RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DRC7 (Homo sapiens)

Ensembl gene IDs: ENSG00000159625

Ensembl transcript IDs: ENST00000336825.12, ENST00000360716.8, ENST00000394337.8, ENST00000562250.1, ENST00000563126.5, ENST00000564132.1, ENST00000564297.5, ENST00000565609.1, ENST00000569167.1, ENST00000569375.5

Found 618 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCATGGAGCAGAGCAGCGTACTGAAGTCAAAGCAGTTCCCCTTCTaGTACTTGAGCACAGTGGTCGAGGAGTACAGGTGCGAGGGCGGC +
Preference number: 1 (lower is better)
Translates to: SMEQSSVLKSKQFPF*YLSTVVEEYRCEGG
Trigger: GCCGCCCTCGCACCTGTACTCCTCGACCACTGTGCTCAAGTACCAGAAGGGGAACTGCTTTGACTTCAGTACGCTGCTCTGCTCCATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564297.5
3UTR TCA 90 bp TTTGCAGATGGCTGTGGGACCATCTGCAGAGGTGCTGTGAAGACCTaGCATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAA +
Preference number: 1 (lower is better)
Translates to: FADGCGTICRGAVKT*HSNGEKDRKQTTGQ
Trigger: TTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGTCAGGTCTTCACAGCACCTCTGCAGATGGTCCCACAGCCATCTGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
3UTR TCA 90 bp ACCAGTTGTTTGCAGATGGCTGTGGGACCATCTGCAGAGGTGCTGTaGAGACCTGACATTCCAACGGAGAGAAGGACAGGAAGCAAACGA +
Preference number: 1 (lower is better)
Translates to: TSCLQMAVGPSAEVL*RPDIPTERRTGSKR
Trigger: TCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGTCAGGTCTTCACAGCACCTCTGCAGATGGTCCCACAGCCATCTGCAAACAACTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
3UTR TCA 90 bp GGCACAAATGGCAAATTAAGAGTGTGTTTATTTACAGGAAAATCATaGGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCAG +
Preference number: 1 (lower is better)
Translates to: GTNGKLRVCLFTGKS*EAGTNRAVGEVGWQ
Trigger: CTGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCTGTAAATAAACACACTCTTAATTTGCCATTTGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
3UTR-3UTR CCA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGTTTCTCTGGCAGCTCTaGCTGAGGCCCCAGGAGGGA +
Preference number: 2 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGFLWQL*LRPQEG
Trigger: TCCCTCCTGGGGCCTCAGCCAGAGCTGCCAGAGAAA...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
3UTR-3UTR CCA 90 bp GGTGGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGATTTCTCTGGCAGCTCTaGCTGAGGCCCCAGGAGGGA +
Preference number: 2 (lower is better)
Translates to: GGLAVRPGVCVNRHWLDRFLWQL*LRPQEG
Trigger: TCCCTCCTGGGGCCTCAGCCAGAGCTGCCAGAGAAA...TCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
3UTR-3UTR CCA 90 bp GTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGTTTCTCTGGCAGCTCTaGCTGAGGCCCCAGGAGGGA +
Preference number: 2 (lower is better)
Translates to: VCVNRHWLDRGNTGARLRFLWQL*LRPQEG
Trigger: TCCCTCCTGGGGCCTCAGCCAGAGCTGCCAGAGAAA...CCGCAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
3UTR-3UTR CCA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGGAGGTTTCCTTTCTCTaGCAGCTCTGGCTGAGGCCC +
Preference number: 2 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGEVSFL*QLWLRP
Trigger: GGGCCTCAGCCAGAGCTGCCAGAGAAAGGAAACCTC...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
3UTR-3UTR CCA 90 bp TGCATCTTAGCCTTCCCCATCCCACTTGGTGAGGTGGGCCACCCTAGTCACATTTTTCTCTGGCAGCTCTaGCTGAGGCCCCAGGAGGGA +
Preference number: 2 (lower is better)
Translates to: CILAFPIPLGEVGHPSHIFLWQL*LRPQEG
Trigger: TCCCTCCTGGGGCCTCAGCCAGAGCTGCCAGAGAAA...AATGTGACTAGGGTGGCCCACCTCACCAAGTGGGATGGGGAAGGCTAAGATGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
3UTR CAA 90 bp GAGCAGAGCAGCGTACTGAAGTCAAAGCAGTTCCCCTTCTGGTACTaGAGCACAGTGGTCGAGGAGTACAGGTGCGAGGGCGGCTTGAGA +
Preference number: 2 (lower is better)
Translates to: EQSSVLKSKQFPFWY*STVVEEYRCEGGLR
Trigger: TCTCAAGCCGCCCTCGCACCTGTACTCCTCGACCACTGTGCTCAAGTACCAGAAGGGGAACTGCTTTGACTTCAGTACGCTGCTCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564297.5
3UTR-3UTR CCA 90 bp AGCTGGGATTCAGTCCTCAAATTCTGGGGCATGCATCTTAGCCTTCCCCATCCCAGGGGAGGAAGGGGGTaGTCCCAGGCTATAGATAAC +
Preference number: 2 (lower is better)
Translates to: SWDSVLKFWGMHLSLPHPRGGRG*SQAIDN
Trigger: GTTATCTATAGCCTGGGACCACCCCCTTCCTCCCCT...GGGATGGGGAAGGCTAAGATGCATGCCCCAGAATTTGAGGACTGAATCCCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
3UTR-3UTR CCA 90 bp TGCATCTTAGCCTTCCCCATCCCACTTGGTGAGGTGGGCCACCCTAGTCACATTCCAGTTGTTTGCAGATaGCTGTGGGACCATCTGCAG +
Preference number: 2 (lower is better)
Translates to: CILAFPIPLGEVGHPSHIPVVCR*LWDHLQ
Trigger: CTGCAGATGGTCCCACAGCCATCTGCAAACAACTGG...AATGTGACTAGGGTGGCCCACCTCACCAAGTGGGATGGGGAAGGCTAAGATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
3UTR-3UTR CCA 90 bp CCCATTCCACAGATGGGTAAGTGGTATCTGGTAAGAGGAGGAGCTGGGATTCAGGTTTGCAGATGGCTGTaGGACCATCTGCAGAGGTGC +
Preference number: 2 (lower is better)
Translates to: PIPQMGKWYLVRGGAGIQVCRWL*DHLQRC
Trigger: GCACCTCTGCAGATGGTCCCACAGCCATCTGCAAAC...CTGAATCCCAGCTCCTCCTCTTACCAGATACCACTTACCCATCTGTGGAATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
3UTR CAA 90 bp CACTTGGTGAGGTGGGCCACCCTAGTCACATTGAGATATAACCAGTaGTTTGCAGATGGCTGTGGGACCATCTGCAGAGGTGCTGTGAAG +
Preference number: 2 (lower is better)
Translates to: HLVRWATLVTLRYNQ*FADGCGTICRGAVK
Trigger: CTTCACAGCACCTCTGCAGATGGTCCCACAGCCATCTGCAAACAACTGGTTATATCTCAATGTGACTAGGGTGGCCCACCTCACCAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
3UTR-3UTR CCA 90 bp CTGACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGAGGATGTGTAAACAGGCATTaGCTGGATAGAGGGAACACA +
Preference number: 2 (lower is better)
Translates to: LTFQRREGQEANDRPRGGCVNRH*LDRGNT
Trigger: TGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACA...TCCTCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
3UTR-3UTR CCA 90 bp ACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGAGGAAGGTGTGTAAACAGGCATTaGCTGGATAGAGGGAACACA +
Preference number: 2 (lower is better)
Translates to: TFQRREGQEANDRPRGGRCVNRH*LDRGNT
Trigger: TGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACA...CCTTCCTCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
3UTR-3UTR TCA 90 bp CATAAGTCTTATTTAATGCAACAATGCTACCCCATTCCACAGATGGGTAAGTGGTGCTGCTGGAGCTTGTaGAGCGCAAGGCACAAATGG +
Preference number: 2 (lower is better)
Translates to: HKSYLMQQCYPIPQMGKWCCWSL*SARHKW
Trigger: CCATTTGTGCCTTGCGCTTCACAAGCTCCAGCAGCA...CCACTTACCCATCTGTGGAATGGGGTAGCATTGTTGCATTAAATAAGACTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
3UTR-3UTR TCA 90 bp CATAAGTCTTATTTAATGCAACAATGCTACCCCATTCCACAGATGGGTAAGTGGTCTGCAGAGGTGCTGTaGAGACCTGACATTCCAACG +
Preference number: 2 (lower is better)
Translates to: HKSYLMQQCYPIPQMGKWSAEVL*RPDIPT
Trigger: CGTTGGAATGTCAGGTCTTCACAGCACCTCTGCAGA...CCACTTACCCATCTGTGGAATGGGGTAGCATTGTTGCATTAAATAAGACTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
3UTR-3UTR TCA 90 bp CATAAGTCTTATTTAATGCAACAATGCTACCCCATTCCACAGATGGGTAAGTGGTTTACAGGAAAATCATaGGAAGCAGGAACAAACAGG +
Preference number: 2 (lower is better)
Translates to: HKSYLMQQCYPIPQMGKWFTGKS*EAGTNR
Trigger: CCTGTTTGTTCCTGCTTCTCATGATTTTCCTGTAAA...CCACTTACCCATCTGTGGAATGGGGTAGCATTGTTGCATTAAATAAGACTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
3UTR TCA 72 bp TTGCAGATGGCTGTGGGACCATCTGCAGAGGTGCTGTaGAGACCTGACATTCCAACGGAGAGAAGGACAGGA +
Preference number: 3 (lower is better)
Translates to: LQMAVGPSAEVL*RPDIPTERRTG
Trigger: TCCTGTCCTTCTCTCCGTTGGAATGTCAGGTCTTCACAGCACCTCTGCAGATGGTCCCACAGCCATCTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
3UTR-3UTR CAA 90 bp CCCATTCCACAGATGGGTAAGTGGTATCTGGTAAGAGGAGGAGCTGGGATTCAGTTGAGATATAACCAGTaGTTTGCAGATGGCTGTGGG +
Preference number: 3 (lower is better)
Translates to: PIPQMGKWYLVRGGAGIQLRYNQ*FADGCG
Trigger: CCCACAGCCATCTGCAAACAACTGGTTATATCTCAA...CTGAATCCCAGCTCCTCCTCTTACCAGATACCACTTACCCATCTGTGGAATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR TCA 90 bp TCAGGCAGGGGCACCATGGTGAGGAAGTCGGAGACAAACTGGGCACAGCTGTCCGGTGCGAGGGCGGCTTaGGAGGGTCAGGCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: SGRGTMVRKSETNWAQLSGARAA*EGQAGA
Trigger: TGCCCCTGCCTGACCCTCTCAAGCCGCCCTCGCACC...GGACAGCTGTGCCCAGTTTGTCTCCGACTTCCTCACCATGGTGCCCCTGCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564297.5
CDS-3UTR GCA 90 bp CGAGGAGTACAGGTGCGAGGGCGGCTTGAGAGGGTCAGGCAGGGGCACCATGGTTGGGCCGGAGGGTTGTaGTCACGAACTTGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: RGVQVRGRLERVRQGHHGWAGGL*SRTWEL
Trigger: GAGCTCCCAAGTTCGTGAGCACAACCCTCCGGCCCA...ACCATGGTGCCCCTGCCTGACCCTCTCAAGCCGCCCTCGCACCTGTACTCCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564297.5
CDS-3UTR GCA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGTGCACCCGCAGGCCGTaGAGGGCATCCGGCTTTGCC +
Preference number: 4 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGCTRRP*RASGFA
Trigger: GGCAAAGCCGGATGCCCTGCACGGCCTGCGGGTGCA...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CCA 90 bp AGCACAGTGGTCGAGGAGTACAGGTGCGAGGGCGGCTTGAGAGGGTCAGGCAGGGGTAGGGCATCAGTGTaGGCCGGAGGGTTGTGCTCA +
Preference number: 4 (lower is better)
Translates to: STVVEEYRCEGGLRGSGRGRASV*AGGLCS
Trigger: TGAGCACAACCCTCCGGCCCACACTGATGCCCTACC...CCTGCCTGACCCTCTCAAGCCGCCCTCGCACCTGTACTCCTCGACCACTGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564297.5
CDS-3UTR TCA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGCCTTCTCCGCTTCCATaGGGCGCTCCTCCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGPSPLP*GAPPPP
Trigger: GGGAGGAGGAGGAGCGCCTCATGGAAGCGGAGAAGG...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR TCA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGCCTTGGGCTTCACAGTaGGTGGGCACACCTCCCGCG +
Preference number: 4 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGPWASQ*VGTPPA
Trigger: CGCGGGAGGTGTGCCCACTCACTGTGAAGCCCAAGG...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000394337.8
CDS-3UTR GCA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGCACTCGTTCAGGGGGTaGAGGAAGAGGGGCACGCGG +
Preference number: 4 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGHSFRG*RKRGTR
Trigger: CCGCGTGCCCCTCTTCCTGCACCCCCTGAACGAGTG...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR GCA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGACAAGGACCCAGGAGTaGACCCGCAGGCCGTGCAGG +
Preference number: 4 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGTRTQE*TRRPCR
Trigger: CCTGCACGGCCTGCGGGTGCACTCCTGGGTCCTTGT...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR GCA 90 bp TCAGGCAGGGGCACCATGGTGAGGAAGTCGGAGACAAACTGGGCACAGCTGTCCGTCGAGGAGTACAGGTaGGAGGGCGGCTTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: SGRGTMVRKSETNWAQLSVEEYR*EGGLRG
Trigger: CCCTCTCAAGCCGCCCTCGCACCTGTACTCCTCGAC...GGACAGCTGTGCCCAGTTTGTCTCCGACTTCCTCACCATGGTGCCCCTGCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564297.5
CDS-3UTR CCA 90 bp CACAGTGGTCGAGGAGTACAGGTGCGAGGGCGGCTTGAGAGGGTCAGGCAGGGGCTGGGTGTCTGGAGATaGAATGTCTCCCTCCGAGGA +
Preference number: 4 (lower is better)
Translates to: HSGRGVQVRGRLERVRQGLGVWR*NVSLRG
Trigger: TCCTCGGAGGGAGACATTCCATCTCCAGACACCCAG...CCCCTGCCTGACCCTCTCAAGCCGCCCTCGCACCTGTACTCCTCGACCACTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564297.5
CDS-3UTR TCA 90 bp GGTGGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGACGCGCTTGGAGGCCGTaGTGTGGTCCTCACGGCAGT +
Preference number: 4 (lower is better)
Translates to: GGLAVRPGVCVNRHWLDRRAWRP*CGPHGS
Trigger: ACTGCCGTGAGGACCACATCACGGCCTCCAAGCGCG...TCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR TCA 90 bp GTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGCGCGCTTGGAGGCCGTaGTGTGGTCCTCACGGCAGT +
Preference number: 4 (lower is better)
Translates to: VCVNRHWLDRGNTGARLRRAWRP*CGPHGS
Trigger: ACTGCCGTGAGGACCACATCACGGCCTCCAAGCGCG...CCGCAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR TCA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCAGGTGCGAGGGCGGCTTaGGAGGGTCAGGCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLAGARAA*EGQAGA
Trigger: TGCCCCTGCCTGACCCTCTCAAGCCGCCCTCGCACC...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000394337.8
CDS-3UTR GCA 90 bp GGTGGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGACACTCGTTCAGGGGGTaGAGGAAGAGGGGCACGCGG +
Preference number: 4 (lower is better)
Translates to: GGLAVRPGVCVNRHWLDRHSFRG*RKRGTR
Trigger: CCGCGTGCCCCTCTTCCTGCACCCCCTGAACGAGTG...TCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR GCA 90 bp GTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGCAGAAACACGCGCTCTaGCACGTCCTCCTCCGCGGG +
Preference number: 4 (lower is better)
Translates to: VCVNRHWLDRGNTGARLRQKHAL*HVLLRG
Trigger: CCCGCGGAGGAGGACGTGGCAGAGCGCGTGTTTCTG...CCGCAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR GCA 90 bp GGTGGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGACAGAAACACGCGCTCTaGCACGTCCTCCTCCGCGGG +
Preference number: 4 (lower is better)
Translates to: GGLAVRPGVCVNRHWLDRQKHAL*HVLLRG
Trigger: CCCGCGGAGGAGGACGTGGCAGAGCGCGTGTTTCTG...TCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR GCA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGGGTAGCGCAGCTGGATaGGCTCCTCCGCGACCAGAA +
Preference number: 4 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGGSAAG*APPRPE
Trigger: TTCTGGTCGCGGAGGAGCGCATCCAGCTGCGCTACC...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp AGCACAGTGGTCGAGGAGTACAGGTGCGAGGGCGGCTTGAGAGGGTCAGGCAGGTCAGGACCTCCATTCTaGAGCGTCTCTGGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: STVVEEYRCEGGLRGSGRSGPPF*SVSGCL
Trigger: CAGACACCCAGAGACGCTCCAGAATGGAGGTCCTGA...CCTGCCTGACCCTCTCAAGCCGCCCTCGCACCTGTACTCCTCGACCACTGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564297.5
CDS-3UTR CCA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGCGGTCCGGGCACAGATaGCTGTACTGGCGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGRSGHR*LYWREK
Trigger: CTTCTCCCGCCAGTACAGCCATCTGTGCCCGGACCG...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CCA 90 bp GGTGGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGATGCACGCGCAGAGCCTaGGGGTGGCCAGGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: GGLAVRPGVCVNRHWLDRCTRRA*GWPGLK
Trigger: CTTCAAGCCTGGCCACCCCCAGGCTCTGCGCGTGCA...TCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGCTCGGGGTCCGAAGCTaGCATGGCGGTAGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGLGVRS*HGGRRG
Trigger: TCCTCTCCTACCGCCATGCCAGCTTCGGACCCCGAG...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGCTCCGCGGGCTTCGCTaGGTTGCGGAAGAACCGCTC +
Preference number: 4 (lower is better)
Translates to: VCVNRHWLDRGNTGARLRLRGLR*VAEEPL
Trigger: GAGCGGTTCTTCCGCAACCCAGCGAAGCCCGCGGAG...CCGCAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGGGGCTTCACAGTGAGTaGGCACACCTCCCGCGTCAG +
Preference number: 4 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGGLHSE*AHLPRQ
Trigger: CTGACGCGGGAGGTGTGCCCACTCACTGTGAAGCCC...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000394337.8
CDS-3UTR TCA 90 bp GTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGGGCCGGGAGCTCCGCTaGGACAGTGATCTGGATCTC +
Preference number: 4 (lower is better)
Translates to: VCVNRHWLDRGNTGARLRGRELR*DSDLDL
Trigger: GAGATCCAGATCACTGTCTCAGCGGAGCTCCCGGCC...CCGCAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR TCA 90 bp GACCTGACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGACCTTCTCCGCTTCCATaGGGCGCTCCTCCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: DLTFQRREGQEANDRPRGPSPLP*GAPPPP
Trigger: GGGAGGAGGAGGAGCGCCTCATGGAAGCGGAGAAGG...TCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGTCAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS-3UTR TCA 90 bp GACCTGACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGACGCGCTTGGAGGCCGTaGTGTGGTCCTCACGGCAGT +
Preference number: 4 (lower is better)
Translates to: DLTFQRREGQEANDRPRGRAWRP*CGPHGS
Trigger: ACTGCCGTGAGGACCACATCACGGCCTCCAAGCGCG...TCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGTCAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR GCA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCATGCACCCGCAGGCCGTaGAGGGCATCCGGCTTTGCC +
Preference number: 4 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLACTRRP*RASGFA
Trigger: GGCAAAGCCGGATGCCCTGCACGGCCTGCGGGTGCA...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR GCA 90 bp GGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGACAAGGACCCAGGAGTaGACCCGCAGGCCGTGCAGG +
Preference number: 4 (lower is better)
Translates to: GVCVNRHWLDRGNTGARLTRTQE*TRRPCR
Trigger: CCTGCACGGCCTGCGGGTGCACTCCTGGGTCCTTGT...CAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR GCA 90 bp CTGACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGAGGAACAAGGACCCAGGAGTaGACCCGCAGGCCGTGCAGG +
Preference number: 4 (lower is better)
Translates to: LTFQRREGQEANDRPRGGTRTQE*TRRPCR
Trigger: CCTGCACGGCCTGCGGGTGCACTCCTGGGTCCTTGT...TCCTCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS-3UTR GCA 90 bp GGTGGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGTAGCGCAGCTGGATaGGCTCCTCCGCGACCAGAA +
Preference number: 4 (lower is better)
Translates to: GGLAVRPGVCVNRHWLDRGSAAG*APPRPE
Trigger: TTCTGGTCGCGGAGGAGCGCATCCAGCTGCGCTACC...TCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR GCA 90 bp GACCTGACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGATGCTGTCCACCTCGGTaGGCCGCAGGAACTCGCGCT +
Preference number: 4 (lower is better)
Translates to: DLTFQRREGQEANDRPRGCCPPR*AAGTRA
Trigger: AGCGCGAGTTCCTGCGGCGCACCGAGGTGGACAGCA...TCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGTCAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR GCA 90 bp GGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGTGCTGTCCACCTCGGTaGGCCGCAGGAACTCGCGCT +
Preference number: 4 (lower is better)
Translates to: GVCVNRHWLDRGNTGARLCCPPR*AAGTRA
Trigger: AGCGCGAGTTCCTGCGGCGCACCGAGGTGGACAGCA...CAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR GCA 90 bp GGTGGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGCGCTGCTCCAGGATaGGGATGCGGAACATGGCCT +
Preference number: 4 (lower is better)
Translates to: GGLAVRPGVCVNRHWLDRGAAPG*GCGTWP
Trigger: AGGCCATGTTCCGCATCCGCATCCTGGAGCAGCGCC...TCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR GCA 90 bp GTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGGGCGCTGCTCCAGGATaGGGATGCGGAACATGGCCT +
Preference number: 4 (lower is better)
Translates to: VCVNRHWLDRGNTGARLRGAAPG*GCGTWP
Trigger: AGGCCATGTTCCGCATCCGCATCCTGGAGCAGCGCC...CCGCAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GGTGGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGACGGTCCGGGCACAGATaGCTGTACTGGCGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: GGLAVRPGVCVNRHWLDRRSGHR*LYWREK
Trigger: CTTCTCCCGCCAGTACAGCCATCTGTGCCCGGACCG...TCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CCA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGGGTAGGGCATCAGTGTaGGCCGGAGGGTTGTGCTCA +
Preference number: 4 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGGRASV*AGGLCS
Trigger: TGAGCACAACCCTCCGGCCCACACTGATGCCCTACC...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CCA 90 bp GGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGTGCACGCGCAGAGCCTaGGGGTGGCCAGGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: GVCVNRHWLDRGNTGARLCTRRA*GWPGLK
Trigger: CTTCAAGCCTGGCCACCCCCAGGCTCTGCGCGTGCA...CAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GACCTGACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGATGCACGCGCAGAGCCTaGGGGTGGCCAGGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: DLTFQRREGQEANDRPRGCTRRA*GWPGLK
Trigger: CTTCAAGCCTGGCCACCCCCAGGCTCTGCGCGTGCA...TCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGTCAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CCA 90 bp CTGACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGAGGACTCCGCGGGCTTCGCTaGGTTGCGGAAGAACCGCTC +
Preference number: 4 (lower is better)
Translates to: LTFQRREGQEANDRPRGGLRGLR*VAEEPL
Trigger: GAGCGGTTCTTCCGCAACCCAGCGAAGCCCGCGGAG...TCCTCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CCA 90 bp CATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGAGGAAGGGGAGCTGGGCCAGGAATaGGGCCAGGTAGTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: HSNGEKDRKQTTGQGEEGELGQE*GQVVQL
Trigger: CAGCTGGACTACCTGGCCCCATTCCTGGCCCAGCTC...CCCTTCCTCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGATCTCCTGGCGGGAGCTaGGCCAGGAATGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGSPGGS*ARNGAR
Trigger: CCTGGCCCCATTCCTGGCCCAGCTCCCGCCAGGAGA...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCATCTCCTGGCGGGAGCTaGGCCAGGAATGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLASPGGS*ARNGAR
Trigger: CCTGGCCCCATTCCTGGCCCAGCTCCCGCCAGGAGA...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp CTGACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGAGGACGCGTCAGGTCCATGTaGCACAGGTCCAGCGAGCCG +
Preference number: 4 (lower is better)
Translates to: LTFQRREGQEANDRPRGGRVRSM*HRSSEP
Trigger: CGGCTCGCTGGACCTGTGCCACATGGACCTGACGCG...TCCTCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS-3UTR TCA 90 bp GACCTGACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGAGGCCGGGAGCTCCGCTaGGACAGTGATCTGGATCTC +
Preference number: 4 (lower is better)
Translates to: DLTFQRREGQEANDRPRGGRELR*DSDLDL
Trigger: GAGATCCAGATCACTGTCTCAGCGGAGCTCCCGGCC...TCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGTCAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS-3UTR TCA 90 bp GGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGGGCCGGGAGCTCCGCTaGGACAGTGATCTGGATCTC +
Preference number: 4 (lower is better)
Translates to: GVCVNRHWLDRGNTGARLGRELR*DSDLDL
Trigger: GAGATCCAGATCACTGTCTCAGCGGAGCTCCCGGCC...CAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR TCA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGACCTTCTCCGCTTCCATaGGGCGCTCCTCCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGPSPLP*GAPPPP
Trigger: GGGAGGAGGAGGAGCGCCTCATGGAAGCGGAGAAGG...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR TCA 90 bp GTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGGCTCCACCTCGAAGCTaGTGCACATGTCGGGCGTCA +
Preference number: 4 (lower is better)
Translates to: VCVNRHWLDRGNTGARLRAPPRS*CTCRAS
Trigger: TGACGCCCGACATGTGCATCAGCTTCGAGGTGGAGC...CCGCAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR TCA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGGCGAGCCGTAGCCGTTaGCGCAGTAAGCATCATAGC +
Preference number: 4 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGASRSR*RSKHHS
Trigger: GCTATGATGCTTACTGCGTCAACGGCTACGGCTCGC...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000394337.8
CDS-3UTR TCA 90 bp AGCTGGGATTCAGTCCTCAAATTCTGGGGCATGCATCTTAGCCTTCCCCATCCCCCTTGGGCTTCACAGTaGGTGGGCACACCTCCCGCG +
Preference number: 4 (lower is better)
Translates to: SWDSVLKFWGMHLSLPHPPWASQ*VGTPPA
Trigger: CGCGGGAGGTGTGCCCACTCACTGTGAAGCCCAAGG...GGGATGGGGAAGGCTAAGATGCATGCCCCAGAATTTGAGGACTGAATCCCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS-3UTR GCA 90 bp CGAGGAGTACAGGTGCGAGGGCGGCTTGAGAGGGTCAGGCAGGGGCACCATGGTTCTCTGAGCGTCTCCTaGTTTAAGGTGATTTCCTCC +
Preference number: 4 (lower is better)
Translates to: RGVQVRGRLERVRQGHHGSLSVS*FKVISS
Trigger: GGAGGAAATCACCTTAAAGCAGGAGACGCTCAGAGA...ACCATGGTGCCCCTGCCTGACCCTCTCAAGCCGCCCTCGCACCTGTACTCCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564297.5
CDS-3UTR GCA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGGCGGGAGAAGTTGTCTaGCACCTGCAGCAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGAGEVV*HLQQVF
Trigger: GAACACCTGCTGCAGGTGGCAGACAACTTCTCCCGC...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR GCA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGCAGGGCATCCGGCTTTaGCTTCTCCGCTTCCATGAG +
Preference number: 4 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGQGIRL*LLRFHE
Trigger: CTCATGGAAGCGGAGAAGGCAAAGCCGGATGCCCTG...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR GCA 90 bp CCCATTCCACAGATGGGTAAGTGGTATCTGGTAAGAGGAGGAGCTGGGATTCAGTGCACCCGCAGGCCGTaGAGGGCATCCGGCTTTGCC +
Preference number: 4 (lower is better)
Translates to: PIPQMGKWYLVRGGAGIQCTRRP*RASGFA
Trigger: GGCAAAGCCGGATGCCCTGCACGGCCTGCGGGTGCA...CTGAATCCCAGCTCCTCCTCTTACCAGATACCACTTACCCATCTGTGGAATGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS-3UTR GCA 90 bp GTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGGGGGAGATCTCAATCTaGTCCACCCACGAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: VCVNRHWLDRGNTGARLRGEISI*STHEWG
Trigger: GCCCCACTCGTGGGTGGAGCAGATTGAGATCTCCCC...CCGCAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGAC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR GCA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCACAGAAACACGCGCTCTaGCACGTCCTCCTCCGCGGG +
Preference number: 4 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLAQKHAL*HVLLRG
Trigger: CCCGCGGAGGAGGACGTGGCAGAGCGCGTGTTTCTG...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR GCA 90 bp GACCTGACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGAGGTAGCGCAGCTGGATaGGCTCCTCCGCGACCAGAA +
Preference number: 4 (lower is better)
Translates to: DLTFQRREGQEANDRPRGGSAAG*APPRPE
Trigger: TTCTGGTCGCGGAGGAGCGCATCCAGCTGCGCTACC...TCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGTCAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR GCA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGATGCTGTCCACCTCGGTaGGCCGCAGGAACTCGCGCT +
Preference number: 4 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGCCPPR*AAGTRA
Trigger: AGCGCGAGTTCCTGCGGCGCACCGAGGTGGACAGCA...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR GCA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCATGCTGTCCACCTCGGTaGGCCGCAGGAACTCGCGCT +
Preference number: 4 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLACCPPR*AAGTRA
Trigger: AGCGCGAGTTCCTGCGGCGCACCGAGGTGGACAGCA...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR GCA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAGCAGCTTCTTGGTGTaGTCCATGGGCTCCACCTCG +
Preference number: 4 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGSSFLV*SMGSTS
Trigger: CGAGGTGGAGCCCATGGAGCACACCAAGAAGCTGCT...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR GCA 90 bp GTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGCGCAGGTGCTCTTCGTaGATCATGCGCTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: VCVNRHWLDRGNTGARLRRRCSS*IMRSMA
Trigger: GGCCATGGAGCGCATGATGCACGAAGAGCACCTGCG...CCGCAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR GCA 90 bp GGTGGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGATCCACCTGCCGCAGGTaGTCTTCGTGCATCATGCGC +
Preference number: 4 (lower is better)
Translates to: GGLAVRPGVCVNRHWLDRSTCRR*SSCIMR
Trigger: GCGCATGATGCACGAAGAGCACCTGCGGCAGGTGGA...TCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR GCA 90 bp CATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGAGGAAGGGTCCACCTGCCGCAGGTaGTCTTCGTGCATCATGCGC +
Preference number: 4 (lower is better)
Translates to: HSNGEKDRKQTTGQGEEGSTCRR*SSCIMR
Trigger: GCGCATGATGCACGAAGAGCACCTGCGGCAGGTGGA...CCCTTCCTCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR GCA 90 bp CATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGAGGAAGGGGCTCCAGGATGCGGATaGGGAACATGGCCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: HSNGEKDRKQTTGQGEEGAPGCG*GTWPES
Trigger: GCTCTCAGGCCATGTTCCGCATCCGCATCCTGGAGC...CCCTTCCTCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR GCA 90 bp CATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGAGGAAGGGTGTCGATTGAGGCGCTaGTCCAGGATGCGGATGCGG +
Preference number: 4 (lower is better)
Translates to: HSNGEKDRKQTTGQGEEGCRLRR*SRMRMR
Trigger: CCGCATCCGCATCCTGGAGCAGCGCCTCAATCGACA...CCCTTCCTCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR GCA 90 bp GGTGGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGATGTCGATTGAGGCGCTaGTCCAGGATGCGGATGCGG +
Preference number: 4 (lower is better)
Translates to: GGLAVRPGVCVNRHWLDRCRLRR*SRMRMR
Trigger: CCGCATCCGCATCCTGGAGCAGCGCCTCAATCGACA...TCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR GCA 90 bp ACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGAGGAAGGGTCGAGGAGTACAGGTaGGAGGGCGGCTTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: TFQRREGQEANDRPRGGRVEEYR*EGGLRG
Trigger: CCCTCTCAAGCCGCCCTCGCACCTGTACTCCTCGAC...CCTTCCTCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS-3UTR GCA 90 bp GGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGGTCGAGGAGTACAGGTaGGAGGGCGGCTTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: GVCVNRHWLDRGNTGARLVEEYR*EGGLRG
Trigger: CCCTCTCAAGCCGCCCTCGCACCTGTACTCCTCGAC...CAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CCA 90 bp GGAGTACAGGTGCGAGGGCGGCTTGAGAGGGTCAGGCAGGGGCACCATGGTGAGGCTGAGACAGTGATCTaGATCTCTGACAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: GVQVRGRLERVRQGHHGEAETVI*ISDSFF
Trigger: GAAGAAGCTGTCAGAGATCCAGATCACTGTCTCAGC...CTCACCATGGTGCCCCTGCCTGACCCTCTCAAGCCGCCCTCGCACCTGTACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564297.5
CDS-3UTR CCA 90 bp GACCTGACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGACTCGGGGTCCGAAGCTaGCATGGCGGTAGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: DLTFQRREGQEANDRPRGLGVRS*HGGRRG
Trigger: TCCTCTCCTACCGCCATGCCAGCTTCGGACCCCGAG...TCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGTCAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CCA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCACTCCGCGGGCTTCGCTaGGTTGCGGAAGAACCGCTC +
Preference number: 4 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLALRGLR*VAEEPL
Trigger: GAGCGGTTCTTCCGCAACCCAGCGAAGCCCGCGGAG...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGACTCCGCGGGCTTCGCTaGGTTGCGGAAGAACCGCTC +
Preference number: 4 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGLRGLR*VAEEPL
Trigger: GAGCGGTTCTTCCGCAACCCAGCGAAGCCCGCGGAG...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGACGCGTCAGGTCCATGTaGCACAGGTCCAGCGAGCCG +
Preference number: 4 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGRVRSM*HRSSEP
Trigger: CGGCTCGCTGGACCTGTGCCACATGGACCTGACGCG...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CCA 90 bp GGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGGGGCTTCACAGTGAGTaGGCACACCTCCCGCGTCAG +
Preference number: 4 (lower is better)
Translates to: GVCVNRHWLDRGNTGARLGLHSE*AHLPRQ
Trigger: CTGACGCGGGAGGTGTGCCCACTCACTGTGAAGCCC...CAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000394337.8
CDS-3UTR TCA 90 bp TGGTACTTGAGCACAGTGGTCGAGGAGTACAGGTGCGAGGGCGGCTTGAGAGGGTCTTCTCCAGGTCTCTaGGCGTCTCCTGCTTTAAGG +
Preference number: 4 (lower is better)
Translates to: WYLSTVVEEYRCEGGLRGSSPGL*ASPALR
Trigger: CCTTAAAGCAGGAGACGCTCAGAGACCTGGAGAAGA...CCCTCTCAAGCCGCCCTCGCACCTGTACTCCTCGACCACTGTGCTCAAGTACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564297.5
CDS-3UTR TCA 90 bp CATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGAGGAAGGGGCAGGGGCACCATGGTaGGGAAGTCGGAGACAAACT +
Preference number: 4 (lower is better)
Translates to: HSNGEKDRKQTTGQGEEGAGAPW*GSRRQT
Trigger: AGTTTGTCTCCGACTTCCTCACCATGGTGCCCCTGC...CCCTTCCTCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS-3UTR TCA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGCAAGGCCATTGCTATTaGGGTACGGGGCCCACTTCT +
Preference number: 4 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGQGHCY*GTGPTS
Trigger: AGAAGTGGGCCCCGTACCTCAATAGCAATGGCCTTG...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR TCA 90 bp GGTGGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAAGTCCTCATAGGTGGTaGGGCGGCTCACAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: GGLAVRPGVCVNRHWLDRSPHRW*GGSQGH
Trigger: ATGGCCTTGTGAGCCGCCTCACCACCTATGAGGACT...TCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR TCA 90 bp GTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGAATGGGCCGGGGGTTTaGCTCTGCACTGCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: VCVNRHWLDRGNTGARLRNGPGV*LCTAQS
Trigger: ACTCTGAGCAGTGCAGAGTCAAACCCCCGGCCCATT...CCGCAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR TCA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGGGAAGAACCGCTCTGTaGTTTTCACAATGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGGRTAL*FSQWAG
Trigger: CCCGGCCCATTGTGAAAATCACAGAGCGGTTCTTCC...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR TCA 90 bp CATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGAGGAAGGGGTTCCTTGTGTCGATTaGGGCGCTGCTCCAGGATGC +
Preference number: 4 (lower is better)
Translates to: HSNGEKDRKQTTGQGEEGVPCVD*GAAPGC
Trigger: GCATCCTGGAGCAGCGCCTCAATCGACACAAGGAAC...CCCTTCCTCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR TCA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGTCCCCTTCTGGTACTTaGGCACAGTGGTCGAGGAGT +
Preference number: 4 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGSPSGT*AQWSRS
Trigger: ACTCCTCGACCACTGTGCTCAAGTACCAGAAGGGGA...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000394337.8
CDS-3UTR TCA 90 bp AGGGGCACCATGGTGAGGAAGTCGGAGACAAACTGGGCACAGCTGTCCCAGTTGTCCCCTTCTGGTACTTaGGCACAGTGGTCGAGGAGT +
Preference number: 4 (lower is better)
Translates to: RGTMVRKSETNWAQLSQLSPSGT*AQWSRS
Trigger: ACTCCTCGACCACTGTGCTCAAGTACCAGAAGGGGA...CAACTGGGACAGCTGTGCCCAGTTTGTCTCCGACTTCCTCACCATGGTGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564297.5
CDS-3UTR TCA 90 bp AGGGGCACCATGGTGAGGAAGTCGGAGACAAACTGGGCACAGCTGTCCCAGTTGACTTGGGAGCTCCGCTaGGACAGTGATCTGGATCTC +
Preference number: 4 (lower is better)
Translates to: RGTMVRKSETNWAQLSQLTWELR*DSDLDL
Trigger: GAGATCCAGATCACTGTCTCAGCGGAGCTCCCAAGT...CAACTGGGACAGCTGTGCCCAGTTTGTCTCCGACTTCCTCACCATGGTGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564297.5
CDS-3UTR GCA 90 bp GGTGGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGCGGGAGAAGTTGTCTaGCACCTGCAGCAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: GGLAVRPGVCVNRHWLDRAGEVV*HLQQVF
Trigger: GAACACCTGCTGCAGGTGGCAGACAACTTCTCCCGC...TCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR GCA 90 bp GGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGGGGGAGATCTCAATCTaGTCCACCCACGAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: GVCVNRHWLDRGNTGARLGEISI*STHEWG
Trigger: GCCCCACTCGTGGGTGGAGCAGATTGAGATCTCCCC...CAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR GCA 90 bp ACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGAGGAAGGGGGGAGATCTCAATCTaGTCCACCCACGAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: TFQRREGQEANDRPRGGRGEISI*STHEWG
Trigger: GCCCCACTCGTGGGTGGAGCAGATTGAGATCTCCCC...CCTTCCTCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR GCA 90 bp CCCATTCCACAGATGGGTAAGTGGTATCTGGTAAGAGGAGGAGCTGGGATTCAGCAGAAACACGCGCTCTaGCACGTCCTCCTCCGCGGG +
Preference number: 4 (lower is better)
Translates to: PIPQMGKWYLVRGGAGIQQKHAL*HVLLRG
Trigger: CCCGCGGAGGAGGACGTGGCAGAGCGCGTGTTTCTG...CTGAATCCCAGCTCCTCCTCTTACCAGATACCACTTACCCATCTGTGGAATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR GCA 90 bp GTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGAGCAGCTTCTTGGTGTaGTCCATGGGCTCCACCTCG +
Preference number: 4 (lower is better)
Translates to: VCVNRHWLDRGNTGARLRSSFLV*SMGSTS
Trigger: CGAGGTGGAGCCCATGGAGCACACCAAGAAGCTGCT...CCGCAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR GCA 90 bp TGCATCTTAGCCTTCCCCATCCCACTTGGTGAGGTGGGCCACCCTAGTCACATTCGCAGGTGCTCTTCGTaGATCATGCGCTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: CILAFPIPLGEVGHPSHIRRCSS*IMRSMA
Trigger: GGCCATGGAGCGCATGATGCACGAAGAGCACCTGCG...AATGTGACTAGGGTGGCCCACCTCACCAAGTGGGATGGGGAAGGCTAAGATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR GCA 90 bp GGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGTCCACCTGCCGCAGGTaGTCTTCGTGCATCATGCGC +
Preference number: 4 (lower is better)
Translates to: GVCVNRHWLDRGNTGARLSTCRR*SSCIMR
Trigger: GCGCATGATGCACGAAGAGCACCTGCGGCAGGTGGA...CAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR GCA 90 bp AGCTGGGATTCAGTCCTCAAATTCTGGGGCATGCATCTTAGCCTTCCCCATCCCGGCGCTGCTCCAGGATaGGGATGCGGAACATGGCCT +
Preference number: 4 (lower is better)
Translates to: SWDSVLKFWGMHLSLPHPGAAPG*GCGTWP
Trigger: AGGCCATGTTCCGCATCCGCATCCTGGAGCAGCGCC...GGGATGGGGAAGGCTAAGATGCATGCCCCAGAATTTGAGGACTGAATCCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGCTGGGTGTCTGGAGATaGAATGTCTCCCTCCGAGGA +
Preference number: 4 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGLGVWR*NVSLRG
Trigger: TCCTCGGAGGGAGACATTCCATCTCCAGACACCCAG...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336825.12
ENST00000394337.8
CDS-3UTR CCA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGCACAGATGGCTGTACTaGCGGGAGAAGTTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGHRWLY*REKLSA
Trigger: GGCAGACAACTTCTCCCGCCAGTACAGCCATCTGTG...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CCA 90 bp CTGACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGAGGAGGTAGGGCATCAGTGTaGGCCGGAGGGTTGTGCTCA +
Preference number: 4 (lower is better)
Translates to: LTFQRREGQEANDRPRGGGRASV*AGGLCS
Trigger: TGAGCACAACCCTCCGGCCCACACTGATGCCCTACC...TCCTCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS-3UTR CCA 90 bp GTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGAGCCGCTTCTTCTCCTaGGCTCTGATCTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VCVNRHWLDRGNTGARLRSRFFS*ALISCC
Trigger: GCAGCAGGAGATCAGAGCCCAGGAGAAGAAGCGGCT...CCGCAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CCA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCACTCGGGGTCCGAAGCTaGCATGGCGGTAGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLALGVRS*HGGRRG
Trigger: TCCTCTCCTACCGCCATGCCAGCTTCGGACCCCGAG...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCAGAGCTGGGCCAGGAATaGGGCCAGGTAGTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLAELGQE*GQVVQL
Trigger: CAGCTGGACTACCTGGCCCCATTCCTGGCCCAGCTC...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGAGCTGGGCCAGGAATaGGGCCAGGTAGTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGELGQE*GQVVQL
Trigger: CAGCTGGACTACCTGGCCCCATTCCTGGCCCAGCTC...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GGTGGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGAGCTCCCCCAGGCGTaGGTCCTTGTAGAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: GGLAVRPGVCVNRHWLDRELPQA*VLVELF
Trigger: GAAAAGCTCTACAAGGACCCACGCCTGGGGGAGCTC...TCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGGAGGTTTCCTTTCTCTaGCAGCTCTGGCTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: VCVNRHWLDRGNTGARLREVSFL*QLWLRP
Trigger: GGGCCTCAGCCAGAGCTGCCAGAGAAAGGAAACCTC...CCGCAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GGTGGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGAGGTTTCCTTTCTCTaGCAGCTCTGGCTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: GGLAVRPGVCVNRHWLDREVSFL*QLWLRP
Trigger: GGGCCTCAGCCAGAGCTGCCAGAGAAAGGAAACCTC...TCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR TCA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGTCTTCTCCAGGTCTCTaGGCGTCTCCTGCTTTAAGG +
Preference number: 4 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGSSPGL*ASPALR
Trigger: CCTTAAAGCAGGAGACGCTCAGAGACCTGGAGAAGA...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR TCA 90 bp GGTGGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGCTCCGCTGAGACAGTaGTCTGGATCTCTGACAGCT +
Preference number: 4 (lower is better)
Translates to: GGLAVRPGVCVNRHWLDRAPLRQ*SGSLTA
Trigger: AGCTGTCAGAGATCCAGATCACTGTCTCAGCGGAGC...TCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR TCA 90 bp GGTGGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGACAAGGCCATTGCTATTaGGGTACGGGGCCCACTTCT +
Preference number: 4 (lower is better)
Translates to: GGLAVRPGVCVNRHWLDRQGHCY*GTGPTS
Trigger: AGAAGTGGGCCCCGTACCTCAATAGCAATGGCCTTG...TCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR TCA 90 bp GGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGAATGGGCCGGGGGTTTaGCTCTGCACTGCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: GVCVNRHWLDRGNTGARLNGPGV*LCTAQS
Trigger: ACTCTGAGCAGTGCAGAGTCAAACCCCCGGCCCATT...CAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR TCA 90 bp CTGACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGAGGAAATGGGCCGGGGGTTTaGCTCTGCACTGCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: LTFQRREGQEANDRPRGGNGPGV*LCTAQS
Trigger: ACTCTGAGCAGTGCAGAGTCAAACCCCCGGCCCATT...TCCTCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR TCA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCTCCACCTCGAAGCTaGTGCACATGTCGGGCGTCA +
Preference number: 4 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGAPPRS*CTCRAS
Trigger: TGACGCCCGACATGTGCATCAGCTTCGAGGTGGAGC...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR TCA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCAGCTCCACCTCGAAGCTaGTGCACATGTCGGGCGTCA +
Preference number: 4 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLAAPPRS*CTCRAS
Trigger: TGACGCCCGACATGTGCATCAGCTTCGAGGTGGAGC...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR TCA 90 bp GACCTGACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGAGTTCCTTGTGTCGATTaGGGCGCTGCTCCAGGATGC +
Preference number: 4 (lower is better)
Translates to: DLTFQRREGQEANDRPRGVPCVD*GAAPGC
Trigger: GCATCCTGGAGCAGCGCCTCAATCGACACAAGGAAC...TCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGTCAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR GCA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGATCCACCTGCCGCAGGTaGTCTTCGTGCATCATGCGC +
Preference number: 4 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGSTCRR*SSCIMR
Trigger: GCGCATGATGCACGAAGAGCACCTGCGGCAGGTGGA...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR GCA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGTTGTTGATGAGCCGCTaGTTGAAGTCGCTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGLLMSR*LKSLRH
Trigger: GTGCCTCAGCGACTTCAAGCAGCGGCTCATCAACAA...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR GCA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGCACTGCTGCTTCTTTTaGAGCTCCTGGGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGHCCFF*SSWVSF
Trigger: GAAGGAGACCCAGGAGCTGCAAAAGAAGCAGCAGTG...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR GCA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGTCCTGGTACCACTGCTaGTTCTTTTGCAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGSWYHC*FFCSSW
Trigger: CCAGGAGCTGCAAAAGAAGCAGCAGTGGTACCAGGA...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR GCA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCTCCAGGATGCGGATaGGGAACATGGCCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGAPGCG*GTWPES
Trigger: GCTCTCAGGCCATGTTCCGCATCCGCATCCTGGAGC...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR GCA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCAGCTCCAGGATGCGGATaGGGAACATGGCCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLAAPGCG*GTWPES
Trigger: GCTCTCAGGCCATGTTCCGCATCCGCATCCTGGAGC...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR GCA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCATGTCGATTGAGGCGCTaGTCCAGGATGCGGATGCGG +
Preference number: 4 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLACRLRR*SRMRMR
Trigger: CCGCATCCGCATCCTGGAGCAGCGCCTCAATCGACA...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR GCA 90 bp CTGACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGAGGAGGCTGTGGGACCATCTaGAGAGGTGCTGTGAAGACC +
Preference number: 4 (lower is better)
Translates to: LTFQRREGQEANDRPRGGGCGTI*RGAVKT
Trigger: GGTCTTCACAGCACCTCTGCAGATGGTCCCACAGCC...TCCTCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GGTGGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGATCAGGACCTCCATTCTaGAGCGTCTCTGGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: GGLAVRPGVCVNRHWLDRSGPPF*SVSGCL
Trigger: CAGACACCCAGAGACGCTCCAGAATGGAGGTCCTGA...TCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CCA 90 bp ACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGAGGAAGGAGCCGCTTCTTCTCCTaGGCTCTGATCTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TFQRREGQEANDRPRGGRSRFFS*ALISCC
Trigger: GCAGCAGGAGATCAGAGCCCAGGAGAAGAAGCGGCT...CCTTCCTCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS-3UTR CCA 90 bp GGTGGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGATGCTCCACCCACGAGTaGGGCATGTCGAAGCTCTTA +
Preference number: 4 (lower is better)
Translates to: GGLAVRPGVCVNRHWLDRCSTHE*GMSKLL
Trigger: TAAGAGCTTCGACATGCCCCACTCGTGGGTGGAGCA...TCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CCA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGACTCTGTCATTGTCCTaGGTGTCTCCTCCCGCTTCA +
Preference number: 4 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGTLSLS*VSPPAS
Trigger: TGAAGCGGGAGGAGACACCCAGGACAATGACAGAGT...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GGTGGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGTAGAGCAGCTTCTTaGTGTGCTCCATGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: GGLAVRPGVCVNRHWLDRGRAAS*CAPWAP
Trigger: TGGAGCCCATGGAGCACACCAAGAAGCTGCTCTACC...TCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CCA 90 bp GTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGCCCAGACCTGATGTCTaGACAGCTTCTCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: VCVNRHWLDRGNTGARLRPRPDV*TASPPS
Trigger: AGAGGGAGGAGAAGCTGTCCAGACATCAGGTCTGGG...CCGCAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CCA 90 bp GTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGGCATCATGCGCTCCATaGCCTCCCGATATTCCTTGC +
Preference number: 4 (lower is better)
Translates to: VCVNRHWLDRGNTGARLRASCAP*PPDIPC
Trigger: GCAAGGAATATCGGGAGGCCATGGAGCGCATGATGC...CCGCAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp AGGTGCTGTGAAGACCTGACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACGAGCTGGGCCAGGAATaGGGCCAGGTAGTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: RCCEDLTFQRREGQEANDELGQE*GQVVQL
Trigger: CAGCTGGACTACCTGGCCCCATTCCTGGCCCAGCTC...GTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGTCAGGTCTTCACAGCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGTTCTCAAAGCGGGCCTaGATGAGGTTGGCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGFSKRA*MRLALL
Trigger: CAACAAGGCCAACCTCATCCAGGCCCGCTTTGAGAA...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGGAGCTCCCCCAGGCGTaGGTCCTTGTAGAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: GVCVNRHWLDRGNTGARLELPQA*VLVELF
Trigger: GAAAAGCTCTACAAGGACCCACGCCTGGGGGAGCTC...CAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCATTTCTCTGGCAGCTCTaGCTGAGGCCCCAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLAFLWQL*LRPQEG
Trigger: TCCCTCCTGGGGCCTCAGCCAGAGCTGCCAGAGAAA...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp TGCATCTTAGCCTTCCCCATCCCACTTGGTGAGGTGGGCCACCCTAGTCACATTGAGGTTTCCTTTCTCTaGCAGCTCTGGCTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: CILAFPIPLGEVGHPSHIEVSFL*QLWLRP
Trigger: GGGCCTCAGCCAGAGCTGCCAGAGAAAGGAAACCTC...AATGTGACTAGGGTGGCCCACCTCACCAAGTGGGATGGGGAAGGCTAAGATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GTCAGGCAGGGGCACCATGGTGAGGAAGTCGGAGACAAACTGGGCACAGCTGTCAAGCAGTTCCCCTTCTaGTACTTGAGCACAGTGGTC +
Preference number: 4 (lower is better)
Translates to: VRQGHHGEEVGDKLGTAVKQFPF*YLSTVV
Trigger: GACCACTGTGCTCAAGTACCAGAAGGGGAACTGCTT...GACAGCTGTGCCCAGTTTGTCTCCGACTTCCTCACCATGGTGCCCCTGCCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564297.5
CDS-3UTR CCA 90 bp CATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGAGGAAGGGAGGGGAGGAAGGGGGTaGTCCCAGGCTATAGATAAC +
Preference number: 4 (lower is better)
Translates to: HSNGEKDRKQTTGQGEEGRGGRG*SQAIDN
Trigger: GTTATCTATAGCCTGGGACCACCCCCTTCCTCCCCT...CCCTTCCTCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR TCA 90 bp GTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGTCTTCTCCAGGTCTCTaGGCGTCTCCTGCTTTAAGG +
Preference number: 4 (lower is better)
Translates to: VCVNRHWLDRGNTGARLRSSPGL*ASPALR
Trigger: CCTTAAAGCAGGAGACGCTCAGAGACCTGGAGAAGA...CCGCAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR TCA 90 bp CATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGAGGAAGGGTCTTCTCCAGGTCTCTaGGCGTCTCCTGCTTTAAGG +
Preference number: 4 (lower is better)
Translates to: HSNGEKDRKQTTGQGEEGSSPGL*ASPALR
Trigger: CCTTAAAGCAGGAGACGCTCAGAGACCTGGAGAAGA...CCCTTCCTCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS-3UTR TCA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCAGCAGGGGCACCATGGTaGGGAAGTCGGAGACAAACT +
Preference number: 4 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLAAGAPW*GSRRQT
Trigger: AGTTTGTCTCCGACTTCCTCACCATGGTGCCCCTGC...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR TCA 90 bp GAGCCGATAAGCATGGAGCAGAGCAGCGTACTGAAGTCAAAGCAGTTCCCCTTCGCAGGGGCACCATGGTaGGGAAGTCGGAGACAAACT +
Preference number: 4 (lower is better)
Translates to: EPISMEQSSVLKSKQFPFAGAPW*GSRRQT
Trigger: AGTTTGTCTCCGACTTCCTCACCATGGTGCCCCTGC...GAAGGGGAACTGCTTTGACTTCAGTACGCTGCTCTGCTCCATGCTTATCGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564297.5
CDS-3UTR TCA 90 bp TGCATCTTAGCCTTCCCCATCCCACTTGGTGAGGTGGGCCACCCTAGTCACATTCAAGGCCATTGCTATTaGGGTACGGGGCCCACTTCT +
Preference number: 4 (lower is better)
Translates to: CILAFPIPLGEVGHPSHIQGHCY*GTGPTS
Trigger: AGAAGTGGGCCCCGTACCTCAATAGCAATGGCCTTG...AATGTGACTAGGGTGGCCCACCTCACCAAGTGGGATGGGGAAGGCTAAGATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR TCA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCAAGTCCTCATAGGTGGTaGGGCGGCTCACAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLASPHRW*GGSQGH
Trigger: ATGGCCTTGTGAGCCGCCTCACCACCTATGAGGACT...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR TCA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAAGTCCTCATAGGTGGTaGGGCGGCTCACAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGSPHRW*GGSQGH
Trigger: ATGGCCTTGTGAGCCGCCTCACCACCTATGAGGACT...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR TCA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCAAATGGGCCGGGGGTTTaGCTCTGCACTGCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLANGPGV*LCTAQS
Trigger: ACTCTGAGCAGTGCAGAGTCAAACCCCCGGCCCATT...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR TCA 90 bp GGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGGGAAGAACCGCTCTGTaGTTTTCACAATGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: GVCVNRHWLDRGNTGARLGRTAL*FSQWAG
Trigger: CCCGGCCCATTGTGAAAATCACAGAGCGGTTCTTCC...CAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR TCA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCAGTTCCTTGTGTCGATTaGGGCGCTGCTCCAGGATGC +
Preference number: 4 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLAVPCVD*GAAPGC
Trigger: GCATCCTGGAGCAGCGCCTCAATCGACACAAGGAAC...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR TCA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGTTCCTTGTGTCGATTaGGGCGCTGCTCCAGGATGC +
Preference number: 4 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGVPCVD*GAAPGC
Trigger: GCATCCTGGAGCAGCGCCTCAATCGACACAAGGAAC...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR TCA 90 bp GGTGGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAAGCAGAGCAGCGTACTaGAGTCAAAGCAGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: GGLAVRPGVCVNRHWLDRSRAAY*SQSSSP
Trigger: AGGGGAACTGCTTTGACTTCAGTACGCTGCTCTGCT...TCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000394337.8
CDS-3UTR TCA 90 bp GTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGAGCAGAGCAGCGTACTaGAGTCAAAGCAGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: VCVNRHWLDRGNTGARLRSRAAY*SQSSSP
Trigger: AGGGGAACTGCTTTGACTTCAGTACGCTGCTCTGCT...CCGCAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000394337.8
CDS-3UTR TCA 90 bp AGCTGGGATTCAGTCCTCAAATTCTGGGGCATGCATCTTAGCCTTCCCCATCCCGCGAGCCGTAGCCGTTaGCGCAGTAAGCATCATAGC +
Preference number: 4 (lower is better)
Translates to: SWDSVLKFWGMHLSLPHPASRSR*RSKHHS
Trigger: GCTATGATGCTTACTGCGTCAACGGCTACGGCTCGC...GGGATGGGGAAGGCTAAGATGCATGCCCCAGAATTTGAGGACTGAATCCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS-3UTR TCA 90 bp GGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGTGCTGCTGGAGCTTGTaGAGCGCAAGGCACAAATGG +
Preference number: 4 (lower is better)
Translates to: GVCVNRHWLDRGNTGARLCCWSL*SARHKW
Trigger: CCATTTGTGCCTTGCGCTTCACAAGCTCCAGCAGCA...CAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR TCA 90 bp GACCTGACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGATGCTGCTGGAGCTTGTaGAGCGCAAGGCACAAATGG +
Preference number: 4 (lower is better)
Translates to: DLTFQRREGQEANDRPRGCCWSL*SARHKW
Trigger: CCATTTGTGCCTTGCGCTTCACAAGCTCCAGCAGCA...TCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGTCAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR TCA 90 bp GTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGTCTGCAGAGGTGCTGTaGAGACCTGACATTCCAACG +
Preference number: 4 (lower is better)
Translates to: VCVNRHWLDRGNTGARLRSAEVL*RPDIPT
Trigger: CGTTGGAATGTCAGGTCTTCACAGCACCTCTGCAGA...CCGCAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR GCA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCATGGGCCGGAGGGTTGTaGTCACGAACTTGGGCACTT +
Preference number: 4 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLAWAGGL*SRTWAL
Trigger: AAGTGCCCAAGTTCGTGAGCACAACCCTCCGGCCCA...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR GCA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGATGGGCCGGAGGGTTGTaGTCACGAACTTGGGCACTT +
Preference number: 4 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGWAGGL*SRTWAL
Trigger: AAGTGCCCAAGTTCGTGAGCACAACCCTCCGGCCCA...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR GCA 90 bp GTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGTTCACCTCTTGCTCCTaGTCAAACCTGCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: VCVNRHWLDRGNTGARLRFTSCS*SNLLHR
Trigger: CCTGTGCAGCAGGTTTGAGCAGGAGCAAGAGGTGAA...CCGCAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR GCA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCACAGGGCATCCGGCTTTaGCTTCTCCGCTTCCATGAG +
Preference number: 4 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLAQGIRL*LLRFHE
Trigger: CTCATGGAAGCGGAGAAGGCAAAGCCGGATGCCCTG...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR GCA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGACAGGGCATCCGGCTTTaGCTTCTCCGCTTCCATGAG +
Preference number: 4 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGQGIRL*LLRFHE
Trigger: CTCATGGAAGCGGAGAAGGCAAAGCCGGATGCCCTG...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR GCA 90 bp GTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGTCCACAGGCTTTCGATaGCCAGGAAGTGCTCATCCT +
Preference number: 4 (lower is better)
Translates to: VCVNRHWLDRGNTGARLRSTGFR*PGSAHP
Trigger: AGGATGAGCACTTCCTGGGCATCGAAAGCCTGTGGA...CCGCAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR GCA 90 bp GGTGGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGACGGTCCATCTCAGGTTaGATGGACTTGTACGAGTGC +
Preference number: 4 (lower is better)
Translates to: GGLAVRPGVCVNRHWLDRRSISG*MDLYEC
Trigger: GCACTCGTACAAGTCCATGCAACCTGAGATGGACCG...TCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR GCA 90 bp AGAAGAGAAAGGCTGCTGCTGGAGCTTGTGAAGCGCAAGGCACAAATGGCAAATGGTAGCGCAGCTGGATaGGCTCCTCCGCGACCAGAA +
Preference number: 4 (lower is better)
Translates to: RRERLLLELVKRKAQMANGSAAG*APPRPE
Trigger: TTCTGGTCGCGGAGGAGCGCATCCAGCTGCGCTACC...ATTTGCCATTTGTGCCTTGCGCTTCACAAGCTCCAGCAGCAGCCTTTCTCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR GCA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCAAGCAGCTTCTTGGTGTaGTCCATGGGCTCCACCTCG +
Preference number: 4 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLASSFLV*SMGSTS
Trigger: CGAGGTGGAGCCCATGGAGCACACCAAGAAGCTGCT...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR GCA 90 bp GGTGGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGATTGAGGCGCACCGCCTaGCAGCATGTTAGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: GGLAVRPGVCVNRHWLDRLRRTA*QHVSFS
Trigger: AGAGAAACTAACATGCTGGCAGGCGGTGCGCCTCAA...TCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR GCA 90 bp GGTGGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGATTGTTGATGAGCCGCTaGTTGAAGTCGCTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: GGLAVRPGVCVNRHWLDRLLMSR*LKSLRH
Trigger: GTGCCTCAGCGACTTCAAGCAGCGGCTCATCAACAA...TCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR GCA 90 bp GTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGTCCTGGTACCACTGCTaGTTCTTTTGCAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: VCVNRHWLDRGNTGARLRSWYHC*FFCSSW
Trigger: CCAGGAGCTGCAAAAGAAGCAGCAGTGGTACCAGGA...CCGCAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR GCA 90 bp AGGTGCTGTGAAGACCTGACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACGCTCCAGGATGCGGATaGGGAACATGGCCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: RCCEDLTFQRREGQEANDAPGCG*GTWPES
Trigger: GCTCTCAGGCCATGTTCCGCATCCGCATCCTGGAGC...GTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGTCAGGTCTTCACAGCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GGAGACAAACTGGGCACAGCTGTCCCAGTTGTAGAGCTCGGGGTAGGGCATCAGATTCTGGAGCGTCTCTaGGTGTCTGGAGATGGAATG +
Preference number: 4 (lower is better)
Translates to: GDKLGTAVPVVELGVGHQILERL*VSGDGM
Trigger: CATTCCATCTCCAGACACCCAGAGACGCTCCAGAAT...CTGATGCCCTACCCCGAGCTCTACAACTGGGACAGCTGTGCCCAGTTTGTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564297.5
CDS-3UTR CCA 90 bp GGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGTCAGGACCTCCATTCTaGAGCGTCTCTGGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: GVCVNRHWLDRGNTGARLSGPPF*SVSGCL
Trigger: CAGACACCCAGAGACGCTCCAGAATGGAGGTCCTGA...CAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CCA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCAAGCCGCTTCTTCTCCTaGGCTCTGATCTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLASRFFS*ALISCC
Trigger: GCAGCAGGAGATCAGAGCCCAGGAGAAGAAGCGGCT...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CCA 90 bp TGCATCTTAGCCTTCCCCATCCCACTTGGTGAGGTGGGCCACCCTAGTCACATTTGCTCCACCCACGAGTaGGGCATGTCGAAGCTCTTA +
Preference number: 4 (lower is better)
Translates to: CILAFPIPLGEVGHPSHICSTHE*GMSKLL
Trigger: TAAGAGCTTCGACATGCCCCACTCGTGGGTGGAGCA...AATGTGACTAGGGTGGCCCACCTCACCAAGTGGGATGGGGAAGGCTAAGATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS-3UTR CCA 90 bp GGTGGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGACCATCTCAGGTTGCATaGACTTGTACGAGTGCACGC +
Preference number: 4 (lower is better)
Translates to: GGLAVRPGVCVNRHWLDRPSQVA*TCTSAR
Trigger: GCGTGCACTCGTACAAGTCCATGCAACCTGAGATGG...TCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGGTAGGAGAGGAAGTCTaGGCGTCCTTGATAGTACTC +
Preference number: 4 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGVGEEV*ASLIVL
Trigger: GAGTACTATCAAGGACGCCCAGACTTCCTCTCCTAC...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGTCTTCAGGTGCATCATaGCCTCGTACTGGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGSSGAS*PRTGRA
Trigger: TGCTCTACCAGTACGAGGCCATGATGCACCTGAAGA...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CCA 90 bp GGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCCCAGACCTGATGTCTaGACAGCTTCTCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: GVCVNRHWLDRGNTGARLPRPDV*TASPPS
Trigger: AGAGGGAGGAGAAGCTGTCCAGACATCAGGTCTGGG...CAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CCA 90 bp GGTGGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGATGTCATAGATGGAGATaGTCAGTGTGTGCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: GGLAVRPGVCVNRHWLDRCHRWR*SVCAPP
Trigger: AGGCGGCGCACACACTGACCATCTCCATCTATGACA...TCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGTGTCATAGATGGAGATaGTCAGTGTGTGCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: VCVNRHWLDRGNTGARLRCHRWR*SVCAPP
Trigger: AGGCGGCGCACACACTGACCATCTCCATCTATGACA...CCGCAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGGCTTGGTGTCATAGATaGAGATGGTCAGTGTGTGCG +
Preference number: 4 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGAWCHR*RWSVCA
Trigger: CGCACACACTGACCATCTCCATCTATGACACCAAGC...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGGCATCATGCGCTCCATaGCCTCCCGATATTCCTTGC +
Preference number: 4 (lower is better)
Translates to: GVCVNRHWLDRGNTGARLASCAP*PPDIPC
Trigger: GCAAGGAATATCGGGAGGCCATGGAGCGCATGATGC...CAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GACCTGACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGAGCATCATGCGCTCCATaGCCTCCCGATATTCCTTGC +
Preference number: 4 (lower is better)
Translates to: DLTFQRREGQEANDRPRGASCAP*PPDIPC
Trigger: GCAAGGAATATCGGGAGGCCATGGAGCGCATGATGC...TCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGTCAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GGTGGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGATTCTCAAAGCGGGCCTaGATGAGGTTGGCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: GGLAVRPGVCVNRHWLDRFSKRA*MRLALL
Trigger: CAACAAGGCCAACCTCATCCAGGCCCGCTTTGAGAA...TCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGGTGTCAGCGTCACCTaGTTCTCCTGGTACCACTGC +
Preference number: 4 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGGVSVT*FSWYHC
Trigger: GCAGTGGTACCAGGAGAACCAGGTGACGCTGACACC...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp AGCTGGGATTCAGTCCTCAAATTCTGGGGCATGCATCTTAGCCTTCCCCATCCCGAGCTCCCCCAGGCGTaGGTCCTTGTAGAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: SWDSVLKFWGMHLSLPHPELPQA*VLVELF
Trigger: GAAAAGCTCTACAAGGACCCACGCCTGGGGGAGCTC...GGGATGGGGAAGGCTAAGATGCATGCCCCAGAATTTGAGGACTGAATCCCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CCA 90 bp CCCATTCCACAGATGGGTAAGTGGTATCTGGTAAGAGGAGGAGCTGGGATTCAGTTTCTCTGGCAGCTCTaGCTGAGGCCCCAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: PIPQMGKWYLVRGGAGIQFLWQL*LRPQEG
Trigger: TCCCTCCTGGGGCCTCAGCCAGAGCTGCCAGAGAAA...CTGAATCCCAGCTCCTCCTCTTACCAGATACCACTTACCCATCTGTGGAATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CCA 90 bp CTGACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGAGGAGTTTGCAGATGGCTGTaGGACCATCTGCAGAGGTGC +
Preference number: 4 (lower is better)
Translates to: LTFQRREGQEANDRPRGGVCRWL*DHLQRC
Trigger: GCACCTCTGCAGATGGTCCCACAGCCATCTGCAAAC...TCCTCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR TCA 90 bp GGCCATAAGTCTTATTTAATGCAACAATGCTACCCCATTCCACAGATGGGTAAGGGTGCGAGGGCGGCTTaGGAGGGTCAGGCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: GHKSYLMQQCYPIPQMGKGARAA*EGQAGA
Trigger: TGCCCCTGCCTGACCCTCTCAAGCCGCCCTCGCACC...CTTACCCATCTGTGGAATGGGGTAGCATTGTTGCATTAAATAAGACTTATGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS-3UTR TCA 90 bp CTGACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGAGGAGGTGCTGTGAAGACCTaGCATTCCAACGGAGAGAAG +
Preference number: 4 (lower is better)
Translates to: LTFQRREGQEANDRPRGGGAVKT*HSNGEK
Trigger: CTTCTCTCCGTTGGAATGTCAGGTCTTCACAGCACC...TCCTCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR GCA 90 bp GGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGAAGTTGTCTGCCACCTaGAGCAGGTGTTCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: GVCVNRHWLDRGNTGARLKLSAT*SRCSSL
Trigger: CAAGGAGGAACACCTGCTGCAGGTGGCAGACAACTT...CAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR GCA 90 bp CCCATTCCACAGATGGGTAAGTGGTATCTGGTAAGAGGAGGAGCTGGGATTCAGGCGGGAGAAGTTGTCTaGCACCTGCAGCAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: PIPQMGKWYLVRGGAGIQAGEVV*HLQQVF
Trigger: GAACACCTGCTGCAGGTGGCAGACAACTTCTCCCGC...CTGAATCCCAGCTCCTCCTCTTACCAGATACCACTTACCCATCTGTGGAATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS-3UTR GCA 90 bp CCCATTCCACAGATGGGTAAGTGGTATCTGGTAAGAGGAGGAGCTGGGATTCAGTGGGCCGGAGGGTTGTaGTCACGAACTTGGGCACTT +
Preference number: 4 (lower is better)
Translates to: PIPQMGKWYLVRGGAGIQWAGGL*SRTWAL
Trigger: AAGTGCCCAAGTTCGTGAGCACAACCCTCCGGCCCA...CTGAATCCCAGCTCCTCCTCTTACCAGATACCACTTACCCATCTGTGGAATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS-3UTR GCA 90 bp GGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGTGGGCTCTGATCTCCTaGTGCTTCTTCACCTCTTGC +
Preference number: 4 (lower is better)
Translates to: GVCVNRHWLDRGNTGARLWALIS*CFFTSC
Trigger: GCAAGAGGTGAAGAAGCAGCAGGAGATCAGAGCCCA...CAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR GCA 90 bp ACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGAGGAAGGTGGGCTCTGATCTCCTaGTGCTTCTTCACCTCTTGC +
Preference number: 4 (lower is better)
Translates to: TFQRREGQEANDRPRGGRWALIS*CFFTSC
Trigger: GCAAGAGGTGAAGAAGCAGCAGGAGATCAGAGCCCA...CCTTCCTCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS-3UTR GCA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGATCCTCCCTCTTCAGGTaGATCATGGCCTCGTACTGG +
Preference number: 4 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGSSLFR*IMASYW
Trigger: CCAGTACGAGGCCATGATGCACCTGAAGAGGGAGGA...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR GCA 90 bp CATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGAGGAAGGGCCTCCCGATATTCCTTaGTCTTCTCATTCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: HSNGEKDRKQTTGQGEEGPPDIP*SSHSAW
Trigger: CCAAGCGGAATGAGAAGAGCAAGGAATATCGGGAGG...CCCTTCCTCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR GCA 90 bp CTGACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGAGGACACTGCTGCTTCTTTTaGAGCTCCTGGGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LTFQRREGQEANDRPRGGHCCFF*SSWVSF
Trigger: GAAGGAGACCCAGGAGCTGCAAAAGAAGCAGCAGTG...TCCTCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR GCA 90 bp GGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCACTGCTGCTTCTTTTaGAGCTCCTGGGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: GVCVNRHWLDRGNTGARLHCCFF*SSWVSF
Trigger: GAAGGAGACCCAGGAGCTGCAAAAGAAGCAGCAGTG...CAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR GCA 90 bp AGAAGAGAAAGGCTGCTGCTGGAGCTTGTGAAGCGCAAGGCACAAATGGCAAATTGTCGATTGAGGCGCTaGTCCAGGATGCGGATGCGG +
Preference number: 4 (lower is better)
Translates to: RRERLLLELVKRKAQMANCRLRR*SRMRMR
Trigger: CCGCATCCGCATCCTGGAGCAGCGCCTCAATCGACA...ATTTGCCATTTGTGCCTTGCGCTTCACAAGCTCCAGCAGCAGCCTTTCTCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CCA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCACTGGGTGTCTGGAGATaGAATGTCTCCCTCCGAGGA +
Preference number: 4 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLALGVWR*NVSLRG
Trigger: TCCTCGGAGGGAGACATTCCATCTCCAGACACCCAG...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336825.12
ENST00000394337.8
CDS-3UTR CCA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCAGCGTCTCTGGGTGTCTaGAGATGGAATGTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLAASLGV*RWNVSL
Trigger: GAGGGAGACATTCCATCTCCAGACACCCAGAGACGC...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336825.12
ENST00000394337.8
CDS-3UTR CCA 90 bp GAGCCGATAAGCATGGAGCAGAGCAGCGTACTGAAGTCAAAGCAGTTCCCCTTCGCGTCTCTGGGTGTCTaGAGATGGAATGTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: EPISMEQSSVLKSKQFPFASLGV*RWNVSL
Trigger: GAGGGAGACATTCCATCTCCAGACACCCAGAGACGC...GAAGGGGAACTGCTTTGACTTCAGTACGCTGCTCTGCTCCATGCTTATCGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564297.5
CDS-3UTR CCA 90 bp GGTGGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAATTCTGGAGCGTCTCTaGGTGTCTGGAGATGGAATG +
Preference number: 4 (lower is better)
Translates to: GGLAVRPGVCVNRHWLDRILERL*VSGDGM
Trigger: CATTCCATCTCCAGACACCCAGAGACGCTCCAGAAT...TCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CCA 90 bp GTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGATTCTGGAGCGTCTCTaGGTGTCTGGAGATGGAATG +
Preference number: 4 (lower is better)
Translates to: VCVNRHWLDRGNTGARLRILERL*VSGDGM
Trigger: CATTCCATCTCCAGACACCCAGAGACGCTCCAGAAT...CCGCAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CCA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGATCAGGACCTCCATTCTaGAGCGTCTCTGGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGSGPPF*SVSGCL
Trigger: CAGACACCCAGAGACGCTCCAGAATGGAGGTCCTGA...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CCA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGGCTGAGACAGTGATCTaGATCTCTGACAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGAETVI*ISDSFF
Trigger: GAAGAAGCTGTCAGAGATCCAGATCACTGTCTCAGC...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CCA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGACACAGATGGCTGTACTaGCGGGAGAAGTTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGHRWLY*REKLSA
Trigger: GGCAGACAACTTCTCCCGCCAGTACAGCCATCTGTG...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CCA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCATGCTCCACCCACGAGTaGGGCATGTCGAAGCTCTTA +
Preference number: 4 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLACSTHE*GMSKLL
Trigger: TAAGAGCTTCGACATGCCCCACTCGTGGGTGGAGCA...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CCA 90 bp TGCATCTTAGCCTTCCCCATCCCACTTGGTGAGGTGGGCCACCCTAGTCACATTCCATCTCAGGTTGCATaGACTTGTACGAGTGCACGC +
Preference number: 4 (lower is better)
Translates to: CILAFPIPLGEVGHPSHIPSQVA*TCTSAR
Trigger: GCGTGCACTCGTACAAGTCCATGCAACCTGAGATGG...AATGTGACTAGGGTGGCCCACCTCACCAAGTGGGATGGGGAAGGCTAAGATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGACTCTGTCATTGTCCTaGGTGTCTCCTCCCGCTTCA +
Preference number: 4 (lower is better)
Translates to: GVCVNRHWLDRGNTGARLTLSLS*VSPPAS
Trigger: TGAAGCGGGAGGAGACACCCAGGACAATGACAGAGT...CAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGGTAGGAGAGGAAGTCTaGGCGTCCTTGATAGTACTC +
Preference number: 4 (lower is better)
Translates to: VCVNRHWLDRGNTGARLRVGEEV*ASLIVL
Trigger: GAGTACTATCAAGGACGCCCAGACTTCCTCTCCTAC...CCGCAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGGTAGAGCAGCTTCTTaGTGTGCTCCATGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGGRAAS*CAPWAP
Trigger: TGGAGCCCATGGAGCACACCAAGAAGCTGCTCTACC...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CCA 90 bp GGTGGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGATCTTCAGGTGCATCATaGCCTCGTACTGGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: GGLAVRPGVCVNRHWLDRSSGAS*PRTGRA
Trigger: TGCTCTACCAGTACGAGGCCATGATGCACCTGAAGA...TCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CCA 90 bp GGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGTGTCATAGATGGAGATaGTCAGTGTGTGCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: GVCVNRHWLDRGNTGARLCHRWR*SVCAPP
Trigger: AGGCGGCGCACACACTGACCATCTCCATCTATGACA...CAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGGCTTGGTGTCATAGATaGAGATGGTCAGTGTGTGCG +
Preference number: 4 (lower is better)
Translates to: VCVNRHWLDRGNTGARLRAWCHR*RWSVCA
Trigger: CGCACACACTGACCATCTCCATCTATGACACCAAGC...CCGCAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCATCATGCGCTCCATaGCCTCCCGATATTCCTTGC +
Preference number: 4 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGASCAP*PPDIPC
Trigger: GCAAGGAATATCGGGAGGCCATGGAGCGCATGATGC...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGTTCTCAAAGCGGGCCTaGATGAGGTTGGCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: GVCVNRHWLDRGNTGARLFSKRA*MRLALL
Trigger: CAACAAGGCCAACCTCATCCAGGCCCGCTTTGAGAA...CAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGTTCTTTTGCAGCTCCTaGGTCTCCTTCTCAAAGCGG +
Preference number: 4 (lower is better)
Translates to: VCVNRHWLDRGNTGARLRFFCSS*VSFSKR
Trigger: CCGCTTTGAGAAGGAGACCCAGGAGCTGCAAAAGAA...CCGCAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGGTCACCTGGTTCTCCTaGTACCACTGCTGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: VCVNRHWLDRGNTGARLRVTWFS*YHCCFF
Trigger: AAAGAAGCAGCAGTGGTACCAGGAGAACCAGGTGAC...CCGCAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GGTGGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGTCACCTGGTTCTCCTaGTACCACTGCTGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: GGLAVRPGVCVNRHWLDRVTWFS*YHCCFF
Trigger: AAAGAAGCAGCAGTGGTACCAGGAGAACCAGGTGAC...TCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp CCCATTCCACAGATGGGTAAGTGGTATCTGGTAAGAGGAGGAGCTGGGATTCAGGGTGTCAGCGTCACCTaGTTCTCCTGGTACCACTGC +
Preference number: 4 (lower is better)
Translates to: PIPQMGKWYLVRGGAGIQGVSVT*FSWYHC
Trigger: GCAGTGGTACCAGGAGAACCAGGTGACGCTGACACC...CTGAATCCCAGCTCCTCCTCTTACCAGATACCACTTACCCATCTGTGGAATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGTGCGGATGCGGAACATaGCCTGAGAGCAGTAACTCA +
Preference number: 4 (lower is better)
Translates to: GVCVNRHWLDRGNTGARLCGCGT*PESSNS
Trigger: TGAGTTACTGCTCTCAGGCCATGTTCCGCATCCGCA...CAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp TGCATCTTAGCCTTCCCCATCCCACTTGGTGAGGTGGGCCACCCTAGTCACATTTGCGGATGCGGAACATaGCCTGAGAGCAGTAACTCA +
Preference number: 4 (lower is better)
Translates to: CILAFPIPLGEVGHPSHICGCGT*PESSNS
Trigger: TGAGTTACTGCTCTCAGGCCATGTTCCGCATCCGCA...AATGTGACTAGGGTGGCCCACCTCACCAAGTGGGATGGGGAAGGCTAAGATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGACAAGCGAATATTTTCTaGAGCTCCCCCAGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGQANIF*SSPRRG
Trigger: CCCACGCCTGGGGGAGCTCCAGAAAATATTCGCTTG...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp AGCTGGGATTCAGTCCTCAAATTCTGGGGCATGCATCTTAGCCTTCCCCATCCCCAAGCGAATATTTTCTaGAGCTCCCCCAGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: SWDSVLKFWGMHLSLPHPQANIF*SSPRRG
Trigger: CCCACGCCTGGGGGAGCTCCAGAAAATATTCGCTTG...GGGATGGGGAAGGCTAAGATGCATGCCCCAGAATTTGAGGACTGAATCCCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CCA 90 bp CATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGAGGAAGGGGCGTCTCTGGGTGTCTaGAGATGGAATGTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: HSNGEKDRKQTTGQGEEGASLGV*RWNVSK
Trigger: TTTGGAGACATTCCATCTCCAGACACCCAGAGACGC...CCCTTCCTCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS-3UTR CCA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGATCCCACTTGGTGAGGTaGGCCACCCTAGTCACATTG +
Preference number: 4 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGSHLVR*ATLVTL
Trigger: CAATGTGACTAGGGTGGCCCACCTCACCAAGTGGGA...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR TCA 90 bp CCCATTCCACAGATGGGTAAGTGGTATCTGGTAAGAGGAGGAGCTGGGATTCAGGGAAGAACCGCTCTGTaGTTTTCACAATGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: PIPQMGKWYLVRGGAGIQGRTAL*FSQWAG
Trigger: CCCGGCCCATTGTGAAAATCACAGAGCGGTTCTTCC...CTGAATCCCAGCTCCTCCTCTTACCAGATACCACTTACCCATCTGTGGAATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR TCA 90 bp GAGCCGATAAGCATGGAGCAGAGCAGCGTACTGAAGTCAAAGCAGTTCCCCTTCAGCAGAGCAGCGTACTaGAGTCAAAGCAGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: EPISMEQSSVLKSKQFPFSRAAY*SQSSSP
Trigger: AGGGGAACTGCTTTGACTTCAGTACGCTGCTCTGCT...GAAGGGGAACTGCTTTGACTTCAGTACGCTGCTCTGCTCCATGCTTATCGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564297.5
CDS-3UTR TCA 90 bp AGCTGGGATTCAGTCCTCAAATTCTGGGGCATGCATCTTAGCCTTCCCCATCCCGGTGCTGTGAAGACCTaGCATTCCAACGGAGAGAAG +
Preference number: 4 (lower is better)
Translates to: SWDSVLKFWGMHLSLPHPGAVKT*HSNGEK
Trigger: CTTCTCTCCGTTGGAATGTCAGGTCTTCACAGCACC...GGGATGGGGAAGGCTAAGATGCATGCCCCAGAATTTGAGGACTGAATCCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR GCA 90 bp GGTGGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGATCTCTGAGCGTCTCCTaGTTTAAGGTGATTTCCTCC +
Preference number: 4 (lower is better)
Translates to: GGLAVRPGVCVNRHWLDRSLSVS*FKVISS
Trigger: GGAGGAAATCACCTTAAAGCAGGAGACGCTCAGAGA...TCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR GCA 90 bp GTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGTCTCTGAGCGTCTCCTaGTTTAAGGTGATTTCCTCC +
Preference number: 4 (lower is better)
Translates to: VCVNRHWLDRGNTGARLRSLSVS*FKVISS
Trigger: GGAGGAAATCACCTTAAAGCAGGAGACGCTCAGAGA...CCGCAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR GCA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCATTCACCTCTTGCTCCTaGTCAAACCTGCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLAFTSCS*SNLLHR
Trigger: CCTGTGCAGCAGGTTTGAGCAGGAGCAAGAGGTGAA...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR GCA 90 bp GGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGTGCTTCTTCACCTCTTaGTCCTGCTCAAACCTGCTG +
Preference number: 4 (lower is better)
Translates to: GVCVNRHWLDRGNTGARLCFFTS*SCSNLL
Trigger: CAGCAGGTTTGAGCAGGAGCAAGAGGTGAAGAAGCA...CAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR GCA 90 bp ACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGAGGAAGGTGCTTCTTCACCTCTTaGTCCTGCTCAAACCTGCTG +
Preference number: 4 (lower is better)
Translates to: TFQRREGQEANDRPRGGRCFFTS*SCSNLL
Trigger: CAGCAGGTTTGAGCAGGAGCAAGAGGTGAAGAAGCA...CCTTCCTCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS-3UTR GCA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCATCCACAGGCTTTCGATaGCCAGGAAGTGCTCATCCT +
Preference number: 4 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLASTGFR*PGSAHP
Trigger: AGGATGAGCACTTCCTGGGCATCGAAAGCCTGTGGA...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR GCA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGACGGTCCATCTCAGGTTaGATGGACTTGTACGAGTGC +
Preference number: 4 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGRSISG*MDLYEC
Trigger: GCACTCGTACAAGTCCATGCAACCTGAGATGGACCG...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR GCA 90 bp AGCTGGGATTCAGTCCTCAAATTCTGGGGCATGCATCTTAGCCTTCCCCATCCCCGGTCCATCTCAGGTTaGATGGACTTGTACGAGTGC +
Preference number: 4 (lower is better)
Translates to: SWDSVLKFWGMHLSLPHPRSISG*MDLYEC
Trigger: GCACTCGTACAAGTCCATGCAACCTGAGATGGACCG...GGGATGGGGAAGGCTAAGATGCATGCCCCAGAATTTGAGGACTGAATCCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR GCA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCATTGAGGCGCACCGCCTaGCAGCATGTTAGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLALRRTA*QHVSFS
Trigger: AGAGAAACTAACATGCTGGCAGGCGGTGCGCCTCAA...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR GCA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCATTGTTGATGAGCCGCTaGTTGAAGTCGCTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLALLMSR*LKSLRH
Trigger: GTGCCTCAGCGACTTCAAGCAGCGGCTCATCAACAA...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR GCA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCACACTGCTGCTTCTTTTaGAGCTCCTGGGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLAHCCFF*SSWVSF
Trigger: GAAGGAGACCCAGGAGCTGCAAAAGAAGCAGCAGTG...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR GCA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGATCCTGGTACCACTGCTaGTTCTTTTGCAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGSWYHC*FFCSSW
Trigger: CCAGGAGCTGCAAAAGAAGCAGCAGTGGTACCAGGA...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR GCA 90 bp GGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGTTCTCCTGGTACCACTaGTGCTTCTTTTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GVCVNRHWLDRGNTGARLFSWYH*CFFCSS
Trigger: GGAGCTGCAAAAGAAGCAGCAGTGGTACCAGGAGAA...CAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR GCA 90 bp GACCTGACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGATTCTCCTGGTACCACTaGTGCTTCTTTTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: DLTFQRREGQEANDRPRGFSWYH*CFFCSS
Trigger: GGAGCTGCAAAAGAAGCAGCAGTGGTACCAGGAGAA...TCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGTCAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GGTGGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGACTTCCGCACCTCAACTaGCCTCATCATTTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: GGLAVRPGVCVNRHWLDRLPHLN*PHHFLH
Trigger: ATGGAGAAAATGATGAGGCCAGTTGAGGTGCGGAAG...TCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CCA 90 bp GACAAACTGGGCACAGCTGTCCCAGTTGTAGAGCTCGGGGTAGGGCATCAGTGTCTTCCGCACCTCAACTaGCCTCATCATTTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: DKLGTAVPVVELGVGHQCLPHLN*PHHFLH
Trigger: ATGGAGAAAATGATGAGGCCAGTTGAGGTGCGGAAG...ACACTGATGCCCTACCCCGAGCTCTACAACTGGGACAGCTGTGCCCAGTTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564297.5
CDS-3UTR CCA 90 bp GTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGTTGTGCTCACGAACTTaGGCACTTCACACTCGTTCA +
Preference number: 4 (lower is better)
Translates to: VCVNRHWLDRGNTGARLRLCSRT*ALHTRS
Trigger: TGAACGAGTGTGAAGTGCCCAAGTTCGTGAGCACAA...CCGCAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CCA 90 bp GGTGGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAATGTCTTCCCGGTTCTaGTACCACTCCTTTATCTCC +
Preference number: 4 (lower is better)
Translates to: GGLAVRPGVCVNRHWLDRMSSRF*YHSFIS
Trigger: GGAGATAAAGGAGTGGTACCAGAACCGGGAAGACAT...TCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCACCATCTCAGGTTGCATaGACTTGTACGAGTGCACGC +
Preference number: 4 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLAPSQVA*TCTSAR
Trigger: GCGTGCACTCGTACAAGTCCATGCAACCTGAGATGG...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAACTCTGTCATTGTCCTaGGTGTCTCCTCCCGCTTCA +
Preference number: 4 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGTLSLS*VSPPAS
Trigger: TGAAGCGGGAGGAGACACCCAGGACAATGACAGAGT...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp AGGTGCTGTGAAGACCTGACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACGGTAGAGCAGCTTCTTaGTGTGCTCCATGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: RCCEDLTFQRREGQEANDGRAAS*CAPWAP
Trigger: TGGAGCCCATGGAGCACACCAAGAAGCTGCTCTACC...GTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGTCAGGTCTTCACAGCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS-3UTR CCA 90 bp AGGTGCTGTGAAGACCTGACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACCCCAGACCTGATGTCTaGACAGCTTCTCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: RCCEDLTFQRREGQEANDPRPDV*TASPPS
Trigger: AGAGGGAGGAGAAGCTGTCCAGACATCAGGTCTGGG...GTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGTCAGGTCTTCACAGCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS-3UTR CCA 90 bp GGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGGCTTGGTGTCATAGATaGAGATGGTCAGTGTGTGCG +
Preference number: 4 (lower is better)
Translates to: GVCVNRHWLDRGNTGARLAWCHR*RWSVCA
Trigger: CGCACACACTGACCATCTCCATCTATGACACCAAGC...CAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGTCTTCTCATTCCGCTTaGTGTCATAGATGGAGATGG +
Preference number: 4 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGSSHSA*CHRWRW
Trigger: CCATCTCCATCTATGACACCAAGCGGAATGAGAAGA...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GGCCATAAGTCTTATTTAATGCAACAATGCTACCCCATTCCACAGATGGGTAAGTCTCCTGGCGGGAGCTaGGCCAGGAATGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GHKSYLMQQCYPIPQMGKSPGGS*ARNGAR
Trigger: CCTGGCCCCATTCCTGGCCCAGCTCCCGCCAGGAGA...CTTACCCATCTGTGGAATGGGGTAGCATTGTTGCATTAAATAAGACTTATGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CCA 90 bp AGCTGGGATTCAGTCCTCAAATTCTGGGGCATGCATCTTAGCCTTCCCCATCCCTTCTCAAAGCGGGCCTaGATGAGGTTGGCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: SWDSVLKFWGMHLSLPHPFSKRA*MRLALL
Trigger: CAACAAGGCCAACCTCATCCAGGCCCGCTTTGAGAA...GGGATGGGGAAGGCTAAGATGCATGCCCCAGAATTTGAGGACTGAATCCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CCA 90 bp CTGACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGAGGAGTCACCTGGTTCTCCTaGTACCACTGCTGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LTFQRREGQEANDRPRGGVTWFS*YHCCFF
Trigger: AAAGAAGCAGCAGTGGTACCAGGAGAACCAGGTGAC...TCCTCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CCA 90 bp AGAAGAGAAAGGCTGCTGCTGGAGCTTGTGAAGCGCAAGGCACAAATGGCAAATGGTGTCAGCGTCACCTaGTTCTCCTGGTACCACTGC +
Preference number: 4 (lower is better)
Translates to: RRERLLLELVKRKAQMANGVSVT*FSWYHC
Trigger: GCAGTGGTACCAGGAGAACCAGGTGACGCTGACACC...ATTTGCCATTTGTGCCTTGCGCTTCACAAGCTCCAGCAGCAGCCTTTCTCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGATGCGGATGCGGAACATaGCCTGAGAGCAGTAACTCA +
Preference number: 4 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGCGCGT*PESSNS
Trigger: TGAGTTACTGCTCTCAGGCCATGTTCCGCATCCGCA...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp AGAAGAGAAAGGCTGCTGCTGGAGCTTGTGAAGCGCAAGGCACAAATGGCAAATGAGCTCCCCCAGGCGTaGGTCCTTGTAGAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: RRERLLLELVKRKAQMANELPQA*VLVELF
Trigger: GAAAAGCTCTACAAGGACCCACGCCTGGGGGAGCTC...ATTTGCCATTTGTGCCTTGCGCTTCACAAGCTCCAGCAGCAGCCTTTCTCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CCA 90 bp AAGAGAAAGGCTGCTGCTGGAGCTTGTGAAGCGCAAGGCACAAATGGCAAATTATTTCTCTGGCAGCTCTaGCTGAGGCCCCAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: KRKAAAGACEAQGTNGKLFLWQL*LRPQEG
Trigger: TCCCTCCTGGGGCCTCAGCCAGAGCTGCCAGAGAAA...TAATTTGCCATTTGTGCCTTGCGCTTCACAAGCTCCAGCAGCAGCCTTTCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CCA 90 bp CTGACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGAGGAAAGCAGTTCCCCTTCTaGTACTTGAGCACAGTGGTC +
Preference number: 4 (lower is better)
Translates to: LTFQRREGQEANDRPRGGKQFPF*YLSTVV
Trigger: GACCACTGTGCTCAAGTACCAGAAGGGGAACTGCTT...TCCTCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS-3UTR CCA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGACCAGTTGTTTGCAGATaGCTGTGGGACCATCTGCAG +
Preference number: 4 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGPVVCR*LWDHLQ
Trigger: CTGCAGATGGTCCCACAGCCATCTGCAAACAACTGG...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CCA 90 bp CCCATTCCACAGATGGGTAAGTGGTATCTGGTAAGAGGAGGAGCTGGGATTCAGTCCCACTTGGTGAGGTaGGCCACCCTAGTCACATTG +
Preference number: 4 (lower is better)
Translates to: PIPQMGKWYLVRGGAGIQSHLVR*ATLVTL
Trigger: CAATGTGACTAGGGTGGCCCACCTCACCAAGTGGGA...CTGAATCCCAGCTCCTCCTCTTACCAGATACCACTTACCCATCTGTGGAATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR TCA 90 bp GGTGGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAAGCAATCCTGCATGTTaGTCCAGTAGTTCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: GGLAVRPGVCVNRHWLDRSNPAC*SSSSCG
Trigger: ACCACAAGAACTACTGGATCAACATGCAGGATTGCT...TCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR TCA 90 bp AGAAGAGAAAGGCTGCTGCTGGAGCTTGTGAAGCGCAAGGCACAAATGGCAAATCAAGGCCATTGCTATTaGGGTACGGGGCCCACTTCT +
Preference number: 4 (lower is better)
Translates to: RRERLLLELVKRKAQMANQGHCY*GTGPTS
Trigger: AGAAGTGGGCCCCGTACCTCAATAGCAATGGCCTTG...ATTTGCCATTTGTGCCTTGCGCTTCACAAGCTCCAGCAGCAGCCTTTCTCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR TCA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCACCTTTTCCTCCTTCTTaGTGGTCTCCTTGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLAPFPPS*WSPWAS
Trigger: TGAAGCCCAAGGAGACCATCAAGAAGGAGGAAAAGG...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000394337.8
CDS-3UTR TCA 90 bp CCCATTCCACAGATGGGTAAGTGGTATCTGGTAAGAGGAGGAGCTGGGATTCAGTCTGCAGAGGTGCTGTaGAGACCTGACATTCCAACG +
Preference number: 4 (lower is better)
Translates to: PIPQMGKWYLVRGGAGIQSAEVL*RPDIPT
Trigger: CGTTGGAATGTCAGGTCTTCACAGCACCTCTGCAGA...CTGAATCCCAGCTCCTCCTCTTACCAGATACCACTTACCCATCTGTGGAATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR GCA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCATGCTTCTTCACCTCTTaGTCCTGCTCAAACCTGCTG +
Preference number: 4 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLACFFTS*SCSNLL
Trigger: CAGCAGGTTTGAGCAGGAGCAAGAGGTGAAGAAGCA...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR GCA 90 bp GTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGCAAAGATCAAGTCCTTaGAGCAGTTCCAGCAATCCT +
Preference number: 4 (lower is better)
Translates to: VCVNRHWLDRGNTGARLRQRSSP*SSSSNP
Trigger: AGGATTGCTGGAACTGCTGCAAGGACTTGATCTTTG...CCGCAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR GCA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCACCTCCCGATATTCCTTaGTCTTCTCATTCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLAPPDIP*SSHSAW
Trigger: CCAAGCGGAATGAGAAGAGCAAGGAATATCGGGAGG...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR GCA 90 bp CCCATTCCACAGATGGGTAAGTGGTATCTGGTAAGAGGAGGAGCTGGGATTCAGTTGAGGCGCACCGCCTaGCAGCATGTTAGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: PIPQMGKWYLVRGGAGIQLRRTA*QHVSFS
Trigger: AGAGAAACTAACATGCTGGCAGGCGGTGCGCCTCAA...CTGAATCCCAGCTCCTCCTCTTACCAGATACCACTTACCCATCTGTGGAATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR GCA 90 bp CCCATTCCACAGATGGGTAAGTGGTATCTGGTAAGAGGAGGAGCTGGGATTCAGTTGTTGATGAGCCGCTaGTTGAAGTCGCTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: PIPQMGKWYLVRGGAGIQLLMSR*LKSLRH
Trigger: GTGCCTCAGCGACTTCAAGCAGCGGCTCATCAACAA...CTGAATCCCAGCTCCTCCTCTTACCAGATACCACTTACCCATCTGTGGAATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR GCA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCATTCTCCTGGTACCACTaGTGCTTCTTTTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLAFSWYH*CFFCSS
Trigger: GGAGCTGCAAAAGAAGCAGCAGTGGTACCAGGAGAA...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR GCA 90 bp AAGAGAAAGGCTGCTGCTGGAGCTTGTGAAGCGCAAGGCACAAATGGCAAATTAGGCTGTGGGACCATCTaGAGAGGTGCTGTGAAGACC +
Preference number: 4 (lower is better)
Translates to: KRKAAAGACEAQGTNGKLGCGTI*RGAVKT
Trigger: GGTCTTCACAGCACCTCTGCAGATGGTCCCACAGCC...TAATTTGCCATTTGTGCCTTGCGCTTCACAAGCTCCAGCAGCAGCCTTTCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR GCA 90 bp GACCTGACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGATCAAATTCTGGGGCATaGATCTTAGCCTTCCCCATC +
Preference number: 4 (lower is better)
Translates to: DLTFQRREGQEANDRPRGSNSGA*ILAFPI
Trigger: GATGGGGAAGGCTAAGATGCATGCCCCAGAATTTGA...TCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGTCAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CCA 90 bp TGCATCTTAGCCTTCCCCATCCCACTTGGTGAGGTGGGCCACCCTAGTCACATTCCTCCTTGGGTGTGTTaGTTTTGTAGGAAATGGGCA +
Preference number: 4 (lower is better)
Translates to: CILAFPIPLGEVGHPSHIPPWVC*FCRKWA
Trigger: TGCCCATTTCCTACAAAACCAACACACCCAAGGAGG...AATGTGACTAGGGTGGCCCACCTCACCAAGTGGGATGGGGAAGGCTAAGATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS-3UTR CCA 90 bp AGAAGAGAAAGGCTGCTGCTGGAGCTTGTGAAGCGCAAGGCACAAATGGCAAATCACAGATGGCTGTACTaGCGGGAGAAGTTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: RRERLLLELVKRKAQMANHRWLY*REKLSA
Trigger: GGCAGACAACTTCTCCCGCCAGTACAGCCATCTGTG...ATTTGCCATTTGTGCCTTGCGCTTCACAAGCTCCAGCAGCAGCCTTTCTCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS-3UTR CCA 90 bp TGCATCTTAGCCTTCCCCATCCCACTTGGTGAGGTGGGCCACCCTAGTCACATTATGTCTTCCCGGTTCTaGTACCACTCCTTTATCTCC +
Preference number: 4 (lower is better)
Translates to: CILAFPIPLGEVGHPSHIMSSRF*YHSFIS
Trigger: GGAGATAAAGGAGTGGTACCAGAACCGGGAAGACAT...AATGTGACTAGGGTGGCCCACCTCACCAAGTGGGATGGGGAAGGCTAAGATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CCA 90 bp CTGACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGAGGAATGTCTTCCCGGTTCTaGTACCACTCCTTTATCTCC +
Preference number: 4 (lower is better)
Translates to: LTFQRREGQEANDRPRGGMSSRF*YHSFIS
Trigger: GGAGATAAAGGAGTGGTACCAGAACCGGGAAGACAT...TCCTCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GGCCATAAGTCTTATTTAATGCAACAATGCTACCCCATTCCACAGATGGGTAAGTGCACGCGCAGAGCCTaGGGGTGGCCAGGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: GHKSYLMQQCYPIPQMGKCTRRA*GWPGLK
Trigger: CTTCAAGCCTGGCCACCCCCAGGCTCTGCGCGTGCA...CTTACCCATCTGTGGAATGGGGTAGCATTGTTGCATTAAATAAGACTTATGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGTAGGAGAGGAAGTCTaGGCGTCCTTGATAGTACTC +
Preference number: 4 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGVGEEV*ASLIVL
Trigger: GAGTACTATCAAGGACGCCCAGACTTCCTCTCCTAC...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCAGTAGGAGAGGAAGTCTaGGCGTCCTTGATAGTACTC +
Preference number: 4 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLAVGEEV*ASLIVL
Trigger: GAGTACTATCAAGGACGCCCAGACTTCCTCTCCTAC...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCAGCTTGGTGTCATAGATaGAGATGGTCAGTGTGTGCG +
Preference number: 4 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLAAWCHR*RWSVCA
Trigger: CGCACACACTGACCATCTCCATCTATGACACCAAGC...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GGTGGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGATCTTCTCATTCCGCTTaGTGTCATAGATGGAGATGG +
Preference number: 4 (lower is better)
Translates to: GGLAVRPGVCVNRHWLDRSSHSA*CHRWRW
Trigger: CCATCTCCATCTATGACACCAAGCGGAATGAGAAGA...TCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCATTCTTTTGCAGCTCCTaGGTCTCCTTCTCAAAGCGG +
Preference number: 4 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLAFFCSS*VSFSKR
Trigger: CCGCTTTGAGAAGGAGACCCAGGAGCTGCAAAAGAA...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGTCACCTGGTTCTCCTaGTACCACTGCTGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGVTWFS*YHCCFF
Trigger: AAAGAAGCAGCAGTGGTACCAGGAGAACCAGGTGAC...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp AGGTGCTGTGAAGACCTGACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACTGCGGATGCGGAACATaGCCTGAGAGCAGTAACTCA +
Preference number: 4 (lower is better)
Translates to: RCCEDLTFQRREGQEANDCGCGT*PESSNS
Trigger: TGAGTTACTGCTCTCAGGCCATGTTCCGCATCCGCA...GTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGTCAGGTCTTCACAGCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CCA 90 bp AGAAGAGAAAGGCTGCTGCTGGAGCTTGTGAAGCGCAAGGCACAAATGGCAAATCAAGCGAATATTTTCTaGAGCTCCCCCAGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: RRERLLLELVKRKAQMANQANIF*SSPRRG
Trigger: CCCACGCCTGGGGGAGCTCCAGAAAATATTCGCTTG...ATTTGCCATTTGTGCCTTGCGCTTCACAAGCTCCAGCAGCAGCCTTTCTCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CCA 90 bp AAGAGAAAGGCTGCTGCTGGAGCTTGTGAAGCGCAAGGCACAAATGGCAAATTAGAGGTTTCCTTTCTCTaGCAGCTCTGGCTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: KRKAAAGACEAQGTNGKLEVSFL*QLWLRP
Trigger: GGGCCTCAGCCAGAGCTGCCAGAGAAAGGAAACCTC...TAATTTGCCATTTGTGCCTTGCGCTTCACAAGCTCCAGCAGCAGCCTTTCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGTGTGTAAACAGGCATTaGCTGGATAGAGGGAACACA +
Preference number: 4 (lower is better)
Translates to: VCVNRHWLDRGNTGARLRCVNRH*LDRGNT
Trigger: TGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACA...CCGCAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp CATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGAGGAAGGGTGTGTAAACAGGCATTaGCTGGATAGAGGGAACACA +
Preference number: 4 (lower is better)
Translates to: HSNGEKDRKQTTGQGEEGCVNRH*LDRGNT
Trigger: TGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACA...CCCTTCCTCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CCA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCAAAGCAGTTCCCCTTCTaGTACTTGAGCACAGTGGTC +
Preference number: 4 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLAKQFPF*YLSTVV
Trigger: GACCACTGTGCTCAAGTACCAGAAGGGGAACTGCTT...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CCA 90 bp AGAAGAGAAAGGCTGCTGCTGGAGCTTGTGAAGCGCAAGGCACAAATGGCAAATAGGGGAGGAAGGGGGTaGTCCCAGGCTATAGATAAC +
Preference number: 4 (lower is better)
Translates to: RRERLLLELVKRKAQMANRGGRG*SQAIDN
Trigger: GTTATCTATAGCCTGGGACCACCCCCTTCCTCCCCT...ATTTGCCATTTGTGCCTTGCGCTTCACAAGCTCCAGCAGCAGCCTTTCTCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CCA 90 bp AGAAGAGAAAGGCTGCTGCTGGAGCTTGTGAAGCGCAAGGCACAAATGGCAAATGTTTGCAGATGGCTGTaGGACCATCTGCAGAGGTGC +
Preference number: 4 (lower is better)
Translates to: RRERLLLELVKRKAQMANVCRWL*DHLQRC
Trigger: GCACCTCTGCAGATGGTCCCACAGCCATCTGCAAAC...ATTTGCCATTTGTGCCTTGCGCTTCACAAGCTCCAGCAGCAGCCTTTCTCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GGTGGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGATCAGTCCTCAAATTCTaGGGCATGCATCTTAGCCTT +
Preference number: 4 (lower is better)
Translates to: GGLAVRPGVCVNRHWLDRSVLKF*GMHLSL
Trigger: AAGGCTAAGATGCATGCCCCAGAATTTGAGGACTGA...TCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR TCA 90 bp GGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGAGCAATCCTGCATGTTaGTCCAGTAGTTCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: GVCVNRHWLDRGNTGARLSNPAC*SSSSCG
Trigger: ACCACAAGAACTACTGGATCAACATGCAGGATTGCT...CAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR TCA 90 bp CATAAGTCTTATTTAATGCAACAATGCTACCCCATTCCACAGATGGGTAAGTGGCGCGCTTGGAGGCCGTaGTGTGGTCCTCACGGCAGT +
Preference number: 4 (lower is better)
Translates to: HKSYLMQQCYPIPQMGKWRAWRP*CGPHGS
Trigger: ACTGCCGTGAGGACCACATCACGGCCTCCAAGCGCG...CCACTTACCCATCTGTGGAATGGGGTAGCATTGTTGCATTAAATAAGACTTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR TCA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGTTTACAGGAAAATCATaGGAAGCAGGAACAAACAGG +
Preference number: 4 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGFTGKS*EAGTNR
Trigger: CCTGTTTGTTCCTGCTTCTCATGATTTTCCTGTAAA...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR GCA 90 bp CATAAGTCTTATTTAATGCAACAATGCTACCCCATTCCACAGATGGGTAAGTGGCACTCGTTCAGGGGGTaGAGGAAGAGGGGCACGCGG +
Preference number: 4 (lower is better)
Translates to: HKSYLMQQCYPIPQMGKWHSFRG*RKRGTR
Trigger: CCGCGTGCCCCTCTTCCTGCACCCCCTGAACGAGTG...CCACTTACCCATCTGTGGAATGGGGTAGCATTGTTGCATTAAATAAGACTTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS-3UTR GCA 90 bp TGCATCTTAGCCTTCCCCATCCCACTTGGTGAGGTGGGCCACCCTAGTCACATTCAAAGATCAAGTCCTTaGAGCAGTTCCAGCAATCCT +
Preference number: 4 (lower is better)
Translates to: CILAFPIPLGEVGHPSHIQRSSP*SSSSNP
Trigger: AGGATTGCTGGAACTGCTGCAAGGACTTGATCTTTG...AATGTGACTAGGGTGGCCCACCTCACCAAGTGGGATGGGGAAGGCTAAGATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS-3UTR GCA 90 bp GGTGGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGATATCCTCATCCTCCTTaGCCAGATTTTCCACATCAT +
Preference number: 4 (lower is better)
Translates to: GGLAVRPGVCVNRHWLDRYPHPP*PDFPHH
Trigger: ATGATGTGGAAAATCTGGGCAAGGAGGATGAGGATA...TCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR GCA 90 bp CATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGAGGAAGGGTATCCTCATCCTCCTTaGCCAGATTTTCCACATCAT +
Preference number: 4 (lower is better)
Translates to: HSNGEKDRKQTTGQGEEGYPHPP*PDFPHH
Trigger: ATGATGTGGAAAATCTGGGCAAGGAGGATGAGGATA...CCCTTCCTCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS-3UTR GCA 90 bp AGAAGAGAAAGGCTGCTGCTGGAGCTTGTGAAGCGCAAGGCACAAATGGCAAATCGGTCCATCTCAGGTTaGATGGACTTGTACGAGTGC +
Preference number: 4 (lower is better)
Translates to: RRERLLLELVKRKAQMANRSISG*MDLYEC
Trigger: GCACTCGTACAAGTCCATGCAACCTGAGATGGACCG...ATTTGCCATTTGTGCCTTGCGCTTCACAAGCTCCAGCAGCAGCCTTTCTCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR GCA 90 bp AAGAGAAAGGCTGCTGCTGGAGCTTGTGAAGCGCAAGGCACAAATGGCAAATTATCCTCCCTCTTCAGGTaGATCATGGCCTCGTACTGG +
Preference number: 4 (lower is better)
Translates to: KRKAAAGACEAQGTNGKLSSLFR*IMASYW
Trigger: CCAGTACGAGGCCATGATGCACCTGAAGAGGGAGGA...TAATTTGCCATTTGTGCCTTGCGCTTCACAAGCTCCAGCAGCAGCCTTTCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS-3UTR CCA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCACTTCCGCACCTCAACTaGCCTCATCATTTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLALPHLN*PHHFLH
Trigger: ATGGAGAAAATGATGAGGCCAGTTGAGGTGCGGAAG...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CCA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCTGAGACAGTGATCTaGATCTCTGACAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGAETVI*ISDSFF
Trigger: GAAGAAGCTGTCAGAGATCCAGATCACTGTCTCAGC...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CCA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCAGCTGAGACAGTGATCTaGATCTCTGACAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLAAETVI*ISDSFF
Trigger: GAAGAAGCTGTCAGAGATCCAGATCACTGTCTCAGC...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CCA 90 bp GTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGTGGTTTTGTAGGAAATaGGCAGCTTGGAGATGTCAA +
Preference number: 4 (lower is better)
Translates to: VCVNRHWLDRGNTGARLRWFCRK*AAWRCQ
Trigger: TTGACATCTCCAAGCTGCCCATTTCCTACAAAACCA...CCGCAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CCA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGACCTCCTTGGGTGTGTTaGTTTTGTAGGAAATGGGCA +
Preference number: 4 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGPPWVC*FCRKWA
Trigger: TGCCCATTTCCTACAAAACCAACACACCCAAGGAGG...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CCA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCATTGTGCTCACGAACTTaGGCACTTCACACTCGTTCA +
Preference number: 4 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLALCSRT*ALHTRS
Trigger: TGAACGAGTGTGAAGTGCCCAAGTTCGTGAGCACAA...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CCA 90 bp ACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGAGGAAGGGCTATGTCCTGTGAATaGGTCGATGAAGAAGTTCTC +
Preference number: 4 (lower is better)
Translates to: TFQRREGQEANDRPRGGRAMSCE*VDEEVL
Trigger: GAGAACTTCTTCATCGACCCATTCACAGGACATAGC...CCTTCCTCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS-3UTR CCA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCAATGTCTTCCCGGTTCTaGTACCACTCCTTTATCTCC +
Preference number: 4 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLAMSSRF*YHSFIS
Trigger: GGAGATAAAGGAGTGGTACCAGAACCGGGAAGACAT...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp AGAAGAGAAAGGCTGCTGCTGGAGCTTGTGAAGCGCAAGGCACAAATGGCAAATTGTCATAGATGGAGATaGTCAGTGTGTGCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: RRERLLLELVKRKAQMANCHRWR*SVCAPP
Trigger: AGGCGGCGCACACACTGACCATCTCCATCTATGACA...ATTTGCCATTTGTGCCTTGCGCTTCACAAGCTCCAGCAGCAGCCTTTCTCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GACCTGACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGATCTTCTCATTCCGCTTaGTGTCATAGATGGAGATGG +
Preference number: 4 (lower is better)
Translates to: DLTFQRREGQEANDRPRGSSHSA*CHRWRW
Trigger: CCATCTCCATCTATGACACCAAGCGGAATGAGAAGA...TCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGTCAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CCA 90 bp TGCATCTTAGCCTTCCCCATCCCACTTGGTGAGGTGGGCCACCCTAGTCACATTTCTTCTCATTCCGCTTaGTGTCATAGATGGAGATGG +
Preference number: 4 (lower is better)
Translates to: CILAFPIPLGEVGHPSHISSHSA*CHRWRW
Trigger: CCATCTCCATCTATGACACCAAGCGGAATGAGAAGA...AATGTGACTAGGGTGGCCCACCTCACCAAGTGGGATGGGGAAGGCTAAGATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGTGTGTAAACAGGCATTaGCTGGATAGAGGGAACACA +
Preference number: 4 (lower is better)
Translates to: GVCVNRHWLDRGNTGARLCVNRH*LDRGNT
Trigger: TGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACA...CAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp AGCTGGGATTCAGTCCTCAAATTCTGGGGCATGCATCTTAGCCTTCCCCATCCCCCACAGATGGGTAAGTaGTATCTGGTAAGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: SWDSVLKFWGMHLSLPHPPQMGK*YLVRGG
Trigger: TCCTCCTCTTACCAGATACCACTTACCCATCTGTGG...GGGATGGGGAAGGCTAAGATGCATGCCCCAGAATTTGAGGACTGAATCCCAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGACCACAGATGGGTAAGTaGTATCTGGTAAGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGPQMGK*YLVRGG
Trigger: TCCTCCTCTTACCAGATACCACTTACCCATCTGTGG...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
3UTR CAA 72 bp AGGTGGGCCACCCTAGTCACATTGAGATATAACCAGTaGTTTGCAGATGGCTGTGGGACCATCTGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: RWATLVTLRYNQ*FADGCGTICRG
Trigger: ACCTCTGCAGATGGTCCCACAGCCATCTGCAAACAACTGGTTATATCTCAATGTGACTAGGGTGGCCCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR TCA 90 bp GGTGGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGATTTACAGGAAAATCATaGGAAGCAGGAACAAACAGG +
Preference number: 4 (lower is better)
Translates to: GGLAVRPGVCVNRHWLDRFTGKS*EAGTNR
Trigger: CCTGTTTGTTCCTGCTTCTCATGATTTTCCTGTAAA...TCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR GCA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGACAAAGATCAAGTCCTTaGAGCAGTTCCAGCAATCCT +
Preference number: 4 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGQRSSP*SSSSNP
Trigger: AGGATTGCTGGAACTGCTGCAAGGACTTGATCTTTG...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR GCA 90 bp GGCCATAAGTCTTATTTAATGCAACAATGCTACCCCATTCCACAGATGGGTAAGGGGGAGATCTCAATCTaGTCCACCCACGAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: GHKSYLMQQCYPIPQMGKGEISI*STHEWG
Trigger: GCCCCACTCGTGGGTGGAGCAGATTGAGATCTCCCC...CTTACCCATCTGTGGAATGGGGTAGCATTGTTGCATTAAATAAGACTTATGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR GCA 90 bp GGCCATAAGTCTTATTTAATGCAACAATGCTACCCCATTCCACAGATGGGTAAGCGCAGGTGCTCTTCGTaGATCATGCGCTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: GHKSYLMQQCYPIPQMGKRRCSS*IMRSMA
Trigger: GGCCATGGAGCGCATGATGCACGAAGAGCACCTGCG...CTTACCCATCTGTGGAATGGGGTAGCATTGTTGCATTAAATAAGACTTATGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR GCA 90 bp AGGTGCTGTGAAGACCTGACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACTCAAATTCTGGGGCATaGATCTTAGCCTTCCCCATC +
Preference number: 4 (lower is better)
Translates to: RCCEDLTFQRREGQEANDSNSGA*ILAFPI
Trigger: GATGGGGAAGGCTAAGATGCATGCCCCAGAATTTGA...GTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGTCAGGTCTTCACAGCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCTATGTCCTGTGAATaGGTCGATGAAGAAGTTCTC +
Preference number: 4 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGAMSCE*VDEEVL
Trigger: GAGAACTTCTTCATCGACCCATTCACAGGACATAGC...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CCA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCAGCTATGTCCTGTGAATaGGTCGATGAAGAAGTTCTC +
Preference number: 4 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLAAMSCE*VDEEVL
Trigger: GAGAACTTCTTCATCGACCCATTCACAGGACATAGC...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CCA 90 bp GTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGCTGTCTTCAGGTCTGTaGTCTTGTTTATGTGTTTCA +
Preference number: 4 (lower is better)
Translates to: VCVNRHWLDRGNTGARLRLSSGL*SCLCVS
Trigger: TGAAACACATAAACAAGACCACAGACCTGAAGACAG...CCGCAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGATGTGTAAACAGGCATTaGCTGGATAGAGGGAACACA +
Preference number: 4 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGCVNRH*LDRGNT
Trigger: TGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACA...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp AAGAGAAAGGCTGCTGCTGGAGCTTGTGAAGCGCAAGGCACAAATGGCAAATTACCAGTTGTTTGCAGATaGCTGTGGGACCATCTGCAG +
Preference number: 4 (lower is better)
Translates to: KRKAAAGACEAQGTNGKLPVVCR*LWDHLQ
Trigger: CTGCAGATGGTCCCACAGCCATCTGCAAACAACTGG...TAATTTGCCATTTGTGCCTTGCGCTTCACAAGCTCCAGCAGCAGCCTTTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR TCA 90 bp GGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGTTTACAGGAAAATCATaGGAAGCAGGAACAAACAGG +
Preference number: 4 (lower is better)
Translates to: GVCVNRHWLDRGNTGARLFTGKS*EAGTNR
Trigger: CCTGTTTGTTCCTGCTTCTCATGATTTTCCTGTAAA...CAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR TCA 90 bp CATAAGTCTTATTTAATGCAACAATGCTACCCCATTCCACAGATGGGTAAGTGGCCAGCACCTCGAAGCTaGTGCACATGTCGGGCGTCA +
Preference number: 4 (lower is better)
Translates to: HKSYLMQQCYPIPQMGKWPAPRS*CTCRAS
Trigger: TGACGCCCGACATGTGCATCAGCTTCGAGGTGCTGG...CCACTTACCCATCTGTGGAATGGGGTAGCATTGTTGCATTAAATAAGACTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562250.1
CDS-3UTR GCA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGATATCCTCATCCTCCTTaGCCAGATTTTCCACATCAT +
Preference number: 4 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGYPHPP*PDFPHH
Trigger: ATGATGTGGAAAATCTGGGCAAGGAGGATGAGGATA...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CCA 90 bp AGAAGAGAAAGGCTGCTGCTGGAGCTTGTGAAGCGCAAGGCACAAATGGCAAATCTTCCGCACCTCAACTaGCCTCATCATTTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: RRERLLLELVKRKAQMANLPHLN*PHHFLH
Trigger: ATGGAGAAAATGATGAGGCCAGTTGAGGTGCGGAAG...ATTTGCCATTTGTGCCTTGCGCTTCACAAGCTCCAGCAGCAGCCTTTCTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS-3UTR CCA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCATGGTTTTGTAGGAAATaGGCAGCTTGGAGATGTCAA +
Preference number: 4 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLAWFCRK*AAWRCQ
Trigger: TTGACATCTCCAAGCTGCCCATTTCCTACAAAACCA...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CCA 90 bp AGAAGAGAAAGGCTGCTGCTGGAGCTTGTGAAGCGCAAGGCACAAATGGCAAATTTGTGCTCACGAACTTaGGCACTTCACACTCGTTCA +
Preference number: 4 (lower is better)
Translates to: RRERLLLELVKRKAQMANLCSRT*ALHTRS
Trigger: TGAACGAGTGTGAAGTGCCCAAGTTCGTGAGCACAA...ATTTGCCATTTGTGCCTTGCGCTTCACAAGCTCCAGCAGCAGCCTTTCTCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS-3UTR CCA 90 bp GGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCTGTCTTCAGGTCTGTaGTCTTGTTTATGTGTTTCA +
Preference number: 4 (lower is better)
Translates to: GVCVNRHWLDRGNTGARLLSSGL*SCLCVS
Trigger: TGAAACACATAAACAAGACCACAGACCTGAAGACAG...CAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR TCA 90 bp CATAAGTCTTATTTAATGCAACAATGCTACCCCATTCCACAGATGGGTAAGTGGAGTCCTCATAGGTGGTaGGGCGGCTCACAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: HKSYLMQQCYPIPQMGKWSPHRW*GGSQGH
Trigger: ATGGCCTTGTGAGCCGCCTCACCACCTATGAGGACT...CCACTTACCCATCTGTGGAATGGGGTAGCATTGTTGCATTAAATAAGACTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR TCA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGATTTCATAAAACTCAATaGCACGGTCCATCTCAGGTT +
Preference number: 4 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGFHKTQ*HGPSQV
Trigger: AACCTGAGATGGACCGTGTCATTGAGTTTTATGAAA...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR TCA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCATTTCATAAAACTCAATaGCACGGTCCATCTCAGGTT +
Preference number: 4 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLAFHKTQ*HGPSQV
Trigger: AACCTGAGATGGACCGTGTCATTGAGTTTTATGAAA...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR TCA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCATTTACAGGAAAATCATaGGAAGCAGGAACAAACAGG +
Preference number: 4 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLAFTGKS*EAGTNR
Trigger: CCTGTTTGTTCCTGCTTCTCATGATTTTCCTGTAAA...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR GCA 90 bp AAGAGAAAGGCTGCTGCTGGAGCTTGTGAAGCGCAAGGCACAAATGGCAAATTATCTCTGAGCGTCTCCTaGTTTAAGGTGATTTCCTCC +
Preference number: 4 (lower is better)
Translates to: KRKAAAGACEAQGTNGKLSLSVS*FKVISS
Trigger: GGAGGAAATCACCTTAAAGCAGGAGACGCTCAGAGA...TAATTTGCCATTTGTGCCTTGCGCTTCACAAGCTCCAGCAGCAGCCTTTCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS-3UTR CCA 90 bp CATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGAGGAAGGGTTATCTCCAAAATATTaGTACACTGCAAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: HSNGEKDRKQTTGQGEEGLSPKY*YTASPH
Trigger: ATGAGGACTTGCAGTGTACCAATATTTTGGAGATAA...CCCTTCCTCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGTTATCTCCAAAATATTaGTACACTGCAAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: VCVNRHWLDRGNTGARLRLSPKY*YTASPH
Trigger: ATGAGGACTTGCAGTGTACCAATATTTTGGAGATAA...CCGCAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCACTGTCTTCAGGTCTGTaGTCTTGTTTATGTGTTTCA +
Preference number: 4 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLALSSGL*SCLCVS
Trigger: TGAAACACATAAACAAGACCACAGACCTGAAGACAG...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp AGCTGGGATTCAGTCCTCAAATTCTGGGGCATGCATCTTAGCCTTCCCCATCCCCTGTCTTCAGGTCTGTaGTCTTGTTTATGTGTTTCA +
Preference number: 4 (lower is better)
Translates to: SWDSVLKFWGMHLSLPHPLSSGL*SCLCVS
Trigger: TGAAACACATAAACAAGACCACAGACCTGAAGACAG...GGGATGGGGAAGGCTAAGATGCATGCCCCAGAATTTGAGGACTGAATCCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR TCA 90 bp AAGAGAAAGGCTGCTGCTGGAGCTTGTGAAGCGCAAGGCACAAATGGCAAATTAAGCAATCCTGCATGTTaGTCCAGTAGTTCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: KRKAAAGACEAQGTNGKLSNPAC*SSSSCG
Trigger: ACCACAAGAACTACTGGATCAACATGCAGGATTGCT...TAATTTGCCATTTGTGCCTTGCGCTTCACAAGCTCCAGCAGCAGCCTTTCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS-3UTR TCA 90 bp CATAAGTCTTATTTAATGCAACAATGCTACCCCATTCCACAGATGGGTAAGTGGGGAAGAACCGCTCTGTaGTTTTCACAATGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: HKSYLMQQCYPIPQMGKWGRTAL*FSQWAG
Trigger: CCCGGCCCATTGTGAAAATCACAGAGCGGTTCTTCC...CCACTTACCCATCTGTGGAATGGGGTAGCATTGTTGCATTAAATAAGACTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR GCA 90 bp GGCCATAAGTCTTATTTAATGCAACAATGCTACCCCATTCCACAGATGGGTAAGTCCACAGGCTTTCGATaGCCAGGAAGTGCTCATCCT +
Preference number: 4 (lower is better)
Translates to: GHKSYLMQQCYPIPQMGKSTGFR*PGSAHP
Trigger: AGGATGAGCACTTCCTGGGCATCGAAAGCCTGTGGA...CTTACCCATCTGTGGAATGGGGTAGCATTGTTGCATTAAATAAGACTTATGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS-3UTR GCA 90 bp GGCCATAAGTCTTATTTAATGCAACAATGCTACCCCATTCCACAGATGGGTAAGTCCTGGTACCACTGCTaGTTCTTTTGCAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GHKSYLMQQCYPIPQMGKSWYHC*FFCSSW
Trigger: CCAGGAGCTGCAAAAGAAGCAGCAGTGGTACCAGGA...CTTACCCATCTGTGGAATGGGGTAGCATTGTTGCATTAAATAAGACTTATGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CCA 90 bp AGAAGAGAAAGGCTGCTGCTGGAGCTTGTGAAGCGCAAGGCACAAATGGCAAATTGGTTTTGTAGGAAATaGGCAGCTTGGAGATGTCAA +
Preference number: 4 (lower is better)
Translates to: RRERLLLELVKRKAQMANWFCRK*AAWRCQ
Trigger: TTGACATCTCCAAGCTGCCCATTTCCTACAAAACCA...ATTTGCCATTTGTGCCTTGCGCTTCACAAGCTCCAGCAGCAGCCTTTCTCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS-3UTR CCA 90 bp GGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGTTATCTCCAAAATATTaGTACACTGCAAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: GVCVNRHWLDRGNTGARLLSPKY*YTASPH
Trigger: ATGAGGACTTGCAGTGTACCAATATTTTGGAGATAA...CAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR GCA 90 bp CATAAGTCTTATTTAATGCAACAATGCTACCCCATTCCACAGATGGGTAAGTGGTTCACCTCTTGCTCCTaGTCAAACCTGCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: HKSYLMQQCYPIPQMGKWFTSCS*SNLLHR
Trigger: CCTGTGCAGCAGGTTTGAGCAGGAGCAAGAGGTGAA...CCACTTACCCATCTGTGGAATGGGGTAGCATTGTTGCATTAAATAAGACTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS-3UTR GCA 90 bp GGCCATAAGTCTTATTTAATGCAACAATGCTACCCCATTCCACAGATGGGTAAGCCTCCCGATATTCCTTaGTCTTCTCATTCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: GHKSYLMQQCYPIPQMGKPPDIP*SSHSAW
Trigger: CCAAGCGGAATGAGAAGAGCAAGGAATATCGGGAGG...CTTACCCATCTGTGGAATGGGGTAGCATTGTTGCATTAAATAAGACTTATGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGATTATCTCCAAAATATTaGTACACTGCAAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGLSPKY*YTASPH
Trigger: ATGAGGACTTGCAGTGTACCAATATTTTGGAGATAA...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CCA 90 bp GGCCATAAGTCTTATTTAATGCAACAATGCTACCCCATTCCACAGATGGGTAAGTTCTTTTGCAGCTCCTaGGTCTCCTTCTCAAAGCGG +
Preference number: 4 (lower is better)
Translates to: GHKSYLMQQCYPIPQMGKFFCSS*VSFSKR
Trigger: CCGCTTTGAGAAGGAGACCCAGGAGCTGCAAAAGAA...CTTACCCATCTGTGGAATGGGGTAGCATTGTTGCATTAAATAAGACTTATGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR TCA 90 bp AAGAGAAAGGCTGCTGCTGGAGCTTGTGAAGCGCAAGGCACAAATGGCAAATTATTTCATAAAACTCAATaGCACGGTCCATCTCAGGTT +
Preference number: 4 (lower is better)
Translates to: KRKAAAGACEAQGTNGKLFHKTQ*HGPSQV
Trigger: AACCTGAGATGGACCGTGTCATTGAGTTTTATGAAA...TAATTTGCCATTTGTGCCTTGCGCTTCACAAGCTCCAGCAGCAGCCTTTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR TCA 90 bp CATAAGTCTTATTTAATGCAACAATGCTACCCCATTCCACAGATGGGTAAGTGGCCTTTTCCTCCTTCTTaGTGGTCTCCTTGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: HKSYLMQQCYPIPQMGKWPFPPS*WSPWAS
Trigger: TGAAGCCCAAGGAGACCATCAAGAAGGAGGAAAAGG...CCACTTACCCATCTGTGGAATGGGGTAGCATTGTTGCATTAAATAAGACTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS-3UTR GCA 90 bp GGCCATAAGTCTTATTTAATGCAACAATGCTACCCCATTCCACAGATGGGTAAGGTGCCTGGTTTGAATTaGTCAGCTTCCCAGATTCTC +
Preference number: 4 (lower is better)
Translates to: GHKSYLMQQCYPIPQMGKVPGLN*SASQIL
Trigger: GAGAATCTGGGAAGCTGAGCAATTCAAACCAGGCAC...CTTACCCATCTGTGGAATGGGGTAGCATTGTTGCATTAAATAAGACTTATGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS-3UTR CCA 90 bp CATAAGTCTTATTTAATGCAACAATGCTACCCCATTCCACAGATGGGTAAGTGGATTCTGGAGCGTCTCTaGGTGTCTGGAGATGGAATG +
Preference number: 4 (lower is better)
Translates to: HKSYLMQQCYPIPQMGKWILERL*VSGDGM
Trigger: CATTCCATCTCCAGACACCCAGAGACGCTCCAGAAT...CCACTTACCCATCTGTGGAATGGGGTAGCATTGTTGCATTAAATAAGACTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS-3UTR CCA 90 bp GGCCATAAGTCTTATTTAATGCAACAATGCTACCCCATTCCACAGATGGGTAAGTCAGTCCTCAAATTCTaGGGCATGCATCTTAGCCTT +
Preference number: 4 (lower is better)
Translates to: GHKSYLMQQCYPIPQMGKSVLKF*GMHLSL
Trigger: AAGGCTAAGATGCATGCCCCAGAATTTGAGGACTGA...CTTACCCATCTGTGGAATGGGGTAGCATTGTTGCATTAAATAAGACTTATGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS GCA 90 bp GTAGCGCAGCTGGATGCGCTCCTCCGCGACCAGAAACACGCGCTCTaGCACGTCCTCCTCCGCGGGCTTCGCTGGGTTGCGGAAGAACCG +
Preference number: 5 (lower is better)
Translates to: VAQLDALLRDQKHAL*HVLLRGLRWVAEEP
Trigger: CGGTTCTTCCGCAACCCAGCGAAGCCCGCGGAGGAGGACGTGGCAGAGCGCGTGTTTCTGGTCGCGGAGGAGCGCATCCAGCTGCGCTAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
ENST00000565609.1
CDS TCA 90 bp TGCTGTCCACCTCGGTGCGCCGCAGGAACTCGCGCTTGGAGGCCGTaGTGTGGTCCTCACGGCAGTGGTAGCGCAGCTGGATGCGCTCCT +
Preference number: 5 (lower is better)
Translates to: CCPPRCAAGTRAWRP*CGPHGSGSAAGCAP
Trigger: AGGAGCGCATCCAGCTGCGCTACCACTGCCGTGAGGACCACATCACGGCCTCCAAGCGCGAGTTCCTGCGGCGCACCGAGGTGGACAGCA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
ENST00000565609.1
CDS GCA 90 bp CGCTTCCCCGATAGCACAAGGACCCAGGAGTGCACCCGCAGGCCGTaGAGGGCATCCGGCTTTGCCTTCTCCGCTTCCATGAGGCGCTCC +
Preference number: 5 (lower is better)
Translates to: RFPDSTRTQECTRRP*RASGFAFSASMRRS
Trigger: GGAGCGCCTCATGGAAGCGGAGAAGGCAAAGCCGGATGCCCTGCACGGCCTGCGGGTGCACTCCTGGGTCCTTGTGCTATCGGGGAAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000564132.1
CDS GCA 90 bp TTCTCAGGCACCTCGCGCTTCCCCGATAGCACAAGGACCCAGGAGTaGACCCGCAGGCCGTGCAGGGCATCCGGCTTTGCCTTCTCCGCT +
Preference number: 5 (lower is better)
Translates to: FSGTSRFPDSTRTQE*TRRPCRASGFAFSA
Trigger: AGCGGAGAAGGCAAAGCCGGATGCCCTGCACGGCCTGCGGGTGCACTCCTGGGTCCTTGTGCTATCGGGGAAGCGCGAGGTGCCTGAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000564132.1
CDS CCA 90 bp GGGTGCAGGAAGAGGGGCACGCGGTCCGGGCACAGATGGCTGTACTaGCGGGAGAAGTTGTCTGCCACCTGCAGCAGGTGTTCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: GCRKRGTRSGHRWLY*REKLSATCSRCSSL
Trigger: CAAGGAGGAACACCTGCTGCAGGTGGCAGACAACTTCTCCCGCCAGTACAGCCATCTGTGCCCGGACCGCGTGCCCCTCTTCCTGCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000563126.5
CDS CCA 90 bp GACCAGAAACACGCGCTCTGCCACGTCCTCCTCCGCGGGCTTCGCTaGGTTGCGGAAGAACCGCTCTGTGATTTTCACAATGGGCCGGGG +
Preference number: 5 (lower is better)
Translates to: DQKHALCHVLLRGLR*VAEEPLCDFHNGPG
Trigger: CCCCGGCCCATTGTGAAAATCACAGAGCGGTTCTTCCGCAACCCAGCGAAGCCCGCGGAGGAGGACGTGGCAGAGCGCGTGTTTCTGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GGTGGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAAGGTGCGAGGGCGGCTaGAGAGGGTCAGGCAGGGGC +
Preference number: 5 (lower is better)
Translates to: GGLAVRPGVCVNRHWLDRRCEGG*RGSGRG
Trigger: GCCCCTGCCTGACCCTCTCAAGCCGCCCTCGCACCT...TCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CAA 90 bp TTCTGGTACTTGAGCACAGTGGTCGAGGAGTACAGGTGCGAGGGCGGCTTGAGAAGGTGCGAGGGCGGCTaGAGAGGGTCAGGCAGGGGC +
Preference number: 5 (lower is better)
Translates to: FWYLSTVVEEYRCEGGLRRCEGG*RGSGRG
Trigger: GCCCCTGCCTGACCCTCTCAAGCCGCCCTCGCACCT...TCTCAAGCCGCCCTCGCACCTGTACTCCTCGACCACTGTGCTCAAGTACCAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564297.5
CDS GCA 90 bp AGGGTTGTGCTCACGAACTTGGGCACTTCACACTCGTTCAGGGGGTaGAGGAAGAGGGGCACGCGGTCCGGGCACAGATGGCTGTACTGG +
Preference number: 5 (lower is better)
Translates to: RVVLTNLGTSHSFRG*RKRGTRSGHRWLYW
Trigger: CCAGTACAGCCATCTGTGCCCGGACCGCGTGCCCCTCTTCCTGCACCCCCTGAACGAGTGTGAAGTGCCCAAGTTCGTGAGCACAACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS GCA 90 bp CTCACGAACTTCAGCCTTACGGGCACTTCACACTCGTTCAGGGGGTaGAGGAAGAGGGGCACGCGGTCCGGGCACAGATGGCTGTACTGG +
Preference number: 5 (lower is better)
Translates to: LTNFSLTGTSHSFRG*RKRGTRSGHRWLYW
Trigger: CCAGTACAGCCATCTGTGCCCGGACCGCGTGCCCCTCTTCCTGCACCCCCTGAACGAGTGTGAAGTGCCCGTAAGGCTGAAGTTCGTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563126.5
CDS CCA 90 bp CGGCCTCCTCCTCCTCCTCCACCTTCTCCCTCAGGACCTCCATTCTaGAGCGTCTCTGGGTGTCTGGAGATGGAATGTCTCCCTCCGAGG +
Preference number: 5 (lower is better)
Translates to: RPPPPPPPSPSGPPF*SVSGCLEMECLPPR
Trigger: CCTCGGAGGGAGACATTCCATCTCCAGACACCCAGAGACGCTCCAGAATGGAGGTCCTGAGGGAGAAGGTGGAGGAGGAGGAGGAGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000394337.8
ENST00000563126.5
ENST00000564297.5
CDS CCA 90 bp GACCAGAAACACGCGCTCTGCCACGTCCTCCTCCGCGGGCTTCGCTaGGTTGCGGAAGAACCGCTCTGTGATTTTCTGGGAGGCCAGAAC +
Preference number: 5 (lower is better)
Translates to: DQKHALCHVLLRGLR*VAEEPLCDFLGGQN
Trigger: GTTCTGGCCTCCCAGAAAATCACAGAGCGGTTCTTCCGCAACCCAGCGAAGCCCGCGGAGGAGGACGTGGCAGAGCGCGTGTTTCTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565609.1
CDS-3UTR CAA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGGCGGGCTTCGCTGGGTaGCGGAAGAACCGCTCTGTG +
Preference number: 5 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGAGFAG*RKNRSV
Trigger: CACAGAGCGGTTCTTCCGCAACCCAGCGAAGCCCGC...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGCGCAGGAACTCGCGCTaGGAGGCCGTGATGTGGTCC +
Preference number: 5 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGRRNSR*EAVMWS
Trigger: GGACCACATCACGGCCTCCAAGCGCGAGTTCCTGCG...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp CTGACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGAGGAAGGTGCGAGGGCGGCTaGAGAGGGTCAGGCAGGGGC +
Preference number: 5 (lower is better)
Translates to: LTFQRREGQEANDRPRGGRCEGG*RGSGRG
Trigger: GCCCCTGCCTGACCCTCTCAAGCCGCCCTCGCACCT...TCCTCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS-3UTR CAA 90 bp TGGTACTTGAGCACAGTGGTCGAGGAGTACAGGTGCGAGGGCGGCTTGAGAGGGGTGTGGGCCGGAGGGTaGTGCTCACGAACTTGGGAG +
Preference number: 5 (lower is better)
Translates to: WYLSTVVEEYRCEGGLRGVWAGG*CSRTWE
Trigger: CTCCCAAGTTCGTGAGCACAACCCTCCGGCCCACAC...CCCTCTCAAGCCGCCCTCGCACCTGTACTCCTCGACCACTGTGCTCAAGTACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564297.5
CDS GCA 90 bp CGCTGCTTGAAGTCGCTGAGGCACTCATCCTTGAGGCGCACCGCCTaGCAGCATGTTAGTTTCTCTCCTGGCGGGAGCTGGGCCAGGAAT +
Preference number: 5 (lower is better)
Translates to: RCLKSLRHSSLRRTA*QHVSFSPGGSWARN
Trigger: ATTCCTGGCCCAGCTCCCGCCAGGAGAGAAACTAACATGCTGGCAGGCGGTGCGCCTCAAGGATGAGTGCCTCAGCGACTTCAAGCAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
ENST00000565609.1
CDS CCA 90 bp GGGCACAGCTGTCCCAGTTGTAGAGCTCGGGGTAGGGCATCAGTGTaGGCCGGAGGGTTGTGCTCACGAACTTGGGCACTTCACACTCGT +
Preference number: 5 (lower is better)
Translates to: GHSCPSCRARGRASV*AGGLCSRTWALHTR
Trigger: ACGAGTGTGAAGTGCCCAAGTTCGTGAGCACAACCCTCCGGCCCACACTGATGCCCTACCCCGAGCTCTACAACTGGGACAGCTGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS CCA 90 bp GGGCACAGCTGTCCCAGTTGTAGAGCTCGGGGTAGGGCATCAGTGTaGGCCGGAGGGTTGTGCTCACGAACTTCAGCCTTACGGGCACTT +
Preference number: 5 (lower is better)
Translates to: GHSCPSCRARGRASV*AGGLCSRTSALRAL
Trigger: AAGTGCCCGTAAGGCTGAAGTTCGTGAGCACAACCCTCCGGCCCACACTGATGCCCTACCCCGAGCTCTACAACTGGGACAGCTGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563126.5
CDS-3UTR CAA 90 bp CATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGAGGAAGGGGCGGGCTTCGCTGGGTaGCGGAAGAACCGCTCTGTG +
Preference number: 5 (lower is better)
Translates to: HSNGEKDRKQTTGQGEEGAGFAG*RKNRSV
Trigger: CACAGAGCGGTTCTTCCGCAACCCAGCGAAGCCCGC...CCCTTCCTCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GGTGGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGACTGAGGCACTCATCCTaGAGGCGCACCGCCTGCCAG +
Preference number: 5 (lower is better)
Translates to: GGLAVRPGVCVNRHWLDRLRHSS*RRTACQ
Trigger: CTGGCAGGCGGTGCGCCTCAAGGATGAGTGCCTCAG...TCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS GCA 90 bp TTCTCAAAGCGGGCCTGGATGAGGTTGGCCTTGTTGATGAGCCGCTaGTTGAAGTCGCTGAGGCACTCATCCTTGAGGCGCACCGCCTGC +
Preference number: 5 (lower is better)
Translates to: FSKRAWMRLALLMSR*LKSLRHSSLRRTAC
Trigger: GCAGGCGGTGCGCCTCAAGGATGAGTGCCTCAGCGACTTCAAGCAGCGGCTCATCAACAAGGCCAACCTCATCCAGGCCCGCTTTGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
ENST00000565609.1
CDS GCA 90 bp GGATTTCGTGGGTTCTCAGGGCCAGGCCACTCCACTCCCATATGGTaGTGGGCCCCTCCTCAGCTCCTTCAAGACTCTGCTTGCCTACCT +
Preference number: 5 (lower is better)
Translates to: GFRGFSGPGHSTPIW*WAPPQLLQDSACLP
Trigger: AGGTAGGCAAGCAGAGTCTTGAAGGAGCTGAGGAGGGGCCCAGCACCATATGGGAGTGGAGTGGCCTGGCCCTGAGAACCCACGAAATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565609.1
CDS CCA 90 bp TCCTCCTCCACCTTCTCCCTCAGGACCTCCATTCTGGAGCGTCTCTaGGTGTCTGGAGATGGAATGTCTCCCTCCGAGGACAGCCTGCTC +
Preference number: 5 (lower is better)
Translates to: SSSTFSLRTSILERL*VSGDGMSPSEDSLL
Trigger: GAGCAGGCTGTCCTCGGAGGGAGACATTCCATCTCCAGACACCCAGAGACGCTCCAGAATGGAGGTCCTGAGGGAGAAGGTGGAGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394337.8
ENST00000563126.5
ENST00000564297.5
CDS CCA 90 bp GCCATGGAGACGCAGCTATGGAGAAGGTTCAAAGCCCTCGTGGCCTaGTGTCTCGCTCTCCCCAAGGTCTGGCTGCCATTGCTTCCCTCT +
Preference number: 5 (lower is better)
Translates to: AMETQLWRRFKALVA*CLALPKVWLPLLPS
Trigger: AGAGGGAAGCAATGGCAGCCAGACCTTGGGGAGAGCGAGACACCAGGCCACGAGGGCTTTGAACCTTCTCCATAGCTGCGTCTCCATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564132.1
CDS CCA 90 bp AGTGGGCCATGGAGACGCAGCTATGGAGAAGGTTCAAAGCCCTCGTaGCCTGGTGTCTCGCTCTCCCCAAGGTCTGGCTGCCATTGCTTC +
Preference number: 5 (lower is better)
Translates to: SGPWRRSYGEGSKPS*PGVSLSPRSGCHCF
Trigger: GAAGCAATGGCAGCCAGACCTTGGGGAGAGCGAGACACCAGGCCACGAGGGCTTTGAACCTTCTCCATAGCTGCGTCTCCATGGCCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564132.1
CDS CCA 90 bp GGGCACAGCTGTCCCAGTTGTAGAGCTCGGGGTAGGGCATCAGTGTaGGCCGGAGGGTTGTGCTCACGAACTTCCAAAGATCCAGTCTCC +
Preference number: 5 (lower is better)
Translates to: GHSCPSCRARGRASV*AGGLCSRTSKDPVS
Trigger: GGAGACTGGATCTTTGGAAGTTCGTGAGCACAACCCTCCGGCCCACACTGATGCCCTACCCCGAGCTCTACAACTGGGACAGCTGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569167.1
CDS-3UTR CAA 90 bp GGTGGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGTGTGGGCCGGAGGGTaGTGCTCACGAACTTGGGCA +
Preference number: 5 (lower is better)
Translates to: GGLAVRPGVCVNRHWLDRVWAGG*CSRTWA
Trigger: TGCCCAAGTTCGTGAGCACAACCCTCCGGCCCACAC...TCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CAA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGCGGCTCACAAGGCCATaGCTATTGAGGTACGGGGCC +
Preference number: 5 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGRLTRP*LLRYGA
Trigger: GGCCCCGTACCTCAATAGCAATGGCCTTGTGAGCCG...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGGCGGGCTTCGCTGGGTaGCGGAAGAACCGCTCTGTG +
Preference number: 5 (lower is better)
Translates to: GVCVNRHWLDRGNTGARLAGFAG*RKNRSV
Trigger: CACAGAGCGGTTCTTCCGCAACCCAGCGAAGCCCGC...CAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GACCTGACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGACTGAGGCACTCATCCTaGAGGCGCACCGCCTGCCAG +
Preference number: 5 (lower is better)
Translates to: DLTFQRREGQEANDRPRGLRHSS*RRTACQ
Trigger: CTGGCAGGCGGTGCGCCTCAAGGATGAGTGCCTCAG...TCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGTCAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGCGGGCCTGGATGAGGTaGGCCTTGTTGATGAGCCGC +
Preference number: 5 (lower is better)
Translates to: VCVNRHWLDRGNTGARLRRAWMR*ALLMSR
Trigger: GCGGCTCATCAACAAGGCCAACCTCATCCAGGCCCG...CCGCAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS TCA 90 bp CTCACTCTCCCACAGGACCCTACCTCCAGCTCTGACTCCCAGACCTaGTGTCTGGACAGCTTCTCCTCCCTCTTCAGGTGCATCATGGCC +
Preference number: 5 (lower is better)
Translates to: LTLPQDPTSSSDSQT*CLDSFSSLFRCIMA
Trigger: GGCCATGATGCACCTGAAGAGGGAGGAGAAGCTGTCCAGACATCAGGTCTGGGAGTCAGAGCTGGAGGTAGGGTCCTGTGGGAGAGTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565609.1
CDS GCA 90 bp CACGCGGTCCGGGCACAGATGGCTGTACTGGCGGGAGAAGTTGTCTaGCACCTGCAGCAGGTGTTCCTCCTTGGGTGTGTTGGTTTTGTA +
Preference number: 5 (lower is better)
Translates to: HAVRAQMAVLAGEVV*HLQQVFLLGCVGFV
Trigger: TACAAAACCAACACACCCAAGGAGGAACACCTGCTGCAGGTGGCAGACAACTTCTCCCGCCAGTACAGCCATCTGTGCCCGGACCGCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000563126.5
CDS GCA 90 bp TCATCCTCGGGTGTCAGCGTCACCTGGTTCTCCTGGTACCACTGCTaGTTCTTTTGCAGCTCCTGGGTCTCCTTCTCAAAGCGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: SSSGVSVTWFSWYHC*FFCSSWVSFSKRAW
Trigger: CCAGGCCCGCTTTGAGAAGGAGACCCAGGAGCTGCAAAAGAAGCAGCAGTGGTACCAGGAGAACCAGGTGACGCTGACACCCGAGGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
ENST00000565609.1
CDS CCA 90 bp CGGCCTCCTCCTCCTCCTCCACCTTCTCCCTCAGGACCTCCATTCTaGAGCGTCTCTGGGTGTCTGGAGATGGAATGTCTCCAAAGATCC +
Preference number: 5 (lower is better)
Translates to: RPPPPPPPSPSGPPF*SVSGCLEMECLQRS
Trigger: GGATCTTTGGAGACATTCCATCTCCAGACACCCAGAGACGCTCCAGAATGGAGGTCCTGAGGGAGAAGGTGGAGGAGGAGGAGGAGGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000569375.5
CDS CCA 90 bp TTTCGTGGGTTCTCAGGGCCAGGCCACTCCACTCCCATATGGTGCTaGGCCCCTCCTCAGCTCCTTCAAGACTCTGCTTGCCTACCTCAA +
Preference number: 5 (lower is better)
Translates to: FRGFSGPGHSTPIWC*APPQLLQDSACLPQ
Trigger: TTGAGGTAGGCAAGCAGAGTCTTGAAGGAGCTGAGGAGGGGCCCAGCACCATATGGGAGTGGAGTGGCCTGGCCCTGAGAACCCACGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565609.1
CDS-3UTR CAA 90 bp GACCTGACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGAGTGTGGGCCGGAGGGTaGTGCTCACGAACTTGGGCA +
Preference number: 5 (lower is better)
Translates to: DLTFQRREGQEANDRPRGVWAGG*CSRTWA
Trigger: TGCCCAAGTTCGTGAGCACAACCCTCCGGCCCACAC...TCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGTCAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS-3UTR CAA 90 bp GGTGGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGATTCTTGATGGTCGGCTaGAGAGGGTCAGGCAGGGGC +
Preference number: 5 (lower is better)
Translates to: GGLAVRPGVCVNRHWLDRFLMVG*RGSGRG
Trigger: GCCCCTGCCTGACCCTCTCAAGCCGACCATCAAGAA...TCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336825.12
CDS-3UTR CAA 90 bp CATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGAGGAAGGGCGGCTCACAAGGCCATaGCTATTGAGGTACGGGGCC +
Preference number: 5 (lower is better)
Translates to: HSNGEKDRKQTTGQGEEGRLTRP*LLRYGA
Trigger: GGCCCCGTACCTCAATAGCAATGGCCTTGTGAGCCG...CCCTTCCTCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGCTCAGAGTGAGCTTCTaGACTCGGGGTCCGAAGCTG +
Preference number: 5 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGLRVSF*TRGPKL
Trigger: CAGCTTCGGACCCCGAGTCAAGAAGCTCACTCTGAG...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGCAATGGGCCGGGGGTTaGACTCTGCACTGCTCAGAG +
Preference number: 5 (lower is better)
Translates to: VCVNRHWLDRGNTGARLRQWAGG*TLHCSE
Trigger: CTCTGAGCAGTGCAGAGTCAAACCCCCGGCCCATTG...CCGCAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GGTGGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGACAATGGGCCGGGGGTTaGACTCTGCACTGCTCAGAG +
Preference number: 5 (lower is better)
Translates to: GGLAVRPGVCVNRHWLDRQWAGG*TLHCSE
Trigger: CTCTGAGCAGTGCAGAGTCAAACCCCCGGCCCATTG...TCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCGGGCTTCGCTGGGTaGCGGAAGAACCGCTCTGTG +
Preference number: 5 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGAGFAG*RKNRSV
Trigger: CACAGAGCGGTTCTTCCGCAACCCAGCGAAGCCCGC...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCACGCAGGAACTCGCGCTaGGAGGCCGTGATGTGGTCC +
Preference number: 5 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLARRNSR*EAVMWS
Trigger: GGACCACATCACGGCCTCCAAGCGCGAGTTCCTGCG...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCACTGAGGCACTCATCCTaGAGGCGCACCGCCTGCCAG +
Preference number: 5 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLALRHSS*RRTACQ
Trigger: CTGGCAGGCGGTGCGCCTCAAGGATGAGTGCCTCAG...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGGCCTGGATGAGGTaGGCCTTGTTGATGAGCCGC +
Preference number: 5 (lower is better)
Translates to: GVCVNRHWLDRGNTGARLRAWMR*ALLMSR
Trigger: GCGGCTCATCAACAAGGCCAACCTCATCCAGGCCCG...CAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GGTGGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAAGTGGGGCCAGTTCCTaGTGTCGATTGAGGCGCTGC +
Preference number: 5 (lower is better)
Translates to: GGLAVRPGVCVNRHWLDRSGASS*CRLRRC
Trigger: GCAGCGCCTCAATCGACACAAGGAACTGGCCCCACT...TCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp TGGTACTTGAGCACAGTGGTCGAGGAGTACAGGTGCGAGGGCGGCTTGAGAGGGTTCCCCTTCTGGTACTaGAGCACAGTGGTCGAGGAG +
Preference number: 5 (lower is better)
Translates to: WYLSTVVEEYRCEGGLRGFPFWY*STVVEE
Trigger: CTCCTCGACCACTGTGCTCAAGTACCAGAAGGGGAA...CCCTCTCAAGCCGCCCTCGCACCTGTACTCCTCGACCACTGTGCTCAAGTACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564297.5
CDS-3UTR CAA 90 bp GCAGTTCCCCTTCTGGTACTTGAGCACAGTGGTCGAGGAGTACAGGTGCGAGGGGTTGTGCTCACGAACTaGGGAGCTCCGCTGAGACAG +
Preference number: 5 (lower is better)
Translates to: AVPLLVLEHSGRGVQVRGVVLTN*GAPLRQ
Trigger: CTGTCTCAGCGGAGCTCCCAAGTTCGTGAGCACAAC...CCCTCGCACCTGTACTCCTCGACCACTGTGCTCAAGTACCAGAAGGGGAACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564297.5
CDS TCA 90 bp CGTCCTCCTCCGCGGGCTTCGCTGGGTTGCGGAAGAACCGCTCTGTaGTTTTCTGGGAGGCCAGAACATGCAAAGGATGAGCAAAGGATG +
Preference number: 5 (lower is better)
Translates to: RPPPRASLGCGRTAL*FSGRPEHAKDEQRM
Trigger: CATCCTTTGCTCATCCTTTGCATGTTCTGGCCTCCCAGAAAATCACAGAGCGGTTCTTCCGCAACCCAGCGAAGCCCGCGGAGGAGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565609.1
CDS GCA 90 bp TCTTCATCCTCGGGTGTCAGCGTCACCTGGTTCTCCTGGTACCACTaGTGCTTCTTTTGCAGCTCCTGGGTCTCCTTCTCAAAGCGGGCC +
Preference number: 5 (lower is better)
Translates to: SSSSGVSVTWFSWYH*CFFCSSWVSFSKRA
Trigger: GGCCCGCTTTGAGAAGGAGACCCAGGAGCTGCAAAAGAAGCAGCAGTGGTACCAGGAGAACCAGGTGACGCTGACACCCGAGGATGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
ENST00000565609.1
CDS CCA 90 bp CCCCTCCTCAGCTCCTTCAAGACTCTGCTTGCCTACCTCAAGAGATaGGGAGCTCACCACCTCTCCAGGCAGCCTACTCCATTGCTAGAC +
Preference number: 5 (lower is better)
Translates to: PLLSSFKTLLAYLKR*GAHHLSRQPTPLLD
Trigger: GTCTAGCAATGGAGTAGGCTGCCTGGAGAGGTGGTGAGCTCCCCATCTCTTGAGGTAGGCAAGCAGAGTCTTGAAGGAGCTGAGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565609.1
CDS CCA 90 bp TTTCTGTGCATGCCCGCAGGCAGGAGCAACGAACGTTCAGGACACTaGAGTCTGGGGTCGTTTGGCGATTCACGTGGAATAGCCCCTCCT +
Preference number: 5 (lower is better)
Translates to: FLCMPAGRSNERSGH*SLGSFGDSRGIAPP
Trigger: AGGAGGGGCTATTCCACGTGAATCGCCAAACGACCCCAGACTCCAGTGTCCTGAACGTTCGTTGCTCCTGCCTGCGGGCATGCACAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565609.1
CDS CCA 90 bp TCCCACAGGACCCTACCTCCAGCTCTGACTCCCAGACCTGATGTCTaGACAGCTTCTCCTCCCTCTTCAGGTGCATCATGGCCTCGTACT +
Preference number: 5 (lower is better)
Translates to: SHRTLPPALTPRPDV*TASPPSSGASWPRT
Trigger: AGTACGAGGCCATGATGCACCTGAAGAGGGAGGAGAAGCTGTCCAGACATCAGGTCTGGGAGTCAGAGCTGGAGGTAGGGTCCTGTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565609.1
CDS-3UTR CAA 90 bp CTGACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGAGGATACTGGCGGGAGAAGTaGTCTGCCACCTGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: LTFQRREGQEANDRPRGGYWREK*SATCSR
Trigger: CCTGCTGCAGGTGGCAGACAACTTCTCCCGCCAGTA...TCCTCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS-3UTR CAA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGTGTGGGCCGGAGGGTaGTGCTCACGAACTTGGGCA +
Preference number: 5 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGVWAGG*CSRTWA
Trigger: TGCCCAAGTTCGTGAGCACAACCCTCCGGCCCACAC...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CAA 90 bp GGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGCTCACAAGGCCATaGCTATTGAGGTACGGGGCC +
Preference number: 5 (lower is better)
Translates to: GVCVNRHWLDRGNTGARLRLTRP*LLRYGA
Trigger: GGCCCCGTACCTCAATAGCAATGGCCTTGTGAGCCG...CAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGTCAGGTTGCATGGACTaGTACGAGTGCACGCGCAGA +
Preference number: 5 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGSGCMD*YECTRR
Trigger: TCTGCGCGTGCACTCGTACAAGTCCATGCAACCTGA...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GGTGGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGACTCAGAGTGAGCTTCTaGACTCGGGGTCCGAAGCTG +
Preference number: 5 (lower is better)
Translates to: GGLAVRPGVCVNRHWLDRLRVSF*TRGPKL
Trigger: CAGCTTCGGACCCCGAGTCAAGAAGCTCACTCTGAG...TCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGTTGATGAGCCGCTGCTaGAAGTCGCTGAGGCACTCA +
Preference number: 5 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGLMSRC*KSLRHS
Trigger: TGAGTGCCTCAGCGACTTCAAGCAGCGGCTCATCAA...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCACGGGCCTGGATGAGGTaGGCCTTGTTGATGAGCCGC +
Preference number: 5 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLARAWMR*ALLMSR
Trigger: GCGGCTCATCAACAAGGCCAACCTCATCCAGGCCCG...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAGTTCCTTGTGTCGATaGAGGCGCTGCTCCAGGATG +
Preference number: 5 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGSSLCR*RRCSRM
Trigger: CATCCTGGAGCAGCGCCTCAATCGACACAAGGAACT...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGAGTGGGGCCAGTTCCTaGTGTCGATTGAGGCGCTGC +
Preference number: 5 (lower is better)
Translates to: GVCVNRHWLDRGNTGARLSGASS*CRLRRC
Trigger: GCAGCGCCTCAATCGACACAAGGAACTGGCCCCACT...CAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp AGCTGGGATTCAGTCCTCAAATTCTGGGGCATGCATCTTAGCCTTCCCCATCCCCCTTCCCCATCCCACTaGGTGAGGTGGGCCACCCTA +
Preference number: 5 (lower is better)
Translates to: SWDSVLKFWGMHLSLPHPPSPSH*VRWATL
Trigger: TAGGGTGGCCCACCTCACCAAGTGGGATGGGGAAGG...GGGATGGGGAAGGCTAAGATGCATGCCCCAGAATTTGAGGACTGAATCCCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS TCA 90 bp CGCCTCCTCTTCCTCTCGAAGCTTCAGAATCTCCAGCACCTGAAATaGGAAGTGTTGGAGGGCGTGATGGAGACACCCCTCCTCCACTCC +
Preference number: 5 (lower is better)
Translates to: RLLFLSKLQNLQHLK*EVLEGVMETPLLHS
Trigger: GGAGTGGAGGAGGGGTGTCTCCATCACGCCCTCCAACACTTCTCATTTCAGGTGCTGGAGATTCTGAAGCTTCGAGAGGAAGAGGAGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565609.1
CDS CCA 90 bp AGGAGAGGAAGTCTGGGCGTCCTTGATAGTACTCTGTCATTGTCCTaGGTGTCTCCTCCCGCTTCATCAGGCCATCCACACGGGCCGTTT +
Preference number: 5 (lower is better)
Translates to: RRGSLGVLDSTLSLS*VSPPASSGHPHGPF
Trigger: AAACGGCCCGTGTGGATGGCCTGATGAAGCGGGAGGAGACACCCAGGACAATGACAGAGTACTATCAAGGACGCCCAGACTTCCTCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGATGTCAATAGTGTCCTaGGTAAAGGCCGGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGMSIVS*VKAGSS
Trigger: GGAGCTCCCGGCCTTTACCAAGGACACTATTGACAT...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CAA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCATACTGGCGGGAGAAGTaGTCTGCCACCTGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLAYWREK*SATCSR
Trigger: CCTGCTGCAGGTGGCAGACAACTTCTCCCGCCAGTA...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CAA 90 bp GTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGACAAGGCCATTGCTATaGAGGTACGGGGCCCACTTC +
Preference number: 5 (lower is better)
Translates to: VCVNRHWLDRGNTGARLRTRPLL*RYGAHF
Trigger: GAAGTGGGCCCCGTACCTCAATAGCAATGGCCTTGT...CCGCAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGACGGTCCATCTCAGGTaGCATGGACTTGTACGAGTG +
Preference number: 5 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGTVHLR*HGLVRV
Trigger: CACTCGTACAAGTCCATGCAACCTGAGATGGACCGT...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGACAATGGGCCGGGGGTTaGACTCTGCACTGCTCAGAG +
Preference number: 5 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGQWAGG*TLHCSE
Trigger: CTCTGAGCAGTGCAGAGTCAAACCCCCGGCCCATTG...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGGGCGTCATGATGATCTaGTTGCCTTTGCTGTCCACC +
Preference number: 5 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGGVMMI*LPLLST
Trigger: GGTGGACAGCAAAGGCAACAAGATCATCATGACGCC...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGTTGATGAGCCGCTGCTaGAAGTCGCTGAGGCACTCA +
Preference number: 5 (lower is better)
Translates to: VCVNRHWLDRGNTGARLRLMSRC*KSLRHS
Trigger: TGAGTGCCTCAGCGACTTCAAGCAGCGGCTCATCAA...CCGCAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGTGGATGAGGTTGGCCTaGTTGATGAGCCGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: VCVNRHWLDRGNTGARLRWMRLA*LMSRCL
Trigger: CAAGCAGCGGCTCATCAACAAGGCCAACCTCATCCA...CCGCAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp CATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGAGGAAGGGTGGATGAGGTTGGCCTaGTTGATGAGCCGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: HSNGEKDRKQTTGQGEEGWMRLA*LMSRCL
Trigger: CAAGCAGCGGCTCATCAACAAGGCCAACCTCATCCA...CCCTTCCTCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGAGTTCCTTGTGTCGATaGAGGCGCTGCTCCAGGATG +
Preference number: 5 (lower is better)
Translates to: VCVNRHWLDRGNTGARLRSSLCR*RRCSRM
Trigger: CATCCTGGAGCAGCGCCTCAATCGACACAAGGAACT...CCGCAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAAGTGGGGCCAGTTCCTaGTGTCGATTGAGGCGCTGC +
Preference number: 5 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGSGASS*CRLRRC
Trigger: GCAGCGCCTCAATCGACACAAGGAACTGGCCCCACT...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GGTGGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGATTCCCCTTCTGGTACTaGAGCACAGTGGTCGAGGAG +
Preference number: 5 (lower is better)
Translates to: GGLAVRPGVCVNRHWLDRFPFWY*STVVEE
Trigger: CTCCTCGACCACTGTGCTCAAGTACCAGAAGGGGAA...TCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CAA 90 bp CCCATTCCACAGATGGGTAAGTGGTATCTGGTAAGAGGAGGAGCTGGGATTCAGCCTTCCCCATCCCACTaGGTGAGGTGGGCCACCCTA +
Preference number: 5 (lower is better)
Translates to: PIPQMGKWYLVRGGAGIQPSPSH*VRWATL
Trigger: TAGGGTGGCCCACCTCACCAAGTGGGATGGGGAAGG...CTGAATCCCAGCTCCTCCTCTTACCAGATACCACTTACCCATCTGTGGAATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS TCA 90 bp CTATTGAGGTACGGGGCCCACTTCTCCAGCTTTGCCCTCTTGTACTaGATCACCTTCTTCCCGTTCGGGCAGCGGGTCTCAAATGCTTCC +
Preference number: 5 (lower is better)
Translates to: LLRYGAHFSSFALLY*ITFFPFGQRVSNAS
Trigger: GGAAGCATTTGAGACCCGCTGCCCGAACGGGAAGAAGGTGATTCAGTACAAGAGGGCAAAGCTGGAGAAGTGGGCCCCGTACCTCAATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS TCA 90 bp TCTGGGAGGCCAGAACATGCAAAGGATGAGCAAAGGATGAGCGTGTaGGAGGAGATTTCTGTGCATGCCCGCAGGCAGGAGCAACGAACG +
Preference number: 5 (lower is better)
Translates to: SGRPEHAKDEQRMSV*EEISVHARRQEQRT
Trigger: CGTTCGTTGCTCCTGCCTGCGGGCATGCACAGAAATCTCCTCTCACACGCTCATCCTTTGCTCATCCTTTGCATGTTCTGGCCTCCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565609.1
CDS GCA 90 bp TGGGCTCCACCTGGGACAACAACCACCTTAGTAACACAGAGAGGCTaGCATGATCGGGGCATAGGACCACCTGGGTTCAAATCTACCCCT +
Preference number: 5 (lower is better)
Translates to: WAPPGTTTTLVTQRG*HDRGIGPPGFKSTP
Trigger: AGGGGTAGATTTGAACCCAGGTGGTCCTATGCCCCGATCATGGCAGCCTCTCTGTGTTACTAAGGTGGTTGTTGTCCCAGGTGGAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565609.1
CDS CCA 90 bp AGACCTGATGTCTGGACAGCTTCTCCTCCCTCTTCAGGTGCATCATaGCCTCGTACTGGTAGAGCAGCTTCTTGGTGTGCTCCATGGGCT +
Preference number: 5 (lower is better)
Translates to: RPDVWTASPPSSGAS*PRTGRAASWCAPWA
Trigger: AGCCCATGGAGCACACCAAGAAGCTGCTCTACCAGTACGAGGCCATGATGCACCTGAAGAGGGAGGAGAAGCTGTCCAGACATCAGGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000565609.1
CDS CCA 90 bp TCAGAATCTCCAGCACCTCCAGCTCTGACTCCCAGACCTGATGTCTaGACAGCTTCTCCTCCCTCTTCAGGTGCATCATGGCCTCGTACT +
Preference number: 5 (lower is better)
Translates to: SESPAPPALTPRPDV*TASPPSSGASWPRT
Trigger: AGTACGAGGCCATGATGCACCTGAAGAGGGAGGAGAAGCTGTCCAGACATCAGGTCTGGGAGTCAGAGCTGGAGGTGCTGGAGATTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS CCA 90 bp TGCGCTCCATGGCCTCCCGATATTCCTTGCTCTTCTCATTCCGCTTaGTGTCATAGATGGAGATGGTCAGTGTGTGCGCCGCCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: CAPWPPDIPCSSHSA*CHRWRWSVCAPPPL
Trigger: AAGAGGAGGCGGCGCACACACTGACCATCTCCATCTATGACACCAAGCGGAATGAGAAGAGCAAGGAATATCGGGAGGCCATGGAGCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
ENST00000565609.1
CDS CCA 90 bp AGGTACAGGTCTTCATCCTCGGGTGTCAGCGTCACCTGGTTCTCCTaGTACCACTGCTGCTTCTTTTGCAGCTCCTGGGTCTCCTTCTCA +
Preference number: 5 (lower is better)
Translates to: RYRSSSSGVSVTWFS*YHCCFFCSSWVSFS
Trigger: TGAGAAGGAGACCCAGGAGCTGCAAAAGAAGCAGCAGTGGTACCAGGAGAACCAGGTGACGCTGACACCCGAGGATGAAGACCTGTACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
ENST00000565609.1
CDS CCA 90 bp AGAGCAAAGATGAATTTCCTCGCCGGGATTCACCAGCGCCCATCCTaGTTCTCCCAAGTGGCTGGAATAAGACAGAGAGCCCCGGTTCCT +
Preference number: 5 (lower is better)
Translates to: RAKMNFLAGIHQRPS*FSQVAGIRQRAPVP
Trigger: AGGAACCGGGGCTCTCTGTCTTATTCCAGCCACTTGGGAGAACCAGGATGGGCGCTGGTGAATCCCGGCGAGGAAATTCATCTTTGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565609.1
CDS CCA 90 bp GCATCATGGCCTCGTACTGGTAGAGCAGCTTCTTGGTGTGCTCCATaGGCTCCACCTGGGACAACAACCACCTTAGTAACACAGAGAGGC +
Preference number: 5 (lower is better)
Translates to: ASWPRTGRAASWCAP*APPGTTTTLVTQRG
Trigger: GCCTCTCTGTGTTACTAAGGTGGTTGTTGTCCCAGGTGGAGCCCATGGAGCACACCAAGAAGCTGCTCTACCAGTACGAGGCCATGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565609.1
CDS-3UTR CAA 90 bp GTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGATGTCAATAGTGTCCTaGGTAAAGGCCGGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: VCVNRHWLDRGNTGARLRMSIVS*VKAGSS
Trigger: GGAGCTCCCGGCCTTTACCAAGGACACTATTGACAT...CCGCAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CAA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGCCCACTTCTCCAGCTTaGCCCTCTTGTACTGAATCA +
Preference number: 5 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGPTSPA*PSCTES
Trigger: TGATTCAGTACAAGAGGGCAAAGCTGGAGAAGTGGG...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp CTGACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGAGGAACAAGGCCATTGCTATaGAGGTACGGGGCCCACTTC +
Preference number: 5 (lower is better)
Translates to: LTFQRREGQEANDRPRGGTRPLL*RYGAHF
Trigger: GAAGTGGGCCCCGTACCTCAATAGCAATGGCCTTGT...TCCTCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGTCAGGTTGCATGGACTaGTACGAGTGCACGCGCAGA +
Preference number: 5 (lower is better)
Translates to: GVCVNRHWLDRGNTGARLSGCMD*YECTRR
Trigger: TCTGCGCGTGCACTCGTACAAGTCCATGCAACCTGA...CAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGGATAGTACTCTGTCATaGTCCTGGGTGTCTCCTCCC +
Preference number: 5 (lower is better)
Translates to: VCVNRHWLDRGNTGARLRDSTLS*SWVSPP
Trigger: GGGAGGAGACACCCAGGACAATGACAGAGTACTATC...CCGCAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp CCCATTCCACAGATGGGTAAGTGGTATCTGGTAAGAGGAGGAGCTGGGATTCAGCAATGGGCCGGGGGTTaGACTCTGCACTGCTCAGAG +
Preference number: 5 (lower is better)
Translates to: PIPQMGKWYLVRGGAGIQQWAGG*TLHCSE
Trigger: CTCTGAGCAGTGCAGAGTCAAACCCCCGGCCCATTG...CTGAATCCCAGCTCCTCCTCTTACCAGATACCACTTACCCATCTGTGGAATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGGGCGTCATGATGATCTaGTTGCCTTTGCTGTCCACC +
Preference number: 5 (lower is better)
Translates to: VCVNRHWLDRGNTGARLRGVMMI*LPLLST
Trigger: GGTGGACAGCAAAGGCAACAAGATCATCATGACGCC...CCGCAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGTTGATGAGCCGCTGCTaGAAGTCGCTGAGGCACTCA +
Preference number: 5 (lower is better)
Translates to: GVCVNRHWLDRGNTGARLLMSRC*KSLRHS
Trigger: TGAGTGCCTCAGCGACTTCAAGCAGCGGCTCATCAA...CAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp TGCATCTTAGCCTTCCCCATCCCACTTGGTGAGGTGGGCCACCCTAGTCACATTTGGATGAGGTTGGCCTaGTTGATGAGCCGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: CILAFPIPLGEVGHPSHIWMRLA*LMSRCL
Trigger: CAAGCAGCGGCTCATCAACAAGGCCAACCTCATCCA...AATGTGACTAGGGTGGCCCACCTCACCAAGTGGGATGGGGAAGGCTAAGATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS TCA 90 bp CCCGCTTCATCAGGCCATCCACACGGGCCGTTTCATAAAACTCAATaGCACGGTCCATCTCAGGTTGCATGGACTTGTACGAGTGCACGC +
Preference number: 5 (lower is better)
Translates to: PASSGHPHGPFHKTQ*HGPSQVAWTCTSAR
Trigger: GCGTGCACTCGTACAAGTCCATGCAACCTGAGATGGACCGTGTCATTGAGTTTTATGAAACGGCCCGTGTGGATGGCCTGATGAAGCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS CCA 90 bp TCCTCCTCCACCTTCTCCCTCAGGACCTCCATTCTGGAGCGTCTCTaGGTGTCTGGAGATGGAATGTCTCCAAAGATCCAGTCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: SSSTFSLRTSILERL*VSGDGMSPKIQSPL
Trigger: AAGAGGAGACTGGATCTTTGGAGACATTCCATCTCCAGACACCCAGAGACGCTCCAGAATGGAGGTCCTGAGGGAGAAGGTGGAGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000569375.5
CDS-3UTR CAA 90 bp GTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGCCCACTTCTCCAGCTTaGCCCTCTTGTACTGAATCA +
Preference number: 5 (lower is better)
Translates to: VCVNRHWLDRGNTGARLRPTSPA*PSCTES
Trigger: TGATTCAGTACAAGAGGGCAAAGCTGGAGAAGTGGG...CCGCAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCAACAAGGCCATTGCTATaGAGGTACGGGGCCCACTTC +
Preference number: 5 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLATRPLL*RYGAHF
Trigger: GAAGTGGGCCCCGTACCTCAATAGCAATGGCCTTGT...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp AGCTGGGATTCAGTCCTCAAATTCTGGGGCATGCATCTTAGCCTTCCCCATCCCTCAGGTTGCATGGACTaGTACGAGTGCACGCGCAGA +
Preference number: 5 (lower is better)
Translates to: SWDSVLKFWGMHLSLPHPSGCMD*YECTRR
Trigger: TCTGCGCGTGCACTCGTACAAGTCCATGCAACCTGA...GGGATGGGGAAGGCTAAGATGCATGCCCCAGAATTTGAGGACTGAATCCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGACGGTCCATCTCAGGTaGCATGGACTTGTACGAGTG +
Preference number: 5 (lower is better)
Translates to: GVCVNRHWLDRGNTGARLTVHLR*HGLVRV
Trigger: CACTCGTACAAGTCCATGCAACCTGAGATGGACCGT...CAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGGATAGTACTCTGTCATaGTCCTGGGTGTCTCCTCCC +
Preference number: 5 (lower is better)
Translates to: GVCVNRHWLDRGNTGARLDSTLS*SWVSPP
Trigger: GGGAGGAGACACCCAGGACAATGACAGAGTACTATC...CAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGATTGATGAGCCGCTGCTaGAAGTCGCTGAGGCACTCA +
Preference number: 5 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGLMSRC*KSLRHS
Trigger: TGAGTGCCTCAGCGACTTCAAGCAGCGGCTCATCAA...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGATGAGGTTGGCCTTGTaGATGAGCCGCTGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: GVCVNRHWLDRGNTGARLMRLAL*MSRCLK
Trigger: CTTCAAGCAGCGGCTCATCAACAAGGCCAACCTCAT...CAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGATGGATGAGGTTGGCCTaGTTGATGAGCCGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGWMRLA*LMSRCL
Trigger: CAAGCAGCGGCTCATCAACAAGGCCAACCTCATCCA...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCAAGTTCCTTGTGTCGATaGAGGCGCTGCTCCAGGATG +
Preference number: 5 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLASSLCR*RRCSRM
Trigger: CATCCTGGAGCAGCGCCTCAATCGACACAAGGAACT...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGTTCTTGATGGTCTCCTaGGGCTTCACAGTGAGTGGG +
Preference number: 5 (lower is better)
Translates to: GVCVNRHWLDRGNTGARLFLMVS*GFTVSG
Trigger: CCCACTCACTGTGAAGCCCAAGGAGACCATCAAGAA...CAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000394337.8
CDS TCA 90 bp TGTGATTTTCTGGGAGGCCAGAACATGCAAAGGATGAGCAAAGGATaGGCGTGTGAGAGGAGATTTCTGTGCATGCCCGCAGGCAGGAGC +
Preference number: 5 (lower is better)
Translates to: CDFLGGQNMQRMSKG*ACERRFLCMPAGRS
Trigger: GCTCCTGCCTGCGGGCATGCACAGAAATCTCCTCTCACACGCTCATCCTTTGCTCATCCTTTGCATGTTCTGGCCTCCCAGAAAATCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565609.1
CDS CCA 90 bp ACTGGCGGGAGAAGTTGTCTGCCACCTGCAGCAGGTGTTCCTCCTTaGGTGTGTTGGTTTTGTAGGAAATGGGCAGCTTGGAGATGTCAA +
Preference number: 5 (lower is better)
Translates to: TGGRSCLPPAAGVPP*VCWFCRKWAAWRCQ
Trigger: TTGACATCTCCAAGCTGCCCATTTCCTACAAAACCAACACACCCAAGGAGGAACACCTGCTGCAGGTGGCAGACAACTTCTCCCGCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000563126.5
CDS CCA 90 bp GTCTCAAATGCTTCCGGGGAGATCTCAATCTGCTCCACCCACGAGTaGGGCATGTCGAAGCTCTTATCCTCATCCTCCTTGCCCAGATTT +
Preference number: 5 (lower is better)
Translates to: VSNASGEISICSTHE*GMSKLLSSSSLPRF
Trigger: AAATCTGGGCAAGGAGGATGAGGATAAGAGCTTCGACATGCCCCACTCGTGGGTGGAGCAGATTGAGATCTCCCCGGAAGCATTTGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS CCA 90 bp CTCCCTCAGGACCTCCATTCTGGAGCGTCTCTGGGTGTCTGGAGATaGAATGTCTCCAAAGATCCAGTCTCCTCTTCTATACGGCAGAAC +
Preference number: 5 (lower is better)
Translates to: LPQDLHSGASLGVWR*NVSKDPVSSSIRQN
Trigger: GTTCTGCCGTATAGAAGAGGAGACTGGATCTTTGGAGACATTCCATCTCCAGACACCCAGAGACGCTCCAGAATGGAGGTCCTGAGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000569375.5
CDS CCA 90 bp CACCTTCTCCCTCAGGACCTCCATTCTGGAGCGTCTCTGGGTGTCTaGAGATGGAATGTCTCCAAAGATCCAGTCTCCTCTTCTATACGG +
Preference number: 5 (lower is better)
Translates to: HLLPQDLHSGASLGV*RWNVSKDPVSSSIR
Trigger: CCGTATAGAAGAGGAGACTGGATCTTTGGAGACATTCCATCTCCAGACACCCAGAGACGCTCCAGAATGGAGGTCCTGAGGGAGAAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000569375.5
CDS-3UTR CAA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGTTGTGCTCACGAACTaGGGCACTTCACACTCGTTC +
Preference number: 5 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGVVLTN*GTSHSF
Trigger: GAACGAGTGTGAAGTGCCCAAGTTCGTGAGCACAAC...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CAA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCAACCTTTTCCTCCTTCTaGATGGTCGGCTTGAGAGGG +
Preference number: 5 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLATFSSF*MVGLRG
Trigger: CCCTCTCAAGCCGACCATCAAGAAGGAGGAAAAGGT...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000336825.12
CDS-3UTR CAA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGTTATCCTCATCCTCCTaGCCCAGATTTTCCACATCA +
Preference number: 5 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGLSSSS*PRFSTS
Trigger: TGATGTGGAAAATCTGGGCAAGGAGGATGAGGATAA...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CAA 90 bp GACCTGACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGACCCACTTCTCCAGCTTaGCCCTCTTGTACTGAATCA +
Preference number: 5 (lower is better)
Translates to: DLTFQRREGQEANDRPRGPTSPA*PSCTES
Trigger: TGATTCAGTACAAGAGGGCAAAGCTGGAGAAGTGGG...TCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGTCAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CAA 90 bp AAGAGAAAGGCTGCTGCTGGAGCTTGTGAAGCGCAAGGCACAAATGGCAAATTACGGCTCACAAGGCCATaGCTATTGAGGTACGGGGCC +
Preference number: 5 (lower is better)
Translates to: KRKAAAGACEAQGTNGKLRLTRP*LLRYGA
Trigger: GGCCCCGTACCTCAATAGCAATGGCCTTGTGAGCCG...TAATTTGCCATTTGTGCCTTGCGCTTCACAAGCTCCAGCAGCAGCCTTTCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAACGGTCCATCTCAGGTaGCATGGACTTGTACGAGTG +
Preference number: 5 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGTVHLR*HGLVRV
Trigger: CACTCGTACAAGTCCATGCAACCTGAGATGGACCGT...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCAGGCGTCATGATGATCTaGTTGCCTTTGCTGTCCACC +
Preference number: 5 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLAGVMMI*LPLLST
Trigger: GGTGGACAGCAAAGGCAACAAGATCATCATGACGCC...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAATGAGGTTGGCCTTGTaGATGAGCCGCTGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGMRLAL*MSRCLK
Trigger: CTTCAAGCAGCGGCTCATCAACAAGGCCAACCTCAT...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGATTCTTGATGGTCTCCTaGGGCTTCACAGTGAGTGGG +
Preference number: 5 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGFLMVS*GFTVSG
Trigger: CCCACTCACTGTGAAGCCCAAGGAGACCATCAAGAA...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CAA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGTTGAGATATAACCAGTaGTTTGCAGATGGCTGTGGG +
Preference number: 5 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGLRYNQ*FADGCG
Trigger: CCCACAGCCATCTGCAAACAACTGGTTATATCTCAA...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGTCAAAGATCAAGTCCTaGCAGCAGTTCCAGCAATCC +
Preference number: 5 (lower is better)
Translates to: GVCVNRHWLDRGNTGARLSKIKS*QQFQQS
Trigger: GGATTGCTGGAACTGCTGCAAGGACTTGATCTTTGA...CAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CAA 90 bp GTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGCGGTTATCCTCATCCTCCTaGCCCAGATTTTCCACATCA +
Preference number: 5 (lower is better)
Translates to: VCVNRHWLDRGNTGARLRLSSSS*PRFSTS
Trigger: TGATGTGGAAAATCTGGGCAAGGAGGATGAGGATAA...CCGCAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CAA 90 bp AGGTGCTGTGAAGACCTGACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACGGCGTCATGATGATCTaGTTGCCTTTGCTGTCCACC +
Preference number: 5 (lower is better)
Translates to: RCCEDLTFQRREGQEANDGVMMI*LPLLST
Trigger: GGTGGACAGCAAAGGCAACAAGATCATCATGACGCC...GTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGTCAGGTCTTCACAGCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GGCCATAAGTCTTATTTAATGCAACAATGCTACCCCATTCCACAGATGGGTAAGCTGAGGCACTCATCCTaGAGGCGCACCGCCTGCCAG +
Preference number: 5 (lower is better)
Translates to: GHKSYLMQQCYPIPQMGKLRHSS*RRTACQ
Trigger: CTGGCAGGCGGTGCGCCTCAAGGATGAGTGCCTCAG...CTTACCCATCTGTGGAATGGGGTAGCATTGTTGCATTAAATAAGACTTATGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CAA 90 bp CCCATTCCACAGATGGGTAAGTGGTATCTGGTAAGAGGAGGAGCTGGGATTCAGATGAGGTTGGCCTTGTaGATGAGCCGCTGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: PIPQMGKWYLVRGGAGIQMRLAL*MSRCLK
Trigger: CTTCAAGCAGCGGCTCATCAACAAGGCCAACCTCAT...CTGAATCCCAGCTCCTCCTCTTACCAGATACCACTTACCCATCTGTGGAATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CAA 90 bp TGCATCTTAGCCTTCCCCATCCCACTTGGTGAGGTGGGCCACCCTAGTCACATTTGTGCCTGGTTTGAATaGCTCAGCTTCCCAGATTCT +
Preference number: 5 (lower is better)
Translates to: CILAFPIPLGEVGHPSHICAWFE*LSFPDS
Trigger: AGAATCTGGGAAGCTGAGCAATTCAAACCAGGCACA...AATGTGACTAGGGTGGCCCACCTCACCAAGTGGGATGGGGAAGGCTAAGATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS-3UTR CAA 90 bp AGGTGCTGTGAAGACCTGACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGCAGTGTGCCTGGTTaGAATTGCTCAGCTTCCCAG +
Preference number: 5 (lower is better)
Translates to: RCCEDLTFQRREGQEANDSSVPG*NCSASQ
Trigger: CTGGGAAGCTGAGCAATTCAAACCAGGCACACTGCT...GTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGTCAGGTCTTCACAGCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS TCA 90 bp AAGAACCGCTCTGTGATTTTCTGGGAGGCCAGAACATGCAAAGGATaGGCAAAGGATGAGCGTGTGAGAGGAGATTTCTGTGCATGCCCG +
Preference number: 5 (lower is better)
Translates to: KNRSVIFWEARTCKG*AKDERVRGDFCACP
Trigger: CGGGCATGCACAGAAATCTCCTCTCACACGCTCATCCTTTGCTCATCCTTTGCATGTTCTGGCCTCCCAGAAAATCACAGAGCGGTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565609.1
CDS CCA 90 bp GATATTCCTTGCTCTTCTCATTCCGCTTGGTGTCATAGATGGAGATaGTCAGTGTGTGCGCCGCCTCCTCTTCCTCTCGAAGCTTCAGAA +
Preference number: 5 (lower is better)
Translates to: DIPCSSHSAWCHRWR*SVCAPPPLPLEASE
Trigger: TTCTGAAGCTTCGAGAGGAAGAGGAGGCGGCGCACACACTGACCATCTCCATCTATGACACCAAGCGGAATGAGAAGAGCAAGGAATATC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
ENST00000565609.1
CDS-3UTR CAA 90 bp AGGAAAATCATGAGAAGCAGGAACAAACAGGGCTGTAGGGGAGGTGGGCTGGCATCAAAGATCAAGTCCTaGCAGCAGTTCCAGCAATCC +
Preference number: 5 (lower is better)
Translates to: RKIMRSRNKQGCRGGGLASKIKS*QQFQQS
Trigger: GGATTGCTGGAACTGCTGCAAGGACTTGATCTTTGA...TGCCAGCCCACCTCCCCTACAGCCCTGTTTGTTCCTGCTTCTCATGATTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CAA 90 bp AGAAGAGAAAGGCTGCTGCTGGAGCTTGTGAAGCGCAAGGCACAAATGGCAAATGATAGTACTCTGTCATaGTCCTGGGTGTCTCCTCCC +
Preference number: 5 (lower is better)
Translates to: RRERLLLELVKRKAQMANDSTLS*SWVSPP
Trigger: GGGAGGAGACACCCAGGACAATGACAGAGTACTATC...ATTTGCCATTTGTGCCTTGCGCTTCACAAGCTCCAGCAGCAGCCTTTCTCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GGCCATAAGTCTTATTTAATGCAACAATGCTACCCCATTCCACAGATGGGTAAGCGGGCCTGGATGAGGTaGGCCTTGTTGATGAGCCGC +
Preference number: 5 (lower is better)
Translates to: GHKSYLMQQCYPIPQMGKRAWMR*ALLMSR
Trigger: GCGGCTCATCAACAAGGCCAACCTCATCCAGGCCCG...CTTACCCATCTGTGGAATGGGGTAGCATTGTTGCATTAAATAAGACTTATGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CAA 90 bp AAGAGAAAGGCTGCTGCTGGAGCTTGTGAAGCGCAAGGCACAAATGGCAAATTAAGTTCCTTGTGTCGATaGAGGCGCTGCTCCAGGATG +
Preference number: 5 (lower is better)
Translates to: KRKAAAGACEAQGTNGKLSSLCR*RRCSRM
Trigger: CATCCTGGAGCAGCGCCTCAATCGACACAAGGAACT...TAATTTGCCATTTGTGCCTTGCGCTTCACAAGCTCCAGCAGCAGCCTTTCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CAA 90 bp AGCTGGGATTCAGTCCTCAAATTCTGGGGCATGCATCTTAGCCTTCCCCATCCCGATATAACCAGTTGTTaGCAGATGGCTGTGGGACCA +
Preference number: 5 (lower is better)
Translates to: SWDSVLKFWGMHLSLPHPDITSC*QMAVGP
Trigger: TGGTCCCACAGCCATCTGCAAACAACTGGTTATATC...GGGATGGGGAAGGCTAAGATGCATGCCCCAGAATTTGAGGACTGAATCCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGATATAACCAGTTGTTaGCAGATGGCTGTGGGACCA +
Preference number: 5 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGDITSC*QMAVGP
Trigger: TGGTCCCACAGCCATCTGCAAACAACTGGTTATATC...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGAGCCAGGCTGTTGAGATATAACCAGTaGTTTGCAGATGGCTGTGGG +
Preference number: 5 (lower is better)
Translates to: GVCVNRHWLDRGNTGARLLRYNQ*FADGCG
Trigger: CCCACAGCCATCTGCAAACAACTGGTTATATCTCAA...CAGCCTGGCTCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CAA 90 bp CATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGAGGAAGGGGCCACCCTAGTCACATaGAGATATAACCAGTTGTTT +
Preference number: 5 (lower is better)
Translates to: HSNGEKDRKQTTGQGEEGATLVT*RYNQLF
Trigger: AAACAACTGGTTATATCTCAATGTGACTAGGGTGGC...CCCTTCCTCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS TCA 90 bp GGTCAAAGATCAAGTCCTTGCAGCAGTTCCAGCAATCCTGCATGTTaGTCCAGTAGTTCTTGTGGTTCCACAGGCTTTCGATGCCCAGGA +
Preference number: 5 (lower is better)
Translates to: GQRSSPCSSSSNPAC*SSSSCGSTGFRCPG
Trigger: TCCTGGGCATCGAAAGCCTGTGGAACCACAAGAACTACTGGATCAACATGCAGGATTGCTGGAACTGCTGCAAGGACTTGATCTTTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CAA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGATTATCCTCATCCTCCTaGCCCAGATTTTCCACATCA +
Preference number: 5 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGLSSSS*PRFSTS
Trigger: TGATGTGGAAAATCTGGGCAAGGAGGATGAGGATAA...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS-3UTR CAA 90 bp GGGCTGGCAGTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGTTTATCTCCAAAATATaGGTACACTGCAAGTCCTCA +
Preference number: 5 (lower is better)
Translates to: GLAVRPGVCVNRHWLDRGFISKI*VHCKSS
Trigger: TGAGGACTTGCAGTGTACCAATATTTTGGAGATAAA...CCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCACTGCCAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp AAGAGAAAGGCTGCTGCTGGAGCTTGTGAAGCGCAAGGCACAAATGGCAAATTAATGAGGTTGGCCTTGTaGATGAGCCGCTGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: KRKAAAGACEAQGTNGKLMRLAL*MSRCLK
Trigger: CTTCAAGCAGCGGCTCATCAACAAGGCCAACCTCAT...TAATTTGCCATTTGTGCCTTGCGCTTCACAAGCTCCAGCAGCAGCCTTTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GACCTGACATTCCAACGGAGAGAAGGACAGGAAGCAAACGACAGGCCAAGGGGAGCCACCCTAGTCACATaGAGATATAACCAGTTGTTT +
Preference number: 5 (lower is better)
Translates to: DLTFQRREGQEANDRPRGATLVT*RYNQLF
Trigger: AAACAACTGGTTATATCTCAATGTGACTAGGGTGGC...TCCCCTTGGCCTGTCGTTTGCTTCCTGTCCTTCTCTCCGTTGGAATGTCAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CAA 90 bp CATAAGTCTTATTTAATGCAACAATGCTACCCCATTCCACAGATGGGTAAGTGGCTCAGAGTGAGCTTCTaGACTCGGGGTCCGAAGCTG +
Preference number: 5 (lower is better)
Translates to: HKSYLMQQCYPIPQMGKWLRVSF*TRGPKL
Trigger: CAGCTTCGGACCCCGAGTCAAGAAGCTCACTCTGAG...CCACTTACCCATCTGTGGAATGGGGTAGCATTGTTGCATTAAATAAGACTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GGCCATAAGTCTTATTTAATGCAACAATGCTACCCCATTCCACAGATGGGTAAGTTCCCCTTCTGGTACTaGAGCACAGTGGTCGAGGAG +
Preference number: 5 (lower is better)
Translates to: GHKSYLMQQCYPIPQMGKFPFWY*STVVEE
Trigger: CTCCTCGACCACTGTGCTCAAGTACCAGAAGGGGAA...CTTACCCATCTGTGGAATGGGGTAGCATTGTTGCATTAAATAAGACTTATGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS-3UTR CAA 90 bp GTGAGGCCAGGTGTCTGTGTAAACAGGCATTGGCTGGATAGAGGGAACACAGGATTTATCTCCAAAATATaGGTACACTGCAAGTCCTCA +
Preference number: 5 (lower is better)
Translates to: VRPGVCVNRHWLDRGNTGFISKI*VHCKSS
Trigger: TGAGGACTTGCAGTGTACCAATATTTTGGAGATAAA...TCCTGTGTTCCCTCTATCCAGCCAATGCCTGTTTACACAGACACCTGGCCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GGCCATAAGTCTTATTTAATGCAACAATGCTACCCCATTCCACAGATGGGTAAGACGGTCCATCTCAGGTaGCATGGACTTGTACGAGTG +
Preference number: 5 (lower is better)
Translates to: GHKSYLMQQCYPIPQMGKTVHLR*HGLVRV
Trigger: CACTCGTACAAGTCCATGCAACCTGAGATGGACCGT...CTTACCCATCTGTGGAATGGGGTAGCATTGTTGCATTAAATAAGACTTATGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS CCA 90 bp GTGGTCTTGTTTATGTGTTTCAGCTCCAGCATGTCTTCCCGGTTCTaGTACCACTCCTTTATCTCCAAAATATTGGTACACTGCAAGTCC +
Preference number: 5 (lower is better)
Translates to: VVLFMCFSSSMSSRF*YHSFISKILVHCKS
Trigger: GGACTTGCAGTGTACCAATATTTTGGAGATAAAGGAGTGGTACCAGAACCGGGAAGACATGCTGGAGCTGAAACACATAAACAAGACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS-3UTR CAA 90 bp GGCCATAAGTCTTATTTAATGCAACAATGCTACCCCATTCCACAGATGGGTAAGTCAAAGATCAAGTCCTaGCAGCAGTTCCAGCAATCC +
Preference number: 5 (lower is better)
Translates to: GHKSYLMQQCYPIPQMGKSKIKS*QQFQQS
Trigger: GGATTGCTGGAACTGCTGCAAGGACTTGATCTTTGA...CTTACCCATCTGTGGAATGGGGTAGCATTGTTGCATTAAATAAGACTTATGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS-3UTR CAA 90 bp AGAAGAGAAAGGCTGCTGCTGGAGCTTGTGAAGCGCAAGGCACAAATGGCAAATTTTATCTCCAAAATATaGGTACACTGCAAGTCCTCA +
Preference number: 5 (lower is better)
Translates to: RRERLLLELVKRKAQMANFISKI*VHCKSS
Trigger: TGAGGACTTGCAGTGTACCAATATTTTGGAGATAAA...ATTTGCCATTTGTGCCTTGCGCTTCACAAGCTCCAGCAGCAGCCTTTCTCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000562250.1
CDS GCA 72 bp CTGGATGCGCTCCTCCGCGACCAGAAACACGCGCTCTaGCACGTCCTCCTCCGCGGGCTTCGCTGGGTTGCG +
Preference number: 6 (lower is better)
Translates to: LDALLRDQKHAL*HVLLRGLRWVA
Trigger: CGCAACCCAGCGAAGCCCGCGGAGGAGGACGTGGCAGAGCGCGTGTTTCTGGTCGCGGAGGAGCGCATCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
ENST00000565609.1
CDS TCA 72 bp CCTCGGTGCGCCGCAGGAACTCGCGCTTGGAGGCCGTaGTGTGGTCCTCACGGCAGTGGTAGCGCAGCTGGA +
Preference number: 6 (lower is better)
Translates to: PRCAAGTRAWRP*CGPHGSGSAAG
Trigger: TCCAGCTGCGCTACCACTGCCGTGAGGACCACATCACGGCCTCCAAGCGCGAGTTCCTGCGGCGCACCGAGG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
ENST00000565609.1
CDS GCA 72 bp ACCTCGCGCTTCCCCGATAGCACAAGGACCCAGGAGTaGACCCGCAGGCCGTGCAGGGCATCCGGCTTTGCC +
Preference number: 6 (lower is better)
Translates to: TSRFPDSTRTQE*TRRPCRASGFA
Trigger: GGCAAAGCCGGATGCCCTGCACGGCCTGCGGGTGCACTCCTGGGTCCTTGTGCTATCGGGGAAGCGCGAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000564132.1
CDS CCA 72 bp GGGTGCAGGAAGAGGGGCACGCGGTCCGGGCACAGATaGCTGTACTGGCGGGAGAAGTTGTCTGCCACCTGC +
Preference number: 6 (lower is better)
Translates to: GCRKRGTRSGHR*LYWREKLSATC
Trigger: GCAGGTGGCAGACAACTTCTCCCGCCAGTACAGCCATCTGTGCCCGGACCGCGTGCCCCTCTTCCTGCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000563126.5
CDS CAA 72 bp CGCTCTGCCACGTCCTCCTCCGCGGGCTTCGCTGGGTaGCGGAAGAACCGCTCTGTGATTTTCTGGGAGGCC +
Preference number: 6 (lower is better)
Translates to: RSATSSSAGFAG*RKNRSVIFWEA
Trigger: GGCCTCCCAGAAAATCACAGAGCGGTTCTTCCGCAACCCAGCGAAGCCCGCGGAGGAGGACGTGGCAGAGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565609.1
CDS GCA 72 bp CTCACGAACTTGGGCACTTCACACTCGTTCAGGGGGTaGAGGAAGAGGGGCACGCGGTCCGGGCACAGATGG +
Preference number: 6 (lower is better)
Translates to: LTNLGTSHSFRG*RKRGTRSGHRW
Trigger: CCATCTGTGCCCGGACCGCGTGCCCCTCTTCCTGCACCCCCTGAACGAGTGTGAAGTGCCCAAGTTCGTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS GCA 72 bp GATAGCACAAGGACCCAGGAGTGCACCCGCAGGCCGTaGAGGGCATCCGGCTTTGCCTTCTCCGCTTCCATG +
Preference number: 6 (lower is better)
Translates to: DSTRTQECTRRP*RASGFAFSASM
Trigger: CATGGAAGCGGAGAAGGCAAAGCCGGATGCCCTGCACGGCCTGCGGGTGCACTCCTGGGTCCTTGTGCTATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000564132.1
CDS GCA 72 bp TTCAGCCTTACGGGCACTTCACACTCGTTCAGGGGGTaGAGGAAGAGGGGCACGCGGTCCGGGCACAGATGG +
Preference number: 6 (lower is better)
Translates to: FSLTGTSHSFRG*RKRGTRSGHRW
Trigger: CCATCTGTGCCCGGACCGCGTGCCCCTCTTCCTGCACCCCCTGAACGAGTGTGAAGTGCCCGTAAGGCTGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563126.5
CDS CCA 72 bp AAGAGGGGCACGCGGTCCGGGCACAGATGGCTGTACTaGCGGGAGAAGTTGTCTGCCACCTGCAGCAGGTGT +
Preference number: 6 (lower is better)
Translates to: KRGTRSGHRWLY*REKLSATCSRC
Trigger: ACACCTGCTGCAGGTGGCAGACAACTTCTCCCGCCAGTACAGCCATCTGTGCCCGGACCGCGTGCCCCTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000563126.5
CDS CCA 72 bp CACGCGCTCTGCCACGTCCTCCTCCGCGGGCTTCGCTaGGTTGCGGAAGAACCGCTCTGTGATTTTCTGGGA +
Preference number: 6 (lower is better)
Translates to: HALCHVLLRGLR*VAEEPLCDFLG
Trigger: TCCCAGAAAATCACAGAGCGGTTCTTCCGCAACCCAGCGAAGCCCGCGGAGGAGGACGTGGCAGAGCGCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565609.1
CDS CAA 90 bp AGGGGCACGCGGTCCGGGCACAGATGGCTGTACTGGCGGGAGAAGTaGTCTGCCACCTGCAGCAGGTGTTCCTCCTTGGGTGTGTTGGTT +
Preference number: 6 (lower is better)
Translates to: RGTRSGHRWLYWREK*SATCSRCSSLGVLV
Trigger: AACCAACACACCCAAGGAGGAACACCTGCTGCAGGTGGCAGACAACTTCTCCCGCCAGTACAGCCATCTGTGCCCGGACCGCGTGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000563126.5
CDS CAA 72 bp CGGTCCGGGCACAGATGGCTGTACTGGCGGGAGAAGTaGTCTGCCACCTGCAGCAGGTGTTCCTCCTTGGGT +
Preference number: 6 (lower is better)
Translates to: RSGHRWLYWREK*SATCSRCSSLG
Trigger: ACCCAAGGAGGAACACCTGCTGCAGGTGGCAGACAACTTCTCCCGCCAGTACAGCCATCTGTGCCCGGACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000563126.5
CDS CAA 72 bp CGCTCTGCCACGTCCTCCTCCGCGGGCTTCGCTGGGTaGCGGAAGAACCGCTCTGTGATTTTCACAATGGGC +
Preference number: 6 (lower is better)
Translates to: RSATSSSAGFAG*RKNRSVIFTMG
Trigger: GCCCATTGTGAAAATCACAGAGCGGTTCTTCCGCAACCCAGCGAAGCCCGCGGAGGAGGACGTGGCAGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS CAA 90 bp AGAAACACGCGCTCTGCCACGTCCTCCTCCGCGGGCTTCGCTGGGTaGCGGAAGAACCGCTCTGTGATTTTCACAATGGGCCGGGGGTTT +
Preference number: 6 (lower is better)
Translates to: RNTRSATSSSAGFAG*RKNRSVIFTMGRGF
Trigger: AAACCCCCGGCCCATTGTGAAAATCACAGAGCGGTTCTTCCGCAACCCAGCGAAGCCCGCGGAGGAGGACGTGGCAGAGCGCGTGTTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS CAA 90 bp GGCTCCACCTCGAAGCTGATGCACATGTCGGGCGTCATGATGATCTaGTTGCCTTTGCTGTCCACCTCGGTGCGCCGCAGGAACTCGCGC +
Preference number: 6 (lower is better)
Translates to: GSTSKLMHMSGVMMI*LPLLSTSVRRRNSR
Trigger: GCGCGAGTTCCTGCGGCGCACCGAGGTGGACAGCAAAGGCAACAAGATCATCATGACGCCCGACATGTGCATCAGCTTCGAGGTGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS CAA 90 bp TCAAAGCGGGCCTGGATGAGGTTGGCCTTGTTGATGAGCCGCTGCTaGAAGTCGCTGAGGCACTCATCCTTGAGGCGCACCGCCTGCCAG +
Preference number: 6 (lower is better)
Translates to: SKRAWMRLALLMSRC*KSLRHSSLRRTACQ
Trigger: CTGGCAGGCGGTGCGCCTCAAGGATGAGTGCCTCAGCGACTTCAAGCAGCGGCTCATCAACAAGGCCAACCTCATCCAGGCCCGCTTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
ENST00000565609.1
CDS CAA 90 bp AGAAACACGCGCTCTGCCACGTCCTCCTCCGCGGGCTTCGCTGGGTaGCGGAAGAACCGCTCTGTGATTTTCTGGGAGGCCAGAACATGC +
Preference number: 6 (lower is better)
Translates to: RNTRSATSSSAGFAG*RKNRSVIFWEARTC
Trigger: GCATGTTCTGGCCTCCCAGAAAATCACAGAGCGGTTCTTCCGCAACCCAGCGAAGCCCGCGGAGGAGGACGTGGCAGAGCGCGTGTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565609.1
CDS CAA 90 bp AGGCCCACCTCGAAGCTGATGCACATGTCGGGCGTCATGATGATCTaGTTGCCTTTGCTGTCCACCTCGGTGCGCCGCAGGAACTCGCGC +
Preference number: 6 (lower is better)
Translates to: RPTSKLMHMSGVMMI*LPLLSTSVRRRNSR
Trigger: GCGCGAGTTCCTGCGGCGCACCGAGGTGGACAGCAAAGGCAACAAGATCATCATGACGCCCGACATGTGCATCAGCTTCGAGGTGGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565609.1
CDS GCA 72 bp AAGTCGCTGAGGCACTCATCCTTGAGGCGCACCGCCTaGCAGCATGTTAGTTTCTCTCCTGGCGGGAGCTGG +
Preference number: 6 (lower is better)
Translates to: KSLRHSSLRRTA*QHVSFSPGGSW
Trigger: CCAGCTCCCGCCAGGAGAGAAACTAACATGCTGGCAGGCGGTGCGCCTCAAGGATGAGTGCCTCAGCGACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
ENST00000565609.1
CDS GCA 72 bp CGGGCCTGGATGAGGTTGGCCTTGTTGATGAGCCGCTaGTTGAAGTCGCTGAGGCACTCATCCTTGAGGCGC +
Preference number: 6 (lower is better)
Translates to: RAWMRLALLMSR*LKSLRHSSLRR
Trigger: GCGCCTCAAGGATGAGTGCCTCAGCGACTTCAAGCAGCGGCTCATCAACAAGGCCAACCTCATCCAGGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
ENST00000565609.1
CDS CCA 72 bp CACGCGCTCTGCCACGTCCTCCTCCGCGGGCTTCGCTaGGTTGCGGAAGAACCGCTCTGTGATTTTCACAAT +
Preference number: 6 (lower is better)
Translates to: HALCHVLLRGLR*VAEEPLCDFHN
Trigger: ATTGTGAAAATCACAGAGCGGTTCTTCCGCAACCCAGCGAAGCCCGCGGAGGAGGACGTGGCAGAGCGCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS CCA 72 bp TGTCCCAGTTGTAGAGCTCGGGGTAGGGCATCAGTGTaGGCCGGAGGGTTGTGCTCACGAACTTGGGAGCTC +
Preference number: 6 (lower is better)
Translates to: CPSCRARGRASV*AGGLCSRTWEL
Trigger: GAGCTCCCAAGTTCGTGAGCACAACCCTCCGGCCCACACTGATGCCCTACCCCGAGCTCTACAACTGGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564297.5
CDS CCA 72 bp GCCCTCGTGGCCTGGTGTCTCGCTCTCCCCAAGGTCTaGCTGCCATTGCTTCCCTCTATTCCTATCACCTGC +
Preference number: 6 (lower is better)
Translates to: ALVAWCLALPKV*LPLLPSIPITC
Trigger: GCAGGTGATAGGAATAGAGGGAAGCAATGGCAGCCAGACCTTGGGGAGAGCGAGACACCAGGCCACGAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564132.1
CDS CCA 72 bp TGGAGACGCAGCTATGGAGAAGGTTCAAAGCCCTCGTaGCCTGGTGTCTCGCTCTCCCCAAGGTCTGGCTGC +
Preference number: 6 (lower is better)
Translates to: WRRSYGEGSKPS*PGVSLSPRSGC
Trigger: GCAGCCAGACCTTGGGGAGAGCGAGACACCAGGCCACGAGGGCTTTGAACCTTCTCCATAGCTGCGTCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564132.1
CDS CAA 72 bp AGAGCTCGGGGTAGGGCATCAGTGTGGGCCGGAGGGTaGTGCTCACGAACTTCAGCCTTACGGGCACTTCAC +
Preference number: 6 (lower is better)
Translates to: RARGRASVWAGG*CSRTSALRALH
Trigger: GTGAAGTGCCCGTAAGGCTGAAGTTCGTGAGCACAACCCTCCGGCCCACACTGATGCCCTACCCCGAGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563126.5
CDS CAA 90 bp TCGAAGCTGATGCACATGTCGGGCGTCATGATGATCTTGTTGCCTTaGCTGTCCACCTCGGTGCGCCGCAGGAACTCGCGCTTGGAGGCC +
Preference number: 6 (lower is better)
Translates to: SKLMHMSGVMMILLP*LSTSVRRRNSRLEA
Trigger: GGCCTCCAAGCGCGAGTTCCTGCGGCGCACCGAGGTGGACAGCAAAGGCAACAAGATCATCATGACGCCCGACATGTGCATCAGCTTCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
ENST00000565609.1
CDS CAA 90 bp GCCTTGTTGATGAGCCGCTGCTTGAAGTCGCTGAGGCACTCATCCTaGAGGCGCACCGCCTGCCAGCATGTTAGTTTCTCTCCTGGCGGG +
Preference number: 6 (lower is better)
Translates to: ALLMSRCLKSLRHSS*RRTACQHVSFSPGG
Trigger: CCCGCCAGGAGAGAAACTAACATGCTGGCAGGCGGTGCGCCTCAAGGATGAGTGCCTCAGCGACTTCAAGCAGCGGCTCATCAACAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
ENST00000565609.1
CDS CAA 90 bp TCCAGCACCTCGAAGCTGATGCACATGTCGGGCGTCATGATGATCTaGTTGCCTTTGCTGTCCACCTCGGTGCGCCGCAGGAACTCGCGC +
Preference number: 6 (lower is better)
Translates to: SSTSKLMHMSGVMMI*LPLLSTSVRRRNSR
Trigger: GCGCGAGTTCCTGCGGCGCACCGAGGTGGACAGCAAAGGCAACAAGATCATCATGACGCCCGACATGTGCATCAGCTTCGAGGTGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562250.1
CDS CAA 90 bp CCCACCTCGAAGCTGATGCACATGTCGGGCGTCATGATGATCTTGTaGCCTTTGCTGTCCACCTCGGTGCGCCGCAGGAACTCGCGCTTG +
Preference number: 6 (lower is better)
Translates to: PTSKLMHMSGVMMIL*PLLSTSVRRRNSRL
Trigger: CAAGCGCGAGTTCCTGCGGCGCACCGAGGTGGACAGCAAAGGCAACAAGATCATCATGACGCCCGACATGTGCATCAGCTTCGAGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565609.1
CDS TCA 72 bp CCACAGGACCCTACCTCCAGCTCTGACTCCCAGACCTaGTGTCTGGACAGCTTCTCCTCCCTCTTCAGGTGC +
Preference number: 6 (lower is better)
Translates to: PQDPTSSSDSQT*CLDSFSSLFRC
Trigger: GCACCTGAAGAGGGAGGAGAAGCTGTCCAGACATCAGGTCTGGGAGTCAGAGCTGGAGGTAGGGTCCTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565609.1
CDS GCA 72 bp CGGGCACAGATGGCTGTACTGGCGGGAGAAGTTGTCTaGCACCTGCAGCAGGTGTTCCTCCTTGGGTGTGTT +
Preference number: 6 (lower is better)
Translates to: RAQMAVLAGEVV*HLQQVFLLGCV
Trigger: AACACACCCAAGGAGGAACACCTGCTGCAGGTGGCAGACAACTTCTCCCGCCAGTACAGCCATCTGTGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000563126.5
CDS GCA 72 bp TCCTGGGCTCTGATCTCCTGCTGCTTCTTCACCTCTTaGTCCTGCTCAAACCTGCTGCACAGGTCCCTGGGG +
Preference number: 6 (lower is better)
Translates to: SWALISCCFFTS*SCSNLLHRSLG
Trigger: CCCCAGGGACCTGTGCAGCAGGTTTGAGCAGGAGCAAGAGGTGAAGAAGCAGCAGGAGATCAGAGCCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000564132.1
CDS CCA 72 bp TGTCCCAGTTGTAGAGCTCGGGGTAGGGCATCAGTGTaGGCCGGAGGGTTGTGCTCACGAACTTGGGCACTT +
Preference number: 6 (lower is better)
Translates to: CPSCRARGRASV*AGGLCSRTWAL
Trigger: AAGTGCCCAAGTTCGTGAGCACAACCCTCCGGCCCACACTGATGCCCTACCCCGAGCTCTACAACTGGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS CCA 72 bp CTCCTTCTTGATGGTCTCCTTGGGCTTCACAGTGAGTaGGCACACCTCCCGCGTCAGGTCCATGTGGCACAG +
Preference number: 6 (lower is better)
Translates to: LLLDGLLGLHSE*AHLPRQVHVAQ
Trigger: CTGTGCCACATGGACCTGACGCGGGAGGTGTGCCCACTCACTGTGAAGCCCAAGGAGACCATCAAGAAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000394337.8
CDS CCA 72 bp ACGCAGCTATGGAGAAGGTTCAAAGCCCTCGTGGCCTaGTGTCTCGCTCTCCCCAAGGTCTGGCTGCCATTG +
Preference number: 6 (lower is better)
Translates to: TQLWRRFKALVA*CLALPKVWLPL
Trigger: CAATGGCAGCCAGACCTTGGGGAGAGCGAGACACCAGGCCACGAGGGCTTTGAACCTTCTCCATAGCTGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564132.1
CDS CCA 72 bp TCATGGGCAAGGGAGTGGGCCATGGAGACGCAGCTATaGAGAAGGTTCAAAGCCCTCGTGGCCTGGTGTCTC +
Preference number: 6 (lower is better)
Translates to: SWAREWAMETQL*RRFKALVAWCL
Trigger: GAGACACCAGGCCACGAGGGCTTTGAACCTTCTCCATAGCTGCGTCTCCATGGCCCACTCCCTTGCCCATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564132.1
CDS CAA 72 bp AGAGCTCGGGGTAGGGCATCAGTGTGGGCCGGAGGGTaGTGCTCACGAACTTGGGCACTTCACACTCGTTCA +
Preference number: 6 (lower is better)
Translates to: RARGRASVWAGG*CSRTWALHTRS
Trigger: TGAACGAGTGTGAAGTGCCCAAGTTCGTGAGCACAACCCTCCGGCCCACACTGATGCCCTACCCCGAGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS CAA 72 bp GCCTGGATGAGGTTGGCCTTGTTGATGAGCCGCTGCTaGAAGTCGCTGAGGCACTCATCCTTGAGGCGCACC +
Preference number: 6 (lower is better)
Translates to: AWMRLALLMSRC*KSLRHSSLRRT
Trigger: GGTGCGCCTCAAGGATGAGTGCCTCAGCGACTTCAAGCAGCGGCTCATCAACAAGGCCAACCTCATCCAGGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
ENST00000565609.1
CDS CAA 90 bp GGCGGTAGGAGAGGAAGTCTGGGCGTCCTTGATAGTACTCTGTCATaGTCCTGGGTGTCTCCTCCCGCTTCATCAGGCCATCCACACGGG +
Preference number: 6 (lower is better)
Translates to: GGRRGSLGVLDSTLS*SWVSPPASSGHPHG
Trigger: CCCGTGTGGATGGCCTGATGAAGCGGGAGGAGACACCCAGGACAATGACAGAGTACTATCAAGGACGCCCAGACTTCCTCTCCTACCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS CAA 90 bp TCCACCTCGAAGCTGATGCACATGTCGGGCGTCATGATGATCTTGTaGCCTTTGCTGTCCACCTCGGTGCGCCGCAGGAACTCGCGCTTG +
Preference number: 6 (lower is better)
Translates to: STSKLMHMSGVMMIL*PLLSTSVRRRNSRL
Trigger: CAAGCGCGAGTTCCTGCGGCGCACCGAGGTGGACAGCAAAGGCAACAAGATCATCATGACGCCCGACATGTGCATCAGCTTCGAGGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS CAA 90 bp GGCAGCAGTGTGCCTGGTTTGAATTGCTCAGCTTCCCAGATTCTCTaGCAGCTAGAGGTGGCCCTGCGATGTGACCCGGTTCCCTCCGAG +
Preference number: 6 (lower is better)
Translates to: GSSVPGLNCSASQIL*QLEVALRCDPVPSE
Trigger: CTCGGAGGGAACCGGGTCACATCGCAGGGCCACCTCTAGCTGCAAGAGAATCTGGGAAGCTGAGCAATTCAAACCAGGCACACTGCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360716.8
CDS CAA 90 bp AGCACCTCGAAGCTGATGCACATGTCGGGCGTCATGATGATCTTGTaGCCTTTGCTGTCCACCTCGGTGCGCCGCAGGAACTCGCGCTTG +
Preference number: 6 (lower is better)
Translates to: STSKLMHMSGVMMIL*PLLSTSVRRRNSRL
Trigger: CAAGCGCGAGTTCCTGCGGCGCACCGAGGTGGACAGCAAAGGCAACAAGATCATCATGACGCCCGACATGTGCATCAGCTTCGAGGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562250.1
CDS CAA 90 bp CACACGGGCCGTTTCATAAAACTCAATGACACGGTCCATCTCAGGTaGCATGGACTTGTACGAGTGCACGCGCAGAGCCTGGGGGTGGCC +
Preference number: 6 (lower is better)
Translates to: HTGRFIKLNDTVHLR*HGLVRVHAQSLGVA
Trigger: GGCCACCCCCAGGCTCTGCGCGTGCACTCGTACAAGTCCATGCAACCTGAGATGGACCGTGTCATTGAGTTTTATGAAACGGCCCGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS CAA 90 bp GGGTCCGAAGCTGGCATGGCGGTAGGAGAGGAAGTCTGGGCGTCCTaGATAGTACTCTGTCATTGTCCTGGGTGTCTCCTCCCGCTTCAT +
Preference number: 6 (lower is better)
Translates to: GSEAGMAVGEEVWAS*IVLCHCPGCLLPLH
Trigger: ATGAAGCGGGAGGAGACACCCAGGACAATGACAGAGTACTATCAAGGACGCCCAGACTTCCTCTCCTACCGCCATGCCAGCTTCGGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS TCA 72 bp TACGGGGCCCACTTCTCCAGCTTTGCCCTCTTGTACTaGATCACCTTCTTCCCGTTCGGGCAGCGGGTCTCA +
Preference number: 6 (lower is better)
Translates to: YGAHFSSFALLY*ITFFPFGQRVS
Trigger: TGAGACCCGCTGCCCGAACGGGAAGAAGGTGATTCAGTACAAGAGGGCAAAGCTGGAGAAGTGGGCCCCGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS GCA 72 bp TCGTGGCCTGGTGTCTCGCTCTCCCCAAGGTCTGGCTaGCATTGCTTCCCTCTATTCCTATCACCTGCACTG +
Preference number: 6 (lower is better)
Translates to: SWPGVSLSPRSG*HCFPLFLSPAL
Trigger: CAGTGCAGGTGATAGGAATAGAGGGAAGCAATGGCAGCCAGACCTTGGGGAGAGCGAGACACCAGGCCACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564132.1
CDS CCA 72 bp ACCTTCTCCCTCAGGACCTCCATTCTGGAGCGTCTCTaGGTGTCTGGAGATGGAATGTCTCCCTCCGAGGAC +
Preference number: 6 (lower is better)
Translates to: TFSLRTSILERL*VSGDGMSPSED
Trigger: GTCCTCGGAGGGAGACATTCCATCTCCAGACACCCAGAGACGCTCCAGAATGGAGGTCCTGAGGGAGAAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000394337.8
ENST00000563126.5
ENST00000564297.5
CDS CCA 72 bp GGGTCCGAAGCTGGCATGGCGGTAGGAGAGGAAGTCTaGGCGTCCTTGATAGTACTCTGTCATTGTCCTGGG +
Preference number: 6 (lower is better)
Translates to: GSEAGMAVGEEV*ASLIVLCHCPG
Trigger: CCCAGGACAATGACAGAGTACTATCAAGGACGCCCAGACTTCCTCTCCTACCGCCATGCCAGCTTCGGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS CCA 72 bp CCAGCACCTCCAGCTCTGACTCCCAGACCTGATGTCTaGACAGCTTCTCCTCCCTCTTCAGGTGCATCATGG +
Preference number: 6 (lower is better)
Translates to: PAPPALTPRPDV*TASPPSSGASW
Trigger: CCATGATGCACCTGAAGAGGGAGGAGAAGCTGTCCAGACATCAGGTCTGGGAGTCAGAGCTGGAGGTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS CCA 72 bp TGTCCCAGTTGTAGAGCTCGGGGTAGGGCATCAGTGTaGGCCGGAGGGTTGTGCTCACGAACTTCAGCCTTA +
Preference number: 6 (lower is better)
Translates to: CPSCRARGRASV*AGGLCSRTSAL
Trigger: TAAGGCTGAAGTTCGTGAGCACAACCCTCCGGCCCACACTGATGCCCTACCCCGAGCTCTACAACTGGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563126.5
CDS CCA 72 bp GGTGCATCATGGCCTCGTACTGGTAGAGCAGCTTCTTaGTGTGCTCCATGGGCTCCACCTGGGACAACAACC +
Preference number: 6 (lower is better)
Translates to: GASWPRTGRAAS*CAPWAPPGTTT
Trigger: GGTTGTTGTCCCAGGTGGAGCCCATGGAGCACACCAAGAAGCTGCTCTACCAGTACGAGGCCATGATGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565609.1
CDS CAA 72 bp AACTCAATGACACGGTCCATCTCAGGTTGCATGGACTaGTACGAGTGCACGCGCAGAGCCTGGGGGTGGCCA +
Preference number: 6 (lower is better)
Translates to: NSMTRSISGCMD*YECTRRAWGWP
Trigger: TGGCCACCCCCAGGCTCTGCGCGTGCACTCGTACAAGTCCATGCAACCTGAGATGGACCGTGTCATTGAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS CAA 72 bp TCGAAGCTGATGCACATGTCGGGCGTCATGATGATCTaGTTGCCTTTGCTGTCCACCTCGGTGCGCCGCAGG +
Preference number: 6 (lower is better)
Translates to: SKLMHMSGVMMI*LPLLSTSVRRR
Trigger: CCTGCGGCGCACCGAGGTGGACAGCAAAGGCAACAAGATCATCATGACGCCCGACATGTGCATCAGCTTCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
ENST00000565609.1
CDS CAA 72 bp GTCTCCTTCTCAAAGCGGGCCTGGATGAGGTTGGCCTaGTTGATGAGCCGCTGCTTGAAGTCGCTGAGGCAC +
Preference number: 6 (lower is better)
Translates to: VSFSKRAWMRLA*LMSRCLKSLRH
Trigger: GTGCCTCAGCGACTTCAAGCAGCGGCTCATCAACAAGGCCAACCTCATCCAGGCCCGCTTTGAGAAGGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
ENST00000565609.1
CDS CAA 72 bp TCCTGGGTCTCCTTCTCAAAGCGGGCCTGGATGAGGTaGGCCTTGTTGATGAGCCGCTGCTTGAAGTCGCTG +
Preference number: 6 (lower is better)
Translates to: SWVSFSKRAWMR*ALLMSRCLKSL
Trigger: CAGCGACTTCAAGCAGCGGCTCATCAACAAGGCCAACCTCATCCAGGCCCGCTTTGAGAAGGAGACCCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
ENST00000565609.1
CDS CAA 72 bp GCCTGGTGTCTCGCTCTCCCCAAGGTCTGGCTGCCATaGCTTCCCTCTATTCCTATCACCTGCACTGTGCCT +
Preference number: 6 (lower is better)
Translates to: AWCLALPKVWLP*LPSIPITCTVP
Trigger: AGGCACAGTGCAGGTGATAGGAATAGAGGGAAGCAATGGCAGCCAGACCTTGGGGAGAGCGAGACACCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564132.1
CDS CAA 90 bp TTTTGCAGCTCCTGGGTCTCCTTCTCAAAGCGGGCCTGGATGAGGTaGGCCTTGTTGATGAGCCGCTGCTTGAAGTCGCTGAGGCACTCA +
Preference number: 6 (lower is better)
Translates to: FCSSWVSFSKRAWMR*ALLMSRCLKSLRHS
Trigger: TGAGTGCCTCAGCGACTTCAAGCAGCGGCTCATCAACAAGGCCAACCTCATCCAGGCCCGCTTTGAGAAGGAGACCCAGGAGCTGCAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
ENST00000565609.1
CDS CAA 90 bp GGCAGCAGTGTGCCTGGTTTGAATTGCTCAGCTTCCCAGATTCTCTaGCAGCTAGAGGTGGCCCTGCGATGTGACCCGGTTCTGGCCAAT +
Preference number: 6 (lower is better)
Translates to: GSSVPGLNCSASQIL*QLEVALRCDPVLAN
Trigger: ATTGGCCAGAACCGGGTCACATCGCAGGGCCACCTCTAGCTGCAAGAGAATCTGGGAAGCTGAGCAATTCAAACCAGGCACACTGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569167.1
ENST00000569375.5
CDS TCA 72 bp ACGAGTGCACGCGCAGAGCCTGGGGGTGGCCAGGCTTaGAGTAGTCTGTCTTCAGGTCTGTGGTCTTGTTTA +
Preference number: 6 (lower is better)
Translates to: TSARAEPGGGQA*SSLSSGLWSCL
Trigger: TAAACAAGACCACAGACCTGAAGACAGACTACTTCAAGCCTGGCCACCCCCAGGCTCTGCGCGTGCACTCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS TCA 72 bp AGAATCTCCAGCACCTCCAGCTCTGACTCCCAGACCTaGTGTCTGGACAGCTTCTCCTCCCTCTTCAGGTGC +
Preference number: 6 (lower is better)
Translates to: RISSTSSSDSQT*CLDSFSSLFRC
Trigger: GCACCTGAAGAGGGAGGAGAAGCTGTCCAGACATCAGGTCTGGGAGTCAGAGCTGGAGGTGCTGGAGATTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS GCA 72 bp CAGCGGGTCTCAAATGCTTCCGGGGAGATCTCAATCTaGTCCACCCACGAGTGGGGCATGTCGAAGCTCTTA +
Preference number: 6 (lower is better)
Translates to: QRVSNASGEISI*STHEWGMSKLL
Trigger: TAAGAGCTTCGACATGCCCCACTCGTGGGTGGAGCAGATTGAGATCTCCCCGGAAGCATTTGAGACCCGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS GCA 72 bp TCGGGTGTCAGCGTCACCTGGTTCTCCTGGTACCACTaGTGCTTCTTTTGCAGCTCCTGGGTCTCCTTCTCA +
Preference number: 6 (lower is better)
Translates to: SGVSVTWFSWYH*CFFCSSWVSFS
Trigger: TGAGAAGGAGACCCAGGAGCTGCAAAAGAAGCAGCAGTGGTACCAGGAGAACCAGGTGACGCTGACACCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
ENST00000565609.1
CDS CCA 72 bp GCTTCCGGGGAGATCTCAATCTGCTCCACCCACGAGTaGGGCATGTCGAAGCTCTTATCCTCATCCTCCTTG +
Preference number: 6 (lower is better)
Translates to: ASGEISICSTHE*GMSKLLSSSSL
Trigger: CAAGGAGGATGAGGATAAGAGCTTCGACATGCCCCACTCGTGGGTGGAGCAGATTGAGATCTCCCCGGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS CCA 72 bp TTTTGCAGCTCCTGGGTCTCCTTCTCAAAGCGGGCCTaGATGAGGTTGGCCTTGTTGATGAGCCGCTGCTTG +
Preference number: 6 (lower is better)
Translates to: FCSSWVSFSKRA*MRLALLMSRCL
Trigger: CAAGCAGCGGCTCATCAACAAGGCCAACCTCATCCAGGCCCGCTTTGAGAAGGAGACCCAGGAGCTGCAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
ENST00000565609.1
CDS CCA 72 bp TCTTCATCCTCGGGTGTCAGCGTCACCTGGTTCTCCTaGTACCACTGCTGCTTCTTTTGCAGCTCCTGGGTC +
Preference number: 6 (lower is better)
Translates to: SSSSGVSVTWFS*YHCCFFCSSWV
Trigger: GACCCAGGAGCTGCAAAAGAAGCAGCAGTGGTACCAGGAGAACCAGGTGACGCTGACACCCGAGGATGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
ENST00000565609.1
CDS CCA 72 bp AGGCTGCGGGAAGAGGTTTCCTTTCTCTGGCAGCTCTaGCTGAGGCCCCAGGAGGGACATCAAGCGAATATT +
Preference number: 6 (lower is better)
Translates to: RLREEVSFLWQL*LRPQEGHQANI
Trigger: AATATTCGCTTGATGTCCCTCCTGGGGCCTCAGCCAGAGCTGCCAGAGAAAGGAAACCTCTTCCCGCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
ENST00000565609.1
CDS CCA 72 bp TGTCCCAGTTGTAGAGCTCGGGGTAGGGCATCAGTGTaGGCCGGAGGGTTGTGCTCACGAACTTCCAAAGAT +
Preference number: 6 (lower is better)
Translates to: CPSCRARGRASV*AGGLCSRTSKD
Trigger: ATCTTTGGAAGTTCGTGAGCACAACCCTCCGGCCCACACTGATGCCCTACCCCGAGCTCTACAACTGGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569167.1
CDS CCA 72 bp ATGCCCGCAGGCAGGAGCAACGAACGTTCAGGACACTaGAGTCTGGGGTCGTTTGGCGATTCACGTGGAATA +
Preference number: 6 (lower is better)
Translates to: MPAGRSNERSGH*SLGSFGDSRGI
Trigger: TATTCCACGTGAATCGCCAAACGACCCCAGACTCCAGTGTCCTGAACGTTCGTTGCTCCTGCCTGCGGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565609.1
CDS CCA 72 bp ACCCTACCTCCAGCTCTGACTCCCAGACCTGATGTCTaGACAGCTTCTCCTCCCTCTTCAGGTGCATCATGG +
Preference number: 6 (lower is better)
Translates to: TLPPALTPRPDV*TASPPSSGASW
Trigger: CCATGATGCACCTGAAGAGGGAGGAGAAGCTGTCCAGACATCAGGTCTGGGAGTCAGAGCTGGAGGTAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565609.1
CDS CAA 72 bp ATGAGCCGCTGCTTGAAGTCGCTGAGGCACTCATCCTaGAGGCGCACCGCCTGCCAGCATGTTAGTTTCTCT +
Preference number: 6 (lower is better)
Translates to: MSRCLKSLRHSS*RRTACQHVSFS
Trigger: AGAGAAACTAACATGCTGGCAGGCGGTGCGCCTCAAGGATGAGTGCCTCAGCGACTTCAAGCAGCGGCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
ENST00000565609.1
CDS CAA 72 bp TCCTTCTCAAAGCGGGCCTGGATGAGGTTGGCCTTGTaGATGAGCCGCTGCTTGAAGTCGCTGAGGCACTCA +
Preference number: 6 (lower is better)
Translates to: SFSKRAWMRLAL*MSRCLKSLRHS
Trigger: TGAGTGCCTCAGCGACTTCAAGCAGCGGCTCATCAACAAGGCCAACCTCATCCAGGCCCGCTTTGAGAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
ENST00000565609.1
CDS GCA 72 bp AGATGGCTGTACTGGCGGGAGAAGTTGTCTGCCACCTaGAGCAGGTGTTCCTCCTTGGGTGTGTTGGTTTTG +
Preference number: 6 (lower is better)
Translates to: RWLYWREKLSAT*SRCSSLGVLVL
Trigger: CAAAACCAACACACCCAAGGAGGAACACCTGCTGCAGGTGGCAGACAACTTCTCCCGCCAGTACAGCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000563126.5
CDS GCA 72 bp GCAAAGGATGAGCGTGTGAGAGGAGATTTCTGTGCATaGCCGCAGGCAGGAGCAACGAACGTTCAGGACACT +
Preference number: 6 (lower is better)
Translates to: AKDERVRGDFCA*PQAGATNVQDT
Trigger: AGTGTCCTGAACGTTCGTTGCTCCTGCCTGCGGGCATGCACAGAAATCTCCTCTCACACGCTCATCCTTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565609.1
CDS CCA 72 bp GTCTGGACAGCTTCTCCTCCCTCTTCAGGTGCATCATaGCCTCGTACTGGTAGAGCAGCTTCTTGGTGTGCT +
Preference number: 6 (lower is better)
Translates to: VWTASPPSSGAS*PRTGRAASWCA
Trigger: AGCACACCAAGAAGCTGCTCTACCAGTACGAGGCCATGATGCACCTGAAGAGGGAGGAGAAGCTGTCCAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000565609.1
CDS CCA 72 bp ATGAATTTCCTCGCCGGGATTCACCAGCGCCCATCCTaGTTCTCCCAAGTGGCTGGAATAAGACAGAGAGCC +
Preference number: 6 (lower is better)
Translates to: MNFLAGIHQRPS*FSQVAGIRQRA
Trigger: GGCTCTCTGTCTTATTCCAGCCACTTGGGAGAACCAGGATGGGCGCTGGTGAATCCCGGCGAGGAAATTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565609.1
CDS TCA 72 bp GAACCGCTCTGTGATTTTCACAATGGGCCGGGGGTTTaGCTCTGCACTGCTCAGAGTGAGCTTCTTGACTCG +
Preference number: 6 (lower is better)
Translates to: EPLCDFHNGPGV*LCTAQSELLDS
Trigger: CGAGTCAAGAAGCTCACTCTGAGCAGTGCAGAGTCAAACCCCCGGCCCATTGTGAAAATCACAGAGCGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS TCA 72 bp CTGGGAGGCCAGAACATGCAAAGGATGAGCAAAGGATaGGCGTGTGAGAGGAGATTTCTGTGCATGCCCGCA +
Preference number: 6 (lower is better)
Translates to: LGGQNMQRMSKG*ACERRFLCMPA
Trigger: TGCGGGCATGCACAGAAATCTCCTCTCACACGCTCATCCTTTGCTCATCCTTTGCATGTTCTGGCCTCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565609.1
CDS GCA 72 bp CCTGGGACAACAACCACCTTAGTAACACAGAGAGGCTaGCATGATCGGGGCATAGGACCACCTGGGTTCAAA +
Preference number: 6 (lower is better)
Translates to: PGTTTTLVTQRG*HDRGIGPPGFK
Trigger: TTTGAACCCAGGTGGTCCTATGCCCCGATCATGGCAGCCTCTCTGTGTTACTAAGGTGGTTGTTGTCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565609.1
CDS CCA 72 bp ACCTTCTCCCTCAGGACCTCCATTCTGGAGCGTCTCTaGGTGTCTGGAGATGGAATGTCTCCAAAGATCCAG +
Preference number: 6 (lower is better)
Translates to: TFSLRTSILERL*VSGDGMSPKIQ
Trigger: CTGGATCTTTGGAGACATTCCATCTCCAGACACCCAGAGACGCTCCAGAATGGAGGTCCTGAGGGAGAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000569375.5
CDS TCA 72 bp TTCCTCTCGAAGCTTCAGAATCTCCAGCACCTGAAATaGGAAGTGTTGGAGGGCGTGATGGAGACACCCCTC +
Preference number: 6 (lower is better)
Translates to: FLSKLQNLQHLK*EVLEGVMETPL
Trigger: GAGGGGTGTCTCCATCACGCCCTCCAACACTTCTCATTTCAGGTGCTGGAGATTCTGAAGCTTCGAGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565609.1
CDS GCA 72 bp CGTGCATCATGCGCTCCATGGCCTCCCGATATTCCTTaGTCTTCTCATTCCGCTTGGTGTCATAGATGGAGA +
Preference number: 6 (lower is better)
Translates to: RASCAPWPPDIP*SSHSAWCHRWR
Trigger: TCTCCATCTATGACACCAAGCGGAATGAGAAGAGCAAGGAATATCGGGAGGCCATGGAGCGCATGATGCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
ENST00000565609.1
CDS CCA 72 bp ATCAGAATGGTTATTCATGGGCAAGGGAGTGGGCCATaGAGACGCAGCTATGGAGAAGGTTCAAAGCCCTCG +
Preference number: 6 (lower is better)
Translates to: IRMVIHGQGSGP*RRSYGEGSKPS
Trigger: CGAGGGCTTTGAACCTTCTCCATAGCTGCGTCTCCATGGCCCACTCCCTTGCCCATGAATAACCATTCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564132.1
CDS TCA 72 bp TCAGGCCATCCACACGGGCCGTTTCATAAAACTCAATaGCACGGTCCATCTCAGGTTGCATGGACTTGTACG +
Preference number: 6 (lower is better)
Translates to: SGHPHGPFHKTQ*HGPSQVAWTCT
Trigger: CGTACAAGTCCATGCAACCTGAGATGGACCGTGTCATTGAGTTTTATGAAACGGCCCGTGTGGATGGCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS TCA 72 bp GACAACAACCACCTTAGTAACACAGAGAGGCTGCCATaGTCGGGGCATAGGACCACCTGGGTTCAAATCTAC +
Preference number: 6 (lower is better)
Translates to: DNNHLSNTERLP*SGHRTTWVQIY
Trigger: GTAGATTTGAACCCAGGTGGTCCTATGCCCCGATCATGGCAGCCTCTCTGTGTTACTAAGGTGGTTGTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565609.1
CDS TCA 72 bp CAGATGGGAACTTTTGGTTTTCCCAAAGAGCAAAGATaGATTTCCTCGCCGGGATTCACCAGCGCCCATCCT +
Preference number: 6 (lower is better)
Translates to: QMGTFGFPKEQR*ISSPGFTSAHP
Trigger: AGGATGGGCGCTGGTGAATCCCGGCGAGGAAATTCATCTTTGCTCTTTGGGAAAACCAAAAGTTCCCATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565609.1
CDS CCA 72 bp GACCTCCATTCTGGAGCGTCTCTGGGTGTCTGGAGATaGAATGTCTCCAAAGATCCAGTCTCCTCTTCTATA +
Preference number: 6 (lower is better)
Translates to: DLHSGASLGVWR*NVSKDPVSSSI
Trigger: TATAGAAGAGGAGACTGGATCTTTGGAGACATTCCATCTCCAGACACCCAGAGACGCTCCAGAATGGAGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360716.8
ENST00000569375.5
CDS TCA 72 bp TCAAGTCCTTGCAGCAGTTCCAGCAATCCTGCATGTTaGTCCAGTAGTTCTTGTGGTTCCACAGGCTTTCGA +
Preference number: 6 (lower is better)
Translates to: SSPCSSSSNPAC*SSSSCGSTGFR
Trigger: TCGAAAGCCTGTGGAACCACAAGAACTACTGGATCAACATGCAGGATTGCTGGAACTGCTGCAAGGACTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
CDS TCA 72 bp TCTGTGATTTTCTGGGAGGCCAGAACATGCAAAGGATaGGCAAAGGATGAGCGTGTGAGAGGAGATTTCTGT +
Preference number: 6 (lower is better)
Translates to: SVIFWEARTCKG*AKDERVRGDFC
Trigger: ACAGAAATCTCCTCTCACACGCTCATCCTTTGCTCATCCTTTGCATGTTCTGGCCTCCCAGAAAATCACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565609.1
CDS CCA 72 bp TTTATGTGTTTCAGCTCCAGCATGTCTTCCCGGTTCTaGTACCACTCCTTTATCTCCAAAATATTGGTACAC +
Preference number: 6 (lower is better)
Translates to: FMCFSSSMSSRF*YHSFISKILVH
Trigger: GTGTACCAATATTTTGGAGATAAAGGAGTGGTACCAGAACCGGGAAGACATGCTGGAGCTGAAACACATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336825.12
ENST00000360716.8
ENST00000394337.8
ENST00000562250.1
CDS CAA 72 bp ATTGCTAGACATCCCTTACTGCTAGAAAGAGCTTCTTaGGCATGCTGCCATTACACACAGTTGCCAACTAAT +
Preference number: 6 (lower is better)
Translates to: IARHPLLLERAS*ACCHYTQLPTN
Trigger: ATTAGTTGGCAACTGTGTGTAATGGCAGCATGCCAAAGAAGCTCTTTCTAGCAGTAAGGGATGTCTAGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565609.1