCGCGCGTGGATGCGGCGGGAGCTGGAAGCCTCAAGCAGCCGGCGCCGTCTCTGCCCCCGGGCGCCCTATGGCTTGAAGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000362072.8
CDS CAA 90 bp ACTTCAAGCCATAGGGCGCCCGGGGGCAGAGACGGCGCCGGCTGCTaGAGGCTTCCAGCTCCCGCCGCATCCACGCGCGGCCGCCCCTCC +
Preference number: 6 (lower is better)
Translates to: TSSHRAPGGRDGAGC*RLPAPAASTRGRPS
Trigger: GGAGGGGCGGCCGCGCGTGGATGCGGCGGGAGCTGGAAGCCTCAAGCAGCCGGCGCCGTCTCTGCCCCCGGGCGCCCTATGGCTTGAAGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542616.1
CDS CCA 72 bp TTGGCGGGGCTGTCGGGAGTGCTGTGGAGACCATGGTaGGACGGGTCGGGGAGAGTCAGCTGGTGGTGGCTG +
Preference number: 6 (lower is better)
Translates to: LAGLSGVLWRPW*DGSGRVSWWWL
Trigger: CAGCCACCACCAGCTGACTCTCCCCGACCCGTCCCACCATGGTCTCCACAGCACTCCCGACAGCCCCGCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS GCA 72 bp GCCCATTCTTCTCTGGTTTGGCGGGGCTGTCGGGAGTaGTGTGGAGACCATGGTGGGACGGGTCGGGGAGAG +
Preference number: 6 (lower is better)
Translates to: AHSSLVWRGCRE*CGDHGGTGRGE
Trigger: CTCTCCCCGACCCGTCCCACCATGGTCTCCACAGCACTCCCGACAGCCCCGCCAAACCAGAGAAGAATGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS CAA 72 bp GCCCTCAGGTGGGCCCTGAAAGCTCGGCTGCTGCGTTaGGTGTTGACTCGCTTGCGGCGTCTGCGGAGGACA +
Preference number: 6 (lower is better)
Translates to: ALRWALKARLLR*VLTRLRRLRRT
Trigger: TGTCCTCCGCAGACGCCGCAAGCGAGTCAACACCAAACGCAGCAGCCGAGCTTTCAGGGCCCACCTGAGGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000535984.1
ENST00000538967.5
ENST00000539420.1
ENST00000540600.5
ENST00000542968.5
ENST00000544518.5
CDS CCA 72 bp CATACCAGGACAGATTCAGTGGATCCATCAGGGCGGTaGAGCCACTGGGTGGCCAGGCTCGTCTGCTCGCCA +
Preference number: 6 (lower is better)
Translates to: HTRTDSVDPSGR*SHWVARLVCSP
Trigger: TGGCGAGCAGACGAGCCTGGCCACCCAGTGGCTCCACCGCCCTGATGGATCCACTGAATCTGTCCTGGTATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540600.5
CDS TCA 72 bp TGTAGTGGGGTCTGTCCGCCTTCCCGTCTGACCCGTTaGAGGGCCGGCTCCAGTTCTGCCTCTCCAGATCAT +
Preference number: 6 (lower is better)
Translates to: CSGVCPPSRLTR*RAGSSSASPDH
Trigger: ATGATCTGGAGAGGCAGAACTGGAGCCGGCCCTTCAACGGGTCAGACGGGAAGGCGGACAGACCCCACTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000540600.5
ENST00000542968.5
ENST00000543292.1
ENST00000544518.5
CDS CAA 90 bp TTGGCAATCTTGGGGTGGTCTTTGGCATGCCCATTCTTCTCTGGTTaGGCGGGGCTGTCGGGAGTGCTGTGGAGACCATGGTGGGACGGG +
Preference number: 6 (lower is better)
Translates to: LAILGWSLACPFFSG*AGLSGVLWRPWWDG
Trigger: CCCGTCCCACCATGGTCTCCACAGCACTCCCGACAGCCCCGCCAAACCAGAGAAGAATGGGCATGCCAAAGACCACCCCAAGATTGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS TCA 72 bp ATAGTAGTTGTAGTGGGGTCTGTCCGCCTTCCCGTCTaGCCCGTTGAAGGGCCGGCTCCAGTTCTGCCTCTC +
Preference number: 6 (lower is better)
Translates to: IVVVVGSVRLPV*PVEGPAPVLPL
Trigger: GAGAGGCAGAACTGGAGCCGGCCCTTCAACGGGTCAGACGGGAAGGCGGACAGACCCCACTACAACTACTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000540600.5
ENST00000542968.5
ENST00000543292.1
ENST00000544518.5
CDS TCA 72 bp CTAGGGGCAGAAAGACCTGGCTCTGGGTCCCTGGCCTaGGCACTTACCACTCTCCGCCTGTTCACTGGGAAA +
Preference number: 6 (lower is better)
Translates to: LGAERPGSGSLA*ALTTLRLFTGK
Trigger: TTTCCCAGTGAACAGGCGGAGAGTGGTAAGTGCTCAGGCCAGGGACCCAGAGCCAGGTCTTTCTGCCCCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540600.5
CDS CCA 72 bp TGGGGTGGTCTTTGGCATGCCCATTCTTCTCTGGTTTaGCGGGGCTGTCGGGAGTGCTGTGGAGACCATGGT +
Preference number: 6 (lower is better)
Translates to: WGGLWHAHSSLV*RGCRECCGDHG
Trigger: ACCATGGTCTCCACAGCACTCCCGACAGCCCCGCCAAACCAGAGAAGAATGGGCATGCCAAAGACCACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS CCA 72 bp CATACCAGGACAGATTCAGTGGATCCATCAGGGCGGTaGAGCCACTGGGTGGCCAGGCTCTGGCCAGGAAAA +
Preference number: 6 (lower is better)
Translates to: HTRTDSVDPSGR*SHWVARLWPGK
Trigger: TTTTCCTGGCCAGAGCCTGGCCACCCAGTGGCTCCACCGCCCTGATGGATCCACTGAATCTGTCCTGGTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542968.5
CDS CAA 72 bp TTGGGGTGGTCTTTGGCATGCCCATTCTTCTCTGGTTaGGCGGGGCTGTCGGGAGTGCTGTGGAGACCATGG +
Preference number: 6 (lower is better)
Translates to: LGWSLACPFFSG*AGLSGVLWRPW
Trigger: CCATGGTCTCCACAGCACTCCCGACAGCCCCGCCAAACCAGAGAAGAATGGGCATGCCAAAGACCACCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS CAA 90 bp CACATCCATGCCTTGCAGAACCGAGGTGTCTCACTTCATGCCTGCTaGGAGGTGTGCACGGTGAGTCTGCCTTCAGCTGAGGCAAGGTGG +
Preference number: 6 (lower is better)
Translates to: HIHALQNRGVSLHAC*EVCTVSLPSAEARW
Trigger: CCACCTTGCCTCAGCTGAAGGCAGACTCACCGTGCACACCTCCAAGCAGGCATGAAGTGAGACACCTCGGTTCTGCAAGGCATGGATGTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540600.5
CDS TCA 72 bp CCTTCTGCTGGGAGAGCTTCCTACGGCTCATGGTCTTaGGGGAGGTCCGGGTTTTGCCATTGGGCATGGTCT +
Preference number: 6 (lower is better)
Translates to: PSAGRASYGSWS*GRSGFCHWAWS
Trigger: AGACCATGCCCAATGGCAAAACCCGGACCTCCCTCAAGACCATGAGCCGTAGGAAGCTCTCCCAGCAGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS GCA 72 bp AACCGAGGTGTCTCACTTCATGCCTGCTTGGAGGTGTaGACGGTGAGTCTGCCTTCAGCTGAGGCAAGGTGG +
Preference number: 6 (lower is better)
Translates to: NRGVSLHACLEV*TVSLPSAEARW
Trigger: CCACCTTGCCTCAGCTGAAGGCAGACTCACCGTGCACACCTCCAAGCAGGCATGAAGTGAGACACCTCGGTT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540600.5
CDS GCA 72 bp CCGCCTCAGACAGGGATAGGGAAGCGCTCTGTCTGGTaGTTAGAGGTGTCTCTTGTCTCCGCATACCACCCT +
Preference number: 6 (lower is better)
Translates to: PPQTGIGKRSVW*LEVSLVSAYHP
Trigger: AGGGTGGTATGCGGAGACAAGAGACACCTCTAAGCACCAGACAGAGCGCTTCCCTATCCCTGTCTGAGGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542616.1
CDS CCA 72 bp AATCTTGGGGTGGTCTTTGGCATGCCCATTCTTCTCTaGTTTGGCGGGGCTGTCGGGAGTGCTGTGGAGACC +
Preference number: 6 (lower is better)
Translates to: NLGVVFGMPILL*FGGAVGSAVET
Trigger: GGTCTCCACAGCACTCCCGACAGCCCCGCCAAACCAGAGAAGAATGGGCATGCCAAAGACCACCCCAAGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS CCA 72 bp GGCTCGCCGGGCAGCCTCCACTCTCCGCCTGTTCACTaGGAAACTCCCATTAGACTTCATGATAACGGTGCA +
Preference number: 6 (lower is better)
Translates to: GSPGSLHSPPVH*ETPIRLHDNGA
Trigger: TGCACCGTTATCATGAAGTCTAATGGGAGTTTCCCAGTGAACAGGCGGAGAGTGGAGGCTGCCCGGCGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362072.8
ENST00000542968.5
ENST00000544518.5
CDS CCA 72 bp TTCTCCCATTGGCCAGCTTCTGAGGTCTCAGAACCATaGCCAGTGGGCTTCCCTAGGGGCAGAAAGACCTGG +
Preference number: 6 (lower is better)
Translates to: FSHWPASEVSEP*PVGFPRGRKTW
Trigger: CCAGGTCTTTCTGCCCCTAGGGAAGCCCACTGGCCATGGTTCTGAGACCTCAGAAGCTGGCCAATGGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540600.5
CDS CCA 72 bp TGCCCGCCTCAGACAGGGATAGGGAAGCGCTCTGTCTaGTGCTTAGAGGTGTCTCTTGTCTCCGCATACCAC +
Preference number: 6 (lower is better)
Translates to: CPPQTGIGKRSV*CLEVSLVSAYH
Trigger: GTGGTATGCGGAGACAAGAGACACCTCTAAGCACCAGACAGAGCGCTTCCCTATCCCTGTCTGAGGCGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542616.1
CDS CAA 72 bp TCCTTCTGCTGGGAGAGCTTCCTACGGCTCATGGTCTaGAGGGAGGTCCGGGTTTTGCCATTGGGCATGGTC +
Preference number: 6 (lower is better)
Translates to: SFCWESFLRLMV*REVRVLPLGMV
Trigger: GACCATGCCCAATGGCAAAACCCGGACCTCCCTCAAGACCATGAGCCGTAGGAAGCTCTCCCAGCAGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS CAA 72 bp GCCTTGCAGAACCGAGGTGTCTCACTTCATGCCTGCTaGGAGGTGTGCACGGTGAGTCTGCCTTCAGCTGAG +
Preference number: 6 (lower is better)
Translates to: ALQNRGVSLHAC*EVCTVSLPSAE
Trigger: CTCAGCTGAAGGCAGACTCACCGTGCACACCTCCAAGCAGGCATGAAGTGAGACACCTCGGTTCTGCAAGGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540600.5
CDS TCA 72 bp CGATGGAGGAGTAGACCACGAAGGCCGGGTTGGCAATaGTGCACTCGTTCTGGTCTGTCGATGCTGATGGCA +
Preference number: 6 (lower is better)
Translates to: RWRSRPRRPGWQ*CTRSGLSMLMA
Trigger: TGCCATCAGCATCGACAGACCAGAACGAGTGCATCATTGCCAACCCGGCCTTCGTGGTCTACTCCTCCATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535984.1
CDS GCA 72 bp CATGCCTTGCAGAACCGAGGTGTCTCACTTCATGCCTaGTTGGAGGTGTGCACGGTGAGTCTGCCTTCAGCT +
Preference number: 6 (lower is better)
Translates to: HALQNRGVSLHA*LEVCTVSLPSA
Trigger: AGCTGAAGGCAGACTCACCGTGCACACCTCCAAGCAGGCATGAAGTGAGACACCTCGGTTCTGCAAGGCATG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540600.5
CDS CCA 72 bp CCTCTCCAGATCATCATCATACCAGGACAGATTCAGTaGATCCATCAGGGCGGTGGAGCCACTGGGTGGCCA +
Preference number: 6 (lower is better)
Translates to: PLQIIIIPGQIQ*IHQGGGATGWP
Trigger: TGGCCACCCAGTGGCTCCACCGCCCTGATGGATCCACTGAATCTGTCCTGGTATGATGATGATCTGGAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000540600.5
ENST00000542968.5
ENST00000543292.1
ENST00000544518.5
CDS CCA 72 bp CCGGGCAGCCTCCTGCACCACTCTCCGCCTGTTCACTaGGAAACTCCCATTAGACTTCATGATAACGGTGCA +
Preference number: 6 (lower is better)
Translates to: PGSLLHHSPPVH*ETPIRLHDNGA
Trigger: TGCACCGTTATCATGAAGTCTAATGGGAGTTTCCCAGTGAACAGGCGGAGAGTGGTGCAGGAGGCTGCCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538967.5
CDS CCA 72 bp CATACCAGGACAGATTCAGTGGATCCATCAGGGCGGTaGAGCCACTGGGTGGCCAGGCTCTTGCATATGAAC +
Preference number: 6 (lower is better)
Translates to: HTRTDSVDPSGR*SHWVARLLHMN
Trigger: GTTCATATGCAAGAGCCTGGCCACCCAGTGGCTCCACCGCCCTGATGGATCCACTGAATCTGTCCTGGTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543292.1
CDS CAA 90 bp GGCATGGTCTGGATCTCAAAGATCTTGGCAATCTTGGGGTGGTCTTaGGCATGCCCATTCTTCTCTGGTTTGGCGGGGCTGTCGGGAGTG +
Preference number: 6 (lower is better)
Translates to: GMVWISKILAILGWS*ACPFFSGLAGLSGV
Trigger: CACTCCCGACAGCCCCGCCAAACCAGAGAAGAATGGGCATGCCAAAGACCACCCCAAGATTGCCAAGATCTTTGAGATCCAGACCATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS CAA 90 bp GCTTTCTTCTCCTTCTGCTGGGAGAGCTTCCTACGGCTCATGGTCTaGAGGGAGGTCCGGGTTTTGCCATTGGGCATGGTCTGGATCTCA +
Preference number: 6 (lower is better)
Translates to: AFFSFCWESFLRLMV*REVRVLPLGMVWIS
Trigger: TGAGATCCAGACCATGCCCAATGGCAAAACCCGGACCTCCCTCAAGACCATGAGCCGTAGGAAGCTCTCCCAGCAGAAGGAGAAGAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS GCA 72 bp TTCCCGTCTGACCCGTTGAAGGGCCGGCTCCAGTTCTaGCTCTCCAGATCATCATCATACCAGGACAGATTC +
Preference number: 6 (lower is better)
Translates to: FPSDPLKGRLQF*LSRSSSYQDRF
Trigger: GAATCTGTCCTGGTATGATGATGATCTGGAGAGGCAGAACTGGAGCCGGCCCTTCAACGGGTCAGACGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000540600.5
ENST00000542968.5
ENST00000543292.1
ENST00000544518.5
CDS TCA 72 bp AGGCTCTGGCCAGGAAAAATGGACACAAGGTGTCAGTaGGAGGGCCTCTTGCAGAGGTCTCCAGGAAGAAGA +
Preference number: 6 (lower is better)
Translates to: RLWPGKMDTRCQ*EGLLQRSPGRR
Trigger: TCTTCTTCCTGGAGACCTCTGCAAGAGGCCCTCTCACTGACACCTTGTGTCCATTTTTCCTGGCCAGAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542968.5
CDS GCA 72 bp TCAAAGATCTTGGCAATCTTGGGGTGGTCTTTGGCATaGCCATTCTTCTCTGGTTTGGCGGGGCTGTCGGGA +
Preference number: 6 (lower is better)
Translates to: SKILAILGWSLA*PFFSGLAGLSG
Trigger: TCCCGACAGCCCCGCCAAACCAGAGAAGAATGGGCATGCCAAAGACCACCCCAAGATTGCCAAGATCTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS CAA 72 bp AGCCACGTGAAGGCGCTGTACAGGACAGGCGGGATGTaGCAGTCACAGTGTATGTTCAGGATGTGTGTGATG +
Preference number: 6 (lower is better)
Translates to: SHVKALYRTGGM*QSQCMFRMCVM
Trigger: CATCACACACATCCTGAACATACACTGTGACTGCAACATCCCGCCTGTCCTGTACAGCGCCTTCACGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS CAA 72 bp AGGCTCTTGCATATGAACGAACAAACACACACGGGTTaGGTGGGCAACAGAGAAGGCAGGCGGAACTCTGGG +
Preference number: 6 (lower is better)
Translates to: RLLHMNEQTHTG*VGNREGRRNSG
Trigger: CCCAGAGTTCCGCCTGCCTTCTCTGTTGCCCACCAAACCCGTGTGTGTTTGTTCGTTCATATGCAAGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543292.1
CDS CAA 90 bp TGGGAGAGCTTCCTACGGCTCATGGTCTTGAGGGAGGTCCGGGTTTaGCCATTGGGCATGGTCTGGATCTCAAAGATCTTGGCAATCTTG +
Preference number: 6 (lower is better)
Translates to: WESFLRLMVLREVRV*PLGMVWISKILAIL
Trigger: CAAGATTGCCAAGATCTTTGAGATCCAGACCATGCCCAATGGCAAAACCCGGACCTCCCTCAAGACCATGAGCCGTAGGAAGCTCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS TCA 72 bp TTCATGATAACGGTGCAGAGTTTCATGTCCTCGGGGTaGGTACAGTTGCCCTTTAGTGGAGCCCTCAGGTGG +
Preference number: 6 (lower is better)
Translates to: FMITVQSFMSSG*VQLPFSGALRW
Trigger: CCACCTGAGGGCTCCACTAAAGGGCAACTGTACTCACCCCGAGGACATGAAACTCTGCACCGTTATCATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000362072.8
ENST00000535984.1
ENST00000538967.5
ENST00000540600.5
ENST00000542968.5
ENST00000544518.5
CDS CCA 72 bp GGATCTCAAAGATCTTGGCAATCTTGGGGTGGTCTTTaGCATGCCCATTCTTCTCTGGTTTGGCGGGGCTGT +
Preference number: 6 (lower is better)
Translates to: GSQRSWQSWGGL*HAHSSLVWRGC
Trigger: ACAGCCCCGCCAAACCAGAGAAGAATGGGCATGCCAAAGACCACCCCAAGATTGCCAAGATCTTTGAGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS CCA 72 bp TTGAGGGAGGTCCGGGTTTTGCCATTGGGCATGGTCTaGATCTCAAAGATCTTGGCAATCTTGGGGTGGTCT +
Preference number: 6 (lower is better)
Translates to: LREVRVLPLGMV*ISKILAILGWS
Trigger: AGACCACCCCAAGATTGCCAAGATCTTTGAGATCCAGACCATGCCCAATGGCAAAACCCGGACCTCCCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS CCA 72 bp CCTGGCCTGAGCACTTACCACTCTCCGCCTGTTCACTaGGAAACTCCCATTAGACTTCATGATAACGGTGCA +
Preference number: 6 (lower is better)
Translates to: PGLSTYHSPPVH*ETPIRLHDNGA
Trigger: TGCACCGTTATCATGAAGTCTAATGGGAGTTTCCCAGTGAACAGGCGGAGAGTGGTAAGTGCTCAGGCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540600.5
CDS CAA 72 bp TGGATCTCAAAGATCTTGGCAATCTTGGGGTGGTCTTaGGCATGCCCATTCTTCTCTGGTTTGGCGGGGCTG +
Preference number: 6 (lower is better)
Translates to: WISKILAILGWS*ACPFFSGLAGL
Trigger: CAGCCCCGCCAAACCAGAGAAGAATGGGCATGCCAAAGACCACCCCAAGATTGCCAAGATCTTTGAGATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS CAA 72 bp TTCCTACGGCTCATGGTCTTGAGGGAGGTCCGGGTTTaGCCATTGGGCATGGTCTGGATCTCAAAGATCTTG +
Preference number: 6 (lower is better)
Translates to: FLRLMVLREVRV*PLGMVWISKIL
Trigger: CAAGATCTTTGAGATCCAGACCATGCCCAATGGCAAAACCCGGACCTCCCTCAAGACCATGAGCCGTAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS CAA 90 bp GTTTTGCCATTGGGCATGGTCTGGATCTCAAAGATCTTGGCAATCTaGGGGTGGTCTTTGGCATGCCCATTCTTCTCTGGTTTGGCGGGG +
Preference number: 6 (lower is better)
Translates to: VLPLGMVWISKILAI*GWSLACPFFSGLAG
Trigger: CCCCGCCAAACCAGAGAAGAATGGGCATGCCAAAGACCACCCCAAGATTGCCAAGATCTTTGAGATCCAGACCATGCCCAATGGCAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS CAA 90 bp GAGGTCCGGGTTTTGCCATTGGGCATGGTCTGGATCTCAAAGATCTaGGCAATCTTGGGGTGGTCTTTGGCATGCCCATTCTTCTCTGGT +
Preference number: 6 (lower is better)
Translates to: EVRVLPLGMVWISKI*AILGWSLACPFFSG
Trigger: ACCAGAGAAGAATGGGCATGCCAAAGACCACCCCAAGATTGCCAAGATCTTTGAGATCCAGACCATGCCCAATGGCAAAACCCGGACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS GCA 72 bp CGTTGGTATGGCCAACCATTTTCTCGTACACATCCATaGCTTGCAGAACCGAGGTGTCTCACTTCATGCCTG +
Preference number: 6 (lower is better)
Translates to: RWYGQPFSRTHP*LAEPRCLTSCL
Trigger: CAGGCATGAAGTGAGACACCTCGGTTCTGCAAGGCATGGATGTGTACGAGAAAATGGTTGGCCATACCAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540600.5
CDS CAA 72 bp GGTATGGCCAACCATTTTCTCGTACACATCCATGCCTaGCAGAACCGAGGTGTCTCACTTCATGCCTGCTTG +
Preference number: 6 (lower is better)
Translates to: GMANHFLVHIHA*QNRGVSLHACL
Trigger: CAAGCAGGCATGAAGTGAGACACCTCGGTTCTGCAAGGCATGGATGTGTACGAGAAAATGGTTGGCCATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540600.5
CDS CAA 90 bp TATTACGTTGGTATGGCCAACCATTTTCTCGTACACATCCATGCCTaGCAGAACCGAGGTGTCTCACTTCATGCCTGCTTGGAGGTGTGC +
Preference number: 6 (lower is better)
Translates to: YYVGMANHFLVHIHA*QNRGVSLHACLEVC
Trigger: GCACACCTCCAAGCAGGCATGAAGTGAGACACCTCGGTTCTGCAAGGCATGGATGTGTACGAGAAAATGGTTGGCCATACCAACGTAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540600.5
CDS CCA 72 bp ATGGTCTGGATCTCAAAGATCTTGGCAATCTTGGGGTaGTCTTTGGCATGCCCATTCTTCTCTGGTTTGGCG +
Preference number: 6 (lower is better)
Translates to: MVWISKILAILG*SLACPFFSGLA
Trigger: CGCCAAACCAGAGAAGAATGGGCATGCCAAAGACCACCCCAAGATTGCCAAGATCTTTGAGATCCAGACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS CCA 72 bp TGGGCATGGTCTGGATCTCAAAGATCTTGGCAATCTTaGGGTGGTCTTTGGCATGCCCATTCTTCTCTGGTT +
Preference number: 6 (lower is better)
Translates to: WAWSGSQRSWQS*GGLWHAHSSLV
Trigger: AACCAGAGAAGAATGGGCATGCCAAAGACCACCCCAAGATTGCCAAGATCTTTGAGATCCAGACCATGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS CAA 72 bp TTGGGCATGGTCTGGATCTCAAAGATCTTGGCAATCTaGGGGTGGTCTTTGGCATGCCCATTCTTCTCTGGT +
Preference number: 6 (lower is better)
Translates to: LGMVWISKILAI*GWSLACPFFSG
Trigger: ACCAGAGAAGAATGGGCATGCCAAAGACCACCCCAAGATTGCCAAGATCTTTGAGATCCAGACCATGCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS CAA 72 bp GTTTTGCCATTGGGCATGGTCTGGATCTCAAAGATCTaGGCAATCTTGGGGTGGTCTTTGGCATGCCCATTC +
Preference number: 6 (lower is better)
Translates to: VLPLGMVWISKI*AILGWSLACPF
Trigger: GAATGGGCATGCCAAAGACCACCCCAAGATTGCCAAGATCTTTGAGATCCAGACCATGCCCAATGGCAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS CCA 72 bp TTTTGCCATTGGGCATGGTCTGGATCTCAAAGATCTTaGCAATCTTGGGGTGGTCTTTGGCATGCCCATTCT +
Preference number: 6 (lower is better)
Translates to: FCHWAWSGSQRS*QSWGGLWHAHS
Trigger: AGAATGGGCATGCCAAAGACCACCCCAAGATTGCCAAGATCTTTGAGATCCAGACCATGCCCAATGGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346454.7
ENST00000362072.8
ENST00000538967.5
ENST00000542968.5
ENST00000544518.5
CDS CCA 72 bp ATAAGGCAGCTCATGTCAGTGGAAAGAACACAGGTGTaGATTTCAGAGTCACACAGGTCTGGGCTTAGTGTC +
Preference number: 6 (lower is better)
Translates to: IRQLMSVERTQV*ISESHRSGLSV
Trigger: GACACTAAGCCCAGACCTGTGTGACTCTGAAATCCACACCTGTGTTCTTTCCACTGACATGAGCTGCCTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540600.5