RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DPYSL5 (Homo sapiens)

Ensembl gene IDs: ENSG00000157851

Ensembl transcript IDs: ENST00000288699.11, ENST00000401478.5, ENST00000431402.5, ENST00000434719.1, ENST00000450961.5, ENST00000484882.1, ENST00000614712.4

Found 563 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGCAGGGAGGGCCCACCTGGATGGACAGGGGAGAAGATGAGGCCATaGGCTGGCAAGGGCCTGGTGCCGACCACGGGAGATCACGGCACC +
Preference number: 1 (lower is better)
Translates to: SREGPPGWTGEKMRP*AGKGLVPTTGDHGT
Trigger: GGTGCCGTGATCTCCCGTGGTCGGCACCAGGCCCTTGCCAGCTCATGGCCTCATCTTCTCCCCTGTCCATCCAGGTGGGCCCTCCCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR CCA 90 bp GGAGGGCCCACCTGGATGGACAGGGGAGAAGATGAGGCCATGAGCTaGCAAGGGCCTGGTGCCGACCACGGGAGATCACGGCACCTGAGC +
Preference number: 1 (lower is better)
Translates to: GGPTWMDRGEDEAMS*QGPGADHGRSRHLS
Trigger: GCTCAGGTGCCGTGATCTCCCGTGGTCGGCACCAGGCCCTTGCCAGCTCATGGCCTCATCTTCTCCCCTGTCCATCCAGGTGGGCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR CCA 90 bp ATCACGGCACCTGAGCAGCAATGCGGGTTCGACAGCCAGGTCCTGTaGGCCTGGGGTCTCCCTCTCTGGTGTCTGGCAAGCCCCTCTCCC +
Preference number: 1 (lower is better)
Translates to: ITAPEQQCGFDSQVL*AWGLPLWCLASPSP
Trigger: GGGAGAGGGGCTTGCCAGACACCAGAGAGGGAGACCCCAGGCCCACAGGACCTGGCTGTCGAACCCGCATTGCTGCTCAGGTGCCGTGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR TCA 90 bp GCTTTAGAAGCAGGGAGGGCCCACCTGGATGGACAGGGGAGAAGATaGGGCCATGAGCTGGCAAGGGCCTGGTGCCGACCACGGGAGATC +
Preference number: 1 (lower is better)
Translates to: ALEAGRAHLDGQGRR*GHELARAWCRPREI
Trigger: GATCTCCCGTGGTCGGCACCAGGCCCTTGCCAGCTCATGGCCTCATCTTCTCCCCTGTCCATCCAGGTGGGCCCTCCCTGCTTCTAAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR TCA 90 bp AGGATGCTCTGCCCAGCTGGCCACCACCGCTGCTGCTGGGCTCTTTaGCATCTGCCCAAGGCCCATGACCCAGTGAGGGCTGACAGGGAT +
Preference number: 1 (lower is better)
Translates to: RMLCPAGHHRCCWAL*HLPKAHDPVRADRD
Trigger: ATCCCTGTCAGCCCTCACTGGGTCATGGGCCTTGGGCAGATGTCAAAGAGCCCAGCAGCAGCGGTGGTGGCCAGCTGGGCAGAGCATCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR CCA 90 bp CTCTGGGCAACTGGCCAGTCAGCCAGGGGGCAGGGCACTAAAGTCTaGGCTTTCCCAAAGCCAGCGGAGGCAGGAGTGAGAGGAAGGGCT +
Preference number: 1 (lower is better)
Translates to: LWATGQSARGQGTKV*AFPKPAEAGVRGRA
Trigger: AGCCCTTCCTCTCACTCCTGCCTCCGCTGGCTTTGGGAAAGCCCAGACTTTAGTGCCCTGCCCCCTGGCTGACTGGCCAGTTGCCCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR TCA 90 bp GCAACCAGAGACCCTTTCGTTCCAACCAGGAGCCAGTGGGGCTGGTaGCGAAGCTGGCTGGAGCTCTGCACGGGGCAAGGAGTGCATGGT +
Preference number: 1 (lower is better)
Translates to: ATRDPFVPTRSQWGW*RSWLELCTGQGVHG
Trigger: ACCATGCACTCCTTGCCCCGTGCAGAGCTCCAGCCAGCTTCGTCACCAGCCCCACTGGCTCCTGGTTGGAACGAAAGGGTCTCTGGTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR GCA 90 bp GCCCATGACCCAGTGAGGGCTGACAGGGATAGAGATGGTGTGCACTaGACCAGGAGGCGGCGTCATGGTTTCCCCCATCCCTGGTGGCTT +
Preference number: 1 (lower is better)
Translates to: AHDPVRADRDRDGVH*TRRRRHGFPHPWWL
Trigger: AAGCCACCAGGGATGGGGGAAACCATGACGCCGCCTCCTGGTGCAGTGCACACCATCTCTATCCCTGTCAGCCCTCACTGGGTCATGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR TCA 90 bp GCTGCTGCTGGGCTCTTTGACATCTGCCCAAGGCCCATGACCCAGTaGGGGCTGACAGGGATAGAGATGGTGTGCACTGCACCAGGAGGC +
Preference number: 1 (lower is better)
Translates to: AAAGLFDICPRPMTQ*GLTGIEMVCTAPGG
Trigger: GCCTCCTGGTGCAGTGCACACCATCTCTATCCCTGTCAGCCCTCACTGGGTCATGGGCCTTGGGCAGATGTCAAAGAGCCCAGCAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR TCA 90 bp AAGCTCCCGGGCAAGGGTAGGGCCTATGTAGGGACTGGGGGTGGATaGAGCGCATGGCCTACAGTGGACCACTCCAAGACGTGGTTCCCT +
Preference number: 1 (lower is better)
Translates to: KLPGKGRAYVGTGGG*SAWPTVDHSKTWFP
Trigger: AGGGAACCACGTCTTGGAGTGGTCCACTGTAGGCCATGCGCTTCATCCACCCCCAGTCCCTACATAGGCCCTACCCTTGCCCGGGAGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR CCA 90 bp AGGGCCAGAGGTGGGTTGGGGGAGATAGGACGTCCTGGGCATGGCTaGGAAGCTGACATCTGTCTGACTTGGGAAATGTCACCACGGGGC +
Preference number: 1 (lower is better)
Translates to: RARGGLGEIGRPGHG*EADICLTWEMSPRG
Trigger: GCCCCGTGGTGACATTTCCCAAGTCAGACAGATGTCAGCTTCCCAGCCATGCCCAGGACGTCCTATCTCCCCCAACCCACCTCTGGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR TCA 90 bp AGGTGGGTTGGGGGAGATAGGACGTCCTGGGCATGGCTGGGAAGCTaGCATCTGTCTGACTTGGGAAATGTCACCACGGGGCCTAAGGGG +
Preference number: 1 (lower is better)
Translates to: RWVGGDRTSWAWLGS*HLSDLGNVTTGPKG
Trigger: CCCCTTAGGCCCCGTGGTGACATTTCCCAAGTCAGACAGATGTCAGCTTCCCAGCCATGCCCAGGACGTCCTATCTCCCCCAACCCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR GCA 90 bp AAGCGCATGGCCTACAGTGGACCACTCCAAGACGTGGTTCCCTGGTaGCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGT +
Preference number: 1 (lower is better)
Translates to: KRMAYSGPLQDVVPW*HGSHISQAEALREG
Trigger: ACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAACCACGTCTTGGAGTGGTCCACTGTAGGCCATGCGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR TCA 90 bp AGAAGCCTCGCGCAAGCCTCGGGGGCTGAAATCACATGTGCAACATaGAGTCACTTCCCACGGGGCAGACCAGGCTTAACAAGGGCAGGC +
Preference number: 1 (lower is better)
Translates to: RSLAQASGAEITCAT*SHFPRGRPGLTRAG
Trigger: GCCTGCCCTTGTTAAGCCTGGTCTGCCCCGTGGGAAGTGACTTCATGTTGCACATGTGATTTCAGCCCCCGAGGCTTGCGCGAGGCTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR CCA 90 bp ATGAAGCGCATGGCCTACAGTGGACCACTCCAAGACGTGGTTCCCTaGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAA +
Preference number: 1 (lower is better)
Translates to: MKRMAYSGPLQDVVP*CHGSHISQAEALRE
Trigger: TTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAACCACGTCTTGGAGTGGTCCACTGTAGGCCATGCGCTTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR CCA 90 bp GGGGGAGGAGGCCTTTACTTTGAAACCACATCTGCTAAAGTGCTCTaGGCAACTGGCCAGTCAGCCAGGGGGCAGGGCACTAAAGTCTGG +
Preference number: 1 (lower is better)
Translates to: GGGGLYFETTSAKVL*ATGQSARGQGTKVW
Trigger: CCAGACTTTAGTGCCCTGCCCCCTGGCTGACTGGCCAGTTGCCCAGAGCACTTTAGCAGATGTGGTTTCAAAGTAAAGGCCTCCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR CCA 90 bp AGATCACTGGAGGTGGAAGGAGACACCCGGCCTCTAGTGTTTCCATaGGAACTTCTGTGGGGCTTTAGAAGCAGGGAGGGCCCACCTGGA +
Preference number: 1 (lower is better)
Translates to: RSLEVEGDTRPLVFP*ELLWGFRSREGPPG
Trigger: TCCAGGTGGGCCCTCCCTGCTTCTAAAGCCCCACAGAAGTTCCCATGGAAACACTAGAGGCCGGGTGTCTCCTTCCACCTCCAGTGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR CCA 90 bp GCTGTGCCTGCGCCTCAGCAGCTGGAGGGGGTTTGGGTTTCCTTGTaGTTCTGTGGCTTCTGGGTCAGTATCAGAAAAGCCCTCATCACG +
Preference number: 1 (lower is better)
Translates to: AVPAPQQLEGVWVSL*FCGFWVSIRKALIT
Trigger: CGTGATGAGGGCTTTTCTGATACTGACCCAGAAGCCACAGAACCACAAGGAAACCCAAACCCCCTCCAGCTGCTGAGGCGCAGGCACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR CCA 90 bp TGCGCCTCAGCAGCTGGAGGGGGTTTGGGTTTCCTTGTGGTTCTGTaGCTTCTGGGTCAGTATCAGAAAAGCCCTCATCACGACATCGGC +
Preference number: 1 (lower is better)
Translates to: CASAAGGGLGFLVVL*LLGQYQKSPHHDIG
Trigger: GCCGATGTCGTGATGAGGGCTTTTCTGATACTGACCCAGAAGCCACAGAACCACAAGGAAACCCAAACCCCCTCCAGCTGCTGAGGCGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR GCA 90 bp GGAGCGCTGAGTCTCTGTCCAGCAGGAAGAAGTTATAGGAAGCCGTaGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGC +
Preference number: 1 (lower is better)
Translates to: GALSLCPAGRSYRKP*VCVCVCVCVCVCGG
Trigger: GCCACCACACACACACACACACACACACACACACACACACACGCACGGCTTCCTATAACTTCTTCCTGCTGGACAGAGACTCAGCGCTCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR CCA 90 bp TCAGAAAAGCCCTCATCACGACATCGGCTTGACAGAGACCTACTGTaGACTCCTAGCACTACACACACGCACGCACACGCACACACAGTA +
Preference number: 1 (lower is better)
Translates to: SEKPSSRHRLDRDLL*TPSTTHTHAHAHTV
Trigger: TACTGTGTGTGCGTGTGCGTGCGTGTGTGTAGTGCTAGGAGTCCACAGTAGGTCTCTGTCAAGCCGATGTCGTGATGAGGGCTTTTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR TCA 90 bp GAGGGTGTGGACGCAGCTCACACTGCACGGTTAGCCCCCAATGGGTaGCTAGTCTTGGCTCAAACACAGAATGTGCATGAGGTTGTTTAT +
Preference number: 1 (lower is better)
Translates to: EGVDAAHTARLAPNG*LVLAQTQNVHEVVY
Trigger: ATAAACAACCTCATGCACATTCTGTGTTTGAGCCAAGACTAGTCACCCATTGGGGGCTAACCGTGCAGTGTGAGCTGCGTCCACACCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR CCA 90 bp ACCAGAACACAACGTGTCGGGCTGTTTAGTTTTTGCCTCAAACGGTaGCCAAAGCACAGGACCATGTGTCGTCTTGGGGTTGACACAGTC +
Preference number: 1 (lower is better)
Translates to: TRTQRVGLFSFCLKR*PKHRTMCRLGVDTV
Trigger: GACTGTGTCAACCCCAAGACGACACATGGTCCTGTGCTTTGGCCACCGTTTGAGGCAAAAACTAAACAGCCCGACACGTTGTGTTCTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR GCA 90 bp ATACAAACCTGCACCAGAACACAACGTGTCGGGCTGTTTAGTTTTTaGCTCAAACGGTGGCCAAAGCACAGGACCATGTGTCGTCTTGGG +
Preference number: 1 (lower is better)
Translates to: IQTCTRTQRVGLFSF*LKRWPKHRTMCRLG
Trigger: CCCAAGACGACACATGGTCCTGTGCTTTGGCCACCGTTTGAGGCAAAAACTAAACAGCCCGACACGTTGTGTTCTGGTGCAGGTTTGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR GCA 90 bp AGGATGCACAAACAAGTCAAACCAAACTACTGCGCAAACCAAACGTaGAAAACAAAACCATTTACACGCGCCTGGCACCAGCCTCGAGCC +
Preference number: 1 (lower is better)
Translates to: RMHKQVKPNYCANQT*KTKPFTRAWHQPRA
Trigger: GGCTCGAGGCTGGTGCCAGGCGCGTGTAAATGGTTTTGTTTTGCACGTTTGGTTTGCGCAGTAGTTTGGTTTGACTTGTTTGTGCATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR GCA 90 bp AGAACAACAGTATTTATTCAGCAAGTACAAGACCAGTTTGAGAGCTaGATTCAGTGCAACCAGAGACCCTTTCGTTCCAACCAGGAGCCA +
Preference number: 1 (lower is better)
Translates to: RTTVFIQQVQDQFES*IQCNQRPFRSNQEP
Trigger: TGGCTCCTGGTTGGAACGAAAGGGTCTCTGGTTGCACTGAATGCAGCTCTCAAACTGGTCTTGTACTTGCTGAATAAATACTGTTGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR CCA 90 bp TGCAAAACAAAGCAGGCTGCCTACCAGGAAAGTAAGTCTTCTCATTaGTTAAACTCTCAGGTGGGATCTACAATAGATGTCACCCCAGAC +
Preference number: 1 (lower is better)
Translates to: CKTKQAAYQESKSSH*LNSQVGSTIDVTPD
Trigger: GTCTGGGGTGACATCTATTGTAGATCCCACCTGAGAGTTTAACCAATGAGAAGACTTACTTTCCTGGTAGGCAGCCTGCTTTGTTTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR GCA 90 bp TTCCAATGGCTGCCACTTGCCATGAGCCCCTTCGCCACCTCTGCTCCCCGGCTGCCCCCTCGGGTGGTGTaGCACCCAGCCCAGCCTCTC +
Preference number: 2 (lower is better)
Translates to: FQWLPLAMSPFATSAPRLPPRVV*HPAQPL
Trigger: GAGAGGCTGGGCTGGGTGGCACACCACCCGAGGGGG...CAGCCGGGGAGCAGAGGTGGCGAAGGGGCTCATGGCAAGTGGCAGCCATTGGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CCA 90 bp GCTTTCCTAGCCCAAGCAAGGATGCTCTGCCCAGCTGGCCACCACCGCTGCTGCTGGAGAGTTGCGGGCTaGTGGCGGCGGTGCGTCCTC +
Preference number: 2 (lower is better)
Translates to: AFLAQARMLCPAGHHRCCWRVAG*WRRCVL
Trigger: GAGGACGCACCGCCGCCACCAGCCCGCAACTCTCCA...GCAGCAGCGGTGGTGGCCAGCTGGGCAGAGCATCCTTGCTTGGGCTAGGAAAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CCA 90 bp AGCTCTGCACGGGGCAAGGAGTGCATGGTGGGGGCTGACCGCTCATTTGGCTCCGGGCGCAGGAGAAGCTaGCGAGGGGCACCAGGAGTC +
Preference number: 2 (lower is better)
Translates to: SSARGKECMVGADRSFGSGRRRS*RGAPGV
Trigger: GACTCCTGGTGCCCCTCGCCAGCTTCTCCTGCGCCC...GGAGCCAAATGAGCGGTCAGCCCCCACCATGCACTCCTTGCCCCGTGCAGAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR TCA 90 bp GCTTTCCTAGCCCAAGCAAGGATGCTCTGCCCAGCTGGCCACCACCGCTGCTGCGGCTGCCACTTGCCATaGGCCCCTTCGCCACCTCTG +
Preference number: 2 (lower is better)
Translates to: AFLAQARMLCPAGHHRCCGCHLP*APSPPL
Trigger: CAGAGGTGGCGAAGGGGCTCATGGCAAGTGGCAGCC...GCAGCAGCGGTGGTGGCCAGCTGGGCAGAGCATCCTTGCTTGGGCTAGGAAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CCA 90 bp TTCCAATGGCTGCCACTTGCCATGAGCCCCTTCGCCACCTCTGCTCCCCGGCTGCCCTGCAGCTTCGGCTaGAGAGTTGCGGGCTGGTGG +
Preference number: 2 (lower is better)
Translates to: FQWLPLAMSPFATSAPRLPCSFG*RVAGWW
Trigger: CCACCAGCCCGCAACTCTCCAGCCGAAGCTGCAGGG...CAGCCGGGGAGCAGAGGTGGCGAAGGGGCTCATGGCAAGTGGCAGCCATTGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CCA 90 bp AGCTCTGCACGGGGCAAGGAGTGCATGGTGGGGGCTGACCGCTCATTTGGCTCCCCATTTACACGCGCCTaGCACCAGCCTCGAGCCCCG +
Preference number: 2 (lower is better)
Translates to: SSARGKECMVGADRSFGSPFTRA*HQPRAP
Trigger: CGGGGCTCGAGGCTGGTGCCAGGCGCGTGTAAATGG...GGAGCCAAATGAGCGGTCAGCCCCCACCATGCACTCCTTGCCCCGTGCAGAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR TCA 90 bp AGGGCCAGGGCCTCCCGCAGCCCAGAAGACTGCAGGCGGGGAAAAGAGAGGCCTGCATGGCTGGGAAGCTaGCATCTGTCTGACTTGGGA +
Preference number: 2 (lower is better)
Translates to: RARASRSPEDCRRGKERPAWLGS*HLSDLG
Trigger: TCCCAAGTCAGACAGATGTCAGCTTCCCAGCCATGC...AGGCCTCTCTTTTCCCCGCCTGCAGTCTTCTGGGCTGCGGGAGGCCCTGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR TCA 90 bp GTTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTCACCCGGCCAGGGGCTaGCCTTTAACCGAGGGTCCA +
Preference number: 2 (lower is better)
Translates to: VPWCHGSHISQAEALREGHPARG*PLTEGP
Trigger: TGGACCCTCGGTTAAAGGTCAGCCCCTGGCCGGGTG...ACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR GCA 90 bp GCTTTCCTAGCCCAAGCAAGGATGCTCTGCCCAGCTGGCCACCACCGCTGCTGCAGCCTCTCCTGCCCCTaGAGCTTCGGCTGGAGAGTT +
Preference number: 2 (lower is better)
Translates to: AFLAQARMLCPAGHHRCCSLSCP*SFGWRV
Trigger: AACTCTCCAGCCGAAGCTGCAGGGGCAGGAGAGGCT...GCAGCAGCGGTGGTGGCCAGCTGGGCAGAGCATCCTTGCTTGGGCTAGGAAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR GCA 90 bp GCTTTCCTAGCCCAAGCAAGGATGCTCTGCCCAGCTGGCCACCACCGCTGCTGCCCAATGGCTGCCACTTaGCATGAGCCCCTTCGCCAC +
Preference number: 2 (lower is better)
Translates to: AFLAQARMLCPAGHHRCCPMAAT*HEPLRH
Trigger: GTGGCGAAGGGGCTCATGGCAAGTGGCAGCCATTGG...GCAGCAGCGGTGGTGGCCAGCTGGGCAGAGCATCCTTGCTTGGGCTAGGAAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR GCA 90 bp GCTTTCCTAGCCCAAGCAAGGATGCTCTGCCCAGCTGGCCACCACCGCTGCTGCGGGATAGAGATGGTGTaGACTGCACCAGGAGGCGGC +
Preference number: 2 (lower is better)
Translates to: AFLAQARMLCPAGHHRCCGIEMV*TAPGGG
Trigger: GCCGCCTCCTGGTGCAGTGCACACCATCTCTATCCC...GCAGCAGCGGTGGTGGCCAGCTGGGCAGAGCATCCTTGCTTGGGCTAGGAAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CCA 90 bp AGGGCCAGGGCCTCCCGCAGCCCAGAAGACTGCAGGCGGGGAAAAGAGAGGCCTCAGGGCACTAAAGTCTaGGCTTTCCCAAAGCCAGCG +
Preference number: 2 (lower is better)
Translates to: RARASRSPEDCRRGKERPQGTKV*AFPKPA
Trigger: CGCTGGCTTTGGGAAAGCCCAGACTTTAGTGCCCTG...AGGCCTCTCTTTTCCCCGCCTGCAGTCTTCTGGGCTGCGGGAGGCCCTGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR TCA 90 bp GCTTTCCTAGCCCAAGCAAGGATGCTCTGCCCAGCTGGCCACCACCGCTGCTGCACACAGGAGGAGCGCTaGGTCTCTGTCCAGCAGGAA +
Preference number: 2 (lower is better)
Translates to: AFLAQARMLCPAGHHRCCTQEER*VSVQQE
Trigger: TTCCTGCTGGACAGAGACTCAGCGCTCCTCCTGTGT...GCAGCAGCGGTGGTGGCCAGCTGGGCAGAGCATCCTTGCTTGGGCTAGGAAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR GCA 90 bp TTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTACTGGCAAGGGCCTGGTaGCGACCACGGGAGATCACG +
Preference number: 2 (lower is better)
Translates to: FPGATGHTSLRRRHSEKVLARAW*RPREIT
Trigger: CGTGATCTCCCGTGGTCGGCACCAGGCCCTTGCCAG...TACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CCA 90 bp CGGGGGCTGAAATCACATGTGCAACATGAAGTCACTTCCCACGGGGCAGACCAGTGGAGAGTTGCGGGCTaGTGGCGGCGGTGCGTCCTC +
Preference number: 2 (lower is better)
Translates to: RGLKSHVQHEVTSHGADQWRVAG*WRRCVL
Trigger: GAGGACGCACCGCCGCCACCAGCCCGCAACTCTCCA...CTGGTCTGCCCCGTGGGAAGTGACTTCATGTTGCACATGTGATTTCAGCCCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CCA 90 bp GTTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTAGTGCTCTGGGCAACTaGCCAGTCAGCCAGGGGGCA +
Preference number: 2 (lower is better)
Translates to: VPWCHGSHISQAEALREGSALGN*PVSQGA
Trigger: TGCCCCCTGGCTGACTGGCCAGTTGCCCAGAGCACT...ACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CCA 90 bp AGGGCCAGGGCCTCCCGCAGCCCAGAAGACTGCAGGCGGGGAAAAGAGAGGCCTGACATCTGTCTGACTTaGGAAATGTCACCACGGGGC +
Preference number: 2 (lower is better)
Translates to: RARASRSPEDCRRGKERPDICLT*EMSPRG
Trigger: GCCCCGTGGTGACATTTCCCAAGTCAGACAGATGTC...AGGCCTCTCTTTTCCCCGCCTGCAGTCTTCTGGGCTGCGGGAGGCCCTGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CCA 90 bp GCTTTCCTAGCCCAAGCAAGGATGCTCTGCCCAGCTGGCCACCACCGCTGCTGCCGTCCTGGGCATGGCTaGGAAGCTGACATCTGTCTG +
Preference number: 2 (lower is better)
Translates to: AFLAQARMLCPAGHHRCCRPGHG*EADICL
Trigger: CAGACAGATGTCAGCTTCCCAGCCATGCCCAGGACG...GCAGCAGCGGTGGTGGCCAGCTGGGCAGAGCATCCTTGCTTGGGCTAGGAAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CCA 90 bp AGCTCTGCACGGGGCAAGGAGTGCATGGTGGGGGCTGACCGCTCATTTGGCTCCACAAGGGCAGGCGGCTaGGTCACTTCCCAGATCACT +
Preference number: 2 (lower is better)
Translates to: SSARGKECMVGADRSFGSTRAGG*VTSQIT
Trigger: AGTGATCTGGGAAGTGACCCAGCCGCCTGCCCTTGT...GGAGCCAAATGAGCGGTCAGCCCCCACCATGCACTCCTTGCCCCGTGCAGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CCA 90 bp AGCTCTGCACGGGGCAAGGAGTGCATGGTGGGGGCTGACCGCTCATTTGGCTCCCAAGACGTGGTTCCCTaGTGCCACGGGTCACACATC +
Preference number: 2 (lower is better)
Translates to: SSARGKECMVGADRSFGSQDVVP*CHGSHI
Trigger: GATGTGTGACCCGTGGCACCAGGGAACCACGTCTTG...GGAGCCAAATGAGCGGTCAGCCCCCACCATGCACTCCTTGCCCCGTGCAGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CCA 90 bp AGCTCTGCACGGGGCAAGGAGTGCATGGTGGGGGCTGACCGCTCATTTGGCTCCGCGCATGGCCTACAGTaGACCACTCCAAGACGTGGT +
Preference number: 2 (lower is better)
Translates to: SSARGKECMVGADRSFGSAHGLQ*TTPRRG
Trigger: ACCACGTCTTGGAGTGGTCCACTGTAGGCCATGCGC...GGAGCCAAATGAGCGGTCAGCCCCCACCATGCACTCCTTGCCCCGTGCAGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR TCA 90 bp GTTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTGGAGATCACGGCACCTaGGCAGCAATGCGGGTTCGA +
Preference number: 2 (lower is better)
Translates to: VPWCHGSHISQAEALREGGDHGT*AAMRVR
Trigger: TCGAACCCGCATTGCTGCTCAGGTGCCGTGATCTCC...ACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR GCA 90 bp AGAGCTGCATTCAGTGCAACCAGAGACCCTTTCGTTCCAACCAGGAGCCAGTGGCCCCTTCGCCACCTCTaGTCCCCGGCTGACCACCTC +
Preference number: 2 (lower is better)
Translates to: RAAFSATRDPFVPTRSQWPLRHL*SPADHL
Trigger: GAGGTGGTCAGCCGGGGAGCAGAGGTGGCGAAGGGG...CCACTGGCTCCTGGTTGGAACGAAAGGGTCTCTGGTTGCACTGAATGCAGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR GCA 90 bp ACAGAGACCTACTGTGGACTCCTAGCACTACACACACGCACGCACACGCACACAGCACGGGGCAAGGAGTaGATGGTGGGGGCTGACCGC +
Preference number: 2 (lower is better)
Translates to: TETYCGLLALHTRTHTHTARGKE*MVGADR
Trigger: GCGGTCAGCCCCCACCATGCACTCCTTGCCCCGTGC...TGTGTGCGTGTGCGTGCGTGTGTGTAGTGCTAGGAGTCCACAGTAGGTCTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CCA 90 bp CGGGGGCTGAAATCACATGTGCAACATGAAGTCACTTCCCACGGGGCAGACCAGAGAGTTGCGGGCTGGTaGCGGCGGTGCGTCCTCACT +
Preference number: 2 (lower is better)
Translates to: RGLKSHVQHEVTSHGADQRVAGW*RRCVLT
Trigger: AGTGAGGACGCACCGCCGCCACCAGCCCGCAACTCT...CTGGTCTGCCCCGTGGGAAGTGACTTCATGTTGCACATGTGATTTCAGCCCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CCA 90 bp TTCCAATGGCTGCCACTTGCCATGAGCCCCTTCGCCACCTCTGCTCCCCGGCTGTCTGCTAAAGTGCTCTaGGCAACTGGCCAGTCAGCC +
Preference number: 2 (lower is better)
Translates to: FQWLPLAMSPFATSAPRLSAKVL*ATGQSA
Trigger: GGCTGACTGGCCAGTTGCCCAGAGCACTTTAGCAGA...CAGCCGGGGAGCAGAGGTGGCGAAGGGGCTCATGGCAAGTGGCAGCCATTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CCA 90 bp GCTTTCCTAGCCCAAGCAAGGATGCTCTGCCCAGCTGGCCACCACCGCTGCTGCGTGTGTGTGTGTGTGTaGTGGCAGGTGAAGACAGGG +
Preference number: 2 (lower is better)
Translates to: AFLAQARMLCPAGHHRCCVCVCV*WQVKTG
Trigger: CCCTGTCTTCACCTGCCACCACACACACACACACAC...GCAGCAGCGGTGGTGGCCAGCTGGGCAGAGCATCCTTGCTTGGGCTAGGAAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CCA 90 bp TTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTACAGGAGGCGGCGTCATaGTTTCCCCCATCCCTGGTG +
Preference number: 2 (lower is better)
Translates to: FPGATGHTSLRRRHSEKVQEAAS*FPPSLV
Trigger: CACCAGGGATGGGGGAAACCATGACGCCGCCTCCTG...TACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR TCA 90 bp TTCCAATGGCTGCCACTTGCCATGAGCCCCTTCGCCACCTCTGCTCCCCGGCTGATCACATGTGCAACATaGAGTCACTTCCCACGGGGC +
Preference number: 2 (lower is better)
Translates to: FQWLPLAMSPFATSAPRLITCAT*SHFPRG
Trigger: GCCCCGTGGGAAGTGACTTCATGTTGCACATGTGAT...CAGCCGGGGAGCAGAGGTGGCGAAGGGGCTCATGGCAAGTGGCAGCCATTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR TCA 90 bp AGCTCTGCACGGGGCAAGGAGTGCATGGTGGGGGCTGACCGCTCATTTGGCTCCATCACATGTGCAACATaGAGTCACTTCCCACGGGGC +
Preference number: 2 (lower is better)
Translates to: SSARGKECMVGADRSFGSITCAT*SHFPRG
Trigger: GCCCCGTGGGAAGTGACTTCATGTTGCACATGTGAT...GGAGCCAAATGAGCGGTCAGCCCCCACCATGCACTCCTTGCCCCGTGCAGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR TCA 90 bp GTTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTATGGTCTCGATCTCCTaGCTCCATGATCCACCCGCC +
Preference number: 2 (lower is better)
Translates to: VPWCHGSHISQAEALREGMVSIS*LHDPPA
Trigger: GGCGGGTGGATCATGGAGTCAGGAGATCGAGACCAT...ACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR TCA 90 bp ACAGAGACCTACTGTGGACTCCTAGCACTACACACACGCACGCACACGCACACAGGCTGCCACTTGCCATaGGCCCCTTCGCCACCTCTG +
Preference number: 2 (lower is better)
Translates to: TETYCGLLALHTRTHTHTGCHLP*APSPPL
Trigger: CAGAGGTGGCGAAGGGGCTCATGGCAAGTGGCAGCC...TGTGTGCGTGTGCGTGCGTGTGTGTAGTGCTAGGAGTCCACAGTAGGTCTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR GCA 90 bp CCTGGTGCCGACCACGGGAGATCACGGCACCTGAGCAGCAATGCGGGTTCGACACCACATCTGCTAAAGTaGTCTGGGCAACTGGCCAGT +
Preference number: 2 (lower is better)
Translates to: PGADHGRSRHLSSNAGSTPHLLK*SGQLAS
Trigger: ACTGGCCAGTTGCCCAGAGCACTTTAGCAGATGTGG...TGTCGAACCCGCATTGCTGCTCAGGTGCCGTGATCTCCCGTGGTCGGCACCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR GCA 90 bp ACTGGAGGTGGAAGGAGACACCCGGCCTCTAGTGTTTCCATGGGAACTTCTGTGAGCCACCCCCATCCCTaGCCCTACACAGGGCCAGAG +
Preference number: 2 (lower is better)
Translates to: TGGGRRHPASSVSMGTSVSHPHP*PYTGPE
Trigger: CTCTGGCCCTGTGTAGGGGCAGGGATGGGGGTGGCT...CACAGAAGTTCCCATGGAAACACTAGAGGCCGGGTGTCTCCTTCCACCTCCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CCA 90 bp GTTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTGCTCTGTGCATAGTGTaGGCTTCCTGGGCCCCAGAA +
Preference number: 2 (lower is better)
Translates to: VPWCHGSHISQAEALREGALCIV*ASWAPE
Trigger: TTCTGGGGCCCAGGAAGCCCACACTATGCACAGAGC...ACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CCA 90 bp AGCTCTGCACGGGGCAAGGAGTGCATGGTGGGGGCTGACCGCTCATTTGGCTCCGACATCTGTCTGACTTaGGAAATGTCACCACGGGGC +
Preference number: 2 (lower is better)
Translates to: SSARGKECMVGADRSFGSDICLT*EMSPRG
Trigger: GCCCCGTGGTGACATTTCCCAAGTCAGACAGATGTC...GGAGCCAAATGAGCGGTCAGCCCCCACCATGCACTCCTTGCCCCGTGCAGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CCA 90 bp TTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTAACACAGGGCCAGAGGTaGGTTGGGGGAGATAGGACG +
Preference number: 2 (lower is better)
Translates to: FPGATGHTSLRRRHSEKVTQGQR*VGGDRT
Trigger: CGTCCTATCTCCCCCAACCCACCTCTGGCCCTGTGT...TACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CCA 90 bp TTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTACAGGGAGGGCCCACCTaGATGGACAGGGGAGAAGAT +
Preference number: 2 (lower is better)
Translates to: FPGATGHTSLRRRHSEKVQGGPT*MDRGED
Trigger: ATCTTCTCCCCTGTCCATCCAGGTGGGCCCTCCCTG...TACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CCA 90 bp TTCCAATGGCTGCCACTTGCCATGAGCCCCTTCGCCACCTCTGCTCCCCGGCTGCCATGGGAACTTCTGTaGGGCTTTAGAAGCAGGGAG +
Preference number: 2 (lower is better)
Translates to: FQWLPLAMSPFATSAPRLPWELL*GFRSRE
Trigger: CTCCCTGCTTCTAAAGCCCCACAGAAGTTCCCATGG...CAGCCGGGGAGCAGAGGTGGCGAAGGGGCTCATGGCAAGTGGCAGCCATTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CCA 90 bp GTTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTGGAGAAGTGAGGGTGTaGACGCAGCTCACACTGCAC +
Preference number: 2 (lower is better)
Translates to: VPWCHGSHISQAEALREGGEVRV*TQLTLH
Trigger: GTGCAGTGTGAGCTGCGTCCACACCCTCACTTCTCC...ACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR TCA 90 bp AGCTCTGCACGGGGCAAGGAGTGCATGGTGGGGGCTGACCGCTCATTTGGCTCCTGGGGTCAGAGGACCTaGACTTTCTGGGTCTTAGTT +
Preference number: 2 (lower is better)
Translates to: SSARGKECMVGADRSFGSWGQRT*TFWVLV
Trigger: AACTAAGACCCAGAAAGTTCAGGTCCTCTGACCCCA...GGAGCCAAATGAGCGGTCAGCCCCCACCATGCACTCCTTGCCCCGTGCAGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR TCA 90 bp AGCTCTGCACGGGGCAAGGAGTGCATGGTGGGGGCTGACCGCTCATTTGGCTCCTTAGCCCCCAATGGGTaGCTAGTCTTGGCTCAAACA +
Preference number: 2 (lower is better)
Translates to: SSARGKECMVGADRSFGSLAPNG*LVLAQT
Trigger: TGTTTGAGCCAAGACTAGTCACCCATTGGGGGCTAA...GGAGCCAAATGAGCGGTCAGCCCCCACCATGCACTCCTTGCCCCGTGCAGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR GCA 90 bp GCGCAAACCAAACGTGCAAAACAAAACCATTTACACGCGCCTGGCACCAGCCTCAGCCACCCCCATCCCTaGCCCTACACAGGGCCAGAG +
Preference number: 2 (lower is better)
Translates to: AQTKRAKQNHLHAPGTSLSHPHP*PYTGPE
Trigger: CTCTGGCCCTGTGTAGGGGCAGGGATGGGGGTGGCT...GAGGCTGGTGCCAGGCGCGTGTAAATGGTTTTGTTTTGCACGTTTGGTTTGCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR GCA 90 bp TTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTAAGAGATGGTGTGCACTaGACCAGGAGGCGGCGTCAT +
Preference number: 2 (lower is better)
Translates to: FPGATGHTSLRRRHSEKVRDGVH*TRRRRH
Trigger: ATGACGCCGCCTCCTGGTGCAGTGCACACCATCTCT...TACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CCA 90 bp GCGCAAACCAAACGTGCAAAACAAAACCATTTACACGCGCCTGGCACCAGCCTCAGAGTTGCGGGCTGGTaGCGGCGGTGCGTCCTCACT +
Preference number: 2 (lower is better)
Translates to: AQTKRAKQNHLHAPGTSLRVAGW*RRCVLT
Trigger: AGTGAGGACGCACCGCCGCCACCAGCCCGCAACTCT...GAGGCTGGTGCCAGGCGCGTGTAAATGGTTTTGTTTTGCACGTTTGGTTTGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CCA 90 bp AGAGCTGCATTCAGTGCAACCAGAGACCCTTTCGTTCCAACCAGGAGCCAGTGGAGTGCTCTGGGCAACTaGCCAGTCAGCCAGGGGGCA +
Preference number: 2 (lower is better)
Translates to: RAAFSATRDPFVPTRSQWSALGN*PVSQGA
Trigger: TGCCCCCTGGCTGACTGGCCAGTTGCCCAGAGCACT...CCACTGGCTCCTGGTTGGAACGAAAGGGTCTCTGGTTGCACTGAATGCAGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CCA 90 bp TTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTAGGAGAAGTGAGGGTGTaGACGCAGCTCACACTGCAC +
Preference number: 2 (lower is better)
Translates to: FPGATGHTSLRRRHSEKVGEVRV*TQLTLH
Trigger: GTGCAGTGTGAGCTGCGTCCACACCCTCACTTCTCC...TACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CCA 90 bp GTTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTTCACCCCTGTTCCAATaGCTGCCACTTGCCATGAGC +
Preference number: 2 (lower is better)
Translates to: VPWCHGSHISQAEALREGSPLFQ*LPLAMS
Trigger: GCTCATGGCAAGTGGCAGCCATTGGAACAGGGGTGA...ACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CCA 90 bp AGAGCTGCATTCAGTGCAACCAGAGACCCTTTCGTTCCAACCAGGAGCCAGTGGGGTGACGAAGCTGGCTaGAGCTCTGCACGGGGCAAG +
Preference number: 2 (lower is better)
Translates to: RAAFSATRDPFVPTRSQWGDEAG*SSARGK
Trigger: CTTGCCCCGTGCAGAGCTCCAGCCAGCTTCGTCACC...CCACTGGCTCCTGGTTGGAACGAAAGGGTCTCTGGTTGCACTGAATGCAGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR CAA 90 bp CAGGCTGTGCCTGCGCCTCAGCAGCTGGAGGGGGTTTGGGTTTCCTaGTGGTTCTGTGGCTTCTGGGTCAGTATCAGAAAAGCCCTCATC +
Preference number: 2 (lower is better)
Translates to: QAVPAPQQLEGVWVS*WFCGFWVSIRKALI
Trigger: GATGAGGGCTTTTCTGATACTGACCCAGAAGCCACAGAACCACAAGGAAACCCAAACCCCCTCCAGCTGCTGAGGCGCAGGCACAGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR TCA 90 bp TTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTAGCATGGCTGGGAAGCTaGCATCTGTCTGACTTGGGA +
Preference number: 2 (lower is better)
Translates to: FPGATGHTSLRRRHSEKVAWLGS*HLSDLG
Trigger: TCCCAAGTCAGACAGATGTCAGCTTCCCAGCCATGC...TACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR TCA 90 bp AGAGCTGCATTCAGTGCAACCAGAGACCCTTTCGTTCCAACCAGGAGCCAGTGGAGGACACCTGCTTCCTaGAGGGCTGGCATCTCTGGG +
Preference number: 2 (lower is better)
Translates to: RAAFSATRDPFVPTRSQWRTPAS*RAGISG
Trigger: CCCAGAGATGCCAGCCCTTCAGGAAGCAGGTGTCCT...CCACTGGCTCCTGGTTGGAACGAAAGGGTCTCTGGTTGCACTGAATGCAGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR TCA 90 bp ACAGAGACCTACTGTGGACTCCTAGCACTACACACACGCACGCACACGCACACAGGAGATCACGGCACCTaGGCAGCAATGCGGGTTCGA +
Preference number: 2 (lower is better)
Translates to: TETYCGLLALHTRTHTHTGDHGT*AAMRVR
Trigger: TCGAACCCGCATTGCTGCTCAGGTGCCGTGATCTCC...TGTGTGCGTGTGCGTGCGTGTGTGTAGTGCTAGGAGTCCACAGTAGGTCTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR TCA 90 bp ACAGAGACCTACTGTGGACTCCTAGCACTACACACACGCACGCACACGCACACAGATCTCCTGACTCCATaGTCCACCCGCCTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: TETYCGLLALHTRTHTHTDLLTP*STRLGL
Trigger: GAGGCCAAGGCGGGTGGATCATGGAGTCAGGAGATC...TGTGTGCGTGTGCGTGCGTGTGTGTAGTGCTAGGAGTCCACAGTAGGTCTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR TCA 90 bp AGCTCTGCACGGGGCAAGGAGTGCATGGTGGGGGCTGACCGCTCATTTGGCTCCAGTGCTCCATTGTCATaGGGACTAAGTGAGAGGTCA +
Preference number: 2 (lower is better)
Translates to: SSARGKECMVGADRSFGSSAPLS*GLSERS
Trigger: TGACCTCTCACTTAGTCCTCATGACAATGGAGCACT...GGAGCCAAATGAGCGGTCAGCCCCCACCATGCACTCCTTGCCCCGTGCAGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR GCA 90 bp AGAGCTGCATTCAGTGCAACCAGAGACCCTTTCGTTCCAACCAGGAGCCAGTGGCGCAGCCCAGAAGACTaGAGGCGGGGAAAAGAGAGG +
Preference number: 2 (lower is better)
Translates to: RAAFSATRDPFVPTRSQWRSPED*RRGKER
Trigger: CCTCTCTTTTCCCCGCCTGCAGTCTTCTGGGCTGCG...CCACTGGCTCCTGGTTGGAACGAAAGGGTCTCTGGTTGCACTGAATGCAGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR GCA 90 bp ACAGAGACCTACTGTGGACTCCTAGCACTACACACACGCACGCACACGCACACAGCACCTGAGCAGCAATaGGGGTTCGACAGCCAGGTC +
Preference number: 2 (lower is better)
Translates to: TETYCGLLALHTRTHTHTAPEQQ*GFDSQV
Trigger: GACCTGGCTGTCGAACCCGCATTGCTGCTCAGGTGC...TGTGTGCGTGTGCGTGCGTGTGTGTAGTGCTAGGAGTCCACAGTAGGTCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR GCA 90 bp ACAGAGACCTACTGTGGACTCCTAGCACTACACACACGCACGCACACGCACACACCAATGGCTGCCACTTaGCATGAGCCCCTTCGCCAC +
Preference number: 2 (lower is better)
Translates to: TETYCGLLALHTRTHTHTPMAAT*HEPLRH
Trigger: GTGGCGAAGGGGCTCATGGCAAGTGGCAGCCATTGG...TGTGTGCGTGTGCGTGCGTGTGTGTAGTGCTAGGAGTCCACAGTAGGTCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CCA 90 bp GAAGCCTCGCGCAAGCCTCGGGGGCTGAAATCACATGTGCAACATGAAGTCACTACACAGGGCCAGAGGTaGGTTGGGGGAGATAGGACG +
Preference number: 2 (lower is better)
Translates to: EASRKPRGLKSHVQHEVTTQGQR*VGGDRT
Trigger: CGTCCTATCTCCCCCAACCCACCTCTGGCCCTGTGT...AGTGACTTCATGTTGCACATGTGATTTCAGCCCCCGAGGCTTGCGCGAGGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CCA 90 bp AGAGCTGCATTCAGTGCAACCAGAGACCCTTTCGTTCCAACCAGGAGCCAGTGGGAGGGCCCACCTGGATaGACAGGGGAGAAGATGAGG +
Preference number: 2 (lower is better)
Translates to: RAAFSATRDPFVPTRSQWEGPPG*TGEKMR
Trigger: CCTCATCTTCTCCCCTGTCCATCCAGGTGGGCCCTC...CCACTGGCTCCTGGTTGGAACGAAAGGGTCTCTGGTTGCACTGAATGCAGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CCA 90 bp ACTGGAGGTGGAAGGAGACACCCGGCCTCTAGTGTTTCCATGGGAACTTCTGTGCAGGGAGGGCCCACCTaGATGGACAGGGGAGAAGAT +
Preference number: 2 (lower is better)
Translates to: TGGGRRHPASSVSMGTSVQGGPT*MDRGED
Trigger: ATCTTCTCCCCTGTCCATCCAGGTGGGCCCTCCCTG...CACAGAAGTTCCCATGGAAACACTAGAGGCCGGGTGTCTCCTTCCACCTCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CCA 90 bp AGAGCTGCATTCAGTGCAACCAGAGACCCTTTCGTTCCAACCAGGAGCCAGTGGGACCACTCCAAGACGTaGTTCCCTGGTGCCACGGGT +
Preference number: 2 (lower is better)
Translates to: RAAFSATRDPFVPTRSQWDHSKT*FPGATG
Trigger: ACCCGTGGCACCAGGGAACCACGTCTTGGAGTGGTC...CCACTGGCTCCTGGTTGGAACGAAAGGGTCTCTGGTTGCACTGAATGCAGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR TCA 90 bp ACTGGAGGTGGAAGGAGACACCCGGCCTCTAGTGTTTCCATGGGAACTTCTGTGACACAGGAGGAGCGCTaGGTCTCTGTCCAGCAGGAA +
Preference number: 2 (lower is better)
Translates to: TGGGRRHPASSVSMGTSVTQEER*VSVQQE
Trigger: TTCCTGCTGGACAGAGACTCAGCGCTCCTCCTGTGT...CACAGAAGTTCCCATGGAAACACTAGAGGCCGGGTGTCTCCTTCCACCTCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CCA 90 bp ACAGAGACCTACTGTGGACTCCTAGCACTACACACACGCACGCACACGCACACAGCTCTGTGCATAGTGTaGGCTTCCTGGGCCCCAGAA +
Preference number: 2 (lower is better)
Translates to: TETYCGLLALHTRTHTHTALCIV*ASWAPE
Trigger: TTCTGGGGCCCAGGAAGCCCACACTATGCACAGAGC...TGTGTGCGTGTGCGTGCGTGTGTGTAGTGCTAGGAGTCCACAGTAGGTCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CCA 90 bp CGGGGGCTGAAATCACATGTGCAACATGAAGTCACTTCCCACGGGGCAGACCAGCAGGGCACTAAAGTCTaGGCTTTCCCAAAGCCAGCG +
Preference number: 2 (lower is better)
Translates to: RGLKSHVQHEVTSHGADQQGTKV*AFPKPA
Trigger: CGCTGGCTTTGGGAAAGCCCAGACTTTAGTGCCCTG...CTGGTCTGCCCCGTGGGAAGTGACTTCATGTTGCACATGTGATTTCAGCCCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CCA 90 bp GAAGCCTCGCGCAAGCCTCGGGGGCTGAAATCACATGTGCAACATGAAGTCACTCGTCCTGGGCATGGCTaGGAAGCTGACATCTGTCTG +
Preference number: 2 (lower is better)
Translates to: EASRKPRGLKSHVQHEVTRPGHG*EADICL
Trigger: CAGACAGATGTCAGCTTCCCAGCCATGCCCAGGACG...AGTGACTTCATGTTGCACATGTGATTTCAGCCCCCGAGGCTTGCGCGAGGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR GCA 90 bp GCTTTCCTAGCCCAAGCAAGGATGCTCTGCCCAGCTGGCCACCACCGCTGCTGCGTCAAACCAAACTACTaGGCAAACCAAACGTGCAAA +
Preference number: 2 (lower is better)
Translates to: AFLAQARMLCPAGHHRCCVKPNY*ANQTCK
Trigger: TTTGCACGTTTGGTTTGCGCAGTAGTTTGGTTTGAC...GCAGCAGCGGTGGTGGCCAGCTGGGCAGAGCATCCTTGCTTGGGCTAGGAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CCA 90 bp ACAGAGACCTACTGTGGACTCCTAGCACTACACACACGCACGCACACGCACACATCTGCTAAAGTGCTCTaGGCAACTGGCCAGTCAGCC +
Preference number: 2 (lower is better)
Translates to: TETYCGLLALHTRTHTHTSAKVL*ATGQSA
Trigger: GGCTGACTGGCCAGTTGCCCAGAGCACTTTAGCAGA...TGTGTGCGTGTGCGTGCGTGTGTGTAGTGCTAGGAGTCCACAGTAGGTCTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CCA 90 bp GAAGCCTCGCGCAAGCCTCGGGGGCTGAAATCACATGTGCAACATGAAGTCACTGTGTGTGTGTGTGTGTaGTGGCAGGTGAAGACAGGG +
Preference number: 2 (lower is better)
Translates to: EASRKPRGLKSHVQHEVTVCVCV*WQVKTG
Trigger: CCCTGTCTTCACCTGCCACCACACACACACACACAC...AGTGACTTCATGTTGCACATGTGATTTCAGCCCCCGAGGCTTGCGCGAGGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR GCA 90 bp ACAGAGACCTACTGTGGACTCCTAGCACTACACACACGCACGCACACGCACACATTCACGCTATTCTCCTaGCTCAGCCTCCTCAGTAGC +
Preference number: 2 (lower is better)
Translates to: TETYCGLLALHTRTHTHTFTLFS*LSLLSS
Trigger: GCTACTGAGGAGGCTGAGGCAGGAGAATAGCGTGAA...TGTGTGCGTGTGCGTGCGTGTGTGTAGTGCTAGGAGTCCACAGTAGGTCTCTGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR CAA 90 bp TGGCTTCTGGGTCAGTATCAGAAAAGCCCTCATCACGACATCGGCTaGACAGAGACCTACTGTGGACTCCTAGCACTACACACACGCACG +
Preference number: 2 (lower is better)
Translates to: WLLGQYQKSPHHDIG*TETYCGLLALHTRT
Trigger: CGTGCGTGTGTGTAGTGCTAGGAGTCCACAGTAGGTCTCTGTCAAGCCGATGTCGTGATGAGGGCTTTTCTGATACTGACCCAGAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR TCA 90 bp AGAGCTGCATTCAGTGCAACCAGAGACCCTTTCGTTCCAACCAGGAGCCAGTGGTTAGCCCCCAATGGGTaGCTAGTCTTGGCTCAAACA +
Preference number: 2 (lower is better)
Translates to: RAAFSATRDPFVPTRSQWLAPNG*LVLAQT
Trigger: TGTTTGAGCCAAGACTAGTCACCCATTGGGGGCTAA...CCACTGGCTCCTGGTTGGAACGAAAGGGTCTCTGGTTGCACTGAATGCAGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CCA 90 bp CTGTGCAAAACAAAGCAGGCTGCCTACCAGGAAAGTAAGTCTTCTCATTGGTTACCATTTACACGCGCCTaGCACCAGCCTCGAGCCCCG +
Preference number: 2 (lower is better)
Translates to: LCKTKQAAYQESKSSHWLPFTRA*HQPRAP
Trigger: CGGGGCTCGAGGCTGGTGCCAGGCGCGTGTAAATGG...TAACCAATGAGAAGACTTACTTTCCTGGTAGGCAGCCTGCTTTGTTTTGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CCA 90 bp ACAGAGACCTACTGTGGACTCCTAGCACTACACACACGCACGCACACGCACACACCCCCTTTTGGAATGTaGGAAACTAGACAAGGAGGG +
Preference number: 2 (lower is better)
Translates to: TETYCGLLALHTRTHTHTPPFGM*ETRQGG
Trigger: CCCTCCTTGTCTAGTTTCCCACATTCCAAAAGGGGG...TGTGTGCGTGTGCGTGCGTGTGTGTAGTGCTAGGAGTCCACAGTAGGTCTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR TCA 90 bp AGAGCTGCATTCAGTGCAACCAGAGACCCTTTCGTTCCAACCAGGAGCCAGTGGAGTGCTCCATTGTCATaGGGACTAAGTGAGAGGTCA +
Preference number: 2 (lower is better)
Translates to: RAAFSATRDPFVPTRSQWSAPLS*GLSERS
Trigger: TGACCTCTCACTTAGTCCTCATGACAATGGAGCACT...CCACTGGCTCCTGGTTGGAACGAAAGGGTCTCTGGTTGCACTGAATGCAGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CCA 90 bp GAAGCCTCGCGCAAGCCTCGGGGGCTGAAATCACATGTGCAACATGAAGTCACTCCTCTAGTGTTTCCATaGGAACTTCTGTGGGGCTTT +
Preference number: 2 (lower is better)
Translates to: EASRKPRGLKSHVQHEVTPLVFP*ELLWGF
Trigger: AAAGCCCCACAGAAGTTCCCATGGAAACACTAGAGG...AGTGACTTCATGTTGCACATGTGATTTCAGCCCCCGAGGCTTGCGCGAGGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CCA 90 bp ACAGAGACCTACTGTGGACTCCTAGCACTACACACACGCACGCACACGCACACACCTCTAGTGTTTCCATaGGAACTTCTGTGGGGCTTT +
Preference number: 2 (lower is better)
Translates to: TETYCGLLALHTRTHTHTPLVFP*ELLWGF
Trigger: AAAGCCCCACAGAAGTTCCCATGGAAACACTAGAGG...TGTGTGCGTGTGCGTGCGTGTGTGTAGTGCTAGGAGTCCACAGTAGGTCTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR TCA 90 bp CTGTGCAAAACAAAGCAGGCTGCCTACCAGGAAAGTAAGTCTTCTCATTGGTTAGGACAGGGGAGAAGATaGGGCCATGAGCTGGCAAGG +
Preference number: 2 (lower is better)
Translates to: LCKTKQAAYQESKSSHWLGQGRR*GHELAR
Trigger: CCTTGCCAGCTCATGGCCTCATCTTCTCCCCTGTCC...TAACCAATGAGAAGACTTACTTTCCTGGTAGGCAGCCTGCTTTGTTTTGCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR TCA 90 bp ACAGAGACCTACTGTGGACTCCTAGCACTACACACACGCACGCACACGCACACAGTCATGAGGACTAAGTaGGAGGTCATATACGGAAGT +
Preference number: 2 (lower is better)
Translates to: TETYCGLLALHTRTHTHTVMRTK*EVIYGS
Trigger: ACTTCCGTATATGACCTCTCACTTAGTCCTCATGAC...TGTGTGCGTGTGCGTGCGTGTGTGTAGTGCTAGGAGTCCACAGTAGGTCTCTGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR GCA 90 bp CTGTGCAAAACAAAGCAGGCTGCCTACCAGGAAAGTAAGTCTTCTCATTGGTTAAGCCTCTCCTGCCCCTaGAGCTTCGGCTGGAGAGTT +
Preference number: 2 (lower is better)
Translates to: LCKTKQAAYQESKSSHWLSLSCP*SFGWRV
Trigger: AACTCTCCAGCCGAAGCTGCAGGGGCAGGAGAGGCT...TAACCAATGAGAAGACTTACTTTCCTGGTAGGCAGCCTGCTTTGTTTTGCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR GCA 90 bp AGAAGTTATAGGAAGCCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCACAGTGAATCACTTTaGAGACATAGGGAGGGCTCC +
Preference number: 2 (lower is better)
Translates to: RSYRKPCVCVCVCVCVCVHSESL*RHREGS
Trigger: GGAGCCCTCCCTATGTCTGCAAAGTGATTCACTGTG...CACACACACACACACACACACACACACACACACGCACGGCTTCCTATAACTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CCA 90 bp CTGTGCAAAACAAAGCAGGCTGCCTACCAGGAAAGTAAGTCTTCTCATTGGTTAACAAGGGCAGGCGGCTaGGTCACTTCCCAGATCACT +
Preference number: 2 (lower is better)
Translates to: LCKTKQAAYQESKSSHWLTRAGG*VTSQIT
Trigger: AGTGATCTGGGAAGTGACCCAGCCGCCTGCCCTTGT...TAACCAATGAGAAGACTTACTTTCCTGGTAGGCAGCCTGCTTTGTTTTGCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR TCA 72 bp GCAGGGAGGGCCCACCTGGATGGACAGGGGAGAAGATaGGGCCATGAGCTGGCAAGGGCCTGGTGCCGACCA +
Preference number: 3 (lower is better)
Translates to: AGRAHLDGQGRR*GHELARAWCRP
Trigger: TGGTCGGCACCAGGCCCTTGCCAGCTCATGGCCTCATCTTCTCCCCTGTCCATCCAGGTGGGCCCTCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR GCA 72 bp TGCCGACCACGGGAGATCACGGCACCTGAGCAGCAATaGGGGTTCGACAGCCAGGTCCTGTGGGCCTGGGGT +
Preference number: 3 (lower is better)
Translates to: CRPREITAPEQQ*GFDSQVLWAWG
Trigger: ACCCCAGGCCCACAGGACCTGGCTGTCGAACCCGCATTGCTGCTCAGGTGCCGTGATCTCCCGTGGTCGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR GCA 72 bp ATGGCTGCCACTTGCCATGAGCCCCTTCGCCACCTCTaGTCCCCGGCTGACCACCTCTGTCCTCTCAGCCCC +
Preference number: 3 (lower is better)
Translates to: MAATCHEPLRHL*SPADHLCPLSP
Trigger: GGGGCTGAGAGGACAGAGGTGGTCAGCCGGGGAGCAGAGGTGGCGAAGGGGCTCATGGCAAGTGGCAGCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR CCA 72 bp CAACCAGGAGCCAGTGGGGCTGGTGACGAAGCTGGCTaGAGCTCTGCACGGGGCAAGGAGTGCATGGTGGGG +
Preference number: 3 (lower is better)
Translates to: QPGASGAGDEAG*SSARGKECMVG
Trigger: CCCCACCATGCACTCCTTGCCCCGTGCAGAGCTCCAGCCAGCTTCGTCACCAGCCCCACTGGCTCCTGGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR TCA 72 bp AAGGGCCTGGTGCCGACCACGGGAGATCACGGCACCTaGGCAGCAATGCGGGTTCGACAGCCAGGTCCTGTG +
Preference number: 3 (lower is better)
Translates to: KGLVPTTGDHGT*AAMRVRQPGPV
Trigger: CACAGGACCTGGCTGTCGAACCCGCATTGCTGCTCAGGTGCCGTGATCTCCCGTGGTCGGCACCAGGCCCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR TCA 72 bp TGCCCAGCTGGCCACCACCGCTGCTGCTGGGCTCTTTaGCATCTGCCCAAGGCCCATGACCCAGTGAGGGCT +
Preference number: 3 (lower is better)
Translates to: CPAGHHRCCWAL*HLPKAHDPVRA
Trigger: AGCCCTCACTGGGTCATGGGCCTTGGGCAGATGTCAAAGAGCCCAGCAGCAGCGGTGGTGGCCAGCTGGGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR GCA 72 bp CTGCAAGCTCCGCCTCCCGGGTTCACGCTATTCTCCTaGCTCAGCCTCCTCAGTAGCTGGGACTACAGGCGC +
Preference number: 3 (lower is better)
Translates to: LQAPPPGFTLFS*LSLLSSWDYRR
Trigger: GCGCCTGTAGTCCCAGCTACTGAGGAGGCTGAGGCAGGAGAATAGCGTGAACCCGGGAGGCGGAGCTTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR GCA 72 bp CCAGTGAGGGCTGACAGGGATAGAGATGGTGTGCACTaGACCAGGAGGCGGCGTCATGGTTTCCCCCATCCC +
Preference number: 3 (lower is better)
Translates to: PVRADRDRDGVH*TRRRRHGFPHP
Trigger: GGGATGGGGGAAACCATGACGCCGCCTCCTGGTGCAGTGCACACCATCTCTATCCCTGTCAGCCCTCACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR GCA 72 bp GCCTACAGTGGACCACTCCAAGACGTGGTTCCCTGGTaGCACGGGTCACACATCTCTCAGGCGGAGGCACTC +
Preference number: 3 (lower is better)
Translates to: AYSGPLQDVVPW*HGSHISQAEAL
Trigger: GAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAACCACGTCTTGGAGTGGTCCACTGTAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR CCA 72 bp ACTGGCCAGTCAGCCAGGGGGCAGGGCACTAAAGTCTaGGCTTTCCCAAAGCCAGCGGAGGCAGGAGTGAGA +
Preference number: 3 (lower is better)
Translates to: TGQSARGQGTKV*AFPKPAEAGVR
Trigger: TCTCACTCCTGCCTCCGCTGGCTTTGGGAAAGCCCAGACTTTAGTGCCCTGCCCCCTGGCTGACTGGCCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR TCA 72 bp GGCAAGGGTAGGGCCTATGTAGGGACTGGGGGTGGATaGAGCGCATGGCCTACAGTGGACCACTCCAAGACG +
Preference number: 3 (lower is better)
Translates to: GKGRAYVGTGGG*SAWPTVDHSKT
Trigger: CGTCTTGGAGTGGTCCACTGTAGGCCATGCGCTTCATCCACCCCCAGTCCCTACATAGGCCCTACCCTTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR CCA 72 bp ATGGCCTACAGTGGACCACTCCAAGACGTGGTTCCCTaGTGCCACGGGTCACACATCTCTCAGGCGGAGGCA +
Preference number: 3 (lower is better)
Translates to: MAYSGPLQDVVP*CHGSHISQAEA
Trigger: TGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAACCACGTCTTGGAGTGGTCCACTGTAGGCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR TCA 72 bp GGGGGAGATAGGACGTCCTGGGCATGGCTGGGAAGCTaGCATCTGTCTGACTTGGGAAATGTCACCACGGGG +
Preference number: 3 (lower is better)
Translates to: GGDRTSWAWLGS*HLSDLGNVTTG
Trigger: CCCCGTGGTGACATTTCCCAAGTCAGACAGATGTCAGCTTCCCAGCCATGCCCAGGACGTCCTATCTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR TCA 72 bp CCGAGGGTCCAGAAGCCTCGCGCAAGCCTCGGGGGCTaGAATCACATGTGCAACATGAAGTCACTTCCCACG +
Preference number: 3 (lower is better)
Translates to: PRVQKPRASLGG*NHMCNMKSLPT
Trigger: CGTGGGAAGTGACTTCATGTTGCACATGTGATTTCAGCCCCCGAGGCTTGCGCGAGGCTTCTGGACCCTCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR GCA 72 bp GAAGGTAAAGCTTTCCTAGCCCAAGCAAGGATGCTCTaGCCAGCTGGCCACCACCGCTGCTGCTGGGCTCTT +
Preference number: 3 (lower is better)
Translates to: EGKAFLAQARML*PAGHHRCCWAL
Trigger: AAGAGCCCAGCAGCAGCGGTGGTGGCCAGCTGGGCAGAGCATCCTTGCTTGGGCTAGGAAAGCTTTACCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR CCA 72 bp AGCTTTCCTAGCCCAAGCAAGGATGCTCTGCCCAGCTaGCCACCACCGCTGCTGCTGGGCTCTTTGACATCT +
Preference number: 3 (lower is better)
Translates to: SFPSPSKDALPS*PPPLLLGSLTS
Trigger: AGATGTCAAAGAGCCCAGCAGCAGCGGTGGTGGCCAGCTGGGCAGAGCATCCTTGCTTGGGCTAGGAAAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CAA 90 bp GCGCAAACCAAACGTGCAAAACAAAACCATTTACACGCGCCTGGCACCAGCCTCAGGGCCAGAGGTGGGTaGGGGGAGATAGGACGTCCT +
Preference number: 3 (lower is better)
Translates to: AQTKRAKQNHLHAPGTSLRARGG*GEIGRP
Trigger: AGGACGTCCTATCTCCCCCAACCCACCTCTGGCCCT...GAGGCTGGTGCCAGGCGCGTGTAAATGGTTTTGTTTTGCACGTTTGGTTTGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR TCA 72 bp GGGCTCTTTGACATCTGCCCAAGGCCCATGACCCAGTaGGGGCTGACAGGGATAGAGATGGTGTGCACTGCA +
Preference number: 3 (lower is better)
Translates to: GLFDICPRPMTQ*GLTGIEMVCTA
Trigger: TGCAGTGCACACCATCTCTATCCCTGTCAGCCCTCACTGGGTCATGGGCCTTGGGCAGATGTCAAAGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CAA 90 bp TTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTAATCCCAGGCCCCCTTTaGGAATGTGGGAAACTAGAC +
Preference number: 3 (lower is better)
Translates to: FPGATGHTSLRRRHSEKVIPGPL*ECGKLD
Trigger: GTCTAGTTTCCCACATTCCAAAAGGGGGCCTGGGAT...TACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR TCA 72 bp GCGCAAGCCTCGGGGGCTGAAATCACATGTGCAACATaGAGTCACTTCCCACGGGGCAGACCAGGCTTAACA +
Preference number: 3 (lower is better)
Translates to: AQASGAEITCAT*SHFPRGRPGLT
Trigger: TGTTAAGCCTGGTCTGCCCCGTGGGAAGTGACTTCATGTTGCACATGTGATTTCAGCCCCCGAGGCTTGCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR GCA 72 bp GAGGAGGCCTTTACTTTGAAACCACATCTGCTAAAGTaGTCTGGGCAACTGGCCAGTCAGCCAGGGGGCAGG +
Preference number: 3 (lower is better)
Translates to: EEAFTLKPHLLK*SGQLASQPGGR
Trigger: CCTGCCCCCTGGCTGACTGGCCAGTTGCCCAGAGCACTTTAGCAGATGTGGTTTCAAAGTAAAGGCCTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR CCA 72 bp GGTGGGTTGGGGGAGATAGGACGTCCTGGGCATGGCTaGGAAGCTGACATCTGTCTGACTTGGGAAATGTCA +
Preference number: 3 (lower is better)
Translates to: GGLGEIGRPGHG*EADICLTWEMS
Trigger: TGACATTTCCCAAGTCAGACAGATGTCAGCTTCCCAGCCATGCCCAGGACGTCCTATCTCCCCCAACCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR CCA 72 bp GCGCCTCAGCAGCTGGAGGGGGTTTGGGTTTCCTTGTaGTTCTGTGGCTTCTGGGTCAGTATCAGAAAAGCC +
Preference number: 3 (lower is better)
Translates to: APQQLEGVWVSL*FCGFWVSIRKA
Trigger: GGCTTTTCTGATACTGACCCAGAAGCCACAGAACCACAAGGAAACCCAAACCCCCTCCAGCTGCTGAGGCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CAA 90 bp GTTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTAAGTGCCTGTTAGAGTaGGCTCGAAGCACAGTGAAT +
Preference number: 3 (lower is better)
Translates to: VPWCHGSHISQAEALREGKCLLE*ARSTVN
Trigger: ATTCACTGTGCTTCGAGCCAACTCTAACAGGCACTT...ACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CAA 90 bp ACAGAGACCTACTGTGGACTCCTAGCACTACACACACGCACGCACACGCACACAATCCCAGGCCCCCTTTaGGAATGTGGGAAACTAGAC +
Preference number: 3 (lower is better)
Translates to: TETYCGLLALHTRTHTHTIPGPL*ECGKLD
Trigger: GTCTAGTTTCCCACATTCCAAAAGGGGGCCTGGGAT...TGTGTGCGTGTGCGTGCGTGTGTGTAGTGCTAGGAGTCCACAGTAGGTCTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR TCA 72 bp GACGCAGCTCACACTGCACGGTTAGCCCCCAATGGGTaGCTAGTCTTGGCTCAAACACAGAATGTGCATGAG +
Preference number: 3 (lower is better)
Translates to: DAAHTARLAPNG*LVLAQTQNVHE
Trigger: CTCATGCACATTCTGTGTTTGAGCCAAGACTAGTCACCCATTGGGGGCTAACCGTGCAGTGTGAGCTGCGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR CCA 72 bp TGTGGACGCAGCTCACACTGCACGGTTAGCCCCCAATaGGTGACTAGTCTTGGCTCAAACACAGAATGTGCA +
Preference number: 3 (lower is better)
Translates to: CGRSSHCTVSPQ*VTSLGSNTECA
Trigger: TGCACATTCTGTGTTTGAGCCAAGACTAGTCACCCATTGGGGGCTAACCGTGCAGTGTGAGCTGCGTCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR TCA 72 bp GTGGCCAAAGCACAGGACCATGTGTCGTCTTGGGGTTaGCACAGTCTTAGCACCATGACATTTACAGGGGAG +
Preference number: 3 (lower is better)
Translates to: VAKAQDHVSSWG*HSLSTMTFTGE
Trigger: CTCCCCTGTAAATGTCATGGTGCTAAGACTGTGTCAACCCCAAGACGACACATGGTCCTGTGCTTTGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR CCA 72 bp CAACGTGTCGGGCTGTTTAGTTTTTGCCTCAAACGGTaGCCAAAGCACAGGACCATGTGTCGTCTTGGGGTT +
Preference number: 3 (lower is better)
Translates to: QRVGLFSFCLKR*PKHRTMCRLGV
Trigger: AACCCCAAGACGACACATGGTCCTGTGCTTTGGCCACCGTTTGAGGCAAAAACTAAACAGCCCGACACGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CAA 90 bp ACTGGAGGTGGAAGGAGACACCCGGCCTCTAGTGTTTCCATGGGAACTTCTGTGAAGTGCCTGTTAGAGTaGGCTCGAAGCACAGTGAAT +
Preference number: 3 (lower is better)
Translates to: TGGGRRHPASSVSMGTSVKCLLE*ARSTVN
Trigger: ATTCACTGTGCTTCGAGCCAACTCTAACAGGCACTT...CACAGAAGTTCCCATGGAAACACTAGAGGCCGGGTGTCTCCTTCCACCTCCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CAA 90 bp AGAGCTGCATTCAGTGCAACCAGAGACCCTTTCGTTCCAACCAGGAGCCAGTGGGAGGAGGCCTTTACTTaGAAACCACATCTGCTAAAG +
Preference number: 3 (lower is better)
Translates to: RAAFSATRDPFVPTRSQWEEAFT*KPHLLK
Trigger: CTTTAGCAGATGTGGTTTCAAAGTAAAGGCCTCCTC...CCACTGGCTCCTGGTTGGAACGAAAGGGTCTCTGGTTGCACTGAATGCAGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CAA 90 bp CTGTGCAAAACAAAGCAGGCTGCCTACCAGGAAAGTAAGTCTTCTCATTGGTTATGCAGTGGCGTGATCTaGGCTCACTGCAAGCTCCGC +
Preference number: 3 (lower is better)
Translates to: LCKTKQAAYQESKSSHWLCSGVI*AHCKLR
Trigger: GCGGAGCTTGCAGTGAGCCAAGATCACGCCACTGCA...TAACCAATGAGAAGACTTACTTTCCTGGTAGGCAGCCTGCTTTGTTTTGCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR GCA 72 bp TGCACCAGAACACAACGTGTCGGGCTGTTTAGTTTTTaGCTCAAACGGTGGCCAAAGCACAGGACCATGTGT +
Preference number: 3 (lower is better)
Translates to: CTRTQRVGLFSF*LKRWPKHRTMC
Trigger: ACACATGGTCCTGTGCTTTGGCCACCGTTTGAGGCAAAAACTAAACAGCCCGACACGTTGTGTTCTGGTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR GCA 72 bp AAACAAGTCAAACCAAACTACTGCGCAAACCAAACGTaGAAAACAAAACCATTTACACGCGCCTGGCACCAG +
Preference number: 3 (lower is better)
Translates to: KQVKPNYCANQT*KTKPFTRAWHQ
Trigger: CTGGTGCCAGGCGCGTGTAAATGGTTTTGTTTTGCACGTTTGGTTTGCGCAGTAGTTTGGTTTGACTTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR-3UTR CAA 90 bp CTGTGCAAAACAAAGCAGGCTGCCTACCAGGAAAGTAAGTCTTCTCATTGGTTAGAGGAGGCCTTTACTTaGAAACCACATCTGCTAAAG +
Preference number: 3 (lower is better)
Translates to: LCKTKQAAYQESKSSHWLEEAFT*KPHLLK
Trigger: CTTTAGCAGATGTGGTTTCAAAGTAAAGGCCTCCTC...TAACCAATGAGAAGACTTACTTTCCTGGTAGGCAGCCTGCTTTGTTTTGCACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR GCA 72 bp GTATTTATTCAGCAAGTACAAGACCAGTTTGAGAGCTaGATTCAGTGCAACCAGAGACCCTTTCGTTCCAAC +
Preference number: 3 (lower is better)
Translates to: VFIQQVQDQFES*IQCNQRPFRSN
Trigger: GTTGGAACGAAAGGGTCTCTGGTTGCACTGAATGCAGCTCTCAAACTGGTCTTGTACTTGCTGAATAAATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR CCA 72 bp AAGCAGGCTGCCTACCAGGAAAGTAAGTCTTCTCATTaGTTAAACTCTCAGGTGGGATCTACAATAGATGTC +
Preference number: 3 (lower is better)
Translates to: KQAAYQESKSSH*LNSQVGSTIDV
Trigger: GACATCTATTGTAGATCCCACCTGAGAGTTTAACCAATGAGAAGACTTACTTTCCTGGTAGGCAGCCTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR TCA 72 bp TGTAAAATGGGAAGAATAATAAGTGCTCCATTGTCATaGGGACTAAGTGAGAGGTCATATACGGAAGTGGTT +
Preference number: 3 (lower is better)
Translates to: CKMGRIISAPLS*GLSERSYTEVV
Trigger: AACCACTTCCGTATATGACCTCTCACTTAGTCCTCATGACAATGGAGCACTTATTATTCTTCCCATTTTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp AGGGCCAGGGCCTCCCGCAGCCCAGAAGACTGCAGGCGGGGAAAAGAGAGGCCTTCAGGGGAGGCACCGTaGCATAGGCAGCCGCGTGGG +
Preference number: 4 (lower is better)
Translates to: RARASRSPEDCRRGKERPSGEAP*HRQPRG
Trigger: CCCACGCGGCTGCCTATGTCACGGTGCCTCCCCTGA...AGGCCTCTCTTTTCCCCGCCTGCAGTCTTCTGGGCTGCGGGAGGCCCTGGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp CCTGGTGCCGACCACGGGAGATCACGGCACCTGAGCAGCAATGCGGGTTCGACATCTCCTCCGAGATGCTaGGGCCGCGGGGGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: PGADHGRSRHLSSNAGSTSPPRC*GRGGPW
Trigger: CCACGGGCCCCCGCGGCCGCAGCATCTCGGAGGAGA...TGTCGAACCCGCATTGCTGCTCAGGTGCCGTGATCTCCCGTGGTCGGCACCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288699.11
CDS-3UTR GCA 90 bp TTCCAATGGCTGCCACTTGCCATGAGCCCCTTCGCCACCTCTGCTCCCCGGCTGTGTTCTCCTCCGAGATaGTGCGGCCGCGGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: FQWLPLAMSPFATSAPRLCSPPR*CGRGGP
Trigger: CGGGCCCCCGCGGCCGCAGCATCTCGGAGGAGAACA...CAGCCGGGGAGCAGAGGTGGCGAAGGGGCTCATGGCAAGTGGCAGCCATTGGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000288699.11
CDS-3UTR GCA 90 bp AGGGCCAGGGCCTCCCGCAGCCCAGAAGACTGCAGGCGGGGAAAAGAGAGGCCTGGGAAGTCACCTGGGTaGTGGGGTGCTGGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: RARASRSPEDCRRGKERPGKSPG*WGAGGS
Trigger: GGAGCCTCCAGCACCCCAGCACCCAGGTGACTTCCC...AGGCCTCTCTTTTCCCCGCCTGCAGTCTTCTGGGCTGCGGGAGGCCCTGGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp AGGGCCAGGGCCTCCCGCAGCCCAGAAGACTGCAGGCGGGGAAAAGAGAGGCCTCCATTTACACGCGCCTaGCACCAGCCTCGAGCCCCG +
Preference number: 4 (lower is better)
Translates to: RARASRSPEDCRRGKERPPFTRA*HQPRAP
Trigger: CGGGGCTCGAGGCTGGTGCCAGGCGCGTGTAAATGG...AGGCCTCTCTTTTCCCCGCCTGCAGTCTTCTGGGCTGCGGGAGGCCCTGGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp TTCCAATGGCTGCCACTTGCCATGAGCCCCTTCGCCACCTCTGCTCCCCGGCTGTCAGGGGAGGCACCGTaGCATAGGCAGCCGCGTGGG +
Preference number: 4 (lower is better)
Translates to: FQWLPLAMSPFATSAPRLSGEAP*HRQPRG
Trigger: CCCACGCGGCTGCCTATGTCACGGTGCCTCCCCTGA...CAGCCGGGGAGCAGAGGTGGCGAAGGGGCTCATGGCAAGTGGCAGCCATTGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp AGCTCTGCACGGGGCAAGGAGTGCATGGTGGGGGCTGACCGCTCATTTGGCTCCTCCCTCATGCCCCCATaGCGGGTGACGGGCCGGGTA +
Preference number: 4 (lower is better)
Translates to: SSARGKECMVGADRSFGSSLMPP*RVTGRV
Trigger: TACCCGGCCCGTCACCCGGCATGGGGGCATGAGGGA...GGAGCCAAATGAGCGGTCAGCCCCCACCATGCACTCCTTGCCCCGTGCAGAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp AGCTCTGCACGGGGCAAGGAGTGCATGGTGGGGGCTGACCGCTCATTTGGCTCCGCACGGGGCAAGGAGTaGATGGTGGGGGCTGACCGC +
Preference number: 4 (lower is better)
Translates to: SSARGKECMVGADRSFGSARGKE*MVGADR
Trigger: GCGGTCAGCCCCCACCATGCACTCCTTGCCCCGTGC...GGAGCCAAATGAGCGGTCAGCCCCCACCATGCACTCCTTGCCCCGTGCAGAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp CCTGGTGCCGACCACGGGAGATCACGGCACCTGAGCAGCAATGCGGGTTCGACATCCGACCCCAGGCTGTaGCTGCGCCTCAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PGADHGRSRHLSSNAGSTSDPRL*LRLSSW
Trigger: CCAGCTGCTGAGGCGCAGGCACAGCCTGGGGTCGGA...TGTCGAACCCGCATTGCTGCTCAGGTGCCGTGATCTCCCGTGGTCGGCACCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp AGGGCCAGGGCCTCCCGCAGCCCAGAAGACTGCAGGCGGGGAAAAGAGAGGCCTAGTGCTCTGGGCAACTaGCCAGTCAGCCAGGGGGCA +
Preference number: 4 (lower is better)
Translates to: RARASRSPEDCRRGKERPSALGN*PVSQGA
Trigger: TGCCCCCTGGCTGACTGGCCAGTTGCCCAGAGCACT...AGGCCTCTCTTTTCCCCGCCTGCAGTCTTCTGGGCTGCGGGAGGCCCTGGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp CCTGGTGCCGACCACGGGAGATCACGGCACCTGAGCAGCAATGCGGGTTCGACAGGGCGCAGGAGAAGCTaGCGAGGGGCACCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: PGADHGRSRHLSSNAGSTGRRRS*RGAPGV
Trigger: GACTCCTGGTGCCCCTCGCCAGCTTCTCCTGCGCCC...TGTCGAACCCGCATTGCTGCTCAGGTGCCGTGATCTCCCGTGGTCGGCACCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp AGGGCCAGGGCCTCCCGCAGCCCAGAAGACTGCAGGCGGGGAAAAGAGAGGCCTGGGGCAAGGAGTGCATaGTGGGGGCTGACCGCTCAT +
Preference number: 4 (lower is better)
Translates to: RARASRSPEDCRRGKERPGARSA*WGLTAH
Trigger: ATGAGCGGTCAGCCCCCACCATGCACTCCTTGCCCC...AGGCCTCTCTTTTCCCCGCCTGCAGTCTTCTGGGCTGCGGGAGGCCCTGGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp AGGGCCAGGGCCTCCCGCAGCCCAGAAGACTGCAGGCGGGGAAAAGAGAGGCCTAGTGGGGAAGTCACCTaGGTGCTGGGGTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: RARASRSPEDCRRGKERPSGEVT*VLGCWR
Trigger: CCTCCAGCACCCCAGCACCCAGGTGACTTCCCCACT...AGGCCTCTCTTTTCCCCGCCTGCAGTCTTCTGGGCTGCGGGAGGCCCTGGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp GCTTTCCTAGCCCAAGCAAGGATGCTCTGCCCAGCTGGCCACCACCGCTGCTGCCACCCGGCCAGGGGCTaGCCTTTAACCGAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: AFLAQARMLCPAGHHRCCHPARG*PLTEGP
Trigger: TGGACCCTCGGTTAAAGGTCAGCCCCTGGCCGGGTG...GCAGCAGCGGTGGTGGCCAGCTGGGCAGAGCATCCTTGCTTGGGCTAGGAAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp AGGGCCAGGGCCTCCCGCAGCCCAGAAGACTGCAGGCGGGGAAAAGAGAGGCCTTGTCCTCTCAGCCCCTaGGTGAGGAAAGGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: RARASRSPEDCRRGKERPCPLSP*VRKGGV
Trigger: CACTCCCCCTTTCCTCACTCAGGGGCTGAGAGGACA...AGGCCTCTCTTTTCCCCGCCTGCAGTCTTCTGGGCTGCGGGAGGCCCTGGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp AGGGCCAGGGCCTCCCGCAGCCCAGAAGACTGCAGGCGGGGAAAAGAGAGGCCTAGCTGGCTGGAGCTCTaGACGGGGCAAGGAGTGCAT +
Preference number: 4 (lower is better)
Translates to: RARASRSPEDCRRGKERPSWLEL*TGQGVH
Trigger: ATGCACTCCTTGCCCCGTGCAGAGCTCCAGCCAGCT...AGGCCTCTCTTTTCCCCGCCTGCAGTCTTCTGGGCTGCGGGAGGCCCTGGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp GCTTTCCTAGCCCAAGCAAGGATGCTCTGCCCAGCTGGCCACCACCGCTGCTGCGGGAAGTCACCTGGGTaGTGGGGTGCTGGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: AFLAQARMLCPAGHHRCCGKSPG*WGAGGS
Trigger: GGAGCCTCCAGCACCCCAGCACCCAGGTGACTTCCC...GCAGCAGCGGTGGTGGCCAGCTGGGCAGAGCATCCTTGCTTGGGCTAGGAAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp AGGGCCAGGGCCTCCCGCAGCCCAGAAGACTGCAGGCGGGGAAAAGAGAGGCCTAATCACAGCAGACCTTaGGGTCGGCCAGACCTCGGC +
Preference number: 4 (lower is better)
Translates to: RARASRSPEDCRRGKERPNHSRP*GRPDLG
Trigger: GCCGAGGTCTGGCCGACCCCAAGGTCTGCTGTGATT...AGGCCTCTCTTTTCCCCGCCTGCAGTCTTCTGGGCTGCGGGAGGCCCTGGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp AGGGCCAGGGCCTCCCGCAGCCCAGAAGACTGCAGGCGGGGAAAAGAGAGGCCTGCGTGGCATGTGCAGTaGTGGTCTCCGCCAGCACAA +
Preference number: 4 (lower is better)
Translates to: RARASRSPEDCRRGKERPAWHVQ*WSPPAQ
Trigger: TTGTGCTGGCGGAGACCACCACTGCACATGCCACGC...AGGCCTCTCTTTTCCCCGCCTGCAGTCTTCTGGGCTGCGGGAGGCCCTGGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp CCTGGTGCCGACCACGGGAGATCACGGCACCTGAGCAGCAATGCGGGTTCGACACCATTTACACGCGCCTaGCACCAGCCTCGAGCCCCG +
Preference number: 4 (lower is better)
Translates to: PGADHGRSRHLSSNAGSTPFTRA*HQPRAP
Trigger: CGGGGCTCGAGGCTGGTGCCAGGCGCGTGTAAATGG...TGTCGAACCCGCATTGCTGCTCAGGTGCCGTGATCTCCCGTGGTCGGCACCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp AGGGCCAGGGCCTCCCGCAGCCCAGAAGACTGCAGGCGGGGAAAAGAGAGGCCTCGCACGTGGCATTCATaGAGGTCTGGTGGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: RARASRSPEDCRRGKERPRTWHS*RSGGSG
Trigger: CCCACTTCCACCAGACCTTCATGAATGCCACGTGCG...AGGCCTCTCTTTTCCCCGCCTGCAGTCTTCTGGGCTGCGGGAGGCCCTGGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp AGCTCTGCACGGGGCAAGGAGTGCATGGTGGGGGCTGACCGCTCATTTGGCTCCGCAGGACGTGGCCGATaGTCATGGTGGTGCCTCCGA +
Preference number: 4 (lower is better)
Translates to: SSARGKECMVGADRSFGSAGRGR*SWWCLR
Trigger: TCGGAGGCACCACCATGATCATCGGCCACGTCCTGC...GGAGCCAAATGAGCGGTCAGCCCCCACCATGCACTCCTTGCCCCGTGCAGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp AGGGCCAGGGCCTCCCGCAGCCCAGAAGACTGCAGGCGGGGAAAAGAGAGGCCTTGGCCAGCAGGCTCATaGGGTAGGTTGAGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: RARASRSPEDCRRGKERPWPAGS*GRLRCW
Trigger: CCAACACCTCAACCTACCTCATGAGCCTGCTGGCCA...AGGCCTCTCTTTTCCCCGCCTGCAGTCTTCTGGGCTGCGGGAGGCCCTGGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp CCTGGTGCCGACCACGGGAGATCACGGCACCTGAGCAGCAATGCGGGTTCGACAGGCAAGCATGTTCTATaGGCAAGGCCCGGCACGGCG +
Preference number: 4 (lower is better)
Translates to: PGADHGRSRHLSSNAGSTGKHVL*ARPGTA
Trigger: CGCCGTGCCGGGCCTTGCTCATAGAACATGCTTGCC...TGTCGAACCCGCATTGCTGCTCAGGTGCCGTGATCTCCCGTGGTCGGCACCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614712.4
CDS-3UTR GCA 90 bp AGGGCCAGGGCCTCCCGCAGCCCAGAAGACTGCAGGCGGGGAAAAGAGAGGCCTCGTCAGCCTCGTGGGTaGAGTCATCGTTCACCACCT +
Preference number: 4 (lower is better)
Translates to: RARASRSPEDCRRGKERPRQPRG*SHRSPP
Trigger: AGGTGGTGAACGATGACTGCACCCACGAGGCTGACG...AGGCCTCTCTTTTCCCCGCCTGCAGTCTTCTGGGCTGCGGGAGGCCCTGGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp TTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTACCCCCTCGGGTGGTGTaGCACCCAGCCCAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: FPGATGHTSLRRRHSEKVPPRVV*HPAQPL
Trigger: GAGAGGCTGGGCTGGGTGGCACACCACCCGAGGGGG...TACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp AGGGCCAGGGCCTCCCGCAGCCCAGAAGACTGCAGGCGGGGAAAAGAGAGGCCTAGAGATGGTGTGCACTaGACCAGGAGGCGGCGTCAT +
Preference number: 4 (lower is better)
Translates to: RARASRSPEDCRRGKERPRDGVH*TRRRRH
Trigger: ATGACGCCGCCTCCTGGTGCAGTGCACACCATCTCT...AGGCCTCTCTTTTCCCCGCCTGCAGTCTTCTGGGCTGCGGGAGGCCCTGGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp GTTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTTCCGACCCCAGGCTGTaGCTGCGCCTCAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: VPWCHGSHISQAEALREGSDPRL*LRLSSW
Trigger: CCAGCTGCTGAGGCGCAGGCACAGCCTGGGGTCGGA...ACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp AGGGCCAGGGCCTCCCGCAGCCCAGAAGACTGCAGGCGGGGAAAAGAGAGGCCTCCTGGACCTGCGTGCTaGCTGAGATGGTCTTTGTGG +
Preference number: 4 (lower is better)
Translates to: RARASRSPEDCRRGKERPPGPAC*LRWSLW
Trigger: CCACAAAGACCATCTCAGCCAGCACGCAGGTCCAGG...AGGCCTCTCTTTTCCCCGCCTGCAGTCTTCTGGGCTGCGGGAGGCCCTGGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp TTCCAATGGCTGCCACTTGCCATGAGCCCCTTCGCCACCTCTGCTCCCCGGCTGGCTGATGGTGACCAGTaGCACGCCGTGGCAGCGCAT +
Preference number: 4 (lower is better)
Translates to: FQWLPLAMSPFATSAPRLADGDQ*HAVAAH
Trigger: ATGCGCTGCCACGGCGTGCCACTGGTCACCATCAGC...CAGCCGGGGAGCAGAGGTGGCGAAGGGGCTCATGGCAAGTGGCAGCCATTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp GCTTTCCTAGCCCAAGCAAGGATGCTCTGCCCAGCTGGCCACCACCGCTGCTGCAGTGCTCTGGGCAACTaGCCAGTCAGCCAGGGGGCA +
Preference number: 4 (lower is better)
Translates to: AFLAQARMLCPAGHHRCCSALGN*PVSQGA
Trigger: TGCCCCCTGGCTGACTGGCCAGTTGCCCAGAGCACT...GCAGCAGCGGTGGTGGCCAGCTGGGCAGAGCATCCTTGCTTGGGCTAGGAAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp CCTGGTGCCGACCACGGGAGATCACGGCACCTGAGCAGCAATGCGGGTTCGACAGATGAGGCCATGAGCTaGCAAGGGCCTGGTGCCGAC +
Preference number: 4 (lower is better)
Translates to: PGADHGRSRHLSSNAGSTDEAMS*QGPGAD
Trigger: GTCGGCACCAGGCCCTTGCCAGCTCATGGCCTCATC...TGTCGAACCCGCATTGCTGCTCAGGTGCCGTGATCTCCCGTGGTCGGCACCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp TTCCAATGGCTGCCACTTGCCATGAGCCCCTTCGCCACCTCTGCTCCCCGGCTGGATGAGGCCATGAGCTaGCAAGGGCCTGGTGCCGAC +
Preference number: 4 (lower is better)
Translates to: FQWLPLAMSPFATSAPRLDEAMS*QGPGAD
Trigger: GTCGGCACCAGGCCCTTGCCAGCTCATGGCCTCATC...CAGCCGGGGAGCAGAGGTGGCGAAGGGGCTCATGGCAAGTGGCAGCCATTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp TTCCAATGGCTGCCACTTGCCATGAGCCCCTTCGCCACCTCTGCTCCCCGGCTGAGCCTCCTCAGTAGCTaGGACTACAGGCGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: FQWLPLAMSPFATSAPRLSLLSS*DYRRPP
Trigger: TGGCGGGCGCCTGTAGTCCCAGCTACTGAGGAGGCT...CAGCCGGGGAGCAGAGGTGGCGAAGGGGCTCATGGCAAGTGGCAGCCATTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp AGCTCTGCACGGGGCAAGGAGTGCATGGTGGGGGCTGACCGCTCATTTGGCTCCCAGGAGGCGGCGTCATaGTTTCCCCCATCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: SSARGKECMVGADRSFGSQEAAS*FPPSLV
Trigger: CACCAGGGATGGGGGAAACCATGACGCCGCCTCCTG...GGAGCCAAATGAGCGGTCAGCCCCCACCATGCACTCCTTGCCCCGTGCAGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp AGGGCCAGGGCCTCCCGCAGCCCAGAAGACTGCAGGCGGGGAAAAGAGAGGCCTCAAGACGTGGTTCCCTaGTGCCACGGGTCACACATC +
Preference number: 4 (lower is better)
Translates to: RARASRSPEDCRRGKERPQDVVP*CHGSHI
Trigger: GATGTGTGACCCGTGGCACCAGGGAACCACGTCTTG...AGGCCTCTCTTTTCCCCGCCTGCAGTCTTCTGGGCTGCGGGAGGCCCTGGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp TTCCAATGGCTGCCACTTGCCATGAGCCCCTTCGCCACCTCTGCTCCCCGGCTGGGGGCAAGGAGTGCATaGTGGGGGCTGACCGCTCAT +
Preference number: 4 (lower is better)
Translates to: FQWLPLAMSPFATSAPRLGARSA*WGLTAH
Trigger: ATGAGCGGTCAGCCCCCACCATGCACTCCTTGCCCC...CAGCCGGGGAGCAGAGGTGGCGAAGGGGCTCATGGCAAGTGGCAGCCATTGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp GCTTTCCTAGCCCAAGCAAGGATGCTCTGCCCAGCTGGCCACCACCGCTGCTGCGGTGACGAAGCTGGCTaGAGCTCTGCACGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: AFLAQARMLCPAGHHRCCGDEAG*SSARGK
Trigger: CTTGCCCCGTGCAGAGCTCCAGCCAGCTTCGTCACC...GCAGCAGCGGTGGTGGCCAGCTGGGCAGAGCATCCTTGCTTGGGCTAGGAAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp CCTGGTGCCGACCACGGGAGATCACGGCACCTGAGCAGCAATGCGGGTTCGACAAGGACACCTGCTTCCTaGAGGGCTGGCATCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PGADHGRSRHLSSNAGSTRTPAS*RAGISG
Trigger: CCCAGAGATGCCAGCCCTTCAGGAAGCAGGTGTCCT...TGTCGAACCCGCATTGCTGCTCAGGTGCCGTGATCTCCCGTGGTCGGCACCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp AGCTCTGCACGGGGCAAGGAGTGCATGGTGGGGGCTGACCGCTCATTTGGCTCCGGAGATCACGGCACCTaGGCAGCAATGCGGGTTCGA +
Preference number: 4 (lower is better)
Translates to: SSARGKECMVGADRSFGSGDHGT*AAMRVR
Trigger: TCGAACCCGCATTGCTGCTCAGGTGCCGTGATCTCC...GGAGCCAAATGAGCGGTCAGCCCCCACCATGCACTCCTTGCCCCGTGCAGAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp AGCTCTGCACGGGGCAAGGAGTGCATGGTGGGGGCTGACCGCTCATTTGGCTCCGGACAGGGGAGAAGATaGGGCCATGAGCTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: SSARGKECMVGADRSFGSGQGRR*GHELAR
Trigger: CCTTGCCAGCTCATGGCCTCATCTTCTCCCCTGTCC...GGAGCCAAATGAGCGGTCAGCCCCCACCATGCACTCCTTGCCCCGTGCAGAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp CCTGGTGCCGACCACGGGAGATCACGGCACCTGAGCAGCAATGCGGGTTCGACAGATCTCCTGACTCCATaGTCCACCCGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: PGADHGRSRHLSSNAGSTDLLTP*STRLGL
Trigger: GAGGCCAAGGCGGGTGGATCATGGAGTCAGGAGATC...TGTCGAACCCGCATTGCTGCTCAGGTGCCGTGATCTCCCGTGGTCGGCACCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp TTCCAATGGCTGCCACTTGCCATGAGCCCCTTCGCCACCTCTGCTCCCCGGCTGAGGCCCATGACCCAGTaGGGGCTGACAGGGATAGAG +
Preference number: 4 (lower is better)
Translates to: FQWLPLAMSPFATSAPRLRPMTQ*GLTGIE
Trigger: CTCTATCCCTGTCAGCCCTCACTGGGTCATGGGCCT...CAGCCGGGGAGCAGAGGTGGCGAAGGGGCTCATGGCAAGTGGCAGCCATTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp TTCCAATGGCTGCCACTTGCCATGAGCCCCTTCGCCACCTCTGCTCCCCGGCTGTGTCAGCGTGGCATGTaGAGTGGTGGTCTCCGCCAG +
Preference number: 4 (lower is better)
Translates to: FQWLPLAMSPFATSAPRLCQRGM*SGGLRQ
Trigger: CTGGCGGAGACCACCACTGCACATGCCACGCTGACA...CAGCCGGGGAGCAGAGGTGGCGAAGGGGCTCATGGCAAGTGGCAGCCATTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp CCTGGTGCCGACCACGGGAGATCACGGCACCTGAGCAGCAATGCGGGTTCGACACCGGGTAGGAGTGTCTaGGAGTGGGGTTCCCATCTC +
Preference number: 4 (lower is better)
Translates to: PGADHGRSRHLSSNAGSTPGRSV*EWGSHL
Trigger: GAGATGGGAACCCCACTCGCAGACACTCCTACCCGG...TGTCGAACCCGCATTGCTGCTCAGGTGCCGTGATCTCCCGTGGTCGGCACCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp GCTTTCCTAGCCCAAGCAAGGATGCTCTGCCCAGCTGGCCACCACCGCTGCTGCCGCAGCCCAGAAGACTaGAGGCGGGGAAAAGAGAGG +
Preference number: 4 (lower is better)
Translates to: AFLAQARMLCPAGHHRCCRSPED*RRGKER
Trigger: CCTCTCTTTTCCCCGCCTGCAGTCTTCTGGGCTGCG...GCAGCAGCGGTGGTGGCCAGCTGGGCAGAGCATCCTTGCTTGGGCTAGGAAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp AGCTCTGCACGGGGCAAGGAGTGCATGGTGGGGGCTGACCGCTCATTTGGCTCCGCACCTGAGCAGCAATaGGGGTTCGACAGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: SSARGKECMVGADRSFGSAPEQQ*GFDSQV
Trigger: GACCTGGCTGTCGAACCCGCATTGCTGCTCAGGTGC...GGAGCCAAATGAGCGGTCAGCCCCCACCATGCACTCCTTGCCCCGTGCAGAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp GCTTTCCTAGCCCAAGCAAGGATGCTCTGCCCAGCTGGCCACCACCGCTGCTGCGTGATCTTGGCTCACTaGAAGCTCCGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: AFLAQARMLCPAGHHRCCVILAH*KLRLPG
Trigger: ACCCGGGAGGCGGAGCTTGCAGTGAGCCAAGATCAC...GCAGCAGCGGTGGTGGCCAGCTGGGCAGAGCATCCTTGCTTGGGCTAGGAAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp CCTGGTGCCGACCACGGGAGATCACGGCACCTGAGCAGCAATGCGGGTTCGACAGGACGCAGCTCACACTaGACGGTTAGCCCCCAATGG +
Preference number: 4 (lower is better)
Translates to: PGADHGRSRHLSSNAGSTGRSSH*TVSPQW
Trigger: CCATTGGGGGCTAACCGTGCAGTGTGAGCTGCGTCC...TGTCGAACCCGCATTGCTGCTCAGGTGCCGTGATCTCCCGTGGTCGGCACCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp TTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTACCCCTTCGCCACCTCTaGTCCCCGGCTGACCACCTC +
Preference number: 4 (lower is better)
Translates to: FPGATGHTSLRRRHSEKVPLRHL*SPADHL
Trigger: GAGGTGGTCAGCCGGGGAGCAGAGGTGGCGAAGGGG...TACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp AGCTCTGCACGGGGCAAGGAGTGCATGGTGGGGGCTGACCGCTCATTTGGCTCCGGGATAGAGATGGTGTaGACTGCACCAGGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: SSARGKECMVGADRSFGSGIEMV*TAPGGG
Trigger: GCCGCCTCCTGGTGCAGTGCACACCATCTCTATCCC...GGAGCCAAATGAGCGGTCAGCCCCCACCATGCACTCCTTGCCCCGTGCAGAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp AGCTCTGCACGGGGCAAGGAGTGCATGGTGGGGGCTGACCGCTCATTTGGCTCCAATCACAGCAGACCTTaGGGTCGGCCAGACCTCGGC +
Preference number: 4 (lower is better)
Translates to: SSARGKECMVGADRSFGSNHSRP*GRPDLG
Trigger: GCCGAGGTCTGGCCGACCCCAAGGTCTGCTGTGATT...GGAGCCAAATGAGCGGTCAGCCCCCACCATGCACTCCTTGCCCCGTGCAGAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp GCTTTCCTAGCCCAAGCAAGGATGCTCTGCCCAGCTGGCCACCACCGCTGCTGCGCGTGGCATGTGCAGTaGTGGTCTCCGCCAGCACAA +
Preference number: 4 (lower is better)
Translates to: AFLAQARMLCPAGHHRCCAWHVQ*WSPPAQ
Trigger: TTGTGCTGGCGGAGACCACCACTGCACATGCCACGC...GCAGCAGCGGTGGTGGCCAGCTGGGCAGAGCATCCTTGCTTGGGCTAGGAAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp GTTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTAGAGTTGCGGGCTGGTaGCGGCGGTGCGTCCTCACT +
Preference number: 4 (lower is better)
Translates to: VPWCHGSHISQAEALREGRVAGW*RRCVLT
Trigger: AGTGAGGACGCACCGCCGCCACCAGCCCGCAACTCT...ACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp TTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTATGGAGAGTTGCGGGCTaGTGGCGGCGGTGCGTCCTC +
Preference number: 4 (lower is better)
Translates to: FPGATGHTSLRRRHSEKVWRVAG*WRRCVL
Trigger: GAGGACGCACCGCCGCCACCAGCCCGCAACTCTCCA...TACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp GTTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTCCCTGCAGCTTCGGCTaGAGAGTTGCGGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: VPWCHGSHISQAEALREGPCSFG*RVAGWW
Trigger: CCACCAGCCCGCAACTCTCCAGCCGAAGCTGCAGGG...ACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp AGGGCCAGGGCCTCCCGCAGCCCAGAAGACTGCAGGCGGGGAAAAGAGAGGCCTGTGTGTGTGTGTGTGTaGTGGCAGGTGAAGACAGGG +
Preference number: 4 (lower is better)
Translates to: RARASRSPEDCRRGKERPVCVCV*WQVKTG
Trigger: CCCTGTCTTCACCTGCCACCACACACACACACACAC...AGGCCTCTCTTTTCCCCGCCTGCAGTCTTCTGGGCTGCGGGAGGCCCTGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp TTCCAATGGCTGCCACTTGCCATGAGCCCCTTCGCCACCTCTGCTCCCCGGCTGGAGGGCCCACCTGGATaGACAGGGGAGAAGATGAGG +
Preference number: 4 (lower is better)
Translates to: FQWLPLAMSPFATSAPRLEGPPG*TGEKMR
Trigger: CCTCATCTTCTCCCCTGTCCATCCAGGTGGGCCCTC...CAGCCGGGGAGCAGAGGTGGCGAAGGGGCTCATGGCAAGTGGCAGCCATTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp GCTTTCCTAGCCCAAGCAAGGATGCTCTGCCCAGCTGGCCACCACCGCTGCTGCGACCTGCGTGCTGGCTaGGATGGTCTTTGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: AFLAQARMLCPAGHHRCCDLRAG*DGLCGF
Trigger: GAAGCCACAAAGACCATCTCAGCCAGCACGCAGGTC...GCAGCAGCGGTGGTGGCCAGCTGGGCAGAGCATCCTTGCTTGGGCTAGGAAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp AGCTCTGCACGGGGCAAGGAGTGCATGGTGGGGGCTGACCGCTCATTTGGCTCCGACCTGCGTGCTGGCTaGGATGGTCTTTGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: SSARGKECMVGADRSFGSDLRAG*DGLCGF
Trigger: GAAGCCACAAAGACCATCTCAGCCAGCACGCAGGTC...GGAGCCAAATGAGCGGTCAGCCCCCACCATGCACTCCTTGCCCCGTGCAGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp AGCTCTGCACGGGGCAAGGAGTGCATGGTGGGGGCTGACCGCTCATTTGGCTCCTGCCCTCGGCGCACATaGAGACGCCGTTCTCATACA +
Preference number: 4 (lower is better)
Translates to: SSARGKECMVGADRSFGSCPRRT*RRRSHT
Trigger: TGTATGAGAACGGCGTCTTCATGTGCGCCGAGGGCA...GGAGCCAAATGAGCGGTCAGCCCCCACCATGCACTCCTTGCCCCGTGCAGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp CCTGGTGCCGACCACGGGAGATCACGGCACCTGAGCAGCAATGCGGGTTCGACACTGAAGCTGGATTCGTaGAGGTCCCTCATGCCCCCA +
Preference number: 4 (lower is better)
Translates to: PGADHGRSRHLSSNAGSTLKLDS*RSLMPP
Trigger: TGGGGGCATGAGGGACCTTCACGAATCCAGCTTCAG...TGTCGAACCCGCATTGCTGCTCAGGTGCCGTGATCTCCCGTGGTCGGCACCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp GCTTTCCTAGCCCAAGCAAGGATGCTCTGCCCAGCTGGCCACCACCGCTGCTGCATGGTCTCGATCTCCTaGCTCCATGATCCACCCGCC +
Preference number: 4 (lower is better)
Translates to: AFLAQARMLCPAGHHRCCMVSIS*LHDPPA
Trigger: GGCGGGTGGATCATGGAGTCAGGAGATCGAGACCAT...GCAGCAGCGGTGGTGGCCAGCTGGGCAGAGCATCCTTGCTTGGGCTAGGAAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp AGCTCTGCACGGGGCAAGGAGTGCATGGTGGGGGCTGACCGCTCATTTGGCTCCCGTCAGCCTCGTGGGTaGAGTCATCGTTCACCACCT +
Preference number: 4 (lower is better)
Translates to: SSARGKECMVGADRSFGSRQPRG*SHRSPP
Trigger: AGGTGGTGAACGATGACTGCACCCACGAGGCTGACG...GGAGCCAAATGAGCGGTCAGCCCCCACCATGCACTCCTTGCCCCGTGCAGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp GCTTTCCTAGCCCAAGCAAGGATGCTCTGCCCAGCTGGCCACCACCGCTGCTGCGGGTGCTGGTGTCGATaGCACCAGGGATCACCAGTT +
Preference number: 4 (lower is better)
Translates to: AFLAQARMLCPAGHHRCCGCWCR*HQGSPV
Trigger: AACTGGTGATCCCTGGTGGCATCGACACCAGCACCC...GCAGCAGCGGTGGTGGCCAGCTGGGCAGAGCATCCTTGCTTGGGCTAGGAAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp CCTGGTGCCGACCACGGGAGATCACGGCACCTGAGCAGCAATGCGGGTTCGACAATGGACGCGGGCGATTaGCCCAATGTCCTTGCAAGC +
Preference number: 4 (lower is better)
Translates to: PGADHGRSRHLSSNAGSTMDAGD*PNVLAS
Trigger: GCTTGCAAGGACATTGGGGCAATCGCCCGCGTCCAT...TGTCGAACCCGCATTGCTGCTCAGGTGCCGTGATCTCCCGTGGTCGGCACCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp ACTGGAGGTGGAAGGAGACACCCGGCCTCTAGTGTTTCCATGGGAACTTCTGTGCCCCCTCGGGTGGTGTaGCACCCAGCCCAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: TGGGRRHPASSVSMGTSVPPRVV*HPAQPL
Trigger: GAGAGGCTGGGCTGGGTGGCACACCACCCGAGGGGG...CACAGAAGTTCCCATGGAAACACTAGAGGCCGGGTGTCTCCTTCCACCTCCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp TTCCAATGGCTGCCACTTGCCATGAGCCCCTTCGCCACCTCTGCTCCCCGGCTGTGGCATGTGCAGTGGTaGTCTCCGCCAGCACAACCT +
Preference number: 4 (lower is better)
Translates to: FQWLPLAMSPFATSAPRLWHVQW*SPPAQP
Trigger: AGGTTGTGCTGGCGGAGACCACCACTGCACATGCCA...CAGCCGGGGAGCAGAGGTGGCGAAGGGGCTCATGGCAAGTGGCAGCCATTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp TTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTAAGAGTTGCGGGCTGGTaGCGGCGGTGCGTCCTCACT +
Preference number: 4 (lower is better)
Translates to: FPGATGHTSLRRRHSEKVRVAGW*RRCVLT
Trigger: AGTGAGGACGCACCGCCGCCACCAGCCCGCAACTCT...TACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp CCTGGTGCCGACCACGGGAGATCACGGCACCTGAGCAGCAATGCGGGTTCGACACGTCCTGGGCATGGCTaGGAAGCTGACATCTGTCTG +
Preference number: 4 (lower is better)
Translates to: PGADHGRSRHLSSNAGSTRPGHG*EADICL
Trigger: CAGACAGATGTCAGCTTCCCAGCCATGCCCAGGACG...TGTCGAACCCGCATTGCTGCTCAGGTGCCGTGATCTCCCGTGGTCGGCACCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp AGCTCTGCACGGGGCAAGGAGTGCATGGTGGGGGCTGACCGCTCATTTGGCTCCGGAGAAGTGAGGGTGTaGACGCAGCTCACACTGCAC +
Preference number: 4 (lower is better)
Translates to: SSARGKECMVGADRSFGSGEVRV*TQLTLH
Trigger: GTGCAGTGTGAGCTGCGTCCACACCCTCACTTCTCC...GGAGCCAAATGAGCGGTCAGCCCCCACCATGCACTCCTTGCCCCGTGCAGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp GTTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTCAGGAGGCGGCGTCATaGTTTCCCCCATCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: VPWCHGSHISQAEALREGQEAAS*FPPSLV
Trigger: CACCAGGGATGGGGGAAACCATGACGCCGCCTCCTG...ACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp CCTGGTGCCGACCACGGGAGATCACGGCACCTGAGCAGCAATGCGGGTTCGACAGGCCTATGTAGGGACTaGGGGTGGATGAAGCGCATG +
Preference number: 4 (lower is better)
Translates to: PGADHGRSRHLSSNAGSTGLCRD*GWMKRM
Trigger: CATGCGCTTCATCCACCCCCAGTCCCTACATAGGCC...TGTCGAACCCGCATTGCTGCTCAGGTGCCGTGATCTCCCGTGGTCGGCACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp CCTGGTGCCGACCACGGGAGATCACGGCACCTGAGCAGCAATGCGGGTTCGACAGCAAGGAGTGCATGGTaGGGGCTGACCGCTCATTTG +
Preference number: 4 (lower is better)
Translates to: PGADHGRSRHLSSNAGSTARSAW*GLTAHL
Trigger: CAAATGAGCGGTCAGCCCCCACCATGCACTCCTTGC...TGTCGAACCCGCATTGCTGCTCAGGTGCCGTGATCTCCCGTGGTCGGCACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp CCTGGTGCCGACCACGGGAGATCACGGCACCTGAGCAGCAATGCGGGTTCGACAGGCCCACCTGCTGGATaGTGCCATTCTCGATGTAGA +
Preference number: 4 (lower is better)
Translates to: PGADHGRSRHLSSNAGSTGPPAG*CHSRCR
Trigger: TCTACATCGAGAATGGCATCATCCAGCAGGTGGGCC...TGTCGAACCCGCATTGCTGCTCAGGTGCCGTGATCTCCCGTGGTCGGCACCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp ACAGAGACCTACTGTGGACTCCTAGCACTACACACACGCACGCACACGCACACATGGGTGCCCACCAGGTaGTCCCCACGTGGAGGGCGT +
Preference number: 4 (lower is better)
Translates to: TETYCGLLALHTRTHTHTWVPTR*SPRGGR
Trigger: ACGCCCTCCACGTGGGGATCACCTGGTGGGCACCCA...TGTGTGCGTGTGCGTGCGTGTGTGTAGTGCTAGGAGTCCACAGTAGGTCTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp AGCTCTGCACGGGGCAAGGAGTGCATGGTGGGGGCTGACCGCTCATTTGGCTCCGTGGTGAAAGGCCGGTaGTCTGATGCCACGATGTTC +
Preference number: 4 (lower is better)
Translates to: SSARGKECMVGADRSFGSVVKGR*SDATMF
Trigger: GAACATCGTGGCATCAGATCACCGGCCTTTCACCAC...GGAGCCAAATGAGCGGTCAGCCCCCACCATGCACTCCTTGCCCCGTGCAGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp AGCTCTGCACGGGGCAAGGAGTGCATGGTGGGGGCTGACCGCTCATTTGGCTCCAGCGAGGATCCGAGCTaGAGCTCGCTTTGGAACATG +
Preference number: 4 (lower is better)
Translates to: SSARGKECMVGADRSFGSSEDPS*SSLWNM
Trigger: CATGTTCCAAAGCGAGCTTCAGCTCGGATCCTCGCT...GGAGCCAAATGAGCGGTCAGCCCCCACCATGCACTCCTTGCCCCGTGCAGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp TTCCAATGGCTGCCACTTGCCATGAGCCCCTTCGCCACCTCTGCTCCCCGGCTGGCATGGCTGGGAAGCTaGCATCTGTCTGACTTGGGA +
Preference number: 4 (lower is better)
Translates to: FQWLPLAMSPFATSAPRLAWLGS*HLSDLG
Trigger: TCCCAAGTCAGACAGATGTCAGCTTCCCAGCCATGC...CAGCCGGGGAGCAGAGGTGGCGAAGGGGCTCATGGCAAGTGGCAGCCATTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp AGGGCCAGGGCCTCCCGCAGCCCAGAAGACTGCAGGCGGGGAAAAGAGAGGCCTTTAGCCCCCAATGGGTaGCTAGTCTTGGCTCAAACA +
Preference number: 4 (lower is better)
Translates to: RARASRSPEDCRRGKERPLAPNG*LVLAQT
Trigger: TGTTTGAGCCAAGACTAGTCACCCATTGGGGGCTAA...AGGCCTCTCTTTTCCCCGCCTGCAGTCTTCTGGGCTGCGGGAGGCCCTGGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp GTTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTGTGCATGGTGGGGGCTaGCCGCTCATTTGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: VPWCHGSHISQAEALREGVHGGG*PLIWLL
Trigger: AAGGAGCCAAATGAGCGGTCAGCCCCCACCATGCAC...ACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp AGGGCCAGGGCCTCCCGCAGCCCAGAAGACTGCAGGCGGGGAAAAGAGAGGCCTTTGCATCTTAGCAGCTaGGATAACGTCACCAGCCGA +
Preference number: 4 (lower is better)
Translates to: RARASRSPEDCRRGKERPLHLSS*DNVTSR
Trigger: TCGGCTGGTGACGTTATCGCAGCTGCTAAGATGCAA...AGGCCTCTCTTTTCCCCGCCTGCAGTCTTCTGGGCTGCGGGAGGCCCTGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp GAGATAGGACGTCCTGGGCATGGCTGGGAAGCTGACATCTGTCTGACTTGGGAATCCCTCATGCCCCCATaGCGGGTGACGGGCCGGGTA +
Preference number: 4 (lower is better)
Translates to: EIGRPGHGWEADICLTWESLMPP*RVTGRV
Trigger: TACCCGGCCCGTCACCCGGCATGGGGGCATGAGGGA...TTCCCAAGTCAGACAGATGTCAGCTTCCCAGCCATGCCCAGGACGTCCTATCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp GAGATAGGACGTCCTGGGCATGGCTGGGAAGCTGACATCTGTCTGACTTGGGAACCCCTTCGCCACCTCTaGTCCCCGGCTGACCACCTC +
Preference number: 4 (lower is better)
Translates to: EIGRPGHGWEADICLTWEPLRHL*SPADHL
Trigger: GAGGTGGTCAGCCGGGGAGCAGAGGTGGCGAAGGGG...TTCCCAAGTCAGACAGATGTCAGCTTCCCAGCCATGCCCAGGACGTCCTATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp GTTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTCCAATGGCTGCCACTTaGCATGAGCCCCTTCGCCAC +
Preference number: 4 (lower is better)
Translates to: VPWCHGSHISQAEALREGPMAAT*HEPLRH
Trigger: GTGGCGAAGGGGCTCATGGCAAGTGGCAGCCATTGG...ACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp AGGGCCAGGGCCTCCCGCAGCCCAGAAGACTGCAGGCGGGGAAAAGAGAGGCCTTCACCAGTTTTCCTGTaGCATCAATCACCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: RARASRSPEDCRRGKERPSPVFL*HQSPWP
Trigger: GGGCCAAGGTGATTGATGCCACAGGAAAACTGGTGA...AGGCCTCTCTTTTCCCCGCCTGCAGTCTTCTGGGCTGCGGGAGGCCCTGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp AGCTCTGCACGGGGCAAGGAGTGCATGGTGGGGGCTGACCGCTCATTTGGCTCCAGCTTCCAGCTCCTCTaGACGGCTGATCTCGATTCC +
Preference number: 4 (lower is better)
Translates to: SSARGKECMVGADRSFGSSFQLL*TADLDS
Trigger: GGAATCGAGATCAGCCGTCCAGAGGAGCTGGAAGCT...GGAGCCAAATGAGCGGTCAGCCCCCACCATGCACTCCTTGCCCCGTGCAGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp TTCCAATGGCTGCCACTTGCCATGAGCCCCTTCGCCACCTCTGCTCCCCGGCTGGGTAGGTTGAGGTGTTaGTGTCCAGTCTCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: FQWLPLAMSPFATSAPRLGRLRC*CPVSGE
Trigger: CTCCCCTGAGACTGGACACCAACACCTCAACCTACC...CAGCCGGGGAGCAGAGGTGGCGAAGGGGCTCATGGCAAGTGGCAGCCATTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp ACAGAGACCTACTGTGGACTCCTAGCACTACACACACGCACGCACACGCACACATGGAGAGTTGCGGGCTaGTGGCGGCGGTGCGTCCTC +
Preference number: 4 (lower is better)
Translates to: TETYCGLLALHTRTHTHTWRVAG*WRRCVL
Trigger: GAGGACGCACCGCCGCCACCAGCCCGCAACTCTCCA...TGTGTGCGTGTGCGTGCGTGTGTGTAGTGCTAGGAGTCCACAGTAGGTCTCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp GCTTTCCTAGCCCAAGCAAGGATGCTCTGCCCAGCTGGCCACCACCGCTGCTGCCAGGGCACTAAAGTCTaGGCTTTCCCAAAGCCAGCG +
Preference number: 4 (lower is better)
Translates to: AFLAQARMLCPAGHHRCCQGTKV*AFPKPA
Trigger: CGCTGGCTTTGGGAAAGCCCAGACTTTAGTGCCCTG...GCAGCAGCGGTGGTGGCCAGCTGGGCAGAGCATCCTTGCTTGGGCTAGGAAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp CCTGGTGCCGACCACGGGAGATCACGGCACCTGAGCAGCAATGCGGGTTCGACATCTGCTAAAGTGCTCTaGGCAACTGGCCAGTCAGCC +
Preference number: 4 (lower is better)
Translates to: PGADHGRSRHLSSNAGSTSAKVL*ATGQSA
Trigger: GGCTGACTGGCCAGTTGCCCAGAGCACTTTAGCAGA...TGTCGAACCCGCATTGCTGCTCAGGTGCCGTGATCTCCCGTGGTCGGCACCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp ACAGAGACCTACTGTGGACTCCTAGCACTACACACACGCACGCACACGCACACAGGGCGCAGGAGAAGCTaGCGAGGGGCACCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: TETYCGLLALHTRTHTHTGRRRS*RGAPGV
Trigger: GACTCCTGGTGCCCCTCGCCAGCTTCTCCTGCGCCC...TGTGTGCGTGTGCGTGCGTGTGTGTAGTGCTAGGAGTCCACAGTAGGTCTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp AGGGCCAGGGCCTCCCGCAGCCCAGAAGACTGCAGGCGGGGAAAAGAGAGGCCTCCCCCTTTTGGAATGTaGGAAACTAGACAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: RARASRSPEDCRRGKERPPPFGM*ETRQGG
Trigger: CCCTCCTTGTCTAGTTTCCCACATTCCAAAAGGGGG...AGGCCTCTCTTTTCCCCGCCTGCAGTCTTCTGGGCTGCGGGAGGCCCTGGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp TTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTAAGTGGGGAAGTCACCTaGGTGCTGGGGTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: FPGATGHTSLRRRHSEKVSGEVT*VLGCWR
Trigger: CCTCCAGCACCCCAGCACCCAGGTGACTTCCCCACT...TACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp GCGCAAACCAAACGTGCAAAACAAAACCATTTACACGCGCCTGGCACCAGCCTCTGGGTGCCCACCAGGTaGTCCCCACGTGGAGGGCGT +
Preference number: 4 (lower is better)
Translates to: AQTKRAKQNHLHAPGTSLWVPTR*SPRGGR
Trigger: ACGCCCTCCACGTGGGGATCACCTGGTGGGCACCCA...GAGGCTGGTGCCAGGCGCGTGTAAATGGTTTTGTTTTGCACGTTTGGTTTGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp TTCCAATGGCTGCCACTTGCCATGAGCCCCTTCGCCACCTCTGCTCCCCGGCTGACATCTGGAACGAGTTaGCACCCTTCTCCCTCACCA +
Preference number: 4 (lower is better)
Translates to: FQWLPLAMSPFATSAPRLTSGTS*HPSPSP
Trigger: TGGTGAGGGAGAAGGGTGTCAACTCGTTCCAGATGT...CAGCCGGGGAGCAGAGGTGGCGAAGGGGCTCATGGCAAGTGGCAGCCATTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp GCTTTCCTAGCCCAAGCAAGGATGCTCTGCCCAGCTGGCCACCACCGCTGCTGCACATGGTCATCGATCTaGGAGCCAGAGAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: AFLAQARMLCPAGHHRCCTWSSI*EPERLK
Trigger: CTTCAGCCTCTCTGGCTCTCAGATCGATGACCATGT...GCAGCAGCGGTGGTGGCCAGCTGGGCAGAGCATCCTTGCTTGGGCTAGGAAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp TTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTAGGACAGGGGAGAAGATaGGGCCATGAGCTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: FPGATGHTSLRRRHSEKVGQGRR*GHELAR
Trigger: CCTTGCCAGCTCATGGCCTCATCTTCTCCCCTGTCC...TACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp CCTGGTGCCGACCACGGGAGATCACGGCACCTGAGCAGCAATGCGGGTTCGACAATCACATGTGCAACATaGAGTCACTTCCCACGGGGC +
Preference number: 4 (lower is better)
Translates to: PGADHGRSRHLSSNAGSTITCAT*SHFPRG
Trigger: GCCCCGTGGGAAGTGACTTCATGTTGCACATGTGAT...TGTCGAACCCGCATTGCTGCTCAGGTGCCGTGATCTCCCGTGGTCGGCACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp ACTGGAGGTGGAAGGAGACACCCGGCCTCTAGTGTTTCCATGGGAACTTCTGTGCACCCGGCCAGGGGCTaGCCTTTAACCGAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: TGGGRRHPASSVSMGTSVHPARG*PLTEGP
Trigger: TGGACCCTCGGTTAAAGGTCAGCCCCTGGCCGGGTG...CACAGAAGTTCCCATGGAAACACTAGAGGCCGGGTGTCTCCTTCCACCTCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp AGAGCTGCATTCAGTGCAACCAGAGACCCTTTCGTTCCAACCAGGAGCCAGTGGGGCTGCCACTTGCCATaGGCCCCTTCGCCACCTCTG +
Preference number: 4 (lower is better)
Translates to: RAAFSATRDPFVPTRSQWGCHLP*APSPPL
Trigger: CAGAGGTGGCGAAGGGGCTCATGGCAAGTGGCAGCC...CCACTGGCTCCTGGTTGGAACGAAAGGGTCTCTGGTTGCACTGAATGCAGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp AGCTCTGCACGGGGCAAGGAGTGCATGGTGGGGGCTGACCGCTCATTTGGCTCCATCACGACATCGGCTTaGCAGAGACCTACTGTGGAC +
Preference number: 4 (lower is better)
Translates to: SSARGKECMVGADRSFGSITTSA*QRPTVD
Trigger: GTCCACAGTAGGTCTCTGTCAAGCCGATGTCGTGAT...GGAGCCAAATGAGCGGTCAGCCCCCACCATGCACTCCTTGCCCCGTGCAGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp TTCCAATGGCTGCCACTTGCCATGAGCCCCTTCGCCACCTCTGCTCCCCGGCTGGATCCTCACGCTGGCTaGGTTGGCAAGCATGTTCTA +
Preference number: 4 (lower is better)
Translates to: FQWLPLAMSPFATSAPRLDPHAG*VGKHVL
Trigger: TAGAACATGCTTGCCAACTCAGCCAGCGTGAGGATC...CAGCCGGGGAGCAGAGGTGGCGAAGGGGCTCATGGCAAGTGGCAGCCATTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614712.4
CDS-3UTR GCA 90 bp TTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTACCGGGTAGGAGTGTCTaGGAGTGGGGTTCCCATCTC +
Preference number: 4 (lower is better)
Translates to: FPGATGHTSLRRRHSEKVPGRSV*EWGSHL
Trigger: GAGATGGGAACCCCACTCGCAGACACTCCTACCCGG...TACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp CCTGGTGCCGACCACGGGAGATCACGGCACCTGAGCAGCAATGCGGGTTCGACAAATGCCTTTACCAAATaGCACTCGACCTGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: PGADHGRSRHLSSNAGSTNAFTK*HSTCLR
Trigger: CCGGAGGCAGGTCGAGTGGCATTTGGTAAAGGCATT...TGTCGAACCCGCATTGCTGCTCAGGTGCCGTGATCTCCCGTGGTCGGCACCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp TTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTAAGCCTCTCCTGCCCCTaGAGCTTCGGCTGGAGAGTT +
Preference number: 4 (lower is better)
Translates to: FPGATGHTSLRRRHSEKVSLSCP*SFGWRV
Trigger: AACTCTCCAGCCGAAGCTGCAGGGGCAGGAGAGGCT...TACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp ACAGAGACCTACTGTGGACTCCTAGCACTACACACACGCACGCACACGCACACAAGCCACCCCCATCCCTaGCCCTACACAGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: TETYCGLLALHTRTHTHTSHPHP*PYTGPE
Trigger: CTCTGGCCCTGTGTAGGGGCAGGGATGGGGGTGGCT...TGTGTGCGTGTGCGTGCGTGTGTGTAGTGCTAGGAGTCCACAGTAGGTCTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp AGGGCCAGGGCCTCCCGCAGCCCAGAAGACTGCAGGCGGGGAAAAGAGAGGCCTGACCAGTTTGAGAGCTaGATTCAGTGCAACCAGAGA +
Preference number: 4 (lower is better)
Translates to: RARASRSPEDCRRGKERPDQFES*IQCNQR
Trigger: TCTCTGGTTGCACTGAATGCAGCTCTCAAACTGGTC...AGGCCTCTCTTTTCCCCGCCTGCAGTCTTCTGGGCTGCGGGAGGCCCTGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp GAAGCCTCGCGCAAGCCTCGGGGGCTGAAATCACATGTGCAACATGAAGTCACTACCTGGGTGCTGGGGTaGTGGAGGCTCCATCCGACC +
Preference number: 4 (lower is better)
Translates to: EASRKPRGLKSHVQHEVTTWVLG*WRLHPT
Trigger: GGTCGGATGGAGCCTCCAGCACCCCAGCACCCAGGT...AGTGACTTCATGTTGCACATGTGATTTCAGCCCCCGAGGCTTGCGCGAGGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp ACAGAGACCTACTGTGGACTCCTAGCACTACACACACGCACGCACACGCACACAACCTGGGTGCTGGGGTaGTGGAGGCTCCATCCGACC +
Preference number: 4 (lower is better)
Translates to: TETYCGLLALHTRTHTHTTWVLG*WRLHPT
Trigger: GGTCGGATGGAGCCTCCAGCACCCCAGCACCCAGGT...TGTGTGCGTGTGCGTGCGTGTGTGTAGTGCTAGGAGTCCACAGTAGGTCTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp AGAGCTGCATTCAGTGCAACCAGAGACCCTTTCGTTCCAACCAGGAGCCAGTGGCCCTGCAGCTTCGGCTaGAGAGTTGCGGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: RAAFSATRDPFVPTRSQWPCSFG*RVAGWW
Trigger: CCACCAGCCCGCAACTCTCCAGCCGAAGCTGCAGGG...CCACTGGCTCCTGGTTGGAACGAAAGGGTCTCTGGTTGCACTGAATGCAGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp CCTGGTGCCGACCACGGGAGATCACGGCACCTGAGCAGCAATGCGGGTTCGACAGACATCTGTCTGACTTaGGAAATGTCACCACGGGGC +
Preference number: 4 (lower is better)
Translates to: PGADHGRSRHLSSNAGSTDICLT*EMSPRG
Trigger: GCCCCGTGGTGACATTTCCCAAGTCAGACAGATGTC...TGTCGAACCCGCATTGCTGCTCAGGTGCCGTGATCTCCCGTGGTCGGCACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp AGCTCTGCACGGGGCAAGGAGTGCATGGTGGGGGCTGACCGCTCATTTGGCTCCCCATGGGAACTTCTGTaGGGCTTTAGAAGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SSARGKECMVGADRSFGSPWELL*GFRSRE
Trigger: CTCCCTGCTTCTAAAGCCCCACAGAAGTTCCCATGG...GGAGCCAAATGAGCGGTCAGCCCCCACCATGCACTCCTTGCCCCGTGCAGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp GCTTTCCTAGCCCAAGCAAGGATGCTCTGCCCAGCTGGCCACCACCGCTGCTGCACGGTTAGCCCCCAATaGGTGACTAGTCTTGGCTCA +
Preference number: 4 (lower is better)
Translates to: AFLAQARMLCPAGHHRCCTVSPQ*VTSLGS
Trigger: TGAGCCAAGACTAGTCACCCATTGGGGGCTAACCGT...GCAGCAGCGGTGGTGGCCAGCTGGGCAGAGCATCCTTGCTTGGGCTAGGAAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp AGGGCCAGGGCCTCCCGCAGCCCAGAAGACTGCAGGCGGGGAAAAGAGAGGCCTTTCCTTGTGGTTCTGTaGCTTCTGGGTCAGTATCAG +
Preference number: 4 (lower is better)
Translates to: RARASRSPEDCRRGKERPFLVVL*LLGQYQ
Trigger: CTGATACTGACCCAGAAGCCACAGAACCACAAGGAA...AGGCCTCTCTTTTCCCCGCCTGCAGTCTTCTGGGCTGCGGGAGGCCCTGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp GCTTTCCTAGCCCAAGCAAGGATGCTCTGCCCAGCTGGCCACCACCGCTGCTGCCAGCTGGAGGGGGTTTaGGTTTCCTTGTGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: AFLAQARMLCPAGHHRCCQLEGV*VSLWFC
Trigger: ACAGAACCACAAGGAAACCCAAACCCCCTCCAGCTG...GCAGCAGCGGTGGTGGCCAGCTGGGCAGAGCATCCTTGCTTGGGCTAGGAAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp AGAGCTGCATTCAGTGCAACCAGAGACCCTTTCGTTCCAACCAGGAGCCAGTGGTGGGTGCTGGGGTGCTaGAGGCTCCATCCGACCCCA +
Preference number: 4 (lower is better)
Translates to: RAAFSATRDPFVPTRSQWWVLGC*RLHPTP
Trigger: TGGGGTCGGATGGAGCCTCCAGCACCCCAGCACCCA...CCACTGGCTCCTGGTTGGAACGAAAGGGTCTCTGGTTGCACTGAATGCAGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp ACTGGAGGTGGAAGGAGACACCCGGCCTCTAGTGTTTCCATGGGAACTTCTGTGTGGGTGCTGGGGTGCTaGAGGCTCCATCCGACCCCA +
Preference number: 4 (lower is better)
Translates to: TGGGRRHPASSVSMGTSVWVLGC*RLHPTP
Trigger: TGGGGTCGGATGGAGCCTCCAGCACCCCAGCACCCA...CACAGAAGTTCCCATGGAAACACTAGAGGCCGGGTGTCTCCTTCCACCTCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp TTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTAAAGTCACCTGGGTGCTaGGGTGCTGGAGGCTCCATC +
Preference number: 4 (lower is better)
Translates to: FPGATGHTSLRRRHSEKVKSPGC*GAGGSI
Trigger: GATGGAGCCTCCAGCACCCCAGCACCCAGGTGACTT...TACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp GTTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTGGCCCACCTGCTGGATaGTGCCATTCTCGATGTAGA +
Preference number: 4 (lower is better)
Translates to: VPWCHGSHISQAEALREGGPPAG*CHSRCR
Trigger: TCTACATCGAGAATGGCATCATCCAGCAGGTGGGCC...ACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp GAAGCCTCGCGCAAGCCTCGGGGGCTGAAATCACATGTGCAACATGAAGTCACTGCAGGACGTGGCCGATaGTCATGGTGGTGCCTCCGA +
Preference number: 4 (lower is better)
Translates to: EASRKPRGLKSHVQHEVTAGRGR*SWWCLR
Trigger: TCGGAGGCACCACCATGATCATCGGCCACGTCCTGC...AGTGACTTCATGTTGCACATGTGATTTCAGCCCCCGAGGCTTGCGCGAGGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp AGCTCTGCACGGGGCAAGGAGTGCATGGTGGGGGCTGACCGCTCATTTGGCTCCCTTTCTGCTTTGTGGTaGAAGGCCGGTGATCTGATG +
Preference number: 4 (lower is better)
Translates to: SSARGKECMVGADRSFGSLSALW*KAGDLM
Trigger: CATCAGATCACCGGCCTTTCACCACAAAGCAGAAAG...GGAGCCAAATGAGCGGTCAGCCCCCACCATGCACTCCTTGCCCCGTGCAGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp CCTGGTGCCGACCACGGGAGATCACGGCACCTGAGCAGCAATGCGGGTTCGACACTTTCTGCTTTGTGGTaGAAGGCCGGTGATCTGATG +
Preference number: 4 (lower is better)
Translates to: PGADHGRSRHLSSNAGSTLSALW*KAGDLM
Trigger: CATCAGATCACCGGCCTTTCACCACAAAGCAGAAAG...TGTCGAACCCGCATTGCTGCTCAGGTGCCGTGATCTCCCGTGGTCGGCACCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp CCTGGTGCCGACCACGGGAGATCACGGCACCTGAGCAGCAATGCGGGTTCGACATGGGGTCAGAGGACCTaGACTTTCTGGGTCTTAGTT +
Preference number: 4 (lower is better)
Translates to: PGADHGRSRHLSSNAGSTWGQRT*TFWVLV
Trigger: AACTAAGACCCAGAAAGTTCAGGTCCTCTGACCCCA...TGTCGAACCCGCATTGCTGCTCAGGTGCCGTGATCTCCCGTGGTCGGCACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp GCGCAAACCAAACGTGCAAAACAAAACCATTTACACGCGCCTGGCACCAGCCTCGGCTGCCACTTGCCATaGGCCCCTTCGCCACCTCTG +
Preference number: 4 (lower is better)
Translates to: AQTKRAKQNHLHAPGTSLGCHLP*APSPPL
Trigger: CAGAGGTGGCGAAGGGGCTCATGGCAAGTGGCAGCC...GAGGCTGGTGCCAGGCGCGTGTAAATGGTTTTGTTTTGCACGTTTGGTTTGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp ACAGAGACCTACTGTGGACTCCTAGCACTACACACACGCACGCACACGCACACAGGGACTGGGGGTGGATaGAGCGCATGGCCTACAGTG +
Preference number: 4 (lower is better)
Translates to: TETYCGLLALHTRTHTHTGTGGG*SAWPTV
Trigger: CACTGTAGGCCATGCGCTTCATCCACCCCCAGTCCC...TGTGTGCGTGTGCGTGCGTGTGTGTAGTGCTAGGAGTCCACAGTAGGTCTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp GAGATAGGACGTCCTGGGCATGGCTGGGAAGCTGACATCTGTCTGACTTGGGAAGGGACTGGGGGTGGATaGAGCGCATGGCCTACAGTG +
Preference number: 4 (lower is better)
Translates to: EIGRPGHGWEADICLTWEGTGGG*SAWPTV
Trigger: CACTGTAGGCCATGCGCTTCATCCACCCCCAGTCCC...TTCCCAAGTCAGACAGATGTCAGCTTCCCAGCCATGCCCAGGACGTCCTATCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp TTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTATCTGGTGGAAGTGGGTaGTGGTGTCGATGCCACCAG +
Preference number: 4 (lower is better)
Translates to: FPGATGHTSLRRRHSEKVSGGSG*WCRCHQ
Trigger: CTGGTGGCATCGACACCAGCACCCACTTCCACCAGA...TACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp GCTTTCCTAGCCCAAGCAAGGATGCTCTGCCCAGCTGGCCACCACCGCTGCTGCCAGTGTCTCCATTTCTaGTTTCACCTTGGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: AFLAQARMLCPAGHHRCCQCLHF*FHLGCP
Trigger: TGGGCACCCAAGGTGAAAGCAGAAATGGAGACACTG...GCAGCAGCGGTGGTGGCCAGCTGGGCAGAGCATCCTTGCTTGGGCTAGGAAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp AGCTCTGCACGGGGCAAGGAGTGCATGGTGGGGGCTGACCGCTCATTTGGCTCCCAGTGTCTCCATTTCTaGTTTCACCTTGGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: SSARGKECMVGADRSFGSQCLHF*FHLGCP
Trigger: TGGGCACCCAAGGTGAAAGCAGAAATGGAGACACTG...GGAGCCAAATGAGCGGTCAGCCCCCACCATGCACTCCTTGCCCCGTGCAGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp GCTTTCCTAGCCCAAGCAAGGATGCTCTGCCCAGCTGGCCACCACCGCTGCTGCTTGCATCTTAGCAGCTaGGATAACGTCACCAGCCGA +
Preference number: 4 (lower is better)
Translates to: AFLAQARMLCPAGHHRCCLHLSS*DNVTSR
Trigger: TCGGCTGGTGACGTTATCGCAGCTGCTAAGATGCAA...GCAGCAGCGGTGGTGGCCAGCTGGGCAGAGCATCCTTGCTTGGGCTAGGAAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp CGGGGGCTGAAATCACATGTGCAACATGAAGTCACTTCCCACGGGGCAGACCAGTGTCAGCGTGGCATGTaGAGTGGTGGTCTCCGCCAG +
Preference number: 4 (lower is better)
Translates to: RGLKSHVQHEVTSHGADQCQRGM*SGGLRQ
Trigger: CTGGCGGAGACCACCACTGCACATGCCACGCTGACA...CTGGTCTGCCCCGTGGGAAGTGACTTCATGTTGCACATGTGATTTCAGCCCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp AGCTCTGCACGGGGCAAGGAGTGCATGGTGGGGGCTGACCGCTCATTTGGCTCCTTGCCCATAGCTTTCTaGTTTGTGGTGAAAGGCCGG +
Preference number: 4 (lower is better)
Translates to: SSARGKECMVGADRSFGSLPIAF*FVVKGR
Trigger: CCGGCCTTTCACCACAAAGCAGAAAGCTATGGGCAA...GGAGCCAAATGAGCGGTCAGCCCCCACCATGCACTCCTTGCCCCGTGCAGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp TTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTAACGCTCATGCGGTCCTaGACGCCACTCACTCCATGT +
Preference number: 4 (lower is better)
Translates to: FPGATGHTSLRRRHSEKVTLMRS*TPLTPC
Trigger: ACATGGAGTGAGTGGCGTGCAGGACCGCATGAGCGT...TACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp AGCTCTGCACGGGGCAAGGAGTGCATGGTGGGGGCTGACCGCTCATTTGGCTCCGTTCAGAAGCTTAGCTaGGTTGGAACTGGTAACGGC +
Preference number: 4 (lower is better)
Translates to: SSARGKECMVGADRSFGSVQKLS*VGTGNG
Trigger: GCCGTTACCAGTTCCAACGCAGCTAAGCTTCTGAAC...GGAGCCAAATGAGCGGTCAGCCCCCACCATGCACTCCTTGCCCCGTGCAGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp ACTGGAGGTGGAAGGAGACACCCGGCCTCTAGTGTTTCCATGGGAACTTCTGTGTCAGGGGACAGAACTTaGCGGTGCCCTCGGCGCACA +
Preference number: 4 (lower is better)
Translates to: TGGGRRHPASSVSMGTSVSGDRT*RCPRRT
Trigger: TGTGCGCCGAGGGCACCGGCAAGTTCTGTCCCCTGA...CACAGAAGTTCCCATGGAAACACTAGAGGCCGGGTGTCTCCTTCCACCTCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp ACAGAGACCTACTGTGGACTCCTAGCACTACACACACGCACGCACACGCACACATCAGGGGACAGAACTTaGCGGTGCCCTCGGCGCACA +
Preference number: 4 (lower is better)
Translates to: TETYCGLLALHTRTHTHTSGDRT*RCPRRT
Trigger: TGTGCGCCGAGGGCACCGGCAAGTTCTGTCCCCTGA...TGTGTGCGTGTGCGTGCGTGTGTGTAGTGCTAGGAGTCCACAGTAGGTCTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp GCGCAAACCAAACGTGCAAAACAAAACCATTTACACGCGCCTGGCACCAGCCTCCTGGCAAGGGCCTGGTaGCGACCACGGGAGATCACG +
Preference number: 4 (lower is better)
Translates to: AQTKRAKQNHLHAPGTSLLARAW*RPREIT
Trigger: CGTGATCTCCCGTGGTCGGCACCAGGCCCTTGCCAG...GAGGCTGGTGCCAGGCGCGTGTAAATGGTTTTGTTTTGCACGTTTGGTTTGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp CGGGGGCTGAAATCACATGTGCAACATGAAGTCACTTCCCACGGGGCAGACCAGAGCTGGCTGGAGCTCTaGACGGGGCAAGGAGTGCAT +
Preference number: 4 (lower is better)
Translates to: RGLKSHVQHEVTSHGADQSWLEL*TGQGVH
Trigger: ATGCACTCCTTGCCCCGTGCAGAGCTCCAGCCAGCT...CTGGTCTGCCCCGTGGGAAGTGACTTCATGTTGCACATGTGATTTCAGCCCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp GAGATAGGACGTCCTGGGCATGGCTGGGAAGCTGACATCTGTCTGACTTGGGAAGCTGATGGTGACCAGTaGCACGCCGTGGCAGCGCAT +
Preference number: 4 (lower is better)
Translates to: EIGRPGHGWEADICLTWEADGDQ*HAVAAH
Trigger: ATGCGCTGCCACGGCGTGCCACTGGTCACCATCAGC...TTCCCAAGTCAGACAGATGTCAGCTTCCCAGCCATGCCCAGGACGTCCTATCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp TTCCAATGGCTGCCACTTGCCATGAGCCCCTTCGCCACCTCTGCTCCCCGGCTGCCCCCTTTTGGAATGTaGGAAACTAGACAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: FQWLPLAMSPFATSAPRLPPFGM*ETRQGG
Trigger: CCCTCCTTGTCTAGTTTCCCACATTCCAAAAGGGGG...CAGCCGGGGAGCAGAGGTGGCGAAGGGGCTCATGGCAAGTGGCAGCCATTGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp CGGGGGCTGAAATCACATGTGCAACATGAAGTCACTTCCCACGGGGCAGACCAGGAGGGCCCACCTGGATaGACAGGGGAGAAGATGAGG +
Preference number: 4 (lower is better)
Translates to: RGLKSHVQHEVTSHGADQEGPPG*TGEKMR
Trigger: CCTCATCTTCTCCCCTGTCCATCCAGGTGGGCCCTC...CTGGTCTGCCCCGTGGGAAGTGACTTCATGTTGCACATGTGATTTCAGCCCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp CGGGGGCTGAAATCACATGTGCAACATGAAGTCACTTCCCACGGGGCAGACCAGCAGGGAGGGCCCACCTaGATGGACAGGGGAGAAGAT +
Preference number: 4 (lower is better)
Translates to: RGLKSHVQHEVTSHGADQQGGPT*MDRGED
Trigger: ATCTTCTCCCCTGTCCATCCAGGTGGGCCCTCCCTG...CTGGTCTGCCCCGTGGGAAGTGACTTCATGTTGCACATGTGATTTCAGCCCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp CGGGGGCTGAAATCACATGTGCAACATGAAGTCACTTCCCACGGGGCAGACCAGGACCACTCCAAGACGTaGTTCCCTGGTGCCACGGGT +
Preference number: 4 (lower is better)
Translates to: RGLKSHVQHEVTSHGADQDHSKT*FPGATG
Trigger: ACCCGTGGCACCAGGGAACCACGTCTTGGAGTGGTC...CTGGTCTGCCCCGTGGGAAGTGACTTCATGTTGCACATGTGATTTCAGCCCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp TTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTAGCGCATGGCCTACAGTaGACCACTCCAAGACGTGGT +
Preference number: 4 (lower is better)
Translates to: FPGATGHTSLRRRHSEKVAHGLQ*TTPRRG
Trigger: ACCACGTCTTGGAGTGGTCCACTGTAGGCCATGCGC...TACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp GAAGCCTCGCGCAAGCCTCGGGGGCTGAAATCACATGTGCAACATGAAGTCACTGCTCCTCTGGACGGCTaGTCTCGATTCCTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: EASRKPRGLKSHVQHEVTAPLDG*SRFLLG
Trigger: GCCCAGAAGGAATCGAGATCAGCCGTCCAGAGGAGC...AGTGACTTCATGTTGCACATGTGATTTCAGCCCCCGAGGCTTGCGCGAGGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp AGAGCTGCATTCAGTGCAACCAGAGACCCTTTCGTTCCAACCAGGAGCCAGTGGGCTCCTCTGGACGGCTaGTCTCGATTCCTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: RAAFSATRDPFVPTRSQWAPLDG*SRFLLG
Trigger: GCCCAGAAGGAATCGAGATCAGCCGTCCAGAGGAGC...CCACTGGCTCCTGGTTGGAACGAAAGGGTCTCTGGTTGCACTGAATGCAGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp AGAGCTGCATTCAGTGCAACCAGAGACCCTTTCGTTCCAACCAGGAGCCAGTGGCTCCTCTCTCCCAGATaGCGCTCATGCGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: RAAFSATRDPFVPTRSQWLLSPR*RSCGPA
Trigger: TGCAGGACCGCATGAGCGTCATCTGGGAGAGAGGAG...CCACTGGCTCCTGGTTGGAACGAAAGGGTCTCTGGTTGCACTGAATGCAGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp TTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTAGAGAGCCAGAGAGGCTaGAGCTGGATTCGTGAAGGT +
Preference number: 4 (lower is better)
Translates to: FPGATGHTSLRRRHSEKVESQRG*SWIREG
Trigger: ACCTTCACGAATCCAGCTTCAGCCTCTCTGGCTCTC...TACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp TTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTAAGCGAGGATCCGAGCTaGAGCTCGCTTTGGAACATG +
Preference number: 4 (lower is better)
Translates to: FPGATGHTSLRRRHSEKVSEDPS*SSLWNM
Trigger: CATGTTCCAAAGCGAGCTTCAGCTCGGATCCTCGCT...TACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp CGGGGGCTGAAATCACATGTGCAACATGAAGTCACTTCCCACGGGGCAGACCAGACACAGGAGGAGCGCTaGGTCTCTGTCCAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: RGLKSHVQHEVTSHGADQTQEER*VSVQQE
Trigger: TTCCTGCTGGACAGAGACTCAGCGCTCCTCCTGTGT...CTGGTCTGCCCCGTGGGAAGTGACTTCATGTTGCACATGTGATTTCAGCCCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp CCTGGTGCCGACCACGGGAGATCACGGCACCTGAGCAGCAATGCGGGTTCGACAAGTGCTCCATTGTCATaGGGACTAAGTGAGAGGTCA +
Preference number: 4 (lower is better)
Translates to: PGADHGRSRHLSSNAGSTSAPLS*GLSERS
Trigger: TGACCTCTCACTTAGTCCTCATGACAATGGAGCACT...TGTCGAACCCGCATTGCTGCTCAGGTGCCGTGATCTCCCGTGGTCGGCACCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp AGAGCTGCATTCAGTGCAACCAGAGACCCTTTCGTTCCAACCAGGAGCCAGTGGTGTCCTCTCAGCCCCTaGGTGAGGAAAGGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: RAAFSATRDPFVPTRSQWCPLSP*VRKGGV
Trigger: CACTCCCCCTTTCCTCACTCAGGGGCTGAGAGGACA...CCACTGGCTCCTGGTTGGAACGAAAGGGTCTCTGGTTGCACTGAATGCAGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp GAAGCCTCGCGCAAGCCTCGGGGGCTGAAATCACATGTGCAACATGAAGTCACTGTGCATGGTGGGGGCTaGCCGCTCATTTGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: EASRKPRGLKSHVQHEVTVHGGG*PLIWLL
Trigger: AAGGAGCCAAATGAGCGGTCAGCCCCCACCATGCAC...AGTGACTTCATGTTGCACATGTGATTTCAGCCCCCGAGGCTTGCGCGAGGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp GAGATAGGACGTCCTGGGCATGGCTGGGAAGCTGACATCTGTCTGACTTGGGAAAGCTCGCGGCCCACCTaGTGGATGATGCCATTCTCG +
Preference number: 4 (lower is better)
Translates to: EIGRPGHGWEADICLTWESSRPT*WMMPFS
Trigger: CGAGAATGGCATCATCCAGCAGGTGGGCCGCGAGCT...TTCCCAAGTCAGACAGATGTCAGCTTCCCAGCCATGCCCAGGACGTCCTATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp TTCCAATGGCTGCCACTTGCCATGAGCCCCTTCGCCACCTCTGCTCCCCGGCTGAGCACAACCTTCCCTTaGATCTTAGCAGCTGCGATA +
Preference number: 4 (lower is better)
Translates to: FQWLPLAMSPFATSAPRLSTTFP*ILAAAI
Trigger: TATCGCAGCTGCTAAGATGCAAGGGAAGGTTGTGCT...CAGCCGGGGAGCAGAGGTGGCGAAGGGGCTCATGGCAAGTGGCAGCCATTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp GCTTTCCTAGCCCAAGCAAGGATGCTCTGCCCAGCTGGCCACCACCGCTGCTGCAGCACAACCTTCCCTTaGATCTTAGCAGCTGCGATA +
Preference number: 4 (lower is better)
Translates to: AFLAQARMLCPAGHHRCCSTTFP*ILAAAI
Trigger: TATCGCAGCTGCTAAGATGCAAGGGAAGGTTGTGCT...GCAGCAGCGGTGGTGGCCAGCTGGGCAGAGCATCCTTGCTTGGGCTAGGAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp ACTGGAGGTGGAAGGAGACACCCGGCCTCTAGTGTTTCCATGGGAACTTCTGTGCGCAGCCCAGAAGACTaGAGGCGGGGAAAAGAGAGG +
Preference number: 4 (lower is better)
Translates to: TGGGRRHPASSVSMGTSVRSPED*RRGKER
Trigger: CCTCTCTTTTCCCCGCCTGCAGTCTTCTGGGCTGCG...CACAGAAGTTCCCATGGAAACACTAGAGGCCGGGTGTCTCCTTCCACCTCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp AGAGCTGCATTCAGTGCAACCAGAGACCCTTTCGTTCCAACCAGGAGCCAGTGGGCACCTGAGCAGCAATaGGGGTTCGACAGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: RAAFSATRDPFVPTRSQWAPEQQ*GFDSQV
Trigger: GACCTGGCTGTCGAACCCGCATTGCTGCTCAGGTGC...CCACTGGCTCCTGGTTGGAACGAAAGGGTCTCTGGTTGCACTGAATGCAGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp ACTGGAGGTGGAAGGAGACACCCGGCCTCTAGTGTTTCCATGGGAACTTCTGTGGTGATCTTGGCTCACTaGAAGCTCCGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: TGGGRRHPASSVSMGTSVVILAH*KLRLPG
Trigger: ACCCGGGAGGCGGAGCTTGCAGTGAGCCAAGATCAC...CACAGAAGTTCCCATGGAAACACTAGAGGCCGGGTGTCTCCTTCCACCTCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp AGAGCTGCATTCAGTGCAACCAGAGACCCTTTCGTTCCAACCAGGAGCCAGTGGCCAATGGCTGCCACTTaGCATGAGCCCCTTCGCCAC +
Preference number: 4 (lower is better)
Translates to: RAAFSATRDPFVPTRSQWPMAAT*HEPLRH
Trigger: GTGGCGAAGGGGCTCATGGCAAGTGGCAGCCATTGG...CCACTGGCTCCTGGTTGGAACGAAAGGGTCTCTGGTTGCACTGAATGCAGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp AGAGCTGCATTCAGTGCAACCAGAGACCCTTTCGTTCCAACCAGGAGCCAGTGGGGGATAGAGATGGTGTaGACTGCACCAGGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: RAAFSATRDPFVPTRSQWGIEMV*TAPGGG
Trigger: GCCGCCTCCTGGTGCAGTGCACACCATCTCTATCCC...CCACTGGCTCCTGGTTGGAACGAAAGGGTCTCTGGTTGCACTGAATGCAGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp TTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTAAAGGTCTGGTGGAAGTaGGTGCTGGTGTCGATGCCA +
Preference number: 4 (lower is better)
Translates to: FPGATGHTSLRRRHSEKVKVWWK*VLVSMP
Trigger: TGGCATCGACACCAGCACCCACTTCCACCAGACCTT...TACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp AGAGCTGCATTCAGTGCAACCAGAGACCCTTTCGTTCCAACCAGGAGCCAGTGGACACAGGGCCAGAGGTaGGTTGGGGGAGATAGGACG +
Preference number: 4 (lower is better)
Translates to: RAAFSATRDPFVPTRSQWTQGQR*VGGDRT
Trigger: CGTCCTATCTCCCCCAACCCACCTCTGGCCCTGTGT...CCACTGGCTCCTGGTTGGAACGAAAGGGTCTCTGGTTGCACTGAATGCAGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp CGGGGGCTGAAATCACATGTGCAACATGAAGTCACTTCCCACGGGGCAGACCAGACAAGGGCAGGCGGCTaGGTCACTTCCCAGATCACT +
Preference number: 4 (lower is better)
Translates to: RGLKSHVQHEVTSHGADQTRAGG*VTSQIT
Trigger: AGTGATCTGGGAAGTGACCCAGCCGCCTGCCCTTGT...CTGGTCTGCCCCGTGGGAAGTGACTTCATGTTGCACATGTGATTTCAGCCCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp ACTGGAGGTGGAAGGAGACACCCGGCCTCTAGTGTTTCCATGGGAACTTCTGTGGACCACTCCAAGACGTaGTTCCCTGGTGCCACGGGT +
Preference number: 4 (lower is better)
Translates to: TGGGRRHPASSVSMGTSVDHSKT*FPGATG
Trigger: ACCCGTGGCACCAGGGAACCACGTCTTGGAGTGGTC...CACAGAAGTTCCCATGGAAACACTAGAGGCCGGGTGTCTCCTTCCACCTCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp AGCTCTGCACGGGGCAAGGAGTGCATGGTGGGGGCTGACCGCTCATTTGGCTCCTTCCTTGTGGTTCTGTaGCTTCTGGGTCAGTATCAG +
Preference number: 4 (lower is better)
Translates to: SSARGKECMVGADRSFGSFLVVL*LLGQYQ
Trigger: CTGATACTGACCCAGAAGCCACAGAACCACAAGGAA...GGAGCCAAATGAGCGGTCAGCCCCCACCATGCACTCCTTGCCCCGTGCAGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp AGAGCTGCATTCAGTGCAACCAGAGACCCTTTCGTTCCAACCAGGAGCCAGTGGCTGAAGCTGGATTCGTaGAGGTCCCTCATGCCCCCA +
Preference number: 4 (lower is better)
Translates to: RAAFSATRDPFVPTRSQWLKLDS*RSLMPP
Trigger: TGGGGGCATGAGGGACCTTCACGAATCCAGCTTCAG...CCACTGGCTCCTGGTTGGAACGAAAGGGTCTCTGGTTGCACTGAATGCAGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp GCGCAAACCAAACGTGCAAAACAAAACCATTTACACGCGCCTGGCACCAGCCTCGGAGATCACGGCACCTaGGCAGCAATGCGGGTTCGA +
Preference number: 4 (lower is better)
Translates to: AQTKRAKQNHLHAPGTSLGDHGT*AAMRVR
Trigger: TCGAACCCGCATTGCTGCTCAGGTGCCGTGATCTCC...GAGGCTGGTGCCAGGCGCGTGTAAATGGTTTTGTTTTGCACGTTTGGTTTGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp TTCCAATGGCTGCCACTTGCCATGAGCCCCTTCGCCACCTCTGCTCCCCGGCTGGTCATGAGGACTAAGTaGGAGGTCATATACGGAAGT +
Preference number: 4 (lower is better)
Translates to: FQWLPLAMSPFATSAPRLVMRTK*EVIYGS
Trigger: ACTTCCGTATATGACCTCTCACTTAGTCCTCATGAC...CAGCCGGGGAGCAGAGGTGGCGAAGGGGCTCATGGCAAGTGGCAGCCATTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp GCTTTCCTAGCCCAAGCAAGGATGCTCTGCCCAGCTGGCCACCACCGCTGCTGCAGTACAAGACCAGTTTaGGAGCTGCATTCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: AFLAQARMLCPAGHHRCCSTRPV*ELHSVQ
Trigger: TTGCACTGAATGCAGCTCTCAAACTGGTCTTGTACT...GCAGCAGCGGTGGTGGCCAGCTGGGCAGAGCATCCTTGCTTGGGCTAGGAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp GAAGCCTCGCGCAAGCCTCGGGGGCTGAAATCACATGTGCAACATGAAGTCACTTCTGGTGGAAGTGGGTaGTGGTGTCGATGCCACCAG +
Preference number: 4 (lower is better)
Translates to: EASRKPRGLKSHVQHEVTSGGSG*WCRCHQ
Trigger: CTGGTGGCATCGACACCAGCACCCACTTCCACCAGA...AGTGACTTCATGTTGCACATGTGATTTCAGCCCCCGAGGCTTGCGCGAGGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp GAGATAGGACGTCCTGGGCATGGCTGGGAAGCTGACATCTGTCTGACTTGGGAATGCTTTCACCTTGGGTaGCCACCAGGTGATCCCCAC +
Preference number: 4 (lower is better)
Translates to: EIGRPGHGWEADICLTWECFHLG*PPGDPH
Trigger: GTGGGGATCACCTGGTGGGCACCCAAGGTGAAAGCA...TTCCCAAGTCAGACAGATGTCAGCTTCCCAGCCATGCCCAGGACGTCCTATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp GAGATAGGACGTCCTGGGCATGGCTGGGAAGCTGACATCTGTCTGACTTGGGAAATGGACGCGGGCGATTaGCCCAATGTCCTTGCAAGC +
Preference number: 4 (lower is better)
Translates to: EIGRPGHGWEADICLTWEMDAGD*PNVLAS
Trigger: GCTTGCAAGGACATTGGGGCAATCGCCCGCGTCCAT...TTCCCAAGTCAGACAGATGTCAGCTTCCCAGCCATGCCCAGGACGTCCTATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp GAAGCCTCGCGCAAGCCTCGGGGGCTGAAATCACATGTGCAACATGAAGTCACTGATCCCCAAATCCAGTaGCTCCTTAGCACCCTCGGC +
Preference number: 4 (lower is better)
Translates to: EASRKPRGLKSHVQHEVTDPQIQ*LLSTLG
Trigger: GCCGAGGGTGCTAAGGAGGCACTGGATTTGGGGATC...AGTGACTTCATGTTGCACATGTGATTTCAGCCCCCGAGGCTTGCGCGAGGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp ACAGAGACCTACTGTGGACTCCTAGCACTACACACACGCACGCACACGCACACAGATCCCCAAATCCAGTaGCTCCTTAGCACCCTCGGC +
Preference number: 4 (lower is better)
Translates to: TETYCGLLALHTRTHTHTDPQIQ*LLSTLG
Trigger: GCCGAGGGTGCTAAGGAGGCACTGGATTTGGGGATC...TGTGTGCGTGTGCGTGCGTGTGTGTAGTGCTAGGAGTCCACAGTAGGTCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp AGAGCTGCATTCAGTGCAACCAGAGACCCTTTCGTTCCAACCAGGAGCCAGTGGACGCTCATGCGGTCCTaGACGCCACTCACTCCATGT +
Preference number: 4 (lower is better)
Translates to: RAAFSATRDPFVPTRSQWTLMRS*TPLTPC
Trigger: ACATGGAGTGAGTGGCGTGCAGGACCGCATGAGCGT...CCACTGGCTCCTGGTTGGAACGAAAGGGTCTCTGGTTGCACTGAATGCAGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp GAAGCCTCGCGCAAGCCTCGGGGGCTGAAATCACATGTGCAACATGAAGTCACTCTCCCTGGACCTGCGTaGTGGCTGAGATGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: EASRKPRGLKSHVQHEVTLPGPA*WLRWSL
Trigger: CAAAGACCATCTCAGCCAGCACGCAGGTCCAGGGAG...AGTGACTTCATGTTGCACATGTGATTTCAGCCCCCGAGGCTTGCGCGAGGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp AGAAGTTATAGGAAGCCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTGGCAAGGGCCTGGTaGCGACCACGGGAGATCACG +
Preference number: 4 (lower is better)
Translates to: RSYRKPCVCVCVCVCVCVLARAW*RPREIT
Trigger: CGTGATCTCCCGTGGTCGGCACCAGGCCCTTGCCAG...CACACACACACACACACACACACACACACACACGCACGGCTTCCTATAACTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp ACTGGAGGTGGAAGGAGACACCCGGCCTCTAGTGTTTCCATGGGAACTTCTGTGAGAGATGGTGTGCACTaGACCAGGAGGCGGCGTCAT +
Preference number: 4 (lower is better)
Translates to: TGGGRRHPASSVSMGTSVRDGVH*TRRRRH
Trigger: ATGACGCCGCCTCCTGGTGCAGTGCACACCATCTCT...CACAGAAGTTCCCATGGAAACACTAGAGGCCGGGTGTCTCCTTCCACCTCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp GAAGCCTCGCGCAAGCCTCGGGGGCTGAAATCACATGTGCAACATGAAGTCACTGGGCTCTTTGACATCTaGCCAAGGCCCATGACCCAG +
Preference number: 4 (lower is better)
Translates to: EASRKPRGLKSHVQHEVTGLFDI*PRPMTQ
Trigger: CTGGGTCATGGGCCTTGGGCAGATGTCAAAGAGCCC...AGTGACTTCATGTTGCACATGTGATTTCAGCCCCCGAGGCTTGCGCGAGGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp ACTGGAGGTGGAAGGAGACACCCGGCCTCTAGTGTTTCCATGGGAACTTCTGTGGGGCTCTTTGACATCTaGCCAAGGCCCATGACCCAG +
Preference number: 4 (lower is better)
Translates to: TGGGRRHPASSVSMGTSVGLFDI*PRPMTQ
Trigger: CTGGGTCATGGGCCTTGGGCAGATGTCAAAGAGCCC...CACAGAAGTTCCCATGGAAACACTAGAGGCCGGGTGTCTCCTTCCACCTCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp AGAGCTGCATTCAGTGCAACCAGAGACCCTTTCGTTCCAACCAGGAGCCAGTGGGACGTGGTTCCCTGGTaGCACGGGTCACACATCTCT +
Preference number: 4 (lower is better)
Translates to: RAAFSATRDPFVPTRSQWDVVPW*HGSHIS
Trigger: AGAGATGTGTGACCCGTGGCACCAGGGAACCACGTC...CCACTGGCTCCTGGTTGGAACGAAAGGGTCTCTGGTTGCACTGAATGCAGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp ACAGAGACCTACTGTGGACTCCTAGCACTACACACACGCACGCACACGCACACAGACGTGGTTCCCTGGTaGCACGGGTCACACATCTCT +
Preference number: 4 (lower is better)
Translates to: TETYCGLLALHTRTHTHTDVVPW*HGSHIS
Trigger: AGAGATGTGTGACCCGTGGCACCAGGGAACCACGTC...TGTGTGCGTGTGCGTGCGTGTGTGTAGTGCTAGGAGTCCACAGTAGGTCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp AGGGCCAGGGCCTCCCGCAGCCCAGAAGACTGCAGGCGGGGAAAAGAGAGGCCTAGTTTAATACAAACCTaGACCAGAACACAACGTGTC +
Preference number: 4 (lower is better)
Translates to: RARASRSPEDCRRGKERPSLIQT*TRTQRV
Trigger: GACACGTTGTGTTCTGGTGCAGGTTTGTATTAAACT...AGGCCTCTCTTTTCCCCGCCTGCAGTCTTCTGGGCTGCGGGAGGCCCTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp GTTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTTCACCAGTTTTCCTGTaGCATCAATCACCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: VPWCHGSHISQAEALREGSPVFL*HQSPWP
Trigger: GGGCCAAGGTGATTGATGCCACAGGAAAACTGGTGA...ACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp GAAGCCTCGCGCAAGCCTCGGGGGCTGAAATCACATGTGCAACATGAAGTCACTTTGTCGGGCAGGACGTaGCCGATGATCATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: EASRKPRGLKSHVQHEVTLSGRT*PMIMVV
Trigger: CACCACCATGATCATCGGCCACGTCCTGCCCGACAA...AGTGACTTCATGTTGCACATGTGATTTCAGCCCCCGAGGCTTGCGCGAGGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp ACAGAGACCTACTGTGGACTCCTAGCACTACACACACGCACGCACACGCACACATTGTCGGGCAGGACGTaGCCGATGATCATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: TETYCGLLALHTRTHTHTLSGRT*PMIMVV
Trigger: CACCACCATGATCATCGGCCACGTCCTGCCCGACAA...TGTGTGCGTGTGCGTGCGTGTGTGTAGTGCTAGGAGTCCACAGTAGGTCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp GAGATAGGACGTCCTGGGCATGGCTGGGAAGCTGACATCTGTCTGACTTGGGAATGGCATGTGCAGTGGTaGTCTCCGCCAGCACAACCT +
Preference number: 4 (lower is better)
Translates to: EIGRPGHGWEADICLTWEWHVQW*SPPAQP
Trigger: AGGTTGTGCTGGCGGAGACCACCACTGCACATGCCA...TTCCCAAGTCAGACAGATGTCAGCTTCCCAGCCATGCCCAGGACGTCCTATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp AGAGCTGCATTCAGTGCAACCAGAGACCCTTTCGTTCCAACCAGGAGCCAGTGGCCTGGACCTGCGTGCTaGCTGAGATGGTCTTTGTGG +
Preference number: 4 (lower is better)
Translates to: RAAFSATRDPFVPTRSQWPGPAC*LRWSLW
Trigger: CCACAAAGACCATCTCAGCCAGCACGCAGGTCCAGG...CCACTGGCTCCTGGTTGGAACGAAAGGGTCTCTGGTTGCACTGAATGCAGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp ACAGAGACCTACTGTGGACTCCTAGCACTACACACACGCACGCACACGCACACATTGAAGTCTCCTCCCTaGACCTGCGTGCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: TETYCGLLALHTRTHTHTLKSPP*TCVLAE
Trigger: CTCAGCCAGCACGCAGGTCCAGGGAGGAGACTTCAA...TGTGTGCGTGTGCGTGCGTGTGTGTAGTGCTAGGAGTCCACAGTAGGTCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp AGAGCTGCATTCAGTGCAACCAGAGACCCTTTCGTTCCAACCAGGAGCCAGTGGTTGAAGTCTCCTCCCTaGACCTGCGTGCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: RAAFSATRDPFVPTRSQWLKSPP*TCVLAE
Trigger: CTCAGCCAGCACGCAGGTCCAGGGAGGAGACTTCAA...CCACTGGCTCCTGGTTGGAACGAAAGGGTCTCTGGTTGCACTGAATGCAGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp GAAGCCTCGCGCAAGCCTCGGGGGCTGAAATCACATGTGCAACATGAAGTCACTGCTCTGTGCATAGTGTaGGCTTCCTGGGCCCCAGAA +
Preference number: 4 (lower is better)
Translates to: EASRKPRGLKSHVQHEVTALCIV*ASWAPE
Trigger: TTCTGGGGCCCAGGAAGCCCACACTATGCACAGAGC...AGTGACTTCATGTTGCACATGTGATTTCAGCCCCCGAGGCTTGCGCGAGGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp CGGGGGCTGAAATCACATGTGCAACATGAAGTCACTTCCCACGGGGCAGACCAGTCACCCCTGTTCCAATaGCTGCCACTTGCCATGAGC +
Preference number: 4 (lower is better)
Translates to: RGLKSHVQHEVTSHGADQSPLFQ*LPLAMS
Trigger: GCTCATGGCAAGTGGCAGCCATTGGAACAGGGGTGA...CTGGTCTGCCCCGTGGGAAGTGACTTCATGTTGCACATGTGATTTCAGCCCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp ACAGAGACCTACTGTGGACTCCTAGCACTACACACACGCACGCACACGCACACACAAGACGTGGTTCCCTaGTGCCACGGGTCACACATC +
Preference number: 4 (lower is better)
Translates to: TETYCGLLALHTRTHTHTQDVVP*CHGSHI
Trigger: GATGTGTGACCCGTGGCACCAGGGAACCACGTCTTG...TGTGTGCGTGTGCGTGCGTGTGTGTAGTGCTAGGAGTCCACAGTAGGTCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp ACAGAGACCTACTGTGGACTCCTAGCACTACACACACGCACGCACACGCACACATGTAGGGACTGGGGGTaGATGAAGCGCATGGCCTAC +
Preference number: 4 (lower is better)
Translates to: TETYCGLLALHTRTHTHTCRDWG*MKRMAY
Trigger: GTAGGCCATGCGCTTCATCCACCCCCAGTCCCTACA...TGTGTGCGTGTGCGTGCGTGTGTGTAGTGCTAGGAGTCCACAGTAGGTCTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp GAAGCCTCGCGCAAGCCTCGGGGGCTGAAATCACATGTGCAACATGAAGTCACTGATCCTCACGCTGGCTaGGTTGGCAAGCATGTTCTC +
Preference number: 4 (lower is better)
Translates to: EASRKPRGLKSHVQHEVTDPHAG*VGKHVL
Trigger: GAGAACATGCTTGCCAACTCAGCCAGCGTGAGGATC...AGTGACTTCATGTTGCACATGTGATTTCAGCCCCCGAGGCTTGCGCGAGGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288699.11
CDS-3UTR TCA 90 bp CTGTGCAAAACAAAGCAGGCTGCCTACCAGGAAAGTAAGTCTTCTCATTGGTTACCCCGCCAGGGATCATaGGCTCGCGGCCCACCTGCT +
Preference number: 4 (lower is better)
Translates to: LCKTKQAAYQESKSSHWLPRQGS*ARGPPA
Trigger: AGCAGGTGGGCCGCGAGCTCATGATCCCTGGCGGGG...TAACCAATGAGAAGACTTACTTTCCTGGTAGGCAGCCTGCTTTGTTTTGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp ACTGGAGGTGGAAGGAGACACCCGGCCTCTAGTGTTTCCATGGGAACTTCTGTGTTCCTTCTGGGCCTGTaGTCCCCAAATCCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: TGGGRRHPASSVSMGTSVFLLGL*SPNPVP
Trigger: AGGCACTGGATTTGGGGATCACAGGCCCAGAAGGAA...CACAGAAGTTCCCATGGAAACACTAGAGGCCGGGTGTCTCCTTCCACCTCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp GAGATAGGACGTCCTGGGCATGGCTGGGAAGCTGACATCTGTCTGACTTGGGAAGAGAGCCAGAGAGGCTaGAGCTGGATTCGTGAAGGT +
Preference number: 4 (lower is better)
Translates to: EIGRPGHGWEADICLTWEESQRG*SWIREG
Trigger: ACCTTCACGAATCCAGCTTCAGCCTCTCTGGCTCTC...TTCCCAAGTCAGACAGATGTCAGCTTCCCAGCCATGCCCAGGACGTCCTATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp GAAGCCTCGCGCAAGCCTCGGGGGCTGAAATCACATGTGCAACATGAAGTCACTGCAAGCCTCGGGGGCTaGAATCACATGTGCAACATG +
Preference number: 4 (lower is better)
Translates to: EASRKPRGLKSHVQHEVTASLGG*NHMCNM
Trigger: CATGTTGCACATGTGATTTCAGCCCCCGAGGCTTGC...AGTGACTTCATGTTGCACATGTGATTTCAGCCCCCGAGGCTTGCGCGAGGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp AGAGCTGCATTCAGTGCAACCAGAGACCCTTTCGTTCCAACCAGGAGCCAGTGGGCAAGCCTCGGGGGCTaGAATCACATGTGCAACATG +
Preference number: 4 (lower is better)
Translates to: RAAFSATRDPFVPTRSQWASLGG*NHMCNM
Trigger: CATGTTGCACATGTGATTTCAGCCCCCGAGGCTTGC...CCACTGGCTCCTGGTTGGAACGAAAGGGTCTCTGGTTGCACTGAATGCAGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp CGGGGGCTGAAATCACATGTGCAACATGAAGTCACTTCCCACGGGGCAGACCAGGTGTCGTCTTGGGGTTaGCACAGTCTTAGCACCATG +
Preference number: 4 (lower is better)
Translates to: RGLKSHVQHEVTSHGADQVSSWG*HSLSTM
Trigger: CATGGTGCTAAGACTGTGTCAACCCCAAGACGACAC...CTGGTCTGCCCCGTGGGAAGTGACTTCATGTTGCACATGTGATTTCAGCCCCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp GCGCAAACCAAACGTGCAAAACAAAACCATTTACACGCGCCTGGCACCAGCCTCGGGTGCTGGTGTCGATaGCACCAGGGATCACCAGTT +
Preference number: 4 (lower is better)
Translates to: AQTKRAKQNHLHAPGTSLGCWCR*HQGSPV
Trigger: AACTGGTGATCCCTGGTGGCATCGACACCAGCACCC...GAGGCTGGTGCCAGGCGCGTGTAAATGGTTTTGTTTTGCACGTTTGGTTTGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp GTTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTATGTCCTTGCAAGCGTaGAACACTTGGTACAGCTCA +
Preference number: 4 (lower is better)
Translates to: VPWCHGSHISQAEALREGMSLQA*NTWYSS
Trigger: TGAGCTGTACCAAGTGTTGCACGCTTGCAAGGACAT...ACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp GCTTTCCTAGCCCAAGCAAGGATGCTCTGCCCAGCTGGCCACCACCGCTGCTGCACAGTGAGTCCTGTTTaGAATGGTGATAACACGATG +
Preference number: 4 (lower is better)
Translates to: AFLAQARMLCPAGHHRCCTVSPV*NGDNTM
Trigger: CATCGTGTTATCACCATTGCAAACAGGACTCACTGT...GCAGCAGCGGTGGTGGCCAGCTGGGCAGAGCATCCTTGCTTGGGCTAGGAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp CCTGGTGCCGACCACGGGAGATCACGGCACCTGAGCAGCAATGCGGGTTCGACAGTCAAACCAAACTACTaGGCAAACCAAACGTGCAAA +
Preference number: 4 (lower is better)
Translates to: PGADHGRSRHLSSNAGSTVKPNY*ANQTCK
Trigger: TTTGCACGTTTGGTTTGCGCAGTAGTTTGGTTTGAC...TGTCGAACCCGCATTGCTGCTCAGGTGCCGTGATCTCCCGTGGTCGGCACCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp AGAGCTGCATTCAGTGCAACCAGAGACCCTTTCGTTCCAACCAGGAGCCAGTGGCGACGAGTGCTGCCTTaGTCCCATGGTAGAAGTCGT +
Preference number: 4 (lower is better)
Translates to: RAAFSATRDPFVPTRSQWRRVLP*SHGRSR
Trigger: ACGACTTCTACCATGGGACCAAGGCAGCACTCGTCG...CCACTGGCTCCTGGTTGGAACGAAAGGGTCTCTGGTTGCACTGAATGCAGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp TTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTACAAGCGTGCAACACTTaGTACAGCTCACTGTCTCGA +
Preference number: 4 (lower is better)
Translates to: FPGATGHTSLRRRHSEKVQACNT*YSSLSR
Trigger: TCGAGACAGTGAGCTGTACCAAGTGTTGCACGCTTG...TACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp GAAGCCTCGCGCAAGCCTCGGGGGCTGAAATCACATGTGCAACATGAAGTCACTAGCTTCCAGCTCCTCTaGACGGCTGATCTCGATTCC +
Preference number: 4 (lower is better)
Translates to: EASRKPRGLKSHVQHEVTSFQLL*TADLDS
Trigger: GGAATCGAGATCAGCCGTCCAGAGGAGCTGGAAGCT...AGTGACTTCATGTTGCACATGTGATTTCAGCCCCCGAGGCTTGCGCGAGGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp GCGCAAACCAAACGTGCAAAACAAAACCATTTACACGCGCCTGGCACCAGCCTCGCTCTGTGCATAGTGTaGGCTTCCTGGGCCCCAGAA +
Preference number: 4 (lower is better)
Translates to: AQTKRAKQNHLHAPGTSLALCIV*ASWAPE
Trigger: TTCTGGGGCCCAGGAAGCCCACACTATGCACAGAGC...GAGGCTGGTGCCAGGCGCGTGTAAATGGTTTTGTTTTGCACGTTTGGTTTGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp AGAGCTGCATTCAGTGCAACCAGAGACCCTTTCGTTCCAACCAGGAGCCAGTGGTCTGCTAAAGTGCTCTaGGCAACTGGCCAGTCAGCC +
Preference number: 4 (lower is better)
Translates to: RAAFSATRDPFVPTRSQWSAKVL*ATGQSA
Trigger: GGCTGACTGGCCAGTTGCCCAGAGCACTTTAGCAGA...CCACTGGCTCCTGGTTGGAACGAAAGGGTCTCTGGTTGCACTGAATGCAGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp CGGGGGCTGAAATCACATGTGCAACATGAAGTCACTTCCCACGGGGCAGACCAGGACATCTGTCTGACTTaGGAAATGTCACCACGGGGC +
Preference number: 4 (lower is better)
Translates to: RGLKSHVQHEVTSHGADQDICLT*EMSPRG
Trigger: GCCCCGTGGTGACATTTCCCAAGTCAGACAGATGTC...CTGGTCTGCCCCGTGGGAAGTGACTTCATGTTGCACATGTGATTTCAGCCCCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp AGAAGTTATAGGAAGCCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGCCTCCTCAGTAGCTaGGACTACAGGCGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: RSYRKPCVCVCVCVCVCVSLLSS*DYRRPP
Trigger: TGGCGGGCGCCTGTAGTCCCAGCTACTGAGGAGGCT...CACACACACACACACACACACACACACACACACGCACGGCTTCCTATAACTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp GCGCAAACCAAACGTGCAAAACAAAACCATTTACACGCGCCTGGCACCAGCCTCGGAGAAGTGAGGGTGTaGACGCAGCTCACACTGCAC +
Preference number: 4 (lower is better)
Translates to: AQTKRAKQNHLHAPGTSLGEVRV*TQLTLH
Trigger: GTGCAGTGTGAGCTGCGTCCACACCCTCACTTCTCC...GAGGCTGGTGCCAGGCGCGTGTAAATGGTTTTGTTTTGCACGTTTGGTTTGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp GCGCAAACCAAACGTGCAAAACAAAACCATTTACACGCGCCTGGCACCAGCCTCTGTAGGGACTGGGGGTaGATGAAGCGCATGGCCTAC +
Preference number: 4 (lower is better)
Translates to: AQTKRAKQNHLHAPGTSLCRDWG*MKRMAY
Trigger: GTAGGCCATGCGCTTCATCCACCCCCAGTCCCTACA...GAGGCTGGTGCCAGGCGCGTGTAAATGGTTTTGTTTTGCACGTTTGGTTTGCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp GCGCAAACCAAACGTGCAAAACAAAACCATTTACACGCGCCTGGCACCAGCCTCGGCCTATGTAGGGACTaGGGGTGGATGAAGCGCATG +
Preference number: 4 (lower is better)
Translates to: AQTKRAKQNHLHAPGTSLGLCRD*GWMKRM
Trigger: CATGCGCTTCATCCACCCCCAGTCCCTACATAGGCC...GAGGCTGGTGCCAGGCGCGTGTAAATGGTTTTGTTTTGCACGTTTGGTTTGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp GCGCAAACCAAACGTGCAAAACAAAACCATTTACACGCGCCTGGCACCAGCCTCGCAAGGAGTGCATGGTaGGGGCTGACCGCTCATTTG +
Preference number: 4 (lower is better)
Translates to: AQTKRAKQNHLHAPGTSLARSAW*GLTAHL
Trigger: CAAATGAGCGGTCAGCCCCCACCATGCACTCCTTGC...GAGGCTGGTGCCAGGCGCGTGTAAATGGTTTTGTTTTGCACGTTTGGTTTGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR CAA 72 bp CCTGCGCCTCAGCAGCTGGAGGGGGTTTGGGTTTCCTaGTGGTTCTGTGGCTTCTGGGTCAGTATCAGAAAA +
Preference number: 4 (lower is better)
Translates to: PAPQQLEGVWVS*WFCGFWVSIRK
Trigger: TTTTCTGATACTGACCCAGAAGCCACAGAACCACAAGGAAACCCAAACCCCCTCCAGCTGCTGAGGCGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp GAAGCCTCGCGCAAGCCTCGGGGGCTGAAATCACATGTGCAACATGAAGTCACTGCTCATGAGGTAGGTTaGGGTGTTGGTGTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: EASRKPRGLKSHVQHEVTAHEVG*GVGVQS
Trigger: AGACTGGACACCAACACCTCAACCTACCTCATGAGC...AGTGACTTCATGTTGCACATGTGATTTCAGCCCCCGAGGCTTGCGCGAGGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp GCGCAAACCAAACGTGCAAAACAAAACCATTTACACGCGCCTGGCACCAGCCTCGCATGGCTGGGAAGCTaGCATCTGTCTGACTTGGGA +
Preference number: 4 (lower is better)
Translates to: AQTKRAKQNHLHAPGTSLAWLGS*HLSDLG
Trigger: TCCCAAGTCAGACAGATGTCAGCTTCCCAGCCATGC...GAGGCTGGTGCCAGGCGCGTGTAAATGGTTTTGTTTTGCACGTTTGGTTTGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp AGAAGTTATAGGAAGCCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGGACACCTGCTTCCTaGAGGGCTGGCATCTCTGGG +
Preference number: 4 (lower is better)
Translates to: RSYRKPCVCVCVCVCVCVRTPAS*RAGISG
Trigger: CCCAGAGATGCCAGCCCTTCAGGAAGCAGGTGTCCT...CACACACACACACACACACACACACACACACACGCACGGCTTCCTATAACTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp GAAGCCTCGCGCAAGCCTCGGGGGCTGAAATCACATGTGCAACATGAAGTCACTATCACATGTGCAACATaGAGTCACTTCCCACGGGGC +
Preference number: 4 (lower is better)
Translates to: EASRKPRGLKSHVQHEVTITCAT*SHFPRG
Trigger: GCCCCGTGGGAAGTGACTTCATGTTGCACATGTGAT...AGTGACTTCATGTTGCACATGTGATTTCAGCCCCCGAGGCTTGCGCGAGGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp ACTGGAGGTGGAAGGAGACACCCGGCCTCTAGTGTTTCCATGGGAACTTCTGTGCCACATCTGCTAAAGTaGTCTGGGCAACTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: TGGGRRHPASSVSMGTSVPHLLK*SGQLAS
Trigger: ACTGGCCAGTTGCCCAGAGCACTTTAGCAGATGTGG...CACAGAAGTTCCCATGGAAACACTAGAGGCCGGGTGTCTCCTTCCACCTCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp GAGATAGGACGTCCTGGGCATGGCTGGGAAGCTGACATCTGTCTGACTTGGGAACCACATCTGCTAAAGTaGTCTGGGCAACTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: EIGRPGHGWEADICLTWEPHLLK*SGQLAS
Trigger: ACTGGCCAGTTGCCCAGAGCACTTTAGCAGATGTGG...TTCCCAAGTCAGACAGATGTCAGCTTCCCAGCCATGCCCAGGACGTCCTATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp AGAGCTGCATTCAGTGCAACCAGAGACCCTTTCGTTCCAACCAGGAGCCAGTGGTTCACGCTATTCTCCTaGCTCAGCCTCCTCAGTAGC +
Preference number: 4 (lower is better)
Translates to: RAAFSATRDPFVPTRSQWFTLFS*LSLLSS
Trigger: GCTACTGAGGAGGCTGAGGCAGGAGAATAGCGTGAA...CCACTGGCTCCTGGTTGGAACGAAAGGGTCTCTGGTTGCACTGAATGCAGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp AGAAGTTATAGGAAGCCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGACGCAGCTCACACTaGACGGTTAGCCCCCAATGG +
Preference number: 4 (lower is better)
Translates to: RSYRKPCVCVCVCVCVCVGRSSH*TVSPQW
Trigger: CCATTGGGGGCTAACCGTGCAGTGTGAGCTGCGTCC...CACACACACACACACACACACACACACACACACGCACGGCTTCCTATAACTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp CTGTGCAAAACAAAGCAGGCTGCCTACCAGGAAAGTAAGTCTTCTCATTGGTTAGCACGGGGCAAGGAGTaGATGGTGGGGGCTGACCGC +
Preference number: 4 (lower is better)
Translates to: LCKTKQAAYQESKSSHWLARGKE*MVGADR
Trigger: GCGGTCAGCCCCCACCATGCACTCCTTGCCCCGTGC...TAACCAATGAGAAGACTTACTTTCCTGGTAGGCAGCCTGCTTTGTTTTGCACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp GCGCAAACCAAACGTGCAAAACAAAACCATTTACACGCGCCTGGCACCAGCCTCAAGGTCTGGTGGAAGTaGGTGCTGGTGTCGATGCCA +
Preference number: 4 (lower is better)
Translates to: AQTKRAKQNHLHAPGTSLKVWWK*VLVSMP
Trigger: TGGCATCGACACCAGCACCCACTTCCACCAGACCTT...GAGGCTGGTGCCAGGCGCGTGTAAATGGTTTTGTTTTGCACGTTTGGTTTGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp GAAGCCTCGCGCAAGCCTCGGGGGCTGAAATCACATGTGCAACATGAAGTCACTTTCATGAAGGTCTGGTaGAAGTGGGTGCTGGTGTCG +
Preference number: 4 (lower is better)
Translates to: EASRKPRGLKSHVQHEVTFMKVW*KWVLVS
Trigger: CGACACCAGCACCCACTTCCACCAGACCTTCATGAA...AGTGACTTCATGTTGCACATGTGATTTCAGCCCCCGAGGCTTGCGCGAGGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp AGAGCTGCATTCAGTGCAACCAGAGACCCTTTCGTTCCAACCAGGAGCCAGTGGTTCATGAAGGTCTGGTaGAAGTGGGTGCTGGTGTCG +
Preference number: 4 (lower is better)
Translates to: RAAFSATRDPFVPTRSQWFMKVW*KWVLVS
Trigger: CGACACCAGCACCCACTTCCACCAGACCTTCATGAA...CCACTGGCTCCTGGTTGGAACGAAAGGGTCTCTGGTTGCACTGAATGCAGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp GCGCAAACCAAACGTGCAAAACAAAACCATTTACACGCGCCTGGCACCAGCCTCGGTAGGTTGAGGTGTTaGTGTCCAGTCTCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: AQTKRAKQNHLHAPGTSLGRLRC*CPVSGE
Trigger: CTCCCCTGAGACTGGACACCAACACCTCAACCTACC...GAGGCTGGTGCCAGGCGCGTGTAAATGGTTTTGTTTTGCACGTTTGGTTTGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp AGAGCTGCATTCAGTGCAACCAGAGACCCTTTCGTTCCAACCAGGAGCCAGTGGCTTGTAGACAGTGTCTaGGAAGGACCTCAGGGGACA +
Preference number: 4 (lower is better)
Translates to: RAAFSATRDPFVPTRSQWLVDSV*EGPQGT
Trigger: TGTCCCCTGAGGTCCTTCCCAGACACTGTCTACAAG...CCACTGGCTCCTGGTTGGAACGAAAGGGTCTCTGGTTGCACTGAATGCAGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp GCGCAAACCAAACGTGCAAAACAAAACCATTTACACGCGCCTGGCACCAGCCTCGTGTGTGTGTGTGTGTaGTGGCAGGTGAAGACAGGG +
Preference number: 4 (lower is better)
Translates to: AQTKRAKQNHLHAPGTSLVCVCV*WQVKTG
Trigger: CCCTGTCTTCACCTGCCACCACACACACACACACAC...GAGGCTGGTGCCAGGCGCGTGTAAATGGTTTTGTTTTGCACGTTTGGTTTGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp AGAAGTTATAGGAAGCCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAGGGAGGGCCCACCTaGATGGACAGGGGAGAAGAT +
Preference number: 4 (lower is better)
Translates to: RSYRKPCVCVCVCVCVCVQGGPT*MDRGED
Trigger: ATCTTCTCCCCTGTCCATCCAGGTGGGCCCTCCCTG...CACACACACACACACACACACACACACACACACGCACGGCTTCCTATAACTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp GCGCAAACCAAACGTGCAAAACAAAACCATTTACACGCGCCTGGCACCAGCCTCTCACCCCTGTTCCAATaGCTGCCACTTGCCATGAGC +
Preference number: 4 (lower is better)
Translates to: AQTKRAKQNHLHAPGTSLSPLFQ*LPLAMS
Trigger: GCTCATGGCAAGTGGCAGCCATTGGAACAGGGGTGA...GAGGCTGGTGCCAGGCGCGTGTAAATGGTTTTGTTTTGCACGTTTGGTTTGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp GAAGCCTCGCGCAAGCCTCGGGGGCTGAAATCACATGTGCAACATGAAGTCACTCAGCTGGAGGGGGTTTaGGTTTCCTTGTGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: EASRKPRGLKSHVQHEVTQLEGV*VSLWFC
Trigger: ACAGAACCACAAGGAAACCCAAACCCCCTCCAGCTG...AGTGACTTCATGTTGCACATGTGATTTCAGCCCCCGAGGCTTGCGCGAGGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp GAAGCCTCGCGCAAGCCTCGGGGGCTGAAATCACATGTGCAACATGAAGTCACTACATTTACAGGGGAGTaGGGAAGTCACCTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: EASRKPRGLKSHVQHEVTTFTGE*GSHLGA
Trigger: AGCACCCAGGTGACTTCCCCACTCCCCTGTAAATGT...AGTGACTTCATGTTGCACATGTGATTTCAGCCCCCGAGGCTTGCGCGAGGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp GCGCAAACCAAACGTGCAAAACAAAACCATTTACACGCGCCTGGCACCAGCCTCACATCTGGAACGAGTTaGCACCCTTCTCCCTCACCA +
Preference number: 4 (lower is better)
Translates to: AQTKRAKQNHLHAPGTSLTSGTS*HPSPSP
Trigger: TGGTGAGGGAGAAGGGTGTCAACTCGTTCCAGATGT...GAGGCTGGTGCCAGGCGCGTGTAAATGGTTTTGTTTTGCACGTTTGGTTTGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp GCGCAAACCAAACGTGCAAAACAAAACCATTTACACGCGCCTGGCACCAGCCTCGAAAGGCCGGTGATCTaGTGCCACGATGTTCAGAGT +
Preference number: 4 (lower is better)
Translates to: AQTKRAKQNHLHAPGTSLERPVI*CHDVQS
Trigger: ACTCTGAACATCGTGGCATCAGATCACCGGCCTTTC...GAGGCTGGTGCCAGGCGCGTGTAAATGGTTTTGTTTTGCACGTTTGGTTTGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp GAGATAGGACGTCCTGGGCATGGCTGGGAAGCTGACATCTGTCTGACTTGGGAATGTTCTCATACAGGTTaGAGTCTCCTCCCTGGACCT +
Preference number: 4 (lower is better)
Translates to: EIGRPGHGWEADICLTWECSHTG*SLLPGP
Trigger: AGGTCCAGGGAGGAGACTTCAACCTGTATGAGAACA...TTCCCAAGTCAGACAGATGTCAGCTTCCCAGCCATGCCCAGGACGTCCTATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp GAAGCCTCGCGCAAGCCTCGGGGGCTGAAATCACATGTGCAACATGAAGTCACTTGTTCTCATACAGGTTaGAGTCTCCTCCCTGGACCT +
Preference number: 4 (lower is better)
Translates to: EASRKPRGLKSHVQHEVTCSHTG*SLLPGP
Trigger: AGGTCCAGGGAGGAGACTTCAACCTGTATGAGAACA...AGTGACTTCATGTTGCACATGTGATTTCAGCCCCCGAGGCTTGCGCGAGGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp AGAAGTTATAGGAAGCCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCCTCGGCGCACATaGAGACGCCGTTCTCATACA +
Preference number: 4 (lower is better)
Translates to: RSYRKPCVCVCVCVCVCVCPRRT*RRRSHT
Trigger: TGTATGAGAACGGCGTCTTCATGTGCGCCGAGGGCA...CACACACACACACACACACACACACACACACACGCACGGCTTCCTATAACTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp ACTGGAGGTGGAAGGAGACACCCGGCCTCTAGTGTTTCCATGGGAACTTCTGTGTGGGGTCAGAGGACCTaGACTTTCTGGGTCTTAGTT +
Preference number: 4 (lower is better)
Translates to: TGGGRRHPASSVSMGTSVWGQRT*TFWVLV
Trigger: AACTAAGACCCAGAAAGTTCAGGTCCTCTGACCCCA...CACAGAAGTTCCCATGGAAACACTAGAGGCCGGGTGTCTCCTTCCACCTCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp ACTGGAGGTGGAAGGAGACACCCGGCCTCTAGTGTTTCCATGGGAACTTCTGTGTTAGCCCCCAATGGGTaGCTAGTCTTGGCTCAAACA +
Preference number: 4 (lower is better)
Translates to: TGGGRRHPASSVSMGTSVLAPNG*LVLAQT
Trigger: TGTTTGAGCCAAGACTAGTCACCCATTGGGGGCTAA...CACAGAAGTTCCCATGGAAACACTAGAGGCCGGGTGTCTCCTTCCACCTCCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp CGGGGGCTGAAATCACATGTGCAACATGAAGTCACTTCCCACGGGGCAGACCAGATGTCCTTGCAAGCGTaGAACACTTGGTACAGCTCA +
Preference number: 4 (lower is better)
Translates to: RGLKSHVQHEVTSHGADQMSLQA*NTWYSS
Trigger: TGAGCTGTACCAAGTGTTGCACGCTTGCAAGGACAT...CTGGTCTGCCCCGTGGGAAGTGACTTCATGTTGCACATGTGATTTCAGCCCCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp AGAGCTGCATTCAGTGCAACCAGAGACCCTTTCGTTCCAACCAGGAGCCAGTGGTTGCCCCAATGTCCTTaGAAGCGTGCAACACTTGGT +
Preference number: 4 (lower is better)
Translates to: RAAFSATRDPFVPTRSQWLPQCP*KRATLG
Trigger: ACCAAGTGTTGCACGCTTGCAAGGACATTGGGGCAA...CCACTGGCTCCTGGTTGGAACGAAAGGGTCTCTGGTTGCACTGAATGCAGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp GAAGCCTCGCGCAAGCCTCGGGGGCTGAAATCACATGTGCAACATGAAGTCACTTTGCCCCAATGTCCTTaGAAGCGTGCAACACTTGGT +
Preference number: 4 (lower is better)
Translates to: EASRKPRGLKSHVQHEVTLPQCP*KRATLG
Trigger: ACCAAGTGTTGCACGCTTGCAAGGACATTGGGGCAA...AGTGACTTCATGTTGCACATGTGATTTCAGCCCCCGAGGCTTGCGCGAGGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp AGAGCTGCATTCAGTGCAACCAGAGACCCTTTCGTTCCAACCAGGAGCCAGTGGTTGCCCATAGCTTTCTaGTTTGTGGTGAAAGGCCGG +
Preference number: 4 (lower is better)
Translates to: RAAFSATRDPFVPTRSQWLPIAF*FVVKGR
Trigger: CCGGCCTTTCACCACAAAGCAGAAAGCTATGGGCAA...CCACTGGCTCCTGGTTGGAACGAAAGGGTCTCTGGTTGCACTGAATGCAGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp GAGATAGGACGTCCTGGGCATGGCTGGGAAGCTGACATCTGTCTGACTTGGGAACACAGTGAATCACTTTaGAGACATAGGGAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: EIGRPGHGWEADICLTWEHSESL*RHREGS
Trigger: GGAGCCCTCCCTATGTCTGCAAAGTGATTCACTGTG...TTCCCAAGTCAGACAGATGTCAGCTTCCCAGCCATGCCCAGGACGTCCTATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp CTGTGCAAAACAAAGCAGGCTGCCTACCAGGAAAGTAAGTCTTCTCATTGGTTAAGCCACCCCCATCCCTaGCCCTACACAGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: LCKTKQAAYQESKSSHWLSHPHP*PYTGPE
Trigger: CTCTGGCCCTGTGTAGGGGCAGGGATGGGGGTGGCT...TAACCAATGAGAAGACTTACTTTCCTGGTAGGCAGCCTGCTTTGTTTTGCACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp GTTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTGTCAAACCAAACTACTaGGCAAACCAAACGTGCAAA +
Preference number: 4 (lower is better)
Translates to: VPWCHGSHISQAEALREGVKPNY*ANQTCK
Trigger: TTTGCACGTTTGGTTTGCGCAGTAGTTTGGTTTGAC...ACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp AGAGCTGCATTCAGTGCAACCAGAGACCCTTTCGTTCCAACCAGGAGCCAGTGGCAAGCGTGCAACACTTaGTACAGCTCACTGTCTCGA +
Preference number: 4 (lower is better)
Translates to: RAAFSATRDPFVPTRSQWQACNT*YSSLSR
Trigger: TCGAGACAGTGAGCTGTACCAAGTGTTGCACGCTTG...CCACTGGCTCCTGGTTGGAACGAAAGGGTCTCTGGTTGCACTGAATGCAGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp GAAGCCTCGCGCAAGCCTCGGGGGCTGAAATCACATGTGCAACATGAAGTCACTGATCTCGATTCCTTCTaGGCCTGTGATCCCCAAATC +
Preference number: 4 (lower is better)
Translates to: EASRKPRGLKSHVQHEVTDLDSF*ACDPQI
Trigger: GATTTGGGGATCACAGGCCCAGAAGGAATCGAGATC...AGTGACTTCATGTTGCACATGTGATTTCAGCCCCCGAGGCTTGCGCGAGGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp AGAGCTGCATTCAGTGCAACCAGAGACCCTTTCGTTCCAACCAGGAGCCAGTGGGCCACTCACTCCATGTaGGATCTTGGTGAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: RAAFSATRDPFVPTRSQWATHSM*DLGEVF
Trigger: GAAGACTTCACCAAGATCCCACATGGAGTGAGTGGC...CCACTGGCTCCTGGTTGGAACGAAAGGGTCTCTGGTTGCACTGAATGCAGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp GCGCAAACCAAACGTGCAAAACAAAACCATTTACACGCGCCTGGCACCAGCCTCCTTGTAGACAGTGTCTaGGAAGGACCTCAGGGGACA +
Preference number: 4 (lower is better)
Translates to: AQTKRAKQNHLHAPGTSLLVDSV*EGPQGT
Trigger: TGTCCCCTGAGGTCCTTCCCAGACACTGTCTACAAG...GAGGCTGGTGCCAGGCGCGTGTAAATGGTTTTGTTTTGCACGTTTGGTTTGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp CGGGGGCTGAAATCACATGTGCAACATGAAGTCACTTCCCACGGGGCAGACCAGCCTCTAGTGTTTCCATaGGAACTTCTGTGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: RGLKSHVQHEVTSHGADQPLVFP*ELLWGF
Trigger: AAAGCCCCACAGAAGTTCCCATGGAAACACTAGAGG...CTGGTCTGCCCCGTGGGAAGTGACTTCATGTTGCACATGTGATTTCAGCCCCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp AGAAGTTATAGGAAGCCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGACAAGGGCAGGCGGCTaGGTCACTTCCCAGATCACT +
Preference number: 4 (lower is better)
Translates to: RSYRKPCVCVCVCVCVCVTRAGG*VTSQIT
Trigger: AGTGATCTGGGAAGTGACCCAGCCGCCTGCCCTTGT...CACACACACACACACACACACACACACACACACGCACGGCTTCCTATAACTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp GCGCAAACCAAACGTGCAAAACAAAACCATTTACACGCGCCTGGCACCAGCCTCACGGTTAGCCCCCAATaGGTGACTAGTCTTGGCTCA +
Preference number: 4 (lower is better)
Translates to: AQTKRAKQNHLHAPGTSLTVSPQ*VTSLGS
Trigger: TGAGCCAAGACTAGTCACCCATTGGGGGCTAACCGT...GAGGCTGGTGCCAGGCGCGTGTAAATGGTTTTGTTTTGCACGTTTGGTTTGCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp AGAAGTTATAGGAAGCCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCGCATGGCCTACAGTaGACCACTCCAAGACGTGGT +
Preference number: 4 (lower is better)
Translates to: RSYRKPCVCVCVCVCVCVAHGLQ*TTPRRG
Trigger: ACCACGTCTTGGAGTGGTCCACTGTAGGCCATGCGC...CACACACACACACACACACACACACACACACACGCACGGCTTCCTATAACTTCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp CGGGGGCTGAAATCACATGTGCAACATGAAGTCACTTCCCACGGGGCAGACCAGTGGTTCTGTGGCTTCTaGGTCAGTATCAGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: RGLKSHVQHEVTSHGADQWFCGF*VSIRKA
Trigger: GGCTTTTCTGATACTGACCCAGAAGCCACAGAACCA...CTGGTCTGCCCCGTGGGAAGTGACTTCATGTTGCACATGTGATTTCAGCCCCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp GCGCAAACCAAACGTGCAAAACAAAACCATTTACACGCGCCTGGCACCAGCCTCACATTTACAGGGGAGTaGGGAAGTCACCTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: AQTKRAKQNHLHAPGTSLTFTGE*GSHLGA
Trigger: AGCACCCAGGTGACTTCCCCACTCCCCTGTAAATGT...GAGGCTGGTGCCAGGCGCGTGTAAATGGTTTTGTTTTGCACGTTTGGTTTGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp AGAGCTGCATTCAGTGCAACCAGAGACCCTTTCGTTCCAACCAGGAGCCAGTGGTTTTGCCTCAAACGGTaGCCAAAGCACAGGACCATG +
Preference number: 4 (lower is better)
Translates to: RAAFSATRDPFVPTRSQWFCLKR*PKHRTM
Trigger: CATGGTCCTGTGCTTTGGCCACCGTTTGAGGCAAAA...CCACTGGCTCCTGGTTGGAACGAAAGGGTCTCTGGTTGCACTGAATGCAGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp GCGCAAACCAAACGTGCAAAACAAAACCATTTACACGCGCCTGGCACCAGCCTCATGGTGATAACACGATaGGTGGCTTCAGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: AQTKRAKQNHLHAPGTSLMVITR*VASASS
Trigger: GCTGGAAGCTGAAGCCACTCATCGTGTTATCACCAT...GAGGCTGGTGCCAGGCGCGTGTAAATGGTTTTGTTTTGCACGTTTGGTTTGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp ACAGAGACCTACTGTGGACTCCTAGCACTACACACACGCACGCACACGCACACAAGATACTGGACACGTTaGCCAGGTAGATTGGACAGT +
Preference number: 4 (lower is better)
Translates to: TETYCGLLALHTRTHTHTRYWTR*PGRLDS
Trigger: ACTGTCCAATCTACCTGGTCAACGTGTCCAGTATCT...TGTGTGCGTGTGCGTGCGTGTGTGTAGTGCTAGGAGTCCACAGTAGGTCTCTGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp GCGCAAACCAAACGTGCAAAACAAAACCATTTACACGCGCCTGGCACCAGCCTCACAGTCTTAGCACCATaGCATTTACAGGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: AQTKRAKQNHLHAPGTSLTVLAP*HLQGSG
Trigger: CCCACTCCCCTGTAAATGTCATGGTGCTAAGACTGT...GAGGCTGGTGCCAGGCGCGTGTAAATGGTTTTGTTTTGCACGTTTGGTTTGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp GCGCAAACCAAACGTGCAAAACAAAACCATTTACACGCGCCTGGCACCAGCCTCCACAGTGAATCACTTTaGAGACATAGGGAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: AQTKRAKQNHLHAPGTSLHSESL*RHREGS
Trigger: GGAGCCCTCCCTATGTCTGCAAAGTGATTCACTGTG...GAGGCTGGTGCCAGGCGCGTGTAAATGGTTTTGTTTTGCACGTTTGGTTTGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp GAAGCCTCGCGCAAGCCTCGGGGGCTGAAATCACATGTGCAACATGAAGTCACTGACCAGTTTGAGAGCTaGATTCAGTGCAACCAGAGA +
Preference number: 4 (lower is better)
Translates to: EASRKPRGLKSHVQHEVTDQFES*IQCNQR
Trigger: TCTCTGGTTGCACTGAATGCAGCTCTCAAACTGGTC...AGTGACTTCATGTTGCACATGTGATTTCAGCCCCCGAGGCTTGCGCGAGGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp ACTGGAGGTGGAAGGAGACACCCGGCCTCTAGTGTTTCCATGGGAACTTCTGTGGGGCTGTTTAGTTTTTaGCTCAAACGGTGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: TGGGRRHPASSVSMGTSVGLFSF*LKRWPK
Trigger: CTTTGGCCACCGTTTGAGGCAAAAACTAAACAGCCC...CACAGAAGTTCCCATGGAAACACTAGAGGCCGGGTGTCTCCTTCCACCTCCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp AGAAGTTATAGGAAGCCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCACGCTGGCTGAGTTaGCAAGCATGTTCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: RSYRKPCVCVCVCVCVCVSRWLS*QACSPP
Trigger: CGGAGGAGAACATGCTTGCCAACTCAGCCAGCGTGA...CACACACACACACACACACACACACACACACACGCACGGCTTCCTATAACTTCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288699.11
CDS-3UTR CCA 90 bp AGAAGTTATAGGAAGCCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGACGAGTGCTGCCTTaGTCCCATGGTAGAAGTCGT +
Preference number: 4 (lower is better)
Translates to: RSYRKPCVCVCVCVCVCVRRVLP*SHGRSR
Trigger: ACGACTTCTACCATGGGACCAAGGCAGCACTCGTCG...CACACACACACACACACACACACACACACACACGCACGGCTTCCTATAACTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp AGAAGTTATAGGAAGCCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTAAGCCTGTCAGCGTaGCATGTGCAGTGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: RSYRKPCVCVCVCVCVCVVSLSA*HVQWWS
Trigger: AGACCACCACTGCACATGCCACGCTGACAGGCTTAC...CACACACACACACACACACACACACACACACACGCACGGCTTCCTATAACTTCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp CTGTGCAAAACAAAGCAGGCTGCCTACCAGGAAAGTAAGTCTTCTCATTGGTTAGGTGACGAAGCTGGCTaGAGCTCTGCACGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: LCKTKQAAYQESKSSHWLGDEAG*SSARGK
Trigger: CTTGCCCCGTGCAGAGCTCCAGCCAGCTTCGTCACC...TAACCAATGAGAAGACTTACTTTCCTGGTAGGCAGCCTGCTTTGTTTTGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp GAGATAGGACGTCCTGGGCATGGCTGGGAAGCTGACATCTGTCTGACTTGGGAATGGTTCTGTGGCTTCTaGGTCAGTATCAGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: EIGRPGHGWEADICLTWEWFCGF*VSIRKA
Trigger: GGCTTTTCTGATACTGACCCAGAAGCCACAGAACCA...TTCCCAAGTCAGACAGATGTCAGCTTCCCAGCCATGCCCAGGACGTCCTATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp GCGCAAACCAAACGTGCAAAACAAAACCATTTACACGCGCCTGGCACCAGCCTCAGATACTGGACACGTTaGCCAGGTAGATTGGACAGT +
Preference number: 4 (lower is better)
Translates to: AQTKRAKQNHLHAPGTSLRYWTR*PGRLDS
Trigger: ACTGTCCAATCTACCTGGTCAACGTGTCCAGTATCT...GAGGCTGGTGCCAGGCGCGTGTAAATGGTTTTGTTTTGCACGTTTGGTTTGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp GTTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTTATACGGAAGTGGTTTaGATACATGAAAAGCACTAC +
Preference number: 4 (lower is better)
Translates to: VPWCHGSHISQAEALREGYTEVV*IHEKHY
Trigger: GTAGTGCTTTTCATGTATTCAAACCACTTCCGTATA...ACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp GAAGCCTCGCGCAAGCCTCGGGGGCTGAAATCACATGTGCAACATGAAGTCACTGTCATGAGGACTAAGTaGGAGGTCATATACGGAAGT +
Preference number: 4 (lower is better)
Translates to: EASRKPRGLKSHVQHEVTVMRTK*EVIYGS
Trigger: ACTTCCGTATATGACCTCTCACTTAGTCCTCATGAC...AGTGACTTCATGTTGCACATGTGATTTCAGCCCCCGAGGCTTGCGCGAGGCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp CTGTGCAAAACAAAGCAGGCTGCCTACCAGGAAAGTAAGTCTTCTCATTGGTTAAGGCCCATGACCCAGTaGGGGCTGACAGGGATAGAG +
Preference number: 4 (lower is better)
Translates to: LCKTKQAAYQESKSSHWLRPMTQ*GLTGIE
Trigger: CTCTATCCCTGTCAGCCCTCACTGGGTCATGGGCCT...TAACCAATGAGAAGACTTACTTTCCTGGTAGGCAGCCTGCTTTGTTTTGCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp AGAAGTTATAGGAAGCCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGTCGTCTTGGGGTTaGCACAGTCTTAGCACCATG +
Preference number: 4 (lower is better)
Translates to: RSYRKPCVCVCVCVCVCVVSSWG*HSLSTM
Trigger: CATGGTGCTAAGACTGTGTCAACCCCAAGACGACAC...CACACACACACACACACACACACACACACACACGCACGGCTTCCTATAACTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp AGAAGTTATAGGAAGCCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATGCCTTTACCAAATaGCACTCGACCTGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: RSYRKPCVCVCVCVCVCVNAFTK*HSTCLR
Trigger: CCGGAGGCAGGTCGAGTGGCATTTGGTAAAGGCATT...CACACACACACACACACACACACACACACACACGCACGGCTTCCTATAACTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp AGAAGTTATAGGAAGCCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCACGCTATTCTCCTaGCTCAGCCTCCTCAGTAGC +
Preference number: 4 (lower is better)
Translates to: RSYRKPCVCVCVCVCVCVFTLFS*LSLLSS
Trigger: GCTACTGAGGAGGCTGAGGCAGGAGAATAGCGTGAA...CACACACACACACACACACACACACACACACACGCACGGCTTCCTATAACTTCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp GCGCAAACCAAACGTGCAAAACAAAACCATTTACACGCGCCTGGCACCAGCCTCGTTGACCAGGTAGATTaGACAGTGAGTCCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: AQTKRAKQNHLHAPGTSLVDQVD*TVSPVC
Trigger: GCAAACAGGACTCACTGTCCAATCTACCTGGTCAAC...GAGGCTGGTGCCAGGCGCGTGTAAATGGTTTTGTTTTGCACGTTTGGTTTGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp CTGTGCAAAACAAAGCAGGCTGCCTACCAGGAAAGTAAGTCTTCTCATTGGTTAAAGTCACCTGGGTGCTaGGGTGCTGGAGGCTCCATC +
Preference number: 4 (lower is better)
Translates to: LCKTKQAAYQESKSSHWLKSPGC*GAGGSI
Trigger: GATGGAGCCTCCAGCACCCCAGCACCCAGGTGACTT...TAACCAATGAGAAGACTTACTTTCCTGGTAGGCAGCCTGCTTTGTTTTGCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
3UTR CAA 72 bp GGTCAGTATCAGAAAAGCCCTCATCACGACATCGGCTaGACAGAGACCTACTGTGGACTCCTAGCACTACAC +
Preference number: 4 (lower is better)
Translates to: GQYQKSPHHDIG*TETYCGLLALH
Trigger: GTGTAGTGCTAGGAGTCCACAGTAGGTCTCTGTCAAGCCGATGTCGTGATGAGGGCTTTTCTGATACTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp CTGTGCAAAACAAAGCAGGCTGCCTACCAGGAAAGTAAGTCTTCTCATTGGTTATGGCCAGCAGGCTCATaGGGTAGGTTGAGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: LCKTKQAAYQESKSSHWLWPAGS*GRLRCW
Trigger: CCAACACCTCAACCTACCTCATGAGCCTGCTGGCCA...TAACCAATGAGAAGACTTACTTTCCTGGTAGGCAGCCTGCTTTGTTTTGCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp CTGTGCAAAACAAAGCAGGCTGCCTACCAGGAAAGTAAGTCTTCTCATTGGTTAATGGTCTCGATCTCCTaGCTCCATGATCCACCCGCC +
Preference number: 4 (lower is better)
Translates to: LCKTKQAAYQESKSSHWLMVSIS*LHDPPA
Trigger: GGCGGGTGGATCATGGAGTCAGGAGATCGAGACCAT...TAACCAATGAGAAGACTTACTTTCCTGGTAGGCAGCCTGCTTTGTTTTGCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp AGAAGTTATAGGAAGCCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGATCTCGATTCCTTCTaGGCCTGTGATCCCCAAATC +
Preference number: 4 (lower is better)
Translates to: RSYRKPCVCVCVCVCVCVDLDSF*ACDPQI
Trigger: GATTTGGGGATCACAGGCCCAGAAGGAATCGAGATC...CACACACACACACACACACACACACACACACACGCACGGCTTCCTATAACTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp AGAAGTTATAGGAAGCCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCCACTCACTCCATGTaGGATCTTGGTGAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: RSYRKPCVCVCVCVCVCVATHSM*DLGEVF
Trigger: GAAGACTTCACCAAGATCCCACATGGAGTGAGTGGC...CACACACACACACACACACACACACACACACACGCACGGCTTCCTATAACTTCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp CTGTGCAAAACAAAGCAGGCTGCCTACCAGGAAAGTAAGTCTTCTCATTGGTTATTCCTTCTGGGCCTGTaGTCCCCAAATCCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: LCKTKQAAYQESKSSHWLFLLGL*SPNPVP
Trigger: AGGCACTGGATTTGGGGATCACAGGCCCAGAAGGAA...TAACCAATGAGAAGACTTACTTTCCTGGTAGGCAGCCTGCTTTGTTTTGCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp CTGTGCAAAACAAAGCAGGCTGCCTACCAGGAAAGTAAGTCTTCTCATTGGTTAGTGGTGAAAGGCCGGTaGTCTGATGCCACGATGTTC +
Preference number: 4 (lower is better)
Translates to: LCKTKQAAYQESKSSHWLVVKGR*SDATMF
Trigger: GAACATCGTGGCATCAGATCACCGGCCTTTCACCAC...TAACCAATGAGAAGACTTACTTTCCTGGTAGGCAGCCTGCTTTGTTTTGCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp AGAAGTTATAGGAAGCCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGTGCTCCATTGTCATaGGGACTAAGTGAGAGGTCA +
Preference number: 4 (lower is better)
Translates to: RSYRKPCVCVCVCVCVCVSAPLS*GLSERS
Trigger: TGACCTCTCACTTAGTCCTCATGACAATGGAGCACT...CACACACACACACACACACACACACACACACACGCACGGCTTCCTATAACTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp CTGTGCAAAACAAAGCAGGCTGCCTACCAGGAAAGTAAGTCTTCTCATTGGTTAGTAAGCCTGTCAGCGTaGCATGTGCAGTGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: LCKTKQAAYQESKSSHWLVSLSA*HVQWWS
Trigger: AGACCACCACTGCACATGCCACGCTGACAGGCTTAC...TAACCAATGAGAAGACTTACTTTCCTGGTAGGCAGCCTGCTTTGTTTTGCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp AGAAGTTATAGGAAGCCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTCTAGTGTTTCCATaGGAACTTCTGTGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: RSYRKPCVCVCVCVCVCVPLVFP*ELLWGF
Trigger: AAAGCCCCACAGAAGTTCCCATGGAAACACTAGAGG...CACACACACACACACACACACACACACACACACGCACGGCTTCCTATAACTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp AGAGCTGCATTCAGTGCAACCAGAGACCCTTTCGTTCCAACCAGGAGCCAGTGGAGTAGCACAATTTTCTaGCAACTTAACCCCACAAAC +
Preference number: 4 (lower is better)
Translates to: RAAFSATRDPFVPTRSQWSSTIF*QLNPTN
Trigger: GTTTGTGGGGTTAAGTTGCCAGAAAATTGTGCTACT...CCACTGGCTCCTGGTTGGAACGAAAGGGTCTCTGGTTGCACTGAATGCAGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp CTGTGCAAAACAAAGCAGGCTGCCTACCAGGAAAGTAAGTCTTCTCATTGGTTAGCTCATGAGGTAGGTTaGGGTGTTGGTGTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: LCKTKQAAYQESKSSHWLAHEVG*GVGVQS
Trigger: AGACTGGACACCAACACCTCAACCTACCTCATGAGC...TAACCAATGAGAAGACTTACTTTCCTGGTAGGCAGCCTGCTTTGTTTTGCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp CTGTGCAAAACAAAGCAGGCTGCCTACCAGGAAAGTAAGTCTTCTCATTGGTTAGAAAGGCCGGTGATCTaGTGCCACGATGTTCAGAGT +
Preference number: 4 (lower is better)
Translates to: LCKTKQAAYQESKSSHWLERPVI*CHDVQS
Trigger: ACTCTGAACATCGTGGCATCAGATCACCGGCCTTTC...TAACCAATGAGAAGACTTACTTTCCTGGTAGGCAGCCTGCTTTGTTTTGCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp CTGTGCAAAACAAAGCAGGCTGCCTACCAGGAAAGTAAGTCTTCTCATTGGTTAACATGGTCATCGATCTaGGAGCCAGAGAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: LCKTKQAAYQESKSSHWLTWSSI*EPERLK
Trigger: CTTCAGCCTCTCTGGCTCTCAGATCGATGACCATGT...TAACCAATGAGAAGACTTACTTTCCTGGTAGGCAGCCTGCTTTGTTTTGCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp AGAGCTGCATTCAGTGCAACCAGAGACCCTTTCGTTCCAACCAGGAGCCAGTGGTATACGGAAGTGGTTTaGATACATGAAAAGCACTAC +
Preference number: 4 (lower is better)
Translates to: RAAFSATRDPFVPTRSQWYTEVV*IHEKHY
Trigger: GTAGTGCTTTTCATGTATTCAAACCACTTCCGTATA...CCACTGGCTCCTGGTTGGAACGAAAGGGTCTCTGGTTGCACTGAATGCAGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp AGAAGTTATAGGAAGCCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGTACAAGACCAGTTTaGGAGCTGCATTCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: RSYRKPCVCVCVCVCVCVSTRPV*ELHSVQ
Trigger: TTGCACTGAATGCAGCTCTCAAACTGGTCTTGTACT...CACACACACACACACACACACACACACACACACGCACGGCTTCCTATAACTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp GAGATAGGACGTCCTGGGCATGGCTGGGAAGCTGACATCTGTCTGACTTGGGAAGGTCATATACGGAAGTaGTTTGAATACATGAAAAGC +
Preference number: 4 (lower is better)
Translates to: EIGRPGHGWEADICLTWEGHIRK*FEYMKS
Trigger: GCTTTTCATGTATTCAAACCACTTCCGTATATGACC...TTCCCAAGTCAGACAGATGTCAGCTTCCCAGCCATGCCCAGGACGTCCTATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp CTGTGCAAAACAAAGCAGGCTGCCTACCAGGAAAGTAAGTCTTCTCATTGGTTAATGGTGATAACACGATaGGTGGCTTCAGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: LCKTKQAAYQESKSSHWLMVITR*VASASS
Trigger: GCTGGAAGCTGAAGCCACTCATCGTGTTATCACCAT...TAACCAATGAGAAGACTTACTTTCCTGGTAGGCAGCCTGCTTTGTTTTGCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR TCA 90 bp CTGTGCAAAACAAAGCAGGCTGCCTACCAGGAAAGTAAGTCTTCTCATTGGTTAACAGTCTTAGCACCATaGCATTTACAGGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: LCKTKQAAYQESKSSHWLTVLAP*HLQGSG
Trigger: CCCACTCCCCTGTAAATGTCATGGTGCTAAGACTGT...TAACCAATGAGAAGACTTACTTTCCTGGTAGGCAGCCTGCTTTGTTTTGCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp CTGTGCAAAACAAAGCAGGCTGCCTACCAGGAAAGTAAGTCTTCTCATTGGTTATTTTGCCTCAAACGGTaGCCAAAGCACAGGACCATG +
Preference number: 4 (lower is better)
Translates to: LCKTKQAAYQESKSSHWLFCLKR*PKHRTM
Trigger: CATGGTCCTGTGCTTTGGCCACCGTTTGAGGCAAAA...TAACCAATGAGAAGACTTACTTTCCTGGTAGGCAGCCTGCTTTGTTTTGCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp CTGTGCAAAACAAAGCAGGCTGCCTACCAGGAAAGTAAGTCTTCTCATTGGTTAGTTGACCAGGTAGATTaGACAGTGAGTCCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: LCKTKQAAYQESKSSHWLVDQVD*TVSPVC
Trigger: GCAAACAGGACTCACTGTCCAATCTACCTGGTCAAC...TAACCAATGAGAAGACTTACTTTCCTGGTAGGCAGCCTGCTTTGTTTTGCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CCA 90 bp AGAAGTTATAGGAAGCCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGTCATATACGGAAGTaGTTTGAATACATGAAAAGC +
Preference number: 4 (lower is better)
Translates to: RSYRKPCVCVCVCVCVCVGHIRK*FEYMKS
Trigger: GCTTTTCATGTATTCAAACCACTTCCGTATATGACC...CACACACACACACACACACACACACACACACACGCACGGCTTCCTATAACTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp CTGTGCAAAACAAAGCAGGCTGCCTACCAGGAAAGTAAGTCTTCTCATTGGTTAACAGTGAGTCCTGTTTaGAATGGTGATAACACGATG +
Preference number: 4 (lower is better)
Translates to: LCKTKQAAYQESKSSHWLTVSPV*NGDNTM
Trigger: CATCGTGTTATCACCATTGCAAACAGGACTCACTGT...TAACCAATGAGAAGACTTACTTTCCTGGTAGGCAGCCTGCTTTGTTTTGCACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR GCA 90 bp CTGTGCAAAACAAAGCAGGCTGCCTACCAGGAAAGTAAGTCTTCTCATTGGTTAAGTTTAATACAAACCTaGACCAGAACACAACGTGTC +
Preference number: 4 (lower is better)
Translates to: LCKTKQAAYQESKSSHWLSLIQT*TRTQRV
Trigger: GACACGTTGTGTTCTGGTGCAGGTTTGTATTAAACT...TAACCAATGAGAAGACTTACTTTCCTGGTAGGCAGCCTGCTTTGTTTTGCACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CAA 90 bp AGGGCCAGGGCCTCCCGCAGCCCAGAAGACTGCAGGCGGGGAAAAGAGAGGCCTAGGGCCAGAGGTGGGTaGGGGGAGATAGGACGTCCT +
Preference number: 5 (lower is better)
Translates to: RARASRSPEDCRRGKERPRARGG*GEIGRP
Trigger: AGGACGTCCTATCTCCCCCAACCCACCTCTGGCCCT...AGGCCTCTCTTTTCCCCGCCTGCAGTCTTCTGGGCTGCGGGAGGCCCTGGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CAA 90 bp AGGGCCAGGGCCTCCCGCAGCCCAGAAGACTGCAGGCGGGGAAAAGAGAGGCCTCATGGACGCGGGCGATaGCCCCAATGTCCTTGCAAG +
Preference number: 5 (lower is better)
Translates to: RARASRSPEDCRRGKERPHGRGR*PQCPCK
Trigger: CTTGCAAGGACATTGGGGCAATCGCCCGCGTCCATG...AGGCCTCTCTTTTCCCCGCCTGCAGTCTTCTGGGCTGCGGGAGGCCCTGGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CAA 90 bp AGCTCTGCACGGGGCAAGGAGTGCATGGTGGGGGCTGACCGCTCATTTGGCTCCGTGGCATCAATCACCTaGGCCCCGCCAGGGATCATG +
Preference number: 5 (lower is better)
Translates to: SSARGKECMVGADRSFGSVASIT*APPGIM
Trigger: CATGATCCCTGGCGGGGCCAAGGTGATTGATGCCAC...GGAGCCAAATGAGCGGTCAGCCCCCACCATGCACTCCTTGCCCCGTGCAGAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CAA 90 bp GCTTTCCTAGCCCAAGCAAGGATGCTCTGCCCAGCTGGCCACCACCGCTGCTGCGTGGCATCAATCACCTaGGCCCCGCCAGGGATCATG +
Preference number: 5 (lower is better)
Translates to: AFLAQARMLCPAGHHRCCVASIT*APPGIM
Trigger: CATGATCCCTGGCGGGGCCAAGGTGATTGATGCCAC...GCAGCAGCGGTGGTGGCCAGCTGGGCAGAGCATCCTTGCTTGGGCTAGGAAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CAA 90 bp TTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTACTCAGGGGACAGAACTaGCCGGTGCCCTCGGCGCAC +
Preference number: 5 (lower is better)
Translates to: FPGATGHTSLRRRHSEKVLRGQN*PVPSAH
Trigger: GTGCGCCGAGGGCACCGGCAAGTTCTGTCCCCTGAG...TACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CAA 90 bp TTCCAATGGCTGCCACTTGCCATGAGCCCCTTCGCCACCTCTGCTCCCCGGCTGCTGCTGCTGGGCTCTTaGACATCTGCCCAAGGCCCA +
Preference number: 5 (lower is better)
Translates to: FQWLPLAMSPFATSAPRLLLLGS*TSAQGP
Trigger: TGGGCCTTGGGCAGATGTCAAAGAGCCCAGCAGCAG...CAGCCGGGGAGCAGAGGTGGCGAAGGGGCTCATGGCAAGTGGCAGCCATTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CAA 90 bp GCTTTCCTAGCCCAAGCAAGGATGCTCTGCCCAGCTGGCCACCACCGCTGCTGCACCACCTTGCCTCCCTaGATGAGGATCCTCACGCTG +
Preference number: 5 (lower is better)
Translates to: AFLAQARMLCPAGHHRCCTTLPP*MRILTL
Trigger: CAGCGTGAGGATCCTCATCAAGGGAGGCAAGGTGGT...GCAGCAGCGGTGGTGGCCAGCTGGGCAGAGCATCCTTGCTTGGGCTAGGAAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CAA 90 bp AGGGCCAGGGCCTCCCGCAGCCCAGAAGACTGCAGGCGGGGAAAAGAGAGGCCTCATCACGACATCGGCTaGACAGAGACCTACTGTGGA +
Preference number: 5 (lower is better)
Translates to: RARASRSPEDCRRGKERPHHDIG*TETYCG
Trigger: TCCACAGTAGGTCTCTGTCAAGCCGATGTCGTGATG...AGGCCTCTCTTTTCCCCGCCTGCAGTCTTCTGGGCTGCGGGAGGCCCTGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS CCA 90 bp CCGCGTGGGACCAGTCCTGGTGGTAGTAGTGTAAGCCTGTCAGCGTaGCATGTGCAGTGGTGGTCTCCGCCAGCACAACCTTCCCTTGCA +
Preference number: 5 (lower is better)
Translates to: PRGTSPGGSSVSLSA*HVQWWSPPAQPSLA
Trigger: TGCAAGGGAAGGTTGTGCTGGCGGAGACCACCACTGCACATGCCACGCTGACAGGCTTACACTACTACCACCAGGACTGGTCCCACGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288699.11
ENST00000401478.5
ENST00000614712.4
CDS-3UTR CAA 90 bp GCTTTCCTAGCCCAAGCAAGGATGCTCTGCCCAGCTGGCCACCACCGCTGCTGCGGAATAATGCGGCCCTaGCGGGGATACAGGTTCAGA +
Preference number: 5 (lower is better)
Translates to: AFLAQARMLCPAGHHRCCGIMRP*RGYRFR
Trigger: TCTGAACCTGTATCCCCGCAAGGGCCGCATTATTCC...GCAGCAGCGGTGGTGGCCAGCTGGGCAGAGCATCCTTGCTTGGGCTAGGAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CAA 90 bp AGGGCCAGGGCCTCCCGCAGCCCAGAAGACTGCAGGCGGGGAAAAGAGAGGCCTATGTTCTCATACAGGTaGAAGTCTCCTCCCTGGACC +
Preference number: 5 (lower is better)
Translates to: RARASRSPEDCRRGKERPMFSYR*KSPPWT
Trigger: GGTCCAGGGAGGAGACTTCAACCTGTATGAGAACAT...AGGCCTCTCTTTTCCCCGCCTGCAGTCTTCTGGGCTGCGGGAGGCCCTGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CAA 90 bp ACAGAGACCTACTGTGGACTCCTAGCACTACACACACGCACGCACACGCACACACTCAGGGGACAGAACTaGCCGGTGCCCTCGGCGCAC +
Preference number: 5 (lower is better)
Translates to: TETYCGLLALHTRTHTHTLRGQN*PVPSAH
Trigger: GTGCGCCGAGGGCACCGGCAAGTTCTGTCCCCTGAG...TGTGTGCGTGTGCGTGCGTGTGTGTAGTGCTAGGAGTCCACAGTAGGTCTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS CCA 90 bp GGCTTCAGCTTCCAGCTCCTCTGGACGGCTGATCTCGATTCCTTCTaGGCCTGTGATCCCCAAATCCAGTGCCTCCTTAGCACCCTCGGC +
Preference number: 5 (lower is better)
Translates to: GFSFQLLWTADLDSF*ACDPQIQCLLSTLG
Trigger: GCCGAGGGTGCTAAGGAGGCACTGGATTTGGGGATCACAGGCCCAGAAGGAATCGAGATCAGCCGTCCAGAGGAGCTGGAAGCTGAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288699.11
ENST00000401478.5
ENST00000614712.4
CDS-3UTR CAA 90 bp ACAGAGACCTACTGTGGACTCCTAGCACTACACACACGCACGCACACGCACACAACAAGGGAGGTCTCCTaGTCGGGCAGGACGTGGCCG +
Preference number: 5 (lower is better)
Translates to: TETYCGLLALHTRTHTHTTREVS*SGRTWP
Trigger: CGGCCACGTCCTGCCCGACAAGGAGACCTCCCTTGT...TGTGTGCGTGTGCGTGCGTGTGTGTAGTGCTAGGAGTCCACAGTAGGTCTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CAA 90 bp GCTTTCCTAGCCCAAGCAAGGATGCTCTGCCCAGCTGGCCACCACCGCTGCTGCATTTCTGCTTTCACCTaGGGTGCCCACCAGGTGATC +
Preference number: 5 (lower is better)
Translates to: AFLAQARMLCPAGHHRCCISAFT*GAHQVI
Trigger: GATCACCTGGTGGGCACCCAAGGTGAAAGCAGAAAT...GCAGCAGCGGTGGTGGCCAGCTGGGCAGAGCATCCTTGCTTGGGCTAGGAAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CAA 90 bp CCTGGTGCCGACCACGGGAGATCACGGCACCTGAGCAGCAATGCGGGTTCGACAAACATCTGGAACGAGTaGACACCCTTCTCCCTCACC +
Preference number: 5 (lower is better)
Translates to: PGADHGRSRHLSSNAGSTNIWNE*TPFSLT
Trigger: GGTGAGGGAGAAGGGTGTCAACTCGTTCCAGATGTT...TGTCGAACCCGCATTGCTGCTCAGGTGCCGTGATCTCCCGTGGTCGGCACCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CAA 90 bp CCTGGTGCCGACCACGGGAGATCACGGCACCTGAGCAGCAATGCGGGTTCGACAATTGCCCCAATGTCCTaGCAAGCGTGCAACACTTGG +
Preference number: 5 (lower is better)
Translates to: PGADHGRSRHLSSNAGSTIAPMS*QACNTW
Trigger: CCAAGTGTTGCACGCTTGCAAGGACATTGGGGCAAT...TGTCGAACCCGCATTGCTGCTCAGGTGCCGTGATCTCCCGTGGTCGGCACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CAA 90 bp GCTTTCCTAGCCCAAGCAAGGATGCTCTGCCCAGCTGGCCACCACCGCTGCTGCCAGCACAACCTTCCCTaGCATCTTAGCAGCTGCGAT +
Preference number: 5 (lower is better)
Translates to: AFLAQARMLCPAGHHRCCQHNLP*HLSSCD
Trigger: ATCGCAGCTGCTAAGATGCAAGGGAAGGTTGTGCTG...GCAGCAGCGGTGGTGGCCAGCTGGGCAGAGCATCCTTGCTTGGGCTAGGAAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CAA 90 bp CCTGGTGCCGACCACGGGAGATCACGGCACCTGAGCAGCAATGCGGGTTCGACAACTCCATGTGGGATCTaGGTGAAGTCTTCCTTGCCC +
Preference number: 5 (lower is better)
Translates to: PGADHGRSRHLSSNAGSTTPCGI*VKSSLP
Trigger: GGGCAAGGAAGACTTCACCAAGATCCCACATGGAGT...TGTCGAACCCGCATTGCTGCTCAGGTGCCGTGATCTCCCGTGGTCGGCACCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS TCA 90 bp CTGCCTTGGTCCCATGGTAGAAGTCGTCCACGCACGTGGCATTCATaGAGGTCTGGTGGAAGTGGGTGCTGGTGTCGATGCCACCAGGGA +
Preference number: 5 (lower is better)
Translates to: LPWSHGRSRPRTWHS*RSGGSGCWCRCHQG
Trigger: TCCCTGGTGGCATCGACACCAGCACCCACTTCCACCAGACCTTCATGAATGCCACGTGCGTGGACGACTTCTACCATGGGACCAAGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288699.11
ENST00000401478.5
ENST00000431402.5
ENST00000434719.1
ENST00000450961.5
ENST00000614712.4
CDS GCA 90 bp AATGTCTTTGGCCAAACCCGTGGTGAAGATGCATCGCTCTTCCTGTaGGGTAGGCTGGGCCTTCTCTGGGCCAAAGAGGCTGCTCTGGCC +
Preference number: 5 (lower is better)
Translates to: NVFGQTRGEDASLFL*GRLGLLWAKEAALA
Trigger: GGCCAGAGCAGCCTCTTTGGCCCAGAGAAGGCCCAGCCTACCGCACAGGAAGAGCGATGCATCTTCACCACGGGTTTGGCCAAAGACATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484882.1
CDS-3UTR CAA 90 bp GTTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTGGAATAATGCGGCCCTaGCGGGGATACAGGTTCAGA +
Preference number: 5 (lower is better)
Translates to: VPWCHGSHISQAEALREGGIMRP*RGYRFR
Trigger: TCTGAACCTGTATCCCCGCAAGGGCCGCATTATTCC...ACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CAA 90 bp ACTGGAGGTGGAAGGAGACACCCGGCCTCTAGTGTTTCCATGGGAACTTCTGTGAGGGCCAGAGGTGGGTaGGGGGAGATAGGACGTCCT +
Preference number: 5 (lower is better)
Translates to: TGGGRRHPASSVSMGTSVRARGG*GEIGRP
Trigger: AGGACGTCCTATCTCCCCCAACCCACCTCTGGCCCT...CACAGAAGTTCCCATGGAAACACTAGAGGCCGGGTGTCTCCTTCCACCTCCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS TCA 90 bp CCACGGGGGACCTGGCAGGGCTTATCAGTCTCAGCTCCTGCCCAGTaGCTAATGTCTTTGGCCAAACCCGTGGTGAAGATGCATCGCTCT +
Preference number: 5 (lower is better)
Translates to: PRGTWQGLSVSAPAQ*LMSLAKPVVKMHRS
Trigger: AGAGCGATGCATCTTCACCACGGGTTTGGCCAAAGACATTAGTCACTGGGCAGGAGCTGAGACTGATAAGCCCTGCCAGGTCCCCCGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484882.1
CDS GCA 90 bp ACCCTCGGCCACAAGCTCCCCATTTTCAGCATGGACGCGGGCGATTaGCCCAATGTCCTTGCAAGCGTGCAACACTTGGTACAGCTCACT +
Preference number: 5 (lower is better)
Translates to: TLGHKLPIFSMDAGD*PNVLASVQHLVQLT
Trigger: AGTGAGCTGTACCAAGTGTTGCACGCTTGCAAGGACATTGGGGCAATCGCCCGCGTCCATGCTGAAAATGGGGAGCTTGTGGCCGAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288699.11
ENST00000401478.5
ENST00000614712.4
CDS GCA 90 bp GCTGTCTCCACGGGGGACCTGGCAGGGCTTATCAGTCTCAGCTCCTaGCCAGTGACTAATGTCTTTGGCCAAACCCGTGGTGAAGATGCA +
Preference number: 5 (lower is better)
Translates to: AVSTGDLAGLISLSS*PVTNVFGQTRGEDA
Trigger: TGCATCTTCACCACGGGTTTGGCCAAAGACATTAGTCACTGGGCAGGAGCTGAGACTGATAAGCCCTGCCAGGTCCCCCGTGGAGACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484882.1
CDS-3UTR CAA 90 bp GTTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTAACATCTGGAACGAGTaGACACCCTTCTCCCTCACC +
Preference number: 5 (lower is better)
Translates to: VPWCHGSHISQAEALREGNIWNE*TPFSLT
Trigger: GGTGAGGGAGAAGGGTGTCAACTCGTTCCAGATGTT...ACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CAA 90 bp GAAGCCTCGCGCAAGCCTCGGGGGCTGAAATCACATGTGCAACATGAAGTCACTCATGGACGCGGGCGATaGCCCCAATGTCCTTGCAAG +
Preference number: 5 (lower is better)
Translates to: EASRKPRGLKSHVQHEVTHGRGR*PQCPCK
Trigger: CTTGCAAGGACATTGGGGCAATCGCCCGCGTCCATG...AGTGACTTCATGTTGCACATGTGATTTCAGCCCCCGAGGCTTGCGCGAGGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CAA 90 bp GTTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTCAGCACAACCTTCCCTaGCATCTTAGCAGCTGCGAT +
Preference number: 5 (lower is better)
Translates to: VPWCHGSHISQAEALREGQHNLP*HLSSCD
Trigger: ATCGCAGCTGCTAAGATGCAAGGGAAGGTTGTGCTG...ACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CAA 90 bp AGCTCTGCACGGGGCAAGGAGTGCATGGTGGGGGCTGACCGCTCATTTGGCTCCAAGTGCCTGTTAGAGTaGGCTCGAAGCACAGTGAAT +
Preference number: 5 (lower is better)
Translates to: SSARGKECMVGADRSFGSKCLLE*ARSTVN
Trigger: ATTCACTGTGCTTCGAGCCAACTCTAACAGGCACTT...GGAGCCAAATGAGCGGTCAGCCCCCACCATGCACTCCTTGCCCCGTGCAGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CAA 90 bp GAAGCCTCGCGCAAGCCTCGGGGGCTGAAATCACATGTGCAACATGAAGTCACTCTCACGCTGGCTGAGTaGGCAAGCATGTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: EASRKPRGLKSHVQHEVTLTLAE*ASMFSS
Trigger: GGAGGAGAACATGCTTGCCAACTCAGCCAGCGTGAG...AGTGACTTCATGTTGCACATGTGATTTCAGCCCCCGAGGCTTGCGCGAGGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288699.11
CDS-3UTR CAA 90 bp TTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTATCATCGTTCACCACCTaGCCTCCCTTGATGAGGATC +
Preference number: 5 (lower is better)
Translates to: FPGATGHTSLRRRHSEKVSSFTT*PPLMRI
Trigger: GATCCTCATCAAGGGAGGCAAGGTGGTGAACGATGA...TACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CAA 90 bp AGAAGTTATAGGAAGCCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGACAAGGGAGGTCTCCTaGTCGGGCAGGACGTGGCCG +
Preference number: 5 (lower is better)
Translates to: RSYRKPCVCVCVCVCVCVTREVS*SGRTWP
Trigger: CGGCCACGTCCTGCCCGACAAGGAGACCTCCCTTGT...CACACACACACACACACACACACACACACACACGCACGGCTTCCTATAACTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CAA 90 bp TTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTAATGTTCAGAGTGTCATaGGCCAGCAGGCTCATGAGG +
Preference number: 5 (lower is better)
Translates to: FPGATGHTSLRRRHSEKVMFRVS*ASRLMR
Trigger: CCTCATGAGCCTGCTGGCCAATGACACTCTGAACAT...TACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CAA 90 bp TTCCAATGGCTGCCACTTGCCATGAGCCCCTTCGCCACCTCTGCTCCCCGGCTGTTGGTGAAGTCTTCCTaGCCCATAGCTTTCTGCTTT +
Preference number: 5 (lower is better)
Translates to: FQWLPLAMSPFATSAPRLLVKSS*PIAFCF
Trigger: AAAGCAGAAAGCTATGGGCAAGGAAGACTTCACCAA...CAGCCGGGGAGCAGAGGTGGCGAAGGGGCTCATGGCAAGTGGCAGCCATTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CAA 90 bp TTCCAATGGCTGCCACTTGCCATGAGCCCCTTCGCCACCTCTGCTCCCCGGCTGGAGGAGGCCTTTACTTaGAAACCACATCTGCTAAAG +
Preference number: 5 (lower is better)
Translates to: FQWLPLAMSPFATSAPRLEEAFT*KPHLLK
Trigger: CTTTAGCAGATGTGGTTTCAAAGTAAAGGCCTCCTC...CAGCCGGGGAGCAGAGGTGGCGAAGGGGCTCATGGCAAGTGGCAGCCATTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CAA 90 bp GCTTTCCTAGCCCAAGCAAGGATGCTCTGCCCAGCTGGCCACCACCGCTGCTGCGAGGAGGCCTTTACTTaGAAACCACATCTGCTAAAG +
Preference number: 5 (lower is better)
Translates to: AFLAQARMLCPAGHHRCCEEAFT*KPHLLK
Trigger: CTTTAGCAGATGTGGTTTCAAAGTAAAGGCCTCCTC...GCAGCAGCGGTGGTGGCCAGCTGGGCAGAGCATCCTTGCTTGGGCTAGGAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CAA 90 bp AGCTCTGCACGGGGCAAGGAGTGCATGGTGGGGGCTGACCGCTCATTTGGCTCCAAGTACAAGACCAGTTaGAGAGCTGCATTCAGTGCA +
Preference number: 5 (lower is better)
Translates to: SSARGKECMVGADRSFGSKYKTS*RAAFSA
Trigger: TGCACTGAATGCAGCTCTCAAACTGGTCTTGTACTT...GGAGCCAAATGAGCGGTCAGCCCCCACCATGCACTCCTTGCCCCGTGCAGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CAA 90 bp AGAGCTGCATTCAGTGCAACCAGAGACCCTTTCGTTCCAACCAGGAGCCAGTGGGCAGCTGGAGGGGGTTaGGGTTTCCTTGTGGTTCTG +
Preference number: 5 (lower is better)
Translates to: RAAFSATRDPFVPTRSQWAAGGG*GFLVVL
Trigger: CAGAACCACAAGGAAACCCAAACCCCCTCCAGCTGC...CCACTGGCTCCTGGTTGGAACGAAAGGGTCTCTGGTTGCACTGAATGCAGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CAA 90 bp ACTGGAGGTGGAAGGAGACACCCGGCCTCTAGTGTTTCCATGGGAACTTCTGTGGCAAGCGTGCAACACTaGGTACAGCTCACTGTCTCG +
Preference number: 5 (lower is better)
Translates to: TGGGRRHPASSVSMGTSVASVQH*VQLTVS
Trigger: CGAGACAGTGAGCTGTACCAAGTGTTGCACGCTTGC...CACAGAAGTTCCCATGGAAACACTAGAGGCCGGGTGTCTCCTTCCACCTCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CAA 90 bp AGCTCTGCACGGGGCAAGGAGTGCATGGTGGGGGCTGACCGCTCATTTGGCTCCCGCTCATTTGGCTCCTaGAATCTCTTTCTGATTTCT +
Preference number: 5 (lower is better)
Translates to: SSARGKECMVGADRSFGSRSFGS*NLFLIS
Trigger: AGAAATCAGAAAGAGATTCAAGGAGCCAAATGAGCG...GGAGCCAAATGAGCGGTCAGCCCCCACCATGCACTCCTTGCCCCGTGCAGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CAA 90 bp GCGCAAACCAAACGTGCAAAACAAAACCATTTACACGCGCCTGGCACCAGCCTCGCAGCTGGAGGGGGTTaGGGTTTCCTTGTGGTTCTG +
Preference number: 5 (lower is better)
Translates to: AQTKRAKQNHLHAPGTSLAAGGG*GFLVVL
Trigger: CAGAACCACAAGGAAACCCAAACCCCCTCCAGCTGC...GAGGCTGGTGCCAGGCGCGTGTAAATGGTTTTGTTTTGCACGTTTGGTTTGCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS GCA 90 bp TTTTCAGCATGGACGCGGGCGATTGCCCCAATGTCCTTGCAAGCGTaGAACACTTGGTACAGCTCACTGTCTCGAAGCATGTACAGGTCC +
Preference number: 5 (lower is better)
Translates to: FSAWTRAIAPMSLQA*NTWYSSLSRSMYRS
Trigger: GGACCTGTACATGCTTCGAGACAGTGAGCTGTACCAAGTGTTGCACGCTTGCAAGGACATTGGGGCAATCGCCCGCGTCCATGCTGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288699.11
ENST00000401478.5
ENST00000614712.4
CDS CCA 90 bp CTCCCAGATGACGCTCATGCGGTCCTGCACGCCACTCACTCCATGTaGGATCTTGGTGAAGTCTTCCTTGCCCATAGCTTTCTGCTTTGT +
Preference number: 5 (lower is better)
Translates to: LPDDAHAVLHATHSM*DLGEVFLAHSFLLC
Trigger: ACAAAGCAGAAAGCTATGGGCAAGGAAGACTTCACCAAGATCCCACATGGAGTGAGTGGCGTGCAGGACCGCATGAGCGTCATCTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288699.11
ENST00000401478.5
ENST00000484882.1
ENST00000614712.4
CDS-3UTR CAA 90 bp GCGCAAACCAAACGTGCAAAACAAAACCATTTACACGCGCCTGGCACCAGCCTCGCAAGCGTGCAACACTaGGTACAGCTCACTGTCTCG +
Preference number: 5 (lower is better)
Translates to: AQTKRAKQNHLHAPGTSLASVQH*VQLTVS
Trigger: CGAGACAGTGAGCTGTACCAAGTGTTGCACGCTTGC...GAGGCTGGTGCCAGGCGCGTGTAAATGGTTTTGTTTTGCACGTTTGGTTTGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CAA 90 bp GAAGCCTCGCGCAAGCCTCGGGGGCTGAAATCACATGTGCAACATGAAGTCACTATTGCCCCAATGTCCTaGCAAGCGTGCAACACTTGG +
Preference number: 5 (lower is better)
Translates to: EASRKPRGLKSHVQHEVTIAPMS*QACNTW
Trigger: CCAAGTGTTGCACGCTTGCAAGGACATTGGGGCAAT...AGTGACTTCATGTTGCACATGTGATTTCAGCCCCCGAGGCTTGCGCGAGGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CAA 90 bp ACAGAGACCTACTGTGGACTCCTAGCACTACACACACGCACGCACACGCACACAATGTTCAGAGTGTCATaGGCCAGCAGGCTCATGAGG +
Preference number: 5 (lower is better)
Translates to: TETYCGLLALHTRTHTHTMFRVS*ASRLMR
Trigger: CCTCATGAGCCTGCTGGCCAATGACACTCTGAACAT...TGTGTGCGTGTGCGTGCGTGTGTGTAGTGCTAGGAGTCCACAGTAGGTCTCTGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CAA 90 bp AGAGCTGCATTCAGTGCAACCAGAGACCCTTTCGTTCCAACCAGGAGCCAGTGGACTCCATGTGGGATCTaGGTGAAGTCTTCCTTGCCC +
Preference number: 5 (lower is better)
Translates to: RAAFSATRDPFVPTRSQWTPCGI*VKSSLP
Trigger: GGGCAAGGAAGACTTCACCAAGATCCCACATGGAGT...CCACTGGCTCCTGGTTGGAACGAAAGGGTCTCTGGTTGCACTGAATGCAGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CAA 90 bp ACAGAGACCTACTGTGGACTCCTAGCACTACACACACGCACGCACACGCACACAAGAAGCTTAGCTGCGTaGGAACTGGTAACGGCCACA +
Preference number: 5 (lower is better)
Translates to: TETYCGLLALHTRTHTHTRSLAA*ELVTAT
Trigger: TGTGGCCGTTACCAGTTCCAACGCAGCTAAGCTTCT...TGTGTGCGTGTGCGTGCGTGTGTGTAGTGCTAGGAGTCCACAGTAGGTCTCTGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CAA 90 bp GAAGCCTCGCGCAAGCCTCGGGGGCTGAAATCACATGTGCAACATGAAGTCACTAGAAGCTTAGCTGCGTaGGAACTGGTAACGGCCACA +
Preference number: 5 (lower is better)
Translates to: EASRKPRGLKSHVQHEVTRSLAA*ELVTAT
Trigger: TGTGGCCGTTACCAGTTCCAACGCAGCTAAGCTTCT...AGTGACTTCATGTTGCACATGTGATTTCAGCCCCCGAGGCTTGCGCGAGGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CAA 90 bp AGAAGTTATAGGAAGCCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTGCTGCTGGGCTCTTaGACATCTGCCCAAGGCCCA +
Preference number: 5 (lower is better)
Translates to: RSYRKPCVCVCVCVCVCVLLLGS*TSAQGP
Trigger: TGGGCCTTGGGCAGATGTCAAAGAGCCCAGCAGCAG...CACACACACACACACACACACACACACACACACGCACGGCTTCCTATAACTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CAA 90 bp GCGCAAACCAAACGTGCAAAACAAAACCATTTACACGCGCCTGGCACCAGCCTCATTTCTGCTTTCACCTaGGGTGCCCACCAGGTGATC +
Preference number: 5 (lower is better)
Translates to: AQTKRAKQNHLHAPGTSLISAFT*GAHQVI
Trigger: GATCACCTGGTGGGCACCCAAGGTGAAAGCAGAAAT...GAGGCTGGTGCCAGGCGCGTGTAAATGGTTTTGTTTTGCACGTTTGGTTTGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CAA 90 bp TTCCCTGGTGCCACGGGTCACACATCTCTCAGGCGGAGGCACTCAGAGAAGGTATTGGTGAAGTCTTCCTaGCCCATAGCTTTCTGCTTT +
Preference number: 5 (lower is better)
Translates to: FPGATGHTSLRRRHSEKVLVKSS*PIAFCF
Trigger: AAAGCAGAAAGCTATGGGCAAGGAAGACTTCACCAA...TACCTTCTCTGAGTGCCTCCGCCTGAGAGATGTGTGACCCGTGGCACCAGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CAA 90 bp AGAGCTGCATTCAGTGCAACCAGAGACCCTTTCGTTCCAACCAGGAGCCAGTGGGAGCTGAAGCTCGCTTaGGAACATGGTCATCGATCT +
Preference number: 5 (lower is better)
Translates to: RAAFSATRDPFVPTRSQWELKLA*EHGHRS
Trigger: AGATCGATGACCATGTTCCAAAGCGAGCTTCAGCTC...CCACTGGCTCCTGGTTGGAACGAAAGGGTCTCTGGTTGCACTGAATGCAGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CAA 90 bp GCGCAAACCAAACGTGCAAAACAAAACCATTTACACGCGCCTGGCACCAGCCTCCATCACGACATCGGCTaGACAGAGACCTACTGTGGA +
Preference number: 5 (lower is better)
Translates to: AQTKRAKQNHLHAPGTSLHHDIG*TETYCG
Trigger: TCCACAGTAGGTCTCTGTCAAGCCGATGTCGTGATG...GAGGCTGGTGCCAGGCGCGTGTAAATGGTTTTGTTTTGCACGTTTGGTTTGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS TCA 90 bp TTCCTTGCCCATAGCTTTCTGCTTTGTGGTGAAAGGCCGGTGATCTaGTGCCACGATGTTCAGAGTGTCATTGGCCAGCAGGCTCATGAG +
Preference number: 5 (lower is better)
Translates to: FLAHSFLLCGERPVI*CHDVQSVIGQQAHE
Trigger: CTCATGAGCCTGCTGGCCAATGACACTCTGAACATCGTGGCATCAGATCACCGGCCTTTCACCACAAAGCAGAAAGCTATGGGCAAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288699.11
ENST00000401478.5
ENST00000614712.4
CDS TCA 90 bp AAGTCTTCCTTGCCCATAGCTTTCTGCTTTGTGGTGAAAGGCCGGTaGTCTGATGCCACGATGTTCAGAGTGTCATTGGCCAGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: KSSLPIAFCFVVKGR*SDATMFRVSLASRL
Trigger: GAGCCTGCTGGCCAATGACACTCTGAACATCGTGGCATCAGATCACCGGCCTTTCACCACAAAGCAGAAAGCTATGGGCAAGGAAGACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288699.11
ENST00000401478.5
ENST00000614712.4
CDS-3UTR CAA 90 bp AGAAGTTATAGGAAGCCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCATCGTTCACCACCTaGCCTCCCTTGATGAGGATC +
Preference number: 5 (lower is better)
Translates to: RSYRKPCVCVCVCVCVCVSSFTT*PPLMRI
Trigger: GATCCTCATCAAGGGAGGCAAGGTGGTGAACGATGA...CACACACACACACACACACACACACACACACACGCACGGCTTCCTATAACTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CAA 90 bp AGAAGTTATAGGAAGCCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATCCCAGGCCCCCTTTaGGAATGTGGGAAACTAGAC +
Preference number: 5 (lower is better)
Translates to: RSYRKPCVCVCVCVCVCVIPGPL*ECGKLD
Trigger: GTCTAGTTTCCCACATTCCAAAAGGGGGCCTGGGAT...CACACACACACACACACACACACACACACACACGCACGGCTTCCTATAACTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CAA 90 bp CTGTGCAAAACAAAGCAGGCTGCCTACCAGGAAAGTAAGTCTTCTCATTGGTTAACCACCTTGCCTCCCTaGATGAGGATCCTCACGCTG +
Preference number: 5 (lower is better)
Translates to: LCKTKQAAYQESKSSHWLTTLPP*MRILTL
Trigger: CAGCGTGAGGATCCTCATCAAGGGAGGCAAGGTGGT...TAACCAATGAGAAGACTTACTTTCCTGGTAGGCAGCCTGCTTTGTTTTGCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CAA 90 bp AGAAGTTATAGGAAGCCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATGTTCTCATACAGGTaGAAGTCTCCTCCCTGGACC +
Preference number: 5 (lower is better)
Translates to: RSYRKPCVCVCVCVCVCVMFSYR*KSPPWT
Trigger: GGTCCAGGGAGGAGACTTCAACCTGTATGAGAACAT...CACACACACACACACACACACACACACACACACGCACGGCTTCCTATAACTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CAA 90 bp AGAAGTTATAGGAAGCCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGAGCTGAAGCTCGCTTaGGAACATGGTCATCGATCT +
Preference number: 5 (lower is better)
Translates to: RSYRKPCVCVCVCVCVCVELKLA*EHGHRS
Trigger: AGATCGATGACCATGTTCCAAAGCGAGCTTCAGCTC...CACACACACACACACACACACACACACACACACGCACGGCTTCCTATAACTTCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS TCA 90 bp AAGTCTTCCTTGCCCATAGCTTTCTGCTTTGTGGTGAAAGGCCGGTaGTCTGATGCCACGATGTTCAGAGTGTCACTGGGTAGAGAAAAG +
Preference number: 5 (lower is better)
Translates to: KSSLPIAFCFVVKGR*SDATMFRVSLGREK
Trigger: CTTTTCTCTACCCAGTGACACTCTGAACATCGTGGCATCAGATCACCGGCCTTTCACCACAAAGCAGAAAGCTATGGGCAAGGAAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484882.1
CDS-3UTR CAA 90 bp AGAAGTTATAGGAAGCCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAGTGCCTGTTAGAGTaGGCTCGAAGCACAGTGAAT +
Preference number: 5 (lower is better)
Translates to: RSYRKPCVCVCVCVCVCVKCLLE*ARSTVN
Trigger: ATTCACTGTGCTTCGAGCCAACTCTAACAGGCACTT...CACACACACACACACACACACACACACACACACGCACGGCTTCCTATAACTTCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS-3UTR CAA 90 bp AGAAGTTATAGGAAGCCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAGTACAAGACCAGTTaGAGAGCTGCATTCAGTGCA +
Preference number: 5 (lower is better)
Translates to: RSYRKPCVCVCVCVCVCVKYKTS*RAAFSA
Trigger: TGCACTGAATGCAGCTCTCAAACTGGTCTTGTACTT...CACACACACACACACACACACACACACACACACGCACGGCTTCCTATAACTTCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS GCA 90 bp GGAATTGTATACCAATTCCCTCTCATCAGCTCTCCAACCCCAACCTaGTGGCAACAAGCATTCACAAGTTCAGTGTTAAGCTTTGTTGAA +
Preference number: 5 (lower is better)
Translates to: GIVYQFPLISSPTPT*WQQAFTSSVLSFVE
Trigger: TTCAACAAAGCTTAACACTGAACTTGTGAATGCTTGTTGCCAGCAGGTTGGGGTTGGAGAGCTGATGAGAGGGAATTGGTATACAATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484882.1
CDS-3UTR CAA 90 bp CTGTGCAAAACAAAGCAGGCTGCCTACCAGGAAAGTAAGTCTTCTCATTGGTTACGCTCATTTGGCTCCTaGAATCTCTTTCTGATTTCT +
Preference number: 5 (lower is better)
Translates to: LCKTKQAAYQESKSSHWLRSFGS*NLFLIS
Trigger: AGAAATCAGAAAGAGATTCAAGGAGCCAAATGAGCG...TAACCAATGAGAAGACTTACTTTCCTGGTAGGCAGCCTGCTTTGTTTTGCACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288699.11
ENST00000614712.4
CDS GCA 72 bp TGGCTGAGTTGGCAAGCATGTTCTCCTCCGAGATGCTaGGGCCGCGGGGGCCCGTGGCTCGGTCCGTCTCCG +
Preference number: 6 (lower is better)
Translates to: WLSWQACSPPRC*GRGGPWLGPSP
Trigger: CGGAGACGGACCGAGCCACGGGCCCCCGCGGCCGCAGCATCTCGGAGGAGAACATGCTTGCCAACTCAGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288699.11
CDS TCA 72 bp CAAGGGAGGTCTCCTTGTCGGGCAGGACGTGGCCGATaGTCATGGTGGTGCCTCCGACGAGTGCTGCCTTGG +
Preference number: 6 (lower is better)
Translates to: QGRSPCRAGRGR*SWWCLRRVLPW
Trigger: CCAAGGCAGCACTCGTCGGAGGCACCACCATGATCATCGGCCACGTCCTGCCCGACAAGGAGACCTCCCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288699.11
ENST00000401478.5
ENST00000431402.5
ENST00000434719.1
ENST00000450961.5
ENST00000614712.4
CDS CCA 72 bp GCGTCCACAAGGGAGGTCTCCTTGTCGGGCAGGACGTaGCCGATGATCATGGTGGTGCCTCCGACGAGTGCT +
Preference number: 6 (lower is better)
Translates to: ASTREVSLSGRT*PMIMVVPPTSA
Trigger: AGCACTCGTCGGAGGCACCACCATGATCATCGGCCACGTCCTGCCCGACAAGGAGACCTCCCTTGTGGACGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288699.11
ENST00000401478.5
ENST00000431402.5
ENST00000434719.1
ENST00000450961.5
ENST00000614712.4
CDS TCA 72 bp TTGAGGTGTTGGTGTCCAGTCTCAGGGGAGGCACCGTaGCATAGGCAGCCGCGTGGGACCAGTCCTGGTGGT +
Preference number: 6 (lower is better)
Translates to: LRCWCPVSGEAP*HRQPRGTSPGG
Trigger: ACCACCAGGACTGGTCCCACGCGGCTGCCTATGTCACGGTGCCTCCCCTGAGACTGGACACCAACACCTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288699.11
ENST00000401478.5
ENST00000614712.4
CDS CCA 72 bp TGCCCACGCAAACCAGGTCAGGGCCTCAAGAGGAAATaGCTTTGCGGGGCCAGAGAAAGGCCTGGCTGGAGC +
Preference number: 6 (lower is better)
Translates to: CPRKPGQGLKRK*LCGARERPGWS
Trigger: GCTCCAGCCAGGCCTTTCTCTGGCCCCGCAAAGCCATTTCCTCTTGAGGCCCTGACCTGGTTTGCGTGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484882.1
CDS TCA 72 bp CACCTTGCCTCCCTTGATGAGGATCCTCACGCTGGCTaGGTTGGCAAGCATGTTCCCGGCTCCCCGCCCTTT +
Preference number: 6 (lower is better)
Translates to: HLASLDEDPHAG*VGKHVPGSPPF
Trigger: AAAGGGCGGGGAGCCGGGAACATGCTTGCCAACTCAGCCAGCGTGAGGATCCTCATCAAGGGAGGCAAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401478.5
CDS CAA 72 bp CTGAGTTGGCAAGCATGTTCCCGGCTCCCCGCCCTTTaGTGCGCCTCACGCAGAAACAGAAGGGGGAGAGGA +
Preference number: 6 (lower is better)
Translates to: LSWQACSRLPAL*CASRRNRRGRG
Trigger: TCCTCTCCCCCTTCTGTTTCTGCGTGAGGCGCACAAAAGGGCGGGGAGCCGGGAACATGCTTGCCAACTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401478.5
CDS CAA 72 bp TTGCCTCCCTTGATGAGGATCCTCACGCTGGCTGAGTaGGCAAGCATGTTCTCCTCCGAGATGCTGCGGCCG +
Preference number: 6 (lower is better)
Translates to: LPPLMRILTLAE*ASMFSSEMLRP
Trigger: CGGCCGCAGCATCTCGGAGGAGAACATGCTTGCCAACTCAGCCAGCGTGAGGATCCTCATCAAGGGAGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288699.11
CDS CAA 72 bp ACGTCAGCCTCGTGGGTGCAGTCATCGTTCACCACCTaGCCTCCCTTGATGAGGATCCTCACGCTGGCTGAG +
Preference number: 6 (lower is better)
Translates to: TSASWVQSSFTT*PPLMRILTLAE
Trigger: CTCAGCCAGCGTGAGGATCCTCATCAAGGGAGGCAAGGTGGTGAACGATGACTGCACCCACGAGGCTGACGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288699.11
ENST00000401478.5
ENST00000431402.5
ENST00000434719.1
ENST00000450961.5
ENST00000614712.4
CDS CAA 72 bp TTGCCTCCCTTGATGAGGATCCTCACGCTGGCTGAGTaGGCAAGCATGTTCCCGGCTCCCCGCCCTTTTGTG +
Preference number: 6 (lower is better)
Translates to: LPPLMRILTLAE*ASMFPAPRPFV
Trigger: CACAAAAGGGCGGGGAGCCGGGAACATGCTTGCCAACTCAGCCAGCGTGAGGATCCTCATCAAGGGAGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401478.5
CDS CAA 72 bp TTGCCTCCCTTGATGAGGATCCTCACGCTGGCTGAGTaGGCAAGCATGTTCCCCAGGGCTTTGCAACCCCGC +
Preference number: 6 (lower is better)
Translates to: LPPLMRILTLAE*ASMFPRALQPR
Trigger: GCGGGGTTGCAAAGCCCTGGGGAACATGCTTGCCAACTCAGCCAGCGTGAGGATCCTCATCAAGGGAGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434719.1
CDS CAA 90 bp ACGTCAGCCTCGTGGGTGCAGTCATCGTTCACCACCTTGCCTCCCTaGATGAGGATCCTCACGCTGGCTGAGTTGGCAAGCATGTTCCCG +
Preference number: 6 (lower is better)
Translates to: TSASWVQSSFTTLPP*MRILTLAELASMFP
Trigger: CGGGAACATGCTTGCCAACTCAGCCAGCGTGAGGATCCTCATCAAGGGAGGCAAGGTGGTGAACGATGACTGCACCCACGAGGCTGACGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401478.5
CDS CAA 90 bp ACGTCAGCCTCGTGGGTGCAGTCATCGTTCACCACCTTGCCTCCCTaGATGAGGATCCTCACGCTGGCTGAGTTGGCAAGCATGTTCCCC +
Preference number: 6 (lower is better)
Translates to: TSASWVQSSFTTLPP*MRILTLAELASMFP
Trigger: GGGGAACATGCTTGCCAACTCAGCCAGCGTGAGGATCCTCATCAAGGGAGGCAAGGTGGTGAACGATGACTGCACCCACGAGGCTGACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434719.1
CDS CAA 90 bp ACGTCAGCCTCGTGGGTGCAGTCATCGTTCACCACCTTGCCTCCCTaGATGAGGATCCTCACGCTGGCTGAGTTGGCAAGCATGTTCTCC +
Preference number: 6 (lower is better)
Translates to: TSASWVQSSFTTLPP*MRILTLAELASMFS
Trigger: GGAGAACATGCTTGCCAACTCAGCCAGCGTGAGGATCCTCATCAAGGGAGGCAAGGTGGTGAACGATGACTGCACCCACGAGGCTGACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288699.11
CDS CAA 90 bp ACGTCAGCCTCGTGGGTGCAGTCATCGTTCACCACCTTGCCTCCCTaGATGAGGATCCTCACGCTGGCTGAGTTGGCAAGCATGTTCCGA +
Preference number: 6 (lower is better)
Translates to: TSASWVQSSFTTLPP*MRILTLAELASMFR
Trigger: TCGGAACATGCTTGCCAACTCAGCCAGCGTGAGGATCCTCATCAAGGGAGGCAAGGTGGTGAACGATGACTGCACCCACGAGGCTGACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450961.5
CDS TCA 72 bp CACCTTGCCTCCCTTGATGAGGATCCTCACGCTGGCTaGGTTGGCAAGCATGTTCTCCTCCGAGATGCTGCG +
Preference number: 6 (lower is better)
Translates to: HLASLDEDPHAG*VGKHVLLRDAA
Trigger: CGCAGCATCTCGGAGGAGAACATGCTTGCCAACTCAGCCAGCGTGAGGATCCTCATCAAGGGAGGCAAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288699.11
CDS TCA 72 bp CACCTTGCCTCCCTTGATGAGGATCCTCACGCTGGCTaGGTTGGCAAGCATGTTCCCCAGGGCTTTGCAACC +
Preference number: 6 (lower is better)
Translates to: HLASLDEDPHAG*VGKHVPQGFAT
Trigger: GGTTGCAAAGCCCTGGGGAACATGCTTGCCAACTCAGCCAGCGTGAGGATCCTCATCAAGGGAGGCAAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434719.1
CDS GCA 72 bp CTCGATTCCTTCTGGGCCTGTGATCCCCAAATCCAGTaGCTCCTTAGCACCCTCGGCCACAAGCTCCCCATT +
Preference number: 6 (lower is better)
Translates to: LDSFWACDPQIQ*LLSTLGHKLPI
Trigger: AATGGGGAGCTTGTGGCCGAGGGTGCTAAGGAGGCACTGGATTTGGGGATCACAGGCCCAGAAGGAATCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288699.11
ENST00000401478.5
ENST00000614712.4
CDS GCA 72 bp ACGGGGGACCTGGCAGGGCTTATCAGTCTCAGCTCCTaGCCAGTGACTAATGTCTTTGGCCAAACCCGTGGT +
Preference number: 6 (lower is better)
Translates to: TGDLAGLISLSS*PVTNVFGQTRG
Trigger: ACCACGGGTTTGGCCAAAGACATTAGTCACTGGGCAGGAGCTGAGACTGATAAGCCCTGCCAGGTCCCCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484882.1
CDS CCA 72 bp ACCAGTCCTGGTGGTAGTAGTGTAAGCCTGTCAGCGTaGCATGTGCAGTGGTGGTCTCCGCCAGCACAACCT +
Preference number: 6 (lower is better)
Translates to: TSPGGSSVSLSA*HVQWWSPPAQP
Trigger: AGGTTGTGCTGGCGGAGACCACCACTGCACATGCCACGCTGACAGGCTTACACTACTACCACCAGGACTGGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288699.11
ENST00000401478.5
ENST00000614712.4
CDS CAA 72 bp TCGTGGGTGCAGTCATCGTTCACCACCTTGCCTCCCTaGATGAGGATCCTCACGCTGGCTGAGTTGGCAAGC +
Preference number: 6 (lower is better)
Translates to: SWVQSSFTTLPP*MRILTLAELAS
Trigger: GCTTGCCAACTCAGCCAGCGTGAGGATCCTCATCAAGGGAGGCAAGGTGGTGAACGATGACTGCACCCACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288699.11
ENST00000401478.5
ENST00000431402.5
ENST00000434719.1
ENST00000450961.5
ENST00000614712.4
CDS CAA 72 bp TTGCCTCCCTTGATGAGGATCCTCACGCTGGCTGAGTaGGCAAGCATGTTCTATGAGCAAGGCCCGGCACGG +
Preference number: 6 (lower is better)
Translates to: LPPLMRILTLAE*ASMFYEQGPAR
Trigger: CCGTGCCGGGCCTTGCTCATAGAACATGCTTGCCAACTCAGCCAGCGTGAGGATCCTCATCAAGGGAGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431402.5
ENST00000614712.4
CDS GCA 72 bp TGGACGCGGGCGATTGCCCCAATGTCCTTGCAAGCGTaGAACACTTGGTACAGCTCACTGTCTCGAAGCATG +
Preference number: 6 (lower is better)
Translates to: WTRAIAPMSLQA*NTWYSSLSRSM
Trigger: CATGCTTCGAGACAGTGAGCTGTACCAAGTGTTGCACGCTTGCAAGGACATTGGGGCAATCGCCCGCGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288699.11
ENST00000401478.5
ENST00000614712.4
CDS CCA 72 bp TTCCAGCTCCTCTGGACGGCTGATCTCGATTCCTTCTaGGCCTGTGATCCCCAAATCCAGTGCCTCCTTAGC +
Preference number: 6 (lower is better)
Translates to: FQLLWTADLDSF*ACDPQIQCLLS
Trigger: GCTAAGGAGGCACTGGATTTGGGGATCACAGGCCCAGAAGGAATCGAGATCAGCCGTCCAGAGGAGCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288699.11
ENST00000401478.5
ENST00000614712.4
CDS CCA 72 bp GGTAGTAGTGTAAGCCTGTCAGCGTGGCATGTGCAGTaGTGGTCTCCGCCAGCACAACCTTCCCTTGCATCT +
Preference number: 6 (lower is better)
Translates to: GSSVSLSAWHVQ*WSPPAQPSLAS
Trigger: AGATGCAAGGGAAGGTTGTGCTGGCGGAGACCACCACTGCACATGCCACGCTGACAGGCTTACACTACTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288699.11
ENST00000401478.5
ENST00000614712.4
CDS CCA 72 bp CTTCTCTCTCTGGACCAGCTTCTTGTAGACAGTGTCTaGGAAGGACCTCAGGGGACAGAACTTGCCGGTGCC +
Preference number: 6 (lower is better)
Translates to: LLSLDQLLVDSV*EGPQGTELAGA
Trigger: GGCACCGGCAAGTTCTGTCCCCTGAGGTCCTTCCCAGACACTGTCTACAAGAAGCTGGTCCAGAGAGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288699.11
ENST00000401478.5
ENST00000484882.1
ENST00000614712.4
CDS CAA 90 bp ACGTCAGCCTCGTGGGTGCAGTCATCGTTCACCACCTTGCCTCCCTaGATGAGGATCCTCACGCTGGCTGAGTTGGCAAGCATGTTCTAT +
Preference number: 6 (lower is better)
Translates to: TSASWVQSSFTTLPP*MRILTLAELASMFY
Trigger: ATAGAACATGCTTGCCAACTCAGCCAGCGTGAGGATCCTCATCAAGGGAGGCAAGGTGGTGAACGATGACTGCACCCACGAGGCTGACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431402.5
ENST00000614712.4
CDS GCA 72 bp TTTCAGCATGGACGCGGGCGATTGCCCCAATGTCCTTaGAAGCGTGCAACACTTGGTACAGCTCACTGTCTC +
Preference number: 6 (lower is better)
Translates to: FQHGRGRLPQCP*KRATLGTAHCL
Trigger: GAGACAGTGAGCTGTACCAAGTGTTGCACGCTTGCAAGGACATTGGGGCAATCGCCCGCGTCCATGCTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288699.11
ENST00000401478.5
ENST00000614712.4
CDS GCA 72 bp CACAAGCTCCCCATTTTCAGCATGGACGCGGGCGATTaGCCCAATGTCCTTGCAAGCGTGCAACACTTGGTA +
Preference number: 6 (lower is better)
Translates to: HKLPIFSMDAGD*PNVLASVQHLV
Trigger: TACCAAGTGTTGCACGCTTGCAAGGACATTGGGGCAATCGCCCGCGTCCATGCTGAAAATGGGGAGCTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288699.11
ENST00000401478.5
ENST00000614712.4
CDS CCA 72 bp GACGCTCATGCGGTCCTGCACGCCACTCACTCCATGTaGGATCTTGGTGAAGTCTTCCTTGCCCATAGCTTT +
Preference number: 6 (lower is better)
Translates to: DAHAVLHATHSM*DLGEVFLAHSF
Trigger: AAAGCTATGGGCAAGGAAGACTTCACCAAGATCCCACATGGAGTGAGTGGCGTGCAGGACCGCATGAGCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288699.11
ENST00000401478.5
ENST00000484882.1
ENST00000614712.4
CDS CAA 90 bp ATGGACGCGGGCGATTGCCCCAATGTCCTTGCAAGCGTGCAACACTaGGTACAGCTCACTGTCTCGAAGCATGTACAGGTCCTTGTAGGT +
Preference number: 6 (lower is better)
Translates to: MDAGDCPNVLASVQH*VQLTVSKHVQVLVG
Trigger: ACCTACAAGGACCTGTACATGCTTCGAGACAGTGAGCTGTACCAAGTGTTGCACGCTTGCAAGGACATTGGGGCAATCGCCCGCGTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288699.11
ENST00000401478.5
ENST00000614712.4
CDS TCA 72 bp ACCTGGCAGGGCTTATCAGTCTCAGCTCCTGCCCAGTaGCTAATGTCTTTGGCCAAACCCGTGGTGAAGATG +
Preference number: 6 (lower is better)
Translates to: TWQGLSVSAPAQ*LMSLAKPVVKM
Trigger: CATCTTCACCACGGGTTTGGCCAAAGACATTAGTCACTGGGCAGGAGCTGAGACTGATAAGCCCTGCCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484882.1
CDS CCA 72 bp GCGATTGCCCCAATGTCCTTGCAAGCGTGCAACACTTaGTACAGCTCACTGTCTCGAAGCATGTACAGGTCC +
Preference number: 6 (lower is better)
Translates to: AIAPMSLQACNT*YSSLSRSMYRS
Trigger: GGACCTGTACATGCTTCGAGACAGTGAGCTGTACCAAGTGTTGCACGCTTGCAAGGACATTGGGGCAATCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288699.11
ENST00000401478.5
ENST00000431402.5
ENST00000614712.4
CDS CAA 72 bp TTTTCAGCATGGACGCGGGCGATTGCCCCAATGTCCTaGCAAGCGTGCAACACTTGGTACAGCTCACTGTCT +
Preference number: 6 (lower is better)
Translates to: FSAWTRAIAPMS*QACNTWYSSLS
Trigger: AGACAGTGAGCTGTACCAAGTGTTGCACGCTTGCAAGGACATTGGGGCAATCGCCCGCGTCCATGCTGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288699.11
ENST00000401478.5
ENST00000614712.4
CDS TCA 72 bp GACCTGGTGAGGAAGCATATTCTTAAGGCTCTCAGATaGTGGCCAGTTAGCTCCATAGGGCTGTCTCCACGG +
Preference number: 6 (lower is better)
Translates to: DLVRKHILKALR*WPVSSIGLSPR
Trigger: CCGTGGAGACAGCCCTATGGAGCTAACTGGCCATCATCTGAGAGCCTTAAGAATATGCTTCCTCACCAGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484882.1
CDS CAA 72 bp ATGCGGTCCTGCACGCCACTCACTCCATGTGGGATCTaGGTGAAGTCTTCCTTGCCCATAGCTTTCTGCTTT +
Preference number: 6 (lower is better)
Translates to: MRSCTPLTPCGI*VKSSLPIAFCF
Trigger: AAAGCAGAAAGCTATGGGCAAGGAAGACTTCACCAAGATCCCACATGGAGTGAGTGGCGTGCAGGACCGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288699.11
ENST00000401478.5
ENST00000484882.1
ENST00000614712.4
CDS CAA 90 bp ATGACGCTCATGCGGTCCTGCACGCCACTCACTCCATGTGGGATCTaGGTGAAGTCTTCCTTGCCCATAGCTTTCTGCTTTGTGGTGAAA +
Preference number: 6 (lower is better)
Translates to: MTLMRSCTPLTPCGI*VKSSLPIAFCFVVK
Trigger: TTTCACCACAAAGCAGAAAGCTATGGGCAAGGAAGACTTCACCAAGATCCCACATGGAGTGAGTGGCGTGCAGGACCGCATGAGCGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288699.11
ENST00000401478.5
ENST00000484882.1
ENST00000614712.4
CDS TCA 72 bp CATAGCTTTCTGCTTTGTGGTGAAAGGCCGGTGATCTaGTGCCACGATGTTCAGAGTGTCATTGGCCAGCAG +
Preference number: 6 (lower is better)
Translates to: HSFLLCGERPVI*CHDVQSVIGQQ
Trigger: CTGCTGGCCAATGACACTCTGAACATCGTGGCATCAGATCACCGGCCTTTCACCACAAAGCAGAAAGCTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288699.11
ENST00000401478.5
ENST00000614712.4
CDS CCA 72 bp ACCAGCCGAGATACTGGACACGTTGACCAGGTAGATTaGACAGTGAGTCCTGTTTGCAATGGTGATAACACG +
Preference number: 6 (lower is better)
Translates to: TSRDTGHVDQVD*TVSPVCNGDNT
Trigger: CGTGTTATCACCATTGCAAACAGGACTCACTGTCCAATCTACCTGGTCAACGTGTCCAGTATCTCGGCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288699.11
ENST00000401478.5
ENST00000614712.4
CDS CCA 72 bp CAATTCCCTCTCATCAGCTCTCCAACCCCAACCTGCTaGCAACAAGCATTCACAAGTTCAGTGTTAAGCTTT +
Preference number: 6 (lower is better)
Translates to: QFPLISSPTPTC*QQAFTSSVLSF
Trigger: AAAGCTTAACACTGAACTTGTGAATGCTTGTTGCCAGCAGGTTGGGGTTGGAGAGCTGATGAGAGGGAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484882.1
CDS TCA 72 bp GAAGATAGCAGAGAAAAGCCGAACTTAGAGTCTAGCTaGAGTGAGATGGTGGAGGTAGTTCTACTCTCATGG +
Preference number: 6 (lower is better)
Translates to: EDSREKPNLESS*SEMVEVVLLSW
Trigger: CCATGAGAGTAGAACTACCTCCACCATCTCACTTCAGCTAGACTCTAAGTTCGGCTTTTCTCTGCTATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484882.1
CDS TCA 72 bp GCAACAAGCATTCACAAGTTCAGTGTTAAGCTTTGTTaGATAACTTGGACTCATAGCCTTCCTTGGATGTGG +
Preference number: 6 (lower is better)
Translates to: ATSIHKFSVKLC*ITWTHSLPWMW
Trigger: CCACATCCAAGGAAGGCTATGAGTCCAAGTTATTCAACAAAGCTTAACACTGAACTTGTGAATGCTTGTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484882.1