RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DPYSL3 (Homo sapiens)

Ensembl gene IDs: ENSG00000113657

Ensembl transcript IDs: ENST00000343218.10, ENST00000398514.7, ENST00000504965.1, ENST00000507309.5, ENST00000508042.1, ENST00000512722.1, ENST00000519672.1, ENST00000520473.1, ENST00000523458.1

Found 661 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGTGGGTGCCCTCACCACGTGGGCCTGTGCTATGTTCTCAGCTGCTaGCTTTTAAGAGCACCAAAGAGGCAGGGAGGGCAAGAGGAAGAG +
Preference number: 1 (lower is better)
Translates to: CGCPHHVGLCYVLSC*LLRAPKRQGGQEEE
Trigger: CTCTTCCTCTTGCCCTCCCTGCCTCTTTGGTGCTCTTAAAAGCCAGCAGCTGAGAACATAGCACAGGCCCACGTGGTGAGGGCACCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR CCA 90 bp TGCTGGCTGCCCAGGGCAGCCCATGAGTGTATCTGGGACTCAAGCTaGAGTTTTCCAGGGGAGAAAGCCTGGGAAGCTTGTGGCAAGGAA +
Preference number: 1 (lower is better)
Translates to: CWLPRAAHECIWDSS*SFPGEKAWEACGKE
Trigger: TTCCTTGCCACAAGCTTCCCAGGCTTTCTCCCCTGGAAAACTCCAGCTTGAGTCCCAGATACACTCATGGGCTGCCCTGGGCAGCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR GCA 90 bp AGGCAGGGAGGGCAAGAGGAAGAGAAGTGTCATTTGCTCTGTCCCTaGCTGGCCTTCCCAACCCAGGAAAGAGAAGGATTTGAAAGCAAC +
Preference number: 1 (lower is better)
Translates to: RQGGQEEEKCHLLCP*LAFPTQEREGFESN
Trigger: GTTGCTTTCAAATCCTTCTCTTTCCTGGGTTGGGAAGGCCAGGCAGGGACAGAGCAAATGACACTTCTCTTCCTCTTGCCCTCCCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR TCA 90 bp TTCTGGTGGAATGGTTCACTTCGGAAGTCCCAAGGGCAGTGCGGATaGCCGATTTGGCCATGGAAGACTTATCTTCATGGCACAGAGAGG +
Preference number: 1 (lower is better)
Translates to: FWWNGSLRKSQGQCG*PIWPWKTYLHGTER
Trigger: CCTCTCTGTGCCATGAAGATAAGTCTTCCATGGCCAAATCGGTCATCCGCACTGCCCTTGGGACTTCCGAAGTGAACCATTCCACCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR GCA 90 bp CCCACACACCAGTTTTCAAAGAGGGAACTTACAATGAATGCTGGCTaGCCAGGGCAGCCCATGAGTGTATCTGGGACTCAAGCTGGAGTT +
Preference number: 1 (lower is better)
Translates to: PTHQFSKRELTMNAG*PGQPMSVSGTQAGV
Trigger: AACTCCAGCTTGAGTCCCAGATACACTCATGGGCTGCCCTGGGCAGCCAGCATTCATTGTAAGTTCCCTCTTTGAAAACTGGTGTGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR GCA 90 bp CTGAACACCCACACACCAGTTTTCAAAGAGGGAACTTACAATGAATaGTGGCTGCCCAGGGCAGCCCATGAGTGTATCTGGGACTCAAGC +
Preference number: 1 (lower is better)
Translates to: LNTHTPVFKEGTYNE*WLPRAAHECIWDSS
Trigger: GCTTGAGTCCCAGATACACTCATGGGCTGCCCTGGGCAGCCAGCATTCATTGTAAGTTCCCTCTTTGAAAACTGGTGTGTGGGTGTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR CCA 90 bp AACACCCACACACCAGTTTTCAAAGAGGGAACTTACAATGAATGCTaGCTGCCCAGGGCAGCCCATGAGTGTATCTGGGACTCAAGCTGG +
Preference number: 1 (lower is better)
Translates to: NTHTPVFKEGTYNEC*LPRAAHECIWDSSW
Trigger: CCAGCTTGAGTCCCAGATACACTCATGGGCTGCCCTGGGCAGCCAGCATTCATTGTAAGTTCCCTCTTTGAAAACTGGTGTGTGGGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR TCA 90 bp CTTTGGAATCAGATAGACGATCCAGCGTGCCTTCCTACACTTGCATaGGGTGCCAGTGAATTCGAAGAGGGCCGGGACTCACCATTGTTT +
Preference number: 1 (lower is better)
Translates to: LWNQIDDPACLPTLA*GASEFEEGRDSPLF
Trigger: AAACAATGGTGAGTCCCGGCCCTCTTCGAATTCACTGGCACCTCATGCAAGTGTAGGAAGGCACGCTGGATCGTCTATCTGATTCCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR GCA 90 bp AACAGGTGGTTTGGAATGGAAAGGTGGAACCAGGTCCACAAAATGTaGTCCCTCTGCTCAAGACTGACTTTGGCTTTCCCAGTTCCCCAC +
Preference number: 1 (lower is better)
Translates to: NRWFGMERWNQVHKM*SLCSRLTLAFPVPH
Trigger: GTGGGGAACTGGGAAAGCCAAAGTCAGTCTTGAGCAGAGGGAGCACATTTTGTGGACCTGGTTCCACCTTTCCATTCCAAACCACCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR GCA 90 bp AGGCCTGCTCTTCTCTTCAAAGCACTTAGTACACAGGGTTACAGGTaGTACCACTTGGATTCCCCAGAGCATGGAAGTCTGATCCCAGGT +
Preference number: 1 (lower is better)
Translates to: RPALLFKALSTQGYR*YHLDSPEHGSLIPG
Trigger: ACCTGGGATCAGACTTCCATGCTCTGGGGAATCCAAGTGGTAGCACCTGTAACCCTGTGTACTAAGTGCTTTGAAGAGAAGAGCAGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR GCA 90 bp CTCCCAAGGGCATTTGGGGGTTGTTCCCAGAGCAAGGAAATCTTGTaGAGAATCAAAGGTTCTGGTGGAATGGTTCACTTCGGAAGTCCC +
Preference number: 1 (lower is better)
Translates to: LPRAFGGCSQSKEIL*RIKGSGGMVHFGSP
Trigger: GGGACTTCCGAAGTGAACCATTCCACCAGAACCTTTGATTCTGCACAAGATTTCCTTGCTCTGGGAACAACCCCCAAATGCCCTTGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR CCA 90 bp AGGGAGGGCAAGAGGAAGAGAAGTGTCATTTGCTCTGTCCCTGCCTaGCCTTCCCAACCCAGGAAAGAGAAGGATTTGAAAGCAACACTA +
Preference number: 1 (lower is better)
Translates to: REGKRKRSVICSVPA*PSQPRKEKDLKATL
Trigger: TAGTGTTGCTTTCAAATCCTTCTCTTTCCTGGGTTGGGAAGGCCAGGCAGGGACAGAGCAAATGACACTTCTCTTCCTCTTGCCCTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR CCA 90 bp CAGGTGCCCCATGAGGAAGACTGCATCATGTCACTTCCACTCACTTaGGGAGATTCTAGGACTGAGACACAAAGTTCCCCCAGAGTTTCT +
Preference number: 1 (lower is better)
Translates to: QVPHEEDCIMSLPLT*GDSRTETQSSPRVS
Trigger: AGAAACTCTGGGGGAACTTTGTGTCTCAGTCCTAGAATCTCCCCAAGTGAGTGGAAGTGACATGATGCAGTCTTCCTCATGGGGCACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR CCA 90 bp CCCAGAGCAAGGAAATCTTGTGCAGAATCAAAGGTTCTGGTGGAATaGTTCACTTCGGAAGTCCCAAGGGCAGTGCGGATGACCGATTTG +
Preference number: 1 (lower is better)
Translates to: PRARKSCAESKVLVE*FTSEVPRAVRMTDL
Trigger: CAAATCGGTCATCCGCACTGCCCTTGGGACTTCCGAAGTGAACCATTCCACCAGAACCTTTGATTCTGCACAAGATTTCCTTGCTCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR TCA 90 bp ATGCCAGAAGCATGCCACTCTTCTCGGTTTGCAAAGACAGAAGAGTaGGAGGTGACCTCGCCGTGTTTAGAAGGAAGCGTCTTTAAGCTG +
Preference number: 1 (lower is better)
Translates to: MPEACHSSRFAKTEE*EVTSPCLEGSVFKL
Trigger: CAGCTTAAAGACGCTTCCTTCTAAACACGGCGAGGTCACCTCTCACTCTTCTGTCTTTGCAAACCGAGAAGAGTGGCATGCTTCTGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR TCA 90 bp CCTGTAAGAGAGGCCCTTCATTCTGCCTCATCTGAGCTAAAATCCTaGCTTGGGATGCCAGAAGCATGCCACTCTTCTCGGTTTGCAAAG +
Preference number: 1 (lower is better)
Translates to: PVREALHSASSELKS*LGMPEACHSSRFAK
Trigger: CTTTGCAAACCGAGAAGAGTGGCATGCTTCTGGCATCCCAAGTCAGGATTTTAGCTCAGATGAGGCAGAATGAAGGGCCTCTCTTACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR GCA 90 bp AAAATCCTGACTTGGGATGCCAGAAGCATGCCACTCTTCTCGGTTTaGAAAGACAGAAGAGTGAGAGGTGACCTCGCCGTGTTTAGAAGG +
Preference number: 1 (lower is better)
Translates to: KILTWDARSMPLFSV*KDRRVRGDLAVFRR
Trigger: CCTTCTAAACACGGCGAGGTCACCTCTCACTCTTCTGTCTTTGCAAACCGAGAAGAGTGGCATGCTTCTGGCATCCCAAGTCAGGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR GCA 90 bp CGAAGCACCCACACTAATTTCTTTCAGGTGCCCCATGAGGAAGACTaGATCATGTCACTTCCACTCACTTGGGGAGATTCTAGGACTGAG +
Preference number: 1 (lower is better)
Translates to: RSTHTNFFQVPHEED*IMSLPLTWGDSRTE
Trigger: CTCAGTCCTAGAATCTCCCCAAGTGAGTGGAAGTGACATGATGCAGTCTTCCTCATGGGGCACCTGAAAGAAATTAGTGTGGGTGCTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR TCA 90 bp CAAACACAAACTGCCTGTAAGAGAGGCCCTTCATTCTGCCTCATCTaGGCTAAAATCCTGACTTGGGATGCCAGAAGCATGCCACTCTTC +
Preference number: 1 (lower is better)
Translates to: QTQTACKRGPSFCLI*AKILTWDARSMPLF
Trigger: GAAGAGTGGCATGCTTCTGGCATCCCAAGTCAGGATTTTAGCTCAGATGAGGCAGAATGAAGGGCCTCTCTTACAGGCAGTTTGTGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR TCA 90 bp ATGCTTGGAGAGTTAGTAATGGTAAGTGAAGAAAGAGAGGCTTCCTaGGCTCATGTTGTTCCTCCCAAGGGCATTTGGGGGTTGTTCCCA +
Preference number: 1 (lower is better)
Translates to: MLGELVMVSEEREAS*AHVVPPKGIWGLFP
Trigger: TGGGAACAACCCCCAAATGCCCTTGGGAGGAACAACATGAGCTCAGGAAGCCTCTCTTTCTTCACTTACCATTACTAACTCTCCAAGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR GCA 90 bp TTCATTTCCCTGACGTCCCAGCTTGTCTGTCCCCTTGTCATAAGATaGAGCACTACACACGCTCTCAACACTATGATAGAGCAGACTCTT +
Preference number: 1 (lower is better)
Translates to: FISLTSQLVCPLVIR*STTHALNTMIEQTL
Trigger: AAGAGTCTGCTCTATCATAGTGTTGAGAGCGTGTGTAGTGCTGCATCTTATGACAAGGGGACAGACAAGCTGGGACGTCAGGGAAATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR GCA 90 bp GTTTTGTTCACGGTTCAAACCAAACAGCTCTTCACGTTCCAGAGCTaGCTCACAGCTAGCACAGATCACAGGAGATTACTGTCTGTCCAT +
Preference number: 1 (lower is better)
Translates to: VLFTVQTKQLFTFQS*LTASTDHRRLLSVH
Trigger: ATGGACAGACAGTAATCTCCTGTGATCTGTGCTAGCTGTGAGGCAGCTCTGGAACGTGAAGAGCTGTTTGGTTTGAACCGTGAACAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR CCA 90 bp TTCTCAGGGATGAGTGAAAATCCAGGCTCAGGTGTCAGCCCTTTGTaGAAACATGACACTCTCAGTATAGACAGTCGTGAAGAACAAGGC +
Preference number: 1 (lower is better)
Translates to: FSGMSENPGSGVSPL*KHDTLSIDSREEQG
Trigger: GCCTTGTTCTTCACGACTGTCTATACTGAGAGTGTCATGTTTCCACAAAGGGCTGACACCTGAGCCTGGATTTTCACTCATCCCTGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR TCA 90 bp ACCCAGGAAAGAGAAGGATTTGAAAGCAACACTAAGAAAGAGGCCTaGGCAAACACTGGCACAATCAAGCAGGTGGAAGAAATGGTTGGG +
Preference number: 1 (lower is better)
Translates to: TQEREGFESNTKKEA*ANTGTIKQVEEMVG
Trigger: CCCAACCATTTCTTCCACCTGCTTGATTGTGCCAGTGTTTGCTCAGGCCTCTTTCTTAGTGTTGCTTTCAAATCCTTCTCTTTCCTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR CCA 90 bp GAAGCGAGTTTATGTGTGTCTTTTCCTCTATCTGCTGGCTGTGGCTaGTACTGCAACCTATCCCAAAGTAACAGCCTAGTCAATGAGGTA +
Preference number: 1 (lower is better)
Translates to: EASLCVSFPLSAGCG*YCNLSQSNSLVNEV
Trigger: TACCTCATTGACTAGGCTGTTACTTTGGGATAGGTTGCAGTACCAGCCACAGCCAGCAGATAGAGGAAAAGACACACATAAACTCGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR TCA 90 bp GATCACAGGAGATTACTGTCTGTCCATACCCACCAGACACAGAACTaGACACCCACACACCAGTTTTCAAAGAGGGAACTTACAATGAAT +
Preference number: 1 (lower is better)
Translates to: DHRRLLSVHTHQTQN*TPTHQFSKRELTMN
Trigger: ATTCATTGTAAGTTCCCTCTTTGAAAACTGGTGTGTGGGTGTTCAGTTCTGTGTCTGGTGGGTATGGACAGACAGTAATCTCCTGTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR GCA 90 bp AGTTTATGTGTGTCTTTTCCTCTATCTGCTGGCTGTGGCTGGTACTaGAACCTATCCCAAAGTAACAGCCTAGTCAATGAGGTATATGCT +
Preference number: 1 (lower is better)
Translates to: SLCVSFPLSAGCGWY*NLSQSNSLVNEVYA
Trigger: AGCATATACCTCATTGACTAGGCTGTTACTTTGGGATAGGTTGCAGTACCAGCCACAGCCAGCAGATAGAGGAAAAGACACACATAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR CCA 90 bp ACACTAAGAAAGAGGCCTGAGCAAACACTGGCACAATCAAGCAGGTaGAAGAAATGGTTGGGTCTTGGCATTTTAATAAACGTTCAAAGA +
Preference number: 1 (lower is better)
Translates to: TLRKRPEQTLAQSSR*KKWLGLGILINVQR
Trigger: TCTTTGAACGTTTATTAAAATGCCAAGACCCAACCATTTCTTCCACCTGCTTGATTGTGCCAGTGTTTGCTCAGGCCTCTTTCTTAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR CCA 90 bp TTGGCTATCTCCAAATTCCTTTGTAGCCCAGTGTGTACTTTTCTCTaGTCTTCAACTTATTCAAACCTGCAGTCAGAGACAATGGTTTCT +
Preference number: 1 (lower is better)
Translates to: LAISKFLCSPVCTFL*SSTYSNLQSETMVS
Trigger: AGAAACCATTGTCTCTGACTGCAGGTTTGAATAAGTTGAAGACCAGAGAAAAGTACACACTGGGCTACAAAGGAATTTGGAGATAGCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR TCA 90 bp TCTAGAAAACTTAGAAGTACAAGAAATAGCTCTACTACGGGTAACTaGTTTAACAATTTCCCAAACACCCTTTCCACTACCCAAGCCCGT +
Preference number: 1 (lower is better)
Translates to: SRKLRSTRNSSTTGN*FNNFPNTLSTTQAR
Trigger: ACGGGCTTGGGTAGTGGAAAGGGTGTTTGGGAAATTGTTAAATCAGTTACCCGTAGTAGAGCTATTTCTTGTACTTCTAAGTTTTCTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR GCA 90 bp CACCTAATAAAACCAACTTTCAAAAACTCCTATTTATCATGGATGTaGCAGGATCGAGAGAATCAAACACAAACTGCCTGTAAGAGAGGC +
Preference number: 1 (lower is better)
Translates to: HLIKPTFKNSYLSWM*QDRENQTQTACKRG
Trigger: GCCTCTCTTACAGGCAGTTTGTGTTTGATTCTCTCGATCCTGGCACATCCATGATAAATAGGAGTTTTTGAAAGTTGGTTTTATTAGGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR CCA 90 bp AGGGAACACCTAATAAAACCAACTTTCAAAAACTCCTATTTATCATaGATGTGCCAGGATCGAGAGAATCAAACACAAACTGCCTGTAAG +
Preference number: 1 (lower is better)
Translates to: REHLIKPTFKNSYLS*MCQDRENQTQTACK
Trigger: CTTACAGGCAGTTTGTGTTTGATTCTCTCGATCCTGGCACATCCATGATAAATAGGAGTTTTTGAAAGTTGGTTTTATTAGGTGTTCCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR TCA 90 bp TGGTTCTATAGATTCTTATCTTGCTCACAGGACTTGCTCCAAAACTaGATTTTCAGAAGCAGCATGATAGGGAAAGAGATATTCAACTCT +
Preference number: 1 (lower is better)
Translates to: WFYRFLSCSQDLLQN*IFRSSMIGKEIFNS
Trigger: AGAGTTGAATATCTCTTTCCCTATCATGCTGCTTCTGAAAATTCAGTTTTGGAGCAAGTCCTGTGAGCAAGATAAGAATCTATAGAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR CAA 90 bp CCAGCCCCCTGGGTCACGTGCAGGTTGCCATCTTCCAGCATGATCTaGCCCTGGCAGATGACAACCAGAGGAGCCCCGCGCAGCTCCATC +
Preference number: 2 (lower is better)
Translates to: PAPWVTCRLPSSSMI*PWQMTTRGAPRSSI
Trigger: GATGGAGCTGCGCGGGGCTCCTCTGGTTGTCATCTGCCAGGGCAAGATCATGCTGGAAGATGGCAACCTGCACGTGACCCAGGGGGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523458.1
3UTR-3UTR TCA 90 bp GCTGCAGGGTATGAAGCGGCCAGCCCCCTGGGTCACGTGCAGGTTGCCATCTTCCATCTGGATCCCAGATaGCGAGGTCGCTGTCAGAAC +
Preference number: 2 (lower is better)
Translates to: AAGYEAASPLGHVQVAIFHLDPR*RGRCQN
Trigger: GTTCTGACAGCGACCTCGTCATCTGGGATCCAGATG...GAAGATGGCAACCTGCACGTGACCCAGGGGGCTGGCCGCTTCATACCCTGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523458.1
3UTR-3UTR TCA 90 bp GCTGCAGGGTATGAAGCGGCCAGCCCCCTGGGTCACGTGCAGGTTGCCATCTTCTGCGGGGATACAGGTTaGAGATCTTGGCAGCGTTTG +
Preference number: 2 (lower is better)
Translates to: AAGYEAASPLGHVQVAIFCGDTG*RSWQRL
Trigger: CAAACGCTGCCAAGATCTTCAACCTGTATCCCCGCA...GAAGATGGCAACCTGCACGTGACCCAGGGGGCTGGCCGCTTCATACCCTGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523458.1
3UTR-3UTR CCA 90 bp GGGCTGCAGGGTATGAAGCGGCCAGCCCCCTGGGTCACGTGCAGGTTGCCATCTCAGACTGGTGGTTCTTaGCAGAGACGATCTTCACAG +
Preference number: 2 (lower is better)
Translates to: GLQGMKRPAPWVTCRLPSQTGGS*QRRSSQ
Trigger: CTGTGAAGATCGTCTCTGCCAAGAACCACCAGTCTG...AGATGGCAACCTGCACGTGACCCAGGGGGCTGGCCGCTTCATACCCTGCAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523458.1
3UTR-3UTR GCA 90 bp CCAGGGCAGCCCATGAGTGTATCTGGGACTCAAGCTGGAGTTTTCCAGGGGAGATCTTTAAGCTGTGGGTaGCCTCACCACGTGGGCCTG +
Preference number: 2 (lower is better)
Translates to: PGQPMSVSGTQAGVFQGRSLSCG*PHHVGL
Trigger: CAGGCCCACGTGGTGAGGGCACCCACAGCTTAAAGA...TCTCCCCTGGAAAACTCCAGCTTGAGTCCCAGATACACTCATGGGCTGCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR TCA 90 bp AGAGGCTTCCTGAGCTCATGTTGTTCCTCCCAAGGGCATTTGGGGGTTGTTCCCCAAGGGCAGTGCGGATaGCCGATTTGGCCATGGAAG +
Preference number: 2 (lower is better)
Translates to: RGFLSSCCSSQGHLGVVPQGQCG*PIWPWK
Trigger: CTTCCATGGCCAAATCGGTCATCCGCACTGCCCTTG...GGGAACAACCCCCAAATGCCCTTGGGAGGAACAACATGAGCTCAGGAAGCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR TCA 90 bp AATTTCCCAAACACCCTTTCCACTACCCAAGCCCGTGGCCCTCAGAGAGAACCGTGCATGAGGTGCCAGTaGATTCGAAGAGGGCCGGGA +
Preference number: 2 (lower is better)
Translates to: NFPNTLSTTQARGPQREPCMRCQ*IRRGPG
Trigger: TCCCGGCCCTCTTCGAATTCACTGGCACCTCATGCA...CGGTTCTCTCTGAGGGCCACGGGCTTGGGTAGTGGAAAGGGTGTTTGGGAAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR CCA 90 bp CCAGGGCAGCCCATGAGTGTATCTGGGACTCAAGCTGGAGTTTTCCAGGGGAGACCTCCCAAGGGCATTTaGGGGTTGTTCCCAGAGCAA +
Preference number: 2 (lower is better)
Translates to: PGQPMSVSGTQAGVFQGRPPKGI*GLFPEQ
Trigger: TTGCTCTGGGAACAACCCCCAAATGCCCTTGGGAGG...TCTCCCCTGGAAAACTCCAGCTTGAGTCCCAGATACACTCATGGGCTGCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR CCA 90 bp CAGGTCTGCCATCTTCCTCCGTGCTTTAATGCGCTTGTAGACATAGTCGGAGAAAAGCGGCCAGCCCCCTaGGTCACGTGCAGGTTGCCA +
Preference number: 2 (lower is better)
Translates to: QVCHLPPCFNALVDIVGEKRPAP*VTCRLP
Trigger: TGGCAACCTGCACGTGACCCAGGGGGCTGGCCGCTT...TTCTCCGACTATGTCTACAAGCGCATTAAAGCACGGAGGAAGATGGCAGACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523458.1
3UTR-3UTR GCA 90 bp ATCCAGCGTGCCTTCCTACACTTGCATGAGGTGCCAGTGAATTCGAAGAGGGCCACAGAACCCAAAGACTaGCTGCCTTCTCGGCAGACC +
Preference number: 2 (lower is better)
Translates to: IQRAFLHLHEVPVNSKRATEPKD*LPSRQT
Trigger: GGTCTGCCGAGAAGGCAGGCAGTCTTTGGGTTCTGT...GGCCCTCTTCGAATTCACTGGCACCTCATGCAAGTGTAGGAAGGCACGCTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR CCA 90 bp ATTTCCCAAACACCCTTTCCACTACCCAAGCCCGTGGCCCTCAGAGAGAACCGGGGATTCCCCAGAGCATaGAAGTCTGATCCCAGGTTG +
Preference number: 2 (lower is better)
Translates to: ISQTPFPLPKPVALRENRGFPRA*KSDPRL
Trigger: CAACCTGGGATCAGACTTCCATGCTCTGGGGAATCC...CCGGTTCTCTCTGAGGGCCACGGGCTTGGGTAGTGGAAAGGGTGTTTGGGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR TCA 90 bp GTGGACGCTCAGAAGCGAGTTTATGTGTGTCTTTTCCTCTATCTGCTGGCTGTGCCTAGGGAGCTGTGGTaGTGTGACAGCTGCCACAGC +
Preference number: 2 (lower is better)
Translates to: VDAQKRVYVCLFLYLLAVPRELW*CDSCHS
Trigger: GCTGTGGCAGCTGTCACATCACCACAGCTCCCTAGG...CACAGCCAGCAGATAGAGGAAAAGACACACATAAACTCGCTTCTGAGCGTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR TCA 90 bp CCAGGGCAGCCCATGAGTGTATCTGGGACTCAAGCTGGAGTTTTCCAGGGGAGACTTCTCAGGGATGAGTaGAAATCCAGGCTCAGGTGT +
Preference number: 2 (lower is better)
Translates to: PGQPMSVSGTQAGVFQGRLLRDE*KSRLRC
Trigger: ACACCTGAGCCTGGATTTTCACTCATCCCTGAGAAG...TCTCCCCTGGAAAACTCCAGCTTGAGTCCCAGATACACTCATGGGCTGCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR CCA 90 bp GAGGTGACCTCGCCGTGTTTAGAAGGAAGCGTCTTTAAGCTGTGGGTGCCCTCAGGCCTGAGCAAACACTaGCACAATCAAGCAGGTGGA +
Preference number: 2 (lower is better)
Translates to: EVTSPCLEGSVFKLWVPSGLSKH*HNQAGG
Trigger: TCCACCTGCTTGATTGTGCCAGTGTTTGCTCAGGCC...TGAGGGCACCCACAGCTTAAAGACGCTTCCTTCTAAACACGGCGAGGTCACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR CCA 90 bp CCAGGGCAGCCCATGAGTGTATCTGGGACTCAAGCTGGAGTTTTCCAGGGGAGAACAGGTGCTACCACTTaGATTCCCCAGAGCATGGAA +
Preference number: 2 (lower is better)
Translates to: PGQPMSVSGTQAGVFQGRTGATT*IPQSME
Trigger: TTCCATGCTCTGGGGAATCCAAGTGGTAGCACCTGT...TCTCCCCTGGAAAACTCCAGCTTGAGTCCCAGATACACTCATGGGCTGCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR TCA 90 bp TGTGCCAGGATCGAGAGAATCAAACACAAACTGCCTGTAAGAGAGGCCCTTCATGGAGCTGTGGTGATGTaGCAGCTGCCACAGCGGCTA +
Preference number: 2 (lower is better)
Translates to: CARIERIKHKLPVREALHGAVVM*QLPQRL
Trigger: TAGCCGCTGTGGCAGCTGTCACATCACCACAGCTCC...ATGAAGGGCCTCTCTTACAGGCAGTTTGTGTTTGATTCTCTCGATCCTGGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR TCA 90 bp GAATCAAAGGTTCTGGTGGAATGGTTCACTTCGGAAGTCCCAAGGGCAGTGCGGCTTTCAGGTGCCCCATaGGGAAGACTGCATCATGTC +
Preference number: 2 (lower is better)
Translates to: ESKVLVEWFTSEVPRAVRLSGAP*GRLHHV
Trigger: GACATGATGCAGTCTTCCTCATGGGGCACCTGAAAG...CCGCACTGCCCTTGGGACTTCCGAAGTGAACCATTCCACCAGAACCTTTGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR GCA 90 bp CCCATGAGGAAGACTGCATCATGTCACTTCCACTCACTTGGGGAGATTCTAGGACATTTGCTCTGTCCCTaGCTGGCCTTCCCAACCCAG +
Preference number: 2 (lower is better)
Translates to: PMRKTASCHFHSLGEILGHLLCP*LAFPTQ
Trigger: CTGGGTTGGGAAGGCCAGGCAGGGACAGAGCAAATG...TCCTAGAATCTCCCCAAGTGAGTGGAAGTGACATGATGCAGTCTTCCTCATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR GCA 90 bp ATTTCCCAAACACCCTTTCCACTACCCAAGCCCGTGGCCCTCAGAGAGAACCGGAATCCTGACTTGGGATaGCAGAAGCATGCCACTCTT +
Preference number: 2 (lower is better)
Translates to: ISQTPFPLPKPVALRENRNPDLG*QKHATL
Trigger: AAGAGTGGCATGCTTCTGGCATCCCAAGTCAGGATT...CCGGTTCTCTCTGAGGGCCACGGGCTTGGGTAGTGGAAAGGGTGTTTGGGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR GCA 90 bp AGAGGCTTCCTGAGCTCATGTTGTTCCTCCCAAGGGCATTTGGGGGTTGTTCCCACACAGGGTTACAGGTaGTACCACTTGGATTCCCCA +
Preference number: 2 (lower is better)
Translates to: RGFLSSCCSSQGHLGVVPTQGYR*YHLDSP
Trigger: TGGGGAATCCAAGTGGTAGCACCTGTAACCCTGTGT...GGGAACAACCCCCAAATGCCCTTGGGAGGAACAACATGAGCTCAGGAAGCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR GCA 90 bp ATCCAGCGTGCCTTCCTACACTTGCATGAGGTGCCAGTGAATTCGAAGAGGGCCGGCTGTGGCTGGTACTaGAACCTATCCCAAAGTAAC +
Preference number: 2 (lower is better)
Translates to: IQRAFLHLHEVPVNSKRAGCGWY*NLSQSN
Trigger: GTTACTTTGGGATAGGTTGCAGTACCAGCCACAGCC...GGCCCTCTTCGAATTCACTGGCACCTCATGCAAGTGTAGGAAGGCACGCTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR GCA 90 bp AGAGGCTTCCTGAGCTCATGTTGTTCCTCCCAAGGGCATTTGGGGGTTGTTCCCGTCTTTTCCTCTATCTaGTGGCTGTGGCTGGTACTG +
Preference number: 2 (lower is better)
Translates to: RGFLSSCCSSQGHLGVVPVFSSI*WLWLVL
Trigger: CAGTACCAGCCACAGCCAGCAGATAGAGGAAAAGAC...GGGAACAACCCCCAAATGCCCTTGGGAGGAACAACATGAGCTCAGGAAGCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR CCA 90 bp ATTTCCCAAACACCCTTTCCACTACCCAAGCCCGTGGCCCTCAGAGAGAACCGGTTGCATGCATGTAAATaGGGGGAGGGGAGTCAAACA +
Preference number: 2 (lower is better)
Translates to: ISQTPFPLPKPVALRENRLHACK*GEGSQT
Trigger: TGTTTGACTCCCCTCCCCCCATTTACATGCATGCAA...CCGGTTCTCTCTGAGGGCCACGGGCTTGGGTAGTGGAAAGGGTGTTTGGGAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR CCA 90 bp TGCCATCTTCCTCCGTGCTTTAATGCGCTTGTAGACATAGTCGGAGAACGGGCTTCTGCCGCAGACTGGTaGTTCTTGGCAGAGACGATC +
Preference number: 2 (lower is better)
Translates to: CHLPPCFNALVDIVGERASAADW*FLAETI
Trigger: GATCGTCTCTGCCAAGAACCACCAGTCTGCGGCAGA...AGCCCGTTCTCCGACTATGTCTACAAGCGCATTAAAGCACGGAGGAAGATGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523458.1
3UTR CAA 90 bp GAATGGTTCACTTCGGAAGTCCCAAGGGCAGTGCGGATGACCGATTaGGCCATGGAAGACTTATCTTCATGGCACAGAGAGGTTGTGCAG +
Preference number: 2 (lower is better)
Translates to: EWFTSEVPRAVRMTD*AMEDLSSWHREVVQ
Trigger: CTGCACAACCTCTCTGTGCCATGAAGATAAGTCTTCCATGGCCAAATCGGTCATCCGCACTGCCCTTGGGACTTCCGAAGTGAACCATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR TCA 90 bp ATCCAGCGTGCCTTCCTACACTTGCATGAGGTGCCAGTGAATTCGAAGAGGGCCTTTTGTTCATTTCCCTaGCGTCCCAGCTTGTCTGTC +
Preference number: 2 (lower is better)
Translates to: IQRAFLHLHEVPVNSKRAFCSFP*RPSLSV
Trigger: GACAGACAAGCTGGGACGTCAGGGAAATGAACAAAA...GGCCCTCTTCGAATTCACTGGCACCTCATGCAAGTGTAGGAAGGCACGCTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR TCA 90 bp GAGGTGACCTCGCCGTGTTTAGAAGGAAGCGTCTTTAAGCTGTGGGTGCCCTCAACTAAGAAAGAGGCCTaGGCAAACACTGGCACAATC +
Preference number: 2 (lower is better)
Translates to: EVTSPCLEGSVFKLWVPSTKKEA*ANTGTI
Trigger: GATTGTGCCAGTGTTTGCTCAGGCCTCTTTCTTAGT...TGAGGGCACCCACAGCTTAAAGACGCTTCCTTCTAAACACGGCGAGGTCACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR TCA 90 bp CTCCCTCTGCTCAAGACTGACTTTGGCTTTCCCAGTTCCCCACTTGACTTTCATGCAAAGACAGAAGAGTaGGAGGTGACCTCGCCGTGT +
Preference number: 2 (lower is better)
Translates to: LPLLKTDFGFPSSPLDFHAKTEE*EVTSPC
Trigger: ACACGGCGAGGTCACCTCTCACTCTTCTGTCTTTGC...ATGAAAGTCAAGTGGGGAACTGGGAAAGCCAAAGTCAGTCTTGAGCAGAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR GCA 90 bp GAATCAAAGGTTCTGGTGGAATGGTTCACTTCGGAAGTCCCAAGGGCAGTGCGGCCCCTTGTCATAAGATaGAGCACTACACACGCTCTC +
Preference number: 2 (lower is better)
Translates to: ESKVLVEWFTSEVPRAVRPLVIR*STTHAL
Trigger: GAGAGCGTGTGTAGTGCTGCATCTTATGACAAGGGG...CCGCACTGCCCTTGGGACTTCCGAAGTGAACCATTCCACCAGAACCTTTGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR GCA 90 bp CTGCTCTTCTCTTCAAAGCACTTAGTACACAGGGTTACAGGTGCTACCACTTGGCACCACGTGGGCCTGTaGTATGTTCTCAGCTGCTGG +
Preference number: 2 (lower is better)
Translates to: LLFSSKHLVHRVTGATTWHHVGL*YVLSCW
Trigger: CCAGCAGCTGAGAACATAGCACAGGCCCACGTGGTG...CCAAGTGGTAGCACCTGTAACCCTGTGTACTAAGTGCTTTGAAGAGAAGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR TCA 90 bp CTGCTCTTCTCTTCAAAGCACTTAGTACACAGGGTTACAGGTGCTACCACTTGGGCAAAGACAGAAGAGTaGGAGGTGACCTCGCCGTGT +
Preference number: 2 (lower is better)
Translates to: LLFSSKHLVHRVTGATTWAKTEE*EVTSPC
Trigger: ACACGGCGAGGTCACCTCTCACTCTTCTGTCTTTGC...CCAAGTGGTAGCACCTGTAACCCTGTGTACTAAGTGCTTTGAAGAGAAGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR GCA 90 bp ATTTCCCAAACACCCTTTCCACTACCCAAGCCCGTGGCCCTCAGAGAGAACCGGTCACCCCAAATAACCTaGGTCCCTTTTGTTCATTTC +
Preference number: 2 (lower is better)
Translates to: ISQTPFPLPKPVALRENRSPQIT*VPFVHF
Trigger: GAAATGAACAAAAGGGACGCAGGTTATTTGGGGTGA...CCGGTTCTCTCTGAGGGCCACGGGCTTGGGTAGTGGAAAGGGTGTTTGGGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR CCA 90 bp ATCCAGCGTGCCTTCCTACACTTGCATGAGGTGCCAGTGAATTCGAAGAGGGCCGCACAATCAAGCAGGTaGAAGAAATGGTTGGGTCTT +
Preference number: 2 (lower is better)
Translates to: IQRAFLHLHEVPVNSKRAAQSSR*KKWLGL
Trigger: AAGACCCAACCATTTCTTCCACCTGCTTGATTGTGC...GGCCCTCTTCGAATTCACTGGCACCTCATGCAAGTGTAGGAAGGCACGCTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR CCA 90 bp ATTTCCCAAACACCCTTTCCACTACCCAAGCCCGTGGCCCTCAGAGAGAACCGGAACTCCTATTTATCATaGATGTGCCAGGATCGAGAG +
Preference number: 2 (lower is better)
Translates to: ISQTPFPLPKPVALRENRNSYLS*MCQDRE
Trigger: CTCTCGATCCTGGCACATCCATGATAAATAGGAGTT...CCGGTTCTCTCTGAGGGCCACGGGCTTGGGTAGTGGAAAGGGTGTTTGGGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR TCA 90 bp ATCCAGCGTGCCTTCCTACACTTGCATGAGGTGCCAGTGAATTCGAAGAGGGCCGACTTGCTCCAAAACTaGATTTTCAGAAGCAGCATG +
Preference number: 2 (lower is better)
Translates to: IQRAFLHLHEVPVNSKRADLLQN*IFRSSM
Trigger: CATGCTGCTTCTGAAAATTCAGTTTTGGAGCAAGTC...GGCCCTCTTCGAATTCACTGGCACCTCATGCAAGTGTAGGAAGGCACGCTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR TCA 90 bp GAATCAAAGGTTCTGGTGGAATGGTTCACTTCGGAAGTCCCAAGGGCAGTGCGGCAGAGCATGGAAGTCTaGTCCCAGGTTGAACATATT +
Preference number: 2 (lower is better)
Translates to: ESKVLVEWFTSEVPRAVRQSMEV*SQVEHI
Trigger: AATATGTTCAACCTGGGATCAGACTTCCATGCTCTG...CCGCACTGCCCTTGGGACTTCCGAAGTGAACCATTCCACCAGAACCTTTGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR TCA 90 bp AATTTCCCAAACACCCTTTCCACTACCCAAGCCCGTGGCCCTCAGAGAGAACCGGTTAGTAATGGTAAGTaGAGAAAGAGAGGCTTCCTG +
Preference number: 2 (lower is better)
Translates to: NFPNTLSTTQARGPQREPVSNGK*RKRGFL
Trigger: CAGGAAGCCTCTCTTTCTTCACTTACCATTACTAAC...CGGTTCTCTCTGAGGGCCACGGGCTTGGGTAGTGGAAAGGGTGTTTGGGAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR GCA 90 bp GTGGACGCTCAGAAGCGAGTTTATGTGTGTCTTTTCCTCTATCTGCTGGCTGTGAAGAGAAGTGTCATTTaGTCTGTCCCTGCCTGGCCT +
Preference number: 2 (lower is better)
Translates to: VDAQKRVYVCLFLYLLAVKRSVI*SVPAWP
Trigger: AGGCCAGGCAGGGACAGAGCAAATGACACTTCTCTT...CACAGCCAGCAGATAGAGGAAAAGACACACATAAACTCGCTTCTGAGCGTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR GCA 90 bp GAATCAAAGGTTCTGGTGGAATGGTTCACTTCGGAAGTCCCAAGGGCAGTGCGGAAAATGTGCTCCCTCTaGTCAAGACTGACTTTGGCT +
Preference number: 2 (lower is better)
Translates to: ESKVLVEWFTSEVPRAVRKMCSL*SRLTLA
Trigger: AGCCAAAGTCAGTCTTGAGCAGAGGGAGCACATTTT...CCGCACTGCCCTTGGGACTTCCGAAGTGAACCATTCCACCAGAACCTTTGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR CCA 90 bp GAATCAAAGGTTCTGGTGGAATGGTTCACTTCGGAAGTCCCAAGGGCAGTGCGGGCACAATCAAGCAGGTaGAAGAAATGGTTGGGTCTT +
Preference number: 2 (lower is better)
Translates to: ESKVLVEWFTSEVPRAVRAQSSR*KKWLGL
Trigger: AAGACCCAACCATTTCTTCCACCTGCTTGATTGTGC...CCGCACTGCCCTTGGGACTTCCGAAGTGAACCATTCCACCAGAACCTTTGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR CAA 90 bp TTCCTCCCAAGGGCATTTGGGGGTTGTTCCCAGAGCAAGGAAATCTaGTGCAGAATCAAAGGTTCTGGTGGAATGGTTCACTTCGGAAGT +
Preference number: 2 (lower is better)
Translates to: FLPRAFGGCSQSKEI*CRIKGSGGMVHFGS
Trigger: ACTTCCGAAGTGAACCATTCCACCAGAACCTTTGATTCTGCACAAGATTTCCTTGCTCTGGGAACAACCCCCAAATGCCCTTGGGAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR TCA 90 bp CTCCCTCTGCTCAAGACTGACTTTGGCTTTCCCAGTTCCCCACTTGACTTTCATTTTTGTTCATTTCCCTaGCGTCCCAGCTTGTCTGTC +
Preference number: 2 (lower is better)
Translates to: LPLLKTDFGFPSSPLDFHFCSFP*RPSLSV
Trigger: GACAGACAAGCTGGGACGTCAGGGAAATGAACAAAA...ATGAAAGTCAAGTGGGGAACTGGGAAAGCCAAAGTCAGTCTTGAGCAGAGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR TCA 90 bp CCCATGAGGAAGACTGCATCATGTCACTTCCACTCACTTGGGGAGATTCTAGGATCTGAGCTAAAATCCTaGCTTGGGATGCCAGAAGCA +
Preference number: 2 (lower is better)
Translates to: PMRKTASCHFHSLGEILGSELKS*LGMPEA
Trigger: TGCTTCTGGCATCCCAAGTCAGGATTTTAGCTCAGA...TCCTAGAATCTCCCCAAGTGAGTGGAAGTGACATGATGCAGTCTTCCTCATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR GCA 90 bp CCCATGAGGAAGACTGCATCATGTCACTTCCACTCACTTGGGGAGATTCTAGGAAATCCTGACTTGGGATaGCAGAAGCATGCCACTCTT +
Preference number: 2 (lower is better)
Translates to: PMRKTASCHFHSLGEILGNPDLG*QKHATL
Trigger: AAGAGTGGCATGCTTCTGGCATCCCAAGTCAGGATT...TCCTAGAATCTCCCCAAGTGAGTGGAAGTGACATGATGCAGTCTTCCTCATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR GCA 90 bp CCAGGGCAGCCCATGAGTGTATCTGGGACTCAAGCTGGAGTTTTCCAGGGGAGATATTTATCATGGATGTaGCAGGATCGAGAGAATCAA +
Preference number: 2 (lower is better)
Translates to: PGQPMSVSGTQAGVFQGRYLSWM*QDRENQ
Trigger: TTGATTCTCTCGATCCTGGCACATCCATGATAAATA...TCTCCCCTGGAAAACTCCAGCTTGAGTCCCAGATACACTCATGGGCTGCCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR CCA 90 bp GTGGACGCTCAGAAGCGAGTTTATGTGTGTCTTTTCCTCTATCTGCTGGCTGTGGGGAAACAGGTGGTTTaGAATGGAAAGGTGGAACCA +
Preference number: 2 (lower is better)
Translates to: VDAQKRVYVCLFLYLLAVGKQVV*NGKVEP
Trigger: TGGTTCCACCTTTCCATTCCAAACCACCTGTTTCCC...CACAGCCAGCAGATAGAGGAAAAGACACACATAAACTCGCTTCTGAGCGTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR CCA 90 bp AATTTCCCAAACACCCTTTCCACTACCCAAGCCCGTGGCCCTCAGAGAGAACCGGGAAATCCTGTTCCTTaGCTATCTCCAAATTCCTTT +
Preference number: 2 (lower is better)
Translates to: NFPNTLSTTQARGPQREPGNPVP*LSPNSF
Trigger: AAAGGAATTTGGAGATAGCCAAGGAACAGGATTTCC...CGGTTCTCTCTGAGGGCCACGGGCTTGGGTAGTGGAAAGGGTGTTTGGGAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR CAA 90 bp GGCTTCTCAGGGATGAGTGAAAATCCAGGCTCAGGTGTCAGCCCTTaGTGGAAACATGACACTCTCAGTATAGACAGTCGTGAAGAACAA +
Preference number: 2 (lower is better)
Translates to: GFSGMSENPGSGVSP*WKHDTLSIDSREEQ
Trigger: TTGTTCTTCACGACTGTCTATACTGAGAGTGTCATGTTTCCACAAAGGGCTGACACCTGAGCCTGGATTTTCACTCATCCCTGAGAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR TCA 90 bp TCCCTCTGCTCAAGACTGACTTTGGCTTTCCCAGTTCCCCACTTGACTTTCATATCTGAGCTAAAATCCTaGCTTGGGATGCCAGAAGCA +
Preference number: 2 (lower is better)
Translates to: SLCSRLTLAFPVPHLTFISELKS*LGMPEA
Trigger: TGCTTCTGGCATCCCAAGTCAGGATTTTAGCTCAGA...TATGAAAGTCAAGTGGGGAACTGGGAAAGCCAAAGTCAGTCTTGAGCAGAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR TCA 90 bp CTCCCTCTGCTCAAGACTGACTTTGGCTTTCCCAGTTCCCCACTTGACTTTCATTCATTCTGCCTCATCTaGGCTAAAATCCTGACTTGG +
Preference number: 2 (lower is better)
Translates to: LPLLKTDFGFPSSPLDFHSFCLI*AKILTW
Trigger: CCAAGTCAGGATTTTAGCTCAGATGAGGCAGAATGA...ATGAAAGTCAAGTGGGGAACTGGGAAAGCCAAAGTCAGTCTTGAGCAGAGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR CCA 90 bp TGTGCCAGGATCGAGAGAATCAAACACAAACTGCCTGTAAGAGAGGCCCTTCATTTGCATGCATGTAAATaGGGGGAGGGGAGTCAAACA +
Preference number: 2 (lower is better)
Translates to: CARIERIKHKLPVREALHLHACK*GEGSQT
Trigger: TGTTTGACTCCCCTCCCCCCATTTACATGCATGCAA...ATGAAGGGCCTCTCTTACAGGCAGTTTGTGTTTGATTCTCTCGATCCTGGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR CCA 90 bp GAATCAAAGGTTCTGGTGGAATGGTTCACTTCGGAAGTCCCAAGGGCAGTGCGGGGAAATCCTGTTCCTTaGCTATCTCCAAATTCCTTT +
Preference number: 2 (lower is better)
Translates to: ESKVLVEWFTSEVPRAVRGNPVP*LSPNSF
Trigger: AAAGGAATTTGGAGATAGCCAAGGAACAGGATTTCC...CCGCACTGCCCTTGGGACTTCCGAAGTGAACCATTCCACCAGAACCTTTGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR TCA 90 bp CTGCTCTTCTCTTCAAAGCACTTAGTACACAGGGTTACAGGTGCTACCACTTGGTCCCAGTTCCCCACTTaGCTTTCATATAAGCTGAGA +
Preference number: 2 (lower is better)
Translates to: LLFSSKHLVHRVTGATTWSQFPT*LSYKLR
Trigger: TCTCAGCTTATATGAAAGTCAAGTGGGGAACTGGGA...CCAAGTGGTAGCACCTGTAACCCTGTGTACTAAGTGCTTTGAAGAGAAGAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR GCA 90 bp GTGGACGCTCAGAAGCGAGTTTATGTGTGTCTTTTCCTCTATCTGCTGGCTGTGTCACCCCAAATAACCTaGGTCCCTTTTGTTCATTTC +
Preference number: 2 (lower is better)
Translates to: VDAQKRVYVCLFLYLLAVSPQIT*VPFVHF
Trigger: GAAATGAACAAAAGGGACGCAGGTTATTTGGGGTGA...CACAGCCAGCAGATAGAGGAAAAGACACACATAAACTCGCTTCTGAGCGTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR CCA 90 bp CCCATGAGGAAGACTGCATCATGTCACTTCCACTCACTTGGGGAGATTCTAGGAAACTCCTATTTATCATaGATGTGCCAGGATCGAGAG +
Preference number: 2 (lower is better)
Translates to: PMRKTASCHFHSLGEILGNSYLS*MCQDRE
Trigger: CTCTCGATCCTGGCACATCCATGATAAATAGGAGTT...TCCTAGAATCTCCCCAAGTGAGTGGAAGTGACATGATGCAGTCTTCCTCATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR TCA 90 bp TCCCTCTGCTCAAGACTGACTTTGGCTTTCCCAGTTCCCCACTTGACTTTCATAAGGCTTGAGGCTTATTaGTTCTTTAGATCACAACCG +
Preference number: 2 (lower is better)
Translates to: SLCSRLTLAFPVPHLTFIRLEAY*FFRSQP
Trigger: CGGTTGTGATCTAAAGAATCAATAAGCCTCAAGCCT...TATGAAAGTCAAGTGGGGAACTGGGAAAGCCAAAGTCAGTCTTGAGCAGAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR GCA 90 bp GTTGTTCCCAGAGCAAGGAAATCTTGTGCAGAATCAAAGGTTCTGGTGGAATGGCCACTCTTCTCGGTTTaGAAAGACAGAAGAGTGAGA +
Preference number: 2 (lower is better)
Translates to: VVPRARKSCAESKVLVEWPLFSV*KDRRVR
Trigger: TCTCACTCTTCTGTCTTTGCAAACCGAGAAGAGTGG...CCATTCCACCAGAACCTTTGATTCTGCACAAGATTTCCTTGCTCTGGGAACAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR CCA 90 bp CTGCTCTTCTCTTCAAAGCACTTAGTACACAGGGTTACAGGTGCTACCACTTGGTATGTTCTCAGCTGCTaGCTTTTAAGAGCACCAAAG +
Preference number: 2 (lower is better)
Translates to: LLFSSKHLVHRVTGATTWYVLSC*LLRAPK
Trigger: CTTTGGTGCTCTTAAAAGCCAGCAGCTGAGAACATA...CCAAGTGGTAGCACCTGTAACCCTGTGTACTAAGTGCTTTGAAGAGAAGAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR CCA 90 bp TCCCTCTGCTCAAGACTGACTTTGGCTTTCCCAGTTCCCCACTTGACTTTCATATATGTTCTCAGCTGCTaGCTTTTAAGAGCACCAAAG +
Preference number: 2 (lower is better)
Translates to: SLCSRLTLAFPVPHLTFIYVLSC*LLRAPK
Trigger: CTTTGGTGCTCTTAAAAGCCAGCAGCTGAGAACATA...TATGAAAGTCAAGTGGGGAACTGGGAAAGCCAAAGTCAGTCTTGAGCAGAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR CCA 90 bp CCCATGAGGAAGACTGCATCATGTCACTTCCACTCACTTGGGGAGATTCTAGGAATCGGTGTACCATTTTaGCTTCAAAACAATCTCTTC +
Preference number: 2 (lower is better)
Translates to: PMRKTASCHFHSLGEILGIGVPF*LQNNLF
Trigger: GAAGAGATTGTTTTGAAGCCAAAATGGTACACCGAT...TCCTAGAATCTCCCCAAGTGAGTGGAAGTGACATGATGCAGTCTTCCTCATGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR CCA 90 bp GTTGTTCCCAGAGCAAGGAAATCTTGTGCAGAATCAAAGGTTCTGGTGGAATGGAGCAGGTGGAAGAAATaGTTGGGTCTTGGCATTTTA +
Preference number: 2 (lower is better)
Translates to: VVPRARKSCAESKVLVEWSRWKK*LGLGIL
Trigger: TAAAATGCCAAGACCCAACCATTTCTTCCACCTGCT...CCATTCCACCAGAACCTTTGATTCTGCACAAGATTTCCTTGCTCTGGGAACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR GCA 90 bp GAAGACTGCATCATGTCACTTCCACTCACTTGGGGAGATTCTAGGACTGAGACATATTTATCATGGATGTaGCAGGATCGAGAGAATCAA +
Preference number: 2 (lower is better)
Translates to: EDCIMSLPLTWGDSRTETYLSWM*QDRENQ
Trigger: TTGATTCTCTCGATCCTGGCACATCCATGATAAATA...TGTCTCAGTCCTAGAATCTCCCCAAGTGAGTGGAAGTGACATGATGCAGTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR TCA 90 bp AAACAAAGCAATATTCGTAAAGCTAGGCAAGCGAGCGTAACATTGGAGAAACATAGGCTTGAGGCTTATTaGTTCTTTAGATCACAACCG +
Preference number: 2 (lower is better)
Translates to: KQSNIRKARQASVTLEKHRLEAY*FFRSQP
Trigger: CGGTTGTGATCTAAAGAATCAATAAGCCTCAAGCCT...ATGTTTCTCCAATGTTACGCTCGCTTGCCTAGCTTTACGAATATTGCTTTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
3UTR-3UTR CCA 90 bp AGAAAACAAAGCAATATTCGTAAAGCTAGGCAAGCGAGCGTAACATTGGAGAAAATCGGTGTACCATTTTaGCTTCAAAACAATCTCTTC +
Preference number: 2 (lower is better)
Translates to: RKQSNIRKARQASVTLEKIGVPF*LQNNLF
Trigger: GAAGAGATTGTTTTGAAGCCAAAATGGTACACCGAT...TTTCTCCAATGTTACGCTCGCTTGCCTAGCTTTACGAATATTGCTTTGTTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
3UTR TCA 72 bp GCTTGTAGACATAGTCGGAGAACGGGCTGCAGGGTATaGAGCGGCCAGCCCCCTGGGTCACGTGCAGGTTGC +
Preference number: 3 (lower is better)
Translates to: ACRHSRRTGCRV*SGQPPGSRAGC
Trigger: GCAACCTGCACGTGACCCAGGGGGCTGGCCGCTTCATACCCTGCAGCCCGTTCTCCGACTATGTCTACAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523458.1
3UTR-3UTR CAA 90 bp GGGCTGCAGGGTATGAAGCGGCCAGCCCCCTGGGTCACGTGCAGGTTGCCATCTGCAGACTGGTGGTTCTaGGCAGAGACGATCTTCACA +
Preference number: 3 (lower is better)
Translates to: GLQGMKRPAPWVTCRLPSADWWF*AETIFT
Trigger: TGTGAAGATCGTCTCTGCCAAGAACCACCAGTCTGC...AGATGGCAACCTGCACGTGACCCAGGGGGCTGGCCGCTTCATACCCTGCAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523458.1
3UTR TCA 72 bp CTGCCTGCCTTCTCGGCAGACCCTAGGGAGCTGTGGTaGTGTGACAGCTGCCACAGCGGCTATCTTCCATGG +
Preference number: 3 (lower is better)
Translates to: LPAFSADPRELW*CDSCHSGYLPW
Trigger: CCATGGAAGATAGCCGCTGTGGCAGCTGTCACATCACCACAGCTCCCTAGGGTCTGCCGAGAAGGCAGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR CAA 90 bp AATTTCCCAAACACCCTTTCCACTACCCAAGCCCGTGGCCCTCAGAGAGAACCGTCTGCACCCTCCACCTaGCTCCAGGCTCCCACCACC +
Preference number: 3 (lower is better)
Translates to: NFPNTLSTTQARGPQREPSAPST*LQAPTT
Trigger: GGTGGTGGGAGCCTGGAGCAAGGTGGAGGGTGCAGA...CGGTTCTCTCTGAGGGCCACGGGCTTGGGTAGTGGAAAGGGTGTTTGGGAAATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR GCA 72 bp CTCCAGGCTCCCACCACCCACTCACCCCAAATAACCTaGGTCCCTTTTGTTCATTTCCCTGACGTCCCAGCT +
Preference number: 3 (lower is better)
Translates to: LQAPTTHSPQIT*VPFVHFPDVPA
Trigger: AGCTGGGACGTCAGGGAAATGAACAAAAGGGACGCAGGTTATTTGGGGTGAGTGGGTGGTGGGAGCCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR CCA 72 bp ACTACCCAAGCCCGTGGCCCTCAGAGAGAACCGGGATaGATTGCCATCTGGGTTCAGAGGCAATATGAGGAG +
Preference number: 3 (lower is better)
Translates to: TTQARGPQREPG*IAIWVQRQYEE
Trigger: CTCCTCATATTGCCTCTGAACCCAGATGGCAATCCATCCCGGTTCTCTCTGAGGGCCACGGGCTTGGGTAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR CAA 90 bp AGAGGCTTCCTGAGCTCATGTTGTTCCTCCCAAGGGCATTTGGGGGTTGTTCCCGAAGAGAAGTGTCATTaGCTCTGTCCCTGCCTGGCC +
Preference number: 3 (lower is better)
Translates to: RGFLSSCCSSQGHLGVVPEEKCH*LCPCLA
Trigger: GGCCAGGCAGGGACAGAGCAAATGACACTTCTCTTC...GGGAACAACCCCCAAATGCCCTTGGGAGGAACAACATGAGCTCAGGAAGCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR CAA 90 bp CCAGGGCAGCCCATGAGTGTATCTGGGACTCAAGCTGGAGTTTTCCAGGGGAGACGTGCCTTCCTACACTaGCATGAGGTGCCAGTGAAT +
Preference number: 3 (lower is better)
Translates to: PGQPMSVSGTQAGVFQGRRAFLH*HEVPVN
Trigger: ATTCACTGGCACCTCATGCAAGTGTAGGAAGGCACG...TCTCCCCTGGAAAACTCCAGCTTGAGTCCCAGATACACTCATGGGCTGCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR TCA 72 bp CAGATAGACGATCCAGCGTGCCTTCCTACACTTGCATaGGGTGCCAGTGAATTCGAAGAGGGCCGGGACTCA +
Preference number: 3 (lower is better)
Translates to: QIDDPACLPTLA*GASEFEEGRDS
Trigger: TGAGTCCCGGCCCTCTTCGAATTCACTGGCACCTCATGCAAGTGTAGGAAGGCACGCTGGATCGTCTATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR CCA 72 bp ACCTCGCCGTGTTTAGAAGGAAGCGTCTTTAAGCTGTaGGTGCCCTCACCACGTGGGCCTGTGCTATGTTCT +
Preference number: 3 (lower is better)
Translates to: TSPCLEGSVFKL*VPSPRGPVLCS
Trigger: AGAACATAGCACAGGCCCACGTGGTGAGGGCACCCACAGCTTAAAGACGCTTCCTTCTAAACACGGCGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR CCA 72 bp CAATTTCCCAAACACCCTTTCCACTACCCAAGCCCGTaGCCCTCAGAGAGAACCGGGATGGATTGCCATCTG +
Preference number: 3 (lower is better)
Translates to: QFPKHPFHYPSP*PSERTGMDCHL
Trigger: CAGATGGCAATCCATCCCGGTTCTCTCTGAGGGCCACGGGCTTGGGTAGTGGAAAGGGTGTTTGGGAAATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR CAA 90 bp AGAGGCTTCCTGAGCTCATGTTGTTCCTCCCAAGGGCATTTGGGGGTTGTTCCCGGGGAAACAGGTGGTTaGGAATGGAAAGGTGGAACC +
Preference number: 3 (lower is better)
Translates to: RGFLSSCCSSQGHLGVVPGETGG*EWKGGT
Trigger: GGTTCCACCTTTCCATTCCAAACCACCTGTTTCCCC...GGGAACAACCCCCAAATGCCCTTGGGAGGAACAACATGAGCTCAGGAAGCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR CAA 90 bp AGAGGCTTCCTGAGCTCATGTTGTTCCTCCCAAGGGCATTTGGGGGTTGTTCCCTACAGGTGCTACCACTaGGATTCCCCAGAGCATGGA +
Preference number: 3 (lower is better)
Translates to: RGFLSSCCSSQGHLGVVPYRCYH*DSPEHG
Trigger: TCCATGCTCTGGGGAATCCAAGTGGTAGCACCTGTA...GGGAACAACCCCCAAATGCCCTTGGGAGGAACAACATGAGCTCAGGAAGCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR CAA 90 bp CCAGGGCAGCCCATGAGTGTATCTGGGACTCAAGCTGGAGTTTTCCAGGGGAGAAAGGGCATTTGGGGGTaGTTCCCAGAGCAAGGAAAT +
Preference number: 3 (lower is better)
Translates to: PGQPMSVSGTQAGVFQGRKGIWG*FPEQGN
Trigger: ATTTCCTTGCTCTGGGAACAACCCCCAAATGCCCTT...TCTCCCCTGGAAAACTCCAGCTTGAGTCCCAGATACACTCATGGGCTGCCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR TCA 72 bp TCCAGCGTGCCTTCCTACACTTGCATGAGGTGCCAGTaGATTCGAAGAGGGCCGGGACTCACCATTGTTTTC +
Preference number: 3 (lower is better)
Translates to: SSVPSYTCMRCQ*IRRGPGLTIVF
Trigger: GAAAACAATGGTGAGTCCCGGCCCTCTTCGAATTCACTGGCACCTCATGCAAGTGTAGGAAGGCACGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR TCA 72 bp TGCCCACCCTACTGGAAAGGGCTTCTCAGGGATGAGTaGAAATCCAGGCTCAGGTGTCAGCCCTTTGTGGAA +
Preference number: 3 (lower is better)
Translates to: CPPYWKGLLRDE*KSRLRCQPFVE
Trigger: TTCCACAAAGGGCTGACACCTGAGCCTGGATTTTCACTCATCCCTGAGAAGCCCTTTCCAGTAGGGTGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR GCA 72 bp ACTTGGGATGCCAGAAGCATGCCACTCTTCTCGGTTTaGAAAGACAGAAGAGTGAGAGGTGACCTCGCCGTG +
Preference number: 3 (lower is better)
Translates to: TWDARSMPLFSV*KDRRVRGDLAV
Trigger: CACGGCGAGGTCACCTCTCACTCTTCTGTCTTTGCAAACCGAGAAGAGTGGCATGCTTCTGGCATCCCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR CAA 90 bp AGAGGCTTCCTGAGCTCATGTTGTTCCTCCCAAGGGCATTTGGGGGTTGTTCCCGTGCGGATGACCGATTaGGCCATGGAAGACTTATCT +
Preference number: 3 (lower is better)
Translates to: RGFLSSCCSSQGHLGVVPVRMTD*AMEDLS
Trigger: AGATAAGTCTTCCATGGCCAAATCGGTCATCCGCAC...GGGAACAACCCCCAAATGCCCTTGGGAGGAACAACATGAGCTCAGGAAGCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR CAA 90 bp ATCCAGCGTGCCTTCCTACACTTGCATGAGGTGCCAGTGAATTCGAAGAGGGCCAAGGGCATTTGGGGGTaGTTCCCAGAGCAAGGAAAT +
Preference number: 3 (lower is better)
Translates to: IQRAFLHLHEVPVNSKRAKGIWG*FPEQGN
Trigger: ATTTCCTTGCTCTGGGAACAACCCCCAAATGCCCTT...GGCCCTCTTCGAATTCACTGGCACCTCATGCAAGTGTAGGAAGGCACGCTGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR CAA 90 bp ATTTCCCAAACACCCTTTCCACTACCCAAGCCCGTGGCCCTCAGAGAGAACCGGGGCCGGGACTCACCATaGTTTTCTTTTCCTAAACCT +
Preference number: 3 (lower is better)
Translates to: ISQTPFPLPKPVALRENRGRDSP*FSFPKP
Trigger: AGGTTTAGGAAAAGAAAACAATGGTGAGTCCCGGCC...CCGGTTCTCTCTGAGGGCCACGGGCTTGGGTAGTGGAAAGGGTGTTTGGGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR TCA 72 bp GCATGCCACTCTTCTCGGTTTGCAAAGACAGAAGAGTaGGAGGTGACCTCGCCGTGTTTAGAAGGAAGCGTC +
Preference number: 3 (lower is better)
Translates to: ACHSSRFAKTEE*EVTSPCLEGSV
Trigger: GACGCTTCCTTCTAAACACGGCGAGGTCACCTCTCACTCTTCTGTCTTTGCAAACCGAGAAGAGTGGCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR TCA 72 bp GAGGCCCTTCATTCTGCCTCATCTGAGCTAAAATCCTaGCTTGGGATGCCAGAAGCATGCCACTCTTCTCGG +
Preference number: 3 (lower is better)
Translates to: EALHSASSELKS*LGMPEACHSSR
Trigger: CCGAGAAGAGTGGCATGCTTCTGGCATCCCAAGTCAGGATTTTAGCTCAGATGAGGCAGAATGAAGGGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR CAA 90 bp GTGGACGCTCAGAAGCGAGTTTATGTGTGTCTTTTCCTCTATCTGCTGGCTGTGGGGGAAACAGGTGGTTaGGAATGGAAAGGTGGAACC +
Preference number: 3 (lower is better)
Translates to: VDAQKRVYVCLFLYLLAVGETGG*EWKGGT
Trigger: GGTTCCACCTTTCCATTCCAAACCACCTGTTTCCCC...CACAGCCAGCAGATAGAGGAAAAGACACACATAAACTCGCTTCTGAGCGTCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR CAA 90 bp CCAGGGCAGCCCATGAGTGTATCTGGGACTCAAGCTGGAGTTTTCCAGGGGAGAAAGACCCCCACATCTTaGAAGTGTAAACTAAGAGCT +
Preference number: 3 (lower is better)
Translates to: PGQPMSVSGTQAGVFQGRKTPTS*KCKLRA
Trigger: AGCTCTTAGTTTACACTTCAAAGATGTGGGGGTCTT...TCTCCCCTGGAAAACTCCAGCTTGAGTCCCAGATACACTCATGGGCTGCCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR CAA 90 bp ATTTCCCAAACACCCTTTCCACTACCCAAGCCCGTGGCCCTCAGAGAGAACCGGCAGAGCAAGGAAATCTaGTGCAGAATCAAAGGTTCT +
Preference number: 3 (lower is better)
Translates to: ISQTPFPLPKPVALRENRQSKEI*CRIKGS
Trigger: AGAACCTTTGATTCTGCACAAGATTTCCTTGCTCTG...CCGGTTCTCTCTGAGGGCCACGGGCTTGGGTAGTGGAAAGGGTGTTTGGGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR CAA 90 bp TACTCTGCCGCAGACTGGTGGTTCTTGGCAGAGACGATCTTCACAGCATCTGGAACAGATATTCTTCCCTaGCGGGGATACAGGTTGAAG +
Preference number: 3 (lower is better)
Translates to: YSAADWWFLAETIFTASGTDILP*RGYRLK
Trigger: CTTCAACCTGTATCCCCGCAAGGGAAGAATATCTGT...TCCAGATGCTGTGAAGATCGTCTCTGCCAAGAACCACCAGTCTGCGGCAGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523458.1
3UTR-3UTR CAA 90 bp CCGTGCTTTAATGCGCTTGTAGACATAGTCGGAGAACGGGCTGCAGGGTATGAAATCCCTTCAAAGATGTaGTACTCTGCCGCAGACTGG +
Preference number: 3 (lower is better)
Translates to: PCFNALVDIVGERAAGYEIPSKM*YSAADW
Trigger: CCAGTCTGCGGCAGAGTACAACATCTTTGAAGGGAT...TTCATACCCTGCAGCCCGTTCTCCGACTATGTCTACAAGCGCATTAAAGCACGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523458.1
3UTR TCA 72 bp AATGGTTCACTTCGGAAGTCCCAAGGGCAGTGCGGATaGCCGATTTGGCCATGGAAGACTTATCTTCATGGC +
Preference number: 3 (lower is better)
Translates to: NGSLRKSQGQCG*PIWPWKTYLHG
Trigger: GCCATGAAGATAAGTCTTCCATGGCCAAATCGGTCATCCGCACTGCCCTTGGGACTTCCGAAGTGAACCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR TCA 72 bp TGGCAGAGACGATCTTCACAGCATCTGGATCCCAGATaGCGAGGTCGCTGTCAGAACCCACAGATATTCTTC +
Preference number: 3 (lower is better)
Translates to: WQRRSSQHLDPR*RGRCQNPQIFF
Trigger: GAAGAATATCTGTGGGTTCTGACAGCGACCTCGTCATCTGGGATCCAGATGCTGTGAAGATCGTCTCTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523458.1
3UTR CCA 72 bp CAAAGATGTTGTACTCTGCCGCAGACTGGTGGTTCTTaGCAGAGACGATCTTCACAGCATCTGGATCCCAGA +
Preference number: 3 (lower is better)
Translates to: QRCCTLPQTGGS*QRRSSQHLDPR
Trigger: TCTGGGATCCAGATGCTGTGAAGATCGTCTCTGCCAAGAACCACCAGTCTGCGGCAGAGTACAACATCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523458.1
3UTR-3UTR CAA 90 bp GAAGACTGCATCATGTCACTTCCACTCACTTGGGGAGATTCTAGGACTGAGACATGCTCAAGACTGACTTaGGCTTTCCCAGTTCCCCAC +
Preference number: 3 (lower is better)
Translates to: EDCIMSLPLTWGDSRTETCSRLT*AFPVPH
Trigger: GTGGGGAACTGGGAAAGCCAAAGTCAGTCTTGAGCA...TGTCTCAGTCCTAGAATCTCCCCAAGTGAGTGGAAGTGACATGATGCAGTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR GCA 72 bp CTGACGTCCCAGCTTGTCTGTCCCCTTGTCATAAGATaGAGCACTACACACGCTCTCAACACTATGATAGAG +
Preference number: 3 (lower is better)
Translates to: LTSQLVCPLVIR*STTHALNTMIE
Trigger: CTCTATCATAGTGTTGAGAGCGTGTGTAGTGCTGCATCTTATGACAAGGGGACAGACAAGCTGGGACGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR GCA 72 bp CAGTTTTCAAAGAGGGAACTTACAATGAATGCTGGCTaGCCAGGGCAGCCCATGAGTGTATCTGGGACTCAA +
Preference number: 3 (lower is better)
Translates to: QFSKRELTMNAG*PGQPMSVSGTQ
Trigger: TTGAGTCCCAGATACACTCATGGGCTGCCCTGGGCAGCCAGCATTCATTGTAAGTTCCCTCTTTGAAAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR GCA 72 bp ACGGTTCAAACCAAACAGCTCTTCACGTTCCAGAGCTaGCTCACAGCTAGCACAGATCACAGGAGATTACTG +
Preference number: 3 (lower is better)
Translates to: TVQTKQLFTFQS*LTASTDHRRLL
Trigger: CAGTAATCTCCTGTGATCTGTGCTAGCTGTGAGGCAGCTCTGGAACGTGAAGAGCTGTTTGGTTTGAACCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR CCA 72 bp CATGAGGAAGACTGCATCATGTCACTTCCACTCACTTaGGGAGATTCTAGGACTGAGACACAAAGTTCCCCC +
Preference number: 3 (lower is better)
Translates to: HEEDCIMSLPLT*GDSRTETQSSP
Trigger: GGGGGAACTTTGTGTCTCAGTCCTAGAATCTCCCCAAGTGAGTGGAAGTGACATGATGCAGTCTTCCTCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR CCA 72 bp AGGAAATCTTGTGCAGAATCAAAGGTTCTGGTGGAATaGTTCACTTCGGAAGTCCCAAGGGCAGTGCGGATG +
Preference number: 3 (lower is better)
Translates to: RKSCAESKVLVE*FTSEVPRAVRM
Trigger: CATCCGCACTGCCCTTGGGACTTCCGAAGTGAACCATTCCACCAGAACCTTTGATTCTGCACAAGATTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR CCA 72 bp GAGCAAGGAAATCTTGTGCAGAATCAAAGGTTCTGGTaGAATGGTTCACTTCGGAAGTCCCAAGGGCAGTGC +
Preference number: 3 (lower is better)
Translates to: EQGNLVQNQRFW*NGSLRKSQGQC
Trigger: GCACTGCCCTTGGGACTTCCGAAGTGAACCATTCCACCAGAACCTTTGATTCTGCACAAGATTTCCTTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR CCA 72 bp CCAGAGCAAGGAAATCTTGTGCAGAATCAAAGGTTCTaGTGGAATGGTTCACTTCGGAAGTCCCAAGGGCAG +
Preference number: 3 (lower is better)
Translates to: PEQGNLVQNQRF*WNGSLRKSQGQ
Trigger: CTGCCCTTGGGACTTCCGAAGTGAACCATTCCACCAGAACCTTTGATTCTGCACAAGATTTCCTTGCTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR CAA 90 bp GAAGACTGCATCATGTCACTTCCACTCACTTGGGGAGATTCTAGGACTGAGACAGCCACTCTTCTCGGTTaGCAAAGACAGAAGAGTGAG +
Preference number: 3 (lower is better)
Translates to: EDCIMSLPLTWGDSRTETATLLG*QRQKSE
Trigger: CTCACTCTTCTGTCTTTGCAAACCGAGAAGAGTGGC...TGTCTCAGTCCTAGAATCTCCCCAAGTGAGTGGAAGTGACATGATGCAGTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR CAA 90 bp GAATCAAAGGTTCTGGTGGAATGGTTCACTTCGGAAGTCCCAAGGGCAGTGCGGAAGACCCCCACATCTTaGAAGTGTAAACTAAGAGCT +
Preference number: 3 (lower is better)
Translates to: ESKVLVEWFTSEVPRAVRKTPTS*KCKLRA
Trigger: AGCTCTTAGTTTACACTTCAAAGATGTGGGGGTCTT...CCGCACTGCCCTTGGGACTTCCGAAGTGAACCATTCCACCAGAACCTTTGATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR GCA 72 bp CTTCTCTTCAAAGCACTTAGTACACAGGGTTACAGGTaGTACCACTTGGATTCCCCAGAGCATGGAAGTCTG +
Preference number: 3 (lower is better)
Translates to: LLFKALSTQGYR*YHLDSPEHGSL
Trigger: CAGACTTCCATGCTCTGGGGAATCCAAGTGGTAGCACCTGTAACCCTGTGTACTAAGTGCTTTGAAGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR CCA 72 bp GGGTTACAGGTGCTACCACTTGGATTCCCCAGAGCATaGAAGTCTGATCCCAGGTTGAACATATTTCTTCTG +
Preference number: 3 (lower is better)
Translates to: GLQVLPLGFPRA*KSDPRLNIFLL
Trigger: CAGAAGAAATATGTTCAACCTGGGATCAGACTTCCATGCTCTGGGGAATCCAAGTGGTAGCACCTGTAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR CAA 90 bp CAGAGAGGTTGTGCAGAGATGAGTCAGACTCAGGGGCTGAGTAACAGCAGAGCATTAGATCACAACCGTTaGGATTCGCTTTCCTTCTTA +
Preference number: 3 (lower is better)
Translates to: QRGCAEMSQTQGLSNSRALDHNR*DSLSFL
Trigger: TAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAA...TGCTCTGCTGTTACTCAGCCCCTGAGTCTGACTCATCTCTGCACAACCTCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR GCA 72 bp CACACTAATTTCTTTCAGGTGCCCCATGAGGAAGACTaGATCATGTCACTTCCACTCACTTGGGGAGATTCT +
Preference number: 3 (lower is better)
Translates to: HTNFFQVPHEED*IMSLPLTWGDS
Trigger: AGAATCTCCCCAAGTGAGTGGAAGTGACATGATGCAGTCTTCCTCATGGGGCACCTGAAAGAAATTAGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR GCA 72 bp GCATTTGGGGGTTGTTCCCAGAGCAAGGAAATCTTGTaGAGAATCAAAGGTTCTGGTGGAATGGTTCACTTC +
Preference number: 3 (lower is better)
Translates to: AFGGCSQSKEIL*RIKGSGGMVHF
Trigger: GAAGTGAACCATTCCACCAGAACCTTTGATTCTGCACAAGATTTCCTTGCTCTGGGAACAACCCCCAAATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR CAA 90 bp GTTGTTCCCAGAGCAAGGAAATCTTGTGCAGAATCAAAGGTTCTGGTGGAATGGGGGAAATCCTGTTCCTaGGCTATCTCCAAATTCCTT +
Preference number: 3 (lower is better)
Translates to: VVPRARKSCAESKVLVEWGKSCS*AISKFL
Trigger: AAGGAATTTGGAGATAGCCAAGGAACAGGATTTCCC...CCATTCCACCAGAACCTTTGATTCTGCACAAGATTTCCTTGCTCTGGGAACAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR CAA 90 bp CTCCCTCTGCTCAAGACTGACTTTGGCTTTCCCAGTTCCCCACTTGACTTTCATTATCGGTGTACCATTTaGGCTTCAAAACAATCTCTT +
Preference number: 3 (lower is better)
Translates to: LPLLKTDFGFPSSPLDFHYRCTI*ASKQSL
Trigger: AAGAGATTGTTTTGAAGCCAAAATGGTACACCGATA...ATGAAAGTCAAGTGGGGAACTGGGAAAGCCAAAGTCAGTCTTGAGCAGAGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR CAA 90 bp CTGCTCTTCTCTTCAAAGCACTTAGTACACAGGGTTACAGGTGCTACCACTTGGTTAGATCACAACCGTTaGGATTCGCTTTCCTTCTTA +
Preference number: 3 (lower is better)
Translates to: LLFSSKHLVHRVTGATTWLDHNR*DSLSFL
Trigger: TAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAA...CCAAGTGGTAGCACCTGTAACCCTGTGTACTAAGTGCTTTGAAGAGAAGAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR TCA 72 bp AGAGAAGGATTTGAAAGCAACACTAAGAAAGAGGCCTaGGCAAACACTGGCACAATCAAGCAGGTGGAAGAA +
Preference number: 3 (lower is better)
Translates to: REGFESNTKKEA*ANTGTIKQVEE
Trigger: TTCTTCCACCTGCTTGATTGTGCCAGTGTTTGCTCAGGCCTCTTTCTTAGTGTTGCTTTCAAATCCTTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR CAA 90 bp CTGCTCTTCTCTTCAAAGCACTTAGTACACAGGGTTACAGGTGCTACCACTTGGTATCGGTGTACCATTTaGGCTTCAAAACAATCTCTT +
Preference number: 3 (lower is better)
Translates to: LLFSSKHLVHRVTGATTWYRCTI*ASKQSL
Trigger: AAGAGATTGTTTTGAAGCCAAAATGGTACACCGATA...CCAAGTGGTAGCACCTGTAACCCTGTGTACTAAGTGCTTTGAAGAGAAGAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR CCA 72 bp GAGCAAACACTGGCACAATCAAGCAGGTGGAAGAAATaGTTGGGTCTTGGCATTTTAATAAACGTTCAAAGA +
Preference number: 3 (lower is better)
Translates to: EQTLAQSSRWKK*LGLGILINVQR
Trigger: TCTTTGAACGTTTATTAAAATGCCAAGACCCAACCATTTCTTCCACCTGCTTGATTGTGCCAGTGTTTGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR-3UTR CAA 90 bp AAACAAAGCAATATTCGTAAAGCTAGGCAAGCGAGCGTAACATTGGAGAAACATTTAGATCACAACCGTTaGGATTCGCTTTCCTTCTTA +
Preference number: 3 (lower is better)
Translates to: KQSNIRKARQASVTLEKHLDHNR*DSLSFL
Trigger: TAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAA...ATGTTTCTCCAATGTTACGCTCGCTTGCCTAGCTTTACGAATATTGCTTTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
3UTR TCA 72 bp AGATTCTTATCTTGCTCACAGGACTTGCTCCAAAACTaGATTTTCAGAAGCAGCATGATAGGGAAAGAGATA +
Preference number: 3 (lower is better)
Translates to: RFLSCSQDLLQN*IFRSSMIGKEI
Trigger: TATCTCTTTCCCTATCATGCTGCTTCTGAAAATTCAGTTTTGGAGCAAGTCCTGTGAGCAAGATAAGAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR TCA 72 bp CTTAGAAGTACAAGAAATAGCTCTACTACGGGTAACTaGTTTAACAATTTCCCAAACACCCTTTCCACTACC +
Preference number: 3 (lower is better)
Translates to: LRSTRNSSTTGN*FNNFPNTLSTT
Trigger: GGTAGTGGAAAGGGTGTTTGGGAAATTGTTAAATCAGTTACCCGTAGTAGAGCTATTTCTTGTACTTCTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR GCA 72 bp AAACCAACTTTCAAAAACTCCTATTTATCATGGATGTaGCAGGATCGAGAGAATCAAACACAAACTGCCTGT +
Preference number: 3 (lower is better)
Translates to: KPTFKNSYLSWM*QDRENQTQTAC
Trigger: ACAGGCAGTTTGTGTTTGATTCTCTCGATCCTGGCACATCCATGATAAATAGGAGTTTTTGAAAGTTGGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp GGGCTGCAGGGTATGAAGCGGCCAGCCCCCTGGGTCACGTGCAGGTTGCCATCTACGGGCTGCAGGGTATaGAGCGGCCAGCCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: GLQGMKRPAPWVTCRLPSTGCRV*SGQPPG
Trigger: CCCAGGGGGCTGGCCGCTTCATACCCTGCAGCCCGT...AGATGGCAACCTGCACGTGACCCAGGGGGCTGGCCGCTTCATACCCTGCAGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000523458.1
CDS-3UTR GCA 90 bp GGGCTGCAGGGTATGAAGCGGCCAGCCCCCTGGGTCACGTGCAGGTTGCCATCTGCCCCCTGGGTCACGTaGAGGTTGCCATCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: GLQGMKRPAPWVTCRLPSAPWVT*RLPSSS
Trigger: GCTGGAAGATGGCAACCTGCACGTGACCCAGGGGGC...AGATGGCAACCTGCACGTGACCCAGGGGGCTGGCCGCTTCATACCCTGCAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000523458.1
CDS-3UTR GCA 90 bp CCAGGGCAGCCCATGAGTGTATCTGGGACTCAAGCTGGAGTTTTCCAGGGGAGAGTCTTCGCGCCCCGCTaGCCCACGCTGAGGGCATCG +
Preference number: 4 (lower is better)
Translates to: PGQPMSVSGTQAGVFQGRVFAPR*PTLRAS
Trigger: CGATGCCCTCAGCGTGGGGCAGCGGGGCGCGAAGAC...TCTCCCCTGGAAAACTCCAGCTTGAGTCCCAGATACACTCATGGGCTGCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000343218.10
CDS-3UTR GCA 90 bp ATCCAGCGTGCCTTCCTACACTTGCATGAGGTGCCAGTGAATTCGAAGAGGGCCCGGGCGCGGGCTCCCTaGTCTCTTCCCGGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: IQRAFLHLHEVPVNSKRARARAP*SLPGLG
Trigger: GCCAAGGCCGGGAAGAGAGCAGGGAGCCCGCGCCCG...GGCCCTCTTCGAATTCACTGGCACCTCATGCAAGTGTAGGAAGGCACGCTGGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343218.10
CDS-3UTR CCA 90 bp AACGGGCTGCAGGGTATGAAGCGGCCAGCCCCCTGGGTCACGTGCAGGTTGCCAGTCAGGGCTCAGGGGTaGGGATGTCACAAATGCAGC +
Preference number: 4 (lower is better)
Translates to: NGLQGMKRPAPWVTCRLPVRAQG*GCHKCS
Trigger: GCTGCATTTGTGACATCCCCACCCCTGAGCCCTGAC...TGGCAACCTGCACGTGACCCAGGGGGCTGGCCGCTTCATACCCTGCAGCCCGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523458.1
CDS-3UTR GCA 90 bp ATTTCCCAAACACCCTTTCCACTACCCAAGCCCGTGGCCCTCAGAGAGAACCGGGGACCTGGTCCGTGGTaGCCGGCCTGGCCAGGTACA +
Preference number: 4 (lower is better)
Translates to: ISQTPFPLPKPVALRENRGPGPW*PAWPGT
Trigger: TGTACCTGGCCAGGCCGGGCACCACGGACCAGGTCC...CCGGTTCTCTCTGAGGGCCACGGGCTTGGGTAGTGGAAAGGGTGTTTGGGAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343218.10
CDS-3UTR CCA 90 bp GAGGTGACCTCGCCGTGTTTAGAAGGAAGCGTCTTTAAGCTGTGGGTGCCCTCACTCTCTTCCCGGCCTTaGCCCCTGCGCGGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: EVTSPCLEGSVFKLWVPSLSSRP*PLRGVS
Trigger: GGACACCCCGCGCAGGGGCCAAGGCCGGGAAGAGAG...TGAGGGCACCCACAGCTTAAAGACGCTTCCTTCTAAACACGGCGAGGTCACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343218.10
CDS-3UTR GCA 90 bp CTTGCCCTGGCAGATGACAACCAGAGGAGCCCCGCGCAGCTCCATCCCTTCAAACCCCTTGGGACGGCATaGAGGTCTGCCATCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LALADDNQRSPAQLHPFKPLGTA*RSAIFL
Trigger: GAGGAAGATGGCAGACCTGCATGCCGTCCCAAGGGG...TTTGAAGGGATGGAGCTGCGCGGGGCTCCTCTGGTTGTCATCTGCCAGGGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523458.1
CDS-3UTR CCA 90 bp CTTGCCCTGGCAGATGACAACCAGAGGAGCCCCGCGCAGCTCCATCCCTTCAAAGTAGTCCGGAGTAGTTaGGTCAGGGCTCAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LALADDNQRSPAQLHPFKVVRSS*VRAQGW
Trigger: CCACCCCTGAGCCCTGACCCAACTACTCCGGACTAC...TTTGAAGGGATGGAGCTGCGCGGGGCTCCTCTGGTTGTCATCTGCCAGGGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523458.1
CDS-3UTR GCA 90 bp CAGAGAGGTTGTGCAGAGATGAGTCAGACTCAGGGGCTGAGTAACAGCAGAGCACAGAGCCTGCGGGGGTaGCACCTTTGGGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: QRGCAEMSQTQGLSNSRAQSLRG*HLWGWW
Trigger: CCACCACCCCCAAAGGTGGCACCCCCGCAGGCTCTG...TGCTCTGCTGTTACTCAGCCCCTGAGTCTGACTCATCTCTGCACAACCTCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp GTAGGGGACGTGACAAAGAACAGAACCCAAAGACTGCCTGCCTTCTCGGCAGACCTGGGGGCGCCACGATaGGCTTGCTGGCTGAGCGAA +
Preference number: 4 (lower is better)
Translates to: VGDVTKNRTQRLPAFSADLGAPR*ACWLSE
Trigger: TTCGCTCAGCCAGCAAGCGCATCGTGGCGCCCCCAG...GTCTGCCGAGAAGGCAGGCAGTCTTTGGGTTCTGTTCTTTGTCACGTCCCCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp GAGACGATCTTCACAGCATCTGGATCCCAGATGACGAGGTCGCTGTCAGAACCCAAGCGGCCAGCCCCCTaGGTCACGTGCAGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: ETIFTASGSQMTRSLSEPKRPAP*VTCRLP
Trigger: TGGCAACCTGCACGTGACCCAGGGGGCTGGCCGCTT...GGGTTCTGACAGCGACCTCGTCATCTGGGATCCAGATGCTGTGAAGATCGTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523458.1
CDS-3UTR CCA 90 bp CCAGGGCAGCCCATGAGTGTATCTGGGACTCAAGCTGGAGTTTTCCAGGGGAGACGCCCCGAGATCAGGTaGAGTGAATGGTGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: PGQPMSVSGTQAGVFQGRRPEIR*SEWCAG
Trigger: GCCAGCGCACCATTCACTCCACCTGATCTCGGGGCG...TCTCCCCTGGAAAACTCCAGCTTGAGTCCCAGATACACTCATGGGCTGCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000398514.7
CDS-3UTR TCA 90 bp GCCCATCGTACATGCCCCTTGGGACGGCATGCAGGTCTGCCATCTTCCTCCGTGTGCGGGGATACAGGTTaGAGATCTTGGCAGCGTTTG +
Preference number: 4 (lower is better)
Translates to: AHRTCPLGRHAGLPSSSVCGDTG*RSWQRL
Trigger: CAAACGCTGCCAAGATCTTCAACCTGTATCCCCGCA...CACGGAGGAAGATGGCAGACCTGCATGCCGTCCCAAGGGGCATGTACGATGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523458.1
CDS-3UTR TCA 90 bp CTTGTAGACATAGTCGGAGAACGGGCTGCAGGGTATGAAGCGGCCAGCCCCCTGCATCTGGATCCCAGATaGCGAGGTCGCTGTCAGAAC +
Preference number: 4 (lower is better)
Translates to: LVDIVGERAAGYEAASPLHLDPR*RGRCQN
Trigger: GTTCTGACAGCGACCTCGTCATCTGGGATCCAGATG...CAGGGGGCTGGCCGCTTCATACCCTGCAGCCCGTTCTCCGACTATGTCTACAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523458.1
CDS-3UTR TCA 90 bp GTAGGGGACGTGACAAAGAACAGAACCCAAAGACTGCCTGCCTTCTCGGCAGACGATGCGCTTGCTGGCTaGGCGAACCCCCTCATCCAC +
Preference number: 4 (lower is better)
Translates to: VGDVTKNRTQRLPAFSADDALAG*ANPLIH
Trigger: GTGGATGAGGGGGTTCGCTCAGCCAGCAAGCGCATC...GTCTGCCGAGAAGGCAGGCAGTCTTTGGGTTCTGTTCTTTGTCACGTCCCCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp GAGGTGACCTCGCCGTGTTTAGAAGGAAGCGTCTTTAAGCTGTGGGTGCCCTCAGATGCGCTTGCTGGCTaGGCGAACCCCCTCATCCAC +
Preference number: 4 (lower is better)
Translates to: EVTSPCLEGSVFKLWVPSDALAG*ANPLIH
Trigger: GTGGATGAGGGGGTTCGCTCAGCCAGCAAGCGCATC...TGAGGGCACCCACAGCTTAAAGACGCTTCCTTCTAAACACGGCGAGGTCACCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp GTAGGGGACGTGACAAAGAACAGAACCCAAAGACTGCCTGCCTTCTCGGCAGACGCACTCCCAGATAGCTaGAGATCCCCGCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: VGDVTKNRTQRLPAFSADALPDS*RSPLAS
Trigger: GCTGGCCAGCGGGGATCTGCAGCTATCTGGGAGTGC...GTCTGCCGAGAAGGCAGGCAGTCTTTGGGTTCTGTTCTTTGTCACGTCCCCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp AATTTCCCAAACACCCTTTCCACTACCCAAGCCCGTGGCCCTCAGAGAGAACCGCTACCCCAGCCCCTCTaGACCCTCCACCTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: NFPNTLSTTQARGPQREPLPQPL*TLHLAP
Trigger: TGGAGCAAGGTGGAGGGTGCAGAGGGGCTGGGGTAG...CGGTTCTCTCTGAGGGCCACGGGCTTGGGTAGTGGAAAGGGTGTTTGGGAAATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp ATCCAGCGTGCCTTCCTACACTTGCATGAGGTGCCAGTGAATTCGAAGAGGGCCTCCGGCCCGAGGCCATaGTTCAAGCACGAAAGCGGC +
Preference number: 4 (lower is better)
Translates to: IQRAFLHLHEVPVNSKRASGPRP*FKHESG
Trigger: GCCGCTTTCGTGCTTGAACCATGGCCTCGGGCCGGA...GGCCCTCTTCGAATTCACTGGCACCTCATGCAAGTGTAGGAAGGCACGCTGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343218.10
CDS-3UTR CCA 90 bp ATCCAGCGTGCCTTCCTACACTTGCATGAGGTGCCAGTGAATTCGAAGAGGGCCCGGGGGTGCCACCTTTaGGGGTGGTGGTCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: IQRAFLHLHEVPVNSKRARGCHL*GWWSGQ
Trigger: TTGACCTGACCACCACCCCCAAAGGTGGCACCCCCG...GGCCCTCTTCGAATTCACTGGCACCTCATGCAAGTGTAGGAAGGCACGCTGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp GAGGTGACCTCGCCGTGTTTAGAAGGAAGCGTCTTTAAGCTGTGGGTGCCCTCACACTACCCAAGCCCGTaGCCCTCAGAGAGAACCGGG +
Preference number: 4 (lower is better)
Translates to: EVTSPCLEGSVFKLWVPSHYPSP*PSERTG
Trigger: CCCGGTTCTCTCTGAGGGCCACGGGCTTGGGTAGTG...TGAGGGCACCCACAGCTTAAAGACGCTTCCTTCTAAACACGGCGAGGTCACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp GAGGTGACCTCGCCGTGTTTAGAAGGAAGCGTCTTTAAGCTGTGGGTGCCCTCAGCCCAGGGCAGCCCATaGGTGTATCTGGGACTCAAG +
Preference number: 4 (lower is better)
Translates to: EVTSPCLEGSVFKLWVPSAQGSP*VYLGLK
Trigger: CTTGAGTCCCAGATACACTCATGGGCTGCCCTGGGC...TGAGGGCACCCACAGCTTAAAGACGCTTCCTTCTAAACACGGCGAGGTCACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp GAATCAAAGGTTCTGGTGGAATGGTTCACTTCGGAAGTCCCAAGGGCAGTGCGGCGCCAGAGGCGGCAGTaGTGCTCCGATTCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: ESKVLVEWFTSEVPRAVRRQRRQ*CSDSCL
Trigger: CAAGCAGGAATCGGAGCAGCACTGCCGCCTCTGGCG...CCGCACTGCCCTTGGGACTTCCGAAGTGAACCATTCCACCAGAACCTTTGATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343218.10
CDS-3UTR GCA 90 bp CAGAGAGGTTGTGCAGAGATGAGTCAGACTCAGGGGCTGAGTAACAGCAGAGCAGCCCCCTGGGTCACGTaGAGGTTGCCATCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: QRGCAEMSQTQGLSNSRAAPWVT*RLPSSS
Trigger: GCTGGAAGATGGCAACCTGCACGTGACCCAGGGGGC...TGCTCTGCTGTTACTCAGCCCCTGAGTCTGACTCATCTCTGCACAACCTCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp CCCATGAGGAAGACTGCATCATGTCACTTCCACTCACTTGGGGAGATTCTAGGACAGAGCCTGCGGGGGTaGCACCTTTGGGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: PMRKTASCHFHSLGEILGQSLRG*HLWGWW
Trigger: CCACCACCCCCAAAGGTGGCACCCCCGCAGGCTCTG...TCCTAGAATCTCCCCAAGTGAGTGGAAGTGACATGATGCAGTCTTCCTCATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp CAGAGAGGTTGTGCAGAGATGAGTCAGACTCAGGGGCTGAGTAACAGCAGAGCACTACCCCAGCCCCTCTaGACCCTCCACCTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: QRGCAEMSQTQGLSNSRALPQPL*TLHLAP
Trigger: TGGAGCAAGGTGGAGGGTGCAGAGGGGCTGGGGTAG...TGCTCTGCTGTTACTCAGCCCCTGAGTCTGACTCATCTCTGCACAACCTCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp GAAGACTGCATCATGTCACTTCCACTCACTTGGGGAGATTCTAGGACTGAGACATTCTGCCGCGGGACCTaGTCCGTGGTGCCCGGCCTG +
Preference number: 4 (lower is better)
Translates to: EDCIMSLPLTWGDSRTETFCRGT*SVVPGL
Trigger: CAGGCCGGGCACCACGGACCAGGTCCCGCGGCAGAA...TGTCTCAGTCCTAGAATCTCCCCAAGTGAGTGGAAGTGACATGATGCAGTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343218.10
CDS-3UTR CCA 90 bp AATTTCCCAAACACCCTTTCCACTACCCAAGCCCGTGGCCCTCAGAGAGAACCGGTAGTCCGGAGTAGTTaGGTCAGGGCTCAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: NFPNTLSTTQARGPQREPVVRSS*VRAQGW
Trigger: CCACCCCTGAGCCCTGACCCAACTACTCCGGACTAC...CGGTTCTCTCTGAGGGCCACGGGCTTGGGTAGTGGAAAGGGTGTTTGGGAAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp CAGAGAGGTTGTGCAGAGATGAGTCAGACTCAGGGGCTGAGTAACAGCAGAGCACGGGGGTGCCACCTTTaGGGGTGGTGGTCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: QRGCAEMSQTQGLSNSRARGCHL*GWWSGQ
Trigger: TTGACCTGACCACCACCCCCAAAGGTGGCACCCCCG...TGCTCTGCTGTTACTCAGCCCCTGAGTCTGACTCATCTCTGCACAACCTCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp AGAGGCTTCCTGAGCTCATGTTGTTCCTCCCAAGGGCATTTGGGGGTTGTTCCCCCACGATGCGCTTGCTaGCTGAGCGAACCCCCTCAT +
Preference number: 4 (lower is better)
Translates to: RGFLSSCCSSQGHLGVVPPRCAC*LSEPPH
Trigger: ATGAGGGGGTTCGCTCAGCCAGCAAGCGCATCGTGG...GGGAACAACCCCCAAATGCCCTTGGGAGGAACAACATGAGCTCAGGAAGCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp TGTGCCAGGATCGAGAGAATCAAACACAAACTGCCTGTAAGAGAGGCCCTTCATCCCGCTGCCCCACGCTaGGGGCATCGAAATCCAGCG +
Preference number: 4 (lower is better)
Translates to: CARIERIKHKLPVREALHPAAPR*GHRNPA
Trigger: CGCTGGATTTCGATGCCCTCAGCGTGGGGCAGCGGG...ATGAAGGGCCTCTCTTACAGGCAGTTTGTGTTTGATTCTCTCGATCCTGGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343218.10
CDS-3UTR TCA 90 bp GTAGGGGACGTGACAAAGAACAGAACCCAAAGACTGCCTGCCTTCTCGGCAGACTGCCGAGGCTGGCAGTaGTGGGCTCACCAAAGACTA +
Preference number: 4 (lower is better)
Translates to: VGDVTKNRTQRLPAFSADCRGWQ*WAHQRL
Trigger: TAGTCTTTGGTGAGCCCATCACTGCCAGCCTCGGCA...GTCTGCCGAGAAGGCAGGCAGTCTTTGGGTTCTGTTCTTTGTCACGTCCCCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp AATTTCCCAAACACCCTTTCCACTACCCAAGCCCGTGGCCCTCAGAGAGAACCGTCTGCAACACCTCTTTaGCGGTGGCGCTCCGGATCT +
Preference number: 4 (lower is better)
Translates to: NFPNTLSTTQARGPQREPSATPL*RWRSGS
Trigger: AGATCCGGAGCGCCACCGGCAAAGAGGTGTTGCAGA...CGGTTCTCTCTGAGGGCCACGGGCTTGGGTAGTGGAAAGGGTGTTTGGGAAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343218.10
CDS-3UTR GCA 90 bp ATTTCCCAAACACCCTTTCCACTACCCAAGCCCGTGGCCCTCAGAGAGAACCGGCCAGCTCTTCTGGCCTaGTCAGTACATGGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: ISQTPFPLPKPVALRENRPALLA*SVHGLL
Trigger: CAGAAGGCCATGTACTGAGCAGGCCAGAAGAGCTGG...CCGGTTCTCTCTGAGGGCCACGGGCTTGGGTAGTGGAAAGGGTGTTTGGGAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp CCCATGAGGAAGACTGCATCATGTCACTTCCACTCACTTGGGGAGATTCTAGGAGCGCCACGATGCGCTTaGTGGCTGAGCGAACCCCCT +
Preference number: 4 (lower is better)
Translates to: PMRKTASCHFHSLGEILGAPRCA*WLSEPP
Trigger: AGGGGGTTCGCTCAGCCAGCAAGCGCATCGTGGCGC...TCCTAGAATCTCCCCAAGTGAGTGGAAGTGACATGATGCAGTCTTCCTCATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp AGAGGCTTCCTGAGCTCATGTTGTTCCTCCCAAGGGCATTTGGGGGTTGTTCCCCACCACGTGGGCCTGTaGTATGTTCTCAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RGFLSSCCSSQGHLGVVPHHVGL*YVLSCW
Trigger: CCAGCAGCTGAGAACATAGCACAGGCCCACGTGGTG...GGGAACAACCCCCAAATGCCCTTGGGAGGAACAACATGAGCTCAGGAAGCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp ATTTCCCAAACACCCTTTCCACTACCCAAGCCCGTGGCCCTCAGAGAGAACCGGGGAACTTACAATGAATaGTGGCTGCCCAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: ISQTPFPLPKPVALRENRGTYNE*WLPRAA
Trigger: GGCTGCCCTGGGCAGCCAGCATTCATTGTAAGTTCC...CCGGTTCTCTCTGAGGGCCACGGGCTTGGGTAGTGGAAAGGGTGTTTGGGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp TGTGCCAGGATCGAGAGAATCAAACACAAACTGCCTGTAAGAGAGGCCCTTCATCCTCCCTCCTTCTTCTaGTCCGGCTCGCCCGCGCCT +
Preference number: 4 (lower is better)
Translates to: CARIERIKHKLPVREALHPPSFF*SGSPAP
Trigger: AGGCGCGGGCGAGCCGGAGCAGAAGAAGGAGGGAGG...ATGAAGGGCCTCTCTTACAGGCAGTTTGTGTTTGATTCTCTCGATCCTGGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398514.7
CDS-3UTR CCA 90 bp ATCCAGCGTGCCTTCCTACACTTGCATGAGGTGCCAGTGAATTCGAAGAGGGCCCATGAACTTGAGCAATaGCCCCCAGCTCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: IQRAFLHLHEVPVNSKRAHELEQ*PPALPG
Trigger: GCCTGGGAGAGCTGGGGGCCATTGCTCAAGTTCATG...GGCCCTCTTCGAATTCACTGGCACCTCATGCAAGTGTAGGAAGGCACGCTGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp GTAGGGGACGTGACAAAGAACAGAACCCAAAGACTGCCTGCCTTCTCGGCAGACATCGTACATGCCCCTTaGGACGGCATGCAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: VGDVTKNRTQRLPAFSADIVHAP*DGMQVC
Trigger: GCAGACCTGCATGCCGTCCCAAGGGGCATGTACGAT...GTCTGCCGAGAAGGCAGGCAGTCTTTGGGTTCTGTTCTTTGTCACGTCCCCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp GAGGTGACCTCGCCGTGTTTAGAAGGAAGCGTCTTTAAGCTGTGGGTGCCCTCACACCTTTGGGGGTGGTaGTCAGGTCAAACACAGGCC +
Preference number: 4 (lower is better)
Translates to: EVTSPCLEGSVFKLWVPSHLWGW*SGQTQA
Trigger: GGCCTGTGTTTGACCTGACCACCACCCCCAAAGGTG...TGAGGGCACCCACAGCTTAAAGACGCTTCCTTCTAAACACGGCGAGGTCACCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp AGAGGCTTCCTGAGCTCATGTTGTTCCTCCCAAGGGCATTTGGGGGTTGTTCCCAGCGTCTTTAAGCTGTaGGTGCCCTCACCACGTGGG +
Preference number: 4 (lower is better)
Translates to: RGFLSSCCSSQGHLGVVPSVFKL*VPSPRG
Trigger: CCCACGTGGTGAGGGCACCCACAGCTTAAAGACGCT...GGGAACAACCCCCAAATGCCCTTGGGAGGAACAACATGAGCTCAGGAAGCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp GAATCAAAGGTTCTGGTGGAATGGTTCACTTCGGAAGTCCCAAGGGCAGTGCGGTGCCTTGGTAGGACATaGTGGCGGTGGTGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: ESKVLVEWFTSEVPRAVRCLGRT*WRWWLQ
Trigger: CTGCAGCCACCACCGCCACCATGTCCTACCAAGGCA...CCGCACTGCCCTTGGGACTTCCGAAGTGAACCATTCCACCAGAACCTTTGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398514.7
CDS-3UTR TCA 90 bp CCAGGGCAGCCCATGAGTGTATCTGGGACTCAAGCTGGAGTTTTCCAGGGGAGATGCGGGGATACAGGTTaGAGATCTTGGCAGCGTTTG +
Preference number: 4 (lower is better)
Translates to: PGQPMSVSGTQAGVFQGRCGDTG*RSWQRL
Trigger: CAAACGCTGCCAAGATCTTCAACCTGTATCCCCGCA...TCTCCCCTGGAAAACTCCAGCTTGAGTCCCAGATACACTCATGGGCTGCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp AATTTCCCAAACACCCTTTCCACTACCCAAGCCCGTGGCCCTCAGAGAGAACCGCATCTGGATCCCAGATaGCGAGGTCGCTGTCAGAAC +
Preference number: 4 (lower is better)
Translates to: NFPNTLSTTQARGPQREPHLDPR*RGRCQN
Trigger: GTTCTGACAGCGACCTCGTCATCTGGGATCCAGATG...CGGTTCTCTCTGAGGGCCACGGGCTTGGGTAGTGGAAAGGGTGTTTGGGAAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp GCGGCTATCTTCCATGGAAATAACGTACGTCATCAACACAATATACAACACCCCACGGGCTGCAGGGTATaGAGCGGCCAGCCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: AAIFHGNNVRHQHNIQHPTGCRV*SGQPPG
Trigger: CCCAGGGGGCTGGCCGCTTCATACCCTGCAGCCCGT...GGGGTGTTGTATATTGTGTTGATGACGTACGTTATTTCCATGGAAGATAGCCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp ATCCAGCGTGCCTTCCTACACTTGCATGAGGTGCCAGTGAATTCGAAGAGGGCCGCAAAGACAGAAGAGTaGGAGGTGACCTCGCCGTGT +
Preference number: 4 (lower is better)
Translates to: IQRAFLHLHEVPVNSKRAAKTEE*EVTSPC
Trigger: ACACGGCGAGGTCACCTCTCACTCTTCTGTCTTTGC...GGCCCTCTTCGAATTCACTGGCACCTCATGCAAGTGTAGGAAGGCACGCTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp CAGAGAGGTTGTGCAGAGATGAGTCAGACTCAGGGGCTGAGTAACAGCAGAGCACAAGGGCAGTGCGGATaGCCGATTTGGCCATGGAAG +
Preference number: 4 (lower is better)
Translates to: QRGCAEMSQTQGLSNSRAQGQCG*PIWPWK
Trigger: CTTCCATGGCCAAATCGGTCATCCGCACTGCCCTTG...TGCTCTGCTGTTACTCAGCCCCTGAGTCTGACTCATCTCTGCACAACCTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp AGAGGCTTCCTGAGCTCATGTTGTTCCTCCCAAGGGCATTTGGGGGTTGTTCCCACAGAACCCAAAGACTaGCTGCCTTCTCGGCAGACC +
Preference number: 4 (lower is better)
Translates to: RGFLSSCCSSQGHLGVVPTEPKD*LPSRQT
Trigger: GGTCTGCCGAGAAGGCAGGCAGTCTTTGGGTTCTGT...GGGAACAACCCCCAAATGCCCTTGGGAGGAACAACATGAGCTCAGGAAGCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp CCAGGGCAGCCCATGAGTGTATCTGGGACTCAAGCTGGAGTTTTCCAGGGGAGAAGAACCGGGATGGATTaGCATCTGGGTTCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: PGQPMSVSGTQAGVFQGRRTGMD*HLGSEA
Trigger: TGCCTCTGAACCCAGATGGCAATCCATCCCGGTTCT...TCTCCCCTGGAAAACTCCAGCTTGAGTCCCAGATACACTCATGGGCTGCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp ATAACGTACGTCATCAACACAATATACAACACCCCTTCCACTCACCTGACCCACCCTCGGTCGCTGCCCTaGCCGCTCCGAGGAGTCTTC +
Preference number: 4 (lower is better)
Translates to: ITYVINTIYNTPSTHLTHPRSLP*PLRGVF
Trigger: GAAGACTCCTCGGAGCGGCCAGGGCAGCGACCGAGG...GTGGGTCAGGTGAGTGGAAGGGGTGTTGTATATTGTGTTGATGACGTACGTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343218.10
CDS-3UTR CCA 90 bp AATTTCCCAAACACCCTTTCCACTACCCAAGCCCGTGGCCCTCAGAGAGAACCGGGTCACTCTTGTCCTTaGGGCCGAGGTTCTGCAACA +
Preference number: 4 (lower is better)
Translates to: NFPNTLSTTQARGPQREPGHSCP*GRGSAT
Trigger: TGTTGCAGAACCTCGGCCCCAAGGACAAGAGTGACC...CGGTTCTCTCTGAGGGCCACGGGCTTGGGTAGTGGAAAGGGTGTTTGGGAAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343218.10
CDS-3UTR CCA 90 bp GAGGTGACCTCGCCGTGTTTAGAAGGAAGCGTCTTTAAGCTGTGGGTGCCCTCACGTCCATTTTCCCTGTaGCCACAGCCTTGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: EVTSPCLEGSVFKLWVPSRPFSL*PQPCPR
Trigger: TCTGGGACAAGGCTGTGGCCACAGGGAAAATGGACG...TGAGGGCACCCACAGCTTAAAGACGCTTCCTTCTAAACACGGCGAGGTCACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp AATTTCCCAAACACCCTTTCCACTACCCAAGCCCGTGGCCCTCAGAGAGAACCGTACTCTGCCGCAGACTaGTGGTTCTTGGCAGAGACG +
Preference number: 4 (lower is better)
Translates to: NFPNTLSTTQARGPQREPYSAAD*WFLAET
Trigger: CGTCTCTGCCAAGAACCACCAGTCTGCGGCAGAGTA...CGGTTCTCTCTGAGGGCCACGGGCTTGGGTAGTGGAAAGGGTGTTTGGGAAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp GAAGACTGCATCATGTCACTTCCACTCACTTGGGGAGATTCTAGGACTGAGACAAAGCGGCCAGCCCCCTaGGTCACGTGCAGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: EDCIMSLPLTWGDSRTETKRPAP*VTCRLP
Trigger: TGGCAACCTGCACGTGACCCAGGGGGCTGGCCGCTT...TGTCTCAGTCCTAGAATCTCCCCAAGTGAGTGGAAGTGACATGATGCAGTCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp CGCAGACTGGTGGTTCTTGGCAGAGACGATCTTCACAGCATCTGGATCCCAGATATCGTACATGCCCCTTaGGACGGCATGCAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: RRLVVLGRDDLHSIWIPDIVHAP*DGMQVC
Trigger: GCAGACCTGCATGCCGTCCCAAGGGGCATGTACGAT...ATCTGGGATCCAGATGCTGTGAAGATCGTCTCTGCCAAGAACCACCAGTCTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523458.1
CDS-3UTR CCA 90 bp AATTTCCCAAACACCCTTTCCACTACCCAAGCCCGTGGCCCTCAGAGAGAACCGCCTCCCAAGGGCATTTaGGGGTTGTTCCCAGAGCAA +
Preference number: 4 (lower is better)
Translates to: NFPNTLSTTQARGPQREPPPKGI*GLFPEQ
Trigger: TTGCTCTGGGAACAACCCCCAAATGCCCTTGGGAGG...CGGTTCTCTCTGAGGGCCACGGGCTTGGGTAGTGGAAAGGGTGTTTGGGAAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp CCAGGGCAGCCCATGAGTGTATCTGGGACTCAAGCTGGAGTTTTCCAGGGGAGACAGAGAGAACCGGGATaGATTGCCATCTGGGTTCAG +
Preference number: 4 (lower is better)
Translates to: PGQPMSVSGTQAGVFQGRQREPG*IAIWVQ
Trigger: CTGAACCCAGATGGCAATCCATCCCGGTTCTCTCTG...TCTCCCCTGGAAAACTCCAGCTTGAGTCCCAGATACACTCATGGGCTGCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR CAA 72 bp GGGGCAGGCCAAGGGATGAGATGGCAAAGGACAGCTTaGGAATCAGATAGACGATCCAGCGTGCCTTCCTAC +
Preference number: 4 (lower is better)
Translates to: GAGQGMRWQRTA*ESDRRSSVPSY
Trigger: GTAGGAAGGCACGCTGGATCGTCTATCTGATTCCAAAGCTGTCCTTTGCCATCTCATCCCTTGGCCTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp AGAGGCTTCCTGAGCTCATGTTGTTCCTCCCAAGGGCATTTGGGGGTTGTTCCCTGCGGGGATACAGGTTaGAGATCTTGGCAGCGTTTG +
Preference number: 4 (lower is better)
Translates to: RGFLSSCCSSQGHLGVVPCGDTG*RSWQRL
Trigger: CAAACGCTGCCAAGATCTTCAACCTGTATCCCCGCA...GGGAACAACCCCCAAATGCCCTTGGGAGGAACAACATGAGCTCAGGAAGCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp ATCCAGCGTGCCTTCCTACACTTGCATGAGGTGCCAGTGAATTCGAAGAGGGCCCTTTCAGGTGCCCCATaGGGAAGACTGCATCATGTC +
Preference number: 4 (lower is better)
Translates to: IQRAFLHLHEVPVNSKRALSGAP*GRLHHV
Trigger: GACATGATGCAGTCTTCCTCATGGGGCACCTGAAAG...GGCCCTCTTCGAATTCACTGGCACCTCATGCAAGTGTAGGAAGGCACGCTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp GAGGTGACCTCGCCGTGTTTAGAAGGAAGCGTCTTTAAGCTGTGGGTGCCCTCAAGGGCTTCTCAGGGATaGGTGAAAATCCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: EVTSPCLEGSVFKLWVPSRASQG*VKIQAQ
Trigger: CTGAGCCTGGATTTTCACTCATCCCTGAGAAGCCCT...TGAGGGCACCCACAGCTTAAAGACGCTTCCTTCTAAACACGGCGAGGTCACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp CTCCCTCTGCTCAAGACTGACTTTGGCTTTCCCAGTTCCCCACTTGACTTTCATGCCCAGGGCAGCCCATaGGTGTATCTGGGACTCAAG +
Preference number: 4 (lower is better)
Translates to: LPLLKTDFGFPSSPLDFHAQGSP*VYLGLK
Trigger: CTTGAGTCCCAGATACACTCATGGGCTGCCCTGGGC...ATGAAAGTCAAGTGGGGAACTGGGAAAGCCAAAGTCAGTCTTGAGCAGAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp CTCCCTCTGCTCAAGACTGACTTTGGCTTTCCCAGTTCCCCACTTGACTTTCATCAGAGGCGGCAGTGCTaGTCCGATTCCTGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: LPLLKTDFGFPSSPLDFHQRRQC*SDSCLS
Trigger: GGACAAGCAGGAATCGGAGCAGCACTGCCGCCTCTG...ATGAAAGTCAAGTGGGGAACTGGGAAAGCCAAAGTCAGTCTTGAGCAGAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343218.10
CDS-3UTR GCA 90 bp ATTTCCCAAACACCCTTTCCACTACCCAAGCCCGTGGCCCTCAGAGAGAACCGGAGGTTCTGCACTTCCTaGTTGACGCTGTCATTCCAG +
Preference number: 4 (lower is better)
Translates to: ISQTPFPLPKPVALRENRRFCTS*LTLSFQ
Trigger: CTGGAATGACAGCGTCAAGCAGGAAGTGCAGAACCT...CCGGTTCTCTCTGAGGGCCACGGGCTTGGGTAGTGGAAAGGGTGTTTGGGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp ATTTCCCAAACACCCTTTCCACTACCCAAGCCCGTGGCCCTCAGAGAGAACCGGTCCAACATGCGGGTTTaGTCCTGGGCAATGATATCC +
Preference number: 4 (lower is better)
Translates to: ISQTPFPLPKPVALRENRSNMRV*SWAMIS
Trigger: GGATATCATTGCCCAGGAGCAAACCCGCATGTTGGA...CCGGTTCTCTCTGAGGGCCACGGGCTTGGGTAGTGGAAAGGGTGTTTGGGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp TCCCTCTGCTCAAGACTGACTTTGGCTTTCCCAGTTCCCCACTTGACTTTCATAGCCCCCTGGGTCACGTaGAGGTTGCCATCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: SLCSRLTLAFPVPHLTFIAPWVT*RLPSSS
Trigger: GCTGGAAGATGGCAACCTGCACGTGACCCAGGGGGC...TATGAAAGTCAAGTGGGGAACTGGGAAAGCCAAAGTCAGTCTTGAGCAGAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp CCCATGAGGAAGACTGCATCATGTCACTTCCACTCACTTGGGGAGATTCTAGGACAGGCCCATCGTACATaGCCCTTGGGACGGCATGCA +
Preference number: 4 (lower is better)
Translates to: PMRKTASCHFHSLGEILGQAHRT*PLGRHA
Trigger: TGCATGCCGTCCCAAGGGGCATGTACGATGGGCCTG...TCCTAGAATCTCCCCAAGTGAGTGGAAGTGACATGATGCAGTCTTCCTCATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp GCAAACACTGGCACAATCAAGCAGGTGGAAGAAATGGTTGGGTCTTGGCATTTTGCGCCACGATGCGCTTaGTGGCTGAGCGAACCCCCT +
Preference number: 4 (lower is better)
Translates to: ANTGTIKQVEEMVGSWHFAPRCA*WLSEPP
Trigger: AGGGGGTTCGCTCAGCCAGCAAGCGCATCGTGGCGC...AAAATGCCAAGACCCAACCATTTCTTCCACCTGCTTGATTGTGCCAGTGTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp GAATCAAAGGTTCTGGTGGAATGGTTCACTTCGGAAGTCCCAAGGGCAGTGCGGACAGAACCCAAAGACTaGCTGCCTTCTCGGCAGACC +
Preference number: 4 (lower is better)
Translates to: ESKVLVEWFTSEVPRAVRTEPKD*LPSRQT
Trigger: GGTCTGCCGAGAAGGCAGGCAGTCTTTGGGTTCTGT...CCGCACTGCCCTTGGGACTTCCGAAGTGAACCATTCCACCAGAACCTTTGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp GTAGGGGACGTGACAAAGAACAGAACCCAAAGACTGCCTGCCTTCTCGGCAGACCAGCAGAGCAGAGAGTaGAGAAGTGGACGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: VGDVTKNRTQRLPAFSADQQSRE*RSGRSE
Trigger: TTCTGAGCGTCCACTTCTGCACTCTCTGCTCTGCTG...GTCTGCCGAGAAGGCAGGCAGTCTTTGGGTTCTGTTCTTTGTCACGTCCCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp CCCATGAGGAAGACTGCATCATGTCACTTCCACTCACTTGGGGAGATTCTAGGAACACCTCTTTGCCGGTaGCGCTCCGGATCTCTACCC +
Preference number: 4 (lower is better)
Translates to: PMRKTASCHFHSLGEILGTPLCR*RSGSLP
Trigger: GGGTAGAGATCCGGAGCGCCACCGGCAAAGAGGTGT...TCCTAGAATCTCCCCAAGTGAGTGGAAGTGACATGATGCAGTCTTCCTCATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343218.10
CDS-3UTR CCA 90 bp ATCCAGCGTGCCTTCCTACACTTGCATGAGGTGCCAGTGAATTCGAAGAGGGCCGGCTCAGGCACCACATaGTCAATGATCATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: IQRAFLHLHEVPVNSKRAGSGTT*SMIMVV
Trigger: CACCACCATGATCATTGACCATGTGGTGCCTGAGCC...GGCCCTCTTCGAATTCACTGGCACCTCATGCAAGTGTAGGAAGGCACGCTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp GAATCAAAGGTTCTGGTGGAATGGTTCACTTCGGAAGTCCCAAGGGCAGTGCGGAGCTTCCAGCTCTTCTaGCCTGCTCAGTACATGGCC +
Preference number: 4 (lower is better)
Translates to: ESKVLVEWFTSEVPRAVRSFQLF*PAQYMA
Trigger: GGCCATGTACTGAGCAGGCCAGAAGAGCTGGAAGCT...CCGCACTGCCCTTGGGACTTCCGAAGTGAACCATTCCACCAGAACCTTTGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp ACTCTGCCGCAGACTGGTGGTTCTTGGCAGAGACGATCTTCACAGCATCTGGATTACTCTGCCGCAGACTaGTGGTTCTTGGCAGAGACG +
Preference number: 4 (lower is better)
Translates to: TLPQTGGSWQRRSSQHLDYSAAD*WFLAET
Trigger: CGTCTCTGCCAAGAACCACCAGTCTGCGGCAGAGTA...ATCCAGATGCTGTGAAGATCGTCTCTGCCAAGAACCACCAGTCTGCGGCAGAGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523458.1
CDS-3UTR CCA 90 bp ATTTCCCAAACACCCTTTCCACTACCCAAGCCCGTGGCCCTCAGAGAGAACCGGGGAAGGGGAAACAGGTaGTTTGGAATGGAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: ISQTPFPLPKPVALRENRGRGNR*FGMERW
Trigger: CCACCTTTCCATTCCAAACCACCTGTTTCCCCTTCC...CCGGTTCTCTCTGAGGGCCACGGGCTTGGGTAGTGGAAAGGGTGTTTGGGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp ATAACGTACGTCATCAACACAATATACAACACCCCTTCCACTCACCTGACCCACGGGCATCCTCAGGGTTaGGGGGCAGGCCAAGGGATG +
Preference number: 4 (lower is better)
Translates to: ITYVINTIYNTPSTHLTHGHPQG*GAGQGM
Trigger: CATCCCTTGGCCTGCCCCCCAACCCTGAGGATGCCC...GTGGGTCAGGTGAGTGGAAGGGGTGTTGTATATTGTGTTGATGACGTACGTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp AATTTCCCAAACACCCTTTCCACTACCCAAGCCCGTGGCCCTCAGAGAGAACCGACTTACAATGAATGCTaGCTGCCCAGGGCAGCCCAT +
Preference number: 4 (lower is better)
Translates to: NFPNTLSTTQARGPQREPTYNEC*LPRAAH
Trigger: ATGGGCTGCCCTGGGCAGCCAGCATTCATTGTAAGT...CGGTTCTCTCTGAGGGCCACGGGCTTGGGTAGTGGAAAGGGTGTTTGGGAAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp CAAAGATGTTGTACTCTGCCGCAGACTGGTGGTTCTTGGCAGAGACGATCTTCATGCCGAGGCTGGCAGTaGTGGGCTCACCAAAGACTA +
Preference number: 4 (lower is better)
Translates to: QRCCTLPQTGGSWQRRSSCRGWQ*WAHQRL
Trigger: TAGTCTTTGGTGAGCCCATCACTGCCAGCCTCGGCA...TGAAGATCGTCTCTGCCAAGAACCACCAGTCTGCGGCAGAGTACAACATCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523458.1
CDS-3UTR TCA 90 bp GTAGGGGACGTGACAAAGAACAGAACCCAAAGACTGCCTGCCTTCTCGGCAGACCCTCAGGAATGGCTGTaGAGTTGTCCTTCCCAATTG +
Preference number: 4 (lower is better)
Translates to: VGDVTKNRTQRLPAFSADPQEWL*SCPSQL
Trigger: CAATTGGGAAGGACAACTTCACAGCCATTCCTGAGG...GTCTGCCGAGAAGGCAGGCAGTCTTTGGGTTCTGTTCTTTGTCACGTCCCCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp CCAGGGCAGCCCATGAGTGTATCTGGGACTCAAGCTGGAGTTTTCCAGGGGAGAACTAAGAAAGAGGCCTaGGCAAACACTGGCACAATC +
Preference number: 4 (lower is better)
Translates to: PGQPMSVSGTQAGVFQGRTKKEA*ANTGTI
Trigger: GATTGTGCCAGTGTTTGCTCAGGCCTCTTTCTTAGT...TCTCCCCTGGAAAACTCCAGCTTGAGTCCCAGATACACTCATGGGCTGCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp CTCCCTCTGCTCAAGACTGACTTTGGCTTTCCCAGTTCCCCACTTGACTTTCATCAAGGGCAGTGCGGATaGCCGATTTGGCCATGGAAG +
Preference number: 4 (lower is better)
Translates to: LPLLKTDFGFPSSPLDFHQGQCG*PIWPWK
Trigger: CTTCCATGGCCAAATCGGTCATCCGCACTGCCCTTG...ATGAAAGTCAAGTGGGGAACTGGGAAAGCCAAAGTCAGTCTTGAGCAGAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp CCAGGGCAGCCCATGAGTGTATCTGGGACTCAAGCTGGAGTTTTCCAGGGGAGACAGTATAGACAGTCGTaGAGAACAAGGCTGAGGGAT +
Preference number: 4 (lower is better)
Translates to: PGQPMSVSGTQAGVFQGRQYRQS*RTRLRD
Trigger: ATCCCTCAGCCTTGTTCTTCACGACTGTCTATACTG...TCTCCCCTGGAAAACTCCAGCTTGAGTCCCAGATACACTCATGGGCTGCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp GAGGTGACCTCGCCGTGTTTAGAAGGAAGCGTCTTTAAGCTGTGGGTGCCCTCATCCTTGATGAGGTTCTaGACTTCCTGCTTGACGCTG +
Preference number: 4 (lower is better)
Translates to: EVTSPCLEGSVFKLWVPSSLMRF*TSCLTL
Trigger: CAGCGTCAAGCAGGAAGTGCAGAACCTCATCAAGGA...TGAGGGCACCCACAGCTTAAAGACGCTTCCTTCTAAACACGGCGAGGTCACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp CCAGGGCAGCCCATGAGTGTATCTGGGACTCAAGCTGGAGTTTTCCAGGGGAGAGTTGTCCTTCCCAATTaGTTTCTGGGCAGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: PGQPMSVSGTQAGVFQGRVVLPN*FLGSAE
Trigger: TTCAGCACTGCCCAGAAAGCAATTGGGAAGGACAAC...TCTCCCCTGGAAAACTCCAGCTTGAGTCCCAGATACACTCATGGGCTGCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp GTAGGGGACGTGACAAAGAACAGAACCCAAAGACTGCCTGCCTTCTCGGCAGACTCTTGGCAGCGTTTGTaGTTGTCACAGCCACGAACT +
Preference number: 4 (lower is better)
Translates to: VGDVTKNRTQRLPAFSADSWQRL*LSQPRT
Trigger: AGTTCGTGGCTGTGACAAGCACAAACGCTGCCAAGA...GTCTGCCGAGAAGGCAGGCAGTCTTTGGGTTCTGTTCTTTGTCACGTCCCCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp TCCCTCTGCTCAAGACTGACTTTGGCTTTCCCAGTTCCCCACTTGACTTTCATACCCCTTGGGACGGCATaGAGGTCTGCCATCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SLCSRLTLAFPVPHLTFIPLGTA*RSAIFL
Trigger: GAGGAAGATGGCAGACCTGCATGCCGTCCCAAGGGG...TATGAAAGTCAAGTGGGGAACTGGGAAAGCCAAAGTCAGTCTTGAGCAGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp GGAAATAACGTACGTCATCAACACAATATACAACACCCCTTCCACTCACCTGACCTGGGGGCGCCACGATaGGCTTGCTGGCTGAGCGAA +
Preference number: 4 (lower is better)
Translates to: GNNVRHQHNIQHPFHSPDLGAPR*ACWLSE
Trigger: TTCGCTCAGCCAGCAAGCGCATCGTGGCGCCCCCAG...GTCAGGTGAGTGGAAGGGGTGTTGTATATTGTGTTGATGACGTACGTTATTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp GTGGACGCTCAGAAGCGAGTTTATGTGTGTCTTTTCCTCTATCTGCTGGCTGTGTCTTTAAGCTGTGGGTaGCCTCACCACGTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: VDAQKRVYVCLFLYLLAVSLSCG*PHHVGL
Trigger: CAGGCCCACGTGGTGAGGGCACCCACAGCTTAAAGA...CACAGCCAGCAGATAGAGGAAAAGACACACATAAACTCGCTTCTGAGCGTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp GTAGGGGACGTGACAAAGAACAGAACCCAAAGACTGCCTGCCTTCTCGGCAGACCAGGTCCACAAAATGTaGTCCCTCTGCTCAAGACTG +
Preference number: 4 (lower is better)
Translates to: VGDVTKNRTQRLPAFSADQVHKM*SLCSRL
Trigger: CAGTCTTGAGCAGAGGGAGCACATTTTGTGGACCTG...GTCTGCCGAGAAGGCAGGCAGTCTTTGGGTTCTGTTCTTTGTCACGTCCCCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp AGAGGCTTCCTGAGCTCATGTTGTTCCTCCCAAGGGCATTTGGGGGTTGTTCCCGGCACAGAGAGGTTGTaGAGAGATGAGTCAGACTCA +
Preference number: 4 (lower is better)
Translates to: RGFLSSCCSSQGHLGVVPGTERL*RDESDS
Trigger: TGAGTCTGACTCATCTCTGCACAACCTCTCTGTGCC...GGGAACAACCCCCAAATGCCCTTGGGAGGAACAACATGAGCTCAGGAAGCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp ATCCAGCGTGCCTTCCTACACTTGCATGAGGTGCCAGTGAATTCGAAGAGGGCCGGCACAGAGAGGTTGTaGAGAGATGAGTCAGACTCA +
Preference number: 4 (lower is better)
Translates to: IQRAFLHLHEVPVNSKRAGTERL*RDESDS
Trigger: TGAGTCTGACTCATCTCTGCACAACCTCTCTGTGCC...GGCCCTCTTCGAATTCACTGGCACCTCATGCAAGTGTAGGAAGGCACGCTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp GTAGGGGACGTGACAAAGAACAGAACCCAAAGACTGCCTGCCTTCTCGGCAGACAAGGAAGTTGGGAATTaGCCACCCTACTGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: VGDVTKNRTQRLPAFSADKEVGN*PPYWKG
Trigger: CCCTTTCCAGTAGGGTGGGCAATTCCCAACTTCCTT...GTCTGCCGAGAAGGCAGGCAGTCTTTGGGTTCTGTTCTTTGTCACGTCCCCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp CAGAGAGGTTGTGCAGAGATGAGTCAGACTCAGGGGCTGAGTAACAGCAGAGCAGCGGGATGTTCTTCTTaGCTTGGTAGGACATGGTGG +
Preference number: 4 (lower is better)
Translates to: QRGCAEMSQTQGLSNSRAAGCSS*LGRTWW
Trigger: CCACCATGTCCTACCAAGGCAAGAAGAACATCCCGC...TGCTCTGCTGTTACTCAGCCCCTGAGTCTGACTCATCTCTGCACAACCTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398514.7
CDS-3UTR CCA 90 bp TTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCGCGGGACCTGGTCCGTaGTGCCCGGCCTGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: FFRSQPFGFAFLLKYRCTAGPGP*CPAWPG
Trigger: ACCTGGCCAGGCCGGGCACCACGGACCAGGTCCCGC...GGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343218.10
CDS-3UTR CCA 90 bp GTGGACGCTCAGAAGCGAGTTTATGTGTGTCTTTTCCTCTATCTGCTGGCTGTGCATGAACTTGAGCAATaGCCCCCAGCTCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: VDAQKRVYVCLFLYLLAVHELEQ*PPALPG
Trigger: GCCTGGGAGAGCTGGGGGCCATTGCTCAAGTTCATG...CACAGCCAGCAGATAGAGGAAAAGACACACATAAACTCGCTTCTGAGCGTCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp AGAGGCTTCCTGAGCTCATGTTGTTCCTCCCAAGGGCATTTGGGGGTTGTTCCCATGCGGGTTTGCTCCTaGGCAATGATATCCCCATTC +
Preference number: 4 (lower is better)
Translates to: RGFLSSCCSSQGHLGVVPMRVCS*AMISPF
Trigger: GAATGGGGATATCATTGCCCAGGAGCAAACCCGCAT...GGGAACAACCCCCAAATGCCCTTGGGAGGAACAACATGAGCTCAGGAAGCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp CCCATGAGGAAGACTGCATCATGTCACTTCCACTCACTTGGGGAGATTCTAGGAGTGCTGAAGGTGCAGTaGGCACTCCCAGATAGCTGC +
Preference number: 4 (lower is better)
Translates to: PMRKTASCHFHSLGEILGVLKVQ*ALPDSC
Trigger: GCAGCTATCTGGGAGTGCCCACTGCACCTTCAGCAC...TCCTAGAATCTCCCCAAGTGAGTGGAAGTGACATGATGCAGTCTTCCTCATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp AATTTCCCAAACACCCTTTCCACTACCCAAGCCCGTGGCCCTCAGAGAGAACCGTTCCCAATTGCTTTCTaGGCAGTGCTGAAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: NFPNTLSTTQARGPQREPFPIAF*AVLKVQ
Trigger: CTGCACCTTCAGCACTGCCCAGAAAGCAATTGGGAA...CGGTTCTCTCTGAGGGCCACGGGCTTGGGTAGTGGAAAGGGTGTTTGGGAAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp GTGGACGCTCAGAAGCGAGTTTATGTGTGTCTTTTCCTCTATCTGCTGGCTGTGGCTCCTCCACACCATTaGTGCCCTCAGGAATGGCTG +
Preference number: 4 (lower is better)
Translates to: VDAQKRVYVCLFLYLLAVAPPHH*CPQEWL
Trigger: CAGCCATTCCTGAGGGCACCAATGGTGTGGAGGAGC...CACAGCCAGCAGATAGAGGAAAAGACACACATAAACTCGCTTCTGAGCGTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp GTAGGGGACGTGACAAAGAACAGAACCCAAAGACTGCCTGCCTTCTCGGCAGACGATCTTCACAGCATCTaGATCCCAGATGACGAGGTC +
Preference number: 4 (lower is better)
Translates to: VGDVTKNRTQRLPAFSADDLHSI*IPDDEV
Trigger: GACCTCGTCATCTGGGATCCAGATGCTGTGAAGATC...GTCTGCCGAGAAGGCAGGCAGTCTTTGGGTTCTGTTCTTTGTCACGTCCCCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp GAGGTGACCTCGCCGTGTTTAGAAGGAAGCGTCTTTAAGCTGTGGGTGCCCTCACAGACTGGTGGTTCTTaGCAGAGACGATCTTCACAG +
Preference number: 4 (lower is better)
Translates to: EVTSPCLEGSVFKLWVPSQTGGS*QRRSSQ
Trigger: CTGTGAAGATCGTCTCTGCCAAGAACCACCAGTCTG...TGAGGGCACCCACAGCTTAAAGACGCTTCCTTCTAAACACGGCGAGGTCACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp ATTTCCCAAACACCCTTTCCACTACCCAAGCCCGTGGCCCTCAGAGAGAACCGGGCTAAAATCCTGACTTaGGATGCCAGAAGCATGCCA +
Preference number: 4 (lower is better)
Translates to: ISQTPFPLPKPVALRENRAKILT*DARSMP
Trigger: TGGCATGCTTCTGGCATCCCAAGTCAGGATTTTAGC...CCGGTTCTCTCTGAGGGCCACGGGCTTGGGTAGTGGAAAGGGTGTTTGGGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp GAGGTGACCTCGCCGTGTTTAGAAGGAAGCGTCTTTAAGCTGTGGGTGCCCTCATCTATCTGCTGGCTGTaGCTGGTACTGCAACCTATC +
Preference number: 4 (lower is better)
Translates to: EVTSPCLEGSVFKLWVPSSICWL*LVLQPI
Trigger: GATAGGTTGCAGTACCAGCCACAGCCAGCAGATAGA...TGAGGGCACCCACAGCTTAAAGACGCTTCCTTCTAAACACGGCGAGGTCACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp GCGGCTATCTTCCATGGAAATAACGTACGTCATCAACACAATATACAACACCCCGGGCATCCTCAGGGTTaGGGGGCAGGCCAAGGGATG +
Preference number: 4 (lower is better)
Translates to: AAIFHGNNVRHQHNIQHPGHPQG*GAGQGM
Trigger: CATCCCTTGGCCTGCCCCCCAACCCTGAGGATGCCC...GGGGTGTTGTATATTGTGTTGATGACGTACGTTATTTCCATGGAAGATAGCCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp CAGAGAGGTTGTGCAGAGATGAGTCAGACTCAGGGGCTGAGTAACAGCAGAGCAACTTACAATGAATGCTaGCTGCCCAGGGCAGCCCAT +
Preference number: 4 (lower is better)
Translates to: QRGCAEMSQTQGLSNSRATYNEC*LPRAAH
Trigger: ATGGGCTGCCCTGGGCAGCCAGCATTCATTGTAAGT...TGCTCTGCTGTTACTCAGCCCCTGAGTCTGACTCATCTCTGCACAACCTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp GGAAATAACGTACGTCATCAACACAATATACAACACCCCTTCCACTCACCTGACATCAGGTGGAGTGAATaGTGCGCTGGCCGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: GNNVRHQHNIQHPFHSPDIRWSE*CAGRAA
Trigger: GGCGGCGCGGCCAGCGCACCATTCACTCCACCTGAT...GTCAGGTGAGTGGAAGGGGTGTTGTATATTGTGTTGATGACGTACGTTATTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398514.7
CDS-3UTR CCA 90 bp GCAAACACTGGCACAATCAAGCAGGTGGAAGAAATGGTTGGGTCTTGGCATTTTCTTGGTAGGACATGGTaGCGGTGGTGGCTGCAGCGG +
Preference number: 4 (lower is better)
Translates to: ANTGTIKQVEEMVGSWHFLGRTW*RWWLQR
Trigger: CCGCTGCAGCCACCACCGCCACCATGTCCTACCAAG...AAAATGCCAAGACCCAACCATTTCTTCCACCTGCTTGATTGTGCCAGTGTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398514.7
3UTR CAA 72 bp ACTTCGGAAGTCCCAAGGGCAGTGCGGATGACCGATTaGGCCATGGAAGACTTATCTTCATGGCACAGAGAG +
Preference number: 4 (lower is better)
Translates to: TSEVPRAVRMTD*AMEDLSSWHRE
Trigger: CTCTCTGTGCCATGAAGATAAGTCTTCCATGGCCAAATCGGTCATCCGCACTGCCCTTGGGACTTCCGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp ATTGATTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGCGGGAGGAGGCGCCTaGGCCTTCGCGCCAGAGGCG +
Preference number: 4 (lower is better)
Translates to: IDSLDHNRLDSLSFLNIGAGGGA*AFAPEA
Trigger: CGCCTCTGGCGCGAAGGCTCAGGCGCCTCCTCCCGC...ACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAATCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343218.10
CDS-3UTR TCA 90 bp GTAGGGGACGTGACAAAGAACAGAACCCAAAGACTGCCTGCCTTCTCGGCAGACTATGGCATCTGGAAGTaGGTATGGACATCGATGCCT +
Preference number: 4 (lower is better)
Translates to: VGDVTKNRTQRLPAFSADYGIWK*VWTSMP
Trigger: AGGCATCGATGTCCATACTCACTTCCAGATGCCATA...GTCTGCCGAGAAGGCAGGCAGTCTTTGGGTTCTGTTCTTTGTCACGTCCCCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp TTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCACGGGCTGCAGGGTATaGAGCGGCCAGCCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: FFRSQPFGFAFLLKYRCTTGCRV*SGQPPG
Trigger: CCCAGGGGGCTGGCCGCTTCATACCCTGCAGCCCGT...GGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp GCAAACACTGGCACAATCAAGCAGGTGGAAGAAATGGTTGGGTCTTGGCATTTTGGAGCTGTGGTGATGTaGCAGCTGCCACAGCGGCTA +
Preference number: 4 (lower is better)
Translates to: ANTGTIKQVEEMVGSWHFGAVVM*QLPQRL
Trigger: TAGCCGCTGTGGCAGCTGTCACATCACCACAGCTCC...AAAATGCCAAGACCCAACCATTTCTTCCACCTGCTTGATTGTGCCAGTGTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp ATCCAGCGTGCCTTCCTACACTTGCATGAGGTGCCAGTGAATTCGAAGAGGGCCTCTGAGCTAAAATCCTaGCTTGGGATGCCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: IQRAFLHLHEVPVNSKRASELKS*LGMPEA
Trigger: TGCTTCTGGCATCCCAAGTCAGGATTTTAGCTCAGA...GGCCCTCTTCGAATTCACTGGCACCTCATGCAAGTGTAGGAAGGCACGCTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp CAGAGAGGTTGTGCAGAGATGAGTCAGACTCAGGGGCTGAGTAACAGCAGAGCACTTCTCAGGGATGAGTaGAAATCCAGGCTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: QRGCAEMSQTQGLSNSRALLRDE*KSRLRC
Trigger: ACACCTGAGCCTGGATTTTCACTCATCCCTGAGAAG...TGCTCTGCTGTTACTCAGCCCCTGAGTCTGACTCATCTCTGCACAACCTCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp CCCATGAGGAAGACTGCATCATGTCACTTCCACTCACTTGGGGAGATTCTAGGAAGAGGGAACTTACAATaGATGCTGGCTGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: PMRKTASCHFHSLGEILGRGNLQ*MLAAQG
Trigger: GCCCTGGGCAGCCAGCATTCATTGTAAGTTCCCTCT...TCCTAGAATCTCCCCAAGTGAGTGGAAGTGACATGATGCAGTCTTCCTCATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp CTGCTCTTCTCTTCAAAGCACTTAGTACACAGGGTTACAGGTGCTACCACTTGGTGCTGCTCCGATTCCTaGTTGTCCCTAGCGAGCCAG +
Preference number: 4 (lower is better)
Translates to: LLFSSKHLVHRVTGATTWCCSDS*LSLASQ
Trigger: CTGGCTCGCTAGGGACAAGCAGGAATCGGAGCAGCA...CCAAGTGGTAGCACCTGTAACCCTGTGTACTAAGTGCTTTGAAGAGAAGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343218.10
CDS-3UTR GCA 90 bp GCGGCTATCTTCCATGGAAATAACGTACGTCATCAACACAATATACAACACCCCATGCCGCCGTATTTCTaGCGCGGGACCTGGTCCGTG +
Preference number: 4 (lower is better)
Translates to: AAIFHGNNVRHQHNIQHPMPPYF*RGTWSV
Trigger: CACGGACCAGGTCCCGCGGCAGAAATACGGCGGCAT...GGGGTGTTGTATATTGTGTTGATGACGTACGTTATTTCCATGGAAGATAGCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343218.10
CDS-3UTR GCA 90 bp CTCCCTCTGCTCAAGACTGACTTTGGCTTTCCCAGTTCCCCACTTGACTTTCATGACGGCATGCAGGTCTaGCATCTTCCTCCGTGCTTT +
Preference number: 4 (lower is better)
Translates to: LPLLKTDFGFPSSPLDFHDGMQV*HLPPCF
Trigger: AAAGCACGGAGGAAGATGGCAGACCTGCATGCCGTC...ATGAAAGTCAAGTGGGGAACTGGGAAAGCCAAAGTCAGTCTTGAGCAGAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp CAGGTCTGCCATCTTCCTCCGTGCTTTAATGCGCTTGTAGACATAGTCGGAGAAGACGGCATGCAGGTCTaGCATCTTCCTCCGTGCTTT +
Preference number: 4 (lower is better)
Translates to: QVCHLPPCFNALVDIVGEDGMQV*HLPPCF
Trigger: AAAGCACGGAGGAAGATGGCAGACCTGCATGCCGTC...TTCTCCGACTATGTCTACAAGCGCATTAAAGCACGGAGGAAGATGGCAGACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523458.1
CDS-3UTR GCA 90 bp GAAGACTGCATCATGTCACTTCCACTCACTTGGGGAGATTCTAGGACTGAGACACATTTGCTCTGTCCCTaGCTGGCCTTCCCAACCCAG +
Preference number: 4 (lower is better)
Translates to: EDCIMSLPLTWGDSRTETHLLCP*LAFPTQ
Trigger: CTGGGTTGGGAAGGCCAGGCAGGGACAGAGCAAATG...TGTCTCAGTCCTAGAATCTCCCCAAGTGAGTGGAAGTGACATGATGCAGTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp AGAGGCTTCCTGAGCTCATGTTGTTCCTCCCAAGGGCATTTGGGGGTTGTTCCCAATCCTGACTTGGGATaGCAGAAGCATGCCACTCTT +
Preference number: 4 (lower is better)
Translates to: RGFLSSCCSSQGHLGVVPNPDLG*QKHATL
Trigger: AAGAGTGGCATGCTTCTGGCATCCCAAGTCAGGATT...GGGAACAACCCCCAAATGCCCTTGGGAGGAACAACATGAGCTCAGGAAGCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp GAGGTGACCTCGCCGTGTTTAGAAGGAAGCGTCTTTAAGCTGTGGGTGCCCTCAAATCCTGACTTGGGATaGCAGAAGCATGCCACTCTT +
Preference number: 4 (lower is better)
Translates to: EVTSPCLEGSVFKLWVPSNPDLG*QKHATL
Trigger: AAGAGTGGCATGCTTCTGGCATCCCAAGTCAGGATT...TGAGGGCACCCACAGCTTAAAGACGCTTCCTTCTAAACACGGCGAGGTCACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp CAGAGAGGTTGTGCAGAGATGAGTCAGACTCAGGGGCTGAGTAACAGCAGAGCACCCCATGAGGAAGACTaGATCATGTCACTTCCACTC +
Preference number: 4 (lower is better)
Translates to: QRGCAEMSQTQGLSNSRAPHEED*IMSLPL
Trigger: GAGTGGAAGTGACATGATGCAGTCTTCCTCATGGGG...TGCTCTGCTGTTACTCAGCCCCTGAGTCTGACTCATCTCTGCACAACCTCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp GTGGACGCTCAGAAGCGAGTTTATGTGTGTCTTTTCCTCTATCTGCTGGCTGTGACAATGAATGCTGGCTaGCCAGGGCAGCCCATGAGT +
Preference number: 4 (lower is better)
Translates to: VDAQKRVYVCLFLYLLAVTMNAG*PGQPMS
Trigger: ACTCATGGGCTGCCCTGGGCAGCCAGCATTCATTGT...CACAGCCAGCAGATAGAGGAAAAGACACACATAAACTCGCTTCTGAGCGTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp TCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCAAGGTGGAGTGAATGGTaGGCTGGCCGCGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: SLDHNRLDSLSFLNIGVPRWSEW*AGRAAA
Trigger: GGCGGCGGCGCGGCCAGCGCACCATTCACTCCACCT...TGGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398514.7
CDS-3UTR CCA 90 bp CTGCTCTTCTCTTCAAAGCACTTAGTACACAGGGTTACAGGTGCTACCACTTGGGTCAGGGCTCAGGGGTaGGGATGTCACAAATGCAGC +
Preference number: 4 (lower is better)
Translates to: LLFSSKHLVHRVTGATTWVRAQG*GCHKCS
Trigger: GCTGCATTTGTGACATCCCCACCCCTGAGCCCTGAC...CCAAGTGGTAGCACCTGTAACCCTGTGTACTAAGTGCTTTGAAGAGAAGAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp ACTCTGCCGCAGACTGGTGGTTCTTGGCAGAGACGATCTTCACAGCATCTGGATCAGACTGGTGGTTCTTaGCAGAGACGATCTTCACAG +
Preference number: 4 (lower is better)
Translates to: TLPQTGGSWQRRSSQHLDQTGGS*QRRSSQ
Trigger: CTGTGAAGATCGTCTCTGCCAAGAACCACCAGTCTG...ATCCAGATGCTGTGAAGATCGTCTCTGCCAAGAACCACCAGTCTGCGGCAGAGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523458.1
CDS-3UTR CCA 90 bp CAAAGATGTTGTACTCTGCCGCAGACTGGTGGTTCTTGGCAGAGACGATCTTCATCTGCCGCAGACTGGTaGTTCTTGGCAGAGACGATC +
Preference number: 4 (lower is better)
Translates to: QRCCTLPQTGGSWQRRSSSAADW*FLAETI
Trigger: GATCGTCTCTGCCAAGAACCACCAGTCTGCGGCAGA...TGAAGATCGTCTCTGCCAAGAACCACCAGTCTGCGGCAGAGTACAACATCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523458.1
CDS-3UTR CCA 90 bp AGAGGCTTCCTGAGCTCATGTTGTTCCTCCCAAGGGCATTTGGGGGTTGTTCCCGGGAAACAGGTGGTTTaGAATGGAAAGGTGGAACCA +
Preference number: 4 (lower is better)
Translates to: RGFLSSCCSSQGHLGVVPGKQVV*NGKVEP
Trigger: TGGTTCCACCTTTCCATTCCAAACCACCTGTTTCCC...GGGAACAACCCCCAAATGCCCTTGGGAGGAACAACATGAGCTCAGGAAGCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp GTAGGGGACGTGACAAAGAACAGAACCCAAAGACTGCCTGCCTTCTCGGCAGACTCACTTCCACTCACTTaGGGAGATTCTAGGACTGAG +
Preference number: 4 (lower is better)
Translates to: VGDVTKNRTQRLPAFSADSLPLT*GDSRTE
Trigger: CTCAGTCCTAGAATCTCCCCAAGTGAGTGGAAGTGA...GTCTGCCGAGAAGGCAGGCAGTCTTTGGGTTCTGTTCTTTGTCACGTCCCCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp CAGAGAGGTTGTGCAGAGATGAGTCAGACTCAGGGGCTGAGTAACAGCAGAGCAACAGGTGCTACCACTTaGATTCCCCAGAGCATGGAA +
Preference number: 4 (lower is better)
Translates to: QRGCAEMSQTQGLSNSRATGATT*IPQSME
Trigger: TTCCATGCTCTGGGGAATCCAAGTGGTAGCACCTGT...TGCTCTGCTGTTACTCAGCCCCTGAGTCTGACTCATCTCTGCACAACCTCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp GAATCAAAGGTTCTGGTGGAATGGTTCACTTCGGAAGTCCCAAGGGCAGTGCGGACAGGTGCTACCACTTaGATTCCCCAGAGCATGGAA +
Preference number: 4 (lower is better)
Translates to: ESKVLVEWFTSEVPRAVRTGATT*IPQSME
Trigger: TTCCATGCTCTGGGGAATCCAAGTGGTAGCACCTGT...CCGCACTGCCCTTGGGACTTCCGAAGTGAACCATTCCACCAGAACCTTTGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp CAGAGAGGTTGTGCAGAGATGAGTCAGACTCAGGGGCTGAGTAACAGCAGAGCACAGAGAGTGCAGAAGTaGACGCTCAGAAGCGAGTTT +
Preference number: 4 (lower is better)
Translates to: QRGCAEMSQTQGLSNSRAQRVQK*TLRSEF
Trigger: AAACTCGCTTCTGAGCGTCCACTTCTGCACTCTCTG...TGCTCTGCTGTTACTCAGCCCCTGAGTCTGACTCATCTCTGCACAACCTCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp GAGGTGACCTCGCCGTGTTTAGAAGGAAGCGTCTTTAAGCTGTGGGTGCCCTCAGGTGTCAGCCCTTTGTaGAAACATGACACTCTCAGT +
Preference number: 4 (lower is better)
Translates to: EVTSPCLEGSVFKLWVPSGVSPL*KHDTLS
Trigger: ACTGAGAGTGTCATGTTTCCACAAAGGGCTGACACC...TGAGGGCACCCACAGCTTAAAGACGCTTCCTTCTAAACACGGCGAGGTCACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp TCCCTCTGCTCAAGACTGACTTTGGCTTTCCCAGTTCCCCACTTGACTTTCATAGCACCACATGGTCAATaGTCATGGTGGTGCCACCTG +
Preference number: 4 (lower is better)
Translates to: SLCSRLTLAFPVPHLTFIAPHGQ*SWWCHL
Trigger: CAGGTGGCACCACCATGATCATTGACCATGTGGTGC...TATGAAAGTCAAGTGGGGAACTGGGAAAGCCAAAGTCAGTCTTGAGCAGAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp GAAGACTGCATCATGTCACTTCCACTCACTTGGGGAGATTCTAGGACTGAGACATTTGGCTGGCAATGGTaGTGGCACGGAACACAGCCT +
Preference number: 4 (lower is better)
Translates to: EDCIMSLPLTWGDSRTETFGWQW*WHGTQP
Trigger: AGGCTGTGTTCCGTGCCATCACCATTGCCAGCCAAA...TGTCTCAGTCCTAGAATCTCCCCAAGTGAGTGGAAGTGACATGATGCAGTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp GCGGCTATCTTCCATGGAAATAACGTACGTCATCAACACAATATACAACACCCCCCTAGGGAGCTGTGGTaGTGTGACAGCTGCCACAGC +
Preference number: 4 (lower is better)
Translates to: AAIFHGNNVRHQHNIQHPPRELW*CDSCHS
Trigger: GCTGTGGCAGCTGTCACATCACCACAGCTCCCTAGG...GGGGTGTTGTATATTGTGTTGATGACGTACGTTATTTCCATGGAAGATAGCCGC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp TGTGCCAGGATCGAGAGAATCAAACACAAACTGCCTGTAAGAGAGGCCCTTCATGCAAAGACAGAAGAGTaGGAGGTGACCTCGCCGTGT +
Preference number: 4 (lower is better)
Translates to: CARIERIKHKLPVREALHAKTEE*EVTSPC
Trigger: ACACGGCGAGGTCACCTCTCACTCTTCTGTCTTTGC...ATGAAGGGCCTCTCTTACAGGCAGTTTGTGTTTGATTCTCTCGATCCTGGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp GAGGTGACCTCGCCGTGTTTAGAAGGAAGCGTCTTTAAGCTGTGGGTGCCCTCATCCCAGTTCCCCACTTaGCTTTCATATAAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: EVTSPCLEGSVFKLWVPSSQFPT*LSYKLR
Trigger: TCTCAGCTTATATGAAAGTCAAGTGGGGAACTGGGA...TGAGGGCACCCACAGCTTAAAGACGCTTCCTTCTAAACACGGCGAGGTCACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp AATTTCCCAAACACCCTTTCCACTACCCAAGCCCGTGGCCCTCAGAGAGAACCGCAGAGCATGGAAGTCTaGTCCCAGGTTGAACATATT +
Preference number: 4 (lower is better)
Translates to: NFPNTLSTTQARGPQREPQSMEV*SQVEHI
Trigger: AATATGTTCAACCTGGGATCAGACTTCCATGCTCTG...CGGTTCTCTCTGAGGGCCACGGGCTTGGGTAGTGGAAAGGGTGTTTGGGAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp GCGGCTATCTTCCATGGAAATAACGTACGTCATCAACACAATATACAACACCCCCAGGCCCATCGTACATaGCCCTTGGGACGGCATGCA +
Preference number: 4 (lower is better)
Translates to: AAIFHGNNVRHQHNIQHPQAHRT*PLGRHA
Trigger: TGCATGCCGTCCCAAGGGGCATGTACGATGGGCCTG...GGGGTGTTGTATATTGTGTTGATGACGTACGTTATTTCCATGGAAGATAGCCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp AATTTCCCAAACACCCTTTCCACTACCCAAGCCCGTGGCCCTCAGAGAGAACCGTGCTATGTTCTCAGCTaGTGGCTTTTAAGAGCACCA +
Preference number: 4 (lower is better)
Translates to: NFPNTLSTTQARGPQREPCYVLS*WLLRAP
Trigger: TGGTGCTCTTAAAAGCCAGCAGCTGAGAACATAGCA...CGGTTCTCTCTGAGGGCCACGGGCTTGGGTAGTGGAAAGGGTGTTTGGGAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp GCAAACACTGGCACAATCAAGCAGGTGGAAGAAATGGTTGGGTCTTGGCATTTTTCTTTAAGCTGTGGGTaGCCTCACCACGTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: ANTGTIKQVEEMVGSWHFSLSCG*PHHVGL
Trigger: CAGGCCCACGTGGTGAGGGCACCCACAGCTTAAAGA...AAAATGCCAAGACCCAACCATTTCTTCCACCTGCTTGATTGTGCCAGTGTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp AGAGGCTTCCTGAGCTCATGTTGTTCCTCCCAAGGGCATTTGGGGGTTGTTCCCAAAATGTGCTCCCTCTaGTCAAGACTGACTTTGGCT +
Preference number: 4 (lower is better)
Translates to: RGFLSSCCSSQGHLGVVPKMCSL*SRLTLA
Trigger: AGCCAAAGTCAGTCTTGAGCAGAGGGAGCACATTTT...GGGAACAACCCCCAAATGCCCTTGGGAGGAACAACATGAGCTCAGGAAGCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp CCCATGAGGAAGACTGCATCATGTCACTTCCACTCACTTGGGGAGATTCTAGGACAGCAGAGCAGAGAGTaGAGAAGTGGACGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: PMRKTASCHFHSLGEILGQQSRE*RSGRSE
Trigger: TTCTGAGCGTCCACTTCTGCACTCTCTGCTCTGCTG...TCCTAGAATCTCCCCAAGTGAGTGGAAGTGACATGATGCAGTCTTCCTCATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp GCAAACACTGGCACAATCAAGCAGGTGGAAGAAATGGTTGGGTCTTGGCATTTTGTGCTGAAGGTGCAGTaGGCACTCCCAGATAGCTGC +
Preference number: 4 (lower is better)
Translates to: ANTGTIKQVEEMVGSWHFVLKVQ*ALPDSC
Trigger: GCAGCTATCTGGGAGTGCCCACTGCACCTTCAGCAC...AAAATGCCAAGACCCAACCATTTCTTCCACCTGCTTGATTGTGCCAGTGTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp CCCATGAGGAAGACTGCATCATGTCACTTCCACTCACTTGGGGAGATTCTAGGAAAGATTCCTCACAGGTaGGTTCGGCCGAGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: PMRKTASCHFHSLGEILGKIPHR*VRPSRR
Trigger: TCTCCTACTCGGCCGAACCCACCTGTGAGGAATCTT...TCCTAGAATCTCCCCAAGTGAGTGGAAGTGACATGATGCAGTCTTCCTCATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp CCCATGAGGAAGACTGCATCATGTCACTTCCACTCACTTGGGGAGATTCTAGGAGGCCTGAGCAAACACTaGCACAATCAAGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: PMRKTASCHFHSLGEILGGLSKH*HNQAGG
Trigger: TCCACCTGCTTGATTGTGCCAGTGTTTGCTCAGGCC...TCCTAGAATCTCCCCAAGTGAGTGGAAGTGACATGATGCAGTCTTCCTCATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp ATCCAGCGTGCCTTCCTACACTTGCATGAGGTGCCAGTGAATTCGAAGAGGGCCGAAGACTTATCTTCATaGCACAGAGAGGTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: IQRAFLHLHEVPVNSKRAEDLSS*HREVVQ
Trigger: CTGCACAACCTCTCTGTGCCATGAAGATAAGTCTTC...GGCCCTCTTCGAATTCACTGGCACCTCATGCAAGTGTAGGAAGGCACGCTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp CAGAGAGGTTGTGCAGAGATGAGTCAGACTCAGGGGCTGAGTAACAGCAGAGCAAAGGTTCTGGTGGAATaGTTCACTTCGGAAGTCCCA +
Preference number: 4 (lower is better)
Translates to: QRGCAEMSQTQGLSNSRAKVLVE*FTSEVP
Trigger: TGGGACTTCCGAAGTGAACCATTCCACCAGAACCTT...TGCTCTGCTGTTACTCAGCCCCTGAGTCTGACTCATCTCTGCACAACCTCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp CTGCTCTTCTCTTCAAAGCACTTAGTACACAGGGTTACAGGTGCTACCACTTGGCCTCCCAAGGGCATTTaGGGGTTGTTCCCAGAGCAA +
Preference number: 4 (lower is better)
Translates to: LLFSSKHLVHRVTGATTWPPKGI*GLFPEQ
Trigger: TTGCTCTGGGAACAACCCCCAAATGCCCTTGGGAGG...CCAAGTGGTAGCACCTGTAACCCTGTGTACTAAGTGCTTTGAAGAGAAGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp ATCCAGCGTGCCTTCCTACACTTGCATGAGGTGCCAGTGAATTCGAAGAGGGCCGGCAAAGGACAGCTTTaGAATCAGATAGACGATCCA +
Preference number: 4 (lower is better)
Translates to: IQRAFLHLHEVPVNSKRAGKGQL*NQIDDP
Trigger: TGGATCGTCTATCTGATTCCAAAGCTGTCCTTTGCC...GGCCCTCTTCGAATTCACTGGCACCTCATGCAAGTGTAGGAAGGCACGCTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp GAGGTGACCTCGCCGTGTTTAGAAGGAAGCGTCTTTAAGCTGTGGGTGCCCTCAGGCAAAGGACAGCTTTaGAATCAGATAGACGATCCA +
Preference number: 4 (lower is better)
Translates to: EVTSPCLEGSVFKLWVPSGKGQL*NQIDDP
Trigger: TGGATCGTCTATCTGATTCCAAAGCTGTCCTTTGCC...TGAGGGCACCCACAGCTTAAAGACGCTTCCTTCTAAACACGGCGAGGTCACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR CAA 72 bp TCAAAGATGTTGTACTCTGCCGCAGACTGGTGGTTCTaGGCAGAGACGATCTTCACAGCATCTGGATCCCAG +
Preference number: 4 (lower is better)
Translates to: SKMLYSAADWWF*AETIFTASGSQ
Trigger: CTGGGATCCAGATGCTGTGAAGATCGTCTCTGCCAAGAACCACCAGTCTGCGGCAGAGTACAACATCTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523458.1
CDS-3UTR TCA 90 bp GCAAACACTGGCACAATCAAGCAGGTGGAAGAAATGGTTGGGTCTTGGCATTTTGCTCTCCCAGGCAGGTaGAGATCTCATAGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: ANTGTIKQVEEMVGSWHFALPGR*RSHRAL
Trigger: CAGAGCTCTATGAGATCTTCACCTGCCTGGGAGAGC...AAAATGCCAAGACCCAACCATTTCTTCCACCTGCTTGATTGTGCCAGTGTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp GCAAACACTGGCACAATCAAGCAGGTGGAAGAAATGGTTGGGTCTTGGCATTTTTCCTGGCTTGTGAGATaGGGTCAGCTGCACTCTTGC +
Preference number: 4 (lower is better)
Translates to: ANTGTIKQVEEMVGSWHFSWLVR*GQLHSC
Trigger: GCAAGAGTGCAGCTGACCTCATCTCACAAGCCAGGA...AAAATGCCAAGACCCAACCATTTCTTCCACCTGCTTGATTGTGCCAGTGTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp GAATCAAAGGTTCTGGTGGAATGGTTCACTTCGGAAGTCCCAAGGGCAGTGCGGTCATTCTGCCTCATCTaGGCTAAAATCCTGACTTGG +
Preference number: 4 (lower is better)
Translates to: ESKVLVEWFTSEVPRAVRSFCLI*AKILTW
Trigger: CCAAGTCAGGATTTTAGCTCAGATGAGGCAGAATGA...CCGCACTGCCCTTGGGACTTCCGAAGTGAACCATTCCACCAGAACCTTTGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp GTAGGGGACGTGACAAAGAACAGAACCCAAAGACTGCCTGCCTTCTCGGCAGACGACTTGCTCCAAAACTaGATTTTCAGAAGCAGCATG +
Preference number: 4 (lower is better)
Translates to: VGDVTKNRTQRLPAFSADDLLQN*IFRSSM
Trigger: CATGCTGCTTCTGAAAATTCAGTTTTGGAGCAAGTC...GTCTGCCGAGAAGGCAGGCAGTCTTTGGGTTCTGTTCTTTGTCACGTCCCCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp GTAGGGGACGTGACAAAGAACAGAACCCAAAGACTGCCTGCCTTCTCGGCAGACGTTAGTAATGGTAAGTaGAGAAAGAGAGGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: VGDVTKNRTQRLPAFSADVSNGK*RKRGFL
Trigger: CAGGAAGCCTCTCTTTCTTCACTTACCATTACTAAC...GTCTGCCGAGAAGGCAGGCAGTCTTTGGGTTCTGTTCTTTGTCACGTCCCCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp GGAAATAACGTACGTCATCAACACAATATACAACACCCCTTCCACTCACCTGACTGCATGAGGTGCCAGTaGATTCGAAGAGGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: GNNVRHQHNIQHPFHSPDCMRCQ*IRRGPG
Trigger: TCCCGGCCCTCTTCGAATTCACTGGCACCTCATGCA...GTCAGGTGAGTGGAAGGGGTGTTGTATATTGTGTTGATGACGTACGTTATTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp CAGGTCTGCCATCTTCCTCCGTGCTTTAATGCGCTTGTAGACATAGTCGGAGAATCTTGGCAGCGTTTGTaGTTGTCACAGCCACGAACT +
Preference number: 4 (lower is better)
Translates to: QVCHLPPCFNALVDIVGESWQRL*LSQPRT
Trigger: AGTTCGTGGCTGTGACAAGCACAAACGCTGCCAAGA...TTCTCCGACTATGTCTACAAGCGCATTAAAGCACGGAGGAAGATGGCAGACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523458.1
CDS-3UTR GCA 90 bp AAACAAAGCAATATTCGTAAAGCTAGGCAAGCGAGCGTAACATTGGAGAAACATGCGCCACGATGCGCTTaGTGGCTGAGCGAACCCCCT +
Preference number: 4 (lower is better)
Translates to: KQSNIRKARQASVTLEKHAPRCA*WLSEPP
Trigger: AGGGGGTTCGCTCAGCCAGCAAGCGCATCGTGGCGC...ATGTTTCTCCAATGTTACGCTCGCTTGCCTAGCTTTACGAATATTGCTTTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
CDS-3UTR GCA 90 bp AGAAAACAAAGCAATATTCGTAAAGCTAGGCAAGCGAGCGTAACATTGGAGAAACTGGGGGCGCCACGATaGGCTTGCTGGCTGAGCGAA +
Preference number: 4 (lower is better)
Translates to: RKQSNIRKARQASVTLEKLGAPR*ACWLSE
Trigger: TTCGCTCAGCCAGCAAGCGCATCGTGGCGCCCCCAG...TTTCTCCAATGTTACGCTCGCTTGCCTAGCTTTACGAATATTGCTTTGTTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
CDS-3UTR GCA 90 bp CTCCCTCTGCTCAAGACTGACTTTGGCTTTCCCAGTTCCCCACTTGACTTTCATGTCTTTTCCTCTATCTaGTGGCTGTGGCTGGTACTG +
Preference number: 4 (lower is better)
Translates to: LPLLKTDFGFPSSPLDFHVFSSI*WLWLVL
Trigger: CAGTACCAGCCACAGCCAGCAGATAGAGGAAAAGAC...ATGAAAGTCAAGTGGGGAACTGGGAAAGCCAAAGTCAGTCTTGAGCAGAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp CCAGGGCAGCCCATGAGTGTATCTGGGACTCAAGCTGGAGTTTTCCAGGGGAGAAGCAAGGAAATCTTGTaGAGAATCAAAGGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: PGQPMSVSGTQAGVFQGRSKEIL*RIKGSG
Trigger: ACCAGAACCTTTGATTCTGCACAAGATTTCCTTGCT...TCTCCCCTGGAAAACTCCAGCTTGAGTCCCAGATACACTCATGGGCTGCCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp GAAGACTGCATCATGTCACTTCCACTCACTTGGGGAGATTCTAGGACTGAGACAGGCTCAGGCACCACATaGTCAATGATCATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: EDCIMSLPLTWGDSRTETGSGTT*SMIMVV
Trigger: CACCACCATGATCATTGACCATGTGGTGCCTGAGCC...TGTCTCAGTCCTAGAATCTCCCCAAGTGAGTGGAAGTGACATGATGCAGTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp GCAAACACTGGCACAATCAAGCAGGTGGAAGAAATGGTTGGGTCTTGGCATTTTAGCTTCCAGCTCTTCTaGCCTGCTCAGTACATGGCC +
Preference number: 4 (lower is better)
Translates to: ANTGTIKQVEEMVGSWHFSFQLF*PAQYMA
Trigger: GGCCATGTACTGAGCAGGCCAGAAGAGCTGGAAGCT...AAAATGCCAAGACCCAACCATTTCTTCCACCTGCTTGATTGTGCCAGTGTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp GCGGCTATCTTCCATGGAAATAACGTACGTCATCAACACAATATACAACACCCCGTCAGGGCTCAGGGGTaGGGATGTCACAAATGCAGC +
Preference number: 4 (lower is better)
Translates to: AAIFHGNNVRHQHNIQHPVRAQG*GCHKCS
Trigger: GCTGCATTTGTGACATCCCCACCCCTGAGCCCTGAC...GGGGTGTTGTATATTGTGTTGATGACGTACGTTATTTCCATGGAAGATAGCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp GCGGCTATCTTCCATGGAAATAACGTACGTCATCAACACAATATACAACACCCCGCTCCTCCACACCATTaGTGCCCTCAGGAATGGCTG +
Preference number: 4 (lower is better)
Translates to: AAIFHGNNVRHQHNIQHPAPPHH*CPQEWL
Trigger: CAGCCATTCCTGAGGGCACCAATGGTGTGGAGGAGC...GGGGTGTTGTATATTGTGTTGATGACGTACGTTATTTCCATGGAAGATAGCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp GTCAGAACCCACAGATATTCTTCCCTTGCGGGGATACAGGTTGAAGATCTTGGCAGCATGATCTTGCCCTaGCAGATGACAACCAGAGGA +
Preference number: 4 (lower is better)
Translates to: VRTHRYSSLAGIQVEDLGSMILP*QMTTRG
Trigger: TCCTCTGGTTGTCATCTGCCAGGGCAAGATCATGCT...GCCAAGATCTTCAACCTGTATCCCCGCAAGGGAAGAATATCTGTGGGTTCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523458.1
CDS-3UTR CCA 90 bp GGAAATAACGTACGTCATCAACACAATATACAACACCCCTTCCACTCACCTGACCACCTTTGGGGGTGGTaGTCAGGTCAAACACAGGCC +
Preference number: 4 (lower is better)
Translates to: GNNVRHQHNIQHPFHSPDHLWGW*SGQTQA
Trigger: GGCCTGTGTTTGACCTGACCACCACCCCCAAAGGTG...GTCAGGTGAGTGGAAGGGGTGTTGTATATTGTGTTGATGACGTACGTTATTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp TGTGCCAGGATCGAGAGAATCAAACACAAACTGCCTGTAAGAGAGGCCCTTCATAAGATTCCTCACAGGTaGGTTCGGCCGAGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: CARIERIKHKLPVREALHKIPHR*VRPSRR
Trigger: TCTCCTACTCGGCCGAACCCACCTGTGAGGAATCTT...ATGAAGGGCCTCTCTTACAGGCAGTTTGTGTTTGATTCTCTCGATCCTGGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp ATCCAGCGTGCCTTCCTACACTTGCATGAGGTGCCAGTGAATTCGAAGAGGGCCTATGTTCTCAGCTGCTaGCTTTTAAGAGCACCAAAG +
Preference number: 4 (lower is better)
Translates to: IQRAFLHLHEVPVNSKRAYVLSC*LLRAPK
Trigger: CTTTGGTGCTCTTAAAAGCCAGCAGCTGAGAACATA...GGCCCTCTTCGAATTCACTGGCACCTCATGCAAGTGTAGGAAGGCACGCTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp GAGGTGACCTCGCCGTGTTTAGAAGGAAGCGTCTTTAAGCTGTGGGTGCCCTCATATGTTCTCAGCTGCTaGCTTTTAAGAGCACCAAAG +
Preference number: 4 (lower is better)
Translates to: EVTSPCLEGSVFKLWVPSYVLSC*LLRAPK
Trigger: CTTTGGTGCTCTTAAAAGCCAGCAGCTGAGAACATA...TGAGGGCACCCACAGCTTAAAGACGCTTCCTTCTAAACACGGCGAGGTCACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp CTGCTCTTCTCTTCAAAGCACTTAGTACACAGGGTTACAGGTGCTACCACTTGGGGATTCCCCAGAGCATaGAAGTCTGATCCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: LLFSSKHLVHRVTGATTWGFPRA*KSDPRL
Trigger: CAACCTGGGATCAGACTTCCATGCTCTGGGGAATCC...CCAAGTGGTAGCACCTGTAACCCTGTGTACTAAGTGCTTTGAAGAGAAGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR CAA 72 bp AAAGCACTTAGTACACAGGGTTACAGGTGCTACCACTaGGATTCCCCAGAGCATGGAAGTCTGATCCCAGGT +
Preference number: 4 (lower is better)
Translates to: KALSTQGYRCYH*DSPEHGSLIPG
Trigger: ACCTGGGATCAGACTTCCATGCTCTGGGGAATCCAAGTGGTAGCACCTGTAACCCTGTGTACTAAGTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp ATAACGTACGTCATCAACACAATATACAACACCCCTTCCACTCACCTGACCCACCTTTCAGGTGCCCCATaGGGAAGACTGCATCATGTC +
Preference number: 4 (lower is better)
Translates to: ITYVINTIYNTPSTHLTHLSGAP*GRLHHV
Trigger: GACATGATGCAGTCTTCCTCATGGGGCACCTGAAAG...GTGGGTCAGGTGAGTGGAAGGGGTGTTGTATATTGTGTTGATGACGTACGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp ATAACGTACGTCATCAACACAATATACAACACCCCTTCCACTCACCTGACCCACGAAAGAGAGGCTTCCTaGGCTCATGTTGTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: ITYVINTIYNTPSTHLTHEREAS*AHVVPP
Trigger: GGGAGGAACAACATGAGCTCAGGAAGCCTCTCTTTC...GTGGGTCAGGTGAGTGGAAGGGGTGTTGTATATTGTGTTGATGACGTACGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp ATAACGTACGTCATCAACACAATATACAACACCCCTTCCACTCACCTGACCCACAGGGCTTCTCAGGGATaGGTGAAAATCCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: ITYVINTIYNTPSTHLTHRASQG*VKIQAQ
Trigger: CTGAGCCTGGATTTTCACTCATCCCTGAGAAGCCCT...GTGGGTCAGGTGAGTGGAAGGGGTGTTGTATATTGTGTTGATGACGTACGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp GTTGTTCCCAGAGCAAGGAAATCTTGTGCAGAATCAAAGGTTCTGGTGGAATGGTCCCCATTTCCAACATaGGGGTTTGCTCCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: VVPRARKSCAESKVLVEWSPFPT*GFAPGQ
Trigger: TTGCCCAGGAGCAAACCCGCATGTTGGAAATGGGGA...CCATTCCACCAGAACCTTTGATTCTGCACAAGATTTCCTTGCTCTGGGAACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp AAACAAAGCAATATTCGTAAAGCTAGGCAAGCGAGCGTAACATTGGAGAAACATGCACTCCCAGATAGCTaGAGATCCCCGCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: KQSNIRKARQASVTLEKHALPDS*RSPLAS
Trigger: GCTGGCCAGCGGGGATCTGCAGCTATCTGGGAGTGC...ATGTTTCTCCAATGTTACGCTCGCTTGCCTAGCTTTACGAATATTGCTTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
CDS-3UTR GCA 90 bp GCGGCTATCTTCCATGGAAATAACGTACGTCATCAACACAATATACAACACCCCGACGGCATGCAGGTCTaGCATCTTCCTCCGTGCTTT +
Preference number: 4 (lower is better)
Translates to: AAIFHGNNVRHQHNIQHPDGMQV*HLPPCF
Trigger: AAAGCACGGAGGAAGATGGCAGACCTGCATGCCGTC...GGGGTGTTGTATATTGTGTTGATGACGTACGTTATTTCCATGGAAGATAGCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp ATTGATTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTCAGAGCCTGCGGGGGTaGCACCTTTGGGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: IDSLDHNRLDSLSFLNIGQSLRG*HLWGWW
Trigger: CCACCACCCCCAAAGGTGGCACCCCCGCAGGCTCTG...ACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAATCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
CDS-3UTR GCA 90 bp GAGGTGACCTCGCCGTGTTTAGAAGGAAGCGTCTTTAAGCTGTGGGTGCCCTCATCTTTGAGGAAGGCTTaGTTAACTCAGAGATGTGAT +
Preference number: 4 (lower is better)
Translates to: EVTSPCLEGSVFKLWVPSSLRKA*LTQRCD
Trigger: ATCACATCTCTGAGTTAAGCAAGCCTTCCTCAAAGA...TGAGGGCACCCACAGCTTAAAGACGCTTCCTTCTAAACACGGCGAGGTCACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp CTGCTCTTCTCTTCAAAGCACTTAGTACACAGGGTTACAGGTGCTACCACTTGGACACAGGGTTACAGGTaGTACCACTTGGATTCCCCA +
Preference number: 4 (lower is better)
Translates to: LLFSSKHLVHRVTGATTWTQGYR*YHLDSP
Trigger: TGGGGAATCCAAGTGGTAGCACCTGTAACCCTGTGT...CCAAGTGGTAGCACCTGTAACCCTGTGTACTAAGTGCTTTGAAGAGAAGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp TGTGCCAGGATCGAGAGAATCAAACACAAACTGCCTGTAAGAGAGGCCCTTCATGTCTTTTCCTCTATCTaGTGGCTGTGGCTGGTACTG +
Preference number: 4 (lower is better)
Translates to: CARIERIKHKLPVREALHVFSSI*WLWLVL
Trigger: CAGTACCAGCCACAGCCAGCAGATAGAGGAAAAGAC...ATGAAGGGCCTCTCTTACAGGCAGTTTGTGTTTGATTCTCTCGATCCTGGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp ATAACGTACGTCATCAACACAATATACAACACCCCTTCCACTCACCTGACCCACAGAACCGGGATGGATTaGCATCTGGGTTCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: ITYVINTIYNTPSTHLTHRTGMD*HLGSEA
Trigger: TGCCTCTGAACCCAGATGGCAATCCATCCCGGTTCT...GTGGGTCAGGTGAGTGGAAGGGGTGTTGTATATTGTGTTGATGACGTACGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp GGAAATAACGTACGTCATCAACACAATATACAACACCCCTTCCACTCACCTGACACAATGAATGCTGGCTaGCCAGGGCAGCCCATGAGT +
Preference number: 4 (lower is better)
Translates to: GNNVRHQHNIQHPFHSPDTMNAG*PGQPMS
Trigger: ACTCATGGGCTGCCCTGGGCAGCCAGCATTCATTGT...GTCAGGTGAGTGGAAGGGGTGTTGTATATTGTGTTGATGACGTACGTTATTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp TCAGAACCCACAGATATTCTTCCCTTGCGGGGATACAGGTTGAAGATCTTGGCAGATCTTCACAGCATCTaGATCCCAGATGACGAGGTC +
Preference number: 4 (lower is better)
Translates to: SEPTDILPLRGYRLKILADLHSI*IPDDEV
Trigger: GACCTCGTCATCTGGGATCCAGATGCTGTGAAGATC...TGCCAAGATCTTCAACCTGTATCCCCGCAAGGGAAGAATATCTGTGGGTTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523458.1
CDS-3UTR CCA 90 bp TCCCTCTGCTCAAGACTGACTTTGGCTTTCCCAGTTCCCCACTTGACTTTCATAAGCATGATCTTGCCCTaGCAGATGACAACCAGAGGA +
Preference number: 4 (lower is better)
Translates to: SLCSRLTLAFPVPHLTFISMILP*QMTTRG
Trigger: TCCTCTGGTTGTCATCTGCCAGGGCAAGATCATGCT...TATGAAAGTCAAGTGGGGAACTGGGAAAGCCAAAGTCAGTCTTGAGCAGAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp CTCCCTCTGCTCAAGACTGACTTTGGCTTTCCCAGTTCCCCACTTGACTTTCATTCACTTCCACTCACTTaGGGAGATTCTAGGACTGAG +
Preference number: 4 (lower is better)
Translates to: LPLLKTDFGFPSSPLDFHSLPLT*GDSRTE
Trigger: CTCAGTCCTAGAATCTCCCCAAGTGAGTGGAAGTGA...ATGAAAGTCAAGTGGGGAACTGGGAAAGCCAAAGTCAGTCTTGAGCAGAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp GAATCAAAGGTTCTGGTGGAATGGTTCACTTCGGAAGTCCCAAGGGCAGTGCGGAATCAAAGGTTCTGGTaGAATGGTTCACTTCGGAAG +
Preference number: 4 (lower is better)
Translates to: ESKVLVEWFTSEVPRAVRNQRFW*NGSLRK
Trigger: CTTCCGAAGTGAACCATTCCACCAGAACCTTTGATT...CCGCACTGCCCTTGGGACTTCCGAAGTGAACCATTCCACCAGAACCTTTGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp TTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCCACTACCCAAGCCCGTaGCCCTCAGAGAGAACCGGG +
Preference number: 4 (lower is better)
Translates to: FFRSQPFGFAFLLKYRCTHYPSP*PSERTG
Trigger: CCCGGTTCTCTCTGAGGGCCACGGGCTTGGGTAGTG...GGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp TGTGCCAGGATCGAGAGAATCAAACACAAACTGCCTGTAAGAGAGGCCCTTCATTTGTGGCAAGGAAGTTaGGAATTGCCCACCCTACTG +
Preference number: 4 (lower is better)
Translates to: CARIERIKHKLPVREALHLWQGS*ELPTLL
Trigger: CAGTAGGGTGGGCAATTCCCAACTTCCTTGCCACAA...ATGAAGGGCCTCTCTTACAGGCAGTTTGTGTTTGATTCTCTCGATCCTGGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp TGTGCCAGGATCGAGAGAATCAAACACAAACTGCCTGTAAGAGAGGCCCTTCATTTTTGCTGCGCCAGCTaGGACCCCATAAGACAAGAA +
Preference number: 4 (lower is better)
Translates to: CARIERIKHKLPVREALHFCCAS*DPIRQE
Trigger: TTCTTGTCTTATGGGGTCCCAGCTGGCGCAGCAAAA...ATGAAGGGCCTCTCTTACAGGCAGTTTGTGTTTGATTCTCTCGATCCTGGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398514.7
CDS-3UTR TCA 90 bp ATAACGTACGTCATCAACACAATATACAACACCCCTTCCACTCACCTGACCCACCCTCAGGAATGGCTGTaGAGTTGTCCTTCCCAATTG +
Preference number: 4 (lower is better)
Translates to: ITYVINTIYNTPSTHLTHPQEWL*SCPSQL
Trigger: CAATTGGGAAGGACAACTTCACAGCCATTCCTGAGG...GTGGGTCAGGTGAGTGGAAGGGGTGTTGTATATTGTGTTGATGACGTACGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp TTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCATTTGATGCGCTTGCTGGCTaGGCGAACCCCCTCATCCAC +
Preference number: 4 (lower is better)
Translates to: LDHNRLDSLSFLNIGVPFDALAG*ANPLIH
Trigger: GTGGATGAGGGGGTTCGCTCAGCCAGCAAGCGCATC...AAATGGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
CDS-3UTR TCA 90 bp AAACAAAGCAATATTCGTAAAGCTAGGCAAGCGAGCGTAACATTGGAGAAACATGGAGCTGTGGTGATGTaGCAGCTGCCACAGCGGCTA +
Preference number: 4 (lower is better)
Translates to: KQSNIRKARQASVTLEKHGAVVM*QLPQRL
Trigger: TAGCCGCTGTGGCAGCTGTCACATCACCACAGCTCC...ATGTTTCTCCAATGTTACGCTCGCTTGCCTAGCTTTACGAATATTGCTTTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp TGTGCCAGGATCGAGAGAATCAAACACAAACTGCCTGTAAGAGAGGCCCTTCATTCTGAGCTAAAATCCTaGCTTGGGATGCCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: CARIERIKHKLPVREALHSELKS*LGMPEA
Trigger: TGCTTCTGGCATCCCAAGTCAGGATTTTAGCTCAGA...ATGAAGGGCCTCTCTTACAGGCAGTTTGTGTTTGATTCTCTCGATCCTGGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp GTGGACGCTCAGAAGCGAGTTTATGTGTGTCTTTTCCTCTATCTGCTGGCTGTGCAGAGCATGGAAGTCTaGTCCCAGGTTGAACATATT +
Preference number: 4 (lower is better)
Translates to: VDAQKRVYVCLFLYLLAVQSMEV*SQVEHI
Trigger: AATATGTTCAACCTGGGATCAGACTTCCATGCTCTG...CACAGCCAGCAGATAGAGGAAAAGACACACATAAACTCGCTTCTGAGCGTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp AGAGGCTTCCTGAGCTCATGTTGTTCCTCCCAAGGGCATTTGGGGGTTGTTCCCTCTACTACGGGTAACTaGTTTAACAATTTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: RGFLSSCCSSQGHLGVVPSTTGN*FNNFPN
Trigger: GTTTGGGAAATTGTTAAATCAGTTACCCGTAGTAGA...GGGAACAACCCCCAAATGCCCTTGGGAGGAACAACATGAGCTCAGGAAGCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp CCCATGAGGAAGACTGCATCATGTCACTTCCACTCACTTGGGGAGATTCTAGGACCCTTTGTGGAAACATaGCACTCTCAGTATAGACAG +
Preference number: 4 (lower is better)
Translates to: PMRKTASCHFHSLGEILGPFVET*HSQYRQ
Trigger: CTGTCTATACTGAGAGTGTCATGTTTCCACAAAGGG...TCCTAGAATCTCCCCAAGTGAGTGGAAGTGACATGATGCAGTCTTCCTCATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp ATAACGTACGTCATCAACACAATATACAACACCCCTTCCACTCACCTGACCCACCTTCTCAGGGATGAGTaGAAATCCAGGCTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: ITYVINTIYNTPSTHLTHLLRDE*KSRLRC
Trigger: ACACCTGAGCCTGGATTTTCACTCATCCCTGAGAAG...GTGGGTCAGGTGAGTGGAAGGGGTGTTGTATATTGTGTTGATGACGTACGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp ATAACGTACGTCATCAACACAATATACAACACCCCTTCCACTCACCTGACCCACTCCTTGATGAGGTTCTaGACTTCCTGCTTGACGCTG +
Preference number: 4 (lower is better)
Translates to: ITYVINTIYNTPSTHLTHSLMRF*TSCLTL
Trigger: CAGCGTCAAGCAGGAAGTGCAGAACCTCATCAAGGA...GTGGGTCAGGTGAGTGGAAGGGGTGTTGTATATTGTGTTGATGACGTACGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp TTGAGGCTTATTGATTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAGCACTCCCAGATAGCTaGAGATCCCCGCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LRLIDSLDHNRLDSLSFLALPDS*RSPLAS
Trigger: GCTGGCCAGCGGGGATCTGCAGCTATCTGGGAGTGC...TAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAATCAATAAGCCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
CDS-3UTR GCA 90 bp AGAAAACAAAGCAATATTCGTAAAGCTAGGCAAGCGAGCGTAACATTGGAGAAACAGGCCCATCGTACATaGCCCTTGGGACGGCATGCA +
Preference number: 4 (lower is better)
Translates to: RKQSNIRKARQASVTLEKQAHRT*PLGRHA
Trigger: TGCATGCCGTCCCAAGGGGCATGTACGATGGGCCTG...TTTCTCCAATGTTACGCTCGCTTGCCTAGCTTTACGAATATTGCTTTGTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
CDS-3UTR GCA 90 bp GTGGACGCTCAGAAGCGAGTTTATGTGTGTCTTTTCCTCTATCTGCTGGCTGTGCCACTCTTCTCGGTTTaGAAAGACAGAAGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: VDAQKRVYVCLFLYLLAVPLFSV*KDRRVR
Trigger: TCTCACTCTTCTGTCTTTGCAAACCGAGAAGAGTGG...CACAGCCAGCAGATAGAGGAAAAGACACACATAAACTCGCTTCTGAGCGTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp CCCATGAGGAAGACTGCATCATGTCACTTCCACTCACTTGGGGAGATTCTAGGACTAATTTCTTTCAGGTaGCCCATGAGGAAGACTGCA +
Preference number: 4 (lower is better)
Translates to: PMRKTASCHFHSLGEILGLISFR*PMRKTA
Trigger: TGCAGTCTTCCTCATGGGGCACCTGAAAGAAATTAG...TCCTAGAATCTCCCCAAGTGAGTGGAAGTGACATGATGCAGTCTTCCTCATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp GCAAACACTGGCACAATCAAGCAGGTGGAAGAAATGGTTGGGTCTTGGCATTTTCAGTACATGGCCTTCTaGGCCAGTTATCCCCATTTC +
Preference number: 4 (lower is better)
Translates to: ANTGTIKQVEEMVGSWHFQYMAF*ASYPHF
Trigger: GAAATGGGGATAACTGGCCCAGAAGGCCATGTACTG...AAAATGCCAAGACCCAACCATTTCTTCCACCTGCTTGATTGTGCCAGTGTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp GTTGTTCCCAGAGCAAGGAAATCTTGTGCAGAATCAAAGGTTCTGGTGGAATGGTTCCCAATTGCTTTCTaGGCAGTGCTGAAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: VVPRARKSCAESKVLVEWFPIAF*AVLKVQ
Trigger: CTGCACCTTCAGCACTGCCCAGAAAGCAATTGGGAA...CCATTCCACCAGAACCTTTGATTCTGCACAAGATTTCCTTGCTCTGGGAACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp TTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCATTTCGGGGGTGCCACCTTTaGGGGTGGTGGTCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: LDHNRLDSLSFLNIGVPFRGCHL*GWWSGQ
Trigger: TTGACCTGACCACCACCCCCAAAGGTGGCACCCCCG...AAATGGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
CDS-3UTR CCA 90 bp GAAGACTGCATCATGTCACTTCCACTCACTTGGGGAGATTCTAGGACTGAGACATTGCATGCATGTAAATaGGGGGAGGGGAGTCAAACA +
Preference number: 4 (lower is better)
Translates to: EDCIMSLPLTWGDSRTETLHACK*GEGSQT
Trigger: TGTTTGACTCCCCTCCCCCCATTTACATGCATGCAA...TGTCTCAGTCCTAGAATCTCCCCAAGTGAGTGGAAGTGACATGATGCAGTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp GTTGTTCCCAGAGCAAGGAAATCTTGTGCAGAATCAAAGGTTCTGGTGGAATGGGGAAGGGGAAACAGGTaGTTTGGAATGGAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: VVPRARKSCAESKVLVEWGRGNR*FGMERW
Trigger: CCACCTTTCCATTCCAAACCACCTGTTTCCCCTTCC...CCATTCCACCAGAACCTTTGATTCTGCACAAGATTTCCTTGCTCTGGGAACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp GCGGCTATCTTCCATGGAAATAACGTACGTCATCAACACAATATACAACACCCCTCTGCTGGCTGTGGCTaGTACTGCAACCTATCCCAA +
Preference number: 4 (lower is better)
Translates to: AAIFHGNNVRHQHNIQHPSAGCG*YCNLSQ
Trigger: TTGGGATAGGTTGCAGTACCAGCCACAGCCAGCAGA...GGGGTGTTGTATATTGTGTTGATGACGTACGTTATTTCCATGGAAGATAGCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp GCAAACACTGGCACAATCAAGCAGGTGGAAGAAATGGTTGGGTCTTGGCATTTTCAGAGAGTGCAGAAGTaGACGCTCAGAAGCGAGTTT +
Preference number: 4 (lower is better)
Translates to: ANTGTIKQVEEMVGSWHFQRVQK*TLRSEF
Trigger: AAACTCGCTTCTGAGCGTCCACTTCTGCACTCTCTG...AAAATGCCAAGACCCAACCATTTCTTCCACCTGCTTGATTGTGCCAGTGTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp GTGGACGCTCAGAAGCGAGTTTATGTGTGTCTTTTCCTCTATCTGCTGGCTGTGGAAGACTTATCTTCATaGCACAGAGAGGTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: VDAQKRVYVCLFLYLLAVEDLSS*HREVVQ
Trigger: CTGCACAACCTCTCTGTGCCATGAAGATAAGTCTTC...CACAGCCAGCAGATAGAGGAAAAGACACACATAAACTCGCTTCTGAGCGTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp GTGGACGCTCAGAAGCGAGTTTATGTGTGTCTTTTCCTCTATCTGCTGGCTGTGCAGAATCAAAGGTTCTaGTGGAATGGTTCACTTCGG +
Preference number: 4 (lower is better)
Translates to: VDAQKRVYVCLFLYLLAVQNQRF*WNGSLR
Trigger: CCGAAGTGAACCATTCCACCAGAACCTTTGATTCTG...CACAGCCAGCAGATAGAGGAAAAGACACACATAAACTCGCTTCTGAGCGTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp AATTTCCCAAACACCCTTTCCACTACCCAAGCCCGTGGCCCTCAGAGAGAACCGAGGGATTTCTATGCTTaGAGAGTTAGTAATGGTAAG +
Preference number: 4 (lower is better)
Translates to: NFPNTLSTTQARGPQREPRDFYA*RVSNGK
Trigger: CTTACCATTACTAACTCTCCAAGCATAGAAATCCCT...CGGTTCTCTCTGAGGGCCACGGGCTTGGGTAGTGGAAAGGGTGTTTGGGAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp TGTGCCAGGATCGAGAGAATCAAACACAAACTGCCTGTAAGAGAGGCCCTTCATGGATGGATTGCCATCTaGGTTCAGAGGCAATATGAG +
Preference number: 4 (lower is better)
Translates to: CARIERIKHKLPVREALHGWIAI*VQRQYE
Trigger: CTCATATTGCCTCTGAACCCAGATGGCAATCCATCC...ATGAAGGGCCTCTCTTACAGGCAGTTTGTGTTTGATTCTCTCGATCCTGGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp GCAAACACTGGCACAATCAAGCAGGTGGAAGAAATGGTTGGGTCTTGGCATTTTTTGTGGCAAGGAAGTTaGGAATTGCCCACCCTACTG +
Preference number: 4 (lower is better)
Translates to: ANTGTIKQVEEMVGSWHFLWQGS*ELPTLL
Trigger: CAGTAGGGTGGGCAATTCCCAACTTCCTTGCCACAA...AAAATGCCAAGACCCAACCATTTCTTCCACCTGCTTGATTGTGCCAGTGTTTGC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp GAAGACTGCATCATGTCACTTCCACTCACTTGGGGAGATTCTAGGACTGAGACAATCTGGGACTCAAGCTaGAGTTTTCCAGGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: EDCIMSLPLTWGDSRTETIWDSS*SFPGEK
Trigger: TTTCTCCCCTGGAAAACTCCAGCTTGAGTCCCAGAT...TGTCTCAGTCCTAGAATCTCCCCAAGTGAGTGGAAGTGACATGATGCAGTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp CCCATGAGGAAGACTGCATCATGTCACTTCCACTCACTTGGGGAGATTCTAGGAAGGCTTGAGGCTTATTaGTTCTTTAGATCACAACCG +
Preference number: 4 (lower is better)
Translates to: PMRKTASCHFHSLGEILGRLEAY*FFRSQP
Trigger: CGGTTGTGATCTAAAGAATCAATAAGCCTCAAGCCT...TCCTAGAATCTCCCCAAGTGAGTGGAAGTGACATGATGCAGTCTTCCTCATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp AAACAAAGCAATATTCGTAAAGCTAGGCAAGCGAGCGTAACATTGGAGAAACATTGCATGAGGTGCCAGTaGATTCGAAGAGGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: KQSNIRKARQASVTLEKHCMRCQ*IRRGPG
Trigger: TCCCGGCCCTCTTCGAATTCACTGGCACCTCATGCA...ATGTTTCTCCAATGTTACGCTCGCTTGCCTAGCTTTACGAATATTGCTTTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp GTTGTTCCCAGAGCAAGGAAATCTTGTGCAGAATCAAAGGTTCTGGTGGAATGGCTTCCTACACTTGCATaGGGTGCCAGTGAATTCGAA +
Preference number: 4 (lower is better)
Translates to: VVPRARKSCAESKVLVEWLPTLA*GASEFE
Trigger: TTCGAATTCACTGGCACCTCATGCAAGTGTAGGAAG...CCATTCCACCAGAACCTTTGATTCTGCACAAGATTTCCTTGCTCTGGGAACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp GCAAACACTGGCACAATCAAGCAGGTGGAAGAAATGGTTGGGTCTTGGCATTTTCAGTATAGACAGTCGTaGAGAACAAGGCTGAGGGAT +
Preference number: 4 (lower is better)
Translates to: ANTGTIKQVEEMVGSWHFQYRQS*RTRLRD
Trigger: ATCCCTCAGCCTTGTTCTTCACGACTGTCTATACTG...AAAATGCCAAGACCCAACCATTTCTTCCACCTGCTTGATTGTGCCAGTGTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp TTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCCCACGTTGCAGAACATaGCGCCGTATTTCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: FFRSQPFGFAFLLKYRCTPRCRT*RRISAA
Trigger: CGCGGCAGAAATACGGCGGCATGTTCTGCAACGTGG...GGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343218.10
CDS-3UTR GCA 90 bp TTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCTTGGGGCCGAGGTTCTaGAACACCTCTTTGCCGGTG +
Preference number: 4 (lower is better)
Translates to: FFRSQPFGFAFLLKYRCTLGPRF*NTSLPV
Trigger: CACCGGCAAAGAGGTGTTGCAGAACCTCGGCCCCAA...GGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343218.10
CDS-3UTR GCA 90 bp GGAAATAACGTACGTCATCAACACAATATACAACACCCCTTCCACTCACCTGACTCCAACATGCGGGTTTaGTCCTGGGCAATGATATCC +
Preference number: 4 (lower is better)
Translates to: GNNVRHQHNIQHPFHSPDSNMRV*SWAMIS
Trigger: GGATATCATTGCCCAGGAGCAAACCCGCATGTTGGA...GTCAGGTGAGTGGAAGGGGTGTTGTATATTGTGTTGATGACGTACGTTATTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp TCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCACATTTGCTCTGTCCCTaGCTGGCCTTCCCAACCCAG +
Preference number: 4 (lower is better)
Translates to: SLDHNRLDSLSFLNIGVPHLLCP*LAFPTQ
Trigger: CTGGGTTGGGAAGGCCAGGCAGGGACAGAGCAAATG...TGGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp GGAAATAACGTACGTCATCAACACAATATACAACACCCCTTCCACTCACCTGACAAGAGAAGTGTCATTTaGTCTGTCCCTGCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: GNNVRHQHNIQHPFHSPDKRSVI*SVPAWP
Trigger: AGGCCAGGCAGGGACAGAGCAAATGACACTTCTCTT...GTCAGGTGAGTGGAAGGGGTGTTGTATATTGTGTTGATGACGTACGTTATTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp TCCCTCTGCTCAAGACTGACTTTGGCTTTCCCAGTTCCCCACTTGACTTTCATACCACTCTTCTCGGTTTaGAAAGACAGAAGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: SLCSRLTLAFPVPHLTFIPLFSV*KDRRVR
Trigger: TCTCACTCTTCTGTCTTTGCAAACCGAGAAGAGTGG...TATGAAAGTCAAGTGGGGAACTGGGAAAGCCAAAGTCAGTCTTGAGCAGAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp GCGGCTATCTTCCATGGAAATAACGTACGTCATCAACACAATATACAACACCCCCCCCATGAGGAAGACTaGATCATGTCACTTCCACTC +
Preference number: 4 (lower is better)
Translates to: AAIFHGNNVRHQHNIQHPPHEED*IMSLPL
Trigger: GAGTGGAAGTGACATGATGCAGTCTTCCTCATGGGG...GGGGTGTTGTATATTGTGTTGATGACGTACGTTATTTCCATGGAAGATAGCCGC
47% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp GTTGTTCCCAGAGCAAGGAAATCTTGTGCAGAATCAAAGGTTCTGGTGGAATGGAAGGTGTCTGAGGCCTaGTCTTCTCTTCAAAGCACT +
Preference number: 4 (lower is better)
Translates to: VVPRARKSCAESKVLVEWKVSEA*SSLQST
Trigger: AGTGCTTTGAAGAGAAGAGCAGGCCTCAGACACCTT...CCATTCCACCAGAACCTTTGATTCTGCACAAGATTTCCTTGCTCTGGGAACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp GCGGCTATCTTCCATGGAAATAACGTACGTCATCAACACAATATACAACACCCCGGCTGTGGCTGGTACTaGAACCTATCCCAAAGTAAC +
Preference number: 4 (lower is better)
Translates to: AAIFHGNNVRHQHNIQHPGCGWY*NLSQSN
Trigger: GTTACTTTGGGATAGGTTGCAGTACCAGCCACAGCC...GGGGTGTTGTATATTGTGTTGATGACGTACGTTATTTCCATGGAAGATAGCCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp CTCCCTCTGCTCAAGACTGACTTTGGCTTTCCCAGTTCCCCACTTGACTTTCATGGTCATTCCCTTATATaGCATCTGGAAGTGAGTATG +
Preference number: 4 (lower is better)
Translates to: LPLLKTDFGFPSSPLDFHGHSLI*HLEVSM
Trigger: CATACTCACTTCCAGATGCCATATAAGGGAATGACC...ATGAAAGTCAAGTGGGGAACTGGGAAAGCCAAAGTCAGTCTTGAGCAGAGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp GGAAATAACGTACGTCATCAACACAATATACAACACCCCTTCCACTCACCTGACATGCGGGTTTGCTCCTaGGCAATGATATCCCCATTC +
Preference number: 4 (lower is better)
Translates to: GNNVRHQHNIQHPFHSPDMRVCS*AMISPF
Trigger: GAATGGGGATATCATTGCCCAGGAGCAAACCCGCAT...GTCAGGTGAGTGGAAGGGGTGTTGTATATTGTGTTGATGACGTACGTTATTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp TTGAGGCTTATTGATTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAGTAGTCCGGAGTAGTTaGGTCAGGGCTCAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LRLIDSLDHNRLDSLSFLVVRSS*VRAQGW
Trigger: CCACCCCTGAGCCCTGACCCAACTACTCCGGACTAC...TAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAATCAATAAGCCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
CDS-3UTR CCA 90 bp AGAAAACAAAGCAATATTCGTAAAGCTAGGCAAGCGAGCGTAACATTGGAGAAAGTGCTGAAGGTGCAGTaGGCACTCCCAGATAGCTGC +
Preference number: 4 (lower is better)
Translates to: RKQSNIRKARQASVTLEKVLKVQ*ALPDSC
Trigger: GCAGCTATCTGGGAGTGCCCACTGCACCTTCAGCAC...TTTCTCCAATGTTACGCTCGCTTGCCTAGCTTTACGAATATTGCTTTGTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
CDS-3UTR CCA 90 bp AGAAAACAAAGCAATATTCGTAAAGCTAGGCAAGCGAGCGTAACATTGGAGAAAGCTCCTCCACACCATTaGTGCCCTCAGGAATGGCTG +
Preference number: 4 (lower is better)
Translates to: RKQSNIRKARQASVTLEKAPPHH*CPQEWL
Trigger: CAGCCATTCCTGAGGGCACCAATGGTGTGGAGGAGC...TTTCTCCAATGTTACGCTCGCTTGCCTAGCTTTACGAATATTGCTTTGTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
CDS-3UTR CCA 90 bp GGAAATAACGTACGTCATCAACACAATATACAACACCCCTTCCACTCACCTGACAGCATGATCTTGCCCTaGCAGATGACAACCAGAGGA +
Preference number: 4 (lower is better)
Translates to: GNNVRHQHNIQHPFHSPDSMILP*QMTTRG
Trigger: TCCTCTGGTTGTCATCTGCCAGGGCAAGATCATGCT...GTCAGGTGAGTGGAAGGGGTGTTGTATATTGTGTTGATGACGTACGTTATTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp AAACAAAGCAATATTCGTAAAGCTAGGCAAGCGAGCGTAACATTGGAGAAACATATCGTACATGCCCCTTaGGACGGCATGCAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: KQSNIRKARQASVTLEKHIVHAP*DGMQVC
Trigger: GCAGACCTGCATGCCGTCCCAAGGGGCATGTACGAT...ATGTTTCTCCAATGTTACGCTCGCTTGCCTAGCTTTACGAATATTGCTTTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
CDS-3UTR CCA 90 bp TTGAGGCTTATTGATTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTACCACGATGCGCTTGCTaGCTGAGCGAACCCCCTCAT +
Preference number: 4 (lower is better)
Translates to: LRLIDSLDHNRLDSLSFLPRCAC*LSEPPH
Trigger: ATGAGGGGGTTCGCTCAGCCAGCAAGCGCATCGTGG...TAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAATCAATAAGCCTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
CDS-3UTR CCA 90 bp CAGAGAGGTTGTGCAGAGATGAGTCAGACTCAGGGGCTGAGTAACAGCAGAGCAATCGGTGTACCATTTTaGCTTCAAAACAATCTCTTC +
Preference number: 4 (lower is better)
Translates to: QRGCAEMSQTQGLSNSRAIGVPF*LQNNLF
Trigger: GAAGAGATTGTTTTGAAGCCAAAATGGTACACCGAT...TGCTCTGCTGTTACTCAGCCCCTGAGTCTGACTCATCTCTGCACAACCTCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp GTTGTTCCCAGAGCAAGGAAATCTTGTGCAGAATCAAAGGTTCTGGTGGAATGGTTGCATGCATGTAAATaGGGGGAGGGGAGTCAAACA +
Preference number: 4 (lower is better)
Translates to: VVPRARKSCAESKVLVEWLHACK*GEGSQT
Trigger: TGTTTGACTCCCCTCCCCCCATTTACATGCATGCAA...CCATTCCACCAGAACCTTTGATTCTGCACAAGATTTCCTTGCTCTGGGAACAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp CTCCCTCTGCTCAAGACTGACTTTGGCTTTCCCAGTTCCCCACTTGACTTTCATAGCAGGTGGAAGAAATaGTTGGGTCTTGGCATTTTA +
Preference number: 4 (lower is better)
Translates to: LPLLKTDFGFPSSPLDFHSRWKK*LGLGIL
Trigger: TAAAATGCCAAGACCCAACCATTTCTTCCACCTGCT...ATGAAAGTCAAGTGGGGAACTGGGAAAGCCAAAGTCAGTCTTGAGCAGAGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp CCCATGAGGAAGACTGCATCATGTCACTTCCACTCACTTGGGGAGATTCTAGGAAATCAAAGGTTCTGGTaGAATGGTTCACTTCGGAAG +
Preference number: 4 (lower is better)
Translates to: PMRKTASCHFHSLGEILGNQRFW*NGSLRK
Trigger: CTTCCGAAGTGAACCATTCCACCAGAACCTTTGATT...TCCTAGAATCTCCCCAAGTGAGTGGAAGTGACATGATGCAGTCTTCCTCATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp TGTGCCAGGATCGAGAGAATCAAACACAAACTGCCTGTAAGAGAGGCCCTTCATCAGAATCAAAGGTTCTaGTGGAATGGTTCACTTCGG +
Preference number: 4 (lower is better)
Translates to: CARIERIKHKLPVREALHQNQRF*WNGSLR
Trigger: CCGAAGTGAACCATTCCACCAGAACCTTTGATTCTG...ATGAAGGGCCTCTCTTACAGGCAGTTTGTGTTTGATTCTCTCGATCCTGGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp ATAACGTACGTCATCAACACAATATACAACACCCCTTCCACTCACCTGACCCACGGATGGATTGCCATCTaGGTTCAGAGGCAATATGAG +
Preference number: 4 (lower is better)
Translates to: ITYVINTIYNTPSTHLTHGWIAI*VQRQYE
Trigger: CTCATATTGCCTCTGAACCCAGATGGCAATCCATCC...GTGGGTCAGGTGAGTGGAAGGGGTGTTGTATATTGTGTTGATGACGTACGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp GTTGTTCCCAGAGCAAGGAAATCTTGTGCAGAATCAAAGGTTCTGGTGGAATGGATCTGGGACTCAAGCTaGAGTTTTCCAGGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: VVPRARKSCAESKVLVEWIWDSS*SFPGEK
Trigger: TTTCTCCCCTGGAAAACTCCAGCTTGAGTCCCAGAT...CCATTCCACCAGAACCTTTGATTCTGCACAAGATTTCCTTGCTCTGGGAACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp AAACAAAGCAATATTCGTAAAGCTAGGCAAGCGAGCGTAACATTGGAGAAACATTCTGCACTTCCTGCTTaGCGCTGTCATTCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: KQSNIRKARQASVTLEKHSALPA*RCHSSG
Trigger: CCCACTGGAATGACAGCGTCAAGCAGGAAGTGCAGA...ATGTTTCTCCAATGTTACGCTCGCTTGCCTAGCTTTACGAATATTGCTTTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp TTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCTCTGCACTTCCTGCTTaGCGCTGTCATTCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: FFRSQPFGFAFLLKYRCTSALPA*RCHSSG
Trigger: CCCACTGGAATGACAGCGTCAAGCAGGAAGTGCAGA...GGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp TTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCGCTCTCCCAGGCAGGTaGAGATCTCATAGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: FFRSQPFGFAFLLKYRCTALPGR*RSHRAL
Trigger: CAGAGCTCTATGAGATCTTCACCTGCCTGGGAGAGC...GGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp TTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCTTTGGCTGGCAATGGTaGTGGCACGGAACACAGCCT +
Preference number: 4 (lower is better)
Translates to: FFRSQPFGFAFLLKYRCTFGWQW*WHGTQP
Trigger: AGGCTGTGTTCCGTGCCATCACCATTGCCAGCCAAA...GGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp TTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCTCCTGGCTTGTGAGATaGGGTCAGCTGCACTCTTGC +
Preference number: 4 (lower is better)
Translates to: FFRSQPFGFAFLLKYRCTSWLVR*GQLHSC
Trigger: GCAAGAGTGCAGCTGACCTCATCTCACAAGCCAGGA...GGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp TTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCATTTTGCCGAGGCTGGCAGTaGTGGGCTCACCAAAGACTA +
Preference number: 4 (lower is better)
Translates to: LDHNRLDSLSFLNIGVPFCRGWQ*WAHQRL
Trigger: TAGTCTTTGGTGAGCCCATCACTGCCAGCCTCGGCA...AAATGGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp CTGCTCTTCTCTTCAAAGCACTTAGTACACAGGGTTACAGGTGCTACCACTTGGGACTTGCTCCAAAACTaGATTTTCAGAAGCAGCATG +
Preference number: 4 (lower is better)
Translates to: LLFSSKHLVHRVTGATTWDLLQN*IFRSSM
Trigger: CATGCTGCTTCTGAAAATTCAGTTTTGGAGCAAGTC...CCAAGTGGTAGCACCTGTAACCCTGTGTACTAAGTGCTTTGAAGAGAAGAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp TGTGCCAGGATCGAGAGAATCAAACACAAACTGCCTGTAAGAGAGGCCCTTCATAACCCATTTTCAGGATaGCTACAATCCTTCCACTTC +
Preference number: 4 (lower is better)
Translates to: CARIERIKHKLPVREALHNPFSG*LQSFHF
Trigger: GAAGTGGAAGGATTGTAGTCATCCTGAAAATGGGTT...ATGAAGGGCCTCTCTTACAGGCAGTTTGTGTTTGATTCTCTCGATCCTGGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp TCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCACCAGCTCTTCTGGCCTaGTCAGTACATGGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: SLDHNRLDSLSFLNIGVPPALLA*SVHGLL
Trigger: CAGAAGGCCATGTACTGAGCAGGCCAGAAGAGCTGG...TGGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp TTGAGGCTTATTGATTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTACACCACGTGGGCCTGTaGTATGTTCTCAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LRLIDSLDHNRLDSLSFLHHVGL*YVLSCW
Trigger: CCAGCAGCTGAGAACATAGCACAGGCCCACGTGGTG...TAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAATCAATAAGCCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp ATAACGTACGTCATCAACACAATATACAACACCCCTTCCACTCACCTGACCCACAAAATGTGCTCCCTCTaGTCAAGACTGACTTTGGCT +
Preference number: 4 (lower is better)
Translates to: ITYVINTIYNTPSTHLTHKMCSL*SRLTLA
Trigger: AGCCAAAGTCAGTCTTGAGCAGAGGGAGCACATTTT...GTGGGTCAGGTGAGTGGAAGGGGTGTTGTATATTGTGTTGATGACGTACGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp ATTGATTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTCCCCTTGGGACGGCATaGAGGTCTGCCATAGACTGG +
Preference number: 4 (lower is better)
Translates to: IDSLDHNRLDSLSFLNIGPLGTA*RSAIDW
Trigger: CCAGTCTATGGCAGACCTGCATGCCGTCCCAAGGGG...ACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAATCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520473.1
CDS-3UTR CCA 90 bp CCCATGAGGAAGACTGCATCATGTCACTTCCACTCACTTGGGGAGATTCTAGGAAGAAGTCATCTACTGTaGTCATTCCCTTATATGGCA +
Preference number: 4 (lower is better)
Translates to: PMRKTASCHFHSLGEILGRSHLL*SFPYMA
Trigger: TGCCATATAAGGGAATGACCACAGTAGATGACTTCT...TCCTAGAATCTCCCCAAGTGAGTGGAAGTGACATGATGCAGTCTTCCTCATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp AGAAAACAAAGCAATATTCGTAAAGCTAGGCAAGCGAGCGTAACATTGGAGAAACGTCCATTTTCCCTGTaGCCACAGCCTTGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: RKQSNIRKARQASVTLEKRPFSL*PQPCPR
Trigger: TCTGGGACAAGGCTGTGGCCACAGGGAAAATGGACG...TTTCTCCAATGTTACGCTCGCTTGCCTAGCTTTACGAATATTGCTTTGTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
CDS-3UTR CCA 90 bp AAACAAAGCAATATTCGTAAAGCTAGGCAAGCGAGCGTAACATTGGAGAAACATCGTCCATTTTCCCTGTaGCCACAGCCTTGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: KQSNIRKARQASVTLEKHRPFSL*PQPCPR
Trigger: TCTGGGACAAGGCTGTGGCCACAGGGAAAATGGACG...ATGTTTCTCCAATGTTACGCTCGCTTGCCTAGCTTTACGAATATTGCTTTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
CDS-3UTR CCA 90 bp TCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCATCTGCCGCAGACTGGTaGTTCTTGGCAGAGACGATC +
Preference number: 4 (lower is better)
Translates to: SLDHNRLDSLSFLNIGVPSAADW*FLAETI
Trigger: GATCGTCTCTGCCAAGAACCACCAGTCTGCGGCAGA...TGGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp AGAAAACAAAGCAATATTCGTAAAGCTAGGCAAGCGAGCGTAACATTGGAGAAATACTCTGCCGCAGACTaGTGGTTCTTGGCAGAGACG +
Preference number: 4 (lower is better)
Translates to: RKQSNIRKARQASVTLEKYSAAD*WFLAET
Trigger: CGTCTCTGCCAAGAACCACCAGTCTGCGGCAGAGTA...TTTCTCCAATGTTACGCTCGCTTGCCTAGCTTTACGAATATTGCTTTGTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp TTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCATTTCACCTTTGGGGGTGGTaGTCAGGTCAAACACAGGCC +
Preference number: 4 (lower is better)
Translates to: LDHNRLDSLSFLNIGVPFHLWGW*SGQTQA
Trigger: GGCCTGTGTTTGACCTGACCACCACCCCCAAAGGTG...AAATGGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
CDS-3UTR CCA 90 bp CTGCTCTTCTCTTCAAAGCACTTAGTACACAGGGTTACAGGTGCTACCACTTGGAACTCCTATTTATCATaGATGTGCCAGGATCGAGAG +
Preference number: 4 (lower is better)
Translates to: LLFSSKHLVHRVTGATTWNSYLS*MCQDRE
Trigger: CTCTCGATCCTGGCACATCCATGATAAATAGGAGTT...CCAAGTGGTAGCACCTGTAACCCTGTGTACTAAGTGCTTTGAAGAGAAGAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp CTCCCTCTGCTCAAGACTGACTTTGGCTTTCCCAGTTCCCCACTTGACTTTCATGGAAATCCTGTTCCTTaGCTATCTCCAAATTCCTTT +
Preference number: 4 (lower is better)
Translates to: LPLLKTDFGFPSSPLDFHGNPVP*LSPNSF
Trigger: AAAGGAATTTGGAGATAGCCAAGGAACAGGATTTCC...ATGAAAGTCAAGTGGGGAACTGGGAAAGCCAAAGTCAGTCTTGAGCAGAGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp GTGGACGCTCAGAAGCGAGTTTATGTGTGTCTTTTCCTCTATCTGCTGGCTGTGTATATGCTTCAGATCTaGCAAACTCTCTCTGCACAT +
Preference number: 4 (lower is better)
Translates to: VDAQKRVYVCLFLYLLAVYMLQI*QTLSAH
Trigger: ATGTGCAGAGAGAGTTTGCCAGATCTGAAGCATATA...CACAGCCAGCAGATAGAGGAAAAGACACACATAAACTCGCTTCTGAGCGTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp AAACAAAGCAATATTCGTAAAGCTAGGCAAGCGAGCGTAACATTGGAGAAACATCCAGGGGAGAAAGCCTaGGAAGCTTGTGGCAAGGAA +
Preference number: 4 (lower is better)
Translates to: KQSNIRKARQASVTLEKHPGEKA*EACGKE
Trigger: TTCCTTGCCACAAGCTTCCCAGGCTTTCTCCCCTGG...ATGTTTCTCCAATGTTACGCTCGCTTGCCTAGCTTTACGAATATTGCTTTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp AGAAAACAAAGCAATATTCGTAAAGCTAGGCAAGCGAGCGTAACATTGGAGAAATGCGGGGATACAGGTTaGAGATCTTGGCAGCGTTTG +
Preference number: 4 (lower is better)
Translates to: RKQSNIRKARQASVTLEKCGDTG*RSWQRL
Trigger: CAAACGCTGCCAAGATCTTCAACCTGTATCCCCGCA...TTTCTCCAATGTTACGCTCGCTTGCCTAGCTTTACGAATATTGCTTTGTTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
CDS-3UTR TCA 90 bp ATAACGTACGTCATCAACACAATATACAACACCCCTTCCACTCACCTGACCCACAGGCTTGAGGCTTATTaGTTCTTTAGATCACAACCG +
Preference number: 4 (lower is better)
Translates to: ITYVINTIYNTPSTHLTHRLEAY*FFRSQP
Trigger: CGGTTGTGATCTAAAGAATCAATAAGCCTCAAGCCT...GTGGGTCAGGTGAGTGGAAGGGGTGTTGTATATTGTGTTGATGACGTACGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp GCGGCTATCTTCCATGGAAATAACGTACGTCATCAACACAATATACAACACCCCTCCCAGTTCCCCACTTaGCTTTCATATAAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: AAIFHGNNVRHQHNIQHPSQFPT*LSYKLR
Trigger: TCTCAGCTTATATGAAAGTCAAGTGGGGAACTGGGA...GGGGTGTTGTATATTGTGTTGATGACGTACGTTATTTCCATGGAAGATAGCCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp GAAGACTGCATCATGTCACTTCCACTCACTTGGGGAGATTCTAGGACTGAGACATTATTCTTAGTTCTCTaGAAGACCCCCACATCTTTG +
Preference number: 4 (lower is better)
Translates to: EDCIMSLPLTWGDSRTETLFLVL*KTPTSL
Trigger: CAAAGATGTGGGGGTCTTTCAGAGAACTAAGAATAA...TGTCTCAGTCCTAGAATCTCCCCAAGTGAGTGGAAGTGACATGATGCAGTCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp TTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCGAAAGAGAGGCTTCCTaGGCTCATGTTGTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: FFRSQPFGFAFLLKYRCTEREAS*AHVVPP
Trigger: GGGAGGAACAACATGAGCTCAGGAAGCCTCTCTTTC...GGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp TTGAGGCTTATTGATTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAGAGGGAACTTACAATaGATGCTGGCTGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: LRLIDSLDHNRLDSLSFLRGNLQ*MLAAQG
Trigger: GCCCTGGGCAGCCAGCATTCATTGTAAGTTCCCTCT...TAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAATCAATAAGCCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp TTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCTCCCCATTTCCAACATaGGGGTTTGCTCCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: FFRSQPFGFAFLLKYRCTSPFPT*GFAPGQ
Trigger: TTGCCCAGGAGCAAACCCGCATGTTGGAAATGGGGA...GGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp ATAACGTACGTCATCAACACAATATACAACACCCCTTCCACTCACCTGACCCACTCACCCCAAATAACCTaGGTCCCTTTTGTTCATTTC +
Preference number: 4 (lower is better)
Translates to: ITYVINTIYNTPSTHLTHSPQIT*VPFVHF
Trigger: GAAATGAACAAAAGGGACGCAGGTTATTTGGGGTGA...GTGGGTCAGGTGAGTGGAAGGGGTGTTGTATATTGTGTTGATGACGTACGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp TTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCATTTGGAACTTACAATGAATaGTGGCTGCCCAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: LDHNRLDSLSFLNIGVPFGTYNE*WLPRAA
Trigger: GGCTGCCCTGGGCAGCCAGCATTCATTGTAAGTTCC...AAATGGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp GCAAACACTGGCACAATCAAGCAGGTGGAAGAAATGGTTGGGTCTTGGCATTTTGGTCATTCCCTTATATaGCATCTGGAAGTGAGTATG +
Preference number: 4 (lower is better)
Translates to: ANTGTIKQVEEMVGSWHFGHSLI*HLEVSM
Trigger: CATACTCACTTCCAGATGCCATATAAGGGAATGACC...AAAATGCCAAGACCCAACCATTTCTTCCACCTGCTTGATTGTGCCAGTGTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp ATTGATTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTATCGTACATGCCCCTTaGGACGGCATGCAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: IDSLDHNRLDSLSFLNIGIVHAP*DGMQVC
Trigger: GCAGACCTGCATGCCGTCCCAAGGGGCATGTACGAT...ACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAATCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
CDS-3UTR CCA 90 bp TTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCAAGATTCCTCACAGGTaGGTTCGGCCGAGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: FFRSQPFGFAFLLKYRCTKIPHR*VRPSRR
Trigger: TCTCCTACTCGGCCGAACCCACCTGTGAGGAATCTT...GGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
CDS-3UTR CCA 90 bp ATTGATTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTAGCGTCTTTAAGCTGTaGGTGCCCTCACCACGTGGG +
Preference number: 4 (lower is better)
Translates to: IDSLDHNRLDSLSFLNIGSVFKL*VPSPRG
Trigger: CCCACGTGGTGAGGGCACCCACAGCTTAAAGACGCT...ACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAATCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp TTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCGGATTCCCCAGAGCATaGAAGTCTGATCCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: FFRSQPFGFAFLLKYRCTGFPRA*KSDPRL
Trigger: CAACCTGGGATCAGACTTCCATGCTCTGGGGAATCC...GGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp GAAGACTGCATCATGTCACTTCCACTCACTTGGGGAGATTCTAGGACTGAGACAGGAAATCCTGTTCCTTaGCTATCTCCAAATTCCTTT +
Preference number: 4 (lower is better)
Translates to: EDCIMSLPLTWGDSRTETGNPVP*LSPNSF
Trigger: AAAGGAATTTGGAGATAGCCAAGGAACAGGATTTCC...TGTCTCAGTCCTAGAATCTCCCCAAGTGAGTGGAAGTGACATGATGCAGTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp TCCCTCTGCTCAAGACTGACTTTGGCTTTCCCAGTTCCCCACTTGACTTTCATATATATGCTTCAGATCTaGCAAACTCTCTCTGCACAT +
Preference number: 4 (lower is better)
Translates to: SLCSRLTLAFPVPHLTFIYMLQI*QTLSAH
Trigger: ATGTGCAGAGAGAGTTTGCCAGATCTGAAGCATATA...TATGAAAGTCAAGTGGGGAACTGGGAAAGCCAAAGTCAGTCTTGAGCAGAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp TCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCATCTGCTGGCTGTGGCTaGTACTGCAACCTATCCCAA +
Preference number: 4 (lower is better)
Translates to: SLDHNRLDSLSFLNIGVPSAGCG*YCNLSQ
Trigger: TTGGGATAGGTTGCAGTACCAGCCACAGCCAGCAGA...TGGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp TTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCATTTCCAGGGGAGAAAGCCTaGGAAGCTTGTGGCAAGGAA +
Preference number: 4 (lower is better)
Translates to: LDHNRLDSLSFLNIGVPFPGEKA*EACGKE
Trigger: TTCCTTGCCACAAGCTTCCCAGGCTTTCTCCCCTGG...AAATGGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp AAACAAAGCAATATTCGTAAAGCTAGGCAAGCGAGCGTAACATTGGAGAAACATAGGTCTGCCATAGACTaGTGGTTCTTGGCAGAGACG +
Preference number: 4 (lower is better)
Translates to: KQSNIRKARQASVTLEKHRSAID*WFLAET
Trigger: CGTCTCTGCCAAGAACCACCAGTCTATGGCAGACCT...ATGTTTCTCCAATGTTACGCTCGCTTGCCTAGCTTTACGAATATTGCTTTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520473.1
CDS-3UTR TCA 90 bp TCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCACCTCAGGAATGGCTGTaGAGTTGTCCTTCCCAATTG +
Preference number: 4 (lower is better)
Translates to: SLDHNRLDSLSFLNIGVPPQEWL*SCPSQL
Trigger: CAATTGGGAAGGACAACTTCACAGCCATTCCTGAGG...TGGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
CDS-3UTR TCA 90 bp ATTGATTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTCATCTGGATCCCAGATaGCGAGGTCGCTGTCAGAAC +
Preference number: 4 (lower is better)
Translates to: IDSLDHNRLDSLSFLNIGHLDPR*RGRCQN
Trigger: GTTCTGACAGCGACCTCGTCATCTGGGATCCAGATG...ACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAATCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
CDS-3UTR TCA 90 bp ATAACGTACGTCATCAACACAATATACAACACCCCTTCCACTCACCTGACCCACTTATTCTTAGTTCTCTaGAAGACCCCCACATCTTTG +
Preference number: 4 (lower is better)
Translates to: ITYVINTIYNTPSTHLTHLFLVL*KTPTSL
Trigger: CAAAGATGTGGGGGTCTTTCAGAGAACTAAGAATAA...GTGGGTCAGGTGAGTGGAAGGGGTGTTGTATATTGTGTTGATGACGTACGTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp GCGGCTATCTTCCATGGAAATAACGTACGTCATCAACACAATATACAACACCCCAACCCATTTTCAGGATaGCTACAATCCTTCCACTTC +
Preference number: 4 (lower is better)
Translates to: AAIFHGNNVRHQHNIQHPNPFSG*LQSFHF
Trigger: GAAGTGGAAGGATTGTAGTCATCCTGAAAATGGGTT...GGGGTGTTGTATATTGTGTTGATGACGTACGTTATTTCCATGGAAGATAGCCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp TCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCATCTTGGCAGCGTTTGTaGTTGTCACAGCCACGAACT +
Preference number: 4 (lower is better)
Translates to: SLDHNRLDSLSFLNIGVPSWQRL*LSQPRT
Trigger: AGTTCGTGGCTGTGACAAGCACAAACGCTGCCAAGA...TGGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
CDS-3UTR GCA 90 bp AGAAAACAAAGCAATATTCGTAAAGCTAGGCAAGCGAGCGTAACATTGGAGAAACCCCTTGTCATAAGATaGAGCACTACACACGCTCTC +
Preference number: 4 (lower is better)
Translates to: RKQSNIRKARQASVTLEKPLVIR*STTHAL
Trigger: GAGAGCGTGTGTAGTGCTGCATCTTATGACAAGGGG...TTTCTCCAATGTTACGCTCGCTTGCCTAGCTTTACGAATATTGCTTTGTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp TTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCCCCCTTGTCATAAGATaGAGCACTACACACGCTCTC +
Preference number: 4 (lower is better)
Translates to: FFRSQPFGFAFLLKYRCTPLVIR*STTHAL
Trigger: GAGAGCGTGTGTAGTGCTGCATCTTATGACAAGGGG...GGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp TGTGCCAGGATCGAGAGAATCAAACACAAACTGCCTGTAAGAGAGGCCCTTCATTATTTATCATGGATGTaGCAGGATCGAGAGAATCAA +
Preference number: 4 (lower is better)
Translates to: CARIERIKHKLPVREALHYLSWM*QDRENQ
Trigger: TTGATTCTCTCGATCCTGGCACATCCATGATAAATA...ATGAAGGGCCTCTCTTACAGGCAGTTTGTGTTTGATTCTCTCGATCCTGGCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp TCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCACAGGTCCACAAAATGTaGTCCCTCTGCTCAAGACTG +
Preference number: 4 (lower is better)
Translates to: SLDHNRLDSLSFLNIGVPQVHKM*SLCSRL
Trigger: CAGTCTTGAGCAGAGGGAGCACATTTTGTGGACCTG...TGGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp GAAGACTGCATCATGTCACTTCCACTCACTTGGGGAGATTCTAGGACTGAGACACAACTTATTCAAACCTaGAGTCAGAGACAATGGTTT +
Preference number: 4 (lower is better)
Translates to: EDCIMSLPLTWGDSRTETQLIQT*SQRQWF
Trigger: AAACCATTGTCTCTGACTGCAGGTTTGAATAAGTTG...TGTCTCAGTCCTAGAATCTCCCCAAGTGAGTGGAAGTGACATGATGCAGTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp AGAAAACAAAGCAATATTCGTAAAGCTAGGCAAGCGAGCGTAACATTGGAGAAAGGCTGTGGCTGGTACTaGAACCTATCCCAAAGTAAC +
Preference number: 4 (lower is better)
Translates to: RKQSNIRKARQASVTLEKGCGWY*NLSQSN
Trigger: GTTACTTTGGGATAGGTTGCAGTACCAGCCACAGCC...TTTCTCCAATGTTACGCTCGCTTGCCTAGCTTTACGAATATTGCTTTGTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp GTTGTTCCCAGAGCAAGGAAATCTTGTGCAGAATCAAAGGTTCTGGTGGAATGGAGCAAGGAAATCTTGTaGAGAATCAAAGGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: VVPRARKSCAESKVLVEWSKEIL*RIKGSG
Trigger: ACCAGAACCTTTGATTCTGCACAAGATTTCCTTGCT...CCATTCCACCAGAACCTTTGATTCTGCACAAGATTTCCTTGCTCTGGGAACAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp AAACAAAGCAATATTCGTAAAGCTAGGCAAGCGAGCGTAACATTGGAGAAACATAAGGAAGTTGGGAATTaGCCACCCTACTGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: KQSNIRKARQASVTLEKHKEVGN*PPYWKG
Trigger: CCCTTTCCAGTAGGGTGGGCAATTCCCAACTTCCTT...ATGTTTCTCCAATGTTACGCTCGCTTGCCTAGCTTTACGAATATTGCTTTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp AGAAAACAAAGCAATATTCGTAAAGCTAGGCAAGCGAGCGTAACATTGGAGAAATTCACGTTCCAGAGCTaGCTCACAGCTAGCACAGAT +
Preference number: 4 (lower is better)
Translates to: RKQSNIRKARQASVTLEKFTFQS*LTASTD
Trigger: ATCTGTGCTAGCTGTGAGGCAGCTCTGGAACGTGAA...TTTCTCCAATGTTACGCTCGCTTGCCTAGCTTTACGAATATTGCTTTGTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp TTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCTTCCCAATTGCTTTCTaGGCAGTGCTGAAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: FFRSQPFGFAFLLKYRCTFPIAF*AVLKVQ
Trigger: CTGCACCTTCAGCACTGCCCAGAAAGCAATTGGGAA...GGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
CDS-3UTR CCA 90 bp TTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCGATCTTCACAGCATCTaGATCCCAGATGACGAGGTC +
Preference number: 4 (lower is better)
Translates to: FFRSQPFGFAFLLKYRCTDLHSI*IPDDEV
Trigger: GACCTCGTCATCTGGGATCCAGATGCTGTGAAGATC...GGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
CDS-3UTR CCA 90 bp TCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCAGATCTTCACAGCATCTaGATCCCAGATGACGAGGTC +
Preference number: 4 (lower is better)
Translates to: SLDHNRLDSLSFLNIGVPDLHSI*IPDDEV
Trigger: GACCTCGTCATCTGGGATCCAGATGCTGTGAAGATC...TGGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
CDS-3UTR CCA 90 bp ATTGATTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTTCTGCCGCAGACTGGTaGTTCTTGGCAGAGACGATC +
Preference number: 4 (lower is better)
Translates to: IDSLDHNRLDSLSFLNIGSAADW*FLAETI
Trigger: GATCGTCTCTGCCAAGAACCACCAGTCTGCGGCAGA...ACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAATCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp GGAAATAACGTACGTCATCAACACAATATACAACACCCCTTCCACTCACCTGACAGCAGGTGGAAGAAATaGTTGGGTCTTGGCATTTTA +
Preference number: 4 (lower is better)
Translates to: GNNVRHQHNIQHPFHSPDSRWKK*LGLGIL
Trigger: TAAAATGCCAAGACCCAACCATTTCTTCCACCTGCT...GTCAGGTGAGTGGAAGGGGTGTTGTATATTGTGTTGATGACGTACGTTATTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp TCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCATCTATCTGCTGGCTGTaGCTGGTACTGCAACCTATC +
Preference number: 4 (lower is better)
Translates to: SLDHNRLDSLSFLNIGVPSICWL*LVLQPI
Trigger: GATAGGTTGCAGTACCAGCCACAGCCAGCAGATAGA...TGGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp TTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCATTTCAGAGAGAACCGGGATaGATTGCCATCTGGGTTCAG +
Preference number: 4 (lower is better)
Translates to: LDHNRLDSLSFLNIGVPFQREPG*IAIWVQ
Trigger: CTGAACCCAGATGGCAATCCATCCCGGTTCTCTCTG...AAATGGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp AAACAAAGCAATATTCGTAAAGCTAGGCAAGCGAGCGTAACATTGGAGAAACATCCCATAAGACAAGAATaGCTGATCTGCGACTCCTCC +
Preference number: 4 (lower is better)
Translates to: KQSNIRKARQASVTLEKHPIRQE*LICDSS
Trigger: GGAGGAGTCGCAGATCAGCCATTCTTGTCTTATGGG...ATGTTTCTCCAATGTTACGCTCGCTTGCCTAGCTTTACGAATATTGCTTTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398514.7
CDS-3UTR CCA 90 bp TCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCATCTGCCATAGACTGGTaGTTCTTGGCAGAGACGATC +
Preference number: 4 (lower is better)
Translates to: SLDHNRLDSLSFLNIGVPSAIDW*FLAETI
Trigger: GATCGTCTCTGCCAAGAACCACCAGTCTATGGCAGA...TGGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520473.1
CDS-3UTR TCA 90 bp TTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCTATGGCATCTGGAAGTaGGTATGGACATCGATGCCT +
Preference number: 4 (lower is better)
Translates to: FFRSQPFGFAFLLKYRCTYGIWK*VWTSMP
Trigger: AGGCATCGATGTCCATACTCACTTCCAGATGCCATA...GGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp AAACAAAGCAATATTCGTAAAGCTAGGCAAGCGAGCGTAACATTGGAGAAACATACTAAGAAAGAGGCCTaGGCAAACACTGGCACAATC +
Preference number: 4 (lower is better)
Translates to: KQSNIRKARQASVTLEKHTKKEA*ANTGTI
Trigger: GATTGTGCCAGTGTTTGCTCAGGCCTCTTTCTTAGT...ATGTTTCTCCAATGTTACGCTCGCTTGCCTAGCTTTACGAATATTGCTTTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp GCAAACACTGGCACAATCAAGCAGGTGGAAGAAATGGTTGGGTCTTGGCATTTTTCTACTACGGGTAACTaGTTTAACAATTTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: ANTGTIKQVEEMVGSWHFSTTGN*FNNFPN
Trigger: GTTTGGGAAATTGTTAAATCAGTTACCCGTAGTAGA...AAAATGCCAAGACCCAACCATTTCTTCCACCTGCTTGATTGTGCCAGTGTTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp TTGAGGCTTATTGATTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAGGTTCTGCACTTCCTaGTTGACGCTGTCATTCCAG +
Preference number: 4 (lower is better)
Translates to: LRLIDSLDHNRLDSLSFLRFCTS*LTLSFQ
Trigger: CTGGAATGACAGCGTCAAGCAGGAAGTGCAGAACCT...TAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAATCAATAAGCCTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp AAACAAAGCAATATTCGTAAAGCTAGGCAAGCGAGCGTAACATTGGAGAAACATGTTGTCCTTCCCAATTaGTTTCTGGGCAGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: KQSNIRKARQASVTLEKHVVLPN*FLGSAE
Trigger: TTCAGCACTGCCCAGAAAGCAATTGGGAAGGACAAC...ATGTTTCTCCAATGTTACGCTCGCTTGCCTAGCTTTACGAATATTGCTTTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
CDS-3UTR GCA 90 bp TTGAGGCTTATTGATTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAACACAGGGTTACAGGTaGTACCACTTGGATTCCCCA +
Preference number: 4 (lower is better)
Translates to: LRLIDSLDHNRLDSLSFLTQGYR*YHLDSP
Trigger: TGGGGAATCCAAGTGGTAGCACCTGTAACCCTGTGT...TAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAATCAATAAGCCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp TTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCATTTCAGTACATGGCCTTCTaGGCCAGTTATCCCCATTTC +
Preference number: 4 (lower is better)
Translates to: LDHNRLDSLSFLNIGVPFQYMAF*ASYPHF
Trigger: GAAATGGGGATAACTGGCCCAGAAGGCCATGTACTG...AAATGGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp TTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCATTTCAGACTGGTGGTTCTTaGCAGAGACGATCTTCACAG +
Preference number: 4 (lower is better)
Translates to: LDHNRLDSLSFLNIGVPFQTGGS*QRRSSQ
Trigger: CTGTGAAGATCGTCTCTGCCAAGAACCACCAGTCTG...AAATGGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp GCAAACACTGGCACAATCAAGCAGGTGGAAGAAATGGTTGGGTCTTGGCATTTTATCGGTGTACCATTTTaGCTTCAAAACAATCTCTTC +
Preference number: 4 (lower is better)
Translates to: ANTGTIKQVEEMVGSWHFIGVPF*LQNNLF
Trigger: GAAGAGATTGTTTTGAAGCCAAAATGGTACACCGAT...AAAATGCCAAGACCCAACCATTTCTTCCACCTGCTTGATTGTGCCAGTGTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp AAACAAAGCAATATTCGTAAAGCTAGGCAAGCGAGCGTAACATTGGAGAAACATGCTAAAATCCTGACTTaGGATGCCAGAAGCATGCCA +
Preference number: 4 (lower is better)
Translates to: KQSNIRKARQASVTLEKHAKILT*DARSMP
Trigger: TGGCATGCTTCTGGCATCCCAAGTCAGGATTTTAGC...ATGTTTCTCCAATGTTACGCTCGCTTGCCTAGCTTTACGAATATTGCTTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp TTGAGGCTTATTGATTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTATTTGCTCCTGGGCAATaGTATCCCCATTCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: LRLIDSLDHNRLDSLSFLFAPGQ*YPHSQH
Trigger: ATGCTGAGAATGGGGATATCATTGCCCAGGAGCAAA...TAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAATCAATAAGCCTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp TTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCATTTTTTTGTTCATTTCCCTaGCGTCCCAGCTTGTCTGTC +
Preference number: 4 (lower is better)
Translates to: LDHNRLDSLSFLNIGVPFFCSFP*RPSLSV
Trigger: GACAGACAAGCTGGGACGTCAGGGAAATGAACAAAA...AAATGGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAA
41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp AGAAAACAAAGCAATATTCGTAAAGCTAGGCAAGCGAGCGTAACATTGGAGAAATCATTCTGCCTCATCTaGGCTAAAATCCTGACTTGG +
Preference number: 4 (lower is better)
Translates to: RKQSNIRKARQASVTLEKSFCLI*AKILTW
Trigger: CCAAGTCAGGATTTTAGCTCAGATGAGGCAGAATGA...TTTCTCCAATGTTACGCTCGCTTGCCTAGCTTTACGAATATTGCTTTGTTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp TTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCATTTCTTCCTACACTTGCATaGGGTGCCAGTGAATTCGAA +
Preference number: 4 (lower is better)
Translates to: LDHNRLDSLSFLNIGVPFLPTLA*GASEFE
Trigger: TTCGAATTCACTGGCACCTCATGCAAGTGTAGGAAG...AAATGGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp ATTGATTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTTCTTGGCAGCGTTTGTaGTTGTCACAGCCACGAACT +
Preference number: 4 (lower is better)
Translates to: IDSLDHNRLDSLSFLNIGSWQRL*LSQPRT
Trigger: AGTTCGTGGCTGTGACAAGCACAAACGCTGCCAAGA...ACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAATCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
CDS-3UTR GCA 90 bp TTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCTGCTATGTTCTCAGCTaGTGGCTTTTAAGAGCACCA +
Preference number: 4 (lower is better)
Translates to: FFRSQPFGFAFLLKYRCTCYVLS*WLLRAP
Trigger: TGGTGCTCTTAAAAGCCAGCAGCTGAGAACATAGCA...GGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp AGAAAACAAAGCAATATTCGTAAAGCTAGGCAAGCGAGCGTAACATTGGAGAAACTAATTTCTTTCAGGTaGCCCATGAGGAAGACTGCA +
Preference number: 4 (lower is better)
Translates to: RKQSNIRKARQASVTLEKLISFR*PMRKTA
Trigger: TGCAGTCTTCCTCATGGGGCACCTGAAAGAAATTAG...TTTCTCCAATGTTACGCTCGCTTGCCTAGCTTTACGAATATTGCTTTGTTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp ATTGATTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTTTCACGTTCCAGAGCTaGCTCACAGCTAGCACAGAT +
Preference number: 4 (lower is better)
Translates to: IDSLDHNRLDSLSFLNIGFTFQS*LTASTD
Trigger: ATCTGTGCTAGCTGTGAGGCAGCTCTGGAACGTGAA...ACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAATCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp TTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCGCACAATCAAGCAGGTaGAAGAAATGGTTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: FFRSQPFGFAFLLKYRCTAQSSR*KKWLGL
Trigger: AAGACCCAACCATTTCTTCCACCTGCTTGATTGTGC...GGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp TTGAGGCTTATTGATTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAAGGTTCTGGTGGAATaGTTCACTTCGGAAGTCCCA +
Preference number: 4 (lower is better)
Translates to: LRLIDSLDHNRLDSLSFLKVLVE*FTSEVP
Trigger: TGGGACTTCCGAAGTGAACCATTCCACCAGAACCTT...TAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAATCAATAAGCCTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp TTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCATTTGGTGTCAGCCCTTTGTaGAAACATGACACTCTCAGT +
Preference number: 4 (lower is better)
Translates to: LDHNRLDSLSFLNIGVPFGVSPL*KHDTLS
Trigger: ACTGAGAGTGTCATGTTTCCACAAAGGGCTGACACC...AAATGGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp ATTGATTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTTTTTGTTCATTTCCCTaGCGTCCCAGCTTGTCTGTC +
Preference number: 4 (lower is better)
Translates to: IDSLDHNRLDSLSFLNIGFCSFP*RPSLSV
Trigger: GACAGACAAGCTGGGACGTCAGGGAAATGAACAAAA...ACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAATCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp AAACAAAGCAATATTCGTAAAGCTAGGCAAGCGAGCGTAACATTGGAGAAACATGTTAGTAATGGTAAGTaGAGAAAGAGAGGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: KQSNIRKARQASVTLEKHVSNGK*RKRGFL
Trigger: CAGGAAGCCTCTCTTTCTTCACTTACCATTACTAAC...ATGTTTCTCCAATGTTACGCTCGCTTGCCTAGCTTTACGAATATTGCTTTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp ATTGATTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTTGTCCTTCCCAATTaGTTTCTGGGCAGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: IDSLDHNRLDSLSFLNIGVVLPN*FLGSAE
Trigger: TTCAGCACTGCCCAGAAAGCAATTGGGAAGGACAAC...ACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAATCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
CDS-3UTR CCA 90 bp TTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCATTTGCACAATCAAGCAGGTaGAAGAAATGGTTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: LDHNRLDSLSFLNIGVPFAQSSR*KKWLGL
Trigger: AAGACCCAACCATTTCTTCCACCTGCTTGATTGTGC...AAATGGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp AAACAAAGCAATATTCGTAAAGCTAGGCAAGCGAGCGTAACATTGGAGAAACATAACTCCTATTTATCATaGATGTGCCAGGATCGAGAG +
Preference number: 4 (lower is better)
Translates to: KQSNIRKARQASVTLEKHNSYLS*MCQDRE
Trigger: CTCTCGATCCTGGCACATCCATGATAAATAGGAGTT...ATGTTTCTCCAATGTTACGCTCGCTTGCCTAGCTTTACGAATATTGCTTTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp TCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCATTTGGAATGGAAAGGTaGAACCAGGTCCACAAAATG +
Preference number: 4 (lower is better)
Translates to: SLDHNRLDSLSFLNIGVPFGMER*NQVHKM
Trigger: CATTTTGTGGACCTGGTTCCACCTTTCCATTCCAAA...TGGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
3UTR CAA 72 bp GGCTTGAGGCTTATTGATTCTTTAGATCACAACCGTTaGGATTCGCTTTCCTTCTTAAATATCGGTGTACCA +
Preference number: 4 (lower is better)
Translates to: GLRLIDSLDHNR*DSLSFLNIGVP
Trigger: TGGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAATCAATAAGCCTCAAGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
CDS-3UTR TCA 90 bp TTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCATTTAGGCTTGAGGCTTATTaGTTCTTTAGATCACAACCG +
Preference number: 4 (lower is better)
Translates to: LDHNRLDSLSFLNIGVPFRLEAY*FFRSQP
Trigger: CGGTTGTGATCTAAAGAATCAATAAGCCTCAAGCCT...AAATGGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
CDS-3UTR TCA 90 bp ATTGATTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTCCCTTTGTGGAAACATaGCACTCTCAGTATAGACAG +
Preference number: 4 (lower is better)
Translates to: IDSLDHNRLDSLSFLNIGPFVET*HSQYRQ
Trigger: CTGTCTATACTGAGAGTGTCATGTTTCCACAAAGGG...ACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAATCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR TCA 90 bp TCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCACTCTCTTATCCCTATTaGTTTTCCTCTTTGCATCTG +
Preference number: 4 (lower is better)
Translates to: SLDHNRLDSLSFLNIGVPLSYPY*FSSLHL
Trigger: CAGATGCAAAGAGGAAAATCAATAGGGATAAGAGAG...TGGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398514.7
CDS-3UTR GCA 90 bp TCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCATCTTTGAGGAAGGCTTaGTTAACTCAGAGATGTGAT +
Preference number: 4 (lower is better)
Translates to: SLDHNRLDSLSFLNIGVPSLRKA*LTQRCD
Trigger: ATCACATCTCTGAGTTAAGCAAGCCTTCCTCAAAGA...TGGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
CDS-3UTR GCA 90 bp TTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCTCTTTGAGGAAGGCTTaGTTAACTCAGAGATGTGAT +
Preference number: 4 (lower is better)
Translates to: FFRSQPFGFAFLLKYRCTSLRKA*LTQRCD
Trigger: ATCACATCTCTGAGTTAAGCAAGCCTTCCTCAAAGA...GGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
CDS-3UTR GCA 90 bp TTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCATTTTCACCCCAAATAACCTaGGTCCCTTTTGTTCATTTC +
Preference number: 4 (lower is better)
Translates to: LDHNRLDSLSFLNIGVPFSPQIT*VPFVHF
Trigger: GAAATGAACAAAAGGGACGCAGGTTATTTGGGGTGA...AAATGGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp AAACAAAGCAATATTCGTAAAGCTAGGCAAGCGAGCGTAACATTGGAGAAACATAGAAGTCATCTACTGTaGTCATTCCCTTATATGGCA +
Preference number: 4 (lower is better)
Translates to: KQSNIRKARQASVTLEKHRSHLL*SFPYMA
Trigger: TGCCATATAAGGGAATGACCACAGTAGATGACTTCT...ATGTTTCTCCAATGTTACGCTCGCTTGCCTAGCTTTACGAATATTGCTTTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp TTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCTATTTATCATGGATGTaGCAGGATCGAGAGAATCAA +
Preference number: 4 (lower is better)
Translates to: FFRSQPFGFAFLLKYRCTYLSWM*QDRENQ
Trigger: TTGATTCTCTCGATCCTGGCACATCCATGATAAATA...GGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp TCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCAATCGGTGTACCATTTTaGCTTCAAAACAATCTCTTC +
Preference number: 4 (lower is better)
Translates to: SLDHNRLDSLSFLNIGVPIGVPF*LQNNLF
Trigger: GAAGAGATTGTTTTGAAGCCAAAATGGTACACCGAT...TGGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
CDS-3UTR CCA 90 bp ATTGATTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTTTTGGAATGGAAAGGTaGAACCAGGTCCACAAAATG +
Preference number: 4 (lower is better)
Translates to: IDSLDHNRLDSLSFLNIGFGMER*NQVHKM
Trigger: CATTTTGTGGACCTGGTTCCACCTTTCCATTCCAAA...ACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAATCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CCA 90 bp TTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCAGGGATTTCTATGCTTaGAGAGTTAGTAATGGTAAG +
Preference number: 4 (lower is better)
Translates to: FFRSQPFGFAFLLKYRCTRDFYA*RVSNGK
Trigger: CTTACCATTACTAACTCTCCAAGCATAGAAATCCCT...GGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR GCA 90 bp TTGAGGCTTATTGATTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTACAACTTATTCAAACCTaGAGTCAGAGACAATGGTTT +
Preference number: 4 (lower is better)
Translates to: LRLIDSLDHNRLDSLSFLQLIQT*SQRQWF
Trigger: AAACCATTGTCTCTGACTGCAGGTTTGAATAAGTTG...TAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAATCAATAAGCCTCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS TCA 90 bp CGCCCGCGCCTTCCTCAGCGCACAGCGCCCCGAGATCAGGTGGAGTaGATGGTGCGCTGGCCGCGCCGCCGCCTCCGCCCGCCTCCGCCC +
Preference number: 5 (lower is better)
Translates to: RPRLPQRTAPRDQVE*MVRWPRRRLRPPPP
Trigger: GGGCGGAGGCGGGCGGAGGCGGCGGCGCGGCCAGCGCACCATTCACTCCACCTGATCTCGGGGCGCTGTGCGCTGAGGAAGGCGCGGGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398514.7
ENST00000512722.1
CDS TCA 90 bp GGCAGCGTGCGCCGAGCCACAGTGACTGTGGCGGGAGGAGGCGCCTaGGCCTTCGCGCCAGAGGCGGCAGTGCTGCTCCGATTCCTGCTT +
Preference number: 5 (lower is better)
Translates to: GSVRRATVTVAGGGA*AFAPEAAVLLRFLL
Trigger: AAGCAGGAATCGGAGCAGCACTGCCGCCTCTGGCGCGAAGGCTCAGGCGCCTCCTCCCGCCACAGTCACTGTGGCTCGGCGCACGCTGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343218.10
CDS GCA 90 bp GCGCCTGAGCCTTCGCGCCAGAGGCGGCAGTGCTGCTCCGATTCCTaGTTGTCCCTAGCGAGCCAGCGAGCCACACAGCCAGCTAGCGCG +
Preference number: 5 (lower is better)
Translates to: APEPSRQRRQCCSDS*LSLASQRATQPASA
Trigger: CGCGCTAGCTGGCTGTGTGGCTCGCTGGCTCGCTAGGGACAAGCAGGAATCGGAGCAGCACTGCCGCCTCTGGCGCGAAGGCTCAGGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343218.10
CDS GCA 90 bp TGGCGGGAGGAGGCGCCTGAGCCTTCGCGCCAGAGGCGGCAGTGCTaGTCCGATTCCTGCTTGTCCCTAGCGAGCCAGCGAGCCACACAG +
Preference number: 5 (lower is better)
Translates to: WREEAPEPSRQRRQC*SDSCLSLASQRATQ
Trigger: CTGTGTGGCTCGCTGGCTCGCTAGGGACAAGCAGGAATCGGAGCAGCACTGCCGCCTCTGGCGCGAAGGCTCAGGCGCCTCCTCCCGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343218.10
CDS GCA 90 bp CTGTGGCGGGAGGAGGCGCCTGAGCCTTCGCGCCAGAGGCGGCAGTaGTGCTCCGATTCCTGCTTGTCCCTAGCGAGCCAGCGAGCCACA +
Preference number: 5 (lower is better)
Translates to: LWREEAPEPSRQRRQ*CSDSCLSLASQRAT
Trigger: TGTGGCTCGCTGGCTCGCTAGGGACAAGCAGGAATCGGAGCAGCACTGCCGCCTCTGGCGCGAAGGCTCAGGCGCCTCCTCCCGCCACAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343218.10
CDS GCA 90 bp CCTCGGTCGCTGCCCTGGCCGCTCCGAGGAGTCTTCGCGCCCCGCTaGCCCACGCTGAGGGCATCGAAATCCAGCGTCTTGCTCTCGAAG +
Preference number: 5 (lower is better)
Translates to: PRSLPWPLRGVFAPR*PTLRASKSSVLLSK
Trigger: CTTCGAGAGCAAGACGCTGGATTTCGATGCCCTCAGCGTGGGGCAGCGGGGCGCGAAGACTCCTCGGAGCGGCCAGGGCAGCGACCGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343218.10
CDS CCA 90 bp TCCGCGGGATGTTCTTCTTGCCTTGGTAGGACATGGTGGCGGTGGTaGCTGCAGCGGCTGGCTCCCTCCCTCCTTCTTCTGCTCCGGCTC +
Preference number: 5 (lower is better)
Translates to: SAGCSSCLGRTWWRW*LQRLAPSLLLLLRL
Trigger: GAGCCGGAGCAGAAGAAGGAGGGAGGGAGCCAGCCGCTGCAGCCACCACCGCCACCATGTCCTACCAAGGCAAGAAGAACATCCCGCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398514.7
ENST00000512722.1
ENST00000519672.1
CDS-3UTR CAA 90 bp AACGGGCTGCAGGGTATGAAGCGGCCAGCCCCCTGGGTCACGTGCAGGTTGCCACATCGTACATGCCCCTaGGGACGGCATGCAGGTCTG +
Preference number: 5 (lower is better)
Translates to: NGLQGMKRPAPWVTCRLPHRTCP*GRHAGL
Trigger: CAGACCTGCATGCCGTCCCAAGGGGCATGTACGATG...TGGCAACCTGCACGTGACCCAGGGGGCTGGCCGCTTCATACCCTGCAGCCCGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523458.1
CDS-3UTR CAA 90 bp GGGCTGCAGGGTATGAAGCGGCCAGCCCCCTGGGTCACGTGCAGGTTGCCATCTTGGGTCACGTGCAGGTaGCCATCTTCCAGCATGATC +
Preference number: 5 (lower is better)
Translates to: GLQGMKRPAPWVTCRLPSWVTCR*PSSSMI
Trigger: GATCATGCTGGAAGATGGCAACCTGCACGTGACCCA...AGATGGCAACCTGCACGTGACCCAGGGGGCTGGCCGCTTCATACCCTGCAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523458.1
CDS-3UTR CAA 90 bp ATTTCCCAAACACCCTTTCCACTACCCAAGCCCGTGGCCCTCAGAGAGAACCGGGCGGGGGTGCCACCTTaGGGGGTGGTGGTCAGGTCA +
Preference number: 5 (lower is better)
Translates to: ISQTPFPLPKPVALRENRAGVPP*GVVVRS
Trigger: TGACCTGACCACCACCCCCAAAGGTGGCACCCCCGC...CCGGTTCTCTCTGAGGGCCACGGGCTTGGGTAGTGGAAAGGGTGTTTGGGAAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS GCA 90 bp CACCTTTGGGGGTGGTGGTCAGGTCAAACACAGGCCCATCGTACATaGCCCTTGGGACGGCATGCAGGTCTGCCATCTTCCTCCGTGCTT +
Preference number: 5 (lower is better)
Translates to: HLWGWWSGQTQAHRT*PLGRHAGLPSSSVL
Trigger: AAGCACGGAGGAAGATGGCAGACCTGCATGCCGTCCCAAGGGGCATGTACGATGGGCCTGTGTTTGACCTGACCACCACCCCCAAAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp GCTGCAGGGTATGAAGCGGCCAGCCCCCTGGGTCACGTGCAGGTTGCCATCTTCGCAGACTGGTGGTTCTaGGCAGAGACGATCTTCACA +
Preference number: 5 (lower is better)
Translates to: AAGYEAASPLGHVQVAIFADWWF*AETIFT
Trigger: TGTGAAGATCGTCTCTGCCAAGAACCACCAGTCTGC...GAAGATGGCAACCTGCACGTGACCCAGGGGGCTGGCCGCTTCATACCCTGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523458.1
CDS-3UTR CAA 90 bp ATCCAGCGTGCCTTCCTACACTTGCATGAGGTGCCAGTGAATTCGAAGAGGGCCCATCGTACATGCCCCTaGGGACGGCATGCAGGTCTG +
Preference number: 5 (lower is better)
Translates to: IQRAFLHLHEVPVNSKRAHRTCP*GRHAGL
Trigger: CAGACCTGCATGCCGTCCCAAGGGGCATGTACGATG...GGCCCTCTTCGAATTCACTGGCACCTCATGCAAGTGTAGGAAGGCACGCTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp TGTGCCAGGATCGAGAGAATCAAACACAAACTGCCTGTAAGAGAGGCCCTTCATGGCGCCACGATGCGCTaGCTGGCTGAGCGAACCCCC +
Preference number: 5 (lower is better)
Translates to: CARIERIKHKLPVREALHGATMR*LAERTP
Trigger: GGGGGTTCGCTCAGCCAGCAAGCGCATCGTGGCGCC...ATGAAGGGCCTCTCTTACAGGCAGTTTGTGTTTGATTCTCTCGATCCTGGCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp GAATCAAAGGTTCTGGTGGAATGGTTCACTTCGGAAGTCCCAAGGGCAGTGCGGTGCTCCGATTCCTGCTaGTCCCTAGCGAGCCAGCGA +
Preference number: 5 (lower is better)
Translates to: ESKVLVEWFTSEVPRAVRCSDSC*SLASQR
Trigger: TCGCTGGCTCGCTAGGGACAAGCAGGAATCGGAGCA...CCGCACTGCCCTTGGGACTTCCGAAGTGAACCATTCCACCAGAACCTTTGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343218.10
CDS-3UTR CAA 90 bp AATTTCCCAAACACCCTTTCCACTACCCAAGCCCGTGGCCCTCAGAGAGAACCGGAGAACCGGGATGGATaGCCATCTGGGTTCAGAGGC +
Preference number: 5 (lower is better)
Translates to: NFPNTLSTTQARGPQREPENRDG*PSGFRG
Trigger: GCCTCTGAACCCAGATGGCAATCCATCCCGGTTCTC...CGGTTCTCTCTGAGGGCCACGGGCTTGGGTAGTGGAAAGGGTGTTTGGGAAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp ATTTCCCAAACACCCTTTCCACTACCCAAGCCCGTGGCCCTCAGAGAGAACCGGGCAGACTGGTGGTTCTaGGCAGAGACGATCTTCACA +
Preference number: 5 (lower is better)
Translates to: ISQTPFPLPKPVALRENRADWWF*AETIFT
Trigger: TGTGAAGATCGTCTCTGCCAAGAACCACCAGTCTGC...CCGGTTCTCTCTGAGGGCCACGGGCTTGGGTAGTGGAAAGGGTGTTTGGGAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp CCAGGGCAGCCCATGAGTGTATCTGGGACTCAAGCTGGAGTTTTCCAGGGGAGATCTTCCAGCATGATCTaGCCCTGGCAGATGACAACC +
Preference number: 5 (lower is better)
Translates to: PGQPMSVSGTQAGVFQGRSSSMI*PWQMTT
Trigger: GGTTGTCATCTGCCAGGGCAAGATCATGCTGGAAGA...TCTCCCCTGGAAAACTCCAGCTTGAGTCCCAGATACACTCATGGGCTGCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp GCGGCTATCTTCCATGGAAATAACGTACGTCATCAACACAATATACAACACCCCGGCGCCACGATGCGCTaGCTGGCTGAGCGAACCCCC +
Preference number: 5 (lower is better)
Translates to: AAIFHGNNVRHQHNIQHPGATMR*LAERTP
Trigger: GGGGGTTCGCTCAGCCAGCAAGCGCATCGTGGCGCC...GGGGTGTTGTATATTGTGTTGATGACGTACGTTATTTCCATGGAAGATAGCCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp TGTGCCAGGATCGAGAGAATCAAACACAAACTGCCTGTAAGAGAGGCCCTTCATTCTGCACCCTCCACCTaGCTCCAGGCTCCCACCACC +
Preference number: 5 (lower is better)
Translates to: CARIERIKHKLPVREALHSAPST*LQAPTT
Trigger: GGTGGTGGGAGCCTGGAGCAAGGTGGAGGGTGCAGA...ATGAAGGGCCTCTCTTACAGGCAGTTTGTGTTTGATTCTCTCGATCCTGGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp ATCCAGCGTGCCTTCCTACACTTGCATGAGGTGCCAGTGAATTCGAAGAGGGCCGAAGAGAAGTGTCATTaGCTCTGTCCCTGCCTGGCC +
Preference number: 5 (lower is better)
Translates to: IQRAFLHLHEVPVNSKRAEEKCH*LCPCLA
Trigger: GGCCAGGCAGGGACAGAGCAAATGACACTTCTCTTC...GGCCCTCTTCGAATTCACTGGCACCTCATGCAAGTGTAGGAAGGCACGCTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp AATTTCCCAAACACCCTTTCCACTACCCAAGCCCGTGGCCCTCAGAGAGAACCGTTCTGCACTTCCTGCTaGACGCTGTCATTCCAGTGG +
Preference number: 5 (lower is better)
Translates to: NFPNTLSTTQARGPQREPFCTSC*TLSFQW
Trigger: CCACTGGAATGACAGCGTCAAGCAGGAAGTGCAGAA...CGGTTCTCTCTGAGGGCCACGGGCTTGGGTAGTGGAAAGGGTGTTTGGGAAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp ATCCAGCGTGCCTTCCTACACTTGCATGAGGTGCCAGTGAATTCGAAGAGGGCCCATGGCACAGAGAGGTaGTGCAGAGATGAGTCAGAC +
Preference number: 5 (lower is better)
Translates to: IQRAFLHLHEVPVNSKRAHGTER*CRDESD
Trigger: GTCTGACTCATCTCTGCACAACCTCTCTGTGCCATG...GGCCCTCTTCGAATTCACTGGCACCTCATGCAAGTGTAGGAAGGCACGCTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp AATTTCCCAAACACCCTTTCCACTACCCAAGCCCGTGGCCCTCAGAGAGAACCGCAAGGAAGTTGGGAATaGCCCACCCTACTGGAAAGG +
Preference number: 5 (lower is better)
Translates to: NFPNTLSTTQARGPQREPQGSWE*PTLLER
Trigger: CCTTTCCAGTAGGGTGGGCAATTCCCAACTTCCTTG...CGGTTCTCTCTGAGGGCCACGGGCTTGGGTAGTGGAAAGGGTGTTTGGGAAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp ATCCAGCGTGCCTTCCTACACTTGCATGAGGTGCCAGTGAATTCGAAGAGGGCCCTTGTGGCAAGGAAGTaGGGAATTGCCCACCCTACT +
Preference number: 5 (lower is better)
Translates to: IQRAFLHLHEVPVNSKRALVARK*GIAHPT
Trigger: AGTAGGGTGGGCAATTCCCAACTTCCTTGCCACAAG...GGCCCTCTTCGAATTCACTGGCACCTCATGCAAGTGTAGGAAGGCACGCTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp GGAAATAACGTACGTCATCAACACAATATACAACACCCCTTCCACTCACCTGACTCTGCACCCTCCACCTaGCTCCAGGCTCCCACCACC +
Preference number: 5 (lower is better)
Translates to: GNNVRHQHNIQHPFHSPDSAPST*LQAPTT
Trigger: GGTGGTGGGAGCCTGGAGCAAGGTGGAGGGTGCAGA...GTCAGGTGAGTGGAAGGGGTGTTGTATATTGTGTTGATGACGTACGTTATTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp GTAGGGGACGTGACAAAGAACAGAACCCAAAGACTGCCTGCCTTCTCGGCAGACGCCACTCTTCTCGGTTaGCAAAGACAGAAGAGTGAG +
Preference number: 5 (lower is better)
Translates to: VGDVTKNRTQRLPAFSADATLLG*QRQKSE
Trigger: CTCACTCTTCTGTCTTTGCAAACCGAGAAGAGTGGC...GTCTGCCGAGAAGGCAGGCAGTCTTTGGGTTCTGTTCTTTGTCACGTCCCCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp GAGGTGACCTCGCCGTGTTTAGAAGGAAGCGTCTTTAAGCTGTGGGTGCCCTCAAAGGGCATTTGGGGGTaGTTCCCAGAGCAAGGAAAT +
Preference number: 5 (lower is better)
Translates to: EVTSPCLEGSVFKLWVPSKGIWG*FPEQGN
Trigger: ATTTCCTTGCTCTGGGAACAACCCCCAAATGCCCTT...TGAGGGCACCCACAGCTTAAAGACGCTTCCTTCTAAACACGGCGAGGTCACCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp GAATCAAAGGTTCTGGTGGAATGGTTCACTTCGGAAGTCCCAAGGGCAGTGCGGCGTGCCTTCCTACACTaGCATGAGGTGCCAGTGAAT +
Preference number: 5 (lower is better)
Translates to: ESKVLVEWFTSEVPRAVRRAFLH*HEVPVN
Trigger: ATTCACTGGCACCTCATGCAAGTGTAGGAAGGCACG...CCGCACTGCCCTTGGGACTTCCGAAGTGAACCATTCCACCAGAACCTTTGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp AATTTCCCAAACACCCTTTCCACTACCCAAGCCCGTGGCCCTCAGAGAGAACCGTCAGGTGTCAGCCCTTaGTGGAAACATGACACTCTC +
Preference number: 5 (lower is better)
Translates to: NFPNTLSTTQARGPQREPSGVSP*WKHDTL
Trigger: GAGAGTGTCATGTTTCCACAAAGGGCTGACACCTGA...CGGTTCTCTCTGAGGGCCACGGGCTTGGGTAGTGGAAAGGGTGTTTGGGAAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp CAGAGAGGTTGTGCAGAGATGAGTCAGACTCAGGGGCTGAGTAACAGCAGAGCAGATGTTCTTCTTGCCTaGGTAGGACATGGTGGCGGT +
Preference number: 5 (lower is better)
Translates to: QRGCAEMSQTQGLSNSRADVLLA*VGHGGG
Trigger: ACCGCCACCATGTCCTACCAAGGCAAGAAGAACATC...TGCTCTGCTGTTACTCAGCCCCTGAGTCTGACTCATCTCTGCACAACCTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398514.7
CDS-3UTR CAA 90 bp GAGGTGACCTCGCCGTGTTTAGAAGGAAGCGTCTTTAAGCTGTGGGTGCCCTCAGGAATGGCTGTGAAGTaGTCCTTCCCAATTGCTTTC +
Preference number: 5 (lower is better)
Translates to: EVTSPCLEGSVFKLWVPSGMAVK*SFPIAF
Trigger: GAAAGCAATTGGGAAGGACAACTTCACAGCCATTCC...TGAGGGCACCCACAGCTTAAAGACGCTTCCTTCTAAACACGGCGAGGTCACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp AATTTCCCAAACACCCTTTCCACTACCCAAGCCCGTGGCCCTCAGAGAGAACCGGGAATGGCTGTGAAGTaGTCCTTCCCAATTGCTTTC +
Preference number: 5 (lower is better)
Translates to: NFPNTLSTTQARGPQREPGMAVK*SFPIAF
Trigger: GAAAGCAATTGGGAAGGACAACTTCACAGCCATTCC...CGGTTCTCTCTGAGGGCCACGGGCTTGGGTAGTGGAAAGGGTGTTTGGGAAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp GCAAACACTGGCACAATCAAGCAGGTGGAAGAAATGGTTGGGTCTTGGCATTTTCGCTCCTCCACACCATaGGTGCCCTCAGGAATGGCT +
Preference number: 5 (lower is better)
Translates to: ANTGTIKQVEEMVGSWHFRSSTP*VPSGMA
Trigger: AGCCATTCCTGAGGGCACCAATGGTGTGGAGGAGCG...AAAATGCCAAGACCCAACCATTTCTTCCACCTGCTTGATTGTGCCAGTGTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp GTTGTTCCCAGAGCAAGGAAATCTTGTGCAGAATCAAAGGTTCTGGTGGAATGGCGCTCCTCCACACCATaGGTGCCCTCAGGAATGGCT +
Preference number: 5 (lower is better)
Translates to: VVPRARKSCAESKVLVEWRSSTP*VPSGMA
Trigger: AGCCATTCCTGAGGGCACCAATGGTGTGGAGGAGCG...CCATTCCACCAGAACCTTTGATTCTGCACAAGATTTCCTTGCTCTGGGAACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp TTGTACTCTGCCGCAGACTGGTGGTTCTTGGCAGAGACGATCTTCACAGCATCTTCTTCCAGCATGATCTaGCCCTGGCAGATGACAACC +
Preference number: 5 (lower is better)
Translates to: LYSAADWWFLAETIFTASSSSMI*PWQMTT
Trigger: GGTTGTCATCTGCCAGGGCAAGATCATGCTGGAAGA...AGATGCTGTGAAGATCGTCTCTGCCAAGAACCACCAGTCTGCGGCAGAGTACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523458.1
CDS-3UTR CAA 90 bp ATAACGTACGTCATCAACACAATATACAACACCCCTTCCACTCACCTGACCCACCATCGTACATGCCCCTaGGGACGGCATGCAGGTCTG +
Preference number: 5 (lower is better)
Translates to: ITYVINTIYNTPSTHLTHHRTCP*GRHAGL
Trigger: CAGACCTGCATGCCGTCCCAAGGGGCATGTACGATG...GTGGGTCAGGTGAGTGGAAGGGGTGTTGTATATTGTGTTGATGACGTACGTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp AGAAAACAAAGCAATATTCGTAAAGCTAGGCAAGCGAGCGTAACATTGGAGAAAGGCGCCACGATGCGCTaGCTGGCTGAGCGAACCCCC +
Preference number: 5 (lower is better)
Translates to: RKQSNIRKARQASVTLEKGATMR*LAERTP
Trigger: GGGGGTTCGCTCAGCCAGCAAGCGCATCGTGGCGCC...TTTCTCCAATGTTACGCTCGCTTGCCTAGCTTTACGAATATTGCTTTGTTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
CDS-3UTR CAA 90 bp GAATCAAAGGTTCTGGTGGAATGGTTCACTTCGGAAGTCCCAAGGGCAGTGCGGCTTCTGCCCCTCTCTTaGAGGAAGGCTTGCTTAACT +
Preference number: 5 (lower is better)
Translates to: ESKVLVEWFTSEVPRAVRLLPLS*RKACLT
Trigger: AGTTAAGCAAGCCTTCCTCAAAGAGAGGGGCAGAAG...CCGCACTGCCCTTGGGACTTCCGAAGTGAACCATTCCACCAGAACCTTTGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp CCCATGAGGAAGACTGCATCATGTCACTTCCACTCACTTGGGGAGATTCTAGGAGAAGAGAAGTGTCATTaGCTCTGTCCCTGCCTGGCC +
Preference number: 5 (lower is better)
Translates to: PMRKTASCHFHSLGEILGEEKCH*LCPCLA
Trigger: GGCCAGGCAGGGACAGAGCAAATGACACTTCTCTTC...TCCTAGAATCTCCCCAAGTGAGTGGAAGTGACATGATGCAGTCTTCCTCATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp CCAGGGCAGCCCATGAGTGTATCTGGGACTCAAGCTGGAGTTTTCCAGGGGAGAGGGAAATCCTGTTCCTaGGCTATCTCCAAATTCCTT +
Preference number: 5 (lower is better)
Translates to: PGQPMSVSGTQAGVFQGRGKSCS*AISKFL
Trigger: AAGGAATTTGGAGATAGCCAAGGAACAGGATTTCCC...TCTCCCCTGGAAAACTCCAGCTTGAGTCCCAGATACACTCATGGGCTGCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp TGCCATCTTCCTCCGTGCTTTAATGCGCTTGTAGACATAGTCGGAGAACGGGCTATCCCTTCAAAGATGTaGTACTCTGCCGCAGACTGG +
Preference number: 5 (lower is better)
Translates to: CHLPPCFNALVDIVGERAIPSKM*YSAADW
Trigger: CCAGTCTGCGGCAGAGTACAACATCTTTGAAGGGAT...AGCCCGTTCTCCGACTATGTCTACAAGCGCATTAAAGCACGGAGGAAGATGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523458.1
CDS-3UTR CAA 90 bp CTCCCTCTGCTCAAGACTGACTTTGGCTTTCCCAGTTCCCCACTTGACTTTCATTCTTCCAGCATGATCTaGCCCTGGCAGATGACAACC +
Preference number: 5 (lower is better)
Translates to: LPLLKTDFGFPSSPLDFHSSSMI*PWQMTT
Trigger: GGTTGTCATCTGCCAGGGCAAGATCATGCTGGAAGA...ATGAAAGTCAAGTGGGGAACTGGGAAAGCCAAAGTCAGTCTTGAGCAGAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp TCCCTCTGCTCAAGACTGACTTTGGCTTTCCCAGTTCCCCACTTGACTTTCATATGGGTCACGTGCAGGTaGCCATCTTCCAGCATGATC +
Preference number: 5 (lower is better)
Translates to: SLCSRLTLAFPVPHLTFIWVTCR*PSSSMI
Trigger: GATCATGCTGGAAGATGGCAACCTGCACGTGACCCA...TATGAAAGTCAAGTGGGGAACTGGGAAAGCCAAAGTCAGTCTTGAGCAGAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp TCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCAGCGGGGGTGCCACCTTaGGGGGTGGTGGTCAGGTCA +
Preference number: 5 (lower is better)
Translates to: SLDHNRLDSLSFLNIGVPAGVPP*GVVVRS
Trigger: TGACCTGACCACCACCCCCAAAGGTGGCACCCCCGC...TGGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
CDS-3UTR CAA 90 bp GAATCAAAGGTTCTGGTGGAATGGTTCACTTCGGAAGTCCCAAGGGCAGTGCGGTGGCAAAGGACAGCTTaGGAATCAGATAGACGATCC +
Preference number: 5 (lower is better)
Translates to: ESKVLVEWFTSEVPRAVRWQRTA*ESDRRS
Trigger: GGATCGTCTATCTGATTCCAAAGCTGTCCTTTGCCA...CCGCACTGCCCTTGGGACTTCCGAAGTGAACCATTCCACCAGAACCTTTGATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp GTTGTTCCCAGAGCAAGGAAATCTTGTGCAGAATCAAAGGTTCTGGTGGAATGGGAGAACCGGGATGGATaGCCATCTGGGTTCAGAGGC +
Preference number: 5 (lower is better)
Translates to: VVPRARKSCAESKVLVEWENRDG*PSGFRG
Trigger: GCCTCTGAACCCAGATGGCAATCCATCCCGGTTCTC...CCATTCCACCAGAACCTTTGATTCTGCACAAGATTTCCTTGCTCTGGGAACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp GTGGACGCTCAGAAGCGAGTTTATGTGTGTCTTTTCCTCTATCTGCTGGCTGTGCTTGTGGCAAGGAAGTaGGGAATTGCCCACCCTACT +
Preference number: 5 (lower is better)
Translates to: VDAQKRVYVCLFLYLLAVLVARK*GIAHPT
Trigger: AGTAGGGTGGGCAATTCCCAACTTCCTTGCCACAAG...CACAGCCAGCAGATAGAGGAAAAGACACACATAAACTCGCTTCTGAGCGTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp TCCCTCTGCTCAAGACTGACTTTGGCTTTCCCAGTTCCCCACTTGACTTTCATAACGATTCTGCCTCCCTaGATAAGGAGACGGTCACTC +
Preference number: 5 (lower is better)
Translates to: SLCSRLTLAFPVPHLTFITILPP*IRRRSL
Trigger: GAGTGACCGTCTCCTTATCAAGGGAGGCAGAATCGT...TATGAAAGTCAAGTGGGGAACTGGGAAAGCCAAAGTCAGTCTTGAGCAGAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp TGCCATCTTCCTCCGTGCTTTAATGCGCTTGTAGACATAGTCGGAGAACGGGCTTACAGGTTGAAGATCTaGGCAGCGTTTGTGCTTGTC +
Preference number: 5 (lower is better)
Translates to: CHLPPCFNALVDIVGERAYRLKI*AAFVLV
Trigger: GACAAGCACAAACGCTGCCAAGATCTTCAACCTGTA...AGCCCGTTCTCCGACTATGTCTACAAGCGCATTAAAGCACGGAGGAAGATGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523458.1
CDS-3UTR CAA 90 bp TGCCATCTTCCTCCGTGCTTTAATGCGCTTGTAGACATAGTCGGAGAACGGGCTACAGATATTCTTCCCTaGCGGGGATACAGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: CHLPPCFNALVDIVGERATDILP*RGYRLK
Trigger: CTTCAACCTGTATCCCCGCAAGGGAAGAATATCTGT...AGCCCGTTCTCCGACTATGTCTACAAGCGCATTAAAGCACGGAGGAAGATGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523458.1
CDS-3UTR CAA 90 bp CTGCTCTTCTCTTCAAAGCACTTAGTACACAGGGTTACAGGTGCTACCACTTGGGCAGACTGGTGGTTCTaGGCAGAGACGATCTTCACA +
Preference number: 5 (lower is better)
Translates to: LLFSSKHLVHRVTGATTWADWWF*AETIFT
Trigger: TGTGAAGATCGTCTCTGCCAAGAACCACCAGTCTGC...CCAAGTGGTAGCACCTGTAACCCTGTGTACTAAGTGCTTTGAAGAGAAGAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp TTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCATTTGCGGGGGTGCCACCTTaGGGGGTGGTGGTCAGGTCA +
Preference number: 5 (lower is better)
Translates to: LDHNRLDSLSFLNIGVPFAGVPP*GVVVRS
Trigger: TGACCTGACCACCACCCCCAAAGGTGGCACCCCCGC...AAATGGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
CDS-3UTR CAA 90 bp CCAGGGCAGCCCATGAGTGTATCTGGGACTCAAGCTGGAGTTTTCCAGGGGAGATTAGATCACAACCGTTaGGATTCGCTTTCCTTCTTA +
Preference number: 5 (lower is better)
Translates to: PGQPMSVSGTQAGVFQGRLDHNR*DSLSFL
Trigger: TAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAA...TCTCCCCTGGAAAACTCCAGCTTGAGTCCCAGATACACTCATGGGCTGCCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp AGAGGCTTCCTGAGCTCATGTTGTTCCTCCCAAGGGCATTTGGGGGTTGTTCCCAAGACCCCCACATCTTaGAAGTGTAAACTAAGAGCT +
Preference number: 5 (lower is better)
Translates to: RGFLSSCCSSQGHLGVVPKTPTS*KCKLRA
Trigger: AGCTCTTAGTTTACACTTCAAAGATGTGGGGGTCTT...GGGAACAACCCCCAAATGCCCTTGGGAGGAACAACATGAGCTCAGGAAGCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp GTGGACGCTCAGAAGCGAGTTTATGTGTGTCTTTTCCTCTATCTGCTGGCTGTGGTGCGGATGACCGATTaGGCCATGGAAGACTTATCT +
Preference number: 5 (lower is better)
Translates to: VDAQKRVYVCLFLYLLAVVRMTD*AMEDLS
Trigger: AGATAAGTCTTCCATGGCCAAATCGGTCATCCGCAC...CACAGCCAGCAGATAGAGGAAAAGACACACATAAACTCGCTTCTGAGCGTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp CTCCCTCTGCTCAAGACTGACTTTGGCTTTCCCAGTTCCCCACTTGACTTTCATGTGCGGATGACCGATTaGGCCATGGAAGACTTATCT +
Preference number: 5 (lower is better)
Translates to: LPLLKTDFGFPSSPLDFHVRMTD*AMEDLS
Trigger: AGATAAGTCTTCCATGGCCAAATCGGTCATCCGCAC...ATGAAAGTCAAGTGGGGAACTGGGAAAGCCAAAGTCAGTCTTGAGCAGAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp CTCCCTCTGCTCAAGACTGACTTTGGCTTTCCCAGTTCCCCACTTGACTTTCATAAGGGCATTTGGGGGTaGTTCCCAGAGCAAGGAAAT +
Preference number: 5 (lower is better)
Translates to: LPLLKTDFGFPSSPLDFHKGIWG*FPEQGN
Trigger: ATTTCCTTGCTCTGGGAACAACCCCCAAATGCCCTT...ATGAAAGTCAAGTGGGGAACTGGGAAAGCCAAAGTCAGTCTTGAGCAGAGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp GTGGACGCTCAGAAGCGAGTTTATGTGTGTCTTTTCCTCTATCTGCTGGCTGTGCTTCCTGAGCTCATGTaGTTCCTCCCAAGGGCATTT +
Preference number: 5 (lower is better)
Translates to: VDAQKRVYVCLFLYLLAVLPELM*FLPRAF
Trigger: AAATGCCCTTGGGAGGAACAACATGAGCTCAGGAAG...CACAGCCAGCAGATAGAGGAAAAGACACACATAAACTCGCTTCTGAGCGTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp CTGCTCTTCTCTTCAAAGCACTTAGTACACAGGGTTACAGGTGCTACCACTTGGCAAGGAAGTTGGGAATaGCCCACCCTACTGGAAAGG +
Preference number: 5 (lower is better)
Translates to: LLFSSKHLVHRVTGATTWQGSWE*PTLLER
Trigger: CCTTTCCAGTAGGGTGGGCAATTCCCAACTTCCTTG...CCAAGTGGTAGCACCTGTAACCCTGTGTACTAAGTGCTTTGAAGAGAAGAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp CTCCCTCTGCTCAAGACTGACTTTGGCTTTCCCAGTTCCCCACTTGACTTTCATTTAACCCCTTTGTCCTaGATGAGGTTCTGCACTTCC +
Preference number: 5 (lower is better)
Translates to: LPLLKTDFGFPSSPLDFHLTPLS*MRFCTS
Trigger: GGAAGTGCAGAACCTCATCAAGGACAAAGGGGTTAA...ATGAAAGTCAAGTGGGGAACTGGGAAAGCCAAAGTCAGTCTTGAGCAGAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp GTGGACGCTCAGAAGCGAGTTTATGTGTGTCTTTTCCTCTATCTGCTGGCTGTGAAGGAGTTAACCCCTTaGTCCTTGATGAGGTTCTGC +
Preference number: 5 (lower is better)
Translates to: VDAQKRVYVCLFLYLLAVKELTP*SLMRFC
Trigger: GCAGAACCTCATCAAGGACAAAGGGGTTAACTCCTT...CACAGCCAGCAGATAGAGGAAAAGACACACATAAACTCGCTTCTGAGCGTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp GCAAACACTGGCACAATCAAGCAGGTGGAAGAAATGGTTGGGTCTTGGCATTTTATTCTCAGCATGAACTaGAGCAATGGCCCCCAGCTC +
Preference number: 5 (lower is better)
Translates to: ANTGTIKQVEEMVGSWHFILSMN*SNGPQL
Trigger: GAGCTGGGGGCCATTGCTCAAGTTCATGCTGAGAAT...AAAATGCCAAGACCCAACCATTTCTTCCACCTGCTTGATTGTGCCAGTGTTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp CTCCCTCTGCTCAAGACTGACTTTGGCTTTCCCAGTTCCCCACTTGACTTTCATACAGATATTCTTCCCTaGCGGGGATACAGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: LPLLKTDFGFPSSPLDFHTDILP*RGYRLK
Trigger: CTTCAACCTGTATCCCCGCAAGGGAAGAATATCTGT...ATGAAAGTCAAGTGGGGAACTGGGAAAGCCAAAGTCAGTCTTGAGCAGAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp GAAGACTGCATCATGTCACTTCCACTCACTTGGGGAGATTCTAGGACTGAGACAATCCCTTCAAAGATGTaGTACTCTGCCGCAGACTGG +
Preference number: 5 (lower is better)
Translates to: EDCIMSLPLTWGDSRTETIPSKM*YSAADW
Trigger: CCAGTCTGCGGCAGAGTACAACATCTTTGAAGGGAT...TGTCTCAGTCCTAGAATCTCCCCAAGTGAGTGGAAGTGACATGATGCAGTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp TGTGCCAGGATCGAGAGAATCAAACACAAACTGCCTGTAAGAGAGGCCCTTCATATCCCTTCAAAGATGTaGTACTCTGCCGCAGACTGG +
Preference number: 5 (lower is better)
Translates to: CARIERIKHKLPVREALHIPSKM*YSAADW
Trigger: CCAGTCTGCGGCAGAGTACAACATCTTTGAAGGGAT...ATGAAGGGCCTCTCTTACAGGCAGTTTGTGTTTGATTCTCTCGATCCTGGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp GTTGTTCCCAGAGCAAGGAAATCTTGTGCAGAATCAAAGGTTCTGGTGGAATGGTGCTCAAGACTGACTTaGGCTTTCCCAGTTCCCCAC +
Preference number: 5 (lower is better)
Translates to: VVPRARKSCAESKVLVEWCSRLT*AFPVPH
Trigger: GTGGGGAACTGGGAAAGCCAAAGTCAGTCTTGAGCA...CCATTCCACCAGAACCTTTGATTCTGCACAAGATTTCCTTGCTCTGGGAACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp GTTGTTCCCAGAGCAAGGAAATCTTGTGCAGAATCAAAGGTTCTGGTGGAATGGTACAGGTGCTACCACTaGGATTCCCCAGAGCATGGA +
Preference number: 5 (lower is better)
Translates to: VVPRARKSCAESKVLVEWYRCYH*DSPEHG
Trigger: TCCATGCTCTGGGGAATCCAAGTGGTAGCACCTGTA...CCATTCCACCAGAACCTTTGATTCTGCACAAGATTTCCTTGCTCTGGGAACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp CTCCCTCTGCTCAAGACTGACTTTGGCTTTCCCAGTTCCCCACTTGACTTTCATGGCCGGGACTCACCATaGTTTTCTTTTCCTAAACCT +
Preference number: 5 (lower is better)
Translates to: LPLLKTDFGFPSSPLDFHGRDSP*FSFPKP
Trigger: AGGTTTAGGAAAAGAAAACAATGGTGAGTCCCGGCC...ATGAAAGTCAAGTGGGGAACTGGGAAAGCCAAAGTCAGTCTTGAGCAGAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp GAAGACTGCATCATGTCACTTCCACTCACTTGGGGAGATTCTAGGACTGAGACATCAGGTGTCAGCCCTTaGTGGAAACATGACACTCTC +
Preference number: 5 (lower is better)
Translates to: EDCIMSLPLTWGDSRTETSGVSP*WKHDTL
Trigger: GAGAGTGTCATGTTTCCACAAAGGGCTGACACCTGA...TGTCTCAGTCCTAGAATCTCCCCAAGTGAGTGGAAGTGACATGATGCAGTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp GTTGTTCCCAGAGCAAGGAAATCTTGTGCAGAATCAAAGGTTCTGGTGGAATGGGAAAGCCTGGGAAGCTaGTGGCAAGGAAGTTGGGAA +
Preference number: 5 (lower is better)
Translates to: VVPRARKSCAESKVLVEWESLGS*WQGSWE
Trigger: TTCCCAACTTCCTTGCCACAAGCTTCCCAGGCTTTC...CCATTCCACCAGAACCTTTGATTCTGCACAAGATTTCCTTGCTCTGGGAACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp AGAAAACAAAGCAATATTCGTAAAGCTAGGCAAGCGAGCGTAACATTGGAGAAATTCTGCAACACCTCTTaGCCGGTGGCGCTCCGGATC +
Preference number: 5 (lower is better)
Translates to: RKQSNIRKARQASVTLEKFCNTS*PVALRI
Trigger: GATCCGGAGCGCCACCGGCAAAGAGGTGTTGCAGAA...TTTCTCCAATGTTACGCTCGCTTGCCTAGCTTTACGAATATTGCTTTGTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343218.10
CDS-3UTR CAA 90 bp TTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCCGGTCACTCTTGTCCTaGGGGCCGAGGTTCTGCAAC +
Preference number: 5 (lower is better)
Translates to: FFRSQPFGFAFLLKYRCTRSLLS*GPRFCN
Trigger: GTTGCAGAACCTCGGCCCCAAGGACAAGAGTGACCG...GGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343218.10
CDS-3UTR CAA 90 bp GCGGCTATCTTCCATGGAAATAACGTACGTCATCAACACAATATACAACACCCCTTCTGCACTTCCTGCTaGACGCTGTCATTCCAGTGG +
Preference number: 5 (lower is better)
Translates to: AAIFHGNNVRHQHNIQHPFCTSC*TLSFQW
Trigger: CCACTGGAATGACAGCGTCAAGCAGGAAGTGCAGAA...GGGGTGTTGTATATTGTGTTGATGACGTACGTTATTTCCATGGAAGATAGCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp CTGCTCTTCTCTTCAAAGCACTTAGTACACAGGGTTACAGGTGCTACCACTTGGTTAACCCCTTTGTCCTaGATGAGGTTCTGCACTTCC +
Preference number: 5 (lower is better)
Translates to: LLFSSKHLVHRVTGATTWLTPLS*MRFCTS
Trigger: GGAAGTGCAGAACCTCATCAAGGACAAAGGGGTTAA...CCAAGTGGTAGCACCTGTAACCCTGTGTACTAAGTGCTTTGAAGAGAAGAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp GCGGCTATCTTCCATGGAAATAACGTACGTCATCAACACAATATACAACACCCCATTCTCAGCATGAACTaGAGCAATGGCCCCCAGCTC +
Preference number: 5 (lower is better)
Translates to: AAIFHGNNVRHQHNIQHPILSMN*SNGPQL
Trigger: GAGCTGGGGGCCATTGCTCAAGTTCATGCTGAGAAT...GGGGTGTTGTATATTGTGTTGATGACGTACGTTATTTCCATGGAAGATAGCCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp ATAACGTACGTCATCAACACAATATACAACACCCCTTCCACTCACCTGACCCACTTCCAACATGCGGGTTaGCTCCTGGGCAATGATATC +
Preference number: 5 (lower is better)
Translates to: ITYVINTIYNTPSTHLTHFQHAG*LLGNDI
Trigger: GATATCATTGCCCAGGAGCAAACCCGCATGTTGGAA...GTGGGTCAGGTGAGTGGAAGGGGTGTTGTATATTGTGTTGATGACGTACGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp TGTGCCAGGATCGAGAGAATCAAACACAAACTGCCTGTAAGAGAGGCCCTTCATTACAGGTTGAAGATCTaGGCAGCGTTTGTGCTTGTC +
Preference number: 5 (lower is better)
Translates to: CARIERIKHKLPVREALHYRLKI*AAFVLV
Trigger: GACAAGCACAAACGCTGCCAAGATCTTCAACCTGTA...ATGAAGGGCCTCTCTTACAGGCAGTTTGTGTTTGATTCTCTCGATCCTGGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp TGTGCCAGGATCGAGAGAATCAAACACAAACTGCCTGTAAGAGAGGCCCTTCATACAGATATTCTTCCCTaGCGGGGATACAGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: CARIERIKHKLPVREALHTDILP*RGYRLK
Trigger: CTTCAACCTGTATCCCCGCAAGGGAAGAATATCTGT...ATGAAGGGCCTCTCTTACAGGCAGTTTGTGTTTGATTCTCTCGATCCTGGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp GAATCAAAGGTTCTGGTGGAATGGTTCACTTCGGAAGTCCCAAGGGCAGTGCGGTTAGATCACAACCGTTaGGATTCGCTTTCCTTCTTA +
Preference number: 5 (lower is better)
Translates to: ESKVLVEWFTSEVPRAVRLDHNR*DSLSFL
Trigger: TAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAA...CCGCACTGCCCTTGGGACTTCCGAAGTGAACCATTCCACCAGAACCTTTGATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp ATAACGTACGTCATCAACACAATATACAACACCCCTTCCACTCACCTGACCCACGCCACTCTTCTCGGTTaGCAAAGACAGAAGAGTGAG +
Preference number: 5 (lower is better)
Translates to: ITYVINTIYNTPSTHLTHATLLG*QRQKSE
Trigger: CTCACTCTTCTGTCTTTGCAAACCGAGAAGAGTGGC...GTGGGTCAGGTGAGTGGAAGGGGTGTTGTATATTGTGTTGATGACGTACGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp GCGGCTATCTTCCATGGAAATAACGTACGTCATCAACACAATATACAACACCCCGGGGAAACAGGTGGTTaGGAATGGAAAGGTGGAACC +
Preference number: 5 (lower is better)
Translates to: AAIFHGNNVRHQHNIQHPGETGG*EWKGGT
Trigger: GGTTCCACCTTTCCATTCCAAACCACCTGTTTCCCC...GGGGTGTTGTATATTGTGTTGATGACGTACGTTATTTCCATGGAAGATAGCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp ATAACGTACGTCATCAACACAATATACAACACCCCTTCCACTCACCTGACCCACCTTCCTGAGCTCATGTaGTTCCTCCCAAGGGCATTT +
Preference number: 5 (lower is better)
Translates to: ITYVINTIYNTPSTHLTHLPELM*FLPRAF
Trigger: AAATGCCCTTGGGAGGAACAACATGAGCTCAGGAAG...GTGGGTCAGGTGAGTGGAAGGGGTGTTGTATATTGTGTTGATGACGTACGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp TTGAGGCTTATTGATTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAGGAGACGGTCACTCTaGTCCTTGGGGCCGAGGTTC +
Preference number: 5 (lower is better)
Translates to: LRLIDSLDHNRLDSLSFLRRRSL*SLGPRF
Trigger: GAACCTCGGCCCCAAGGACAAGAGTGACCGTCTCCT...TAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAATCAATAAGCCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343218.10
CDS-3UTR CAA 90 bp GCGGCTATCTTCCATGGAAATAACGTACGTCATCAACACAATATACAACACCCCCTTCTGCCCCTCTCTTaGAGGAAGGCTTGCTTAACT +
Preference number: 5 (lower is better)
Translates to: AAIFHGNNVRHQHNIQHPLLPLS*RKACLT
Trigger: AGTTAAGCAAGCCTTCCTCAAAGAGAGGGGCAGAAG...GGGGTGTTGTATATTGTGTTGATGACGTACGTTATTTCCATGGAAGATAGCCGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp GAAGACTGCATCATGTCACTTCCACTCACTTGGGGAGATTCTAGGACTGAGACAGGGAAATCCTGTTCCTaGGCTATCTCCAAATTCCTT +
Preference number: 5 (lower is better)
Translates to: EDCIMSLPLTWGDSRTETGKSCS*AISKFL
Trigger: AAGGAATTTGGAGATAGCCAAGGAACAGGATTTCCC...TGTCTCAGTCCTAGAATCTCCCCAAGTGAGTGGAAGTGACATGATGCAGTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp CTCCCTCTGCTCAAGACTGACTTTGGCTTTCCCAGTTCCCCACTTGACTTTCATAAGACCCCCACATCTTaGAAGTGTAAACTAAGAGCT +
Preference number: 5 (lower is better)
Translates to: LPLLKTDFGFPSSPLDFHKTPTS*KCKLRA
Trigger: AGCTCTTAGTTTACACTTCAAAGATGTGGGGGTCTT...ATGAAAGTCAAGTGGGGAACTGGGAAAGCCAAAGTCAGTCTTGAGCAGAGGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp GCAAACACTGGCACAATCAAGCAGGTGGAAGAAATGGTTGGGTCTTGGCATTTTGGCCGGGACTCACCATaGTTTTCTTTTCCTAAACCT +
Preference number: 5 (lower is better)
Translates to: ANTGTIKQVEEMVGSWHFGRDSP*FSFPKP
Trigger: AGGTTTAGGAAAAGAAAACAATGGTGAGTCCCGGCC...AAAATGCCAAGACCCAACCATTTCTTCCACCTGCTTGATTGTGCCAGTGTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp GTTGTTCCCAGAGCAAGGAAATCTTGTGCAGAATCAAAGGTTCTGGTGGAATGGTGGCAAAGGACAGCTTaGGAATCAGATAGACGATCC +
Preference number: 5 (lower is better)
Translates to: VVPRARKSCAESKVLVEWWQRTA*ESDRRS
Trigger: GGATCGTCTATCTGATTCCAAAGCTGTCCTTTGCCA...CCATTCCACCAGAACCTTTGATTCTGCACAAGATTTCCTTGCTCTGGGAACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp ATTGATTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTCGCTCCTCCACACCATaGGTGCCCTCAGGAATGGCT +
Preference number: 5 (lower is better)
Translates to: IDSLDHNRLDSLSFLNIGRSSTP*VPSGMA
Trigger: AGCCATTCCTGAGGGCACCAATGGTGTGGAGGAGCG...ACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAATCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
CDS-3UTR CAA 90 bp TTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCTGGGTCACGTGCAGGTaGCCATCTTCCAGCATGATC +
Preference number: 5 (lower is better)
Translates to: FFRSQPFGFAFLLKYRCTWVTCR*PSSSMI
Trigger: GATCATGCTGGAAGATGGCAACCTGCACGTGACCCA...GGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp ATTGATTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTCATCGTACATGCCCCTaGGGACGGCATGCAGGTCTG +
Preference number: 5 (lower is better)
Translates to: IDSLDHNRLDSLSFLNIGHRTCP*GRHAGL
Trigger: CAGACCTGCATGCCGTCCCAAGGGGCATGTACGATG...ACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAATCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
CDS-3UTR CAA 90 bp CTGCTCTTCTCTTCAAAGCACTTAGTACACAGGGTTACAGGTGCTACCACTTGGCAGAGCAAGGAAATCTaGTGCAGAATCAAAGGTTCT +
Preference number: 5 (lower is better)
Translates to: LLFSSKHLVHRVTGATTWQSKEI*CRIKGS
Trigger: AGAACCTTTGATTCTGCACAAGATTTCCTTGCTCTG...CCAAGTGGTAGCACCTGTAACCCTGTGTACTAAGTGCTTTGAAGAGAAGAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp TCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCATACAGGTGCTACCACTaGGATTCCCCAGAGCATGGA +
Preference number: 5 (lower is better)
Translates to: SLDHNRLDSLSFLNIGVPYRCYH*DSPEHG
Trigger: TCCATGCTCTGGGGAATCCAAGTGGTAGCACCTGTA...TGGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp TCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCACATGGCACAGAGAGGTaGTGCAGAGATGAGTCAGAC +
Preference number: 5 (lower is better)
Translates to: SLDHNRLDSLSFLNIGVPHGTER*CRDESD
Trigger: GTCTGACTCATCTCTGCACAACCTCTCTGTGCCATG...TGGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp GTGGACGCTCAGAAGCGAGTTTATGTGTGTCTTTTCCTCTATCTGCTGGCTGTGACTCAAAACACAGTTTaGTTCACGGTTCAAACCAAA +
Preference number: 5 (lower is better)
Translates to: VDAQKRVYVCLFLYLLAVTQNTV*FTVQTK
Trigger: TTTGGTTTGAACCGTGAACAAAACTGTGTTTTGAGT...CACAGCCAGCAGATAGAGGAAAAGACACACATAAACTCGCTTCTGAGCGTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp TCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCATTCCAACATGCGGGTTaGCTCCTGGGCAATGATATC +
Preference number: 5 (lower is better)
Translates to: SLDHNRLDSLSFLNIGVPFQHAG*LLGNDI
Trigger: GATATCATTGCCCAGGAGCAAACCCGCATGTTGGAA...TGGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp TCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCACTTCTGCCCCTCTCTTaGAGGAAGGCTTGCTTAACT +
Preference number: 5 (lower is better)
Translates to: SLDHNRLDSLSFLNIGVPLLPLS*RKACLT
Trigger: AGTTAAGCAAGCCTTCCTCAAAGAGAGGGGCAGAAG...TGGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
CDS-3UTR CAA 90 bp TCCCTCTGCTCAAGACTGACTTTGGCTTTCCCAGTTCCCCACTTGACTTTCATATATCGGTGTACCATTTaGGCTTCAAAACAATCTCTT +
Preference number: 5 (lower is better)
Translates to: SLCSRLTLAFPVPHLTFIYRCTI*ASKQSL
Trigger: AAGAGATTGTTTTGAAGCCAAAATGGTACACCGATA...TATGAAAGTCAAGTGGGGAACTGGGAAAGCCAAAGTCAGTCTTGAGCAGAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp TTGAGGCTTATTGATTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTACGTGCCTTCCTACACTaGCATGAGGTGCCAGTGAAT +
Preference number: 5 (lower is better)
Translates to: LRLIDSLDHNRLDSLSFLRAFLH*HEVPVN
Trigger: ATTCACTGGCACCTCATGCAAGTGTAGGAAGGCACG...TAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAATCAATAAGCCTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp AGAAAACAAAGCAATATTCGTAAAGCTAGGCAAGCGAGCGTAACATTGGAGAAATACAGGTTGAAGATCTaGGCAGCGTTTGTGCTTGTC +
Preference number: 5 (lower is better)
Translates to: RKQSNIRKARQASVTLEKYRLKI*AAFVLV
Trigger: GACAAGCACAAACGCTGCCAAGATCTTCAACCTGTA...TTTCTCCAATGTTACGCTCGCTTGCCTAGCTTTACGAATATTGCTTTGTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
CDS-3UTR CAA 90 bp TCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCATACAGGTTGAAGATCTaGGCAGCGTTTGTGCTTGTC +
Preference number: 5 (lower is better)
Translates to: SLDHNRLDSLSFLNIGVPYRLKI*AAFVLV
Trigger: GACAAGCACAAACGCTGCCAAGATCTTCAACCTGTA...TGGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
CDS-3UTR CAA 90 bp AGAAAACAAAGCAATATTCGTAAAGCTAGGCAAGCGAGCGTAACATTGGAGAAAACAGATATTCTTCCCTaGCGGGGATACAGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: RKQSNIRKARQASVTLEKTDILP*RGYRLK
Trigger: CTTCAACCTGTATCCCCGCAAGGGAAGAATATCTGT...TTTCTCCAATGTTACGCTCGCTTGCCTAGCTTTACGAATATTGCTTTGTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
CDS-3UTR CAA 90 bp GTTGTTCCCAGAGCAAGGAAATCTTGTGCAGAATCAAAGGTTCTGGTGGAATGGTATCGGTGTACCATTTaGGCTTCAAAACAATCTCTT +
Preference number: 5 (lower is better)
Translates to: VVPRARKSCAESKVLVEWYRCTI*ASKQSL
Trigger: AAGAGATTGTTTTGAAGCCAAAATGGTACACCGATA...CCATTCCACCAGAACCTTTGATTCTGCACAAGATTTCCTTGCTCTGGGAACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp ATTGATTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTTGCTCAAGACTGACTTaGGCTTTCCCAGTTCCCCAC +
Preference number: 5 (lower is better)
Translates to: IDSLDHNRLDSLSFLNIGCSRLT*AFPVPH
Trigger: GTGGGGAACTGGGAAAGCCAAAGTCAGTCTTGAGCA...ACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAATCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp ATTGATTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGAAAGCCTGGGAAGCTaGTGGCAAGGAAGTTGGGAA +
Preference number: 5 (lower is better)
Translates to: IDSLDHNRLDSLSFLNIGESLGS*WQGSWE
Trigger: TTCCCAACTTCCTTGCCACAAGCTTCCCAGGCTTTC...ACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAATCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS GCA 90 bp GCATCTGAAGCTCATCTCTGCAACATCTTCCTGGAGCTTGTACCATaGCATTTTTCATTCTTGTCAAATTTTTCAGCCAATATTGAGGTC +
Preference number: 5 (lower is better)
Translates to: ASEAHLCNIFLELVP*HFSFLSNFSANIEV
Trigger: GACCTCAATATTGGCTGAAAAATTTGACAAGAATGAAAAATGGCATGGTACAAGCTCCAGGAAGATGTTGCAGAGATGAGCTTCAGATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000504965.1
CDS-3UTR CAA 90 bp TTGAGGCTTATTGATTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAAGGAGTTAACCCCTTaGTCCTTGATGAGGTTCTGC +
Preference number: 5 (lower is better)
Translates to: LRLIDSLDHNRLDSLSFLKELTP*SLMRFC
Trigger: GCAGAACCTCATCAAGGACAAAGGGGTTAACTCCTT...TAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAATCAATAAGCCTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp TTGAGGCTTATTGATTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAGGAATGGCTGTGAAGTaGTCCTTCCCAATTGCTTTC +
Preference number: 5 (lower is better)
Translates to: LRLIDSLDHNRLDSLSFLGMAVK*SFPIAF
Trigger: GAAAGCAATTGGGAAGGACAACTTCACAGCCATTCC...TAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAATCAATAAGCCTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
CDS-3UTR CAA 90 bp TTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCATTTATAGACTGGTGGTTCTaGGCAGAGACGATCTTCACA +
Preference number: 5 (lower is better)
Translates to: LDHNRLDSLSFLNIGVPFIDWWF*AETIFT
Trigger: TGTGAAGATCGTCTCTGCCAAGAACCACCAGTCTAT...AAATGGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520473.1
CDS TCA 90 bp AATAGGTTTATGGCCTCTTTCCAAGCCATTAATAACAACGCAAAATaGAATGCATCTGAAGCTCATCTCTGCAACATCTTCCTGGAGCTT +
Preference number: 5 (lower is better)
Translates to: NRFMASFQAINNNAK*NASEAHLCNIFLEL
Trigger: AAGCTCCAGGAAGATGTTGCAGAGATGAGCTTCAGATGCATTTCATTTTGCGTTGTTATTAATGGCTTGGAAAGAGGCCATAAACCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504965.1
CDS GCA 90 bp CTCTTGCTTACTGGTGTTTATAACACCATCCTATTTACCCTCATCTaGAGACATAATTACCATAATAGGTTTATGGCCTCTTTCCAAGCC +
Preference number: 5 (lower is better)
Translates to: LLLTGVYNTILFTLI*RHNYHNRFMASFQA
Trigger: GGCTTGGAAAGAGGCCATAAACCTATTATGGTAATTATGTCTGCAGATGAGGGTAAATAGGATGGTGTTATAAACACCAGTAAGCAAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504965.1
CDS GCA 90 bp ATCTCGTTTGTTCATTTCCTGTCCATATTTCTAATCTCCCTAGGTTaGTCTGTACTACGTCTCTTGCTTACTGGTGTTTATAACACCATC +
Preference number: 5 (lower is better)
Translates to: ISFVHFLSIFLISLG*SVLRLLLTGVYNTI
Trigger: GATGGTGTTATAAACACCAGTAAGCAAGAGACGTAGTACAGAGCAACCTAGGGAGATTAGAAATATGGACAGGAAATGAACAAACGAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504965.1
CDS-3UTR CAA 90 bp TTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCCAGAGCAAGGAAATCTaGTGCAGAATCAAAGGTTCT +
Preference number: 5 (lower is better)
Translates to: FFRSQPFGFAFLLKYRCTQSKEI*CRIKGS
Trigger: AGAACCTTTGATTCTGCACAAGATTTCCTTGCTCTG...GGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS-3UTR CAA 90 bp TTCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCTTAGATCACAACCGTTaGGATTCGCTTTCCTTCTTA +
Preference number: 5 (lower is better)
Translates to: FFRSQPFGFAFLLKYRCTLDHNR*DSLSFL
Trigger: TAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAA...GGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
CDS-3UTR CAA 90 bp TCTTTAGATCACAACCGTTTGGATTCGCTTTCCTTCTTAAATATCGGTGTACCATATCGGTGTACCATTTaGGCTTCAAAACAATCTCTT +
Preference number: 5 (lower is better)
Translates to: SLDHNRLDSLSFLNIGVPYRCTI*ASKQSL
Trigger: AAGAGATTGTTTTGAAGCCAAAATGGTACACCGATA...TGGTACACCGATATTTAAGAAGGAAAGCGAATCCAAACGGTTGTGATCTAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
CDS-3UTR CAA 90 bp AGAAAACAAAGCAATATTCGTAAAGCTAGGCAAGCGAGCGTAACATTGGAGAAAACTCAAAACACAGTTTaGTTCACGGTTCAAACCAAA +
Preference number: 5 (lower is better)
Translates to: RKQSNIRKARQASVTLEKTQNTV*FTVQTK
Trigger: TTTGGTTTGAACCGTGAACAAAACTGTGTTTTGAGT...TTTCTCCAATGTTACGCTCGCTTGCCTAGCTTTACGAATATTGCTTTGTTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS GCA 72 bp AGCGCACAGCGCCCCGAGATCAGGTGGAGTGAATGGTaGGCTGGCCGCGCCGCCGCCTCCGCCCGCCTCCGC +
Preference number: 6 (lower is better)
Translates to: SAQRPEIRWSEW*AGRAAASARLR
Trigger: GCGGAGGCGGGCGGAGGCGGCGGCGCGGCCAGCGCACCATTCACTCCACCTGATCTCGGGGCGCTGTGCGCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398514.7
ENST00000512722.1
CDS CCA 72 bp ATCCCGGGCCGACTCCCCGATCCTCGGTCGCTGCCCTaGCCGCTCCGAGGAGTCTTCGCGCCCCGCTGCCCC +
Preference number: 6 (lower is better)
Translates to: IPGRLPDPRSLP*PLRGVFAPRCP
Trigger: GGGGCAGCGGGGCGCGAAGACTCCTCGGAGCGGCCAGGGCAGCGACCGAGGATCGGGGAGTCGGCCCGGGAT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343218.10
CDS CCA 72 bp CGCGCCTTCCTCAGCGCACAGCGCCCCGAGATCAGGTaGAGTGAATGGTGCGCTGGCCGCGCCGCCGCCTCC +
Preference number: 6 (lower is better)
Translates to: RAFLSAQRPEIR*SEWCAGRAAAS
Trigger: GGAGGCGGCGGCGCGGCCAGCGCACCATTCACTCCACCTGATCTCGGGGCGCTGTGCGCTGAGGAAGGCGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398514.7
ENST00000512722.1
CDS GCA 72 bp GGTGGCTGCAGCGGCTGGCTCCCTCCCTCCTTCTTCTaGTCCGGCTCGCCCGCGCCTTCCTCAGCGCACAGC +
Preference number: 6 (lower is better)
Translates to: GGCSGWLPPSFF*SGSPAPSSAHS
Trigger: GCTGTGCGCTGAGGAAGGCGCGGGCGAGCCGGAGCAGAAGAAGGAGGGAGGGAGCCAGCCGCTGCAGCCACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398514.7
ENST00000507309.5
ENST00000512722.1
CDS CCA 72 bp GGCTCCCGCGGCGGCTTCCCCGCCCTAGTTTCAGAATaGAGACGGTTCCCGGCTTCCCTCCCGGCACCCGCT +
Preference number: 6 (lower is better)
Translates to: GSRGGFPALVSE*RRFPASLPAPA
Trigger: AGCGGGTGCCGGGAGGGAAGCCGGGAACCGTCTCCATTCTGAAACTAGGGCGGGGAAGCCGCCGCGGGAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512722.1
CDS CAA 90 bp CCTGAGCCTTCGCGCCAGAGGCGGCAGTGCTGCTCCGATTCCTGCTaGTCCCTAGCGAGCCAGCGAGCCACACAGCCAGCTAGCGCGCGG +
Preference number: 6 (lower is better)
Translates to: PEPSRQRRQCCSDSC*SLASQRATQPASAR
Trigger: CCGCGCGCTAGCTGGCTGTGTGGCTCGCTGGCTCGCTAGGGACAAGCAGGAATCGGAGCAGCACTGCCGCCTCTGGCGCGAAGGCTCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343218.10
CDS GCA 72 bp CTGCCCTGGCCGCTCCGAGGAGTCTTCGCGCCCCGCTaGCCCACGCTGAGGGCATCGAAATCCAGCGTCTTG +
Preference number: 6 (lower is better)
Translates to: LPWPLRGVFAPR*PTLRASKSSVL
Trigger: CAAGACGCTGGATTTCGATGCCCTCAGCGTGGGGCAGCGGGGCGCGAAGACTCCTCGGAGCGGCCAGGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343218.10
CDS GCA 72 bp GAGGCGCCTGAGCCTTCGCGCCAGAGGCGGCAGTGCTaGTCCGATTCCTGCTTGTCCCTAGCGAGCCAGCGA +
Preference number: 6 (lower is better)
Translates to: EAPEPSRQRRQC*SDSCLSLASQR
Trigger: TCGCTGGCTCGCTAGGGACAAGCAGGAATCGGAGCAGCACTGCCGCCTCTGGCGCGAAGGCTCAGGCGCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343218.10
CDS GCA 72 bp GAGGAGGCGCCTGAGCCTTCGCGCCAGAGGCGGCAGTaGTGCTCCGATTCCTGCTTGTCCCTAGCGAGCCAG +
Preference number: 6 (lower is better)
Translates to: EEAPEPSRQRRQ*CSDSCLSLASQ
Trigger: CTGGCTCGCTAGGGACAAGCAGGAATCGGAGCAGCACTGCCGCCTCTGGCGCGAAGGCTCAGGCGCCTCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343218.10
CDS GCA 72 bp CCTTCGCGCCAGAGGCGGCAGTGCTGCTCCGATTCCTaGTTGTCCCTAGCGAGCCAGCGAGCCACACAGCCA +
Preference number: 6 (lower is better)
Translates to: PSRQRRQCCSDS*LSLASQRATQP
Trigger: TGGCTGTGTGGCTCGCTGGCTCGCTAGGGACAAGCAGGAATCGGAGCAGCACTGCCGCCTCTGGCGCGAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343218.10
CDS GCA 72 bp TCTTGTCCTTGGGGCCGAGGTTCTGCAACACCTCTTTaGCGGTGGCGCTCCGGATCTCTACCCCGGCGGGGG +
Preference number: 6 (lower is better)
Translates to: SCPWGRGSATPL*RWRSGSLPRRG
Trigger: CCCCCGCCGGGGTAGAGATCCGGAGCGCCACCGGCAAAGAGGTGTTGCAGAACCTCGGCCCCAAGGACAAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343218.10
CDS CAA 72 bp TCGCGCCAGAGGCGGCAGTGCTGCTCCGATTCCTGCTaGTCCCTAGCGAGCCAGCGAGCCACACAGCCAGCT +
Preference number: 6 (lower is better)
Translates to: SRQRRQCCSDSC*SLASQRATQPA
Trigger: AGCTGGCTGTGTGGCTCGCTGGCTCGCTAGGGACAAGCAGGAATCGGAGCAGCACTGCCGCCTCTGGCGCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343218.10
CDS CCA 72 bp GAGCAGAGCCTGCGGGGGTGCCACCTTTGGGGGTGGTaGTCAGGTCAAACACAGGCCCATCGTACATGCCCC +
Preference number: 6 (lower is better)
Translates to: EQSLRGCHLWGW*SGQTQAHRTCP
Trigger: GGGGCATGTACGATGGGCCTGTGTTTGACCTGACCACCACCCCCAAAGGTGGCACCCCCGCAGGCTCTGCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000520473.1
CDS CAA 90 bp GATAAGGAGACGGTCACTCGTGATCCGCGGGATGTTCTTCTTGCCTaGGTAGGACATGGTGGCGGTGGTGGCTGCAGCGGCTGGCTCCCT +
Preference number: 6 (lower is better)
Translates to: DKETVTRDPRDVLLA*VGHGGGGGCSGWLP
Trigger: AGGGAGCCAGCCGCTGCAGCCACCACCGCCACCATGTCCTACCAAGGCAAGAAGAACATCCCGCGGATCACGAGTGACCGTCTCCTTATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398514.7
ENST00000512722.1
ENST00000519672.1
CDS GCA 72 bp AGGAGACGGTCACTCTTGTCCTTGGGGCCGAGGTTCTaGAACACCTCTTTGCCGGTGGCGCTCCGGATCTCT +
Preference number: 6 (lower is better)
Translates to: RRRSLLSLGPRF*NTSLPVALRIS
Trigger: AGAGATCCGGAGCGCCACCGGCAAAGAGGTGTTGCAGAACCTCGGCCCCAAGGACAAGAGTGACCGTCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343218.10
CDS GCA 72 bp GGGTGGTGGTCAGGTCAAACACAGGCCCATCGTACATaGCCCTTGGGACGGCATGCAGGTCTGCCATCTTCC +
Preference number: 6 (lower is better)
Translates to: GWWSGQTQAHRT*PLGRHAGLPSS
Trigger: GGAAGATGGCAGACCTGCATGCCGTCCCAAGGGGCATGTACGATGGGCCTGTGTTTGACCTGACCACCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000507309.5
CDS CCA 72 bp GGTCAGGTCAAACACAGGCCCATCGTACATGCCCCTTaGGACGGCATGCAGGTCTGCCATCTTCCTCCGTGC +
Preference number: 6 (lower is better)
Translates to: GQVKHRPIVHAP*DGMQVCHLPPC
Trigger: GCACGGAGGAAGATGGCAGACCTGCATGCCGTCCCAAGGGGCATGTACGATGGGCCTGTGTTTGACCTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000507309.5
CDS CCA 72 bp GGATGTTCTTCTTGCCTTGGTAGGACATGGTGGCGGTaGTGGCTGCAGCGGCTGGCTCCCTCCCTCCTTCTT +
Preference number: 6 (lower is better)
Translates to: GCSSCLGRTWWR*WLQRLAPSLLL
Trigger: AAGAAGGAGGGAGGGAGCCAGCCGCTGCAGCCACCACCGCCACCATGTCCTACCAAGGCAAGAAGAACATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398514.7
ENST00000512722.1
ENST00000519672.1
CDS CAA 72 bp TGGTCAGGTCAAACACAGGCCCATCGTACATGCCCCTaGGGACGGCATGCAGGTCTGCCATCTTCCTCCGTG +
Preference number: 6 (lower is better)
Translates to: WSGQTQAHRTCP*GRHAGLPSSSV
Trigger: CACGGAGGAAGATGGCAGACCTGCATGCCGTCCCAAGGGGCATGTACGATGGGCCTGTGTTTGACCTGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000507309.5
CDS GCA 72 bp AACACAGGCCCATCGTACATGCCCCTTGGGACGGCATaGAGGTCTGCCATCTTCCTCCGTGCTTTAATGCGC +
Preference number: 6 (lower is better)
Translates to: NTGPSYMPLGTA*RSAIFLRALMR
Trigger: GCGCATTAAAGCACGGAGGAAGATGGCAGACCTGCATGCCGTCCCAAGGGGCATGTACGATGGGCCTGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343218.10
ENST00000398514.7
ENST00000507309.5
CDS GCA 72 bp AACACAGGCCCATCGTACATGCCCCTTGGGACGGCATaGAGGTCTGCCATAGACTGGTGGTTCTTGGCAGAG +
Preference number: 6 (lower is better)
Translates to: NTGPSYMPLGTA*RSAIDWWFLAE
Trigger: CTCTGCCAAGAACCACCAGTCTATGGCAGACCTGCATGCCGTCCCAAGGGGCATGTACGATGGGCCTGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520473.1
CDS CCA 72 bp GGTCAGGTCAAACACAGGCCCATCGTACATGCCCCTTaGGACGGCATGCAGGTCTGCCATAGACTGGTGGTT +
Preference number: 6 (lower is better)
Translates to: GQVKHRPIVHAP*DGMQVCHRLVV
Trigger: AACCACCAGTCTATGGCAGACCTGCATGCCGTCCCAAGGGGCATGTACGATGGGCCTGTGTTTGACCTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520473.1
CDS CAA 72 bp GGGACGGCATGCAGGTCTGCCATAGACTGGTGGTTCTaGGCAGAGACGATCTTCACAGCATCTGGATCCCAG +
Preference number: 6 (lower is better)
Translates to: GTACRSAIDWWF*AETIFTASGSQ
Trigger: CTGGGATCCAGATGCTGTGAAGATCGTCTCTGCCAAGAACCACCAGTCTATGGCAGACCTGCATGCCGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520473.1
CDS CCA 72 bp TTCCAGCTCTTCTGGCCTGCTCAGTACATGGCCTTCTaGGCCAGTTATCCCCATTTCCAACATGCGGGTTTG +
Preference number: 6 (lower is better)
Translates to: FQLFWPAQYMAF*ASYPHFQHAGL
Trigger: CAAACCCGCATGTTGGAAATGGGGATAACTGGCCCAGAAGGCCATGTACTGAGCAGGCCAGAAGAGCTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS CCA 72 bp CCAGGAGTCAATAGAAACATGAACCTCTCAAACTGGTaGCTCCCACCTCCACGAACTGTGAGGATGCAGTGC +
Preference number: 6 (lower is better)
Translates to: PGVNRNMNLSNW*LPPPRTVRMQC
Trigger: GCACTGCATCCTCACAGTTCGTGGAGGTGGGAGCCACCAGTTTGAGAGGTTCATGTTTCTATTGACTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508042.1
CDS GCA 72 bp TGGTGGCTCCCACCTCCACGAACTGTGAGGATGCAGTaGTGCACAAAGGTTATGGATAATTTTGGCAGGATC +
Preference number: 6 (lower is better)
Translates to: WWLPPPRTVRMQ*CTKVMDNFGRI
Trigger: GATCCTGCCAAAATTATCCATAACCTTTGTGCAGCACTGCATCCTCACAGTTCGTGGAGGTGGGAGCCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508042.1
CDS CCA 72 bp TCTCCAGGAGTCAATAGAAACATGAACCTCTCAAACTaGTGGCTCCCACCTCCACGAACTGTGAGGATGCAG +
Preference number: 6 (lower is better)
Translates to: SPGVNRNMNLSN*WLPPPRTVRMQ
Trigger: CTGCATCCTCACAGTTCGTGGAGGTGGGAGCCACCAGTTTGAGAGGTTCATGTTTCTATTGACTCCTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508042.1
CDS TCA 72 bp ACCTCTCAAACTGGTGGCTCCCACCTCCACGAACTGTaGGGATGCAGTGCTGCACAAAGGTTATGGATAATT +
Preference number: 6 (lower is better)
Translates to: TSQTGGSHLHEL*GCSAAQRLWII
Trigger: AATTATCCATAACCTTTGTGCAGCACTGCATCCTCACAGTTCGTGGAGGTGGGAGCCACCAGTTTGAGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508042.1
CDS GCA 72 bp ATGAAGGAGTTAACCCCTTTGTCCTTGATGAGGTTCTaGACTTCCTGCTTGACGCTGTCATTCCAGTGGGTG +
Preference number: 6 (lower is better)
Translates to: MKELTPLSLMRF*TSCLTLSFQWV
Trigger: CACCCACTGGAATGACAGCGTCAAGCAGGAAGTGCAGAACCTCATCAAGGACAAAGGGGTTAACTCCTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343218.10
ENST00000398514.7
CDS TCA 72 bp TTCCTTAGCCTCTGTGGTTATCACAAAGGTGACATCTaGATGAAAGCCTTTGCTCCTCAATCTTCTCAGGAC +
Preference number: 6 (lower is better)
Translates to: FLSLCGYHKGDI*MKAFAPQSSQD
Trigger: GTCCTGAGAAGATTGAGGAGCAAAGGCTTTCATTCAGATGTCACCTTTGTGATAACCACAGAGGCTAAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508042.1
CDS CCA 72 bp GAAATGCATCTGAAGCTCATCTCTGCAACATCTTCCTaGAGCTTGTACCATGCCATTTTTCATTCTTGTCAA +
Preference number: 6 (lower is better)
Translates to: EMHLKLISATSS*SLYHAIFHSCQ
Trigger: TTGACAAGAATGAAAAATGGCATGGTACAAGCTCCAGGAAGATGTTGCAGAGATGAGCTTCAGATGCATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504965.1
CDS TCA 72 bp ATGGCCTCTTTCCAAGCCATTAATAACAACGCAAAATaGAATGCATCTGAAGCTCATCTCTGCAACATCTTC +
Preference number: 6 (lower is better)
Translates to: MASFQAINNNAK*NASEAHLCNIF
Trigger: GAAGATGTTGCAGAGATGAGCTTCAGATGCATTTCATTTTGCGTTGTTATTAATGGCTTGGAAAGAGGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504965.1
CDS GCA 72 bp GTTCATTTCCTGTCCATATTTCTAATCTCCCTAGGTTaGTCTGTACTACGTCTCTTGCTTACTGGTGTTTAT +
Preference number: 6 (lower is better)
Translates to: VHFLSIFLISLG*SVLRLLLTGVY
Trigger: ATAAACACCAGTAAGCAAGAGACGTAGTACAGAGCAACCTAGGGAGATTAGAAATATGGACAGGAAATGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504965.1
CDS CAA 72 bp TTTCTAATCTCCCTAGGTTGCTCTGTACTACGTCTCTaGCTTACTGGTGTTTATAACACCATCCTATTTACC +
Preference number: 6 (lower is better)
Translates to: FLISLGCSVLRL*LTGVYNTILFT
Trigger: GGTAAATAGGATGGTGTTATAAACACCAGTAAGCAAGAGACGTAGTACAGAGCAACCTAGGGAGATTAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504965.1
CDS CAA 72 bp TGTTCATTTCCTGTCCATATTTCTAATCTCCCTAGGTaGCTCTGTACTACGTCTCTTGCTTACTGGTGTTTA +
Preference number: 6 (lower is better)
Translates to: CSFPVHISNLPR*LCTTSLAYWCL
Trigger: TAAACACCAGTAAGCAAGAGACGTAGTACAGAGCAACCTAGGGAGATTAGAAATATGGACAGGAAATGAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504965.1
CDS GCA 72 bp ACTGGTGTTTATAACACCATCCTATTTACCCTCATCTaGAGACATAATTACCATAATAGGTTTATGGCCTCT +
Preference number: 6 (lower is better)
Translates to: TGVYNTILFTLI*RHNYHNRFMAS
Trigger: AGAGGCCATAAACCTATTATGGTAATTATGTCTGCAGATGAGGGTAAATAGGATGGTGTTATAAACACCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504965.1
CDS CCA 72 bp CCCTCATCTGCAGACATAATTACCATAATAGGTTTATaGCCTCTTTCCAAGCCATTAATAACAACGCAAAAT +
Preference number: 6 (lower is better)
Translates to: PSSADIITIIGL*PLSKPLITTQN
Trigger: ATTTTGCGTTGTTATTAATGGCTTGGAAAGAGGCCATAAACCTATTATGGTAATTATGTCTGCAGATGAGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504965.1