RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DPP8 (Homo sapiens)

Ensembl gene IDs: ENSG00000074603

Ensembl transcript IDs: ENST00000300141.11, ENST00000321147.10, ENST00000341861.9, ENST00000358939.8, ENST00000395652.7, ENST00000558363.1, ENST00000558529.1, ENST00000558559.1, ENST00000558786.5, ENST00000559233.5, ENST00000559526.5, ENST00000560194.1, ENST00000560436.1, ENST00000560597.1, ENST00000560665.1

Found 607 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGGCAGGACACCTGGCTGGAGTCCAGCACCAACTGGATACTAACTaGCTGTGTGGTCGTGGGTATATTTCCTCCTCTCTCTCTAGCATG +
Preference number: 1 (lower is better)
Translates to: EAGHLAGVQHQLDTN*LCGRGYISSSLSSM
Trigger: CATGCTAGAGAGAGAGGAGGAAATATACCCACGACCACACAGCCAGTTAGTATCCAGTTGGTGCTGGACTCCAGCCAGGTGTCCTGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
3UTR CCA 90 bp TTAACTACCATGAGGCAGGACACCTGGCTGGAGTCCAGCACCAACTaGATACTAACTGGCTGTGTGGTCGTGGGTATATTTCCTCCTCTC +
Preference number: 1 (lower is better)
Translates to: LTTMRQDTWLESSTN*ILTGCVVVGIFPPL
Trigger: GAGAGGAGGAAATATACCCACGACCACACAGCCAGTTAGTATCCAGTTGGTGCTGGACTCCAGCCAGGTGTCCTGCCTCATGGTAGTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
3UTR CCA 90 bp AATACCTTTCCCAACGACAGAACCACCATATCATCCTGCCATTTCTaGGCTTTCCCTACCTCCCACTTGGTGTCAATGAAGTCCACCTCT +
Preference number: 1 (lower is better)
Translates to: NTFPNDRTTISSCHF*AFPTSHLVSMKSTS
Trigger: AGAGGTGGACTTCATTGACACCAAGTGGGAGGTAGGGAAAGCCCAGAAATGGCAGGATGATATGGTGGTTCTGTCGTTGGGAAAGGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
3UTR TCA 90 bp ATCCTCCATAGGACCAGCCGTGGATGCCCACACGATCTAAGTCAATaGAATCATATCGAGAAGCTAGATATTGGAGTCCTTCCACCTGAT +
Preference number: 1 (lower is better)
Translates to: ILHRTSRGCPHDLSQ*NHIEKLDIGVLPPD
Trigger: ATCAGGTGGAAGGACTCCAATATCTAGCTTCTCGATATGATTTCATTGACTTAGATCGTGTGGGCATCCACGGCTGGTCCTATGGAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395652.7
3UTR CCA 90 bp AGAGCAGTAAACGATTTGGTTCAGAGGGGAACTTTTCTGCTTGCATaGCCACAGATCCTAAGTAATAGCCCTGTTCATTCTGGTCAGGGT +
Preference number: 1 (lower is better)
Translates to: RAVNDLVQRGTFLLA*PQILSNSPVHSGQG
Trigger: ACCCTGACCAGAATGAACAGGGCTATTACTTAGGATCTGTGGCCATGCAAGCAGAAAAGTTCCCCTCTGAACCAAATCGTTTACTGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395652.7
3UTR CCA 90 bp TTTACCTTTTCTATATATCATTTAACTACCATGAGGCAGGACACCTaGCTGGAGTCCAGCACCAACTGGATACTAACTGGCTGTGTGGTC +
Preference number: 1 (lower is better)
Translates to: FTFSIYHLTTMRQDT*LESSTNWILTGCVV
Trigger: GACCACACAGCCAGTTAGTATCCAGTTGGTGCTGGACTCCAGCCAGGTGTCCTGCCTCATGGTAGTTAAATGATATATAGAAAAGGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
3UTR GCA 90 bp TCAGCATGTCCAATAACACTGGCAAACACAGTAACTGCCTTACTGTaGAAAAGGAACATCGGATTCTCATCATTTCCCAAAGCAGCAGAA +
Preference number: 1 (lower is better)
Translates to: SACPITLANTVTALL*KRNIGFSSFPKAAE
Trigger: TTCTGCTGCTTTGGGAAATGATGAGAATCCGATGTTCCTTTTGCACAGTAAGGCAGTTACTGTGTTTGCCAGTGTTATTGGACATGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395652.7
3UTR GCA 90 bp CTATTTGACCTCAGCATGTCCAATAACACTGGCAAACACAGTAACTaGCTTACTGTGCAAAAGGAACATCGGATTCTCATCATTTCCCAA +
Preference number: 1 (lower is better)
Translates to: LFDLSMSNNTGKHSN*LTVQKEHRILIISQ
Trigger: TTGGGAAATGATGAGAATCCGATGTTCCTTTTGCACAGTAAGGCAGTTACTGTGTTTGCCAGTGTTATTGGACATGCTGAGGTCAAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395652.7
3UTR GCA 90 bp GCAAAAGATGCAGTTCATAATGTTCTCCCGATTCAGGAACTCTTATaGTGTGTCTCTCCTGAGGATAGATCTGTAAATCATATGGCTTTC +
Preference number: 1 (lower is better)
Translates to: AKDAVHNVLPIQELL*CVSPEDRSVNHMAF
Trigger: GAAAGCCATATGATTTACAGATCTATCCTCAGGAGAGACACAGCATAAGAGTTCCTGAATCGGGAGAACATTATGAACTGCATCTTTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395652.7
3UTR CCA 90 bp AGATGCCACTTTGAAGAAACAGCCTTAATGGGTGAGAGGTTTCAATaGAGTAGCTGCTTAAAAGCTACTGTATACCATTTCTACTTTGCA +
Preference number: 1 (lower is better)
Translates to: RCHFEETALMGERFQ*SSCLKATVYHFYFA
Trigger: TGCAAAGTAGAAATGGTATACAGTAGCTTTTAAGCAGCTACTCCATTGAAACCTCTCACCCATTAAGGCTGTTTCTTCAAAGTGGCATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
3UTR TCA 90 bp ACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTCTGTTaGTTAAACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAG +
Preference number: 1 (lower is better)
Translates to: TWQVSKCDDQFCVFC*LNLLIWLNSQCIPE
Trigger: CTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTTTAATCAACAGAAAACACAGAATTGATCATCACATTTTGATACCTGCCATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
3UTR TCA 90 bp AACTCTACATTTCTTTTAGAAGTATCCCAGATGAATCTTAGATTTTaGGTTCCACTACTCTGTAATGCTCAAGTAACTATCCCTCTGGAT +
Preference number: 1 (lower is better)
Translates to: NSTFLLEVSQMNLRF*VPLLCNAQVTIPLD
Trigger: ATCCAGAGGGATAGTTACTTGAGCATTACAGAGTAGTGGAACTCAAAATCTAAGATTCATCTGGGATACTTCTAAAAGAAATGTAGAGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
3UTR TCA 90 bp ACATACAAACACTACTTTTTCTTTATCTGTAAAGGACTTATGAAATaGTCACCTAGAGCCCAGGACCTTGCACTAACATCTCTATATTTG +
Preference number: 1 (lower is better)
Translates to: TYKHYFFFICKGLMK*SPRAQDLALTSLYL
Trigger: CAAATATAGAGATGTTAGTGCAAGGTCCTGGGCTCTAGGTGATCATTTCATAAGTCCTTTACAGATAAAGAAAAAGTAGTGTTTGTATGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
3UTR-3UTR TCA 90 bp ACTGGCTGTGTGGTCGTGGGTATATTTCCTCCTCTCTCTCTAGCATGTAGGTTGTCTCCTGACTTCAAGTaGTTCACCCGCCTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: TGCVVVGIFPPLSLACRLSPDFK*FTRLGL
Trigger: GAGGCCAAGGCGGGTGAATCACTTGAAGTCAGGAGA...CAACCTACATGCTAGAGAGAGAGGAGGAAATATACCCACGACCACACAGCCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
3UTR-3UTR CCA 90 bp TGTAAGAGCAGTAAACGATTTGGTTCAGAGGGGAACTTTTCTGCTTGCATGGCCGATCCACAGAGTGACTaGGGCCCCAGCAATAGCAAC +
Preference number: 2 (lower is better)
Translates to: CKSSKRFGSEGNFSACMADPQSD*GPSNSN
Trigger: GTTGCTATTGCTGGGGCCCCAGTCACTCTGTGGATC...GGCCATGCAAGCAGAAAAGTTCCCCTCTGAACCAAATCGTTTACTGCTCTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395652.7
3UTR-3UTR GCA 90 bp ACTGGCTGTGTGGTCGTGGGTATATTTCCTCCTCTCTCTCTAGCATGTAGGTTGCATCAAACTCATAGATaGCTTCCCTGCCACTGGTGT +
Preference number: 2 (lower is better)
Translates to: TGCVVVGIFPPLSLACRLHQTHR*LPCHWC
Trigger: ACACCAGTGGCAGGGAAGGCATCTATGAGTTTGATG...CAACCTACATGCTAGAGAGAGAGGAGGAAATATACCCACGACCACACAGCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
3UTR-3UTR TCA 90 bp TATAAAGATGGGCTCCCAGGCTTAAGCAAGCACTCTACTCTATATTCCAATCCTCTGGTCTTGATCTCCTaGCTTCAAGTGATTCACCCG +
Preference number: 2 (lower is better)
Translates to: YKDGLPGLSKHSTLYSNPLVLIS*LQVIHP
Trigger: CGGGTGAATCACTTGAAGTCAGGAGATCAAGACCAG...AGGATTGGAATATAGAGTAGAGTGCTTGCTTAAGCCTGGGAGCCCATCTTTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
3UTR-3UTR CCA 90 bp GACACACTCACCTTATATAGTTTAGAAATGGCCATGTCTCTTTTCTTACATCAAGGCAGGACACCTGGCTaGAGTCCAGCACCAACTGGA +
Preference number: 2 (lower is better)
Translates to: DTLTLYSLEMAMSLFLHQGRTPG*SPAPTG
Trigger: TCCAGTTGGTGCTGGACTCCAGCCAGGTGTCCTGCC...TTGATGTAAGAAAAGAGACATGGCCATTTCTAAACTATATAAGGTGAGTGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
3UTR-3UTR CCA 90 bp ACTGGCTGTGTGGTCGTGGGTATATTTCCTCCTCTCTCTCTAGCATGTAGGTTGGGGAAAATACTTTCTTaGGGAAGAAAGTTACCCAAA +
Preference number: 2 (lower is better)
Translates to: TGCVVVGIFPPLSLACRLGKILS*GRKLPK
Trigger: TTTGGGTAACTTTCTTCCCCAAGAAAGTATTTTCCC...CAACCTACATGCTAGAGAGAGAGGAGGAAATATACCCACGACCACACAGCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
3UTR-3UTR TCA 90 bp AATAGCTATAAAGATGGGCTCCCAGGCTTAAGCAAGCACTCTACTCTATATTCCGAACTTTTCCTCCCCTaGATCATGTTACTCTGTAGC +
Preference number: 2 (lower is better)
Translates to: NSYKDGLPGLSKHSTLYSELFLP*IMLLCS
Trigger: GCTACAGAGTAACATGATTCAGGGGAGGAAAAGTTC...GGAATATAGAGTAGAGTGCTTGCTTAAGCCTGGGAGCCCATCTTTATAGCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
3UTR-3UTR GCA 90 bp GACACACTCACCTTATATAGTTTAGAAATGGCCATGTCTCTTTTCTTACATCAAAGGCGTGAGCCACCATaGCTAGCCTGGGAATACACA +
Preference number: 2 (lower is better)
Translates to: DTLTLYSLEMAMSLFLHQRREPP*LAWEYT
Trigger: TGTGTATTCCCAGGCTAGGCATGGTGGCTCACGCCT...TTGATGTAAGAAAAGAGACATGGCCATTTCTAAACTATATAAGGTGAGTGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
3UTR-3UTR TCA 90 bp ACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGTTCTGTGTTTTCTGTTaGTTAAACCTCCTCATTTGG +
Preference number: 2 (lower is better)
Translates to: TVDPCMAPHLFSGVDVTWFCVFC*LNLLIW
Trigger: CCAAATGAGGAGGTTTAATCAACAGAAAACACAGAA...CCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
3UTR-3UTR TCA 90 bp TATAAAGATGGGCTCCCAGGCTTAAGCAAGCACTCTACTCTATATTCCAATCCTGTGCTGGCAAGACAGTaGTTTATTGATTCTGGTTTC +
Preference number: 2 (lower is better)
Translates to: YKDGLPGLSKHSTLYSNPVLARQ*FIDSGF
Trigger: GAAACCAGAATCAATAAATCACTGTCTTGCCAGCAC...AGGATTGGAATATAGAGTAGAGTGCTTGCTTAAGCCTGGGAGCCCATCTTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
3UTR-3UTR TCA 90 bp TATAAAGATGGGCTCCCAGGCTTAAGCAAGCACTCTACTCTATATTCCAATCCTCCTAATCCTCTTGTATaGGGCTTTGGAAAAGAACCA +
Preference number: 2 (lower is better)
Translates to: YKDGLPGLSKHSTLYSNPPNPLV*GFGKEP
Trigger: TGGTTCTTTTCCAAAGCCTCATACAAGAGGATTAGG...AGGATTGGAATATAGAGTAGAGTGCTTGCTTAAGCCTGGGAGCCCATCTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
3UTR-3UTR CCA 90 bp AATAGCTATAAAGATGGGCTCCCAGGCTTAAGCAAGCACTCTACTCTATATTCCCCACCATGCCTAGCCTaGGAATACACATTTTTAAGA +
Preference number: 2 (lower is better)
Translates to: NSYKDGLPGLSKHSTLYSPPCLA*EYTFLR
Trigger: TCTTAAAAATGTGTATTCCCAGGCTAGGCATGGTGG...GGAATATAGAGTAGAGTGCTTGCTTAAGCCTGGGAGCCCATCTTTATAGCTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
3UTR-3UTR TCA 90 bp CAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATTCTGTGTTTTCTGTTaGTTAAACCTCCTCATTTGG +
Preference number: 2 (lower is better)
Translates to: QTVDPCMAPHLFSGVDVTFCVFC*LNLLIW
Trigger: CCAAATGAGGAGGTTTAATCAACAGAAAACACAGAA...TGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
3UTR-3UTR TCA 90 bp TATAAAGATGGGCTCCCAGGCTTAAGCAAGCACTCTACTCTATATTCCAATCCTGATATGCCCAAGCAATaGAGCATAAGCTATTCAATT +
Preference number: 2 (lower is better)
Translates to: YKDGLPGLSKHSTLYSNPDMPKQ*SISYSI
Trigger: AATTGAATAGCTTATGCTTCATTGCTTGGGCATATC...AGGATTGGAATATAGAGTAGAGTGCTTGCTTAAGCCTGGGAGCCCATCTTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
3UTR-3UTR CCA 90 bp AATAGCTATAAAGATGGGCTCCCAGGCTTAAGCAAGCACTCTACTCTATATTCCGGGAAAATACTTTCTTaGGGAAGAAAGTTACCCAAA +
Preference number: 2 (lower is better)
Translates to: NSYKDGLPGLSKHSTLYSGKILS*GRKLPK
Trigger: TTTGGGTAACTTTCTTCCCCAAGAAAGTATTTTCCC...GGAATATAGAGTAGAGTGCTTGCTTAAGCCTGGGAGCCCATCTTTATAGCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
3UTR-3UTR GCA 90 bp GACACACTCACCTTATATAGTTTAGAAATGGCCATGTCTCTTTTCTTACATCAAAAGAGAGCCATGGCTTaGCAGGGATTAGTTTATGGT +
Preference number: 2 (lower is better)
Translates to: DTLTLYSLEMAMSLFLHQKRAMA*QGLVYG
Trigger: ACCATAAACTAATCCCTGGCAAGCCATGGCTCTCTT...TTGATGTAAGAAAAGAGACATGGCCATTTCTAAACTATATAAGGTGAGTGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
3UTR-3UTR GCA 90 bp TACGTGATCCAAGGTTTTCTTGAAGGTAGTGCAAAAGATGCAGTTCATAATGTTGGCAAACACAGTAACTaGCTTACTGTGCAAAAGGAA +
Preference number: 2 (lower is better)
Translates to: YVIQGFLEGSAKDAVHNVGKHSN*LTVQKE
Trigger: TTCCTTTTGCACAGTAAGGCAGTTACTGTGTTTGCC...AACATTATGAACTGCATCTTTTGCACTACCTTCAAGAAAACCTTGGATCACGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395652.7
3UTR-3UTR TCA 90 bp TGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTATCAAAATTCTGTGTTTTCTGTTaGTTAAACCTCCTCATTTGG +
Preference number: 2 (lower is better)
Translates to: CMAPHLFSGVDVTWQVSKFCVFC*LNLLIW
Trigger: CCAAATGAGGAGGTTTAATCAACAGAAAACACAGAA...TTTTGATACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
3UTR-3UTR TCA 90 bp TACGTGATCCAAGGTTTTCTTGAAGGTAGTGCAAAAGATGCAGTTCATAATGTTTTCTGTGTTTTCTGTTaGTTAAACCTCCTCATTTGG +
Preference number: 2 (lower is better)
Translates to: YVIQGFLEGSAKDAVHNVFCVFC*LNLLIW
Trigger: CCAAATGAGGAGGTTTAATCAACAGAAAACACAGAA...AACATTATGAACTGCATCTTTTGCACTACCTTCAAGAAAACCTTGGATCACGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000395652.7
3UTR-3UTR CCA 90 bp TTCTACACAGGTCAAAATTATATCACTTTTAGAGCAGCAATACGTGATCCAAGGGGAGTAGATGTTACATaGCAGGTATCAAAATGTGAT +
Preference number: 2 (lower is better)
Translates to: FYTGQNYITFRAAIRDPRGVDVT*QVSKCD
Trigger: ATCACATTTTGATACCTGCCATGTAACATCTACTCC...CCTTGGATCACGTATTGCTGCTCTAAAAGTGATATAATTTTGACCTGTGTAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000395652.7
3UTR-3UTR CCA 90 bp GACACACTCACCTTATATAGTTTAGAAATGGCCATGTCTCTTTTCTTACATCAAAACTATCCCTCTGGATaGTTGTTCAAGTGTACACAT +
Preference number: 2 (lower is better)
Translates to: DTLTLYSLEMAMSLFLHQNYPSG*LFKCTH
Trigger: ATGTGTACACTTGAACAACCATCCAGAGGGATAGTT...TTGATGTAAGAAAAGAGACATGGCCATTTCTAAACTATATAAGGTGAGTGTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
3UTR CCA 72 bp CACCTGGCTGGAGTCCAGCACCAACTGGATACTAACTaGCTGTGTGGTCGTGGGTATATTTCCTCCTCTCTC +
Preference number: 3 (lower is better)
Translates to: HLAGVQHQLDTN*LCGRGYISSSL
Trigger: GAGAGAGGAGGAAATATACCCACGACCACACAGCCAGTTAGTATCCAGTTGGTGCTGGACTCCAGCCAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
3UTR CCA 72 bp ATGAGGCAGGACACCTGGCTGGAGTCCAGCACCAACTaGATACTAACTGGCTGTGTGGTCGTGGGTATATTT +
Preference number: 3 (lower is better)
Translates to: MRQDTWLESSTN*ILTGCVVVGIF
Trigger: AAATATACCCACGACCACACAGCCAGTTAGTATCCAGTTGGTGCTGGACTCCAGCCAGGTGTCCTGCCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
3UTR-3UTR CAA 90 bp ACTGGCTGTGTGGTCGTGGGTATATTTCCTCCTCTCTCTCTAGCATGTAGGTTGAAAGAGAGCCATGGCTaGCCAGGGATTAGTTTATGG +
Preference number: 3 (lower is better)
Translates to: TGCVVVGIFPPLSLACRLKESHG*PGISLW
Trigger: CCATAAACTAATCCCTGGCAAGCCATGGCTCTCTTT...CAACCTACATGCTAGAGAGAGAGGAGGAAATATACCCACGACCACACAGCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
3UTR CCA 72 bp TCTATATATCATTTAACTACCATGAGGCAGGACACCTaGCTGGAGTCCAGCACCAACTGGATACTAACTGGC +
Preference number: 3 (lower is better)
Translates to: SIYHLTTMRQDT*LESSTNWILTG
Trigger: GCCAGTTAGTATCCAGTTGGTGCTGGACTCCAGCCAGGTGTCCTGCCTCATGGTAGTTAAATGATATATAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
3UTR TCA 72 bp AGGACCAGCCGTGGATGCCCACACGATCTAAGTCAATaGAATCATATCGAGAAGCTAGATATTGGAGTCCTT +
Preference number: 3 (lower is better)
Translates to: RTSRGCPHDLSQ*NHIEKLDIGVL
Trigger: AAGGACTCCAATATCTAGCTTCTCGATATGATTTCATTGACTTAGATCGTGTGGGCATCCACGGCTGGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395652.7
3UTR GCA 72 bp TGTGATAAAAAGCATCAAACTCATAGATGCCTTCCCTaGCACTGGTGTCAATGTGACCAATCTAGCACCCCA +
Preference number: 3 (lower is better)
Translates to: CDKKHQTHRCLP*HWCQCDQSSTP
Trigger: TGGGGTGCTAGATTGGTCACATTGACACCAGTGGCAGGGAAGGCATCTATGAGTTTGATGCTTTTTATCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
3UTR-3UTR CAA 90 bp ACTGGCTGTGTGGTCGTGGGTATATTTCCTCCTCTCTCTCTAGCATGTAGGTTGAGGAATATGTATCATTaGATTTTGAGCATGTGGGGT +
Preference number: 3 (lower is better)
Translates to: TGCVVVGIFPPLSLACRLRNMYH*ILSMWG
Trigger: ACCCCACATGCTCAAAATCAAATGATACATATTCCT...CAACCTACATGCTAGAGAGAGAGGAGGAAATATACCCACGACCACACAGCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
3UTR GCA 72 bp CTCAGCATGTCCAATAACACTGGCAAACACAGTAACTaGCTTACTGTGCAAAAGGAACATCGGATTCTCATC +
Preference number: 3 (lower is better)
Translates to: LSMSNNTGKHSN*LTVQKEHRILI
Trigger: GATGAGAATCCGATGTTCCTTTTGCACAGTAAGGCAGTTACTGTGTTTGCCAGTGTTATTGGACATGCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395652.7
3UTR CCA 72 bp AACGATTTGGTTCAGAGGGGAACTTTTCTGCTTGCATaGCCACAGATCCTAAGTAATAGCCCTGTTCATTCT +
Preference number: 3 (lower is better)
Translates to: NDLVQRGTFLLA*PQILSNSPVHS
Trigger: AGAATGAACAGGGCTATTACTTAGGATCTGTGGCCATGCAAGCAGAAAAGTTCCCCTCTGAACCAAATCGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395652.7
3UTR-3UTR CAA 90 bp GCAATAGCAACCCTGAAGATATCTGACCTCTGCATTAATGCCATCAGGGAGAGGATCGTCAATTTCTATTaGACCTCAGCATGTCCAATA +
Preference number: 3 (lower is better)
Translates to: AIATLKISDLCINAIRERIVNFY*TSACPI
Trigger: TATTGGACATGCTGAGGTCAAATAGAAATTGACGAT...CCTCTCCCTGATGGCATTAATGCAGAGGTCAGATATCTTCAGGGTTGCTATTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395652.7
3UTR GCA 72 bp CCAATAACACTGGCAAACACAGTAACTGCCTTACTGTaGAAAAGGAACATCGGATTCTCATCATTTCCCAAA +
Preference number: 3 (lower is better)
Translates to: PITLANTVTALL*KRNIGFSSFPK
Trigger: TTTGGGAAATGATGAGAATCCGATGTTCCTTTTGCACAGTAAGGCAGTTACTGTGTTTGCCAGTGTTATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395652.7
3UTR-3UTR CAA 90 bp GAAACAGCCTTAATGGGTGAGAGGTTTCAATGGAGTAGCTGCTTAAAAGCTACTGTAATTCTTATGGTATaGCTGGGTCTCTCAGGAATA +
Preference number: 3 (lower is better)
Translates to: ETALMGERFQWSSCLKATVILMV*LGLSGI
Trigger: TATTCCTGAGAGACCCAGCAATACCATAAGAATTAC...AGTAGCTTTTAAGCAGCTACTCCATTGAAACCTCTCACCCATTAAGGCTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
3UTR-3UTR CAA 90 bp GACACACTCACCTTATATAGTTTAGAAATGGCCATGTCTCTTTTCTTACATCAAAAAGAGAGCCATGGCTaGCCAGGGATTAGTTTATGG +
Preference number: 3 (lower is better)
Translates to: DTLTLYSLEMAMSLFLHQKESHG*PGISLW
Trigger: CCATAAACTAATCCCTGGCAAGCCATGGCTCTCTTT...TTGATGTAAGAAAAGAGACATGGCCATTTCTAAACTATATAAGGTGAGTGTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
3UTR CCA 72 bp TTTGAAGAAACAGCCTTAATGGGTGAGAGGTTTCAATaGAGTAGCTGCTTAAAAGCTACTGTATACCATTTC +
Preference number: 3 (lower is better)
Translates to: FEETALMGERFQ*SSCLKATVYHF
Trigger: GAAATGGTATACAGTAGCTTTTAAGCAGCTACTCCATTGAAACCTCTCACCCATTAAGGCTGTTTCTTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
3UTR TCA 72 bp TTCTCTATAGAAGAGTTTCTTAAAGTAGTCCACAGATaGCTTACTATAGGATCGCCTGGAAAGCTTGTTAGA +
Preference number: 3 (lower is better)
Translates to: FSIEEFLKVVHR*LTIGSPGKLVR
Trigger: TCTAACAAGCTTTCCAGGCGATCCTATAGTAAGTCATCTGTGGACTACTTTAAGAAACTCTTCTATAGAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
3UTR TCA 72 bp GAATCATGTTACTCTGTAGCTGTGCTGGCAAGACAGTaGTTTATTGATTCTGGTTTCCTTAATATTACAGTT +
Preference number: 3 (lower is better)
Translates to: ESCYSVAVLARQ*FIDSGFLNITV
Trigger: AACTGTAATATTAAGGAAACCAGAATCAATAAATCACTGTCTTGCCAGCACAGCTACAGAGTAACATGATTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
3UTR CCA 72 bp ATGGCACCACATTTATTTTCAGGAGTAGATGTTACATaGCAGGTATCAAAATGTGATGATCAATTCTGTGTT +
Preference number: 3 (lower is better)
Translates to: MAPHLFSGVDVT*QVSKCDDQFCV
Trigger: AACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR GCA 90 bp AGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTGCCTGCGCCGCTTCATaGTGCGCCGCCTCCACTCCG +
Preference number: 4 (lower is better)
Translates to: RPLHGTTFIFRSRCYMAGACAAS*CAASTP
Trigger: CGGAGTGGAGGCGGCGCAGCATGAAGCGGCGCAGGC...ACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000358939.8
CDS-3UTR GCA 90 bp AGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTGCTATGGAGCGGGCCTaGGCCGCTTCATGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: RPLHGTTFIFRSRCYMAGAMERA*AASCCA
Trigger: GGCGCAGCATGAAGCGGCGCAGGCCCGCTCCATAGC...ACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000358939.8
CDS-3UTR GCA 90 bp GTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGCTATGGAGCGGGCCTaGGCCGCTTCATGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: VDPCMAPHLFSGVDVTWQAMERA*AASCCA
Trigger: GGCGCAGCATGAAGCGGCGCAGGCCCGCTCCATAGC...CTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000358939.8
CDS-3UTR CCA 90 bp ACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGTCCCGACGTGCGCTATaGAGCGGGCCTGCGCCGCTT +
Preference number: 4 (lower is better)
Translates to: TVDPCMAPHLFSGVDVTWSRRAL*SGPAPL
Trigger: AAGCGGCGCAGGCCCGCTCCATAGCGCACGTCGGGA...CCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000358939.8
CDS-3UTR GCA 90 bp ATTACTACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTTGCGCCGCTTCATGCTaGGCCGCCTCCACTCCGGTC +
Preference number: 4 (lower is better)
Translates to: ITTTNRRPLHGTTFIFRSCAASC*AASTPV
Trigger: GACCGGAGTGGAGGCGGCGCAGCATGAAGCGGCGCA...ACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGTAGTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000358939.8
CDS-3UTR GCA 90 bp ATTACTACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTGCTATGGAGCGGGCCTaGGCCGCTTCATGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: ITTTNRRPLHGTTFIFRSAMERA*AASCCA
Trigger: GGCGCAGCATGAAGCGGCGCAGGCCCGCTCCATAGC...ACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGTAGTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000358939.8
CDS-3UTR CCA 90 bp CAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATCCCGACGTGCGCTATaGAGCGGGCCTGCGCCGCTT +
Preference number: 4 (lower is better)
Translates to: QTVDPCMAPHLFSGVDVTSRRAL*SGPAPL
Trigger: AAGCGGCGCAGGCCCGCTCCATAGCGCACGTCGGGA...TGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000358939.8
CDS-3UTR CCA 90 bp CTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTATCAAACGGTCCTGGTTGCAGTaGCTTCCTCGGCGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: LHGTTFIFRSRCYMAGIKRSWLQ*LPRRRR
Trigger: GCGCCGCCGCCGAGGAAGCCACTGCAACCAGGACCG...TTTGATACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000358939.8
CDS-3UTR TCA 90 bp AAGATCCACAGAGTGACTGGGGCCCCAGCAATAGCAACCCTGAAGATATCTGACGATGCAGCAAGAATGTaGGTAGCCACGGTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: KIHRVTGAPAIATLKISDDAARM*VATVSQ
Trigger: CTGACTGACCGTGGCTACTCACATTCTTGCTGCATC...GTCAGATATCTTCAGGGTTGCTATTGCTGGGGCCCCAGTCACTCTGTGGATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR GCA 90 bp TTAAACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGCCTGCGCCGCTTCATaGTGCGCCGCCTCCACTCCG +
Preference number: 4 (lower is better)
Translates to: LNLLIWLNSQCIPESSTQACAAS*CAASTP
Trigger: CGGAGTGGAGGCGGCGCAGCATGAAGCGGCGCAGGC...CTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000358939.8
CDS-3UTR CCA 90 bp TGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTATCAAAACGGTCCTGGTTGCAGTaGCTTCCTCGGCGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: CMAPHLFSGVDVTWQVSKRSWLQ*LPRRRR
Trigger: GCGCCGCCGCCGAGGAAGCCACTGCAACCAGGACCG...TTTTGATACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000358939.8
CDS-3UTR CCA 90 bp ACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACCCTCCACTCCGGTCCTaGTTGCAGTGGCTTCCTCGG +
Preference number: 4 (lower is better)
Translates to: TNRRPLHGTTFIFRSRCYPPLRS*LQWLPR
Trigger: CCGAGGAAGCCACTGCAACCAGGACCGGAGTGGAGG...GTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000358939.8
CDS-3UTR CCA 90 bp CAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACACCTCCACTCCGGTCCTaGTTGCAGTGGCTTCCTCGG +
Preference number: 4 (lower is better)
Translates to: QTVDPCMAPHLFSGVDVTPPLRS*LQWLPR
Trigger: CCGAGGAAGCCACTGCAACCAGGACCGGAGTGGAGG...TGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000358939.8
CDS-3UTR CCA 90 bp ACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGGGCAGGACACCTGGCTaGAGTCCAGCACCAACTGGA +
Preference number: 4 (lower is better)
Translates to: TVDPCMAPHLFSGVDVTWGRTPG*SPAPTG
Trigger: TCCAGTTGGTGCTGGACTCCAGCCAGGTGTCCTGCC...CCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR GCA 90 bp CTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCAAACACTCCGGTCCTGGTTaGAGTGGCTTCCTCGGCGGC +
Preference number: 4 (lower is better)
Translates to: LLIWLNSQCIPESSTQVKHSGPG*SGFLGG
Trigger: GCCGCCGAGGAAGCCACTGCAACCAGGACCGGAGTG...TTTGACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000358939.8
CDS-3UTR GCA 90 bp ATTAGATTACTACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCACACTCCGGTCCTGGTTaGAGTGGCTTCCTCGGCGGC +
Preference number: 4 (lower is better)
Translates to: IRLLPQTVDPCMAPHLFSHSGPG*SGFLGG
Trigger: GCCGCCGAGGAAGCCACTGCAACCAGGACCGGAGTG...TGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGTAGTAATCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000358939.8
CDS-3UTR GCA 90 bp TTAAACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGTGCGCCGCTTCATGCTaGGCCGCCTCCACTCCGGTC +
Preference number: 4 (lower is better)
Translates to: LNLLIWLNSQCIPESSTQCAASC*AASTPV
Trigger: GACCGGAGTGGAGGCGGCGCAGCATGAAGCGGCGCA...CTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000358939.8
CDS-3UTR CCA 90 bp GAAACAGCCTTAATGGGTGAGAGGTTTCAATGGAGTAGCTGCTTAAAAGCTACTCCTCCACTCCGGTCCTaGTTGCAGTGGCTTCCTCGG +
Preference number: 4 (lower is better)
Translates to: ETALMGERFQWSSCLKATPPLRS*LQWLPR
Trigger: CCGAGGAAGCCACTGCAACCAGGACCGGAGTGGAGG...AGTAGCTTTTAAGCAGCTACTCCATTGAAACCTCTCACCCATTAAGGCTGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300141.11
CDS-3UTR CCA 90 bp TTAAACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGTCCCGACGTGCGCTATaGAGCGGGCCTGCGCCGCTT +
Preference number: 4 (lower is better)
Translates to: LNLLIWLNSQCIPESSTQSRRAL*SGPAPL
Trigger: AAGCGGCGCAGGCCCGCTCCATAGCGCACGTCGGGA...CTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000358939.8
CDS-3UTR CCA 90 bp AAGATCCACAGAGTGACTGGGGCCCCAGCAATAGCAACCCTGAAGATATCTGACATCTGTAGGCGAGTCTaGGAGCGATCTAGTAGGATG +
Preference number: 4 (lower is better)
Translates to: KIHRVTGAPAIATLKISDICRRV*ERSSRM
Trigger: CATCCTACTAGATCGCTCCCAGACTCGCCTACAGAT...GTCAGATATCTTCAGGGTTGCTATTGCTGGGGCCCCAGTCACTCTGTGGATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR GCA 90 bp TGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTATCAAAACACTCCGGTCCTGGTTaGAGTGGCTTCCTCGGCGGC +
Preference number: 4 (lower is better)
Translates to: CMAPHLFSGVDVTWQVSKHSGPG*SGFLGG
Trigger: GCCGCCGAGGAAGCCACTGCAACCAGGACCGGAGTG...TTTTGATACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000358939.8
CDS-3UTR TCA 90 bp GTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGATGCAGCAAGAATGTaGGTAGCCACGGTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: VDPCMAPHLFSGVDVTWQDAARM*VATVSQ
Trigger: CTGACTGACCGTGGCTACTCACATTCTTGCTGCATC...CTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR TCA 90 bp ACTGGCTGTGTGGTCGTGGGTATATTTCCTCCTCTCTCTCTAGCATGTAGGTTGTTCACCAACTGCACCTaGGGACCACCATATATGAAC +
Preference number: 4 (lower is better)
Translates to: TGCVVVGIFPPLSLACRLFTNCT*GPPYMN
Trigger: GTTCATATATGGTGGTCCTCAGGTGCAGTTGGTGAA...CAACCTACATGCTAGAGAGAGAGGAGGAAATATACCCACGACCACACAGCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR GCA 90 bp TGTAAGAGCAGTAAACGATTTGGTTCAGAGGGGAACTTTTCTGCTTGCATGGCCAGGACCAGCCGTGGATaGCCACACGATCTAAGTCAA +
Preference number: 4 (lower is better)
Translates to: CKSSKRFGSEGNFSACMARTSRG*PHDLSQ
Trigger: TTGACTTAGATCGTGTGGGCATCCACGGCTGGTCCT...GGCCATGCAAGCAGAAAAGTTCCCCTCTGAACCAAATCGTTTACTGCTCTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR GCA 90 bp CAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACAAGGCGTGAGCCACCATaGCTAGCCTGGGAATACACA +
Preference number: 4 (lower is better)
Translates to: QTVDPCMAPHLFSGVDVTRREPP*LAWEYT
Trigger: TGTGTATTCCCAGGCTAGGCATGGTGGCTCACGCCT...TGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR CCA 90 bp AAGATCCACAGAGTGACTGGGGCCCCAGCAATAGCAACCCTGAAGATATCTGACCAGGCAGCCCACCACTaGATCGTTTATATTTGCTTT +
Preference number: 4 (lower is better)
Translates to: KIHRVTGAPAIATLKISDQAAHH*IVYICF
Trigger: AAAGCAAATATAAACGATCCAGTGGTGGGCTGCCTG...GTCAGATATCTTCAGGGTTGCTATTGCTGGGGCCCCAGTCACTCTGTGGATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR CCA 90 bp ACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACGATCCACAGAGTGACTaGGGCCCCAGCAATAGCAAC +
Preference number: 4 (lower is better)
Translates to: TNRRPLHGTTFIFRSRCYDPQSD*GPSNSN
Trigger: GTTGCTATTGCTGGGGCCCCAGTCACTCTGTGGATC...GTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR CCA 90 bp TCAGCATGTCCAATAACACTGGCAAACACAGTAACTGCCTTACTGTGCAAAAGGGATCCACAGAGTGACTaGGGCCCCAGCAATAGCAAC +
Preference number: 4 (lower is better)
Translates to: SACPITLANTVTALLCKRDPQSD*GPSNSN
Trigger: GTTGCTATTGCTGGGGCCCCAGTCACTCTGTGGATC...CCTTTTGCACAGTAAGGCAGTTACTGTGTTTGCCAGTGTTATTGGACATGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR CCA 90 bp CAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACAGATCCACAGAGTGACTaGGGCCCCAGCAATAGCAAC +
Preference number: 4 (lower is better)
Translates to: QTVDPCMAPHLFSGVDVTDPQSD*GPSNSN
Trigger: GTTGCTATTGCTGGGGCCCCAGTCACTCTGTGGATC...TGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR TCA 90 bp ATTACTACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTGGTAGCGACTCCAGCTaGTCTGGCATCTTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: ITTTNRRPLHGTTFIFRSGSDSS*SGIFFH
Trigger: ATGGAAGAAGATGCCAGATCAGCTGGAGTCGCTACC...ACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGTAGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR TCA 90 bp ACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACGGTAGCGACTCCAGCTaGTCTGGCATCTTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: TNRRPLHGTTFIFRSRCYGSDSS*SGIFFH
Trigger: ATGGAAGAAGATGCCAGATCAGCTGGAGTCGCTACC...GTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR TCA 90 bp TCAGCATGTCCAATAACACTGGCAAACACAGTAACTGCCTTACTGTGCAAAAGGGGTAGCGACTCCAGCTaGTCTGGCATCTTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: SACPITLANTVTALLCKRGSDSS*SGIFFH
Trigger: ATGGAAGAAGATGCCAGATCAGCTGGAGTCGCTACC...CCTTTTGCACAGTAAGGCAGTTACTGTGTTTGCCAGTGTTATTGGACATGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR TCA 90 bp AAGATCCACAGAGTGACTGGGGCCCCAGCAATAGCAACCCTGAAGATATCTGACTTTAGGATAACGGAATaGATCTGCCCTCCTTGTTTC +
Preference number: 4 (lower is better)
Translates to: KIHRVTGAPAIATLKISDFRITE*ICPPCF
Trigger: GAAACAAGGAGGGCAGATTCATTCCGTTATCCTAAA...GTCAGATATCTTCAGGGTTGCTATTGCTGGGGCCCCAGTCACTCTGTGGATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR TCA 90 bp GTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGCTGACTACGTACAGGTaGTGCTCTAAAGGGGAGTCT +
Preference number: 4 (lower is better)
Translates to: VDPCMAPHLFSGVDVTWQLTTYR*CSKGES
Trigger: AGACTCCCCTTTAGAGCATCACCTGTACGTAGTCAG...CTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR TCA 90 bp CAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACAGATGCAGCAAGAATGTaGGTAGCCACGGTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: QTVDPCMAPHLFSGVDVTDAARM*VATVSQ
Trigger: CTGACTGACCGTGGCTACTCACATTCTTGCTGCATC...TGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR TCA 90 bp ATTACTACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTGATGCAGCAAGAATGTaGGTAGCCACGGTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: ITTTNRRPLHGTTFIFRSDAARM*VATVSQ
Trigger: CTGACTGACCGTGGCTACTCACATTCTTGCTGCATC...ACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGTAGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR TCA 90 bp ACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACGATGCAGCAAGAATGTaGGTAGCCACGGTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: TNRRPLHGTTFIFRSRCYDAARM*VATVSQ
Trigger: CTGACTGACCGTGGCTACTCACATTCTTGCTGCATC...GTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR TCA 90 bp ACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACCTCCCCACCCCACTGTaGTTCCCTTCAATCTCCTTA +
Preference number: 4 (lower is better)
Translates to: TNRRPLHGTTFIFRSRCYLPTPL*FPSISL
Trigger: TAAGGAGATTGAAGGGAATCACAGTGGGGTGGGGAG...GTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR GCA 90 bp ACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACAGGACCAGCCGTGGATaGCCACACGATCTAAGTCAA +
Preference number: 4 (lower is better)
Translates to: TNRRPLHGTTFIFRSRCYRTSRG*PHDLSQ
Trigger: TTGACTTAGATCGTGTGGGCATCCACGGCTGGTCCT...GTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300141.11
ENST00000341861.9
ENST00000558786.5
CDS-3UTR GCA 90 bp ACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTAGAGGGGAACTTTTCTaGTTGCATGGCCACAGATCC +
Preference number: 4 (lower is better)
Translates to: TTNRRPLHGTTFIFRSRCRGELF*LHGHRS
Trigger: GGATCTGTGGCCATGCAAGCAGAAAAGTTCCCCTCT...ACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR GCA 90 bp TTGACCTCAGCATGTCCAATAACACTGGCAAACACAGTAACTGCCTTACTGTGCAGAGGGGAACTTTTCTaGTTGCATGGCCACAGATCC +
Preference number: 4 (lower is better)
Translates to: LTSACPITLANTVTALLCRGELF*LHGHRS
Trigger: GGATCTGTGGCCATGCAAGCAGAAAAGTTCCCCTCT...GCACAGTAAGGCAGTTACTGTGTTTGCCAGTGTTATTGGACATGCTGAGGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR GCA 90 bp TATAAAGATGGGCTCCCAGGCTTAAGCAAGCACTCTACTCTATATTCCAATCCTAGGCGTGAGCCACCATaGCTAGCCTGGGAATACACA +
Preference number: 4 (lower is better)
Translates to: YKDGLPGLSKHSTLYSNPRREPP*LAWEYT
Trigger: TGTGTATTCCCAGGCTAGGCATGGTGGCTCACGCCT...AGGATTGGAATATAGAGTAGAGTGCTTGCTTAAGCCTGGGAGCCCATCTTTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR CCA 90 bp ACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCGACTCCAGCTGATCTaGCATCTTCTTCCATGTTGG +
Preference number: 4 (lower is better)
Translates to: TVDPCMAPHLFSGVDVTWRLQLI*HLLPCW
Trigger: CCAACATGGAAGAAGATGCCAGATCAGCTGGAGTCG...CCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CCA 90 bp AGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTACACTTGAAATCACTTaGAGCAGGCAGCCCACCACT +
Preference number: 4 (lower is better)
Translates to: RPLHGTTFIFRSRCYMAGTLEIT*SRQPTT
Trigger: AGTGGTGGGCTGCCTGCTCCAAGTGATTTCAAGTGT...ACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CCA 90 bp TGTAAGAGCAGTAAACGATTTGGTTCAGAGGGGAACTTTTCTGCTTGCATGGCCACACTTGAAATCACTTaGAGCAGGCAGCCCACCACT +
Preference number: 4 (lower is better)
Translates to: CKSSKRFGSEGNFSACMATLEIT*SRQPTT
Trigger: AGTGGTGGGCTGCCTGCTCCAAGTGATTTCAAGTGT...GGCCATGCAAGCAGAAAAGTTCCCCTCTGAACCAAATCGTTTACTGCTCTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR CCA 90 bp TATAAAGATGGGCTCCCAGGCTTAAGCAAGCACTCTACTCTATATTCCAATCCTGATCCACAGAGTGACTaGGGCCCCAGCAATAGCAAC +
Preference number: 4 (lower is better)
Translates to: YKDGLPGLSKHSTLYSNPDPQSD*GPSNSN
Trigger: GTTGCTATTGCTGGGGCCCCAGTCACTCTGTGGATC...AGGATTGGAATATAGAGTAGAGTGCTTGCTTAAGCCTGGGAGCCCATCTTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR CCA 90 bp AACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCGATCCACAGAGTGACTaGGGCCCCAGCAATAGCAAC +
Preference number: 4 (lower is better)
Translates to: NLLIWLNSQCIPESSTQVDPQSD*GPSNSN
Trigger: GTTGCTATTGCTGGGGCCCCAGTCACTCTGTGGATC...GACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR CCA 90 bp TTAAACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGCCTGCTGCGAGTGGGTaGAACAGAATGGGAGAGGGC +
Preference number: 4 (lower is better)
Translates to: LNLLIWLNSQCIPESSTQPAASG*NRMGEG
Trigger: GCCCTCTCCCATTCTGTTCCACCCACTCGCAGCAGG...CTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341861.9
CDS-3UTR TCA 90 bp AACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCGGTAGCGACTCCAGCTaGTCTGGCATCTTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: NLLIWLNSQCIPESSTQVGSDSS*SGIFFH
Trigger: ATGGAAGAAGATGCCAGATCAGCTGGAGTCGCTACC...GACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR TCA 90 bp ACTGGCTGTGTGGTCGTGGGTATATTTCCTCCTCTCTCTCTAGCATGTAGGTTGTTTAGGATAACGGAATaGATCTGCCCTCCTTGTTTC +
Preference number: 4 (lower is better)
Translates to: TGCVVVGIFPPLSLACRLFRITE*ICPPCF
Trigger: GAAACAAGGAGGGCAGATTCATTCCGTTATCCTAAA...CAACCTACATGCTAGAGAGAGAGGAGGAAATATACCCACGACCACACAGCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR TCA 90 bp ACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACCTGACTACGTACAGGTaGTGCTCTAAAGGGGAGTCT +
Preference number: 4 (lower is better)
Translates to: TNRRPLHGTTFIFRSRCYLTTYR*CSKGES
Trigger: AGACTCCCCTTTAGAGCATCACCTGTACGTAGTCAG...GTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR TCA 90 bp GTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGAGTCACAGTGCTGACTaGTGCAGCAAGAATGTGAGT +
Preference number: 4 (lower is better)
Translates to: VDPCMAPHLFSGVDVTWQSHSAD*CSKNVS
Trigger: ACTCACATTCTTGCTGCATCAGTCAGCACTGTGACT...CTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR TCA 90 bp ACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTAGTCACAGTGCTGACTaGTGCAGCAAGAATGTGAGT +
Preference number: 4 (lower is better)
Translates to: TTNRRPLHGTTFIFRSRCSHSAD*CSKNVS
Trigger: ACTCACATTCTTGCTGCATCAGTCAGCACTGTGACT...ACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR TCA 90 bp ACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGTTCACCAACTGCACCTaGGGACCACCATATATGAAC +
Preference number: 4 (lower is better)
Translates to: TVDPCMAPHLFSGVDVTWFTNCT*GPPYMN
Trigger: GTTCATATATGGTGGTCCTCAGGTGCAGTTGGTGAA...CCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
CDS-3UTR TCA 90 bp AGCAGTAAACGATTTGGTTCAGAGGGGAACTTTTCTGCTTGCATGGCCACAGATTTCACCAACTGCACCTaGGGACCACCATATATGAAC +
Preference number: 4 (lower is better)
Translates to: SSKRFGSEGNFSACMATDFTNCT*GPPYMN
Trigger: GTTCATATATGGTGGTCCTCAGGTGCAGTTGGTGAA...ATCTGTGGCCATGCAAGCAGAAAAGTTCCCCTCTGAACCAAATCGTTTACTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR TCA 90 bp GAAACAGCCTTAATGGGTGAGAGGTTTCAATGGAGTAGCTGCTTAAAAGCTACTCTCCCCACCCCACTGTaGTTCCCTTCAATCTCCTTA +
Preference number: 4 (lower is better)
Translates to: ETALMGERFQWSSCLKATLPTPL*FPSISL
Trigger: TAAGGAGATTGAAGGGAATCACAGTGGGGTGGGGAG...AGTAGCTTTTAAGCAGCTACTCCATTGAAACCTCTCACCCATTAAGGCTGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR TCA 90 bp ATTAGATTACTACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCATCTCCTGACTTCAAGTaGTTCACCCGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: IRLLPQTVDPCMAPHLFSSPDFK*FTRLGL
Trigger: GAGGCCAAGGCGGGTGAATCACTTGAAGTCAGGAGA...TGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGTAGTAATCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR TCA 90 bp ATTACTACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTCTGGTCTTGATCTCCTaGCTTCAAGTGATTCACCCG +
Preference number: 4 (lower is better)
Translates to: ITTTNRRPLHGTTFIFRSLVLIS*LQVIHP
Trigger: CGGGTGAATCACTTGAAGTCAGGAGATCAAGACCAG...ACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGTAGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR TCA 90 bp ACTGGCTGTGTGGTCGTGGGTATATTTCCTCCTCTCTCTCTAGCATGTAGGTTGAATAGTTACCACAGATaGGCAGCTTCATGGACTACT +
Preference number: 4 (lower is better)
Translates to: TGCVVVGIFPPLSLACRLNSYHR*AASWTT
Trigger: AGTAGTCCATGAAGCTGCTCATCTGTGGTAACTATT...CAACCTACATGCTAGAGAGAGAGGAGGAAATATACCCACGACCACACAGCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR TCA 90 bp ACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACAAAAACCAGAAAATCTaGGGCCGAAGCCCATCTGCC +
Preference number: 4 (lower is better)
Translates to: TNRRPLHGTTFIFRSRCYKNQKI*GRSPSA
Trigger: GGCAGATGGGCTTCGGCCTCAGATTTTCTGGTTTTT...GTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000341861.9
CDS-3UTR TCA 90 bp AGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTCACCTAAAGCCTCACTaGAGCCTAGCTATCTCATTC +
Preference number: 4 (lower is better)
Translates to: RPLHGTTFIFRSRCYMAGHLKPH*SLAISF
Trigger: GAATGAGATAGCTAGGCTTCAGTGAGGCTTTAGGTG...ACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341861.9
CDS-3UTR GCA 90 bp AGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTGGCCTTAAAGGTTGTTaGGTAAATCCTTGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: RPLHGTTFIFRSRCYMAGGLKGC*VNPCGP
Trigger: AGGGCCACAAGGATTTACGCAACAACCTTTAAGGCC...ACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR GCA 90 bp AACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCAGGACCAGCCGTGGATaGCCACACGATCTAAGTCAA +
Preference number: 4 (lower is better)
Translates to: NLLIWLNSQCIPESSTQVRTSRG*PHDLSQ
Trigger: TTGACTTAGATCGTGTGGGCATCCACGGCTGGTCCT...GACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000341861.9
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR GCA 90 bp ACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGGGGAACTTTTCTGCTTaGATGGCCACAGATCCTAAG +
Preference number: 4 (lower is better)
Translates to: TVDPCMAPHLFSGVDVTWGNFSA*MATDPK
Trigger: CTTAGGATCTGTGGCCATGCAAGCAGAAAAGTTCCC...CCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR GCA 90 bp ACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTGGGAACTTTTCTGCTTaGATGGCCACAGATCCTAAG +
Preference number: 4 (lower is better)
Translates to: TTNRRPLHGTTFIFRSRCGNFSA*MATDPK
Trigger: CTTAGGATCTGTGGCCATGCAAGCAGAAAAGTTCCC...ACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR GCA 90 bp CAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACAAGAGGGGAACTTTTCTaGTTGCATGGCCACAGATCC +
Preference number: 4 (lower is better)
Translates to: QTVDPCMAPHLFSGVDVTRGELF*LHGHRS
Trigger: GGATCTGTGGCCATGCAAGCAGAAAAGTTCCCCTCT...TGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR GCA 90 bp AGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTTCCCTCTGCTCATCCTaGTCTTCTCACAGGAATCTT +
Preference number: 4 (lower is better)
Translates to: RPLHGTTFIFRSRCYMAGSLCSS*SSHRNL
Trigger: AAGATTCCTGTGAGAAGAGCAGGATGAGCAGAGGGA...ACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321147.10
ENST00000341861.9
CDS-3UTR GCA 90 bp AGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTAGCATAGAATCCCTCTaGTCATCCTGCTCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: RPLHGTTFIFRSRCYMAGSIESL*SSCSSH
Trigger: GTGAGAAGAGCAGGATGAGCAGAGGGATTCTATGCT...ACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321147.10
ENST00000341861.9
CDS-3UTR CCA 90 bp ATTACTACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTCGACTCCAGCTGATCTaGCATCTTCTTCCATGTTGG +
Preference number: 4 (lower is better)
Translates to: ITTTNRRPLHGTTFIFRSRLQLI*HLLPCW
Trigger: CCAACATGGAAGAAGATGCCAGATCAGCTGGAGTCG...ACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGTAGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CCA 90 bp ATTACTACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTATCTGTAGGCGAGTCTaGGAGCGATCTAGTAGGATG +
Preference number: 4 (lower is better)
Translates to: ITTTNRRPLHGTTFIFRSICRRV*ERSSRM
Trigger: CATCCTACTAGATCGCTCCCAGACTCGCCTACAGAT...ACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGTAGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CCA 90 bp CTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCAAAGATCCACAGAGTGACTaGGGCCCCAGCAATAGCAAC +
Preference number: 4 (lower is better)
Translates to: LLIWLNSQCIPESSTQVKDPQSD*GPSNSN
Trigger: GTTGCTATTGCTGGGGCCCCAGTCACTCTGTGGATC...TTTGACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR CCA 90 bp ACTGGCTGTGTGGTCGTGGGTATATTTCCTCCTCTCTCTCTAGCATGTAGGTTGGGTGAGAGGTTTCAATaGAGTAGCTGCTTAAAAGCT +
Preference number: 4 (lower is better)
Translates to: TGCVVVGIFPPLSLACRLGERFQ*SSCLKA
Trigger: AGCTTTTAAGCAGCTACTCCATTGAAACCTCTCACC...CAACCTACATGCTAGAGAGAGAGGAGGAAATATACCCACGACCACACAGCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR CCA 90 bp ACTGGCTGTGTGGTCGTGGGTATATTTCCTCCTCTCTCTCTAGCATGTAGGTTGCCACCATGCCTAGCCTaGGAATACACATTTTTAAGA +
Preference number: 4 (lower is better)
Translates to: TGCVVVGIFPPLSLACRLPPCLA*EYTFLR
Trigger: TCTTAAAAATGTGTATTCCCAGGCTAGGCATGGTGG...CAACCTACATGCTAGAGAGAGAGGAGGAAATATACCCACGACCACACAGCCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR CCA 90 bp ACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTCAACTGGATACTAACTaGCTGTGTGGTCGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: TTNRRPLHGTTFIFRSRCQLDTN*LCGRGY
Trigger: ATACCCACGACCACACAGCCAGTTAGTATCCAGTTG...ACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR CCA 90 bp CTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTATCAAAGTGTCCTGCTGCGAGTaGGTGGAACAGAATGGGAGA +
Preference number: 4 (lower is better)
Translates to: LHGTTFIFRSRCYMAGIKVSCCE*VEQNGR
Trigger: TCTCCCATTCTGTTCCACCCACTCGCAGCAGGACAC...TTTGATACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341861.9
CDS-3UTR CCA 90 bp ATTACTACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTGTGAGAAGACAGGTGTaGCAGGAAAGGAAAGTGTCC +
Preference number: 4 (lower is better)
Translates to: ITTTNRRPLHGTTFIFRSVRRQV*QERKVS
Trigger: GGACACTTTCCTTTCCTGCCACACCTGTCTTCTCAC...ACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGTAGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341861.9
CDS-3UTR TCA 90 bp AAGATCCACAGAGTGACTGGGGCCCCAGCAATAGCAACCCTGAAGATATCTGACAATATACCAGCCTTCTaGCTTCATCAACTTGGATAT +
Preference number: 4 (lower is better)
Translates to: KIHRVTGAPAIATLKISDNIPAF*LHQLGY
Trigger: ATATCCAAGTTGATGAAGTCAGAAGGCTGGTATATT...GTCAGATATCTTCAGGGTTGCTATTGCTGGGGCCCCAGTCACTCTGTGGATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR TCA 90 bp AACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCCTGACTACGTACAGGTaGTGCTCTAAAGGGGAGTCT +
Preference number: 4 (lower is better)
Translates to: NLLIWLNSQCIPESSTQVLTTYR*CSKGES
Trigger: AGACTCCCCTTTAGAGCATCACCTGTACGTAGTCAG...GACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR TCA 90 bp TTACTGTGCAAAAGGAACATCGGATTCTCATCATTTCCCAAAGCAGCAGAAAGGCTGACTACGTACAGGTaGTGCTCTAAAGGGGAGTCT +
Preference number: 4 (lower is better)
Translates to: LLCKRNIGFSSFPKAAERLTTYR*CSKGES
Trigger: AGACTCCCCTTTAGAGCATCACCTGTACGTAGTCAG...CCTTTCTGCTGCTTTGGGAAATGATGAGAATCCGATGTTCCTTTTGCACAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR TCA 90 bp ACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTCAGGATTTACGTAACTaGCTACGTACAGGTGATGCT +
Preference number: 4 (lower is better)
Translates to: TTNRRPLHGTTFIFRSRCQDLRN*LRTGDA
Trigger: AGCATCACCTGTACGTAGTCAGTTACGTAAATCCTG...ACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR TCA 90 bp ACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGATTTACGTAACTaGCTACGTACAGGTGATGCT +
Preference number: 4 (lower is better)
Translates to: TVDPCMAPHLFSGVDVTWQDLRN*LRTGDA
Trigger: AGCATCACCTGTACGTAGTCAGTTACGTAAATCCTG...CCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR TCA 90 bp CTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCAAAGATGCAGCAAGAATGTaGGTAGCCACGGTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: LLIWLNSQCIPESSTQVKDAARM*VATVSQ
Trigger: CTGACTGACCGTGGCTACTCACATTCTTGCTGCATC...TTTGACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR TCA 90 bp CAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATTCACCAACTGCACCTaGGGACCACCATATATGAAC +
Preference number: 4 (lower is better)
Translates to: QTVDPCMAPHLFSGVDVTFTNCT*GPPYMN
Trigger: GTTCATATATGGTGGTCCTCAGGTGCAGTTGGTGAA...TGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
CDS-3UTR TCA 90 bp ACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGGAACTTTTCCTCCCCTaGATCATGTTACTCTGTAGC +
Preference number: 4 (lower is better)
Translates to: TVDPCMAPHLFSGVDVTWELFLP*IMLLCS
Trigger: GCTACAGAGTAACATGATTCAGGGGAGGAAAAGTTC...CCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR TCA 90 bp TGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTATCAAAATCTCCTGACTTCAAGTaGTTCACCCGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: CMAPHLFSGVDVTWQVSKSPDFK*FTRLGL
Trigger: GAGGCCAAGGCGGGTGAATCACTTGAAGTCAGGAGA...TTTTGATACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR TCA 90 bp ACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTAAAGGACTTATGAAATaGTCACCTAGAGCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: TTNRRPLHGTTFIFRSRCKGLMK*SPRAQD
Trigger: GTCCTGGGCTCTAGGTGATCATTTCATAAGTCCTTT...ACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR TCA 90 bp ACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACCCAGCAATAGCAACCTaGGGACCACCATATATGAAC +
Preference number: 4 (lower is better)
Translates to: TNRRPLHGTTFIFRSRCYPAIAT*GPPYMN
Trigger: GTTCATATATGGTGGTCCTCAGGTTGCTATTGCTGG...GTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358939.8
CDS-3UTR GCA 90 bp ACTGGCTGTGTGGTCGTGGGTATATTTCCTCCTCTCTCTCTAGCATGTAGGTTGTCCATAGTCCAGTGTTaGCTGAAAAAGATCCAAAAG +
Preference number: 4 (lower is better)
Translates to: TGCVVVGIFPPLSLACRLSIVQC*LKKIQK
Trigger: CTTTTGGATCTTTTTCAGGCAACACTGGACTATGGA...CAACCTACATGCTAGAGAGAGAGGAGGAAATATACCCACGACCACACAGCCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR GCA 90 bp ATTACTACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTGGCCTTAAAGGTTGTTaGGTAAATCCTTGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: ITTTNRRPLHGTTFIFRSGLKGC*VNPCGP
Trigger: AGGGCCACAAGGATTTACGCAACAACCTTTAAGGCC...ACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGTAGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR GCA 90 bp ACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTGGATATTAGATCCATaGCGGCCAAGAACTTCCCAT +
Preference number: 4 (lower is better)
Translates to: TTNRRPLHGTTFIFRSRCWILDP*RPRTSH
Trigger: ATGGGAAGTTCTTGGCCGGCATGGATCTAATATCCA...ACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR GCA 90 bp TGTAAGAGCAGTAAACGATTTGGTTCAGAGGGGAACTTTTCTGCTTGCATGGCCTGGATATTAGATCCATaGCGGCCAAGAACTTCCCAT +
Preference number: 4 (lower is better)
Translates to: CKSSKRFGSEGNFSACMAWILDP*RPRTSH
Trigger: ATGGGAAGTTCTTGGCCGGCATGGATCTAATATCCA...GGCCATGCAAGCAGAAAAGTTCCCCTCTGAACCAAATCGTTTACTGCTCTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR GCA 90 bp ACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTAAGGGGAGTCTTTGGTaGCTTCAAAATATACCAGCC +
Preference number: 4 (lower is better)
Translates to: TTNRRPLHGTTFIFRSRCKGSLW*LQNIPA
Trigger: GGCTGGTATATTTTGAAGGCACCAAAGACTCCCCTT...ACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR GCA 90 bp AATAGCTATAAAGATGGGCTCCCAGGCTTAAGCAAGCACTCTACTCTATATTCCAGAGGGGAACTTTTCTaGTTGCATGGCCACAGATCC +
Preference number: 4 (lower is better)
Translates to: NSYKDGLPGLSKHSTLYSRGELF*LHGHRS
Trigger: GGATCTGTGGCCATGCAAGCAGAAAAGTTCCCCTCT...GGAATATAGAGTAGAGTGCTTGCTTAAGCCTGGGAGCCCATCTTTATAGCTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR GCA 90 bp GTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGAAGAGAGCCATGGCTTaGCAGGGATTAGTTTATGGT +
Preference number: 4 (lower is better)
Translates to: VDPCMAPHLFSGVDVTWQKRAMA*QGLVYG
Trigger: ACCATAAACTAATCCCTGGCAAGCCATGGCTCTCTT...CTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR GCA 90 bp AATAGCTATAAAGATGGGCTCCCAGGCTTAAGCAAGCACTCTACTCTATATTCCCATAGATGCCTTCCCTaGCACTGGTGTCAATGTGAC +
Preference number: 4 (lower is better)
Translates to: NSYKDGLPGLSKHSTLYSHRCLP*HWCQCD
Trigger: GTCACATTGACACCAGTGGCAGGGAAGGCATCTATG...GGAATATAGAGTAGAGTGCTTGCTTAAGCCTGGGAGCCCATCTTTATAGCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR GCA 90 bp CAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACACATCAAACTCATAGATaGCTTCCCTGCCACTGGTGT +
Preference number: 4 (lower is better)
Translates to: QTVDPCMAPHLFSGVDVTHQTHR*LPCHWC
Trigger: ACACCAGTGGCAGGGAAGGCATCTATGAGTTTGATG...TGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR GCA 90 bp GAAACAGCCTTAATGGGTGAGAGGTTTCAATGGAGTAGCTGCTTAAAAGCTACTAACAACATCTCCTGCTaGTTTCAGAGTGAGACGGGG +
Preference number: 4 (lower is better)
Translates to: ETALMGERFQWSSCLKATNNISC*FQSETG
Trigger: CCCCGTCTCACTCTGAAAGCAGCAGGAGATGTTGTT...AGTAGCTTTTAAGCAGCTACTCCATTGAAACCTCTCACCCATTAAGGCTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR GCA 90 bp AGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTGTAAACAACATCTCCTaGTGCTTTCAGAGTGAGACG +
Preference number: 4 (lower is better)
Translates to: RPLHGTTFIFRSRCYMAGVNNIS*CFQSET
Trigger: CGTCTCACTCTGAAAGCAGCAGGAGATGTTGTTTAC...ACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR GCA 90 bp CTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTATCAAAGAAAGGAAAGTGTCCTaGTGCGAGTGGGTGGAACAG +
Preference number: 4 (lower is better)
Translates to: LHGTTFIFRSRCYMAGIKERKVS*CEWVEQ
Trigger: CTGTTCCACCCACTCGCAGCAGGACACTTTCCTTTC...TTTGATACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341861.9
CDS-3UTR GCA 90 bp ACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGAAAACAGCGAGGTTATaGCAGCACAGCAACAATGGA +
Preference number: 4 (lower is better)
Translates to: TVDPCMAPHLFSGVDVTWKTARL*QHSNNG
Trigger: TCCATTGTTGCTGTGCTGGCATAACCTCGCTGTTTT...CCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341861.9
CDS-3UTR CCA 90 bp AGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTTTGCGTAAATCCTTGTaGCCCTCCATCTTTTACGTG +
Preference number: 4 (lower is better)
Translates to: RPLHGTTFIFRSRCYMAGLRKSL*PSIFYV
Trigger: CACGTAAAAGATGGAGGGCCACAAGGATTTACGCAA...ACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CCA 90 bp TATAAAGATGGGCTCCCAGGCTTAAGCAAGCACTCTACTCTATATTCCAATCCTCGACTCCAGCTGATCTaGCATCTTCTTCCATGTTGG +
Preference number: 4 (lower is better)
Translates to: YKDGLPGLSKHSTLYSNPRLQLI*HLLPCW
Trigger: CCAACATGGAAGAAGATGCCAGATCAGCTGGAGTCG...AGGATTGGAATATAGAGTAGAGTGCTTGCTTAAGCCTGGGAGCCCATCTTTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR CCA 90 bp TCATCCAGGAAACCATGTAAGAGCAGTAAACGATTTGGTTCAGAGGGGAACTTTCGACTCCAGCTGATCTaGCATCTTCTTCCATGTTGG +
Preference number: 4 (lower is better)
Translates to: SSRKPCKSSKRFGSEGNFRLQLI*HLLPCW
Trigger: CCAACATGGAAGAAGATGCCAGATCAGCTGGAGTCG...AAAGTTCCCCTCTGAACCAAATCGTTTACTGCTCTTACATGGTTTCCTGGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR CCA 90 bp TATAAAGATGGGCTCCCAGGCTTAAGCAAGCACTCTACTCTATATTCCAATCCTATCTGTAGGCGAGTCTaGGAGCGATCTAGTAGGATG +
Preference number: 4 (lower is better)
Translates to: YKDGLPGLSKHSTLYSNPICRRV*ERSSRM
Trigger: CATCCTACTAGATCGCTCCCAGACTCGCCTACAGAT...AGGATTGGAATATAGAGTAGAGTGCTTGCTTAAGCCTGGGAGCCCATCTTTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR CCA 90 bp AACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCATCTGTAGGCGAGTCTaGGAGCGATCTAGTAGGATG +
Preference number: 4 (lower is better)
Translates to: NLLIWLNSQCIPESSTQVICRRV*ERSSRM
Trigger: CATCCTACTAGATCGCTCCCAGACTCGCCTACAGAT...GACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CCA 90 bp ACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGCAGCCCACCACTaGATCGTTTATATTTGCTTT +
Preference number: 4 (lower is better)
Translates to: TVDPCMAPHLFSGVDVTWQAAHH*IVYICF
Trigger: AAAGCAAATATAAACGATCCAGTGGTGGGCTGCCTG...CCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CCA 90 bp ATTACTACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGGCTGTGCTCTCTATaGGGAAATCTACTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: ITTTNRRPLHGTTFIFRSRLCSL*GNLLSL
Trigger: CAGAGAGAGTAGATTTCCCCATAGAGAGCACAGCCT...ACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGTAGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR CCA 90 bp GTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTCTGTGGCAGGACACCTGGCTaGAGTCCAGCACCAACTGGA +
Preference number: 4 (lower is better)
Translates to: VDVTWQVSKCDDQFCVFCGRTPG*SPAPTG
Trigger: TCCAGTTGGTGCTGGACTCCAGCCAGGTGTCCTGCC...ACAGAAAACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR TCA 90 bp AGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTTTTAGGCCGATCCTGTaGTTCAATATTCTCCTCACA +
Preference number: 4 (lower is better)
Translates to: RPLHGTTFIFRSRCYMAGFRPIL*FNILLT
Trigger: TGTGAGGAGAATATTGAATCACAGGATCGGCCTAAA...ACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR TCA 90 bp ACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTGTAATAGATTCTGTCTaGATGAGGTCCATCTGGATC +
Preference number: 4 (lower is better)
Translates to: TTNRRPLHGTTFIFRSRCVIDSV*MRSIWI
Trigger: GATCCAGATGGACCTCATTCAGACAGAATCTATTAC...ACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR TCA 90 bp GTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGTTTAGGATAACGGAATaGATCTGCCCTCCTTGTTTC +
Preference number: 4 (lower is better)
Translates to: VDPCMAPHLFSGVDVTWQFRITE*ICPPCF
Trigger: GAAACAAGGAGGGCAGATTCATTCCGTTATCCTAAA...CTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR TCA 90 bp CTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCAAACTGACTACGTACAGGTaGTGCTCTAAAGGGGAGTCT +
Preference number: 4 (lower is better)
Translates to: LLIWLNSQCIPESSTQVKLTTYR*CSKGES
Trigger: AGACTCCCCTTTAGAGCATCACCTGTACGTAGTCAG...TTTGACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR TCA 90 bp ATTACTACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTCAGGATTTACGTAACTaGCTACGTACAGGTGATGCT +
Preference number: 4 (lower is better)
Translates to: ITTTNRRPLHGTTFIFRSQDLRN*LRTGDA
Trigger: AGCATCACCTGTACGTAGTCAGTTACGTAAATCCTG...ACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGTAGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR TCA 90 bp AACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCAGTCACAGTGCTGACTaGTGCAGCAAGAATGTGAGT +
Preference number: 4 (lower is better)
Translates to: NLLIWLNSQCIPESSTQVSHSAD*CSKNVS
Trigger: ACTCACATTCTTGCTGCATCAGTCAGCACTGTGACT...GACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR TCA 90 bp AACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCTTCACCAACTGCACCTaGGGACCACCATATATGAAC +
Preference number: 4 (lower is better)
Translates to: NLLIWLNSQCIPESSTQVFTNCT*GPPYMN
Trigger: GTTCATATATGGTGGTCCTCAGGTGCAGTTGGTGAA...GACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000395652.7
ENST00000559233.5
CDS-3UTR TCA 90 bp GAAACAGCCTTAATGGGTGAGAGGTTTCAATGGAGTAGCTGCTTAAAAGCTACTCCCACTTGGTGTCAATaGAGTCCACCTCTTACCAAT +
Preference number: 4 (lower is better)
Translates to: ETALMGERFQWSSCLKATPTWCQ*SPPLTN
Trigger: ATTGGTAAGAGGTGGACTTCATTGACACCAAGTGGG...AGTAGCTTTTAAGCAGCTACTCCATTGAAACCTCTCACCCATTAAGGCTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR TCA 90 bp GTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGAAAGGAAAACACCTGTaGACTCCAGAGTACATGAAG +
Preference number: 4 (lower is better)
Translates to: VDPCMAPHLFSGVDVTWQKGKHL*TPEYMK
Trigger: CTTCATGTACTCTGGAGTTCACAGGTGTTTTCCTTT...CTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR GCA 90 bp AGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTCTGTTCTGTTTCCATTaGTGCTGCCATGTTGCATTT +
Preference number: 4 (lower is better)
Translates to: RPLHGTTFIFRSRCYMAGLFCFH*CCHVAF
Trigger: AAATGCAACATGGCAGCAGCAATGGAAACAGAACAG...ACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR GCA 90 bp GAAACAGCCTTAATGGGTGAGAGGTTTCAATGGAGTAGCTGCTTAAAAGCTACTGGCCTTAAAGGTTGTTaGGTAAATCCTTGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: ETALMGERFQWSSCLKATGLKGC*VNPCGP
Trigger: AGGGCCACAAGGATTTACGCAACAACCTTTAAGGCC...AGTAGCTTTTAAGCAGCTACTCCATTGAAACCTCTCACCCATTAAGGCTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR GCA 90 bp TTCATTCTGGTCAGGGTGACCCATATAACGTTCCGTGTATCCTGTATCATAGAAGGCCTTAAAGGTTGTTaGGTAAATCCTTGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: FILVRVTHITFRVSCIIEGLKGC*VNPCGP
Trigger: AGGGCCACAAGGATTTACGCAACAACCTTTAAGGCC...TTCTATGATACAGGATACACGGAACGTTATATGGGTCACCCTGACCAGAATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR GCA 90 bp AAGATCCACAGAGTGACTGGGGCCCCAGCAATAGCAACCCTGAAGATATCTGACAGTGACTTTAGGATTTaGTGTACCTGTTTTAGGATA +
Preference number: 4 (lower is better)
Translates to: KIHRVTGAPAIATLKISDSDFRI*CTCFRI
Trigger: TATCCTAAAACAGGTACAGCAAATCCTAAAGTCACT...GTCAGATATCTTCAGGGTTGCTATTGCTGGGGCCCCAGTCACTCTGTGGATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR GCA 90 bp ACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACTGGATATTAGATCCATaGCGGCCAAGAACTTCCCAT +
Preference number: 4 (lower is better)
Translates to: TNRRPLHGTTFIFRSRCYWILDP*RPRTSH
Trigger: ATGGGAAGTTCTTGGCCGGCATGGATCTAATATCCA...GTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR GCA 90 bp TTAAACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGAGGACCAGCCGTGGATaGCCACACGATCTAAGTCAA +
Preference number: 4 (lower is better)
Translates to: LNLLIWLNSQCIPESSTQRTSRG*PHDLSQ
Trigger: TTGACTTAGATCGTGTGGGCATCCACGGCTGGTCCT...CTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000341861.9
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR GCA 90 bp GTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGAAGATATCTGACCTCTaGATTAATGCCATCAGGGAG +
Preference number: 4 (lower is better)
Translates to: VDPCMAPHLFSGVDVTWQKISDL*INAIRE
Trigger: CTCCCTGATGGCATTAATGCAGAGGTCAGATATCTT...CTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300141.11
ENST00000341861.9
ENST00000558786.5
CDS-3UTR GCA 90 bp GAAACAGCCTTAATGGGTGAGAGGTTTCAATGGAGTAGCTGCTTAAAAGCTACTGGGAACTTTTCTGCTTaGATGGCCACAGATCCTAAG +
Preference number: 4 (lower is better)
Translates to: ETALMGERFQWSSCLKATGNFSA*MATDPK
Trigger: CTTAGGATCTGTGGCCATGCAAGCAGAAAAGTTCCC...AGTAGCTTTTAAGCAGCTACTCCATTGAAACCTCTCACCCATTAAGGCTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR GCA 90 bp AACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCGGGAACTTTTCTGCTTaGATGGCCACAGATCCTAAG +
Preference number: 4 (lower is better)
Translates to: NLLIWLNSQCIPESSTQVGNFSA*MATDPK
Trigger: CTTAGGATCTGTGGCCATGCAAGCAGAAAAGTTCCC...GACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR GCA 90 bp ATTAGATTACTACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAAGAGGGGAACTTTTCTaGTTGCATGGCCACAGATCC +
Preference number: 4 (lower is better)
Translates to: IRLLPQTVDPCMAPHLFSRGELF*LHGHRS
Trigger: GGATCTGTGGCCATGCAAGCAGAAAAGTTCCCCTCT...TGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGTAGTAATCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR GCA 90 bp ATTACTACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTCAAACCGTAGACCCCTaGATGGCACCACATTTATTT +
Preference number: 4 (lower is better)
Translates to: ITTTNRRPLHGTTFIFRSQTVDP*MAPHLF
Trigger: AAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTG...ACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGTAGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR GCA 90 bp GAAACAGCCTTAATGGGTGAGAGGTTTCAATGGAGTAGCTGCTTAAAAGCTACTCATCAAACTCATAGATaGCTTCCCTGCCACTGGTGT +
Preference number: 4 (lower is better)
Translates to: ETALMGERFQWSSCLKATHQTHR*LPCHWC
Trigger: ACACCAGTGGCAGGGAAGGCATCTATGAGTTTGATG...AGTAGCTTTTAAGCAGCTACTCCATTGAAACCTCTCACCCATTAAGGCTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR GCA 90 bp ATTAGATTACTACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAAACAACATCTCCTGCTaGTTTCAGAGTGAGACGGGG +
Preference number: 4 (lower is better)
Translates to: IRLLPQTVDPCMAPHLFSNNISC*FQSETG
Trigger: CCCCGTCTCACTCTGAAAGCAGCAGGAGATGTTGTT...TGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGTAGTAATCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR GCA 90 bp CTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCAAAAGGAAAGTGTCCTGCTaGGAGTGGGTGGAACAGAAT +
Preference number: 4 (lower is better)
Translates to: LLIWLNSQCIPESSTQVKRKVSC*EWVEQN
Trigger: ATTCTGTTCCACCCACTCGCAGCAGGACACTTTCCT...TTTGACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341861.9
CDS-3UTR GCA 90 bp ACTGGCTGTGTGGTCGTGGGTATATTTCCTCCTCTCTCTCTAGCATGTAGGTTGGTTACAGGCCATTTTTaGAGAAAGGGAATTAACTTG +
Preference number: 4 (lower is better)
Translates to: TGCVVVGIFPPLSLACRLVTGHF*RKGINL
Trigger: CAAGTTAATTCCCTTTCTGCAAAAATGGCCTGTAAC...CAACCTACATGCTAGAGAGAGAGGAGGAAATATACCCACGACCACACAGCCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341861.9
CDS-3UTR CCA 90 bp ACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACTTGCGTAAATCCTTGTaGCCCTCCATCTTTTACGTG +
Preference number: 4 (lower is better)
Translates to: TNRRPLHGTTFIFRSRCYLRKSL*PSIFYV
Trigger: CACGTAAAAGATGGAGGGCCACAAGGATTTACGCAA...GTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CCA 90 bp GTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGCATCTTCTTCCATGTTaGCTAGCTCATTGTGCACAT +
Preference number: 4 (lower is better)
Translates to: VDPCMAPHLFSGVDVTWQHLLPC*LAHCAH
Trigger: ATGTGCACAATGAGCTAGCCAACATGGAAGAAGATG...CTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CCA 90 bp GTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGAGTCCATCCAGCTCTaGCAATATATTCAACTCCTT +
Preference number: 4 (lower is better)
Translates to: VDPCMAPHLFSGVDVTWQESIQL*QYIQLL
Trigger: AAGGAGTTGAATATATTGCCAGAGCTGGATGGACTC...CTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CCA 90 bp ACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTAGCGATCTAGTAGGATaGACCAAGCATATTTTCCCT +
Preference number: 4 (lower is better)
Translates to: TTNRRPLHGTTFIFRSRCSDLVG*TKHIFP
Trigger: AGGGAAAATATGCTTGGTCCATCCTACTAGATCGCT...ACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CCA 90 bp CTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTATCAAAATCTGTAGGCGAGTCTaGGAGCGATCTAGTAGGATG +
Preference number: 4 (lower is better)
Translates to: LHGTTFIFRSRCYMAGIKICRRV*ERSSRM
Trigger: CATCCTACTAGATCGCTCCCAGACTCGCCTACAGAT...TTTGATACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CCA 90 bp ATTACTACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTCAGGCAGCCCACCACTaGATCGTTTATATTTGCTTT +
Preference number: 4 (lower is better)
Translates to: ITTTNRRPLHGTTFIFRSQAAHH*IVYICF
Trigger: AAAGCAAATATAAACGATCCAGTGGTGGGCTGCCTG...ACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGTAGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CCA 90 bp CTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCAAAACACTTGAAATCACTTaGAGCAGGCAGCCCACCACT +
Preference number: 4 (lower is better)
Translates to: LLIWLNSQCIPESSTQVKTLEIT*SRQPTT
Trigger: AGTGGTGGGCTGCCTGCTCCAAGTGATTTCAAGTGT...TTTGACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CCA 90 bp ACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTCTGCTGAATCCAAAATaGTGGCCCAAAATTCCTTTG +
Preference number: 4 (lower is better)
Translates to: TTNRRPLHGTTFIFRSRCLLNPK*WPKIPL
Trigger: CAAAGGAATTTTGGGCCACCATTTTGGATTCAGCAG...ACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR CCA 90 bp AGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTGCTAAAGAAGCAGAATaGCATTTAAGTGACTGGGAG +
Preference number: 4 (lower is better)
Translates to: RPLHGTTFIFRSRCYMAGAKEAE*HLSDWE
Trigger: CTCCCAGTCACTTAAATGCCATTCTGCTTCTTTAGC...ACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR CCA 90 bp GAAACAGCCTTAATGGGTGAGAGGTTTCAATGGAGTAGCTGCTTAAAAGCTACTCAACTGGATACTAACTaGCTGTGTGGTCGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: ETALMGERFQWSSCLKATQLDTN*LCGRGY
Trigger: ATACCCACGACCACACAGCCAGTTAGTATCCAGTTG...AGTAGCTTTTAAGCAGCTACTCCATTGAAACCTCTCACCCATTAAGGCTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR TCA 90 bp CAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACAGTAATAGATTCTGTCTaGATGAGGTCCATCTGGATC +
Preference number: 4 (lower is better)
Translates to: QTVDPCMAPHLFSGVDVTVIDSV*MRSIWI
Trigger: GATCCAGATGGACCTCATTCAGACAGAATCTATTAC...TGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR TCA 90 bp AACTGCCTTACTGTGCAAAAGGAACATCGGATTCTCATCATTTCCCAAAGCAGCGTAATAGATTCTGTCTaGATGAGGTCCATCTGGATC +
Preference number: 4 (lower is better)
Translates to: NCLTVQKEHRILIISQSSVIDSV*MRSIWI
Trigger: GATCCAGATGGACCTCATTCAGACAGAATCTATTAC...GCTGCTTTGGGAAATGATGAGAATCCGATGTTCCTTTTGCACAGTAAGGCAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR TCA 90 bp ACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATTCCACTACCGGCTTaGAACAGAAATGTTCCACTT +
Preference number: 4 (lower is better)
Translates to: TNRRPLHGTTFIFRSRCYIPLPA*NRNVPL
Trigger: AAGTGGAACATTTCTGTTTCAAGCCGGTAGTGGAAT...GTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR TCA 90 bp GAAACAGCCTTAATGGGTGAGAGGTTTCAATGGAGTAGCTGCTTAAAAGCTACTCAGGATTTACGTAACTaGCTACGTACAGGTGATGCT +
Preference number: 4 (lower is better)
Translates to: ETALMGERFQWSSCLKATQDLRN*LRTGDA
Trigger: AGCATCACCTGTACGTAGTCAGTTACGTAAATCCTG...AGTAGCTTTTAAGCAGCTACTCCATTGAAACCTCTCACCCATTAAGGCTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR TCA 90 bp TCAGGAGTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTGATGCAGCAAGAATGTaGGTAGCCACGGTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: SGVDVTWQVSKCDDQFCVDAARM*VATVSQ
Trigger: CTGACTGACCGTGGCTACTCACATTCTTGCTGCATC...AACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTACTCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR TCA 90 bp CTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCAAAAGTCACAGTGCTGACTaGTGCAGCAAGAATGTGAGT +
Preference number: 4 (lower is better)
Translates to: LLIWLNSQCIPESSTQVKSHSAD*CSKNVS
Trigger: ACTCACATTCTTGCTGCATCAGTCAGCACTGTGACT...TTTGACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR GCA 90 bp ACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGGACTCAATGAGTCTCTaGCTTTCCATAACATCATCT +
Preference number: 4 (lower is better)
Translates to: TVDPCMAPHLFSGVDVTWDSMSL*LSITSS
Trigger: AGATGATGTTATGGAAAGGCAGAGACTCATTGAGTC...CCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR GCA 90 bp ACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTGACTCAATGAGTCTCTaGCTTTCCATAACATCATCT +
Preference number: 4 (lower is better)
Translates to: TTNRRPLHGTTFIFRSRCDSMSL*LSITSS
Trigger: AGATGATGTTATGGAAAGGCAGAGACTCATTGAGTC...ACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR GCA 90 bp TTGACCTCAGCATGTCCAATAACACTGGCAAACACAGTAACTGCCTTACTGTGCGACTCAATGAGTCTCTaGCTTTCCATAACATCATCT +
Preference number: 4 (lower is better)
Translates to: LTSACPITLANTVTALLCDSMSL*LSITSS
Trigger: AGATGATGTTATGGAAAGGCAGAGACTCATTGAGTC...GCACAGTAAGGCAGTTACTGTGTTTGCCAGTGTTATTGGACATGCTGAGGTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR GCA 90 bp AACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCAAGGGGAGTCTTTGGTaGCTTCAAAATATACCAGCC +
Preference number: 4 (lower is better)
Translates to: NLLIWLNSQCIPESSTQVKGSLW*LQNIPA
Trigger: GGCTGGTATATTTTGAAGGCACCAAAGACTCCCCTT...GACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR GCA 90 bp TCAGGAGTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTAGGACCAGCCGTGGATaGCCACACGATCTAAGTCAA +
Preference number: 4 (lower is better)
Translates to: SGVDVTWQVSKCDDQFCVRTSRG*PHDLSQ
Trigger: TTGACTTAGATCGTGTGGGCATCCACGGCTGGTCCT...AACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTACTCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000341861.9
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR GCA 90 bp CAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACAAAGATATCTGACCTCTaGATTAATGCCATCAGGGAG +
Preference number: 4 (lower is better)
Translates to: QTVDPCMAPHLFSGVDVTKISDL*INAIRE
Trigger: CTCCCTGATGGCATTAATGCAGAGGTCAGATATCTT...TGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300141.11
ENST00000341861.9
ENST00000558786.5
CDS-3UTR GCA 90 bp TTAAACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGAGAGGGGAACTTTTCTaGTTGCATGGCCACAGATCC +
Preference number: 4 (lower is better)
Translates to: LNLLIWLNSQCIPESSTQRGELF*LHGHRS
Trigger: GGATCTGTGGCCATGCAAGCAGAAAAGTTCCCCTCT...CTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR GCA 90 bp AATAGCTATAAAGATGGGCTCCCAGGCTTAAGCAAGCACTCTACTCTATATTCCCAAACCGTAGACCCCTaGATGGCACCACATTTATTT +
Preference number: 4 (lower is better)
Translates to: NSYKDGLPGLSKHSTLYSQTVDP*MAPHLF
Trigger: AAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTG...GGAATATAGAGTAGAGTGCTTGCTTAAGCCTGGGAGCCCATCTTTATAGCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR GCA 90 bp AATAGCTATAAAGATGGGCTCCCAGGCTTAAGCAAGCACTCTACTCTATATTCCAAGAGAGCCATGGCTTaGCAGGGATTAGTTTATGGT +
Preference number: 4 (lower is better)
Translates to: NSYKDGLPGLSKHSTLYSKRAMA*QGLVYG
Trigger: ACCATAAACTAATCCCTGGCAAGCCATGGCTCTCTT...GGAATATAGAGTAGAGTGCTTGCTTAAGCCTGGGAGCCCATCTTTATAGCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR GCA 90 bp CTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTATCAAATCCCTCTGCTCATCCTaGTCTTCTCACAGGAATCTT +
Preference number: 4 (lower is better)
Translates to: LHGTTFIFRSRCYMAGIKSLCSS*SSHRNL
Trigger: AAGATTCCTGTGAGAAGAGCAGGATGAGCAGAGGGA...TTTGATACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321147.10
ENST00000341861.9
CDS-3UTR GCA 90 bp ACTGGCTGTGTGGTCGTGGGTATATTTCCTCCTCTCTCTCTAGCATGTAGGTTGTTGCTGCTGCCATGTTaGATTTTCCTGATTTTATTT +
Preference number: 4 (lower is better)
Translates to: TGCVVVGIFPPLSLACRLLLLPC*IFLILF
Trigger: AAATAAAATCAGGAAAATGCAACATGGCAGCAGCAA...CAACCTACATGCTAGAGAGAGAGGAGGAAATATACCCACGACCACACAGCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341861.9
CDS-3UTR GCA 90 bp TCTCATCCAGGAAACCATGTAAGAGCAGTAAACGATTTGGTTCAGAGGGGAACTGGCAAACACAGTAACTaGCTTACTGTGCAAAAGGAA +
Preference number: 4 (lower is better)
Translates to: SHPGNHVRAVNDLVQRGTGKHSN*LTVQKE
Trigger: TTCCTTTTGCACAGTAAGGCAGTTACTGTGTTTGCC...AGTTCCCCTCTGAACCAAATCGTTTACTGCTCTTACATGGTTTCCTGGATGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR CCA 90 bp ACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTAGCCATGATATTTTCTaGTATCGGCAAGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: TTNRRPLHGTTFIFRSRCSHDIF*YRQAAF
Trigger: AAAAGCTGCTTGCCGATACCAGAAAATATCATGGCT...ACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CCA 90 bp AACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCTTGCGTAAATCCTTGTaGCCCTCCATCTTTTACGTG +
Preference number: 4 (lower is better)
Translates to: NLLIWLNSQCIPESSTQVLRKSL*PSIFYV
Trigger: CACGTAAAAGATGGAGGGCCACAAGGATTTACGCAA...GACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CCA 90 bp TTAAACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGCGACTCCAGCTGATCTaGCATCTTCTTCCATGTTGG +
Preference number: 4 (lower is better)
Translates to: LNLLIWLNSQCIPESSTQRLQLI*HLLPCW
Trigger: CCAACATGGAAGAAGATGCCAGATCAGCTGGAGTCG...CTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CCA 90 bp GTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGAATTTTACCACCACTaGGAGTTGTTTCAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: VDPCMAPHLFSGVDVTWQEFYHH*ELFQLL
Trigger: CAAAAGCTGAAACAACTCCCAGTGGTGGTAAAATTC...CTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CCA 90 bp CAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACAGAGTCCATCCAGCTCTaGCAATATATTCAACTCCTT +
Preference number: 4 (lower is better)
Translates to: QTVDPCMAPHLFSGVDVTESIQL*QYIQLL
Trigger: AAGGAGTTGAATATATTGCCAGAGCTGGATGGACTC...TGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CCA 90 bp ATTACTACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGCGATCTAGTAGGATaGACCAAGCATATTTTCCCT +
Preference number: 4 (lower is better)
Translates to: ITTTNRRPLHGTTFIFRSSDLVG*TKHIFP
Trigger: AGGGAAAATATGCTTGGTCCATCCTACTAGATCGCT...ACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGTAGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CCA 90 bp TTAAACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGATCTGTAGGCGAGTCTaGGAGCGATCTAGTAGGATG +
Preference number: 4 (lower is better)
Translates to: LNLLIWLNSQCIPESSTQICRRV*ERSSRM
Trigger: CATCCTACTAGATCGCTCCCAGACTCGCCTACAGAT...CTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CCA 90 bp AACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCCAGGCAGCCCACCACTaGATCGTTTATATTTGCTTT +
Preference number: 4 (lower is better)
Translates to: NLLIWLNSQCIPESSTQVQAAHH*IVYICF
Trigger: AAAGCAAATATAAACGATCCAGTGGTGGGCTGCCTG...GACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CCA 90 bp TTAAACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGACACTTGAAATCACTTaGAGCAGGCAGCCCACCACT +
Preference number: 4 (lower is better)
Translates to: LNLLIWLNSQCIPESSTQTLEIT*SRQPTT
Trigger: AGTGGTGGGCTGCCTGCTCCAAGTGATTTCAAGTGT...CTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CCA 90 bp TGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTATCAAAAACACTTGAAATCACTTaGAGCAGGCAGCCCACCACT +
Preference number: 4 (lower is better)
Translates to: CMAPHLFSGVDVTWQVSKTLEIT*SRQPTT
Trigger: AGTGGTGGGCTGCCTGCTCCAAGTGATTTCAAGTGT...TTTTGATACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CCA 90 bp ACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTCTAAAGGGGAGTCTTTaGTGCCTTCAAAATATACCA +
Preference number: 4 (lower is better)
Translates to: TTNRRPLHGTTFIFRSRCLKGSL*CLQNIP
Trigger: TGGTATATTTTGAAGGCACCAAAGACTCCCCTTTAG...ACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CCA 90 bp ACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTAAGGGACACACAGTGTaGATTCTTCTGGTTACTATA +
Preference number: 4 (lower is better)
Translates to: TTNRRPLHGTTFIFRSRCKGHTV*ILLVTI
Trigger: TATAGTAACCAGAAGAATCCACACTGTGTGTCCCTT...ACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR CCA 90 bp GTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTCTGTGATCCACAGAGTGACTaGGGCCCCAGCAATAGCAAC +
Preference number: 4 (lower is better)
Translates to: VDVTWQVSKCDDQFCVFCDPQSD*GPSNSN
Trigger: GTTGCTATTGCTGGGGCCCCAGTCACTCTGTGGATC...ACAGAAAACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR CCA 90 bp GTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGACTTTTCTGCTTGCATaGCCACAGATCCTAAGTAAT +
Preference number: 4 (lower is better)
Translates to: VDPCMAPHLFSGVDVTWQTFLLA*PQILSN
Trigger: ATTACTTAGGATCTGTGGCCATGCAAGCAGAAAAGT...CTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR CCA 90 bp AGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTAACTATCCCTCTGGATaGTTGTTCAAGTGTACACAT +
Preference number: 4 (lower is better)
Translates to: RPLHGTTFIFRSRCYMAGNYPSG*LFKCTH
Trigger: ATGTGTACACTTGAACAACCATCCAGAGGGATAGTT...ACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR TCA 90 bp AATAGCTATAAAGATGGGCTCCCAGGCTTAAGCAAGCACTCTACTCTATATTCCGTAATAGATTCTGTCTaGATGAGGTCCATCTGGATC +
Preference number: 4 (lower is better)
Translates to: NSYKDGLPGLSKHSTLYSVIDSV*MRSIWI
Trigger: GATCCAGATGGACCTCATTCAGACAGAATCTATTAC...GGAATATAGAGTAGAGTGCTTGCTTAAGCCTGGGAGCCCATCTTTATAGCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR TCA 90 bp GAAACAGCCTTAATGGGTGAGAGGTTTCAATGGAGTAGCTGCTTAAAAGCTACTATTCCACTACCGGCTTaGAACAGAAATGTTCCACTT +
Preference number: 4 (lower is better)
Translates to: ETALMGERFQWSSCLKATIPLPA*NRNVPL
Trigger: AAGTGGAACATTTCTGTTTCAAGCCGGTAGTGGAAT...AGTAGCTTTTAAGCAGCTACTCCATTGAAACCTCTCACCCATTAAGGCTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR TCA 90 bp AACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCATTCCACTACCGGCTTaGAACAGAAATGTTCCACTT +
Preference number: 4 (lower is better)
Translates to: NLLIWLNSQCIPESSTQVIPLPA*NRNVPL
Trigger: AAGTGGAACATTTCTGTTTCAAGCCGGTAGTGGAAT...GACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR TCA 90 bp GTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTCTGTGGTAGCGACTCCAGCTaGTCTGGCATCTTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: VDVTWQVSKCDDQFCVFCGSDSS*SGIFFH
Trigger: ATGGAAGAAGATGCCAGATCAGCTGGAGTCGCTACC...ACAGAAAACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR TCA 90 bp AACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCTTTAGGATAACGGAATaGATCTGCCCTCCTTGTTTC +
Preference number: 4 (lower is better)
Translates to: NLLIWLNSQCIPESSTQVFRITE*ICPPCF
Trigger: GAAACAAGGAGGGCAGATTCATTCCGTTATCCTAAA...GACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR TCA 90 bp TCAGGAGTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTCTGACTACGTACAGGTaGTGCTCTAAAGGGGAGTCT +
Preference number: 4 (lower is better)
Translates to: SGVDVTWQVSKCDDQFCVLTTYR*CSKGES
Trigger: AGACTCCCCTTTAGAGCATCACCTGTACGTAGTCAG...AACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTACTCCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR TCA 90 bp CTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCAAACAGGATTTACGTAACTaGCTACGTACAGGTGATGCT +
Preference number: 4 (lower is better)
Translates to: LLIWLNSQCIPESSTQVKQDLRN*LRTGDA
Trigger: AGCATCACCTGTACGTAGTCAGTTACGTAAATCCTG...TTTGACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR TCA 90 bp TTAAACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGAGTCACAGTGCTGACTaGTGCAGCAAGAATGTGAGT +
Preference number: 4 (lower is better)
Translates to: LNLLIWLNSQCIPESSTQSHSAD*CSKNVS
Trigger: ACTCACATTCTTGCTGCATCAGTCAGCACTGTGACT...CTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR TCA 90 bp TGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTATCAAAAAGTCACAGTGCTGACTaGTGCAGCAAGAATGTGAGT +
Preference number: 4 (lower is better)
Translates to: CMAPHLFSGVDVTWQVSKSHSAD*CSKNVS
Trigger: ACTCACATTCTTGCTGCATCAGTCAGCACTGTGACT...TTTTGATACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR TCA 90 bp CTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTATCAAAGCACCTGAAAGCCTATaGGCTCTCTTCATAGCTAAA +
Preference number: 4 (lower is better)
Translates to: LHGTTFIFRSRCYMAGIKAPESL*ALFIAK
Trigger: TTTAGCTATGAAGAGAGCTCATAGGCTTTCAGGTGC...TTTGATACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR TCA 90 bp AACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCCCTAATCCTCTTGTATaGGGCTTTGGAAAAGAACCA +
Preference number: 4 (lower is better)
Translates to: NLLIWLNSQCIPESSTQVPNPLV*GFGKEP
Trigger: TGGTTCTTTTCCAAAGCCTCATACAAGAGGATTAGG...GACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR GCA 90 bp AATAGCTATAAAGATGGGCTCCCAGGCTTAAGCAAGCACTCTACTCTATATTCCCTGTTCTGTTTCCATTaGTGCTGCCATGTTGCATTT +
Preference number: 4 (lower is better)
Translates to: NSYKDGLPGLSKHSTLYSLFCFH*CCHVAF
Trigger: AAATGCAACATGGCAGCAGCAATGGAAACAGAACAG...GGAATATAGAGTAGAGTGCTTGCTTAAGCCTGGGAGCCCATCTTTATAGCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR GCA 90 bp TTAAACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGGCCTTAAAGGTTGTTaGGTAAATCCTTGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: LNLLIWLNSQCIPESSTQGLKGC*VNPCGP
Trigger: AGGGCCACAAGGATTTACGCAACAACCTTTAAGGCC...CTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR GCA 90 bp CAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACAGACTCAATGAGTCTCTaGCTTTCCATAACATCATCT +
Preference number: 4 (lower is better)
Translates to: QTVDPCMAPHLFSGVDVTDSMSL*LSITSS
Trigger: AGATGATGTTATGGAAAGGCAGAGACTCATTGAGTC...TGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR GCA 90 bp CTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCAAATGGATATTAGATCCATaGCGGCCAAGAACTTCCCAT +
Preference number: 4 (lower is better)
Translates to: LLIWLNSQCIPESSTQVKWILDP*RPRTSH
Trigger: ATGGGAAGTTCTTGGCCGGCATGGATCTAATATCCA...TTTGACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR GCA 90 bp CTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTATCAAAAAGGGGAGTCTTTGGTaGCTTCAAAATATACCAGCC +
Preference number: 4 (lower is better)
Translates to: LHGTTFIFRSRCYMAGIKKGSLW*LQNIPA
Trigger: GGCTGGTATATTTTGAAGGCACCAAAGACTCCCCTT...TTTGATACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR GCA 90 bp TTCATTCTGGTCAGGGTGACCCATATAACGTTCCGTGTATCCTGTATCATAGAAAAGATATCTGACCTCTaGATTAATGCCATCAGGGAG +
Preference number: 4 (lower is better)
Translates to: FILVRVTHITFRVSCIIEKISDL*INAIRE
Trigger: CTCCCTGATGGCATTAATGCAGAGGTCAGATATCTT...TTCTATGATACAGGATACACGGAACGTTATATGGGTCACCCTGACCAGAATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR GCA 90 bp AACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCAAGATATCTGACCTCTaGATTAATGCCATCAGGGAG +
Preference number: 4 (lower is better)
Translates to: NLLIWLNSQCIPESSTQVKISDL*INAIRE
Trigger: CTCCCTGATGGCATTAATGCAGAGGTCAGATATCTT...GACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000341861.9
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR GCA 90 bp CTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTATCAAACAAACCGTAGACCCCTaGATGGCACCACATTTATTT +
Preference number: 4 (lower is better)
Translates to: LHGTTFIFRSRCYMAGIKQTVDP*MAPHLF
Trigger: AAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTG...TTTGATACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR GCA 90 bp CTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCAAAGTAAACAACATCTCCTaGTGCTTTCAGAGTGAGACG +
Preference number: 4 (lower is better)
Translates to: LLIWLNSQCIPESSTQVKVNNIS*CFQSET
Trigger: CGTCTCACTCTGAAAGCAGCAGGAGATGTTGTTTAC...TTTGACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR GCA 90 bp TGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTATCAAAAAGCATAGAATCCCTCTaGTCATCCTGCTCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: CMAPHLFSGVDVTWQVSKSIESL*SSCSSH
Trigger: GTGAGAAGAGCAGGATGAGCAGAGGGATTCTATGCT...TTTTGATACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321147.10
ENST00000341861.9
CDS-3UTR CCA 90 bp ATTACTACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGCCATGATATTTTCTaGTATCGGCAAGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: ITTTNRRPLHGTTFIFRSSHDIF*YRQAAF
Trigger: AAAAGCTGCTTGCCGATACCAGAAAATATCATGGCT...ACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGTAGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CCA 90 bp AATAGCTATAAAGATGGGCTCCCAGGCTTAAGCAAGCACTCTACTCTATATTCCCATCTTCTTCCATGTTaGCTAGCTCATTGTGCACAT +
Preference number: 4 (lower is better)
Translates to: NSYKDGLPGLSKHSTLYSHLLPC*LAHCAH
Trigger: ATGTGCACAATGAGCTAGCCAACATGGAAGAAGATG...GGAATATAGAGTAGAGTGCTTGCTTAAGCCTGGGAGCCCATCTTTATAGCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR CCA 90 bp AACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCGAGTCCATCCAGCTCTaGCAATATATTCAACTCCTT +
Preference number: 4 (lower is better)
Translates to: NLLIWLNSQCIPESSTQVESIQL*QYIQLL
Trigger: AAGGAGTTGAATATATTGCCAGAGCTGGATGGACTC...GACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CCA 90 bp AACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCAGCGATCTAGTAGGATaGACCAAGCATATTTTCCCT +
Preference number: 4 (lower is better)
Translates to: NLLIWLNSQCIPESSTQVSDLVG*TKHIFP
Trigger: AGGGAAAATATGCTTGGTCCATCCTACTAGATCGCT...GACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CCA 90 bp CTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCAAACAGGCAGCCCACCACTaGATCGTTTATATTTGCTTT +
Preference number: 4 (lower is better)
Translates to: LLIWLNSQCIPESSTQVKQAAHH*IVYICF
Trigger: AAAGCAAATATAAACGATCCAGTGGTGGGCTGCCTG...TTTGACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CCA 90 bp CAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACACTAAAGGGGAGTCTTTaGTGCCTTCAAAATATACCA +
Preference number: 4 (lower is better)
Translates to: QTVDPCMAPHLFSGVDVTLKGSL*CLQNIP
Trigger: TGGTATATTTTGAAGGCACCAAAGACTCCCCTTTAG...TGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CCA 90 bp ACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACCTAAAGGGGAGTCTTTaGTGCCTTCAAAATATACCA +
Preference number: 4 (lower is better)
Translates to: TNRRPLHGTTFIFRSRCYLKGSL*CLQNIP
Trigger: TGGTATATTTTGAAGGCACCAAAGACTCCCCTTTAG...GTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CCA 90 bp TCTCATCCAGGAAACCATGTAAGAGCAGTAAACGATTTGGTTCAGAGGGGAACTAAGGGACACACAGTGTaGATTCTTCTGGTTACTATA +
Preference number: 4 (lower is better)
Translates to: SHPGNHVRAVNDLVQRGTKGHTV*ILLVTI
Trigger: TATAGTAACCAGAAGAATCCACACTGTGTGTCCCTT...AGTTCCCCTCTGAACCAAATCGTTTACTGCTCTTACATGGTTTCCTGGATGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR CCA 90 bp ATTACTACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAAGGGACACACAGTGTaGATTCTTCTGGTTACTATA +
Preference number: 4 (lower is better)
Translates to: ITTTNRRPLHGTTFIFRSKGHTV*ILLVTI
Trigger: TATAGTAACCAGAAGAATCCACACTGTGTGTCCCTT...ACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGTAGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR CCA 90 bp ACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCTGAATCCAAAATGGTaGCCCAAAATTCCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: TVDPCMAPHLFSGVDVTWLNPKW*PKIPLF
Trigger: AAACAAAGGAATTTTGGGCCACCATTTTGGATTCAG...CCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR CCA 90 bp AACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCCTGCTGAATCCAAAATaGTGGCCCAAAATTCCTTTG +
Preference number: 4 (lower is better)
Translates to: NLLIWLNSQCIPESSTQVLLNPK*WPKIPL
Trigger: CAAAGGAATTTTGGGCCACCATTTTGGATTCAGCAG...GACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR CCA 90 bp ATTACTACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTACTTTTCTGCTTGCATaGCCACAGATCCTAAGTAAT +
Preference number: 4 (lower is better)
Translates to: ITTTNRRPLHGTTFIFRSTFLLA*PQILSN
Trigger: ATTACTTAGGATCTGTGGCCATGCAAGCAGAAAAGT...ACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGTAGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR CCA 90 bp ACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACACTTTTCTGCTTGCATaGCCACAGATCCTAAGTAAT +
Preference number: 4 (lower is better)
Translates to: TNRRPLHGTTFIFRSRCYTFLLA*PQILSN
Trigger: ATTACTTAGGATCTGTGGCCATGCAAGCAGAAAAGT...GTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR CCA 90 bp GTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGGAGTAGATGTTACATaGCAGGTATCAAAATGTGAT +
Preference number: 4 (lower is better)
Translates to: VDPCMAPHLFSGVDVTWQGVDVT*QVSKCD
Trigger: ATCACATTTTGATACCTGCCATGTAACATCTACTCC...CTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR CCA 90 bp ACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGTTCTTATGGTATTGCTaGGTCTCTCAGGAATATGTA +
Preference number: 4 (lower is better)
Translates to: TVDPCMAPHLFSGVDVTWFLWYC*VSQEYV
Trigger: TACATATTCCTGAGAGACCCAGCAATACCATAAGAA...CCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR CCA 90 bp ACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGGGGAAAATACTTTCTTaGGGAAGAAAGTTACCCAAA +
Preference number: 4 (lower is better)
Translates to: TVDPCMAPHLFSGVDVTWGKILS*GRKLPK
Trigger: TTTGGGTAACTTTCTTCCCCAAGAAAGTATTTTCCC...CCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR CCA 90 bp AACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCGGTGAGAGGTTTCAATaGAGTAGCTGCTTAAAAGCT +
Preference number: 4 (lower is better)
Translates to: NLLIWLNSQCIPESSTQVGERFQ*SSCLKA
Trigger: AGCTTTTAAGCAGCTACTCCATTGAAACCTCTCACC...GACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR CCA 90 bp TATAAAGATGGGCTCCCAGGCTTAAGCAAGCACTCTACTCTATATTCCAATCCTTCTTGTATGAGGCTTTaGAAAAGAACCAGGAATGGC +
Preference number: 4 (lower is better)
Translates to: YKDGLPGLSKHSTLYSNPSCMRL*KRTRNG
Trigger: GCCATTCCTGGTTCTTTTCCAAAGCCTCATACAAGA...AGGATTGGAATATAGAGTAGAGTGCTTGCTTAAGCCTGGGAGCCCATCTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR CCA 90 bp GTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTCTGTATCCCTTCGCCTCTGTaGGCTTCCGTTTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: VDVTWQVSKCDDQFCVFCIPSPL*ASVSSS
Trigger: AGATGAGGAAACGGAAGCCCACAGAGGCGAAGGGAT...ACAGAAAACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341861.9
3UTR CAA 72 bp TGCATGCATTGTGACCTAATCCTCTTGTATGAGGCTTaGGAAAAGAACCAGGAATGGCATAGAGAGAAAAAC +
Preference number: 4 (lower is better)
Translates to: CMHCDLILLYEA*EKNQEWHREKN
Trigger: GTTTTTCTCTCTATGCCATTCCTGGTTCTTTTCCAAAGCCTCATACAAGAGGATTAGGTCACAATGCATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR TCA 90 bp CTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCAAAGTAATAGATTCTGTCTaGATGAGGTCCATCTGGATC +
Preference number: 4 (lower is better)
Translates to: LLIWLNSQCIPESSTQVKVIDSV*MRSIWI
Trigger: GATCCAGATGGACCTCATTCAGACAGAATCTATTAC...TTTGACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR TCA 90 bp TTAAACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGCAGGATTTACGTAACTaGCTACGTACAGGTGATGCT +
Preference number: 4 (lower is better)
Translates to: LNLLIWLNSQCIPESSTQQDLRN*LRTGDA
Trigger: AGCATCACCTGTACGTAGTCAGTTACGTAAATCCTG...CTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR TCA 90 bp CAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACACACGATCTAAGTCAATaGAATCATATCGAGAAGCTA +
Preference number: 4 (lower is better)
Translates to: QTVDPCMAPHLFSGVDVTHDLSQ*NHIEKL
Trigger: TAGCTTCTCGATATGATTTCATTGACTTAGATCGTG...TGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300141.11
ENST00000341861.9
ENST00000558786.5
CDS-3UTR TCA 90 bp ACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACTTCTGTGTTTTCTGTTaGTTAAACCTCCTCATTTGG +
Preference number: 4 (lower is better)
Translates to: TNRRPLHGTTFIFRSRCYFCVFC*LNLLIW
Trigger: CCAAATGAGGAGGTTTAATCAACAGAAAACACAGAA...GTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR TCA 90 bp ACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACGAAAATAGGGTAGTATaGATACATGGTGCTAATGTC +
Preference number: 4 (lower is better)
Translates to: TNRRPLHGTTFIFRSRCYENRVV*IHGANV
Trigger: GACATTAGCACCATGTATTCATACTACCCTATTTTC...GTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR TCA 90 bp ACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACGATATGCCCAAGCAATaGAGCATAAGCTATTCAATT +
Preference number: 4 (lower is better)
Translates to: TNRRPLHGTTFIFRSRCYDMPKQ*SISYSI
Trigger: AATTGAATAGCTTATGCTTCATTGCTTGGGCATATC...GTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR TCA 90 bp TCAGGAGTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTCCCACTTGGTGTCAATaGAGTCCACCTCTTACCAAT +
Preference number: 4 (lower is better)
Translates to: SGVDVTWQVSKCDDQFCVPTWCQ*SPPLTN
Trigger: ATTGGTAAGAGGTGGACTTCATTGACACCAAGTGGG...AACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTACTCCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR TCA 90 bp CTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCAAAAAAGGAAAACACCTGTaGACTCCAGAGTACATGAAG +
Preference number: 4 (lower is better)
Translates to: LLIWLNSQCIPESSTQVKKGKHL*TPEYMK
Trigger: CTTCATGTACTCTGGAGTTCACAGGTGTTTTCCTTT...TTTGACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR TCA 90 bp GTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTCTGTCTGGTCTTGATCTCCTaGCTTCAAGTGATTCACCCG +
Preference number: 4 (lower is better)
Translates to: VDVTWQVSKCDDQFCVFCLVLIS*LQVIHP
Trigger: CGGGTGAATCACTTGAAGTCAGGAGATCAAGACCAG...ACAGAAAACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR TCA 90 bp CTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTATCAAACCTAATCCTCTTGTATaGGGCTTTGGAAAAGAACCA +
Preference number: 4 (lower is better)
Translates to: LHGTTFIFRSRCYMAGIKPNPLV*GFGKEP
Trigger: TGGTTCTTTTCCAAAGCCTCATACAAGAGGATTAGG...TTTGATACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR GCA 90 bp CTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCAAATGTTTCCATTGCTGCTaGCATGTTGCATTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: LLIWLNSQCIPESSTQVKCFHCC*HVAFSF
Trigger: GAAGGAAAATGCAACATGGCAGCAGCAATGGAAACA...TTTGACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000358939.8
CDS-3UTR GCA 90 bp CTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCAAACTGTTCTGTTTCCATTaGTGCTGCCATGTTGCATTT +
Preference number: 4 (lower is better)
Translates to: LLIWLNSQCIPESSTQVKLFCFH*CCHVAF
Trigger: AAATGCAACATGGCAGCAGCAATGGAAACAGAACAG...TTTGACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR GCA 90 bp AGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTTTCCGACTGTTCCAATaGGTTTTCTTTCTCTTAATA +
Preference number: 4 (lower is better)
Translates to: RPLHGTTFIFRSRCYMAGFRLFQ*VFFLLI
Trigger: TATTAAGAGAAAGAAAACGCATTGGAACAGTCGGAA...ACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR GCA 90 bp AACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCGACTCAATGAGTCTCTaGCTTTCCATAACATCATCT +
Preference number: 4 (lower is better)
Translates to: NLLIWLNSQCIPESSTQVDSMSL*LSITSS
Trigger: AGATGATGTTATGGAAAGGCAGAGACTCATTGAGTC...GACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR GCA 90 bp AGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTAAAATTCCTTTGTTTTaGAAGTTGGGTCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: RPLHGTTFIFRSRCYMAGKIPLF*KLGHLQ
Trigger: CTGAAGATGACCCAACTTGCAAAACAAAGGAATTTT...ACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR GCA 90 bp AGCAGTAAACGATTTGGTTCAGAGGGGAACTTTTCTGCTTGCATGGCCACAGATAAAATTCCTTTGTTTTaGAAGTTGGGTCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: SSKRFGSEGNFSACMATDKIPLF*KLGHLQ
Trigger: CTGAAGATGACCCAACTTGCAAAACAAAGGAATTTT...ATCTGTGGCCATGCAAGCAGAAAAGTTCCCCTCTGAACCAAATCGTTTACTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR GCA 90 bp CTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTATCAAAAAGATATCTGACCTCTaGATTAATGCCATCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LHGTTFIFRSRCYMAGIKKISDL*INAIRE
Trigger: CTCCCTGATGGCATTAATGCAGAGGTCAGATATCTT...TTTGATACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300141.11
ENST00000341861.9
ENST00000558786.5
CDS-3UTR GCA 90 bp GTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTCTGTAGAGGGGAACTTTTCTaGTTGCATGGCCACAGATCC +
Preference number: 4 (lower is better)
Translates to: VDVTWQVSKCDDQFCVFCRGELF*LHGHRS
Trigger: GGATCTGTGGCCATGCAAGCAGAAAAGTTCCCCTCT...ACAGAAAACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR GCA 90 bp TGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTATCAAAACAAACCGTAGACCCCTaGATGGCACCACATTTATTT +
Preference number: 4 (lower is better)
Translates to: CMAPHLFSGVDVTWQVSKQTVDP*MAPHLF
Trigger: AAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTG...TTTTGATACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR GCA 90 bp GACACACTCACCTTATATAGTTTAGAAATGGCCATGTCTCTTTTCTTACATCAACATAGATGCCTTCCCTaGCACTGGTGTCAATGTGAC +
Preference number: 4 (lower is better)
Translates to: DTLTLYSLEMAMSLFLHQHRCLP*HWCQCD
Trigger: GTCACATTGACACCAGTGGCAGGGAAGGCATCTATG...TTGATGTAAGAAAAGAGACATGGCCATTTCTAAACTATATAAGGTGAGTGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR GCA 90 bp ACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTCAGCAGCATCTTTATTaGAACAAAGAACCTGTAATA +
Preference number: 4 (lower is better)
Translates to: TTNRRPLHGTTFIFRSRCQQHLY*NKEPVI
Trigger: TATTACAGGTTCTTTGTTGCAATAAAGATGCTGCTG...ACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR GCA 90 bp TACGTGATCCAAGGTTTTCTTGAAGGTAGTGCAAAAGATGCAGTTCATAATGTTAGCATAGAATCCCTCTaGTCATCCTGCTCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: YVIQGFLEGSAKDAVHNVSIESL*SSCSSH
Trigger: GTGAGAAGAGCAGGATGAGCAGAGGGATTCTATGCT...AACATTATGAACTGCATCTTTTGCACTACCTTCAAGAAAACCTTGGATCACGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR GCA 90 bp TCAGGAGTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTAGCATAGAATCCCTCTaGTCATCCTGCTCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: SGVDVTWQVSKCDDQFCVSIESL*SSCSSH
Trigger: GTGAGAAGAGCAGGATGAGCAGAGGGATTCTATGCT...AACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTACTCCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321147.10
ENST00000341861.9
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CCA 90 bp TATAAAGATGGGCTCCCAGGCTTAAGCAAGCACTCTACTCTATATTCCAATCCTAGCCATGATATTTTCTaGTATCGGCAAGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: YKDGLPGLSKHSTLYSNPSHDIF*YRQAAF
Trigger: AAAAGCTGCTTGCCGATACCAGAAAATATCATGGCT...AGGATTGGAATATAGAGTAGAGTGCTTGCTTAAGCCTGGGAGCCCATCTTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR CCA 90 bp TTAAACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGTTGCGTAAATCCTTGTaGCCCTCCATCTTTTACGTG +
Preference number: 4 (lower is better)
Translates to: LNLLIWLNSQCIPESSTQLRKSL*PSIFYV
Trigger: CACGTAAAAGATGGAGGGCCACAAGGATTTACGCAA...CTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CCA 90 bp CTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCAAACATCTTCTTCCATGTTaGCTAGCTCATTGTGCACAT +
Preference number: 4 (lower is better)
Translates to: LLIWLNSQCIPESSTQVKHLLPC*LAHCAH
Trigger: ATGTGCACAATGAGCTAGCCAACATGGAAGAAGATG...TTTGACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CCA 90 bp AACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCGAATTTTACCACCACTaGGAGTTGTTTCAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: NLLIWLNSQCIPESSTQVEFYHH*ELFQLL
Trigger: CAAAAGCTGAAACAACTCCCAGTGGTGGTAAAATTC...GACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CCA 90 bp ATTAGATTACTACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAAGCGATCTAGTAGGATaGACCAAGCATATTTTCCCT +
Preference number: 4 (lower is better)
Translates to: IRLLPQTVDPCMAPHLFSSDLVG*TKHIFP
Trigger: AGGGAAAATATGCTTGGTCCATCCTACTAGATCGCT...TGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGTAGTAATCTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CCA 90 bp CAGCAATACGTGATCCAAGGTTTTCTTGAAGGTAGTGCAAAAGATGCAGTTCATAGCGATCTAGTAGGATaGACCAAGCATATTTTCCCT +
Preference number: 4 (lower is better)
Translates to: QQYVIQGFLEGSAKDAVHSDLVG*TKHIFP
Trigger: AGGGAAAATATGCTTGGTCCATCCTACTAGATCGCT...ATGAACTGCATCTTTTGCACTACCTTCAAGAAAACCTTGGATCACGTATTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR CCA 90 bp TTACTGTGCAAAAGGAACATCGGATTCTCATCATTTCCCAAAGCAGCAGAAAGGCTAAAGGGGAGTCTTTaGTGCCTTCAAAATATACCA +
Preference number: 4 (lower is better)
Translates to: LLCKRNIGFSSFPKAAERLKGSL*CLQNIP
Trigger: TGGTATATTTTGAAGGCACCAAAGACTCCCCTTTAG...CCTTTCTGCTGCTTTGGGAAATGATGAGAATCCGATGTTCCTTTTGCACAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR CCA 90 bp ATTACTACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTCTGAATCCAAAATGGTaGCCCAAAATTCCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: ITTTNRRPLHGTTFIFRSLNPKW*PKIPLF
Trigger: AAACAAAGGAATTTTGGGCCACCATTTTGGATTCAG...ACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGTAGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR CCA 90 bp CTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCAAACTGCTGAATCCAAAATaGTGGCCCAAAATTCCTTTG +
Preference number: 4 (lower is better)
Translates to: LLIWLNSQCIPESSTQVKLLNPK*WPKIPL
Trigger: CAAAGGAATTTTGGGCCACCATTTTGGATTCAGCAG...TTTGACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR CCA 90 bp ATTAGATTACTACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCACTGCTGAATCCAAAATaGTGGCCCAAAATTCCTTTG +
Preference number: 4 (lower is better)
Translates to: IRLLPQTVDPCMAPHLFSLLNPK*WPKIPL
Trigger: CAAAGGAATTTTGGGCCACCATTTTGGATTCAGCAG...TGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGTAGTAATCTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR CCA 90 bp ACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTAAAAGAGAAAATTTCTaGAGGAGTATAGTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: TTNRRPLHGTTFIFRSRCKRENF*RSIVRK
Trigger: CTTCCTGACTATACTCCTCCAGAAATTTTCTCTTTT...ACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR CCA 90 bp ACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGAAAAGAGAAAATTTCTaGAGGAGTATAGTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: TVDPCMAPHLFSGVDVTWKRENF*RSIVRK
Trigger: CTTCCTGACTATACTCCTCCAGAAATTTTCTCTTTT...CCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR CCA 90 bp AGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTAAAAGAGAAAATTTCTaGAGGAGTATAGTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: RPLHGTTFIFRSRCYMAGKRENF*RSIVRK
Trigger: CTTCCTGACTATACTCCTCCAGAAATTTTCTCTTTT...ACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR CCA 90 bp GTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGAAAAGAGAAAATTTCTaGAGGAGTATAGTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: VDPCMAPHLFSGVDVTWQKRENF*RSIVRK
Trigger: CTTCCTGACTATACTCCTCCAGAAATTTTCTCTTTT...CTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR CCA 90 bp ATTACTACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTTTCTTATGGTATTGCTaGGTCTCTCAGGAATATGTA +
Preference number: 4 (lower is better)
Translates to: ITTTNRRPLHGTTFIFRSFLWYC*VSQEYV
Trigger: TACATATTCCTGAGAGACCCAGCAATACCATAAGAA...ACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGTAGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR CCA 90 bp CTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTATCAAATCTTGTATGAGGCTTTaGAAAAGAACCAGGAATGGC +
Preference number: 4 (lower is better)
Translates to: LHGTTFIFRSRCYMAGIKSCMRL*KRTRNG
Trigger: GCCATTCCTGGTTCTTTTCCAAAGCCTCATACAAGA...TTTGATACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR TCA 90 bp TTAAACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGTTTAGGCCGATCCTGTaGTTCAATATTCTCCTCACA +
Preference number: 4 (lower is better)
Translates to: LNLLIWLNSQCIPESSTQFRPIL*FNILLT
Trigger: TGTGAGGAGAATATTGAATCACAGGATCGGCCTAAA...CTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR TCA 90 bp GACACACTCACCTTATATAGTTTAGAAATGGCCATGTCTCTTTTCTTACATCAAAGCAGCTTTTTAAGCTaGCTCCAGGAATACCGCTCA +
Preference number: 4 (lower is better)
Translates to: DTLTLYSLEMAMSLFLHQSSFLS*LQEYRS
Trigger: TGAGCGGTATTCCTGGAGTCAGCTTAAAAAGCTGCT...TTGATGTAAGAAAAGAGACATGGCCATTTCTAAACTATATAAGGTGAGTGTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR TCA 90 bp CAAAATGGACATTCTCATCCAGGAAACCATGTAAGAGCAGTAAACGATTTGGTTATTCCACTACCGGCTTaGAACAGAAATGTTCCACTT +
Preference number: 4 (lower is better)
Translates to: QNGHSHPGNHVRAVNDLVIPLPA*NRNVPL
Trigger: AAGTGGAACATTTCTGTTTCAAGCCGGTAGTGGAAT...AACCAAATCGTTTACTGCTCTTACATGGTTTCCTGGATGAGAATGTCCATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR TCA 90 bp AACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCAATATACCAGCCTTCTaGCTTCATCAACTTGGATAT +
Preference number: 4 (lower is better)
Translates to: NLLIWLNSQCIPESSTQVNIPAF*LHQLGY
Trigger: ATATCCAAGTTGATGAAGTCAGAAGGCTGGTATATT...GACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR TCA 90 bp TATAAAGATGGGCTCCCAGGCTTAAGCAAGCACTCTACTCTATATTCCAATCCTAATATACCAGCCTTCTaGCTTCATCAACTTGGATAT +
Preference number: 4 (lower is better)
Translates to: YKDGLPGLSKHSTLYSNPNIPAF*LHQLGY
Trigger: ATATCCAAGTTGATGAAGTCAGAAGGCTGGTATATT...AGGATTGGAATATAGAGTAGAGTGCTTGCTTAAGCCTGGGAGCCCATCTTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR TCA 90 bp AATAGCTATAAAGATGGGCTCCCAGGCTTAAGCAAGCACTCTACTCTATATTCCTTCTGTGTTTTCTGTTaGTTAAACCTCCTCATTTGG +
Preference number: 4 (lower is better)
Translates to: NSYKDGLPGLSKHSTLYSFCVFC*LNLLIW
Trigger: CCAAATGAGGAGGTTTAATCAACAGAAAACACAGAA...GGAATATAGAGTAGAGTGCTTGCTTAAGCCTGGGAGCCCATCTTTATAGCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR TCA 90 bp AACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCTTCTGTGTTTTCTGTTaGTTAAACCTCCTCATTTGG +
Preference number: 4 (lower is better)
Translates to: NLLIWLNSQCIPESSTQVFCVFC*LNLLIW
Trigger: CCAAATGAGGAGGTTTAATCAACAGAAAACACAGAA...GACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR TCA 90 bp AACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCGAAAATAGGGTAGTATaGATACATGGTGCTAATGTC +
Preference number: 4 (lower is better)
Translates to: NLLIWLNSQCIPESSTQVENRVV*IHGANV
Trigger: GACATTAGCACCATGTATTCATACTACCCTATTTTC...GACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR TCA 90 bp AATAGCTATAAAGATGGGCTCCCAGGCTTAAGCAAGCACTCTACTCTATATTCCCAAAGATTCTGGAACTaGACCAAACCAATCACTAAT +
Preference number: 4 (lower is better)
Translates to: NSYKDGLPGLSKHSTLYSQRFWN*TKPITN
Trigger: ATTAGTGATTGGTTTGGTTCAGTTCCAGAATCTTTG...GGAATATAGAGTAGAGTGCTTGCTTAAGCCTGGGAGCCCATCTTTATAGCTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR TCA 90 bp AATAGCTATAAAGATGGGCTCCCAGGCTTAAGCAAGCACTCTACTCTATATTCCGATATGCCCAAGCAATaGAGCATAAGCTATTCAATT +
Preference number: 4 (lower is better)
Translates to: NSYKDGLPGLSKHSTLYSDMPKQ*SISYSI
Trigger: AATTGAATAGCTTATGCTTCATTGCTTGGGCATATC...GGAATATAGAGTAGAGTGCTTGCTTAAGCCTGGGAGCCCATCTTTATAGCTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR TCA 90 bp TTAAACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTGCTGGCAAGACAGTaGTTTATTGATTCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: LNLLIWLNSQCIPESSTQVLARQ*FIDSGF
Trigger: GAAACCAGAATCAATAAATCACTGTCTTGCCAGCAC...CTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR TCA 90 bp TCAGGAGTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTAAAGGACTTATGAAATaGTCACCTAGAGCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: SGVDVTWQVSKCDDQFCVKGLMK*SPRAQD
Trigger: GTCCTGGGCTCTAGGTGATCATTTCATAAGTCCTTT...AACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTACTCCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR TCA 90 bp CTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTATCAAAGACCTTGAAAAACTATaGATGAGGAACAAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: LHGTTFIFRSRCYMAGIKDLEKL*MRNKRR
Trigger: TCTCCTCTTGTTCCTCATTCATAGTTTTTCAAGGTC...TTTGATACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341861.9
CDS-3UTR GCA 90 bp TGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTATCAAAATGTTTCCATTGCTGCTaGCATGTTGCATTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: CMAPHLFSGVDVTWQVSKCFHCC*HVAFSF
Trigger: GAAGGAAAATGCAACATGGCAGCAGCAATGGAAACA...TTTTGATACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000358939.8
CDS-3UTR GCA 90 bp TGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTATCAAAACTGTTCTGTTTCCATTaGTGCTGCCATGTTGCATTT +
Preference number: 4 (lower is better)
Translates to: CMAPHLFSGVDVTWQVSKLFCFH*CCHVAF
Trigger: AAATGCAACATGGCAGCAGCAATGGAAACAGAACAG...TTTTGATACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR GCA 90 bp CAAAATGGACATTCTCATCCAGGAAACCATGTAAGAGCAGTAAACGATTTGGTTCTGTTCTGTTTCCATTaGTGCTGCCATGTTGCATTT +
Preference number: 4 (lower is better)
Translates to: QNGHSHPGNHVRAVNDLVLFCFH*CCHVAF
Trigger: AAATGCAACATGGCAGCAGCAATGGAAACAGAACAG...AACCAAATCGTTTACTGCTCTTACATGGTTTCCTGGATGAGAATGTCCATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR GCA 90 bp ATTAGATTACTACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCATCCATAGTCCAGTGTTaGCTGAAAAAGATCCAAAAG +
Preference number: 4 (lower is better)
Translates to: IRLLPQTVDPCMAPHLFSSIVQC*LKKIQK
Trigger: CTTTTGGATCTTTTTCAGGCAACACTGGACTATGGA...TGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGTAGTAATCTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR GCA 90 bp CTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCAAATCCATAGTCCAGTGTTaGCTGAAAAAGATCCAAAAG +
Preference number: 4 (lower is better)
Translates to: LLIWLNSQCIPESSTQVKSIVQC*LKKIQK
Trigger: CTTTTGGATCTTTTTCAGGCAACACTGGACTATGGA...TTTGACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR GCA 90 bp ACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACTTCCGACTGTTCCAATaGGTTTTCTTTCTCTTAATA +
Preference number: 4 (lower is better)
Translates to: TNRRPLHGTTFIFRSRCYFRLFQ*VFFLLI
Trigger: TATTAAGAGAAAGAAAACGCATTGGAACAGTCGGAA...GTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR GCA 90 bp ATTACTACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTTTCCGACTGTTCCAATaGGTTTTCTTTCTCTTAATA +
Preference number: 4 (lower is better)
Translates to: ITTTNRRPLHGTTFIFRSFRLFQ*VFFLLI
Trigger: TATTAAGAGAAAGAAAACGCATTGGAACAGTCGGAA...ACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGTAGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR GCA 90 bp GTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTCTGTGGCCTTAAAGGTTGTTaGGTAAATCCTTGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: VDVTWQVSKCDDQFCVFCGLKGC*VNPCGP
Trigger: AGGGCCACAAGGATTTACGCAACAACCTTTAAGGCC...ACAGAAAACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR GCA 90 bp ATTAGATTACTACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGACTCAATGAGTCTCTaGCTTTCCATAACATCATCT +
Preference number: 4 (lower is better)
Translates to: IRLLPQTVDPCMAPHLFSDSMSL*LSITSS
Trigger: AGATGATGTTATGGAAAGGCAGAGACTCATTGAGTC...TGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGTAGTAATCTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR GCA 90 bp TCAGGAGTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTGGATATTAGATCCATaGCGGCCAAGAACTTCCCAT +
Preference number: 4 (lower is better)
Translates to: SGVDVTWQVSKCDDQFCVWILDP*RPRTSH
Trigger: ATGGGAAGTTCTTGGCCGGCATGGATCTAATATCCA...AACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTACTCCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR GCA 90 bp TACGTGATCCAAGGTTTTCTTGAAGGTAGTGCAAAAGATGCAGTTCATAATGTTAAGGGGAGTCTTTGGTaGCTTCAAAATATACCAGCC +
Preference number: 4 (lower is better)
Translates to: YVIQGFLEGSAKDAVHNVKGSLW*LQNIPA
Trigger: GGCTGGTATATTTTGAAGGCACCAAAGACTCCCCTT...AACATTATGAACTGCATCTTTTGCACTACCTTCAAGAAAACCTTGGATCACGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR GCA 90 bp TCAGGAGTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTAAGGGGAGTCTTTGGTaGCTTCAAAATATACCAGCC +
Preference number: 4 (lower is better)
Translates to: SGVDVTWQVSKCDDQFCVKGSLW*LQNIPA
Trigger: GGCTGGTATATTTTGAAGGCACCAAAGACTCCCCTT...AACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTACTCCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR GCA 90 bp ATTACTACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAAAATTCCTTTGTTTTaGAAGTTGGGTCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: ITTTNRRPLHGTTFIFRSKIPLF*KLGHLQ
Trigger: CTGAAGATGACCCAACTTGCAAAACAAAGGAATTTT...ACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGTAGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR GCA 90 bp CAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACAAAAATTCCTTTGTTTTaGAAGTTGGGTCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: QTVDPCMAPHLFSGVDVTKIPLF*KLGHLQ
Trigger: CTGAAGATGACCCAACTTGCAAAACAAAGGAATTTT...TGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR GCA 90 bp GTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTCTGTGGGAACTTTTCTGCTTaGATGGCCACAGATCCTAAG +
Preference number: 4 (lower is better)
Translates to: VDVTWQVSKCDDQFCVFCGNFSA*MATDPK
Trigger: CTTAGGATCTGTGGCCATGCAAGCAGAAAAGTTCCC...ACAGAAAACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR GCA 90 bp TCAGGAGTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTCAAACCGTAGACCCCTaGATGGCACCACATTTATTT +
Preference number: 4 (lower is better)
Translates to: SGVDVTWQVSKCDDQFCVQTVDP*MAPHLF
Trigger: AAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTG...AACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTACTCCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR GCA 90 bp GTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTCTGTTCCCTCTGCTCATCCTaGTCTTCTCACAGGAATCTT +
Preference number: 4 (lower is better)
Translates to: VDVTWQVSKCDDQFCVFCSLCSS*SSHRNL
Trigger: AAGATTCCTGTGAGAAGAGCAGGATGAGCAGAGGGA...ACAGAAAACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321147.10
ENST00000341861.9
ENST00000395652.7
ENST00000559233.5
CDS-3UTR GCA 90 bp ATTACTACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTTTGCTGCTGCCATGTTaGATTTTCCTGATTTTATTT +
Preference number: 4 (lower is better)
Translates to: ITTTNRRPLHGTTFIFRSLLLPC*IFLILF
Trigger: AAATAAAATCAGGAAAATGCAACATGGCAGCAGCAA...ACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGTAGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000321147.10
ENST00000341861.9
CDS-3UTR CCA 90 bp CTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCAAAAGCCATGATATTTTCTaGTATCGGCAAGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: LLIWLNSQCIPESSTQVKSHDIF*YRQAAF
Trigger: AAAAGCTGCTTGCCGATACCAGAAAATATCATGGCT...TTTGACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CCA 90 bp TGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTATCAAAACATCTTCTTCCATGTTaGCTAGCTCATTGTGCACAT +
Preference number: 4 (lower is better)
Translates to: CMAPHLFSGVDVTWQVSKHLLPC*LAHCAH
Trigger: ATGTGCACAATGAGCTAGCCAACATGGAAGAAGATG...TTTTGATACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CCA 90 bp TTAAACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGCATCTTCTTCCATGTTaGCTAGCTCATTGTGCACAT +
Preference number: 4 (lower is better)
Translates to: LNLLIWLNSQCIPESSTQHLLPC*LAHCAH
Trigger: ATGTGCACAATGAGCTAGCCAACATGGAAGAAGATG...CTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CCA 90 bp TATAAAGATGGGCTCCCAGGCTTAAGCAAGCACTCTACTCTATATTCCAATCCTCTATCAAATTCTTCTTaGAGAACAAAGGTAGCGACT +
Preference number: 4 (lower is better)
Translates to: YKDGLPGLSKHSTLYSNPLSNSS*RTKVAT
Trigger: AGTCGCTACCTTTGTTCTCCAAGAAGAATTTGATAG...AGGATTGGAATATAGAGTAGAGTGCTTGCTTAAGCCTGGGAGCCCATCTTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR CCA 90 bp ATTAGATTACTACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGAATTTTACCACCACTaGGAGTTGTTTCAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: IRLLPQTVDPCMAPHLFSEFYHH*ELFQLL
Trigger: CAAAAGCTGAAACAACTCCCAGTGGTGGTAAAATTC...TGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGTAGTAATCTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CCA 90 bp CTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCAAAGAATTTTACCACCACTaGGAGTTGTTTCAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: LLIWLNSQCIPESSTQVKEFYHH*ELFQLL
Trigger: CAAAAGCTGAAACAACTCCCAGTGGTGGTAAAATTC...TTTGACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CCA 90 bp CTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTATCAAAAAGGGACACACAGTGTaGATTCTTCTGGTTACTATA +
Preference number: 4 (lower is better)
Translates to: LHGTTFIFRSRCYMAGIKKGHTV*ILLVTI
Trigger: TATAGTAACCAGAAGAATCCACACTGTGTGTCCCTT...TTTGATACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR CCA 90 bp AATAGCTATAAAGATGGGCTCCCAGGCTTAAGCAAGCACTCTACTCTATATTCCCTGAATCCAAAATGGTaGCCCAAAATTCCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: NSYKDGLPGLSKHSTLYSLNPKW*PKIPLF
Trigger: AAACAAAGGAATTTTGGGCCACCATTTTGGATTCAG...GGAATATAGAGTAGAGTGCTTGCTTAAGCCTGGGAGCCCATCTTTATAGCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR CCA 90 bp AACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCCTGAATCCAAAATGGTaGCCCAAAATTCCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: NLLIWLNSQCIPESSTQVLNPKW*PKIPLF
Trigger: AAACAAAGGAATTTTGGGCCACCATTTTGGATTCAG...GACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR CCA 90 bp AACTGCCTTACTGTGCAAAAGGAACATCGGATTCTCATCATTTCCCAAAGCAGCAAAAGAGAAAATTTCTaGAGGAGTATAGTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: NCLTVQKEHRILIISQSSKRENF*RSIVRK
Trigger: CTTCCTGACTATACTCCTCCAGAAATTTTCTCTTTT...GCTGCTTTGGGAAATGATGAGAATCCGATGTTCCTTTTGCACAGTAAGGCAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR CCA 90 bp CAGCAATACGTGATCCAAGGTTTTCTTGAAGGTAGTGCAAAAGATGCAGTTCATACTTTTCTGCTTGCATaGCCACAGATCCTAAGTAAT +
Preference number: 4 (lower is better)
Translates to: QQYVIQGFLEGSAKDAVHTFLLA*PQILSN
Trigger: ATTACTTAGGATCTGTGGCCATGCAAGCAGAAAAGT...ATGAACTGCATCTTTTGCACTACCTTCAAGAAAACCTTGGATCACGTATTGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR CCA 90 bp GAAACAGCCTTAATGGGTGAGAGGTTTCAATGGAGTAGCTGCTTAAAAGCTACTGGAGTAGATGTTACATaGCAGGTATCAAAATGTGAT +
Preference number: 4 (lower is better)
Translates to: ETALMGERFQWSSCLKATGVDVT*QVSKCD
Trigger: ATCACATTTTGATACCTGCCATGTAACATCTACTCC...AGTAGCTTTTAAGCAGCTACTCCATTGAAACCTCTCACCCATTAAGGCTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR CCA 90 bp AACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCGGAGTAGATGTTACATaGCAGGTATCAAAATGTGAT +
Preference number: 4 (lower is better)
Translates to: NLLIWLNSQCIPESSTQVGVDVT*QVSKCD
Trigger: ATCACATTTTGATACCTGCCATGTAACATCTACTCC...GACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR CCA 90 bp AATAGCTATAAAGATGGGCTCCCAGGCTTAAGCAAGCACTCTACTCTATATTCCTTCTTATGGTATTGCTaGGTCTCTCAGGAATATGTA +
Preference number: 4 (lower is better)
Translates to: NSYKDGLPGLSKHSTLYSFLWYC*VSQEYV
Trigger: TACATATTCCTGAGAGACCCAGCAATACCATAAGAA...GGAATATAGAGTAGAGTGCTTGCTTAAGCCTGGGAGCCCATCTTTATAGCTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR CCA 90 bp GTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTCTGTAGGCTGTGCTCTCTATaGGGAAATCTACTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: VDVTWQVSKCDDQFCVFCRLCSL*GNLLSL
Trigger: CAGAGAGAGTAGATTTCCCCATAGAGAGCACAGCCT...ACAGAAAACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR CCA 90 bp TTAAACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGCTAAAGAAGCAGAATaGCATTTAAGTGACTGGGAG +
Preference number: 4 (lower is better)
Translates to: LNLLIWLNSQCIPESSTQAKEAE*HLSDWE
Trigger: CTCCCAGTCACTTAAATGCCATTCTGCTTCTTTAGC...CTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR CCA 90 bp CTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCAAAAACTATCCCTCTGGATaGTTGTTCAAGTGTACACAT +
Preference number: 4 (lower is better)
Translates to: LLIWLNSQCIPESSTQVKNYPSG*LFKCTH
Trigger: ATGTGTACACTTGAACAACCATCCAGAGGGATAGTT...TTTGACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR TCA 90 bp TCAGGAGTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTTAGGCCGATCCTGTaGTTCAATATTCTCCTCACA +
Preference number: 4 (lower is better)
Translates to: SGVDVTWQVSKCDDQFCVFRPIL*FNILLT
Trigger: TGTGAGGAGAATATTGAATCACAGGATCGGCCTAAA...AACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTACTCCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR TCA 90 bp CTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTATCAAACACGATCTAAGTCAATaGAATCATATCGAGAAGCTA +
Preference number: 4 (lower is better)
Translates to: LHGTTFIFRSRCYMAGIKHDLSQ*NHIEKL
Trigger: TAGCTTCTCGATATGATTTCATTGACTTAGATCGTG...TTTGATACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300141.11
ENST00000341861.9
ENST00000558786.5
CDS-3UTR TCA 90 bp CTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCAAACACGATCTAAGTCAATaGAATCATATCGAGAAGCTA +
Preference number: 4 (lower is better)
Translates to: LLIWLNSQCIPESSTQVKHDLSQ*NHIEKL
Trigger: TAGCTTCTCGATATGATTTCATTGACTTAGATCGTG...TTTGACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000341861.9
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR TCA 90 bp GTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTCTGTGAACTTTTCCTCCCCTaGATCATGTTACTCTGTAGC +
Preference number: 4 (lower is better)
Translates to: VDVTWQVSKCDDQFCVFCELFLP*IMLLCS
Trigger: GCTACAGAGTAACATGATTCAGGGGAGGAAAAGTTC...ACAGAAAACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR TCA 90 bp GTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTCTGTGCACCTGAAAGCCTATaGGCTCTCTTCATAGCTAAA +
Preference number: 4 (lower is better)
Translates to: VDVTWQVSKCDDQFCVFCAPESL*ALFIAK
Trigger: TTTAGCTATGAAGAGAGCTCATAGGCTTTCAGGTGC...ACAGAAAACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR TCA 90 bp TCAGGAGTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTATCTCAATTAGCACCTaGAAGCCTATGAGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: SGVDVTWQVSKCDDQFCVISIST*KPMSSL
Trigger: AAGAGAGCTCATAGGCTTTCAGGTGCTAATTGAGAT...AACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTACTCCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR TCA 90 bp ATTAGATTACTACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAAGAATGGCATTTAAGTaGCTGGGAGTGATAATAGAA +
Preference number: 4 (lower is better)
Translates to: IRLLPQTVDPCMAPHLFSRMAFK*LGVIIE
Trigger: TTCTATTATCACTCCCAGTCACTTAAATGCCATTCT...TGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGTAGTAATCTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR TCA 90 bp ATTAGATTACTACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAAAAGGCATACAGATGTaGAGTTACTCAGTGACTATT +
Preference number: 4 (lower is better)
Translates to: IRLLPQTVDPCMAPHLFSKGIQM*SYSVTI
Trigger: AATAGTCACTGAGTAACTTCACATCTGTATGCCTTT...TGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGTAGTAATCTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341861.9
CDS-3UTR GCA 90 bp TGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTATCAAAATCCATAGTCCAGTGTTaGCTGAAAAAGATCCAAAAG +
Preference number: 4 (lower is better)
Translates to: CMAPHLFSGVDVTWQVSKSIVQC*LKKIQK
Trigger: CTTTTGGATCTTTTTCAGGCAACACTGGACTATGGA...TTTTGATACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR GCA 90 bp AACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCTTCCGACTGTTCCAATaGGTTTTCTTTCTCTTAATA +
Preference number: 4 (lower is better)
Translates to: NLLIWLNSQCIPESSTQVFRLFQ*VFFLLI
Trigger: TATTAAGAGAAAGAAAACGCATTGGAACAGTCGGAA...GACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR GCA 90 bp AACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCAGTGACTTTAGGATTTaGTGTACCTGTTTTAGGATA +
Preference number: 4 (lower is better)
Translates to: NLLIWLNSQCIPESSTQVSDFRI*CTCFRI
Trigger: TATCCTAAAACAGGTACAGCAAATCCTAAAGTCACT...GACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR GCA 90 bp AATAGCTATAAAGATGGGCTCCCAGGCTTAAGCAAGCACTCTACTCTATATTCCAAAATTCCTTTGTTTTaGAAGTTGGGTCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: NSYKDGLPGLSKHSTLYSKIPLF*KLGHLQ
Trigger: CTGAAGATGACCCAACTTGCAAAACAAAGGAATTTT...GGAATATAGAGTAGAGTGCTTGCTTAAGCCTGGGAGCCCATCTTTATAGCTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR GCA 90 bp GTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTCTGTAAGCTAAGTGGCAAGTaGAGGAAAAACAGCGAGGTT +
Preference number: 4 (lower is better)
Translates to: VDVTWQVSKCDDQFCVFCKLSGK*RKNSEV
Trigger: AACCTCGCTGTTTTTCCTGCACTTGCCACTTAGCTT...ACAGAAAACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341861.9
CDS-3UTR GCA 90 bp AACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCTTGCTGCTGCCATGTTaGATTTTCCTGATTTTATTT +
Preference number: 4 (lower is better)
Translates to: NLLIWLNSQCIPESSTQVLLLPC*IFLILF
Trigger: AAATAAAATCAGGAAAATGCAACATGGCAGCAGCAA...GACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321147.10
ENST00000341861.9
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CCA 90 bp GACACACTCACCTTATATAGTTTAGAAATGGCCATGTCTCTTTTCTTACATCAATTGCGTAAATCCTTGTaGCCCTCCATCTTTTACGTG +
Preference number: 4 (lower is better)
Translates to: DTLTLYSLEMAMSLFLHQLRKSL*PSIFYV
Trigger: CACGTAAAAGATGGAGGGCCACAAGGATTTACGCAA...TTGATGTAAGAAAAGAGACATGGCCATTTCTAAACTATATAAGGTGAGTGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR CCA 90 bp TTCTACACAGGTCAAAATTATATCACTTTTAGAGCAGCAATACGTGATCCAAGGCATCTTCTTCCATGTTaGCTAGCTCATTGTGCACAT +
Preference number: 4 (lower is better)
Translates to: FYTGQNYITFRAAIRDPRHLLPC*LAHCAH
Trigger: ATGTGCACAATGAGCTAGCCAACATGGAAGAAGATG...CCTTGGATCACGTATTGCTGCTCTAAAAGTGATATAATTTTGACCTGTGTAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR CCA 90 bp CTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTATCAAACTATCAAATTCTTCTTaGAGAACAAAGGTAGCGACT +
Preference number: 4 (lower is better)
Translates to: LHGTTFIFRSRCYMAGIKLSNSS*RTKVAT
Trigger: AGTCGCTACCTTTGTTCTCCAAGAAGAATTTGATAG...TTTGATACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CCA 90 bp TGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTATCAAAAGAATTTTACCACCACTaGGAGTTGTTTCAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: CMAPHLFSGVDVTWQVSKEFYHH*ELFQLL
Trigger: CAAAAGCTGAAACAACTCCCAGTGGTGGTAAAATTC...TTTTGATACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CCA 90 bp TTAAACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGAATTTTACCACCACTaGGAGTTGTTTCAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: LNLLIWLNSQCIPESSTQEFYHH*ELFQLL
Trigger: CAAAAGCTGAAACAACTCCCAGTGGTGGTAAAATTC...CTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CCA 90 bp TCAGGAGTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTGAGTCCATCCAGCTCTaGCAATATATTCAACTCCTT +
Preference number: 4 (lower is better)
Translates to: SGVDVTWQVSKCDDQFCVESIQL*QYIQLL
Trigger: AAGGAGTTGAATATATTGCCAGAGCTGGATGGACTC...AACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTACTCCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CCA 90 bp TCAGGAGTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTAGCGATCTAGTAGGATaGACCAAGCATATTTTCCCT +
Preference number: 4 (lower is better)
Translates to: SGVDVTWQVSKCDDQFCVSDLVG*TKHIFP
Trigger: AGGGAAAATATGCTTGGTCCATCCTACTAGATCGCT...AACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTACTCCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CCA 90 bp TTAAACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGCTAAAGGGGAGTCTTTaGTGCCTTCAAAATATACCA +
Preference number: 4 (lower is better)
Translates to: LNLLIWLNSQCIPESSTQLKGSL*CLQNIP
Trigger: TGGTATATTTTGAAGGCACCAAAGACTCCCCTTTAG...CTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CCA 90 bp TTAAACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGAAGGGACACACAGTGTaGATTCTTCTGGTTACTATA +
Preference number: 4 (lower is better)
Translates to: LNLLIWLNSQCIPESSTQKGHTV*ILLVTI
Trigger: TATAGTAACCAGAAGAATCCACACTGTGTGTCCCTT...CTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR CCA 90 bp CGTCAATTTCTATTTGACCTCAGCATGTCCAATAACACTGGCAAACACAGTAACCTGAATCCAAAATGGTaGCCCAAAATTCCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: RQFLFDLSMSNNTGKHSNLNPKW*PKIPLF
Trigger: AAACAAAGGAATTTTGGGCCACCATTTTGGATTCAG...GTTACTGTGTTTGCCAGTGTTATTGGACATGCTGAGGTCAAATAGAAATTGACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR CCA 90 bp TACGTGATCCAAGGTTTTCTTGAAGGTAGTGCAAAAGATGCAGTTCATAATGTTCTGCTGAATCCAAAATaGTGGCCCAAAATTCCTTTG +
Preference number: 4 (lower is better)
Translates to: YVIQGFLEGSAKDAVHNVLLNPK*WPKIPL
Trigger: CAAAGGAATTTTGGGCCACCATTTTGGATTCAGCAG...AACATTATGAACTGCATCTTTTGCACTACCTTCAAGAAAACCTTGGATCACGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR CCA 90 bp TCAGGAGTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTCTGCTGAATCCAAAATaGTGGCCCAAAATTCCTTTG +
Preference number: 4 (lower is better)
Translates to: SGVDVTWQVSKCDDQFCVLLNPK*WPKIPL
Trigger: CAAAGGAATTTTGGGCCACCATTTTGGATTCAGCAG...AACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTACTCCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR CCA 90 bp TGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTATCAAAAACTTTTCTGCTTGCATaGCCACAGATCCTAAGTAAT +
Preference number: 4 (lower is better)
Translates to: CMAPHLFSGVDVTWQVSKTFLLA*PQILSN
Trigger: ATTACTTAGGATCTGTGGCCATGCAAGCAGAAAAGT...TTTTGATACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR TCA 90 bp GTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTCTGTTTTAGGCCGATCCTGTaGTTCAATATTCTCCTCACA +
Preference number: 4 (lower is better)
Translates to: VDVTWQVSKCDDQFCVFCFRPIL*FNILLT
Trigger: TGTGAGGAGAATATTGAATCACAGGATCGGCCTAAA...ACAGAAAACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR TCA 90 bp GTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTCTGTGTAATAGATTCTGTCTaGATGAGGTCCATCTGGATC +
Preference number: 4 (lower is better)
Translates to: VDVTWQVSKCDDQFCVFCVIDSV*MRSIWI
Trigger: GATCCAGATGGACCTCATTCAGACAGAATCTATTAC...ACAGAAAACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR TCA 90 bp GTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTCTGTATTCCACTACCGGCTTaGAACAGAAATGTTCCACTT +
Preference number: 4 (lower is better)
Translates to: VDVTWQVSKCDDQFCVFCIPLPA*NRNVPL
Trigger: AAGTGGAACATTTCTGTTTCAAGCCGGTAGTGGAAT...ACAGAAAACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR TCA 90 bp TGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTATCAAAAAATATACCAGCCTTCTaGCTTCATCAACTTGGATAT +
Preference number: 4 (lower is better)
Translates to: CMAPHLFSGVDVTWQVSKNIPAF*LHQLGY
Trigger: ATATCCAAGTTGATGAAGTCAGAAGGCTGGTATATT...TTTTGATACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR TCA 90 bp TTAAACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGAATATACCAGCCTTCTaGCTTCATCAACTTGGATAT +
Preference number: 4 (lower is better)
Translates to: LNLLIWLNSQCIPESSTQNIPAF*LHQLGY
Trigger: ATATCCAAGTTGATGAAGTCAGAAGGCTGGTATATT...CTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR TCA 90 bp TTAAACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGCACGATCTAAGTCAATaGAATCATATCGAGAAGCTA +
Preference number: 4 (lower is better)
Translates to: LNLLIWLNSQCIPESSTQHDLSQ*NHIEKL
Trigger: TAGCTTCTCGATATGATTTCATTGACTTAGATCGTG...CTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000341861.9
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR TCA 90 bp TTAAACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGCAAAGATTCTGGAACTaGACCAAACCAATCACTAAT +
Preference number: 4 (lower is better)
Translates to: LNLLIWLNSQCIPESSTQQRFWN*TKPITN
Trigger: ATTAGTGATTGGTTTGGTTCAGTTCCAGAATCTTTG...CTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR TCA 90 bp GTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTCTGTGTGCTGGCAAGACAGTaGTTTATTGATTCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: VDVTWQVSKCDDQFCVFCVLARQ*FIDSGF
Trigger: GAAACCAGAATCAATAAATCACTGTCTTGCCAGCAC...ACAGAAAACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR TCA 90 bp GTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTCTGTATCTCAATTAGCACCTaGAAGCCTATGAGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: VDVTWQVSKCDDQFCVFCISIST*KPMSSL
Trigger: AAGAGAGCTCATAGGCTTTCAGGTGCTAATTGAGAT...ACAGAAAACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR TCA 90 bp GTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTCTGTAATAGTTACCACAGATaGGCAGCTTCATGGACTACT +
Preference number: 4 (lower is better)
Translates to: VDVTWQVSKCDDQFCVFCNSYHR*AASWTT
Trigger: AGTAGTCCATGAAGCTGCTCATCTGTGGTAACTATT...ACAGAAAACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR GCA 90 bp TCAGGAGTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTCCATAGTCCAGTGTTaGCTGAAAAAGATCCAAAAG +
Preference number: 4 (lower is better)
Translates to: SGVDVTWQVSKCDDQFCVSIVQC*LKKIQK
Trigger: CTTTTGGATCTTTTTCAGGCAACACTGGACTATGGA...AACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTACTCCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR GCA 90 bp CAGCAATACGTGATCCAAGGTTTTCTTGAAGGTAGTGCAAAAGATGCAGTTCATTTCCGACTGTTCCAATaGGTTTTCTTTCTCTTAATA +
Preference number: 4 (lower is better)
Translates to: QQYVIQGFLEGSAKDAVHFRLFQ*VFFLLI
Trigger: TATTAAGAGAAAGAAAACGCATTGGAACAGTCGGAA...ATGAACTGCATCTTTTGCACTACCTTCAAGAAAACCTTGGATCACGTATTGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR GCA 90 bp ATTAGATTACTACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAAGTGACTTTAGGATTTaGTGTACCTGTTTTAGGATA +
Preference number: 4 (lower is better)
Translates to: IRLLPQTVDPCMAPHLFSSDFRI*CTCFRI
Trigger: TATCCTAAAACAGGTACAGCAAATCCTAAAGTCACT...TGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGTAGTAATCTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR GCA 90 bp CTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCAAAAAAATTCCTTTGTTTTaGAAGTTGGGTCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: LLIWLNSQCIPESSTQVKKIPLF*KLGHLQ
Trigger: CTGAAGATGACCCAACTTGCAAAACAAAGGAATTTT...TTTGACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAG
38% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR GCA 90 bp CTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCAAACAGCAGCATCTTTATTaGAACAAAGAACCTGTAATA +
Preference number: 4 (lower is better)
Translates to: LLIWLNSQCIPESSTQVKQQHLY*NKEPVI
Trigger: TATTACAGGTTCTTTGTTGCAATAAAGATGCTGCTG...TTTGACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR GCA 90 bp CGTCAATTTCTATTTGACCTCAGCATGTCCAATAACACTGGCAAACACAGTAACTTGCTGCTGCCATGTTaGATTTTCCTGATTTTATTT +
Preference number: 4 (lower is better)
Translates to: RQFLFDLSMSNNTGKHSNLLLPC*IFLILF
Trigger: AAATAAAATCAGGAAAATGCAACATGGCAGCAGCAA...GTTACTGTGTTTGCCAGTGTTATTGGACATGCTGAGGTCAAATAGAAATTGACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR GCA 90 bp GTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTCTGTGTAACTGCCTTACTGTaGAAAAGGAACATCGGATTC +
Preference number: 4 (lower is better)
Translates to: VDVTWQVSKCDDQFCVFCVTALL*KRNIGF
Trigger: GAATCCGATGTTCCTTTTGCACAGTAAGGCAGTTAC...ACAGAAAACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR CCA 90 bp TCAGGAGTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTAGCCATGATATTTTCTaGTATCGGCAAGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: SGVDVTWQVSKCDDQFCVSHDIF*YRQAAF
Trigger: AAAAGCTGCTTGCCGATACCAGAAAATATCATGGCT...AACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTACTCCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CCA 90 bp GTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTCTGTGAGTCCATCCAGCTCTaGCAATATATTCAACTCCTT +
Preference number: 4 (lower is better)
Translates to: VDVTWQVSKCDDQFCVFCESIQL*QYIQLL
Trigger: AAGGAGTTGAATATATTGCCAGAGCTGGATGGACTC...ACAGAAAACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CCA 90 bp TCAGGAGTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTCTAAAGGGGAGTCTTTaGTGCCTTCAAAATATACCA +
Preference number: 4 (lower is better)
Translates to: SGVDVTWQVSKCDDQFCVLKGSL*CLQNIP
Trigger: TGGTATATTTTGAAGGCACCAAAGACTCCCCTTTAG...AACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTACTCCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CCA 90 bp TCAGGAGTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTACTTTTCTGCTTGCATaGCCACAGATCCTAAGTAAT +
Preference number: 4 (lower is better)
Translates to: SGVDVTWQVSKCDDQFCVTFLLA*PQILSN
Trigger: ATTACTTAGGATCTGTGGCCATGCAAGCAGAAAAGT...AACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTACTCCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR CCA 90 bp TTAAACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGGGAAAATACTTTCTTaGGGAAGAAAGTTACCCAAA +
Preference number: 4 (lower is better)
Translates to: LNLLIWLNSQCIPESSTQGKILS*GRKLPK
Trigger: TTTGGGTAACTTTCTTCCCCAAGAAAGTATTTTCCC...CTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR CCA 90 bp GACACACTCACCTTATATAGTTTAGAAATGGCCATGTCTCTTTTCTTACATCAACCACCATGCCTAGCCTaGGAATACACATTTTTAAGA +
Preference number: 4 (lower is better)
Translates to: DTLTLYSLEMAMSLFLHQPPCLA*EYTFLR
Trigger: TCTTAAAAATGTGTATTCCCAGGCTAGGCATGGTGG...TTGATGTAAGAAAAGAGACATGGCCATTTCTAAACTATATAAGGTGAGTGTGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR TCA 90 bp TTCTACACAGGTCAAAATTATATCACTTTTAGAGCAGCAATACGTGATCCAAGGCACGATCTAAGTCAATaGAATCATATCGAGAAGCTA +
Preference number: 4 (lower is better)
Translates to: FYTGQNYITFRAAIRDPRHDLSQ*NHIEKL
Trigger: TAGCTTCTCGATATGATTTCATTGACTTAGATCGTG...CCTTGGATCACGTATTGCTGCTCTAAAAGTGATATAATTTTGACCTGTGTAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR TCA 90 bp TCAGGAGTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTCTGTGTTTTCTGTTaGTTAAACCTCCTCATTTGG +
Preference number: 4 (lower is better)
Translates to: SGVDVTWQVSKCDDQFCVFCVFC*LNLLIW
Trigger: CCAAATGAGGAGGTTTAATCAACAGAAAACACAGAA...AACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTACTCCTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR GCA 90 bp GTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTCTGTTCCATAGTCCAGTGTTaGCTGAAAAAGATCCAAAAG +
Preference number: 4 (lower is better)
Translates to: VDVTWQVSKCDDQFCVFCSIVQC*LKKIQK
Trigger: CTTTTGGATCTTTTTCAGGCAACACTGGACTATGGA...ACAGAAAACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR GCA 90 bp TGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTATCAAAAAGTGACTTTAGGATTTaGTGTACCTGTTTTAGGATA +
Preference number: 4 (lower is better)
Translates to: CMAPHLFSGVDVTWQVSKSDFRI*CTCFRI
Trigger: TATCCTAAAACAGGTACAGCAAATCCTAAAGTCACT...TTTTGATACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR GCA 90 bp TTAAACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGAGTGACTTTAGGATTTaGTGTACCTGTTTTAGGATA +
Preference number: 4 (lower is better)
Translates to: LNLLIWLNSQCIPESSTQSDFRI*CTCFRI
Trigger: TATCCTAAAACAGGTACAGCAAATCCTAAAGTCACT...CTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CCA 90 bp TACGTGATCCAAGGTTTTCTTGAAGGTAGTGCAAAAGATGCAGTTCATAATGTTCTATCAAATTCTTCTTaGAGAACAAAGGTAGCGACT +
Preference number: 4 (lower is better)
Translates to: YVIQGFLEGSAKDAVHNVLSNSS*RTKVAT
Trigger: AGTCGCTACCTTTGTTCTCCAAGAAGAATTTGATAG...AACATTATGAACTGCATCTTTTGCACTACCTTCAAGAAAACCTTGGATCACGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR CCA 90 bp TCAGGAGTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTCTATCAAATTCTTCTTaGAGAACAAAGGTAGCGACT +
Preference number: 4 (lower is better)
Translates to: SGVDVTWQVSKCDDQFCVLSNSS*RTKVAT
Trigger: AGTCGCTACCTTTGTTCTCCAAGAAGAATTTGATAG...AACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTACTCCTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CCA 90 bp GTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTCTGTAAGGGACACACAGTGTaGATTCTTCTGGTTACTATA +
Preference number: 4 (lower is better)
Translates to: VDVTWQVSKCDDQFCVFCKGHTV*ILLVTI
Trigger: TATAGTAACCAGAAGAATCCACACTGTGTGTCCCTT...ACAGAAAACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR TCA 90 bp GTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTCTGTAATATACCAGCCTTCTaGCTTCATCAACTTGGATAT +
Preference number: 4 (lower is better)
Translates to: VDVTWQVSKCDDQFCVFCNIPAF*LHQLGY
Trigger: ATATCCAAGTTGATGAAGTCAGAAGGCTGGTATATT...ACAGAAAACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR TCA 90 bp GACACACTCACCTTATATAGTTTAGAAATGGCCATGTCTCTTTTCTTACATCAATTCTGTGTTTTCTGTTaGTTAAACCTCCTCATTTGG +
Preference number: 4 (lower is better)
Translates to: DTLTLYSLEMAMSLFLHQFCVFC*LNLLIW
Trigger: CCAAATGAGGAGGTTTAATCAACAGAAAACACAGAA...TTGATGTAAGAAAAGAGACATGGCCATTTCTAAACTATATAAGGTGAGTGTGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR TCA 90 bp GTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTCTGTAGAATGGCATTTAAGTaGCTGGGAGTGATAATAGAA +
Preference number: 4 (lower is better)
Translates to: VDVTWQVSKCDDQFCVFCRMAFK*LGVIIE
Trigger: TTCTATTATCACTCCCAGTCACTTAAATGCCATTCT...ACAGAAAACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR GCA 90 bp TCAGGAGTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTAGTGACTTTAGGATTTaGTGTACCTGTTTTAGGATA +
Preference number: 4 (lower is better)
Translates to: SGVDVTWQVSKCDDQFCVSDFRI*CTCFRI
Trigger: TATCCTAAAACAGGTACAGCAAATCCTAAAGTCACT...AACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTACTCCTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CCA 90 bp GTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTCTGTCTATCAAATTCTTCTTaGAGAACAAAGGTAGCGACT +
Preference number: 4 (lower is better)
Translates to: VDVTWQVSKCDDQFCVFCLSNSS*RTKVAT
Trigger: AGTCGCTACCTTTGTTCTCCAAGAAGAATTTGATAG...ACAGAAAACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CCA 90 bp GACACACTCACCTTATATAGTTTAGAAATGGCCATGTCTCTTTTCTTACATCAACTGAATCCAAAATGGTaGCCCAAAATTCCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: DTLTLYSLEMAMSLFLHQLNPKW*PKIPLF
Trigger: AAACAAAGGAATTTTGGGCCACCATTTTGGATTCAG...TTGATGTAAGAAAAGAGACATGGCCATTTCTAAACTATATAAGGTGAGTGTGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR CCA 90 bp GTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTCTGTCTGAATCCAAAATGGTaGCCCAAAATTCCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: VDVTWQVSKCDDQFCVFCLNPKW*PKIPLF
Trigger: AAACAAAGGAATTTTGGGCCACCATTTTGGATTCAG...ACAGAAAACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR CCA 90 bp GTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTCTGTGGAGTAGATGTTACATaGCAGGTATCAAAATGTGAT +
Preference number: 4 (lower is better)
Translates to: VDVTWQVSKCDDQFCVFCGVDVT*QVSKCD
Trigger: ATCACATTTTGATACCTGCCATGTAACATCTACTCC...ACAGAAAACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR CCA 90 bp GTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTCTGTTTCTTATGGTATTGCTaGGTCTCTCAGGAATATGTA +
Preference number: 4 (lower is better)
Translates to: VDVTWQVSKCDDQFCVFCFLWYC*VSQEYV
Trigger: TACATATTCCTGAGAGACCCAGCAATACCATAAGAA...ACAGAAAACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR GCA 90 bp GTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTCTGTTTCCGACTGTTCCAATaGGTTTTCTTTCTCTTAATA +
Preference number: 4 (lower is better)
Translates to: VDVTWQVSKCDDQFCVFCFRLFQ*VFFLLI
Trigger: TATTAAGAGAAAGAAAACGCATTGGAACAGTCGGAA...ACAGAAAACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CCA 90 bp GTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTCTGTAAAAGAGAAAATTTCTaGAGGAGTATAGTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: VDVTWQVSKCDDQFCVFCKRENF*RSIVRK
Trigger: CTTCCTGACTATACTCCTCCAGAAATTTTCTCTTTT...ACAGAAAACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS GCA 90 bp CCCGGCCCCGCCCGGACCGTCCCGACGTGCGCTATGGAGCGGGCCTaGGCCGCTTCATGCTGCGCCGCCTCCACTCCGGTCCTGGTTGCA +
Preference number: 5 (lower is better)
Translates to: PGPARTVPTCAMERA*AASCCAASTPVLVA
Trigger: TGCAACCAGGACCGGAGTGGAGGCGGCGCAGCATGAAGCGGCGCAGGCCCGCTCCATAGCGCACGTCGGGACGGTCCGGGCGGGGCCGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000358939.8
ENST00000559526.5
ENST00000560194.1
ENST00000560665.1
CDS GCA 90 bp ACCGTCCCGACGTGCGCTATGGAGCGGGCCTGCGCCGCTTCATGCTaGGCCGCCTCCACTCCGGTCCTGGTTGCAGTGGCTTCCTCGGCG +
Preference number: 5 (lower is better)
Translates to: TVPTCAMERACAASC*AASTPVLVAVASSA
Trigger: CGCCGAGGAAGCCACTGCAACCAGGACCGGAGTGGAGGCGGCGCAGCATGAAGCGGCGCAGGCCCGCTCCATAGCGCACGTCGGGACGGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000358939.8
ENST00000559526.5
ENST00000560194.1
ENST00000560665.1
CDS GCA 90 bp CGGACCGTCCCGACGTGCGCTATGGAGCGGGCCTGCGCCGCTTCATaGTGCGCCGCCTCCACTCCGGTCCTGGTTGCAGTGGCTTCCTCG +
Preference number: 5 (lower is better)
Translates to: RTVPTCAMERACAAS*CAASTPVLVAVASS
Trigger: CGAGGAAGCCACTGCAACCAGGACCGGAGTGGAGGCGGCGCAGCATGAAGCGGCGCAGGCCCGCTCCATAGCGCACGTCGGGACGGTCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000358939.8
ENST00000559526.5
ENST00000560194.1
ENST00000560665.1
CDS TCA 90 bp GGAGGCCAGCGCCCAGAGCTCAAGGGGCGCCCAGTGAACGGTGGTTaGCTCGGAATCTCAGAGCCTCGGCTTCCTCTTCCGGCAAGTGGG +
Preference number: 5 (lower is better)
Translates to: GGQRPELKGRPVNGG*LGISEPRLPLPASG
Trigger: CCCACTTGCCGGAAGAGGAAGCCGAGGCTCTGAGATTCCGAGTCAACCACCGTTCACTGGGCGCCCCTTGAGCTCTGGGCGCTGGCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560436.1
CDS CCA 90 bp GCCAGGAGGCCAGCGCCCAGAGCTCAAGGGGCGCCCAGTGAACGGTaGTTGACTCGGAATCTCAGAGCCTCGGCTTCCTCTTCCGGCAAG +
Preference number: 5 (lower is better)
Translates to: ARRPAPRAQGAPSER*LTRNLRASASSSGK
Trigger: CTTGCCGGAAGAGGAAGCCGAGGCTCTGAGATTCCGAGTCAACCACCGTTCACTGGGCGCCCCTTGAGCTCTGGGCGCTGGCCTCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560436.1
CDS TCA 90 bp CGTGGAAGCCAGGAGGCCAGCGCCCAGAGCTCAAGGGGCGCCCAGTaGACGGTGGTTGACTCGGAATCTCAGAGCCTCGGCTTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: RGSQEASAQSSRGAQ*TVVDSESQSLGFLF
Trigger: GAAGAGGAAGCCGAGGCTCTGAGATTCCGAGTCAACCACCGTTCACTGGGCGCCCCTTGAGCTCTGGGCGCTGGCCTCCTGGCTTCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560436.1
CDS CCA 90 bp CCTGCTCTTCTCACAGGAATCTTTCCTTTCCTCACCATCAAAGCGTaGAAGCCAGGAGGCCAGCGCCCAGAGCTCAAGGGGCGCCCAGTG +
Preference number: 5 (lower is better)
Translates to: PALLTGIFPFLTIKA*KPGGQRPELKGRPV
Trigger: CACTGGGCGCCCCTTGAGCTCTGGGCGCTGGCCTCCTGGCTTCCACGCTTTGATGGTGAGGAAAGGAAAGATTCCTGTGAGAAGAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560436.1
CDS CCA 90 bp GAAGACAGGTGTGGCAGGAAAGGAAAGTGTCCTGCTGCGAGTGGGTaGAACAGAATGGGAGAGGGCAGTGAGCAGGGAGGGAATCGACCT +
Preference number: 5 (lower is better)
Translates to: EDRCGRKGKCPAASG*NRMGEGSEQGGNRP
Trigger: AGGTCGATTCCCTCCCTGCTCACTGCCCTCTCCCATTCTGTTCCACCCACTCGCAGCAGGACACTTTCCTTTCCTGCCACACCTGTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341861.9
CDS-3UTR CAA 90 bp ATTACTACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTCCACTCCGGTCCTGGTaGCAGTGGCTTCCTCGGCGG +
Preference number: 5 (lower is better)
Translates to: ITTTNRRPLHGTTFIFRSPLRSW*QWLPRR
Trigger: CCGCCGAGGAAGCCACTGCAACCAGGACCGGAGTGG...ACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGTAGTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000358939.8
CDS-3UTR CAA 90 bp ACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGGCAGTAGCAGCGGCCTaGGCCTCGGAGGCTTTAGCA +
Preference number: 5 (lower is better)
Translates to: TVDPCMAPHLFSGVDVTWAVAAA*ASEALA
Trigger: TGCTAAAGCCTCCGAGGCCAAGGCCGCTGCTACTGC...CCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000321147.10
CDS-3UTR CAA 90 bp GTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGCAGTAGCAGCGGCCTaGGCCTCGGAGGCTTTAGCA +
Preference number: 5 (lower is better)
Translates to: VDPCMAPHLFSGVDVTWQAVAAA*ASEALA
Trigger: TGCTAAAGCCTCCGAGGCCAAGGCCGCTGCTACTGC...CTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000321147.10
CDS TCA 90 bp AGCCACGGTCAGTCAGCCTTGTCACCTCTCCAGGATTTACGTAACTaGCTACGTACAGGTGATGCTCTAAAGGGGAGTCTTTGGTGCCTT +
Preference number: 5 (lower is better)
Translates to: SHGQSALSPLQDLRN*LRTGDALKGSLWCL
Trigger: AAGGCACCAAAGACTCCCCTTTAGAGCATCACCTGTACGTAGTCAGTTACGTAAATCCTGGAGAGGTGACAAGGCTGACTGACCGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558559.1
ENST00000558786.5
ENST00000559233.5
CDS CCA 90 bp GGCAAGTGCAGGAAAAACAGCGAGGTTATGCCAGCACAGCAACAATaGACTAAGATGTCAAGACACCTCATAGCACTAAGCCCCTCACTC +
Preference number: 5 (lower is better)
Translates to: GKCRKNSEVMPAQQQ*TKMSRHLIALSPSL
Trigger: GAGTGAGGGGCTTAGTGCTATGAGGTGTCTTGACATCTTAGTCCATTGTTGCTGTGCTGGCATAACCTCGCTGTTTTTCCTGCACTTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341861.9
CDS-3UTR CAA 90 bp ACTGGCTGTGTGGTCGTGGGTATATTTCCTCCTCTCTCTCTAGCATGTAGGTTGTACCACCACTGGGAGTaGTTTCAGCTTTTGGACACC +
Preference number: 5 (lower is better)
Translates to: TGCVVVGIFPPLSLACRLYHHWE*FQLLDT
Trigger: GGTGTCCAAAAGCTGAAACAACTCCCAGTGGTGGTA...CAACCTACATGCTAGAGAGAGAGGAGGAAATATACCCACGACCACACAGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS CCA 90 bp GAGGAATGCCAAGTCTTAGAAGAAAAGTGTGTGAGAAGACAGGTGTaGCAGGAAAGGAAAGTGTCCTGCTGCGAGTGGGTGGAACAGAAT +
Preference number: 5 (lower is better)
Translates to: EECQVLEEKCVRRQV*QERKVSCCEWVEQN
Trigger: ATTCTGTTCCACCCACTCGCAGCAGGACACTTTCCTTTCCTGCCACACCTGTCTTCTCACACACTTTTCTTCTAAGACTTGGCATTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341861.9
CDS-3UTR CAA 90 bp GACACACTCACCTTATATAGTTTAGAAATGGCCATGTCTCTTTTCTTACATCAACCACTCCGGTCCTGGTaGCAGTGGCTTCCTCGGCGG +
Preference number: 5 (lower is better)
Translates to: DTLTLYSLEMAMSLFLHQPLRSW*QWLPRR
Trigger: CCGCCGAGGAAGCCACTGCAACCAGGACCGGAGTGG...TTGATGTAAGAAAAGAGACATGGCCATTTCTAAACTATATAAGGTGAGTGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300141.11
CDS-3UTR CAA 90 bp GTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTCTGTCCACTCCGGTCCTGGTaGCAGTGGCTTCCTCGGCGG +
Preference number: 5 (lower is better)
Translates to: VDVTWQVSKCDDQFCVFCPLRSW*QWLPRR
Trigger: CCGCCGAGGAAGCCACTGCAACCAGGACCGGAGTGG...ACAGAAAACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000358939.8
CDS-3UTR CAA 90 bp ACTGGCTGTGTGGTCGTGGGTATATTTCCTCCTCTCTCTCTAGCATGTAGGTTGGAGTTGTTTCAGCTTTaGGACACCACCAATAGCCAG +
Preference number: 5 (lower is better)
Translates to: TGCVVVGIFPPLSLACRLELFQL*DTTNSQ
Trigger: CTGGCTATTGGTGGTGTCCAAAAGCTGAAACAACTC...CAACCTACATGCTAGAGAGAGAGGAGGAAATATACCCACGACCACACAGCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR CAA 90 bp AGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTGGATCCATCCGTATGTaGGGACAACTAGTTTCCACT +
Preference number: 5 (lower is better)
Translates to: RPLHGTTFIFRSRCYMAGGSIRM*GQLVST
Trigger: AGTGGAAACTAGTTGTCCCAACATACGGATGGATCC...ACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CAA 90 bp GTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGCAGCAGGGCATAATTTaGGATCCATCCGTATGTTGG +
Preference number: 5 (lower is better)
Translates to: VDPCMAPHLFSGVDVTWQQQGII*DPSVCW
Trigger: CCAACATACGGATGGATCCAAAATTATGCCCTGCTG...CTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CAA 90 bp AGCAGTAAACGATTTGGTTCAGAGGGGAACTTTTCTGCTTGCATGGCCACAGATCAGCAGGGCATAATTTaGGATCCATCCGTATGTTGG +
Preference number: 5 (lower is better)
Translates to: SSKRFGSEGNFSACMATDQQGII*DPSVCW
Trigger: CCAACATACGGATGGATCCAAAATTATGCCCTGCTG...ATCTGTGGCCATGCAAGCAGAAAAGTTCCCCTCTGAACCAAATCGTTTACTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR CAA 90 bp ACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGGAGTTGTTTCAGCTTTaGGACACCACCAATAGCCAG +
Preference number: 5 (lower is better)
Translates to: TVDPCMAPHLFSGVDVTWELFQL*DTTNSQ
Trigger: CTGGCTATTGGTGGTGTCCAAAAGCTGAAACAACTC...CCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS CCA 90 bp GGGATAAATAATTCAGGTGAGATCAACACTATCTGTAGGCGAGTCTaGGAGCGATCTAGTAGGATGGACCAAGCATATTTTCCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: GINNSGEINTICRRV*ERSSRMDQAYFPSG
Trigger: TCCTGAGGGAAAATATGCTTGGTCCATCCTACTAGATCGCTCCCAGACTCGCCTACAGATAGTGTTGATCTCACCTGAATTATTTATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CAA 90 bp AGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTTTGTTGCGTAAATCCTaGTGGCCCTCCATCTTTTAC +
Preference number: 5 (lower is better)
Translates to: RPLHGTTFIFRSRCYMAGLLRKS*WPSIFY
Trigger: GTAAAAGATGGAGGGCCACAAGGATTTACGCAACAA...ACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CAA 90 bp AGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTCTAGTTTCCACTAGATaGGGCCTTAAAGGTTGTTGC +
Preference number: 5 (lower is better)
Translates to: RPLHGTTFIFRSRCYMAGLVSTR*GLKGCC
Trigger: GCAACAACCTTTAAGGCCCAATCTAGTGGAAACTAG...ACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CAA 90 bp ATTACTACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTGGATCCATCCGTATGTaGGGACAACTAGTTTCCACT +
Preference number: 5 (lower is better)
Translates to: ITTTNRRPLHGTTFIFRSGSIRM*GQLVST
Trigger: AGTGGAAACTAGTTGTCCCAACATACGGATGGATCC...ACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGTAGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CAA 90 bp AACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCTACCACCACTGGGAGTaGTTTCAGCTTTTGGACACC +
Preference number: 5 (lower is better)
Translates to: NLLIWLNSQCIPESSTQVYHHWE*FQLLDT
Trigger: GGTGTCCAAAAGCTGAAACAACTCCCAGTGGTGGTA...GACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CAA 90 bp TTCATTCTGGTCAGGGTGACCCATATAACGTTCCGTGTATCCTGTATCATAGAATACCACCACTGGGAGTaGTTTCAGCTTTTGGACACC +
Preference number: 5 (lower is better)
Translates to: FILVRVTHITFRVSCIIEYHHWE*FQLLDT
Trigger: GGTGTCCAAAAGCTGAAACAACTCCCAGTGGTGGTA...TTCTATGATACAGGATACACGGAACGTTATATGGGTCACCCTGACCAGAATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR CAA 90 bp GTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGTCTTTGATAGGACACTaGAAATCACTTGGAGCAGGC +
Preference number: 5 (lower is better)
Translates to: VDPCMAPHLFSGVDVTWQSLIGH*KSLGAG
Trigger: GCCTGCTCCAAGTGATTTCAAGTGTCCTATCAAAGA...CTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CAA 90 bp ACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCCTTTGTTTTGCAAGTaGGGTCATCTTCAGGACTTG +
Preference number: 5 (lower is better)
Translates to: TVDPCMAPHLFSGVDVTWPLFCK*GHLQDL
Trigger: CAAGTCCTGAAGATGACCCAACTTGCAAAACAAAGG...CCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR CAA 90 bp GTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGCCTTTGTTTTGCAAGTaGGGTCATCTTCAGGACTTG +
Preference number: 5 (lower is better)
Translates to: VDPCMAPHLFSGVDVTWQPLFCK*GHLQDL
Trigger: CAAGTCCTGAAGATGACCCAACTTGCAAAACAAAGG...CTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR CAA 90 bp ACTGGCTGTGTGGTCGTGGGTATATTTCCTCCTCTCTCTCTAGCATGTAGGTTGGTAATTCTTATGGTATaGCTGGGTCTCTCAGGAATA +
Preference number: 5 (lower is better)
Translates to: TGCVVVGIFPPLSLACRLVILMV*LGLSGI
Trigger: TATTCCTGAGAGACCCAGCAATACCATAAGAATTAC...CAACCTACATGCTAGAGAGAGAGGAGGAAATATACCCACGACCACACAGCCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR CAA 90 bp ACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGGATCGCCTGGAAAGCTaGTTAGAAATGCACATTCCT +
Preference number: 5 (lower is better)
Translates to: TVDPCMAPHLFSGVDVTWDRLES*LEMHIP
Trigger: AGGAATGTGCATTTCTAACAAGCTTTCCAGGCGATC...CCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR CAA 90 bp AACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCGGATCCATCCGTATGTaGGGACAACTAGTTTCCACT +
Preference number: 5 (lower is better)
Translates to: NLLIWLNSQCIPESSTQVGSIRM*GQLVST
Trigger: AGTGGAAACTAGTTGTCCCAACATACGGATGGATCC...GACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CAA 90 bp AACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCCAGCAGGGCATAATTTaGGATCCATCCGTATGTTGG +
Preference number: 5 (lower is better)
Translates to: NLLIWLNSQCIPESSTQVQQGII*DPSVCW
Trigger: CCAACATACGGATGGATCCAAAATTATGCCCTGCTG...GACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CAA 90 bp AACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCGAGTTGTTTCAGCTTTaGGACACCACCAATAGCCAG +
Preference number: 5 (lower is better)
Translates to: NLLIWLNSQCIPESSTQVELFQL*DTTNSQ
Trigger: CTGGCTATTGGTGGTGTCCAAAAGCTGAAACAACTC...GACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CAA 90 bp CTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCAAATACCACCACTGGGAGTaGTTTCAGCTTTTGGACACC +
Preference number: 5 (lower is better)
Translates to: LLIWLNSQCIPESSTQVKYHHWE*FQLLDT
Trigger: GGTGTCCAAAAGCTGAAACAACTCCCAGTGGTGGTA...TTTGACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CAA 90 bp CAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATCTTTGATAGGACACTaGAAATCACTTGGAGCAGGC +
Preference number: 5 (lower is better)
Translates to: QTVDPCMAPHLFSGVDVTSLIGH*KSLGAG
Trigger: GCCTGCTCCAAGTGATTTCAAGTGTCCTATCAAAGA...TGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CAA 90 bp AACTGCCTTACTGTGCAAAAGGAACATCGGATTCTCATCATTTCCCAAAGCAGCTCTTTGATAGGACACTaGAAATCACTTGGAGCAGGC +
Preference number: 5 (lower is better)
Translates to: NCLTVQKEHRILIISQSSSLIGH*KSLGAG
Trigger: GCCTGCTCCAAGTGATTTCAAGTGTCCTATCAAAGA...GCTGCTTTGGGAAATGATGAGAATCCGATGTTCCTTTTGCACAGTAAGGCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR CAA 90 bp ACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTCTAAAGGGGAGTCTTaGGTGCCTTCAAAATATACC +
Preference number: 5 (lower is better)
Translates to: TTNRRPLHGTTFIFRSRCSKGES*VPSKYT
Trigger: GGTATATTTTGAAGGCACCAAAGACTCCCCTTTAGA...ACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CAA 90 bp AGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTTCTAAAGGGGAGTCTTaGGTGCCTTCAAAATATACC +
Preference number: 5 (lower is better)
Translates to: RPLHGTTFIFRSRCYMAGSKGES*VPSKYT
Trigger: GGTATATTTTGAAGGCACCAAAGACTCCCCTTTAGA...ACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CAA 90 bp CAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACAGGTCATCTTCAGGACTaGATAGCTTGTAAAGGGACA +
Preference number: 5 (lower is better)
Translates to: QTVDPCMAPHLFSGVDVTGHLQD*IACKGT
Trigger: TGTCCCTTTACAAGCTATCAAGTCCTGAAGATGACC...TGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR CAA 90 bp AACTGCCTTACTGTGCAAAAGGAACATCGGATTCTCATCATTTCCCAAAGCAGCCCTTTGTTTTGCAAGTaGGGTCATCTTCAGGACTTG +
Preference number: 5 (lower is better)
Translates to: NCLTVQKEHRILIISQSSPLFCK*GHLQDL
Trigger: CAAGTCCTGAAGATGACCCAACTTGCAAAACAAAGG...GCTGCTTTGGGAAATGATGAGAATCCGATGTTCCTTTTGCACAGTAAGGCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR CAA 90 bp CAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACACCTTTGTTTTGCAAGTaGGGTCATCTTCAGGACTTG +
Preference number: 5 (lower is better)
Translates to: QTVDPCMAPHLFSGVDVTPLFCK*GHLQDL
Trigger: CAAGTCCTGAAGATGACCCAACTTGCAAAACAAAGG...TGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR CAA 90 bp ACTGGCTGTGTGGTCGTGGGTATATTTCCTCCTCTCTCTCTAGCATGTAGGTTGCAAAATTCCTTTGTTTaGCAAGTTGGGTCATCTTCA +
Preference number: 5 (lower is better)
Translates to: TGCVVVGIFPPLSLACRLQNSFV*QVGSSS
Trigger: TGAAGATGACCCAACTTGCAAAACAAAGGAATTTTG...CAACCTACATGCTAGAGAGAGAGGAGGAAATATACCCACGACCACACAGCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR CAA 90 bp TATAAAGATGGGCTCCCAGGCTTAAGCAAGCACTCTACTCTATATTCCAATCCTAAAGAGAGCCATGGCTaGCCAGGGATTAGTTTATGG +
Preference number: 5 (lower is better)
Translates to: YKDGLPGLSKHSTLYSNPKESHG*PGISLW
Trigger: CCATAAACTAATCCCTGGCAAGCCATGGCTCTCTTT...AGGATTGGAATATAGAGTAGAGTGCTTGCTTAAGCCTGGGAGCCCATCTTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR CAA 90 bp ACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTGTGACCTAATCCTCTaGTATGAGGCTTTGGAAAAG +
Preference number: 5 (lower is better)
Translates to: TTNRRPLHGTTFIFRSRCCDLIL*YEALEK
Trigger: CTTTTCCAAAGCCTCATACAAGAGGATTAGGTCACA...ACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS GCA 90 bp AGGTCCATCTGGATCATTCCTCTTCACAAACATGAAATCATGTGGTaGCTTAGCCATCATGTAGCCATGATATTTTCTGGTATCGGCAAG +
Preference number: 5 (lower is better)
Translates to: RSIWIIPLHKHEIMW*LSHHVAMIFSGIGK
Trigger: CTTGCCGATACCAGAAAATATCATGGCTACATGATGGCTAAGGCACCACATGATTTCATGTTTGTGAAGAGGAATGATCCAGATGGACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558529.1
ENST00000559233.5
ENST00000559526.5
ENST00000560194.1
ENST00000560436.1
ENST00000560665.1
CDS CCA 90 bp ATGAGGTCCATCTGGATCATTCCTCTTCACAAACATGAAATCATGTaGTGCCTTAGCCATCATGTAGCCATGATATTTTCTGGTATCGGC +
Preference number: 5 (lower is better)
Translates to: MRSIWIIPLHKHEIM*CLSHHVAMIFSGIG
Trigger: GCCGATACCAGAAAATATCATGGCTACATGATGGCTAAGGCACCACATGATTTCATGTTTGTGAAGAGGAATGATCCAGATGGACCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558529.1
ENST00000559233.5
ENST00000559526.5
ENST00000560194.1
ENST00000560436.1
ENST00000560665.1
CDS-3UTR CAA 90 bp GTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGAAATGTTCCACTTCCTaGGTGATAATCGTAAGAAGC +
Preference number: 5 (lower is better)
Translates to: VDPCMAPHLFSGVDVTWQKCSTS*VIIVRS
Trigger: GCTTCTTACGATTATCACCAAGGAAGTGGAACATTT...CTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CAA 90 bp CAGCAATACGTGATCCAAGGTTTTCTTGAAGGTAGTGCAAAAGATGCAGTTCATGGATCCATCCGTATGTaGGGACAACTAGTTTCCACT +
Preference number: 5 (lower is better)
Translates to: QQYVIQGFLEGSAKDAVHGSIRM*GQLVST
Trigger: AGTGGAAACTAGTTGTCCCAACATACGGATGGATCC...ATGAACTGCATCTTTTGCACTACCTTCAAGAAAACCTTGGATCACGTATTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR CAA 90 bp CTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTATCAAACAGCAGGGCATAATTTaGGATCCATCCGTATGTTGG +
Preference number: 5 (lower is better)
Translates to: LHGTTFIFRSRCYMAGIKQQGII*DPSVCW
Trigger: CCAACATACGGATGGATCCAAAATTATGCCCTGCTG...TTTGATACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CAA 90 bp TGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTATCAAAATACCACCACTGGGAGTaGTTTCAGCTTTTGGACACC +
Preference number: 5 (lower is better)
Translates to: CMAPHLFSGVDVTWQVSKYHHWE*FQLLDT
Trigger: GGTGTCCAAAAGCTGAAACAACTCCCAGTGGTGGTA...TTTTGATACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CAA 90 bp ACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTTCCTCTTCGTGACTTaGGGGAAAAACATGAAAGAT +
Preference number: 5 (lower is better)
Translates to: TTNRRPLHGTTFIFRSRCFLFVT*GKNMKD
Trigger: ATCTTTCATGTTTTTCCCCAAAGTCACGAAGAGGAA...ACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CAA 90 bp AACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCTCTTTGATAGGACACTaGAAATCACTTGGAGCAGGC +
Preference number: 5 (lower is better)
Translates to: NLLIWLNSQCIPESSTQVSLIGH*KSLGAG
Trigger: GCCTGCTCCAAGTGATTTCAAGTGTCCTATCAAAGA...GACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CAA 90 bp AATAGCTATAAAGATGGGCTCCCAGGCTTAAGCAAGCACTCTACTCTATATTCCGGTCATCTTCAGGACTaGATAGCTTGTAAAGGGACA +
Preference number: 5 (lower is better)
Translates to: NSYKDGLPGLSKHSTLYSGHLQD*IACKGT
Trigger: TGTCCCTTTACAAGCTATCAAGTCCTGAAGATGACC...GGAATATAGAGTAGAGTGCTTGCTTAAGCCTGGGAGCCCATCTTTATAGCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR CAA 90 bp AACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCGGTCATCTTCAGGACTaGATAGCTTGTAAAGGGACA +
Preference number: 5 (lower is better)
Translates to: NLLIWLNSQCIPESSTQVGHLQD*IACKGT
Trigger: TGTCCCTTTACAAGCTATCAAGTCCTGAAGATGACC...GACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR CAA 90 bp AACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCCCTTTGTTTTGCAAGTaGGGTCATCTTCAGGACTTG +
Preference number: 5 (lower is better)
Translates to: NLLIWLNSQCIPESSTQVPLFCK*GHLQDL
Trigger: CAAGTCCTGAAGATGACCCAACTTGCAAAACAAAGG...GACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR CAA 90 bp ACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACTGGCCCAAAATTCCTTaGTTTTGCAAGTTGGGTCAT +
Preference number: 5 (lower is better)
Translates to: TNRRPLHGTTFIFRSRCYWPKIP*FCKLGH
Trigger: ATGACCCAACTTGCAAAACAAAGGAATTTTGGGCCA...GTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR CAA 90 bp AGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTGTAATTCTTATGGTATaGCTGGGTCTCTCAGGAATA +
Preference number: 5 (lower is better)
Translates to: RPLHGTTFIFRSRCYMAGVILMV*LGLSGI
Trigger: TATTCCTGAGAGACCCAGCAATACCATAAGAATTAC...ACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR CAA 90 bp GAAACAGCCTTAATGGGTGAGAGGTTTCAATGGAGTAGCTGCTTAAAAGCTACTGATCGCCTGGAAAGCTaGTTAGAAATGCACATTCCT +
Preference number: 5 (lower is better)
Translates to: ETALMGERFQWSSCLKATDRLES*LEMHIP
Trigger: AGGAATGTGCATTTCTAACAAGCTTTCCAGGCGATC...AGTAGCTTTTAAGCAGCTACTCCATTGAAACCTCTCACCCATTAAGGCTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR CAA 90 bp CAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGTGACCTAATCCTCTaGTATGAGGCTTTGGAAAAG +
Preference number: 5 (lower is better)
Translates to: QTVDPCMAPHLFSGVDVTCDLIL*YEALEK
Trigger: CTTTTCCAAAGCCTCATACAAGAGGATTAGGTCACA...TGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR CAA 90 bp ATTACTACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTATAGCTTTAGGACTCTaGAGTTTGGATCCACTCAAG +
Preference number: 5 (lower is better)
Translates to: ITTTNRRPLHGTTFIFRSIALGL*SLDPLK
Trigger: CTTGAGTGGATCCAAACTCAAGAGTCCTAAAGCTAT...ACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGTAGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341861.9
CDS TCA 90 bp GGAATACCGCTCAACATAAAAAGGCTCCAATTTAGGCCGATCCTGTaGTTCAATATTCTCCTCACAGTCCGCAGTTTCAAATATCTCAAC +
Preference number: 5 (lower is better)
Translates to: GIPLNIKRLQFRPIL*FNILLTVRSFKYLN
Trigger: GTTGAGATATTTGAAACTGCGGACTGTGAGGAGAATATTGAATCACAGGATCGGCCTAAATTGGAGCCTTTTTATGTTGAGCGGTATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558529.1
ENST00000559233.5
ENST00000559526.5
ENST00000560194.1
ENST00000560436.1
ENST00000560665.1
CDS GCA 90 bp CATGTCTTACTCAGCATGTCCAATAACACTGGCAAACACAGTAACTaGCTTACTGTGCAAAAGGAACATCGGATTCTCATCATTTCCCAA +
Preference number: 5 (lower is better)
Translates to: HVLLSMSNNTGKHSN*LTVQKEHRILIISQ
Trigger: TTGGGAAATGATGAGAATCCGATGTTCCTTTTGCACAGTAAGGCAGTTACTGTGTTTGCCAGTGTTATTGGACATGCTGAGTAAGACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560597.1
CDS-3UTR CAA 90 bp TCAGCATGTCCAATAACACTGGCAAACACAGTAACTGCCTTACTGTGCAAAAGGAAATGTTCCACTTCCTaGGTGATAATCGTAAGAAGC +
Preference number: 5 (lower is better)
Translates to: SACPITLANTVTALLCKRKCSTS*VIIVRS
Trigger: GCTTCTTACGATTATCACCAAGGAAGTGGAACATTT...CCTTTTGCACAGTAAGGCAGTTACTGTGTTTGCCAGTGTTATTGGACATGCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR CAA 90 bp CTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTATCAAATTGTTGCGTAAATCCTaGTGGCCCTCCATCTTTTAC +
Preference number: 5 (lower is better)
Translates to: LHGTTFIFRSRCYMAGIKLLRKS*WPSIFY
Trigger: GTAAAAGATGGAGGGCCACAAGGATTTACGCAACAA...TTTGATACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CAA 90 bp CGTCAATTTCTATTTGACCTCAGCATGTCCAATAACACTGGCAAACACAGTAACTTGTTGCGTAAATCCTaGTGGCCCTCCATCTTTTAC +
Preference number: 5 (lower is better)
Translates to: RQFLFDLSMSNNTGKHSNLLRKS*WPSIFY
Trigger: GTAAAAGATGGAGGGCCACAAGGATTTACGCAACAA...GTTACTGTGTTTGCCAGTGTTATTGGACATGCTGAGGTCAAATAGAAATTGACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR CAA 90 bp CTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCAAATTGTTGCGTAAATCCTaGTGGCCCTCCATCTTTTAC +
Preference number: 5 (lower is better)
Translates to: LLIWLNSQCIPESSTQVKLLRKS*WPSIFY
Trigger: GTAAAAGATGGAGGGCCACAAGGATTTACGCAACAA...TTTGACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CAA 90 bp ATTAGATTACTACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCACTAGTTTCCACTAGATaGGGCCTTAAAGGTTGTTGC +
Preference number: 5 (lower is better)
Translates to: IRLLPQTVDPCMAPHLFSLVSTR*GLKGCC
Trigger: GCAACAACCTTTAAGGCCCAATCTAGTGGAAACTAG...TGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGTAGTAATCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CAA 90 bp CTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCAAACTAGTTTCCACTAGATaGGGCCTTAAAGGTTGTTGC +
Preference number: 5 (lower is better)
Translates to: LLIWLNSQCIPESSTQVKLVSTR*GLKGCC
Trigger: GCAACAACCTTTAAGGCCCAATCTAGTGGAAACTAG...TTTGACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CAA 90 bp TTAAACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGGATCCATCCGTATGTaGGGACAACTAGTTTCCACT +
Preference number: 5 (lower is better)
Translates to: LNLLIWLNSQCIPESSTQGSIRM*GQLVST
Trigger: AGTGGAAACTAGTTGTCCCAACATACGGATGGATCC...CTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CAA 90 bp TCAGGAGTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTACCACCACTGGGAGTaGTTTCAGCTTTTGGACACC +
Preference number: 5 (lower is better)
Translates to: SGVDVTWQVSKCDDQFCVYHHWE*FQLLDT
Trigger: GGTGTCCAAAAGCTGAAACAACTCCCAGTGGTGGTA...AACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTACTCCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CAA 90 bp AACTGCCTTACTGTGCAAAAGGAACATCGGATTCTCATCATTTCCCAAAGCAGCTTCCTCTTCGTGACTTaGGGGAAAAACATGAAAGAT +
Preference number: 5 (lower is better)
Translates to: NCLTVQKEHRILIISQSSFLFVT*GKNMKD
Trigger: ATCTTTCATGTTTTTCCCCAAAGTCACGAAGAGGAA...GCTGCTTTGGGAAATGATGAGAATCCGATGTTCCTTTTGCACAGTAAGGCAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR CAA 90 bp AACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCTCTAAAGGGGAGTCTTaGGTGCCTTCAAAATATACC +
Preference number: 5 (lower is better)
Translates to: NLLIWLNSQCIPESSTQVSKGES*VPSKYT
Trigger: GGTATATTTTGAAGGCACCAAAGACTCCCCTTTAGA...GACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CAA 90 bp CTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCAAACCTTTGTTTTGCAAGTaGGGTCATCTTCAGGACTTG +
Preference number: 5 (lower is better)
Translates to: LLIWLNSQCIPESSTQVKPLFCK*GHLQDL
Trigger: CAAGTCCTGAAGATGACCCAACTTGCAAAACAAAGG...TTTGACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR CAA 90 bp TTGACCTCAGCATGTCCAATAACACTGGCAAACACAGTAACTGCCTTACTGTGCCAAAATTCCTTTGTTTaGCAAGTTGGGTCATCTTCA +
Preference number: 5 (lower is better)
Translates to: LTSACPITLANTVTALLCQNSFV*QVGSSS
Trigger: TGAAGATGACCCAACTTGCAAAACAAAGGAATTTTG...GCACAGTAAGGCAGTTACTGTGTTTGCCAGTGTTATTGGACATGCTGAGGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR CAA 90 bp ACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGAGGAATATGTATCATTaGATTTTGAGCATGTGGGGT +
Preference number: 5 (lower is better)
Translates to: TVDPCMAPHLFSGVDVTWRNMYH*ILSMWG
Trigger: ACCCCACATGCTCAAAATCAAATGATACATATTCCT...CCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR CAA 90 bp CAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATATCCCTCTGGATGGTaGTTCAAGTGTACACATTTA +
Preference number: 5 (lower is better)
Translates to: QTVDPCMAPHLFSGVDVTYPSGW*FKCTHL
Trigger: TAAATGTGTACACTTGAACAACCATCCAGAGGGATA...TGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR CAA 90 bp ACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACTATCCCTCTGGATGGTaGTTCAAGTGTACACATTTA +
Preference number: 5 (lower is better)
Translates to: TNRRPLHGTTFIFRSRCYYPSGW*FKCTHL
Trigger: TAAATGTGTACACTTGAACAACCATCCAGAGGGATA...GTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR CAA 90 bp ATTACTACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTGTGCATTCCATTTTCTaGCTGCATTACTCTGAGAAT +
Preference number: 5 (lower is better)
Translates to: ITTTNRRPLHGTTFIFRSVHSIF*LHYSEN
Trigger: ATTCTCAGAGTAATGCAGCAAGAAAATGGAATGCAC...ACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGTAGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341861.9
CDS-3UTR CAA 90 bp AGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTATTGCTGCTGCCATGTaGCATTTTCCTGATTTTATT +
Preference number: 5 (lower is better)
Translates to: RPLHGTTFIFRSRCYMAGIAAAM*HFPDFI
Trigger: AATAAAATCAGGAAAATGCAACATGGCAGCAGCAAT...ACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000321147.10
ENST00000341861.9
CDS-3UTR CAA 90 bp AACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCATCGTCAATTTCTATTaGACCCTGAGGACCACCATA +
Preference number: 5 (lower is better)
Translates to: NLLIWLNSQCIPESSTQVIVNFY*TLRTTI
Trigger: TATGGTGGTCCTCAGGGTCAAATAGAAATTGACGAT...GACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558786.5
CDS-3UTR CAA 90 bp AACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCAAATGTTCCACTTCCTaGGTGATAATCGTAAGAAGC +
Preference number: 5 (lower is better)
Translates to: NLLIWLNSQCIPESSTQVKCSTS*VIIVRS
Trigger: GCTTCTTACGATTATCACCAAGGAAGTGGAACATTT...GACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CAA 90 bp CTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTATCAAAAATTCCACTACCGGCTaGAAACAGAAATGTTCCACT +
Preference number: 5 (lower is better)
Translates to: LHGTTFIFRSRCYMAGIKNSTTG*KQKCST
Trigger: AGTGGAACATTTCTGTTTCAAGCCGGTAGTGGAATT...TTTGATACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CAA 90 bp TTAAACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGTTGTTGCGTAAATCCTaGTGGCCCTCCATCTTTTAC +
Preference number: 5 (lower is better)
Translates to: LNLLIWLNSQCIPESSTQLLRKS*WPSIFY
Trigger: GTAAAAGATGGAGGGCCACAAGGATTTACGCAACAA...CTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CAA 90 bp CAAAATGGACATTCTCATCCAGGAAACCATGTAAGAGCAGTAAACGATTTGGTTCTAGTTTCCACTAGATaGGGCCTTAAAGGTTGTTGC +
Preference number: 5 (lower is better)
Translates to: QNGHSHPGNHVRAVNDLVLVSTR*GLKGCC
Trigger: GCAACAACCTTTAAGGCCCAATCTAGTGGAAACTAG...AACCAAATCGTTTACTGCTCTTACATGGTTTCCTGGATGAGAATGTCCATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR CAA 90 bp TCAGGAGTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTGAGTTGTTTCAGCTTTaGGACACCACCAATAGCCAG +
Preference number: 5 (lower is better)
Translates to: SGVDVTWQVSKCDDQFCVELFQL*DTTNSQ
Trigger: CTGGCTATTGGTGGTGTCCAAAAGCTGAAACAACTC...AACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTACTCCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CAA 90 bp AACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCTTCCTCTTCGTGACTTaGGGGAAAAACATGAAAGAT +
Preference number: 5 (lower is better)
Translates to: NLLIWLNSQCIPESSTQVFLFVT*GKNMKD
Trigger: ATCTTTCATGTTTTTCCCCAAAGTCACGAAGAGGAA...GACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CAA 90 bp TTAAACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGTCTTTGATAGGACACTaGAAATCACTTGGAGCAGGC +
Preference number: 5 (lower is better)
Translates to: LNLLIWLNSQCIPESSTQSLIGH*KSLGAG
Trigger: GCCTGCTCCAAGTGATTTCAAGTGTCCTATCAAAGA...CTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CAA 90 bp ATTACTACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTATTGCTATCTCCTCTTaGATAGGACACTTGAAATCA +
Preference number: 5 (lower is better)
Translates to: ITTTNRRPLHGTTFIFRSIAISS*IGHLKS
Trigger: TGATTTCAAGTGTCCTATCAAAGAGGAGATAGCAAT...ACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGTAGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CAA 90 bp ACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATTGCTATCTCCTCTTaGATAGGACACTTGAAATCA +
Preference number: 5 (lower is better)
Translates to: TNRRPLHGTTFIFRSRCYIAISS*IGHLKS
Trigger: TGATTTCAAGTGTCCTATCAAAGAGGAGATAGCAAT...GTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CAA 90 bp ATTAGATTACTACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCATCTAAAGGGGAGTCTTaGGTGCCTTCAAAATATACC +
Preference number: 5 (lower is better)
Translates to: IRLLPQTVDPCMAPHLFSSKGES*VPSKYT
Trigger: GGTATATTTTGAAGGCACCAAAGACTCCCCTTTAGA...TGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGTAGTAATCTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CAA 90 bp TTAAACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGGTCATCTTCAGGACTaGATAGCTTGTAAAGGGACA +
Preference number: 5 (lower is better)
Translates to: LNLLIWLNSQCIPESSTQGHLQD*IACKGT
Trigger: TGTCCCTTTACAAGCTATCAAGTCCTGAAGATGACC...CTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR CAA 90 bp CTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCAAATGGCCCAAAATTCCTTaGTTTTGCAAGTTGGGTCAT +
Preference number: 5 (lower is better)
Translates to: LLIWLNSQCIPESSTQVKWPKIP*FCKLGH
Trigger: ATGACCCAACTTGCAAAACAAAGGAATTTTGGGCCA...TTTGACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR CAA 90 bp ATTACTACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAGGAGTTTCAAGCGGAAATACTaGACTCCTTTAAACCGATTA +
Preference number: 5 (lower is better)
Translates to: ITTTNRRPLHGTTFIFRSFKRKY*TPLNRL
Trigger: TAATCGGTTTAAAGGAGTCAAGTATTTCCGCTTGAA...ACTCCTGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGTAGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
CDS-3UTR CAA 90 bp TCAGGAGTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTAAAGAGAGCCATGGCTaGCCAGGGATTAGTTTATGG +
Preference number: 5 (lower is better)
Translates to: SGVDVTWQVSKCDDQFCVKESHG*PGISLW
Trigger: CCATAAACTAATCCCTGGCAAGCCATGGCTCTCTTT...AACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTACTCCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR CAA 90 bp TCTCATCCAGGAAACCATGTAAGAGCAGTAAACGATTTGGTTCAGAGGGGAACTATTGCTGCTGCCATGTaGCATTTTCCTGATTTTATT +
Preference number: 5 (lower is better)
Translates to: SHPGNHVRAVNDLVQRGTIAAAM*HFPDFI
Trigger: AATAAAATCAGGAAAATGCAACATGGCAGCAGCAAT...AGTTCCCCTCTGAACCAAATCGTTTACTGCTCTTACATGGTTTCCTGGATGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR CAA 90 bp TCAGCATGTCCAATAACACTGGCAAACACAGTAACTGCCTTACTGTGCAAAAGGATCGTCAATTTCTATTaGACCTCAGCATGTCCAATA +
Preference number: 5 (lower is better)
Translates to: SACPITLANTVTALLCKRIVNFY*TSACPI
Trigger: TATTGGACATGCTGAGGTCAAATAGAAATTGACGAT...CCTTTTGCACAGTAAGGCAGTTACTGTGTTTGCCAGTGTTATTGGACATGCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS TCA 90 bp ACTCAGAAAATAGCTTTAGGACTCTTGAGTTTGGATCCACTCAAGTaGAATTCCTTAATTTTTAACTCAAGGGCCAAACAGCCGTCCACT +
Preference number: 5 (lower is better)
Translates to: TQKIALGLLSLDPLK*NSLIFNSRAKQPST
Trigger: AGTGGACGGCTGTTTGGCCCTTGAGTTAAAAATTAAGGAATTTCACTTGAGTGGATCCAAACTCAAGAGTCCTAAAGCTATTTTCTGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341861.9
CDS GCA 90 bp ATAATTAGTGGCGTCACAGAATCAGGCACTGACTCAATGAGTCTCTaGCTTTCCATAACATCATCTTCTACTGGGATAAATAATTCAGGT +
Preference number: 5 (lower is better)
Translates to: IISGVTESGTDSMSL*LSITSSSTGINNSG
Trigger: ACCTGAATTATTTATCCCAGTAGAAGATGATGTTATGGAAAGGCAGAGACTCATTGAGTCAGTGCCTGATTCTGTGACGCCACTAATTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CAA 90 bp TGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTATCAAAAAATTCCACTACCGGCTaGAAACAGAAATGTTCCACT +
Preference number: 5 (lower is better)
Translates to: CMAPHLFSGVDVTWQVSKNSTTG*KQKCST
Trigger: AGTGGAACATTTCTGTTTCAAGCCGGTAGTGGAATT...TTTTGATACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CAA 90 bp TTAAACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGAATTCCACTACCGGCTaGAAACAGAAATGTTCCACT +
Preference number: 5 (lower is better)
Translates to: LNLLIWLNSQCIPESSTQNSTTG*KQKCST
Trigger: AGTGGAACATTTCTGTTTCAAGCCGGTAGTGGAATT...CTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CAA 90 bp GACACACTCACCTTATATAGTTTAGAAATGGCCATGTCTCTTTTCTTACATCAAGGATCCATCCGTATGTaGGGACAACTAGTTTCCACT +
Preference number: 5 (lower is better)
Translates to: DTLTLYSLEMAMSLFLHQGSIRM*GQLVST
Trigger: AGTGGAAACTAGTTGTCCCAACATACGGATGGATCC...TTGATGTAAGAAAAGAGACATGGCCATTTCTAAACTATATAAGGTGAGTGTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR CAA 90 bp GTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTCTGTCAGCAGGGCATAATTTaGGATCCATCCGTATGTTGG +
Preference number: 5 (lower is better)
Translates to: VDVTWQVSKCDDQFCVFCQQGII*DPSVCW
Trigger: CCAACATACGGATGGATCCAAAATTATGCCCTGCTG...ACAGAAAACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CAA 90 bp GACACACTCACCTTATATAGTTTAGAAATGGCCATGTCTCTTTTCTTACATCAAGAGTTGTTTCAGCTTTaGGACACCACCAATAGCCAG +
Preference number: 5 (lower is better)
Translates to: DTLTLYSLEMAMSLFLHQELFQL*DTTNSQ
Trigger: CTGGCTATTGGTGGTGTCCAAAAGCTGAAACAACTC...TTGATGTAAGAAAAGAGACATGGCCATTTCTAAACTATATAAGGTGAGTGTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR CAA 90 bp AATAGCTATAAAGATGGGCTCCCAGGCTTAAGCAAGCACTCTACTCTATATTCCATTGCTATCTCCTCTTaGATAGGACACTTGAAATCA +
Preference number: 5 (lower is better)
Translates to: NSYKDGLPGLSKHSTLYSIAISS*IGHLKS
Trigger: TGATTTCAAGTGTCCTATCAAAGAGGAGATAGCAAT...GGAATATAGAGTAGAGTGCTTGCTTAAGCCTGGGAGCCCATCTTTATAGCTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR CAA 90 bp AACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCATTGCTATCTCCTCTTaGATAGGACACTTGAAATCA +
Preference number: 5 (lower is better)
Translates to: NLLIWLNSQCIPESSTQVIAISS*IGHLKS
Trigger: TGATTTCAAGTGTCCTATCAAAGAGGAGATAGCAAT...GACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CAA 90 bp TGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTATCAAAATCTAAAGGGGAGTCTTaGGTGCCTTCAAAATATACC +
Preference number: 5 (lower is better)
Translates to: CMAPHLFSGVDVTWQVSKSKGES*VPSKYT
Trigger: GGTATATTTTGAAGGCACCAAAGACTCCCCTTTAGA...TTTTGATACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CAA 90 bp TCAGGAGTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTCCTTTGTTTTGCAAGTaGGGTCATCTTCAGGACTTG +
Preference number: 5 (lower is better)
Translates to: SGVDVTWQVSKCDDQFCVPLFCK*GHLQDL
Trigger: CAAGTCCTGAAGATGACCCAACTTGCAAAACAAAGG...AACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTACTCCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR CAA 90 bp AATAGCTATAAAGATGGGCTCCCAGGCTTAAGCAAGCACTCTACTCTATATTCCCAAAATTCCTTTGTTTaGCAAGTTGGGTCATCTTCA +
Preference number: 5 (lower is better)
Translates to: NSYKDGLPGLSKHSTLYSQNSFV*QVGSSS
Trigger: TGAAGATGACCCAACTTGCAAAACAAAGGAATTTTG...GGAATATAGAGTAGAGTGCTTGCTTAAGCCTGGGAGCCCATCTTTATAGCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR CAA 90 bp TTAAACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGTGGCCCAAAATTCCTTaGTTTTGCAAGTTGGGTCAT +
Preference number: 5 (lower is better)
Translates to: LNLLIWLNSQCIPESSTQWPKIP*FCKLGH
Trigger: ATGACCCAACTTGCAAAACAAAGGAATTTTGGGCCA...CTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR CAA 90 bp AACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCTTCAAGCGGAAATACTaGACTCCTTTAAACCGATTA +
Preference number: 5 (lower is better)
Translates to: NLLIWLNSQCIPESSTQVFKRKY*TPLNRL
Trigger: TAATCGGTTTAAAGGAGTCAAGTATTTCCGCTTGAA...GACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CAA 90 bp CTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCAAAGTAATTCTTATGGTATaGCTGGGTCTCTCAGGAATA +
Preference number: 5 (lower is better)
Translates to: LLIWLNSQCIPESSTQVKVILMV*LGLSGI
Trigger: TATTCCTGAGAGACCCAGCAATACCATAAGAATTAC...TTTGACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR CAA 90 bp AACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCTCAGCAGCATCTTTATaGCAACAAAGAACCTGTAAT +
Preference number: 5 (lower is better)
Translates to: NLLIWLNSQCIPESSTQVSAASL*QQRTCN
Trigger: ATTACAGGTTCTTTGTTGCAATAAAGATGCTGCTGA...GACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR CAA 90 bp AACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCATTGCTGCTGCCATGTaGCATTTTCCTGATTTTATT +
Preference number: 5 (lower is better)
Translates to: NLLIWLNSQCIPESSTQVIAAAM*HFPDFI
Trigger: AATAAAATCAGGAAAATGCAACATGGCAGCAGCAAT...GACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321147.10
ENST00000341861.9
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CAA 90 bp TTAAACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGAAATGTTCCACTTCCTaGGTGATAATCGTAAGAAGC +
Preference number: 5 (lower is better)
Translates to: LNLLIWLNSQCIPESSTQKCSTS*VIIVRS
Trigger: GCTTCTTACGATTATCACCAAGGAAGTGGAACATTT...CTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CAA 90 bp TGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTATCAAAAAAATGTTCCACTTCCTaGGTGATAATCGTAAGAAGC +
Preference number: 5 (lower is better)
Translates to: CMAPHLFSGVDVTWQVSKKCSTS*VIIVRS
Trigger: GCTTCTTACGATTATCACCAAGGAAGTGGAACATTT...TTTTGATACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCA
39% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CAA 90 bp TACGTGATCCAAGGTTTTCTTGAAGGTAGTGCAAAAGATGCAGTTCATAATGTTAATTCCACTACCGGCTaGAAACAGAAATGTTCCACT +
Preference number: 5 (lower is better)
Translates to: YVIQGFLEGSAKDAVHNVNSTTG*KQKCST
Trigger: AGTGGAACATTTCTGTTTCAAGCCGGTAGTGGAATT...AACATTATGAACTGCATCTTTTGCACTACCTTCAAGAAAACCTTGGATCACGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR CAA 90 bp TCAGGAGTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTAATTCCACTACCGGCTaGAAACAGAAATGTTCCACT +
Preference number: 5 (lower is better)
Translates to: SGVDVTWQVSKCDDQFCVNSTTG*KQKCST
Trigger: AGTGGAACATTTCTGTTTCAAGCCGGTAGTGGAATT...AACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTACTCCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CAA 90 bp GTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTCTGTTTGTTGCGTAAATCCTaGTGGCCCTCCATCTTTTAC +
Preference number: 5 (lower is better)
Translates to: VDVTWQVSKCDDQFCVFCLLRKS*WPSIFY
Trigger: GTAAAAGATGGAGGGCCACAAGGATTTACGCAACAA...ACAGAAAACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CAA 90 bp GTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTCTGTCTAGTTTCCACTAGATaGGGCCTTAAAGGTTGTTGC +
Preference number: 5 (lower is better)
Translates to: VDVTWQVSKCDDQFCVFCLVSTR*GLKGCC
Trigger: GCAACAACCTTTAAGGCCCAATCTAGTGGAAACTAG...ACAGAAAACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CAA 90 bp GTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTCTGTTCTTTGATAGGACACTaGAAATCACTTGGAGCAGGC +
Preference number: 5 (lower is better)
Translates to: VDVTWQVSKCDDQFCVFCSLIGH*KSLGAG
Trigger: GCCTGCTCCAAGTGATTTCAAGTGTCCTATCAAAGA...ACAGAAAACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CAA 90 bp ATTAGATTACTACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAATTGCTATCTCCTCTTaGATAGGACACTTGAAATCA +
Preference number: 5 (lower is better)
Translates to: IRLLPQTVDPCMAPHLFSIAISS*IGHLKS
Trigger: TGATTTCAAGTGTCCTATCAAAGAGGAGATAGCAAT...TGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGTAGTAATCTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
CDS-3UTR CAA 90 bp CGTCAATTTCTATTTGACCTCAGCATGTCCAATAACACTGGCAAACACAGTAACATTGCTATCTCCTCTTaGATAGGACACTTGAAATCA +
Preference number: 5 (lower is better)
Translates to: RQFLFDLSMSNNTGKHSNIAISS*IGHLKS
Trigger: TGATTTCAAGTGTCCTATCAAAGAGGAGATAGCAAT...GTTACTGTGTTTGCCAGTGTTATTGGACATGCTGAGGTCAAATAGAAATTGACG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR CAA 90 bp GTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTCTGTGGTCATCTTCAGGACTaGATAGCTTGTAAAGGGACA +
Preference number: 5 (lower is better)
Translates to: VDVTWQVSKCDDQFCVFCGHLQD*IACKGT
Trigger: TGTCCCTTTACAAGCTATCAAGTCCTGAAGATGACC...ACAGAAAACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR CAA 90 bp ATTAGATTACTACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCACAAAATTCCTTTGTTTaGCAAGTTGGGTCATCTTCA +
Preference number: 5 (lower is better)
Translates to: IRLLPQTVDPCMAPHLFSQNSFV*QVGSSS
Trigger: TGAAGATGACCCAACTTGCAAAACAAAGGAATTTTG...TGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGTAGTAATCTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR CAA 90 bp CTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCAAACAAAATTCCTTTGTTTaGCAAGTTGGGTCATCTTCA +
Preference number: 5 (lower is better)
Translates to: LLIWLNSQCIPESSTQVKQNSFV*QVGSSS
Trigger: TGAAGATGACCCAACTTGCAAAACAAAGGAATTTTG...TTTGACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR CAA 90 bp TTCTACACAGGTCAAAATTATATCACTTTTAGAGCAGCAATACGTGATCCAAGGTGGCCCAAAATTCCTTaGTTTTGCAAGTTGGGTCAT +
Preference number: 5 (lower is better)
Translates to: FYTGQNYITFRAAIRDPRWPKIP*FCKLGH
Trigger: ATGACCCAACTTGCAAAACAAAGGAATTTTGGGCCA...CCTTGGATCACGTATTGCTGCTCTAAAAGTGATATAATTTTGACCTGTGTAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000395652.7
CDS-3UTR CAA 90 bp CTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGGTCAAATTCAAGCGGAAATACTaGACTCCTTTAAACCGATTA +
Preference number: 5 (lower is better)
Translates to: LLIWLNSQCIPESSTQVKFKRKY*TPLNRL
Trigger: TAATCGGTTTAAAGGAGTCAAGTATTTCCGCTTGAA...TTTGACCTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CAA 90 bp ATTAGATTACTACCACAAACCGTAGACCCCTGCATGGCACCACATTTATTTTCAAGGAATATGTATCATTaGATTTTGAGCATGTGGGGT +
Preference number: 5 (lower is better)
Translates to: IRLLPQTVDPCMAPHLFSRNMYH*ILSMWG
Trigger: ACCCCACATGCTCAAAATCAAATGATACATATTCCT...TGAAAATAAATGTGGTGCCATGCAGGGGTCTACGGTTTGTGGTAGTAATCTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS GCA 90 bp CACTTCCTTGGTGATAATCGTAAGAAGCAATTCCGACTGTTCCAATaGGTTTTCTTTCTCTTAATAGTTCTTCTTCTCGAGAATACATTC +
Preference number: 5 (lower is better)
Translates to: HFLGDNRKKQFRLFQ*VFFLLIVLLLENTF
Trigger: GAATGTATTCTCGAGAAGAAGAACTATTAAGAGAAAGAAAACGCATTGGAACAGTCGGAATTGCTTCTTACGATTATCACCAAGGAAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558529.1
ENST00000559233.5
CDS-3UTR CAA 90 bp GACACACTCACCTTATATAGTTTAGAAATGGCCATGTCTCTTTTCTTACATCAAAATTCCACTACCGGCTaGAAACAGAAATGTTCCACT +
Preference number: 5 (lower is better)
Translates to: DTLTLYSLEMAMSLFLHQNSTTG*KQKCST
Trigger: AGTGGAACATTTCTGTTTCAAGCCGGTAGTGGAATT...TTGATGTAAGAAAAGAGACATGGCCATTTCTAAACTATATAAGGTGAGTGTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR CAA 90 bp TCAGGAGTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTCCTCTTCGTGACTTaGGGGAAAAACATGAAAGAT +
Preference number: 5 (lower is better)
Translates to: SGVDVTWQVSKCDDQFCVFLFVT*GKNMKD
Trigger: ATCTTTCATGTTTTTCCCCAAAGTCACGAAGAGGAA...AACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTACTCCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CAA 90 bp GTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTCTGTTGGCCCAAAATTCCTTaGTTTTGCAAGTTGGGTCAT +
Preference number: 5 (lower is better)
Translates to: VDVTWQVSKCDDQFCVFCWPKIP*FCKLGH
Trigger: ATGACCCAACTTGCAAAACAAAGGAATTTTGGGCCA...ACAGAAAACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR CAA 90 bp TTAAACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGTTCAAGCGGAAATACTaGACTCCTTTAAACCGATTA +
Preference number: 5 (lower is better)
Translates to: LNLLIWLNSQCIPESSTQFKRKY*TPLNRL
Trigger: TAATCGGTTTAAAGGAGTCAAGTATTTCCGCTTGAA...CTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CAA 90 bp TTAAACCTCCTCATTTGGTTAAATAGCCAGTGTATACCAGAGAGTTCTACACAGAGGAATATGTATCATTaGATTTTGAGCATGTGGGGT +
Preference number: 5 (lower is better)
Translates to: LNLLIWLNSQCIPESSTQRNMYH*ILSMWG
Trigger: ACCCCACATGCTCAAAATCAAATGATACATATTCCT...CTGTGTAGAACTCTCTGGTATACACTGGCTATTTAACCAAATGAGGAGGTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR CAA 90 bp TGCATGGCACCACATTTATTTTCAGGAGTAGATGTTACATGGCAGGTATCAAAAATTGCTGCTGCCATGTaGCATTTTCCTGATTTTATT +
Preference number: 5 (lower is better)
Translates to: CMAPHLFSGVDVTWQVSKIAAAM*HFPDFI
Trigger: AATAAAATCAGGAAAATGCAACATGGCAGCAGCAAT...TTTTGATACCTGCCATGTAACATCTACTCCTGAAAATAAATGTGGTGCCATGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000321147.10
ENST00000341861.9
CDS TCA 90 bp GACTTCATCAACTTGGATCCTTCCTTCAGCATCAATCATTATTTCTaGCATCTTAAAAGTGACTTTAGGATTTGCTGTACCTGTTTTAGG +
Preference number: 5 (lower is better)
Translates to: DFINLDPSFSINHYF*HLKSDFRICCTCFR
Trigger: CCTAAAACAGGTACAGCAAATCCTAAAGTCACTTTTAAGATGTCAGAAATAATGATTGATGCTGAAGGAAGGATCCAAGTTGATGAAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558559.1
CDS-3UTR CAA 90 bp GTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTCTGTAAATGTTCCACTTCCTaGGTGATAATCGTAAGAAGC +
Preference number: 5 (lower is better)
Translates to: VDVTWQVSKCDDQFCVFCKCSTS*VIIVRS
Trigger: GCTTCTTACGATTATCACCAAGGAAGTGGAACATTT...ACAGAAAACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CAA 90 bp GTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTCTGTTTCCTCTTCGTGACTTaGGGGAAAAACATGAAAGAT +
Preference number: 5 (lower is better)
Translates to: VDVTWQVSKCDDQFCVFCFLFVT*GKNMKD
Trigger: ATCTTTCATGTTTTTCCCCAAAGTCACGAAGAGGAA...ACAGAAAACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CAA 90 bp TCAGGAGTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTCAAAATTCCTTTGTTTaGCAAGTTGGGTCATCTTCA +
Preference number: 5 (lower is better)
Translates to: SGVDVTWQVSKCDDQFCVQNSFV*QVGSSS
Trigger: TGAAGATGACCCAACTTGCAAAACAAAGGAATTTTG...AACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTACTCCTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR CAA 90 bp TCAGGAGTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTCAAGCGGAAATACTaGACTCCTTTAAACCGATTA +
Preference number: 5 (lower is better)
Translates to: SGVDVTWQVSKCDDQFCVFKRKY*TPLNRL
Trigger: TAATCGGTTTAAAGGAGTCAAGTATTTCCGCTTGAA...AACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTACTCCTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000395652.7
ENST00000559233.5
CDS-3UTR CAA 90 bp TCAGGAGTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTAGGAATATGTATCATTaGATTTTGAGCATGTGGGGT +
Preference number: 5 (lower is better)
Translates to: SGVDVTWQVSKCDDQFCVRNMYH*ILSMWG
Trigger: ACCCCACATGCTCAAAATCAAATGATACATATTCCT...AACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTACTCCTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000558786.5
CDS-3UTR CAA 90 bp GACACACTCACCTTATATAGTTTAGAAATGGCCATGTCTCTTTTCTTACATCAAGTAATTCTTATGGTATaGCTGGGTCTCTCAGGAATA +
Preference number: 5 (lower is better)
Translates to: DTLTLYSLEMAMSLFLHQVILMV*LGLSGI
Trigger: TATTCCTGAGAGACCCAGCAATACCATAAGAATTAC...TTGATGTAAGAAAAGAGACATGGCCATTTCTAAACTATATAAGGTGAGTGTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS-3UTR CAA 90 bp GTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTCTGTCAAAATTCCTTTGTTTaGCAAGTTGGGTCATCTTCA +
Preference number: 5 (lower is better)
Translates to: VDVTWQVSKCDDQFCVFCQNSFV*QVGSSS
Trigger: TGAAGATGACCCAACTTGCAAAACAAAGGAATTTTG...ACAGAAAACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558786.5
ENST00000559233.5
CDS-3UTR CAA 90 bp GTAGATGTTACATGGCAGGTATCAAAATGTGATGATCAATTCTGTGTTTTCTGTTCAGCAGCATCTTTATaGCAACAAAGAACCTGTAAT +
Preference number: 5 (lower is better)
Translates to: VDVTWQVSKCDDQFCVFCSAASL*QQRTCN
Trigger: ATTACAGGTTCTTTGTTGCAATAAAGATGCTGCTGA...ACAGAAAACACAGAATTGATCATCACATTTTGATACCTGCCATGTAACATCTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300141.11
ENST00000341861.9
CDS GCA 72 bp GCCCGGACCGTCCCGACGTGCGCTATGGAGCGGGCCTaGGCCGCTTCATGCTGCGCCGCCTCCACTCCGGTC +
Preference number: 6 (lower is better)
Translates to: ARTVPTCAMERA*AASCCAASTPV
Trigger: GACCGGAGTGGAGGCGGCGCAGCATGAAGCGGCGCAGGCCCGCTCCATAGCGCACGTCGGGACGGTCCGGGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000358939.8
ENST00000559526.5
ENST00000560194.1
ENST00000560665.1
CDS GCA 72 bp CCGACGTGCGCTATGGAGCGGGCCTGCGCCGCTTCATaGTGCGCCGCCTCCACTCCGGTCCTGGTTGCAGTG +
Preference number: 6 (lower is better)
Translates to: PTCAMERACAAS*CAASTPVLVAV
Trigger: CACTGCAACCAGGACCGGAGTGGAGGCGGCGCAGCATGAAGCGGCGCAGGCCCGCTCCATAGCGCACGTCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000358939.8
ENST00000559526.5
ENST00000560194.1
ENST00000560665.1
CDS GCA 72 bp ACGTGCGCTATGGAGCGGGCCTGCGCCGCTTCATGCTaGGCCGCCTCCACTCCGGTCCTGGTTGCAGTGGCT +
Preference number: 6 (lower is better)
Translates to: TCAMERACAASC*AASTPVLVAVA
Trigger: AGCCACTGCAACCAGGACCGGAGTGGAGGCGGCGCAGCATGAAGCGGCGCAGGCCCGCTCCATAGCGCACGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000358939.8
ENST00000559526.5
ENST00000560194.1
ENST00000560665.1
CDS TCA 72 bp GCATTTTCCCTGAGAACGCGCCGAGCAGTCCCTCCGTaGGGCGGAAAGGGCCTGGTGAGCCGTGGCCCAGGC +
Preference number: 6 (lower is better)
Translates to: AFSLRTRRAVPP*GGKGLVSRGPG
Trigger: GCCTGGGCCACGGCTCACCAGGCCCTTTCCGCCTCACGGAGGGACTGCTCGGCGCGTTCTCAGGGAAAATGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560665.1
CDS TCA 72 bp CAGGAGGCCAGCGCCCAGAGCTCAAGGGGCGCCCAGTaGACGGTGGTTGACTCGGAATCTCAGAGCCTCGGC +
Preference number: 6 (lower is better)
Translates to: QEASAQSSRGAQ*TVVDSESQSLG
Trigger: GCCGAGGCTCTGAGATTCCGAGTCAACCACCGTTCACTGGGCGCCCCTTGAGCTCTGGGCGCTGGCCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560436.1
CDS CAA 90 bp AGGAGGCCAGCGCCCAGAGCTCAAGGGGCGCCCAGTGAACGGTGGTaGACTCGGAATCTCAGAGCCTCGGCTTCCTCTTCCGGCAAGTGG +
Preference number: 6 (lower is better)
Translates to: RRPAPRAQGAPSERW*TRNLRASASSSGKW
Trigger: CCACTTGCCGGAAGAGGAAGCCGAGGCTCTGAGATTCCGAGTCAACCACCGTTCACTGGGCGCCCCTTGAGCTCTGGGCGCTGGCCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560436.1
CDS TCA 72 bp CGCCCAGAGCTCAAGGGGCGCCCAGTGAACGGTGGTTaGCTCGGAATCTCAGAGCCTCGGCTTCCTCTTCCG +
Preference number: 6 (lower is better)
Translates to: RPELKGRPVNGG*LGISEPRLPLP
Trigger: CGGAAGAGGAAGCCGAGGCTCTGAGATTCCGAGTCAACCACCGTTCACTGGGCGCCCCTTGAGCTCTGGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560436.1
CDS CCA 72 bp CCAGCGCCCAGAGCTCAAGGGGCGCCCAGTGAACGGTaGTTGACTCGGAATCTCAGAGCCTCGGCTTCCTCT +
Preference number: 6 (lower is better)
Translates to: PAPRAQGAPSER*LTRNLRASASS
Trigger: AGAGGAAGCCGAGGCTCTGAGATTCCGAGTCAACCACCGTTCACTGGGCGCCCCTTGAGCTCTGGGCGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560436.1
CDS CAA 72 bp GCGCCCAGAGCTCAAGGGGCGCCCAGTGAACGGTGGTaGACTCGGAATCTCAGAGCCTCGGCTTCCTCTTCC +
Preference number: 6 (lower is better)
Translates to: APRAQGAPSERW*TRNLRASASSS
Trigger: GGAAGAGGAAGCCGAGGCTCTGAGATTCCGAGTCAACCACCGTTCACTGGGCGCCCCTTGAGCTCTGGGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560436.1
CDS CCA 72 bp CTCACAGGAATCTTTCCTTTCCTCACCATCAAAGCGTaGAAGCCAGGAGGCCAGCGCCCAGAGCTCAAGGGG +
Preference number: 6 (lower is better)
Translates to: LTGIFPFLTIKA*KPGGQRPELKG
Trigger: CCCCTTGAGCTCTGGGCGCTGGCCTCCTGGCTTCCACGCTTTGATGGTGAGGAAAGGAAAGATTCCTGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560436.1
CDS TCA 72 bp AAAGAAGTCACAGTGCTGACTGATGCAGCAAGAATGTaGGTAGCCACGGTCAGTCAGCCTTGTCACCTCTCC +
Preference number: 6 (lower is better)
Translates to: KEVTVLTDAARM*VATVSQPCHLS
Trigger: GGAGAGGTGACAAGGCTGACTGACCGTGGCTACTCACATTCTTGCTGCATCAGTCAGCACTGTGACTTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558363.1
ENST00000558559.1
ENST00000558786.5
ENST00000559233.5
CDS GCA 72 bp TATCTCAACACCCAGCTGTTCTGTTTCCATTGCTGCTaGCATGTTGCATTTTCCCTGAGAACGCGCCGAGCA +
Preference number: 6 (lower is better)
Translates to: YLNTQLFCFHCC*HVAFSLRTRRA
Trigger: TGCTCGGCGCGTTCTCAGGGAAAATGCAACATGGCAGCAGCAATGGAAACAGAACAGCTGGGTGTTGAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560665.1
CDS CCA 72 bp CGTGTATCCTGTATCATAGAAGATCCACAGAGTGACTaGGGCCCCAGCAATAGCAACCTGAGGACCACCATA +
Preference number: 6 (lower is better)
Translates to: RVSCIIEDPQSD*GPSNSNLRTTI
Trigger: TATGGTGGTCCTCAGGTTGCTATTGCTGGGGCCCCAGTCACTCTGTGGATCTTCTATGATACAGGATACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358939.8
CDS CAA 90 bp AGTCCGCAGTTTCAAATATCTCAACACCCAGCTGTTCTGTTTCCATaGCTGCTGCCATGTTGCATTTTCCCTGAGAACGCGCCGAGCAGT +
Preference number: 6 (lower is better)
Translates to: SPQFQISQHPAVLFP*LLPCCIFPENAPSS
Trigger: ACTGCTCGGCGCGTTCTCAGGGAAAATGCAACATGGCAGCAGCAATGGAAACAGAACAGCTGGGTGTTGAGATATTTGAAACTGCGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560665.1
CDS TCA 72 bp CAGTCAGCCTTGTCACCTCTCCAGGATTTACGTAACTaGCTACGTACAGGTGATGCTCTAAAGGGGAGTCTT +
Preference number: 6 (lower is better)
Translates to: QSALSPLQDLRN*LRTGDALKGSL
Trigger: AAGACTCCCCTTTAGAGCATCACCTGTACGTAGTCAGTTACGTAAATCCTGGAGAGGTGACAAGGCTGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558559.1
ENST00000558786.5
ENST00000559233.5
CDS CAA 90 bp ATCCAGTCTGGATCAGCAGGGCATAATTTTGGATCCATCCGTATGTaGGGACAACTAGTTTCCACTAGATTGGGCCTTAAAGGTTGTTGC +
Preference number: 6 (lower is better)
Translates to: IQSGSAGHNFGSIRM*GQLVSTRLGLKGCC
Trigger: GCAACAACCTTTAAGGCCCAATCTAGTGGAAACTAGTTGTCCCAACATACGGATGGATCCAAAATTATGCCCTGCTGATCCAGACTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
ENST00000559526.5
CDS CCA 72 bp AGGAAAAACAGCGAGGTTATGCCAGCACAGCAACAATaGACTAAGATGTCAAGACACCTCATAGCACTAAGC +
Preference number: 6 (lower is better)
Translates to: RKNSEVMPAQQQ*TKMSRHLIALS
Trigger: GCTTAGTGCTATGAGGTGTCTTGACATCTTAGTCCATTGTTGCTGTGCTGGCATAACCTCGCTGTTTTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341861.9
CDS CAA 72 bp TCCATCCGTATGTTGGGACAACTAGTTTCCACTAGATaGGGCCTTAAAGGTTGTTGCGTAAATCCTTGTGGC +
Preference number: 6 (lower is better)
Translates to: SIRMLGQLVSTR*GLKGCCVNPCG
Trigger: GCCACAAGGATTTACGCAACAACCTTTAAGGCCCAATCTAGTGGAAACTAGTTGTCCCAACATACGGATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558529.1
ENST00000559233.5
CDS CAA 72 bp TTTCAAATATCTCAACACCCAGCTGTTCTGTTTCCATaGCTGCTGCCATGTTGCATTTTCCCTGAGAACGCG +
Preference number: 6 (lower is better)
Translates to: FQISQHPAVLFP*LLPCCIFPENA
Trigger: CGCGTTCTCAGGGAAAATGCAACATGGCAGCAGCAATGGAAACAGAACAGCTGGGTGTTGAGATATTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560665.1
CDS CAA 90 bp AATATCTCAACACCCAGCTGTTCTGTTTCCATTGCTGCTGCCATGTaGCATTTTCCTAGAAAAACAAGGCACATGAAGCTGTTCACGGGT +
Preference number: 6 (lower is better)
Translates to: NISTPSCSVSIAAAM*HFPRKTRHMKLFTG
Trigger: ACCCGTGAACAGCTTCATGTGCCTTGTTTTTCTAGGAAAATGCAACATGGCAGCAGCAATGGAAACAGAACAGCTGGGTGTTGAGATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558529.1
CDS GCA 72 bp GGCGTCACAGAATCAGGCACTGACTCAATGAGTCTCTaGCTTTCCATAACATCATCTTCTACTGGGATAAAT +
Preference number: 6 (lower is better)
Translates to: GVTESGTDSMSL*LSITSSSTGIN
Trigger: ATTTATCCCAGTAGAAGATGATGTTATGGAAAGGCAGAGACTCATTGAGTCAGTGCCTGATTCTGTGACGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS CCA 72 bp AATTCAGGTGAGATCAACACTATCTGTAGGCGAGTCTaGGAGCGATCTAGTAGGATGGACCAAGCATATTTT +
Preference number: 6 (lower is better)
Translates to: NSGEINTICRRV*ERSSRMDQAYF
Trigger: AAAATATGCTTGGTCCATCCTACTAGATCGCTCCCAGACTCGCCTACAGATAGTGTTGATCTCACCTGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS CAA 72 bp TCCACTACCGGCTTGAAACAGAAATGTTCCACTTCCTaGGTGATAATCGTAAGAAGCAATTCCGACTGTTCC +
Preference number: 6 (lower is better)
Translates to: STTGLKQKCSTS*VIIVRSNSDCS
Trigger: GGAACAGTCGGAATTGCTTCTTACGATTATCACCAAGGAAGTGGAACATTTCTGTTTCAAGCCGGTAGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558529.1
ENST00000559233.5
CDS CAA 72 bp GGATCAGCAGGGCATAATTTTGGATCCATCCGTATGTaGGGACAACTAGTTTCCACTAGATTGGGCCTTAAA +
Preference number: 6 (lower is better)
Translates to: GSAGHNFGSIRM*GQLVSTRLGLK
Trigger: TTTAAGGCCCAATCTAGTGGAAACTAGTTGTCCCAACATACGGATGGATCCAAAATTATGCCCTGCTGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558529.1
ENST00000559233.5
ENST00000559526.5
CDS CAA 72 bp TACTTCTTTAAAGTCCTAATTCCTACCACCACCACCTaGTCTATATTACTAGGCCTGCCAGTGCACGCAATC +
Preference number: 6 (lower is better)
Translates to: YFFKVLIPTTTT*SILLGLPVHAI
Trigger: GATTGCGTGCACTGGCAGGCCTAGTAATATAGACAAGGTGGTGGTGGTAGGAATTAGGACTTTAAAGAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560597.1
CDS CAA 90 bp TCCTTGTGGCCCTCCATCTTTTACGTGATAAATTCCACTACCGGCTaGAAACAGAAATGTTCCACTTCCTTGGTGATAATCGTAAGAAGC +
Preference number: 6 (lower is better)
Translates to: SLWPSIFYVINSTTG*KQKCSTSLVIIVRS
Trigger: GCTTCTTACGATTATCACCAAGGAAGTGGAACATTTCTGTTTCAAGCCGGTAGTGGAATTTATCACGTAAAAGATGGAGGGCCACAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558529.1
ENST00000559233.5
CDS CAA 90 bp TGGCCCAAAATTCCTTTGTTTTGCAAGTTGGGTCATCTTCAGGACTaGATAGCTTGTAAAGGGACACACAGTGTGGATTCTTCTGGTTAC +
Preference number: 6 (lower is better)
Translates to: WPKIPLFCKLGHLQD*IACKGTHSVDSSGY
Trigger: GTAACCAGAAGAATCCACACTGTGTGTCCCTTTACAAGCTATCAAGTCCTGAAGATGACCCAACTTGCAAAACAAAGGAATTTTGGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558363.1
ENST00000558559.1
ENST00000558786.5
ENST00000559233.5
CDS TCA 72 bp GTTCTCACCAGACATGGCAAGGTAATAGATTCTGTCTaGATGAGGTCCATCTGGATCATTCCTCTTCACAAA +
Preference number: 6 (lower is better)
Translates to: VLTRHGKVIDSV*MRSIWIIPLHK
Trigger: TTTGTGAAGAGGAATGATCCAGATGGACCTCATTCAGACAGAATCTATTACCTTGCCATGTCTGGTGAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558529.1
ENST00000559233.5
ENST00000559526.5
ENST00000560436.1
CDS CAA 72 bp GCTGAATCCAAAATGGTGGCCCAAAATTCCTTTGTTTaGCAAGTTGGGTCATCTTCAGGACTTGATAGCTTG +
Preference number: 6 (lower is better)
Translates to: AESKMVAQNSFV*QVGSSSGLDSL
Trigger: CAAGCTATCAAGTCCTGAAGATGACCCAACTTGCAAAACAAAGGAATTTTGGGCCACCATTTTGGATTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558363.1
ENST00000558559.1
ENST00000558786.5
ENST00000559233.5
CDS TCA 72 bp CTCAACATAAAAAGGCTCCAATTTAGGCCGATCCTGTaGTTCAATATTCTCCTCACAGTCCGCAGTTTCAAA +
Preference number: 6 (lower is better)
Translates to: LNIKRLQFRPIL*FNILLTVRSFK
Trigger: TTTGAAACTGCGGACTGTGAGGAGAATATTGAATCACAGGATCGGCCTAAATTGGAGCCTTTTTATGTTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558529.1
ENST00000559233.5
ENST00000559526.5
ENST00000560194.1
ENST00000560436.1
ENST00000560665.1
CDS CAA 90 bp GTGATAAATTCCACTACCGGCTTGAAACAGAAATGTTCCACTTCCTaGGTGATAATCGTAAGAAGCAATTCCGACTGTTCCAATGCGTTT +
Preference number: 6 (lower is better)
Translates to: VINSTTGLKQKCSTS*VIIVRSNSDCSNAF
Trigger: AAACGCATTGGAACAGTCGGAATTGCTTCTTACGATTATCACCAAGGAAGTGGAACATTTCTGTTTCAAGCCGGTAGTGGAATTTATCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000558529.1
ENST00000559233.5
CDS TCA 72 bp CTGCCATGTTGCATTTTCCTAGAAAAACAAGGCACATaGAGCTGTTCACGGGTCTATCTTCTATTATCAGAA +
Preference number: 6 (lower is better)
Translates to: LPCCIFLEKQGT*SCSRVYLLLSE
Trigger: TTCTGATAATAGAAGATAGACCCGTGAACAGCTTCATGTGCCTTGTTTTTCTAGGAAAATGCAACATGGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558529.1
CDS CAA 90 bp AGTCTCCTTTCTTCTCTGGTTACGATGTTAGATATCCAAATATCGTaGCTATGTATAAAAGCAATCCAGTCTGGATCAGCAGGGCATAAT +
Preference number: 6 (lower is better)
Translates to: SLLSSLVTMLDIQIS*LCIKAIQSGSAGHN
Trigger: ATTATGCCCTGCTGATCCAGACTGGATTGCTTTTATACATAGCAACGATATTTGGATATCTAACATCGTAACCAGAGAAGAAAGGAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS CAA 72 bp TCTTCTCTGGTTACGATGTTAGATATCCAAATATCGTaGCTATGTATAAAAGCAATCCAGTCTGGATCAGCA +
Preference number: 6 (lower is better)
Translates to: SSLVTMLDIQIS*LCIKAIQSGSA
Trigger: TGCTGATCCAGACTGGATTGCTTTTATACATAGCAACGATATTTGGATATCTAACATCGTAACCAGAGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5
CDS CAA 72 bp TTTCAAATATCTCAACACCCAGCTGTTCTGTTTCCATaGCTGCTGCCATGTTGCATTTTCCTGATTTTATTT +
Preference number: 6 (lower is better)
Translates to: FQISQHPAVLFP*LLPCCIFLILF
Trigger: AAATAAAATCAGGAAAATGCAACATGGCAGCAGCAATGGAAACAGAACAGCTGGGTGTTGAGATATTTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321147.10
ENST00000341861.9
ENST00000395652.7
ENST00000559233.5
ENST00000560436.1
CDS TCA 72 bp AACTTGGATCCTTCCTTCAGCATCAATCATTATTTCTaGCATCTTAAAAGTGACTTTAGGATTTGCTGTACC +
Preference number: 6 (lower is better)
Translates to: NLDPSFSINHYF*HLKSDFRICCT
Trigger: GGTACAGCAAATCCTAAAGTCACTTTTAAGATGTCAGAAATAATGATTGATGCTGAAGGAAGGATCCAAGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558559.1
CDS TCA 72 bp ATCTATGATCCTTCCTTCAGCATCAATCATTATTTCTaGCATCTTAAAAGTGACTTTAGGATTTGCTGTACC +
Preference number: 6 (lower is better)
Translates to: IYDPSFSINHYF*HLKSDFRICCT
Trigger: GGTACAGCAAATCCTAAAGTCACTTTTAAGATGTCAGAAATAATGATTGATGCTGAAGGAAGGATCATAGAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300141.11
ENST00000321147.10
ENST00000341861.9
ENST00000358939.8
ENST00000395652.7
ENST00000559233.5