Pregenerated sensors for DPY19L1 (Homo sapiens)
Ensembl gene IDs: ENSG00000173852Ensembl transcript IDs: ENST00000310974.8, ENST00000638088.2
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TTGCAGCTGACTTATGTCAGCAAGCTGCTGCTTCCCCGGGACCAGGCCTGCCCTAGCGGCTTCCAGGAGTaGGCACCAGAAACCATGCCT | + |
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Preference number: 2 (lower is better) Translates to: LQLTYVSKLLLPRDQACPSGFQE*APETMP Trigger: AGGCATGGTTTCTGGTGCCCACTCCTGGAAGCCGCT...AGGGCAGGCCTGGTCCCGGGGAAGCAGCAGCTTGCTGACATAAGTCAGCTGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000310974.8 ENST00000638088.2 |
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| 3UTR-3UTR CAA 90 bp | TTGCAGCTGACTTATGTCAGCAAGCTGCTGCTTCCCCGGGACCAGGCCTGCCCTATTTTCATGTCATCCTaGTCACAACCCACTGTGTTT | + |
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Preference number: 3 (lower is better) Translates to: LQLTYVSKLLLPRDQACPIFMSS*SQPTVF Trigger: AAACACAGTGGGTTGTGACAAGGATGACATGAAAAT...AGGGCAGGCCTGGTCCCGGGGAAGCAGCAGCTTGCTGACATAAGTCAGCTGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000310974.8 ENST00000638088.2 |
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| CDS-3UTR TCA 90 bp | TTGCAGCTGACTTATGTCAGCAAGCTGCTGCTTCCCCGGGACCAGGCCTGCCCTCCTCAGCGGCGACTGTaGGGCGCGGGGTGGCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: LQLTYVSKLLLPRDQACPPQRRL*GAGWLG Trigger: CCCCAGCCACCCCGCGCCTCACAGTCGCCGCTGAGG...AGGGCAGGCCTGGTCCCGGGGAAGCAGCAGCTTGCTGACATAAGTCAGCTGCAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000638088.2 |
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| CDS-3UTR CCA 90 bp | TTGCAGCTGACTTATGTCAGCAAGCTGCTGCTTCCCCGGGACCAGGCCTGCCCTGAACGGCGGGCTGGCTaGGCGGCTGGGCGCAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: LQLTYVSKLLLPRDQACPERRAG*AAGRSS Trigger: TGAGCTGCGCCCAGCCGCCCAGCCAGCCCGCCGTTC...AGGGCAGGCCTGGTCCCGGGGAAGCAGCAGCTTGCTGACATAAGTCAGCTGCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638088.2 |
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| CDS-3UTR CCA 90 bp | TTGCAGCTGACTTATGTCAGCAAGCTGCTGCTTCCCCGGGACCAGGCCTGCCCTGTGGCTGGGGCGGCTTaGGAGCCGCCTCCCGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: LQLTYVSKLLLPRDQACPVAGAA*EPPPGA Trigger: AGCACCGGGAGGCGGCTCCCAAGCCGCCCCAGCCAC...AGGGCAGGCCTGGTCCCGGGGAAGCAGCAGCTTGCTGACATAAGTCAGCTGCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000638088.2 |
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| CDS-3UTR GCA 90 bp | TTGCAGCTGACTTATGTCAGCAAGCTGCTGCTTCCCCGGGACCAGGCCTGCCCTGGAGCCGCCTCCCGGTaGTTGTTCCGCGCCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: LQLTYVSKLLLPRDQACPGAASR*LFRACR Trigger: CCTGCAGGCGCGGAACAAGCACCGGGAGGCGGCTCC...AGGGCAGGCCTGGTCCCGGGGAAGCAGCAGCTTGCTGACATAAGTCAGCTGCAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638088.2 |
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| CDS-3UTR CCA 90 bp | TTGCAGCTGACTTATGTCAGCAAGCTGCTGCTTCCCCGGGACCAGGCCTGCCCTCAGCTAACAGGAGCGTaGTCCAGGTCCGGCCGCGCC | + |
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Preference number: 4 (lower is better) Translates to: LQLTYVSKLLLPRDQACPQLTGA*SRSGRA Trigger: GGCGCGGCCGGACCTGGACCACGCTCCTGTTAGCTG...AGGGCAGGCCTGGTCCCGGGGAAGCAGCAGCTTGCTGACATAAGTCAGCTGCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638088.2 |
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| CDS-3UTR GCA 90 bp | TTGCAGCTGACTTATGTCAGCAAGCTGCTGCTTCCCCGGGACCAGGCCTGCCCTCCCCGGGACCAGGCCTaGCCTTGGGCTCTGGTAAGA | + |
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Preference number: 4 (lower is better) Translates to: LQLTYVSKLLLPRDQACPPRDQA*PWALVR Trigger: TCTTACCAGAGCCCAAGGGCAGGCCTGGTCCCGGGG...AGGGCAGGCCTGGTCCCGGGGAAGCAGCAGCTTGCTGACATAAGTCAGCTGCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000310974.8 ENST00000638088.2 |
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| CDS-3UTR GCA 90 bp | TTGCAGCTGACTTATGTCAGCAAGCTGCTGCTTCCCCGGGACCAGGCCTGCCCTAGCATCCCTGGGAGCTaGGGCTCTAGGCGCTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: LQLTYVSKLLLPRDQACPSIPGS*GSRRWH Trigger: GTGCCAGCGCCTAGAGCCGCAGCTCCCAGGGATGCT...AGGGCAGGCCTGGTCCCGGGGAAGCAGCAGCTTGCTGACATAAGTCAGCTGCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000310974.8 ENST00000638088.2 |
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| CDS-3UTR CCA 90 bp | TTGCAGCTGACTTATGTCAGCAAGCTGCTGCTTCCCCGGGACCAGGCCTGCCCTCCTGCAGGACCATCTTaGCATAGTCGCGCCCGCTCG | + |
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Preference number: 4 (lower is better) Translates to: LQLTYVSKLLLPRDQACPPAGPS*HSRARS Trigger: CGAGCGGGCGCGACTATGCCAAGATGGTCCTGCAGG...AGGGCAGGCCTGGTCCCGGGGAAGCAGCAGCTTGCTGACATAAGTCAGCTGCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638088.2 |
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| CDS-3UTR TCA 90 bp | TTGCAGCTGACTTATGTCAGCAAGCTGCTGCTTCCCCGGGACCAGGCCTGCCCTTCGGGATCGGGGCGCTaGTTCAAGTTTCGGAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: LQLTYVSKLLLPRDQACPSGSGR*FKFRSL Trigger: CAGGCTCCGAAACTTGAATCAGCGCCCCGATCCCGA...AGGGCAGGCCTGGTCCCGGGGAAGCAGCAGCTTGCTGACATAAGTCAGCTGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310974.8 |
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| CDS-3UTR GCA 90 bp | TTGCAGCTGACTTATGTCAGCAAGCTGCTGCTTCCCCGGGACCAGGCCTGCCCTATGTCAGCAAGCTGCTaGTTCCCCGGGACCAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: LQLTYVSKLLLPRDQACPMSASC*FPGTRP Trigger: AGGCCTGGTCCCGGGGAAGCAGCAGCTTGCTGACAT...AGGGCAGGCCTGGTCCCGGGGAAGCAGCAGCTTGCTGACATAAGTCAGCTGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000310974.8 ENST00000638088.2 |
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| CDS-3UTR TCA 90 bp | TTGCAGCTGACTTATGTCAGCAAGCTGCTGCTTCCCCGGGACCAGGCCTGCCCTCTTCCATTGTGGGAGTaGTGGGGCCGAAGGAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: LQLTYVSKLLLPRDQACPLPLWE*WGRRKS Trigger: GCTCTTCCTTCGGCCCCATCACTCCCACAATGGAAG...AGGGCAGGCCTGGTCCCGGGGAAGCAGCAGCTTGCTGACATAAGTCAGCTGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310974.8 |
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| CDS-3UTR GCA 90 bp | TTGCAGCTGACTTATGTCAGCAAGCTGCTGCTTCCCCGGGACCAGGCCTGCCCTCTTATGTCAGCAAGCTaGTGCTTCCCCGGGACCAGG | + |
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Preference number: 4 (lower is better) Translates to: LQLTYVSKLLLPRDQACPLMSAS*CFPGTR Trigger: CCTGGTCCCGGGGAAGCAGCAGCTTGCTGACATAAG...AGGGCAGGCCTGGTCCCGGGGAAGCAGCAGCTTGCTGACATAAGTCAGCTGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000310974.8 ENST00000638088.2 |
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| CDS-3UTR CCA 90 bp | TTGCAGCTGACTTATGTCAGCAAGCTGCTGCTTCCCCGGGACCAGGCCTGCCCTTTGCCATCGTGGGCATaGCACCCGCAAACACTGCAT | + |
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Preference number: 4 (lower is better) Translates to: LQLTYVSKLLLPRDQACPLPSWA*HPQTLH Trigger: ATGCAGTGTTTGCGGGTGCCATGCCCACGATGGCAA...AGGGCAGGCCTGGTCCCGGGGAAGCAGCAGCTTGCTGACATAAGTCAGCTGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000310974.8 ENST00000638088.2 |
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| CDS-3UTR TCA 90 bp | TTGCAGCTGACTTATGTCAGCAAGCTGCTGCTTCCCCGGGACCAGGCCTGCCCTCTCAGCCTTTGCAGCTaGCTTATGTCAGCAAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: LQLTYVSKLLLPRDQACPLSLCS*LMSASC Trigger: GCAGCTTGCTGACATAAGTCAGCTGCAAAGGCTGAG...AGGGCAGGCCTGGTCCCGGGGAAGCAGCAGCTTGCTGACATAAGTCAGCTGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000310974.8 ENST00000638088.2 |
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| CDS-3UTR GCA 90 bp | TTGCAGCTGACTTATGTCAGCAAGCTGCTGCTTCCCCGGGACCAGGCCTGCCCTCCAGTGCAACACTGCTaGAAAAACAGCTCTTCGGCG | + |
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Preference number: 4 (lower is better) Translates to: LQLTYVSKLLLPRDQACPPVQHC*KNSSSA Trigger: CGCCGAAGAGCTGTTTTTGCAGCAGTGTTGCACTGG...AGGGCAGGCCTGGTCCCGGGGAAGCAGCAGCTTGCTGACATAAGTCAGCTGCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000310974.8 |
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| CDS-3UTR GCA 90 bp | TTGCAGCTGACTTATGTCAGCAAGCTGCTGCTTCCCCGGGACCAGGCCTGCCCTGCTCCAGTGCAACACTaGTGCAAAAACAGCTCTTCG | + |
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Preference number: 4 (lower is better) Translates to: LQLTYVSKLLLPRDQACPAPVQH*CKNSSS Trigger: CGAAGAGCTGTTTTTGCAGCAGTGTTGCACTGGAGC...AGGGCAGGCCTGGTCCCGGGGAAGCAGCAGCTTGCTGACATAAGTCAGCTGCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000310974.8 |
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| CDS-3UTR GCA 90 bp | TTGCAGCTGACTTATGTCAGCAAGCTGCTGCTTCCCCGGGACCAGGCCTGCCCTGGCACCCGCAAACACTaGATCTGGTTTAGTACTATA | + |
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Preference number: 4 (lower is better) Translates to: LQLTYVSKLLLPRDQACPGTRKH*IWFSTI Trigger: TATAGTACTAAACCAGATGCAGTGTTTGCGGGTGCC...AGGGCAGGCCTGGTCCCGGGGAAGCAGCAGCTTGCTGACATAAGTCAGCTGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000310974.8 ENST00000638088.2 |
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| CDS-3UTR CCA 90 bp | TTGCAGCTGACTTATGTCAGCAAGCTGCTGCTTCCCCGGGACCAGGCCTGCCCTAAGAGGTGTGTTATATaGCTCCAGTGCAACACTGCT | + |
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Preference number: 4 (lower is better) Translates to: LQLTYVSKLLLPRDQACPKRCVI*LQCNTA Trigger: AGCAGTGTTGCACTGGAGCCATATAACACACCTCTT...AGGGCAGGCCTGGTCCCGGGGAAGCAGCAGCTTGCTGACATAAGTCAGCTGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000310974.8 ENST00000638088.2 |
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| CDS-3UTR CCA 90 bp | TTGCAGCTGACTTATGTCAGCAAGCTGCTGCTTCCCCGGGACCAGGCCTGCCCTTACTGCAACCAGGCTTaGATCTTCTTACACACCATG | + |
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Preference number: 4 (lower is better) Translates to: LQLTYVSKLLLPRDQACPYCNQA*IFLHTM Trigger: CATGGTGTGTAAGAAGATCCAAGCCTGGTTGCAGTA...AGGGCAGGCCTGGTCCCGGGGAAGCAGCAGCTTGCTGACATAAGTCAGCTGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000310974.8 ENST00000638088.2 |
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| CDS-3UTR CCA 90 bp | TTGCAGCTGACTTATGTCAGCAAGCTGCTGCTTCCCCGGGACCAGGCCTGCCCTTGTTTTGTACGCCTATaGAACCTGCTACCAATCTGC | + |
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Preference number: 4 (lower is better) Translates to: LQLTYVSKLLLPRDQACPCFVRL*NLLPIC Trigger: GCAGATTGGTAGCAGGTTCCATAGGCGTACAAAACA...AGGGCAGGCCTGGTCCCGGGGAAGCAGCAGCTTGCTGACATAAGTCAGCTGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000310974.8 ENST00000638088.2 |
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| CDS-3UTR GCA 90 bp | TTGCAGCTGACTTATGTCAGCAAGCTGCTGCTTCCCCGGGACCAGGCCTGCCCTGTTATATGGCTCCAGTaGAACACTGCTGCAAAAACA | + |
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Preference number: 4 (lower is better) Translates to: LQLTYVSKLLLPRDQACPVIWLQ*NTAAKT Trigger: TGTTTTTGCAGCAGTGTTGCACTGGAGCCATATAAC...AGGGCAGGCCTGGTCCCGGGGAAGCAGCAGCTTGCTGACATAAGTCAGCTGCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000310974.8 ENST00000638088.2 |
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| CDS-3UTR GCA 90 bp | TTGCAGCTGACTTATGTCAGCAAGCTGCTGCTTCCCCGGGACCAGGCCTGCCCTAAATTTCAGGCATACTaGAACCAGGCTTGGATCTTC | + |
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Preference number: 4 (lower is better) Translates to: LQLTYVSKLLLPRDQACPKFQAY*NQAWIF Trigger: GAAGATCCAAGCCTGGTTGCAGTATGCCTGAAATTT...AGGGCAGGCCTGGTCCCGGGGAAGCAGCAGCTTGCTGACATAAGTCAGCTGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000310974.8 ENST00000638088.2 |
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| CDS-3UTR CCA 90 bp | TTGCAGCTGACTTATGTCAGCAAGCTGCTGCTTCCCCGGGACCAGGCCTGCCCTATACTATTTTTGTTCTaGCTCTCAAGCCTGCGTCTT | + |
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Preference number: 4 (lower is better) Translates to: LQLTYVSKLLLPRDQACPILFLF*LSSLRL Trigger: AAGACGCAGGCTTGAGAGCCAGAACAAAAATAGTAT...AGGGCAGGCCTGGTCCCGGGGAAGCAGCAGCTTGCTGACATAAGTCAGCTGCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000310974.8 ENST00000638088.2 |
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| CDS-3UTR GCA 90 bp | TTGCAGCTGACTTATGTCAGCAAGCTGCTGCTTCCCCGGGACCAGGCCTGCCCTTTGATGTTAGTAAGTTaGCAATATGAGCGTCATCTG | + |
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Preference number: 4 (lower is better) Translates to: LQLTYVSKLLLPRDQACPLMLVS*QYERHL Trigger: CAGATGACGCTCATATTGGCAACTTACTAACATCAA...AGGGCAGGCCTGGTCCCGGGGAAGCAGCAGCTTGCTGACATAAGTCAGCTGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000310974.8 ENST00000638088.2 |
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| CDS-3UTR CCA 90 bp | TTGCAGCTGACTTATGTCAGCAAGCTGCTGCTTCCCCGGGACCAGGCCTGCCCTCCGTCCAACATATCTTaGTTTGAATACCAATCAAGT | + |
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Preference number: 4 (lower is better) Translates to: LQLTYVSKLLLPRDQACPPSNIS*FEYQSS Trigger: ACTTGATTGGTATTCAAACCAAGATATGTTGGACGG...AGGGCAGGCCTGGTCCCGGGGAAGCAGCAGCTTGCTGACATAAGTCAGCTGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000310974.8 ENST00000638088.2 |
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| CDS-3UTR CCA 90 bp | TTGCAGCTGACTTATGTCAGCAAGCTGCTGCTTCCCCGGGACCAGGCCTGCCCTCTTTGTGTATCTCAGTaGAGTCTCTTTTTCCATAAA | + |
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Preference number: 4 (lower is better) Translates to: LQLTYVSKLLLPRDQACPLCVSQ*SLFFHK Trigger: TTTATGGAAAAAGAGACTCCACTGAGATACACAAAG...AGGGCAGGCCTGGTCCCGGGGAAGCAGCAGCTTGCTGACATAAGTCAGCTGCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000310974.8 ENST00000638088.2 |
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| CDS-3UTR CCA 90 bp | TTGCAGCTGACTTATGTCAGCAAGCTGCTGCTTCCCCGGGACCAGGCCTGCCCTCGCAAACACTGCATCTaGTTTAGTACTATATTTGAT | + |
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Preference number: 4 (lower is better) Translates to: LQLTYVSKLLLPRDQACPRKHCI*FSTIFD Trigger: ATCAAATATAGTACTAAACCAGATGCAGTGTTTGCG...AGGGCAGGCCTGGTCCCGGGGAAGCAGCAGCTTGCTGACATAAGTCAGCTGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000310974.8 ENST00000638088.2 |
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| CDS GCA 90 bp | GTTCCGCGCCTGCAGGACCATCTTGGCATAGTCGCGCCCGCTCGCTaGGCGCGCCCGGACGGCGGCCAGAGAACGGCGGGCTGGCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: VPRLQDHLGIVAPAR*ARPDGGQRTAGWLG Trigger: GCCCAGCCAGCCCGCCGTTCTCTGGCCGCCGTCCGGGCGCGCGCAGCGAGCGGGCGCGACTATGCCAAGATGGTCCTGCAGGCGCGGAAC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638088.2 |
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| CDS CCA 90 bp | TGGGAGCCGCCTCCCGGTGCTTGTTCCGCGCCTGCAGGACCATCTTaGCATAGTCGCGCCCGCTCGCTGCGCGCGCCCGGACGGCGGCCA | + |
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Preference number: 5 (lower is better) Translates to: WEPPPGACSAPAGPS*HSRARSLRAPGRRP Trigger: TGGCCGCCGTCCGGGCGCGCGCAGCGAGCGGGCGCGACTATGCCAAGATGGTCCTGCAGGCGCGGAACAAGCACCGGGAGGCGGCTCCCA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638088.2 |
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| CDS-3UTR CAA 90 bp | TTGCAGCTGACTTATGTCAGCAAGCTGCTGCTTCCCCGGGACCAGGCCTGCCCTGCCGCCTCCCGGTGCTaGTTCCGCGCCTGCAGGACC | + |
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Preference number: 5 (lower is better) Translates to: LQLTYVSKLLLPRDQACPAASRC*FRACRT Trigger: GGTCCTGCAGGCGCGGAACAAGCACCGGGAGGCGGC...AGGGCAGGCCTGGTCCCGGGGAAGCAGCAGCTTGCTGACATAAGTCAGCTGCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638088.2 |
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| CDS TCA 90 bp | GGGAGTGATGGGGCCGAAGGAAGAGCCCTCTCGGGATCGGGGCGCTaGTTCAAGTTTCGGAGCCTGTTAAGGCTGCGCTTGGAGCCCGCG | + |
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Preference number: 5 (lower is better) Translates to: GSDGAEGRALSGSGR*FKFRSLLRLRLEPA Trigger: CGCGGGCTCCAAGCGCAGCCTTAACAGGCTCCGAAACTTGAATCAGCGCCCCGATCCCGAGAGGGCTCTTCCTTCGGCCCCATCACTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310974.8 |
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| CDS-3UTR CAA 90 bp | TTGCAGCTGACTTATGTCAGCAAGCTGCTGCTTCCCCGGGACCAGGCCTGCCCTCTGTTAAGGCTGCGCTaGGAGCCCGCGCAGGCGAGA | + |
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Preference number: 5 (lower is better) Translates to: LQLTYVSKLLLPRDQACPLLRLR*EPAQAR Trigger: TCTCGCCTGCGCGGGCTCCAAGCGCAGCCTTAACAG...AGGGCAGGCCTGGTCCCGGGGAAGCAGCAGCTTGCTGACATAAGTCAGCTGCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310974.8 |
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| CDS-3UTR CAA 90 bp | TTGCAGCTGACTTATGTCAGCAAGCTGCTGCTTCCCCGGGACCAGGCCTGCCCTGGACCAGGCCTGCCCTaGGGCTCTGGTAAGAAGGTA | + |
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Preference number: 5 (lower is better) Translates to: LQLTYVSKLLLPRDQACPGPGLP*GSGKKV Trigger: TACCTTCTTACCAGAGCCCAAGGGCAGGCCTGGTCC...AGGGCAGGCCTGGTCCCGGGGAAGCAGCAGCTTGCTGACATAAGTCAGCTGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000310974.8 ENST00000638088.2 |
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| CDS-3UTR CAA 90 bp | TTGCAGCTGACTTATGTCAGCAAGCTGCTGCTTCCCCGGGACCAGGCCTGCCCTCACACTCCTCAGCCTTaGCAGCTGACTTATGTCAGC | + |
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Preference number: 5 (lower is better) Translates to: LQLTYVSKLLLPRDQACPHTPQP*QLTYVS Trigger: GCTGACATAAGTCAGCTGCAAAGGCTGAGGAGTGTG...AGGGCAGGCCTGGTCCCGGGGAAGCAGCAGCTTGCTGACATAAGTCAGCTGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000310974.8 ENST00000638088.2 |
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| CDS-3UTR CAA 90 bp | TTGCAGCTGACTTATGTCAGCAAGCTGCTGCTTCCCCGGGACCAGGCCTGCCCTATACTGCAACCAGGCTaGGATCTTCTTACACACCAT | + |
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Preference number: 5 (lower is better) Translates to: LQLTYVSKLLLPRDQACPILQPG*DLLTHH Trigger: ATGGTGTGTAAGAAGATCCAAGCCTGGTTGCAGTAT...AGGGCAGGCCTGGTCCCGGGGAAGCAGCAGCTTGCTGACATAAGTCAGCTGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000310974.8 ENST00000638088.2 |
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| CDS GCA 72 bp | CTGCAGGACCATCTTGGCATAGTCGCGCCCGCTCGCTaGGCGCGCCCGGACGGCGGCCAGAGAACGGCGGGC | + |
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Preference number: 6 (lower is better) Translates to: LQDHLGIVAPAR*ARPDGGQRTAG Trigger: GCCCGCCGTTCTCTGGCCGCCGTCCGGGCGCGCGCAGCGAGCGGGCGCGACTATGCCAAGATGGTCCTGCAG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638088.2 |
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| CDS CCA 72 bp | CCTCCCGGTGCTTGTTCCGCGCCTGCAGGACCATCTTaGCATAGTCGCGCCCGCTCGCTGCGCGCGCCCGGA | + |
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Preference number: 6 (lower is better) Translates to: PPGACSAPAGPS*HSRARSLRAPG Trigger: TCCGGGCGCGCGCAGCGAGCGGGCGCGACTATGCCAAGATGGTCCTGCAGGCGCGGAACAAGCACCGGGAGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638088.2 |
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| CDS TCA 72 bp | GGCCTTCCGGAGGCGGCCGCCCTTCCATTGTGGGAGTaGTGGGGCCGAAGGAAGAGCCCTCTCGGGATCGGG | + |
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Preference number: 6 (lower is better) Translates to: GLPEAAALPLWE*WGRRKSPLGIG Trigger: CCCGATCCCGAGAGGGCTCTTCCTTCGGCCCCATCACTCCCACAATGGAAGGGCGGCCGCCTCCGGAAGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310974.8 |
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| CDS TCA 72 bp | GGGGCCGAAGGAAGAGCCCTCTCGGGATCGGGGCGCTaGTTCAAGTTTCGGAGCCTGTTAAGGCTGCGCTTG | + |
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Preference number: 6 (lower is better) Translates to: GAEGRALSGSGR*FKFRSLLRLRL Trigger: CAAGCGCAGCCTTAACAGGCTCCGAAACTTGAATCAGCGCCCCGATCCCGAGAGGGCTCTTCCTTCGGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310974.8 |
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