RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DPP6 (Homo sapiens)

Ensembl gene IDs: ENSG00000130226

Ensembl transcript IDs: ENST00000332007.7, ENST00000377770.8, ENST00000404039.5, ENST00000406326.5, ENST00000427557.1, ENST00000462622.5, ENST00000471100.5, ENST00000478614.1, ENST00000479637.1, ENST00000480367.1, ENST00000481593.1, ENST00000484789.5, ENST00000488512.5, ENST00000493268.1, ENST00000496611.1, ENST00000619756.4

Found 892 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGGGGCCGTGGCGTGCCGGTCTCTCGGGCGCCGGGAGGAGGCGCTaGTGCGGGGACAGCGTTGTCCCTGGTGCCATGGAGGCCGTGAGT +
Preference number: 1 (lower is better)
Translates to: EGPWRAGLSGAGRRR*CGDSVVPGAMEAVS
Trigger: ACTCACGGCCTCCATGGCACCAGGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGCGCCCGAGAGACCGGCACGCCACGGCCCCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR CCA 90 bp GCCTGCGGCCACCATCCTTTGCTCTGTTCCTTGGGGGAGGGGCCGTaGCGTGCCGGTCTCTCGGGCGCCGGGAGGAGGCGCTGCTGCGGG +
Preference number: 1 (lower is better)
Translates to: ACGHHPLLCSLGEGP*RAGLSGAGRRRCCG
Trigger: CCCGCAGCAGCGCCTCCTCCCGGCGCCCGAGAGACCGGCACGCCACGGCCCCTCCCCCAAGGAACAGAGCAAAGGATGGTGGCCGCAGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR GCA 90 bp TCGTGGCAGGAAGGTCACGGAGCCACCCCCACGATGGGAGAGGGATaGGCGCAGGCCCACAGAACCCTCAGGACTCCCGTGGCCCGAGCA +
Preference number: 1 (lower is better)
Translates to: SWQEGHGATPTMGEG*AQAHRTLRTPVARA
Trigger: TGCTCGGGCCACGGGAGTCCTGAGGGTTCTGTGGGCCTGCGCGCATCCCTCTCCCATCGTGGGGGTGGCTCCGTGACCTTCCTGCCACGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
3UTR CCA 90 bp CAACCTCCTGCTCGTGGCAGGAAGGTCACGGAGCCACCCCCACGATaGGAGAGGGATGCGCGCAGGCCCACAGAACCCTCAGGACTCCCG +
Preference number: 1 (lower is better)
Translates to: QPPARGRKVTEPPPR*ERDARRPTEPSGLP
Trigger: CGGGAGTCCTGAGGGTTCTGTGGGCCTGCGCGCATCCCTCTCCCATCGTGGGGGTGGCTCCGTGACCTTCCTGCCACGAGCAGGAGGTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
3UTR CCA 90 bp ACACAGAGGCTAGTGTGGGCGGGTCTCATGCTTCCGCTTGGTGGCTaGAATCTAGGGGCCGGTGTCCTGTGGGCTCGCGTGGGGCCTGCG +
Preference number: 1 (lower is better)
Translates to: TQRLVWAGLMLPLGG*NLGAGVLWARVGPA
Trigger: CGCAGGCCCCACGCGAGCCCACAGGACACCGGCCCCTAGATTCCAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGCCTCTGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR CCA 90 bp GGGAACACAGAGGCTAGTGTGGGCGGGTCTCATGCTTCCGCTTGGTaGCTGGAATCTAGGGGCCGGTGTCCTGTGGGCTCGCGTGGGGCC +
Preference number: 1 (lower is better)
Translates to: GNTEASVGGSHASAW*LESRGRCPVGSRGA
Trigger: GGCCCCACGCGAGCCCACAGGACACCGGCCCCTAGATTCCAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGCCTCTGTGTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR CCA 90 bp AACGGGAACACAGAGGCTAGTGTGGGCGGGTCTCATGCTTCCGCTTaGTGGCTGGAATCTAGGGGCCGGTGTCCTGTGGGCTCGCGTGGG +
Preference number: 1 (lower is better)
Translates to: NGNTEASVGGSHASA*WLESRGRCPVGSRG
Trigger: CCCACGCGAGCCCACAGGACACCGGCCCCTAGATTCCAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGCCTCTGTGTTCCCGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR GCA 90 bp CAAACGCCAAAATGCAACAGGGACGCATCTCCTCTGCTGATGGGATaGCAAGGACACCCCCGCAGGGCTGGGAGCTGGCGAAGTCAGTCC +
Preference number: 1 (lower is better)
Translates to: QTPKCNRDASPLLMG*QGHPRRAGSWRSQS
Trigger: GGACTGACTTCGCCAGCTCCCAGCCCTGCGGGGGTGTCCTTGGCATCCCATCAGCAGAGGAGATGCGTCCCTGTTGCATTTTGGCGTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
3UTR CCA 90 bp CGCATCTCCTCTGCTGATGGGATGCCAAGGACACCCCCGCAGGGCTaGGAGCTGGCGAAGTCAGTCCTGACATTCAGCTTGTCCACAAGC +
Preference number: 1 (lower is better)
Translates to: RISSADGMPRTPPQG*ELAKSVLTFSLSTS
Trigger: GCTTGTGGACAAGCTGAATGTCAGGACTGACTTCGCCAGCTCCCAGCCCTGCGGGGGTGTCCTTGGCATCCCATCAGCAGAGGAGATGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
3UTR CCA 90 bp GTGAGACAGGGTGTGATGTCCCTAACGGGAACACAGAGGCTAGTGTaGGCGGGTCTCATGCTTCCGCTTGGTGGCTGGAATCTAGGGGCC +
Preference number: 1 (lower is better)
Translates to: VRQGVMSLTGTQRLV*AGLMLPLGGWNLGA
Trigger: GGCCCCTAGATTCCAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGCCTCTGTGTTCCCGTTAGGGACATCACACCCTGTCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR GCA 90 bp TTCAAACTAGCACTTCTAGAGTCCAGATCGGCCACAGTGTCAGCATaGAGGCTCAACACGGGGTTAGCACTGGCGGGAGGAGGCTGGGTT +
Preference number: 1 (lower is better)
Translates to: FKLALLESRSATVSA*RLNTGLALAGGGWV
Trigger: AACCCAGCCTCCTCCCGCCAGTGCTAACCCCGTGTTGAGCCTGCATGCTGACACTGTGGCCGATCTGGACTCTAGAAGTGCTAGTTTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
3UTR TCA 90 bp TGCCAAGGACACCCCCGCAGGGCTGGGAGCTGGCGAAGTCAGTCCTaGCATTCAGCTTGTCCACAAGCTCAAAAGGAAATGACAGTAATG +
Preference number: 1 (lower is better)
Translates to: CQGHPRRAGSWRSQS*HSACPQAQKEMTVM
Trigger: CATTACTGTCATTTCCTTTTGAGCTTGTGGACAAGCTGAATGTCAGGACTGACTTCGCCAGCTCCCAGCCCTGCGGGGGTGTCCTTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
3UTR GCA 90 bp CGTTCAGAGCTCATGTGGATAAACCCAAAGCCCCAAACGCCAAAATaGAACAGGGACGCATCTCCTCTGCTGATGGGATGCCAAGGACAC +
Preference number: 1 (lower is better)
Translates to: RSELMWINPKPQTPK*NRDASPLLMGCQGH
Trigger: GTGTCCTTGGCATCCCATCAGCAGAGGAGATGCGTCCCTGTTGCATTTTGGCGTTTGGGGCTTTGGGTTTATCCACATGAGCTCTGAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
3UTR GCA 90 bp AGACGTCTGAAGACAACCTTGAGGAGGGAGCAGTTACTTCCGATCTaGTTCTTCATCAAGCGCAAAGTCTACACGTGGACTGGAGAAAGG +
Preference number: 1 (lower is better)
Translates to: RRLKTTLRREQLLPI*FFIKRKVYTWTGER
Trigger: CCTTTCTCCAGTCCACGTGTAGACTTTGCGCTTGATGAAGAAGCAGATCGGAAGTAACTGCTCCCTCCTCAAGGTTGTCTTCAGACGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR CCA 90 bp AGACCTTCCAATCACCCTAACTATAACGGACGTTCAGAGCTCATGTaGATAAACCCAAAGCCCCAAACGCCAAAATGCAACAGGGACGCA +
Preference number: 1 (lower is better)
Translates to: RPSNHPNYNGRSELM*INPKPQTPKCNRDA
Trigger: TGCGTCCCTGTTGCATTTTGGCGTTTGGGGCTTTGGGTTTATCCACATGAGCTCTGAACGTCCGTTATAGTTAGGGTGATTGGAAGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
3UTR TCA 90 bp GATCGGTCCTGTTTATCAGCACGTTGGTCCTTTCACAAATGGTGGTaGATCACCTTTAAAACACCCAGTGATGGAGACCTTCCAATCACC +
Preference number: 1 (lower is better)
Translates to: DRSCLSARWSFHKWW*ITFKTPSDGDLPIT
Trigger: GGTGATTGGAAGGTCTCCATCACTGGGTGTTTTAAAGGTGATTCACCACCATTTGTGAAAGGACCAACGTGCTGATAAACAGGACCGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
3UTR TCA 90 bp AATGTAATTGGAGGCTCCTGGAGACCTCAAGTGTATATGATATTCTaGAGAAGACACAGTCGGCCAACATCACATTGTCACTCAGAGGAA +
Preference number: 1 (lower is better)
Translates to: NVIGGSWRPQVYMIF*RRHSRPTSHCHSEE
Trigger: TTCCTCTGAGTGACAATGTGATGTTGGCCGACTGTGTCTTCTTCAGAATATCATATACACTTGAGGTCTCCAGGAGCCTCCAATTACATT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
3UTR GCA 90 bp TTCCTTTATATACAAGAGAATGAAATATACACTGGGAACACCGGCTaGACATTTGGTGGGGGTGTATCTTACAAGGCTAACGTAGCACAT +
Preference number: 1 (lower is better)
Translates to: FLYIQENEIYTGNTG*TFGGGVSYKANVAH
Trigger: ATGTGCTACGTTAGCCTTGTAAGATACACCCCCACCAAATGTGCAGCCGGTGTTCCCAGTGTATATTTCATTCTCTTGTATATAAAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR TCA 90 bp CTTCCGCTTGGTGGCTGGAATCTAGGGGCCGGTGTCCTGTGGGCTCGCGTGGGGGTGCCATGGAGGCCGTaGGTGATGACCCCGGGGAAG +
Preference number: 2 (lower is better)
Translates to: LPLGGWNLGAGVLWARVGVPWRP*VMTPGK
Trigger: CTTCCCCGGGGTCATCACTCACGGCCTCCATGGCAC...CCCCACGCGAGCCCACAGGACACCGGCCCCTAGATTCCAGCCACCAAGCGGAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR GCA 90 bp GCTAGTGTGGGCGGGTCTCATGCTTCCGCTTGGTGGCTGGAATCTAGGGGCCGGGGCTCGCGTGGGGCCTaGGGCCACCATCCTTTGCTC +
Preference number: 2 (lower is better)
Translates to: ASVGGSHASAWWLESRGRGSRGA*GHHPLL
Trigger: GAGCAAAGGATGGTGGCCGCAGGCCCCACGCGAGCC...CCGGCCCCTAGATTCCAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR CCA 90 bp AGAGGGATGCGCGCAGGCCCACAGAACCCTCAGGACTCCCGTGGCCCGAGCACAGAGACACACATGCTATaGAACACCCGGCCCCGCCCC +
Preference number: 2 (lower is better)
Translates to: RGMRAGPQNPQDSRGPSTETHML*NTRPRP
Trigger: GGGGCGGGGCCGGGTGTTCCATAGCATGTGTGTCTC...TGTGCTCGGGCCACGGGAGTCCTGAGGGTTCTGTGGGCCTGCGCGCATCCCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR CCA 90 bp CTTCCGCTTGGTGGCTGGAATCTAGGGGCCGGTGTCCTGTGGGCTCGCGTGGGGGGACAGCGTTGTCCCTaGTGCCATGGAGGCCGTGAG +
Preference number: 2 (lower is better)
Translates to: LPLGGWNLGAGVLWARVGGQRCP*CHGGRE
Trigger: CTCACGGCCTCCATGGCACCAGGGACAACGCTGTCC...CCCCACGCGAGCCCACAGGACACCGGCCCCTAGATTCCAGCCACCAAGCGGAAG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR CCA 90 bp AGAGGGATGCGCGCAGGCCCACAGAACCCTCAGGACTCCCGTGGCCCGAGCACACTTTGCTCTGTTCCTTaGGGGAGGGGCCGTGGCGTG +
Preference number: 2 (lower is better)
Translates to: RGMRAGPQNPQDSRGPSTLCSVP*GRGRGV
Trigger: CACGCCACGGCCCCTCCCCCAAGGAACAGAGCAAAG...TGTGCTCGGGCCACGGGAGTCCTGAGGGTTCTGTGGGCCTGCGCGCATCCCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR GCA 90 bp AGAGGGATGCGCGCAGGCCCACAGAACCCTCAGGACTCCCGTGGCCCGAGCACATGTGGGCGGGTCTCATaGTTCCGCTTGGTGGCTGGA +
Preference number: 2 (lower is better)
Translates to: RGMRAGPQNPQDSRGPSTCGRVS*FRLVAG
Trigger: TCCAGCCACCAAGCGGAAGCATGAGACCCGCCCACA...TGTGCTCGGGCCACGGGAGTCCTGAGGGTTCTGTGGGCCTGCGCGCATCCCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR CCA 90 bp AGGACACCCCCGCAGGGCTGGGAGCTGGCGAAGTCAGTCCTGACATTCAGCTTGCTTTGCTCTGTTCCTTaGGGGAGGGGCCGTGGCGTG +
Preference number: 2 (lower is better)
Translates to: RTPPQGWELAKSVLTFSLLCSVP*GRGRGV
Trigger: CACGCCACGGCCCCTCCCCCAAGGAACAGAGCAAAG...CAAGCTGAATGTCAGGACTGACTTCGCCAGCTCCCAGCCCTGCGGGGGTGTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR CCA 90 bp AACACAGAGGCTAGTGTGGGCGGGTCTCATGCTTCCGCTTGGTGGCTGGAATCTTCCTGTGGGCTCGCGTaGGGCCTGCGGCCACCATCC +
Preference number: 2 (lower is better)
Translates to: NTEASVGGSHASAWWLESSCGLA*GLRPPS
Trigger: GGATGGTGGCCGCAGGCCCCACGCGAGCCCACAGGA...AGATTCCAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGCCTCTGTGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR CAA 90 bp GCCCCGCCCCTCCGAGGGAAGAGGGAGGGCAGGGAAATCCCTCGGTaGCATCTGGTTGTAGAAAGAGCCACGTTTGTGCTTAGAGCGACC +
Preference number: 2 (lower is better)
Translates to: APPLRGKREGREIPR*HLVVERATFVLRAT
Trigger: GGTCGCTCTAAGCACAAACGTGGCTCTTTCTACAACCAGATGCAACCGAGGGATTTCCCTGCCCTCCCTCTTCCCTCGGAGGGGCGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR TCA 90 bp AACACAGAGGCTAGTGTGGGCGGGTCTCATGCTTCCGCTTGGTGGCTGGAATCTGTGCCATGGAGGCCGTaGGTGATGACCCCGGGGAAG +
Preference number: 2 (lower is better)
Translates to: NTEASVGGSHASAWWLESVPWRP*VMTPGK
Trigger: CTTCCCCGGGGTCATCACTCACGGCCTCCATGGCAC...AGATTCCAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGCCTCTGTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR CCA 90 bp TCCCCAAGACGTCTGAAGACAACCTTGAGGAGGGAGCAGTTACTTCCGATCTGCTCCTGTGGGCTCGCGTaGGGCCTGCGGCCACCATCC +
Preference number: 2 (lower is better)
Translates to: SPRRLKTTLRREQLLPICSCGLA*GLRPPS
Trigger: GGATGGTGGCCGCAGGCCCCACGCGAGCCCACAGGA...GCAGATCGGAAGTAACTGCTCCCTCCTCAAGGTTGTCTTCAGACGTCTTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR CCA 90 bp GAGGGAGCAGTTACTTCCGATCTGCTTCTTCATCAAGCGCAAAGTCTACACGTGTTGGGGGAGGGGCCGTaGCGTGCCGGTCTCTCGGGC +
Preference number: 2 (lower is better)
Translates to: EGAVTSDLLLHQAQSLHVLGEGP*RAGLSG
Trigger: GCCCGAGAGACCGGCACGCCACGGCCCCTCCCCCAA...CACGTGTAGACTTTGCGCTTGATGAAGAAGCAGATCGGAAGTAACTGCTCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR GCA 90 bp AGGACACCCCCGCAGGGCTGGGAGCTGGCGAAGTCAGTCCTGACATTCAGCTTGACATCATCAACCTCCTaGTCGTGGCAGGAAGGTCAC +
Preference number: 2 (lower is better)
Translates to: RTPPQGWELAKSVLTFSLTSSTS*SWQEGH
Trigger: GTGACCTTCCTGCCACGAGCAGGAGGTTGATGATGT...CAAGCTGAATGTCAGGACTGACTTCGCCAGCTCCCAGCCCTGCGGGGGTGTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR CCA 90 bp AGTGCACACCTACAGCCAAGCCCTAGCATAGCTGAGTGGGAGAGAGGTTTTATTTCCTGTGGGCTCGCGTaGGGCCTGCGGCCACCATCC +
Preference number: 2 (lower is better)
Translates to: SAHLQPSPSIAEWERGFISCGLA*GLRPPS
Trigger: GGATGGTGGCCGCAGGCCCCACGCGAGCCCACAGGA...AATAAAACCTCTCTCCCACTCAGCTATGCTAGGGCTTGGCTGTAGGTGTGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR TCA 90 bp CACATCCCCACTTCCCTCCGACCAGATGTCGTGGCCAGAGCTGGCTTCCCCTTCTGGCGAAGTCAGTCCTaGCATTCAGCTTGTCCACAA +
Preference number: 2 (lower is better)
Translates to: HIPTSLRPDVVARAGFPFWRSQS*HSACPQ
Trigger: TTGTGGACAAGCTGAATGTCAGGACTGACTTCGCCA...GAAGGGGAAGCCAGCTCTGGCCACGACATCTGGTCGGAGGGAAGTGGGGATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR GCA 90 bp AGGGAGCAGTTACTTCCGATCTGCTTCTTCATCAAGCGCAAAGTCTACACGTGGGGCTCGCGTGGGGCCTaGGGCCACCATCCTTTGCTC +
Preference number: 2 (lower is better)
Translates to: REQLLPICFFIKRKVYTWGSRGA*GHHPLL
Trigger: GAGCAAAGGATGGTGGCCGCAGGCCCCACGCGAGCC...CCACGTGTAGACTTTGCGCTTGATGAAGAAGCAGATCGGAAGTAACTGCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR GCA 90 bp GGGGGTGTATCTTACAAGGCTAACGTAGCACATCATCAACCTCCTGCTCGTGGCACGATGGGAGAGGGATaGGCGCAGGCCCACAGAACC +
Preference number: 2 (lower is better)
Translates to: GGVSYKANVAHHQPPARGTMGEG*AQAHRT
Trigger: GGTTCTGTGGGCCTGCGCGCATCCCTCTCCCATCGT...GCCACGAGCAGGAGGTTGATGATGTGCTACGTTAGCCTTGTAAGATACACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR CCA 90 bp CCCCTCACCATGTTGAACGTCCTCATTACAGGAAGTAGCAAGCCCATATATGAATTGGGGGAGGGGCCGTaGCGTGCCGGTCTCTCGGGC +
Preference number: 2 (lower is better)
Translates to: PLTMLNVLITGSSKPIYELGEGP*RAGLSG
Trigger: GCCCGAGAGACCGGCACGCCACGGCCCCTCCCCCAA...TTCATATATGGGCTTGCTACTTCCTGTAATGAGGACGTTCAACATGGTGAGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR GCA 90 bp CCTCAGTGTTTAGGAACGTCCCCAAGACGTCTGAAGACAACCTTGAGGAGGGAGCTGCGTCCATGGCACTaGGACGTGAGACAGGGTGTG +
Preference number: 2 (lower is better)
Translates to: PQCLGTSPRRLKTTLRRELRPWH*DVRQGV
Trigger: CACACCCTGTCTCACGTCGCAGTGCCATGGACGCAG...CTCCCTCCTCAAGGTTGTCTTCAGACGTCTTGGGGACGTTCCTAAACACTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR CCA 90 bp GGTGTATCTTACAAGGCTAACGTAGCACATCATCAACCTCCTGCTCGTGGCAGGGGACAGCGTTGTCCCTaGTGCCATGGAGGCCGTGAG +
Preference number: 2 (lower is better)
Translates to: GVSYKANVAHHQPPARGRGQRCP*CHGGRE
Trigger: CTCACGGCCTCCATGGCACCAGGGACAACGCTGTCC...CCTGCCACGAGCAGGAGGTTGATGATGTGCTACGTTAGCCTTGTAAGATACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR GCA 90 bp GCGAAGTCAGTCCTGACATTCAGCTTGTCCACAAGCTCAAAAGGAAATGACAGTGGGAGGAGGCGCTGCTaGGGGGACAGCGTTGTCCCT +
Preference number: 2 (lower is better)
Translates to: AKSVLTFSLSTSSKGNDSGRRRC*GDSVVP
Trigger: AGGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCC...ACTGTCATTTCCTTTTGAGCTTGTGGACAAGCTGAATGTCAGGACTGACTTCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR CCA 90 bp AGGAGGGAGCAGTTACTTCCGATCTGCTTCTTCATCAAGCGCAAAGTCTACACGGAGACACACATGCTATaGAACACCCGGCCCCGCCCC +
Preference number: 2 (lower is better)
Translates to: RREQLLPICFFIKRKVYTETHML*NTRPRP
Trigger: GGGGCGGGGCCGGGTGTTCCATAGCATGTGTGTCTC...CGTGTAGACTTTGCGCTTGATGAAGAAGCAGATCGGAAGTAACTGCTCCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR CCA 90 bp GGATCGGTCCTGTTTATCAGCACGTTGGTCCTTTCACAAATGGTGGTGAATCACCTGGCGGGAGGAGGCTaGGTTGACTGCACAGAGGCC +
Preference number: 2 (lower is better)
Translates to: GSVLFISTLVLSQMVVNHLAGGG*VDCTEA
Trigger: GGCCTCTGTGCAGTCAACCCAGCCTCCTCCCGCCAG...GTGATTCACCACCATTTGTGAAAGGACCAACGTGCTGATAAACAGGACCGATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR CCA 90 bp TCTGAAGAAGACACAGTCGGCCAACATCACATTGTCACTCAGAGGAATCATGAGCCTCCCTCCCTCCTCTaGGACACTCTGCGGGCACCC +
Preference number: 2 (lower is better)
Translates to: SEEDTVGQHHIVTQRNHEPPSLL*DTLRAP
Trigger: GGGTGCCCGCAGAGTGTCCCAGAGGAGGGAGGGAGG...CTCATGATTCCTCTGAGTGACAATGTGATGTTGGCCGACTGTGTCTTCTTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
3UTR-3UTR GCA 90 bp AGGACACCCCCGCAGGGCTGGGAGCTGGCGAAGTCAGTCCTGACATTCAGCTTGCAGTTACTTCCGATCTaGTTCTTCATCAAGCGCAAA +
Preference number: 2 (lower is better)
Translates to: RTPPQGWELAKSVLTFSLQLLPI*FFIKRK
Trigger: TTTGCGCTTGATGAAGAAGCAGATCGGAAGTAACTG...CAAGCTGAATGTCAGGACTGACTTCGCCAGCTCCCAGCCCTGCGGGGGTGTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR CCA 90 bp GAGGGAGCAGTTACTTCCGATCTGCTTCTTCATCAAGCGCAAAGTCTACACGTGCTTCCGCTTGGTGGCTaGAATCTAGGGGCCGGTGTC +
Preference number: 2 (lower is better)
Translates to: EGAVTSDLLLHQAQSLHVLPLGG*NLGAGV
Trigger: GACACCGGCCCCTAGATTCCAGCCACCAAGCGGAAG...CACGTGTAGACTTTGCGCTTGATGAAGAAGCAGATCGGAAGTAACTGCTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR CCA 90 bp TTTAATGGGTGCTATTGGCTGTCTTCCCCCTCAGTGTTTAGGAACGTCCCCAAGCATGCTTCCGCTTGGTaGCTGGAATCTAGGGGCCGG +
Preference number: 2 (lower is better)
Translates to: FNGCYWLSSPSVFRNVPKHASAW*LESRGR
Trigger: CCGGCCCCTAGATTCCAGCCACCAAGCGGAAGCATG...CTTGGGGACGTTCCTAAACACTGAGGGGGAAGACAGCCAATAGCACCCATTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR CAA 90 bp CCCCCTCAGTGTTTAGGAACGTCCCCAAGACGTCTGAAGACAACCTaGAGGAGGGAGCAGTTACTTCCGATCTGCTTCTTCATCAAGCGC +
Preference number: 2 (lower is better)
Translates to: PPQCLGTSPRRLKTT*RREQLLPICFFIKR
Trigger: GCGCTTGATGAAGAAGCAGATCGGAAGTAACTGCTCCCTCCTCAAGGTTGTCTTCAGACGTCTTGGGGACGTTCCTAAACACTGAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR TCA 90 bp TCCCCAAGACGTCTGAAGACAACCTTGAGGAGGGAGCAGTTACTTCCGATCTGCAGCAAAACAACCCCATaGCGGAGACAGTGGAGCATC +
Preference number: 2 (lower is better)
Translates to: SPRRLKTTLRREQLLPICSKTTP*RRQWSI
Trigger: GATGCTCCACTGTCTCCGTCATGGGGTTGTTTTGCT...GCAGATCGGAAGTAACTGCTCCCTCCTCAAGGTTGTCTTCAGACGTCTTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR GCA 90 bp GGATCGGTCCTGTTTATCAGCACGTTGGTCCTTTCACAAATGGTGGTGAATCACGCGGCCACCATCCTTTaGTCTGTTCCTTGGGGGAGG +
Preference number: 2 (lower is better)
Translates to: GSVLFISTLVLSQMVVNHAATIL*SVPWGR
Trigger: CCTCCCCCAAGGAACAGAGCAAAGGATGGTGGCCGC...GTGATTCACCACCATTTGTGAAAGGACCAACGTGCTGATAAACAGGACCGATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR GCA 90 bp GCACTCGGATCGGTCCTGTTTATCAGCACGTTGGTCCTTTCACAAATGGTGGTGCAATGGTGCTGTAACTaGTGCGTCCATGGCACTGCG +
Preference number: 2 (lower is better)
Translates to: ALGSVLFISTLVLSQMVVQWCCN*CVHGTA
Trigger: CGCAGTGCCATGGACGCAGCAGTTACAGCACCATTG...CACCACCATTTGTGAAAGGACCAACGTGCTGATAAACAGGACCGATCCGAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR GCA 90 bp AATCACCCTAACTATAACGGACGTTCAGAGCTCATGTGGATAAACCCAAAGCCCCCTCTGCTGATGGGATaGCAAGGACACCCCCGCAGG +
Preference number: 2 (lower is better)
Translates to: NHPNYNGRSELMWINPKPPLLMG*QGHPRR
Trigger: CCTGCGGGGGTGTCCTTGGCATCCCATCAGCAGAGG...GGGCTTTGGGTTTATCCACATGAGCTCTGAACGTCCGTTATAGTTAGGGTGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR CCA 90 bp ATCTGCTTCTTCATCAAGCGCAAAGTCTACACGTGGACTGGAGAAAGGAAAGGGCATGCTTCCGCTTGGTaGCTGGAATCTAGGGGCCGG +
Preference number: 2 (lower is better)
Translates to: ICFFIKRKVYTWTGERKGHASAW*LESRGR
Trigger: CCGGCCCCTAGATTCCAGCCACCAAGCGGAAGCATG...CCCTTTCCTTTCTCCAGTCCACGTGTAGACTTTGCGCTTGATGAAGAAGCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR TCA 90 bp TCCCCAAGACGTCTGAAGACAACCTTGAGGAGGGAGCAGTTACTTCCGATCTGCAGCCCCTCACCATGTTaGACGTCCTCATTACAGGAA +
Preference number: 2 (lower is better)
Translates to: SPRRLKTTLRREQLLPICSPSPC*TSSLQE
Trigger: TTCCTGTAATGAGGACGTTCAACATGGTGAGGGGCT...GCAGATCGGAAGTAACTGCTCCCTCCTCAAGGTTGTCTTCAGACGTCTTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR CCA 90 bp AGTGCACACCTACAGCCAAGCCCTAGCATAGCTGAGTGGGAGAGAGGTTTTATTTCTCATGCTTCCGCTTaGTGGCTGGAATCTAGGGGC +
Preference number: 2 (lower is better)
Translates to: SAHLQPSPSIAEWERGFISHASA*WLESRG
Trigger: GCCCCTAGATTCCAGCCACCAAGCGGAAGCATGAGA...AATAAAACCTCTCTCCCACTCAGCTATGCTAGGGCTTGGCTGTAGGTGTGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR CCA 90 bp ATGGGTGCTATTGGCTGTCTTCCCCCTCAGTGTTTAGGAACGTCCCCAAGACGTCGCAAAGTCTACACGTaGACTGGAGAAAGGAAAGGG +
Preference number: 2 (lower is better)
Translates to: MGAIGCLPPQCLGTSPRRRKVYT*TGERKG
Trigger: CCCTTTCCTTTCTCCAGTCCACGTGTAGACTTTGCG...ACGTCTTGGGGACGTTCCTAAACACTGAGGGGGAAGACAGCCAATAGCACCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR GCA 90 bp AATCACCCTAACTATAACGGACGTTCAGAGCTCATGTGGATAAACCCAAAGCCCCATCCGAGACACACATaGTATGGAACACCCGGCCCC +
Preference number: 2 (lower is better)
Translates to: NHPNYNGRSELMWINPKPHPRHT*YGTPGP
Trigger: GGGGCCGGGTGTTCCATAGCATGTGTGTCTCGGATG...GGGCTTTGGGTTTATCCACATGAGCTCTGAACGTCCGTTATAGTTAGGGTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR GCA 90 bp GGTCCTGTTTATCAGCACGTTGGTCCTTTCACAAATGGTGGTGAATCACCTTTACTGCGTCCATGGCACTaGGACGTGAGACAGGGTGTG +
Preference number: 2 (lower is better)
Translates to: GPVYQHVGPFTNGGESPLLRPWH*DVRQGV
Trigger: CACACCCTGTCTCACGTCGCAGTGCCATGGACGCAG...TAAAGGTGATTCACCACCATTTGTGAAAGGACCAACGTGCTGATAAACAGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR CCA 90 bp TCAGTCCTGACATTCAGCTTGTCCACAAGCTCAAAAGGAAATGACAGTAATGGAGAGACACACATGCTATaGAACACCCGGCCCCGCCCC +
Preference number: 2 (lower is better)
Translates to: SVLTFSLSTSSKGNDSNGETHML*NTRPRP
Trigger: GGGGCGGGGCCGGGTGTTCCATAGCATGTGTGTCTC...TCCATTACTGTCATTTCCTTTTGAGCTTGTGGACAAGCTGAATGTCAGGACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR CCA 90 bp TCCCCAAGACGTCTGAAGACAACCTTGAGGAGGGAGCAGTTACTTCCGATCTGCGCACTGCTAAAACAATaGTGCTGTAACTGCTGCGTC +
Preference number: 2 (lower is better)
Translates to: SPRRLKTTLRREQLLPICALLKQ*CCNCCV
Trigger: GACGCAGCAGTTACAGCACCATTGTTTTAGCAGTGC...GCAGATCGGAAGTAACTGCTCCCTCCTCAAGGTTGTCTTCAGACGTCTTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR CCA 90 bp AAACCCAAAGCCCCAAACGCCAAAATGCAACAGGGACGCATCTCCTCTGCTGATCACCGGCTGCACATTTaGTGGGGGTGTATCTTACAA +
Preference number: 2 (lower is better)
Translates to: KPKAPNAKMQQGRISSADHRLHI*WGCILQ
Trigger: TTGTAAGATACACCCCCACCAAATGTGCAGCCGGTG...ATCAGCAGAGGAGATGCGTCCCTGTTGCATTTTGGCGTTTGGGGCTTTGGGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR TCA 90 bp GTTCAGTATTCACGAGGGTCCATTGCTGCATCTCTGAGAACAGGCCATTTGAACTCTCTCCACCAGTGTTaGAGGAACAAGCCTGTGCTG +
Preference number: 2 (lower is better)
Translates to: VQYSRGSIAASLRTGHLNSLHQC*RNKPVL
Trigger: CAGCACAGGCTTGTTCCTTCAACACTGGTGGAGAGA...GTTCAAATGGCCTGTTCTCAGAGATGCAGCAATGGACCCTCGTGAATACTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
3UTR-3UTR GCA 90 bp ATGTTGAACGTCCTCATTACAGGAAGTAGCAAGCCCATATATGAACACGCACTGCATCCGAGACACACATaGTATGGAACACCCGGCCCC +
Preference number: 2 (lower is better)
Translates to: MLNVLITGSSKPIYEHALHPRHT*YGTPGP
Trigger: GGGGCCGGGTGTTCCATAGCATGTGTGTCTCGGATG...CAGTGCGTGTTCATATATGGGCTTGCTACTTCCTGTAATGAGGACGTTCAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR GCA 90 bp TCAGTCCTGACATTCAGCTTGTCCACAAGCTCAAAAGGAAATGACAGTAATGGAGCGGCCACCATCCTTTaGTCTGTTCCTTGGGGGAGG +
Preference number: 2 (lower is better)
Translates to: SVLTFSLSTSSKGNDSNGAATIL*SVPWGR
Trigger: CCTCCCCCAAGGAACAGAGCAAAGGATGGTGGCCGC...TCCATTACTGTCATTTCCTTTTGAGCTTGTGGACAAGCTGAATGTCAGGACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR GCA 90 bp CTCATTACAGGAAGTAGCAAGCCCATATATGAACACGCACTGCTAAAACAATGGTGTGGGCGGGTCTCATaGTTCCGCTTGGTGGCTGGA +
Preference number: 2 (lower is better)
Translates to: LITGSSKPIYEHALLKQWCGRVS*FRLVAG
Trigger: TCCAGCCACCAAGCGGAAGCATGAGACCCGCCCACA...CCATTGTTTTAGCAGTGCGTGTTCATATATGGGCTTGCTACTTCCTGTAATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR GCA 90 bp CCTCAGTGTTTAGGAACGTCCCCAAGACGTCTGAAGACAACCTTGAGGAGGGAGCTGCTAAAACAATGGTaGTGTAACTGCTGCGTCCAT +
Preference number: 2 (lower is better)
Translates to: PQCLGTSPRRLKTTLRRELLKQW*CNCCVH
Trigger: ATGGACGCAGCAGTTACAGCACCATTGTTTTAGCAG...CTCCCTCCTCAAGGTTGTCTTCAGACGTCTTGGGGACGTTCCTAAACACTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR GCA 90 bp AAACCCAAAGCCCCAAACGCCAAAATGCAACAGGGACGCATCTCCTCTGCTGATGATGTAAATAGACAGTaGACACCTACAGCCAAGCCC +
Preference number: 2 (lower is better)
Translates to: KPKAPNAKMQQGRISSADDVNRQ*TPTAKP
Trigger: GGGCTTGGCTGTAGGTGTGCACTGTCTATTTACATC...ATCAGCAGAGGAGATGCGTCCCTGTTGCATTTTGGCGTTTGGGGCTTTGGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR CCA 90 bp CCCCTCACCATGTTGAACGTCCTCATTACAGGAAGTAGCAAGCCCATATATGAATCTCATGCTTCCGCTTaGTGGCTGGAATCTAGGGGC +
Preference number: 2 (lower is better)
Translates to: PLTMLNVLITGSSKPIYESHASA*WLESRG
Trigger: GCCCCTAGATTCCAGCCACCAAGCGGAAGCATGAGA...TTCATATATGGGCTTGCTACTTCCTGTAATGAGGACGTTCAACATGGTGAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR GCA 90 bp TCAGTCCTGACATTCAGCTTGTCCACAAGCTCAAAAGGAAATGACAGTAATGGACATCCGAGACACACATaGTATGGAACACCCGGCCCC +
Preference number: 2 (lower is better)
Translates to: SVLTFSLSTSSKGNDSNGHPRHT*YGTPGP
Trigger: GGGGCCGGGTGTTCCATAGCATGTGTGTCTCGGATG...TCCATTACTGTCATTTCCTTTTGAGCTTGTGGACAAGCTGAATGTCAGGACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR GCA 90 bp CGGATCGGTCCTGTTTATCAGCACGTTGGTCCTTTCACAAATGGTGGTGAATCATTTCCCAAGCAAAACTaGCTTCCGCATCCGAGACAC +
Preference number: 2 (lower is better)
Translates to: RIGPVYQHVGPFTNGGESFPKQN*LPHPRH
Trigger: GTGTCTCGGATGCGGAAGGCAGTTTTGCTTGGGAAA...TGATTCACCACCATTTGTGAAAGGACCAACGTGCTGATAAACAGGACCGATCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR GCA 90 bp AACATCACATTGTCACTCAGAGGAATCATGAGGGAATCCAGGAGAGCCAGTCTCTTCACGAGGGTCCATTaGTGCATCTCTGAGAACAGG +
Preference number: 2 (lower is better)
Translates to: NITLSLRGIMRESRRASLFTRVH*CISENR
Trigger: CCTGTTCTCAGAGATGCAGCAATGGACCCTCGTGAA...GAGACTGGCTCTCCTGGATTCCCTCATGATTCCTCTGAGTGACAATGTGATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
3UTR-3UTR CCA 90 bp AGTGCACACCTACAGCCAAGCCCTAGCATAGCTGAGTGGGAGAGAGGTTTTATTGCACTGCTAAAACAATaGTGCTGTAACTGCTGCGTC +
Preference number: 2 (lower is better)
Translates to: SAHLQPSPSIAEWERGFIALLKQ*CCNCCV
Trigger: GACGCAGCAGTTACAGCACCATTGTTTTAGCAGTGC...AATAAAACCTCTCTCCCACTCAGCTATGCTAGGGCTTGGCTGTAGGTGTGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR GCA 90 bp ATGTTGAACGTCCTCATTACAGGAAGTAGCAAGCCCATATATGAACACGCACTGTTTCCCAAGCAAAACTaGCTTCCGCATCCGAGACAC +
Preference number: 2 (lower is better)
Translates to: MLNVLITGSSKPIYEHALFPKQN*LPHPRH
Trigger: GTGTCTCGGATGCGGAAGGCAGTTTTGCTTGGGAAA...CAGTGCGTGTTCATATATGGGCTTGCTACTTCCTGTAATGAGGACGTTCAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR GCA 90 bp TCCAGGATAAGAATTACTTGTCACTGTATGAGCCAGGAAAATAATGTAATTGGATCCTCTGGGACACTCTaGGGGCACCCAGTGACCAGG +
Preference number: 2 (lower is better)
Translates to: SRIRITCHCMSQENNVIGSSGTL*GHPVTR
Trigger: CCTGGTCACTGGGTGCCCGCAGAGTGTCCCAGAGGA...TCCAATTACATTATTTTCCTGGCTCATACAGTGACAAGTAATTCTTATCCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406326.5
3UTR CAA 90 bp AGTGTATATGATATTCTGAAGAAGACACAGTCGGCCAACATCACATaGTCACTCAGAGGAATCATGAGGGAATCCAGGAGAGCCAGTCTC +
Preference number: 2 (lower is better)
Translates to: SVYDILKKTQSANIT*SLRGIMRESRRASL
Trigger: GAGACTGGCTCTCCTGGATTCCCTCATGATTCCTCTGAGTGACAATGTGATGTTGGCCGACTGTGTCTTCTTCAGAATATCATATACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
3UTR-3UTR GCA 90 bp CGGATCGGTCCTGTTTATCAGCACGTTGGTCCTTTCACAAATGGTGGTGAATCACAGTTACTTCCGATCTaGTTCTTCATCAAGCGCAAA +
Preference number: 2 (lower is better)
Translates to: RIGPVYQHVGPFTNGGESQLLPI*FFIKRK
Trigger: TTTGCGCTTGATGAAGAAGCAGATCGGAAGTAACTG...TGATTCACCACCATTTGTGAAAGGACCAACGTGCTGATAAACAGGACCGATCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR CCA 90 bp TCCAGGATAAGAATTACTTGTCACTGTATGAGCCAGGAAAATAATGTAATTGGAGGCCATTTGAACCAGTaGAGGGTCCCTCCCTCCCTC +
Preference number: 2 (lower is better)
Translates to: SRIRITCHCMSQENNVIGGHLNQ*RVPPSL
Trigger: GAGGGAGGGAGGGACCCTCCACTGGTTCAAATGGCC...TCCAATTACATTATTTTCCTGGCTCATACAGTGACAAGTAATTCTTATCCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406326.5
3UTR-3UTR GCA 90 bp TCCAGGATAAGAATTACTTGTCACTGTATGAGCCAGGAAAATAATGTAATTGGAACGAGGGTCCATTGCTaGATCTCTGAGAACAGGCCA +
Preference number: 2 (lower is better)
Translates to: SRIRITCHCMSQENNVIGTRVHC*ISENRP
Trigger: TGGCCTGTTCTCAGAGATGCAGCAATGGACCCTCGT...TCCAATTACATTATTTTCCTGGCTCATACAGTGACAAGTAATTCTTATCCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406326.5
3UTR GCA 72 bp TGGCGTGCCGGTCTCTCGGGCGCCGGGAGGAGGCGCTaGTGCGGGGACAGCGTTGTCCCTGGTGCCATGGAG +
Preference number: 3 (lower is better)
Translates to: WRAGLSGAGRRR*CGDSVVPGAME
Trigger: CTCCATGGCACCAGGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGCGCCCGAGAGACCGGCACGCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR CAA 90 bp GCTAGTGTGGGCGGGTCTCATGCTTCCGCTTGGTGGCTGGAATCTAGGGGCCGGGCTGCGGGGACAGCGTaGTCCCTGGTGCCATGGAGG +
Preference number: 3 (lower is better)
Translates to: ASVGGSHASAWWLESRGRAAGTA*SLVPWR
Trigger: CCTCCATGGCACCAGGGACAACGCTGTCCCCGCAGC...CCGGCCCCTAGATTCCAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR CAA 90 bp GCTAGTGTGGGCGGGTCTCATGCTTCCGCTTGGTGGCTGGAATCTAGGGGCCGGCCTTTGCTCTGTTCCTaGGGGGAGGGGCCGTGGCGT +
Preference number: 3 (lower is better)
Translates to: ASVGGSHASAWWLESRGRPLLCS*GEGPWR
Trigger: ACGCCACGGCCCCTCCCCCAAGGAACAGAGCAAAGG...CCGGCCCCTAGATTCCAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR CCA 72 bp CTAGTGTGGGCGGGTCTCATGCTTCCGCTTGGTGGCTaGAATCTAGGGGCCGGTGTCCTGTGGGCTCGCGTG +
Preference number: 3 (lower is better)
Translates to: LVWAGLMLPLGG*NLGAGVLWARV
Trigger: CACGCGAGCCCACAGGACACCGGCCCCTAGATTCCAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR CCA 72 bp GAGGCTAGTGTGGGCGGGTCTCATGCTTCCGCTTGGTaGCTGGAATCTAGGGGCCGGTGTCCTGTGGGCTCG +
Preference number: 3 (lower is better)
Translates to: EASVGGSHASAW*LESRGRCPVGS
Trigger: CGAGCCCACAGGACACCGGCCCCTAGATTCCAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGCCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR CCA 72 bp ACAGAGGCTAGTGTGGGCGGGTCTCATGCTTCCGCTTaGTGGCTGGAATCTAGGGGCCGGTGTCCTGTGGGC +
Preference number: 3 (lower is better)
Translates to: TEASVGGSHASA*WLESRGRCPVG
Trigger: GCCCACAGGACACCGGCCCCTAGATTCCAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGCCTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR CAA 90 bp GGTCTCTCGGGCGCCGGGAGGAGGCGCTGCTGCGGGGACAGCGTTGTCCCTGGTAGGGAAATCCCTCGGTaGCATCTGGTTGTAGAAAGA +
Preference number: 3 (lower is better)
Translates to: GLSGAGRRRCCGDSVVPGREIPR*HLVVER
Trigger: TCTTTCTACAACCAGATGCAACCGAGGGATTTCCCT...ACCAGGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGCGCCCGAGAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR CAA 90 bp GAGACAGGGTGTGATGTCCCTAACGGGAACACAGAGGCTAGTGTGGGCGGGTCTGCTGCGGGGACAGCGTaGTCCCTGGTGCCATGGAGG +
Preference number: 3 (lower is better)
Translates to: ETGCDVPNGNTEASVGGSAAGTA*SLVPWR
Trigger: CCTCCATGGCACCAGGGACAACGCTGTCCCCGCAGC...AGACCCGCCCACACTAGCCTCTGTGTTCCCGTTAGGGACATCACACCCTGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR CAA 90 bp AGAGGGATGCGCGCAGGCCCACAGAACCCTCAGGACTCCCGTGGCCCGAGCACACGTCTGAAGACAACCTaGAGGAGGGAGCAGTTACTT +
Preference number: 3 (lower is better)
Translates to: RGMRAGPQNPQDSRGPSTRLKTT*RREQLL
Trigger: AAGTAACTGCTCCCTCCTCAAGGTTGTCTTCAGACG...TGTGCTCGGGCCACGGGAGTCCTGAGGGTTCTGTGGGCCTGCGCGCATCCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
3UTR CCA 72 bp TCTGCTGATGGGATGCCAAGGACACCCCCGCAGGGCTaGGAGCTGGCGAAGTCAGTCCTGACATTCAGCTTG +
Preference number: 3 (lower is better)
Translates to: SADGMPRTPPQG*ELAKSVLTFSL
Trigger: CAAGCTGAATGTCAGGACTGACTTCGCCAGCTCCCAGCCCTGCGGGGGTGTCCTTGGCATCCCATCAGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
3UTR GCA 72 bp GCACTTCTAGAGTCCAGATCGGCCACAGTGTCAGCATaGAGGCTCAACACGGGGTTAGCACTGGCGGGAGGA +
Preference number: 3 (lower is better)
Translates to: ALLESRSATVSA*RLNTGLALAGG
Trigger: TCCTCCCGCCAGTGCTAACCCCGTGTTGAGCCTGCATGCTGACACTGTGGCCGATCTGGACTCTAGAAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
3UTR CCA 72 bp GGTGTGATGTCCCTAACGGGAACACAGAGGCTAGTGTaGGCGGGTCTCATGCTTCCGCTTGGTGGCTGGAAT +
Preference number: 3 (lower is better)
Translates to: GVMSLTGTQRLV*AGLMLPLGGWN
Trigger: ATTCCAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGCCTCTGTGTTCCCGTTAGGGACATCACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR CAA 90 bp CACATCCCCACTTCCCTCCGACCAGATGTCGTGGCCAGAGCTGGCTTCCCCTTCAGGGAAATCCCTCGGTaGCATCTGGTTGTAGAAAGA +
Preference number: 3 (lower is better)
Translates to: HIPTSLRPDVVARAGFPFREIPR*HLVVER
Trigger: TCTTTCTACAACCAGATGCAACCGAGGGATTTCCCT...GAAGGGGAAGCCAGCTCTGGCCACGACATCTGGTCGGAGGGAAGTGGGGATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
3UTR TCA 72 bp CACCCCCGCAGGGCTGGGAGCTGGCGAAGTCAGTCCTaGCATTCAGCTTGTCCACAAGCTCAAAAGGAAATG +
Preference number: 3 (lower is better)
Translates to: HPRRAGSWRSQS*HSACPQAQKEM
Trigger: CATTTCCTTTTGAGCTTGTGGACAAGCTGAATGTCAGGACTGACTTCGCCAGCTCCCAGCCCTGCGGGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR CAA 90 bp AAATGCAACAGGGACGCATCTCCTCTGCTGATGGGATGCCAAGGACACCCCCGCGTCCTGACATTCAGCTaGTCCACAAGCTCAAAAGGA +
Preference number: 3 (lower is better)
Translates to: KCNRDASPLLMGCQGHPRVLTFS*STSSKG
Trigger: TCCTTTTGAGCTTGTGGACAAGCTGAATGTCAGGAC...GCGGGGGTGTCCTTGGCATCCCATCAGCAGAGGAGATGCGTCCCTGTTGCATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR CAA 90 bp GGATCGGTCCTGTTTATCAGCACGTTGGTCCTTTCACAAATGGTGGTGAATCACTGCGGCCACCATCCTTaGCTCTGTTCCTTGGGGGAG +
Preference number: 3 (lower is better)
Translates to: GSVLFISTLVLSQMVVNHCGHHP*LCSLGE
Trigger: CTCCCCCAAGGAACAGAGCAAAGGATGGTGGCCGCA...GTGATTCACCACCATTTGTGAAAGGACCAACGTGCTGATAAACAGGACCGATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR CAA 90 bp ATGGGTGCTATTGGCTGTCTTCCCCCTCAGTGTTTAGGAACGTCCCCAAGACGTAGGGAAATCCCTCGGTaGCATCTGGTTGTAGAAAGA +
Preference number: 3 (lower is better)
Translates to: MGAIGCLPPQCLGTSPRRREIPR*HLVVER
Trigger: TCTTTCTACAACCAGATGCAACCGAGGGATTTCCCT...ACGTCTTGGGGACGTTCCTAAACACTGAGGGGGAAGACAGCCAATAGCACCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR CAA 90 bp ATGTTGAACGTCCTCATTACAGGAAGTAGCAAGCCCATATATGAACACGCACTGTGCGGCCACCATCCTTaGCTCTGTTCCTTGGGGGAG +
Preference number: 3 (lower is better)
Translates to: MLNVLITGSSKPIYEHALCGHHP*LCSLGE
Trigger: CTCCCCCAAGGAACAGAGCAAAGGATGGTGGCCGCA...CAGTGCGTGTTCATATATGGGCTTGCTACTTCCTGTAATGAGGACGTTCAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR CAA 90 bp GAGAGCCAGTCTCCTTCCCATGATTATCAGTTCAGTATTCACGAGGGTCCATTGCTGAGAACAGGCCATTaGAACCAGTGGAGGGTCCCT +
Preference number: 3 (lower is better)
Translates to: ESQSPSHDYQFSIHEGPLLRTGH*NQWRVP
Trigger: AGGGACCCTCCACTGGTTCAAATGGCCTGTTCTCAG...CAATGGACCCTCGTGAATACTGAACTGATAATCATGGGAAGGAGACTGGCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
3UTR CCA 72 bp AGCAAGCCCATATATGAACACGCACTGCTAAAACAATaGTGCTGTAACTGCTGCGTCCATGGCACTGCGACG +
Preference number: 3 (lower is better)
Translates to: SKPIYEHALLKQ*CCNCCVHGTAT
Trigger: CGTCGCAGTGCCATGGACGCAGCAGTTACAGCACCATTGTTTTAGCAGTGCGTGTTCATATATGGGCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR GCA 72 bp AAGACAACCTTGAGGAGGGAGCAGTTACTTCCGATCTaGTTCTTCATCAAGCGCAAAGTCTACACGTGGACT +
Preference number: 3 (lower is better)
Translates to: KTTLRREQLLPI*FFIKRKVYTWT
Trigger: AGTCCACGTGTAGACTTTGCGCTTGATGAAGAAGCAGATCGGAAGTAACTGCTCCCTCCTCAAGGTTGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR GCA 72 bp ATAATGTTTTATTCCATGGATGAACAGACGCTACCATaGCACATCCCCACTTCCCTCCGACCAGATGTCGTG +
Preference number: 3 (lower is better)
Translates to: IMFYSMDEQTLP*HIPTSLRPDVV
Trigger: CACGACATCTGGTCGGAGGGAAGTGGGGATGTGGCATGGTAGCGTCTGTTCATCCATGGAATAAAACATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
3UTR-3UTR CAA 90 bp TGTATGAGCCAGGAAAATAATGTAATTGGAGGCTCCTGGAGACCTCAAGTGTATGGAAGGCAGTATTTCTaGGGCCTGATGACAGCGTGT +
Preference number: 3 (lower is better)
Translates to: CMSQENNVIGGSWRPQVYGRQYF*GLMTAC
Trigger: ACACGCTGTCATCAGGCCCAAGAAATACTGCCTTCC...ATACACTTGAGGTCTCCAGGAGCCTCCAATTACATTATTTTCCTGGCTCATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406326.5
3UTR TCA 72 bp GGAGGCTCCTGGAGACCTCAAGTGTATATGATATTCTaGAGAAGACACAGTCGGCCAACATCACATTGTCAC +
Preference number: 3 (lower is better)
Translates to: GGSWRPQVYMIF*RRHSRPTSHCH
Trigger: GTGACAATGTGATGTTGGCCGACTGTGTCTTCTTCAGAATATCATATACACTTGAGGTCTCCAGGAGCCTCC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
3UTR GCA 72 bp CCCATGATTATCAGTTCAGTATTCACGAGGGTCCATTaGTGCATCTCTGAGAACAGGCCATTTGAACCAGTG +
Preference number: 3 (lower is better)
Translates to: PMIISSVFTRVH*CISENRPFEPV
Trigger: CACTGGTTCAAATGGCCTGTTCTCAGAGATGCAGCAATGGACCCTCGTGAATACTGAACTGATAATCATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
3UTR GCA 72 bp ATGATTATCAGTTCAGTATTCACGAGGGTCCATTGCTaGATCTCTGAGAACAGGCCATTTGAACCAGTGGAG +
Preference number: 3 (lower is better)
Translates to: MIISSVFTRVHC*ISENRPFEPVE
Trigger: CTCCACTGGTTCAAATGGCCTGTTCTCAGAGATGCAGCAATGGACCCTCGTGAATACTGAACTGATAATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
3UTR CCA 72 bp AATCACCCTAACTATAACGGACGTTCAGAGCTCATGTaGATAAACCCAAAGCCCCAAACGCCAAAATGCAAC +
Preference number: 3 (lower is better)
Translates to: NHPNYNGRSELM*INPKPQTPKCN
Trigger: GTTGCATTTTGGCGTTTGGGGCTTTGGGTTTATCCACATGAGCTCTGAACGTCCGTTATAGTTAGGGTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
3UTR GCA 72 bp ATACAAGAGAATGAAATATACACTGGGAACACCGGCTaGACATTTGGTGGGGGTGTATCTTACAAGGCTAAC +
Preference number: 3 (lower is better)
Translates to: IQENEIYTGNTG*TFGGGVSYKAN
Trigger: GTTAGCCTTGTAAGATACACCCCCACCAAATGTGCAGCCGGTGTTCCCAGTGTATATTTCATTCTCTTGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
3UTR TCA 72 bp TGTTTATCAGCACGTTGGTCCTTTCACAAATGGTGGTaGATCACCTTTAAAACACCCAGTGATGGAGACCTT +
Preference number: 3 (lower is better)
Translates to: CLSARWSFHKWW*ITFKTPSDGDL
Trigger: AAGGTCTCCATCACTGGGTGTTTTAAAGGTGATTCACCACCATTTGTGAAAGGACCAACGTGCTGATAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp TGCCGGTCTCTCGGGCGCCGGGAGGAGGCGCTGCTGCGGGGACAGCGTTGTCCCGGCGAGAGGCAGCTCTaGCTGCGCGCGTGTCCACCG +
Preference number: 4 (lower is better)
Translates to: CRSLGRREEALLRGQRCPGERQL*LRACPP
Trigger: CGGTGGACACGCGCGCAGTCAGAGCTGCCTCTCGCC...GGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGCGCCCGAGAGACCGGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404039.5
CDS-3UTR GCA 90 bp GGTCTCTCGGGCGCCGGGAGGAGGCGCTGCTGCGGGGACAGCGTTGTCCCTGGTCCGAGTGATGCGCGCTaGCTCCTCGCCCGCCTCCCG +
Preference number: 4 (lower is better)
Translates to: GLSGAGRRRCCGDSVVPGPSDAR*LLARLP
Trigger: CGGGAGGCGGGCGAGGAGGCAGCGCGCATCACTCGG...ACCAGGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGCGCCCGAGAGACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332007.7
CDS-3UTR CCA 90 bp TGCCGGTCTCTCGGGCGCCGGGAGGAGGCGCTGCTGCGGGGACAGCGTTGTCCCCCGGCAAGTGGCGGCTaGGTGCAGGAAGGGGACCCG +
Preference number: 4 (lower is better)
Translates to: CRSLGRREEALLRGQRCPPASGG*VQEGDP
Trigger: CGGGTCCCCTTCCTGCACCCAGCCGCCACTTGCCGG...GGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGCGCCCGAGAGACCGGCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000332007.7
CDS-3UTR GCA 90 bp TGCCGGTCTCTCGGGCGCCGGGAGGAGGCGCTGCTGCGGGGACAGCGTTGTCCCCCACCGCGCCGTGGCTaGTCACCATCACCGTCTCCC +
Preference number: 4 (lower is better)
Translates to: CRSLGRREEALLRGQRCPPPRRG*SPSPSP
Trigger: GGGAGACGGTGATGGTGAGCAGCCACGGCGCGGTGG...GGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGCGCCCGAGAGACCGGCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GCCGTGGCGTGCCGGTCTCTCGGGCGCCGGGAGGAGGCGCTGCTGCGGGGACAGGAGACACACATGCTATaGAACACCCGGCCCCGCCCC +
Preference number: 4 (lower is better)
Translates to: AVACRSLGRREEALLRGQETHML*NTRPRP
Trigger: GGGGCGGGGCCGGGTGTTCCATAGCATGTGTGTCTC...CTGTCCCCGCAGCAGCGCCTCCTCCCGGCGCCCGAGAGACCGGCACGCCACGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GCCGTGGCGTGCCGGTCTCTCGGGCGCCGGGAGGAGGCGCTGCTGCGGGGACAGCTTTGCTCTGTTCCTTaGGGGAGGGGCCGTGGCGTG +
Preference number: 4 (lower is better)
Translates to: AVACRSLGRREEALLRGQLCSVP*GRGRGV
Trigger: CACGCCACGGCCCCTCCCCCAAGGAACAGAGCAAAG...CTGTCCCCGCAGCAGCGCCTCCTCCCGGCGCCCGAGAGACCGGCACGCCACGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GCGCCGGGAGGAGGCGCTGCTGCGGGGACAGCGTTGTCCCTGGTGCCATGGAGGTCCTGTGGGCTCGCGTaGGGCCTGCGGCCACCATCC +
Preference number: 4 (lower is better)
Translates to: APGGGAAAGTALSLVPWRSCGLA*GLRPPS
Trigger: GGATGGTGGCCGCAGGCCCCACGCGAGCCCACAGGA...CCTCCATGGCACCAGGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp TGCCGGTCTCTCGGGCGCCGGGAGGAGGCGCTGCTGCGGGGACAGCGTTGTCCCGTGCCATGGAGGCCGTaGGTGATGACCCCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: CRSLGRREEALLRGQRCPVPWRP*VMTPGK
Trigger: CTTCCCCGGGGTCATCACTCACGGCCTCCATGGCAC...GGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGCGCCCGAGAGACCGGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp GCGCCGGGAGGAGGCGCTGCTGCGGGGACAGCGTTGTCCCTGGTGCCATGGAGGGGGAGGAGGCGCTGCTaGGGGGACAGCGTTGTCCCT +
Preference number: 4 (lower is better)
Translates to: APGGGAAAGTALSLVPWRGRRRC*GDSVVP
Trigger: AGGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCC...CCTCCATGGCACCAGGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GCCGTGGCGTGCCGGTCTCTCGGGCGCCGGGAGGAGGCGCTGCTGCGGGGACAGCACCTTCCTTGCCAGTaGAGACCACACGGATGGCCT +
Preference number: 4 (lower is better)
Translates to: AVACRSLGRREEALLRGQHLPCQ*RPHGWP
Trigger: AGGCCATCCGTGTGGTCTCCACTGGCAAGGAAGGTG...CTGTCCCCGCAGCAGCGCCTCCTCCCGGCGCCCGAGAGACCGGCACGCCACGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GCGCCGGGAGGAGGCGCTGCTGCGGGGACAGCGTTGTCCCTGGTGCCATGGAGGACCACCACCGCGCCGTaGCTGCTCACCATCACCGTC +
Preference number: 4 (lower is better)
Translates to: APGGGAAAGTALSLVPWRTTTAP*LLTITV
Trigger: GACGGTGATGGTGAGCAGCCACGGCGCGGTGGTGGT...CCTCCATGGCACCAGGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp GCCGTGGCGTGCCGGTCTCTCGGGCGCCGGGAGGAGGCGCTGCTGCGGGGACAGAGCTCCTGTTCCTGCTaGTGCACGGATTTCCCCGAA +
Preference number: 4 (lower is better)
Translates to: AVACRSLGRREEALLRGQSSCSC*CTDFPE
Trigger: TTCGGGGAAATCCGTGCAGCAGCAGGAACAGGAGCT...CTGTCCCCGCAGCAGCGCCTCCTCCCGGCGCCCGAGAGACCGGCACGCCACGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332007.7
CDS-3UTR GCA 90 bp GCCGTGGCGTGCCGGTCTCTCGGGCGCCGGGAGGAGGCGCTGCTGCGGGGACAGACTGGATGTTGTCGTTaGTGCTGTTGGGCTGGGACG +
Preference number: 4 (lower is better)
Translates to: AVACRSLGRREEALLRGQTGCCR*CCWAGT
Trigger: CGTCCCAGCCCAACAGCAGCAACGACAACATCCAGT...CTGTCCCCGCAGCAGCGCCTCCTCCCGGCGCCCGAGAGACCGGCACGCCACGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp GCGCCGGGAGGAGGCGCTGCTGCGGGGACAGCGTTGTCCCTGGTGCCATGGAGGTCTGGCTGCCTGGGGTaGCATCCACCACCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: APGGGAAAGTALSLVPWRSGCLG*HPPPGA
Trigger: TGCTCCTGGTGGTGGATGGCACCCCAGGCAGCCAGA...CCTCCATGGCACCAGGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp GCCGTGGCGTGCCGGTCTCTCGGGCGCCGGGAGGAGGCGCTGCTGCGGGGACAGCAATGGTGCTGTAACTaGTGCGTCCATGGCACTGCG +
Preference number: 4 (lower is better)
Translates to: AVACRSLGRREEALLRGQQWCCN*CVHGTA
Trigger: CGCAGTGCCATGGACGCAGCAGTTACAGCACCATTG...CTGTCCCCGCAGCAGCGCCTCCTCCCGGCGCCCGAGAGACCGGCACGCCACGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp TGCCGGTCTCTCGGGCGCCGGGAGGAGGCGCTGCTGCGGGGACAGCGTTGTCCCCGTAGGCTAGGATCTTaGTCACGTCCCAGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: CRSLGRREEALLRGQRCPRRLGS*SRPSPR
Trigger: CCGGGGACTGGGACGTGACCAAGATCCTAGCCTACG...GGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGCGCCCGAGAGACCGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GCCGGGAGGAGGCGCTGCTGCGGGGACAGCGTTGTCCCTGGTGCCATGGAGGCCCACACTCTGGCTGCCTaGGGTGCCATCCACCACCAG +
Preference number: 4 (lower is better)
Translates to: AGRRRCCGDSVVPGAMEAHTLAA*GAIHHQ
Trigger: CTGGTGGTGGATGGCACCCCAGGCAGCCAGAGTGTG...GGCCTCCATGGCACCAGGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GCGCCGGGAGGAGGCGCTGCTGCGGGGACAGCGTTGTCCCTGGTGCCATGGAGGGAGACACACATGCTATaGAACACCCGGCCCCGCCCC +
Preference number: 4 (lower is better)
Translates to: APGGGAAAGTALSLVPWRETHML*NTRPRP
Trigger: GGGGCGGGGCCGGGTGTTCCATAGCATGTGTGTCTC...CCTCCATGGCACCAGGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp TGCCGGTCTCTCGGGCGCCGGGAGGAGGCGCTGCTGCGGGGACAGCGTTGTCCCTCAACCTCCTGCTCGTaGCAGGAAGGTCACGGAGCC +
Preference number: 4 (lower is better)
Translates to: CRSLGRREEALLRGQRCPSTSCS*QEGHGA
Trigger: GGCTCCGTGACCTTCCTGCCACGAGCAGGAGGTTGA...GGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGCGCCCGAGAGACCGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp GCGCCGGGAGGAGGCGCTGCTGCGGGGACAGCGTTGTCCCTGGTGCCATGGAGGCGTAGGCGAGTCTCGTaGCATCCGGAGACCACCAGT +
Preference number: 4 (lower is better)
Translates to: APGGGAAAGTALSLVPWRRRRVS*HPETTS
Trigger: ACTGGTGGTCTCCGGATGGCACGAGACTCGCCTACG...CCTCCATGGCACCAGGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp GCGCCGGGAGGAGGCGCTGCTGCGGGGACAGCGTTGTCCCTGGTGCCATGGAGGCCTCGTGTTTCTTCGTaGAGACCCCCGTGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: APGGGAAAGTALSLVPWRPRVSS*RPPWWR
Trigger: ACGCCACCACGGGGGTCTGCACGAAGAAACACGAGG...CCTCCATGGCACCAGGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp CTTCCGCTTGGTGGCTGGAATCTAGGGGCCGGTGTCCTGTGGGCTCGCGTGGGGGGCTCGCGTGGGGCCTaGGGCCACCATCCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: LPLGGWNLGAGVLWARVGGSRGA*GHHPLL
Trigger: GAGCAAAGGATGGTGGCCGCAGGCCCCACGCGAGCC...CCCCACGCGAGCCCACAGGACACCGGCCCCTAGATTCCAGCCACCAAGCGGAAG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GCGCCGGGAGGAGGCGCTGCTGCGGGGACAGCGTTGTCCCTGGTGCCATGGAGGCTTCCGCTTGGTGGCTaGAATCTAGGGGCCGGTGTC +
Preference number: 4 (lower is better)
Translates to: APGGGAAAGTALSLVPWRLPLGG*NLGAGV
Trigger: GACACCGGCCCCTAGATTCCAGCCACCAAGCGGAAG...CCTCCATGGCACCAGGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp AGAGGGATGCGCGCAGGCCCACAGAACCCTCAGGACTCCCGTGGCCCGAGCACACAGCGGTCGCCGCTCTaGTCCCTAAGGGCAGGGACC +
Preference number: 4 (lower is better)
Translates to: RGMRAGPQNPQDSRGPSTQRSPL*SLRAGT
Trigger: GGTCCCTGCCCTTAGGGACCAGAGCGGCGACCGCTG...TGTGCTCGGGCCACGGGAGTCCTGAGGGTTCTGTGGGCCTGCGCGCATCCCTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404039.5
CDS-3UTR TCA 90 bp GCTAGTGTGGGCGGGTCTCATGCTTCCGCTTGGTGGCTGGAATCTAGGGGCCGGGGAAGGGGACCCGAGTaGTGCGCGCTGCCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: ASVGGSHASAWWLESRGRGRGPE*CALPPR
Trigger: GCGAGGAGGCAGCGCGCATCACTCGGGTCCCCTTCC...CCGGCCCCTAGATTCCAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332007.7
CDS-3UTR TCA 90 bp AGAGGGATGCGCGCAGGCCCACAGAACCCTCAGGACTCCCGTGGCCCGAGCACAGTGCCATGGAGGCCGTaGGTGATGACCCCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: RGMRAGPQNPQDSRGPSTVPWRP*VMTPGK
Trigger: CTTCCCCGGGGTCATCACTCACGGCCTCCATGGCAC...TGTGCTCGGGCCACGGGAGTCCTGAGGGTTCTGTGGGCCTGCGCGCATCCCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp GCCGTGGCGTGCCGGTCTCTCGGGCGCCGGGAGGAGGCGCTGCTGCGGGGACAGTCATGGGAAAGAGCTTaGTACGGTACCAAGGAGGAC +
Preference number: 4 (lower is better)
Translates to: AVACRSLGRREEALLRGQSWERA*YGTKED
Trigger: GTCCTCCTTGGTACCGTATCAAGCTCTTTCCCATGA...CTGTCCCCGCAGCAGCGCCTCCTCCCGGCGCCCGAGAGACCGGCACGCCACGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp GCGCCGGGAGGAGGCGCTGCTGCGGGGACAGCGTTGTCCCTGGTGCCATGGAGGGGATGTTGTCGTTGCTaGTGTTGGGCTGGGACGAGG +
Preference number: 4 (lower is better)
Translates to: APGGGAAAGTALSLVPWRGCCRC*CWAGTR
Trigger: CCTCGTCCCAGCCCAACAGCAGCAACGACAACATCC...CCTCCATGGCACCAGGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp AGGACACCCCCGCAGGGCTGGGAGCTGGCGAAGTCAGTCCTGACATTCAGCTTGGCAGGCGGTGCGGGGTaGAGCGGTCGCCGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: RTPPQGWELAKSVLTFSLAGGAG*SGRRSG
Trigger: ACCAGAGCGGCGACCGCTGCACCCCGCACCGCCTGC...CAAGCTGAATGTCAGGACTGACTTCGCCAGCTCCCAGCCCTGCGGGGGTGTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404039.5
CDS-3UTR CCA 90 bp GCGCCGGGAGGAGGCGCTGCTGCGGGGACAGCGTTGTCCCTGGTGCCATGGAGGTTGCTGCTGTTGGGCTaGGACGAGGACACCGTGATG +
Preference number: 4 (lower is better)
Translates to: APGGGAAAGTALSLVPWRLLLLG*DEDTVM
Trigger: CATCACGGTGTCCTCGTCCCAGCCCAACAGCAGCAA...CCTCCATGGCACCAGGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GCGCCGGGAGGAGGCGCTGCTGCGGGGACAGCGTTGTCCCTGGTGCCATGGAGGAGCGCGGAGACTCGATaGGCTACCTTGGTCATCTCG +
Preference number: 4 (lower is better)
Translates to: APGGGAAAGTALSLVPWRSAETR*ATLVIS
Trigger: CGAGATGACCAAGGTAGCCCATCGAGTCTCCGCGCT...CCTCCATGGCACCAGGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp AGGACACCCCCGCAGGGCTGGGAGCTGGCGAAGTCAGTCCTGACATTCAGCTTGTTGGGGGAGGGGCCGTaGCGTGCCGGTCTCTCGGGC +
Preference number: 4 (lower is better)
Translates to: RTPPQGWELAKSVLTFSLLGEGP*RAGLSG
Trigger: GCCCGAGAGACCGGCACGCCACGGCCCCTCCCCCAA...CAAGCTGAATGTCAGGACTGACTTCGCCAGCTCCCAGCCCTGCGGGGGTGTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GCGCCGGGAGGAGGCGCTGCTGCGGGGACAGCGTTGTCCCTGGTGCCATGGAGGACACAGAGGCTAGTGTaGGCGGGTCTCATGCTTCCG +
Preference number: 4 (lower is better)
Translates to: APGGGAAAGTALSLVPWRTQRLV*AGLMLP
Trigger: CGGAAGCATGAGACCCGCCCACACTAGCCTCTGTGT...CCTCCATGGCACCAGGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp TCTCATGCTTCCGCTTGGTGGCTGGAATCTAGGGGCCGGTGTCCTGTGGGCTCGCTCCGCGCCTGGTACTaGAACCGGGGCCGGCCACCC +
Preference number: 4 (lower is better)
Translates to: SHASAWWLESRGRCPVGSLRAWY*NRGRPP
Trigger: GGGTGGCCGGCCCCGGTTCCAGTACCAGGCGCGGAG...CGAGCCCACAGGACACCGGCCCCTAGATTCCAGCCACCAAGCGGAAGCATGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377770.8
CDS-3UTR GCA 90 bp GGTCTCTCGGGCGCCGGGAGGAGGCGCTGCTGCGGGGACAGCGTTGTCCCTGGTTCACAGGAGAGGCACTaGCTGTTGAAGTTGCCCACC +
Preference number: 4 (lower is better)
Translates to: GLSGAGRRRCCGDSVVPGSQERH*LLKLPT
Trigger: GGTGGGCAACTTCAACAGGCAGTGCCTCTCCTGTGA...ACCAGGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGCGCCCGAGAGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp TGCCGGTCTCTCGGGCGCCGGGAGGAGGCGCTGCTGCGGGGACAGCGTTGTCCCGTCCTGTCAATGTACTaGTCCTTCAGCATCGTCCGC +
Preference number: 4 (lower is better)
Translates to: CRSLGRREEALLRGQRCPVLSMY*SFSIVR
Trigger: GCGGACGATGCTGAAGGAGCAGTACATTGACAGGAC...GGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGCGCCCGAGAGACCGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp GCCGTGGCGTGCCGGTCTCTCGGGCGCCGGGAGGAGGCGCTGCTGCGGGGACAGGATGTAAATAGACAGTaGACACCTACAGCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: AVACRSLGRREEALLRGQDVNRQ*TPTAKP
Trigger: GGGCTTGGCTGTAGGTGTGCACTGTCTATTTACATC...CTGTCCCCGCAGCAGCGCCTCCTCCCGGCGCCCGAGAGACCGGCACGCCACGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp CTTCCGCTTGGTGGCTGGAATCTAGGGGCCGGTGTCCTGTGGGCTCGCGTGGGGACGATGGGAGAGGGATaGGCGCAGGCCCACAGAACC +
Preference number: 4 (lower is better)
Translates to: LPLGGWNLGAGVLWARVGTMGEG*AQAHRT
Trigger: GGTTCTGTGGGCCTGCGCGCATCCCTCTCCCATCGT...CCCCACGCGAGCCCACAGGACACCGGCCCCTAGATTCCAGCCACCAAGCGGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp TGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCGGCCCCGCCCCGCCCCCTCTGCTGATGGGATaGCAAGGACACCCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: CLPHPRHTCYGTPGPAPPPLLMG*QGHPRR
Trigger: CCTGCGGGGGTGTCCTTGGCATCCCATCAGCAGAGG...GGGCGGGGCGGGGCCGGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp GCGCCGGGAGGAGGCGCTGCTGCGGGGACAGCGTTGTCCCTGGTGCCATGGAGGGAACAGACGCTACCATaGCACATCCCCACTTCCCTC +
Preference number: 4 (lower is better)
Translates to: APGGGAAAGTALSLVPWREQTLP*HIPTSL
Trigger: GAGGGAAGTGGGGATGTGGCATGGTAGCGTCTGTTC...CCTCCATGGCACCAGGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GCCGGGAGGAGGCGCTGCTGCGGGGACAGCGTTGTCCCTGGTGCCATGGAGGCCTTTCCCCGAAGCGCTTaGCTCCTTGGCTGTGGTCAT +
Preference number: 4 (lower is better)
Translates to: AGRRRCCGDSVVPGAMEAFPRSA*LLGCGH
Trigger: ATGACCACAGCCAAGGAGCCAAGCGCTTCGGGGAAA...GGCCTCCATGGCACCAGGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332007.7
CDS-3UTR CCA 90 bp TGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCGGCCCCGCCCCGCCCCACACTCTGGCTGCCTaGGGTGCCATCCACCACCAG +
Preference number: 4 (lower is better)
Translates to: CLPHPRHTCYGTPGPAPPHTLAA*GAIHHQ
Trigger: CTGGTGGTGGATGGCACCCCAGGCAGCCAGAGTGTG...GGGCGGGGCGGGGCCGGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp TCTCATGCTTCCGCTTGGTGGCTGGAATCTAGGGGCCGGTGTCCTGTGGGCTCGTCCTGTGGGCTCGCGTaGGGCCTGCGGCCACCATCC +
Preference number: 4 (lower is better)
Translates to: SHASAWWLESRGRCPVGSSCGLA*GLRPPS
Trigger: GGATGGTGGCCGCAGGCCCCACGCGAGCCCACAGGA...CGAGCCCACAGGACACCGGCCCCTAGATTCCAGCCACCAAGCGGAAGCATGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp GCCGGGAGGAGGCGCTGCTGCGGGGACAGCGTTGTCCCTGGTGCCATGGAGGCCGGGACGAGGACACCGTaGTGTGATAGAATTTCCCTC +
Preference number: 4 (lower is better)
Translates to: AGRRRCCGDSVVPGAMEAGTRTP*CDRISL
Trigger: GAGGGAAATTCTATCACATCACGGTGTCCTCGTCCC...GGCCTCCATGGCACCAGGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp GCGCCGGGAGGAGGCGCTGCTGCGGGGACAGCGTTGTCCCTGGTGCCATGGAGGCGTCCTCTTTCGCTGTaGCTGTCAGCAGTTTGTCCT +
Preference number: 4 (lower is better)
Translates to: APGGGAAAGTALSLVPWRRPLSL*LSAVCP
Trigger: AGGACAAACTGCTGACAGTCACAGCGAAAGAGGACG...CCTCCATGGCACCAGGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp GCCGGGAGGAGGCGCTGCTGCGGGGACAGCGTTGTCCCTGGTGCCATGGAGGCCAGCAAAACAACCCCATaGCGGAGACAGTGGAGCATC +
Preference number: 4 (lower is better)
Translates to: AGRRRCCGDSVVPGAMEASKTTP*RRQWSI
Trigger: GATGCTCCACTGTCTCCGTCATGGGGTTGTTTTGCT...GGCCTCCATGGCACCAGGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp TCTCATGCTTCCGCTTGGTGGCTGGAATCTAGGGGCCGGTGTCCTGTGGGCTCGGGGAGGAGGCGCTGCTaGGGGGACAGCGTTGTCCCT +
Preference number: 4 (lower is better)
Translates to: SHASAWWLESRGRCPVGSGRRRC*GDSVVP
Trigger: AGGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCC...CGAGCCCACAGGACACCGGCCCCTAGATTCCAGCCACCAAGCGGAAGCATGAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp CCCCCGCAGGGCTGGGAGCTGGCGAAGTCAGTCCTGACATTCAGCTTGTCCACAGGCTCGCGTGGGGCCTaGGGCCACCATCCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: PPQGWELAKSVLTFSLSTGSRGA*GHHPLL
Trigger: GAGCAAAGGATGGTGGCCGCAGGCCCCACGCGAGCC...TGTGGACAAGCTGAATGTCAGGACTGACTTCGCCAGCTCCCAGCCCTGCGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp GCCGTGGCGTGCCGGTCTCTCGGGCGCCGGGAGGAGGCGCTGCTGCGGGGACAGCTGCTAAAACAATGGTaGTGTAACTGCTGCGTCCAT +
Preference number: 4 (lower is better)
Translates to: AVACRSLGRREEALLRGQLLKQW*CNCCVH
Trigger: ATGGACGCAGCAGTTACAGCACCATTGTTTTAGCAG...CTGTCCCCGCAGCAGCGCCTCCTCCCGGCGCCCGAGAGACCGGCACGCCACGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp GGTCTCTCGGGCGCCGGGAGGAGGCGCTGCTGCGGGGACAGCGTTGTCCCTGGTCCCCAAACGCCAAAATaGAACAGGGACGCATCTCCT +
Preference number: 4 (lower is better)
Translates to: GLSGAGRRRCCGDSVVPGPQTPK*NRDASP
Trigger: AGGAGATGCGTCCCTGTTGCATTTTGGCGTTTGGGG...ACCAGGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGCGCCCGAGAGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp TGCCGGTCTCTCGGGCGCCGGGAGGAGGCGCTGCTGCGGGGACAGCGTTGTCCCCGCAAAGTCTACACGTaGACTGGAGAAAGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: CRSLGRREEALLRGQRCPRKVYT*TGERKG
Trigger: CCCTTTCCTTTCTCCAGTCCACGTGTAGACTTTGCG...GGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGCGCCCGAGAGACCGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GCCGGGAGGAGGCGCTGCTGCGGGGACAGCGTTGTCCCTGGTGCCATGGAGGCCCCTTCCAGACCTAGCTaGCTTTGTAGTCGTTCAGGC +
Preference number: 4 (lower is better)
Translates to: AGRRRCCGDSVVPGAMEAPSRPS*LCSRSG
Trigger: GCCTGAACGACTACAAAGCCAGCTAGGTCTGGAAGG...GGCCTCCATGGCACCAGGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp CGACGTGAGACAGGGTGTGATGTCCCTAACGGGAACACAGAGGCTAGTGTGGGCGGGGCAGGTGGGGTCTaGCGGCGAGTTGGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: RRETGCDVPNGNTEASVGGAGGV*RRVGSH
Trigger: GTGGCTCCCAACTCGCCGTCAGACCCCACCTGCCCC...GCCCACACTAGCCTCTGTGTTCCCGTTAGGGACATCACACCCTGTCTCACGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332007.7
CDS-3UTR TCA 90 bp TGCCGGTCTCTCGGGCGCCGGGAGGAGGCGCTGCTGCGGGGACAGCGTTGTCCCCATACAGCCAGTCACTaGGGCCATTGTAAATCACAC +
Preference number: 4 (lower is better)
Translates to: CRSLGRREEALLRGQRCPHTASH*GHCKSH
Trigger: GTGTGATTTACAATGGCCTCAGTGACTGGCTGTATG...GGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGCGCCCGAGAGACCGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp GCGCCGGGAGGAGGCGCTGCTGCGGGGACAGCGTTGTCCCTGGTGCCATGGAGGGTGAATGTCTGGCCTTaGTTTTCTCCCTTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: APGGGAAAGTALSLVPWRVNVWP*FSPFAG
Trigger: CCCAGCAAAGGGAGAAAATCAAGGCCAGACATTCAC...CCTCCATGGCACCAGGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp GGTCTCTCGGGCGCCGGGAGGAGGCGCTGCTGCGGGGACAGCGTTGTCCCTGGTCGGCAGTGGGATGAATaGTCAGGAACTGCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: GLSGAGRRRCCGDSVVPGRQWDE*SGTAVL
Trigger: AAGAACAGCAGTTCCTGATCATTCATCCCACTGCCG...ACCAGGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGCGCCCGAGAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp GCCGGGAGGAGGCGCTGCTGCGGGGACAGCGTTGTCCCTGGTGCCATGGAGGCCGGTGTCGGTGAAGGTTaGTGGCTTCAGTATCTGCAT +
Preference number: 4 (lower is better)
Translates to: AGRRRCCGDSVVPGAMEAGVGEG*WLQYLH
Trigger: ATGCAGATACTGAAGCCAGCAACCTTCACCGACACC...GGCCTCCATGGCACCAGGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp AGCAAAACTGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCGGCCCCGTCGGCGCCAGCACACTaGGAGCAACAGCGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: SKTAFRIRDTHAMEHPAPSAPAH*EQQRGG
Trigger: GCCGCCGCGCTGTTGCTCGCAGTGTGCTGGCGCCGA...CGGGGCCGGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCAGTTTTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404039.5
CDS-3UTR CCA 90 bp CTTCCGCTTGGTGGCTGGAATCTAGGGGCCGGTGTCCTGTGGGCTCGCGTGGGGCACACAGCGGGCCTGTaGGTGGAGTTGACGCTTTGT +
Preference number: 4 (lower is better)
Translates to: LPLGGWNLGAGVLWARVGHTAGL*VELTLC
Trigger: ACAAAGCGTCAACTCCACCCACAGGCCCGCTGTGTG...CCCCACGCGAGCCCACAGGACACCGGCCCCTAGATTCCAGCCACCAAGCGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp TCTCATGCTTCCGCTTGGTGGCTGGAATCTAGGGGCCGGTGTCCTGTGGGCTCGTGGCGTCGCAGAGGGTaGGGATGGACACGTTCTGCG +
Preference number: 4 (lower is better)
Translates to: SHASAWWLESRGRCPVGSWRRRG*GWTRSA
Trigger: CGCAGAACGTGTCCATCCTCACCCTCTGCGACGCCA...CGAGCCCACAGGACACCGGCCCCTAGATTCCAGCCACCAAGCGGAAGCATGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GCTAGTGTGGGCGGGTCTCATGCTTCCGCTTGGTGGCTGGAATCTAGGGGCCGGCGTAGGCTAGGATCTTaGTCACGTCCCAGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: ASVGGSHASAWWLESRGRRRLGS*SRPSPR
Trigger: CCGGGGACTGGGACGTGACCAAGATCCTAGCCTACG...CCGGCCCCTAGATTCCAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp AGGACACCCCCGCAGGGCTGGGAGCTGGCGAAGTCAGTCCTGACATTCAGCTTGGGACAGCGTTGTCCCTaGTGCCATGGAGGCCGTGAG +
Preference number: 4 (lower is better)
Translates to: RTPPQGWELAKSVLTFSLGQRCP*CHGGRE
Trigger: CTCACGGCCTCCATGGCACCAGGGACAACGCTGTCC...CAAGCTGAATGTCAGGACTGACTTCGCCAGCTCCCAGCCCTGCGGGGGTGTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GCTAGTGTGGGCGGGTCTCATGCTTCCGCTTGGTGGCTGGAATCTAGGGGCCGGCATGCTTCCGCTTGGTaGCTGGAATCTAGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: ASVGGSHASAWWLESRGRHASAW*LESRGR
Trigger: CCGGCCCCTAGATTCCAGCCACCAAGCGGAAGCATG...CCGGCCCCTAGATTCCAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp AACGGGAACACAGAGGCTAGTGTGGGCGGGTCTCATGCTTCCGCTTGGTGGCTGCTGGCGGGAGGAGGCTaGGTTGACTGCACAGAGGCC +
Preference number: 4 (lower is better)
Translates to: NGNTEASVGGSHASAWWLLAGGG*VDCTEA
Trigger: GGCCTCTGTGCAGTCAACCCAGCCTCCTCCCGCCAG...CAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGCCTCTGTGTTCCCGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp GCGCCGGGAGGAGGCGCTGCTGCGGGGACAGCGTTGTCCCTGGTGCCATGGAGGTTAGCCTCGGGGTCATaGATTTTGAAGTCTTCACTG +
Preference number: 4 (lower is better)
Translates to: APGGGAAAGTALSLVPWRLASGS*ILKSSL
Trigger: CAGTGAAGACTTCAAAATTCATGACCCCGAGGCTAA...CCTCCATGGCACCAGGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp GCCGGGAGGAGGCGCTGCTGCGGGGACAGCGTTGTCCCTGGTGCCATGGAGGCCTTAGCCTCGGGGTCATaGATTTTGAAGTCTTCACTG +
Preference number: 4 (lower is better)
Translates to: AGRRRCCGDSVVPGAMEALASGS*ILKSSL
Trigger: CAGTGAAGACTTCAAAATTCATGACCCCGAGGCTAA...GGCCTCCATGGCACCAGGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp CTTCCGCTTGGTGGCTGGAATCTAGGGGCCGGTGTCCTGTGGGCTCGCGTGGGGCCCACTTCACCATGGTaGTGTAGTACTCCCTCATCC +
Preference number: 4 (lower is better)
Translates to: LPLGGWNLGAGVLWARVGPTSPW*CSTPSS
Trigger: GGATGAGGGAGTACTACATCACCATGGTGAAGTGGG...CCCCACGCGAGCCCACAGGACACCGGCCCCTAGATTCCAGCCACCAAGCGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp TGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCGGCCCCGCCCCGCCCAGCAAAACAACCCCATaGCGGAGACAGTGGAGCATC +
Preference number: 4 (lower is better)
Translates to: CLPHPRHTCYGTPGPAPPSKTTP*RRQWSI
Trigger: GATGCTCCACTGTCTCCGTCATGGGGTTGTTTTGCT...GGGCGGGGCGGGGCCGGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp GCTAGTGTGGGCGGGTCTCATGCTTCCGCTTGGTGGCTGGAATCTAGGGGCCGGTCCGAAGCAGGAAGCTaGCGCTGCTTAGTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: ASVGGSHASAWWLESRGRSEAGS*RCLVGL
Trigger: AAGCCCCACTAAGCAGCGGCAGCTTCCTGCTTCGGA...CCGGCCCCTAGATTCCAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332007.7
CDS-3UTR GCA 90 bp TCTCATGCTTCCGCTTGGTGGCTGGAATCTAGGGGCCGGTGTCCTGTGGGCTCGCGTAGGCGAGTCTCGTaGCATCCGGAGACCACCAGT +
Preference number: 4 (lower is better)
Translates to: SHASAWWLESRGRCPVGSRRRVS*HPETTS
Trigger: ACTGGTGGTCTCCGGATGGCACGAGACTCGCCTACG...CGAGCCCACAGGACACCGGCCCCTAGATTCCAGCCACCAAGCGGAAGCATGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp TCTCATGCTTCCGCTTGGTGGCTGGAATCTAGGGGCCGGTGTCCTGTGGGCTCGAGGATGGACACGTTCTaGGCCCGGTTCAGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: SHASAWWLESRGRCPVGSRMDTF*ARFSQV
Trigger: GACCTGGCTGAACCGGGCGCAGAACGTGTCCATCCT...CGAGCCCACAGGACACCGGCCCCTAGATTCCAGCCACCAAGCGGAAGCATGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp TGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCGGCCCCGCCCCGCCCCTGGGAGGATGTAGGTaGTCAGGTAGCCACCGTAAT +
Preference number: 4 (lower is better)
Translates to: CLPHPRHTCYGTPGPAPPLGGCR*SGSHRN
Trigger: ATTACGGTGGCTACCTGAGCACCTACATCCTCCCAG...GGGCGGGGCGGGGCCGGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp TGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCGGCCCCGCCCCGCCCATGGACCGGTACAGATaGTGTTTGAGGCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: CLPHPRHTCYGTPGPAPPMDRYR*CLRLEL
Trigger: CAGCTCCAGCCTCAAACAGCATCTGTACCGGTCCAT...GGGCGGGGCGGGGCCGGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp CACATCCCCACTTCCCTCCGACCAGATGTCGTGGCCAGAGCTGGCTTCCCCTTCCTGCGTCCATGGCACTaGGACGTGAGACAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: HIPTSLRPDVVARAGFPFLRPWH*DVRQGV
Trigger: CACACCCTGTCTCACGTCGCAGTGCCATGGACGCAG...GAAGGGGAAGCCAGCTCTGGCCACGACATCTGGTCGGAGGGAAGTGGGGATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GCCGGGAGGAGGCGCTGCTGCGGGGACAGCGTTGTCCCTGGTGCCATGGAGGCCATCATCTCCAGATCATaGGTGGGTCCATTTAAGCCA +
Preference number: 4 (lower is better)
Translates to: AGRRRCCGDSVVPGAMEAIISRS*VGPFKP
Trigger: TGGCTTAAATGGACCCACCCATGATCTGGAGATGAT...GGCCTCCATGGCACCAGGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp CTTCCGCTTGGTGGCTGGAATCTAGGGGCCGGTGTCCTGTGGGCTCGCGTGGGGGTCGGTGAAGGTTGCTaGCTTCAGTATCTGCATGGG +
Preference number: 4 (lower is better)
Translates to: LPLGGWNLGAGVLWARVGVGEGC*LQYLHG
Trigger: CCCATGCAGATACTGAAGCCAGCAACCTTCACCGAC...CCCCACGCGAGCCCACAGGACACCGGCCCCTAGATTCCAGCCACCAAGCGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GCGTCCATGGCACTGCGACGTGAGACAGGGTGTGATGTCCCTAACGGGAACACAAGGAGCTTGGTCCCTTaGAAGCCGCTGCCACGGCCG +
Preference number: 4 (lower is better)
Translates to: ASMALRRETGCDVPNGNTRSLVP*KPLPRP
Trigger: CGGCCGTGGCAGCGGCTTCCAAGGGACCAAGCTCCT...TGTGTTCCCGTTAGGGACATCACACCCTGTCTCACGTCGCAGTGCCATGGACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GCCGGGAGGAGGCGCTGCTGCGGGGACAGCGTTGTCCCTGGTGCCATGGAGGCCTTTGAAGTCTGTTATTaGAGAGAGAGCAGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: AGRRRCCGDSVVPGAMEAFEVCY*RESRAA
Trigger: TGCGGCTCTGCTCTCTCTCCAATAACAGACTTCAAA...GGCCTCCATGGCACCAGGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp AACGGGAACACAGAGGCTAGTGTGGGCGGGTCTCATGCTTCCGCTTGGTGGCTGCTTTGCTCTGTTCCTTaGGGGAGGGGCCGTGGCGTG +
Preference number: 4 (lower is better)
Translates to: NGNTEASVGGSHASAWWLLCSVP*GRGRGV
Trigger: CACGCCACGGCCCCTCCCCCAAGGAACAGAGCAAAG...CAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGCCTCTGTGTTCCCGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp CACATCCCCACTTCCCTCCGACCAGATGTCGTGGCCAGAGCTGGCTTCCCCTTCTCCGACCAGATGTCGTaGCCAGAGCTGGCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: HIPTSLRPDVVARAGFPFSDQMS*PELASP
Trigger: AGGGGAAGCCAGCTCTGGCCACGACATCTGGTCGGA...GAAGGGGAAGCCAGCTCTGGCCACGACATCTGGTCGGAGGGAAGTGGGGATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp AGAGGGATGCGCGCAGGCCCACAGAACCCTCAGGACTCCCGTGGCCCGAGCACACGGCAGTGGGATGAATaGTCAGGAACTGCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: RGMRAGPQNPQDSRGPSTRQWDE*SGTAVL
Trigger: AAGAACAGCAGTTCCTGATCATTCATCCCACTGCCG...TGTGCTCGGGCCACGGGAGTCCTGAGGGTTCTGTGGGCCTGCGCGCATCCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp TGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCGGCCCCGCCCCGCCCTCATCGGCAGTGGGATaGATGATCAGGAACTGCTGT +
Preference number: 4 (lower is better)
Translates to: CLPHPRHTCYGTPGPAPPSSAVG*MIRNCC
Trigger: ACAGCAGTTCCTGATCATTCATCCCACTGCCGATGA...GGGCGGGGCGGGGCCGGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp AGAGGGATGCGCGCAGGCCCACAGAACCCTCAGGACTCCCGTGGCCCGAGCACAAGCCCCTCACCATGTTaGACGTCCTCATTACAGGAA +
Preference number: 4 (lower is better)
Translates to: RGMRAGPQNPQDSRGPSTSPSPC*TSSLQE
Trigger: TTCCTGTAATGAGGACGTTCAACATGGTGAGGGGCT...TGTGCTCGGGCCACGGGAGTCCTGAGGGTTCTGTGGGCCTGCGCGCATCCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp TCTCATGCTTCCGCTTGGTGGCTGGAATCTAGGGGCCGGTGTCCTGTGGGCTCGTGGTGCTGTAACTGCTaGGTCCATGGCACTGCGACG +
Preference number: 4 (lower is better)
Translates to: SHASAWWLESRGRCPVGSWCCNC*VHGTAT
Trigger: CGTCGCAGTGCCATGGACGCAGCAGTTACAGCACCA...CGAGCCCACAGGACACCGGCCCCTAGATTCCAGCCACCAAGCGGAAGCATGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp GGTCTCTCGGGCGCCGGGAGGAGGCGCTGCTGCGGGGACAGCGTTGTCCCTGGTCAGTTACTTCCGATCTaGTTCTTCATCAAGCGCAAA +
Preference number: 4 (lower is better)
Translates to: GLSGAGRRRCCGDSVVPGQLLPI*FFIKRK
Trigger: TTTGCGCTTGATGAAGAAGCAGATCGGAAGTAACTG...ACCAGGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGCGCCCGAGAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp GCGTCCATGGCACTGCGACGTGAGACAGGGTGTGATGTCCCTAACGGGAACACAACCTCCGCGCACCCCTaGCCGTGTCTTTACTCAGCG +
Preference number: 4 (lower is better)
Translates to: ASMALRRETGCDVPNGNTTSAHP*PCLYSA
Trigger: CGCTGAGTAAAGACACGGGCAGGGGTGCGCGGAGGT...TGTGTTCCCGTTAGGGACATCACACCCTGTCTCACGTCGCAGTGCCATGGACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404039.5
CDS-3UTR CCA 90 bp AACGGGAACACAGAGGCTAGTGTGGGCGGGTCTCATGCTTCCGCTTGGTGGCTGAGGTCACGGCGACCTTaGTGCTGGTGGCCCACTTCA +
Preference number: 4 (lower is better)
Translates to: NGNTEASVGGSHASAWWLRSRRP*CWWPTS
Trigger: TGAAGTGGGCCACCAGCACCAAGGTCGCCGTGACCT...CAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGCCTCTGTGTTCCCGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp CACATCCCCACTTCCCTCCGACCAGATGTCGTGGCCAGAGCTGGCTTCCCCTTCCACACAGCGGGCCTGTaGGTGGAGTTGACGCTTTGT +
Preference number: 4 (lower is better)
Translates to: HIPTSLRPDVVARAGFPFHTAGL*VELTLC
Trigger: ACAAAGCGTCAACTCCACCCACAGGCCCGCTGTGTG...GAAGGGGAAGCCAGCTCTGGCCACGACATCTGGTCGGAGGGAAGTGGGGATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GAGGGAGGGCAGGGAAATCCCTCGGTTGCATCTGGTTGTAGAAAGAGCCACGTTCCCTCAGGACTCCCGTaGCCCGAGCACACACAGCGG +
Preference number: 4 (lower is better)
Translates to: EGGQGNPSVASGCRKSHVPSGLP*PEHTQR
Trigger: CCGCTGTGTGTGCTCGGGCCACGGGAGTCCTGAGGG...AACGTGGCTCTTTCTACAACCAGATGCAACCGAGGGATTTCCCTGCCCTCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp CGACGTGAGACAGGGTGTGATGTCCCTAACGGGAACACAGAGGCTAGTGTGGGCCCCAGTCCCCGGAGGTaGTGGACTGGATGTTGTCGT +
Preference number: 4 (lower is better)
Translates to: RRETGCDVPNGNTEASVGPSPRR*WTGCCR
Trigger: ACGACAACATCCAGTCCATCACCTCCGGGGACTGGG...GCCCACACTAGCCTCTGTGTTCCCGTTAGGGACATCACACCCTGTCTCACGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp AACGGGAACACAGAGGCTAGTGTGGGCGGGTCTCATGCTTCCGCTTGGTGGCTGAGAGGCACTGCCTGTTaGAGTTGCCCACCGTGTTGG +
Preference number: 4 (lower is better)
Translates to: NGNTEASVGGSHASAWWLRGTAC*SCPPCW
Trigger: CCAACACGGTGGGCAACTTCAACAGGCAGTGCCTCT...CAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGCCTCTGTGTTCCCGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp GCCGGGAGGAGGCGCTGCTGCGGGGACAGCGTTGTCCCTGGTGCCATGGAGGCCTTTCACAAATGGTGGTaGATCACCTTTAAAACACCC +
Preference number: 4 (lower is better)
Translates to: AGRRRCCGDSVVPGAMEAFHKWW*ITFKTP
Trigger: GGGTGTTTTAAAGGTGATTCACCACCATTTGTGAAA...GGCCTCCATGGCACCAGGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp AGCAAAACTGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCGGCCCCGTCACGGCGACCTTGGTaGTGGTGGCCCACTTCACCA +
Preference number: 4 (lower is better)
Translates to: SKTAFRIRDTHAMEHPAPSRRPW*WWPTSP
Trigger: TGGTGAAGTGGGCCACCAGCACCAAGGTCGCCGTGA...CGGGGCCGGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCAGTTTTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp CCTCAGTGTTTAGGAACGTCCCCAAGACGTCTGAAGACAACCTTGAGGAGGGAGCCACCGCGCCGTGGCTaGTCACCATCACCGTCTCCC +
Preference number: 4 (lower is better)
Translates to: PQCLGTSPRRLKTTLRREPPRRG*SPSPSP
Trigger: GGGAGACGGTGATGGTGAGCAGCCACGGCGCGGTGG...CTCCCTCCTCAAGGTTGTCTTCAGACGTCTTGGGGACGTTCCTAAACACTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp TCCCCAAGACGTCTGAAGACAACCTTGAGGAGGGAGCAGTTACTTCCGATCTGCGGGAGGAGGCGCTGCTaGGGGGACAGCGTTGTCCCT +
Preference number: 4 (lower is better)
Translates to: SPRRLKTTLRREQLLPICGRRRC*GDSVVP
Trigger: AGGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCC...GCAGATCGGAAGTAACTGCTCCCTCCTCAAGGTTGTCTTCAGACGTCTTGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp CGACGTGAGACAGGGTGTGATGTCCCTAACGGGAACACAGAGGCTAGTGTGGGCCTGCGTCCATGGCACTaGGACGTGAGACAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: RRETGCDVPNGNTEASVGLRPWH*DVRQGV
Trigger: CACACCCTGTCTCACGTCGCAGTGCCATGGACGCAG...GCCCACACTAGCCTCTGTGTTCCCGTTAGGGACATCACACCCTGTCTCACGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp CTTCCGCTTGGTGGCTGGAATCTAGGGGCCGGTGTCCTGTGGGCTCGCGTGGGGGATGTAAATAGACAGTaGACACCTACAGCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: LPLGGWNLGAGVLWARVGDVNRQ*TPTAKP
Trigger: GGGCTTGGCTGTAGGTGTGCACTGTCTATTTACATC...CCCCACGCGAGCCCACAGGACACCGGCCCCTAGATTCCAGCCACCAAGCGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GAGACAGGGTGTGATGTCCCTAACGGGAACACAGAGGCTAGTGTGGGCGGGTCTTTAGCAACCGGCAAGTaGCGGCTGGGTGCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: ETGCDVPNGNTEASVGGSLATGK*RLGAGR
Trigger: CCTTCCTGCACCCAGCCGCCACTTGCCGGTTGCTAA...AGACCCGCCCACACTAGCCTCTGTGTTCCCGTTAGGGACATCACACCCTGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332007.7
CDS-3UTR CCA 90 bp GAGACAGGGTGTGATGTCCCTAACGGGAACACAGAGGCTAGTGTGGGCGGGTCTGGTCTGACGGCGAGTTaGGAGCCACCAGAGTCCAAG +
Preference number: 4 (lower is better)
Translates to: ETGCDVPNGNTEASVGGSGLTAS*EPPESK
Trigger: CTTGGACTCTGGTGGCTCCCAACTCGCCGTCAGACC...AGACCCGCCCACACTAGCCTCTGTGTTCCCGTTAGGGACATCACACCCTGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332007.7
CDS-3UTR CCA 90 bp GCGTCCATGGCACTGCGACGTGAGACAGGGTGTGATGTCCCTAACGGGAACACACCTTGGCTGTGGTCATaGTCTGTCCAGGCGCTTCCC +
Preference number: 4 (lower is better)
Translates to: ASMALRRETGCDVPNGNTPWLWS*SVQALP
Trigger: GGGAAGCGCCTGGACAGACCATGACCACAGCCAAGG...TGTGTTCCCGTTAGGGACATCACACCCTGTCTCACGTCGCAGTGCCATGGACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332007.7
CDS-3UTR CCA 90 bp AAATGCAACAGGGACGCATCTCCTCTGCTGATGGGATGCCAAGGACACCCCCGCAGGTCACGGCGACCTTaGTGCTGGTGGCCCACTTCA +
Preference number: 4 (lower is better)
Translates to: KCNRDASPLLMGCQGHPRRSRRP*CWWPTS
Trigger: TGAAGTGGGCCACCAGCACCAAGGTCGCCGTGACCT...GCGGGGGTGTCCTTGGCATCCCATCAGCAGAGGAGATGCGTCCCTGTTGCATTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp CGGGGAAGGAGCTTGTTTCCCAAGCAAAACTGCCTTCCGCATCCGAGACACACAACCACCACCGCGCCGTaGCTGCTCACCATCACCGTC +
Preference number: 4 (lower is better)
Translates to: RGRSLFPKQNCLPHPRHTTTTAP*LLTITV
Trigger: GACGGTGATGGTGAGCAGCCACGGCGCGGTGGTGGT...TGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGGGAAACAAGCTCCTTCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp AGTGCACACCTACAGCCAAGCCCTAGCATAGCTGAGTGGGAGAGAGGTTTTATTTTGGGGGAGGGGCCGTaGCGTGCCGGTCTCTCGGGC +
Preference number: 4 (lower is better)
Translates to: SAHLQPSPSIAEWERGFILGEGP*RAGLSG
Trigger: GCCCGAGAGACCGGCACGCCACGGCCCCTCCCCCAA...AATAAAACCTCTCTCCCACTCAGCTATGCTAGGGCTTGGCTGTAGGTGTGCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp AACACAGAGGCTAGTGTGGGCGGGTCTCATGCTTCCGCTTGGTGGCTGGAATCTCTTTGCTCTGTTCCTTaGGGGAGGGGCCGTGGCGTG +
Preference number: 4 (lower is better)
Translates to: NTEASVGGSHASAWWLESLCSVP*GRGRGV
Trigger: CACGCCACGGCCCCTCCCCCAAGGAACAGAGCAAAG...AGATTCCAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGCCTCTGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp CGACGTGAGACAGGGTGTGATGTCCCTAACGGGAACACAGAGGCTAGTGTGGGCCTTCCGCTTGGTGGCTaGAATCTAGGGGCCGGTGTC +
Preference number: 4 (lower is better)
Translates to: RRETGCDVPNGNTEASVGLPLGG*NLGAGV
Trigger: GACACCGGCCCCTAGATTCCAGCCACCAAGCGGAAG...GCCCACACTAGCCTCTGTGTTCCCGTTAGGGACATCACACCCTGTCTCACGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp TCTCATGCTTCCGCTTGGTGGCTGGAATCTAGGGGCCGGTGTCCTGTGGGCTCGTCTCATGCTTCCGCTTaGTGGCTGGAATCTAGGGGC +
Preference number: 4 (lower is better)
Translates to: SHASAWWLESRGRCPVGSSHASA*WLESRG
Trigger: GCCCCTAGATTCCAGCCACCAAGCGGAAGCATGAGA...CGAGCCCACAGGACACCGGCCCCTAGATTCCAGCCACCAAGCGGAAGCATGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GGGCCTGATGACAGCGTGTCTCTCTCCACCAGTGTTGAAGGAACAAGCCTGTGCAGGGCTGCAGGTGCATaGCTGCGAAGCCTGGTGCCA +
Preference number: 4 (lower is better)
Translates to: GPDDSVSLSTSVEGTSLCRAAGA*LRSLVP
Trigger: TGGCACCAGGCTTCGCAGCCATGCACCTGCAGCCCT...GCACAGGCTTGTTCCTTCAACACTGGTGGAGAGAGACACGCTGTCATCAGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
3UTR CAA 72 bp CGAGGGTCCATTGCTGCATCTCTGAGAACAGGCCATTaGAACCAGTGGAGGGTCCCTCCCTCCCTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: RGSIAASLRTGH*NQWRVPPSLLW
Trigger: CCAGAGGAGGGAGGGAGGGACCCTCCACTGGTTCAAATGGCCTGTTCTCAGAGATGCAGCAATGGACCCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS-3UTR TCA 90 bp CCAAGCAAAACTGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCGGCCGGACACGGGAATCATTaGTGGCGGCGTAGGCGAGTC +
Preference number: 4 (lower is better)
Translates to: PSKTAFRIRDTHAMEHPAGHGNH*WRRRRV
Trigger: GACTCGCCTACGCCGCCATCAATGATTCCCGTGTCC...GGCCGGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp CCTCAGTGTTTAGGAACGTCCCCAAGACGTCTGAAGACAACCTTGAGGAGGGAGCAAGTGGCGGCTGGGTaGAGGAAGGGGACCCGAGTG +
Preference number: 4 (lower is better)
Translates to: PQCLGTSPRRLKTTLRREQVAAG*RKGTRV
Trigger: CACTCGGGTCCCCTTCCTGCACCCAGCCGCCACTTG...CTCCCTCCTCAAGGTTGTCTTCAGACGTCTTGGGGACGTTCCTAAACACTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332007.7
CDS-3UTR GCA 90 bp TGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCGGCCCCGCCCCGCCCCCCCATGAGGAATTTTaGTCAGGACGTAATATCCAG +
Preference number: 4 (lower is better)
Translates to: CLPHPRHTCYGTPGPAPPPHEEF*SGRNIQ
Trigger: CTGGATATTACGTCCTGAGCAAAATTCCTCATGGGG...GGGCGGGGCGGGGCCGGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCA
59% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp CTGCGTCCATGGCACTGCGACGTGAGACAGGGTGTGATGTCCCTAACGGGAACACATCCGAGACACACATaGTATGGAACACCCGGCCCC +
Preference number: 4 (lower is better)
Translates to: LRPWHCDVRQGVMSLTGTHPRHT*YGTPGP
Trigger: GGGGCCGGGTGTTCCATAGCATGTGTGTCTCGGATG...TGTTCCCGTTAGGGACATCACACCCTGTCTCACGTCGCAGTGCCATGGACGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp AACGGGAACACAGAGGCTAGTGTGGGCGGGTCTCATGCTTCCGCTTGGTGGCTGCAATGGTGCTGTAACTaGTGCGTCCATGGCACTGCG +
Preference number: 4 (lower is better)
Translates to: NGNTEASVGGSHASAWWLQWCCN*CVHGTA
Trigger: CGCAGTGCCATGGACGCAGCAGTTACAGCACCATTG...CAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGCCTCTGTGTTCCCGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp CGGATCGGTCCTGTTTATCAGCACGTTGGTCCTTTCACAAATGGTGGTGAATCATCCTCCAGCAGGCGGTaGGGGGTGCAGCGGTCGCCG +
Preference number: 4 (lower is better)
Translates to: RIGPVYQHVGPFTNGGESSSSRR*GVQRSP
Trigger: CGGCGACCGCTGCACCCCGCACCGCCTGCTGGAGGA...TGATTCACCACCATTTGTGAAAGGACCAACGTGCTGATAAACAGGACCGATCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404039.5
CDS-3UTR CCA 90 bp CCAAGCAAAACTGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCGGCCGGTAGGGCTTCACGGTaGGGTAGATGGAGCCGGTGT +
Preference number: 4 (lower is better)
Translates to: PSKTAFRIRDTHAMEHPAGRASR*GRWSRC
Trigger: ACACCGGCTCCATCTACCCCACCGTGAAGCCCTACC...GGCCGGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp AGAGGGATGCGCGCAGGCCCACAGAACCCTCAGGACTCCCGTGGCCCGAGCACAATCATCTCCAGATCATaGGTGGGTCCATTTAAGCCA +
Preference number: 4 (lower is better)
Translates to: RGMRAGPQNPQDSRGPSTIISRS*VGPFKP
Trigger: TGGCTTAAATGGACCCACCCATGATCTGGAGATGAT...TGTGCTCGGGCCACGGGAGTCCTGAGGGTTCTGTGGGCCTGCGCGCATCCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp TCTCATGCTTCCGCTTGGTGGCTGGAATCTAGGGGCCGGTGTCCTGTGGGCTCGGTACTCCCTCATCCGTaGATCATCAGGCGGCATCAT +
Preference number: 4 (lower is better)
Translates to: SHASAWWLESRGRCPVGSVLPHP*IIRRHH
Trigger: ATGATGCCGCCTGATGATCCACGGATGAGGGAGTAC...CGAGCCCACAGGACACCGGCCCCTAGATTCCAGCCACCAAGCGGAAGCATGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp CACATCCCCACTTCCCTCCGACCAGATGTCGTGGCCAGAGCTGGCTTCCCCTTCGTCGGTGAAGGTTGCTaGCTTCAGTATCTGCATGGG +
Preference number: 4 (lower is better)
Translates to: HIPTSLRPDVVARAGFPFVGEGC*LQYLHG
Trigger: CCCATGCAGATACTGAAGCCAGCAACCTTCACCGAC...GAAGGGGAAGCCAGCTCTGGCCACGACATCTGGTCGGAGGGAAGTGGGGATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GGGGGTGTATCTTACAAGGCTAACGTAGCACATCATCAACCTCCTGCTCGTGGCAGGAGCTTGGTCCCTTaGAAGCCGCTGCCACGGCCG +
Preference number: 4 (lower is better)
Translates to: GGVSYKANVAHHQPPARGRSLVP*KPLPRP
Trigger: CGGCCGTGGCAGCGGCTTCCAAGGGACCAAGCTCCT...GCCACGAGCAGGAGGTTGATGATGTGCTACGTTAGCCTTGTAAGATACACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp TTCCGATCTGCTTCTTCATCAAGCGCAAAGTCTACACGTGGACTGGAGAAAGGATTGGGGGAGGGGCCGTaGCGTGCCGGTCTCTCGGGC +
Preference number: 4 (lower is better)
Translates to: FRSASSSSAKSTRGLEKGLGEGP*RAGLSG
Trigger: GCCCGAGAGACCGGCACGCCACGGCCCCTCCCCCAA...TCCTTTCTCCAGTCCACGTGTAGACTTTGCGCTTGATGAAGAAGCAGATCGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp AACGGGAACACAGAGGCTAGTGTGGGCGGGTCTCATGCTTCCGCTTGGTGGCTGTCTCATGCTTCCGCTTaGTGGCTGGAATCTAGGGGC +
Preference number: 4 (lower is better)
Translates to: NGNTEASVGGSHASAWWLSHASA*WLESRG
Trigger: GCCCCTAGATTCCAGCCACCAAGCGGAAGCATGAGA...CAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGCCTCTGTGTTCCCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp TCTCATGCTTCCGCTTGGTGGCTGGAATCTAGGGGCCGGTGTCCTGTGGGCTCGCGGCTGCACATTTGGTaGGGGTGTATCTTACAAGGC +
Preference number: 4 (lower is better)
Translates to: SHASAWWLESRGRCPVGSRLHIW*GCILQG
Trigger: GCCTTGTAAGATACACCCCCACCAAATGTGCAGCCG...CGAGCCCACAGGACACCGGCCCCTAGATTCCAGCCACCAAGCGGAAGCATGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp CCCCCGCAGGGCTGGGAGCTGGCGAAGTCAGTCCTGACATTCAGCTTGTCCACACCTTCCAGACCTAGCTaGCTTTGTAGTCGTTCAGGC +
Preference number: 4 (lower is better)
Translates to: PPQGWELAKSVLTFSLSTPSRPS*LCSRSG
Trigger: GCCTGAACGACTACAAAGCCAGCTAGGTCTGGAAGG...TGTGGACAAGCTGAATGTCAGGACTGACTTCGCCAGCTCCCAGCCCTGCGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GCGTCCATGGCACTGCGACGTGAGACAGGGTGTGATGTCCCTAACGGGAACACATGTCGTGGCCAGAGCTaGCTTCCCCTTCCAGACCTA +
Preference number: 4 (lower is better)
Translates to: ASMALRRETGCDVPNGNTCRGQS*LPLPDL
Trigger: TAGGTCTGGAAGGGGAAGCCAGCTCTGGCCACGACA...TGTGTTCCCGTTAGGGACATCACACCCTGTCTCACGTCGCAGTGCCATGGACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp CGGGGAAGGAGCTTGTTTCCCAAGCAAAACTGCCTTCCGCATCCGAGACACACAGGACACGGGAATCATTaGTGGCGGCGTAGGCGAGTC +
Preference number: 4 (lower is better)
Translates to: RGRSLFPKQNCLPHPRHTGHGNH*WRRRRV
Trigger: GACTCGCCTACGCCGCCATCAATGATTCCCGTGTCC...TGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGGGAAACAAGCTCCTTCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp GGGGGTGTATCTTACAAGGCTAACGTAGCACATCATCAACCTCCTGCTCGTGGCTGGCGTCGCAGAGGGTaGGGATGGACACGTTCTGCG +
Preference number: 4 (lower is better)
Translates to: GGVSYKANVAHHQPPARGWRRRG*GWTRSA
Trigger: CGCAGAACGTGTCCATCCTCACCCTCTGCGACGCCA...GCCACGAGCAGGAGGTTGATGATGTGCTACGTTAGCCTTGTAAGATACACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp CGGGGAAGGAGCTTGTTTCCCAAGCAAAACTGCCTTCCGCATCCGAGACACACACCCAGTCCCCGGAGGTaGTGGACTGGATGTTGTCGT +
Preference number: 4 (lower is better)
Translates to: RGRSLFPKQNCLPHPRHTPSPRR*WTGCCR
Trigger: ACGACAACATCCAGTCCATCACCTCCGGGGACTGGG...TGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGGGAAACAAGCTCCTTCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp CTTCCGCTTGGTGGCTGGAATCTAGGGGCCGGTGTCCTGTGGGCTCGCGTGGGGCAGAGGCATAGAGTTTaGAGTCTGTTATTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: LPLGGWNLGAGVLWARVGQRHRV*SLLLER
Trigger: TCTCTCCAATAACAGACTTCAAACTCTATGCCTCTG...CCCCACGCGAGCCCACAGGACACCGGCCCCTAGATTCCAGCCACCAAGCGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp TGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCGGCCCCGCCCCGCCCTTTAGGGCCCCATCCTaGATACTGAAGTTTTGCATT +
Preference number: 4 (lower is better)
Translates to: CLPHPRHTCYGTPGPAPPFRAPS*ILKFCI
Trigger: AATGCAAAACTTCAGTATGCAGGATGGGGCCCTAAA...GGGCGGGGCGGGGCCGGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp CGGGGAAGGAGCTTGTTTCCCAAGCAAAACTGCCTTCCGCATCCGAGACACACACGTAGGCGAGTCTCGTaGCATCCGGAGACCACCAGT +
Preference number: 4 (lower is better)
Translates to: RGRSLFPKQNCLPHPRHTRRRVS*HPETTS
Trigger: ACTGGTGGTCTCCGGATGGCACGAGACTCGCCTACG...TGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGGGAAACAAGCTCCTTCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp TCCCCAAGACGTCTGAAGACAACCTTGAGGAGGGAGCAGTTACTTCCGATCTGCTCTGGCTGCCTGGGGTaGCATCCACCACCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: SPRRLKTTLRREQLLPICSGCLG*HPPPGA
Trigger: TGCTCCTGGTGGTGGATGGCACCCCAGGCAGCCAGA...GCAGATCGGAAGTAACTGCTCCCTCCTCAAGGTTGTCTTCAGACGTCTTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp AGTGCACACCTACAGCCAAGCCCTAGCATAGCTGAGTGGGAGAGAGGTTTTATTCCACCGCGCCGTGGCTaGTCACCATCACCGTCTCCC +
Preference number: 4 (lower is better)
Translates to: SAHLQPSPSIAEWERGFIPPRRG*SPSPSP
Trigger: GGGAGACGGTGATGGTGAGCAGCCACGGCGCGGTGG...AATAAAACCTCTCTCCCACTCAGCTATGCTAGGGCTTGGCTGTAGGTGTGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp TTCCCAAGCAAAACTGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCGCGCCGCCTCACTTCGTaGAGGAGCTTGGTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: FPSKTAFRIRDTHAMEHPRRLTS*RSLVPW
Trigger: CCAAGGGACCAAGCTCCTGCACGAAGTGAGGCGGCG...CGGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp AGGGAGGGCAGGGAAATCCCTCGGTTGCATCTGGTTGTAGAAAGAGCCACGTTTCGCCGCCTCACTTCGTaGAGGAGCTTGGTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: REGREIPRLHLVVERATFRRLTS*RSLVPW
Trigger: CCAAGGGACCAAGCTCCTGCACGAAGTGAGGCGGCG...AAACGTGGCTCTTTCTACAACCAGATGCAACCGAGGGATTTCCCTGCCCTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp AACGGGAACACAGAGGCTAGTGTGGGCGGGTCTCATGCTTCCGCTTGGTGGCTGCTGGGAGGATGTAGGTaGTCAGGTAGCCACCGTAAT +
Preference number: 4 (lower is better)
Translates to: NGNTEASVGGSHASAWWLLGGCR*SGSHRN
Trigger: ATTACGGTGGCTACCTGAGCACCTACATCCTCCCAG...CAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGCCTCTGTGTTCCCGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp TCTCATGCTTCCGCTTGGTGGCTGGAATCTAGGGGCCGGTGTCCTGTGGGCTCGTTTCCCAAGCAAAACTaGCTTCCGCATCCGAGACAC +
Preference number: 4 (lower is better)
Translates to: SHASAWWLESRGRCPVGSFPKQN*LPHPRH
Trigger: GTGTCTCGGATGCGGAAGGCAGTTTTGCTTGGGAAA...CGAGCCCACAGGACACCGGCCCCTAGATTCCAGCCACCAAGCGGAAGCATGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp AGGGAGGGCAGGGAAATCCCTCGGTTGCATCTGGTTGTAGAAAGAGCCACGTTTCCTCTGCTGATGGGATaGCAAGGACACCCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: REGREIPRLHLVVERATFPLLMG*QGHPRR
Trigger: CCTGCGGGGGTGTCCTTGGCATCCCATCAGCAGAGG...AAACGTGGCTCTTTCTACAACCAGATGCAACCGAGGGATTTCCCTGCCCTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp AGTGCACACCTACAGCCAAGCCCTAGCATAGCTGAGTGGGAGAGAGGTTTTATTCACCACCGGGGCAGGTaGGGTCTGACGGCGAGTTGG +
Preference number: 4 (lower is better)
Translates to: SAHLQPSPSIAEWERGFIHHRGR*GLTASW
Trigger: CCAACTCGCCGTCAGACCCCACCTGCCCCGGTGGTG...AATAAAACCTCTCTCCCACTCAGCTATGCTAGGGCTTGGCTGTAGGTGTGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332007.7
CDS-3UTR CCA 90 bp AGAGGGATGCGCGCAGGCCCACAGAACCCTCAGGACTCCCGTGGCCCGAGCACAACTATTATCTTCCGCTaGTGTCAGAAGTATGACCGA +
Preference number: 4 (lower is better)
Translates to: RGMRAGPQNPQDSRGPSTTIIFR*CQKYDR
Trigger: TCGGTCATACTTCTGACACCAGCGGAAGATAATAGT...TGTGCTCGGGCCACGGGAGTCCTGAGGGTTCTGTGGGCCTGCGCGCATCCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp AGGACACCCCCGCAGGGCTGGGAGCTGGCGAAGTCAGTCCTGACATTCAGCTTGTGCATTGCTGACTTCTaGTGGGTCCAGACTTTGAGG +
Preference number: 4 (lower is better)
Translates to: RTPPQGWELAKSVLTFSLCIADF*WVQTLR
Trigger: CCTCAAAGTCTGGACCCACCAGAAGTCAGCAATGCA...CAAGCTGAATGTCAGGACTGACTTCGCCAGCTCCCAGCCCTGCGGGGGTGTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp CCCCCGCAGGGCTGGGAGCTGGCGAAGTCAGTCCTGACATTCAGCTTGTCCACATCTCACTTCCAGCCTTaGGATAGTGGTAGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: PPQGWELAKSVLTFSLSTSHFQP*DSGRAS
Trigger: TGAAGCCCTACCACTATCCCAAGGCTGGAAGTGAGA...TGTGGACAAGCTGAATGTCAGGACTGACTTCGCCAGCTCCCAGCCCTGCGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp ATGGGTGCTATTGGCTGTCTTCCCCCTCAGTGTTTAGGAACGTCCCCAAGACGTCGGCGACCTTGGTGCTaGTGGCCCACTTCACCATGG +
Preference number: 4 (lower is better)
Translates to: MGAIGCLPPQCLGTSPRRRRPWC*WPTSPW
Trigger: CCATGGTGAAGTGGGCCACCAGCACCAAGGTCGCCG...ACGTCTTGGGGACGTTCCTAAACACTGAGGGGGAAGACAGCCAATAGCACCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp AGAGGGATGCGCGCAGGCCCACAGAACCCTCAGGACTCCCGTGGCCCGAGCACAGCTTCAGTATCTGCATaGGCAGGTTGTAATCATCAA +
Preference number: 4 (lower is better)
Translates to: RGMRAGPQNPQDSRGPSTASVSA*AGCNHQ
Trigger: TTGATGATTACAACCTGCCCATGCAGATACTGAAGC...TGTGCTCGGGCCACGGGAGTCCTGAGGGTTCTGTGGGCCTGCGCGCATCCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp AACGGGAACACAGAGGCTAGTGTGGGCGGGTCTCATGCTTCCGCTTGGTGGCTGGTCGGTGAAGGTTGCTaGCTTCAGTATCTGCATGGG +
Preference number: 4 (lower is better)
Translates to: NGNTEASVGGSHASAWWLVGEGC*LQYLHG
Trigger: CCCATGCAGATACTGAAGCCAGCAACCTTCACCGAC...CAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGCCTCTGTGTTCCCGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp TTCCCAAGCAAAACTGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCGGAGACACACATGCTATaGAACACCCGGCCCCGCCCC +
Preference number: 4 (lower is better)
Translates to: FPSKTAFRIRDTHAMEHPETHML*NTRPRP
Trigger: GGGGCGGGGCCGGGTGTTCCATAGCATGTGTGTCTC...CGGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp TTCCCAAGCAAAACTGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCGGGACAGCGTTGTCCCTaGTGCCATGGAGGCCGTGAG +
Preference number: 4 (lower is better)
Translates to: FPSKTAFRIRDTHAMEHPGQRCP*CHGGRE
Trigger: CTCACGGCCTCCATGGCACCAGGGACAACGCTGTCC...CGGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp TATGAACACGCACTGCTAAAACAATGGTGCTGTAACTGCTGCGTCCATGGCACTTCCTGTGGGCTCGCGTaGGGCCTGCGGCCACCATCC +
Preference number: 4 (lower is better)
Translates to: YEHALLKQWCCNCCVHGTSCGLA*GLRPPS
Trigger: GGATGGTGGCCGCAGGCCCCACGCGAGCCCACAGGA...AGTGCCATGGACGCAGCAGTTACAGCACCATTGTTTTAGCAGTGCGTGTTCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp CGGGGAAGGAGCTTGTTTCCCAAGCAAAACTGCCTTCCGCATCCGAGACACACACATGCTTCCGCTTGGTaGCTGGAATCTAGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: RGRSLFPKQNCLPHPRHTHASAW*LESRGR
Trigger: CCGGCCCCTAGATTCCAGCCACCAAGCGGAAGCATG...TGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGGGAAACAAGCTCCTTCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp CACATCCCCACTTCCCTCCGACCAGATGTCGTGGCCAGAGCTGGCTTCCCCTTCCGCAAAGTCTACACGTaGACTGGAGAAAGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: HIPTSLRPDVVARAGFPFRKVYT*TGERKG
Trigger: CCCTTTCCTTTCTCCAGTCCACGTGTAGACTTTGCG...GAAGGGGAAGCCAGCTCTGGCCACGACATCTGGTCGGAGGGAAGTGGGGATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp TTATCAGTTCAGTATTCACGAGGGTCCATTGCTGCATCTCTGAGAACAGGCCATCTCCGCGCCTGGTACTaGAACCGGGGCCGGCCACCC +
Preference number: 4 (lower is better)
Translates to: LSVQYSRGSIAASLRTGHLRAWY*NRGRPP
Trigger: GGGTGGCCGGCCCCGGTTCCAGTACCAGGCGCGGAG...ATGGCCTGTTCTCAGAGATGCAGCAATGGACCCTCGTGAATACTGAACTGATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS-3UTR CCA 90 bp TTTAATGGGTGCTATTGGCTGTCTTCCCCCTCAGTGTTTAGGAACGTCCCCAAGCCCTCAGGACTCCCGTaGCCCGAGCACACACAGCGG +
Preference number: 4 (lower is better)
Translates to: FNGCYWLSSPSVFRNVPKPSGLP*PEHTQR
Trigger: CCGCTGTGTGTGCTCGGGCCACGGGAGTCCTGAGGG...CTTGGGGACGTTCCTAAACACTGAGGGGGAAGACAGCCAATAGCACCCATTAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GTATCTTACAAGGCTAACGTAGCACATCATCAACCTCCTGCTCGTGGCAGGAAGGAGCCACCCCCACGATaGGAGAGGGATGCGCGCAGG +
Preference number: 4 (lower is better)
Translates to: VSYKANVAHHQPPARGRKEPPPR*ERDARR
Trigger: CCTGCGCGCATCCCTCTCCCATCGTGGGGGTGGCTC...CTTCCTGCCACGAGCAGGAGGTTGATGATGTGCTACGTTAGCCTTGTAAGATAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp TTTCCCAAGCAAAACTGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCACACCCCCGCAGGGCTaGGAGCTGGCGAAGTCAGTC +
Preference number: 4 (lower is better)
Translates to: FPKQNCLPHPRHTCYGTPTPPQG*ELAKSV
Trigger: GACTGACTTCGCCAGCTCCCAGCCCTGCGGGGGTGT...GGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GGGTGCTATTGGCTGTCTTCCCCCTCAGTGTTTAGGAACGTCCCCAAGACGTCTTCCGACCAGATGTCGTaGCCAGAGCTGGCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: GCYWLSSPSVFRNVPKTSSDQMS*PELASP
Trigger: AGGGGAAGCCAGCTCTGGCCACGACATCTGGTCGGA...AGACGTCTTGGGGACGTTCCTAAACACTGAGGGGGAAGACAGCCAATAGCACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
3UTR CAA 72 bp TTGGGCCTGATGACAGCGTGTCTCTCTCCACCAGTGTaGAAGGAACAAGCCTGTGCTGGCAGCAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: LGLMTACLSPPV*KEQACAGSRGC
Trigger: GCAGCCTCTGCTGCCAGCACAGGCTTGTTCCTTCAACACTGGTGGAGAGAGACACGCTGTCATCAGGCCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS-3UTR TCA 90 bp CTTCCGCTTGGTGGCTGGAATCTAGGGGCCGGTGTCCTGTGGGCTCGCGTGGGGGGGTTCCACATTGTATaGAAAAAGTGCATACTCTCT +
Preference number: 4 (lower is better)
Translates to: LPLGGWNLGAGVLWARVGGFHIV*KKCILS
Trigger: AGAGAGTATGCACTTTTTTCATACAATGTGGAACCC...CCCCACGCGAGCCCACAGGACACCGGCCCCTAGATTCCAGCCACCAAGCGGAAG
57% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp TCTCATGCTTCCGCTTGGTGGCTGGAATCTAGGGGCCGGTGTCCTGTGGGCTCGCCCCATCCTGCATACTaGAGTTTTGCATTGCTGACT +
Preference number: 4 (lower is better)
Translates to: SHASAWWLESRGRCPVGSPHPAY*SFALLT
Trigger: AGTCAGCAATGCAAAACTTCAGTATGCAGGATGGGG...CGAGCCCACAGGACACCGGCCCCTAGATTCCAGCCACCAAGCGGAAGCATGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp GAGACAGGGTGTGATGTCCCTAACGGGAACACAGAGGCTAGTGTGGGCGGGTCTAAGTTGGGAGCTCCATaGTGGGGACACGGGAATCAT +
Preference number: 4 (lower is better)
Translates to: ETGCDVPNGNTEASVGGSKLGAP*WGHGNH
Trigger: ATGATTCCCGTGTCCCCATCATGGAGCTCCCAACTT...AGACCCGCCCACACTAGCCTCTGTGTTCCCGTTAGGGACATCACACCCTGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp AGCAAAACTGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCGGCCCCGCCCACTTCACCATGGTaGTGTAGTACTCCCTCATCC +
Preference number: 4 (lower is better)
Translates to: SKTAFRIRDTHAMEHPAPPTSPW*CSTPSS
Trigger: GGATGAGGGAGTACTACATCACCATGGTGAAGTGGG...CGGGGCCGGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCAGTTTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp GCGTCCATGGCACTGCGACGTGAGACAGGGTGTGATGTCCCTAACGGGAACACAGAGCAGAGCCGCAGGTaGATGTCTGGCCTTGATTTT +
Preference number: 4 (lower is better)
Translates to: ASMALRRETGCDVPNGNTEQSRR*MSGLDF
Trigger: AAAATCAAGGCCAGACATTCACCTGCGGCTCTGCTC...TGTGTTCCCGTTAGGGACATCACACCCTGTCTCACGTCGCAGTGCCATGGACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp TTTAATGGGTGCTATTGGCTGTCTTCCCCCTCAGTGTTTAGGAACGTCCCCAAGGTGCCATGGAGGCCGTaGGTGATGACCCCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: FNGCYWLSSPSVFRNVPKVPWRP*VMTPGK
Trigger: CTTCCCCGGGGTCATCACTCACGGCCTCCATGGCAC...CTTGGGGACGTTCCTAAACACTGAGGGGGAAGACAGCCAATAGCACCCATTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp GAGACAGGGTGTGATGTCCCTAACGGGAACACAGAGGCTAGTGTGGGCGGGTCTAGCAAAACAACCCCATaGCGGAGACAGTGGAGCATC +
Preference number: 4 (lower is better)
Translates to: ETGCDVPNGNTEASVGGSSKTTP*RRQWSI
Trigger: GATGCTCCACTGTCTCCGTCATGGGGTTGTTTTGCT...AGACCCGCCCACACTAGCCTCTGTGTTCCCGTTAGGGACATCACACCCTGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp AAACCCAAAGCCCCAAACGCCAAAATGCAACAGGGACGCATCTCCTCTGCTGATGGGAGGAGGCTGGGTTaGCTGCACAGAGGCCTGACA +
Preference number: 4 (lower is better)
Translates to: KPKAPNAKMQQGRISSADGRRLG*LHRGLT
Trigger: TGTCAGGCCTCTGTGCAGTCAACCCAGCCTCCTCCC...ATCAGCAGAGGAGATGCGTCCCTGTTGCATTTTGGCGTTTGGGGCTTTGGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp AACGGGAACACAGAGGCTAGTGTGGGCGGGTCTCATGCTTCCGCTTGGTGGCTGTGGCGAAGTCAGTCCTaGCATTCAGCTTGTCCACAA +
Preference number: 4 (lower is better)
Translates to: NGNTEASVGGSHASAWWLWRSQS*HSACPQ
Trigger: TTGTGGACAAGCTGAATGTCAGGACTGACTTCGCCA...CAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGCCTCTGTGTTCCCGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp AACACAGAGGCTAGTGTGGGCGGGTCTCATGCTTCCGCTTGGTGGCTGGAATCTACTGGATGTTGTCGTTaGTGCTGTTGGGCTGGGACG +
Preference number: 4 (lower is better)
Translates to: NTEASVGGSHASAWWLESTGCCR*CCWAGT
Trigger: CGTCCCAGCCCAACAGCAGCAACGACAACATCCAGT...AGATTCCAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGCCTCTGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp GGTGTATCTTACAAGGCTAACGTAGCACATCATCAACCTCCTGCTCGTGGCAGGTCTGGCTGCCTGGGGTaGCATCCACCACCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: GVSYKANVAHHQPPARGRSGCLG*HPPPGA
Trigger: TGCTCCTGGTGGTGGATGGCACCCCAGGCAGCCAGA...CCTGCCACGAGCAGGAGGTTGATGATGTGCTACGTTAGCCTTGTAAGATACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp GCTAGTGTGGGCGGGTCTCATGCTTCCGCTTGGTGGCTGGAATCTAGGGGCCGGTTGATTTTCTCCCTTTaGTGGGAGGATGTAGGTGCT +
Preference number: 4 (lower is better)
Translates to: ASVGGSHASAWWLESRGRLIFSL*WEDVGA
Trigger: AGCACCTACATCCTCCCAGCAAAGGGAGAAAATCAA...CCGGCCCCTAGATTCCAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp TTCCCAAGCAAAACTGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCGTGTGGGCGGGTCTCATaGTTCCGCTTGGTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: FPSKTAFRIRDTHAMEHPCGRVS*FRLVAG
Trigger: TCCAGCCACCAAGCGGAAGCATGAGACCCGCCCACA...CGGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp GGGGGTGTATCTTACAAGGCTAACGTAGCACATCATCAACCTCCTGCTCGTGGCTGTGGGCGGGTCTCATaGTTCCGCTTGGTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GGVSYKANVAHHQPPARGCGRVS*FRLVAG
Trigger: TCCAGCCACCAAGCGGAAGCATGAGACCCGCCCACA...GCCACGAGCAGGAGGTTGATGATGTGCTACGTTAGCCTTGTAAGATACACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp AGGGAGGGCAGGGAAATCCCTCGGTTGCATCTGGTTGTAGAAAGAGCCACGTTTTGTGGGCGGGTCTCATaGTTCCGCTTGGTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: REGREIPRLHLVVERATFCGRVS*FRLVAG
Trigger: TCCAGCCACCAAGCGGAAGCATGAGACCCGCCCACA...AAACGTGGCTCTTTCTACAACCAGATGCAACCGAGGGATTTCCCTGCCCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GGGTGCTATTGGCTGTCTTCCCCCTCAGTGTTTAGGAACGTCCCCAAGACGTCTTTGGCTCCTTGGCTGTaGTCATGGTCTGTCCAGGCG +
Preference number: 4 (lower is better)
Translates to: GCYWLSSPSVFRNVPKTSLAPWL*SWSVQA
Trigger: CGCCTGGACAGACCATGACCACAGCCAAGGAGCCAA...AGACGTCTTGGGGACGTTCCTAAACACTGAGGGGGAAGACAGCCAATAGCACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332007.7
CDS-3UTR CCA 90 bp CGGGGAAGGAGCTTGTTTCCCAAGCAAAACTGCCTTCCGCATCCGAGACACACAGGAGCCGGTGTAAGTTaGGAGCTCCATGATGGGGAC +
Preference number: 4 (lower is better)
Translates to: RGRSLFPKQNCLPHPRHTGAGVS*ELHDGD
Trigger: GTCCCCATCATGGAGCTCCCAACTTACACCGGCTCC...TGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGGGAAACAAGCTCCTTCCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp AGGGAGGGCAGGGAAATCCCTCGGTTGCATCTGGTTGTAGAAAGAGCCACGTTTGGTAGGGCTTCACGGTaGGGTAGATGGAGCCGGTGT +
Preference number: 4 (lower is better)
Translates to: REGREIPRLHLVVERATFGRASR*GRWSRC
Trigger: ACACCGGCTCCATCTACCCCACCGTGAAGCCCTACC...AAACGTGGCTCTTTCTACAACCAGATGCAACCGAGGGATTTCCCTGCCCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp AAATGCAACAGGGACGCATCTCCTCTGCTGATGGGATGCCAAGGACACCCCCGCCGTGTAGGGAAATGCTaGGGTTCTCACTTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: KCNRDASPLLMGCQGHPRRVGKC*GSHFQP
Trigger: AGGCTGGAAGTGAGAACCCCAGCATTTCCCTACACG...GCGGGGGTGTCCTTGGCATCCCATCAGCAGAGGAGATGCGTCCCTGTTGCATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp CTGCGTCCATGGCACTGCGACGTGAGACAGGGTGTGATGTCCCTAACGGGAACACGTGTAGGGAAATGCTaGGGTTCTCACTTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LRPWHCDVRQGVMSLTGTRVGKC*GSHFQP
Trigger: AGGCTGGAAGTGAGAACCCCAGCATTTCCCTACACG...TGTTCCCGTTAGGGACATCACACCCTGTCTCACGTCGCAGTGCCATGGACGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp TTTCCCAAGCAAAACTGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCCGGCGACCTTGGTGCTaGTGGCCCACTTCACCATGG +
Preference number: 4 (lower is better)
Translates to: FPKQNCLPHPRHTCYGTPRRPWC*WPTSPW
Trigger: CCATGGTGAAGTGGGCCACCAGCACCAAGGTCGCCG...GGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp TTCCCAAGCAAAACTGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCGAGGTCACGGCGACCTTaGTGCTGGTGGCCCACTTCA +
Preference number: 4 (lower is better)
Translates to: FPSKTAFRIRDTHAMEHPRSRRP*CWWPTS
Trigger: TGAAGTGGGCCACCAGCACCAAGGTCGCCGTGACCT...CGGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GAGGGAGGGCAGGGAAATCCCTCGGTTGCATCTGGTTGTAGAAAGAGCCACGTTTTGCTGCTGTTGGGCTaGGACGAGGACACCGTGATG +
Preference number: 4 (lower is better)
Translates to: EGGQGNPSVASGCRKSHVLLLLG*DEDTVM
Trigger: CATCACGGTGTCCTCGTCCCAGCCCAACAGCAGCAA...AACGTGGCTCTTTCTACAACCAGATGCAACCGAGGGATTTCCCTGCCCTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp TTCCCAAGCAAAACTGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCGTGTCGTTGCTGCTGTTaGGCTGGGACGAGGACACCG +
Preference number: 4 (lower is better)
Translates to: FPSKTAFRIRDTHAMEHPCRCCC*AGTRTP
Trigger: CGGTGTCCTCGTCCCAGCCCAACAGCAGCAACGACA...CGGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GCACTCGGATCGGTCCTGTTTATCAGCACGTTGGTCCTTTCACAAATGGTGGTGCACACTCTGGCTGCCTaGGGTGCCATCCACCACCAG +
Preference number: 4 (lower is better)
Translates to: ALGSVLFISTLVLSQMVVHTLAA*GAIHHQ
Trigger: CTGGTGGTGGATGGCACCCCAGGCAGCCAGAGTGTG...CACCACCATTTGTGAAAGGACCAACGTGCTGATAAACAGGACCGATCCGAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp AGGGAGGGCAGGGAAATCCCTCGGTTGCATCTGGTTGTAGAAAGAGCCACGTTTTTCTCAGCCACACTCTaGCTGCCTGGGGTGCCATCC +
Preference number: 4 (lower is better)
Translates to: REGREIPRLHLVVERATFFSATL*LPGVPS
Trigger: GGATGGCACCCCAGGCAGCCAGAGTGTGGCTGAGAA...AAACGTGGCTCTTTCTACAACCAGATGCAACCGAGGGATTTCCCTGCCCTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp CCTCAGTGTTTAGGAACGTCCCCAAGACGTCTGAAGACAACCTTGAGGAGGGAGTTCTCAGCCACACTCTaGCTGCCTGGGGTGCCATCC +
Preference number: 4 (lower is better)
Translates to: PQCLGTSPRRLKTTLRREFSATL*LPGVPS
Trigger: GGATGGCACCCCAGGCAGCCAGAGTGTGGCTGAGAA...CTCCCTCCTCAAGGTTGTCTTCAGACGTCTTGGGGACGTTCCTAAACACTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp TCCCCAAGACGTCTGAAGACAACCTTGAGGAGGGAGCAGTTACTTCCGATCTGCTTCTCAGCCACACTCTaGCTGCCTGGGGTGCCATCC +
Preference number: 4 (lower is better)
Translates to: SPRRLKTTLRREQLLPICFSATL*LPGVPS
Trigger: GGATGGCACCCCAGGCAGCCAGAGTGTGGCTGAGAA...GCAGATCGGAAGTAACTGCTCCCTCCTCAAGGTTGTCTTCAGACGTCTTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GAGGGAGCAGTTACTTCCGATCTGCTTCTTCATCAAGCGCAAAGTCTACACGTGACCACCACCGCGCCGTaGCTGCTCACCATCACCGTC +
Preference number: 4 (lower is better)
Translates to: EGAVTSDLLLHQAQSLHVTTTAP*LLTITV
Trigger: GACGGTGATGGTGAGCAGCCACGGCGCGGTGGTGGT...CACGTGTAGACTTTGCGCTTGATGAAGAAGCAGATCGGAAGTAACTGCTCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp TTCCGATCTGCTTCTTCATCAAGCGCAAAGTCTACACGTGGACTGGAGAAAGGAGAGCCACCCCCACGATaGGAGAGGGATGCGCGCAGG +
Preference number: 4 (lower is better)
Translates to: FRSASSSSAKSTRGLEKGEPPPR*ERDARR
Trigger: CCTGCGCGCATCCCTCTCCCATCGTGGGGGTGGCTC...TCCTTTCTCCAGTCCACGTGTAGACTTTGCGCTTGATGAAGAAGCAGATCGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp AGGGAGCAGTTACTTCCGATCTGCTTCTTCATCAAGCGCAAAGTCTACACGTGGCTGGCGGGAGGAGGCTaGGTTGACTGCACAGAGGCC +
Preference number: 4 (lower is better)
Translates to: REQLLPICFFIKRKVYTWLAGGG*VDCTEA
Trigger: GGCCTCTGTGCAGTCAACCCAGCCTCCTCCCGCCAG...CCACGTGTAGACTTTGCGCTTGATGAAGAAGCAGATCGGAAGTAACTGCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp CCAAGCAAAACTGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCGGCCCCCACTTCACCATGGTaGTGTAGTACTCCCTCATCC +
Preference number: 4 (lower is better)
Translates to: PSKTAFRIRDTHAMEHPAPTSPW*CSTPSS
Trigger: GGATGAGGGAGTACTACATCACCATGGTGAAGTGGG...GGCCGGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp AAATGCAACAGGGACGCATCTCCTCTGCTGATGGGATGCCAAGGACACCCCCGCCGGCAGTGGGATGAATaGTCAGGAACTGCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: KCNRDASPLLMGCQGHPRRQWDE*SGTAVL
Trigger: AAGAACAGCAGTTCCTGATCATTCATCCCACTGCCG...GCGGGGGTGTCCTTGGCATCCCATCAGCAGAGGAGATGCGTCCCTGTTGCATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp GAGACAGGGTGTGATGTCCCTAACGGGAACACAGAGGCTAGTGTGGGCGGGTCTAGCCCCTCACCATGTTaGACGTCCTCATTACAGGAA +
Preference number: 4 (lower is better)
Translates to: ETGCDVPNGNTEASVGGSSPSPC*TSSLQE
Trigger: TTCCTGTAATGAGGACGTTCAACATGGTGAGGGGCT...AGACCCGCCCACACTAGCCTCTGTGTTCCCGTTAGGGACATCACACCCTGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp GCGTCCATGGCACTGCGACGTGAGACAGGGTGTGATGTCCCTAACGGGAACACAGACTGCACAGAGGCCTaGCACACATTGCTTCCTTTA +
Preference number: 4 (lower is better)
Translates to: ASMALRRETGCDVPNGNTDCTEA*HTLLPL
Trigger: TAAAGGAAGCAATGTGTGTCAGGCCTCTGTGCAGTC...TGTGTTCCCGTTAGGGACATCACACCCTGTCTCACGTCGCAGTGCCATGGACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp GAGGGAGCAGTTACTTCCGATCTGCTTCTTCATCAAGCGCAAAGTCTACACGTGGGGAGGAGGCTGGGTTaGCTGCACAGAGGCCTGACA +
Preference number: 4 (lower is better)
Translates to: EGAVTSDLLLHQAQSLHVGRRLG*LHRGLT
Trigger: TGTCAGGCCTCTGTGCAGTCAACCCAGCCTCCTCCC...CACGTGTAGACTTTGCGCTTGATGAAGAAGCAGATCGGAAGTAACTGCTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp AGCAAAACTGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCGGCCCCGTGGCGAAGTCAGTCCTaGCATTCAGCTTGTCCACAA +
Preference number: 4 (lower is better)
Translates to: SKTAFRIRDTHAMEHPAPWRSQS*HSACPQ
Trigger: TTGTGGACAAGCTGAATGTCAGGACTGACTTCGCCA...CGGGGCCGGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCAGTTTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp GGGGGTGTATCTTACAAGGCTAACGTAGCACATCATCAACCTCCTGCTCGTGGCACGCATCTCCTCTGCTaGTGGGATGCCAAGGACACC +
Preference number: 4 (lower is better)
Translates to: GGVSYKANVAHHQPPARGTHLLC*WDAKDT
Trigger: GGTGTCCTTGGCATCCCATCAGCAGAGGAGATGCGT...GCCACGAGCAGGAGGTTGATGATGTGCTACGTTAGCCTTGTAAGATACACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp AGCAAAACTGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCGGCCCCGGTCGTTCAGGCCCATTaGAATAGCAAACGCACAGTC +
Preference number: 4 (lower is better)
Translates to: SKTAFRIRDTHAMEHPAPVVQAH*NSKRTV
Trigger: GACTGTGCGTTTGCTATTTCAATGGGCCTGAACGAC...CGGGGCCGGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCAGTTTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp TCCCCAAGACGTCTGAAGACAACCTTGAGGAGGGAGCAGTTACTTCCGATCTGCACCAGCTCCTGTTCCTaGTGCTGCACGGATTTCCCC +
Preference number: 4 (lower is better)
Translates to: SPRRLKTTLRREQLLPICTSSCS*CCTDFP
Trigger: GGGGAAATCCGTGCAGCAGCAGGAACAGGAGCTGGT...GCAGATCGGAAGTAACTGCTCCCTCCTCAAGGTTGTCTTCAGACGTCTTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332007.7
CDS-3UTR GCA 90 bp AAACCCAAAGCCCCAAACGCCAAAATGCAACAGGGACGCATCTCCTCTGCTGATAGGATGGACACGTTCTaGGCCCGGTTCAGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: KPKAPNAKMQQGRISSADRMDTF*ARFSQV
Trigger: GACCTGGCTGAACCGGGCGCAGAACGTGTCCATCCT...ATCAGCAGAGGAGATGCGTCCCTGTTGCATTTTGGCGTTTGGGGCTTTGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp AAACCCAAAGCCCCAAACGCCAAAATGCAACAGGGACGCATCTCCTCTGCTGATCCTCGTGTTTCTTCGTaGAGACCCCCGTGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: KPKAPNAKMQQGRISSADPRVSS*RPPWWR
Trigger: ACGCCACCACGGGGGTCTGCACGAAGAAACACGAGG...ATCAGCAGAGGAGATGCGTCCCTGTTGCATTTTGGCGTTTGGGGCTTTGGGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp CCTCAGTGTTTAGGAACGTCCCCAAGACGTCTGAAGACAACCTTGAGGAGGGAGTCCCTTGGAAGCCGCTaGCACGGCCGTCACACTTTA +
Preference number: 4 (lower is better)
Translates to: PQCLGTSPRRLKTTLRRESLGSR*HGRHTL
Trigger: TAAAGTGTGACGGCCGTGGCAGCGGCTTCCAAGGGA...CTCCCTCCTCAAGGTTGTCTTCAGACGTCTTGGGGACGTTCCTAAACACTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp AGTGCACACCTACAGCCAAGCCCTAGCATAGCTGAGTGGGAGAGAGGTTTTATTCGCCGCCTCACTTCGTaGAGGAGCTTGGTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: SAHLQPSPSIAEWERGFIRRLTS*RSLVPW
Trigger: CCAAGGGACCAAGCTCCTGCACGAAGTGAGGCGGCG...AATAAAACCTCTCTCCCACTCAGCTATGCTAGGGCTTGGCTGTAGGTGTGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp TCTCATGCTTCCGCTTGGTGGCTGGAATCTAGGGGCCGGTGTCCTGTGGGCTCGCTTGGTCATCTCGTATaGTCTGTTGTCAAGTCCATG +
Preference number: 4 (lower is better)
Translates to: SHASAWWLESRGRCPVGSLGHLV*SVVKSM
Trigger: CATGGACTTGACAACAGAGCATACGAGATGACCAAG...CGAGCCCACAGGACACCGGCCCCTAGATTCCAGCCACCAAGCGGAAGCATGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp CGACGTGAGACAGGGTGTGATGTCCCTAACGGGAACACAGAGGCTAGTGTGGGCTTTCCCAAGCAAAACTaGCTTCCGCATCCGAGACAC +
Preference number: 4 (lower is better)
Translates to: RRETGCDVPNGNTEASVGFPKQN*LPHPRH
Trigger: GTGTCTCGGATGCGGAAGGCAGTTTTGCTTGGGAAA...GCCCACACTAGCCTCTGTGTTCCCGTTAGGGACATCACACCCTGTCTCACGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp AAACCCAAAGCCCCAAACGCCAAAATGCAACAGGGACGCATCTCCTCTGCTGATGCGGCCACCATCCTTTaGTCTGTTCCTTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: KPKAPNAKMQQGRISSADAATIL*SVPWGR
Trigger: CCTCCCCCAAGGAACAGAGCAAAGGATGGTGGCCGC...ATCAGCAGAGGAGATGCGTCCCTGTTGCATTTTGGCGTTTGGGGCTTTGGGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp GCGAAGTCAGTCCTGACATTCAGCTTGTCCACAAGCTCAAAAGGAAATGACAGTGGCTCGCGTGGGGCCTaGGGCCACCATCCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: AKSVLTFSLSTSSKGNDSGSRGA*GHHPLL
Trigger: GAGCAAAGGATGGTGGCCGCAGGCCCCACGCGAGCC...ACTGTCATTTCCTTTTGAGCTTGTGGACAAGCTGAATGTCAGGACTGACTTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp AACACAGAGGCTAGTGTGGGCGGGTCTCATGCTTCCGCTTGGTGGCTGGAATCTACATCATCAACCTCCTaGTCGTGGCAGGAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: NTEASVGGSHASAWWLESTSSTS*SWQEGH
Trigger: GTGACCTTCCTGCCACGAGCAGGAGGTTGATGATGT...AGATTCCAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGCCTCTGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp CAGTATTTCTTGGGCCTGATGACAGCGTGTCTCTCTCCACCAGTGTTGAAGGAACCCGGGGTGAGCAGATaGGATGCCTCACACCTGCCA +
Preference number: 4 (lower is better)
Translates to: QYFLGLMTACLSPPVLKEPGVSR*DASHLP
Trigger: TGGCAGGTGTGAGGCATCGCATCTGCTCACCCCGGG...TTCCTTCAACACTGGTGGAGAGAGACACGCTGTCATCAGGCCCAAGAAATACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS-3UTR CCA 90 bp GCGTCCATGGCACTGCGACGTGAGACAGGGTGTGATGTCCCTAACGGGAACACATGCATTGCTGACTTCTaGTGGGTCCAGACTTTGAGG +
Preference number: 4 (lower is better)
Translates to: ASMALRRETGCDVPNGNTCIADF*WVQTLR
Trigger: CCTCAAAGTCTGGACCCACCAGAAGTCAGCAATGCA...TGTGTTCCCGTTAGGGACATCACACCCTGTCTCACGTCGCAGTGCCATGGACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp AGGGAGGGCAGGGAAATCCCTCGGTTGCATCTGGTTGTAGAAAGAGCCACGTTTCACCTTCCTTGCCAGTaGAGACCACACGGATGGCCT +
Preference number: 4 (lower is better)
Translates to: REGREIPRLHLVVERATFHLPCQ*RPHGWP
Trigger: AGGCCATCCGTGTGGTCTCCACTGGCAAGGAAGGTG...AAACGTGGCTCTTTCTACAACCAGATGCAACCGAGGGATTTCCCTGCCCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GGGGGTGTATCTTACAAGGCTAACGTAGCACATCATCAACCTCCTGCTCGTGGCGGAGCCGGTGTAAGTTaGGAGCTCCATGATGGGGAC +
Preference number: 4 (lower is better)
Translates to: GGVSYKANVAHHQPPARGGAGVS*ELHDGD
Trigger: GTCCCCATCATGGAGCTCCCAACTTACACCGGCTCC...GCCACGAGCAGGAGGTTGATGATGTGCTACGTTAGCCTTGTAAGATACACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp CGGGGAAGGAGCTTGTTTCCCAAGCAAAACTGCCTTCCGCATCCGAGACACACATCACGGTGGGGTAGATaGAGCCGGTGTAAGTTGGGA +
Preference number: 4 (lower is better)
Translates to: RGRSLFPKQNCLPHPRHTSRWGR*SRCKLG
Trigger: TCCCAACTTACACCGGCTCCATCTACCCCACCGTGA...TGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGGGAAACAAGCTCCTTCCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp CCAAGCAAAACTGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCGGCCGTACTCCCTCATCCGTaGATCATCAGGCGGCATCAT +
Preference number: 4 (lower is better)
Translates to: PSKTAFRIRDTHAMEHPAVLPHP*IIRRHH
Trigger: ATGATGCCGCCTGATGATCCACGGATGAGGGAGTAC...GGCCGGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp TCCCCAAGACGTCTGAAGACAACCTTGAGGAGGGAGCAGTTACTTCCGATCTGCTTGCTGCTGTTGGGCTaGGACGAGGACACCGTGATG +
Preference number: 4 (lower is better)
Translates to: SPRRLKTTLRREQLLPICLLLLG*DEDTVM
Trigger: CATCACGGTGTCCTCGTCCCAGCCCAACAGCAGCAA...GCAGATCGGAAGTAACTGCTCCCTCCTCAAGGTTGTCTTCAGACGTCTTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp AAACCCAAAGCCCCAAACGCCAAAATGCAACAGGGACGCATCTCCTCTGCTGATCGTAGGCTAGGATCTTaGTCACGTCCCAGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: KPKAPNAKMQQGRISSADRRLGS*SRPSPR
Trigger: CCGGGGACTGGGACGTGACCAAGATCCTAGCCTACG...ATCAGCAGAGGAGATGCGTCCCTGTTGCATTTTGGCGTTTGGGGCTTTGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp AACGGGAACACAGAGGCTAGTGTGGGCGGGTCTCATGCTTCCGCTTGGTGGCTGAAGAAGTCCATGCTATaGCTGAAGGAAGCGCTGAAG +
Preference number: 4 (lower is better)
Translates to: NGNTEASVGGSHASAWWLKKSML*LKEALK
Trigger: CTTCAGCGCTTCCTTCAGCCATAGCATGGACTTCTT...CAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGCCTCTGTGTTCCCGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp TATGAACACGCACTGCTAAAACAATGGTGCTGTAACTGCTGCGTCCATGGCACTAGGAGCTTGGTCCCTTaGAAGCCGCTGCCACGGCCG +
Preference number: 4 (lower is better)
Translates to: YEHALLKQWCCNCCVHGTRSLVP*KPLPRP
Trigger: CGGCCGTGGCAGCGGCTTCCAAGGGACCAAGCTCCT...AGTGCCATGGACGCAGCAGTTACAGCACCATTGTTTTAGCAGTGCGTGTTCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp ATGGGTGCTATTGGCTGTCTTCCCCCTCAGTGTTTAGGAACGTCCCCAAGACGTAGCGCGGAGACTCGATaGGCTACCTTGGTCATCTCG +
Preference number: 4 (lower is better)
Translates to: MGAIGCLPPQCLGTSPRRSAETR*ATLVIS
Trigger: CGAGATGACCAAGGTAGCCCATCGAGTCTCCGCGCT...ACGTCTTGGGGACGTTCCTAAACACTGAGGGGGAAGACAGCCAATAGCACCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp CGACGTGAGACAGGGTGTGATGTCCCTAACGGGAACACAGAGGCTAGTGTGGGCGTCAGCAGTTTGTCCTaGATCCTGAAGCATTCCACG +
Preference number: 4 (lower is better)
Translates to: RRETGCDVPNGNTEASVGVSSLS*ILKHST
Trigger: CGTGGAATGCTTCAGGATCCAGGACAAACTGCTGAC...GCCCACACTAGCCTCTGTGTTCCCGTTAGGGACATCACACCCTGTCTCACGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GTATCTTACAAGGCTAACGTAGCACATCATCAACCTCCTGCTCGTGGCAGGAAGGGACAGCGTTGTCCCTaGTGCCATGGAGGCCGTGAG +
Preference number: 4 (lower is better)
Translates to: VSYKANVAHHQPPARGRKGQRCP*CHGGRE
Trigger: CTCACGGCCTCCATGGCACCAGGGACAACGCTGTCC...CTTCCTGCCACGAGCAGGAGGTTGATGATGTGCTACGTTAGCCTTGTAAGATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp TTTCCCAAGCAAAACTGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCCATGCTTCCGCTTGGTaGCTGGAATCTAGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: FPKQNCLPHPRHTCYGTPHASAW*LESRGR
Trigger: CCGGCCCCTAGATTCCAGCCACCAAGCGGAAGCATG...GGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp ATGGGTGCTATTGGCTGTCTTCCCCCTCAGTGTTTAGGAACGTCCCCAAGACGTACACAGAGGCTAGTGTaGGCGGGTCTCATGCTTCCG +
Preference number: 4 (lower is better)
Translates to: MGAIGCLPPQCLGTSPRRTQRLV*AGLMLP
Trigger: CGGAAGCATGAGACCCGCCCACACTAGCCTCTGTGT...ACGTCTTGGGGACGTTCCTAAACACTGAGGGGGAAGACAGCCAATAGCACCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp CTGCGTCCATGGCACTGCGACGTGAGACAGGGTGTGATGTCCCTAACGGGAACACACCGGCTGCACATTTaGTGGGGGTGTATCTTACAA +
Preference number: 4 (lower is better)
Translates to: LRPWHCDVRQGVMSLTGTHRLHI*WGCILQ
Trigger: TTGTAAGATACACCCCCACCAAATGTGCAGCCGGTG...TGTTCCCGTTAGGGACATCACACCCTGTCTCACGTCGCAGTGCCATGGACGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp AGCAAAACTGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCGGCCCCGCACCGGCTGCACATTTaGTGGGGGTGTATCTTACAA +
Preference number: 4 (lower is better)
Translates to: SKTAFRIRDTHAMEHPAPHRLHI*WGCILQ
Trigger: TTGTAAGATACACCCCCACCAAATGTGCAGCCGGTG...CGGGGCCGGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCAGTTTTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GAGACAGGGTGTGATGTCCCTAACGGGAACACAGAGGCTAGTGTGGGCGGGTCTTCCGAACCCGACTTCTaGTCCAGGGAAGAGAAACTT +
Preference number: 4 (lower is better)
Translates to: ETGCDVPNGNTEASVGGSSEPDF*SREEKL
Trigger: AAGTTTCTCTTCCCTGGACCAGAAGTCGGGTTCGGA...AGACCCGCCCACACTAGCCTCTGTGTTCCCGTTAGGGACATCACACCCTGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404039.5
CDS-3UTR CCA 90 bp AGTTCAGTATTCACGAGGGTCCATTGCTGCATCTCTGAGAACAGGCCATTTGAACCTCCCTCCCTCCTCTaGGACACTCTGCGGGCACCC +
Preference number: 4 (lower is better)
Translates to: SSVFTRVHCCISENRPFEPPSLL*DTLRAP
Trigger: GGGTGCCCGCAGAGTGTCCCAGAGGAGGGAGGGAGG...TTCAAATGGCCTGTTCTCAGAGATGCAGCAATGGACCCTCGTGAATACTGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
3UTR CAA 72 bp CTCCGAGGGAAGAGGGAGGGCAGGGAAATCCCTCGGTaGCATCTGGTTGTAGAAAGAGCCACGTTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: LRGKREGREIPR*HLVVERATFVL
Trigger: AAGCACAAACGTGGCTCTTTCTACAACCAGATGCAACCGAGGGATTTCCCTGCCCTCCCTCTTCCCTCGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp TATGAACACGCACTGCTAAAACAATGGTGCTGTAACTGCTGCGTCCATGGCACTTGGCGTCGCAGAGGGTaGGGATGGACACGTTCTGCG +
Preference number: 4 (lower is better)
Translates to: YEHALLKQWCCNCCVHGTWRRRG*GWTRSA
Trigger: CGCAGAACGTGTCCATCCTCACCCTCTGCGACGCCA...AGTGCCATGGACGCAGCAGTTACAGCACCATTGTTTTAGCAGTGCGTGTTCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp GCACTCGGATCGGTCCTGTTTATCAGCACGTTGGTCCTTTCACAAATGGTGGTGAGAGGCACTGCCTGTTaGAGTTGCCCACCGTGTTGG +
Preference number: 4 (lower is better)
Translates to: ALGSVLFISTLVLSQMVVRGTAC*SCPPCW
Trigger: CCAACACGGTGGGCAACTTCAACAGGCAGTGCCTCT...CACCACCATTTGTGAAAGGACCAACGTGCTGATAAACAGGACCGATCCGAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp TCTCATGCTTCCGCTTGGTGGCTGGAATCTAGGGGCCGGTGTCCTGTGGGCTCGCAGAGGCATAGAGTTTaGAGTCTGTTATTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: SHASAWWLESRGRCPVGSQRHRV*SLLLER
Trigger: TCTCTCCAATAACAGACTTCAAACTCTATGCCTCTG...CGAGCCCACAGGACACCGGCCCCTAGATTCCAGCCACCAAGCGGAAGCATGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp CCAAGCAAAACTGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCGGCCTCATCGGCAGTGGGATaGATGATCAGGAACTGCTGT +
Preference number: 4 (lower is better)
Translates to: PSKTAFRIRDTHAMEHPASSAVG*MIRNCC
Trigger: ACAGCAGTTCCTGATCATTCATCCCACTGCCGATGA...GGCCGGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp GCGTCCATGGCACTGCGACGTGAGACAGGGTGTGATGTCCCTAACGGGAACACAGTTTGTCCTGGATCCTaGAGCATTCCACGAAGAAGT +
Preference number: 4 (lower is better)
Translates to: ASMALRRETGCDVPNGNTVCPGS*SIPRRS
Trigger: ACTTCTTCGTGGAATGCTTCAGGATCCAGGACAAAC...TGTGTTCCCGTTAGGGACATCACACCCTGTCTCACGTCGCAGTGCCATGGACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp CGGGGAAGGAGCTTGTTTCCCAAGCAAAACTGCCTTCCGCATCCGAGACACACACGTCCTCTTTCGCTGTaGCTGTCAGCAGTTTGTCCT +
Preference number: 4 (lower is better)
Translates to: RGRSLFPKQNCLPHPRHTRPLSL*LSAVCP
Trigger: AGGACAAACTGCTGACAGTCACAGCGAAAGAGGACG...TGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGGGAAACAAGCTCCTTCCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp CCTCAGTGTTTAGGAACGTCCCCAAGACGTCTGAAGACAACCTTGAGGAGGGAGCCTTTCCAATTCCTCTaGGGAGGGTTACTCCCCACC +
Preference number: 4 (lower is better)
Translates to: PQCLGTSPRRLKTTLRREPFQFL*GGLLPT
Trigger: GGTGGGGAGTAACCCTCCGCAGAGGAATTGGAAAGG...CTCCCTCCTCAAGGTTGTCTTCAGACGTCTTGGGGACGTTCCTAAACACTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp TCCCCAAGACGTCTGAAGACAACCTTGAGGAGGGAGCAGTTACTTCCGATCTGCCCTTTCCAATTCCTCTaGGGAGGGTTACTCCCCACC +
Preference number: 4 (lower is better)
Translates to: SPRRLKTTLRREQLLPICPFQFL*GGLLPT
Trigger: GGTGGGGAGTAACCCTCCGCAGAGGAATTGGAAAGG...GCAGATCGGAAGTAACTGCTCCCTCCTCAAGGTTGTCTTCAGACGTCTTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp AAATGCAACAGGGACGCATCTCCTCTGCTGATGGGATGCCAAGGACACCCCCGCCGGAGACCACCAGTGTaGGATGTGTGTCTTCAAAAT +
Preference number: 4 (lower is better)
Translates to: KCNRDASPLLMGCQGHPRRRPPV*DVCLQN
Trigger: ATTTTGAAGACACACATCGCACACTGGTGGTCTCCG...GCGGGGGTGTCCTTGGCATCCCATCAGCAGAGGAGATGCGTCCCTGTTGCATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp AGTGCACACCTACAGCCAAGCCCTAGCATAGCTGAGTGGGAGAGAGGTTTTATTTCACGGCGACCTTGGTaGTGGTGGCCCACTTCACCA +
Preference number: 4 (lower is better)
Translates to: SAHLQPSPSIAEWERGFISRRPW*WWPTSP
Trigger: TGGTGAAGTGGGCCACCAGCACCAAGGTCGCCGTGA...AATAAAACCTCTCTCCCACTCAGCTATGCTAGGGCTTGGCTGTAGGTGTGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp TTTAATGGGTGCTATTGGCTGTCTTCCCCCTCAGTGTTTAGGAACGTCCCCAAGCCTCGTGTTTCTTCGTaGAGACCCCCGTGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: FNGCYWLSSPSVFRNVPKPRVSS*RPPWWR
Trigger: ACGCCACCACGGGGGTCTGCACGAAGAAACACGAGG...CTTGGGGACGTTCCTAAACACTGAGGGGGAAGACAGCCAATAGCACCCATTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp CCCCCGCAGGGCTGGGAGCTGGCGAAGTCAGTCCTGACATTCAGCTTGTCCACATTATCTGTTGTGTTGTaGACCGTCACCATAGGAACA +
Preference number: 4 (lower is better)
Translates to: PPQGWELAKSVLTFSLSTLSVVL*TVTIGT
Trigger: TGTTCCTATGGTGACGGTGCACAACACAACAGATAA...TGTGGACAAGCTGAATGTCAGGACTGACTTCGCCAGCTCCCAGCCCTGCGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp AACACAGAGGCTAGTGTGGGCGGGTCTCATGCTTCCGCTTGGTGGCTGGAATCTGGTGTCGGTGAAGGTTaGTGGCTTCAGTATCTGCAT +
Preference number: 4 (lower is better)
Translates to: NTEASVGGSHASAWWLESGVGEG*WLQYLH
Trigger: ATGCAGATACTGAAGCCAGCAACCTTCACCGACACC...AGATTCCAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGCCTCTGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp TTTCCCAAGCAAAACTGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCTCCCTTGGAAGCCGCTaGCACGGCCGTCACACTTTA +
Preference number: 4 (lower is better)
Translates to: FPKQNCLPHPRHTCYGTPSLGSR*HGRHTL
Trigger: TAAAGTGTGACGGCCGTGGCAGCGGCTTCCAAGGGA...GGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp AGGGAGCAGTTACTTCCGATCTGCTTCTTCATCAAGCGCAAAGTCTACACGTGGGCGGCCACCATCCTTTaGTCTGTTCCTTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: REQLLPICFFIKRKVYTWAATIL*SVPWGR
Trigger: CCTCCCCCAAGGAACAGAGCAAAGGATGGTGGCCGC...CCACGTGTAGACTTTGCGCTTGATGAAGAAGCAGATCGGAAGTAACTGCTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp TTCCGATCTGCTTCTTCATCAAGCGCAAAGTCTACACGTGGACTGGAGAAAGGAACGATGGGAGAGGGATaGGCGCAGGCCCACAGAACC +
Preference number: 4 (lower is better)
Translates to: FRSASSSSAKSTRGLEKGTMGEG*AQAHRT
Trigger: GGTTCTGTGGGCCTGCGCGCATCCCTCTCCCATCGT...TCCTTTCTCCAGTCCACGTGTAGACTTTGCGCTTGATGAAGAAGCAGATCGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp GAGGGAGGGCAGGGAAATCCCTCGGTTGCATCTGGTTGTAGAAAGAGCCACGTTACATCATCAACCTCCTaGTCGTGGCAGGAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: EGGQGNPSVASGCRKSHVTSSTS*SWQEGH
Trigger: GTGACCTTCCTGCCACGAGCAGGAGGTTGATGATGT...AACGTGGCTCTTTCTACAACCAGATGCAACCGAGGGATTTCCCTGCCCTCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp CGGATCGGTCCTGTTTATCAGCACGTTGGTCCTTTCACAAATGGTGGTGAATCAAGAGGCAGCTCTGACTaGGCGCGTGTCCACCGAGCT +
Preference number: 4 (lower is better)
Translates to: RIGPVYQHVGPFTNGGESRGSSD*ARVHRA
Trigger: AGCTCGGTGGACACGCGCGCAGTCAGAGCTGCCTCT...TGATTCACCACCATTTGTGAAAGGACCAACGTGCTGATAAACAGGACCGATCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404039.5
CDS-3UTR GCA 90 bp CTGAAGAAGACACAGTCGGCCAACATCACATTGTCACTCAGAGGAATCATGAGGCCTGAGGGCTGCAGGTaGATGGCTGCGAAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: LKKTQSANITLSLRGIMRPEGCR*MAAKPG
Trigger: ACCAGGCTTCGCAGCCATGCACCTGCAGCCCTCAGG...CCTCATGATTCCTCTGAGTGACAATGTGATGTTGGCCGACTGTGTCTTCTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS-3UTR GCA 90 bp AACATCACATTGTCACTCAGAGGAATCATGAGGGAATCCAGGAGAGCCAGTCTCGTGCTGCCTGAGGGCTaGAGGTGCATGGCTGCGAAG +
Preference number: 4 (lower is better)
Translates to: NITLSLRGIMRESRRASLVLPEG*RCMAAK
Trigger: CTTCGCAGCCATGCACCTGCAGCCCTCAGGCAGCAC...GAGACTGGCTCTCCTGGATTCCCTCATGATTCCTCTGAGTGACAATGTGATGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS-3UTR CCA 90 bp AAATGCAACAGGGACGCATCTCCTCTGCTGATGGGATGCCAAGGACACCCCCGCATTGCTGACTTCTGGTaGGTCCAGACTTTGAGGATC +
Preference number: 4 (lower is better)
Translates to: KCNRDASPLLMGCQGHPRIADFW*VQTLRI
Trigger: GATCCTCAAAGTCTGGACCCACCAGAAGTCAGCAAT...GCGGGGGTGTCCTTGGCATCCCATCAGCAGAGGAGATGCGTCCCTGTTGCATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp TTCCCAAGCAAAACTGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCGTGGAGACCACACGGATaGCCTGTTTCCCGACATGTG +
Preference number: 4 (lower is better)
Translates to: FPSKTAFRIRDTHAMEHPWRPHG*PVSRHV
Trigger: CACATGTCGGGAAACAGGCCATCCGTGTGGTCTCCA...CGGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp CCTCAGTGTTTAGGAACGTCCCCAAGACGTCTGAAGACAACCTTGAGGAGGGAGTCACGGTGGGGTAGATaGAGCCGGTGTAAGTTGGGA +
Preference number: 4 (lower is better)
Translates to: PQCLGTSPRRLKTTLRRESRWGR*SRCKLG
Trigger: TCCCAACTTACACCGGCTCCATCTACCCCACCGTGA...CTCCCTCCTCAAGGTTGTCTTCAGACGTCTTGGGGACGTTCCTAAACACTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp AGCAAAACTGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCGGCCCCGTCTTCATTCTGTCTGTaGAGCCAGGCCTCACTTTCA +
Preference number: 4 (lower is better)
Translates to: SKTAFRIRDTHAMEHPAPSSFCL*SQASLS
Trigger: TGAAAGTGAGGCCTGGCTCCACAGACAGAATGAAGA...CGGGGCCGGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCAGTTTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GTATCTTACAAGGCTAACGTAGCACATCATCAACCTCCTGCTCGTGGCAGGAAGTGTCGTTGCTGCTGTTaGGCTGGGACGAGGACACCG +
Preference number: 4 (lower is better)
Translates to: VSYKANVAHHQPPARGRKCRCCC*AGTRTP
Trigger: CGGTGTCCTCGTCCCAGCCCAACAGCAGCAACGACA...CTTCCTGCCACGAGCAGGAGGTTGATGATGTGCTACGTTAGCCTTGTAAGATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp TTTAATGGGTGCTATTGGCTGTCTTCCCCCTCAGTGTTTAGGAACGTCCCCAAGTGTCGTTGCTGCTGTTaGGCTGGGACGAGGACACCG +
Preference number: 4 (lower is better)
Translates to: FNGCYWLSSPSVFRNVPKCRCCC*AGTRTP
Trigger: CGGTGTCCTCGTCCCAGCCCAACAGCAGCAACGACA...CTTGGGGACGTTCCTAAACACTGAGGGGGAAGACAGCCAATAGCACCCATTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp TTCCCAAGCAAAACTGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCGCCGGAGGTGATGGACTaGATGTTGTCGTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: FPSKTAFRIRDTHAMEHPPEVMD*MLSLLL
Trigger: CAGCAGCAACGACAACATCCAGTCCATCACCTCCGG...CGGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp AGGGAGCAGTTACTTCCGATCTGCTTCTTCATCAAGCGCAAAGTCTACACGTGGCTTCCGCTTGGTGGCTaGAATCTAGGGGCCGGTGTC +
Preference number: 4 (lower is better)
Translates to: REQLLPICFFIKRKVYTWLPLGG*NLGAGV
Trigger: GACACCGGCCCCTAGATTCCAGCCACCAAGCGGAAG...CCACGTGTAGACTTTGCGCTTGATGAAGAAGCAGATCGGAAGTAACTGCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GGGGGTGTATCTTACAAGGCTAACGTAGCACATCATCAACCTCCTGCTCGTGGCTCTCATGCTTCCGCTTaGTGGCTGGAATCTAGGGGC +
Preference number: 4 (lower is better)
Translates to: GGVSYKANVAHHQPPARGSHASA*WLESRG
Trigger: GCCCCTAGATTCCAGCCACCAAGCGGAAGCATGAGA...GCCACGAGCAGGAGGTTGATGATGTGCTACGTTAGCCTTGTAAGATACACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GAGGGAGCAGTTACTTCCGATCTGCTTCTTCATCAAGCGCAAAGTCTACACGTGTCAACCTCCTGCTCGTaGCAGGAAGGTCACGGAGCC +
Preference number: 4 (lower is better)
Translates to: EGAVTSDLLLHQAQSLHVSTSCS*QEGHGA
Trigger: GGCTCCGTGACCTTCCTGCCACGAGCAGGAGGTTGA...CACGTGTAGACTTTGCGCTTGATGAAGAAGCAGATCGGAAGTAACTGCTCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GAGGGAGGGCAGGGAAATCCCTCGGTTGCATCTGGTTGTAGAAAGAGCCACGTTCGGCTGCACATTTGGTaGGGGTGTATCTTACAAGGC +
Preference number: 4 (lower is better)
Translates to: EGGQGNPSVASGCRKSHVRLHIW*GCILQG
Trigger: GCCTTGTAAGATACACCCCCACCAAATGTGCAGCCG...AACGTGGCTCTTTCTACAACCAGATGCAACCGAGGGATTTCCCTGCCCTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GCGAAGTCAGTCCTGACATTCAGCTTGTCCACAAGCTCAAAAGGAAATGACAGTACACCCCCGCAGGGCTaGGAGCTGGCGAAGTCAGTC +
Preference number: 4 (lower is better)
Translates to: AKSVLTFSLSTSSKGNDSTPPQG*ELAKSV
Trigger: GACTGACTTCGCCAGCTCCCAGCCCTGCGGGGGTGT...ACTGTCATTTCCTTTTGAGCTTGTGGACAAGCTGAATGTCAGGACTGACTTCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp CACATCCCCACTTCCCTCCGACCAGATGTCGTGGCCAGAGCTGGCTTCCCCTTCTGTTTATCAGCACGTTaGTCCTTTCACAAATGGTGG +
Preference number: 4 (lower is better)
Translates to: HIPTSLRPDVVARAGFPFCLSAR*SFHKWW
Trigger: CCACCATTTGTGAAAGGACCAACGTGCTGATAAACA...GAAGGGGAAGCCAGCTCTGGCCACGACATCTGGTCGGAGGGAAGTGGGGATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp CAGTATTTCTTGGGCCTGATGACAGCGTGTCTCTCTCCACCAGTGTTGAAGGAACATGGCTGCGAAGCCTaGTGCCATTGGCAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: QYFLGLMTACLSPPVLKEHGCEA*CHWQSC
Trigger: GCAGGACTGCCAATGGCACCAGGCTTCGCAGCCATG...TTCCTTCAACACTGGTGGAGAGAGACACGCTGTCATCAGGCCCAAGAAATACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS-3UTR TCA 90 bp CACATCCCCACTTCCCTCCGACCAGATGTCGTGGCCAGAGCTGGCTTCCCCTTCGTGACCTTCTTCTTTTaGGACAGACTATTATCTTCC +
Preference number: 4 (lower is better)
Translates to: HIPTSLRPDVVARAGFPFVTFFF*DRLLSS
Trigger: GGAAGATAATAGTCTGTCTCAAAAGAAGAAGGTCAC...GAAGGGGAAGCCAGCTCTGGCCACGACATCTGGTCGGAGGGAAGTGGGGATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp ATCTGCTTCTTCATCAAGCGCAAAGTCTACACGTGGACTGGAGAAAGGAAAGGGGGACACGGGAATCATTaGTGGCGGCGTAGGCGAGTC +
Preference number: 4 (lower is better)
Translates to: ICFFIKRKVYTWTGERKGGHGNH*WRRRRV
Trigger: GACTCGCCTACGCCGCCATCAATGATTCCCGTGTCC...CCCTTTCCTTTCTCCAGTCCACGTGTAGACTTTGCGCTTGATGAAGAAGCAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp ATGGGTGCTATTGGCTGTCTTCCCCCTCAGTGTTTAGGAACGTCCCCAAGACGTAAGTTGGGAGCTCCATaGTGGGGACACGGGAATCAT +
Preference number: 4 (lower is better)
Translates to: MGAIGCLPPQCLGTSPRRKLGAP*WGHGNH
Trigger: ATGATTCCCGTGTCCCCATCATGGAGCTCCCAACTT...ACGTCTTGGGGACGTTCCTAAACACTGAGGGGGAAGACAGCCAATAGCACCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp TTCCCAAGCAAAACTGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCGGGGACGAGGACACCGTaGTGTGATAGAATTTCCCTC +
Preference number: 4 (lower is better)
Translates to: FPSKTAFRIRDTHAMEHPGTRTP*CDRISL
Trigger: GAGGGAAATTCTATCACATCACGGTGTCCTCGTCCC...CGGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp CCTCAGTGTTTAGGAACGTCCCCAAGACGTCTGAAGACAACCTTGAGGAGGGAGGAGCAGAGCCGCAGGTaGATGTCTGGCCTTGATTTT +
Preference number: 4 (lower is better)
Translates to: PQCLGTSPRRLKTTLRREEQSRR*MSGLDF
Trigger: AAAATCAAGGCCAGACATTCACCTGCGGCTCTGCTC...CTCCCTCCTCAAGGTTGTCTTCAGACGTCTTGGGGACGTTCCTAAACACTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp GAGGGAGGGCAGGGAAATCCCTCGGTTGCATCTGGTTGTAGAAAGAGCCACGTTTCATCGGCAGTGGGATaGATGATCAGGAACTGCTGT +
Preference number: 4 (lower is better)
Translates to: EGGQGNPSVASGCRKSHVSSAVG*MIRNCC
Trigger: ACAGCAGTTCCTGATCATTCATCCCACTGCCGATGA...AACGTGGCTCTTTCTACAACCAGATGCAACCGAGGGATTTCCCTGCCCTCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp AACACAGAGGCTAGTGTGGGCGGGTCTCATGCTTCCGCTTGGTGGCTGGAATCTGTTTGTCCTGGATCCTaGAGCATTCCACGAAGAAGT +
Preference number: 4 (lower is better)
Translates to: NTEASVGGSHASAWWLESVCPGS*SIPRRS
Trigger: ACTTCTTCGTGGAATGCTTCAGGATCCAGGACAAAC...AGATTCCAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGCCTCTGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp GGGTGCTATTGGCTGTCTTCCCCCTCAGTGTTTAGGAACGTCCCCAAGACGTCTAGCCCCTCACCATGTTaGACGTCCTCATTACAGGAA +
Preference number: 4 (lower is better)
Translates to: GCYWLSSPSVFRNVPKTSSPSPC*TSSLQE
Trigger: TTCCTGTAATGAGGACGTTCAACATGGTGAGGGGCT...AGACGTCTTGGGGACGTTCCTAAACACTGAGGGGGAAGACAGCCAATAGCACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp TCTCATGCTTCCGCTTGGTGGCTGGAATCTAGGGGCCGGTGTCCTGTGGGCTCGTTTCACAAATGGTGGTaGATCACCTTTAAAACACCC +
Preference number: 4 (lower is better)
Translates to: SHASAWWLESRGRCPVGSFHKWW*ITFKTP
Trigger: GGGTGTTTTAAAGGTGATTCACCACCATTTGTGAAA...CGAGCCCACAGGACACCGGCCCCTAGATTCCAGCCACCAAGCGGAAGCATGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp GGCCTGATGACAGCGTGTCTCTCTCCACCAGTGTTGAAGGAACAAGCCTGTGCTGCTGGGCTACAGGCTTaGCTTACTGCTAATGAGTCA +
Preference number: 4 (lower is better)
Translates to: GLMTACLSPPVLKEQACAAGLQA*LTANES
Trigger: TGACTCATTAGCAGTAAGTCAAGCCTGTAGCCCAGC...AGCACAGGCTTGTTCCTTCAACACTGGTGGAGAGAGACACGCTGTCATCAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS-3UTR TCA 90 bp TTTCTTGGGCCTGATGACAGCGTGTCTCTCTCCACCAGTGTTGAAGGAACAAGCCCTGCCACACTCGTATaGCAATGGACAGTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: FLGPDDSVSLSTSVEGTSPATLV*QWTVLP
Trigger: AGGCAGCACTGTCCATTGTCATACGAGTGTGGCAGG...GCTTGTTCCTTCAACACTGGTGGAGAGAGACACGCTGTCATCAGGCCCAAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS-3UTR GCA 90 bp GAGACAGGGTGTGATGTCCCTAACGGGAACACAGAGGCTAGTGTGGGCGGGTCTCCCCATGAGGAATTTTaGTCAGGACGTAATATCCAG +
Preference number: 4 (lower is better)
Translates to: ETGCDVPNGNTEASVGGSPHEEF*SGRNIQ
Trigger: CTGGATATTACGTCCTGAGCAAAATTCCTCATGGGG...AGACCCGCCCACACTAGCCTCTGTGTTCCCGTTAGGGACATCACACCCTGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp AACGGGAACACAGAGGCTAGTGTGGGCGGGTCTCATGCTTCCGCTTGGTGGCTGTTTAGGGCCCCATCCTaGATACTGAAGTTTTGCATT +
Preference number: 4 (lower is better)
Translates to: NGNTEASVGGSHASAWWLFRAPS*ILKFCI
Trigger: AATGCAAAACTTCAGTATGCAGGATGGGGCCCTAAA...CAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGCCTCTGTGTTCCCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp CGGGGAAGGAGCTTGTTTCCCAAGCAAAACTGCCTTCCGCATCCGAGACACACAAAATCACACCTTCCTTaGCAGTGGAGACCACACGGA +
Preference number: 4 (lower is better)
Translates to: RGRSLFPKQNCLPHPRHTKSHLP*QWRPHG
Trigger: TCCGTGTGGTCTCCACTGGCAAGGAAGGTGTGATTT...TGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGGGAAACAAGCTCCTTCCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp ATGGGTGCTATTGGCTGTCTTCCCCCTCAGTGTTTAGGAACGTCCCCAAGACGTGTCCTGTCAATGTACTaGTCCTTCAGCATCGTCCGC +
Preference number: 4 (lower is better)
Translates to: MGAIGCLPPQCLGTSPRRVLSMY*SFSIVR
Trigger: GCGGACGATGCTGAAGGAGCAGTACATTGACAGGAC...ACGTCTTGGGGACGTTCCTAAACACTGAGGGGGAAGACAGCCAATAGCACCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp AGGGAGGGCAGGGAAATCCCTCGGTTGCATCTGGTTGTAGAAAGAGCCACGTTTCTGGGAGGATGTAGGTaGTCAGGTAGCCACCGTAAT +
Preference number: 4 (lower is better)
Translates to: REGREIPRLHLVVERATFLGGCR*SGSHRN
Trigger: ATTACGGTGGCTACCTGAGCACCTACATCCTCCCAG...AAACGTGGCTCTTTCTACAACCAGATGCAACCGAGGGATTTCCCTGCCCTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp AGGGAGCAGTTACTTCCGATCTGCTTCTTCATCAAGCGCAAAGTCTACACGTGGCATCCGAGACACACATaGTATGGAACACCCGGCCCC +
Preference number: 4 (lower is better)
Translates to: REQLLPICFFIKRKVYTWHPRHT*YGTPGP
Trigger: GGGGCCGGGTGTTCCATAGCATGTGTGTCTCGGATG...CCACGTGTAGACTTTGCGCTTGATGAAGAAGCAGATCGGAAGTAACTGCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp GAGGGAGGGCAGGGAAATCCCTCGGTTGCATCTGGTTGTAGAAAGAGCCACGTTTTTCCCAAGCAAAACTaGCTTCCGCATCCGAGACAC +
Preference number: 4 (lower is better)
Translates to: EGGQGNPSVASGCRKSHVFPKQN*LPHPRH
Trigger: GTGTCTCGGATGCGGAAGGCAGTTTTGCTTGGGAAA...AACGTGGCTCTTTCTACAACCAGATGCAACCGAGGGATTTCCCTGCCCTCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp TATGAACACGCACTGCTAAAACAATGGTGCTGTAACTGCTGCGTCCATGGCACTGCGGCCACCATCCTTTaGTCTGTTCCTTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: YEHALLKQWCCNCCVHGTAATIL*SVPWGR
Trigger: CCTCCCCCAAGGAACAGAGCAAAGGATGGTGGCCGC...AGTGCCATGGACGCAGCAGTTACAGCACCATTGTTTTAGCAGTGCGTGTTCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp AGTGCACACCTACAGCCAAGCCCTAGCATAGCTGAGTGGGAGAGAGGTTTTATTTGGTGCTGTAACTGCTaGGTCCATGGCACTGCGACG +
Preference number: 4 (lower is better)
Translates to: SAHLQPSPSIAEWERGFIWCCNC*VHGTAT
Trigger: CGTCGCAGTGCCATGGACGCAGCAGTTACAGCACCA...AATAAAACCTCTCTCCCACTCAGCTATGCTAGGGCTTGGCTGTAGGTGTGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp CGACGTGAGACAGGGTGTGATGTCCCTAACGGGAACACAGAGGCTAGTGTGGGCCTGCTAAAACAATGGTaGTGTAACTGCTGCGTCCAT +
Preference number: 4 (lower is better)
Translates to: RRETGCDVPNGNTEASVGLLKQW*CNCCVH
Trigger: ATGGACGCAGCAGTTACAGCACCATTGTTTTAGCAG...GCCCACACTAGCCTCTGTGTTCCCGTTAGGGACATCACACCCTGTCTCACGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp GTTCAGTATTCACGAGGGTCCATTGCTGCATCTCTGAGAACAGGCCATTTGAACCTCCTGGGACTCTCCTaGAATCCTCCAGCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: VQYSRGSIAASLRTGHLNLLGLS*NPPARV
Trigger: GACCCTGGCTGGAGGATTGCAGGAGAGTCCCAGGAG...GTTCAAATGGCCTGTTCTCAGAGATGCAGCAATGGACCCTCGTGAATACTGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS-3UTR CCA 90 bp TTTCCCAAGCAAAACTGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCTGGAGACCACACGGATaGCCTGTTTCCCGACATGTG +
Preference number: 4 (lower is better)
Translates to: FPKQNCLPHPRHTCYGTPWRPHG*PVSRHV
Trigger: CACATGTCGGGAAACAGGCCATCCGTGTGGTCTCCA...GGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp CTGCGTCCATGGCACTGCGACGTGAGACAGGGTGTGATGTCCCTAACGGGAACAATCATCTCCAGATCATaGGTGGGTCCATTTAAGCCA +
Preference number: 4 (lower is better)
Translates to: LRPWHCDVRQGVMSLTGTIISRS*VGPFKP
Trigger: TGGCTTAAATGGACCCACCCATGATCTGGAGATGAT...TGTTCCCGTTAGGGACATCACACCCTGTCTCACGTCGCAGTGCCATGGACGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp AGGGAGGGCAGGGAAATCCCTCGGTTGCATCTGGTTGTAGAAAGAGCCACGTTTGTACTCCCTCATCCGTaGATCATCAGGCGGCATCAT +
Preference number: 4 (lower is better)
Translates to: REGREIPRLHLVVERATFVLPHP*IIRRHH
Trigger: ATGATGCCGCCTGATGATCCACGGATGAGGGAGTAC...AAACGTGGCTCTTTCTACAACCAGATGCAACCGAGGGATTTCCCTGCCCTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp CCAAGCAAAACTGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCGGCCTCTTCATTCTGTCTGTaGAGCCAGGCCTCACTTTCA +
Preference number: 4 (lower is better)
Translates to: PSKTAFRIRDTHAMEHPASSFCL*SQASLS
Trigger: TGAAAGTGAGGCCTGGCTCCACAGACAGAATGAAGA...GGCCGGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp TCCCCAAGACGTCTGAAGACAACCTTGAGGAGGGAGCAGTTACTTCCGATCTGCCTGTTGTCAAGTCCATaGAGGCCCAAGTACCTCTCG +
Preference number: 4 (lower is better)
Translates to: SPRRLKTTLRREQLLPICLLSSP*RPKYLS
Trigger: CGAGAGGTACTTGGGCCTCCATGGACTTGACAACAG...GCAGATCGGAAGTAACTGCTCCCTCCTCAAGGTTGTCTTCAGACGTCTTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp TTCCCAAGCAAAACTGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCGCTGTTGTCAAGTCCATaGAGGCCCAAGTACCTCTCG +
Preference number: 4 (lower is better)
Translates to: FPSKTAFRIRDTHAMEHPLLSSP*RPKYLS
Trigger: CGAGAGGTACTTGGGCCTCCATGGACTTGACAACAG...CGGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp CGGGGAAGGAGCTTGTTTCCCAAGCAAAACTGCCTTCCGCATCCGAGACACACACTCGATGGGCTACCTTaGTCATCTCGTATGCTCTGT +
Preference number: 4 (lower is better)
Translates to: RGRSLFPKQNCLPHPRHTLDGLP*SSRMLC
Trigger: ACAGAGCATACGAGATGACCAAGGTAGCCCATCGAG...TGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGGGAAACAAGCTCCTTCCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GTATCTTACAAGGCTAACGTAGCACATCATCAACCTCCTGCTCGTGGCAGGAAGAGCGCGGAGACTCGATaGGCTACCTTGGTCATCTCG +
Preference number: 4 (lower is better)
Translates to: VSYKANVAHHQPPARGRKSAETR*ATLVIS
Trigger: CGAGATGACCAAGGTAGCCCATCGAGTCTCCGCGCT...CTTCCTGCCACGAGCAGGAGGTTGATGATGTGCTACGTTAGCCTTGTAAGATAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp AACACAGAGGCTAGTGTGGGCGGGTCTCATGCTTCCGCTTGGTGGCTGGAATCTTTTAATGGGTGCTATTaGCTGTCTTCCCCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: NTEASVGGSHASAWWLESFNGCY*LSSPSV
Trigger: CACTGAGGGGGAAGACAGCCAATAGCACCCATTAAA...AGATTCCAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGCCTCTGTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp CTGAAGAAGACACAGTCGGCCAACATCACATTGTCACTCAGAGGAATCATGAGGGGCCATTTGAACCAGTaGAGGGTCCCTCCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: LKKTQSANITLSLRGIMRGHLNQ*RVPPSL
Trigger: GAGGGAGGGAGGGACCCTCCACTGGTTCAAATGGCC...CCTCATGATTCCTCTGAGTGACAATGTGATGTTGGCCGACTGTGTCTTCTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS-3UTR TCA 90 bp GAGGGAGGGCAGGGAAATCCCTCGGTTGCATCTGGTTGTAGAAAGAGCCACGTTCCCCATCCTGCATACTaGAGTTTTGCATTGCTGACT +
Preference number: 4 (lower is better)
Translates to: EGGQGNPSVASGCRKSHVPHPAY*SFALLT
Trigger: AGTCAGCAATGCAAAACTTCAGTATGCAGGATGGGG...AACGTGGCTCTTTCTACAACCAGATGCAACCGAGGGATTTCCCTGCCCTCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp CCCCTCACCATGTTGAACGTCCTCATTACAGGAAGTAGCAAGCCCATATATGAACCCAGTCCCCGGAGGTaGTGGACTGGATGTTGTCGT +
Preference number: 4 (lower is better)
Translates to: PLTMLNVLITGSSKPIYEPSPRR*WTGCCR
Trigger: ACGACAACATCCAGTCCATCACCTCCGGGGACTGGG...TTCATATATGGGCTTGCTACTTCCTGTAATGAGGACGTTCAACATGGTGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp CGGATCGGTCCTGTTTATCAGCACGTTGGTCCTTTCACAAATGGTGGTGAATCAAGAGGCACTGCCTGTTaGAGTTGCCCACCGTGTTGG +
Preference number: 4 (lower is better)
Translates to: RIGPVYQHVGPFTNGGESRGTAC*SCPPCW
Trigger: CCAACACGGTGGGCAACTTCAACAGGCAGTGCCTCT...TGATTCACCACCATTTGTGAAAGGACCAACGTGCTGATAAACAGGACCGATCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp TTTCCCAAGCAAAACTGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCCGTCCTCTTTCGCTGTaGCTGTCAGCAGTTTGTCCT +
Preference number: 4 (lower is better)
Translates to: FPKQNCLPHPRHTCYGTPRPLSL*LSAVCP
Trigger: AGGACAAACTGCTGACAGTCACAGCGAAAGAGGACG...GGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp GGGGGTGTATCTTACAAGGCTAACGTAGCACATCATCAACCTCCTGCTCGTGGCTCATGGGAAAGAGCTTaGTACGGTACCAAGGAGGAC +
Preference number: 4 (lower is better)
Translates to: GGVSYKANVAHHQPPARGSWERA*YGTKED
Trigger: GTCCTCCTTGGTACCGTATCAAGCTCTTTCCCATGA...GCCACGAGCAGGAGGTTGATGATGTGCTACGTTAGCCTTGTAAGATACACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp AGTTCAGTATTCACGAGGGTCCATTGCTGCATCTCTGAGAACAGGCCATTTGAAGCATTATCCCCGGGGTaGGCAGATGCGATGCCTCAC +
Preference number: 4 (lower is better)
Translates to: SSVFTRVHCCISENRPFEALSPG*ADAMPH
Trigger: GTGAGGCATCGCATCTGCTCACCCCGGGGATAATGC...TTCAAATGGCCTGTTCTCAGAGATGCAGCAATGGACCCTCGTGAATACTGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS-3UTR GCA 90 bp TCCCCAAGACGTCTGAAGACAACCTTGAGGAGGGAGCAGTTACTTCCGATCTGCAAATCACACCTTCCTTaGCAGTGGAGACCACACGGA +
Preference number: 4 (lower is better)
Translates to: SPRRLKTTLRREQLLPICKSHLP*QWRPHG
Trigger: TCCGTGTGGTCTCCACTGGCAAGGAAGGTGTGATTT...GCAGATCGGAAGTAACTGCTCCCTCCTCAAGGTTGTCTTCAGACGTCTTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp GCGAAGTCAGTCCTGACATTCAGCTTGTCCACAAGCTCAAAAGGAAATGACAGTAGGATGGACACGTTCTaGGCCCGGTTCAGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: AKSVLTFSLSTSSKGNDSRMDTF*ARFSQV
Trigger: GACCTGGCTGAACCGGGCGCAGAACGTGTCCATCCT...ACTGTCATTTCCTTTTGAGCTTGTGGACAAGCTGAATGTCAGGACTGACTTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp AGGAGGGAGCAGTTACTTCCGATCTGCTTCTTCATCAAGCGCAAAGTCTACACGACTGGATGTTGTCGTTaGTGCTGTTGGGCTGGGACG +
Preference number: 4 (lower is better)
Translates to: RREQLLPICFFIKRKVYTTGCCR*CCWAGT
Trigger: CGTCCCAGCCCAACAGCAGCAACGACAACATCCAGT...CGTGTAGACTTTGCGCTTGATGAAGAAGCAGATCGGAAGTAACTGCTCCCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp TATGAACACGCACTGCTAAAACAATGGTGCTGTAACTGCTGCGTCCATGGCACTTCCCTTGGAAGCCGCTaGCACGGCCGTCACACTTTA +
Preference number: 4 (lower is better)
Translates to: YEHALLKQWCCNCCVHGTSLGSR*HGRHTL
Trigger: TAAAGTGTGACGGCCGTGGCAGCGGCTTCCAAGGGA...AGTGCCATGGACGCAGCAGTTACAGCACCATTGTTTTAGCAGTGCGTGTTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp CCAAGCAAAACTGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCGGCCTTGATTTTCTCCCTTTaGTGGGAGGATGTAGGTGCT +
Preference number: 4 (lower is better)
Translates to: PSKTAFRIRDTHAMEHPALIFSL*WEDVGA
Trigger: AGCACCTACATCCTCCCAGCAAAGGGAGAAAATCAA...GGCCGGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp GCACTCGGATCGGTCCTGTTTATCAGCACGTTGGTCCTTTCACAAATGGTGGTGATGGACCGGTACAGATaGTGTTTGAGGCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: ALGSVLFISTLVLSQMVVMDRYR*CLRLEL
Trigger: CAGCTCCAGCCTCAAACAGCATCTGTACCGGTCCAT...CACCACCATTTGTGAAAGGACCAACGTGCTGATAAACAGGACCGATCCGAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp GGATCGGTCCTGTTTATCAGCACGTTGGTCCTTTCACAAATGGTGGTGAATCACCATCCGAGACACACATaGTATGGAACACCCGGCCCC +
Preference number: 4 (lower is better)
Translates to: GSVLFISTLVLSQMVVNHHPRHT*YGTPGP
Trigger: GGGGCCGGGTGTTCCATAGCATGTGTGTCTCGGATG...GTGATTCACCACCATTTGTGAAAGGACCAACGTGCTGATAAACAGGACCGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp CCCCTCACCATGTTGAACGTCCTCATTACAGGAAGTAGCAAGCCCATATATGAACTGCGTCCATGGCACTaGGACGTGAGACAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: PLTMLNVLITGSSKPIYELRPWH*DVRQGV
Trigger: CACACCCTGTCTCACGTCGCAGTGCCATGGACGCAG...TTCATATATGGGCTTGCTACTTCCTGTAATGAGGACGTTCAACATGGTGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp AGTGCACACCTACAGCCAAGCCCTAGCATAGCTGAGTGGGAGAGAGGTTTTATTCAATGGTGCTGTAACTaGTGCGTCCATGGCACTGCG +
Preference number: 4 (lower is better)
Translates to: SAHLQPSPSIAEWERGFIQWCCN*CVHGTA
Trigger: CGCAGTGCCATGGACGCAGCAGTTACAGCACCATTG...AATAAAACCTCTCTCCCACTCAGCTATGCTAGGGCTTGGCTGTAGGTGTGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp GAGACAGGGTGTGATGTCCCTAACGGGAACACAGAGGCTAGTGTGGGCGGGTCTCAGTTACTTCCGATCTaGTTCTTCATCAAGCGCAAA +
Preference number: 4 (lower is better)
Translates to: ETGCDVPNGNTEASVGGSQLLPI*FFIKRK
Trigger: TTTGCGCTTGATGAAGAAGCAGATCGGAAGTAACTG...AGACCCGCCCACACTAGCCTCTGTGTTCCCGTTAGGGACATCACACCCTGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp TTTAATGGGTGCTATTGGCTGTCTTCCCCCTCAGTGTTTAGGAACGTCCCCAAGACTGGGAACACCGGCTaGACATTTGGTGGGGGTGTA +
Preference number: 4 (lower is better)
Translates to: FNGCYWLSSPSVFRNVPKTGNTG*TFGGGV
Trigger: TACACCCCCACCAAATGTGCAGCCGGTGTTCCCAGT...CTTGGGGACGTTCCTAAACACTGAGGGGGAAGACAGCCAATAGCACCCATTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp AACACAGAGGCTAGTGTGGGCGGGTCTCATGCTTCCGCTTGGTGGCTGGAATCTATGGAGGGTGGGTGTTaGTTTAAACAAAAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: NTEASVGGSHASAWWLESMEGGC*FKQKAR
Trigger: CCTGGCTTTTTGTTTAAAGCAACACCCACCCTCCAT...AGATTCCAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGCCTCTGTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404039.5
CDS-3UTR GCA 90 bp TTATCAGTTCAGTATTCACGAGGGTCCATTGCTGCATCTCTGAGAACAGGCCATCTGCAGGTGCATGGCTaGGAAGCCTGGTGCCATTGG +
Preference number: 4 (lower is better)
Translates to: LSVQYSRGSIAASLRTGHLQVHG*EAWCHW
Trigger: CCAATGGCACCAGGCTTCGCAGCCATGCACCTGCAG...ATGGCCTGTTCTCAGAGATGCAGCAATGGACCCTCGTGAATACTGAACTGATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS-3UTR GCA 90 bp AGGGAATCCAGGAGAGCCAGTCTCCTTCCCATGATTATCAGTTCAGTATTCACGGACAATGGACAGTGCTaGCTGAGGGCTGCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: RESRRASLLPMIISSVFTDNGQC*LRAAGA
Trigger: TGCACCTGCAGCCCTCAGGCAGCACTGTCCATTGTC...CGTGAATACTGAACTGATAATCATGGGAAGGAGACTGGCTCTCCTGGATTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS-3UTR CCA 90 bp AGGGAGCAGTTACTTCCGATCTGCTTCTTCATCAAGCGCAAAGTCTACACGTGGAAGCGCTTGGCTCCTTaGCTGTGGTCATGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: REQLLPICFFIKRKVYTWKRLAP*LWSWSV
Trigger: GACAGACCATGACCACAGCCAAGGAGCCAAGCGCTT...CCACGTGTAGACTTTGCGCTTGATGAAGAAGCAGATCGGAAGTAACTGCTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332007.7
CDS-3UTR CCA 90 bp CGGGGAAGGAGCTTGTTTCCCAAGCAAAACTGCCTTCCGCATCCGAGACACACAATTGCTGACTTCTGGTaGGTCCAGACTTTGAGGATC +
Preference number: 4 (lower is better)
Translates to: RGRSLFPKQNCLPHPRHTIADFW*VQTLRI
Trigger: GATCCTCAAAGTCTGGACCCACCAGAAGTCAGCAAT...TGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGGGAAACAAGCTCCTTCCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp ATGGGTGCTATTGGCTGTCTTCCCCCTCAGTGTTTAGGAACGTCCCCAAGACGTTGCATTGCTGACTTCTaGTGGGTCCAGACTTTGAGG +
Preference number: 4 (lower is better)
Translates to: MGAIGCLPPQCLGTSPRRCIADF*WVQTLR
Trigger: CCTCAAAGTCTGGACCCACCAGAAGTCAGCAATGCA...ACGTCTTGGGGACGTTCCTAAACACTGAGGGGGAAGACAGCCAATAGCACCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp ATCTGCTTCTTCATCAAGCGCAAAGTCTACACGTGGACTGGAGAAAGGAAAGGGGGAGCCGGTGTAAGTTaGGAGCTCCATGATGGGGAC +
Preference number: 4 (lower is better)
Translates to: ICFFIKRKVYTWTGERKGGAGVS*ELHDGD
Trigger: GTCCCCATCATGGAGCTCCCAACTTACACCGGCTCC...CCCTTTCCTTTCTCCAGTCCACGTGTAGACTTTGCGCTTGATGAAGAAGCAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp TATGAACACGCACTGCTAAAACAATGGTGCTGTAACTGCTGCGTCCATGGCACTACACAGAGGCTAGTGTaGGCGGGTCTCATGCTTCCG +
Preference number: 4 (lower is better)
Translates to: YEHALLKQWCCNCCVHGTTQRLV*AGLMLP
Trigger: CGGAAGCATGAGACCCGCCCACACTAGCCTCTGTGT...AGTGCCATGGACGCAGCAGTTACAGCACCATTGTTTTAGCAGTGCGTGTTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GGGTGCTATTGGCTGTCTTCCCCCTCAGTGTTTAGGAACGTCCCCAAGACGTCTCGTTCAGAGCTCATGTaGATAAACCCAAAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: GCYWLSSPSVFRNVPKTSRSELM*INPKPQ
Trigger: TTGGGGCTTTGGGTTTATCCACATGAGCTCTGAACG...AGACGTCTTGGGGACGTTCCTAAACACTGAGGGGGAAGACAGCCAATAGCACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp CCAAGCAAAACTGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCGGCCTGGCTGAAGACTGGATaGAAACGGGTTTTTGAAGGA +
Preference number: 4 (lower is better)
Translates to: PSKTAFRIRDTHAMEHPAWLKTG*KRVFEG
Trigger: TCCTTCAAAAACCCGTTTCCATCCAGTCTTCAGCCA...GGCCGGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404039.5
CDS-3UTR CCA 90 bp AGTTCAGTATTCACGAGGGTCCATTGCTGCATCTCTGAGAACAGGCCATTTGAAGGCAGTCCTGCCTCCTaGGACTCTCCTGCAATCCTC +
Preference number: 4 (lower is better)
Translates to: SSVFTRVHCCISENRPFEGSPAS*DSPAIL
Trigger: GAGGATTGCAGGAGAGTCCCAGGAGGCAGGACTGCC...TTCAAATGGCCTGTTCTCAGAGATGCAGCAATGGACCCTCGTGAATACTGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS-3UTR TCA 90 bp TTCCCAAGCAAAACTGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCGCATACAGCCAGTCACTaGGGCCATTGTAAATCACAC +
Preference number: 4 (lower is better)
Translates to: FPSKTAFRIRDTHAMEHPHTASH*GHCKSH
Trigger: GTGTGATTTACAATGGCCTCAGTGACTGGCTGTATG...CGGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp GAGGGAGCAGTTACTTCCGATCTGCTTCTTCATCAAGCGCAAAGTCTACACGTGAAGTTGGGAGCTCCATaGTGGGGACACGGGAATCAT +
Preference number: 4 (lower is better)
Translates to: EGAVTSDLLLHQAQSLHVKLGAP*WGHGNH
Trigger: ATGATTCCCGTGTCCCCATCATGGAGCTCCCAACTT...CACGTGTAGACTTTGCGCTTGATGAAGAAGCAGATCGGAAGTAACTGCTCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp CCCCTCACCATGTTGAACGTCCTCATTACAGGAAGTAGCAAGCCCATATATGAAACGCATCTCCTCTGCTaGTGGGATGCCAAGGACACC +
Preference number: 4 (lower is better)
Translates to: PLTMLNVLITGSSKPIYETHLLC*WDAKDT
Trigger: GGTGTCCTTGGCATCCCATCAGCAGAGGAGATGCGT...TTCATATATGGGCTTGCTACTTCCTGTAATGAGGACGTTCAACATGGTGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp ATCTGCTTCTTCATCAAGCGCAAAGTCTACACGTGGACTGGAGAAAGGAAAGGGGTAGACTGGACTGGCTaGAGACTGGATGGAAACGGG +
Preference number: 4 (lower is better)
Translates to: ICFFIKRKVYTWTGERKGVDWTG*RLDGNG
Trigger: CCCGTTTCCATCCAGTCTTCAGCCAGTCCAGTCTAC...CCCTTTCCTTTCTCCAGTCCACGTGTAGACTTTGCGCTTGATGAAGAAGCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404039.5
CDS-3UTR TCA 90 bp TGTATGAGCCAGGAAAATAATGTAATTGGAGGCTCCTGGAGACCTCAAGTGTATTCTGCGGGCACCCAGTaGCCAGGGATAGGATGGGGA +
Preference number: 4 (lower is better)
Translates to: CMSQENNVIGGSWRPQVYSAGTQ*PGIGWG
Trigger: TCCCCATCCTATCCCTGGTCACTGGGTGCCCGCAGA...ATACACTTGAGGTCTCCAGGAGCCTCCAATTACATTATTTTCCTGGCTCATACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS-3UTR GCA 90 bp CCCCTCACCATGTTGAACGTCCTCATTACAGGAAGTAGCAAGCCCATATATGAAGCAGGAAGCTGCCGCTaGTTAGTGGGGCTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: PLTMLNVLITGSSKPIYEAGSCR*LVGLLQ
Trigger: TTGGAGAAGCCCCACTAAGCAGCGGCAGCTTCCTGC...TTCATATATGGGCTTGCTACTTCCTGTAATGAGGACGTTCAACATGGTGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332007.7
CDS-3UTR GCA 90 bp TATGAACACGCACTGCTAAAACAATGGTGCTGTAACTGCTGCGTCCATGGCACTCCTTTCCAATTCCTCTaGGGAGGGTTACTCCCCACC +
Preference number: 4 (lower is better)
Translates to: YEHALLKQWCCNCCVHGTPFQFL*GGLLPT
Trigger: GGTGGGGAGTAACCCTCCGCAGAGGAATTGGAAAGG...AGTGCCATGGACGCAGCAGTTACAGCACCATTGTTTTAGCAGTGCGTGTTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp AGGGAATCCAGGAGAGCCAGTCTCCTTCCCATGATTATCAGTTCAGTATTCACGCCTTTCCAATTCCTCTaGGGAGGGTTACTCCCCACC +
Preference number: 4 (lower is better)
Translates to: RESRRASLLPMIISSVFTPFQFL*GGLLPT
Trigger: GGTGGGGAGTAACCCTCCGCAGAGGAATTGGAAAGG...CGTGAATACTGAACTGATAATCATGGGAAGGAGACTGGCTCTCCTGGATTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS-3UTR GCA 90 bp CTGCGTCCATGGCACTGCGACGTGAGACAGGGTGTGATGTCCCTAACGGGAACACTGTTTCCCGACATGTaGACAGTAGTAGATATTGTT +
Preference number: 4 (lower is better)
Translates to: LRPWHCDVRQGVMSLTGTLFPDM*TVVDIV
Trigger: AACAATATCTACTACTGTGCACATGTCGGGAAACAG...TGTTCCCGTTAGGGACATCACACCCTGTCTCACGTCGCAGTGCCATGGACGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp CCCCTCACCATGTTGAACGTCCTCATTACAGGAAGTAGCAAGCCCATATATGAAGGATGTTGTCGTTGCTaGTGTTGGGCTGGGACGAGG +
Preference number: 4 (lower is better)
Translates to: PLTMLNVLITGSSKPIYEGCCRC*CWAGTR
Trigger: CCTCGTCCCAGCCCAACAGCAGCAACGACAACATCC...TTCATATATGGGCTTGCTACTTCCTGTAATGAGGACGTTCAACATGGTGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp TATGAACACGCACTGCTAAAACAATGGTGCTGTAACTGCTGCGTCCATGGCACTTCACAGGAGAGGCACTaGCTGTTGAAGTTGCCCACC +
Preference number: 4 (lower is better)
Translates to: YEHALLKQWCCNCCVHGTSQERH*LLKLPT
Trigger: GGTGGGCAACTTCAACAGGCAGTGCCTCTCCTGTGA...AGTGCCATGGACGCAGCAGTTACAGCACCATTGTTTTAGCAGTGCGTGTTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp CCAAGCAAAACTGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCGGCCCAGTTACTTCCGATCTaGTTCTTCATCAAGCGCAAA +
Preference number: 4 (lower is better)
Translates to: PSKTAFRIRDTHAMEHPAQLLPI*FFIKRK
Trigger: TTTGCGCTTGATGAAGAAGCAGATCGGAAGTAACTG...GGCCGGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp TTCCGATCTGCTTCTTCATCAAGCGCAAAGTCTACACGTGGACTGGAGAAAGGAGCCACAGTGTCAGCATaGAGGCTCAACACGGGGTTA +
Preference number: 4 (lower is better)
Translates to: FRSASSSSAKSTRGLEKGATVSA*RLNTGL
Trigger: TAACCCCGTGTTGAGCCTGCATGCTGACACTGTGGC...TCCTTTCTCCAGTCCACGTGTAGACTTTGCGCTTGATGAAGAAGCAGATCGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp GGATCGGTCCTGTTTATCAGCACGTTGGTCCTTTCACAAATGGTGGTGAATCACGCCACAGTGTCAGCATaGAGGCTCAACACGGGGTTA +
Preference number: 4 (lower is better)
Translates to: GSVLFISTLVLSQMVVNHATVSA*RLNTGL
Trigger: TAACCCCGTGTTGAGCCTGCATGCTGACACTGTGGC...GTGATTCACCACCATTTGTGAAAGGACCAACGTGCTGATAAACAGGACCGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp TTTAATGGGTGCTATTGGCTGTCTTCCCCCTCAGTGTTTAGGAACGTCCCCAAGCCCCAAACGCCAAAATaGAACAGGGACGCATCTCCT +
Preference number: 4 (lower is better)
Translates to: FNGCYWLSSPSVFRNVPKPQTPK*NRDASP
Trigger: AGGAGATGCGTCCCTGTTGCATTTTGGCGTTTGGGG...CTTGGGGACGTTCCTAAACACTGAGGGGGAAGACAGCCAATAGCACCCATTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp GAGGGAATCCAGGAGAGCCAGTCTCCTTCCCATGATTATCAGTTCAGTATTCACCAAGGCTCACTCGGTTaGTCTCTGGCCCGAAATCTG +
Preference number: 4 (lower is better)
Translates to: EGIQESQSPSHDYQFSIHQGSLG*SLARNL
Trigger: CAGATTTCGGGCCAGAGAGCAACCGAGTGAGCCTTG...GTGAATACTGAACTGATAATCATGGGAAGGAGACTGGCTCTCCTGGATTCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS-3UTR CCA 90 bp CACATCCCCACTTCCCTCCGACCAGATGTCGTGGCCAGAGCTGGCTTCCCCTTCACGAGTGTTGATATATaGGTTCCACATTGTATGAAA +
Preference number: 4 (lower is better)
Translates to: HIPTSLRPDVVARAGFPFTSVDI*VPHCMK
Trigger: TTTCATACAATGTGGAACCCATATATCAACACTCGT...GAAGGGGAAGCCAGCTCTGGCCACGACATCTGGTCGGAGGGAAGTGGGGATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp CCTCAGTGTTTAGGAACGTCCCCAAGACGTCTGAAGACAACCTTGAGGAGGGAGATTGCTGACTTCTGGTaGGTCCAGACTTTGAGGATC +
Preference number: 4 (lower is better)
Translates to: PQCLGTSPRRLKTTLRREIADFW*VQTLRI
Trigger: GATCCTCAAAGTCTGGACCCACCAGAAGTCAGCAAT...CTCCCTCCTCAAGGTTGTCTTCAGACGTCTTGGGGACGTTCCTAAACACTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp CTCATTACAGGAAGTAGCAAGCCCATATATGAACACGCACTGCTAAAACAATGGCGGCGACCTTGGTGCTaGTGGCCCACTTCACCATGG +
Preference number: 4 (lower is better)
Translates to: LITGSSKPIYEHALLKQWRRPWC*WPTSPW
Trigger: CCATGGTGAAGTGGGCCACCAGCACCAAGGTCGCCG...CCATTGTTTTAGCAGTGCGTGTTCATATATGGGCTTGCTACTTCCTGTAATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp CGGATCGGTCCTGTTTATCAGCACGTTGGTCCTTTCACAAATGGTGGTGAATCACCGGAGGTGATGGACTaGATGTTGTCGTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RIGPVYQHVGPFTNGGESPEVMD*MLSLLL
Trigger: CAGCAGCAACGACAACATCCAGTCCATCACCTCCGG...TGATTCACCACCATTTGTGAAAGGACCAACGTGCTGATAAACAGGACCGATCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp AGGAGGGAGCAGTTACTTCCGATCTGCTTCTTCATCAAGCGCAAAGTCTACACGAGTTGCCCACCGTGTTaGCACTGTAGAGTTGTCGTC +
Preference number: 4 (lower is better)
Translates to: RREQLLPICFFIKRKVYTSCPPC*HCRVVV
Trigger: GACGACAACTCTACAGTGCCAACACGGTGGGCAACT...CGTGTAGACTTTGCGCTTGATGAAGAAGCAGATCGGAAGTAACTGCTCCCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp TCCCCAAGACGTCTGAAGACAACCTTGAGGAGGGAGCAGTTACTTCCGATCTGCAAGAAGTCCATGCTATaGCTGAAGGAAGCGCTGAAG +
Preference number: 4 (lower is better)
Translates to: SPRRLKTTLRREQLLPICKKSML*LKEALK
Trigger: CTTCAGCGCTTCCTTCAGCCATAGCATGGACTTCTT...GCAGATCGGAAGTAACTGCTCCCTCCTCAAGGTTGTCTTCAGACGTCTTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GGGGGTGTATCTTACAAGGCTAACGTAGCACATCATCAACCTCCTGCTCGTGGCAAGAAGTCCATGCTATaGCTGAAGGAAGCGCTGAAG +
Preference number: 4 (lower is better)
Translates to: GGVSYKANVAHHQPPARGKKSML*LKEALK
Trigger: CTTCAGCGCTTCCTTCAGCCATAGCATGGACTTCTT...GCCACGAGCAGGAGGTTGATGATGTGCTACGTTAGCCTTGTAAGATACACCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GGGGGTGTATCTTACAAGGCTAACGTAGCACATCATCAACCTCCTGCTCGTGGCATTTTCTCCCTTTGCTaGGAGGATGTAGGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: GGVSYKANVAHHQPPARGIFSLC*EDVGAQ
Trigger: CTGAGCACCTACATCCTCCCAGCAAAGGGAGAAAAT...GCCACGAGCAGGAGGTTGATGATGTGCTACGTTAGCCTTGTAAGATACACCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp AGTGCACACCTACAGCCAAGCCCTAGCATAGCTGAGTGGGAGAGAGGTTTTATTCTGTTGTCAAGTCCATaGAGGCCCAAGTACCTCTCG +
Preference number: 4 (lower is better)
Translates to: SAHLQPSPSIAEWERGFILLSSP*RPKYLS
Trigger: CGAGAGGTACTTGGGCCTCCATGGACTTGACAACAG...AATAAAACCTCTCTCCCACTCAGCTATGCTAGGGCTTGGCTGTAGGTGTGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp TCCCCAAGACGTCTGAAGACAACCTTGAGGAGGGAGCAGTTACTTCCGATCTGCTTTAATGGGTGCTATTaGCTGTCTTCCCCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: SPRRLKTTLRREQLLPICFNGCY*LSSPSV
Trigger: CACTGAGGGGGAAGACAGCCAATAGCACCCATTAAA...GCAGATCGGAAGTAACTGCTCCCTCCTCAAGGTTGTCTTCAGACGTCTTGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GCGAAGTCAGTCCTGACATTCAGCTTGTCCACAAGCTCAAAAGGAAATGACAGTTGTCGTGGCCAGAGCTaGCTTCCCCTTCCAGACCTA +
Preference number: 4 (lower is better)
Translates to: AKSVLTFSLSTSSKGNDSCRGQS*LPLPDL
Trigger: TAGGTCTGGAAGGGGAAGCCAGCTCTGGCCACGACA...ACTGTCATTTCCTTTTGAGCTTGTGGACAAGCTGAATGTCAGGACTGACTTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp GTATCTTACAAGGCTAACGTAGCACATCATCAACCTCCTGCTCGTGGCAGGAAGTCATGGGAAAGAGCTTaGTACGGTACCAAGGAGGAC +
Preference number: 4 (lower is better)
Translates to: VSYKANVAHHQPPARGRKSWERA*YGTKED
Trigger: GTCCTCCTTGGTACCGTATCAAGCTCTTTCCCATGA...CTTCCTGCCACGAGCAGGAGGTTGATGATGTGCTACGTTAGCCTTGTAAGATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp TTCCCAAGCAAAACTGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCGGTTTTATTCCATGGATaGACAGACGCTACCATGCCA +
Preference number: 4 (lower is better)
Translates to: FPSKTAFRIRDTHAMEHPVLFHG*TDATMP
Trigger: TGGCATGGTAGCGTCTGTTCATCCATGGAATAAAAC...CGGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp CCTCAGTGTTTAGGAACGTCCCCAAGACGTCTGAAGACAACCTTGAGGAGGGAGGTTTTATTCCATGGATaGACAGACGCTACCATGCCA +
Preference number: 4 (lower is better)
Translates to: PQCLGTSPRRLKTTLRREVLFHG*TDATMP
Trigger: TGGCATGGTAGCGTCTGTTCATCCATGGAATAAAAC...CTCCCTCCTCAAGGTTGTCTTCAGACGTCTTGGGGACGTTCCTAAACACTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp GAGGGAATCCAGGAGAGCCAGTCTCCTTCCCATGATTATCAGTTCAGTATTCACCACTCAGAGGAATCATaGGGGAATCCAGGAGAGCCA +
Preference number: 4 (lower is better)
Translates to: EGIQESQSPSHDYQFSIHHSEES*GNPGEP
Trigger: TGGCTCTCCTGGATTCCCTCATGATTCCTCTGAGTG...GTGAATACTGAACTGATAATCATGGGAAGGAGACTGGCTCTCCTGGATTCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS-3UTR GCA 90 bp TTTCCCAAGCAAAACTGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCCGGAGACCACCAGTGTaGGATGTGTGTCTTCAAAAT +
Preference number: 4 (lower is better)
Translates to: FPKQNCLPHPRHTCYGTPRRPPV*DVCLQN
Trigger: ATTTTGAAGACACACATCGCACACTGGTGGTCTCCG...GGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp TCAGTCCTGACATTCAGCTTGTCCACAAGCTCAAAAGGAAATGACAGTAATGGATCACGGCGACCTTGGTaGTGGTGGCCCACTTCACCA +
Preference number: 4 (lower is better)
Translates to: SVLTFSLSTSSKGNDSNGSRRPW*WWPTSP
Trigger: TGGTGAAGTGGGCCACCAGCACCAAGGTCGCCGTGA...TCCATTACTGTCATTTCCTTTTGAGCTTGTGGACAAGCTGAATGTCAGGACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp ATGTTGAACGTCCTCATTACAGGAAGTAGCAAGCCCATATATGAACACGCACTGGGATGTTGTCGTTGCTaGTGTTGGGCTGGGACGAGG +
Preference number: 4 (lower is better)
Translates to: MLNVLITGSSKPIYEHALGCCRC*CWAGTR
Trigger: CCTCGTCCCAGCCCAACAGCAGCAACGACAACATCC...CAGTGCGTGTTCATATATGGGCTTGCTACTTCCTGTAATGAGGACGTTCAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp TTCCGATCTGCTTCTTCATCAAGCGCAAAGTCTACACGTGGACTGGAGAAAGGAATGGACCGGTACAGATaGTGTTTGAGGCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: FRSASSSSAKSTRGLEKGMDRYR*CLRLEL
Trigger: CAGCTCCAGCCTCAAACAGCATCTGTACCGGTCCAT...TCCTTTCTCCAGTCCACGTGTAGACTTTGCGCTTGATGAAGAAGCAGATCGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp TTTCCCAAGCAAAACTGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCAAAGAGCCACGTTTGTaGTTAGAGCGACCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: FPKQNCLPHPRHTCYGTPKEPRL*LERPEL
Trigger: AAGCTCAGGTCGCTCTAAGCACAAACGTGGCTCTTT...GGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp GCGAAGTCAGTCCTGACATTCAGCTTGTCCACAAGCTCAAAAGGAAATGACAGTGAACAGACGCTACCATaGCACATCCCCACTTCCCTC +
Preference number: 4 (lower is better)
Translates to: AKSVLTFSLSTSSKGNDSEQTLP*HIPTSL
Trigger: GAGGGAAGTGGGGATGTGGCATGGTAGCGTCTGTTC...ACTGTCATTTCCTTTTGAGCTTGTGGACAAGCTGAATGTCAGGACTGACTTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp TTTCTTGGGCCTGATGACAGCGTGTCTCTCTCCACCAGTGTTGAAGGAACAAGCATGGCAAGCTGGCAATaGTGTGCTGTATCCATTGAC +
Preference number: 4 (lower is better)
Translates to: FLGPDDSVSLSTSVEGTSMASWQ*CAVSID
Trigger: GTCAATGGATACAGCACAGCATTGCCAGCTTGCCAT...GCTTGTTCCTTCAACACTGGTGGAGAGAGACACGCTGTCATCAGGCCCAAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS-3UTR GCA 90 bp CTGAAGAAGACACAGTCGGCCAACATCACATTGTCACTCAGAGGAATCATGAGGTATGACAATGGACAGTaGTGCCTGAGGGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: LKKTQSANITLSLRGIMRYDNGQ*CLRAAG
Trigger: ACCTGCAGCCCTCAGGCAGCACTGTCCATTGTCATA...CCTCATGATTCCTCTGAGTGACAATGTGATGTTGGCCGACTGTGTCTTCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS-3UTR GCA 90 bp ACTCAGAGGAATCATGAGGGAATCCAGGAGAGCCAGTCTCCTTCCCATGATTATACGAGGGTCCATTGCTaGATCTCTGAGAACAGGCCA +
Preference number: 4 (lower is better)
Translates to: TQRNHEGIQESQSPSHDYTRVHC*ISENRP
Trigger: TGGCCTGTTCTCAGAGATGCAGCAATGGACCCTCGT...ATAATCATGGGAAGGAGACTGGCTCTCCTGGATTCCCTCATGATTCCTCTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS-3UTR CCA 90 bp CCCCTCACCATGTTGAACGTCCTCATTACAGGAAGTAGCAAGCCCATATATGAATCACGGTGGGGTAGATaGAGCCGGTGTAAGTTGGGA +
Preference number: 4 (lower is better)
Translates to: PLTMLNVLITGSSKPIYESRWGR*SRCKLG
Trigger: TCCCAACTTACACCGGCTCCATCTACCCCACCGTGA...TTCATATATGGGCTTGCTACTTCCTGTAATGAGGACGTTCAACATGGTGAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp TCAGTCCTGACATTCAGCTTGTCCACAAGCTCAAAAGGAAATGACAGTAATGGAGGTAGGGCTTCACGGTaGGGTAGATGGAGCCGGTGT +
Preference number: 4 (lower is better)
Translates to: SVLTFSLSTSSKGNDSNGGRASR*GRWSRC
Trigger: ACACCGGCTCCATCTACCCCACCGTGAAGCCCTACC...TCCATTACTGTCATTTCCTTTTGAGCTTGTGGACAAGCTGAATGTCAGGACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp AGGAGGGAGCAGTTACTTCCGATCTGCTTCTTCATCAAGCGCAAAGTCTACACGTCTCACTTCCAGCCTTaGGATAGTGGTAGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: RREQLLPICFFIKRKVYTSHFQP*DSGRAS
Trigger: TGAAGCCCTACCACTATCCCAAGGCTGGAAGTGAGA...CGTGTAGACTTTGCGCTTGATGAAGAAGCAGATCGGAAGTAACTGCTCCCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GAGGGAGGGCAGGGAAATCCCTCGGTTGCATCTGGTTGTAGAAAGAGCCACGTTGCTTCAGTATCTGCATaGGCAGGTTGTAATCATCAA +
Preference number: 4 (lower is better)
Translates to: EGGQGNPSVASGCRKSHVASVSA*AGCNHQ
Trigger: TTGATGATTACAACCTGCCCATGCAGATACTGAAGC...AACGTGGCTCTTTCTACAACCAGATGCAACCGAGGGATTTCCCTGCCCTCCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GCACTCGGATCGGTCCTGTTTATCAGCACGTTGGTCCTTTCACAAATGGTGGTGATTTTCTCCCTTTGCTaGGAGGATGTAGGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: ALGSVLFISTLVLSQMVVIFSLC*EDVGAQ
Trigger: CTGAGCACCTACATCCTCCCAGCAAAGGGAGAAAAT...CACCACCATTTGTGAAAGGACCAACGTGCTGATAAACAGGACCGATCCGAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp AGTGCACACCTACAGCCAAGCCCTAGCATAGCTGAGTGGGAGAGAGGTTTTATTGTCAGCAGTTTGTCCTaGATCCTGAAGCATTCCACG +
Preference number: 4 (lower is better)
Translates to: SAHLQPSPSIAEWERGFIVSSLS*ILKHST
Trigger: CGTGGAATGCTTCAGGATCCAGGACAAACTGCTGAC...AATAAAACCTCTCTCCCACTCAGCTATGCTAGGGCTTGGCTGTAGGTGTGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp TTTAATGGGTGCTATTGGCTGTCTTCCCCCTCAGTGTTTAGGAACGTCCCCAAGGTCAGCAGTTTGTCCTaGATCCTGAAGCATTCCACG +
Preference number: 4 (lower is better)
Translates to: FNGCYWLSSPSVFRNVPKVSSLS*ILKHST
Trigger: CGTGGAATGCTTCAGGATCCAGGACAAACTGCTGAC...CTTGGGGACGTTCCTAAACACTGAGGGGGAAGACAGCCAATAGCACCCATTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp TCTGAAGAAGACACAGTCGGCCAACATCACATTGTCACTCAGAGGAATCATGAGGGTCCCCCTTGTACATaGCAAGCTGGCAATGCTGTG +
Preference number: 4 (lower is better)
Translates to: SEEDTVGQHHIVTQRNHEGPPCT*QAGNAV
Trigger: CACAGCATTGCCAGCTTGCCATGTACAAGGGGGACC...CTCATGATTCCTCTGAGTGACAATGTGATGTTGGCCGACTGTGTCTTCTTCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406326.5
3UTR CAA 72 bp TGTTTAGGAACGTCCCCAAGACGTCTGAAGACAACCTaGAGGAGGGAGCAGTTACTTCCGATCTGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: CLGTSPRRLKTT*RREQLLPICFF
Trigger: GAAGAAGCAGATCGGAAGTAACTGCTCCCTCCTCAAGGTTGTCTTCAGACGTCTTGGGGACGTTCCTAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
3UTR CAA 72 bp GGCTGGGAGCTGGCGAAGTCAGTCCTGACATTCAGCTaGTCCACAAGCTCAAAAGGAAATGACAGTAATGGA +
Preference number: 4 (lower is better)
Translates to: GWELAKSVLTFS*STSSKGNDSNG
Trigger: TCCATTACTGTCATTTCCTTTTGAGCTTGTGGACAAGCTGAATGTCAGGACTGACTTCGCCAGCTCCCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp AGTGCACACCTACAGCCAAGCCCTAGCATAGCTGAGTGGGAGAGAGGTTTTATTCCCCATCCTGCATACTaGAGTTTTGCATTGCTGACT +
Preference number: 4 (lower is better)
Translates to: SAHLQPSPSIAEWERGFIPHPAY*SFALLT
Trigger: AGTCAGCAATGCAAAACTTCAGTATGCAGGATGGGG...AATAAAACCTCTCTCCCACTCAGCTATGCTAGGGCTTGGCTGTAGGTGTGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp GGATCGGTCCTGTTTATCAGCACGTTGGTCCTTTCACAAATGGTGGTGAATCACGTGAATGTCTGGCCTTaGTTTTCTCCCTTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: GSVLFISTLVLSQMVVNHVNVWP*FSPFAG
Trigger: CCCAGCAAAGGGAGAAAATCAAGGCCAGACATTCAC...GTGATTCACCACCATTTGTGAAAGGACCAACGTGCTGATAAACAGGACCGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp TTCCGATCTGCTTCTTCATCAAGCGCAAAGTCTACACGTGGACTGGAGAAAGGAGTGAATGTCTGGCCTTaGTTTTCTCCCTTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: FRSASSSSAKSTRGLEKGVNVWP*FSPFAG
Trigger: CCCAGCAAAGGGAGAAAATCAAGGCCAGACATTCAC...TCCTTTCTCCAGTCCACGTGTAGACTTTGCGCTTGATGAAGAAGCAGATCGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp CCCCTCACCATGTTGAACGTCCTCATTACAGGAAGTAGCAAGCCCATATATGAAGAGCAGAGCCGCAGGTaGATGTCTGGCCTTGATTTT +
Preference number: 4 (lower is better)
Translates to: PLTMLNVLITGSSKPIYEEQSRR*MSGLDF
Trigger: AAAATCAAGGCCAGACATTCACCTGCGGCTCTGCTC...TTCATATATGGGCTTGCTACTTCCTGTAATGAGGACGTTCAACATGGTGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp AGTGCACACCTACAGCCAAGCCCTAGCATAGCTGAGTGGGAGAGAGGTTTTATTGTTTGTCCTGGATCCTaGAGCATTCCACGAAGAAGT +
Preference number: 4 (lower is better)
Translates to: SAHLQPSPSIAEWERGFIVCPGS*SIPRRS
Trigger: ACTTCTTCGTGGAATGCTTCAGGATCCAGGACAAAC...AATAAAACCTCTCTCCCACTCAGCTATGCTAGGGCTTGGCTGTAGGTGTGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp ATGACAGCGTGTCTCTCTCCACCAGTGTTGAAGGAACAAGCCTGTGCTGGCAGCTCACATGATTTTGAATaGGGCAATGTCAACTTCCTG +
Preference number: 4 (lower is better)
Translates to: MTACLSPPVLKEQACAGSSHDFE*GNVNFL
Trigger: CAGGAAGTTGACATTGCCTCATTCAAAATCATGTGA...GCTGCCAGCACAGGCTTGTTCCTTCAACACTGGTGGAGAGAGACACGCTGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS-3UTR TCA 90 bp GACACAGTCGGCCAACATCACATTGTCACTCAGAGGAATCATGAGGGAATCCAGTCTCCATGGAATATCTaGAACAGGTCCCCCTTGTAC +
Preference number: 4 (lower is better)
Translates to: DTVGQHHIVTQRNHEGIQSPWNI*NRSPLY
Trigger: GTACAAGGGGGACCTGTTTCAGATATTCCATGGAGA...CTGGATTCCCTCATGATTCCTCTGAGTGACAATGTGATGTTGGCCGACTGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS-3UTR GCA 90 bp AGGGAGGGCAGGGAAATCCCTCGGTTGCATCTGGTTGTAGAAAGAGCCACGTTTAGAAACAATGATAACTaGTTAGCAACCGGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: REGREIPRLHLVVERATFRNNDN*LATGKW
Trigger: CCACTTGCCGGTTGCTAAGCAGTTATCATTGTTTCT...AAACGTGGCTCTTTCTACAACCAGATGCAACCGAGGGATTTCCCTGCCCTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332007.7
CDS-3UTR GCA 90 bp CGGGGAAGGAGCTTGTTTCCCAAGCAAAACTGCCTTCCGCATCCGAGACACACACTGTTTCCCGACATGTaGACAGTAGTAGATATTGTT +
Preference number: 4 (lower is better)
Translates to: RGRSLFPKQNCLPHPRHTLFPDM*TVVDIV
Trigger: AACAATATCTACTACTGTGCACATGTCGGGAAACAG...TGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGGGAAACAAGCTCCTTCCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp GGATCGGTCCTGTTTATCAGCACGTTGGTCCTTTCACAAATGGTGGTGAATCACGGTGTCGGTGAAGGTTaGTGGCTTCAGTATCTGCAT +
Preference number: 4 (lower is better)
Translates to: GSVLFISTLVLSQMVVNHGVGEG*WLQYLH
Trigger: ATGCAGATACTGAAGCCAGCAACCTTCACCGACACC...GTGATTCACCACCATTTGTGAAAGGACCAACGTGCTGATAAACAGGACCGATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp GGTGTATCTTACAAGGCTAACGTAGCACATCATCAACCTCCTGCTCGTGGCAGGCTTGGTCATCTCGTATaGTCTGTTGTCAAGTCCATG +
Preference number: 4 (lower is better)
Translates to: GVSYKANVAHHQPPARGRLGHLV*SVVKSM
Trigger: CATGGACTTGACAACAGAGCATACGAGATGACCAAG...CCTGCCACGAGCAGGAGGTTGATGATGTGCTACGTTAGCCTTGTAAGATACACC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp AGTGCACACCTACAGCCAAGCCCTAGCATAGCTGAGTGGGAGAGAGGTTTTATTAAAGAGCCACGTTTGTaGTTAGAGCGACCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: SAHLQPSPSIAEWERGFIKEPRL*LERPEL
Trigger: AAGCTCAGGTCGCTCTAAGCACAAACGTGGCTCTTT...AATAAAACCTCTCTCCCACTCAGCTATGCTAGGGCTTGGCTGTAGGTGTGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp CTCATTACAGGAAGTAGCAAGCCCATATATGAACACGCACTGCTAAAACAATGGTGGTGCTGTAACTGCTaGGTCCATGGCACTGCGACG +
Preference number: 4 (lower is better)
Translates to: LITGSSKPIYEHALLKQWWCCNC*VHGTAT
Trigger: CGTCGCAGTGCCATGGACGCAGCAGTTACAGCACCA...CCATTGTTTTAGCAGTGCGTGTTCATATATGGGCTTGCTACTTCCTGTAATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp ATGTTGAACGTCCTCATTACAGGAAGTAGCAAGCCCATATATGAACACGCACTGACTGGGAACACCGGCTaGACATTTGGTGGGGGTGTA +
Preference number: 4 (lower is better)
Translates to: MLNVLITGSSKPIYEHALTGNTG*TFGGGV
Trigger: TACACCCCCACCAAATGTGCAGCCGGTGTTCCCAGT...CAGTGCGTGTTCATATATGGGCTTGCTACTTCCTGTAATGAGGACGTTCAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp TTCCGATCTGCTTCTTCATCAAGCGCAAAGTCTACACGTGGACTGGAGAAAGGACCTTTTCCTTCATTTTaGCCCAAGTCCGAACCCGAC +
Preference number: 4 (lower is better)
Translates to: FRSASSSSAKSTRGLEKGPFPSF*PKSEPD
Trigger: GTCGGGTTCGGACTTGGGGCAAAATGAAGGAAAAGG...TCCTTTCTCCAGTCCACGTGTAGACTTTGCGCTTGATGAAGAAGCAGATCGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404039.5
CDS-3UTR GCA 90 bp TCTGAAGAAGACACAGTCGGCCAACATCACATTGTCACTCAGAGGAATCATGAGGCGATGCCTCACACCTaGCACACTCGTATGACAATG +
Preference number: 4 (lower is better)
Translates to: SEEDTVGQHHIVTQRNHEAMPHT*HTRMTM
Trigger: CATTGTCATACGAGTGTGGCAGGTGTGAGGCATCGC...CTCATGATTCCTCTGAGTGACAATGTGATGTTGGCCGACTGTGTCTTCTTCAGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS-3UTR GCA 90 bp TCTGAAGAAGACACAGTCGGCCAACATCACATTGTCACTCAGAGGAATCATGAGAAATCTGCCTGTAGCTaGTGTGCATTATCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: SEEDTVGQHHIVTQRNHEKSACS*CALSPG
Trigger: CCCCGGGGATAATGCACAGCAGCTACAGGCAGATTT...CTCATGATTCCTCTGAGTGACAATGTGATGTTGGCCGACTGTGTCTTCTTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS-3UTR GCA 90 bp TCAAGTGTATATGATATTCTGAAGAAGACACAGTCGGCCAACATCACATTGTCATCCTCTGGGACACTCTaGGGGCACCCAGTGACCAGG +
Preference number: 4 (lower is better)
Translates to: SSVYDILKKTQSANITLSSSGTL*GHPVTR
Trigger: CCTGGTCACTGGGTGCCCGCAGAGTGTCCCAGAGGA...TGACAATGTGATGTTGGCCGACTGTGTCTTCTTCAGAATATCATATACACTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS-3UTR GCA 90 bp ACTCAGAGGAATCATGAGGGAATCCAGGAGAGCCAGTCTCCTTCCCATGATTATTTCACGAGGGTCCATTaGTGCATCTCTGAGAACAGG +
Preference number: 4 (lower is better)
Translates to: TQRNHEGIQESQSPSHDYFTRVH*CISENR
Trigger: CCTGTTCTCAGAGATGCAGCAATGGACCCTCGTGAA...ATAATCATGGGAAGGAGACTGGCTCTCCTGGATTCCCTCATGATTCCTCTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS-3UTR CCA 90 bp ATGGGTGCTATTGGCTGTCTTCCCCCTCAGTGTTTAGGAACGTCCCCAAGACGTACTATTATCTTCCGCTaGTGTCAGAAGTATGACCGA +
Preference number: 4 (lower is better)
Translates to: MGAIGCLPPQCLGTSPRRTIIFR*CQKYDR
Trigger: TCGGTCATACTTCTGACACCAGCGGAAGATAATAGT...ACGTCTTGGGGACGTTCCTAAACACTGAGGGGGAAGACAGCCAATAGCACCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp TCAGTCCTGACATTCAGCTTGTCCACAAGCTCAAAAGGAAATGACAGTAATGGACACCTTCCTTGCCAGTaGAGACCACACGGATGGCCT +
Preference number: 4 (lower is better)
Translates to: SVLTFSLSTSSKGNDSNGHLPCQ*RPHGWP
Trigger: AGGCCATCCGTGTGGTCTCCACTGGCAAGGAAGGTG...TCCATTACTGTCATTTCCTTTTGAGCTTGTGGACAAGCTGAATGTCAGGACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp AATCACCCTAACTATAACGGACGTTCAGAGCTCATGTGGATAAACCCAAAGCCCAGTTGCCCACCGTGTTaGCACTGTAGAGTTGTCGTC +
Preference number: 4 (lower is better)
Translates to: NHPNYNGRSELMWINPKPSCPPC*HCRVVV
Trigger: GACGACAACTCTACAGTGCCAACACGGTGGGCAACT...GGGCTTTGGGTTTATCCACATGAGCTCTGAACGTCCGTTATAGTTAGGGTGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp AGGAGGGAGCAGTTACTTCCGATCTGCTTCTTCATCAAGCGCAAAGTCTACACGATTTTCTCCCTTTGCTaGGAGGATGTAGGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: RREQLLPICFFIKRKVYTIFSLC*EDVGAQ
Trigger: CTGAGCACCTACATCCTCCCAGCAAAGGGAGAAAAT...CGTGTAGACTTTGCGCTTGATGAAGAAGCAGATCGGAAGTAACTGCTCCCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GGGGGTGTATCTTACAAGGCTAACGTAGCACATCATCAACCTCCTGCTCGTGGCTGTTTATCAGCACGTTaGTCCTTTCACAAATGGTGG +
Preference number: 4 (lower is better)
Translates to: GGVSYKANVAHHQPPARGCLSAR*SFHKWW
Trigger: CCACCATTTGTGAAAGGACCAACGTGCTGATAAACA...GCCACGAGCAGGAGGTTGATGATGTGCTACGTTAGCCTTGTAAGATACACCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp AGGGAGCAGTTACTTCCGATCTGCTTCTTCATCAAGCGCAAAGTCTACACGTGGTTAGCCTCGGGGTCATaGATTTTGAAGTCTTCACTG +
Preference number: 4 (lower is better)
Translates to: REQLLPICFFIKRKVYTWLASGS*ILKSSL
Trigger: CAGTGAAGACTTCAAAATTCATGACCCCGAGGCTAA...CCACGTGTAGACTTTGCGCTTGATGAAGAAGCAGATCGGAAGTAACTGCTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp GGATCGGTCCTGTTTATCAGCACGTTGGTCCTTTCACAAATGGTGGTGAATCACCATACAGCCAGTCACTaGGGCCATTGTAAATCACAC +
Preference number: 4 (lower is better)
Translates to: GSVLFISTLVLSQMVVNHHTASH*GHCKSH
Trigger: GTGTGATTTACAATGGCCTCAGTGACTGGCTGTATG...GTGATTCACCACCATTTGTGAAAGGACCAACGTGCTGATAAACAGGACCGATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp GTATCTTACAAGGCTAACGTAGCACATCATCAACCTCCTGCTCGTGGCAGGAAGCTTGGTCATCTCGTATaGTCTGTTGTCAAGTCCATG +
Preference number: 4 (lower is better)
Translates to: VSYKANVAHHQPPARGRKLGHLV*SVVKSM
Trigger: CATGGACTTGACAACAGAGCATACGAGATGACCAAG...CTTCCTGCCACGAGCAGGAGGTTGATGATGTGCTACGTTAGCCTTGTAAGATAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp TTCCGATCTGCTTCTTCATCAAGCGCAAAGTCTACACGTGGACTGGAGAAAGGAGATGTAAATAGACAGTaGACACCTACAGCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: FRSASSSSAKSTRGLEKGDVNRQ*TPTAKP
Trigger: GGGCTTGGCTGTAGGTGTGCACTGTCTATTTACATC...TCCTTTCTCCAGTCCACGTGTAGACTTTGCGCTTGATGAAGAAGCAGATCGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp CTCATTACAGGAAGTAGCAAGCCCATATATGAACACGCACTGCTAAAACAATGGTGGAGACCACACGGATaGCCTGTTTCCCGACATGTG +
Preference number: 4 (lower is better)
Translates to: LITGSSKPIYEHALLKQWWRPHG*PVSRHV
Trigger: CACATGTCGGGAAACAGGCCATCCGTGTGGTCTCCA...CCATTGTTTTAGCAGTGCGTGTTCATATATGGGCTTGCTACTTCCTGTAATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp ATGTTGAACGTCCTCATTACAGGAAGTAGCAAGCCCATATATGAACACGCACTGCGTGTAGGGAAATGCTaGGGTTCTCACTTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: MLNVLITGSSKPIYEHALRVGKC*GSHFQP
Trigger: AGGCTGGAAGTGAGAACCCCAGCATTTCCCTACACG...CAGTGCGTGTTCATATATGGGCTTGCTACTTCCTGTAATGAGGACGTTCAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GGATCGGTCCTGTTTATCAGCACGTTGGTCCTTTCACAAATGGTGGTGAATCACTCTTCATTCTGTCTGTaGAGCCAGGCCTCACTTTCA +
Preference number: 4 (lower is better)
Translates to: GSVLFISTLVLSQMVVNHSSFCL*SQASLS
Trigger: TGAAAGTGAGGCCTGGCTCCACAGACAGAATGAAGA...GTGATTCACCACCATTTGTGAAAGGACCAACGTGCTGATAAACAGGACCGATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp TCAGTCCTGACATTCAGCTTGTCCACAAGCTCAAAAGGAAATGACAGTAATGGACCGGAGGTGATGGACTaGATGTTGTCGTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SVLTFSLSTSSKGNDSNGPEVMD*MLSLLL
Trigger: CAGCAGCAACGACAACATCCAGTCCATCACCTCCGG...TCCATTACTGTCATTTCCTTTTGAGCTTGTGGACAAGCTGAATGTCAGGACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp AGGGAGCAGTTACTTCCGATCTGCTTCTTCATCAAGCGCAAAGTCTACACGTGGTTTGAAGTCTGTTATTaGAGAGAGAGCAGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: REQLLPICFFIKRKVYTWFEVCY*RESRAA
Trigger: TGCGGCTCTGCTCTCTCTCCAATAACAGACTTCAAA...CCACGTGTAGACTTTGCGCTTGATGAAGAAGCAGATCGGAAGTAACTGCTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GCGAAGTCAGTCCTGACATTCAGCTTGTCCACAAGCTCAAAAGGAAATGACAGTCTCGATGGGCTACCTTaGTCATCTCGTATGCTCTGT +
Preference number: 4 (lower is better)
Translates to: AKSVLTFSLSTSSKGNDSLDGLP*SSRMLC
Trigger: ACAGAGCATACGAGATGACCAAGGTAGCCCATCGAG...ACTGTCATTTCCTTTTGAGCTTGTGGACAAGCTGAATGTCAGGACTGACTTCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp CCCCTCACCATGTTGAACGTCCTCATTACAGGAAGTAGCAAGCCCATATATGAACGCAAAGTCTACACGTaGACTGGAGAAAGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: PLTMLNVLITGSSKPIYERKVYT*TGERKG
Trigger: CCCTTTCCTTTCTCCAGTCCACGTGTAGACTTTGCG...TTCATATATGGGCTTGCTACTTCCTGTAATGAGGACGTTCAACATGGTGAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GGATCGGTCCTGTTTATCAGCACGTTGGTCCTTTCACAAATGGTGGTGAATCACTTTAATGGGTGCTATTaGCTGTCTTCCCCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: GSVLFISTLVLSQMVVNHFNGCY*LSSPSV
Trigger: CACTGAGGGGGAAGACAGCCAATAGCACCCATTAAA...GTGATTCACCACCATTTGTGAAAGGACCAACGTGCTGATAAACAGGACCGATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp TATGAACACGCACTGCTAAAACAATGGTGCTGTAACTGCTGCGTCCATGGCACTCGTTCAGAGCTCATGTaGATAAACCCAAAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: YEHALLKQWCCNCCVHGTRSELM*INPKPQ
Trigger: TTGGGGCTTTGGGTTTATCCACATGAGCTCTGAACG...AGTGCCATGGACGCAGCAGTTACAGCACCATTGTTTTAGCAGTGCGTGTTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp GAGGGAATCCAGGAGAGCCAGTCTCCTTCCCATGATTATCAGTTCAGTATTCACTTAGCCTCGGGGTCATaGATTTTGAAGTCTTCACTG +
Preference number: 4 (lower is better)
Translates to: EGIQESQSPSHDYQFSIHLASGS*ILKSSL
Trigger: CAGTGAAGACTTCAAAATTCATGACCCCGAGGCTAA...GTGAATACTGAACTGATAATCATGGGAAGGAGACTGGCTCTCCTGGATTCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS-3UTR TCA 90 bp TTTCTTGGGCCTGATGACAGCGTGTCTCTCTCCACCAGTGTTGAAGGAACAAGCGGGTTCCACATTGTATaGAAAAAGTGCATACTCTCT +
Preference number: 4 (lower is better)
Translates to: FLGPDDSVSLSTSVEGTSGFHIV*KKCILS
Trigger: AGAGAGTATGCACTTTTTTCATACAATGTGGAACCC...GCTTGTTCCTTCAACACTGGTGGAGAGAGACACGCTGTCATCAGGCCCAAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS-3UTR TCA 90 bp GGTCCTGTTTATCAGCACGTTGGTCCTTTCACAAATGGTGGTGAATCACCTTTAGACTGCACAGAGGCCTaGCACACATTGCTTCCTTTA +
Preference number: 4 (lower is better)
Translates to: GPVYQHVGPFTNGGESPLDCTEA*HTLLPL
Trigger: TAAAGGAAGCAATGTGTGTCAGGCCTCTGTGCAGTC...TAAAGGTGATTCACCACCATTTGTGAAAGGACCAACGTGCTGATAAACAGGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp TTCCGATCTGCTTCTTCATCAAGCGCAAAGTCTACACGTGGACTGGAGAAAGGACCCCATGAGGAATTTTaGTCAGGACGTAATATCCAG +
Preference number: 4 (lower is better)
Translates to: FRSASSSSAKSTRGLEKGPHEEF*SGRNIQ
Trigger: CTGGATATTACGTCCTGAGCAAAATTCCTCATGGGG...TCCTTTCTCCAGTCCACGTGTAGACTTTGCGCTTGATGAAGAAGCAGATCGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp AGTGCACACCTACAGCCAAGCCCTAGCATAGCTGAGTGGGAGAGAGGTTTTATTTGCATACTGAAGTTTTaGATTGCTGACTTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: SAHLQPSPSIAEWERGFICILKF*IADFWW
Trigger: CCACCAGAAGTCAGCAATGCAAAACTTCAGTATGCA...AATAAAACCTCTCTCCCACTCAGCTATGCTAGGGCTTGGCTGTAGGTGTGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp GCGAAGTCAGTCCTGACATTCAGCTTGTCCACAAGCTCAAAAGGAAATGACAGTCGGAGACCACCAGTGTaGGATGTGTGTCTTCAAAAT +
Preference number: 4 (lower is better)
Translates to: AKSVLTFSLSTSSKGNDSRRPPV*DVCLQN
Trigger: ATTTTGAAGACACACATCGCACACTGGTGGTCTCCG...ACTGTCATTTCCTTTTGAGCTTGTGGACAAGCTGAATGTCAGGACTGACTTCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp TCAGTCCTGACATTCAGCTTGTCCACAAGCTCAAAAGGAAATGACAGTAATGGAGTCCTGTCAATGTACTaGTCCTTCAGCATCGTCCGC +
Preference number: 4 (lower is better)
Translates to: SVLTFSLSTSSKGNDSNGVLSMY*SFSIVR
Trigger: GCGGACGATGCTGAAGGAGCAGTACATTGACAGGAC...TCCATTACTGTCATTTCCTTTTGAGCTTGTGGACAAGCTGAATGTCAGGACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp ATCTGCTTCTTCATCAAGCGCAAAGTCTACACGTGGACTGGAGAAAGGAAAGGGTTGATTTTCTCCCTTTaGTGGGAGGATGTAGGTGCT +
Preference number: 4 (lower is better)
Translates to: ICFFIKRKVYTWTGERKGLIFSL*WEDVGA
Trigger: AGCACCTACATCCTCCCAGCAAAGGGAGAAAATCAA...CCCTTTCCTTTCTCCAGTCCACGTGTAGACTTTGCGCTTGATGAAGAAGCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp GAGGAATCCAGGATAAGAATTACTTGTCACTGTATGAGCCAGGAAAATAATGTAGCTGGCAGCAGAGGCTaGAAGGCTCACTCGGTTGCT +
Preference number: 4 (lower is better)
Translates to: EESRIRITCHCMSQENNVAGSRG*KAHSVA
Trigger: AGCAACCGAGTGAGCCTTGCAGCCTCTGCTGCCAGC...TACATTATTTTCCTGGCTCATACAGTGACAAGTAATTCTTATCCTGGATTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS-3UTR CCA 90 bp GGGTGCTATTGGCTGTCTTCCCCCTCAGTGTTTAGGAACGTCCCCAAGACGTCTACGAGTGTTGATATATaGGTTCCACATTGTATGAAA +
Preference number: 4 (lower is better)
Translates to: GCYWLSSPSVFRNVPKTSTSVDI*VPHCMK
Trigger: TTTCATACAATGTGGAACCCATATATCAACACTCGT...AGACGTCTTGGGGACGTTCCTAAACACTGAGGGGGAAGACAGCCAATAGCACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp ATGTTGAACGTCCTCATTACAGGAAGTAGCAAGCCCATATATGAACACGCACTGTCTCACTTCCAGCCTTaGGATAGTGGTAGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: MLNVLITGSSKPIYEHALSHFQP*DSGRAS
Trigger: TGAAGCCCTACCACTATCCCAAGGCTGGAAGTGAGA...CAGTGCGTGTTCATATATGGGCTTGCTACTTCCTGTAATGAGGACGTTCAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp TCAGTCCTGACATTCAGCTTGTCCACAAGCTCAAAAGGAAATGACAGTAATGGAAGTTGCCCACCGTGTTaGCACTGTAGAGTTGTCGTC +
Preference number: 4 (lower is better)
Translates to: SVLTFSLSTSSKGNDSNGSCPPC*HCRVVV
Trigger: GACGACAACTCTACAGTGCCAACACGGTGGGCAACT...TCCATTACTGTCATTTCCTTTTGAGCTTGTGGACAAGCTGAATGTCAGGACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GGTCCTGTTTATCAGCACGTTGGTCCTTTCACAAATGGTGGTGAATCACCTTTACTCGATGGGCTACCTTaGTCATCTCGTATGCTCTGT +
Preference number: 4 (lower is better)
Translates to: GPVYQHVGPFTNGGESPLLDGLP*SSRMLC
Trigger: ACAGAGCATACGAGATGACCAAGGTAGCCCATCGAG...TAAAGGTGATTCACCACCATTTGTGAAAGGACCAACGTGCTGATAAACAGGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp CCCCTCACCATGTTGAACGTCCTCATTACAGGAAGTAGCAAGCCCATATATGAAGCACTGCTAAAACAATaGTGCTGTAACTGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: PLTMLNVLITGSSKPIYEALLKQ*CCNCCV
Trigger: GACGCAGCAGTTACAGCACCATTGTTTTAGCAGTGC...TTCATATATGGGCTTGCTACTTCCTGTAATGAGGACGTTCAACATGGTGAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp AATCACCCTAACTATAACGGACGTTCAGAGCTCATGTGGATAAACCCAAAGCCCGCACTGCTAAAACAATaGTGCTGTAACTGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: NHPNYNGRSELMWINPKPALLKQ*CCNCCV
Trigger: GACGCAGCAGTTACAGCACCATTGTTTTAGCAGTGC...GGGCTTTGGGTTTATCCACATGAGCTCTGAACGTCCGTTATAGTTAGGGTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp ATGACAGCGTGTCTCTCTCCACCAGTGTTGAAGGAACAAGCCTGTGCTGGCAGCACTTCACTTTCTTCATaGGTTCCACATTGTATGAAA +
Preference number: 4 (lower is better)
Translates to: MTACLSPPVLKEQACAGSTSLSS*VPHCMK
Trigger: TTTCATACAATGTGGAACCCATGAAGAAAGTGAAGT...GCTGCCAGCACAGGCTTGTTCCTTCAACACTGGTGGAGAGAGACACGCTGTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS-3UTR CCA 90 bp GACACAGTCGGCCAACATCACATTGTCACTCAGAGGAATCATGAGGGAATCCAGGCAATGTCAACTTCCTaGACTTCACTTTCTTCATGG +
Preference number: 4 (lower is better)
Translates to: DTVGQHHIVTQRNHEGIQAMSTS*TSLSSW
Trigger: CCATGAAGAAAGTGAAGTCCAGGAAGTTGACATTGC...CTGGATTCCCTCATGATTCCTCTGAGTGACAATGTGATGTTGGCCGACTGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS-3UTR CCA 90 bp AGGGAATCCAGGAGAGCCAGTCTCCTTCCCATGATTATCAGTTCAGTATTCACGGTAATTGGAGGCTCCTaGAGACCTCAAGTGTATATG +
Preference number: 4 (lower is better)
Translates to: RESRRASLLPMIISSVFTVIGGS*RPQVYM
Trigger: CATATACACTTGAGGTCTCCAGGAGCCTCCAATTAC...CGTGAATACTGAACTGATAATCATGGGAAGGAGACTGGCTCTCCTGGATTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS-3UTR TCA 90 bp AGGAGGGAGCAGTTACTTCCGATCTGCTTCTTCATCAAGCGCAAAGTCTACACGGTGACCTTCTTCTTTTaGGACAGACTATTATCTTCC +
Preference number: 4 (lower is better)
Translates to: RREQLLPICFFIKRKVYTVTFFF*DRLLSS
Trigger: GGAAGATAATAGTCTGTCTCAAAAGAAGAAGGTCAC...CGTGTAGACTTTGCGCTTGATGAAGAAGCAGATCGGAAGTAACTGCTCCCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp TTCCGATCTGCTTCTTCATCAAGCGCAAAGTCTACACGTGGACTGGAGAAAGGACAGAGGCATAGAGTTTaGAGTCTGTTATTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: FRSASSSSAKSTRGLEKGQRHRV*SLLLER
Trigger: TCTCTCCAATAACAGACTTCAAACTCTATGCCTCTG...TCCTTTCTCCAGTCCACGTGTAGACTTTGCGCTTGATGAAGAAGCAGATCGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp CTCATTACAGGAAGTAGCAAGCCCATATATGAACACGCACTGCTAAAACAATGGGTCGTTCAGGCCCATTaGAATAGCAAACGCACAGTC +
Preference number: 4 (lower is better)
Translates to: LITGSSKPIYEHALLKQWVVQAH*NSKRTV
Trigger: GACTGTGCGTTTGCTATTTCAATGGGCCTGAACGAC...CCATTGTTTTAGCAGTGCGTGTTCATATATGGGCTTGCTACTTCCTGTAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp TTTCTTGGGCCTGATGACAGCGTGTCTCTCTCCACCAGTGTTGAAGGAACAAGCAAAACTTCCAGAGACTaGGGTAGACAGTTAAGTATA +
Preference number: 4 (lower is better)
Translates to: FLGPDDSVSLSTSVEGTSKTSRD*GRQLSI
Trigger: TATACTTAACTGTCTACCTCAGTCTCTGGAAGTTTT...GCTTGTTCCTTCAACACTGGTGGAGAGAGACACGCTGTCATCAGGCCCAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS-3UTR GCA 90 bp TTCCGATCTGCTTCTTCATCAAGCGCAAAGTCTACACGTGGACTGGAGAAAGGAATTAGCAACAGCCTCTaGAATCGCCACAGAAACAAT +
Preference number: 4 (lower is better)
Translates to: FRSASSSSAKSTRGLEKGISNSL*NRHRNN
Trigger: ATTGTTTCTGTGGCGATTGCAGAGGCTGTTGCTAAT...TCCTTTCTCCAGTCCACGTGTAGACTTTGCGCTTGATGAAGAAGCAGATCGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332007.7
CDS-3UTR GCA 90 bp GGATCGGTCCTGTTTATCAGCACGTTGGTCCTTTCACAAATGGTGGTGAATCACTGCATACTGAAGTTTTaGATTGCTGACTTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: GSVLFISTLVLSQMVVNHCILKF*IADFWW
Trigger: CCACCAGAAGTCAGCAATGCAAAACTTCAGTATGCA...GTGATTCACCACCATTTGTGAAAGGACCAACGTGCTGATAAACAGGACCGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp TTCCGATCTGCTTCTTCATCAAGCGCAAAGTCTACACGTGGACTGGAGAAAGGATGCATACTGAAGTTTTaGATTGCTGACTTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: FRSASSSSAKSTRGLEKGCILKF*IADFWW
Trigger: CCACCAGAAGTCAGCAATGCAAAACTTCAGTATGCA...TCCTTTCTCCAGTCCACGTGTAGACTTTGCGCTTGATGAAGAAGCAGATCGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp AGGAGGGAGCAGTTACTTCCGATCTGCTTCTTCATCAAGCGCAAAGTCTACACGCTGTTTCCCGACATGTaGACAGTAGTAGATATTGTT +
Preference number: 4 (lower is better)
Translates to: RREQLLPICFFIKRKVYTLFPDM*TVVDIV
Trigger: AACAATATCTACTACTGTGCACATGTCGGGAAACAG...CGTGTAGACTTTGCGCTTGATGAAGAAGCAGATCGGAAGTAACTGCTCCCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp TCAGTCCTGACATTCAGCTTGTCCACAAGCTCAAAAGGAAATGACAGTAATGGAAAATCACACCTTCCTTaGCAGTGGAGACCACACGGA +
Preference number: 4 (lower is better)
Translates to: SVLTFSLSTSSKGNDSNGKSHLP*QWRPHG
Trigger: TCCGTGTGGTCTCCACTGGCAAGGAAGGTGTGATTT...TCCATTACTGTCATTTCCTTTTGAGCTTGTGGACAAGCTGAATGTCAGGACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp ATGTTGAACGTCCTCATTACAGGAAGTAGCAAGCCCATATATGAACACGCACTGAAAGAGCCACGTTTGTaGTTAGAGCGACCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: MLNVLITGSSKPIYEHALKEPRL*LERPEL
Trigger: AAGCTCAGGTCGCTCTAAGCACAAACGTGGCTCTTT...CAGTGCGTGTTCATATATGGGCTTGCTACTTCCTGTAATGAGGACGTTCAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR GCA 90 bp TCAGTCCTGACATTCAGCTTGTCCACAAGCTCAAAAGGAAATGACAGTAATGGATCCATCACGTTCCCCTaGATCTTAGCGGTCTTGATC +
Preference number: 4 (lower is better)
Translates to: SVLTFSLSTSSKGNDSNGSITFP*ILAVLI
Trigger: GATCAAGACCGCTAAGATGCAGGGGAACGTGATGGA...TCCATTACTGTCATTTCCTTTTGAGCTTGTGGACAAGCTGAATGTCAGGACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404039.5
CDS-3UTR GCA 90 bp TGTATGAGCCAGGAAAATAATGTAATTGGAGGCTCCTGGAGACCTCAAGTGTATGCTGTATCCATTGACTaGCGAGACATAGTCACGCAG +
Preference number: 4 (lower is better)
Translates to: CMSQENNVIGGSWRPQVYAVSID*RDIVTQ
Trigger: CTGCGTGACTATGTCTCGGCAGTCAATGGATACAGC...ATACACTTGAGGTCTCCAGGAGCCTCCAATTACATTATTTTCCTGGCTCATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS-3UTR GCA 90 bp GAGGAATCCAGGATAAGAATTACTTGTCACTGTATGAGCCAGGAAAATAATGTAGGTGAGCAGATGCGATaGCTCACACCTGCCACACTC +
Preference number: 4 (lower is better)
Translates to: EESRIRITCHCMSQENNVGEQMR*LTPATL
Trigger: GAGTGTGGCAGGTGTGAGGCATCGCATCTGCTCACC...TACATTATTTTCCTGGCTCATACAGTGACAAGTAATTCTTATCCTGGATTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS-3UTR CCA 90 bp GGATCGGTCCTGTTTATCAGCACGTTGGTCCTTTCACAAATGGTGGTGAATCACACTATTATCTTCCGCTaGTGTCAGAAGTATGACCGA +
Preference number: 4 (lower is better)
Translates to: GSVLFISTLVLSQMVVNHTIIFR*CQKYDR
Trigger: TCGGTCATACTTCTGACACCAGCGGAAGATAATAGT...GTGATTCACCACCATTTGTGAAAGGACCAACGTGCTGATAAACAGGACCGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
3UTR CAA 72 bp GATATTCTGAAGAAGACACAGTCGGCCAACATCACATaGTCACTCAGAGGAATCATGAGGGAATCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: DILKKTQSANIT*SLRGIMRESRR
Trigger: TCTCCTGGATTCCCTCATGATTCCTCTGAGTGACAATGTGATGTTGGCCGACTGTGTCTTCTTCAGAATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS-3UTR TCA 90 bp TTCCGATCTGCTTCTTCATCAAGCGCAAAGTCTACACGTGGACTGGAGAAAGGAGTGACCTTCTTCTTTTaGGACAGACTATTATCTTCC +
Preference number: 4 (lower is better)
Translates to: FRSASSSSAKSTRGLEKGVTFFF*DRLLSS
Trigger: GGAAGATAATAGTCTGTCTCAAAAGAAGAAGGTCAC...TCCTTTCTCCAGTCCACGTGTAGACTTTGCGCTTGATGAAGAAGCAGATCGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp TTATCAGTTCAGTATTCACGAGGGTCCATTGCTGCATCTCTGAGAACAGGCCATGTGTATATGATATTCTaGAGAAGACACAGTCGGCCA +
Preference number: 4 (lower is better)
Translates to: LSVQYSRGSIAASLRTGHVYMIF*RRHSRP
Trigger: TGGCCGACTGTGTCTTCTTCAGAATATCATATACAC...ATGGCCTGTTCTCAGAGATGCAGCAATGGACCCTCGTGAATACTGAACTGATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS-3UTR TCA 90 bp GACACAGTCGGCCAACATCACATTGTCACTCAGAGGAATCATGAGGGAATCCAGGACCTCAAGTGTATATaGTATTCTGAAGAAGACACA +
Preference number: 4 (lower is better)
Translates to: DTVGQHHIVTQRNHEGIQDLKCI*YSEEDT
Trigger: TGTGTCTTCTTCAGAATATCATATACACTTGAGGTC...CTGGATTCCCTCATGATTCCTCTGAGTGACAATGTGATGTTGGCCGACTGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS-3UTR GCA 90 bp AATCACCCTAACTATAACGGACGTTCAGAGCTCATGTGGATAAACCCAAAGCCCTTATCTGTTGTGTTGTaGACCGTCACCATAGGAACA +
Preference number: 4 (lower is better)
Translates to: NHPNYNGRSELMWINPKPLSVVL*TVTIGT
Trigger: TGTTCCTATGGTGACGGTGCACAACACAACAGATAA...GGGCTTTGGGTTTATCCACATGAGCTCTGAACGTCCGTTATAGTTAGGGTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp TTATCAGTTCAGTATTCACGAGGGTCCATTGCTGCATCTCTGAGAACAGGCCATACTATTATCTTCCGCTaGTGTCAGAAGTATGACCGA +
Preference number: 4 (lower is better)
Translates to: LSVQYSRGSIAASLRTGHTIIFR*CQKYDR
Trigger: TCGGTCATACTTCTGACACCAGCGGAAGATAATAGT...ATGGCCTGTTCTCAGAGATGCAGCAATGGACCCTCGTGAATACTGAACTGATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS-3UTR CCA 90 bp CCCCTCACCATGTTGAACGTCCTCATTACAGGAAGTAGCAAGCCCATATATGAAGCTTCAGTATCTGCATaGGCAGGTTGTAATCATCAA +
Preference number: 4 (lower is better)
Translates to: PLTMLNVLITGSSKPIYEASVSA*AGCNHQ
Trigger: TTGATGATTACAACCTGCCCATGCAGATACTGAAGC...TTCATATATGGGCTTGCTACTTCCTGTAATGAGGACGTTCAACATGGTGAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp ATGTTGAACGTCCTCATTACAGGAAGTAGCAAGCCCATATATGAACACGCACTGTTTGAAGTCTGTTATTaGAGAGAGAGCAGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: MLNVLITGSSKPIYEHALFEVCY*RESRAA
Trigger: TGCGGCTCTGCTCTCTCTCCAATAACAGACTTCAAA...CAGTGCGTGTTCATATATGGGCTTGCTACTTCCTGTAATGAGGACGTTCAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp TGTATGAGCCAGGAAAATAATGTAATTGGAGGCTCCTGGAGACCTCAAGTGTATTTGTACATGGCAAGCTaGCAATGCTGTGCTGTATCC +
Preference number: 4 (lower is better)
Translates to: CMSQENNVIGGSWRPQVYLYMAS*QCCAVS
Trigger: GGATACAGCACAGCATTGCCAGCTTGCCATGTACAA...ATACACTTGAGGTCTCCAGGAGCCTCCAATTACATTATTTTCCTGGCTCATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS-3UTR TCA 90 bp TCAAGTGTATATGATATTCTGAAGAAGACACAGTCGGCCAACATCACATTGTCACTGTGCTGTATCCATTaGCTGCCGAGACATAGTCAC +
Preference number: 4 (lower is better)
Translates to: SSVYDILKKTQSANITLSLCCIH*LPRHSH
Trigger: GTGACTATGTCTCGGCAGTCAATGGATACAGCACAG...TGACAATGTGATGTTGGCCGACTGTGTCTTCTTCAGAATATCATATACACTTGA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS-3UTR TCA 90 bp ATGTTGAACGTCCTCATTACAGGAAGTAGCAAGCCCATATATGAACACGCACTGGGGTTCCACATTGTATaGAAAAAGTGCATACTCTCT +
Preference number: 4 (lower is better)
Translates to: MLNVLITGSSKPIYEHALGFHIV*KKCILS
Trigger: AGAGAGTATGCACTTTTTTCATACAATGTGGAACCC...CAGTGCGTGTTCATATATGGGCTTGCTACTTCCTGTAATGAGGACGTTCAACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR TCA 90 bp TGTATGAGCCAGGAAAATAATGTAATTGGAGGCTCCTGGAGACCTCAAGTGTATCCAGTCTCCTTCCCATaGTTATCAGTTCAGTATTCA +
Preference number: 4 (lower is better)
Translates to: CMSQENNVIGGSWRPQVYPVSFP*LSVQYS
Trigger: TGAATACTGAACTGATAATCATGGGAAGGAGACTGG...ATACACTTGAGGTCTCCAGGAGCCTCCAATTACATTATTTTCCTGGCTCATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS-3UTR GCA 90 bp CTCATTACAGGAAGTAGCAAGCCCATATATGAACACGCACTGCTAAAACAATGGTTATCTGTTGTGTTGTaGACCGTCACCATAGGAACA +
Preference number: 4 (lower is better)
Translates to: LITGSSKPIYEHALLKQWLSVVL*TVTIGT
Trigger: TGTTCCTATGGTGACGGTGCACAACACAACAGATAA...CCATTGTTTTAGCAGTGCGTGTTCATATATGGGCTTGCTACTTCCTGTAATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp ATCTGCTTCTTCATCAAGCGCAAAGTCTACACGTGGACTGGAGAAAGGAAAGGGACGAGTGTTGATATATaGGTTCCACATTGTATGAAA +
Preference number: 4 (lower is better)
Translates to: ICFFIKRKVYTWTGERKGTSVDI*VPHCMK
Trigger: TTTCATACAATGTGGAACCCATATATCAACACTCGT...CCCTTTCCTTTCTCCAGTCCACGTGTAGACTTTGCGCTTGATGAAGAAGCAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CCA 90 bp GGTCCTGTTTATCAGCACGTTGGTCCTTTCACAAATGGTGGTGAATCACCTTTAGCAATCAACTCTTTTTaGCCGCTACCAATAAAGAAA +
Preference number: 4 (lower is better)
Translates to: GPVYQHVGPFTNGGESPLAINSF*PLPIKK
Trigger: TTTCTTTATTGGTAGCGGCCAAAAAGAGTTGATTGC...TAAAGGTGATTCACCACCATTTGTGAAAGGACCAACGTGCTGATAAACAGGACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404039.5
CDS-3UTR CAA 90 bp GGTCTCTCGGGCGCCGGGAGGAGGCGCTGCTGCGGGGACAGCGTTGTCCCTGGTCAGGAGCTTGGTCCCTaGGAAGCCGCTGCCACGGCC +
Preference number: 5 (lower is better)
Translates to: GLSGAGRRRCCGDSVVPGQELGP*EAAATA
Trigger: GGCCGTGGCAGCGGCTTCCAAGGGACCAAGCTCCTG...ACCAGGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGCGCCCGAGAGACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp GGTCTCTCGGGCGCCGGGAGGAGGCGCTGCTGCGGGGACAGCGTTGTCCCTGGTCCTTTGCTCTGTTCCTaGGGGGAGGGGCCGTGGCGT +
Preference number: 5 (lower is better)
Translates to: GLSGAGRRRCCGDSVVPGPLLCS*GEGPWR
Trigger: ACGCCACGGCCCCTCCCCCAAGGAACAGAGCAAAGG...ACCAGGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGCGCCCGAGAGACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS TCA 90 bp GAGGAAGAGGCTGCGAGCCCAGCTAGCGAGGGCGAGAGGCAGCTCTaGCTGCGCGCGTGTCCACCGAGCTCGGCGCCAGCACACTGCGAG +
Preference number: 5 (lower is better)
Translates to: EEEAASPASEGERQL*LRACPPSSAPAHCE
Trigger: CTCGCAGTGTGCTGGCGCCGAGCTCGGTGGACACGCGCGCAGTCAGAGCTGCCTCTCGCCCTCGCTAGCTGGGCTCGCAGCCTCTTCCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404039.5
CDS GCA 90 bp AAGAGGCTGCGAGCCCAGCTAGCGAGGGCGAGAGGCAGCTCTGACTaGGCGCGTGTCCACCGAGCTCGGCGCCAGCACACTGCGAGCAAC +
Preference number: 5 (lower is better)
Translates to: KRLRAQLARARGSSD*ARVHRARRQHTASN
Trigger: GTTGCTCGCAGTGTGCTGGCGCCGAGCTCGGTGGACACGCGCGCAGTCAGAGCTGCCTCTCGCCCTCGCTAGCTGGGCTCGCAGCCTCTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404039.5
CDS-3UTR CAA 90 bp GCGCCGGGAGGAGGCGCTGCTGCGGGGACAGCGTTGTCCCTGGTGCCATGGAGGTTGTCGTTGCTGCTGTaGGGCTGGGACGAGGACACC +
Preference number: 5 (lower is better)
Translates to: APGGGAAAGTALSLVPWRLSLLL*GWDEDT
Trigger: GGTGTCCTCGTCCCAGCCCAACAGCAGCAACGACAA...CCTCCATGGCACCAGGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp AGAGGGATGCGCGCAGGCCCACAGAACCCTCAGGACTCCCGTGGCCCGAGCACACAGGAGCTTGGTCCCTaGGAAGCCGCTGCCACGGCC +
Preference number: 5 (lower is better)
Translates to: RGMRAGPQNPQDSRGPSTQELGP*EAAATA
Trigger: GGCCGTGGCAGCGGCTTCCAAGGGACCAAGCTCCTG...TGTGCTCGGGCCACGGGAGTCCTGAGGGTTCTGTGGGCCTGCGCGCATCCCTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS GCA 90 bp GCCGCCGCCTCACTTCGTGCAGGAGCTTGGTCCCTTGGAAGCCGCTaGCACGGCCGTCACACTTTACCACCACCGCGCCGTGGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: AAASLRAGAWSLGSR*HGRHTLPPPRRGCS
Trigger: TGAGCAGCCACGGCGCGGTGGTGGTAAAGTGTGACGGCCGTGGCAGCGGCTTCCAAGGGACCAAGCTCCTGCACGAAGTGAGGCGGCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
ENST00000427557.1
ENST00000479637.1
ENST00000484789.5
ENST00000488512.5
CDS CCA 90 bp AGCAAGCCCAGCCGCCGCCTCACTTCGTGCAGGAGCTTGGTCCCTTaGAAGCCGCTGCCACGGCCGTCACACTTTACCACCACCGCGCCG +
Preference number: 5 (lower is better)
Translates to: SKPSRRLTSCRSLVP*KPLPRPSHFTTTAP
Trigger: CGGCGCGGTGGTGGTAAAGTGTGACGGCCGTGGCAGCGGCTTCCAAGGGACCAAGCTCCTGCACGAAGTGAGGCGGCGGCTGGGCTTGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
ENST00000427557.1
ENST00000479637.1
ENST00000484789.5
ENST00000488512.5
CDS CCA 90 bp CCTGCTGCTGCACGGATTTCCCCGAAGCGCTTGGCTCCTTGGCTGTaGTCATGGTCTGTCCAGGCGCTTCCCACCACCGGGGCAGGTGGG +
Preference number: 5 (lower is better)
Translates to: PAAARISPKRLAPWL*SWSVQALPTTGAGG
Trigger: CCCACCTGCCCCGGTGGTGGGAAGCGCCTGGACAGACCATGACCACAGCCAAGGAGCCAAGCGCTTCGGGGAAATCCGTGCAGCAGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000332007.7
ENST00000427557.1
ENST00000462622.5
ENST00000496611.1
ENST00000619756.4
CDS TCA 90 bp CCTCGTGTTTCTTCGTGCAGACCCCCGTGGTGGCGTCGCAGAGGGTaGGGATGGACACGTTCTGCGCCCGGTTCAGCCAGGTCACGGCGA +
Preference number: 5 (lower is better)
Translates to: PRVSSCRPPWWRRRG*GWTRSAPGSARSRR
Trigger: TCGCCGTGACCTGGCTGAACCGGGCGCAGAACGTGTCCATCCTCACCCTCTGCGACGCCACCACGGGGGTCTGCACGAAGAAACACGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
ENST00000427557.1
ENST00000471100.5
ENST00000478614.1
ENST00000481593.1
CDS TCA 90 bp TTCTCCTGGAGCTCTCTGGGCAACCCTGGAGAACGGGAGGCACCGTaGGTGGAGCCGGCACGCCGTCTGTTTCTGCCTGGGGAGCCCTGT +
Preference number: 5 (lower is better)
Translates to: FSWSSLGNPGEREAP*VEPARRLFLPGEPC
Trigger: ACAGGGCTCCCCAGGCAGAAACAGACGGCGTGCCGGCTCCACTCACGGTGCCTCCCGTTCTCCAGGGTTGCCCAGAGAGCTCCAGGAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481593.1
CDS GCA 90 bp ATCTGGTCCTTCTCCTCCAGCAAGCCCAGCCGCCGCCTCACTTCGTaGAGGAGCTTGGTCCCTTGGAAGCCGCTGCCACGGCCGTCACAC +
Preference number: 5 (lower is better)
Translates to: IWSFSSSKPSRRLTS*RSLVPWKPLPRPSH
Trigger: GTGTGACGGCCGTGGCAGCGGCTTCCAAGGGACCAAGCTCCTGCACGAAGTGAGGCGGCGGCTGGGCTTGCTGGAGGAGAAGGACCAGAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
ENST00000427557.1
ENST00000479637.1
ENST00000484789.5
ENST00000488512.5
CDS TCA 90 bp TCATGGTCTGTCCAGGCGCTTCCCACCACCGGGGCAGGTGGGGTCTaGCGGCGAGTTGGGAGCCACCAGAGTCCAAGCGGTAAGGTAAGG +
Preference number: 5 (lower is better)
Translates to: SWSVQALPTTGAGGV*RRVGSHQSPSGKVR
Trigger: CCTTACCTTACCGCTTGGACTCTGGTGGCTCCCAACTCGCCGTCAGACCCCACCTGCCCCGGTGGTGGGAAGCGCCTGGACAGACCATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332007.7
ENST00000462622.5
ENST00000496611.1
ENST00000619756.4
CDS TCA 90 bp TCCACACTGGGGTCCAACTCCCTTCTGGCTGGAGCTCTCCCTGCCTaGTCAAGCCCACAGGTGGTCCCTCCCTCCCACAGGCAGGGATGC +
Preference number: 5 (lower is better)
Translates to: STLGSNSLLAGALPA*SSPQVVPPSHRQGC
Trigger: GCATCCCTGCCTGTGGGAGGGAGGGACCACCTGTGGGCTTGATCAGGCAGGGAGAGCTCCAGCCAGAAGGGAGTTGGACCCCAGTGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS GCA 90 bp AGCCGCTGCCACGGCCGTCACACTTTACCACCACCGCGCCGTGGCTaGTCACCATCACCGTCTCCCAGCTCACCTCGAACTTCTCAGCCA +
Preference number: 5 (lower is better)
Translates to: SRCHGRHTLPPPRRG*SPSPSPSSPRTSQP
Trigger: TGGCTGAGAAGTTCGAGGTGAGCTGGGAGACGGTGATGGTGAGCAGCCACGGCGCGGTGGTGGTAAAGTGTGACGGCCGTGGCAGCGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
ENST00000427557.1
ENST00000479637.1
ENST00000484789.5
ENST00000488512.5
CDS-3UTR CAA 90 bp GGTCTCTCGGGCGCCGGGAGGAGGCGCTGCTGCGGGGACAGCGTTGTCCCTGGTCGTCTGAAGACAACCTaGAGGAGGGAGCAGTTACTT +
Preference number: 5 (lower is better)
Translates to: GLSGAGRRRCCGDSVVPGRLKTT*RREQLL
Trigger: AAGTAACTGCTCCCTCCTCAAGGTTGTCTTCAGACG...ACCAGGGACAACGCTGTCCCCGCAGCAGCGCCTCCTCCCGGCGCCCGAGAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS GCA 90 bp CTCCTTGCCTGCTCAGTGCCTTCAAGGCTGGATGCTCAGACGAGCTaGAGCCTCCGAAGGGAAGACCCCGAGGGAAACGGGACAGCACGG +
Preference number: 5 (lower is better)
Translates to: LLACSVPSRLDAQTS*SLRREDPEGNGTAR
Trigger: CCGTGCTGTCCCGTTTCCCTCGGGGTCTTCCCTTCGGAGGCTGCAGCTCGTCTGAGCATCCAGCCTTGAAGGCACTGAGCAGGCAAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS CCA 90 bp TGGAAGCCGCTGCCACGGCCGTCACACTTTACCACCACCGCGCCGTaGCTGCTCACCATCACCGTCTCCCAGCTCACCTCGAACTTCTCA +
Preference number: 5 (lower is better)
Translates to: WKPLPRPSHFTTTAP*LLTITVSQLTSNFS
Trigger: TGAGAAGTTCGAGGTGAGCTGGGAGACGGTGATGGTGAGCAGCCACGGCGCGGTGGTGGTAAAGTGTGACGGCCGTGGCAGCGGCTTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
ENST00000427557.1
ENST00000479637.1
ENST00000484789.5
ENST00000488512.5
CDS CCA 90 bp ACCCTCCCTGGAACTTGGATTCTCCTGGAGCTCTCTGGGCAACCCTaGAGAACGGGAGGCACCGTGAGTGGAGCCGGCACGCCGTCTGTT +
Preference number: 5 (lower is better)
Translates to: TLPGTWILLELSGQP*RTGGTVSGAGTPSV
Trigger: AACAGACGGCGTGCCGGCTCCACTCACGGTGCCTCCCGTTCTCCAGGGTTGCCCAGAGAGCTCCAGGAGAATCCAAGTTCCAGGGAGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481593.1
CDS TCA 90 bp CCTTTGCTGTGCCCACATGTGTGTCCCTGGGTGGGTCCTGCTCCCTaGTACCCATGGAGCCTGCAGCGATGCAGGCTGCTCTGTACCTGG +
Preference number: 5 (lower is better)
Translates to: PLLCPHVCPWVGPAP*YPWSLQRCRLLCTW
Trigger: CCAGGTACAGAGCAGCCTGCATCGCTGCAGGCTCCATGGGTATCAGGGAGCAGGACCCACCCAGGGACACACATGTGGGCACAGCAAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS GCA 90 bp TCTGAGGGAGGGGCCAACAAGTGGCTTAGGGCGCAAGTCCTGGTCTaGACATGCTCAGCACAAGGCCGACACGAGACAGACGCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: SEGGANKWLRAQVLV*TCSAQGRHETDAPR
Trigger: CCTGGGAGCGTCTGTCTCGTGTCGGCCTTGTGCTGAGCATGTGCAGACCAGGACTTGCGCCCTAAGCCACTTGTTGGCCCCTCCCTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS GCA 90 bp GTGAAGGCCTTTGCTGTGCCCACATGTGTGTCCCTGGGTGGGTCCTaGTCCCTGATACCCATGGAGCCTGCAGCGATGCAGGCTGCTCTG +
Preference number: 5 (lower is better)
Translates to: VKAFAVPTCVSLGGS*SLIPMEPAAMQAAL
Trigger: CAGAGCAGCCTGCATCGCTGCAGGCTCCATGGGTATCAGGGAGCAGGACCCACCCAGGGACACACATGTGGGCACAGCAAAGGCCTTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS CCA 90 bp CTTCTGCCCCTCTTCATCCACACTGGGGTCCAACTCCCTTCTGGCTaGAGCTCTCCCTGCCTGATCAAGCCCACAGGTGGTCCCTCCCTC +
Preference number: 5 (lower is better)
Translates to: LLPLFIHTGVQLPSG*SSPCLIKPTGGPSL
Trigger: GAGGGAGGGACCACCTGTGGGCTTGATCAGGCAGGGAGAGCTCCAGCCAGAAGGGAGTTGGACCCCAGTGTGGATGAAGAGGGGCAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS CCA 90 bp GGTGTCTGTGAAGGCCTTTGCTGTGCCCACATGTGTGTCCCTGGGTaGGTCCTGCTCCCTGATACCCATGGAGCCTGCAGCGATGCAGGC +
Preference number: 5 (lower is better)
Translates to: GVCEGLCCAHMCVPG*VLLPDTHGACSDAG
Trigger: GCCTGCATCGCTGCAGGCTCCATGGGTATCAGGGAGCAGGACCCACCCAGGGACACACATGTGGGCACAGCAAAGGCCTTCACAGACACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS-3UTR CAA 90 bp GCTAGTGTGGGCGGGTCTCATGCTTCCGCTTGGTGGCTGGAATCTAGGGGCCGGGACTGGATGTTGTCGTaGCTGCTGTTGGGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: ASVGGSHASAWWLESRGRDWMLS*LLLGWD
Trigger: GTCCCAGCCCAACAGCAGCAACGACAACATCCAGTC...CCGGCCCCTAGATTCCAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp CTGCGTCCATGGCACTGCGACGTGAGACAGGGTGTGATGTCCCTAACGGGAACACCTTTGCTCTGTTCCTaGGGGGAGGGGCCGTGGCGT +
Preference number: 5 (lower is better)
Translates to: LRPWHCDVRQGVMSLTGTPLLCS*GEGPWR
Trigger: ACGCCACGGCCCCTCCCCCAAGGAACAGAGCAAAGG...TGTTCCCGTTAGGGACATCACACCCTGTCTCACGTCGCAGTGCCATGGACGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS TCA 90 bp CAGGCCGGGCATCGCTCTGGATTTGCAGTTGTCCTTCAGACCGCATaGGGGCAGGCGGCTGAGCAGCGCCATGCAATGACCACATGTCTG +
Preference number: 5 (lower is better)
Translates to: QAGHRSGFAVVLQTA*GQAAEQRHAMTTCL
Trigger: CAGACATGTGGTCATTGCATGGCGCTGCTCAGCCGCCTGCCCTCATGCGGTCTGAAGGACAACTGCAAATCCAGAGCGATGCCCGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493268.1
CDS GCA 90 bp GGAGGGGCCAACAAGTGGCTTAGGGCGCAAGTCCTGGTCTGCACATaGTCAGCACAAGGCCGACACGAGACAGACGCTCCCAGGTGTTCT +
Preference number: 5 (lower is better)
Translates to: GGANKWLRAQVLVCT*SAQGRHETDAPRCS
Trigger: AGAACACCTGGGAGCGTCTGTCTCGTGTCGGCCTTGTGCTGAGCATGTGCAGACCAGGACTTGCGCCCTAAGCCACTTGTTGGCCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS CCA 90 bp GCCGGAGCCAGTGGTGACACAGCCAGCCTGCGAGCTTCTGAAATCTaGCTTATAAAGAATCTGCACTGGCGCGGGACTCTGAGGGGCCGC +
Preference number: 5 (lower is better)
Translates to: AGASGDTASLRASEI*LIKNLHWRGTLRGR
Trigger: GCGGCCCCTCAGAGTCCCGCGCCAGTGCAGATTCTTTATAAGCCAGATTTCAGAAGCTCGCAGGCTGGCTGTGTCACCACTGGCTCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478614.1
CDS-3UTR CAA 90 bp AACACAGAGGCTAGTGTGGGCGGGTCTCATGCTTCCGCTTGGTGGCTGGAATCTCAGGTCACGGCGACCTaGGTGCTGGTGGCCCACTTC +
Preference number: 5 (lower is better)
Translates to: NTEASVGGSHASAWWLESQVTAT*VLVAHF
Trigger: GAAGTGGGCCACCAGCACCAAGGTCGCCGTGACCTG...AGATTCCAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGCCTCTGTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp AACGGGAACACAGAGGCTAGTGTGGGCGGGTCTCATGCTTCCGCTTGGTGGCTGTTGTCGTTGCTGCTGTaGGGCTGGGACGAGGACACC +
Preference number: 5 (lower is better)
Translates to: NGNTEASVGGSHASAWWLLSLLL*GWDEDT
Trigger: GGTGTCCTCGTCCCAGCCCAACAGCAGCAACGACAA...CAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGCCTCTGTGTTCCCGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp CTTCCGCTTGGTGGCTGGAATCTAGGGGCCGGTGTCCTGTGGGCTCGCGTGGGGCTTGATTTTCTCCCTTaGCTGGGAGGATGTAGGTGC +
Preference number: 5 (lower is better)
Translates to: LPLGGWNLGAGVLWARVGLDFLP*LGGCRC
Trigger: GCACCTACATCCTCCCAGCAAAGGGAGAAAATCAAG...CCCCACGCGAGCCCACAGGACACCGGCCCCTAGATTCCAGCCACCAAGCGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp CGGGGAAGGAGCTTGTTTCCCAAGCAAAACTGCCTTCCGCATCCGAGACACACAGCTGCGGGGACAGCGTaGTCCCTGGTGCCATGGAGG +
Preference number: 5 (lower is better)
Translates to: RGRSLFPKQNCLPHPRHTAAGTA*SLVPWR
Trigger: CCTCCATGGCACCAGGGACAACGCTGTCCCCGCAGC...TGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGGGAAACAAGCTCCTTCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS TCA 90 bp ATGCCTCACACCTGCCACACTCGTATGACAATGGACAGTGCTGCCTaGGGGCTGCAGGTGCATGGCTGCGAAGCCTGGTGCCATTGGCAG +
Preference number: 5 (lower is better)
Translates to: MPHTCHTRMTMDSAA*GLQVHGCEAWCHWQ
Trigger: CTGCCAATGGCACCAGGCTTCGCAGCCATGCACCTGCAGCCCTCAGGCAGCACTGTCCATTGTCATACGAGTGTGGCAGGTGTGAGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406326.5
ENST00000619756.4
CDS TCA 90 bp TTGACTTTCACACCGCAGTACCAGGCAAACGCACAACTAACCACCTaGCCGGGCAGCGAGGGGTCCGGGGAGGCGGGACAGAGAAAGAAC +
Preference number: 5 (lower is better)
Translates to: LTFTPQYQANAQLTT*PGSEGSGEAGQRKN
Trigger: GTTCTTTCTCTGTCCCGCCTCCCCGGACCCCTCGCTGCCCGGTCAGGTGGTTAGTTGTGCGTTTGCCTGGTACTGCGGTGTGAAAGTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471100.5
CDS TCA 90 bp TCCTTCAGACCGCATGAGGGCAGGCGGCTGAGCAGCGCCATGCAATaGCCACATGTCTGGAAGAACAGGCTCTGTTGGAGCCGCACTGCT +
Preference number: 5 (lower is better)
Translates to: SFRPHEGRRLSSAMQ*PHVWKNRLCWSRTA
Trigger: AGCAGTGCGGCTCCAACAGAGCCTGTTCTTCCAGACATGTGGTCATTGCATGGCGCTGCTCAGCCGCCTGCCCTCATGCGGTCTGAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493268.1
CDS GCA 90 bp TGCGATGCCTCACACCTGCCACACTCGTATGACAATGGACAGTGCTaGCTGAGGGCTGCAGGTGCATGGCTGCGAAGCCTGGTGCCATTG +
Preference number: 5 (lower is better)
Translates to: CDASHLPHSYDNGQC*LRAAGAWLRSLVPL
Trigger: CAATGGCACCAGGCTTCGCAGCCATGCACCTGCAGCCCTCAGGCAGCACTGTCCATTGTCATACGAGTGTGGCAGGTGTGAGGCATCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406326.5
ENST00000619756.4
CDS GCA 90 bp AGATGCGATGCCTCACACCTGCCACACTCGTATGACAATGGACAGTaGTGCCTGAGGGCTGCAGGTGCATGGCTGCGAAGCCTGGTGCCA +
Preference number: 5 (lower is better)
Translates to: RCDASHLPHSYDNGQ*CLRAAGAWLRSLVP
Trigger: TGGCACCAGGCTTCGCAGCCATGCACCTGCAGCCCTCAGGCAGCACTGTCCATTGTCATACGAGTGTGGCAGGTGTGAGGCATCGCATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406326.5
ENST00000619756.4
CDS GCA 90 bp TACTGCAACGCAGGCCTCCCCAGAGAAAAGCCCTACCTCCTTGCCTaGTCAGTGCCTTCAAGGCTGGATGCTCAGACGAGCTGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: YCNAGLPREKPYLLA*SVPSRLDAQTSCSL
Trigger: GAGGCTGCAGCTCGTCTGAGCATCCAGCCTTGAAGGCACTGAGCAGGCAAGGAGGTAGGGCTTTTCTCTGGGGAGGCCTGCGTTGCAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS GCA 90 bp AGCCCTGGGGTGGATCAGGTGGAGGTGACAGTGGGGACCCGGACATaGAGTAGTTACCTGTCTGTGGAGCCAGGCCTCACTTTCATCCTC +
Preference number: 5 (lower is better)
Translates to: SPGVDQVEVTVGTRT*SSYLSVEPGLTFIL
Trigger: GAGGATGAAAGTGAGGCCTGGCTCCACAGACAGGTAACTACTGCATGTCCGGGTCCCCACTGTCACCTCCACCTGATCCACCCCAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481593.1
CDS CCA 90 bp AGGTGCATGGCTGCGAAGCCTGGTGCCATTGGCAGTCCTGCCTCCTaGGACTCTCCTGCAATCCTCCAGCCAGGGTCTCCATGGAATATC +
Preference number: 5 (lower is better)
Translates to: RCMAAKPGAIGSPAS*DSPAILQPGSPWNI
Trigger: GATATTCCATGGAGACCCTGGCTGGAGGATTGCAGGAGAGTCCCAGGAGGCAGGACTGCCAATGGCACCAGGCTTCGCAGCCATGCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406326.5
ENST00000619756.4
CDS CCA 90 bp GACAGCGTGTCTCTCTCCACCAGTGTTGAAGGAACAAGCCTGTGCTaGCAGCAGAGGCTGCAAGGCTCACTCGGTTGCTCTCTGGCCCGA +
Preference number: 5 (lower is better)
Translates to: DSVSLSTSVEGTSLC*QQRLQGSLGCSLAR
Trigger: TCGGGCCAGAGAGCAACCGAGTGAGCCTTGCAGCCTCTGCTGCCAGCACAGGCTTGTTCCTTCAACACTGGTGGAGAGAGACACGCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS CCA 90 bp AGATGGCCCCAGGACATCCTGCTAGTGCGTAGTAACATGTGGTGTTaGTCAGAGGGAAGCAGTGGGGCAAGGCTCAGGGCCCACCAGCAC +
Preference number: 5 (lower is better)
Translates to: RWPQDILLVRSNMWC*SEGSSGARLRAHQH
Trigger: GTGCTGGTGGGCCCTGAGCCTTGCCCCACTGCTTCCCTCTGACCAACACCACATGTTACTACGCACTAGCAGGATGTCCTGGGGCCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS-3UTR CAA 90 bp AACGGGAACACAGAGGCTAGTGTGGGCGGGTCTCATGCTTCCGCTTGGTGGCTGGAAGCGCTTGGCTCCTaGGCTGTGGTCATGGTCTGT +
Preference number: 5 (lower is better)
Translates to: NGNTEASVGGSHASAWWLEALGS*AVVMVC
Trigger: ACAGACCATGACCACAGCCAAGGAGCCAAGCGCTTC...CAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGCCTCTGTGTTCCCGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332007.7
CDS-3UTR CAA 90 bp GCTAGTGTGGGCGGGTCTCATGCTTCCGCTTGGTGGCTGGAATCTAGGGGCCGGTGGTGGGTCCAGACTTaGAGGATCCCCATGAGGAAT +
Preference number: 5 (lower is better)
Translates to: ASVGGSHASAWWLESRGRWWVQT*RIPMRN
Trigger: ATTCCTCATGGGGATCCTCAAAGTCTGGACCCACCA...CCGGCCCCTAGATTCCAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp CACATCCCCACTTCCCTCCGACCAGATGTCGTGGCCAGAGCTGGCTTCCCCTTCGTGATGGACTGGATGTaGTCGTTGCTGCTGTTGGGC +
Preference number: 5 (lower is better)
Translates to: HIPTSLRPDVVARAGFPFVMDWM*SLLLLG
Trigger: GCCCAACAGCAGCAACGACAACATCCAGTCCATCAC...GAAGGGGAAGCCAGCTCTGGCCACGACATCTGGTCGGAGGGAAGTGGGGATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp AACGGGAACACAGAGGCTAGTGTGGGCGGGTCTCATGCTTCCGCTTGGTGGCTGGTTGGCACTGTAGAGTaGTCGTCTCCGAGGCAGGTC +
Preference number: 5 (lower is better)
Translates to: NGNTEASVGGSHASAWWLVGTVE*SSPRQV
Trigger: GACCTGCCTCGGAGACGACAACTCTACAGTGCCAAC...CAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGCCTCTGTGTTCCCGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp GCGTCCATGGCACTGCGACGTGAGACAGGGTGTGATGTCCCTAACGGGAACACAACTTCGTGCAGGAGCTaGGTCCCTTGGAAGCCGCTG +
Preference number: 5 (lower is better)
Translates to: ASMALRRETGCDVPNGNTTSCRS*VPWKPL
Trigger: CAGCGGCTTCCAAGGGACCAAGCTCCTGCACGAAGT...TGTGTTCCCGTTAGGGACATCACACCCTGTCTCACGTCGCAGTGCCATGGACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp GCTAGTGTGGGCGGGTCTCATGCTTCCGCTTGGTGGCTGGAATCTAGGGGCCGGATCTCGTATGCTCTGTaGTCAAGTCCATGGAGGCCC +
Preference number: 5 (lower is better)
Translates to: ASVGGSHASAWWLESRGRISYAL*SSPWRP
Trigger: GGGCCTCCATGGACTTGACAACAGAGCATACGAGAT...CCGGCCCCTAGATTCCAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp AGAGGGATGCGCGCAGGCCCACAGAACCCTCAGGACTCCCGTGGCCCGAGCACACATTCCACGAAGAAGTaGATGATGGACCGGTACAGA +
Preference number: 5 (lower is better)
Translates to: RGMRAGPQNPQDSRGPSTHSTKK*MMDRYR
Trigger: TCTGTACCGGTCCATCATCAACTTCTTCGTGGAATG...TGTGCTCGGGCCACGGGAGTCCTGAGGGTTCTGTGGGCCTGCGCGCATCCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS TCA 90 bp TCTCATCGTAGGCTAGGATCTTGGTCACGTCCCAGTCCCCGGAGGTaGTGGACTGGATGTTGTCGTTGCTGCTGTTGGGCTGGGACGAGG +
Preference number: 5 (lower is better)
Translates to: SHRRLGSWSRPSPRR*WTGCCRCCCWAGTR
Trigger: CCTCGTCCCAGCCCAACAGCAGCAACGACAACATCCAGTCCATCACCTCCGGGGACTGGGACGTGACCAAGATCCTAGCCTACGATGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
ENST00000427557.1
CDS TCA 90 bp AAGCGCAGAGAGAAGACAGTTAGGAGTCCTGGCAGTAACTCAGCATaGAGCAGCCTCGGGCAGGGAGACAGCCCCAGAGCAGCCAGTTCC +
Preference number: 5 (lower is better)
Translates to: KRREKTVRSPGSNSA*SSLGQGDSPRAASS
Trigger: GGAACTGGCTGCTCTGGGGCTGTCTCCCTGCCCGAGGCTGCTTCATGCTGAGTTACTGCCAGGACTCCTAACTGTCTTCTCTCTGCGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS GCA 90 bp GGAACAAGCCTGTGCTGGCAGCAGAGGCTGCAAGGCTCACTCGGTTaGTCTCTGGCCCGAAATCTGCCTGTAGCTGCTGTGCATTATCCC +
Preference number: 5 (lower is better)
Translates to: GTSLCWQQRLQGSLG*SLARNLPVAAVHYP
Trigger: GGGATAATGCACAGCAGCTACAGGCAGATTTCGGGCCAGAGAGCAACCGAGTGAGCCTTGCAGCCTCTGCTGCCAGCACAGGCTTGTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS GCA 90 bp AGAAAAGCCCTACCTCCTTGCCTGCTCAGTGCCTTCAAGGCTGGATaGTCAGACGAGCTGCAGCCTCCGAAGGGAAGACCCCGAGGGAAA +
Preference number: 5 (lower is better)
Translates to: RKALPPCLLSAFKAG*SDELQPPKGRPRGK
Trigger: TTTCCCTCGGGGTCTTCCCTTCGGAGGCTGCAGCTCGTCTGAGCATCCAGCCTTGAAGGCACTGAGCAGGCAAGGAGGTAGGGCTTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS CCA 90 bp ATGATTCTGAGGGAGGGGCCAACAAGTGGCTTAGGGCGCAAGTCCTaGTCTGCACATGCTCAGCACAAGGCCGACACGAGACAGACGCTC +
Preference number: 5 (lower is better)
Translates to: MILREGPTSGLGRKS*SAHAQHKADTRQTL
Trigger: GAGCGTCTGTCTCGTGTCGGCCTTGTGCTGAGCATGTGCAGACCAGGACTTGCGCCCTAAGCCACTTGTTGGCCCCTCCCTCAGAATCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS CCA 90 bp AGCTACAGATGGCCCCAGGACATCCTGCTAGTGCGTAGTAACATGTaGTGTTGGTCAGAGGGAAGCAGTGGGGCAAGGCTCAGGGCCCAC +
Preference number: 5 (lower is better)
Translates to: SYRWPQDILLVRSNM*CWSEGSSGARLRAH
Trigger: GTGGGCCCTGAGCCTTGCCCCACTGCTTCCCTCTGACCAACACCACATGTTACTACGCACTAGCAGGATGTCCTGGGGCCATCTGTAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS-3UTR CAA 90 bp GAGGGAGGGCAGGGAAATCCCTCGGTTGCATCTGGTTGTAGAAAGAGCCACGTTGGGTCTGACGGCGAGTaGGGAGCCACCAGAGTCCAA +
Preference number: 5 (lower is better)
Translates to: EGGQGNPSVASGCRKSHVGSDGE*GATRVQ
Trigger: TTGGACTCTGGTGGCTCCCAACTCGCCGTCAGACCC...AACGTGGCTCTTTCTACAACCAGATGCAACCGAGGGATTTCCCTGCCCTCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332007.7
CDS-3UTR CAA 90 bp CCCCCGCAGGGCTGGGAGCTGGCGAAGTCAGTCCTGACATTCAGCTTGTCCACATGGTGGGTCCAGACTTaGAGGATCCCCATGAGGAAT +
Preference number: 5 (lower is better)
Translates to: PPQGWELAKSVLTFSLSTWWVQT*RIPMRN
Trigger: ATTCCTCATGGGGATCCTCAAAGTCTGGACCCACCA...TGTGGACAAGCTGAATGTCAGGACTGACTTCGCCAGCTCCCAGCCCTGCGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp AGGGAGGGCAGGGAAATCCCTCGGTTGCATCTGGTTGTAGAAAGAGCCACGTTTCAGGTCACGGCGACCTaGGTGCTGGTGGCCCACTTC +
Preference number: 5 (lower is better)
Translates to: REGREIPRLHLVVERATFQVTAT*VLVAHF
Trigger: GAAGTGGGCCACCAGCACCAAGGTCGCCGTGACCTG...AAACGTGGCTCTTTCTACAACCAGATGCAACCGAGGGATTTCCCTGCCCTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp CGACGTGAGACAGGGTGTGATGTCCCTAACGGGAACACAGAGGCTAGTGTGGGCGACTGGATGTTGTCGTaGCTGCTGTTGGGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: RRETGCDVPNGNTEASVGDWMLS*LLLGWD
Trigger: GTCCCAGCCCAACAGCAGCAACGACAACATCCAGTC...GCCCACACTAGCCTCTGTGTTCCCGTTAGGGACATCACACCCTGTCTCACGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp CTGCGTCCATGGCACTGCGACGTGAGACAGGGTGTGATGTCCCTAACGGGAACACACTGCCTGTTGAAGTaGCCCACCGTGTTGGCACTG +
Preference number: 5 (lower is better)
Translates to: LRPWHCDVRQGVMSLTGTHCLLK*PTVLAL
Trigger: CAGTGCCAACACGGTGGGCAACTTCAACAGGCAGTG...TGTTCCCGTTAGGGACATCACACCCTGTCTCACGTCGCAGTGCCATGGACGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp GAGACAGGGTGTGATGTCCCTAACGGGAACACAGAGGCTAGTGTGGGCGGGTCTGAGAGGCACTGCCTGTaGAAGTTGCCCACCGTGTTG +
Preference number: 5 (lower is better)
Translates to: ETGCDVPNGNTEASVGGSERHCL*KLPTVL
Trigger: CAACACGGTGGGCAACTTCAACAGGCAGTGCCTCTC...AGACCCGCCCACACTAGCCTCTGTGTTCCCGTTAGGGACATCACACCCTGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp AGGACACCCCCGCAGGGCTGGGAGCTGGCGAAGTCAGTCCTGACATTCAGCTTGATCTCGTATGCTCTGTaGTCAAGTCCATGGAGGCCC +
Preference number: 5 (lower is better)
Translates to: RTPPQGWELAKSVLTFSLISYAL*SSPWRP
Trigger: GGGCCTCCATGGACTTGACAACAGAGCATACGAGAT...CAAGCTGAATGTCAGGACTGACTTCGCCAGCTCCCAGCCCTGCGGGGGTGTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp AACACAGAGGCTAGTGTGGGCGGGTCTCATGCTTCCGCTTGGTGGCTGGAATCTTGCGGCCACCATCCTTaGCTCTGTTCCTTGGGGGAG +
Preference number: 5 (lower is better)
Translates to: NTEASVGGSHASAWWLESCGHHP*LCSLGE
Trigger: CTCCCCCAAGGAACAGAGCAAAGGATGGTGGCCGCA...AGATTCCAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGCCTCTGTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp TGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCGGCCCCGCCCCGCCCCTGTTTATCAGCACGTaGGTCCTTTCACAAATGGTG +
Preference number: 5 (lower is better)
Translates to: CLPHPRHTCYGTPGPAPPLFIST*VLSQMV
Trigger: CACCATTTGTGAAAGGACCAACGTGCTGATAAACAG...GGGCGGGGCGGGGCCGGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS TCA 90 bp GGTGTGGGGGCTGCTCCGTGGGTTTTGAGGTCTCGTCTCTCCAGCTaGTGCCTTGACTTTCACACCGCAGTACCAGGCAAACGCACAACT +
Preference number: 5 (lower is better)
Translates to: GVGAAPWVLRSRLSS*CLDFHTAVPGKRTT
Trigger: AGTTGTGCGTTTGCCTGGTACTGCGGTGTGAAAGTCAAGGCATCAGCTGGAGAGACGAGACCTCAAAACCCACGGAGCAGCCCCCACACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471100.5
CDS TCA 90 bp GCCAGGTCACGGCGACCTTGGTGCTGGTGGCCCACTTCACCATGGTaGTGTAGTACTCCCTGGAAACGCCAAACACAGCATGAGCAGCTT +
Preference number: 5 (lower is better)
Translates to: ARSRRPWCWWPTSPW*CSTPWKRQTQHEQL
Trigger: AAGCTGCTCATGCTGTGTTTGGCGTTTCCAGGGAGTACTACATCACCATGGTGAAGTGGGCCACCAGCACCAAGGTCGCCGTGACCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478614.1
CDS GCA 90 bp ATGATCATGGTCGCGGCGGGGGTCCCTGGTAGATGCGCTTCTCCCTaGCTTCTTGTCATTCTCAGAACCCAAGTCCACAGTCCGTTGAGC +
Preference number: 5 (lower is better)
Translates to: MIMVAAGVPGRCASP*LLVILRTQVHSPLS
Trigger: GCTCAACGGACTGTGGACTTGGGTTCTGAGAATGACAAGAAGGCAGGGAGAAGCGCATCTACCAGGGACCCCCGCCGCGACCATGATCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479637.1
CDS GCA 90 bp CCCATAACGGTGATGATCATGGTCGCGGCGGGGGTCCCTGGTAGATaGGCTTCTCCCTGCCTTCTTGTCATTCTCAGAACCCAAGTCCAC +
Preference number: 5 (lower is better)
Translates to: PITVMIMVAAGVPGR*ASPCLLVILRTQVH
Trigger: GTGGACTTGGGTTCTGAGAATGACAAGAAGGCAGGGAGAAGCGCATCTACCAGGGACCCCCGCCGCGACCATGATCATCACCGTTATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479637.1
CDS-3UTR CAA 90 bp TTTCCCAAGCAAAACTGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCCAGGTCACGGCGACCTaGGTGCTGGTGGCCCACTTC +
Preference number: 5 (lower is better)
Translates to: FPKQNCLPHPRHTCYGTPQVTAT*VLVAHF
Trigger: GAAGTGGGCCACCAGCACCAAGGTCGCCGTGACCTG...GGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp AACACAGAGGCTAGTGTGGGCGGGTCTCATGCTTCCGCTTGGTGGCTGGAATCTGACTGGATGTTGTCGTaGCTGCTGTTGGGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: NTEASVGGSHASAWWLESDWMLS*LLLGWD
Trigger: GTCCCAGCCCAACAGCAGCAACGACAACATCCAGTC...AGATTCCAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGCCTCTGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp GAGACAGGGTGTGATGTCCCTAACGGGAACACAGAGGCTAGTGTGGGCGGGTCTCCAGGACCTTCGCACTaGAGCAGGAAGAAGTCCATG +
Preference number: 5 (lower is better)
Translates to: ETGCDVPNGNTEASVGGSPGPSH*SRKKSM
Trigger: CATGGACTTCTTCCTGCTCAAGTGCGAAGGTCCTGG...AGACCCGCCCACACTAGCCTCTGTGTTCCCGTTAGGGACATCACACCCTGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp AACGGGAACACAGAGGCTAGTGTGGGCGGGTCTCATGCTTCCGCTTGGTGGCTGACTCGATGGGCTACCTaGGTCATCTCGTATGCTCTG +
Preference number: 5 (lower is better)
Translates to: NGNTEASVGGSHASAWWLTRWAT*VISYAL
Trigger: CAGAGCATACGAGATGACCAAGGTAGCCCATCGAGT...CAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGCCTCTGTGTTCCCGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp CGGGGAAGGAGCTTGTTTCCCAAGCAAAACTGCCTTCCGCATCCGAGACACACATGCGGCCACCATCCTTaGCTCTGTTCCTTGGGGGAG +
Preference number: 5 (lower is better)
Translates to: RGRSLFPKQNCLPHPRHTCGHHP*LCSLGE
Trigger: CTCCCCCAAGGAACAGAGCAAAGGATGGTGGCCGCA...TGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGGGAAACAAGCTCCTTCCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS TCA 90 bp TCTGGCCCGAAATCTGCCTGTAGCTGCTGTGCATTATCCCCGGGGTaGGCAGATGCGATGCCTCACACCTGCCACACTCGTATGACAATG +
Preference number: 5 (lower is better)
Translates to: SGPKSACSCCALSPG*ADAMPHTCHTRMTM
Trigger: CATTGTCATACGAGTGTGGCAGGTGTGAGGCATCGCATCTGCTCACCCCGGGGATAATGCACAGCAGCTACAGGCAGATTTCGGGCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406326.5
ENST00000619756.4
CDS TCA 90 bp CACCGACCACCACAGCACAGGCGTGTCTGCTGCAGTAGAAGGCCCTaGACACCCGTCAGGTCTTTCTCCATGAAAGGAATGTCTTGCTCC +
Preference number: 5 (lower is better)
Translates to: HRPPQHRRVCCSRRP*TPVRSFSMKGMSCS
Trigger: GGAGCAAGACATTCCTTTCATGGAGAAAGACCTGACGGGTGTTCAGGGCCTTCTACTGCAGCAGACACGCCTGTGCTGTGGTGGTCGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS TCA 90 bp CTCCCTGCCTTCTTGTCATTCTCAGAACCCAAGTCCACAGTCCGTTaGGCTGTTCCTGCAGCATCTCGCACGGCCTCCATCTGGTCCTTC +
Preference number: 5 (lower is better)
Translates to: LPAFLSFSEPKSTVR*AVPAASRTASIWSF
Trigger: GAAGGACCAGATGGAGGCCGTGCGAGATGCTGCAGGAACAGCTCAACGGACTGTGGACTTGGGTTCTGAGAATGACAAGAAGGCAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479637.1
CDS CCA 90 bp ATAGTGGTAGGGCTTCACGGTGGGGTAGATGGAGCCGGTGTAAGTTaGGAGCTCCATGATGGGGACACGGGAATCATTGATGGCGGCGTA +
Preference number: 5 (lower is better)
Translates to: IVVGLHGGVDGAGVS*ELHDGDTGIIDGGV
Trigger: TACGCCGCCATCAATGATTCCCGTGTCCCCATCATGGAGCTCCCAACTTACACCGGCTCCATCTACCCCACCGTGAAGCCCTACCACTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
ENST00000427557.1
CDS CCA 90 bp CTCCCTTCCAACTCAGCATTATGCGACGTGCGCCTTCTCCGCTTCTaGGCCTTGGTGTCAAGGGACGTGAGGATGAAATGCAACGGCGAA +
Preference number: 5 (lower is better)
Translates to: LPSNSALCDVRLLRF*ALVSRDVRMKCNGE
Trigger: TTCGCCGTTGCATTTCATCCTCACGTCCCTTGACACCAAGGCCCAGAAGCGGAGAAGGCGCACGTCGCATAATGCTGAGTTGGAAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS-3UTR CAA 90 bp CTTCCGCTTGGTGGCTGGAATCTAGGGGCCGGTGTCCTGTGGGCTCGCGTGGGGTCCAGTATACGAGTGTaGATATATGGGTTCCACATT +
Preference number: 5 (lower is better)
Translates to: LPLGGWNLGAGVLWARVGSSIRV*IYGFHI
Trigger: AATGTGGAACCCATATATCAACACTCGTATACTGGA...CCCCACGCGAGCCCACAGGACACCGGCCCCTAGATTCCAGCCACCAAGCGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp TCTCATGCTTCCGCTTGGTGGCTGGAATCTAGGGGCCGGTGTCCTGTGGGCTCGAATAAATATCAGCTGTaGGCCTTTAGGGCCCCATCC +
Preference number: 5 (lower is better)
Translates to: SHASAWWLESRGRCPVGSNKYQL*AFRAPS
Trigger: GGATGGGGCCCTAAAGGCCAACAGCTGATATTTATT...CGAGCCCACAGGACACCGGCCCCTAGATTCCAGCCACCAAGCGGAAGCATGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp TATGAACACGCACTGCTAAAACAATGGTGCTGTAACTGCTGCGTCCATGGCACTCAGGAGCTTGGTCCCTaGGAAGCCGCTGCCACGGCC +
Preference number: 5 (lower is better)
Translates to: YEHALLKQWCCNCCVHGTQELGP*EAAATA
Trigger: GGCCGTGGCAGCGGCTTCCAAGGGACCAAGCTCCTG...AGTGCCATGGACGCAGCAGTTACAGCACCATTGTTTTAGCAGTGCGTGTTCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp AACGGGAACACAGAGGCTAGTGTGGGCGGGTCTCATGCTTCCGCTTGGTGGCTGCTTGATTTTCTCCCTTaGCTGGGAGGATGTAGGTGC +
Preference number: 5 (lower is better)
Translates to: NGNTEASVGGSHASAWWLLDFLP*LGGCRC
Trigger: GCACCTACATCCTCCCAGCAAAGGGAGAAAATCAAG...CAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGCCTCTGTGTTCCCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp TCTCATGCTTCCGCTTGGTGGCTGGAATCTAGGGGCCGGTGTCCTGTGGGCTCGCATTCCACGAAGAAGTaGATGATGGACCGGTACAGA +
Preference number: 5 (lower is better)
Translates to: SHASAWWLESRGRCPVGSHSTKK*MMDRYR
Trigger: TCTGTACCGGTCCATCATCAACTTCTTCGTGGAATG...CGAGCCCACAGGACACCGGCCCCTAGATTCCAGCCACCAAGCGGAAGCATGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp TATGAACACGCACTGCTAAAACAATGGTGCTGTAACTGCTGCGTCCATGGCACTGCTGCGGGGACAGCGTaGTCCCTGGTGCCATGGAGG +
Preference number: 5 (lower is better)
Translates to: YEHALLKQWCCNCCVHGTAAGTA*SLVPWR
Trigger: CCTCCATGGCACCAGGGACAACGCTGTCCCCGCAGC...AGTGCCATGGACGCAGCAGTTACAGCACCATTGTTTTAGCAGTGCGTGTTCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp ATCTGCTTCTTCATCAAGCGCAAAGTCTACACGTGGACTGGAGAAAGGAAAGGGGCTGCGGGGACAGCGTaGTCCCTGGTGCCATGGAGG +
Preference number: 5 (lower is better)
Translates to: ICFFIKRKVYTWTGERKGAAGTA*SLVPWR
Trigger: CCTCCATGGCACCAGGGACAACGCTGTCCCCGCAGC...CCCTTTCCTTTCTCCAGTCCACGTGTAGACTTTGCGCTTGATGAAGAAGCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp AGAGGGATGCGCGCAGGCCCACAGAACCCTCAGGACTCCCGTGGCCCGAGCACAAGCAATCAACTCTTTTaGGCCGCTACCAATAAAGAA +
Preference number: 5 (lower is better)
Translates to: RGMRAGPQNPQDSRGPSTSNQLF*AATNKE
Trigger: TTCTTTATTGGTAGCGGCCAAAAAGAGTTGATTGCT...TGTGCTCGGGCCACGGGAGTCCTGAGGGTTCTGTGGGCCTGCGCGCATCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404039.5
CDS-3UTR CAA 90 bp GGCCTGATGACAGCGTGTCTCTCTCCACCAGTGTTGAAGGAACAAGCCTGTGCTGCAAGGCTCACTCGGTaGCTCTCTGGCCCGAAATCT +
Preference number: 5 (lower is better)
Translates to: GLMTACLSPPVLKEQACAARLTR*LSGPKS
Trigger: AGATTTCGGGCCAGAGAGCAACCGAGTGAGCCTTGC...AGCACAGGCTTGTTCCTTCAACACTGGTGGAGAGAGACACGCTGTCATCAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS TCA 90 bp AGTAGGTGCAGTTCTCAACCAGGTCACAGGAGAGGCACTGCCTGTTaGAGTTGCCCACCGTGTTGGCACTGTAGAGTTGTCGTCTCCGAG +
Preference number: 5 (lower is better)
Translates to: SRCSSQPGHRRGTAC*SCPPCWHCRVVVSE
Trigger: CTCGGAGACGACAACTCTACAGTGCCAACACGGTGGGCAACTTCAACAGGCAGTGCCTCTCCTGTGACCTGGTTGAGAACTGCACCTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
ENST00000427557.1
ENST00000493268.1
CDS TCA 90 bp CAGCGTCTCTTTATGGCATTTCTTACCGCCTCCCTTGTCTGTGGGTaGGGCCAAGCCACTGCACATGATTCTGAGGGAGGGGCCAACAAG +
Preference number: 5 (lower is better)
Translates to: QRLFMAFLTASLVCG*GQATAHDSEGGANK
Trigger: CTTGTTGGCCCCTCCCTCAGAATCATGTGCAGTGGCTTGGCCTCACCCACAGACAAGGGAGGCGGTAAGAAATGCCATAAAGAGACGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS GCA 90 bp CCAATTAGCAACAGCCTCTGCAATCGCCACAGAAACAATGATAACTaGTTAGCAACCGGCAAGTGGCGGCTGGGTGCAGGAAGGGGACCC +
Preference number: 5 (lower is better)
Translates to: PISNSLCNRHRNNDN*LATGKWRLGAGRGP
Trigger: GGGTCCCCTTCCTGCACCCAGCCGCCACTTGCCGGTTGCTAAGCAGTTATCATTGTTTCTGTGGCGATTGCAGAGGCTGTTGCTAATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332007.7
ENST00000462622.5
CDS GCA 90 bp GATGGCGGCGTAGGCGAGTCTCGTGCCATCCGGAGACCACCAGTGTaGGATGTGTGTCTTCAAAATCTCCTCTTCATACAGCCAGTCACT +
Preference number: 5 (lower is better)
Translates to: DGGVGESRAIRRPPV*DVCLQNLLFIQPVT
Trigger: AGTGACTGGCTGTATGAAGAGGAGATTTTGAAGACACACATCGCACACTGGTGGTCTCCGGATGGCACGAGACTCGCCTACGCCGCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
ENST00000427557.1
CDS GCA 90 bp GAGAGCAGAGCCGCAGGTGAATGTCTGGCCTTGATTTTCTCCCTTTaGTGGGAGGATGTAGGTGCTCAGGTAGCCACCGTAATCCTTCCC +
Preference number: 5 (lower is better)
Translates to: ESRAAGECLALIFSL*WEDVGAQVATVILP
Trigger: GGGAAGGATTACGGTGGCTACCTGAGCACCTACATCCTCCCAGCAAAGGGAGAAAATCAAGGCCAGACATTCACCTGCGGCTCTGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
ENST00000427557.1
CDS GCA 90 bp GAGAGCAGAGCCGCAGGTGAATGTCTGGCCTTGATTTTCTCCCTTTaGTGGGAGGATGTAGGTGCTCAGGTAGCCACCGTAATCCTGGAG +
Preference number: 5 (lower is better)
Translates to: ESRAAGECLALIFSL*WEDVGAQVATVILE
Trigger: CTCCAGGATTACGGTGGCTACCTGAGCACCTACATCCTCCCAGCAAAGGGAGAAAATCAAGGCCAGACATTCACCTGCGGCTCTGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS GCA 90 bp ACGTCTTTCACAAGGGAACTCAAGTGTGGTGTAACCCCGTCCTTCTaGCCCTCTTCATCCACACTGGGGTCCAACTCCCTTCTGGCTGGA +
Preference number: 5 (lower is better)
Translates to: TSFTRELKCGVTPSF*PSSSTLGSNSLLAG
Trigger: TCCAGCCAGAAGGGAGTTGGACCCCAGTGTGGATGAAGAGGGGCAGAAGGACGGGGTTACACCACACTTGAGTTCCCTTGTGAAAGACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS-3UTR CAA 90 bp TTTCCCAAGCAAAACTGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCTTGTCGTTGCTGCTGTaGGGCTGGGACGAGGACACC +
Preference number: 5 (lower is better)
Translates to: FPKQNCLPHPRHTCYGTPLSLLL*GWDEDT
Trigger: GGTGTCCTCGTCCCAGCCCAACAGCAGCAACGACAA...GGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp CCTCAGTGTTTAGGAACGTCCCCAAGACGTCTGAAGACAACCTTGAGGAGGGAGGTTGGCACTGTAGAGTaGTCGTCTCCGAGGCAGGTC +
Preference number: 5 (lower is better)
Translates to: PQCLGTSPRRLKTTLRREVGTVE*SSPRQV
Trigger: GACCTGCCTCGGAGACGACAACTCTACAGTGCCAAC...CTCCCTCCTCAAGGTTGTCTTCAGACGTCTTGGGGACGTTCCTAAACACTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp GAGGGAGGGCAGGGAAATCCCTCGGTTGCATCTGGTTGTAGAAAGAGCCACGTTCCAGGACCTTCGCACTaGAGCAGGAAGAAGTCCATG +
Preference number: 5 (lower is better)
Translates to: EGGQGNPSVASGCRKSHVPGPSH*SRKKSM
Trigger: CATGGACTTCTTCCTGCTCAAGTGCGAAGGTCCTGG...AACGTGGCTCTTTCTACAACCAGATGCAACCGAGGGATTTCCCTGCCCTCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp TCTCATGCTTCCGCTTGGTGGCTGGAATCTAGGGGCCGGTGTCCTGTGGGCTCGTTCTTATCTGTTGTGTaGTGCACCGTCACCATAGGA +
Preference number: 5 (lower is better)
Translates to: SHASAWWLESRGRCPVGSFLSVV*CTVTIG
Trigger: TCCTATGGTGACGGTGCACAACACAACAGATAAGAA...CGAGCCCACAGGACACCGGCCCCTAGATTCCAGCCACCAAGCGGAAGCATGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp AAACCCAAAGCCCCAAACGCCAAAATGCAACAGGGACGCATCTCCTCTGCTGATACTTCGTGCAGGAGCTaGGTCCCTTGGAAGCCGCTG +
Preference number: 5 (lower is better)
Translates to: KPKAPNAKMQQGRISSADTSCRS*VPWKPL
Trigger: CAGCGGCTTCCAAGGGACCAAGCTCCTGCACGAAGT...ATCAGCAGAGGAGATGCGTCCCTGTTGCATTTTGGCGTTTGGGGCTTTGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp CGACGTGAGACAGGGTGTGATGTCCCTAACGGGAACACAGAGGCTAGTGTGGGCCGTCTGAAGACAACCTaGAGGAGGGAGCAGTTACTT +
Preference number: 5 (lower is better)
Translates to: RRETGCDVPNGNTEASVGRLKTT*RREQLL
Trigger: AAGTAACTGCTCCCTCCTCAAGGTTGTCTTCAGACG...GCCCACACTAGCCTCTGTGTTCCCGTTAGGGACATCACACCCTGTCTCACGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS TCA 90 bp TGGGACTCTCCTGCAATCCTCCAGCCAGGGTCTCCATGGAATATCTaGAACAGGTCCCCCTTGTACATGGCAAGCTGGCAATGCTGTGCT +
Preference number: 5 (lower is better)
Translates to: WDSPAILQPGSPWNI*NRSPLYMASWQCCA
Trigger: AGCACAGCATTGCCAGCTTGCCATGTACAAGGGGGACCTGTTTCAGATATTCCATGGAGACCCTGGCTGGAGGATTGCAGGAGAGTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406326.5
ENST00000619756.4
CDS TCA 90 bp ACTGTTCCTGTTGCTAAGCAACACCCCACAGCTCCCCCGGAGAAATaGTGTCTCTGGGAGGTGGCACACAAAGGACACGTCTTCAGCAGA +
Preference number: 5 (lower is better)
Translates to: TVPVAKQHPTAPPEK*CLWEVAHKGHVFSR
Trigger: TCTGCTGAAGACGTGTCCTTTGTGTGCCACCTCCCAGAGACATCATTTCTCCGGGGGAGCTGTGGGGTGTTGCTTAGCAACAGGAACAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462622.5
CDS-3UTR CAA 90 bp ATGGGTGCTATTGGCTGTCTTCCCCCTCAGTGTTTAGGAACGTCCCCAAGACGTGTGATGGACTGGATGTaGTCGTTGCTGCTGTTGGGC +
Preference number: 5 (lower is better)
Translates to: MGAIGCLPPQCLGTSPRRVMDWM*SLLLLG
Trigger: GCCCAACAGCAGCAACGACAACATCCAGTCCATCAC...ACGTCTTGGGGACGTTCCTAAACACTGAGGGGGAAGACAGCCAATAGCACCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp GCGTCCATGGCACTGCGACGTGAGACAGGGTGTGATGTCCCTAACGGGAACACAAGGGAAATCCCTCGGTaGCATCTGGTTGTAGAAAGA +
Preference number: 5 (lower is better)
Translates to: ASMALRRETGCDVPNGNTREIPR*HLVVER
Trigger: TCTTTCTACAACCAGATGCAACCGAGGGATTTCCCT...TGTGTTCCCGTTAGGGACATCACACCCTGTCTCACGTCGCAGTGCCATGGACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp AACGGGAACACAGAGGCTAGTGTGGGCGGGTCTCATGCTTCCGCTTGGTGGCTGCTGTTTATCAGCACGTaGGTCCTTTCACAAATGGTG +
Preference number: 5 (lower is better)
Translates to: NGNTEASVGGSHASAWWLLFIST*VLSQMV
Trigger: CACCATTTGTGAAAGGACCAACGTGCTGATAAACAG...CAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGCCTCTGTGTTCCCGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp CGACGTGAGACAGGGTGTGATGTCCCTAACGGGAACACAGAGGCTAGTGTGGGCTGCATCTTAGCGGTCTaGATCATGGCCTTTTCCTTC +
Preference number: 5 (lower is better)
Translates to: RRETGCDVPNGNTEASVGCILAV*IMAFSF
Trigger: GAAGGAAAAGGCCATGATCAAGACCGCTAAGATGCA...GCCCACACTAGCCTCTGTGTTCCCGTTAGGGACATCACACCCTGTCTCACGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404039.5
CDS TCA 90 bp GTCCCCCTTGTACATGGCAAGCTGGCAATGCTGTGCTGTATCCATTaGCTGCCGAGACATAGTCACGCAGGCAGTGAAGAGGAAGAGACA +
Preference number: 5 (lower is better)
Translates to: VPLVHGKLAMLCCIH*LPRHSHAGSEEEET
Trigger: TGTCTCTTCCTCTTCACTGCCTGCGTGACTATGTCTCGGCAGTCAATGGATACAGCACAGCATTGCCAGCTTGCCATGTACAAGGGGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406326.5
ENST00000619756.4
CDS TCA 90 bp CTGCAAGCTGAGGTCTCACCAAACATTCCACGCTCTGAAGAGCCGTaGTTTTCACACGACCCTCCCTGGAACTTGGATTCTCCTGGAGCT +
Preference number: 5 (lower is better)
Translates to: LQAEVSPNIPRSEEP*FSHDPPWNLDSPGA
Trigger: AGCTCCAGGAGAATCCAAGTTCCAGGGAGGGTCGTGTGAAAATCACGGCTCTTCAGAGCGTGGAATGTTTGGTGAGACCTCAGCTTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481593.1
CDS GCA 90 bp ACCAGAATGACAAGCAGTGCAATTGCTATTCCTTTCCAATTCCTCTaGGGAGGGTTACTCCCCACCAGCTCGTCCTCCTCGTCACCATCG +
Preference number: 5 (lower is better)
Translates to: TRMTSSAIAIPFQFL*GGLLPTSSSSSSPS
Trigger: CGATGGTGACGAGGAGGACGAGCTGGTGGGGAGTAACCCTCCGCAGAGGAATTGGAAAGGAATAGCAATTGCACTGCTTGTCATTCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000406326.5
CDS CCA 90 bp AGCAACACCCCACAGCTCCCCCGGAGAAATGATGTCTCTGGGAGGTaGCACACAAAGGACACGTCTTCAGCAGACCCATTTCTCATTAAG +
Preference number: 5 (lower is better)
Translates to: SNTPQLPRRNDVSGR*HTKDTSSADPFLIK
Trigger: CTTAATGAGAAATGGGTCTGCTGAAGACGTGTCCTTTGTGTGCCACCTCCCAGAGACATCATTTCTCCGGGGGAGCTGTGGGGTGTTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462622.5
CDS CCA 90 bp CGGGACAGCACGGAACTGTCAGGTATGTGTGAGAGACAGAGCATGTaGCAGCGTGTGTGTGAGTATATGGGGGTGTGTGTGTGTGATATG +
Preference number: 5 (lower is better)
Translates to: RDSTELSGMCERQSM*QRVCEYMGVCVCDM
Trigger: CATATCACACACACACACCCCCATATACTCACACACACGCTGCCACATGCTCTGTCTCTCACACATACCTGACAGTTCCGTGCTGTCCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS CCA 90 bp AGTTCTGGGAAGGGTACCCCTCTTTCACTACTGCCTAGCTACAGATaGCCCCAGGACATCCTGCTAGTGCGTAGTAACATGTGGTGTTGG +
Preference number: 5 (lower is better)
Translates to: SSGKGTPLSLLPSYR*PQDILLVRSNMWCW
Trigger: CCAACACCACATGTTACTACGCACTAGCAGGATGTCCTGGGGCCATCTGTAGCTAGGCAGTAGTGAAAGAGGGGTACCCTTCCCAGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS CCA 90 bp GCTCGCCCCATATCTTGGGGAGTTGCCCACATGAACACATACACATaGACCTTTGGAGCGTCCATGGTCAGTGTGCTTAACACTGCCATG +
Preference number: 5 (lower is better)
Translates to: ARPISWGVAHMNTYT*TFGASMVSVLNTAM
Trigger: CATGGCAGTGTTAAGCACACTGACCATGGACGCTCCAAAGGTCCATGTGTATGTGTTCATGTGGGCAACTCCCCAAGATATGGGGCGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS-3UTR CAA 90 bp AGGGAGGGCAGGGAAATCCCTCGGTTGCATCTGGTTGTAGAAAGAGCCACGTTTTGGTGGGTCCAGACTTaGAGGATCCCCATGAGGAAT +
Preference number: 5 (lower is better)
Translates to: REGREIPRLHLVVERATFWWVQT*RIPMRN
Trigger: ATTCCTCATGGGGATCCTCAAAGTCTGGACCCACCA...AAACGTGGCTCTTTCTACAACCAGATGCAACCGAGGGATTTCCCTGCCCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp AACACAGAGGCTAGTGTGGGCGGGTCTCATGCTTCCGCTTGGTGGCTGGAATCTAATAAATATCAGCTGTaGGCCTTTAGGGCCCCATCC +
Preference number: 5 (lower is better)
Translates to: NTEASVGGSHASAWWLESNKYQL*AFRAPS
Trigger: GGATGGGGCCCTAAAGGCCAACAGCTGATATTTATT...AGATTCCAGCCACCAAGCGGAAGCATGAGACCCGCCCACACTAGCCTCTGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp TTTAATGGGTGCTATTGGCTGTCTTCCCCCTCAGTGTTTAGGAACGTCCCCAAGCACTGCCTGTTGAAGTaGCCCACCGTGTTGGCACTG +
Preference number: 5 (lower is better)
Translates to: FNGCYWLSSPSVFRNVPKHCLLK*PTVLAL
Trigger: CAGTGCCAACACGGTGGGCAACTTCAACAGGCAGTG...CTTGGGGACGTTCCTAAACACTGAGGGGGAAGACAGCCAATAGCACCCATTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp CGACGTGAGACAGGGTGTGATGTCCCTAACGGGAACACAGAGGCTAGTGTGGGCTTCTTATCTGTTGTGTaGTGCACCGTCACCATAGGA +
Preference number: 5 (lower is better)
Translates to: RRETGCDVPNGNTEASVGFLSVV*CTVTIG
Trigger: TCCTATGGTGACGGTGCACAACACAACAGATAAGAA...GCCCACACTAGCCTCTGTGTTCCCGTTAGGGACATCACACCCTGTCTCACGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp ATGTTGAACGTCCTCATTACAGGAAGTAGCAAGCCCATATATGAACACGCACTGCCTTTGCTCTGTTCCTaGGGGGAGGGGCCGTGGCGT +
Preference number: 5 (lower is better)
Translates to: MLNVLITGSSKPIYEHALPLLCS*GEGPWR
Trigger: ACGCCACGGCCCCTCCCCCAAGGAACAGAGCAAAGG...CAGTGCGTGTTCATATATGGGCTTGCTACTTCCTGTAATGAGGACGTTCAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp TTCCGATCTGCTTCTTCATCAAGCGCAAAGTCTACACGTGGACTGGAGAAAGGATGCGGCCACCATCCTTaGCTCTGTTCCTTGGGGGAG +
Preference number: 5 (lower is better)
Translates to: FRSASSSSAKSTRGLEKGCGHHP*LCSLGE
Trigger: CTCCCCCAAGGAACAGAGCAAAGGATGGTGGCCGCA...TCCTTTCTCCAGTCCACGTGTAGACTTTGCGCTTGATGAAGAAGCAGATCGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp GAGGGAGGGCAGGGAAATCCCTCGGTTGCATCTGGTTGTAGAAAGAGCCACGTTGTCATGGGAAAGAGCTaGATACGGTACCAAGGAGGA +
Preference number: 5 (lower is better)
Translates to: EGGQGNPSVASGCRKSHVVMGKS*IRYQGG
Trigger: TCCTCCTTGGTACCGTATCAAGCTCTTTCCCATGAC...AACGTGGCTCTTTCTACAACCAGATGCAACCGAGGGATTTCCCTGCCCTCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS TCA 90 bp CTGCCGAGACATAGTCACGCAGGCAGTGAAGAGGAAGAGACATGGTaGTGTAATGAAGAAAACAGCCCTGGTGACAAGCTGGGCTACAGG +
Preference number: 5 (lower is better)
Translates to: LPRHSHAGSEEEETW*CNEENSPGDKLGYR
Trigger: CCTGTAGCCCAGCTTGTCACCAGGGCTGTTTTCTTCATTACATCACCATGTCTCTTCCTCTTCACTGCCTGCGTGACTATGTCTCGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406326.5
ENST00000619756.4
CDS GCA 90 bp ACCAGAATGACAAGCAGTGCAATTGCTATTCCTTTCCAATTCCTCTaGGGAGGGTTACTCCCCACCAGCTCCATCACGTTCCCCTGCATC +
Preference number: 5 (lower is better)
Translates to: TRMTSSAIAIPFQFL*GGLLPTSSITFPCI
Trigger: GATGCAGGGGAACGTGATGGAGCTGGTGGGGAGTAACCCTCCGCAGAGGAATTGGAAAGGAATAGCAATTGCACTGCTTGTCATTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404039.5
CDS GCA 90 bp CCCTTGTACATGGCAAGCTGGCAATGCTGTGCTGTATCCATTGACTaGCGAGACATAGTCACGCAGGCAGTGAAGAGGAAGAGACATGGT +
Preference number: 5 (lower is better)
Translates to: PLYMASWQCCAVSID*RDIVTQAVKRKRHG
Trigger: ACCATGTCTCTTCCTCTTCACTGCCTGCGTGACTATGTCTCGGCAGTCAATGGATACAGCACAGCATTGCCAGCTTGCCATGTACAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406326.5
ENST00000619756.4
CDS CCA 90 bp TACTCCCTCATCCGTGGATCATCAGGCGGCATCATCTCCAGATCATaGGTGGGTCCATTTAAGCCAATAACGTGTAGGGAAATGCTGGGG +
Preference number: 5 (lower is better)
Translates to: YSLIRGSSGGIISRS*VGPFKPITCREMLG
Trigger: CCCCAGCATTTCCCTACACGTTATTGGCTTAAATGGACCCACCCATGATCTGGAGATGATGCCGCCTGATGATCCACGGATGAGGGAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
ENST00000427557.1
CDS CCA 90 bp TCCTCCTCCTCGTCCTCTTTCGCTGTGACTGTCAGCAGTTTGTCCTaGATCCTGAAGCATTCCACGAAGAAGTTGATGATGGACCGGTAC +
Preference number: 5 (lower is better)
Translates to: SSSSSSFAVTVSSLS*ILKHSTKKLMMDRY
Trigger: GTACCGGTCCATCATCAACTTCTTCGTGGAATGCTTCAGGATCCAGGACAAACTGCTGACAGTCACAGCGAAAGAGGACGAGGAGGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
ENST00000427557.1
CDS CCA 90 bp AGCCAGGGTCTCCATGGAATATCTGAAACAGGTCCCCCTTGTACATaGCAAGCTGGCAATGCTGTGCTGTATCCATTGACTGCCGAGACA +
Preference number: 5 (lower is better)
Translates to: SQGLHGISETGPPCT*QAGNAVLYPLTAET
Trigger: TGTCTCGGCAGTCAATGGATACAGCACAGCATTGCCAGCTTGCCATGTACAAGGGGGACCTGTTTCAGATATTCCATGGAGACCCTGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406326.5
ENST00000619756.4
CDS-3UTR CAA 90 bp GGGTGCTATTGGCTGTCTTCCCCCTCAGTGTTTAGGAACGTCCCCAAGACGTCTAATAAATATCAGCTGTaGGCCTTTAGGGCCCCATCC +
Preference number: 5 (lower is better)
Translates to: GCYWLSSPSVFRNVPKTSNKYQL*AFRAPS
Trigger: GGATGGGGCCCTAAAGGCCAACAGCTGATATTTATT...AGACGTCTTGGGGACGTTCCTAAACACTGAGGGGGAAGACAGCCAATAGCACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp AGGGAGCAGTTACTTCCGATCTGCTTCTTCATCAAGCGCAAAGTCTACACGTGGGTGATGGACTGGATGTaGTCGTTGCTGCTGTTGGGC +
Preference number: 5 (lower is better)
Translates to: REQLLPICFFIKRKVYTWVMDWM*SLLLLG
Trigger: GCCCAACAGCAGCAACGACAACATCCAGTCCATCAC...CCACGTGTAGACTTTGCGCTTGATGAAGAAGCAGATCGGAAGTAACTGCTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp ATCTGCTTCTTCATCAAGCGCAAAGTCTACACGTGGACTGGAGAAAGGAAAGGGGTTGGCACTGTAGAGTaGTCGTCTCCGAGGCAGGTC +
Preference number: 5 (lower is better)
Translates to: ICFFIKRKVYTWTGERKGVGTVE*SSPRQV
Trigger: GACCTGCCTCGGAGACGACAACTCTACAGTGCCAAC...CCCTTTCCTTTCTCCAGTCCACGTGTAGACTTTGCGCTTGATGAAGAAGCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp TTCCGATCTGCTTCTTCATCAAGCGCAAAGTCTACACGTGGACTGGAGAAAGGAGAGAGGCACTGCCTGTaGAAGTTGCCCACCGTGTTG +
Preference number: 5 (lower is better)
Translates to: FRSASSSSAKSTRGLEKGERHCL*KLPTVL
Trigger: CAACACGGTGGGCAACTTCAACAGGCAGTGCCTCTC...TCCTTTCTCCAGTCCACGTGTAGACTTTGCGCTTGATGAAGAAGCAGATCGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp CCCCTCACCATGTTGAACGTCCTCATTACAGGAAGTAGCAAGCCCATATATGAAACTTCGTGCAGGAGCTaGGTCCCTTGGAAGCCGCTG +
Preference number: 5 (lower is better)
Translates to: PLTMLNVLITGSSKPIYETSCRS*VPWKPL
Trigger: CAGCGGCTTCCAAGGGACCAAGCTCCTGCACGAAGT...TTCATATATGGGCTTGCTACTTCCTGTAATGAGGACGTTCAACATGGTGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp CCTCAGTGTTTAGGAACGTCCCCAAGACGTCTGAAGACAACCTTGAGGAGGGAGGTGACTGTCAGCAGTTaGTCCTGGATCCTGAAGCAT +
Preference number: 5 (lower is better)
Translates to: PQCLGTSPRRLKTTLRREVTVSS*SWILKH
Trigger: ATGCTTCAGGATCCAGGACAAACTGCTGACAGTCAC...CTCCCTCCTCAAGGTTGTCTTCAGACGTCTTGGGGACGTTCCTAAACACTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp TCCCCAAGACGTCTGAAGACAACCTTGAGGAGGGAGCAGTTACTTCCGATCTGCGTCATGGGAAAGAGCTaGATACGGTACCAAGGAGGA +
Preference number: 5 (lower is better)
Translates to: SPRRLKTTLRREQLLPICVMGKS*IRYQGG
Trigger: TCCTCCTTGGTACCGTATCAAGCTCTTTCCCATGAC...GCAGATCGGAAGTAACTGCTCCCTCCTCAAGGTTGTCTTCAGACGTCTTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp TTTCTTGGGCCTGATGACAGCGTGTCTCTCTCCACCAGTGTTGAAGGAACAAGCCTCTCTCCACCAGTGTaGAAGGAACAAGCCTGTGCT +
Preference number: 5 (lower is better)
Translates to: FLGPDDSVSLSTSVEGTSLSPPV*KEQACA
Trigger: AGCACAGGCTTGTTCCTTCAACACTGGTGGAGAGAG...GCTTGTTCCTTCAACACTGGTGGAGAGAGACACGCTGTCATCAGGCCCAAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS-3UTR CAA 90 bp GGCCTGATGACAGCGTGTCTCTCTCCACCAGTGTTGAAGGAACAAGCCTGTGCTTCGGCCAACATCACATaGTCACTCAGAGGAATCATG +
Preference number: 5 (lower is better)
Translates to: GLMTACLSPPVLKEQACASANIT*SLRGIM
Trigger: CATGATTCCTCTGAGTGACAATGTGATGTTGGCCGA...AGCACAGGCTTGTTCCTTCAACACTGGTGGAGAGAGACACGCTGTCATCAGGCC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS TCA 90 bp CATGTGGCCCGATCACCTAAGCTGTGGTGCCTCAGCTTCCTTAGCTaGCAAGTGGGGATAATAGCAGTTCCTGCCTCACAGGTTTTCTTA +
Preference number: 5 (lower is better)
Translates to: HVARSPKLWCLSFLS*QVGIIAVPASQVFL
Trigger: TAAGAAAACCTGTGAGGCAGGAACTGCTATTATCCCCACTTGTCAGCTAAGGAAGCTGAGGCACCACAGCTTAGGTGATCGGGCCACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493268.1
CDS GCA 90 bp AAGCTGCCGCTGCTTAGTGGGGCTTCTCCAATTAGCAACAGCCTCTaGAATCGCCACAGAAACAATGATAACTGCTTAGCAACCGGCAAG +
Preference number: 5 (lower is better)
Translates to: KLPLLSGASPISNSL*NRHRNNDNCLATGK
Trigger: CTTGCCGGTTGCTAAGCAGTTATCATTGTTTCTGTGGCGATTGCAGAGGCTGTTGCTAATTGGAGAAGCCCCACTAAGCAGCGGCAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332007.7
ENST00000462622.5
CDS-3UTR CAA 90 bp CTGCGTCCATGGCACTGCGACGTGAGACAGGGTGTGATGTCCCTAACGGGAACATCCAGTATACGAGTGTaGATATATGGGTTCCACATT +
Preference number: 5 (lower is better)
Translates to: LRPWHCDVRQGVMSLTGTSSIRV*IYGFHI
Trigger: AATGTGGAACCCATATATCAACACTCGTATACTGGA...TGTTCCCGTTAGGGACATCACACCCTGTCTCACGTCGCAGTGCCATGGACGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp AATCACCCTAACTATAACGGACGTTCAGAGCTCATGTGGATAAACCCAAAGCCCCACTGCCTGTTGAAGTaGCCCACCGTGTTGGCACTG +
Preference number: 5 (lower is better)
Translates to: NHPNYNGRSELMWINPKPHCLLK*PTVLAL
Trigger: CAGTGCCAACACGGTGGGCAACTTCAACAGGCAGTG...GGGCTTTGGGTTTATCCACATGAGCTCTGAACGTCCGTTATAGTTAGGGTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp AAACCCAAAGCCCCAAACGCCAAAATGCAACAGGGACGCATCTCCTCTGCTGATCTTGATTTTCTCCCTTaGCTGGGAGGATGTAGGTGC +
Preference number: 5 (lower is better)
Translates to: KPKAPNAKMQQGRISSADLDFLP*LGGCRC
Trigger: GCACCTACATCCTCCCAGCAAAGGGAGAAAATCAAG...ATCAGCAGAGGAGATGCGTCCCTGTTGCATTTTGGCGTTTGGGGCTTTGGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp GCACTCGGATCGGTCCTGTTTATCAGCACGTTGGTCCTTTCACAAATGGTGGTGGTCATGGGAAAGAGCTaGATACGGTACCAAGGAGGA +
Preference number: 5 (lower is better)
Translates to: ALGSVLFISTLVLSQMVVVMGKS*IRYQGG
Trigger: TCCTCCTTGGTACCGTATCAAGCTCTTTCCCATGAC...CACCACCATTTGTGAAAGGACCAACGTGCTGATAAACAGGACCGATCCGAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp GTATCTTACAAGGCTAACGTAGCACATCATCAACCTCCTGCTCGTGGCAGGAAGGCCTTTTCCTTCATTTaGCCCCAAGTCCGAACCCGA +
Preference number: 5 (lower is better)
Translates to: VSYKANVAHHQPPARGRKAFSFI*PQVRTR
Trigger: TCGGGTTCGGACTTGGGGCAAAATGAAGGAAAAGGC...CTTCCTGCCACGAGCAGGAGGTTGATGATGTGCTACGTTAGCCTTGTAAGATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404039.5
CDS-3UTR CAA 90 bp GGGCCTGATGACAGCGTGTCTCTCTCCACCAGTGTTGAAGGAACAAGCCTGTGCCAGGATAAGAATTACTaGTCACTGTATGAGCCAGGA +
Preference number: 5 (lower is better)
Translates to: GPDDSVSLSTSVEGTSLCQDKNY*SLYEPG
Trigger: TCCTGGCTCATACAGTGACAAGTAATTCTTATCCTG...GCACAGGCTTGTTCCTTCAACACTGGTGGAGAGAGACACGCTGTCATCAGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS TCA 90 bp TGGCACACAAAGGACACGTCTTCAGCAGACCCATTTCTCATTAAGTaGAGGCTGTGTGGATGCTCGGGAGGCAACACCATTACAAAAGCC +
Preference number: 5 (lower is better)
Translates to: WHTKDTSSADPFLIK*RLCGCSGGNTITKA
Trigger: GGCTTTTGTAATGGTGTTGCCTCCCGAGCATCCACACAGCCTTCACTTAATGAGAAATGGGTCTGCTGAAGACGTGTCCTTTGTGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462622.5
CDS TCA 90 bp TGTCATCTGTCCCCAAGGAGCTCTCCCATTCATTCATGTTGGACCTaGAGAGACCATTGGGTCATACCTGTTCCACCAAAGGAGCAGAAG +
Preference number: 5 (lower is better)
Translates to: CHLSPRSSPIHSCWT*RDHWVIPVPPKEQK
Trigger: CTTCTGCTCCTTTGGTGGAACAGGTATGACCCAATGGTCTCTTCAGGTCCAACATGAATGAATGGGAGAGCTCCTTGGGGACAGATGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS CCA 90 bp CAAGTGTATTCCACTGAAGCAAAGATGAAATGTAAGCAACAGCAATaGAGGCAACAGGGAGGTGCTGGCAACTTGGCCTGTGGAGGGATG +
Preference number: 5 (lower is better)
Translates to: QVYSTEAKMKCKQQQ*RQQGGAGNLACGGM
Trigger: CATCCCTCCACAGGCCAAGTTGCCAGCACCTCCCTGTTGCCTCCATTGCTGTTGCTTACATTTCATCTTTGCTTCAGTGGAATACACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462622.5
CDS-3UTR CAA 90 bp ATGTTGAACGTCCTCATTACAGGAAGTAGCAAGCCCATATATGAACACGCACTGATTTCCCCGAAGCGCTaGGCTCCTTGGCTGTGGTCA +
Preference number: 5 (lower is better)
Translates to: MLNVLITGSSKPIYEHALISPKR*APWLWS
Trigger: TGACCACAGCCAAGGAGCCAAGCGCTTCGGGGAAAT...CAGTGCGTGTTCATATATGGGCTTGCTACTTCCTGTAATGAGGACGTTCAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332007.7
CDS-3UTR CAA 90 bp GTATCTTACAAGGCTAACGTAGCACATCATCAACCTCCTGCTCGTGGCAGGAAGGTGACTGTCAGCAGTTaGTCCTGGATCCTGAAGCAT +
Preference number: 5 (lower is better)
Translates to: VSYKANVAHHQPPARGRKVTVSS*SWILKH
Trigger: ATGCTTCAGGATCCAGGACAAACTGCTGACAGTCAC...CTTCCTGCCACGAGCAGGAGGTTGATGATGTGCTACGTTAGCCTTGTAAGATAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp GTTCAGTATTCACGAGGGTCCATTGCTGCATCTCTGAGAACAGGCCATTTGAACGGAAGGCAGTATTTCTaGGGCCTGATGACAGCGTGT +
Preference number: 5 (lower is better)
Translates to: VQYSRGSIAASLRTGHLNGRQYF*GLMTAC
Trigger: ACACGCTGTCATCAGGCCCAAGAAATACTGCCTTCC...GTTCAAATGGCCTGTTCTCAGAGATGCAGCAATGGACCCTCGTGAATACTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS-3UTR CAA 90 bp TCTGAAGAAGACACAGTCGGCCAACATCACATTGTCACTCAGAGGAATCATGAGCTGAGAACAGGCCATTaGAACCAGTGGAGGGTCCCT +
Preference number: 5 (lower is better)
Translates to: SEEDTVGQHHIVTQRNHELRTGH*NQWRVP
Trigger: AGGGACCCTCCACTGGTTCAAATGGCCTGTTCTCAG...CTCATGATTCCTCTGAGTGACAATGTGATGTTGGCCGACTGTGTCTTCTTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS TCA 90 bp TCTGCTGCAGTAGAAGGCCCTGAACACCCGTCAGGTCTTTCTCCATaGAAGGAATGTCTTGCTCCAGGTTCAAAACAGAGTAACATGCGT +
Preference number: 5 (lower is better)
Translates to: SAAVEGPEHPSGLSP*KECLAPGSKQSNMR
Trigger: ACGCATGTTACTCTGTTTTGAACCTGGAGCAAGACATTCCTTTCATGGAGAAAGACCTGACGGGTGTTCAGGGCCTTCTACTGCAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS CCA 90 bp GTACCTCTCGGAAAACGCAGAGGCATAGAGTTTGAAGTCTGTTATTaGAGAGAGAGCAGAGCCGCAGGTGAATGTCTGGCCTTGATTTTC +
Preference number: 5 (lower is better)
Translates to: VPLGKRRGIEFEVCY*RESRAAGECLALIF
Trigger: GAAAATCAAGGCCAGACATTCACCTGCGGCTCTGCTCTCTCTCCAATAACAGACTTCAAACTCTATGCCTCTGCGTTTTCCGAGAGGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
ENST00000427557.1
ENST00000480367.1
CDS-3UTR CAA 90 bp CTCATTACAGGAAGTAGCAAGCCCATATATGAACACGCACTGCTAAAACAATGGGAGAGGCACTGCCTGTaGAAGTTGCCCACCGTGTTG +
Preference number: 5 (lower is better)
Translates to: LITGSSKPIYEHALLKQWERHCL*KLPTVL
Trigger: CAACACGGTGGGCAACTTCAACAGGCAGTGCCTCTC...CCATTGTTTTAGCAGTGCGTGTTCATATATGGGCTTGCTACTTCCTGTAATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp GGTCCTGTTTATCAGCACGTTGGTCCTTTCACAAATGGTGGTGAATCACCTTTACCAGGACCTTCGCACTaGAGCAGGAAGAAGTCCATG +
Preference number: 5 (lower is better)
Translates to: GPVYQHVGPFTNGGESPLPGPSH*SRKKSM
Trigger: CATGGACTTCTTCCTGCTCAAGTGCGAAGGTCCTGG...TAAAGGTGATTCACCACCATTTGTGAAAGGACCAACGTGCTGATAAACAGGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp GCGAAGTCAGTCCTGACATTCAGCTTGTCCACAAGCTCAAAAGGAAATGACAGTACTCGATGGGCTACCTaGGTCATCTCGTATGCTCTG +
Preference number: 5 (lower is better)
Translates to: AKSVLTFSLSTSSKGNDSTRWAT*VISYAL
Trigger: CAGAGCATACGAGATGACCAAGGTAGCCCATCGAGT...ACTGTCATTTCCTTTTGAGCTTGTGGACAAGCTGAATGTCAGGACTGACTTCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp AGTGCACACCTACAGCCAAGCCCTAGCATAGCTGAGTGGGAGAGAGGTTTTATTCATTCCACGAAGAAGTaGATGATGGACCGGTACAGA +
Preference number: 5 (lower is better)
Translates to: SAHLQPSPSIAEWERGFIHSTKK*MMDRYR
Trigger: TCTGTACCGGTCCATCATCAACTTCTTCGTGGAATG...AATAAAACCTCTCTCCCACTCAGCTATGCTAGGGCTTGGCTGTAGGTGTGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS CCA 90 bp GGCCATTGTAAATCACACCTTCCTTGCCAGTGGAGACCACACGGATaGCCTGTTTCCCGACATGTGCACAGTAGTAGATATTGTTTTCAA +
Preference number: 5 (lower is better)
Translates to: GHCKSHLPCQWRPHG*PVSRHVHSSRYCFQ
Trigger: TTGAAAACAATATCTACTACTGTGCACATGTCGGGAAACAGGCCATCCGTGTGGTCTCCACTGGCAAGGAAGGTGTGATTTACAATGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
ENST00000427557.1
CDS-3UTR CAA 90 bp ATGTTGAACGTCCTCATTACAGGAAGTAGCAAGCCCATATATGAACACGCACTGACTCGATGGGCTACCTaGGTCATCTCGTATGCTCTG +
Preference number: 5 (lower is better)
Translates to: MLNVLITGSSKPIYEHALTRWAT*VISYAL
Trigger: CAGAGCATACGAGATGACCAAGGTAGCCCATCGAGT...CAGTGCGTGTTCATATATGGGCTTGCTACTTCCTGTAATGAGGACGTTCAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp CCCCTCACCATGTTGAACGTCCTCATTACAGGAAGTAGCAAGCCCATATATGAAGTGACTGTCAGCAGTTaGTCCTGGATCCTGAAGCAT +
Preference number: 5 (lower is better)
Translates to: PLTMLNVLITGSSKPIYEVTVSS*SWILKH
Trigger: ATGCTTCAGGATCCAGGACAAACTGCTGACAGTCAC...TTCATATATGGGCTTGCTACTTCCTGTAATGAGGACGTTCAACATGGTGAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp ATGACAGCGTGTCTCTCTCCACCAGTGTTGAAGGAACAAGCCTGTGCTGGCAGCATGAGTCACATGATTTaGAATGAGGCAATGTCAACT +
Preference number: 5 (lower is better)
Translates to: MTACLSPPVLKEQACAGSMSHMI*NEAMST
Trigger: AGTTGACATTGCCTCATTCAAAATCATGTGACTCAT...GCTGCCAGCACAGGCTTGTTCCTTCAACACTGGTGGAGAGAGACACGCTGTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS TCA 90 bp ACGAAGGACCTGGACTCACCACTTATCCACTTAGCCTCGGGGTCATaGATTTTGAAGTCTTCACTGAAGAGATCTTCTACAGTGACCTTC +
Preference number: 5 (lower is better)
Translates to: TKDLDSPLIHLASGS*ILKSSLKRSSTVTF
Trigger: GAAGGTCACTGTAGAAGATCTCTTCAGTGAAGACTTCAAAATTCATGACCCCGAGGCTAAGTGGATAAGTGGTGAGTCCAGGTCCTTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462622.5
CDS TCA 90 bp CAGAGCGGAGCTATCATTAATTATAAGAAAACGTTGAGCATGTGCTaGTTTTCCAACCTGCTGGGACCTTGCTCATCACCGACCACCACA +
Preference number: 5 (lower is better)
Translates to: QSGAIINYKKTLSMC*FSNLLGPCSSPTTT
Trigger: TGTGGTGGTCGGTGATGAGCAAGGTCCCAGCAGGTTGGAAAATCAGCACATGCTCAACGTTTTCTTATAATTAATGATAGCTCCGCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS TCA 90 bp CACTGCCATGCAACTGCCACACTTACTTTGAAAAAGTCTGAAATCTaGACGTCTTTCACAAGGGAACTCAAGTGTGGTGTAACCCCGTCC +
Preference number: 5 (lower is better)
Translates to: HCHATATLTLKKSEI*TSFTRELKCGVTPS
Trigger: GGACGGGGTTACACCACACTTGAGTTCCCTTGTGAAAGACGTTCAGATTTCAGACTTTTTCAAAGTAAGTGTGGCAGTTGCATGGCAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS-3UTR CAA 90 bp AGGAGGGAGCAGTTACTTCCGATCTGCTTCTTCATCAAGCGCAAAGTCTACACGGTAGACAAGACGAGTTaGCTCTTTAAATGCAAGCAG +
Preference number: 5 (lower is better)
Translates to: RREQLLPICFFIKRKVYTVDKTS*LFKCKQ
Trigger: CTGCTTGCATTTAAAGAGCAAACTCGTCTTGTCTAC...CGTGTAGACTTTGCGCTTGATGAAGAAGCAGATCGGAAGTAACTGCTCCCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332007.7
CDS-3UTR CAA 90 bp TTTCCCAAGCAAAACTGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCTCCAGTATACGAGTGTaGATATATGGGTTCCACATT +
Preference number: 5 (lower is better)
Translates to: FPKQNCLPHPRHTCYGTPSSIRV*IYGFHI
Trigger: AATGTGGAACCCATATATCAACACTCGTATACTGGA...GGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp GGATCGGTCCTGTTTATCAGCACGTTGGTCCTTTCACAAATGGTGGTGAATCACTTCTTATCTGTTGTGTaGTGCACCGTCACCATAGGA +
Preference number: 5 (lower is better)
Translates to: GSVLFISTLVLSQMVVNHFLSVV*CTVTIG
Trigger: TCCTATGGTGACGGTGCACAACACAACAGATAAGAA...GTGATTCACCACCATTTGTGAAAGGACCAACGTGCTGATAAACAGGACCGATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp CTCATTACAGGAAGTAGCAAGCCCATATATGAACACGCACTGCTAAAACAATGGATCTCGTATGCTCTGTaGTCAAGTCCATGGAGGCCC +
Preference number: 5 (lower is better)
Translates to: LITGSSKPIYEHALLKQWISYAL*SSPWRP
Trigger: GGGCCTCCATGGACTTGACAACAGAGCATACGAGAT...CCATTGTTTTAGCAGTGCGTGTTCATATATGGGCTTGCTACTTCCTGTAATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp GCGAAGTCAGTCCTGACATTCAGCTTGTCCACAAGCTCAAAAGGAAATGACAGTGTCCTGACATTCAGCTaGTCCACAAGCTCAAAAGGA +
Preference number: 5 (lower is better)
Translates to: AKSVLTFSLSTSSKGNDSVLTFS*STSSKG
Trigger: TCCTTTTGAGCTTGTGGACAAGCTGAATGTCAGGAC...ACTGTCATTTCCTTTTGAGCTTGTGGACAAGCTGAATGTCAGGACTGACTTCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS TCA 90 bp GGGCTGAAGTACAGAGCGGAGCTATCATTAATTATAAGAAAACGTTaGGCATGTGCTGATTTTCCAACCTGCTGGGACCTTGCTCATCAC +
Preference number: 5 (lower is better)
Translates to: GLKYRAELSLIIRKR*ACADFPTCWDLAHH
Trigger: GTGATGAGCAAGGTCCCAGCAGGTTGGAAAATCAGCACATGCTCAACGTTTTCTTATAATTAATGATAGCTCCGCTCTGTACTTCAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS-3UTR CAA 90 bp TTTCCCAAGCAAAACTGCCTTCCGCATCCGAGACACACATGCTATGGAACACCCAGTGACCTTCTTCTTTaGAGACAGACTATTATCTTC +
Preference number: 5 (lower is better)
Translates to: FPKQNCLPHPRHTCYGTPSDLLL*RQTIIF
Trigger: GAAGATAATAGTCTGTCTCAAAAGAAGAAGGTCACT...GGGTGTTCCATAGCATGTGTGTCTCGGATGCGGAAGGCAGTTTTGCTTGGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp ATGTTGAACGTCCTCATTACAGGAAGTAGCAAGCCCATATATGAACACGCACTGAGGGAAATCCCTCGGTaGCATCTGGTTGTAGAAAGA +
Preference number: 5 (lower is better)
Translates to: MLNVLITGSSKPIYEHALREIPR*HLVVER
Trigger: TCTTTCTACAACCAGATGCAACCGAGGGATTTCCCT...CAGTGCGTGTTCATATATGGGCTTGCTACTTCCTGTAATGAGGACGTTCAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp TCAGTCCTGACATTCAGCTTGTCCACAAGCTCAAAAGGAAATGACAGTAATGGACGTCTGAAGACAACCTaGAGGAGGGAGCAGTTACTT +
Preference number: 5 (lower is better)
Translates to: SVLTFSLSTSSKGNDSNGRLKTT*RREQLL
Trigger: AAGTAACTGCTCCCTCCTCAAGGTTGTCTTCAGACG...TCCATTACTGTCATTTCCTTTTGAGCTTGTGGACAAGCTGAATGTCAGGACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp CTCATTACAGGAAGTAGCAAGCCCATATATGAACACGCACTGCTAAAACAATGGAGGGAAATCCCTCGGTaGCATCTGGTTGTAGAAAGA +
Preference number: 5 (lower is better)
Translates to: LITGSSKPIYEHALLKQWREIPR*HLVVER
Trigger: TCTTTCTACAACCAGATGCAACCGAGGGATTTCCCT...CCATTGTTTTAGCAGTGCGTGTTCATATATGGGCTTGCTACTTCCTGTAATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS-3UTR CAA 90 bp CTCATTACAGGAAGTAGCAAGCCCATATATGAACACGCACTGCTAAAACAATGGGTCCTGACATTCAGCTaGTCCACAAGCTCAAAAGGA +
Preference number: 5 (lower is better)
Translates to: LITGSSKPIYEHALLKQWVLTFS*STSSKG
Trigger: TCCTTTTGAGCTTGTGGACAAGCTGAATGTCAGGAC...CCATTGTTTTAGCAGTGCGTGTTCATATATGGGCTTGCTACTTCCTGTAATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000404039.5
CDS TCA 90 bp TTGAAGTCTTCACTGAAGAGATCTTCTACAGTGACCTTCTTCTTTTaGGACAGACTATTATCTTCCGCTGGTGTCAGAAGTATGACCGAG +
Preference number: 5 (lower is better)
Translates to: LKSSLKRSSTVTFFF*DRLLSSAGVRSMTE
Trigger: CTCGGTCATACTTCTGACACCAGCGGAAGATAATAGTCTGTCTCAAAAGAAGAAGGTCACTGTAGAAGATCTCTTCAGTGAAGACTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
ENST00000406326.5
ENST00000427557.1
ENST00000462622.5
ENST00000496611.1
ENST00000619756.4
CDS TCA 90 bp TGCTTAACACTGCCATGCAACTGCCACACTTACTTTGAAAAAGTCTaGAATCTGAACGTCTTTCACAAGGGAACTCAAGTGTGGTGTAAC +
Preference number: 5 (lower is better)
Translates to: CLTLPCNCHTYFEKV*NLNVFHKGTQVWCN
Trigger: GTTACACCACACTTGAGTTCCCTTGTGAAAGACGTTCAGATTTCAGACTTTTTCAAAGTAAGTGTGGCAGTTGCATGGCAGTGTTAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS CCA 90 bp AGTTTCATTTGGAAGCTATTCTACAAGAACTCCATGAGTTGCTTTTaGTCCTTCTGCCTAACGGAAAGAGAGCAAGAGAACAAAGGGGAA +
Preference number: 5 (lower is better)
Translates to: SFIWKLFYKNSMSCF*SFCLTEREQENKGE
Trigger: TTCCCCTTTGTTCTCTTGCTCTCTTTCCGTTAGGCAGAAGGACCAAAAGCAACTCATGGAGTTCTTGTAGAATAGCTTCCAAATGAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462622.5
CDS GCA 90 bp ACTCCAAGTTTCATTTGGAAGCTATTCTACAAGAACTCCATGAGTTaGTTTTGGTCCTTCTGCCTAACGGAAAGAGAGCAAGAGAACAAA +
Preference number: 5 (lower is better)
Translates to: TPSFIWKLFYKNSMS*FWSFCLTEREQENK
Trigger: TTTGTTCTCTTGCTCTCTTTCCGTTAGGCAGAAGGACCAAAAGCAACTCATGGAGTTCTTGTAGAATAGCTTCCAAATGAAACTTGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462622.5
CDS TCA 90 bp CAACTTGGCCTGTGGAGGGATGGGTACATCTTCCATGGATGCACTTaGATTATTTCAGACCCAATTAGAAGAAATAGATTATGTTATGAA +
Preference number: 5 (lower is better)
Translates to: QLGLWRDGYIFHGCT*IISDPIRRNRLCYE
Trigger: TTCATAACATAATCTATTTCTTCTAATTGGGTCTGAAATAATTCAAGTGCATCCATGGAAGATGTACCCATCCCTCCACAGGCCAAGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462622.5
CDS TCA 90 bp TGTCAACTTCCTGGACTTCACTTTCTTCATGGGTTCCACATTGTATaGAAAAAGTGCATACTCTCTATCTGGAGATATTTCATATCTGAT +
Preference number: 5 (lower is better)
Translates to: CQLPGLHFLHGFHIV*KKCILSIWRYFISD
Trigger: ATCAGATATGAAATATCTCCAGATAGAGAGTATGCACTTTTTTCATACAATGTGGAACCCATGAAGAAAGTGAAGTCCAGGAAGTTGACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406326.5
ENST00000619756.4
CDS TCA 90 bp CCAATTAGAAGAAATAGATTATGTTATGAACCAACACAGGCATTGTaGACATATGCCTTCTGCCCCCAACTGTATTTTGTTCTGTTGTTT +
Preference number: 5 (lower is better)
Translates to: PIRRNRLCYEPTQAL*TYAFCPQLYFVLLF
Trigger: AAACAACAGAACAAAATACAGTTGGGGGCAGAAGGCATATGTTCACAATGCCTGTGTTGGTTCATAACATAATCTATTTCTTCTAATTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462622.5
CDS GCA 72 bp GGCTGGGTGCAGGAAGGGGACCCGAGTGATGCGCGCTaGCTCCTCGCCCGCCTCCCGGCCCGGCGCCCACGG +
Preference number: 6 (lower is better)
Translates to: GWVQEGDPSDAR*LLARLPARRPR
Trigger: CCGTGGGCGCCGGGCCGGGAGGCGGGCGAGGAGGCAGCGCGCATCACTCGGGTCCCCTTCCTGCACCCAGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332007.7
ENST00000462622.5
CDS CCA 72 bp TCCAGCAGGCGGTGCGGGGTGCAGCGGTCGCCGCTCTaGTCCCTAAGGGCAGGGACCCGGCCGGGCGGCGAC +
Preference number: 6 (lower is better)
Translates to: SSRRCGVQRSPL*SLRAGTRPGGD
Trigger: GTCGCCGCCCGGCCGGGTCCCTGCCCTTAGGGACCAGAGCGGCGACCGCTGCACCCCGCACCGCCTGCTGGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404039.5
CDS GCA 72 bp CTGCGCGCGTGTCCACCGAGCTCGGCGCCAGCACACTaGGAGCAACAGCGCGGCGGCACGCACAGGGGGCGC +
Preference number: 6 (lower is better)
Translates to: LRACPPSSAPAH*EQQRGGTHRGR
Trigger: GCGCCCCCTGTGCGTGCCGCCGCGCTGTTGCTCGCAGTGTGCTGGCGCCGAGCTCGGTGGACACGCGCGCAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404039.5
CDS TCA 72 bp GCTGCGAGCCCAGCTAGCGAGGGCGAGAGGCAGCTCTaGCTGCGCGCGTGTCCACCGAGCTCGGCGCCAGCA +
Preference number: 6 (lower is better)
Translates to: AASPASEGERQL*LRACPPSSAPA
Trigger: TGCTGGCGCCGAGCTCGGTGGACACGCGCGCAGTCAGAGCTGCCTCTCGCCCTCGCTAGCTGGGCTCGCAGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404039.5
CDS GCA 72 bp CGAGCCCAGCTAGCGAGGGCGAGAGGCAGCTCTGACTaGGCGCGTGTCCACCGAGCTCGGCGCCAGCACACT +
Preference number: 6 (lower is better)
Translates to: RAQLARARGSSD*ARVHRARRQHT
Trigger: AGTGTGCTGGCGCCGAGCTCGGTGGACACGCGCGCAGTCAGAGCTGCCTCTCGCCCTCGCTAGCTGGGCTCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404039.5
CDS TCA 72 bp GTCCAGGCGCTTCCCACCACCGGGGCAGGTGGGGTCTaGCGGCGAGTTGGGAGCCACCAGAGTCCAAGCGGT +
Preference number: 6 (lower is better)
Translates to: VQALPTTGAGGV*RRVGSHQSPSG
Trigger: ACCGCTTGGACTCTGGTGGCTCCCAACTCGCCGTCAGACCCCACCTGCCCCGGTGGTGGGAAGCGCCTGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332007.7
ENST00000462622.5
ENST00000496611.1
ENST00000619756.4
CDS CAA 90 bp CAGCAAGCCCAGCCGCCGCCTCACTTCGTGCAGGAGCTTGGTCCCTaGGAAGCCGCTGCCACGGCCGTCACACTTTACCACCACCGCGCC +
Preference number: 6 (lower is better)
Translates to: QQAQPPPHFVQELGP*EAAATAVTLYHHRA
Trigger: GGCGCGGTGGTGGTAAAGTGTGACGGCCGTGGCAGCGGCTTCCAAGGGACCAAGCTCCTGCACGAAGTGAGGCGGCGGCTGGGCTTGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
ENST00000427557.1
ENST00000479637.1
ENST00000484789.5
ENST00000488512.5
CDS CCA 72 bp ATGGTCTGTCCAGGCGCTTCCCACCACCGGGGCAGGTaGGGTCTGACGGCGAGTTGGGAGCCACCAGAGTCC +
Preference number: 6 (lower is better)
Translates to: MVCPGASHHRGR*GLTASWEPPES
Trigger: GGACTCTGGTGGCTCCCAACTCGCCGTCAGACCCCACCTGCCCCGGTGGTGGGAAGCGCCTGGACAGACCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332007.7
ENST00000462622.5
ENST00000496611.1
ENST00000619756.4
CDS CCA 72 bp CTCTGGGCAACCCTGGAGAACGGGAGGCACCGTGAGTaGAGCCGGCACGCCGTCTGTTTCTGCCTGGGGAGC +
Preference number: 6 (lower is better)
Translates to: LWATLENGRHRE*SRHAVCFCLGS
Trigger: GCTCCCCAGGCAGAAACAGACGGCGTGCCGGCTCCACTCACGGTGCCTCCCGTTCTCCAGGGTTGCCCAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481593.1
CDS CAA 72 bp AGCAAGCCCAGCCGCCGCCTCACTTCGTGCAGGAGCTaGGTCCCTTGGAAGCCGCTGCCACGGCCGTCACAC +
Preference number: 6 (lower is better)
Translates to: SKPSRRLTSCRS*VPWKPLPRPSH
Trigger: GTGTGACGGCCGTGGCAGCGGCTTCCAAGGGACCAAGCTCCTGCACGAAGTGAGGCGGCGGCTGGGCTTGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
ENST00000427557.1
ENST00000479637.1
ENST00000484789.5
ENST00000488512.5
CDS TCA 72 bp TCTTCGTGCAGACCCCCGTGGTGGCGTCGCAGAGGGTaGGGATGGACACGTTCTGCGCCCGGTTCAGCCAGG +
Preference number: 6 (lower is better)
Translates to: SSCRPPWWRRRG*GWTRSAPGSAR
Trigger: CCTGGCTGAACCGGGCGCAGAACGTGTCCATCCTCACCCTCTGCGACGCCACCACGGGGGTCTGCACGAAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
ENST00000427557.1
ENST00000471100.5
ENST00000478614.1
ENST00000481593.1
CDS TCA 72 bp AGCTCTCTGGGCAACCCTGGAGAACGGGAGGCACCGTaGGTGGAGCCGGCACGCCGTCTGTTTCTGCCTGGG +
Preference number: 6 (lower is better)
Translates to: SSLGNPGEREAP*VEPARRLFLPG
Trigger: CCCAGGCAGAAACAGACGGCGTGCCGGCTCCACTCACGGTGCCTCCCGTTCTCCAGGGTTGCCCAGAGAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481593.1
CDS GCA 72 bp TTCTCCTCCAGCAAGCCCAGCCGCCGCCTCACTTCGTaGAGGAGCTTGGTCCCTTGGAAGCCGCTGCCACGG +
Preference number: 6 (lower is better)
Translates to: FSSSKPSRRLTS*RSLVPWKPLPR
Trigger: CCGTGGCAGCGGCTTCCAAGGGACCAAGCTCCTGCACGAAGTGAGGCGGCGGCTGGGCTTGCTGGAGGAGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
ENST00000427557.1
ENST00000479637.1
ENST00000484789.5
ENST00000488512.5
CDS CCA 72 bp CTGCCACGGCCGTCACACTTTACCACCACCGCGCCGTaGCTGCTCACCATCACCGTCTCCCAGCTCACCTCG +
Preference number: 6 (lower is better)
Translates to: LPRPSHFTTTAP*LLTITVSQLTS
Trigger: CGAGGTGAGCTGGGAGACGGTGATGGTGAGCAGCCACGGCGCGGTGGTGGTAAAGTGTGACGGCCGTGGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
ENST00000427557.1
ENST00000479637.1
ENST00000484789.5
ENST00000488512.5
CDS TCA 72 bp GGGTCCAACTCCCTTCTGGCTGGAGCTCTCCCTGCCTaGTCAAGCCCACAGGTGGTCCCTCCCTCCCACAGG +
Preference number: 6 (lower is better)
Translates to: GSNSLLAGALPA*SSPQVVPPSHR
Trigger: CCTGTGGGAGGGAGGGACCACCTGTGGGCTTGATCAGGCAGGGAGAGCTCCAGCCAGAAGGGAGTTGGACCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS CCA 72 bp GCACGGATTTCCCCGAAGCGCTTGGCTCCTTGGCTGTaGTCATGGTCTGTCCAGGCGCTTCCCACCACCGGG +
Preference number: 6 (lower is better)
Translates to: ARISPKRLAPWL*SWSVQALPTTG
Trigger: CCCGGTGGTGGGAAGCGCCTGGACAGACCATGACCACAGCCAAGGAGCCAAGCGCTTCGGGGAAATCCGTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332007.7
ENST00000427557.1
ENST00000462622.5
ENST00000496611.1
ENST00000619756.4
CDS CCA 72 bp AGCCGCCGCCTCACTTCGTGCAGGAGCTTGGTCCCTTaGAAGCCGCTGCCACGGCCGTCACACTTTACCACC +
Preference number: 6 (lower is better)
Translates to: SRRLTSCRSLVP*KPLPRPSHFTT
Trigger: GGTGGTAAAGTGTGACGGCCGTGGCAGCGGCTTCCAAGGGACCAAGCTCCTGCACGAAGTGAGGCGGCGGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
ENST00000427557.1
ENST00000479637.1
ENST00000484789.5
ENST00000488512.5
CDS CAA 72 bp CAGCCGCCGCCTCACTTCGTGCAGGAGCTTGGTCCCTaGGAAGCCGCTGCCACGGCCGTCACACTTTACCAC +
Preference number: 6 (lower is better)
Translates to: QPPPHFVQELGP*EAAATAVTLYH
Trigger: GTGGTAAAGTGTGACGGCCGTGGCAGCGGCTTCCAAGGGACCAAGCTCCTGCACGAAGTGAGGCGGCGGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
ENST00000427557.1
ENST00000479637.1
ENST00000484789.5
ENST00000488512.5
CDS CAA 90 bp TCCTGTTCCTGCTGCTGCACGGATTTCCCCGAAGCGCTTGGCTCCTaGGCTGTGGTCATGGTCTGTCCAGGCGCTTCCCACCACCGGGGC +
Preference number: 6 (lower is better)
Translates to: SCSCCCTDFPEALGS*AVVMVCPGASHHRG
Trigger: GCCCCGGTGGTGGGAAGCGCCTGGACAGACCATGACCACAGCCAAGGAGCCAAGCGCTTCGGGGAAATCCGTGCAGCAGCAGGAACAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000332007.7
ENST00000427557.1
ENST00000462622.5
ENST00000496611.1
ENST00000619756.4
CDS CAA 90 bp TTCTCCTCCAGCAAGCCCAGCCGCCGCCTCACTTCGTGCAGGAGCTaGGTCCCTTGGAAGCCGCTGCCACGGCCGTCACACTTTACCACC +
Preference number: 6 (lower is better)
Translates to: FSSSKPSRRLTSCRS*VPWKPLPRPSHFTT
Trigger: GGTGGTAAAGTGTGACGGCCGTGGCAGCGGCTTCCAAGGGACCAAGCTCCTGCACGAAGTGAGGCGGCGGCTGGGCTTGCTGGAGGAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
ENST00000427557.1
ENST00000479637.1
ENST00000484789.5
ENST00000488512.5
CDS TCA 72 bp GGGGCTGGGCCTGGCTCCAGATGCATGGGGTGTCTGTaGAGGCCTTTGCTGTGCCCACATGTGTGTCCCTGG +
Preference number: 6 (lower is better)
Translates to: GAGPGSRCMGCL*RPLLCPHVCPW
Trigger: CCAGGGACACACATGTGGGCACAGCAAAGGCCTTCACAGACACCCCATGCATCTGGAGCCAGGCCCAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS GCA 72 bp CACGGCCGTCACACTTTACCACCACCGCGCCGTGGCTaGTCACCATCACCGTCTCCCAGCTCACCTCGAACT +
Preference number: 6 (lower is better)
Translates to: HGRHTLPPPRRG*SPSPSPSSPRT
Trigger: AGTTCGAGGTGAGCTGGGAGACGGTGATGGTGAGCAGCCACGGCGCGGTGGTGGTAAAGTGTGACGGCCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
ENST00000427557.1
ENST00000479637.1
ENST00000484789.5
ENST00000488512.5
CDS GCA 72 bp TCACTTCGTGCAGGAGCTTGGTCCCTTGGAAGCCGCTaGCACGGCCGTCACACTTTACCACCACCGCGCCGT +
Preference number: 6 (lower is better)
Translates to: SLRAGAWSLGSR*HGRHTLPPPRR
Trigger: ACGGCGCGGTGGTGGTAAAGTGTGACGGCCGTGGCAGCGGCTTCCAAGGGACCAAGCTCCTGCACGAAGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
ENST00000427557.1
ENST00000479637.1
ENST00000484789.5
ENST00000488512.5
CDS GCA 72 bp ACTGGGGTCCAACTCCCTTCTGGCTGGAGCTCTCCCTaGCTGATCAAGCCCACAGGTGGTCCCTCCCTCCCA +
Preference number: 6 (lower is better)
Translates to: TGVQLPSGWSSP*LIKPTGGPSLP
Trigger: TGGGAGGGAGGGACCACCTGTGGGCTTGATCAGGCAGGGAGAGCTCCAGCCAGAAGGGAGTTGGACCCCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS CCA 72 bp ATTTCCCCGAAGCGCTTGGCTCCTTGGCTGTGGTCATaGTCTGTCCAGGCGCTTCCCACCACCGGGGCAGGT +
Preference number: 6 (lower is better)
Translates to: ISPKRLAPWLWS*SVQALPTTGAG
Trigger: ACCTGCCCCGGTGGTGGGAAGCGCCTGGACAGACCATGACCACAGCCAAGGAGCCAAGCGCTTCGGGGAAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000332007.7
ENST00000427557.1
ENST00000462622.5
ENST00000496611.1
ENST00000619756.4
CDS CCA 72 bp GGAACTTGGATTCTCCTGGAGCTCTCTGGGCAACCCTaGAGAACGGGAGGCACCGTGAGTGGAGCCGGCACG +
Preference number: 6 (lower is better)
Translates to: GTWILLELSGQP*RTGGTVSGAGT
Trigger: CGTGCCGGCTCCACTCACGGTGCCTCCCGTTCTCCAGGGTTGCCCAGAGAGCTCCAGGAGAATCCAAGTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481593.1
CDS CAA 72 bp TGGGAGTGCAGGCCGGGCATCGCTCTGGATTTGCAGTaGTCCTTCAGACCGCATGAGGGCAGGCGGCTGAGC +
Preference number: 6 (lower is better)
Translates to: WECRPGIALDLQ*SFRPHEGRRLS
Trigger: GCTCAGCCGCCTGCCCTCATGCGGTCTGAAGGACAACTGCAAATCCAGAGCGATGCCCGGCCTGCACTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493268.1
CDS CAA 90 bp CCACCAGCTCCTGTTCCTGCTGCTGCACGGATTTCCCCGAAGCGCTaGGCTCCTTGGCTGTGGTCATGGTCTGTCCAGGCGCTTCCCACC +
Preference number: 6 (lower is better)
Translates to: PPAPVPAAARISPKR*APWLWSWSVQALPT
Trigger: GGTGGGAAGCGCCTGGACAGACCATGACCACAGCCAAGGAGCCAAGCGCTTCGGGGAAATCCGTGCAGCAGCAGGAACAGGAGCTGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332007.7
ENST00000427557.1
ENST00000462622.5
ENST00000496611.1
ENST00000619756.4
CDS CAA 90 bp GGTGATGTAGTACTCCCTGGAAACGCCAAACACAGCATGAGCAGCTaGGCAGGACCCCCGCACGACAGAAGCCAGGGGACCGCCGACCCC +
Preference number: 6 (lower is better)
Translates to: GDVVLPGNAKHSMSS*AGPPHDRSQGTADP
Trigger: GGGGTCGGCGGTCCCCTGGCTTCTGTCGTGCGGGGGTCCTGCCAAGCTGCTCATGCTGTGTTTGGCGTTTCCAGGGAGTACTACATCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478614.1
CDS CCA 72 bp GAAGGCCTTTGCTGTGCCCACATGTGTGTCCCTGGGTaGGTCCTGCTCCCTGATACCCATGGAGCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: EGLCCAHMCVPG*VLLPDTHGACS
Trigger: GCTGCAGGCTCCATGGGTATCAGGGAGCAGGACCCACCCAGGGACACACATGTGGGCACAGCAAAGGCCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS CAA 72 bp TGCTGCTGCACGGATTTCCCCGAAGCGCTTGGCTCCTaGGCTGTGGTCATGGTCTGTCCAGGCGCTTCCCAC +
Preference number: 6 (lower is better)
Translates to: CCCTDFPEALGS*AVVMVCPGASH
Trigger: GTGGGAAGCGCCTGGACAGACCATGACCACAGCCAAGGAGCCAAGCGCTTCGGGGAAATCCGTGCAGCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332007.7
ENST00000427557.1
ENST00000462622.5
ENST00000496611.1
ENST00000619756.4
CDS CAA 72 bp GTCACGTCCCAGTCCCCGGAGGTGATGGACTGGATGTaGTCGTTGCTGCTGTTGGGCTGGGACGAGGACACC +
Preference number: 6 (lower is better)
Translates to: VTSQSPEVMDWM*SLLLLGWDEDT
Trigger: GGTGTCCTCGTCCCAGCCCAACAGCAGCAACGACAACATCCAGTCCATCACCTCCGGGGACTGGGACGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
ENST00000427557.1
CDS CAA 72 bp GTACTCCCTGGAAACGCCAAACACAGCATGAGCAGCTaGGCAGGACCCCCGCACGACAGAAGCCAGGGGACC +
Preference number: 6 (lower is better)
Translates to: VLPGNAKHSMSS*AGPPHDRSQGT
Trigger: GGTCCCCTGGCTTCTGTCGTGCGGGGGTCCTGCCAAGCTGCTCATGCTGTGTTTGGCGTTTCCAGGGAGTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478614.1
CDS CAA 90 bp CCAGACTCATCTCAATGGGAGTGCAGGCCGGGCATCGCTCTGGATTaGCAGTTGTCCTTCAGACCGCATGAGGGCAGGCGGCTGAGCAGC +
Preference number: 6 (lower is better)
Translates to: PDSSQWECRPGIALD*QLSFRPHEGRRLSS
Trigger: GCTGCTCAGCCGCCTGCCCTCATGCGGTCTGAAGGACAACTGCAAATCCAGAGCGATGCCCGGCCTGCACTCCCATTGAGATGAGTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493268.1
CDS TCA 72 bp ACCTGCCACACTCGTATGACAATGGACAGTGCTGCCTaGGGGCTGCAGGTGCATGGCTGCGAAGCCTGGTGC +
Preference number: 6 (lower is better)
Translates to: TCHTRMTMDSAA*GLQVHGCEAWC
Trigger: GCACCAGGCTTCGCAGCCATGCACCTGCAGCCCTCAGGCAGCACTGTCCATTGTCATACGAGTGTGGCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406326.5
ENST00000619756.4
CDS TCA 72 bp CCGCATGAGGGCAGGCGGCTGAGCAGCGCCATGCAATaGCCACATGTCTGGAAGAACAGGCTCTGTTGGAGC +
Preference number: 6 (lower is better)
Translates to: PHEGRRLSSAMQ*PHVWKNRLCWS
Trigger: GCTCCAACAGAGCCTGTTCTTCCAGACATGTGGTCATTGCATGGCGCTGCTCAGCCGCCTGCCCTCATGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493268.1
CDS GCA 72 bp TTCCCAAACACGGCCACGCGCGTCCTGTCAATGTACTaGTCCTTCAGCATCGTCCGCACGGCCTCCATCTGG +
Preference number: 6 (lower is better)
Translates to: FPNTATRVLSMY*SFSIVRTASIW
Trigger: CCAGATGGAGGCCGTGCGGACGATGCTGAAGGAGCAGTACATTGACAGGACGCGCGTGGCCGTGTTTGGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
ENST00000427557.1
ENST00000484789.5
CDS GCA 72 bp GCCTCACACCTGCCACACTCGTATGACAATGGACAGTaGTGCCTGAGGGCTGCAGGTGCATGGCTGCGAAGC +
Preference number: 6 (lower is better)
Translates to: ASHLPHSYDNGQ*CLRAAGAWLRS
Trigger: GCTTCGCAGCCATGCACCTGCAGCCCTCAGGCAGCACTGTCCATTGTCATACGAGTGTGGCAGGTGTGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406326.5
ENST00000619756.4
CDS GCA 72 bp CTGTGCTGGCAGCAGAGGCTGCAAGGCTCACTCGGTTaGTCTCTGGCCCGAAATCTGCCTGTAGCTGCTGTG +
Preference number: 6 (lower is better)
Translates to: LCWQQRLQGSLG*SLARNLPVAAV
Trigger: CACAGCAGCTACAGGCAGATTTCGGGCCAGAGAGCAACCGAGTGAGCCTTGCAGCCTCTGCTGCCAGCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS GCA 72 bp CTACCTCCTTGCCTGCTCAGTGCCTTCAAGGCTGGATaGTCAGACGAGCTGCAGCCTCCGAAGGGAAGACCC +
Preference number: 6 (lower is better)
Translates to: LPPCLLSAFKAG*SDELQPPKGRP
Trigger: GGGTCTTCCCTTCGGAGGCTGCAGCTCGTCTGAGCATCCAGCCTTGAAGGCACTGAGCAGGCAAGGAGGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS GCA 72 bp GCAGGCCTCCCCAGAGAAAAGCCCTACCTCCTTGCCTaGTCAGTGCCTTCAAGGCTGGATGCTCAGACGAGC +
Preference number: 6 (lower is better)
Translates to: AGLPREKPYLLA*SVPSRLDAQTS
Trigger: GCTCGTCTGAGCATCCAGCCTTGAAGGCACTGAGCAGGCAAGGAGGTAGGGCTTTTCTCTGGGGAGGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS GCA 72 bp GGGGCCAACAAGTGGCTTAGGGCGCAAGTCCTGGTCTaGACATGCTCAGCACAAGGCCGACACGAGACAGAC +
Preference number: 6 (lower is better)
Translates to: GANKWLRAQVLV*TCSAQGRHETD
Trigger: GTCTGTCTCGTGTCGGCCTTGTGCTGAGCATGTGCAGACCAGGACTTGCGCCCTAAGCCACTTGTTGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS GCA 72 bp TTTGCTGTGCCCACATGTGTGTCCCTGGGTGGGTCCTaGTCCCTGATACCCATGGAGCCTGCAGCGATGCAG +
Preference number: 6 (lower is better)
Translates to: FAVPTCVSLGGS*SLIPMEPAAMQ
Trigger: CTGCATCGCTGCAGGCTCCATGGGTATCAGGGAGCAGGACCCACCCAGGGACACACATGTGGGCACAGCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS CCA 72 bp AGCCCTACCTCCTTGCCTGCTCAGTGCCTTCAAGGCTaGATGCTCAGACGAGCTGCAGCCTCCGAAGGGAAG +
Preference number: 6 (lower is better)
Translates to: SPTSLPAQCLQG*MLRRAAASEGK
Trigger: CTTCCCTTCGGAGGCTGCAGCTCGTCTGAGCATCCAGCCTTGAAGGCACTGAGCAGGCAAGGAGGTAGGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS CCA 72 bp AGGGAGGGGCCAACAAGTGGCTTAGGGCGCAAGTCCTaGTCTGCACATGCTCAGCACAAGGCCGACACGAGA +
Preference number: 6 (lower is better)
Translates to: REGPTSGLGRKS*SAHAQHKADTR
Trigger: TCTCGTGTCGGCCTTGTGCTGAGCATGTGCAGACCAGGACTTGCGCCCTAAGCCACTTGTTGGCCCCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS CAA 72 bp CCTGTGCTGGCAGCAGAGGCTGCAAGGCTCACTCGGTaGCTCTCTGGCCCGAAATCTGCCTGTAGCTGCTGT +
Preference number: 6 (lower is better)
Translates to: PVLAAEAARLTR*LSGPKSACSCC
Trigger: ACAGCAGCTACAGGCAGATTTCGGGCCAGAGAGCAACCGAGTGAGCCTTGCAGCCTCTGCTGCCAGCACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS CAA 72 bp TCTCAATGGGAGTGCAGGCCGGGCATCGCTCTGGATTaGCAGTTGTCCTTCAGACCGCATGAGGGCAGGCGG +
Preference number: 6 (lower is better)
Translates to: SQWECRPGIALD*QLSFRPHEGRR
Trigger: CCGCCTGCCCTCATGCGGTCTGAAGGACAACTGCAAATCCAGAGCGATGCCCGGCCTGCACTCCCATTGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493268.1
CDS TCA 72 bp CGGCGACCTTGGTGCTGGTGGCCCACTTCACCATGGTaGTGTAGTACTCCCTCATCCGTGGATCATCAGGCG +
Preference number: 6 (lower is better)
Translates to: RRPWCWWPTSPW*CSTPSSVDHQA
Trigger: CGCCTGATGATCCACGGATGAGGGAGTACTACATCACCATGGTGAAGTGGGCCACCAGCACCAAGGTCGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
ENST00000427557.1
CDS TCA 72 bp GAGCAGATGCGATGCCTCACACCTGCCACACTCGTATaGCAATGGACAGTGCTGCCTGAGGGCTGCAGGTGC +
Preference number: 6 (lower is better)
Translates to: EQMRCLTPATLV*QWTVLPEGCRC
Trigger: GCACCTGCAGCCCTCAGGCAGCACTGTCCATTGTCATACGAGTGTGGCAGGTGTGAGGCATCGCATCTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406326.5
ENST00000619756.4
CDS TCA 72 bp CATCGCTCTGGATTTGCAGTTGTCCTTCAGACCGCATaGGGGCAGGCGGCTGAGCAGCGCCATGCAATGACC +
Preference number: 6 (lower is better)
Translates to: HRSGFAVVLQTA*GQAAEQRHAMT
Trigger: GGTCATTGCATGGCGCTGCTCAGCCGCCTGCCCTCATGCGGTCTGAAGGACAACTGCAAATCCAGAGCGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493268.1
CDS GCA 72 bp TCACACCTGCCACACTCGTATGACAATGGACAGTGCTaGCTGAGGGCTGCAGGTGCATGGCTGCGAAGCCTG +
Preference number: 6 (lower is better)
Translates to: SHLPHSYDNGQC*LRAAGAWLRSL
Trigger: CAGGCTTCGCAGCCATGCACCTGCAGCCCTCAGGCAGCACTGTCCATTGTCATACGAGTGTGGCAGGTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406326.5
ENST00000619756.4
CDS GCA 72 bp AACAAGTGGCTTAGGGCGCAAGTCCTGGTCTGCACATaGTCAGCACAAGGCCGACACGAGACAGACGCTCCC +
Preference number: 6 (lower is better)
Translates to: NKWLRAQVLVCT*SAQGRHETDAP
Trigger: GGGAGCGTCTGTCTCGTGTCGGCCTTGTGCTGAGCATGTGCAGACCAGGACTTGCGCCCTAAGCCACTTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS GCA 72 bp GTCGCGGCGGGGGTCCCTGGTAGATGCGCTTCTCCCTaGCTTCTTGTCATTCTCAGAACCCAAGTCCACAGT +
Preference number: 6 (lower is better)
Translates to: VAAGVPGRCASP*LLVILRTQVHS
Trigger: ACTGTGGACTTGGGTTCTGAGAATGACAAGAAGGCAGGGAGAAGCGCATCTACCAGGGACCCCCGCCGCGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479637.1
CDS CCA 72 bp ATCTTGGTCACGTCCCAGTCCCCGGAGGTGATGGACTaGATGTTGTCGTTGCTGCTGTTGGGCTGGGACGAG +
Preference number: 6 (lower is better)
Translates to: ILVTSQSPEVMD*MLSLLLLGWDE
Trigger: CTCGTCCCAGCCCAACAGCAGCAACGACAACATCCAGTCCATCACCTCCGGGGACTGGGACGTGACCAAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
ENST00000427557.1
CDS CAA 90 bp AGGAACAAGCCTGTGCTGGCAGCAGAGGCTGCAAGGCTCACTCGGTaGCTCTCTGGCCCGAAATCTGCCTGTAGCTGCTGTGCATTATCC +
Preference number: 6 (lower is better)
Translates to: RNKPVLAAEAARLTR*LSGPKSACSCCALS
Trigger: GGATAATGCACAGCAGCTACAGGCAGATTTCGGGCCAGAGAGCAACCGAGTGAGCCTTGCAGCCTCTGCTGCCAGCACAGGCTTGTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS TCA 72 bp TGTCGTTGCTGCTGTTGGGCTGGGACGAGGACACCGTaGTGTGATAGAATTTCCCTCGTCCTCCCTGGGGGA +
Preference number: 6 (lower is better)
Translates to: CRCCCWAGTRTP*CDRISLVLPGG
Trigger: TCCCCCAGGGAGGACGAGGGAAATTCTATCACATCACGGTGTCCTCGTCCCAGCCCAACAGCAGCAACGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
ENST00000427557.1
CDS TCA 72 bp AGGCTAGGATCTTGGTCACGTCCCAGTCCCCGGAGGTaGTGGACTGGATGTTGTCGTTGCTGCTGTTGGGCT +
Preference number: 6 (lower is better)
Translates to: RLGSWSRPSPRR*WTGCCRCCCWA
Trigger: AGCCCAACAGCAGCAACGACAACATCCAGTCCATCACCTCCGGGGACTGGGACGTGACCAAGATCCTAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
ENST00000427557.1
CDS TCA 72 bp GAGAAGACAGTTAGGAGTCCTGGCAGTAACTCAGCATaGAGCAGCCTCGGGCAGGGAGACAGCCCCAGAGCA +
Preference number: 6 (lower is better)
Translates to: EKTVRSPGSNSA*SSLGQGDSPRA
Trigger: TGCTCTGGGGCTGTCTCCCTGCCCGAGGCTGCTTCATGCTGAGTTACTGCCAGGACTCCTAACTGTCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS GCA 72 bp GTGTTGAAGGAACAAGCCTGTGCTGGCAGCAGAGGCTaGAAGGCTCACTCGGTTGCTCTCTGGCCCGAAATC +
Preference number: 6 (lower is better)
Translates to: VLKEQACAGSRG*KAHSVALWPEI
Trigger: GATTTCGGGCCAGAGAGCAACCGAGTGAGCCTTGCAGCCTCTGCTGCCAGCACAGGCTTGTTCCTTCAACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS GCA 72 bp GGGGAGCCCTGTGTGATTTACTCTGAGAAGCCATTCTaGTGTTGTCGAAGCTCTGAGGGCCAGCCCTGGGGT +
Preference number: 6 (lower is better)
Translates to: GEPCVIYSEKPF*CCRSSEGQPWG
Trigger: ACCCCAGGGCTGGCCCTCAGAGCTTCGACAACAGCAGAATGGCTTCTCAGAGTAAATCACACAGGGCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481593.1
CDS GCA 72 bp TCTGGTGAGAGTCCACCGAAGTGCAGCAGGACTGAGTaGAGAGCTGACATGCGTTCACTGACCGGGTTCCAC +
Preference number: 6 (lower is better)
Translates to: SGESPPKCSRTE*RADMRSLTGFH
Trigger: GTGGAACCCGGTCAGTGAACGCATGTCAGCTCTGCACTCAGTCCTGCTGCACTTCGGTGGACTCTCACCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496611.1
CDS CCA 72 bp GCCACTGCACATGATTCTGAGGGAGGGGCCAACAAGTaGCTTAGGGCGCAAGTCCTGGTCTGCACATGCTCA +
Preference number: 6 (lower is better)
Translates to: ATAHDSEGGANK*LRAQVLVCTCS
Trigger: TGAGCATGTGCAGACCAGGACTTGCGCCCTAAGCCACTTGTTGGCCCCTCCCTCAGAATCATGTGCAGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS CCA 72 bp TGGCCCCAGGACATCCTGCTAGTGCGTAGTAACATGTaGTGTTGGTCAGAGGGAAGCAGTGGGGCAAGGCTC +
Preference number: 6 (lower is better)
Translates to: WPQDILLVRSNM*CWSEGSSGARL
Trigger: GAGCCTTGCCCCACTGCTTCCCTCTGACCAACACCACATGTTACTACGCACTAGCAGGATGTCCTGGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS CAA 72 bp CGCACTGCTTGCGTCCGAGATGCAACTCCTCTGCTTTaGCTTCCTCGCTGCATGCATGTGGCCCGATCACCT +
Preference number: 6 (lower is better)
Translates to: RTACVRDATPLL*LPRCMHVARSP
Trigger: AGGTGATCGGGCCACATGCATGCAGCGAGGAAGCAAAAGCAGAGGAGTTGCATCTCGGACGCAAGCAGTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493268.1
CDS TCA 72 bp AAATCTGCCTGTAGCTGCTGTGCATTATCCCCGGGGTaGGCAGATGCGATGCCTCACACCTGCCACACTCGT +
Preference number: 6 (lower is better)
Translates to: KSACSCCALSPG*ADAMPHTCHTR
Trigger: ACGAGTGTGGCAGGTGTGAGGCATCGCATCTGCTCACCCCGGGGATAATGCACAGCAGCTACAGGCAGATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406326.5
ENST00000619756.4
CDS TCA 72 bp GTTGCTAAGCAACACCCCACAGCTCCCCCGGAGAAATaGTGTCTCTGGGAGGTGGCACACAAAGGACACGTC +
Preference number: 6 (lower is better)
Translates to: VAKQHPTAPPEK*CLWEVAHKGHV
Trigger: GACGTGTCCTTTGTGTGCCACCTCCCAGAGACATCATTTCTCCGGGGGAGCTGTGGGGTGTTGCTTAGCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462622.5
CDS TCA 72 bp CGGCGACCTTGGTGCTGGTGGCCCACTTCACCATGGTaGTGTAGTACTCCCTGGAAACGCCAAACACAGCAT +
Preference number: 6 (lower is better)
Translates to: RRPWCWWPTSPW*CSTPWKRQTQH
Trigger: ATGCTGTGTTTGGCGTTTCCAGGGAGTACTACATCACCATGGTGAAGTGGGCCACCAGCACCAAGGTCGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478614.1
CDS GCA 72 bp GCAGCAGAGAGAGGATCCGAAGCAGGAAGCTGCCGCTaGTTAGTGGGGCTTCTCCAATTAGCAACAGCCTCT +
Preference number: 6 (lower is better)
Translates to: AAERGSEAGSCR*LVGLLQLATAS
Trigger: AGAGGCTGTTGCTAATTGGAGAAGCCCCACTAAGCAGCGGCAGCTTCCTGCTTCGGATCCTCTCTCTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000462622.5
ENST00000496611.1
CDS CCA 72 bp GGGCTTCACGGTGGGGTAGATGGAGCCGGTGTAAGTTaGGAGCTCCATGATGGGGACACGGGAATCATTGAT +
Preference number: 6 (lower is better)
Translates to: GLHGGVDGAGVS*ELHDGDTGIID
Trigger: ATCAATGATTCCCGTGTCCCCATCATGGAGCTCCCAACTTACACCGGCTCCATCTACCCCACCGTGAAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
ENST00000427557.1
CDS CCA 72 bp ATTTTCACACGACCCTCCCTGGAACTTGGATTCTCCTaGAGCTCTCTGGGCAACCCTGGAGAACGGGAGGCA +
Preference number: 6 (lower is better)
Translates to: IFTRPSLELGFS*SSLGNPGEREA
Trigger: TGCCTCCCGTTCTCCAGGGTTGCCCAGAGAGCTCCAGGAGAATCCAAGTTCCAGGGAGGGTCGTGTGAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481593.1
CDS CCA 72 bp CAACTCCTCTGCTTTTGCTTCCTCGCTGCATGCATGTaGCCCGATCACCTAAGCTGTGGTGCCTCAGCTTCC +
Preference number: 6 (lower is better)
Translates to: QLLCFCFLAACM*PDHLSCGASAS
Trigger: GGAAGCTGAGGCACCACAGCTTAGGTGATCGGGCCACATGCATGCAGCGAGGAAGCAAAAGCAGAGGAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493268.1
CDS CCA 72 bp ACTCATCTCAATGGGAGTGCAGGCCGGGCATCGCTCTaGATTTGCAGTTGTCCTTCAGACCGCATGAGGGCA +
Preference number: 6 (lower is better)
Translates to: THLNGSAGRASL*ICSCPSDRMRA
Trigger: TGCCCTCATGCGGTCTGAAGGACAACTGCAAATCCAGAGCGATGCCCGGCCTGCACTCCCATTGAGATGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493268.1
CDS CAA 90 bp CAGTATTTCTTGGGCCTGATGACAGCGTGTCTCTCTCCACCAGTGTaGAAGGAACAAGCCTGTGCTGGCAGCAGAGGCTGCAAGGCTCAC +
Preference number: 6 (lower is better)
Translates to: QYFLGLMTACLSPPV*KEQACAGSRGCKAH
Trigger: GTGAGCCTTGCAGCCTCTGCTGCCAGCACAGGCTTGTTCCTTCAACACTGGTGGAGAGAGACACGCTGTCATCAGGCCCAAGAAATACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406326.5
CDS CAA 90 bp TCTCCCTGCCTTCTTGTCATTCTCAGAACCCAAGTCCACAGTCCGTaGAGCTGTTCCTGCAGCATCTCGCACGGCCTCCATCTGGTCCTT +
Preference number: 6 (lower is better)
Translates to: SPCLLVILRTQVHSP*SCSCSISHGLHLVL
Trigger: AAGGACCAGATGGAGGCCGTGCGAGATGCTGCAGGAACAGCTCAACGGACTGTGGACTTGGGTTCTGAGAATGACAAGAAGGCAGGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479637.1
CDS CAA 90 bp TCTGCACTGGCGCGGGACTCTGAGGGGCCGCCCAGTCATTACCTCTaGCTAAATAAACCCAAAGACACTGGGAGTTGCATGTCACTGCGT +
Preference number: 6 (lower is better)
Translates to: SALARDSEGPPSHYL*LNKPKDTGSCMSLR
Trigger: ACGCAGTGACATGCAACTCCCAGTGTCTTTGGGTTTATTTAGCAAGAGGTAATGACTGGGCGGCCCCTCAGAGTCCCGCGCCAGTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478614.1
CDS CAA 90 bp GAGCAGCGCCATGCAATGACCACATGTCTGGAAGAACAGGCTCTGTaGGAGCCGCACTGCTTGCGTCCGAGATGCAACTCCTCTGCTTTT +
Preference number: 6 (lower is better)
Translates to: EQRHAMTTCLEEQAL*EPHCLRPRCNSSAF
Trigger: AAAAGCAGAGGAGTTGCATCTCGGACGCAAGCAGTGCGGCTCCAACAGAGCCTGTTCTTCCAGACATGTGGTCATTGCATGGCGCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493268.1
CDS TCA 72 bp GCTGCTCCGTGGGTTTTGAGGTCTCGTCTCTCCAGCTaGTGCCTTGACTTTCACACCGCAGTACCAGGCAAA +
Preference number: 6 (lower is better)
Translates to: AAPWVLRSRLSS*CLDFHTAVPGK
Trigger: TTTGCCTGGTACTGCGGTGTGAAAGTCAAGGCATCAGCTGGAGAGACGAGACCTCAAAACCCACGGAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471100.5
ENST00000478614.1
ENST00000481593.1
CDS TCA 72 bp CCACAGCACAGGCGTGTCTGCTGCAGTAGAAGGCCCTaGACACCCGTCAGGTCTTTCTCCATGAAAGGAATG +
Preference number: 6 (lower is better)
Translates to: PQHRRVCCSRRP*TPVRSFSMKGM
Trigger: CATTCCTTTCATGGAGAAAGACCTGACGGGTGTTCAGGGCCTTCTACTGCAGCAGACACGCCTGTGCTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS TCA 72 bp CTGTTGTGGACGGGCCACGGGTTGGTTGTGGGAAAGTaGGTTCAGTTCTGGGAAGGGTACCCCTCTTTCACT +
Preference number: 6 (lower is better)
Translates to: LLWTGHGLVVGK*VQFWEGYPSFT
Trigger: AGTGAAAGAGGGGTACCCTTCCCAGAACTGAACTCACTTTCCCACAACCAACCCGTGGCCCGTCCACAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS GCA 72 bp ACAAGGGAACTCAAGTGTGGTGTAACCCCGTCCTTCTaGCCCTCTTCATCCACACTGGGGTCCAACTCCCTT +
Preference number: 6 (lower is better)
Translates to: TRELKCGVTPSF*PSSSTLGSNSL
Trigger: AAGGGAGTTGGACCCCAGTGTGGATGAAGAGGGGCAGAAGGACGGGGTTACACCACACTTGAGTTCCCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS CCA 72 bp CCACAGCTCCCCCGGAGAAATGATGTCTCTGGGAGGTaGCACACAAAGGACACGTCTTCAGCAGACCCATTT +
Preference number: 6 (lower is better)
Translates to: PQLPRRNDVSGR*HTKDTSSADPF
Trigger: AAATGGGTCTGCTGAAGACGTGTCCTTTGTGTGCCACCTCCCAGAGACATCATTTCTCCGGGGGAGCTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462622.5
CDS CCA 72 bp AACTCAGCATTATGCGACGTGCGCCTTCTCCGCTTCTaGGCCTTGGTGTCAAGGGACGTGAGGATGAAATGC +
Preference number: 6 (lower is better)
Translates to: NSALCDVRLLRF*ALVSRDVRMKC
Trigger: GCATTTCATCCTCACGTCCCTTGACACCAAGGCCCAGAAGCGGAGAAGGCGCACGTCGCATAATGCTGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS CCA 72 bp CAGTGGGGACCCGGACATGCAGTAGTTACCTGTCTGTaGAGCCAGGCCTCACTTTCATCCTCGTGTTTCTTC +
Preference number: 6 (lower is better)
Translates to: QWGPGHAVVTCL*SQASLSSSCFF
Trigger: GAAGAAACACGAGGATGAAAGTGAGGCCTGGCTCCACAGACAGGTAACTACTGCATGTCCGGGTCCCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478614.1
ENST00000481593.1
CDS CCA 72 bp CGAGCTTCTGAAATCTGGCTTATAAAGAATCTGCACTaGCGCGGGACTCTGAGGGGCCGCCCAGTCATTACC +
Preference number: 6 (lower is better)
Translates to: RASEIWLIKNLH*RGTLRGRPVIT
Trigger: GGTAATGACTGGGCGGCCCCTCAGAGTCCCGCGCCAGTGCAGATTCTTTATAAGCCAGATTTCAGAAGCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478614.1
CDS CAA 72 bp GTTGAGCATGTGCTGATTTTCCAACCTGCTGGGACCTaGCTCATCACCGACCACCACAGCACAGGCGTGTCT +
Preference number: 6 (lower is better)
Translates to: VEHVLIFQPAGT*LITDHHSTGVS
Trigger: AGACACGCCTGTGCTGTGGTGGTCGGTGATGAGCAAGGTCCCAGCAGGTTGGAAAATCAGCACATGCTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS CAA 72 bp GCGCGGGACTCTGAGGGGCCGCCCAGTCATTACCTCTaGCTAAATAAACCCAAAGACACTGGGAGTTGCATG +
Preference number: 6 (lower is better)
Translates to: ARDSEGPPSHYL*LNKPKDTGSCM
Trigger: CATGCAACTCCCAGTGTCTTTGGGTTTATTTAGCAAGAGGTAATGACTGGGCGGCCCCTCAGAGTCCCGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478614.1
CDS CAA 72 bp CATGCAATGACCACATGTCTGGAAGAACAGGCTCTGTaGGAGCCGCACTGCTTGCGTCCGAGATGCAACTCC +
Preference number: 6 (lower is better)
Translates to: HAMTTCLEEQAL*EPHCLRPRCNS
Trigger: GGAGTTGCATCTCGGACGCAAGCAGTGCGGCTCCAACAGAGCCTGTTCTTCCAGACATGTGGTCATTGCATG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493268.1
CDS CAA 90 bp TCCTTCAGGCTCAGCGTCTCTTTATGGCATTTCTTACCGCCTCCCTaGTCTGTGGGTGAGGCCAAGCCACTGCACATGATTCTGAGGGAG +
Preference number: 6 (lower is better)
Translates to: SFRLSVSLWHFLPPP*SVGEAKPLHMILRE
Trigger: CTCCCTCAGAATCATGTGCAGTGGCTTGGCCTCACCCACAGACAAGGGAGGCGGTAAGAAATGCCATAAAGAGACGCTGAGCCTGAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS CAA 90 bp TCCAACTCAGCATTATGCGACGTGCGCCTTCTCCGCTTCTGGGCCTaGGTGTCAAGGGACGTGAGGATGAAATGCAACGGCGAATTGGAA +
Preference number: 6 (lower is better)
Translates to: SNSALCDVRLLRFWA*VSRDVRMKCNGELE
Trigger: TTCCAATTCGCCGTTGCATTTCATCCTCACGTCCCTTGACACCAAGGCCCAGAAGCGGAGAAGGCGCACGTCGCATAATGCTGAGTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS TCA 72 bp AGTTCTCAACCAGGTCACAGGAGAGGCACTGCCTGTTaGAGTTGCCCACCGTGTTGGCACTGTAGAGTTGTC +
Preference number: 6 (lower is better)
Translates to: SSQPGHRRGTAC*SCPPCWHCRVV
Trigger: GACAACTCTACAGTGCCAACACGGTGGGCAACTTCAACAGGCAGTGCCTCTCCTGTGACCTGGTTGAGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
ENST00000427557.1
ENST00000493268.1
CDS TCA 72 bp CCTGCAATCCTCCAGCCAGGGTCTCCATGGAATATCTaGAACAGGTCCCCCTTGTACATGGCAAGCTGGCAA +
Preference number: 6 (lower is better)
Translates to: PAILQPGSPWNI*NRSPLYMASWQ
Trigger: TTGCCAGCTTGCCATGTACAAGGGGGACCTGTTTCAGATATTCCATGGAGACCCTGGCTGGAGGATTGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406326.5
ENST00000619756.4
CDS TCA 72 bp GTGGGTTTTGAGGTCTCGTCTCTCCAGCTGATGCCTTaGCTTTCACACCGCAGTACCAGGCAAACGCACAAC +
Preference number: 6 (lower is better)
Translates to: VGFEVSSLQLMP*LSHRSTRQTHN
Trigger: GTTGTGCGTTTGCCTGGTACTGCGGTGTGAAAGTCAAGGCATCAGCTGGAGAGACGAGACCTCAAAACCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471100.5
CDS TCA 72 bp TTTATGGCATTTCTTACCGCCTCCCTTGTCTGTGGGTaGGGCCAAGCCACTGCACATGATTCTGAGGGAGGG +
Preference number: 6 (lower is better)
Translates to: FMAFLTASLVCG*GQATAHDSEGG
Trigger: CCCTCCCTCAGAATCATGTGCAGTGGCTTGGCCTCACCCACAGACAAGGGAGGCGGTAAGAAATGCCATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS TCA 72 bp TTCTTGTCATTCTCAGAACCCAAGTCCACAGTCCGTTaGGCTGTTCCTGCAGCATCTCGCACGGCCTCCATC +
Preference number: 6 (lower is better)
Translates to: FLSFSEPKSTVR*AVPAASRTASI
Trigger: GATGGAGGCCGTGCGAGATGCTGCAGGAACAGCTCAACGGACTGTGGACTTGGGTTCTGAGAATGACAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479637.1
CDS GCA 72 bp AACAGCCTCTGCAATCGCCACAGAAACAATGATAACTaGTTAGCAACCGGCAAGTGGCGGCTGGGTGCAGGA +
Preference number: 6 (lower is better)
Translates to: NSLCNRHRNNDN*LATGKWRLGAG
Trigger: TCCTGCACCCAGCCGCCACTTGCCGGTTGCTAAGCAGTTATCATTGTTTCTGTGGCGATTGCAGAGGCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332007.7
ENST00000462622.5
CDS GCA 72 bp ATGCAAGCAGCAGAGAGAGGATCCGAAGCAGGAAGCTaGCGCTGCTTAGTGGGGCTTCTCCAATTAGCAACA +
Preference number: 6 (lower is better)
Translates to: MQAAERGSEAGS*RCLVGLLQLAT
Trigger: TGTTGCTAATTGGAGAAGCCCCACTAAGCAGCGGCAGCTTCCTGCTTCGGATCCTCTCTCTGCTGCTTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000462622.5
ENST00000496611.1
CDS GCA 72 bp ACAAGCAGTGCAATTGCTATTCCTTTCCAATTCCTCTaGGGAGGGTTACTCCCCACCAGCTCGTCCTCCTCG +
Preference number: 6 (lower is better)
Translates to: TSSAIAIPFQFL*GGLLPTSSSSS
Trigger: CGAGGAGGACGAGCTGGTGGGGAGTAACCCTCCGCAGAGGAATTGGAAAGGAATAGCAATTGCACTGCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377770.8
ENST00000406326.5
CDS GCA 72 bp TTCCAGGTCTTCAGTTTTCTCACCTCCGCGCACCCCTaGCCGTGTCTTTACTCAGCGGATCCCAATAGCAAT +
Preference number: 6 (lower is better)
Translates to: FQVFSFLTSAHP*PCLYSADPNSN
Trigger: ATTGCTATTGGGATCCGCTGAGTAAAGACACGGGCAGGGGTGCGCGGAGGTGAGAAAACTGAAGACCTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404039.5
CDS GCA 72 bp GAAAGTGGGGGTGAGGCATGGGGAAGCGATGTCTTGTaGACGAAGGACCTGGACTCACCACTTATCCACTTA +
Preference number: 6 (lower is better)
Translates to: ESGGEAWGSDVL*TKDLDSPLIHL
Trigger: TAAGTGGATAAGTGGTGAGTCCAGGTCCTTCGTGCACAAGACATCGCTTCCCCATGCCTCACCCCCACTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462622.5
CDS GCA 72 bp GAAATGCAACGGCGAATTGGAAAGGCAAGTGTGGACTaGACAGGTGTAAGGTGCTGTCCTTCAGGCTCAGCG +
Preference number: 6 (lower is better)
Translates to: EMQRRIGKASVD*TGVRCCPSGSA
Trigger: CGCTGAGCCTGAAGGACAGCACCTTACACCTGTGCAGTCCACACTTGCCTTTCCAATTCGCCGTTGCATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS CAA 72 bp AGGATGGGGGAGGGAGGGTGGGTAGACAAGACGAGTTaGCTCTTTAAATGCAAGCAGCAGAGAGAGGATCCG +
Preference number: 6 (lower is better)
Translates to: RMGEGGWVDKTS*LFKCKQQREDP
Trigger: CGGATCCTCTCTCTGCTGCTTGCATTTAAAGAGCAAACTCGTCTTGTCTACCCACCCTCCCTCCCCCATCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332007.7
ENST00000462622.5
ENST00000496611.1
ENST00000619756.4
CDS TCA 72 bp CGATCACCTAAGCTGTGGTGCCTCAGCTTCCTTAGCTaGCAAGTGGGGATAATAGCAGTTCCTGCCTCACAG +
Preference number: 6 (lower is better)
Translates to: RSPKLWCLSFLS*QVGIIAVPASQ
Trigger: CTGTGAGGCAGGAACTGCTATTATCCCCACTTGTCAGCTAAGGAAGCTGAGGCACCACAGCTTAGGTGATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493268.1
CDS GCA 72 bp ACAAGCAGTGCAATTGCTATTCCTTTCCAATTCCTCTaGGGAGGGTTACTCCCCACCAGCTCCTGTTCCTGC +
Preference number: 6 (lower is better)
Translates to: TSSAIAIPFQFL*GGLLPTSSCSC
Trigger: GCAGGAACAGGAGCTGGTGGGGAGTAACCCTCCGCAGAGGAATTGGAAAGGAATAGCAATTGCACTGCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332007.7
ENST00000427557.1
ENST00000462622.5
ENST00000496611.1
ENST00000619756.4
CDS GCA 72 bp GTAGGCGAGTCTCGTGCCATCCGGAGACCACCAGTGTaGGATGTGTGTCTTCAAAATCTCCTCTTCATACAG +
Preference number: 6 (lower is better)
Translates to: VGESRAIRRPPV*DVCLQNLLFIQ
Trigger: CTGTATGAAGAGGAGATTTTGAAGACACACATCGCACACTGGTGGTCTCCGGATGGCACGAGACTCGCCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
ENST00000427557.1
CDS GCA 72 bp CACTGTAGAGTTGTCGTCTCCGAGGCAGGTCCTCCGTaGTCAGGAAGTAGATCTTATTCCCCTTCTCATCGT +
Preference number: 6 (lower is better)
Translates to: HCRVVVSEAGPP*SGSRSYSPSHR
Trigger: ACGATGAGAAGGGGAATAAGATCTACTTCCTGAGCACGGAGGACCTGCCTCGGAGACGACAACTCTACAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
ENST00000427557.1
ENST00000493268.1
CDS CCA 72 bp ACCTTGGTCATCTCGTATGCTCTGTTGTCAAGTCCATaGAGGCCCAAGTACCTCTCGGAAAACGCAGAGGCA +
Preference number: 6 (lower is better)
Translates to: TLVISYALLSSP*RPKYLSENAEA
Trigger: TGCCTCTGCGTTTTCCGAGAGGTACTTGGGCCTCCATGGACTTGACAACAGAGCATACGAGATGACCAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
ENST00000427557.1
ENST00000480367.1
CDS CCA 72 bp ATCAGGAACTGCTGTTCTTCCAGCGCGGAGACTCGATaGGCTACCTTGGTCATCTCGTATGCTCTGTTGTCA +
Preference number: 6 (lower is better)
Translates to: IRNCCSSSAETR*ATLVISYALLS
Trigger: TGACAACAGAGCATACGAGATGACCAAGGTAGCCCATCGAGTCTCCGCGCTGGAAGAACAGCAGTTCCTGAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
ENST00000427557.1
ENST00000480367.1
CDS CCA 72 bp AAGGGTACCCCTCTTTCACTACTGCCTAGCTACAGATaGCCCCAGGACATCCTGCTAGTGCGTAGTAACATG +
Preference number: 6 (lower is better)
Translates to: KGTPLSLLPSYR*PQDILLVRSNM
Trigger: CATGTTACTACGCACTAGCAGGATGTCCTGGGGCCATCTGTAGCTAGGCAGTAGTGAAAGAGGGGTACCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS CAA 72 bp CTCAGCGTCTCTTTATGGCATTTCTTACCGCCTCCCTaGTCTGTGGGTGAGGCCAAGCCACTGCACATGATT +
Preference number: 6 (lower is better)
Translates to: LSVSLWHFLPPP*SVGEAKPLHMI
Trigger: AATCATGTGCAGTGGCTTGGCCTCACCCACAGACAAGGGAGGCGGTAAGAAATGCCATAAAGAGACGCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS CAA 90 bp GCCTGCCTGTCATCTGTCCCCAAGGAGCTCTCCCATTCATTCATGTaGGACCTGAAGAGACCATTGGGTCATACCTGTTCCACCAAAGGA +
Preference number: 6 (lower is better)
Translates to: ACLSSVPKELSHSFM*DLKRPLGHTCSTKG
Trigger: TCCTTTGGTGGAACAGGTATGACCCAATGGTCTCTTCAGGTCCAACATGAATGAATGGGAGAGCTCCTTGGGGACAGATGACAGGCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS CAA 90 bp CCCAAGGAGCTCTCCCATTCATTCATGTTGGACCTGAAGAGACCATaGGGTCATACCTGTTCCACCAAAGGAGCAGAAGGCAGGAAGGAA +
Preference number: 6 (lower is better)
Translates to: PKELSHSFMLDLKRP*GHTCSTKGAEGRKE
Trigger: TTCCTTCCTGCCTTCTGCTCCTTTGGTGGAACAGGTATGACCCAATGGTCTCTTCAGGTCCAACATGAATGAATGGGAGAGCTCCTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS TCA 72 bp GAGGTCTCACCAAACATTCCACGCTCTGAAGAGCCGTaGTTTTCACACGACCCTCCCTGGAACTTGGATTCT +
Preference number: 6 (lower is better)
Translates to: EVSPNIPRSEEP*FSHDPPWNLDS
Trigger: AGAATCCAAGTTCCAGGGAGGGTCGTGTGAAAATCACGGCTCTTCAGAGCGTGGAATGTTTGGTGAGACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481593.1
CDS GCA 72 bp ACAAGCAGTGCAATTGCTATTCCTTTCCAATTCCTCTaGGGAGGGTTACTCCCCACCAGCTCCATCACGTTC +
Preference number: 6 (lower is better)
Translates to: TSSAIAIPFQFL*GGLLPTSSITF
Trigger: GAACGTGATGGAGCTGGTGGGGAGTAACCCTCCGCAGAGGAATTGGAAAGGAATAGCAATTGCACTGCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404039.5
CDS CCA 72 bp GGAAAACGCAGAGGCATAGAGTTTGAAGTCTGTTATTaGAGAGAGAGCAGAGCCGCAGGTGAATGTCTGGCC +
Preference number: 6 (lower is better)
Translates to: GKRRGIEFEVCY*RESRAAGECLA
Trigger: GGCCAGACATTCACCTGCGGCTCTGCTCTCTCTCCAATAACAGACTTCAAACTCTATGCCTCTGCGTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
ENST00000427557.1
ENST00000480367.1
CDS CAA 72 bp TCCTCCTCGTCCTCTTTCGCTGTGACTGTCAGCAGTTaGTCCTGGATCCTGAAGCATTCCACGAAGAAGTTG +
Preference number: 6 (lower is better)
Translates to: SSSSSFAVTVSS*SWILKHSTKKL
Trigger: CAACTTCTTCGTGGAATGCTTCAGGATCCAGGACAAACTGCTGACAGTCACAGCGAAAGAGGACGAGGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
ENST00000427557.1
CDS CAA 72 bp GGGAAATCCGAGAGGCAAATTACTAGACCCAACCTATaGAAAGTGGGGGTGAGGCATGGGGAAGCGATGTCT +
Preference number: 6 (lower is better)
Translates to: GKSERQITRPNL*KVGVRHGEAMS
Trigger: AGACATCGCTTCCCCATGCCTCACCCCCACTTTCAATAGGTTGGGTCTAGTAATTTGCCTCTCGGATTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462622.5
CDS CAA 72 bp GCAGTTCCTGCCTCACAGGTTTTCTTATCTGTTGTGTaGTGCACCGTCACCATAGGAACACCAGGACCTTCG +
Preference number: 6 (lower is better)
Translates to: AVPASQVFLSVV*CTVTIGTPGPS
Trigger: CGAAGGTCCTGGTGTTCCTATGGTGACGGTGCACAACACAACAGATAAGAAAACCTGTGAGGCAGGAACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493268.1
CDS TCA 72 bp AAGGACACGTCTTCAGCAGACCCATTTCTCATTAAGTaGAGGCTGTGTGGATGCTCGGGAGGCAACACCATT +
Preference number: 6 (lower is better)
Translates to: KDTSSADPFLIK*RLCGCSGGNTI
Trigger: AATGGTGTTGCCTCCCGAGCATCCACACAGCCTTCACTTAATGAGAAATGGGTCTGCTGAAGACGTGTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462622.5
CDS TCA 72 bp TCCCCAAGGAGCTCTCCCATTCATTCATGTTGGACCTaGAGAGACCATTGGGTCATACCTGTTCCACCAAAG +
Preference number: 6 (lower is better)
Translates to: SPRSSPIHSCWT*RDHWVIPVPPK
Trigger: CTTTGGTGGAACAGGTATGACCCAATGGTCTCTTCAGGTCCAACATGAATGAATGGGAGAGCTCCTTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS CCA 72 bp AAATCACACCTTCCTTGCCAGTGGAGACCACACGGATaGCCTGTTTCCCGACATGTGCACAGTAGTAGATAT +
Preference number: 6 (lower is better)
Translates to: KSHLPCQWRPHG*PVSRHVHSSRY
Trigger: ATATCTACTACTGTGCACATGTCGGGAAACAGGCCATCCGTGTGGTCTCCACTGGCAAGGAAGGTGTGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
ENST00000427557.1
CDS CAA 72 bp CTCTCCCATTCATTCATGTTGGACCTGAAGAGACCATaGGGTCATACCTGTTCCACCAAAGGAGCAGAAGGC +
Preference number: 6 (lower is better)
Translates to: LSHSFMLDLKRP*GHTCSTKGAEG
Trigger: GCCTTCTGCTCCTTTGGTGGAACAGGTATGACCCAATGGTCTCTTCAGGTCCAACATGAATGAATGGGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS TCA 72 bp CATAGTCACGCAGGCAGTGAAGAGGAAGAGACATGGTaGTGTAATGAAGAAAACAGCCCTGGTGACAAGCTG +
Preference number: 6 (lower is better)
Translates to: HSHAGSEEEETW*CNEENSPGDKL
Trigger: CAGCTTGTCACCAGGGCTGTTTTCTTCATTACATCACCATGTCTCTTCCTCTTCACTGCCTGCGTGACTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406326.5
ENST00000619756.4
CDS TCA 72 bp GTAGAAGGCCCTGAACACCCGTCAGGTCTTTCTCCATaGAAGGAATGTCTTGCTCCAGGTTCAAAACAGAGT +
Preference number: 6 (lower is better)
Translates to: VEGPEHPSGLSP*KECLAPGSKQS
Trigger: ACTCTGTTTTGAACCTGGAGCAAGACATTCCTTTCATGGAGAAAGACCTGACGGGTGTTCAGGGCCTTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS GCA 72 bp CATACACATGGACCTTTGGAGCGTCCATGGTCAGTGTaGTTAACACTGCCATGCAACTGCCACACTTACTTT +
Preference number: 6 (lower is better)
Translates to: HTHGPLERPWSV*LTLPCNCHTYF
Trigger: AAAGTAAGTGTGGCAGTTGCATGGCAGTGTTAAGCACACTGACCATGGACGCTCCAAAGGTCCATGTGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS CCA 72 bp CCATCCTGCATACTGAAGTTTTGCATTGCTGACTTCTaGTGGGTCCAGACTTTGAGGATCCCCATGAGGAAT +
Preference number: 6 (lower is better)
Translates to: PSCILKFCIADF*WVQTLRIPMRN
Trigger: ATTCCTCATGGGGATCCTCAAAGTCTGGACCCACCAGAAGTCAGCAATGCAAAACTTCAGTATGCAGGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS CCA 72 bp TCGTCCTCTTTCGCTGTGACTGTCAGCAGTTTGTCCTaGATCCTGAAGCATTCCACGAAGAAGTTGATGATG +
Preference number: 6 (lower is better)
Translates to: SSSFAVTVSSLS*ILKHSTKKLMM
Trigger: CATCATCAACTTCTTCGTGGAATGCTTCAGGATCCAGGACAAACTGCTGACAGTCACAGCGAAAGAGGACGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
ENST00000427557.1
CDS CCA 72 bp TTTCCTTCATTTTGCCCCAAGTCCGAACCCGACTTCTaGTCCAGGGAAGAGAAACTTAATCCATTGTCCTGG +
Preference number: 6 (lower is better)
Translates to: FPSFCPKSEPDF*SREEKLNPLSW
Trigger: CCAGGACAATGGATTAAGTTTCTCTTCCCTGGACCAGAAGTCGGGTTCGGACTTGGGGCAAAATGAAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404039.5
CDS CCA 72 bp ATATCTTGGGGAGTTGCCCACATGAACACATACACATaGACCTTTGGAGCGTCCATGGTCAGTGTGCTTAAC +
Preference number: 6 (lower is better)
Translates to: ISWGVAHMNTYT*TFGASMVSVLN
Trigger: GTTAAGCACACTGACCATGGACGCTCCAAAGGTCCATGTGTATGTGTTCATGTGGGCAACTCCCCAAGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS GCA 72 bp CTGCTTAGTGGGGCTTCTCCAATTAGCAACAGCCTCTaGAATCGCCACAGAAACAATGATAACTGCTTAGCA +
Preference number: 6 (lower is better)
Translates to: LLSGASPISNSL*NRHRNNDNCLA
Trigger: TGCTAAGCAGTTATCATTGTTTCTGTGGCGATTGCAGAGGCTGTTGCTAATTGGAGAAGCCCCACTAAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332007.7
ENST00000462622.5
CDS GCA 72 bp GTTCATTTTCAATTCAGCAAGGTGCTGGCATCTAACTaGAAGCTGAGGTCTCACCAAACATTCCACGCTCTG +
Preference number: 6 (lower is better)
Translates to: VHFQFSKVLASN*KLRSHQTFHAL
Trigger: CAGAGCGTGGAATGTTTGGTGAGACCTCAGCTTGCAGTTAGATGCCAGCACCTTGCTGAATTGAAAATGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481593.1
CDS CCA 72 bp AGAGACAGAGCATGTGGCAGCGTGTGTGTGAGTATATaGGGGTGTGTGTGTGTGATATGTGTGTATAAACGT +
Preference number: 6 (lower is better)
Translates to: RDRACGSVCVSI*GCVCVICVYKR
Trigger: ACGTTTATACACACATATCACACACACACACCCCCATATACTCACACACACGCTGCCACATGCTCTGTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS CAA 72 bp ATGTGTGATCATGTGTGCCTGTGTGATCATGTGTGCTaGTGTGTGAGCATGTGTGTGTGTGAGCATGTATGG +
Preference number: 6 (lower is better)
Translates to: MCDHVCLCDHVC*CVSMCVCEHVW
Trigger: CCATACATGCTCACACACACACATGCTCACACACAAGCACACATGATCACACAGGCACACATGATCACACAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS GCA 72 bp GTGGGTCCAGACTTTGAGGATCCCCATGAGGAATTTTaGTCAGGACGTAATATCCAGTATACGAGTGTTGAT +
Preference number: 6 (lower is better)
Translates to: VGPDFEDPHEEF*SGRNIQYTSVD
Trigger: ATCAACACTCGTATACTGGATATTACGTCCTGAGCAAAATTCCTCATGGGGATCCTCAAAGTCTGGACCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS GCA 72 bp AATAAATATCAGCTGTTGGCCTTTAGGGCCCCATCCTaGATACTGAAGTTTTGCATTGCTGACTTCTGGTGG +
Preference number: 6 (lower is better)
Translates to: NKYQLLAFRAPS*ILKFCIADFWW
Trigger: CCACCAGAAGTCAGCAATGCAAAACTTCAGTATGCAGGATGGGGCCCTAAAGGCCAACAGCTGATATTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS CCA 72 bp TCCTGCATACTGAAGTTTTGCATTGCTGACTTCTGGTaGGTCCAGACTTTGAGGATCCCCATGAGGAATTTT +
Preference number: 6 (lower is better)
Translates to: SCILKFCIADFW*VQTLRIPMRNF
Trigger: AAAATTCCTCATGGGGATCCTCAAAGTCTGGACCCACCAGAAGTCAGCAATGCAAAACTTCAGTATGCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
CDS CAA 72 bp AACACCCGTCAGGTCTTTCTCCATGAAAGGAATGTCTaGCTCCAGGTTCAAAACAGAGTAACATGCGTACTG +
Preference number: 6 (lower is better)
Translates to: NTRQVFLHERNV*LQVQNRVTCVL
Trigger: CAGTACGCATGTTACTCTGTTTTGAACCTGGAGCAAGACATTCCTTTCATGGAGAAAGACCTGACGGGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS CAA 90 bp AAGCTGGGCTACAGGCTTGACTTACTGCTAATGAGTCACATGATTTaGAATGAGGCAATGTCAACTTCCTGGACTTCACTTTCTTCATGG +
Preference number: 6 (lower is better)
Translates to: KLGYRLDLLLMSHMI*NEAMSTSWTSLSSW
Trigger: CCATGAAGAAAGTGAAGTCCAGGAAGTTGACATTGCCTCATTCAAAATCATGTGACTCATTAGCAGTAAGTCAAGCCTGTAGCCCAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406326.5
ENST00000619756.4
CDS TCA 72 bp ATTGTCCTGGTGAGGATTAAAGTAGACTGGACTGGCTaGAGACTGGATGGAAACGGGTTTTTGAAGGAAAAA +
Preference number: 6 (lower is better)
Translates to: IVLVRIKVDWTG*RLDGNGFLKEK
Trigger: TTTTTCCTTCAAAAACCCGTTTCCATCCAGTCTTCAGCCAGTCCAGTCTACTTTAATCCTCACCAGGACAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404039.5
CDS TCA 72 bp GCTATCATTAATTATAAGAAAACGTTGAGCATGTGCTaGTTTTCCAACCTGCTGGGACCTTGCTCATCACCG +
Preference number: 6 (lower is better)
Translates to: AIINYKKTLSMC*FSNLLGPCSSP
Trigger: CGGTGATGAGCAAGGTCCCAGCAGGTTGGAAAATCAGCACATGCTCAACGTTTTCTTATAATTAATGATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS TCA 72 bp GCTGACATGCGTTCACTGACCGGGTTCCACATTGTATaGAAAAAGTGCATACTCTCTATCTGGAGATATTTC +
Preference number: 6 (lower is better)
Translates to: ADMRSLTGFHIV*KKCILSIWRYF
Trigger: GAAATATCTCCAGATAGAGAGTATGCACTTTTTTCATACAATGTGGAACCCGGTCAGTGAACGCATGTCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496611.1
CDS CAA 90 bp AAGTTTCATTTGGAAGCTATTCTACAAGAACTCCATGAGTTGCTTTaGGTCCTTCTGCCTAACGGAAAGAGAGCAAGAGAACAAAGGGGA +
Preference number: 6 (lower is better)
Translates to: KFHLEAILQELHELL*VLLPNGKRAREQRG
Trigger: TCCCCTTTGTTCTCTTGCTCTCTTTCCGTTAGGCAGAAGGACCAAAAGCAACTCATGGAGTTCTTGTAGAATAGCTTCCAAATGAAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462622.5
CDS CAA 90 bp CACTCCAAGTTTCATTTGGAAGCTATTCTACAAGAACTCCATGAGTaGCTTTTGGTCCTTCTGCCTAACGGAAAGAGAGCAAGAGAACAA +
Preference number: 6 (lower is better)
Translates to: HSKFHLEAILQELHE*LLVLLPNGKRAREQ
Trigger: TTGTTCTCTTGCTCTCTTTCCGTTAGGCAGAAGGACCAAAAGCAACTCATGGAGTTCTTGTAGAATAGCTTCCAAATGAAACTTGGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462622.5
CDS TCA 72 bp TCACTGAAGAGATCTTCTACAGTGACCTTCTTCTTTTaGGACAGACTATTATCTTCCGCTGGTGTCAGAAGT +
Preference number: 6 (lower is better)
Translates to: SLKRSSTVTFFF*DRLLSSAGVRS
Trigger: ACTTCTGACACCAGCGGAAGATAATAGTCTGTCTCAAAAGAAGAAGGTCACTGTAGAAGATCTCTTCAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
ENST00000406326.5
ENST00000427557.1
ENST00000462622.5
ENST00000496611.1
ENST00000619756.4
CDS TCA 72 bp TACAGAGCGGAGCTATCATTAATTATAAGAAAACGTTaGGCATGTGCTGATTTTCCAACCTGCTGGGACCTT +
Preference number: 6 (lower is better)
Translates to: YRAELSLIIRKR*ACADFPTCWDL
Trigger: AAGGTCCCAGCAGGTTGGAAAATCAGCACATGCTCAACGTTTTCTTATAATTAATGATAGCTCCGCTCTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480367.1
CDS GCA 72 bp TTCATTTGGAAGCTATTCTACAAGAACTCCATGAGTTaGTTTTGGTCCTTCTGCCTAACGGAAAGAGAGCAA +
Preference number: 6 (lower is better)
Translates to: FIWKLFYKNSMS*FWSFCLTEREQ
Trigger: TTGCTCTCTTTCCGTTAGGCAGAAGGACCAAAAGCAACTCATGGAGTTCTTGTAGAATAGCTTCCAAATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462622.5
CDS CAA 72 bp TTCACTGAAGAGATCTTCTACAGTGACCTTCTTCTTTaGAGACAGACTATTATCTTCCGCTGGTGTCAGAAG +
Preference number: 6 (lower is better)
Translates to: FTEEIFYSDLLL*RQTIIFRWCQK
Trigger: CTTCTGACACCAGCGGAAGATAATAGTCTGTCTCAAAAGAAGAAGGTCACTGTAGAAGATCTCTTCAGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
ENST00000406326.5
ENST00000427557.1
ENST00000462622.5
ENST00000496611.1
ENST00000619756.4
CDS CAA 72 bp TTTCATTTGGAAGCTATTCTACAAGAACTCCATGAGTaGCTTTTGGTCCTTCTGCCTAACGGAAAGAGAGCA +
Preference number: 6 (lower is better)
Translates to: FHLEAILQELHE*LLVLLPNGKRA
Trigger: TGCTCTCTTTCCGTTAGGCAGAAGGACCAAAAGCAACTCATGGAGTTCTTGTAGAATAGCTTCCAAATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462622.5
CDS CAA 90 bp TTTGAAGTCTTCACTGAAGAGATCTTCTACAGTGACCTTCTTCTTTaGAGACAGACTATTATCTTCCGCTGGTGTCAGAAGTATGACCGA +
Preference number: 6 (lower is better)
Translates to: FEVFTEEIFYSDLLL*RQTIIFRWCQKYDR
Trigger: TCGGTCATACTTCTGACACCAGCGGAAGATAATAGTCTGTCTCAAAAGAAGAAGGTCACTGTAGAAGATCTCTTCAGTGAAGACTTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
ENST00000406326.5
ENST00000427557.1
ENST00000462622.5
ENST00000496611.1
ENST00000619756.4
CDS CCA 72 bp AGTCACATGATTTTGAATGAGGCAATGTCAACTTCCTaGACTTCACTTTCTTCATGGGTTCCACATTGTATG +
Preference number: 6 (lower is better)
Translates to: SHMILNEAMSTS*TSLSSWVPHCM
Trigger: CATACAATGTGGAACCCATGAAGAAAGTGAAGTCCAGGAAGTTGACATTGCCTCATTCAAAATCATGTGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406326.5
ENST00000619756.4
CDS CAA 72 bp TACAGGCTTGACTTACTGCTAATGAGTCACATGATTTaGAATGAGGCAATGTCAACTTCCTGGACTTCACTT +
Preference number: 6 (lower is better)
Translates to: YRLDLLLMSHMI*NEAMSTSWTSL
Trigger: AAGTGAAGTCCAGGAAGTTGACATTGCCTCATTCAAAATCATGTGACTCATTAGCAGTAAGTCAAGCCTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406326.5
ENST00000619756.4
CDS TCA 72 bp AATTCTGTATCACTTATCCACTTAGCCTCGGGGTCATaGATTTTGAAGTCTTCACTGAAGAGATCTTCTACA +
Preference number: 6 (lower is better)
Translates to: NSVSLIHLASGS*ILKSSLKRSST
Trigger: TGTAGAAGATCTCTTCAGTGAAGACTTCAAAATTCATGACCCCGAGGCTAAGTGGATAAGTGATACAGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5
ENST00000406326.5
ENST00000427557.1
ENST00000496611.1
ENST00000619756.4
CDS TCA 72 bp CCTGGACTTCACTTTCTTCATGGGTTCCACATTGTATaGAAAAAGTGCATACTCTCTATCTGGAGATATTTC +
Preference number: 6 (lower is better)
Translates to: PGLHFLHGFHIV*KKCILSIWRYF
Trigger: GAAATATCTCCAGATAGAGAGTATGCACTTTTTTCATACAATGTGGAACCCATGAAGAAAGTGAAGTCCAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406326.5
ENST00000619756.4
CDS TCA 72 bp AGTATACGAGTGTTGATATATGGGTTCCACATTGTATaGAAAAAGTGCATACTCTCTATCTGGAGATATTTC +
Preference number: 6 (lower is better)
Translates to: SIRVLIYGFHIV*KKCILSIWRYF
Trigger: GAAATATCTCCAGATAGAGAGTATGCACTTTTTTCATACAATGTGGAACCCATATATCAACACTCGTATACT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332007.7
ENST00000377770.8
ENST00000404039.5