RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DR1 (Homo sapiens)

Ensembl gene IDs: ENSG00000117505

Ensembl transcript IDs: ENST00000370267.1, ENST00000370272.9, ENST00000481583.1

Found 255 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGCCCTGTGATGAAAAGGCATCCTGTCCAGGGTTGGCTCCCACTTTaGTCCCTGAGCTGCTGGGATAGGCTCCAGCTACCCAAGACACTG +
Preference number: 1 (lower is better)
Translates to: RPVMKRHPVQGWLPL*SLSCWDRLQLPKTL
Trigger: CAGTGTCTTGGGTAGCTGGAGCCTATCCCAGCAGCTCAGGGAGCAAAGTGGGAGCCAACCCTGGACAGGATGCCTTTTCATCACAGGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR TCA 90 bp CTGGGTATTCTGGTTTCTTCTCAATTCCCAAAGATGCACGTTAGGTaGATTGGTACAGCTAAATGGTCCCAGTATGCGTGTGTGTGCCGT +
Preference number: 1 (lower is better)
Translates to: LGILVSSQFPKMHVR*IGTAKWSQYACVCR
Trigger: ACGGCACACACACGCATACTGGGACCATTTAGCTGTACCAATTCACCTAACGTGCATCTTTGGGAATTGAGAAGAAACCAGAATACCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR CCA 90 bp GCTATGTCTGGAGACATTTTTGGGTTGTCACAACTGGAAGTAGGGTaGGGAGTGGTGCTAATGACATCAAGTGGGCATAAGCCAATTATG +
Preference number: 1 (lower is better)
Translates to: AMSGDIFGLSQLEVG*GVVLMTSSGHKPIM
Trigger: CATAATTGGCTTATGCCCACTTGATGTCATTAGCACCACTCCCCACCCTACTTCCAGTTGTGACAACCCAAAAATGTCTCCAGACATAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR GCA 90 bp AATGAGGTAGAAAAGCAGCAAGCAGGTACAGAGATTTATAATGGCTaGTCTAGGTCCTATCGGGTAAAGGGATCAGCAGATGTGAAGTCA +
Preference number: 1 (lower is better)
Translates to: NEVEKQQAGTEIYNG*SRSYRVKGSADVKS
Trigger: TGACTTCACATCTGCTGATCCCTTTACCCGATAGGACCTAGAGCAGCCATTATAAATCTCTGTACCTGCTTGCTGCTTTTCTACCTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR CCA 90 bp AGCAAGAAAGAAGACAGTGTTAAGATGGGGAAAGAGGAGGGCTTCTaGGGTACACATAATGCTCTGTGTTTTGATCTGAAGACTAGTATG +
Preference number: 1 (lower is better)
Translates to: SKKEDSVKMGKEEGF*GTHNALCFDLKTSM
Trigger: CATACTAGTCTTCAGATCAAAACACAGAGCATTATGTGTACCCCAGAAGCCCTCCTCTTTCCCCATCTTAACACTGTCTTCTTTCTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR TCA 90 bp TCCCTGAGCTGCTGGGATAGGCTCCAGCTACCCAAGACACTGAACTaGAATAAGCAGGTTGAAAAACGAATGAATACAAATTACTGTAAA +
Preference number: 1 (lower is better)
Translates to: SLSCWDRLQLPKTLN*NKQVEKRMNTNYCK
Trigger: TTTACAGTAATTTGTATTCATTCGTTTTTCAACCTGCTTATTTCAGTTCAGTGTCTTGGGTAGCTGGAGCCTATCCCAGCAGCTCAGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR GCA 90 bp ATGAGTTTTCTCTGGGTATTCTGGTTTCTTCTCAATTCCCAAAGATaGACGTTAGGTGAATTGGTACAGCTAAATGGTCCCAGTATGCGT +
Preference number: 1 (lower is better)
Translates to: MSFLWVFWFLLNSQR*TLGELVQLNGPSMR
Trigger: ACGCATACTGGGACCATTTAGCTGTACCAATTCACCTAACGTGCATCTTTGGGAATTGAGAAGAAACCAGAATACCCAGAGAAAACTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR TCA 90 bp ATTCTCCCTCACAACCTCAATAAAGAGCCAACCCTGCTGATACTTTaGTTTAGGCCTAATGAAACTGATTTTTGGACTTCTGATCTCCAG +
Preference number: 1 (lower is better)
Translates to: ILPHNLNKEPTLLIL*FRPNETDFWTSDLQ
Trigger: CTGGAGATCAGAAGTCCAAAAATCAGTTTCATTAGGCCTAAATCAAAGTATCAGCAGGGTTGGCTCTTTATTGAGGTTGTGAGGGAGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR TCA 90 bp GGCCTCCTCTTTCCAAATCACCTATTTCTTTTAGTCTTTTTGCAGTaGTACTGTGTGTTGCTTCTAACAGAGGTTCAGTTTCACAGCCTT +
Preference number: 1 (lower is better)
Translates to: GLLFPNHLFLLVFLQ*YCVLLLTEVQFHSL
Trigger: AAGGCTGTGAAACTGAACCTCTGTTAGAAGCAACACACAGTATCACTGCAAAAAGACTAAAAGAAATAGGTGATTTGGAAAGAGGAGGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR CCA 90 bp GGAGGTAATGGGTGGTTATTGTTTAATGAATACATAATTTCAGTTTaGGAAGATGAAGAGTTCTGTAGACGGATGGTGGTGGTGGTTGCA +
Preference number: 1 (lower is better)
Translates to: GGNGWLLFNEYIISV*EDEEFCRRMVVVVA
Trigger: TGCAACCACCACCACCATCCGTCTACAGAACTCTTCATCTTCCCAAACTGAAATTATGTATTCATTAAACAATAACCACCCATTACCTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR CCA 90 bp TTTGCATGTCCTCCACATATCTGCATGAGTTTTCTCTGGGTATTCTaGTTTCTTCTCAATTCCCAAAGATGCACGTTAGGTGAATTGGTA +
Preference number: 1 (lower is better)
Translates to: FACPPHICMSFLWVF*FLLNSQRCTLGELV
Trigger: TACCAATTCACCTAACGTGCATCTTTGGGAATTGAGAAGAAACCAGAATACCCAGAGAAAACTCATGCAGATATGTGGAGGACATGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR CCA 90 bp TTTCAGTTTGGGAAGATGAAGAGTTCTGTAGACGGATGGTGGTGGTaGTTGCACAATAGTATGAATATACTTAATGCCACAGAATTGAAC +
Preference number: 1 (lower is better)
Translates to: FQFGKMKSSVDGWWW*LHNSMNILNATELN
Trigger: GTTCAATTCTGTGGCATTAAGTATATTCATACTATTGTGCAACCACCACCACCATCCGTCTACAGAACTCTTCATCTTCCCAAACTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR CCA 90 bp ACTGAATGCTGGTTACCAGAGGCTGAGGAGAGAGGAGGTAATGGGTaGTTATTGTTTAATGAATACATAATTTCAGTTTGGGAAGATGAA +
Preference number: 1 (lower is better)
Translates to: TECWLPEAEERGGNG*LLFNEYIISVWEDE
Trigger: TTCATCTTCCCAAACTGAAATTATGTATTCATTAAACAATAACCACCCATTACCTCCTCTCTCCTCAGCCTCTGGTAACCAGCATTCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR CCA 90 bp CCTGGTATGTTTTCCCCAGTAATTGGAGCATCCTTAGATGCCTTAACAACAAGGGCAACCTCCGCCTTCTaGGTTCAAGAAATCCCCTGC +
Preference number: 2 (lower is better)
Translates to: PGMFSPVIGASLDALTTRATSAF*VQEIPC
Trigger: GCAGGGGATTTCTTGAACCCAGAAGGCGGAGGTTGC...CCTTGTTGTTAAGGCATCTAAGGATGCTCCAATTACTGGGGAAAACATACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR CAA 90 bp ACAGGGTGCAATTTTGCCTCCTATACTCGCAACACCCAGGGACAGTaGGCTATGTCTGGAGACATTTTTGGGTTGTCACAACTGGAAGTA +
Preference number: 2 (lower is better)
Translates to: TGCNFASYTRNTQGQ*AMSGDIFGLSQLEV
Trigger: TACTTCCAGTTGTGACAACCCAAAAATGTCTCCAGACATAGCCAACTGTCCCTGGGTGTTGCGAGTATAGGAGGCAAAATTGCACCCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR TCA 90 bp CCTGGTATGTTTTCCCCAGTAATTGGAGCATCCTTAGATGCCTTAACAACAAGGTCCTTTTGGATTGCTTaGGCCCAGGAGTTTGAGGCT +
Preference number: 2 (lower is better)
Translates to: PGMFSPVIGASLDALTTRSFWIA*AQEFEA
Trigger: AGCCTCAAACTCCTGGGCTCAAGCAATCCAAAAGGA...CCTTGTTGTTAAGGCATCTAAGGATGCTCCAATTACTGGGGAAAACATACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR GCA 90 bp ATGAGTTTTCTCTGGGTATTCTGGTTTCTTCTCAATTCCCAAAGATGCACGTTAAGCTGGGACTACAGGTaGAAGCCACCACCTCTGGCT +
Preference number: 2 (lower is better)
Translates to: MSFLWVFWFLLNSQRCTLSWDYR*KPPPLA
Trigger: AGCCAGAGGTGGTGGCTTGCACCTGTAGTCCCAGCT...TAACGTGCATCTTTGGGAATTGAGAAGAAACCAGAATACCCAGAGAAAACTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR CCA 90 bp ATGAGTTTTCTCTGGGTATTCTGGTTTCTTCTCAATTCCCAAAGATGCACGTTACATCCTGTCCAGGGTTaGCTCCCACTTTGCTCCCTG +
Preference number: 2 (lower is better)
Translates to: MSFLWVFWFLLNSQRCTLHPVQG*LPLCSL
Trigger: CAGGGAGCAAAGTGGGAGCCAACCCTGGACAGGATG...TAACGTGCATCTTTGGGAATTGAGAAGAAACCAGAATACCCAGAGAAAACTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR TCA 90 bp CCTGGTATGTTTTCCCCAGTAATTGGAGCATCCTTAGATGCCTTAACAACAAGGAGGGATCAGCAGATGTaGAGTCAAGAGTCTCCTGTA +
Preference number: 2 (lower is better)
Translates to: PGMFSPVIGASLDALTTRRDQQM*SQESPV
Trigger: TACAGGAGACTCTTGACTTCACATCTGCTGATCCCT...CCTTGTTGTTAAGGCATCTAAGGATGCTCCAATTACTGGGGAAAACATACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR CCA 90 bp GATATCCAGAGTAGTCAATTCATAGAGACTGAATGCTGGTTACCAGAGGCTGAGGAAAAACAGAGGAGGTaGGGTAGGACTTGTGGTCAA +
Preference number: 2 (lower is better)
Translates to: DIQSSQFIETECWLPEAEEKQRR*GRTCGQ
Trigger: TTGACCACAAGTCCTACCCCACCTCCTCTGTTTTTC...CTCAGCCTCTGGTAACCAGCATTCAGTCTCTATGAATTGACTACTCTGGATATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR CCA 90 bp GATATCCAGAGTAGTCAATTCATAGAGACTGAATGCTGGTTACCAGAGGCTGAGTCATTCTCTTCACCCTaGCCGATCCTAACCATGACA +
Preference number: 2 (lower is better)
Translates to: DIQSSQFIETECWLPEAESFSSP*PILTMT
Trigger: TGTCATGGTTAGGATCGGCCAGGGTGAAGAGAATGA...CTCAGCCTCTGGTAACCAGCATTCAGTCTCTATGAATTGACTACTCTGGATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR CCA 90 bp GATATCCAGAGTAGTCAATTCATAGAGACTGAATGCTGGTTACCAGAGGCTGAGGTAGACGGATGGTGGTaGTGGTTGCACAATAGTATG +
Preference number: 2 (lower is better)
Translates to: DIQSSQFIETECWLPEAEVDGWW*WLHNSM
Trigger: CATACTATTGTGCAACCACCACCACCATCCGTCTAC...CTCAGCCTCTGGTAACCAGCATTCAGTCTCTATGAATTGACTACTCTGGATATC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR TCA 90 bp GAAATAGCATACCTCATCTGTTTCAAACTGGGTGTGGCTAACAATGAGGTAGAACCTGCTTTATGCAGGTaGGCCCTAAACTTAGAGGCA +
Preference number: 2 (lower is better)
Translates to: EIAYLICFKLGVANNEVEPALCR*ALNLEA
Trigger: TGCCTCTAAGTTTAGGGCTCACCTGCATAAAGCAGG...TTCTACCTCATTGTTAGCCACACCCAGTTTGAAACAGATGAGGTATGCTATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR TCA 90 bp TACAATTACCTTGCAAAAGCACACAATTTTGCTATCCTCAGGCAGGCTTATAATGGGCCACTGTCTGTGTaGATTTTGCATGTCCTCCAC +
Preference number: 2 (lower is better)
Translates to: YNYLAKAHNFAILRQAYNGPLSV*ILHVLH
Trigger: GTGGAGGACATGCAAAATTCACACAGACAGTGGCCC...ATTATAAGCCTGCCTGAGGATAGCAAAATTGTGTGCTTTTGCAAGGTAATTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR GCA 90 bp CCTGGTATGTTTTCCCCAGTAATTGGAGCATCCTTAGATGCCTTAACAACAAGGGAGATTTATAATGGCTaGTCTAGGTCCTATCGGGTA +
Preference number: 2 (lower is better)
Translates to: PGMFSPVIGASLDALTTREIYNG*SRSYRV
Trigger: TACCCGATAGGACCTAGAGCAGCCATTATAAATCTC...CCTTGTTGTTAAGGCATCTAAGGATGCTCCAATTACTGGGGAAAACATACCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR GCA 90 bp TACAATTACCTTGCAAAAGCACACAATTTTGCTATCCTCAGGCAGGCTTATAATGTTGTCAGGCTGGAGTaGAGTGTCGCGATCTCAACT +
Preference number: 2 (lower is better)
Translates to: YNYLAKAHNFAILRQAYNVVRLE*SVAIST
Trigger: AGTTGAGATCGCGACACTGCACTCCAGCCTGACAAC...ATTATAAGCCTGCCTGAGGATAGCAAAATTGTGTGCTTTTGCAAGGTAATTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR CCA 90 bp CCTGGTATGTTTTCCCCAGTAATTGGAGCATCCTTAGATGCCTTAACAACAAGGACAGTTGGCTATGTCTaGAGACATTTTTGGGTTGTC +
Preference number: 2 (lower is better)
Translates to: PGMFSPVIGASLDALTTRTVGYV*RHFWVV
Trigger: GACAACCCAAAAATGTCTCCAGACATAGCCAACTGT...CCTTGTTGTTAAGGCATCTAAGGATGCTCCAATTACTGGGGAAAACATACCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR CCA 90 bp TACAATTACCTTGCAAAAGCACACAATTTTGCTATCCTCAGGCAGGCTTATAATCCGCAGCACCGACTGTaGGATTGTTTAATGCAGGGT +
Preference number: 2 (lower is better)
Translates to: YNYLAKAHNFAILRQAYNPQHRL*DCLMQG
Trigger: ACCCTGCATTAAACAATCCCACAGTCGGTGCTGCGG...ATTATAAGCCTGCCTGAGGATAGCAAAATTGTGTGCTTTTGCAAGGTAATTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR GCA 90 bp GAAATAGCATACCTCATCTGTTTCAAACTGGGTGTGGCTAACAATGAGGTAGAAGAAATTGGAAGGCAGTaGCTATGCCATCTGAATTGG +
Preference number: 2 (lower is better)
Translates to: EIAYLICFKLGVANNEVEEIGRQ*LCHLNW
Trigger: CCAATTCAGATGGCATAGGCACTGCCTTCCAATTTC...TTCTACCTCATTGTTAGCCACACCCAGTTTGAAACAGATGAGGTATGCTATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR GCA 90 bp GATATCCAGAGTAGTCAATTCATAGAGACTGAATGCTGGTTACCAGAGGCTGAGTGGTTTTCAACAGGGTaGAATTTTGCCTCCTATACT +
Preference number: 2 (lower is better)
Translates to: DIQSSQFIETECWLPEAEWFSTG*NFASYT
Trigger: AGTATAGGAGGCAAAATTGCACCCTGTTGAAAACCA...CTCAGCCTCTGGTAACCAGCATTCAGTCTCTATGAATTGACTACTCTGGATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR GCA 90 bp ATGAGTTTTCTCTGGGTATTCTGGTTTCTTCTCAATTCCCAAAGATGCACGTTAAGGATTTTGCTCTGTTaGCCAGACTGGAGTGCAGTA +
Preference number: 2 (lower is better)
Translates to: MSFLWVFWFLLNSQRCTLRILLC*PDWSAV
Trigger: TACTGCACTCCAGTCTGGGCAACAGAGCAAAATCCT...TAACGTGCATCTTTGGGAATTGAGAAGAAACCAGAATACCCAGAGAAAACTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR CCA 90 bp GAAATAGCATACCTCATCTGTTTCAAACTGGGTGTGGCTAACAATGAGGTAGAAAAGACAGTGTTAAGATaGGGAAAGAGGAGGGCTTCT +
Preference number: 2 (lower is better)
Translates to: EIAYLICFKLGVANNEVEKTVLR*GKRRAS
Trigger: AGAAGCCCTCCTCTTTCCCCATCTTAACACTGTCTT...TTCTACCTCATTGTTAGCCACACCCAGTTTGAAACAGATGAGGTATGCTATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR CCA 90 bp ATGAGTTTTCTCTGGGTATTCTGGTTTCTTCTCAATTCCCAAAGATGCACGTTAACACCCAGGGACAGTTaGCTATGTCTGGAGACATTT +
Preference number: 2 (lower is better)
Translates to: MSFLWVFWFLLNSQRCTLTPRDS*LCLETF
Trigger: AAATGTCTCCAGACATAGCCAACTGTCCCTGGGTGT...TAACGTGCATCTTTGGGAATTGAGAAGAAACCAGAATACCCAGAGAAAACTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR CCA 90 bp CCTGGTATGTTTTCCCCAGTAATTGGAGCATCCTTAGATGCCTTAACAACAAGGTGCATGAGTTTTCTCTaGGTATTCTGGTTTCTTCTC +
Preference number: 2 (lower is better)
Translates to: PGMFSPVIGASLDALTTRCMSFL*VFWFLL
Trigger: GAGAAGAAACCAGAATACCCAGAGAAAACTCATGCA...CCTTGTTGTTAAGGCATCTAAGGATGCTCCAATTACTGGGGAAAACATACCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR CAA 90 bp CAGTTTGGGAAGATGAAGAGTTCTGTAGACGGATGGTGGTGGTGGTaGCACAATAGTATGAATATACTTAATGCCACAGAATTGAACACT +
Preference number: 2 (lower is better)
Translates to: QFGKMKSSVDGWWWW*HNSMNILNATELNT
Trigger: AGTGTTCAATTCTGTGGCATTAAGTATATTCATACTATTGTGCAACCACCACCACCATCCGTCTACAGAACTCTTCATCTTCCCAAACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR CAA 90 bp TGCTGGTTACCAGAGGCTGAGGAGAGAGGAGGTAATGGGTGGTTATaGTTTAATGAATACATAATTTCAGTTTGGGAAGATGAAGAGTTC +
Preference number: 2 (lower is better)
Translates to: CWLPEAEERGGNGWL*FNEYIISVWEDEEF
Trigger: GAACTCTTCATCTTCCCAAACTGAAATTATGTATTCATTAAACAATAACCACCCATTACCTCCTCTCTCCTCAGCCTCTGGTAACCAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR TCA 90 bp GAAATAGCATACCTCATCTGTTTCAAACTGGGTGTGGCTAACAATGAGGTAGAACAGATACTACAGAACTaGACTCTTTCACCAACCCAA +
Preference number: 2 (lower is better)
Translates to: EIAYLICFKLGVANNEVEQILQN*TLSPTQ
Trigger: TTGGGTTGGTGAAAGAGTTCAGTTCTGTAGTATCTG...TTCTACCTCATTGTTAGCCACACCCAGTTTGAAACAGATGAGGTATGCTATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR GCA 90 bp TACAATTACCTTGCAAAAGCACACAATTTTGCTATCCTCAGGCAGGCTTATAATTTTGAGACGAAGTCTTaGTCTGTTGTCAGGCTGGAG +
Preference number: 2 (lower is better)
Translates to: YNYLAKAHNFAILRQAYNFETKS*SVVRLE
Trigger: CTCCAGCCTGACAACAGAGCAAGACTTCGTCTCAAA...ATTATAAGCCTGCCTGAGGATAGCAAAATTGTGTGCTTTTGCAAGGTAATTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR CCA 90 bp GAAATAGCATACCTCATCTGTTTCAAACTGGGTGTGGCTAACAATGAGGTAGAAGTCTGGAGACATTTTTaGGTTGTCACAACTGGAAGT +
Preference number: 2 (lower is better)
Translates to: EIAYLICFKLGVANNEVEVWRHF*VVTTGS
Trigger: ACTTCCAGTTGTGACAACCCAAAAATGTCTCCAGAC...TTCTACCTCATTGTTAGCCACACCCAGTTTGAAACAGATGAGGTATGCTATTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR CCA 90 bp ATGAGTTTTCTCTGGGTATTCTGGTTTCTTCTCAATTCCCAAAGATGCACGTTAGACGGATGGTGGTGGTaGTTGCACAATAGTATGAAT +
Preference number: 2 (lower is better)
Translates to: MSFLWVFWFLLNSQRCTLDGWWW*LHNSMN
Trigger: ATTCATACTATTGTGCAACCACCACCACCATCCGTC...TAACGTGCATCTTTGGGAATTGAGAAGAAACCAGAATACCCAGAGAAAACTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR CCA 90 bp TACAATTACCTTGCAAAAGCACACAATTTTGCTATCCTCAGGCAGGCTTATAATTCTGTAGACGGATGGTaGTGGTGGTTGCACAATAGT +
Preference number: 2 (lower is better)
Translates to: YNYLAKAHNFAILRQAYNSVDGW*WWLHNS
Trigger: ACTATTGTGCAACCACCACCACCATCCGTCTACAGA...ATTATAAGCCTGCCTGAGGATAGCAAAATTGTGTGCTTTTGCAAGGTAATTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR CCA 90 bp TACAATTACCTTGCAAAAGCACACAATTTTGCTATCCTCAGGCAGGCTTATAATATAGAGACTGAATGCTaGTTACCAGAGGCTGAGGAG +
Preference number: 2 (lower is better)
Translates to: YNYLAKAHNFAILRQAYNIETEC*LPEAEE
Trigger: CTCCTCAGCCTCTGGTAACCAGCATTCAGTCTCTAT...ATTATAAGCCTGCCTGAGGATAGCAAAATTGTGTGCTTTTGCAAGGTAATTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR CCA 90 bp CCTGGTATGTTTTCCCCAGTAATTGGAGCATCCTTAGATGCCTTAACAACAAGGTTACCAGTCTATGACTaGACTATCAATACTTACCCT +
Preference number: 2 (lower is better)
Translates to: PGMFSPVIGASLDALTTRLPVYD*TINTYP
Trigger: AGGGTAAGTATTGATAGTCCAGTCATAGACTGGTAA...CCTTGTTGTTAAGGCATCTAAGGATGCTCCAATTACTGGGGAAAACATACCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR GCA 90 bp CCTGGTATGTTTTCCCCAGTAATTGGAGCATCCTTAGATGCCTTAACAACAAGGTACACATTAAAATGGTaGCTTCTTACAGTCACTTTG +
Preference number: 2 (lower is better)
Translates to: PGMFSPVIGASLDALTTRYTLKW*LLTVTL
Trigger: CAAAGTGACTGTAAGAAGGCACCATTTTAATGTGTA...CCTTGTTGTTAAGGCATCTAAGGATGCTCCAATTACTGGGGAAAACATACCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR CCA 90 bp CCTGGTATGTTTTCCCCAGTAATTGGAGCATCCTTAGATGCCTTAACAACAAGGAATACTAACAATGCTTaGTTTGAGAAACCCTGTTCT +
Preference number: 2 (lower is better)
Translates to: PGMFSPVIGASLDALTTRNTNNA*FEKPCS
Trigger: AGAACAGGGTTTCTCAAACCAAGCATTGTTAGTATT...CCTTGTTGTTAAGGCATCTAAGGATGCTCCAATTACTGGGGAAAACATACCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR GCA 90 bp ATGAGTTTTCTCTGGGTATTCTGGTTTCTTCTCAATTCCCAAAGATGCACGTTATTTTTGTTTTTGAACTaGATGGTGGTAGGAGGTGCT +
Preference number: 2 (lower is better)
Translates to: MSFLWVFWFLLNSQRCTLFLFLN*MVVGGA
Trigger: AGCACCTCCTACCACCATGCAGTTCAAAAACAAAAA...TAACGTGCATCTTTGGGAATTGAGAAGAAACCAGAATACCCAGAGAAAACTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR GCA 90 bp TACAATTACCTTGCAAAAGCACACAATTTTGCTATCCTCAGGCAGGCTTATAATTGGAGCATCCTTAGATaGCTTAACAACAAGGACAGT +
Preference number: 2 (lower is better)
Translates to: YNYLAKAHNFAILRQAYNWSILR*LNNKDS
Trigger: ACTGTCCTTGTTGTTAAGGCATCTAAGGATGCTCCA...ATTATAAGCCTGCCTGAGGATAGCAAAATTGTGTGCTTTTGCAAGGTAATTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR CCA 90 bp ATGAGTTTTCTCTGGGTATTCTGGTTTCTTCTCAATTCCCAAAGATGCACGTTAAGGAGTTTGAGGCTATaGTGCATTATGATTATGCCT +
Preference number: 2 (lower is better)
Translates to: MSFLWVFWFLLNSQRCTLRSLRL*CIMIMP
Trigger: AGGCATAATCATAATGCACCATAGCCTCAAACTCCT...TAACGTGCATCTTTGGGAATTGAGAAGAAACCAGAATACCCAGAGAAAACTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR CCA 90 bp TACAATTACCTTGCAAAAGCACACAATTTTGCTATCCTCAGGCAGGCTTATAATTCATCTGTTTCAAACTaGGTGTGGCTAACAATGAGG +
Preference number: 2 (lower is better)
Translates to: YNYLAKAHNFAILRQAYNSSVSN*VWLTMR
Trigger: CCTCATTGTTAGCCACACCCAGTTTGAAACAGATGA...ATTATAAGCCTGCCTGAGGATAGCAAAATTGTGTGCTTTTGCAAGGTAATTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR CAA 90 bp AACAGACATTACCTCTGCTTCCTTAGAATGAGTTCTACAATTACCTaGCAAAAGCACACAATTTTGCTATCCTCAGGCAGGCTTATAATT +
Preference number: 2 (lower is better)
Translates to: NRHYLCFLRMSSTIT*QKHTILLSSGRLII
Trigger: AATTATAAGCCTGCCTGAGGATAGCAAAATTGTGTGCTTTTGCAAGGTAATTGTAGAACTCATTCTAAGGAAGCAGAGGTAATGTCTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR GCA 90 bp AACAATGCTTGGTTTGAGAAACCCTGTTCTAAGGTTTTTCTAAGTTGCTTGATTGGAAGGCAGTGCCTATaGCATCTGAATTGGATAATT +
Preference number: 2 (lower is better)
Translates to: NNAWFEKPCSKVFLSCLIGRQCL*HLNWII
Trigger: AATTATCCAATTCAGATGGCATAGGCACTGCCTTCC...AATCAAGCAACTTAGAAAAACCTTAGAACAGGGTTTCTCAAACCAAGCATTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR TCA 90 bp AACAATGCTTGGTTTGAGAAACCCTGTTCTAAGGTTTTTCTAAGTTGCTTGATTGTACTACATACCAAATaGCCAAAATGTCTTTTGGGC +
Preference number: 2 (lower is better)
Translates to: NNAWFEKPCSKVFLSCLIVLHTK*PKCLLG
Trigger: GCCCAAAAGACATTTTGGTCATTTGGTATGTAGTAC...AATCAAGCAACTTAGAAAAACCTTAGAACAGGGTTTCTCAAACCAAGCATTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR TCA 90 bp AACAATGCTTGGTTTGAGAAACCCTGTTCTAAGGTTTTTCTAAGTTGCTTGATTACCCTGCTGATACTTTaGTTTAGGCCTAATGAAACT +
Preference number: 2 (lower is better)
Translates to: NNAWFEKPCSKVFLSCLITLLIL*FRPNET
Trigger: AGTTTCATTAGGCCTAAATCAAAGTATCAGCAGGGT...AATCAAGCAACTTAGAAAAACCTTAGAACAGGGTTTCTCAAACCAAGCATTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR CCA 90 bp TACAATTACCTTGCAAAAGCACACAATTTTGCTATCCTCAGGCAGGCTTATAATTGCTACACATTAAAATaGTGCCTTCTTACAGTCACT +
Preference number: 2 (lower is better)
Translates to: YNYLAKAHNFAILRQAYNCYTLK*CLLTVT
Trigger: AGTGACTGTAAGAAGGCACCATTTTAATGTGTAGCA...ATTATAAGCCTGCCTGAGGATAGCAAAATTGTGTGCTTTTGCAAGGTAATTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR GCA 72 bp CCTGTCCAGGGTTGGCTCCCACTTTGCTCCCTGAGCTaGTGGGATAGGCTCCAGCTACCCAAGACACTGAAC +
Preference number: 3 (lower is better)
Translates to: PVQGWLPLCSLS*WDRLQLPKTLN
Trigger: GTTCAGTGTCTTGGGTAGCTGGAGCCTATCCCAGCAGCTCAGGGAGCAAAGTGGGAGCCAACCCTGGACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR GCA 72 bp ATGAAAAGGCATCCTGTCCAGGGTTGGCTCCCACTTTaGTCCCTGAGCTGCTGGGATAGGCTCCAGCTACCC +
Preference number: 3 (lower is better)
Translates to: MKRHPVQGWLPL*SLSCWDRLQLP
Trigger: GGGTAGCTGGAGCCTATCCCAGCAGCTCAGGGAGCAAAGTGGGAGCCAACCCTGGACAGGATGCCTTTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR CCA 72 bp GGAGACATTTTTGGGTTGTCACAACTGGAAGTAGGGTaGGGAGTGGTGCTAATGACATCAAGTGGGCATAAG +
Preference number: 3 (lower is better)
Translates to: GDIFGLSQLEVG*GVVLMTSSGHK
Trigger: CTTATGCCCACTTGATGTCATTAGCACCACTCCCCACCCTACTTCCAGTTGTGACAACCCAAAAATGTCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR GCA 72 bp AACCTAGATGATCTAAGGTGGTGGTTTTCAACAGGGTaGAATTTTGCCTCCTATACTCGCAACACCCAGGGA +
Preference number: 3 (lower is better)
Translates to: NLDDLRWWFSTG*NFASYTRNTQG
Trigger: TCCCTGGGTGTTGCGAGTATAGGAGGCAAAATTGCACCCTGTTGAAAACCACCACCTTAGATCATCTAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR CCA 72 bp ATTTTGCCTCCTATACTCGCAACACCCAGGGACAGTTaGCTATGTCTGGAGACATTTTTGGGTTGTCACAAC +
Preference number: 3 (lower is better)
Translates to: ILPPILATPRDS*LCLETFLGCHN
Trigger: GTTGTGACAACCCAAAAATGTCTCCAGACATAGCCAACTGTCCCTGGGTGTTGCGAGTATAGGAGGCAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR CAA 90 bp CCTGGTATGTTTTCCCCAGTAATTGGAGCATCCTTAGATGCCTTAACAACAAGGGGACTTGTGGTCAAATaGTTGGGGACAGAGGCAAAA +
Preference number: 3 (lower is better)
Translates to: PGMFSPVIGASLDALTTRGLVVK*LGTEAK
Trigger: TTTTGCCTCTGTCCCCAACAATTTGACCACAAGTCC...CCTTGTTGTTAAGGCATCTAAGGATGCTCCAATTACTGGGGAAAACATACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR GCA 72 bp GAAAAGCAGCAAGCAGGTACAGAGATTTATAATGGCTaGTCTAGGTCCTATCGGGTAAAGGGATCAGCAGAT +
Preference number: 3 (lower is better)
Translates to: EKQQAGTEIYNG*SRSYRVKGSAD
Trigger: ATCTGCTGATCCCTTTACCCGATAGGACCTAGAGCAGCCATTATAAATCTCTGTACCTGCTTGCTGCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR CCA 72 bp GAAGACAGTGTTAAGATGGGGAAAGAGGAGGGCTTCTaGGGTACACATAATGCTCTGTGTTTTGATCTGAAG +
Preference number: 3 (lower is better)
Translates to: EDSVKMGKEEGF*GTHNALCFDLK
Trigger: CTTCAGATCAAAACACAGAGCATTATGTGTACCCCAGAAGCCCTCCTCTTTCCCCATCTTAACACTGTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR CAA 90 bp GATATCCAGAGTAGTCAATTCATAGAGACTGAATGCTGGTTACCAGAGGCTGAGTGTCTGGAGACATTTTaGGGTTGTCACAACTGGAAG +
Preference number: 3 (lower is better)
Translates to: DIQSSQFIETECWLPEAECLETF*GCHNWK
Trigger: CTTCCAGTTGTGACAACCCAAAAATGTCTCCAGACA...CTCAGCCTCTGGTAACCAGCATTCAGTCTCTATGAATTGACTACTCTGGATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR TCA 72 bp CTGGTTTCTTCTCAATTCCCAAAGATGCACGTTAGGTaGATTGGTACAGCTAAATGGTCCCAGTATGCGTGT +
Preference number: 3 (lower is better)
Translates to: LVSSQFPKMHVR*IGTAKWSQYAC
Trigger: ACACGCATACTGGGACCATTTAGCTGTACCAATTCACCTAACGTGCATCTTTGGGAATTGAGAAGAAACCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR GCA 72 bp CTCTGGGTATTCTGGTTTCTTCTCAATTCCCAAAGATaGACGTTAGGTGAATTGGTACAGCTAAATGGTCCC +
Preference number: 3 (lower is better)
Translates to: LWVFWFLLNSQR*TLGELVQLNGP
Trigger: GGGACCATTTAGCTGTACCAATTCACCTAACGTGCATCTTTGGGAATTGAGAAGAAACCAGAATACCCAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR CAA 90 bp CCTGGTATGTTTTCCCCAGTAATTGGAGCATCCTTAGATGCCTTAACAACAAGGGGATGGTGGTGGTGGTaGCACAATAGTATGAATATA +
Preference number: 3 (lower is better)
Translates to: PGMFSPVIGASLDALTTRGWWWW*HNSMNI
Trigger: TATATTCATACTATTGTGCAACCACCACCACCATCC...CCTTGTTGTTAAGGCATCTAAGGATGCTCCAATTACTGGGGAAAACATACCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR TCA 72 bp TCCAAAGATAGCCAGCGTATGAATCCCTGGAACCTGTaGATGTCACTTATATGGCAAAAGAGATTCTGCAGA +
Preference number: 3 (lower is better)
Translates to: SKDSQRMNPWNL*MSLIWQKRFCR
Trigger: TCTGCAGAATCTCTTTTGCCATATAAGTGACATTCACAGGTTCCAGGGATTCATACGCTGGCTATCTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR TCA 72 bp CATGCAACAATAAGAATGGATCTCACTTTGGCAGGTTaGATAACGGCCTCCAAAGATAGCCAGCGTATGAAT +
Preference number: 3 (lower is better)
Translates to: HATIRMDLTLAG*ITASKDSQRMN
Trigger: ATTCATACGCTGGCTATCTTTGGAGGCCGTTATTCAACCTGCCAAAGTGAGATCCATTCTTATTGTTGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR GCA 72 bp TTAGATATCCAGAGTAGTCAATTCATAGAGACTGAATaGTGGTTACCAGAGGCTGAGGAGAGAGGAGGTAAT +
Preference number: 3 (lower is better)
Translates to: LDIQSSQFIETE*WLPEAEERGGN
Trigger: ATTACCTCCTCTCTCCTCAGCCTCTGGTAACCAGCATTCAGTCTCTATGAATTGACTACTCTGGATATCTAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR GCA 72 bp TGGTATGTTTTCCCCAGTAATTGGAGCATCCTTAGATaGCTTAACAACAAGGACAGTTTCTCCATCCTTTGC +
Preference number: 3 (lower is better)
Translates to: WYVFPSNWSILR*LNNKDSFSILC
Trigger: GCAAAGGATGGAGAAACTGTCCTTGTTGTTAAGGCATCTAAGGATGCTCCAATTACTGGGGAAAACATACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR CCA 72 bp GGGAAGATGAAGAGTTCTGTAGACGGATGGTGGTGGTaGTTGCACAATAGTATGAATATACTTAATGCCACA +
Preference number: 3 (lower is better)
Translates to: GKMKSSVDGWWW*LHNSMNILNAT
Trigger: TGTGGCATTAAGTATATTCATACTATTGTGCAACCACCACCACCATCCGTCTACAGAACTCTTCATCTTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR CAA 90 bp ATGAGTTTTCTCTGGGTATTCTGGTTTCTTCTCAATTCCCAAAGATGCACGTTATCTCACTTTGGCAGGTaGAATAACGGCCTCCAAAGA +
Preference number: 3 (lower is better)
Translates to: MSFLWVFWFLLNSQRCTLSHFGR*NNGLQR
Trigger: TCTTTGGAGGCCGTTATTCAACCTGCCAAAGTGAGA...TAACGTGCATCTTTGGGAATTGAGAAGAAACCAGAATACCCAGAGAAAACTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR CAA 90 bp TACAATTACCTTGCAAAAGCACACAATTTTGCTATCCTCAGGCAGGCTTATAATCTTGAGCCCAGGAGTTaGAGGCTATGGTGCATTATG +
Preference number: 3 (lower is better)
Translates to: YNYLAKAHNFAILRQAYNLEPRS*RLWCIM
Trigger: CATAATGCACCATAGCCTCAAACTCCTGGGCTCAAG...ATTATAAGCCTGCCTGAGGATAGCAAAATTGTGTGCTTTTGCAAGGTAATTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR CAA 90 bp ATGAGTTTTCTCTGGGTATTCTGGTTTCTTCTCAATTCCCAAAGATGCACGTTATTTCCTCCTTTTGGATaGCTTGAGCCCAGGAGTTTG +
Preference number: 3 (lower is better)
Translates to: MSFLWVFWFLLNSQRCTLFPPFG*LEPRSL
Trigger: CAAACTCCTGGGCTCAAGCAATCCAAAAGGAGGAAA...TAACGTGCATCTTTGGGAATTGAGAAGAAACCAGAATACCCAGAGAAAACTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR TCA 72 bp TGCTGGGATAGGCTCCAGCTACCCAAGACACTGAACTaGAATAAGCAGGTTGAAAAACGAATGAATACAAAT +
Preference number: 3 (lower is better)
Translates to: CWDRLQLPKTLN*NKQVEKRMNTN
Trigger: ATTTGTATTCATTCGTTTTTCAACCTGCTTATTTCAGTTCAGTGTCTTGGGTAGCTGGAGCCTATCCCAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR GCA 72 bp ACTGTCTGTGTGAATTTTGCATGTCCTCCACATATCTaGATGAGTTTTCTCTGGGTATTCTGGTTTCTTCTC +
Preference number: 3 (lower is better)
Translates to: TVCVNFACPPHI*MSFLWVFWFLL
Trigger: GAGAAGAAACCAGAATACCCAGAGAAAACTCATGCAGATATGTGGAGGACATGCAAAATTCACACAGACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR CCA 72 bp TTTGGGAAGATGAAGAGTTCTGTAGACGGATGGTGGTaGTGGTTGCACAATAGTATGAATATACTTAATGCC +
Preference number: 3 (lower is better)
Translates to: FGKMKSSVDGWW*WLHNSMNILNA
Trigger: GGCATTAAGTATATTCATACTATTGTGCAACCACCACCACCATCCGTCTACAGAACTCTTCATCTTCCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR CAA 90 bp ATGAGTTTTCTCTGGGTATTCTGGTTTCTTCTCAATTCCCAAAGATGCACGTTAAAAAGTTTCCTCCTTTaGGATTGCTTGAGCCCAGGA +
Preference number: 3 (lower is better)
Translates to: MSFLWVFWFLLNSQRCTLKSFLL*DCLSPG
Trigger: TCCTGGGCTCAAGCAATCCAAAAGGAGGAAACTTTT...TAACGTGCATCTTTGGGAATTGAGAAGAAACCAGAATACCCAGAGAAAACTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR CAA 90 bp TACAATTACCTTGCAAAAGCACACAATTTTGCTATCCTCAGGCAGGCTTATAATGCACCGACTGTGGGATaGTTTAATGCAGGGTTTATC +
Preference number: 3 (lower is better)
Translates to: YNYLAKAHNFAILRQAYNAPTVG*FNAGFI
Trigger: GATAAACCCTGCATTAAACAATCCCACAGTCGGTGC...ATTATAAGCCTGCCTGAGGATAGCAAAATTGTGTGCTTTTGCAAGGTAATTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR CCA 72 bp CAGTTTGGGAAGATGAAGAGTTCTGTAGACGGATGGTaGTGGTGGTTGCACAATAGTATGAATATACTTAAT +
Preference number: 3 (lower is better)
Translates to: QFGKMKSSVDGW*WWLHNSMNILN
Trigger: ATTAAGTATATTCATACTATTGTGCAACCACCACCACCATCCGTCTACAGAACTCTTCATCTTCCCAAACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR CCA 72 bp TTTCAGTTTGGGAAGATGAAGAGTTCTGTAGACGGATaGTGGTGGTGGTTGCACAATAGTATGAATATACTT +
Preference number: 3 (lower is better)
Translates to: FQFGKMKSSVDG*WWWLHNSMNIL
Trigger: AAGTATATTCATACTATTGTGCAACCACCACCACCATCCGTCTACAGAACTCTTCATCTTCCCAAACTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR CAA 90 bp ATGAGTTTTCTCTGGGTATTCTGGTTTCTTCTCAATTCCCAAAGATGCACGTTAGACTCAAACAGTTATTaGTATACCCACGTTCACAGA +
Preference number: 3 (lower is better)
Translates to: MSFLWVFWFLLNSQRCTLDSNSY*YTHVHR
Trigger: TCTGTGAACGTGGGTATACAAATAACTGTTTGAGTC...TAACGTGCATCTTTGGGAATTGAGAAGAAACCAGAATACCCAGAGAAAACTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR TCA 72 bp CACAACCTCAATAAAGAGCCAACCCTGCTGATACTTTaGTTTAGGCCTAATGAAACTGATTTTTGGACTTCT +
Preference number: 3 (lower is better)
Translates to: HNLNKEPTLLIL*FRPNETDFWTS
Trigger: AGAAGTCCAAAAATCAGTTTCATTAGGCCTAAATCAAAGTATCAGCAGGGTTGGCTCTTTATTGAGGTTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR TCA 72 bp TTCTCCCTCACAACCTCAATAAAGAGCCAACCCTGCTaGTACTTTGATTTAGGCCTAATGAAACTGATTTTT +
Preference number: 3 (lower is better)
Translates to: FSLTTSIKSQPC*YFDLGLMKLIF
Trigger: AAAAATCAGTTTCATTAGGCCTAAATCAAAGTATCAGCAGGGTTGGCTCTTTATTGAGGTTGTGAGGGAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR CAA 90 bp ATGAGTTTTCTCTGGGTATTCTGGTTTCTTCTCAATTCCCAAAGATGCACGTTACTTTCCCTATTTCAATaGCGAATATACAGATCTGTG +
Preference number: 3 (lower is better)
Translates to: MSFLWVFWFLLNSQRCTLLSLFQ*RIYRSV
Trigger: CACAGATCTGTATATTCGCAATTGAAATAGGGAAAG...TAACGTGCATCTTTGGGAATTGAGAAGAAACCAGAATACCCAGAGAAAACTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR CCA 72 bp ATTTTTAATGGTGTGCCTGTGTTACCAGTCTATGACTaGACTATCAATACTTACCCTCACAGAGGAAATAAA +
Preference number: 3 (lower is better)
Translates to: IFNGVPVLPVYD*TINTYPHRGNK
Trigger: TTTATTTCCTCTGTGAGGGTAAGTATTGATAGTCCAGTCATAGACTGGTAACACAGGCACACCATTAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR CAA 90 bp TACAATTACCTTGCAAAAGCACACAATTTTGCTATCCTCAGGCAGGCTTATAATTATTTGTGTACTGTTTaGTGTGTGTGTGGTATATGC +
Preference number: 3 (lower is better)
Translates to: YNYLAKAHNFAILRQAYNYLCTV*CVCGIC
Trigger: GCATATACCACACACACACAAAACAGTACACAAATA...ATTATAAGCCTGCCTGAGGATAGCAAAATTGTGTGCTTTTGCAAGGTAATTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR-3UTR CAA 90 bp TACAATTACCTTGCAAAAGCACACAATTTTGCTATCCTCAGGCAGGCTTATAATCTTCTTACAGTCACTTaGGAAAACTGTTTGACAGTA +
Preference number: 3 (lower is better)
Translates to: YNYLAKAHNFAILRQAYNLLTVT*ENCLTV
Trigger: TACTGTCAAACAGTTTTCCAAAGTGACTGTAAGAAG...ATTATAAGCCTGCCTGAGGATAGCAAAATTGTGTGCTTTTGCAAGGTAATTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR TCA 72 bp CCAAAAAGCAGAAGCAACCCAGTGTCCATTAATGGATaGACTGATAAACAAAATACGGTATTTACATACTAC +
Preference number: 3 (lower is better)
Translates to: PKSRSNPVSING*TDKQNTVFTYY
Trigger: GTAGTATGTAAATACCGTATTTTGTTTATCAGTTCATCCATTAATGGACACTGGGTTGCTTCTGCTTTTTGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR GCA 72 bp AAAAAGGGAGCTGAAAATAGTAACAGACATTACCTCTaGTTCCTTAGAATGAGTTCTACAATTACCTTGCAA +
Preference number: 3 (lower is better)
Translates to: KKGAENSNRHYL*FLRMSSTITLQ
Trigger: TTGCAAGGTAATTGTAGAACTCATTCTAAGGAAGCAGAGGTAATGTCTGTTACTATTTTCAGCTCCCTTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR GCA 90 bp CCTGGTATGTTTTCCCCAGTAATTGGAGCATCCTTAGATGCCTTAACAACAAGGGGGAGTCGCAGTGGCTaGCGCCGTGGCCGCGTAGCC +
Preference number: 4 (lower is better)
Translates to: PGMFSPVIGASLDALTTRGSRSG*RRGRVA
Trigger: GGCTACGCGGCCACGGCGGCAGCCACTGCGACTCCC...CCTTGTTGTTAAGGCATCTAAGGATGCTCCAATTACTGGGGAAAACATACCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CCA 90 bp GATATCCAGAGTAGTCAATTCATAGAGACTGAATGCTGGTTACCAGAGGCTGAGTGCCGCTGCCGCTGCTaGAACGGCGACGGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: DIQSSQFIETECWLPEAECRCRC*NGDGRL
Trigger: CAGGCGGCCGTCGCCGTTCCAGCAGCGGCAGCGGCA...CTCAGCCTCTGGTAACCAGCATTCAGTCTCTATGAATTGACTACTCTGGATATC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CCA 90 bp GATATCCAGAGTAGTCAATTCATAGAGACTGAATGCTGGTTACCAGAGGCTGAGAAGATCCAGGGGCACTaGCCTCGCCGCGGTACCGGG +
Preference number: 4 (lower is better)
Translates to: DIQSSQFIETECWLPEAEKIQGH*PRRGTG
Trigger: CCCGGTACCGCGGCGAGGCCAGTGCCCCTGGATCTT...CTCAGCCTCTGGTAACCAGCATTCAGTCTCTATGAATTGACTACTCTGGATATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CCA 90 bp GAAATAGCATACCTCATCTGTTTCAAACTGGGTGTGGCTAACAATGAGGTAGAACAGTGGGAGTCGCAGTaGCTGCCGCCGTGGCCGCGT +
Preference number: 4 (lower is better)
Translates to: EIAYLICFKLGVANNEVEQWESQ*LPPWPR
Trigger: ACGCGGCCACGGCGGCAGCCACTGCGACTCCCACTG...TTCTACCTCATTGTTAGCCACACCCAGTTTGAAACAGATGAGGTATGCTATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CCA 90 bp GATATCCAGAGTAGTCAATTCATAGAGACTGAATGCTGGTTACCAGAGGCTGAGCAGAGCCAGGCACAGTaGGAGTCGCAGTGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: DIQSSQFIETECWLPEAEQSQAQ*ESQWLP
Trigger: CGGCAGCCACTGCGACTCCCACTGTGCCTGGCTCTG...CTCAGCCTCTGGTAACCAGCATTCAGTCTCTATGAATTGACTACTCTGGATATC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CCA 90 bp CCTGGTATGTTTTCCCCAGTAATTGGAGCATCCTTAGATGCCTTAACAACAAGGTGCTCCCTGAGCTGCTaGGATAGGCTCCAGCTACCC +
Preference number: 4 (lower is better)
Translates to: PGMFSPVIGASLDALTTRCSLSC*DRLQLP
Trigger: GGGTAGCTGGAGCCTATCCCAGCAGCTCAGGGAGCA...CCTTGTTGTTAAGGCATCTAAGGATGCTCCAATTACTGGGGAAAACATACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR TCA 90 bp CCTGGTATGTTTTCCCCAGTAATTGGAGCATCCTTAGATGCCTTAACAACAAGGCGTGTGTGTGCCGTGTaGGTGCGCCCTGTGATGAAA +
Preference number: 4 (lower is better)
Translates to: PGMFSPVIGASLDALTTRRVCAV*VRPVMK
Trigger: TTTCATCACAGGGCGCACTCACACGGCACACACACG...CCTTGTTGTTAAGGCATCTAAGGATGCTCCAATTACTGGGGAAAACATACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR GCA 90 bp CCTGGTATGTTTTCCCCAGTAATTGGAGCATCCTTAGATGCCTTAACAACAAGGATGCCAGGGAAGGTTTaGAGGAAGCCGCTCCCGACA +
Preference number: 4 (lower is better)
Translates to: PGMFSPVIGASLDALTTRMPGKV*RKPLPT
Trigger: TGTCGGGAGCGGCTTCCTGCAAACCTTCCCTGGCAT...CCTTGTTGTTAAGGCATCTAAGGATGCTCCAATTACTGGGGAAAACATACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR GCA 90 bp AACAATGCTTGGTTTGAGAAACCCTGTTCTAAGGTTTTTCTAAGTTGCTTGATTCAACATGTCCGCCGCTaGCGCTGCCGCTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: NNAWFEKPCSKVFLSCLIQHVRR*RCRCRC
Trigger: GCAGCGGCAGCGGCAGCGGCAGCGGCGGACATGTTG...AATCAAGCAACTTAGAAAAACCTTAGAACAGGGTTTCTCAAACCAAGCATTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CCA 90 bp AACAATGCTTGGTTTGAGAAACCCTGTTCTAAGGTTTTTCTAAGTTGCTTGATTCAGTGGCTGCCGCCGTaGCCGCGTAGCCCGAACGCA +
Preference number: 4 (lower is better)
Translates to: NNAWFEKPCSKVFLSCLIQWLPP*PRSPNA
Trigger: TGCGTTCGGGCTACGCGGCCACGGCGGCAGCCACTG...AATCAAGCAACTTAGAAAAACCTTAGAACAGGGTTTCTCAAACCAAGCATTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CCA 90 bp CCTGGTATGTTTTCCCCAGTAATTGGAGCATCCTTAGATGCCTTAACAACAAGGCAGGCTGGAATGCAGTaGTACCATCACGGCTCACCG +
Preference number: 4 (lower is better)
Translates to: PGMFSPVIGASLDALTTRQAGMQ*YHHGSP
Trigger: CGGTGAGCCGTGATGGTACCACTGCATTCCAGCCTG...CCTTGTTGTTAAGGCATCTAAGGATGCTCCAATTACTGGGGAAAACATACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR TCA 90 bp AACAATGCTTGGTTTGAGAAACCCTGTTCTAAGGTTTTTCTAAGTTGCTTGATTGAGCACAGCCCAGGCTaGGGAGGGGAAAGCGCGGTG +
Preference number: 4 (lower is better)
Translates to: NNAWFEKPCSKVFLSCLIEHSPG*GGESAV
Trigger: CACCGCGCTTTCCCCTCCTCAGCCTGGGCTGTGCTC...AATCAAGCAACTTAGAAAAACCTTAGAACAGGGTTTCTCAAACCAAGCATTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CCA 90 bp GATATCCAGAGTAGTCAATTCATAGAGACTGAATGCTGGTTACCAGAGGCTGAGGCTCTGTTGTCAGGCTaGAGTGCAGTGTCGCGATCT +
Preference number: 4 (lower is better)
Translates to: DIQSSQFIETECWLPEAEALLSG*SAVSRS
Trigger: AGATCGCGACACTGCACTCCAGCCTGACAACAGAGC...CTCAGCCTCTGGTAACCAGCATTCAGTCTCTATGAATTGACTACTCTGGATATC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR CAA 72 bp GTACCATCACGGCTCACCGCAGCACCGACTGTGGGATaGTTTAATGCAGGGTTTATCAATAACAACCCCATA +
Preference number: 4 (lower is better)
Translates to: VPSRLTAAPTVG*FNAGFINNNPI
Trigger: TATGGGGTTGTTATTGATAAACCCTGCATTAAACAATCCCACAGTCGGTGCTGCGGTGAGCCGTGATGGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR TCA 90 bp ATGAGTTTTCTCTGGGTATTCTGGTTTCTTCTCAATTCCCAAAGATGCACGTTAGGTGGTCCGGAAATTTaGGCGGCTGGGGAACCACCT +
Preference number: 4 (lower is better)
Translates to: MSFLWVFWFLLNSQRCTLGGPEI*AAGEPP
Trigger: AGGTGGTTCCCCAGCCGCTCAAATTTCCGGACCACC...TAACGTGCATCTTTGGGAATTGAGAAGAAACCAGAATACCCAGAGAAAACTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR TCA 90 bp AACAATGCTTGGTTTGAGAAACCCTGTTCTAAGGTTTTTCTAAGTTGCTTGATTGAGGAGCAGCTGGCTTaGGGGCTGGGAACACTCGCG +
Preference number: 4 (lower is better)
Translates to: NNAWFEKPCSKVFLSCLIEEQLA*GLGTLA
Trigger: CGCGAGTGTTCCCAGCCCTCAAGCCAGCTGCTCCTC...AATCAAGCAACTTAGAAAAACCTTAGAACAGGGTTTCTCAAACCAAGCATTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR GCA 90 bp GAAATAGCATACCTCATCTGTTTCAAACTGGGTGTGGCTAACAATGAGGTAGAAGGTTGGCTCCCACTTTaGTCCCTGAGCTGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: EIAYLICFKLGVANNEVEGWLPL*SLSCWD
Trigger: ATCCCAGCAGCTCAGGGAGCAAAGTGGGAGCCAACC...TTCTACCTCATTGTTAGCCACACCCAGTTTGAAACAGATGAGGTATGCTATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CCA 90 bp ATGAGTTTTCTCTGGGTATTCTGGTTTCTTCTCAATTCCCAAAGATGCACGTTACCCGAACGCAGATCGTaGAAGCCGAAGACGCGGCAA +
Preference number: 4 (lower is better)
Translates to: MSFLWVFWFLLNSQRCTLPERRS*KPKTRQ
Trigger: TTGCCGCGTCTTCGGCTTCCACGATCTGCGTTCGGG...TAACGTGCATCTTTGGGAATTGAGAAGAAACCAGAATACCCAGAGAAAACTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CCA 90 bp AACAATGCTTGGTTTGAGAAACCCTGTTCTAAGGTTTTTCTAAGTTGCTTGATTGCGCTGTCGCCTAACTaGTCCCCAACGGCGTCGGAG +
Preference number: 4 (lower is better)
Translates to: NNAWFEKPCSKVFLSCLIALSPN*SPTASE
Trigger: CTCCGACGCCGTTGGGGACCAGTTAGGCGACAGCGC...AATCAAGCAACTTAGAAAAACCTTAGAACAGGGTTTCTCAAACCAAGCATTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CCA 90 bp GATATCCAGAGTAGTCAATTCATAGAGACTGAATGCTGGTTACCAGAGGCTGAGCCGCAGCACCGACTGTaGGATTGTTTAATGCAGGGT +
Preference number: 4 (lower is better)
Translates to: DIQSSQFIETECWLPEAEPQHRL*DCLMQG
Trigger: ACCCTGCATTAAACAATCCCACAGTCGGTGCTGCGG...CTCAGCCTCTGGTAACCAGCATTCAGTCTCTATGAATTGACTACTCTGGATATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR TCA 90 bp ATGAGTTTTCTCTGGGTATTCTGGTTTCTTCTCAATTCCCAAAGATGCACGTTACTGGTTCCGAACTCCTaGGGTCAAGCCATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: MSFLWVFWFLLNSQRCTLLVPNS*GQAICP
Trigger: TGGGCAGATGGCTTGACCTCAGGAGTTCGGAACCAG...TAACGTGCATCTTTGGGAATTGAGAAGAAACCAGAATACCCAGAGAAAACTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR GCA 90 bp TACAATTACCTTGCAAAAGCACACAATTTTGCTATCCTCAGGCAGGCTTATAATGTGATCATGGCTCACTaGAGCCTCGACCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: YNYLAKAHNFAILRQAYNVIMAH*SLDLPG
Trigger: GCCTGGGAGGTCGAGGCTGCAGTGAGCCATGATCAC...ATTATAAGCCTGCCTGAGGATAGCAAAATTGTGTGCTTTTGCAAGGTAATTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR GCA 90 bp GAAATAGCATACCTCATCTGTTTCAAACTGGGTGTGGCTAACAATGAGGTAGAATCACCCAGGCTGGAATaGAGTGGTACCATCACGGCT +
Preference number: 4 (lower is better)
Translates to: EIAYLICFKLGVANNEVESPRLE*SGTITA
Trigger: AGCCGTGATGGTACCACTGCATTCCAGCCTGGGTGA...TTCTACCTCATTGTTAGCCACACCCAGTTTGAAACAGATGAGGTATGCTATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CCA 90 bp AACAATGCTTGGTTTGAGAAACCCTGTTCTAAGGTTTTTCTAAGTTGCTTGATTAAGACGCGGCAACGGTaGTCCCTCCAGATGCCAGGG +
Preference number: 4 (lower is better)
Translates to: NNAWFEKPCSKVFLSCLIKTRQR*SLQMPG
Trigger: CCCTGGCATCTGGAGGGACCACCGTTGCCGCGTCTT...AATCAAGCAACTTAGAAAAACCTTAGAACAGGGTTTCTCAAACCAAGCATTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CCA 90 bp ATGAGTTTTCTCTGGGTATTCTGGTTTCTTCTCAATTCCCAAAGATGCACGTTAACGGCGACGGCCGCCTaGGAACTAATATGGACAGAG +
Preference number: 4 (lower is better)
Translates to: MSFLWVFWFLLNSQRCTLTATAA*ELIWTE
Trigger: CTCTGTCCATATTAGTTCCCAGGCGGCCGTCGCCGT...TAACGTGCATCTTTGGGAATTGAGAAGAAACCAGAATACCCAGAGAAAACTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CCA 90 bp TACAATTACCTTGCAAAAGCACACAATTTTGCTATCCTCAGGCAGGCTTATAATGAGGCAGCAGCAAGCTaGGCTTGTTGGGCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: YNYLAKAHNFAILRQAYNEAAAS*ACWAAC
Trigger: GCAAGCTGCCCAACAAGCCCAGCTTGCTGCTGCCTC...ATTATAAGCCTGCCTGAGGATAGCAAAATTGTGTGCTTTTGCAAGGTAATTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR TCA 90 bp AACAATGCTTGGTTTGAGAAACCCTGTTCTAAGGTTTTTCTAAGTTGCTTGATTTCCCACTTTGCTCCCTaGGCTGCTGGGATAGGCTCC +
Preference number: 4 (lower is better)
Translates to: NNAWFEKPCSKVFLSCLISHFAP*AAGIGS
Trigger: GGAGCCTATCCCAGCAGCTCAGGGAGCAAAGTGGGA...AATCAAGCAACTTAGAAAAACCTTAGAACAGGGTTTCTCAAACCAAGCATTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR TCA 90 bp GAAATAGCATACCTCATCTGTTTCAAACTGGGTGTGGCTAACAATGAGGTAGAAGGGCCACTGTCTGTGTaGATTTTGCATGTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: EIAYLICFKLGVANNEVEGPLSV*ILHVLH
Trigger: GTGGAGGACATGCAAAATTCACACAGACAGTGGCCC...TTCTACCTCATTGTTAGCCACACCCAGTTTGAAACAGATGAGGTATGCTATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR GCA 90 bp TACAATTACCTTGCAAAAGCACACAATTTTGCTATCCTCAGGCAGGCTTATAATAGCTGGGACTACAGGTaGAAGCCACCACCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: YNYLAKAHNFAILRQAYNSWDYR*KPPPLA
Trigger: AGCCAGAGGTGGTGGCTTGCACCTGTAGTCCCAGCT...ATTATAAGCCTGCCTGAGGATAGCAAAATTGTGTGCTTTTGCAAGGTAATTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR GCA 90 bp CCTGGTATGTTTTCCCCAGTAATTGGAGCATCCTTAGATGCCTTAACAACAAGGAGGATTTTGCTCTGTTaGCCAGACTGGAGTGCAGTA +
Preference number: 4 (lower is better)
Translates to: PGMFSPVIGASLDALTTRRILLC*PDWSAV
Trigger: TACTGCACTCCAGTCTGGGCAACAGAGCAAAATCCT...CCTTGTTGTTAAGGCATCTAAGGATGCTCCAATTACTGGGGAAAACATACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CCA 90 bp GAAATAGCATACCTCATCTGTTTCAAACTGGGTGTGGCTAACAATGAGGTAGAAGCCTGGGAACTAATATaGACAGAGCCAGGCACAGTG +
Preference number: 4 (lower is better)
Translates to: EIAYLICFKLGVANNEVEAWELI*TEPGTV
Trigger: CACTGTGCCTGGCTCTGTCCATATTAGTTCCCAGGC...TTCTACCTCATTGTTAGCCACACCCAGTTTGAAACAGATGAGGTATGCTATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CCA 90 bp AACAATGCTTGGTTTGAGAAACCCTGTTCTAAGGTTTTTCTAAGTTGCTTGATTGAGGGGAAAGCGCGGTaGTCCGGAAATTTGAGCGGC +
Preference number: 4 (lower is better)
Translates to: NNAWFEKPCSKVFLSCLIEGKAR*SGNLSG
Trigger: GCCGCTCAAATTTCCGGACCACCGCGCTTTCCCCTC...AATCAAGCAACTTAGAAAAACCTTAGAACAGGGTTTCTCAAACCAAGCATTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CCA 90 bp AACAATGCTTGGTTTGAGAAACCCTGTTCTAAGGTTTTTCTAAGTTGCTTGATTGAACGGAGGAGCAGCTaGCTTGAGGGCTGGGAACAC +
Preference number: 4 (lower is better)
Translates to: NNAWFEKPCSKVFLSCLIERRSS*LEGWEH
Trigger: GTGTTCCCAGCCCTCAAGCCAGCTGCTCCTCCGTTC...AATCAAGCAACTTAGAAAAACCTTAGAACAGGGTTTCTCAAACCAAGCATTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CCA 90 bp CCTGGTATGTTTTCCCCAGTAATTGGAGCATCCTTAGATGCCTTAACAACAAGGACACCCAGGGACAGTTaGCTATGTCTGGAGACATTT +
Preference number: 4 (lower is better)
Translates to: PGMFSPVIGASLDALTTRTPRDS*LCLETF
Trigger: AAATGTCTCCAGACATAGCCAACTGTCCCTGGGTGT...CCTTGTTGTTAAGGCATCTAAGGATGCTCCAATTACTGGGGAAAACATACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CCA 90 bp CCTGGTATGTTTTCCCCAGTAATTGGAGCATCCTTAGATGCCTTAACAACAAGGTCTGTAGACGGATGGTaGTGGTGGTTGCACAATAGT +
Preference number: 4 (lower is better)
Translates to: PGMFSPVIGASLDALTTRSVDGW*WWLHNS
Trigger: ACTATTGTGCAACCACCACCACCATCCGTCTACAGA...CCTTGTTGTTAAGGCATCTAAGGATGCTCCAATTACTGGGGAAAACATACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR CAA 72 bp AATTTTGCCTCCTATACTCGCAACACCCAGGGACAGTaGGCTATGTCTGGAGACATTTTTGGGTTGTCACAA +
Preference number: 4 (lower is better)
Translates to: NFASYTRNTQGQ*AMSGDIFGLSQ
Trigger: TTGTGACAACCCAAAAATGTCTCCAGACATAGCCAACTGTCCCTGGGTGTTGCGAGTATAGGAGGCAAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR TCA 90 bp AACAATGCTTGGTTTGAGAAACCCTGTTCTAAGGTTTTTCTAAGTTGCTTGATTATTAGATGCACTGGCTaGGGCAGCAGCAAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: NNAWFEKPCSKVFLSCLIIRCTG*GSSKLG
Trigger: GCCCAGCTTGCTGCTGCCTCAGCCAGTGCATCTAAT...AATCAAGCAACTTAGAAAAACCTTAGAACAGGGTTTCTCAAACCAAGCATTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR GCA 90 bp GATATCCAGAGTAGTCAATTCATAGAGACTGAATGCTGGTTACCAGAGGCTGAGCTGTTGGGCCAATTCTaGTTGTTGCTGTCTAGCTTT +
Preference number: 4 (lower is better)
Translates to: DIQSSQFIETECWLPEAELLGQF*LLLSSF
Trigger: AAAGCTAGACAGCAACAAGCAGAATTGGCCCAACAG...CTCAGCCTCTGGTAACCAGCATTCAGTCTCTATGAATTGACTACTCTGGATATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR GCA 90 bp ATGAGTTTTCTCTGGGTATTCTGGTTTCTTCTCAATTCCCAAAGATGCACGTTAGTTGTCAGGCTGGAGTaGAGTGTCGCGATCTCAACT +
Preference number: 4 (lower is better)
Translates to: MSFLWVFWFLLNSQRCTLVVRLE*SVAIST
Trigger: AGTTGAGATCGCGACACTGCACTCCAGCCTGACAAC...TAACGTGCATCTTTGGGAATTGAGAAGAAACCAGAATACCCAGAGAAAACTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CCA 90 bp ATGAGTTTTCTCTGGGTATTCTGGTTTCTTCTCAATTCCCAAAGATGCACGTTAGGAAATTTGAGCGGCTaGGGAACCACCTTCGTGTCT +
Preference number: 4 (lower is better)
Translates to: MSFLWVFWFLLNSQRCTLGNLSG*GTTFVS
Trigger: AGACACGAAGGTGGTTCCCCAGCCGCTCAAATTTCC...TAACGTGCATCTTTGGGAATTGAGAAGAAACCAGAATACCCAGAGAAAACTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CCA 90 bp GATATCCAGAGTAGTCAATTCATAGAGACTGAATGCTGGTTACCAGAGGCTGAGCTAGATGATCTAAGGTaGTGGTTTTCAACAGGGTGC +
Preference number: 4 (lower is better)
Translates to: DIQSSQFIETECWLPEAELDDLR*WFSTGC
Trigger: GCACCCTGTTGAAAACCACCACCTTAGATCATCTAG...CTCAGCCTCTGGTAACCAGCATTCAGTCTCTATGAATTGACTACTCTGGATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CCA 90 bp CCTGGTATGTTTTCCCCAGTAATTGGAGCATCCTTAGATGCCTTAACAACAAGGGACGGATGGTGGTGGTaGTTGCACAATAGTATGAAT +
Preference number: 4 (lower is better)
Translates to: PGMFSPVIGASLDALTTRDGWWW*LHNSMN
Trigger: ATTCATACTATTGTGCAACCACCACCACCATCCGTC...CCTTGTTGTTAAGGCATCTAAGGATGCTCCAATTACTGGGGAAAACATACCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CCA 90 bp ATGAGTTTTCTCTGGGTATTCTGGTTTCTTCTCAATTCCCAAAGATGCACGTTACTATGTTGGCCGGGATaGTCTCTATCTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: MSFLWVFWFLLNSQRCTLLCWPG*SLSPDL
Trigger: GAGGTCAGGAGATAGAGACCATCCCGGCCAACATAG...TAACGTGCATCTTTGGGAATTGAGAAGAAACCAGAATACCCAGAGAAAACTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR TCA 90 bp ATGAGTTTTCTCTGGGTATTCTGGTTTCTTCTCAATTCCCAAAGATGCACGTTACCTGCTTTATGCAGGTaGGCCCTAAACTTAGAGGCA +
Preference number: 4 (lower is better)
Translates to: MSFLWVFWFLLNSQRCTLPALCR*ALNLEA
Trigger: TGCCTCTAAGTTTAGGGCTCACCTGCATAAAGCAGG...TAACGTGCATCTTTGGGAATTGAGAAGAAACCAGAATACCCAGAGAAAACTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR GCA 90 bp CCTGGTATGTTTTCCCCAGTAATTGGAGCATCCTTAGATGCCTTAACAACAAGGGGAAGGCAGTGCCTATaGCATCTGAATTGGATAATT +
Preference number: 4 (lower is better)
Translates to: PGMFSPVIGASLDALTTRGRQCL*HLNWII
Trigger: AATTATCCAATTCAGATGGCATAGGCACTGCCTTCC...CCTTGTTGTTAAGGCATCTAAGGATGCTCCAATTACTGGGGAAAACATACCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CCA 90 bp CCTGGTATGTTTTCCCCAGTAATTGGAGCATCCTTAGATGCCTTAACAACAAGGTCATCTGTTTCAAACTaGGTGTGGCTAACAATGAGG +
Preference number: 4 (lower is better)
Translates to: PGMFSPVIGASLDALTTRSSVSN*VWLTMR
Trigger: CCTCATTGTTAGCCACACCCAGTTTGAAACAGATGA...CCTTGTTGTTAAGGCATCTAAGGATGCTCCAATTACTGGGGAAAACATACCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CCA 90 bp AACAATGCTTGGTTTGAGAAACCCTGTTCTAAGGTTTTTCTAAGTTGCTTGATTGCAACCTCCGCCTTCTaGGTTCAAGAAATCCCCTGC +
Preference number: 4 (lower is better)
Translates to: NNAWFEKPCSKVFLSCLIATSAF*VQEIPC
Trigger: GCAGGGGATTTCTTGAACCCAGAAGGCGGAGGTTGC...AATCAAGCAACTTAGAAAAACCTTAGAACAGGGTTTCTCAAACCAAGCATTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR CAA 72 bp TTTCTTCTCAATTCCCAAAGATGCACGTTAGGTGAATaGGTACAGCTAAATGGTCCCAGTATGCGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: FLLNSQRCTLGE*VQLNGPSMRVC
Trigger: ACACACACGCATACTGGGACCATTTAGCTGTACCAATTCACCTAACGTGCATCTTTGGGAATTGAGAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR GCA 90 bp GATATCCAGAGTAGTCAATTCATAGAGACTGAATGCTGGTTACCAGAGGCTGAGTTTTTGTTTTTGAACTaGATGGTGGTAGGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: DIQSSQFIETECWLPEAEFLFLN*MVVGGA
Trigger: AGCACCTCCTACCACCATGCAGTTCAAAAACAAAAA...CTCAGCCTCTGGTAACCAGCATTCAGTCTCTATGAATTGACTACTCTGGATATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR GCA 90 bp ATGAGTTTTCTCTGGGTATTCTGGTTTCTTCTCAATTCCCAAAGATGCACGTTATTTGAGACGAAGTCTTaGTCTGTTGTCAGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: MSFLWVFWFLLNSQRCTLFETKS*SVVRLE
Trigger: CTCCAGCCTGACAACAGAGCAAGACTTCGTCTCAAA...TAACGTGCATCTTTGGGAATTGAGAAGAAACCAGAATACCCAGAGAAAACTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CCA 90 bp ATGAGTTTTCTCTGGGTATTCTGGTTTCTTCTCAATTCCCAAAGATGCACGTTAGAAAAACAGAGGAGGTaGGGTAGGACTTGTGGTCAA +
Preference number: 4 (lower is better)
Translates to: MSFLWVFWFLLNSQRCTLEKQRR*GRTCGQ
Trigger: TTGACCACAAGTCCTACCCCACCTCCTCTGTTTTTC...TAACGTGCATCTTTGGGAATTGAGAAGAAACCAGAATACCCAGAGAAAACTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CCA 90 bp ATGAGTTTTCTCTGGGTATTCTGGTTTCTTCTCAATTCCCAAAGATGCACGTTATCATTCTCTTCACCCTaGCCGATCCTAACCATGACA +
Preference number: 4 (lower is better)
Translates to: MSFLWVFWFLLNSQRCTLSFSSP*PILTMT
Trigger: TGTCATGGTTAGGATCGGCCAGGGTGAAGAGAATGA...TAACGTGCATCTTTGGGAATTGAGAAGAAACCAGAATACCCAGAGAAAACTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CCA 90 bp ATGAGTTTTCTCTGGGTATTCTGGTTTCTTCTCAATTCCCAAAGATGCACGTTAATAGAGACTGAATGCTaGTTACCAGAGGCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: MSFLWVFWFLLNSQRCTLIETEC*LPEAEE
Trigger: CTCCTCAGCCTCTGGTAACCAGCATTCAGTCTCTAT...TAACGTGCATCTTTGGGAATTGAGAAGAAACCAGAATACCCAGAGAAAACTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR TCA 90 bp ATGAGTTTTCTCTGGGTATTCTGGTTTCTTCTCAATTCCCAAAGATGCACGTTATTTCTAGTGCTTGTATaGCATGCTCTGGTGAGATGG +
Preference number: 4 (lower is better)
Translates to: MSFLWVFWFLLNSQRCTLFLVLV*HALVRW
Trigger: CCATCTCACCAGAGCATGTCATACAAGCACTAGAAA...TAACGTGCATCTTTGGGAATTGAGAAGAAACCAGAATACCCAGAGAAAACTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR TCA 90 bp ATGAGTTTTCTCTGGGTATTCTGGTTTCTTCTCAATTCCCAAAGATGCACGTTAAGCTACCCAAGACACTaGACTGAAATAAGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: MSFLWVFWFLLNSQRCTLSYPRH*TEISRL
Trigger: CAACCTGCTTATTTCAGTTCAGTGTCTTGGGTAGCT...TAACGTGCATCTTTGGGAATTGAGAAGAAACCAGAATACCCAGAGAAAACTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR GCA 90 bp ATGAGTTTTCTCTGGGTATTCTGGTTTCTTCTCAATTCCCAAAGATGCACGTTAAGTGCTTGTATGACATaGTCTGGTGAGATGGTCTTC +
Preference number: 4 (lower is better)
Translates to: MSFLWVFWFLLNSQRCTLSACMT*SGEMVF
Trigger: GAAGACCATCTCACCAGAGCATGTCATACAAGCACT...TAACGTGCATCTTTGGGAATTGAGAAGAAACCAGAATACCCAGAGAAAACTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR GCA 90 bp ATGAGTTTTCTCTGGGTATTCTGGTTTCTTCTCAATTCCCAAAGATGCACGTTAGAAATTGGAAGGCAGTaGCTATGCCATCTGAATTGG +
Preference number: 4 (lower is better)
Translates to: MSFLWVFWFLLNSQRCTLEIGRQ*LCHLNW
Trigger: CCAATTCAGATGGCATAGGCACTGCCTTCCAATTTC...TAACGTGCATCTTTGGGAATTGAGAAGAAACCAGAATACCCAGAGAAAACTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CCA 90 bp GAAATAGCATACCTCATCTGTTTCAAACTGGGTGTGGCTAACAATGAGGTAGAACATGCTCTGGTGAGATaGTCTTCTTTTCCGATTTGT +
Preference number: 4 (lower is better)
Translates to: EIAYLICFKLGVANNEVEHALVR*SSFPIC
Trigger: ACAAATCGGAAAAGAAGACCATCTCACCAGAGCATG...TTCTACCTCATTGTTAGCCACACCCAGTTTGAAACAGATGAGGTATGCTATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CCA 90 bp CCTGGTATGTTTTCCCCAGTAATTGGAGCATCCTTAGATGCCTTAACAACAAGGTGCTACACATTAAAATaGTGCCTTCTTACAGTCACT +
Preference number: 4 (lower is better)
Translates to: PGMFSPVIGASLDALTTRCYTLK*CLLTVT
Trigger: AGTGACTGTAAGAAGGCACCATTTTAATGTGTAGCA...CCTTGTTGTTAAGGCATCTAAGGATGCTCCAATTACTGGGGAAAACATACCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CCA 90 bp AACAATGCTTGGTTTGAGAAACCCTGTTCTAAGGTTTTTCTAAGTTGCTTGATTCAACTGGAAGTAGGGTaGGGAGTGGTGCTAATGACA +
Preference number: 4 (lower is better)
Translates to: NNAWFEKPCSKVFLSCLIQLEVG*GVVLMT
Trigger: TGTCATTAGCACCACTCCCCACCCTACTTCCAGTTG...AATCAAGCAACTTAGAAAAACCTTAGAACAGGGTTTCTCAAACCAAGCATTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CCA 90 bp TACAATTACCTTGCAAAAGCACACAATTTTGCTATCCTCAGGCAGGCTTATAATGTAGACGGATGGTGGTaGTGGTTGCACAATAGTATG +
Preference number: 4 (lower is better)
Translates to: YNYLAKAHNFAILRQAYNVDGWW*WLHNSM
Trigger: CATACTATTGTGCAACCACCACCACCATCCGTCTAC...ATTATAAGCCTGCCTGAGGATAGCAAAATTGTGTGCTTTTGCAAGGTAATTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CCA 90 bp CCTGGTATGTTTTCCCCAGTAATTGGAGCATCCTTAGATGCCTTAACAACAAGGATTAAAAACTTATTCTaGCAAGTCTCCCTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: PGMFSPVIGASLDALTTRIKNLF*QVSLFH
Trigger: GTGGAAGAGGGAGACTTGCCAGAATAAGTTTTTAAT...CCTTGTTGTTAAGGCATCTAAGGATGCTCCAATTACTGGGGAAAACATACCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR TCA 90 bp TACAATTACCTTGCAAAAGCACACAATTTTGCTATCCTCAGGCAGGCTTATAATTATGACATGCTCTGGTaGGATGGTCTTCTTTTCCGA +
Preference number: 4 (lower is better)
Translates to: YNYLAKAHNFAILRQAYNYDMLW*DGLLFR
Trigger: TCGGAAAAGAAGACCATCTCACCAGAGCATGTCATA...ATTATAAGCCTGCCTGAGGATAGCAAAATTGTGTGCTTTTGCAAGGTAATTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR TCA 90 bp GAAATAGCATACCTCATCTGTTTCAAACTGGGTGTGGCTAACAATGAGGTAGAAGTACTACATACCAAATaGCCAAAATGTCTTTTGGGC +
Preference number: 4 (lower is better)
Translates to: EIAYLICFKLGVANNEVEVLHTK*PKCLLG
Trigger: GCCCAAAAGACATTTTGGTCATTTGGTATGTAGTAC...TTCTACCTCATTGTTAGCCACACCCAGTTTGAAACAGATGAGGTATGCTATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR TCA 90 bp GAAATAGCATACCTCATCTGTTTCAAACTGGGTGTGGCTAACAATGAGGTAGAACCCAAGACACTGAACTaGAATAAGCAGGTTGAAAAA +
Preference number: 4 (lower is better)
Translates to: EIAYLICFKLGVANNEVEPKTLN*NKQVEK
Trigger: TTTTTCAACCTGCTTATTTCAGTTCAGTGTCTTGGG...TTCTACCTCATTGTTAGCCACACCCAGTTTGAAACAGATGAGGTATGCTATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR TCA 90 bp GAAATAGCATACCTCATCTGTTTCAAACTGGGTGTGGCTAACAATGAGGTAGAATCTGCTTCCTTAGAATaGGTTCTACAATTACCTTGC +
Preference number: 4 (lower is better)
Translates to: EIAYLICFKLGVANNEVESASLE*VLQLPC
Trigger: GCAAGGTAATTGTAGAACTCATTCTAAGGAAGCAGA...TTCTACCTCATTGTTAGCCACACCCAGTTTGAAACAGATGAGGTATGCTATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR GCA 90 bp ATGAGTTTTCTCTGGGTATTCTGGTTTCTTCTCAATTCCCAAAGATGCACGTTAACTCTTCTTCAGGAATaGCAAGGTTTTCCAAACGAG +
Preference number: 4 (lower is better)
Translates to: MSFLWVFWFLLNSQRCTLTLLQE*QGFPNE
Trigger: CTCGTTTGGAAAACCTTGGCATTCCTGAAGAAGAGT...TAACGTGCATCTTTGGGAATTGAGAAGAAACCAGAATACCCAGAGAAAACTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR GCA 90 bp CCTGGTATGTTTTCCCCAGTAATTGGAGCATCCTTAGATGCCTTAACAACAAGGGTAACCAGAAATATATaGCATAGGGACTTAACTCTT +
Preference number: 4 (lower is better)
Translates to: PGMFSPVIGASLDALTTRVTRNI*HRDLTL
Trigger: AAGAGTTAAGTCCCTATGGCATATATTTCTGGTTAC...CCTTGTTGTTAAGGCATCTAAGGATGCTCCAATTACTGGGGAAAACATACCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR GCA 90 bp ATGAGTTTTCTCTGGGTATTCTGGTTTCTTCTCAATTCCCAAAGATGCACGTTATGTCCTCCACATATCTaGATGAGTTTTCTCTGGGTA +
Preference number: 4 (lower is better)
Translates to: MSFLWVFWFLLNSQRCTLCPPHI*MSFLWV
Trigger: TACCCAGAGAAAACTCATGCAGATATGTGGAGGACA...TAACGTGCATCTTTGGGAATTGAGAAGAAACCAGAATACCCAGAGAAAACTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CCA 90 bp AACAATGCTTGGTTTGAGAAACCCTGTTCTAAGGTTTTTCTAAGTTGCTTGATTGAGGTTTCACTATGTTaGCCGGGATGGTCTCTATCT +
Preference number: 4 (lower is better)
Translates to: NNAWFEKPCSKVFLSCLIEVSLC*PGWSLS
Trigger: AGATAGAGACCATCCCGGCCAACATAGTGAAACCTC...AATCAAGCAACTTAGAAAAACCTTAGAACAGGGTTTCTCAAACCAAGCATTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370272.9
3UTR CAA 72 bp AAGATGAAGAGTTCTGTAGACGGATGGTGGTGGTGGTaGCACAATAGTATGAATATACTTAATGCCACAGAA +
Preference number: 4 (lower is better)
Translates to: KMKSSVDGWWWW*HNSMNILNATE
Trigger: TTCTGTGGCATTAAGTATATTCATACTATTGTGCAACCACCACCACCATCCGTCTACAGAACTCTTCATCTT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR TCA 90 bp GAAATAGCATACCTCATCTGTTTCAAACTGGGTGTGGCTAACAATGAGGTAGAAGGTTGCACAATAGTATaGATATACTTAATGCCACAG +
Preference number: 4 (lower is better)
Translates to: EIAYLICFKLGVANNEVEGCTIV*IYLMPQ
Trigger: CTGTGGCATTAAGTATATTCATACTATTGTGCAACC...TTCTACCTCATTGTTAGCCACACCCAGTTTGAAACAGATGAGGTATGCTATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR GCA 90 bp TACAATTACCTTGCAAAAGCACACAATTTTGCTATCCTCAGGCAGGCTTATAATGAGATTTATAATGGCTaGTCTAGGTCCTATCGGGTA +
Preference number: 4 (lower is better)
Translates to: YNYLAKAHNFAILRQAYNEIYNG*SRSYRV
Trigger: TACCCGATAGGACCTAGAGCAGCCATTATAAATCTC...ATTATAAGCCTGCCTGAGGATAGCAAAATTGTGTGCTTTTGCAAGGTAATTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR GCA 90 bp ATGAGTTTTCTCTGGGTATTCTGGTTTCTTCTCAATTCCCAAAGATGCACGTTATGTCTGTGTGAATTTTaGATGTCCTCCACATATCTG +
Preference number: 4 (lower is better)
Translates to: MSFLWVFWFLLNSQRCTLCLCEF*MSSTYL
Trigger: CAGATATGTGGAGGACATGCAAAATTCACACAGACA...TAACGTGCATCTTTGGGAATTGAGAAGAAACCAGAATACCCAGAGAAAACTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR TCA 90 bp TACAATTACCTTGCAAAAGCACACAATTTTGCTATCCTCAGGCAGGCTTATAATACCCTGCTGATACTTTaGTTTAGGCCTAATGAAACT +
Preference number: 4 (lower is better)
Translates to: YNYLAKAHNFAILRQAYNTLLIL*FRPNET
Trigger: AGTTTCATTAGGCCTAAATCAAAGTATCAGCAGGGT...ATTATAAGCCTGCCTGAGGATAGCAAAATTGTGTGCTTTTGCAAGGTAATTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR TCA 90 bp AACAATGCTTGGTTTGAGAAACCCTGTTCTAAGGTTTTTCTAAGTTGCTTGATTCTCCACATATCTGCATaGGTTTTCTCTGGGTATTCT +
Preference number: 4 (lower is better)
Translates to: NNAWFEKPCSKVFLSCLILHISA*VFSGYS
Trigger: AGAATACCCAGAGAAAACTCATGCAGATATGTGGAG...AATCAAGCAACTTAGAAAAACCTTAGAACAGGGTTTCTCAAACCAAGCATTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR TCA 90 bp ATGAGTTTTCTCTGGGTATTCTGGTTTCTTCTCAATTCCCAAAGATGCACGTTATGTGTTACCAGTCTATaGCTGGACTATCAATACTTA +
Preference number: 4 (lower is better)
Translates to: MSFLWVFWFLLNSQRCTLCVTSL*LDYQYL
Trigger: TAAGTATTGATAGTCCAGTCATAGACTGGTAACACA...TAACGTGCATCTTTGGGAATTGAGAAGAAACCAGAATACCCAGAGAAAACTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR TCA 90 bp AACAATGCTTGGTTTGAGAAACCCTGTTCTAAGGTTTTTCTAAGTTGCTTGATTATAATCAGACCATTTTaGGCCTGGTATGTTTTCCCC +
Preference number: 4 (lower is better)
Translates to: NNAWFEKPCSKVFLSCLIIIRPF*AWYVFP
Trigger: GGGGAAAACATACCAGGCTCAAAATGGTCTGATTAT...AATCAAGCAACTTAGAAAAACCTTAGAACAGGGTTTCTCAAACCAAGCATTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR GCA 90 bp TACAATTACCTTGCAAAAGCACACAATTTTGCTATCCTCAGGCAGGCTTATAATGCCAATTCTGCTTGTTaGTGTCTAGCTTTTGCAAAT +
Preference number: 4 (lower is better)
Translates to: YNYLAKAHNFAILRQAYNANSAC*CLAFAN
Trigger: ATTTGCAAAAGCTAGACAGCAACAAGCAGAATTGGC...ATTATAAGCCTGCCTGAGGATAGCAAAATTGTGTGCTTTTGCAAGGTAATTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR GCA 90 bp GAAATAGCATACCTCATCTGTTTCAAACTGGGTGTGGCTAACAATGAGGTAGAATACACATTAAAATGGTaGCTTCTTACAGTCACTTTG +
Preference number: 4 (lower is better)
Translates to: EIAYLICFKLGVANNEVEYTLKW*LLTVTL
Trigger: CAAAGTGACTGTAAGAAGGCACCATTTTAATGTGTA...TTCTACCTCATTGTTAGCCACACCCAGTTTGAAACAGATGAGGTATGCTATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR GCA 90 bp TACAATTACCTTGCAAAAGCACACAATTTTGCTATCCTCAGGCAGGCTTATAATTGGTTTTCAACAGGGTaGAATTTTGCCTCCTATACT +
Preference number: 4 (lower is better)
Translates to: YNYLAKAHNFAILRQAYNWFSTG*NFASYT
Trigger: AGTATAGGAGGCAAAATTGCACCCTGTTGAAAACCA...ATTATAAGCCTGCCTGAGGATAGCAAAATTGTGTGCTTTTGCAAGGTAATTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR GCA 90 bp GAAATAGCATACCTCATCTGTTTCAAACTGGGTGTGGCTAACAATGAGGTAGAATTTCCCTATTTCAATTaGGAATATACAGATCTGTGC +
Preference number: 4 (lower is better)
Translates to: EIAYLICFKLGVANNEVEFPYFN*EYTDLC
Trigger: GCACAGATCTGTATATTCGCAATTGAAATAGGGAAA...TTCTACCTCATTGTTAGCCACACCCAGTTTGAAACAGATGAGGTATGCTATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR GCA 90 bp AACAATGCTTGGTTTGAGAAACCCTGTTCTAAGGTTTTTCTAAGTTGCTTGATTTGGAGCATCCTTAGATaGCTTAACAACAAGGACAGT +
Preference number: 4 (lower is better)
Translates to: NNAWFEKPCSKVFLSCLIWSILR*LNNKDS
Trigger: ACTGTCCTTGTTGTTAAGGCATCTAAGGATGCTCCA...AATCAAGCAACTTAGAAAAACCTTAGAACAGGGTTTCTCAAACCAAGCATTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR GCA 90 bp TACAATTACCTTGCAAAAGCACACAATTTTGCTATCCTCAGGCAGGCTTATAATAAAAGCACACAATTTTaGTATCCTCAGGCAGGCTTA +
Preference number: 4 (lower is better)
Translates to: YNYLAKAHNFAILRQAYNKSTQF*YPQAGL
Trigger: TAAGCCTGCCTGAGGATAGCAAAATTGTGTGCTTTT...ATTATAAGCCTGCCTGAGGATAGCAAAATTGTGTGCTTTTGCAAGGTAATTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CCA 90 bp AACAATGCTTGGTTTGAGAAACCCTGTTCTAAGGTTTTTCTAAGTTGCTTGATTGTCTGGAGACATTTTTaGGTTGTCACAACTGGAAGT +
Preference number: 4 (lower is better)
Translates to: NNAWFEKPCSKVFLSCLIVWRHF*VVTTGS
Trigger: ACTTCCAGTTGTGACAACCCAAAAATGTCTCCAGAC...AATCAAGCAACTTAGAAAAACCTTAGAACAGGGTTTCTCAAACCAAGCATTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CCA 90 bp GAAATAGCATACCTCATCTGTTTCAAACTGGGTGTGGCTAACAATGAGGTAGAAATACTACGGCATATTTaGCCTTTAAGAGGAAAGAAA +
Preference number: 4 (lower is better)
Translates to: EIAYLICFKLGVANNEVEILRHI*PLRGKK
Trigger: TTTCTTTCCTCTTAAAGGCCAAATATGCCGTAGTAT...TTCTACCTCATTGTTAGCCACACCCAGTTTGAAACAGATGAGGTATGCTATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR TCA 90 bp AACAATGCTTGGTTTGAGAAACCCTGTTCTAAGGTTTTTCTAAGTTGCTTGATTCTTCTTTTACTTCACTaGTGTAAGAGCCAAATCCCA +
Preference number: 4 (lower is better)
Translates to: NNAWFEKPCSKVFLSCLILLLLH*CKSQIP
Trigger: TGGGATTTGGCTCTTACATCAGTGAAGTAAAAGAAG...AATCAAGCAACTTAGAAAAACCTTAGAACAGGGTTTCTCAAACCAAGCATTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR TCA 90 bp TACAATTACCTTGCAAAAGCACACAATTTTGCTATCCTCAGGCAGGCTTATAATTTAGTCTTTTTGCAGTaGTACTGTGTGTTGCTTCTA +
Preference number: 4 (lower is better)
Translates to: YNYLAKAHNFAILRQAYNLVFLQ*YCVLLL
Trigger: TAGAAGCAACACACAGTATCACTGCAAAAAGACTAA...ATTATAAGCCTGCCTGAGGATAGCAAAATTGTGTGCTTTTGCAAGGTAATTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR GCA 90 bp ATGAGTTTTCTCTGGGTATTCTGGTTTCTTCTCAATTCCCAAAGATGCACGTTATTATTTTTAATGGTGTaGCTGTGTTACCAGTCTATG +
Preference number: 4 (lower is better)
Translates to: MSFLWVFWFLLNSQRCTLLFLMV*LCYQSM
Trigger: CATAGACTGGTAACACAGGCACACCATTAAAAATAA...TAACGTGCATCTTTGGGAATTGAGAAGAAACCAGAATACCCAGAGAAAACTCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CCA 90 bp ATGAGTTTTCTCTGGGTATTCTGGTTTCTTCTCAATTCCCAAAGATGCACGTTATTTCCAAACGAGAACTaGCCTTTCTTCTTTTTAATG +
Preference number: 4 (lower is better)
Translates to: MSFLWVFWFLLNSQRCTLFPNEN*PFFFLM
Trigger: CATTAAAAAGAAGAAAGGCCAGTTCTCGTTTGGAAA...TAACGTGCATCTTTGGGAATTGAGAAGAAACCAGAATACCCAGAGAAAACTCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CCA 90 bp AACAATGCTTGGTTTGAGAAACCCTGTTCTAAGGTTTTTCTAAGTTGCTTGATTAGGAGTTTGAGGCTATaGTGCATTATGATTATGCCT +
Preference number: 4 (lower is better)
Translates to: NNAWFEKPCSKVFLSCLIRSLRL*CIMIMP
Trigger: AGGCATAATCATAATGCACCATAGCCTCAAACTCCT...AATCAAGCAACTTAGAAAAACCTTAGAACAGGGTTTCTCAAACCAAGCATTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CCA 90 bp ATGAGTTTTCTCTGGGTATTCTGGTTTCTTCTCAATTCCCAAAGATGCACGTTAAATACTAACAATGCTTaGTTTGAGAAACCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: MSFLWVFWFLLNSQRCTLNTNNA*FEKPCS
Trigger: AGAACAGGGTTTCTCAAACCAAGCATTGTTAGTATT...TAACGTGCATCTTTGGGAATTGAGAAGAAACCAGAATACCCAGAGAAAACTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CCA 90 bp AACAATGCTTGGTTTGAGAAACCCTGTTCTAAGGTTTTTCTAAGTTGCTTGATTGCAAGCCACCACCTCTaGCTAATTTTTGAATTTTTC +
Preference number: 4 (lower is better)
Translates to: NNAWFEKPCSKVFLSCLIASHHL*LIFEFF
Trigger: GAAAAATTCAAAAATTAGCCAGAGGTGGTGGCTTGC...AATCAAGCAACTTAGAAAAACCTTAGAACAGGGTTTCTCAAACCAAGCATTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR TCA 90 bp AACAATGCTTGGTTTGAGAAACCCTGTTCTAAGGTTTTTCTAAGTTGCTTGATTAAAGTAAAACCTAGATaGTCTAAGGTGGTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: NNAWFEKPCSKVFLSCLIKVKPR*SKVVVF
Trigger: GAAAACCACCACCTTAGATCATCTAGGTTTTACTTT...AATCAAGCAACTTAGAAAAACCTTAGAACAGGGTTTCTCAAACCAAGCATTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CCA 90 bp TACAATTACCTTGCAAAAGCACACAATTTTGCTATCCTCAGGCAGGCTTATAATAGAGGAGGTAATGGGTaGTTATTGTTTAATGAATAC +
Preference number: 4 (lower is better)
Translates to: YNYLAKAHNFAILRQAYNRGGNG*LLFNEY
Trigger: GTATTCATTAAACAATAACCACCCATTACCTCCTCT...ATTATAAGCCTGCCTGAGGATAGCAAAATTGTGTGCTTTTGCAAGGTAATTGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CCA 90 bp AACAATGCTTGGTTTGAGAAACCCTGTTCTAAGGTTTTTCTAAGTTGCTTGATTTTACCAGTCTATGACTaGACTATCAATACTTACCCT +
Preference number: 4 (lower is better)
Translates to: NNAWFEKPCSKVFLSCLILPVYD*TINTYP
Trigger: AGGGTAAGTATTGATAGTCCAGTCATAGACTGGTAA...AATCAAGCAACTTAGAAAAACCTTAGAACAGGGTTTCTCAAACCAAGCATTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR GCA 90 bp AACAATGCTTGGTTTGAGAAACCCTGTTCTAAGGTTTTTCTAAGTTGCTTGATTGTTCTACAATTACCTTaGAAAAGCACACAATTTTGC +
Preference number: 4 (lower is better)
Translates to: NNAWFEKPCSKVFLSCLIVLQLP*KSTQFC
Trigger: GCAAAATTGTGTGCTTTTGCAAGGTAATTGTAGAAC...AATCAAGCAACTTAGAAAAACCTTAGAACAGGGTTTCTCAAACCAAGCATTGTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS GCA 90 bp AGAGCCCGAGGCCCCGCTGCCGCTGCCGCCGCCGCCAGCAGCCGTTaGCGCCGCCTCGGCCAAACCATCCTTCAGACACCCGCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: RARGPAAAAAAASSR*RRLGQTILQTPAPP
Trigger: CGGCGGCGCGGGTGTCTGAAGGATGGTTTGGCCGAGGCGGCGGCAACGGCTGCTGGCGGCGGCGGCAGCGGCAGCGGGGCCTCGGGCTCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS GCA 90 bp CATCCTTCAGACACCCGCGCCGCCGCCTCACAACATGTCCGCCGCTaGCGCTGCCGCTGCCGCTGCTGGAACGGCGACGGCCGCCTGGGA +
Preference number: 5 (lower is better)
Translates to: HPSDTRAAASQHVRR*RCRCRCWNGDGRLG
Trigger: TCCCAGGCGGCCGTCGCCGTTCCAGCAGCGGCAGCGGCAGCGGCAGCGGCGGACATGTTGTGAGGCGGCGGCGCGGGTGTCTGAAGGATG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370267.1
ENST00000370272.9
CDS CCA 90 bp ACTGGTCCCCAACGGCGTCGGAGCAGAGGCAAGATCCAGGGGCACTaGCCTCGCCGCGGTACCGGGCGGGTACCCAGCGGGCTCGGCTCT +
Preference number: 5 (lower is better)
Translates to: TGPQRRRSRGKIQGH*PRRGTGRVPSGLGS
Trigger: AGAGCCGAGCCCGCTGGGTACCCGCCCGGTACCGCGGCGAGGCCAGTGCCCCTGGATCTTGCCTCTGCTCCGACGCCGTTGGGGACCAGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS GCA 90 bp ACCCGCGCCGCCGCCTCACAACATGTCCGCCGCTGCCGCTGCCGCTaGCGCTGCTGGAACGGCGACGGCCGCCTGGGAACTAATATGGAC +
Preference number: 5 (lower is better)
Translates to: TRAAASQHVRRCRCR*RCWNGDGRLGTNMD
Trigger: GTCCATATTAGTTCCCAGGCGGCCGTCGCCGTTCCAGCAGCGGCAGCGGCAGCGGCAGCGGCGGACATGTTGTGAGGCGGCGGCGCGGGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370267.1
ENST00000370272.9
CDS GCA 90 bp TCAGACACCCGCGCCGCCGCCTCACAACATGTCCGCCGCTGCCGCTaGCGCTGCCGCTGCTGGAACGGCGACGGCCGCCTGGGAACTAAT +
Preference number: 5 (lower is better)
Translates to: SDTRAAASQHVRRCR*RCRCWNGDGRLGTN
Trigger: ATTAGTTCCCAGGCGGCCGTCGCCGTTCCAGCAGCGGCAGCGGCAGCGGCAGCGGCGGACATGTTGTGAGGCGGCGGCGCGGGTGTCTGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370267.1
ENST00000370272.9
CDS CCA 90 bp TATGGACAGAGCCAGGCACAGTGGGAGTCGCAGTGGCTGCCGCCGTaGCCGCGTAGCCCGAACGCAGATCGTGGAAGCCGAAGACGCGGC +
Preference number: 5 (lower is better)
Translates to: YGQSQAQWESQWLPP*PRSPNADRGSRRRG
Trigger: GCCGCGTCTTCGGCTTCCACGATCTGCGTTCGGGCTACGCGGCCACGGCGGCAGCCACTGCGACTCCCACTGTGCCTGGCTCTGTCCATA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370267.1
ENST00000370272.9
CDS CCA 90 bp CAGGCTGAGGAGGGGAAAGCGCGGTGGTCCGGAAATTTGAGCGGCTaGGGAACCACCTTCGTGTCTCCTCAGAGGGGCGGGCGCTGTCGC +
Preference number: 5 (lower is better)
Translates to: QAEEGKARWSGNLSG*GTTFVSPQRGGRCR
Trigger: GCGACAGCGCCCGCCCCTCTGAGGAGACACGAAGGTGGTTCCCCAGCCGCTCAAATTTCCGGACCACCGCGCTTTCCCCTCCTCAGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370267.1
ENST00000370272.9
CDS GCA 90 bp GGAACTAATATGGACAGAGCCAGGCACAGTGGGAGTCGCAGTGGCTaGCGCCGTGGCCGCGTAGCCCGAACGCAGATCGTGGAAGCCGAA +
Preference number: 5 (lower is better)
Translates to: GTNMDRARHSGSRSG*RRGRVARTQIVEAE
Trigger: TTCGGCTTCCACGATCTGCGTTCGGGCTACGCGGCCACGGCGGCAGCCACTGCGACTCCCACTGTGCCTGGCTCTGTCCATATTAGTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370267.1
ENST00000370272.9
CDS CCA 90 bp GATTCTAGAGAGAGCACAGCCCAGGCTGAGGAGGGGAAAGCGCGGTaGTCCGGAAATTTGAGCGGCTGGGGAACCACCTTCGTGTCTCCT +
Preference number: 5 (lower is better)
Translates to: DSRESTAQAEEGKAR*SGNLSGWGTTFVSP
Trigger: AGGAGACACGAAGGTGGTTCCCCAGCCGCTCAAATTTCCGGACCACCGCGCTTTCCCCTCCTCAGCCTGGGCTGTGCTCTCTCTAGAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370267.1
ENST00000370272.9
CDS TCA 90 bp GCTGAGGCAGCAGCAAGCTGGGCTTGTTGGGCAGCTTGCTGCATTTaGAGCCATTCCTGTTGGGCCAATTCTGCTTGTTGCTGTCTAGCC +
Preference number: 5 (lower is better)
Translates to: AEAAASWACWAACCI*SHSCWANSACCCLA
Trigger: GGCTAGACAGCAACAAGCAGAATTGGCCCAACAGGAATGGCTTCAAATGCAGCAAGCTGCCCAACAAGCCCAGCTTGCTGCTGCCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481583.1
CDS TCA 90 bp GCTGAGGCAGCAGCAAGCTGGGCTTGTTGGGCAGCTTGCTGCATTTaGAGCCATTCCTGTTGGGCCAATTCTGCTTGTTGCTGTCTAGCT +
Preference number: 5 (lower is better)
Translates to: AEAAASWACWAACCI*SHSCWANSACCCLA
Trigger: AGCTAGACAGCAACAAGCAGAATTGGCCCAACAGGAATGGCTTCAAATGCAGCAAGCTGCCCAACAAGCCCAGCTTGCTGCTGCCTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370267.1
ENST00000370272.9
CDS CCA 90 bp AACACTCGCGTGTGTGAGAGATTTAGGATGAGTTTGGGAAGAAAGTaGGGGCCCGAGGATTCTAGAGAGAGCACAGCCCAGGCTGAGGAG +
Preference number: 5 (lower is better)
Translates to: NTRVCERFRMSLGRK*GPEDSRESTAQAEE
Trigger: CTCCTCAGCCTGGGCTGTGCTCTCTCTAGAATCCTCGGGCCCCCACTTTCTTCCCAAACTCATCCTAAATCTCTCACACACGCGAGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370267.1
ENST00000370272.9
CDS-3UTR CAA 90 bp CCTGGTATGTTTTCCCCAGTAATTGGAGCATCCTTAGATGCCTTAACAACAAGGCGGTGGTCCGGAAATTaGAGCGGCTGGGGAACCACC +
Preference number: 5 (lower is better)
Translates to: PGMFSPVIGASLDALTTRRWSGN*SGWGTT
Trigger: GGTGGTTCCCCAGCCGCTCAAATTTCCGGACCACCG...CCTTGTTGTTAAGGCATCTAAGGATGCTCCAATTACTGGGGAAAACATACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CAA 90 bp GAAATAGCATACCTCATCTGTTTCAAACTGGGTGTGGCTAACAATGAGGTAGAAGGGTTGGCTCCCACTTaGCTCCCTGAGCTGCTGGGA +
Preference number: 5 (lower is better)
Translates to: EIAYLICFKLGVANNEVEGLAPT*LPELLG
Trigger: TCCCAGCAGCTCAGGGAGCAAAGTGGGAGCCAACCC...TTCTACCTCATTGTTAGCCACACCCAGTTTGAAACAGATGAGGTATGCTATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CAA 90 bp CCTGGTATGTTTTCCCCAGTAATTGGAGCATCCTTAGATGCCTTAACAACAAGGGGTATCCGCCAGGGATaGGTTCCAGGATACCCCAAG +
Preference number: 5 (lower is better)
Translates to: PGMFSPVIGASLDALTTRGIRQG*VPGYPK
Trigger: CTTGGGGTATCCTGGAACCAATCCCTGGCGGATACC...CCTTGTTGTTAAGGCATCTAAGGATGCTCCAATTACTGGGGAAAACATACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CAA 90 bp TACAATTACCTTGCAAAAGCACACAATTTTGCTATCCTCAGGCAGGCTTATAATGATGCCAGGGAAGGTTaGCAGGAAGCCGCTCCCGAC +
Preference number: 5 (lower is better)
Translates to: YNYLAKAHNFAILRQAYNDAREG*QEAAPD
Trigger: GTCGGGAGCGGCTTCCTGCAAACCTTCCCTGGCATC...ATTATAAGCCTGCCTGAGGATAGCAAAATTGTGTGCTTTTGCAAGGTAATTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CAA 90 bp GAAATAGCATACCTCATCTGTTTCAAACTGGGTGTGGCTAACAATGAGGTAGAAAGCTCTCGAGCATCGTaGGCCACCCGGACATTAGGA +
Preference number: 5 (lower is better)
Translates to: EIAYLICFKLGVANNEVESSRAS*ATRTLG
Trigger: TCCTAATGTCCGGGTGGCCAACGATGCTCGAGAGCT...TTCTACCTCATTGTTAGCCACACCCAGTTTGAAACAGATGAGGTATGCTATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CAA 90 bp GAAATAGCATACCTCATCTGTTTCAAACTGGGTGTGGCTAACAATGAGGTAGAAAGCAAGCTGGGCTTGTaGGGCAGCTTGCTGCATTTG +
Preference number: 5 (lower is better)
Translates to: EIAYLICFKLGVANNEVESKLGL*GSLLHL
Trigger: CAAATGCAGCAAGCTGCCCAACAAGCCCAGCTTGCT...TTCTACCTCATTGTTAGCCACACCCAGTTTGAAACAGATGAGGTATGCTATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CAA 90 bp CCTGGTATGTTTTCCCCAGTAATTGGAGCATCCTTAGATGCCTTAACAACAAGGTATTACAGTCATCCCTaGGTATCCGCCAGGGATTGG +
Preference number: 5 (lower is better)
Translates to: PGMFSPVIGASLDALTTRYYSHP*VSARDW
Trigger: CCAATCCCTGGCGGATACCAAGGGATGACTGTAATA...CCTTGTTGTTAAGGCATCTAAGGATGCTCCAATTACTGGGGAAAACATACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CAA 90 bp GATATCCAGAGTAGTCAATTCATAGAGACTGAATGCTGGTTACCAGAGGCTGAGTTGGGCCAATTCTGCTaGTTGCTGTCTAGCTTTTGC +
Preference number: 5 (lower is better)
Translates to: DIQSSQFIETECWLPEAELGQFC*LLSSFC
Trigger: GCAAAAGCTAGACAGCAACAAGCAGAATTGGCCCAA...CTCAGCCTCTGGTAACCAGCATTCAGTCTCTATGAATTGACTACTCTGGATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CAA 90 bp GATATCCAGAGTAGTCAATTCATAGAGACTGAATGCTGGTTACCAGAGGCTGAGTTGAAGCCATTCCTGTaGGGCCAATTCTGCTTGTTG +
Preference number: 5 (lower is better)
Translates to: DIQSSQFIETECWLPEAELKPFL*GQFCLL
Trigger: CAACAAGCAGAATTGGCCCAACAGGAATGGCTTCAA...CTCAGCCTCTGGTAACCAGCATTCAGTCTCTATGAATTGACTACTCTGGATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CAA 90 bp CCTGGTATGTTTTCCCCAGTAATTGGAGCATCCTTAGATGCCTTAACAACAAGGTCTCACTTTGGCAGGTaGAATAACGGCCTCCAAAGA +
Preference number: 5 (lower is better)
Translates to: PGMFSPVIGASLDALTTRSHFGR*NNGLQR
Trigger: TCTTTGGAGGCCGTTATTCAACCTGCCAAAGTGAGA...CCTTGTTGTTAAGGCATCTAAGGATGCTCCAATTACTGGGGAAAACATACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CAA 90 bp GATATCCAGAGTAGTCAATTCATAGAGACTGAATGCTGGTTACCAGAGGCTGAGGGACTTGTGGTCAAATaGTTGGGGACAGAGGCAAAA +
Preference number: 5 (lower is better)
Translates to: DIQSSQFIETECWLPEAEGLVVK*LGTEAK
Trigger: TTTTGCCTCTGTCCCCAACAATTTGACCACAAGTCC...CTCAGCCTCTGGTAACCAGCATTCAGTCTCTATGAATTGACTACTCTGGATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CAA 90 bp GATATCCAGAGTAGTCAATTCATAGAGACTGAATGCTGGTTACCAGAGGCTGAGTTTCCTCCTTTTGGATaGCTTGAGCCCAGGAGTTTG +
Preference number: 5 (lower is better)
Translates to: DIQSSQFIETECWLPEAEFPPFG*LEPRSL
Trigger: CAAACTCCTGGGCTCAAGCAATCCAAAAGGAGGAAA...CTCAGCCTCTGGTAACCAGCATTCAGTCTCTATGAATTGACTACTCTGGATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CAA 90 bp GATATCCAGAGTAGTCAATTCATAGAGACTGAATGCTGGTTACCAGAGGCTGAGGCACCGACTGTGGGATaGTTTAATGCAGGGTTTATC +
Preference number: 5 (lower is better)
Translates to: DIQSSQFIETECWLPEAEAPTVG*FNAGFI
Trigger: GATAAACCCTGCATTAAACAATCCCACAGTCGGTGC...CTCAGCCTCTGGTAACCAGCATTCAGTCTCTATGAATTGACTACTCTGGATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CAA 90 bp GAAATAGCATACCTCATCTGTTTCAAACTGGGTGTGGCTAACAATGAGGTAGAAGTGAGATCATCATCGTaGCCAGACGAGGAAGCCATA +
Preference number: 5 (lower is better)
Translates to: EIAYLICFKLGVANNEVEVRSSS*PDEEAI
Trigger: TATGGCTTCCTCGTCTGGCAACGATGATGATCTCAC...TTCTACCTCATTGTTAGCCACACCCAGTTTGAAACAGATGAGGTATGCTATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CAA 90 bp TACAATTACCTTGCAAAAGCACACAATTTTGCTATCCTCAGGCAGGCTTATAATGGCAGCTTGCTGCATTaGAAGCCATTCCTGTTGGGC +
Preference number: 5 (lower is better)
Translates to: YNYLAKAHNFAILRQAYNGSLLH*KPFLLG
Trigger: GCCCAACAGGAATGGCTTCAAATGCAGCAAGCTGCC...ATTATAAGCCTGCCTGAGGATAGCAAAATTGTGTGCTTTTGCAAGGTAATTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CAA 90 bp GATATCCAGAGTAGTCAATTCATAGAGACTGAATGCTGGTTACCAGAGGCTGAGCAAAAGCACACAATTTaGCTATCCTCAGGCAGGCTT +
Preference number: 5 (lower is better)
Translates to: DIQSSQFIETECWLPEAEQKHTI*LSSGRL
Trigger: AAGCCTGCCTGAGGATAGCAAAATTGTGTGCTTTTG...CTCAGCCTCTGGTAACCAGCATTCAGTCTCTATGAATTGACTACTCTGGATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CAA 90 bp TACAATTACCTTGCAAAAGCACACAATTTTGCTATCCTCAGGCAGGCTTATAATGGCTTGTTGGGCAGCTaGCTGCATTTGAAGCCATTC +
Preference number: 5 (lower is better)
Translates to: YNYLAKAHNFAILRQAYNGLLGS*LHLKPF
Trigger: GAATGGCTTCAAATGCAGCAAGCTGCCCAACAAGCC...ATTATAAGCCTGCCTGAGGATAGCAAAATTGTGTGCTTTTGCAAGGTAATTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CAA 90 bp ATGAGTTTTCTCTGGGTATTCTGGTTTCTTCTCAATTCCCAAAGATGCACGTTACTTGAGCCCAGGAGTTaGAGGCTATGGTGCATTATG +
Preference number: 5 (lower is better)
Translates to: MSFLWVFWFLLNSQRCTLLEPRS*RLWCIM
Trigger: CATAATGCACCATAGCCTCAAACTCCTGGGCTCAAG...TAACGTGCATCTTTGGGAATTGAGAAGAAACCAGAATACCCAGAGAAAACTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CAA 90 bp CCTGGTATGTTTTCCCCAGTAATTGGAGCATCCTTAGATGCCTTAACAACAAGGGTCTTCTTTTCCGATTaGTTACAAATCTCATTGGCT +
Preference number: 5 (lower is better)
Translates to: PGMFSPVIGASLDALTTRVFFSD*LQISLA
Trigger: AGCCAATGAGATTTGTAACAAATCGGAAAAGAAGAC...CCTTGTTGTTAAGGCATCTAAGGATGCTCCAATTACTGGGGAAAACATACCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CAA 90 bp TACAATTACCTTGCAAAAGCACACAATTTTGCTATCCTCAGGCAGGCTTATAATTGCACGTTAGGTGAATaGGTACAGCTAAATGGTCCC +
Preference number: 5 (lower is better)
Translates to: YNYLAKAHNFAILRQAYNCTLGE*VQLNGP
Trigger: GGGACCATTTAGCTGTACCAATTCACCTAACGTGCA...ATTATAAGCCTGCCTGAGGATAGCAAAATTGTGTGCTTTTGCAAGGTAATTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CAA 90 bp TACAATTACCTTGCAAAAGCACACAATTTTGCTATCCTCAGGCAGGCTTATAATAAAAGTTTCCTCCTTTaGGATTGCTTGAGCCCAGGA +
Preference number: 5 (lower is better)
Translates to: YNYLAKAHNFAILRQAYNKSFLL*DCLSPG
Trigger: TCCTGGGCTCAAGCAATCCAAAAGGAGGAAACTTTT...ATTATAAGCCTGCCTGAGGATAGCAAAATTGTGTGCTTTTGCAAGGTAATTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CAA 90 bp GAAATAGCATACCTCATCTGTTTCAAACTGGGTGTGGCTAACAATGAGGTAGAAGACTCAAACAGTTATTaGTATACCCACGTTCACAGA +
Preference number: 5 (lower is better)
Translates to: EIAYLICFKLGVANNEVEDSNSY*YTHVHR
Trigger: TCTGTGAACGTGGGTATACAAATAACTGTTTGAGTC...TTCTACCTCATTGTTAGCCACACCCAGTTTGAAACAGATGAGGTATGCTATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CAA 90 bp AACAATGCTTGGTTTGAGAAACCCTGTTCTAAGGTTTTTCTAAGTTGCTTGATTGGCCAATTCTGCTTGTaGCTGTCTAGCTTTTGCAAA +
Preference number: 5 (lower is better)
Translates to: NNAWFEKPCSKVFLSCLIGQFCL*LSSFCK
Trigger: TTTGCAAAAGCTAGACAGCAACAAGCAGAATTGGCC...AATCAAGCAACTTAGAAAAACCTTAGAACAGGGTTTCTCAAACCAAGCATTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CAA 90 bp GAAATAGCATACCTCATCTGTTTCAAACTGGGTGTGGCTAACAATGAGGTAGAACTTCTTACAGTCACTTaGGAAAACTGTTTGACAGTA +
Preference number: 5 (lower is better)
Translates to: EIAYLICFKLGVANNEVELLTVT*ENCLTV
Trigger: TACTGTCAAACAGTTTTCCAAAGTGACTGTAAGAAG...TTCTACCTCATTGTTAGCCACACCCAGTTTGAAACAGATGAGGTATGCTATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CAA 90 bp TACAATTACCTTGCAAAAGCACACAATTTTGCTATCCTCAGGCAGGCTTATAATGGATGGTGGTGGTGGTaGCACAATAGTATGAATATA +
Preference number: 5 (lower is better)
Translates to: YNYLAKAHNFAILRQAYNGWWWW*HNSMNI
Trigger: TATATTCATACTATTGTGCAACCACCACCACCATCC...ATTATAAGCCTGCCTGAGGATAGCAAAATTGTGTGCTTTTGCAAGGTAATTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CAA 90 bp GAAATAGCATACCTCATCTGTTTCAAACTGGGTGTGGCTAACAATGAGGTAGAAAGCCTGGCTAATTTTTaGTATTTTAGCACAGATGAG +
Preference number: 5 (lower is better)
Translates to: EIAYLICFKLGVANNEVESLANF*YFSTDE
Trigger: CTCATCTGTGCTAAAATACAAAAAATTAGCCAGGCT...TTCTACCTCATTGTTAGCCACACCCAGTTTGAAACAGATGAGGTATGCTATTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CAA 90 bp ATGAGTTTTCTCTGGGTATTCTGGTTTCTTCTCAATTCCCAAAGATGCACGTTATATTTGTGTACTGTTTaGTGTGTGTGTGGTATATGC +
Preference number: 5 (lower is better)
Translates to: MSFLWVFWFLLNSQRCTLYLCTV*CVCGIC
Trigger: GCATATACCACACACACACAAAACAGTACACAAATA...TAACGTGCATCTTTGGGAATTGAGAAGAAACCAGAATACCCAGAGAAAACTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CAA 90 bp AACAATGCTTGGTTTGAGAAACCCTGTTCTAAGGTTTTTCTAAGTTGCTTGATTCATAATCAGACCATTTaGAGCCTGGTATGTTTTCCC +
Preference number: 5 (lower is better)
Translates to: NNAWFEKPCSKVFLSCLIHNQTI*SLVCFP
Trigger: GGGAAAACATACCAGGCTCAAAATGGTCTGATTATG...AATCAAGCAACTTAGAAAAACCTTAGAACAGGGTTTCTCAAACCAAGCATTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS GCA 90 bp TTGCAAATAATTCTTGTTGCTGTCTCAATAACTCTTCTTCAGGAATaGCAAGGTTTTCCAAACGAGAACTGGCCTTTCTTCTTTTTAATG +
Preference number: 5 (lower is better)
Translates to: LQIILVAVSITLLQE*QGFPNENWPFFFLM
Trigger: CATTAAAAAGAAGAAAGGCCAGTTCTCGTTTGGAAAACCTTGGCATTCCTGAAGAAGAGTTATTGAGACAGCAACAAGAATTATTTGCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370267.1
ENST00000370272.9
CDS-3UTR CAA 90 bp AACAATGCTTGGTTTGAGAAACCCTGTTCTAAGGTTTTTCTAAGTTGCTTGATTTCTTTGATCATTTTATaGATAGCAGCTCTGGGGATA +
Preference number: 5 (lower is better)
Translates to: NNAWFEKPCSKVFLSCLISLIIL*IAALGI
Trigger: TATCCCCAGAGCTGCTATCAATAAAATGATCAAAGA...AATCAAGCAACTTAGAAAAACCTTAGAACAGGGTTTCTCAAACCAAGCATTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CAA 90 bp AACAATGCTTGGTTTGAGAAACCCTGTTCTAAGGTTTTTCTAAGTTGCTTGATTCTTTCCCTATTTCAATaGCGAATATACAGATCTGTG +
Preference number: 5 (lower is better)
Translates to: NNAWFEKPCSKVFLSCLILSLFQ*RIYRSV
Trigger: CACAGATCTGTATATTCGCAATTGAAATAGGGAAAG...AATCAAGCAACTTAGAAAAACCTTAGAACAGGGTTTCTCAAACCAAGCATTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS-3UTR CAA 90 bp AACAATGCTTGGTTTGAGAAACCCTGTTCTAAGGTTTTTCTAAGTTGCTTGATTCAACCCCATAAACATTaGGGGCTGGATAATATATAT +
Preference number: 5 (lower is better)
Translates to: NNAWFEKPCSKVFLSCLIQPHKH*GLDNIY
Trigger: ATATATATTATCCAGCCCCAAATGTTTATGGGGTTG...AATCAAGCAACTTAGAAAAACCTTAGAACAGGGTTTCTCAAACCAAGCATTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS GCA 72 bp CGCGCCGCCGCCTCACAACATGTCCGCCGCTGCCGCTaGCGCTGCCGCTGCTGGAACGGCGACGGCCGCCTG +
Preference number: 6 (lower is better)
Translates to: RAAASQHVRRCR*RCRCWNGDGRL
Trigger: CAGGCGGCCGTCGCCGTTCCAGCAGCGGCAGCGGCAGCGGCAGCGGCGGACATGTTGTGAGGCGGCGGCGCG
78% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370267.1
ENST00000370272.9
CDS GCA 72 bp GGCCCCGCTGCCGCTGCCGCCGCCGCCAGCAGCCGTTaGCGCCGCCTCGGCCAAACCATCCTTCAGACACCC +
Preference number: 6 (lower is better)
Translates to: GPAAAAAAASSR*RRLGQTILQTP
Trigger: GGGTGTCTGAAGGATGGTTTGGCCGAGGCGGCGGCAACGGCTGCTGGCGGCGGCGGCAGCGGCAGCGGGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS GCA 72 bp GCCGCCTCACAACATGTCCGCCGCTGCCGCTGCCGCTaGCGCTGCTGGAACGGCGACGGCCGCCTGGGAACT +
Preference number: 6 (lower is better)
Translates to: AASQHVRRCRCR*RCWNGDGRLGT
Trigger: AGTTCCCAGGCGGCCGTCGCCGTTCCAGCAGCGGCAGCGGCAGCGGCAGCGGCGGACATGTTGTGAGGCGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370267.1
ENST00000370272.9
CDS GCA 72 bp AGAGGGGCGGGCGCTGTCGCCGCCGCCAGCAGCCGTTaGCGCCGCCTCGGCCAAACCATCCTTCAGACACCC +
Preference number: 6 (lower is better)
Translates to: RGAGAVAAASSR*RRLGQTILQTP
Trigger: GGGTGTCTGAAGGATGGTTTGGCCGAGGCGGCGGCAACGGCTGCTGGCGGCGGCGACAGCGCCCGCCCCTCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370267.1
CDS CCA 72 bp AGCCAGGCACAGTGGGAGTCGCAGTGGCTGCCGCCGTaGCCGCGTAGCCCGAACGCAGATCGTGGAAGCCGA +
Preference number: 6 (lower is better)
Translates to: SQAQWESQWLPP*PRSPNADRGSR
Trigger: TCGGCTTCCACGATCTGCGTTCGGGCTACGCGGCCACGGCGGCAGCCACTGCGACTCCCACTGTGCCTGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370267.1
ENST00000370272.9
CDS GCA 72 bp ATGGACAGAGCCAGGCACAGTGGGAGTCGCAGTGGCTaGCGCCGTGGCCGCGTAGCCCGAACGCAGATCGTG +
Preference number: 6 (lower is better)
Translates to: MDRARHSGSRSG*RRGRVARTQIV
Trigger: CACGATCTGCGTTCGGGCTACGCGGCCACGGCGGCAGCCACTGCGACTCCCACTGTGCCTGGCTCTGTCCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370267.1
ENST00000370272.9
CDS CCA 72 bp CGTGTCTCCTCAGAGGGGCGGGCGCTGTCGCCTAACTaGTCCCCAACGGCGTCGGAGCAGAGGCAAGATCCA +
Preference number: 6 (lower is better)
Translates to: RVSSEGRALSPN*SPTASEQRQDP
Trigger: TGGATCTTGCCTCTGCTCCGACGCCGTTGGGGACCAGTTAGGCGACAGCGCCCGCCCCTCTGAGGAGACACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370272.9
CDS CCA 72 bp GAGGGGAAAGCGCGGTGGTCCGGAAATTTGAGCGGCTaGGGAACCACCTTCGTGTCTCCTCAGAGGGGCGGG +
Preference number: 6 (lower is better)
Translates to: EGKARWSGNLSG*GTTFVSPQRGG
Trigger: CCCGCCCCTCTGAGGAGACACGAAGGTGGTTCCCCAGCCGCTCAAATTTCCGGACCACCGCGCTTTCCCCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370267.1
ENST00000370272.9
CDS CAA 72 bp CAGGCTGAGGAGGGGAAAGCGCGGTGGTCCGGAAATTaGAGCGGCTGGGGAACCACCTTCGTGTCTCCTCAG +
Preference number: 6 (lower is better)
Translates to: QAEEGKARWSGN*SGWGTTFVSPQ
Trigger: CTGAGGAGACACGAAGGTGGTTCCCCAGCCGCTCAAATTTCCGGACCACCGCGCTTTCCCCTCCTCAGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370267.1
ENST00000370272.9
CDS TCA 72 bp AGGCTGAGGAGGGGAAAGCGCGGTGGTCCGGAAATTTaGGCGGCTGGGGAACCACCTTCGTGTCTCCTCAGA +
Preference number: 6 (lower is better)
Translates to: RLRRGKRGGPEI*AAGEPPSCLLR
Trigger: TCTGAGGAGACACGAAGGTGGTTCCCCAGCCGCTCAAATTTCCGGACCACCGCGCTTTCCCCTCCTCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370267.1
ENST00000370272.9
CDS CAA 90 bp TTGAGGGCTGGGAACACTCGCGTGTGTGAGAGATTTAGGATGAGTTaGGGAAGAAAGTGGGGGCCCGAGGATTCTAGAGAGAGCACAGCC +
Preference number: 6 (lower is better)
Translates to: LRAGNTRVCERFRMS*GRKWGPEDSRESTA
Trigger: GGCTGTGCTCTCTCTAGAATCCTCGGGCCCCCACTTTCTTCCCAAACTCATCCTAAATCTCTCACACACGCGAGTGTTCCCAGCCCTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370267.1
ENST00000370272.9
CDS CAA 72 bp TCAGTGCAGCAGTTCACCACCAGCTCTCGAGCATCGTaGGCCACCCGGACATTAGGAAGAGTCTCTTTGATC +
Preference number: 6 (lower is better)
Translates to: SVQQFTTSSRAS*ATRTLGRVSLI
Trigger: GATCAAAGAGACTCTTCCTAATGTCCGGGTGGCCAACGATGCTCGAGAGCTGGTGGTGAACTGCTGCACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370267.1
ENST00000370272.9
CDS CAA 90 bp AAGCTGGGCTTGTTGGGCAGCTTGCTGCATTTGAAGCCATTCCTGTaGGGCCAATTCTGCTTGTTGCTGTCTAGCCTCTCCGCTGGTCAT +
Preference number: 6 (lower is better)
Translates to: KLGLLGSLLHLKPFL*GQFCLLLSSLSAGH
Trigger: ATGACCAGCGGAGAGGCTAGACAGCAACAAGCAGAATTGGCCCAACAGGAATGGCTTCAAATGCAGCAAGCTGCCCAACAAGCCCAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481583.1
CDS CAA 72 bp GGGAACACTCGCGTGTGTGAGAGATTTAGGATGAGTTaGGGAAGAAAGTGGGGGCCCGAGGATTCTAGAGAG +
Preference number: 6 (lower is better)
Translates to: GNTRVCERFRMS*GRKWGPEDSRE
Trigger: CTCTCTAGAATCCTCGGGCCCCCACTTTCTTCCCAAACTCATCCTAAATCTCTCACACACGCGAGTGTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370267.1
ENST00000370272.9
CDS CAA 72 bp AGCAGCAAGCTGGGCTTGTTGGGCAGCTTGCTGCATTaGAAGCCATTCCTGTTGGGCCAATTCTGCTTGTTG +
Preference number: 6 (lower is better)
Translates to: SSKLGLLGSLLH*KPFLLGQFCLL
Trigger: CAACAAGCAGAATTGGCCCAACAGGAATGGCTTCAAATGCAGCAAGCTGCCCAACAAGCCCAGCTTGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370267.1
ENST00000370272.9
ENST00000481583.1
CDS CAA 72 bp CTGCATTTGAAGCCATTCCTGTTGGGCCAATTCTGCTaGTTGCTGTCTAGCCTCTCCGCTGGTCATCCTCAC +
Preference number: 6 (lower is better)
Translates to: LHLKPFLLGQFC*LLSSLSAGHPH
Trigger: GTGAGGATGACCAGCGGAGAGGCTAGACAGCAACAAGCAGAATTGGCCCAACAGGAATGGCTTCAAATGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481583.1
CDS GCA 72 bp TTGCTGCATTTGAAGCCATTCCTGTTGGGCCAATTCTaGTTGTTGCTGTCTAGCCTCTCCGCTGGTCATCCT +
Preference number: 6 (lower is better)
Translates to: LLHLKPFLLGQF*LLLSSLSAGHP
Trigger: AGGATGACCAGCGGAGAGGCTAGACAGCAACAAGCAGAATTGGCCCAACAGGAATGGCTTCAAATGCAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481583.1
CDS CAA 72 bp TTGTTGGGCAGCTTGCTGCATTTGAAGCCATTCCTGTaGGGCCAATTCTGCTTGTTGCTGTCTAGCCTCTCC +
Preference number: 6 (lower is better)
Translates to: LLGSLLHLKPFL*GQFCLLLSSLS
Trigger: GGAGAGGCTAGACAGCAACAAGCAGAATTGGCCCAACAGGAATGGCTTCAAATGCAGCAAGCTGCCCAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481583.1
CDS CAA 90 bp ATCATTTTATTGATAGCAGCTCTGGGGATAGTGAGATCATCATCGTaGCCAGACGAGGAAGCCATAGTACCTTCCTGTTTCTCGCGCCCC +
Preference number: 6 (lower is better)
Translates to: IILLIAALGIVRSSS*PDEEAIVPSCFSRP
Trigger: GGGGCGCGAGAAACAGGAAGGTACTATGGCTTCCTCGTCTGGCAACGATGATGATCTCACTATCCCCAGAGCTGCTATCAATAAAATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370267.1
ENST00000370272.9
CDS CAA 72 bp TTGATAGCAGCTCTGGGGATAGTGAGATCATCATCGTaGCCAGACGAGGAAGCCATAGTACCTTCCTGTTTC +
Preference number: 6 (lower is better)
Translates to: LIAALGIVRSSS*PDEEAIVPSCF
Trigger: GAAACAGGAAGGTACTATGGCTTCCTCGTCTGGCAACGATGATGATCTCACTATCCCCAGAGCTGCTATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370267.1
ENST00000370272.9
CDS CAA 72 bp TTGTTGGGCAGCTTGCTGCATTTGAAGCCATTCCTGTaGGGCCAATTCTGCTTGTTGCTGTCTAGCTTTTGC +
Preference number: 6 (lower is better)
Translates to: LLGSLLHLKPFL*GQFCLLLSSFC
Trigger: GCAAAAGCTAGACAGCAACAAGCAGAATTGGCCCAACAGGAATGGCTTCAAATGCAGCAAGCTGCCCAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370267.1
ENST00000370272.9
CDS GCA 72 bp ATTCTTGTTGCTGTCTCAATAACTCTTCTTCAGGAATaGCAAGGTTTTCCAAACGAGAACTGGCCTTTCTTC +
Preference number: 6 (lower is better)
Translates to: ILVAVSITLLQE*QGFPNENWPFF
Trigger: GAAGAAAGGCCAGTTCTCGTTTGGAAAACCTTGGCATTCCTGAAGAAGAGTTATTGAGACAGCAACAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370267.1
ENST00000370272.9
CDS CAA 72 bp ATGACATGCTCTGGTGAGATGGTCTTCTTTTCCGATTaGTTACAAATCTCATTGGCTTCAGAAGATATAAGG +
Preference number: 6 (lower is better)
Translates to: MTCSGEMVFFSD*LQISLASEDIR
Trigger: CCTTATATCTTCTGAAGCCAATGAGATTTGTAACAAATCGGAAAAGAAGACCATCTCACCAGAGCATGTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370267.1
ENST00000370272.9
CDS TCA 72 bp CTGTTTTACACTCTTGCAAGACTTCTTTTACTTCACTaGTGTAAGAGCCAAATCCCAAACTTTCTAGTGCTT +
Preference number: 6 (lower is better)
Translates to: LFYTLARLLLLH*CKSQIPNFLVL
Trigger: AAGCACTAGAAAGTTTGGGATTTGGCTCTTACATCAGTGAAGTAAAAGAAGTCTTGCAAGAGTGTAAAACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370267.1
ENST00000370272.9