Pregenerated sensors for DPPA2 (Homo sapiens)
Ensembl gene IDs: ENSG00000163530Ensembl transcript IDs: ENST00000478945.1
Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
CDS TCA 90 bp | GCCCAGGCTGGTCTTGAATTCCTGGCTGAGTTCCCAGACTCAAGTTaGTCCTCCCTCCGCAGCCTTCGGAGTGGGTGGGACTACAGGCCT | + |
Preference number: 5 (lower is better) Translates to: AQAGLEFLAEFPDSS*SSLRSLRSGWDYRP Trigger: AGGCCTGTAGTCCCACCCACTCCGAAGGCTGCGGAGGGAGGATCAACTTGAGTCTGGGAACTCAGCCAGGAATTCAAGACCAGCCTGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478945.1 |
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CDS TCA 72 bp | GGTCTTGAATTCCTGGCTGAGTTCCCAGACTCAAGTTaGTCCTCCCTCCGCAGCCTTCGGAGTGGGTGGGAC | + |
Preference number: 6 (lower is better) Translates to: GLEFLAEFPDSS*SSLRSLRSGWD Trigger: GTCCCACCCACTCCGAAGGCTGCGGAGGGAGGATCAACTTGAGTCTGGGAACTCAGCCAGGAATTCAAGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478945.1 |
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CDS TCA 72 bp | CGCCACGCCCAGCCCTCCGGACGATTCTTAAGCTCCTaGAGTCTAGAAGCCTTAGCTAGATCAGGCCATAAA | + |
Preference number: 6 (lower is better) Translates to: RHAQPSGRFLSS*SLEALARSGHK Trigger: TTTATGGCCTGATCTAGCTAAGGCTTCTAGACTTCAGGAGCTTAAGAATCGTCCGGAGGGCTGGGCGTGGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478945.1 |