RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DPP4 (Homo sapiens)

Ensembl gene IDs: ENSG00000197635

Ensembl transcript IDs: ENST00000360534.8, ENST00000413651.3, ENST00000416189.6, ENST00000434918.6, ENST00000461836.6, ENST00000491591.5, ENST00000494507.2, ENST00000497461.5, ENST00000676479.1, ENST00000676624.1, ENST00000676768.1, ENST00000676810.1, ENST00000676996.1, ENST00000677015.1, ENST00000677212.1, ENST00000678522.1, ENST00000678566.1, ENST00000678583.1, ENST00000678668.1, ENST00000678740.1, ENST00000679104.1

Found 1493 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTGAGGCTAGAAACTTCCGGAGAGCCCCGCTGCCAGCAACAGCCTaGCAAGGAGAAGTGGGAAGGATCGGTCCAGTGGCAGTGCCGACT +
Preference number: 1 (lower is better)
Translates to: PEARNFRRAPLPATA*QGEVGRIGPVAVPT
Trigger: AGTCGGCACTGCCACTGGACCGATCCTTCCCACTTCTCCTTGCCAGGCTGTTGCTGGCAGCGGGGCTCTCCGGAAGTTTCTAGCCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416189.6
3UTR GCA 90 bp GCAGTTGGCACTCTCCTGAGGCTAGAAACTTCCGGAGAGCCCCGCTaGCAGCAACAGCCTGGCAAGGAGAAGTGGGAAGGATCGGTCCAG +
Preference number: 1 (lower is better)
Translates to: AVGTLLRLETSGEPR*QQQPGKEKWEGSVQ
Trigger: CTGGACCGATCCTTCCCACTTCTCCTTGCCAGGCTGTTGCTGGCAGCGGGGCTCTCCGGAAGTTTCTAGCCTCAGGAGAGTGCCAACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416189.6
3UTR GCA 90 bp AGCTCTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGTTGGTATaGTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCTCCC +
Preference number: 1 (lower is better)
Translates to: SSSPRGADSSLLVLV*LDLGSQPCPAIFSP
Trigger: GGGAGAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR GCA 90 bp CAACAGCCTGGCAAGGAGAAGTGGGAAGGATCGGTCCAGTGGCAGTaGCGACTCCACAGCATCTCTGAGGAGCTTTTCCTTCAGTCCCCA +
Preference number: 1 (lower is better)
Translates to: QQPGKEKWEGSVQWQ*RLHSISEELFLQSP
Trigger: TGGGGACTGAAGGAAAAGCTCCTCAGAGATGCTGTGGAGTCGGCACTGCCACTGGACCGATCCTTCCCACTTCTCCTTGCCAGGCTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416189.6
3UTR TCA 90 bp CATAGTACTCCCACCGGGATACAGGCGCCACGGCTATTCCACACTTaGACACGCCACTTCCCGATCCCAGGACCATTGAGGTTACGTACC +
Preference number: 1 (lower is better)
Translates to: HSTPTGIQAPRLFHT*TRHFPIPGPLRLRT
Trigger: GGTACGTAACCTCAATGGTCCTGGGATCGGGAAGTGGCGTGTTCAAGTGTGGAATAGCCGTGGCGCCTGTATCCCGGTGGGAGTACTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR CCA 90 bp CTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTaGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCTCCCTAAT +
Preference number: 1 (lower is better)
Translates to: LLRGELTVACSCWYA*TWVPSHALLSSLPN
Trigger: ATTAGGGAGAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR CCA 90 bp GCTAGCACTTCCAGCTGCATCAATGTGGCACCAGAGACAATGCTCTaGCTTTGCCGTGGCATCCACACTAGCACATGGGGGCTGTCAATG +
Preference number: 1 (lower is better)
Translates to: ASTSSCINVAPETML*LCRGIHTSTWGLSM
Trigger: CATTGACAGCCCCCATGTGCTAGTGTGGATGCCACGGCAAAGCCAGAGCATTGTCTCTGGTGCCACATTGATGCAGCTGGAAGTGCTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494507.2
3UTR CCA 90 bp GAAACTCAGAGTGATAAATGGGCAAGGATGCAATGGTGGTGCAGTTaGCACTCTCCTGAGGCTAGAAACTTCCGGAGAGCCCCGCTGCCA +
Preference number: 1 (lower is better)
Translates to: ETQSDKWARMQWWCS*HSPEARNFRRAPLP
Trigger: TGGCAGCGGGGCTCTCCGGAAGTTTCTAGCCTCAGGAGAGTGCCAACTGCACCACCATTGCATCCTTGCCCATTTATCACTCTGAGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416189.6
3UTR GCA 90 bp CAAAGTGCCAGAAGGGTCCCTAGTACTTATGCTAGCACTTCCAGCTaGATCAATGTGGCACCAGAGACAATGCTCTGGCTTTGCCGTGGC +
Preference number: 1 (lower is better)
Translates to: QSARRVPSTYASTSS*INVAPETMLWLCRG
Trigger: GCCACGGCAAAGCCAGAGCATTGTCTCTGGTGCCACATTGATGCAGCTGGAAGTGCTAGCATAAGTACTAGGGACCCTTCTGGCACTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494507.2
3UTR GCA 90 bp ACTTCCAGCTGCATCAATGTGGCACCAGAGACAATGCTCTGGCTTTaGCGTGGCATCCACACTAGCACATGGGGGCTGTCAATGATAGTT +
Preference number: 1 (lower is better)
Translates to: TSSCINVAPETMLWL*RGIHTSTWGLSMIV
Trigger: AACTATCATTGACAGCCCCCATGTGCTAGTGTGGATGCCACGGCAAAGCCAGAGCATTGTCTCTGGTGCCACATTGATGCAGCTGGAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494507.2
3UTR CCA 90 bp GAAGGGTCCCTAGTACTTATGCTAGCACTTCCAGCTGCATCAATGTaGCACCAGAGACAATGCTCTGGCTTTGCCGTGGCATCCACACTA +
Preference number: 1 (lower is better)
Translates to: EGSLVLMLALPAASM*HQRQCSGFAVASTL
Trigger: TAGTGTGGATGCCACGGCAAAGCCAGAGCATTGTCTCTGGTGCCACATTGATGCAGCTGGAAGTGCTAGCATAAGTACTAGGGACCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494507.2
3UTR TCA 90 bp GACTGTTTGAATAGTCTTTCTCAGAAAACTGTGCCAGTCTGGCTGTaGACAGCTCTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGT +
Preference number: 1 (lower is better)
Translates to: DCLNSLSQKTVPVWL*TALLRGELTVACSC
Trigger: ACACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAGAGCTGTTCACAGCCAGACTGGCACAGTTTTCTGAGAAAGACTATTCAAACAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR GCA 90 bp AAAAAGGAAACTCAGAGTGATAAATGGGCAAGGATGCAATGGTGGTaGAGTTGGCACTCTCCTGAGGCTAGAAACTTCCGGAGAGCCCCG +
Preference number: 1 (lower is better)
Translates to: KKETQSDKWARMQWW*SWHSPEARNFRRAP
Trigger: CGGGGCTCTCCGGAAGTTTCTAGCCTCAGGAGAGTGCCAACTGCACCACCATTGCATCCTTGCCCATTTATCACTCTGAGTTTCCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416189.6
3UTR CCA 90 bp CACCCTTGCTGTGTTTTTGTAGCACCTATAGCCATAACTGGCACCTaGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGT +
Preference number: 1 (lower is better)
Translates to: HPCCVFVAPIAITGT*GPALLAVSLTFLWS
Trigger: ACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGTGCTACAAAAACACAGCAAGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR CCA 90 bp TTCCCATCACCCTTGCTGTGTTTTTGTAGCACCTATAGCCATAACTaGCACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCT +
Preference number: 1 (lower is better)
Translates to: FPSPLLCFCSTYSHN*HLGACVAGSFPYIS
Trigger: AGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGTGCTACAAAAACACAGCAAGGGTGATGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR CCA 90 bp CAGCCCACAGCCTTCCTGATGTACTTAATGCAACTCCAGAGAAAATaGATGCTTCCGTACTGCTGTGATGGTGCCTTCAGGAATCTGAGG +
Preference number: 1 (lower is better)
Translates to: QPTAFLMYLMQLQRK*MLPYCCDGAFRNLR
Trigger: CCTCAGATTCCTGAAGGCACCATCACAGCAGTACGGAAGCATCCATTTTCTCTGGAGTTGCATTAAGTACATCAGGAAGGCTGTGGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434918.6
ENST00000678566.1
3UTR CCA 90 bp CCAGAGACAATGCTCTGGCTTTGCCGTGGCATCCACACTAGCACATaGGGGCTGTCAATGATAGTTGCACCCACACCATATTTTAAATGC +
Preference number: 1 (lower is better)
Translates to: PETMLWLCRGIHTST*GLSMIVAPTPYFKC
Trigger: GCATTTAAAATATGGTGTGGGTGCAACTATCATTGACAGCCCCCATGTGCTAGTGTGGATGCCACGGCAAAGCCAGAGCATTGTCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494507.2
3UTR GCA 90 bp GTTCTGAATCCTCCTGAGCCACTGCAAAGAAATTCTTTCTTGTGTTaGCCATGTCACATCACACAAGTAGTGATCCCACGGAGCACAGCC +
Preference number: 1 (lower is better)
Translates to: VLNPPEPLQRNSFLC*PCHITQVVIPRSTA
Trigger: GGCTGTGCTCCGTGGGATCACTACTTGTGTGATGTGACATGGGCAACACAAGAAAGAATTTCTTTGCAGTGGCTCAGGAGGATTCAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434918.6
ENST00000678566.1
3UTR CCA 90 bp ACTAAAAAGGAAACTCAGAGTGATAAATGGGCAAGGATGCAATGGTaGTGCAGTTGGCACTCTCCTGAGGCTAGAAACTTCCGGAGAGCC +
Preference number: 1 (lower is better)
Translates to: TKKETQSDKWARMQW*CSWHSPEARNFRRA
Trigger: GGCTCTCCGGAAGTTTCTAGCCTCAGGAGAGTGCCAACTGCACCACCATTGCATCCTTGCCCATTTATCACTCTGAGTTTCCTTTTTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416189.6
3UTR TCA 90 bp TTTCCCCAGAAAAAGGCAGCTGTGTCACCTTGCCTCTGGAACCATTaGTCATTCCCTACTCAACTGTGCACCCTGGCTTCTCAATTAACA +
Preference number: 1 (lower is better)
Translates to: FPQKKAAVSPCLWNH*SFPTQLCTLASQLT
Trigger: TGTTAATTGAGAAGCCAGGGTGCACAGTTGAGTAGGGAATGATCAATGGTTCCAGAGGCAAGGTGACACAGCTGCCTTTTTCTGGGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416189.6
3UTR TCA 90 bp GTACTTAATGCAACTCCAGAGAAAATGGATGCTTCCGTACTGCTGTaGTGGTGCCTTCAGGAATCTGAGGGCACCAGCTGTAATCACACA +
Preference number: 1 (lower is better)
Translates to: VLNATPEKMDASVLL*WCLQESEGTSCNHT
Trigger: TGTGTGATTACAGCTGGTGCCCTCAGATTCCTGAAGGCACCATCACAGCAGTACGGAAGCATCCATTTTCTCTGGAGTTGCATTAAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434918.6
ENST00000678566.1
3UTR GCA 90 bp CTGATGTACTTAATGCAACTCCAGAGAAAATGGATGCTTCCGTACTaGTGTGATGGTGCCTTCAGGAATCTGAGGGCACCAGCTGTAATC +
Preference number: 1 (lower is better)
Translates to: LMYLMQLQRKWMLPY*CDGAFRNLRAPAVI
Trigger: GATTACAGCTGGTGCCCTCAGATTCCTGAAGGCACCATCACAGCAGTACGGAAGCATCCATTTTCTCTGGAGTTGCATTAAGTACATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434918.6
ENST00000678566.1
3UTR GCA 90 bp ACATGGGGGCTGTCAATGATAGTTGCACCCACACCATATTTTAAATaGTATAGCCCATCTGCAGAGCAACCTGCCCACTGGTTCTTCCAT +
Preference number: 1 (lower is better)
Translates to: TWGLSMIVAPTPYFK*YSPSAEQPAHWFFH
Trigger: ATGGAAGAACCAGTGGGCAGGTTGCTCTGCAGATGGGCTATAGCATTTAAAATATGGTGTGGGTGCAACTATCATTGACAGCCCCCATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494507.2
3UTR CCA 90 bp CAGAGCAACCTGCCCACTGGTTCTTCCATCAGGCAACCAGCCTGTTaGATGCTATTCAGTGATTTAGGTTTAGGGCTTTTTAAGGGTACT +
Preference number: 1 (lower is better)
Translates to: QSNLPTGSSIRQPAC*MLFSDLGLGLFKGT
Trigger: AGTACCCTTAAAAAGCCCTAAACCTAAATCACTGAATAGCATCCAACAGGCTGGTTGCCTGATGGAAGAACCAGTGGGCAGGTTGCTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494507.2
3UTR TCA 90 bp GACCAGGACCGGAACATCTCAGCTGATAATACTTCGCCTCTTTACTaGATGACACAGAATAGTACTGACACCTTTCCGGATTCAGCTCAC +
Preference number: 1 (lower is better)
Translates to: DQDRNISADNTSPLY*MTQNSTDTFPDSAH
Trigger: GTGAGCTGAATCCGGAAAGGTGTCAGTACTATTCTGTGTCATTCAGTAAAGAGGCGAAGTATTATCAGCTGAGATGTTCCGGTCCTGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR CCA 90 bp ACTACTAAAAAGGAAACTCAGAGTGATAAATGGGCAAGGATGCAATaGTGGTGCAGTTGGCACTCTCCTGAGGCTAGAAACTTCCGGAGA +
Preference number: 1 (lower is better)
Translates to: TTKKETQSDKWARMQ*WCSWHSPEARNFRR
Trigger: TCTCCGGAAGTTTCTAGCCTCAGGAGAGTGCCAACTGCACCACCATTGCATCCTTGCCCATTTATCACTCTGAGTTTCCTTTTTAGTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416189.6
3UTR TCA 90 bp TCCTGCCTTTGGATATGGAACCCGTACAGTCTTTGGGTACTGCAGTaGCTCATCAGAGTAGAAGGAGTATTCAATAAGTGGGACTTCTGT +
Preference number: 1 (lower is better)
Translates to: SCLWIWNPYSLWVLQ*LIRVEGVFNKWDFC
Trigger: ACAGAAGTCCCACTTATTGAATACTCCTTCTACTCTGATGAGTCACTGCAGTACCCAAAGACTGTACGGGTTCCATATCCAAAGGCAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR TCA 90 bp AGGACCGGAACATCTCAGCTGATAATACTTCGCCTCTTTACTGAATaGCACAGAATAGTACTGACACCTTTCCGGATTCAGCTCACAACT +
Preference number: 1 (lower is better)
Translates to: RTGTSQLIILRLFTE*HRIVLTPFRIQLTT
Trigger: AGTTGTGAGCTGAATCCGGAAAGGTGTCAGTACTATTCTGTGTCATTCAGTAAAGAGGCGAAGTATTATCAGCTGAGATGTTCCGGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR CCA 90 bp AGCCAGTTTTTCTCAGTATCAAGTAACTGTCCCACTCCTGTGCATTaGGCACCATTTGAACTGAGCACAGAGCAAATCATGTGTGTTAGA +
Preference number: 1 (lower is better)
Translates to: SQFFSVSSNCPTPVH*APFELSTEQIMCVR
Trigger: TCTAACACACATGATTTGCTCTGTGCTCAGTTCAAATGGTGCCCAATGCACAGGAGTGGGACAGTTACTTGATACTGAGAAAAACTGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676768.1
3UTR GCA 90 bp GTTCTGAATCCTCCTGAGCCACTGCAAAGAAATTCTTTCTTGTGTTaGCCATGTCACATCACACAAGTAGTGATCCCCTATCAACATAGA +
Preference number: 1 (lower is better)
Translates to: VLNPPEPLQRNSFLC*PCHITQVVIPYQHR
Trigger: TCTATGTTGATAGGGGATCACTACTTGTGTGATGTGACATGGGCAACACAAGAAAGAATTTCTTTGCAGTGGCTCAGGAGGATTCAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416189.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR GCA 90 bp ACCCAATCCATTTCCAAATTTGACTCAAAGGGCGCTTACACAGCATaGATGGGAAGGAATGATTATCCCATTAAGCCCACTTGTTTTAAT +
Preference number: 1 (lower is better)
Translates to: TQSISKFDSKGAYTA*MGRNDYPIKPTCFN
Trigger: ATTAAAACAAGTGGGCTTAATGGGATAATCATTCCTTCCCATGCATGCTGTGTAAGCGCCCTTTGAGTCAAATTTGGAAATGGATTGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676768.1
3UTR GCA 90 bp ACATTGTTTTATGAAGTGGCTCATGTGGGTATATATATGTTGGTGTaGTGTGCTGCTAGCTATTCCATGGTCTTCATCAGTATACCACAT +
Preference number: 1 (lower is better)
Translates to: TLFYEVAHVGIYMLV*CAASYSMVFISIPH
Trigger: ATGTGGTATACTGATGAAGACCATGGAATAGCTAGCAGCACAGCACACCAACATATATATACCCACATGAGCCACTTCATAAAACAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR CCA 90 bp GAGAAACATTGTTTTATGAAGTGGCTCATGTGGGTATATATATGTTaGTGTGCTGTGCTGCTAGCTATTCCATGGTCTTCATCAGTATAC +
Preference number: 1 (lower is better)
Translates to: EKHCFMKWLMWVYIC*CAVLLAIPWSSSVY
Trigger: GTATACTGATGAAGACCATGGAATAGCTAGCAGCACAGCACACCAACATATATATACCCACATGAGCCACTTCATAAAACAATGTTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR CCA 90 bp AATCCATTTCCAAATTTGACTCAAAGGGCGCTTACACAGCATGCATaGGAAGGAATGATTATCCCATTAAGCCCACTTGTTTTAATTAAA +
Preference number: 1 (lower is better)
Translates to: NPFPNLTQRALTQHA*EGMIIPLSPLVLIK
Trigger: TTTAATTAAAACAAGTGGGCTTAATGGGATAATCATTCCTTCCCATGCATGCTGTGTAAGCGCCCTTTGAGTCAAATTTGGAAATGGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676768.1
3UTR-3UTR CCA 90 bp CTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCGCCATAACTGGCACCTaGGGGCCTGCGTTGCTGGCA +
Preference number: 2 (lower is better)
Translates to: LTVACSCWYAWTWVPSHAAITGT*GPALLA
Trigger: TGCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGC...GGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp GCAGTTGGCACTCTCCTGAGGCTAGAAACTTCCGGAGAGCCCCGCTGCCAGCAACGGCTATTCCACACTTaGACACGCCACTTCCCGATC +
Preference number: 2 (lower is better)
Translates to: AVGTLLRLETSGEPRCQQRLFHT*TRHFPI
Trigger: GATCGGGAAGTGGCGTGTTCAAGTGTGGAATAGCCG...TTGCTGGCAGCGGGGCTCTCCGGAAGTTTCTAGCCTCAGGAGAGTGCCAACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416189.6
3UTR-3UTR TCA 90 bp TGTTTTTGTAGCACCTATAGCCATAACTGGCACCTGGGGGCCTGCGTTGCTGGCGTGCCAGTCTGGCTGTaGACAGCTCTTCTCCGAGGG +
Preference number: 2 (lower is better)
Translates to: CFCSTYSHNWHLGACVAGVPVWL*TALLRG
Trigger: CCCTCGGAGAAGAGCTGTTCACAGCCAGACTGGCAC...GCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGTGCTACAAAAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp CGGGATACAGGCGCCACGGCTATTCCACACTTGAACACGCCACTTCCCGATCCCGCTTCCGTACTGCTGTaGTGGTGCCTTCAGGAATCT +
Preference number: 2 (lower is better)
Translates to: RDTGATAIPHLNTPLPDPASVLL*WCLQES
Trigger: AGATTCCTGAAGGCACCATCACAGCAGTACGGAAGC...GGGATCGGGAAGTGGCGTGTTCAAGTGTGGAATAGCCGTGGCGCCTGTATCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434918.6
ENST00000678566.1
3UTR-3UTR GCA 90 bp GGCAGCTGTGTCACCTTGCCTCTGGAACCATTGATCATTCCCTACTCAACTGTGTCCGGAGAGCCCCGCTaGCAGCAACAGCCTGGCAAG +
Preference number: 2 (lower is better)
Translates to: GSCVTLPLEPLIIPYSTVSGEPR*QQQPGK
Trigger: CTTGCCAGGCTGTTGCTGGCAGCGGGGCTCTCCGGA...CACAGTTGAGTAGGGAATGATCAATGGTTCCAGAGGCAAGGTGACACAGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416189.6
3UTR-3UTR CCA 90 bp GCACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTGCCATAACTGGCACCTaGGGGCCTGCGTTGCTGGCA +
Preference number: 2 (lower is better)
Translates to: APGGLRCWQFPLHFFGVFAITGT*GPALLA
Trigger: TGCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGC...AAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp GTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCTCCCTAGCCATAACTGGCACCTaGGGGCCTGCGTTGCTGGCA +
Preference number: 2 (lower is better)
Translates to: VGMLGLGFPAMPCYLLSLAITGT*GPALLA
Trigger: TGCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGC...TAGGGAGAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR CAA 90 bp GTGAACAGCTCTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGTaGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTC +
Preference number: 2 (lower is better)
Translates to: VNSSSPRGADSSLLV*VCLDLGSQPCPAIF
Trigger: GAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAGAGCTGTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp GACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTCCACTGGTGACCATGTaGCCCACTGTGTGTTGTTTG +
Preference number: 2 (lower is better)
Translates to: DSSLLVLVCLDLGSQPCPPLVTM*PTVCCL
Trigger: CAAACAACACACAGTGGGTCACATGGTCACCAGTGG...AGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp CGGGATACAGGCGCCACGGCTATTCCACACTTGAACACGCCACTTCCCGATCCCACAGTGTCTGCTTTTTaGCTACATGGGCCTGCATAC +
Preference number: 2 (lower is better)
Translates to: RDTGATAIPHLNTPLPDPTVSAF*LHGPAY
Trigger: GTATGCAGGCCCATGTAGTCAAAAAGCAGACACTGT...GGGATCGGGAAGTGGCGTGTTCAAGTGTGGAATAGCCGTGGCGCCTGTATCCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp TTTGTAGCACCTATAGCCATAACTGGCACCTGGGGGCCTGCGTTGCTGGCAGTTTTGGGTTCCCAGCCATaGCCTGCTATCTTCTCTCCC +
Preference number: 2 (lower is better)
Translates to: FVAPIAITGTWGPALLAVLGSQP*PAIFSP
Trigger: GGGAGAGAAGATAGCAGGGCATGGCTGGGAACCCAA...AACTGCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGTGCTACAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp GAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATTTGGGTTCCCAGCCATaGCCTGCTATCTTCTCTCCC +
Preference number: 2 (lower is better)
Translates to: ELTVACSCWYAWTWVPSHLGSQP*PAIFSP
Trigger: GGGAGAGAAGATAGCAGGGCATGGCTGGGAACCCAA...ATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp TGTTTTTGTAGCACCTATAGCCATAACTGGCACCTGGGGGCCTGCGTTGCTGGCTGGTATGCTTGGACTTaGGTTCCCAGCCATGCCCTG +
Preference number: 2 (lower is better)
Translates to: CFCSTYSHNWHLGACVAGWYAWT*VPSHAL
Trigger: CAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCA...GCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGTGCTACAAAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp GCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCTGGTATGCTTGGACTTaGGTTCCCAGCCATGCCCTG +
Preference number: 2 (lower is better)
Translates to: ARVGMLGLGFPAMPCYLLWYAWT*VPSHAL
Trigger: CAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCA...GAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp ACACGCCACTTCCCGATCCCAGGACCATTGAGGTTACGTACCCTCCATATGACCACCTATAGCCATAACTaGCACCTGGGGGCCTGCGTT +
Preference number: 2 (lower is better)
Translates to: TRHFPIPGPLRLRTLHMTTYSHN*HLGACV
Trigger: AACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGT...GGTCATATGGAGGGTACGTAACCTCAATGGTCCTGGGATCGGGAAGTGGCGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp AACGTTCTGTGTACACTGAGTCATAGTACTCCCACCGGGATACAGGCGCCACGGGAGCTTCTATCCCGATaGCTTCCCAGGTGCCTTTTG +
Preference number: 2 (lower is better)
Translates to: NVLCTLSHSTPTGIQAPRELLSR*LPRCLL
Trigger: CAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTC...CCGTGGCGCCTGTATCCCGGTGGGAGTACTATGACTCAGTGTACACAGAACGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp GAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGAGCTTCTATCCCGATaGCTTCCCAGGTGCCTTTTG +
Preference number: 2 (lower is better)
Translates to: ELTVACSCWYAWTWVPSHELLSR*LPRCLL
Trigger: CAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTC...ATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp GGCACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTCGATCCCAGGACCATTaGGGTTACGTACCCTCCATA +
Preference number: 2 (lower is better)
Translates to: GTWGPALLAVSLTFLWSLRSQDH*GYVPSI
Trigger: TATGGAGGGTACGTAACCTCAATGGTCCTGGGATCG...AAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp GTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCTCCCTACGGCTATTCCACACTTaGACACGCCACTTCCCGATC +
Preference number: 2 (lower is better)
Translates to: VGMLGLGFPAMPCYLLSLRLFHT*TRHFPI
Trigger: GATCGGGAAGTGGCGTGTTCAAGTGTGGAATAGCCG...TAGGGAGAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp GCACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTCGGCTATTCCACACTTaGACACGCCACTTCCCGATC +
Preference number: 2 (lower is better)
Translates to: APGGLRCWQFPLHFFGVFRLFHT*TRHFPI
Trigger: GATCGGGAAGTGGCGTGTTCAAGTGTGGAATAGCCG...AAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp GGCACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTCTCTTATCCTGTCCCTaGCCTAGTGACATCACTGCC +
Preference number: 2 (lower is better)
Translates to: GTWGPALLAVSLTFLWSLLLSCP*PSDITA
Trigger: GGCAGTGATGTCACTAGGGCAGGGACAGGATAAGAG...AAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp GCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCGAGCTGACAGTAGCCTaGTCGTGTTGGTATGCTTGG +
Preference number: 2 (lower is better)
Translates to: ARVGMLGLGFPAMPCYLLELTVA*SCWYAW
Trigger: CCAAGCATACCAACACGAGCAGGCTACTGTCAGCTC...GAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp GCACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTCCACTGGTGACCATGTaGCCCACTGTGTGTTGTTTG +
Preference number: 2 (lower is better)
Translates to: APGGLRCWQFPLHFFGVFPLVTM*PTVCCL
Trigger: CAAACAACACACAGTGGGTCACATGGTCACCAGTGG...AAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp GTCATAGTACTCCCACCGGGATACAGGCGCCACGGCTATTCCACACTTGAACACTTTATGACCCACTGGTaGCCATGTGACCCACTGTGT +
Preference number: 2 (lower is better)
Translates to: VIVLPPGYRRHGYSTLEHFMTHW*PCDPLC
Trigger: ACACAGTGGGTCACATGGTCACCAGTGGGTCATAAA...GTGTTCAAGTGTGGAATAGCCGTGGCGCCTGTATCCCGGTGGGAGTACTATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416189.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp CTCTCAGCCCTTTATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGACCAGTTGGGTTCCCAGCCATaGCCTGCTATCTTCTCTCCC +
Preference number: 2 (lower is better)
Translates to: LSALYHSRCCVEYRGADQLGSQP*PAIFSP
Trigger: GGGAGAGAAGATAGCAGGGCATGGCTGGGAACCCAA...CTGGTCTGCCCCTCTATACTCTACACAGCAGCGTGAATGATAAAGGGCTGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp GCACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTCTGCTCGTGTTGGTATaGTTGGACTTGGGTTCCCAG +
Preference number: 2 (lower is better)
Translates to: APGGLRCWQFPLHFFGVFLLVLV*LDLGSQ
Trigger: CTGGGAACCCAAGTCCAAGCATACCAACACGAGCAG...AAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp GAGCCCCGCTGCCAGCAACAGCCTGGCAAGGAGAAGTGGGAAGGATCGGTCCAGATTGTTCCAAACATATaGCAATTTATGACCCACTGG +
Preference number: 2 (lower is better)
Translates to: EPRCQQQPGKEKWEGSVQIVPNI*QFMTHW
Trigger: CCAGTGGGTCATAAATTGGCATATGTTTGGAACAAT...CTGGACCGATCCTTCCCACTTCTCCTTGCCAGGCTGTTGCTGGCAGCGGGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416189.6
3UTR-3UTR GCA 90 bp CGGGATACAGGCGCCACGGCTATTCCACACTTGAACACGCCACTTCCCGATCCCCTTTATCATTCACGCTaGTGTGTAGAGTATAGAGGG +
Preference number: 2 (lower is better)
Translates to: RDTGATAIPHLNTPLPDPLYHSR*CVEYRG
Trigger: CCCTCTATACTCTACACAGCAGCGTGAATGATAAAG...GGGATCGGGAAGTGGCGTGTTCAAGTGTGGAATAGCCGTGGCGCCTGTATCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp GAGGGGCAGACCAGGACCGGAACATCTCAGCTGATAATACTTCGCCTCTTTACTACCTATAGCCATAACTaGCACCTGGGGGCCTGCGTT +
Preference number: 2 (lower is better)
Translates to: EGQTRTGTSQLIILRLFTTYSHN*HLGACV
Trigger: AACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGT...AGTAAAGAGGCGAAGTATTATCAGCTGAGATGTTCCGGTCCTGGTCTGCCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp GACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTAGTTCTGAATCCTCCTaGGCCACTGCAAAGAAATTC +
Preference number: 2 (lower is better)
Translates to: DSSLLVLVCLDLGSQPCPSSESS*ATAKKF
Trigger: GAATTTCTTTGCAGTGGCTCAGGAGGATTCAGAACT...AGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp GGCACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTACAGTGTCTGCTTTTTaGCTACATGGGCCTGCATAC +
Preference number: 2 (lower is better)
Translates to: GTWGPALLAVSLTFLWSLTVSAF*LHGPAY
Trigger: GTATGCAGGCCCATGTAGTCAAAAAGCAGACACTGT...AAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp CGGGATACAGGCGCCACGGCTATTCCACACTTGAACACGCCACTTCCCGATCCCCACAAATCCCATTTTTaGAAATTGTCTGGCTGCTTC +
Preference number: 2 (lower is better)
Translates to: RDTGATAIPHLNTPLPDPHKSHF*KLSGCF
Trigger: GAAGCAGCCAGACAATTTTCAAAAATGGGATTTGTG...GGGATCGGGAAGTGGCGTGTTCAAGTGTGGAATAGCCGTGGCGCCTGTATCCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp CTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGTCACTGCCCACATCTTaGCATCCCTTTAAAGAAGAG +
Preference number: 2 (lower is better)
Translates to: LLRGELTVACSCWYAWTWSLPTS*HPFKEE
Trigger: CTCTTCTTTAAAGGGATGGCAAGATGTGGGCAGTGA...CCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp ACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCCTGCTCGTGTTGGTATaGTTGGACTTGGGTTCCCAG +
Preference number: 2 (lower is better)
Translates to: TWGPALLAVSLTFLWSLFLLVLV*LDLGSQ
Trigger: CTGGGAACCCAAGTCCAAGCATACCAACACGAGCAG...GAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp CTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTTTCCCATCACCCTTaGTGTGTTTTTGTAGCACCT +
Preference number: 2 (lower is better)
Translates to: LTVACSCWYAWTWVPSHALSHHP*CVFVAP
Trigger: AGGTGCTACAAAAACACAGCAAGGGTGATGGGAAAG...GGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp AGCACTTCCAGCTGCATCAATGTGGCACCAGAGACAATGCTCTGGCTTTGCCGTATCTGCAGAGCAACCTaGCCACTGGTTCTTCCATCA +
Preference number: 2 (lower is better)
Translates to: STSSCINVAPETMLWLCRICRAT*PLVLPS
Trigger: TGATGGAAGAACCAGTGGGCAGGTTGCTCTGCAGAT...ACGGCAAAGCCAGAGCATTGTCTCTGGTGCCACATTGATGCAGCTGGAAGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494507.2
3UTR-3UTR CCA 90 bp GTCATAGTACTCCCACCGGGATACAGGCGCCACGGCTATTCCACACTTGAACACTCCTGCCTTTGGATATaGAACCCGTACAGTCTTTGG +
Preference number: 2 (lower is better)
Translates to: VIVLPPGYRRHGYSTLEHSCLWI*NPYSLW
Trigger: CCAAAGACTGTACGGGTTCCATATCCAAAGGCAGGA...GTGTTCAAGTGTGGAATAGCCGTGGCGCCTGTATCCCGGTGGGAGTACTATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp GGCACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTCCTGCCTTTGGATATaGAACCCGTACAGTCTTTGG +
Preference number: 2 (lower is better)
Translates to: GTWGPALLAVSLTFLWSLSCLWI*NPYSLW
Trigger: CCAAAGACTGTACGGGTTCCATATCCAAAGGCAGGA...AAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp AGTCTGGCTGTGAACAGCTCTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGGGTAATAATCTGTTGTaGAGACAGAAGTCCCTACTT +
Preference number: 2 (lower is better)
Translates to: SLAVNSSSPRGADSSLLVGNNLL*RQKSLL
Trigger: AAGTAGGGACTTCTGTCTTCACAACAGATTATTACC...CACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAGAGCTGTTCACAGCCAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp CTGCTAGCTATTCCATGGTCTTCATCAGTATACCACATTGCCTGGAAATCCACTGTGCCAGTCTGGCTGTaGACAGCTCTTCTCCGAGGG +
Preference number: 2 (lower is better)
Translates to: LLAIPWSSSVYHIAWKSTVPVWL*TALLRG
Trigger: CCCTCGGAGAAGAGCTGTTCACAGCCAGACTGGCAC...AGTGGATTTCCAGGCAATGTGGTATACTGATGAAGACCATGGAATAGCTAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp AACGTTCTGTGTACACTGAGTCATAGTACTCCCACCGGGATACAGGCGCCACGGACATATGCCAATTTATaGCCCACTGGTGACCATGTG +
Preference number: 2 (lower is better)
Translates to: NVLCTLSHSTPTGIQAPRTYANL*PTGDHV
Trigger: CACATGGTCACCAGTGGGTCATAAATTGGCATATGT...CCGTGGCGCCTGTATCCCGGTGGGAGTACTATGACTCAGTGTACACAGAACGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416189.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp GCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCACATATGCCAATTTATaGCCCACTGGTGACCATGTG +
Preference number: 2 (lower is better)
Translates to: ARVGMLGLGFPAMPCYLLTYANL*PTGDHV
Trigger: CACATGGTCACCAGTGGGTCATAAATTGGCATATGT...GAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp CTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTTTCCCCGTCCATGTaGTTCTGTAACTTGGTAAAT +
Preference number: 2 (lower is better)
Translates to: LTVACSCWYAWTWVPSHALSPSM*FCNLVN
Trigger: ATTTACCAAGTTACAGAATCACATGGACGGGGAAAG...GGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp GAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGAGCAGAGTAGGCACTaGAGACTTCCTCTTCATAAA +
Preference number: 2 (lower is better)
Translates to: ELTVACSCWYAWTWVPSHEQSRH*RLPLHK
Trigger: TTTATGAAGAGGAAGTCTTCAGTGCCTACTCTGCTC...ATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp GTCATAGTACTCCCACCGGGATACAGGCGCCACGGCTATTCCACACTTGAACACAGTTCTGAATCCTCCTaGGCCACTGCAAAGAAATTC +
Preference number: 2 (lower is better)
Translates to: VIVLPPGYRRHGYSTLEHSSESS*ATAKKF
Trigger: GAATTTCTTTGCAGTGGCTCAGGAGGATTCAGAACT...GTGTTCAAGTGTGGAATAGCCGTGGCGCCTGTATCCCGGTGGGAGTACTATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp CAGAGACAATGCTCTGGCTTTGCCGTGGCATCCACACTAGCACATGGGGGCTGTGATTCAGCTCACAACTaGGGCATGTCACTTTTGTAT +
Preference number: 2 (lower is better)
Translates to: QRQCSGFAVASTLAHGGCDSAHN*GMSLLY
Trigger: ATACAAAAGTGACATGCCTCAGTTGTGAGCTGAATC...ACAGCCCCCATGTGCTAGTGTGGATGCCACGGCAAAGCCAGAGCATTGTCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494507.2
3UTR-3UTR TCA 90 bp CTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCGATTCAGCTCACAACTaGGGCATGTCACTTTTGTAT +
Preference number: 2 (lower is better)
Translates to: LTVACSCWYAWTWVPSHADSAHN*GMSLLY
Trigger: ATACAAAAGTGACATGCCTCAGTTGTGAGCTGAATC...GGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp TGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACGCTTCCGTACTGCTGTaGTGGTGCCTTCAGGAATCT +
Preference number: 2 (lower is better)
Translates to: WGPALLAVSLTFLWSLFNASVLL*WCLQES
Trigger: AGATTCCTGAAGGCACCATCACAGCAGTACGGAAGC...GTTGAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678566.1
3UTR-3UTR GCA 90 bp GCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCTCACTGCCCACATCTTaGCATCCCTTTAAAGAAGAG +
Preference number: 2 (lower is better)
Translates to: ARVGMLGLGFPAMPCYLLSLPTS*HPFKEE
Trigger: CTCTTCTTTAAAGGGATGGCAAGATGTGGGCAGTGA...GAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp TGTTTTTGTAGCACCTATAGCCATAACTGGCACCTGGGGGCCTGCGTTGCTGGCTCACTGCCCACATCTTaGCATCCCTTTAAAGAAGAG +
Preference number: 2 (lower is better)
Translates to: CFCSTYSHNWHLGACVAGSLPTS*HPFKEE
Trigger: CTCTTCTTTAAAGGGATGGCAAGATGTGGGCAGTGA...GCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGTGCTACAAAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp TGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACCTCTTATCCTGTCCCTaGCCTAGTGACATCACTGCC +
Preference number: 2 (lower is better)
Translates to: WGPALLAVSLTFLWSLFNLLSCP*PSDITA
Trigger: GGCAGTGATGTCACTAGGGCAGGGACAGGATAAGAG...GTTGAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp CTCCTGCCTTTGGATATGGAACCCGTACAGTCTTTGGGTACTGCAGTGACTCATCTCTTATCCTGTCCCTaGCCTAGTGACATCACTGCC +
Preference number: 2 (lower is better)
Translates to: LLPLDMEPVQSLGTAVTHLLSCP*PSDITA
Trigger: GGCAGTGATGTCACTAGGGCAGGGACAGGATAAGAG...ATGAGTCACTGCAGTACCCAAAGACTGTACGGGTTCCATATCCAAAGGCAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp TGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACCTGCTCGTGTTGGTATaGTTGGACTTGGGTTCCCAG +
Preference number: 2 (lower is better)
Translates to: WGPALLAVSLTFLWSLFNLLVLV*LDLGSQ
Trigger: CTGGGAACCCAAGTCCAAGCATACCAACACGAGCAG...GTTGAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp TTTGTAGCACCTATAGCCATAACTGGCACCTGGGGGCCTGCGTTGCTGGCAGTTTTTCTCAGAAAACTGTaGCAGTCTGGCTGTGAACAG +
Preference number: 2 (lower is better)
Translates to: FVAPIAITGTWGPALLAVFLRKL*QSGCEQ
Trigger: CTGTTCACAGCCAGACTGGCACAGTTTTCTGAGAAA...AACTGCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGTGCTACAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp TGGAATGATCAAAGTGCCAGAAGGGTCCCTAGTACTTATGCTAGCACTTCCAGCTGGCACCAGAGACAATaGTCTGGCTTTGCCGTGGCA +
Preference number: 2 (lower is better)
Translates to: WNDQSARRVPSTYASTSSWHQRQ*SGFAVA
Trigger: TGCCACGGCAAAGCCAGAGCATTGTCTCTGGTGCCA...GCTGGAAGTGCTAGCATAAGTACTAGGGACCCTTCTGGCACTTTGATCATTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494507.2
3UTR-3UTR CCA 90 bp GTAGTGATCCCACGGAGCACAGCCCACAGCCTTCCTGATGTACTTAATGCAACTGTAGCCTGCTCGTGTTaGTATGCTTGGACTTGGGTT +
Preference number: 2 (lower is better)
Translates to: VVIPRSTAHSLPDVLNATVACSC*YAWTWV
Trigger: AACCCAAGTCCAAGCATACCAACACGAGCAGGCTAC...AGTTGCATTAAGTACATCAGGAAGGCTGTGGGCTGTGCTCCGTGGGATCACTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678566.1
3UTR-3UTR CCA 90 bp TTGAATTTCTGTAATGGTCAAGGTTGTCTTCTGGAGTTGGGAGACCCATGTAACGCCATAACTGGCACCTaGGGGCCTGCGTTGCTGGCA +
Preference number: 2 (lower is better)
Translates to: LNFCNGQGCLLELGDPCNAITGT*GPALLA
Trigger: TGCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGC...GTTACATGGGTCTCCCAACTCCAGAAGACAACCTTGACCATTACAGAAATTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp AGGACCATTGAGGTTACGTACCCTCCATATGACCAGCCCCAAATTGCAATTCGTACCTATAGCCATAACTaGCACCTGGGGGCCTGCGTT +
Preference number: 2 (lower is better)
Translates to: RTIEVTYPPYDQPQIAIRTYSHN*HLGACV
Trigger: AACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGT...ACGAATTGCAATTTGGGGCTGGTCATATGGAGGGTACGTAACCTCAATGGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp CGGGATACAGGCGCCACGGCTATTCCACACTTGAACACGCCACTTCCCGATCCCAGTTCCATCTTCCACTaGATTCATCATAGTCACAAA +
Preference number: 2 (lower is better)
Translates to: RDTGATAIPHLNTPLPDPSSIFH*IHHSHK
Trigger: TTTGTGACTATGATGAATCCAGTGGAAGATGGAACT...GGGATCGGGAAGTGGCGTGTTCAAGTGTGGAATAGCCGTGGCGCCTGTATCCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp CGGGATACAGGCGCCACGGCTATTCCACACTTGAACACGCCACTTCCCGATCCCAGTATAGATAATCACTaGTTAGAGCTTCTATCCCGA +
Preference number: 2 (lower is better)
Translates to: RDTGATAIPHLNTPLPDPSIDNH*LELLSR
Trigger: TCGGGATAGAAGCTCTAACCAGTGATTATCTATACT...GGGATCGGGAAGTGGCGTGTTCAAGTGTGGAATAGCCGTGGCGCCTGTATCCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp CCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTGTATACCACATTGCCTaGAAATCCACTCCAACATCG +
Preference number: 2 (lower is better)
Translates to: PARVGMLGLGFPAMPCYLVYHIA*KSTPTS
Trigger: CGATGTTGGAGTGGATTTCCAGGCAATGTGGTATAC...AAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp AGTCTGGCTGTGAACAGCTCTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGGAAGAGAACAACATTTaGACCAGTCCAGTTAGAAAA +
Preference number: 2 (lower is better)
Translates to: SLAVNSSSPRGADSSLLVEENNI*TSPVRK
Trigger: TTTTCTAACTGGACTGGTTCAAATGTTGTTCTCTTC...CACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAGAGCTGTTCACAGCCAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp ATGGAACCCGTACAGTCTTTGGGTACTGCAGTGACTCATCAGAGTAGAAGGAGTCCACTGGTGACCATGTaGCCCACTGTGTGTTGTTTG +
Preference number: 2 (lower is better)
Translates to: MEPVQSLGTAVTHQSRRSPLVTM*PTVCCL
Trigger: CAAACAACACACAGTGGGTCACATGGTCACCAGTGG...ACTCCTTCTACTCTGATGAGTCACTGCAGTACCCAAAGACTGTACGGGTTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416189.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp GCACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTGAGCAGAGTAGGCACTaGAGACTTCCTCTTCATAAA +
Preference number: 2 (lower is better)
Translates to: APGGLRCWQFPLHFFGVFEQSRH*RLPLHK
Trigger: TTTATGAAGAGGAAGTCTTCAGTGCCTACTCTGCTC...AAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp CCAGGACTCTCAGCCCTTTATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCACTTTGGGTACTGCAGTaGCTCATCAGAGTAGAAGGA +
Preference number: 2 (lower is better)
Translates to: PGLSALYHSRCCVEYRGALWVLQ*LIRVEG
Trigger: TCCTTCTACTCTGATGAGTCACTGCAGTACCCAAAG...TGCCCCTCTATACTCTACACAGCAGCGTGAATGATAAAGGGCTGAGAGTCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp AACGTTCTGTGTACACTGAGTCATAGTACTCCCACCGGGATACAGGCGCCACGGCCATCAAGGGTAAAATaGGGTTCTGAAGGCCTAAAT +
Preference number: 2 (lower is better)
Translates to: NVLCTLSHSTPTGIQAPRPSRVK*GSEGLN
Trigger: ATTTAGGCCTTCAGAACCTCATTTTACCCTTGATGG...CCGTGGCGCCTGTATCCCGGTGGGAGTACTATGACTCAGTGTACACAGAACGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp CCTCTGGAACCATTGATCATTCCCTACTCAACTGTGCACCCTGGCTTCTCAATTGAGCTTCTATCCCGATaGCTTCCCAGGTGCCTTTTG +
Preference number: 2 (lower is better)
Translates to: PLEPLIIPYSTVHPGFSIELLSR*LPRCLL
Trigger: CAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTC...AATTGAGAAGCCAGGGTGCACAGTTGAGTAGGGAATGATCAATGGTTCCAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416189.6
3UTR-3UTR TCA 90 bp AGGACCATTGAGGTTACGTACCCTCCATATGACCAGCCCCAAATTGCAATTCGTGAGCTTCTATCCCGATaGCTTCCCAGGTGCCTTTTG +
Preference number: 2 (lower is better)
Translates to: RTIEVTYPPYDQPQIAIRELLSR*LPRCLL
Trigger: CAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTC...ACGAATTGCAATTTGGGGCTGGTCATATGGAGGGTACGTAACCTCAATGGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp GCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCGATTCAGCTCACAACTaGGGCATGTCACTTTTGTAT +
Preference number: 2 (lower is better)
Translates to: ARVGMLGLGFPAMPCYLLDSAHN*GMSLLY
Trigger: ATACAAAAGTGACATGCCTCAGTTGTGAGCTGAATC...GAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp GTCATAGTACTCCCACCGGGATACAGGCGCCACGGCTATTCCACACTTGAACACCGCCTCTTTACTGAATaGCACAGAATAGTACTGACA +
Preference number: 2 (lower is better)
Translates to: VIVLPPGYRRHGYSTLEHRLFTE*HRIVLT
Trigger: TGTCAGTACTATTCTGTGTCATTCAGTAAAGAGGCG...GTGTTCAAGTGTGGAATAGCCGTGGCGCCTGTATCCCGGTGGGAGTACTATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp TGGAATGATCAAAGTGCCAGAAGGGTCCCTAGTACTTATGCTAGCACTTCCAGCCGATCCCAGGACCATTaGGGTTACGTACCCTCCATA +
Preference number: 2 (lower is better)
Translates to: WNDQSARRVPSTYASTSSRSQDH*GYVPSI
Trigger: TATGGAGGGTACGTAACCTCAATGGTCCTGGGATCG...GCTGGAAGTGCTAGCATAAGTACTAGGGACCCTTCTGGCACTTTGATCATTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494507.2
3UTR-3UTR GCA 90 bp ACACGCCACTTCCCGATCCCAGGACCATTGAGGTTACGTACCCTCCATATGACCCTTTATCATTCACGCTaGTGTGTAGAGTATAGAGGG +
Preference number: 2 (lower is better)
Translates to: TRHFPIPGPLRLRTLHMTLYHSR*CVEYRG
Trigger: CCCTCTATACTCTACACAGCAGCGTGAATGATAAAG...GGTCATATGGAGGGTACGTAACCTCAATGGTCCTGGGATCGGGAAGTGGCGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp GATCCCAGGACCATTGAGGTTACGTACCCTCCATATGACCAGCCCCAAATTGCATCCTGCCTTTGGATATaGAACCCGTACAGTCTTTGG +
Preference number: 2 (lower is better)
Translates to: DPRTIEVTYPPYDQPQIASCLWI*NPYSLW
Trigger: CCAAAGACTGTACGGGTTCCATATCCAAAGGCAGGA...TGCAATTTGGGGCTGGTCATATGGAGGGTACGTAACCTCAATGGTCCTGGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp CAGAGACAATGCTCTGGCTTTGCCGTGGCATCCACACTAGCACATGGGGGCTGTTTTTTGGAGGGCATCTaGACATTCTGCAGCATTTTA +
Preference number: 2 (lower is better)
Translates to: QRQCSGFAVASTLAHGGCFLEGI*TFCSIL
Trigger: TAAAATGCTGCAGAATGTCCAGATGCCCTCCAAAAA...ACAGCCCCCATGTGCTAGTGTGGATGCCACGGCAAAGCCAGAGCATTGTCTCTG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000494507.2
3UTR-3UTR CCA 90 bp GTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCTCCCTACAACTCCAGAGAAAATaGATGCTTCCGTACTGCTGT +
Preference number: 2 (lower is better)
Translates to: VGMLGLGFPAMPCYLLSLQLQRK*MLPYCC
Trigger: ACAGCAGTACGGAAGCATCCATTTTCTCTGGAGTTG...TAGGGAGAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678566.1
3UTR-3UTR TCA 90 bp GACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTAGATCATCATCATCTTaGCAGTGCAGTTTTGAGATA +
Preference number: 2 (lower is better)
Translates to: DSSLLVLVCLDLGSQPCPRSSSS*QCSFEI
Trigger: TATCTCAAAACTGCACTGTCAAGATGATGATGATCT...AGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp GAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGGTAATAATCTGTTGTaGAGACAGAAGTCCCTACTT +
Preference number: 2 (lower is better)
Translates to: ELTVACSCWYAWTWVPSHGNNLL*RQKSLL
Trigger: AAGTAGGGACTTCTGTCTTCACAACAGATTATTACC...ATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp CTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCGAAGAGAACAACATTTaGACCAGTCCAGTTAGAAAA +
Preference number: 2 (lower is better)
Translates to: LTVACSCWYAWTWVPSHAEENNI*TSPVRK
Trigger: TTTTCTAACTGGACTGGTTCAAATGTTGTTCTCTTC...GGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp AGCTCTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACGAAGAGAACAACATTTaGACCAGTCCAGTTAGAAAA +
Preference number: 2 (lower is better)
Translates to: SSSPRGADSSLLVLVCLDEENNI*TSPVRK
Trigger: TTTTCTAACTGGACTGGTTCAAATGTTGTTCTCTTC...GTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp ATTCCACACTTGAACACGCCACTTCCCGATCCCAGGACCATTGAGGTTACGTACGAGCAGAGTAGGCACTaGAGACTTCCTCTTCATAAA +
Preference number: 2 (lower is better)
Translates to: IPHLNTPLPDPRTIEVTYEQSRH*RLPLHK
Trigger: TTTATGAAGAGGAAGTCTTCAGTGCCTACTCTGCTC...GTACGTAACCTCAATGGTCCTGGGATCGGGAAGTGGCGTGTTCAAGTGTGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp CCCTACTCAACTGTGCACCCTGGCTTCTCAATTAACACCCTTTACAGTCCAGTGCTTTGGGTACTGCAGTaGCTCATCAGAGTAGAAGGA +
Preference number: 2 (lower is better)
Translates to: PYSTVHPGFSINTLYSPVLWVLQ*LIRVEG
Trigger: TCCTTCTACTCTGATGAGTCACTGCAGTACCCAAAG...CACTGGACTGTAAAGGGTGTTAATTGAGAAGCCAGGGTGCACAGTTGAGTAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416189.6
3UTR-3UTR TCA 90 bp GGCAGCTGTGTCACCTTGCCTCTGGAACCATTGATCATTCCCTACTCAACTGTGAGTTCTGAATCCTCCTaGGCCACTGCAAAGAAATTC +
Preference number: 2 (lower is better)
Translates to: GSCVTLPLEPLIIPYSTVSSESS*ATAKKF
Trigger: GAATTTCTTTGCAGTGGCTCAGGAGGATTCAGAACT...CACAGTTGAGTAGGGAATGATCAATGGTTCCAGAGGCAAGGTGACACAGCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416189.6
3UTR-3UTR TCA 90 bp GATCCCAGGACCATTGAGGTTACGTACCCTCCATATGACCAGCCCCAAATTGCAAGTTCTGAATCCTCCTaGGCCACTGCAAAGAAATTC +
Preference number: 2 (lower is better)
Translates to: DPRTIEVTYPPYDQPQIASSESS*ATAKKF
Trigger: GAATTTCTTTGCAGTGGCTCAGGAGGATTCAGAACT...TGCAATTTGGGGCTGGTCATATGGAGGGTACGTAACCTCAATGGTCCTGGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp ATTCCACACTTGAACACGCCACTTCCCGATCCCAGGACCATTGAGGTTACGTACAGTTCTGAATCCTCCTaGGCCACTGCAAAGAAATTC +
Preference number: 2 (lower is better)
Translates to: IPHLNTPLPDPRTIEVTYSSESS*ATAKKF
Trigger: GAATTTCTTTGCAGTGGCTCAGGAGGATTCAGAACT...GTACGTAACCTCAATGGTCCTGGGATCGGGAAGTGGCGTGTTCAAGTGTGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp GTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCTCCCTAGGTAAAATGAGGTTCTaGAGGCCTAAATCTTCCAAC +
Preference number: 2 (lower is better)
Translates to: VGMLGLGFPAMPCYLLSLGKMRF*RPKSSN
Trigger: GTTGGAAGATTTAGGCCTTCAGAACCTCATTTTACC...TAGGGAGAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp AACGTTCTGTGTACACTGAGTCATAGTACTCCCACCGGGATACAGGCGCCACGGACTTCGCCTCTTTACTaGATGACACAGAATAGTACT +
Preference number: 2 (lower is better)
Translates to: NVLCTLSHSTPTGIQAPRTSPLY*MTQNST
Trigger: AGTACTATTCTGTGTCATTCAGTAAAGAGGCGAAGT...CCGTGGCGCCTGTATCCCGGTGGGAGTACTATGACTCAGTGTACACAGAACGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp CTCTCAGCCCTTTATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGACCAGCTTTCCCATCACCCTTaGTGTGTTTTTGTAGCACCT +
Preference number: 2 (lower is better)
Translates to: LSALYHSRCCVEYRGADQLSHHP*CVFVAP
Trigger: AGGTGCTACAAAAACACAGCAAGGGTGATGGGAAAG...CTGGTCTGCCCCTCTATACTCTACACAGCAGCGTGAATGATAAAGGGCTGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp ACACGCCACTTCCCGATCCCAGGACCATTGAGGTTACGTACCCTCCATATGACCAAAGCACATTTACAATaGTTTCCCATCACCCTTGCT +
Preference number: 2 (lower is better)
Translates to: TRHFPIPGPLRLRTLHMTKAHLQ*FPITLA
Trigger: AGCAAGGGTGATGGGAAAGCATTGTAAATGTGCTTT...GGTCATATGGAGGGTACGTAACCTCAATGGTCCTGGGATCGGGAAGTGGCGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp GATCCCAGGACCATTGAGGTTACGTACCCTCCATATGACCAGCCCCAAATTGCATCTGAAGACAGTGTCTaGTTTTTGACTACATGGGCC +
Preference number: 2 (lower is better)
Translates to: DPRTIEVTYPPYDQPQIASEDSV*FLTTWA
Trigger: GGCCCATGTAGTCAAAAAGCAGACACTGTCTTCAGA...TGCAATTTGGGGCTGGTCATATGGAGGGTACGTAACCTCAATGGTCCTGGGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp CCCTACTCAACTGTGCACCCTGGCTTCTCAATTAACACCCTTTACAGTCCAGTGCTGCTCGTTGGATCATaGTGGTTCCTCAGTTACCTT +
Preference number: 2 (lower is better)
Translates to: PYSTVHPGFSINTLYSPVLLVGS*WFLSYL
Trigger: AAGGTAACTGAGGAACCAGCATGATCCAACGAGCAG...CACTGGACTGTAAAGGGTGTTAATTGAGAAGCCAGGGTGCACAGTTGAGTAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416189.6
3UTR-3UTR GCA 90 bp GTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCTCCCTAATCAGTATACCACATTaGCTGGAAATCCACTCCAAC +
Preference number: 2 (lower is better)
Translates to: VGMLGLGFPAMPCYLLSLISIPH*LEIHSN
Trigger: GTTGGAGTGGATTTCCAGGCAATGTGGTATACTGAT...TAGGGAGAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp CTGGTTAGAGCTTCTATCCCGATGACTTCCCAGGTGCCTTTTGTAATAAATGTGTGGTATGCTTGGACTTaGGTTCCCAGCCATGCCCTG +
Preference number: 2 (lower is better)
Translates to: LVRASIPMTSQVPFVINVWYAWT*VPSHAL
Trigger: CAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCA...CACATTTATTACAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTCTAACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp GTTAGAGCTTCTATCCCGATGACTTCCCAGGTGCCTTTTGTAATAAATGTGCAGTGGTATGCTTGGACTTaGGTTCCCAGCCATGCCCTG +
Preference number: 2 (lower is better)
Translates to: VRASIPMTSQVPFVINVQWYAWT*VPSHAL
Trigger: CAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCA...CTGCACATTTATTACAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTCTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp TGCCGTGGCATCCACACTAGCACATGGGGGCTGTCAATGATAGTTGCACCCACACCACTGTGTGTTGTTTaGAATCCTCTCTTCTGTAAT +
Preference number: 2 (lower is better)
Translates to: CRGIHTSTWGLSMIVAPTPLCVV*NPLFCN
Trigger: ATTACAGAAGAGAGGATTCCAAACAACACACAGTGG...TGTGGGTGCAACTATCATTGACAGCCCCCATGTGCTAGTGTGGATGCCACGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494507.2
3UTR-3UTR CCA 90 bp CTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGGAGTATTCAATAAGTaGGACTTCTGTGTCGTTAAA +
Preference number: 2 (lower is better)
Translates to: LLRGELTVACSCWYAWTWGVFNK*DFCVVK
Trigger: TTTAACGACACAGAAGTCCCACTTATTGAATACTCC...CCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp GAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATAAAGAACTTTACAGTTaGATTCACAGCTCCTGCCTT +
Preference number: 2 (lower is better)
Translates to: ELTVACSCWYAWTWVPSHKELYS*IHSSCL
Trigger: AAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTT...ATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp GTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCTCCCTACTGCTAGCTATTCCATaGTCTTCATCAGTATACCAC +
Preference number: 2 (lower is better)
Translates to: VGMLGLGFPAMPCYLLSLLLAIP*SSSVYH
Trigger: GTGGTATACTGATGAAGACCATGGAATAGCTAGCAG...TAGGGAGAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp CTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCATGAAGTGGCTCATGTaGGTATATATATGTTGGTGT +
Preference number: 2 (lower is better)
Translates to: LTVACSCWYAWTWVPSHAMKWLM*VYICWC
Trigger: ACACCAACATATATATACCCACATGAGCCACTTCAT...GGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp GGCACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTAGATCATCATCATCTTaGCAGTGCAGTTTTGAGATA +
Preference number: 2 (lower is better)
Translates to: GTWGPALLAVSLTFLWSLRSSSS*QCSFEI
Trigger: TATCTCAAAACTGCACTGTCAAGATGATGATGATCT...AAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp TGTTTTTGTAGCACCTATAGCCATAACTGGCACCTGGGGGCCTGCGTTGCTGGCGAAGAGAACAACATTTaGACCAGTCCAGTTAGAAAA +
Preference number: 2 (lower is better)
Translates to: CFCSTYSHNWHLGACVAGEENNI*TSPVRK
Trigger: TTTTCTAACTGGACTGGTTCAAATGTTGTTCTCTTC...GCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGTGCTACAAAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp ACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCTTTAACAGGGCAAGCTaGTGTGTTCACATCTCAGTT +
Preference number: 2 (lower is better)
Translates to: TWGPALLAVSLTFLWSLFFNRAS*CVHISV
Trigger: AACTGAGATGTGAACACATCAGCTTGCCCTGTTAAA...GAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp CTCTCAGCCCTTTATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGACCAGCTTTCCCCGTCCATGTaGTTCTGTAACTTGGTAAAT +
Preference number: 2 (lower is better)
Translates to: LSALYHSRCCVEYRGADQLSPSM*FCNLVN
Trigger: ATTTACCAAGTTACAGAATCACATGGACGGGGAAAG...CTGGTCTGCCCCTCTATACTCTACACAGCAGCGTGAATGATAAAGGGCTGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp TATAGAGGGGCAGACCAGGACCGGAACATCTCAGCTGATAATACTTCGCCTCTTAGTTCTGAATCCTCCTaGGCCACTGCAAAGAAATTC +
Preference number: 2 (lower is better)
Translates to: YRGADQDRNISADNTSPLSSESS*ATAKKF
Trigger: GAATTTCTTTGCAGTGGCTCAGGAGGATTCAGAACT...AAGAGGCGAAGTATTATCAGCTGAGATGTTCCGGTCCTGGTCTGCCCCTCTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp TATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGACCAGGACCGGAACATCCCATCAAGGGTAAAATaGGGTTCTGAAGGCCTAAAT +
Preference number: 2 (lower is better)
Translates to: YHSRCCVEYRGADQDRNIPSRVK*GSEGLN
Trigger: ATTTAGGCCTTCAGAACCTCATTTTACCCTTGATGG...GATGTTCCGGTCCTGGTCTGCCCCTCTATACTCTACACAGCAGCGTGAATGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp ATTCCACACTTGAACACGCCACTTCCCGATCCCAGGACCATTGAGGTTACGTACCCATCAAGGGTAAAATaGGGTTCTGAAGGCCTAAAT +
Preference number: 2 (lower is better)
Translates to: IPHLNTPLPDPRTIEVTYPSRVK*GSEGLN
Trigger: ATTTAGGCCTTCAGAACCTCATTTTACCCTTGATGG...GTACGTAACCTCAATGGTCCTGGGATCGGGAAGTGGCGTGTTCAAGTGTGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp TATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGACCAGGACCGGAACATCGATTCAGCTCACAACTaGGGCATGTCACTTTTGTAT +
Preference number: 2 (lower is better)
Translates to: YHSRCCVEYRGADQDRNIDSAHN*GMSLLY
Trigger: ATACAAAAGTGACATGCCTCAGTTGTGAGCTGAATC...GATGTTCCGGTCCTGGTCTGCCCCTCTATACTCTACACAGCAGCGTGAATGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp TATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGACCAGGACCGGAACATCCGCCTCTTTACTGAATaGCACAGAATAGTACTGACA +
Preference number: 2 (lower is better)
Translates to: YHSRCCVEYRGADQDRNIRLFTE*HRIVLT
Trigger: TGTCAGTACTATTCTGTGTCATTCAGTAAAGAGGCG...GATGTTCCGGTCCTGGTCTGCCCCTCTATACTCTACACAGCAGCGTGAATGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp TGGAATGATCAAAGTGCCAGAAGGGTCCCTAGTACTTATGCTAGCACTTCCAGCACAGTGTCTGCTTTTTaGCTACATGGGCCTGCATAC +
Preference number: 2 (lower is better)
Translates to: WNDQSARRVPSTYASTSSTVSAF*LHGPAY
Trigger: GTATGCAGGCCCATGTAGTCAAAAAGCAGACACTGT...GCTGGAAGTGCTAGCATAAGTACTAGGGACCCTTCTGGCACTTTGATCATTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494507.2
3UTR-3UTR TCA 90 bp CTGCTAGCTATTCCATGGTCTTCATCAGTATACCACATTGCCTGGAAATCCACTCGATCCCAGGACCATTaGGGTTACGTACCCTCCATA +
Preference number: 2 (lower is better)
Translates to: LLAIPWSSSVYHIAWKSTRSQDH*GYVPSI
Trigger: TATGGAGGGTACGTAACCTCAATGGTCCTGGGATCG...AGTGGATTTCCAGGCAATGTGGTATACTGATGAAGACCATGGAATAGCTAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp ACACGCCACTTCCCGATCCCAGGACCATTGAGGTTACGTACCCTCCATATGACCATCATAAATGTCATATaGAGCTGTGTAGGAATGCCT +
Preference number: 2 (lower is better)
Translates to: TRHFPIPGPLRLRTLHMTIINVI*SCVGMP
Trigger: AGGCATTCCTACACAGCTTCATATGACATTTATGAT...GGTCATATGGAGGGTACGTAACCTCAATGGTCCTGGGATCGGGAAGTGGCGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676479.1
ENST00000676624.1
3UTR-3UTR GCA 90 bp GTTAGAGCTTCTATCCCGATGACTTCCCAGGTGCCTTTTGTAATAAATGTGCAGCTCTTATCCTGTCCCTaGCCTAGTGACATCACTGCC +
Preference number: 2 (lower is better)
Translates to: VRASIPMTSQVPFVINVQLLSCP*PSDITA
Trigger: GGCAGTGATGTCACTAGGGCAGGGACAGGATAAGAG...CTGCACATTTATTACAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTCTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp CTGGTTAGAGCTTCTATCCCGATGACTTCCCAGGTGCCTTTTGTAATAAATGTGCTCTTATCCTGTCCCTaGCCTAGTGACATCACTGCC +
Preference number: 2 (lower is better)
Translates to: LVRASIPMTSQVPFVINVLLSCP*PSDITA
Trigger: GGCAGTGATGTCACTAGGGCAGGGACAGGATAAGAG...CACATTTATTACAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTCTAACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp CAGTGTCTGCTTTTTGACTACATGGGCCTGCATACACATCTAATAGTAGAGGATTTGGGTTCCCAGCCATaGCCTGCTATCTTCTCTCCC +
Preference number: 2 (lower is better)
Translates to: QCLLFDYMGLHTHLIVEDLGSQP*PAIFSP
Trigger: GGGAGAGAAGATAGCAGGGCATGGCTGGGAACCCAA...ATCCTCTACTATTAGATGTGTATGCAGGCCCATGTAGTCAAAAAGCAGACACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp GTTAGAGCTTCTATCCCGATGACTTCCCAGGTGCCTTTTGTAATAAATGTGCAGCTGCTCGTGTTGGTATaGTTGGACTTGGGTTCCCAG +
Preference number: 2 (lower is better)
Translates to: VRASIPMTSQVPFVINVQLLVLV*LDLGSQ
Trigger: CTGGGAACCCAAGTCCAAGCATACCAACACGAGCAG...CTGCACATTTATTACAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTCTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp ACACGCCACTTCCCGATCCCAGGACCATTGAGGTTACGTACCCTCCATATGACCATTGTTCCAAACATATaGCAATTTATGACCCACTGG +
Preference number: 2 (lower is better)
Translates to: TRHFPIPGPLRLRTLHMTIVPNI*QFMTHW
Trigger: CCAGTGGGTCATAAATTGGCATATGTTTGGAACAAT...GGTCATATGGAGGGTACGTAACCTCAATGGTCCTGGGATCGGGAAGTGGCGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416189.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp GTCATAGTACTCCCACCGGGATACAGGCGCCACGGCTATTCCACACTTGAACACAATTCTTTCTTGTGTTaGCCATGTCACATCACACAA +
Preference number: 2 (lower is better)
Translates to: VIVLPPGYRRHGYSTLEHNSFLC*PCHITQ
Trigger: TTGTGTGATGTGACATGGGCAACACAAGAAAGAATT...GTGTTCAAGTGTGGAATAGCCGTGGCGCCTGTATCCCGGTGGGAGTACTATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp TATAGAGGGGCAGACCAGGACCGGAACATCTCAGCTGATAATACTTCGCCTCTTTCTGAAGACAGTGTCTaGTTTTTGACTACATGGGCC +
Preference number: 2 (lower is better)
Translates to: YRGADQDRNISADNTSPLSEDSV*FLTTWA
Trigger: GGCCCATGTAGTCAAAAAGCAGACACTGTCTTCAGA...AAGAGGCGAAGTATTATCAGCTGAGATGTTCCGGTCCTGGTCTGCCCCTCTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp ACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCATCAGTATACCACATTaGCTGGAAATCCACTCCAAC +
Preference number: 2 (lower is better)
Translates to: TWGPALLAVSLTFLWSLFISIPH*LEIHSN
Trigger: GTTGGAGTGGATTTCCAGGCAATGTGGTATACTGAT...GAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp TTTCATCTTTTAACAGGGCAAGCTGATGTGTTCACATCTCAGTTTCAAGCTGCCTGGTATGCTTGGACTTaGGTTCCCAGCCATGCCCTG +
Preference number: 2 (lower is better)
Translates to: FHLLTGQADVFTSQFQAAWYAWT*VPSHAL
Trigger: CAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCA...GGCAGCTTGAAACTGAGATGTGAACACATCAGCTTGCCCTGTTAAAAGATGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp CTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCTCTTTTCAACTGCTGTaGTTTTACTTAGAAGTCAGT +
Preference number: 2 (lower is better)
Translates to: LTVACSCWYAWTWVPSHASFQLL*FYLEVS
Trigger: ACTGACTTCTAAGTAAAACCACAGCAGTTGAAAAGA...GGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp TTCTCAGAAAACTGTGCCAGTCTGGCTGTGAACAGCTCTTCTCCGAGGGGAGCTCCACTGTGTGTTGTTTaGAATCCTCTCTTCTGTAAT +
Preference number: 2 (lower is better)
Translates to: FSENCASLAVNSSSPRGAPLCVV*NPLFCN
Trigger: ATTACAGAAGAGAGGATTCCAAACAACACACAGTGG...AGCTCCCCTCGGAGAAGAGCTGTTCACAGCCAGACTGGCACAGTTTTCTGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp TGTCTTCCAGGACTCTCAGCCCTTTATCATTCACGCTGCTGTGTAGAGTATAGACACAGCTCCTGCCTTTaGATATGGAACCCGTACAGT +
Preference number: 2 (lower is better)
Translates to: CLPGLSALYHSRCCVEYRHSSCL*IWNPYS
Trigger: ACTGTACGGGTTCCATATCCAAAGGCAGGAGCTGTG...TCTATACTCTACACAGCAGCGTGAATGATAAAGGGCTGAGAGTCCTGGAAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp AACGTTCTGTGTACACTGAGTCATAGTACTCCCACCGGGATACAGGCGCCACGGAGTATAGATAATCACTaGTTAGAGCTTCTATCCCGA +
Preference number: 2 (lower is better)
Translates to: NVLCTLSHSTPTGIQAPRSIDNH*LELLSR
Trigger: TCGGGATAGAAGCTCTAACCAGTGATTATCTATACT...CCGTGGCGCCTGTATCCCGGTGGGAGTACTATGACTCAGTGTACACAGAACGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp GTGGGTATATATATGTTGGTGTGCTGTGCTGCTAGCTATTCCATGGTCTTCATCCATCGACCAGGGCTTTaGAGATCTGAGCTGACTGCT +
Preference number: 2 (lower is better)
Translates to: VGIYMLVCCAASYSMVFIHRPGL*RSELTA
Trigger: AGCAGTCAGCTCAGATCTCCAAAGCCCTGGTCGATG...GATGAAGACCATGGAATAGCTAGCAGCACAGCACACCAACATATATATACCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp ACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCCTGCTAGCTATTCCATaGTCTTCATCAGTATACCAC +
Preference number: 2 (lower is better)
Translates to: TWGPALLAVSLTFLWSLFLLAIP*SSSVYH
Trigger: GTGGTATACTGATGAAGACCATGGAATAGCTAGCAG...GAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR CAA 90 bp TTGGAGGGCATCTGGACATTCTGCAGCATTTTATCCAAAGCTGAATaGTCTTCCAGGACTCTCAGCCCTTTATCATTCACGCTGCTGTGT +
Preference number: 2 (lower is better)
Translates to: LEGIWTFCSILSKAE*SSRTLSPLSFTLLC
Trigger: ACACAGCAGCGTGAATGATAAAGGGCTGAGAGTCCTGGAAGACAATTCAGCTTTGGATAAAATGCTGCAGAATGTCCAGATGCCCTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR CAA 90 bp CGAATAGTTCTGAATCCTCCTGAGCCACTGCAAAGAAATTCTTTCTaGTGTTGCCCATGTCACATCACACAAGTAGTGATCCCACGGAGC +
Preference number: 2 (lower is better)
Translates to: RIVLNPPEPLQRNSF*CCPCHITQVVIPRS
Trigger: GCTCCGTGGGATCACTACTTGTGTGATGTGACATGGGCAACACAAGAAAGAATTTCTTTGCAGTGGCTCAGGAGGATTCAGAACTATTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434918.6
ENST00000678566.1
3UTR-3UTR TCA 90 bp TTCTCAGAAAACTGTGCCAGTCTGGCTGTGAACAGCTCTTCTCCGAGGGGAGCTAGATCATCATCATCTTaGCAGTGCAGTTTTGAGATA +
Preference number: 2 (lower is better)
Translates to: FSENCASLAVNSSSPRGARSSSS*QCSFEI
Trigger: TATCTCAAAACTGCACTGTCAAGATGATGATGATCT...AGCTCCCCTCGGAGAAGAGCTGTTCACAGCCAGACTGGCACAGTTTTCTGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp CTCTCAGCCCTTTATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGACCAGGGTAATAATCTGTTGTaGAGACAGAAGTCCCTACTT +
Preference number: 2 (lower is better)
Translates to: LSALYHSRCCVEYRGADQGNNLL*RQKSLL
Trigger: AAGTAGGGACTTCTGTCTTCACAACAGATTATTACC...CTGGTCTGCCCCTCTATACTCTACACAGCAGCGTGAATGATAAAGGGCTGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp CAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAGCTGATGCAGAAAGTGCCAGTCTGGCTGTaGACAGCTCTTCTCCGAGGG +
Preference number: 2 (lower is better)
Translates to: QSLHKNNSYLLFQQLMQKVPVWL*TALLRG
Trigger: CCCTCGGAGAAGAGCTGTTCACAGCCAGACTGGCAC...TTTCTGCATCAGCTGCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp TTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGAAAATTGTCTGGCTGCTTGTGCCAGTCTGGCTGTaGACAGCTCTTCTCCGAGGG +
Preference number: 2 (lower is better)
Translates to: LQFVCCPQIPFLKIVWLLVPVWL*TALLRG
Trigger: CCCTCGGAGAAGAGCTGTTCACAGCCAGACTGGCAC...AAGCAGCCAGACAATTTTCAAAAATGGGATTTGTGGACAACAAACGAATTGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp TATTTTCATCTTTTAACAGGGCAAGCTGATGTGTTCACATCTCAGTTTCAAGCTGTGCCAGTCTGGCTGTaGACAGCTCTTCTCCGAGGG +
Preference number: 2 (lower is better)
Translates to: YFHLLTGQADVFTSQFQAVPVWL*TALLRG
Trigger: CCCTCGGAGAAGAGCTGTTCACAGCCAGACTGGCAC...AGCTTGAAACTGAGATGTGAACACATCAGCTTGCCCTGTTAAAAGATGAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp GGAGACCCATGTAACGTTCTGTGTACACTGAGTCATAGTACTCCCACCGGGATATTTAACAGGGCAAGCTaGTGTGTTCACATCTCAGTT +
Preference number: 2 (lower is better)
Translates to: GDPCNVLCTLSHSTPTGIFNRAS*CVHISV
Trigger: AACTGAGATGTGAACACATCAGCTTGCCCTGTTAAA...TATCCCGGTGGGAGTACTATGACTCAGTGTACACAGAACGTTACATGGGTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp ATGGAACCCGTACAGTCTTTGGGTACTGCAGTGACTCATCAGAGTAGAAGGAGTACATATGCCAATTTATaGCCCACTGGTGACCATGTG +
Preference number: 2 (lower is better)
Translates to: MEPVQSLGTAVTHQSRRSTYANL*PTGDHV
Trigger: CACATGGTCACCAGTGGGTCATAAATTGGCATATGT...ACTCCTTCTACTCTGATGAGTCACTGCAGTACCCAAAGACTGTACGGGTTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416189.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp ATGGAACCCGTACAGTCTTTGGGTACTGCAGTGACTCATCAGAGTAGAAGGAGTGAGCAGAGTAGGCACTaGAGACTTCCTCTTCATAAA +
Preference number: 2 (lower is better)
Translates to: MEPVQSLGTAVTHQSRRSEQSRH*RLPLHK
Trigger: TTTATGAAGAGGAAGTCTTCAGTGCCTACTCTGCTC...ACTCCTTCTACTCTGATGAGTCACTGCAGTACCCAAAGACTGTACGGGTTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp TGTCTTCCAGGACTCTCAGCCCTTTATCATTCACGCTGCTGTGTAGAGTATAGACTTTGGGTACTGCAGTaGCTCATCAGAGTAGAAGGA +
Preference number: 2 (lower is better)
Translates to: CLPGLSALYHSRCCVEYRLWVLQ*LIRVEG
Trigger: TCCTTCTACTCTGATGAGTCACTGCAGTACCCAAAG...TCTATACTCTACACAGCAGCGTGAATGATAAAGGGCTGAGAGTCCTGGAAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp ACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAGTCACAAATATCCATaGCCGAATAGTTCTGAATCC +
Preference number: 2 (lower is better)
Translates to: TWGPALLAVSLTFLWSLFSHKYP*PNSSES
Trigger: GGATTCAGAACTATTCGGTCATGGATATTTGTGACT...GAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp TATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGACCAGGACCGGAACATCACTTCGCCTCTTTACTaGATGACACAGAATAGTACT +
Preference number: 2 (lower is better)
Translates to: YHSRCCVEYRGADQDRNITSPLY*MTQNST
Trigger: AGTACTATTCTGTGTCATTCAGTAAAGAGGCGAAGT...GATGTTCCGGTCCTGGTCTGCCCCTCTATACTCTACACAGCAGCGTGAATGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp ACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCCACAAATCCCATTTTTaGAAATTGTCTGGCTGCTTC +
Preference number: 2 (lower is better)
Translates to: TWGPALLAVSLTFLWSLFHKSHF*KLSGCF
Trigger: GAAGCAGCCAGACAATTTTCAAAAATGGGATTTGTG...GAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp ATTTACAATGCTTTCCCATCACCCTTGCTGTGTTTTTGTAGCACCTATAGCCATTTGGGTTCCCAGCCATaGCCTGCTATCTTCTCTCCC +
Preference number: 2 (lower is better)
Translates to: IYNAFPSPLLCFCSTYSHLGSQP*PAIFSP
Trigger: GGGAGAGAAGATAGCAGGGCATGGCTGGGAACCCAA...ATGGCTATAGGTGCTACAAAAACACAGCAAGGGTGATGGGAAAGCATTGTAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp GGTATATATATGTTGGTGTGCTGTGCTGCTAGCTATTCCATGGTCTTCATCAGTCTGCTCGTGTTGGTATaGTTGGACTTGGGTTCCCAG +
Preference number: 2 (lower is better)
Translates to: GIYMLVCCAASYSMVFISLLVLV*LDLGSQ
Trigger: CTGGGAACCCAAGTCCAAGCATACCAACACGAGCAG...ACTGATGAAGACCATGGAATAGCTAGCAGCACAGCACACCAACATATATATACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp AGGACCATTGAGGTTACGTACCCTCCATATGACCAGCCCCAAATTGCAATTCGTTTTCTCAGAAAACTGTaGCAGTCTGGCTGTGAACAG +
Preference number: 2 (lower is better)
Translates to: RTIEVTYPPYDQPQIAIRFLRKL*QSGCEQ
Trigger: CTGTTCACAGCCAGACTGGCACAGTTTTCTGAGAAA...ACGAATTGCAATTTGGGGCTGGTCATATGGAGGGTACGTAACCTCAATGGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp TATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGACCAGGACCGGAACATCAAAGCACATTTACAATaGTTTCCCATCACCCTTGCT +
Preference number: 2 (lower is better)
Translates to: YHSRCCVEYRGADQDRNIKAHLQ*FPITLA
Trigger: AGCAAGGGTGATGGGAAAGCATTGTAAATGTGCTTT...GATGTTCCGGTCCTGGTCTGCCCCTCTATACTCTACACAGCAGCGTGAATGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp CCAGGACTCTCAGCCCTTTATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAATCCTCCTGAGCCACTaGAAAGAAATTCTTTCTTGT +
Preference number: 2 (lower is better)
Translates to: PGLSALYHSRCCVEYRGAILLSH*KEILSC
Trigger: ACAAGAAAGAATTTCTTTGCAGTGGCTCAGGAGGAT...TGCCCCTCTATACTCTACACAGCAGCGTGAATGATAAAGGGCTGAGAGTCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp GGAGACCCATGTAACGTTCTGTGTACACTGAGTCATAGTACTCCCACCGGGATACTTTATCATTCACGCTaGTGTGTAGAGTATAGAGGG +
Preference number: 2 (lower is better)
Translates to: GDPCNVLCTLSHSTPTGILYHSR*CVEYRG
Trigger: CCCTCTATACTCTACACAGCAGCGTGAATGATAAAG...TATCCCGGTGGGAGTACTATGACTCAGTGTACACAGAACGTTACATGGGTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp CCTCTGGAACCATTGATCATTCCCTACTCAACTGTGCACCCTGGCTTCTCAATTTCTGAAGACAGTGTCTaGTTTTTGACTACATGGGCC +
Preference number: 2 (lower is better)
Translates to: PLEPLIIPYSTVHPGFSISEDSV*FLTTWA
Trigger: GGCCCATGTAGTCAAAAAGCAGACACTGTCTTCAGA...AATTGAGAAGCCAGGGTGCACAGTTGAGTAGGGAATGATCAATGGTTCCAGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416189.6
3UTR-3UTR GCA 90 bp GGCAGCTGTGTCACCTTGCCTCTGGAACCATTGATCATTCCCTACTCAACTGTGAGGATAATCCCTCTTTaGCTATCCATGGAAACAGAA +
Preference number: 2 (lower is better)
Translates to: GSCVTLPLEPLIIPYSTVRIIPL*LSMETE
Trigger: TTCTGTTTCCATGGATAGGCAAAGAGGGATTATCCT...CACAGTTGAGTAGGGAATGATCAATGGTTCCAGAGGCAAGGTGACACAGCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416189.6
3UTR-3UTR CCA 90 bp CTGCTAGCTATTCCATGGTCTTCATCAGTATACCACATTGCCTGGAAATCCACTGTAGCCTGCTCGTGTTaGTATGCTTGGACTTGGGTT +
Preference number: 2 (lower is better)
Translates to: LLAIPWSSSVYHIAWKSTVACSC*YAWTWV
Trigger: AACCCAAGTCCAAGCATACCAACACGAGCAGGCTAC...AGTGGATTTCCAGGCAATGTGGTATACTGATGAAGACCATGGAATAGCTAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp GCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCTCTTTTCAACTGCTGTaGTTTTACTTAGAAGTCAGT +
Preference number: 2 (lower is better)
Translates to: ARVGMLGLGFPAMPCYLLSFQLL*FYLEVS
Trigger: ACTGACTTCTAAGTAAAACCACAGCAGTTGAAAAGA...GAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp GGCAGCTGTGTCACCTTGCCTCTGGAACCATTGATCATTCCCTACTCAACTGTGCCACTGTGTGTTGTTTaGAATCCTCTCTTCTGTAAT +
Preference number: 2 (lower is better)
Translates to: GSCVTLPLEPLIIPYSTVPLCVV*NPLFCN
Trigger: ATTACAGAAGAGAGGATTCCAAACAACACACAGTGG...CACAGTTGAGTAGGGAATGATCAATGGTTCCAGAGGCAAGGTGACACAGCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416189.6
3UTR-3UTR CCA 90 bp ACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCCCACTGTGTGTTGTTTaGAATCCTCTCTTCTGTAAT +
Preference number: 2 (lower is better)
Translates to: TWGPALLAVSLTFLWSLFPLCVV*NPLFCN
Trigger: ATTACAGAAGAGAGGATTCCAAACAACACACAGTGG...GAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp CTCTCAGCCCTTTATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGACCAGAAAGAACTTTACAGTTaGATTCACAGCTCCTGCCTT +
Preference number: 2 (lower is better)
Translates to: LSALYHSRCCVEYRGADQKELYS*IHSSCL
Trigger: AAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTT...CTGGTCTGCCCCTCTATACTCTACACAGCAGCGTGAATGATAAAGGGCTGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp GATCCCAGGACCATTGAGGTTACGTACCCTCCATATGACCAGCCCCAAATTGCAAAAGAACTTTACAGTTaGATTCACAGCTCCTGCCTT +
Preference number: 2 (lower is better)
Translates to: DPRTIEVTYPPYDQPQIAKELYS*IHSSCL
Trigger: AAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTT...TGCAATTTGGGGCTGGTCATATGGAGGGTACGTAACCTCAATGGTCCTGGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp ATTCCACACTTGAACACGCCACTTCCCGATCCCAGGACCATTGAGGTTACGTACTTTTTGGAGGGCATCTaGACATTCTGCAGCATTTTA +
Preference number: 2 (lower is better)
Translates to: IPHLNTPLPDPRTIEVTYFLEGI*TFCSIL
Trigger: TAAAATGCTGCAGAATGTCCAGATGCCCTCCAAAAA...GTACGTAACCTCAATGGTCCTGGGATCGGGAAGTGGCGTGTTCAAGTGTGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR CAA 90 bp GGTCCTCATCTCTTACTCTGTAATGGTCAAGGTTGTCTTCTGGAGTaGGGAGACCCATGTAACGTTCTGTGTACACTGAGTCATAGTACT +
Preference number: 2 (lower is better)
Translates to: GPHLLLCNGQGCLLE*GDPCNVLCTLSHST
Trigger: AGTACTATGACTCAGTGTACACAGAACGTTACATGGGTCTCCCAACTCCAGAAGACAACCTTGACCATTACAGAGTAAGAGATGAGGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494507.2
3UTR-3UTR TCA 90 bp CATATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGCCACTGGTGACCATGTaGCCCACTGTGTGTTGTTTG +
Preference number: 2 (lower is better)
Translates to: HMTSPKLQFVCCPQIPFLPLVTM*PTVCCL
Trigger: CAAACAACACACAGTGGGTCACATGGTCACCAGTGG...CAAAAATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000416189.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp CTGGTTAGAGCTTCTATCCCGATGACTTCCCAGGTGCCTTTTGTAATAAATGTGCTTTGGGTACTGCAGTaGCTCATCAGAGTAGAAGGA +
Preference number: 2 (lower is better)
Translates to: LVRASIPMTSQVPFVINVLWVLQ*LIRVEG
Trigger: TCCTTCTACTCTGATGAGTCACTGCAGTACCCAAAG...CACATTTATTACAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTCTAACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp ATTCCACACTTGAACACGCCACTTCCCGATCCCAGGACCATTGAGGTTACGTACATCATAAATGTCATATaGAGCTGTGTAGGAATGCCT +
Preference number: 2 (lower is better)
Translates to: IPHLNTPLPDPRTIEVTYIINVI*SCVGMP
Trigger: AGGCATTCCTACACAGCTTCATATGACATTTATGAT...GTACGTAACCTCAATGGTCCTGGGATCGGGAAGTGGCGTGTTCAAGTGTGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676479.1
ENST00000676624.1
3UTR-3UTR GCA 90 bp AACTTCAAATGTTCCCAGTCTTCTGTTGATTGCATGCATGATCTTATCTCCTTGTTGGGTTCCCAGCCATaGCCTGCTATCTTCTCTCCC +
Preference number: 2 (lower is better)
Translates to: NFKCSQSSVDCMHDLISLLGSQP*PAIFSP
Trigger: GGGAGAGAAGATAGCAGGGCATGGCTGGGAACCCAA...CAAGGAGATAAGATCATGCATGCAATCAACAGAAGACTGGGAACATTTGAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp TTGAAAATTGTCTGGCTGCTTCAATTTGATCTTCAACTTCAAATGTTCCCAGTCCCTGGGGGCCTGCGTTaGTGGCAGTTTCCCTTACAT +
Preference number: 2 (lower is better)
Translates to: LKIVWLLQFDLQLQMFPVPGGLR*WQFPLH
Trigger: ATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGG...GACTGGGAACATTTGAAGTTGAAGATCAAATTGAAGCAGCCAGACAATTTTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp CTTGCCATCCCTTTAAAGAAGAGAACAACATTTGAACCAGTCCAGTTAGAAAAACCTGGGGGCCTGCGTTaGTGGCAGTTTCCCTTACAT +
Preference number: 2 (lower is better)
Translates to: LAIPLKKRTTFEPVQLEKPGGLR*WQFPLH
Trigger: ATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGG...TTTTTCTAACTGGACTGGTTCAAATGTTGTTCTCTTCTTTAAAGGGATGGCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp CTCTCAGCCCTTTATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGACCAGATTGTTCCAAACATATaGCAATTTATGACCCACTGG +
Preference number: 2 (lower is better)
Translates to: LSALYHSRCCVEYRGADQIVPNI*QFMTHW
Trigger: CCAGTGGGTCATAAATTGGCATATGTTTGGAACAAT...CTGGTCTGCCCCTCTATACTCTACACAGCAGCGTGAATGATAAAGGGCTGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416189.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp GGAGACCCATGTAACGTTCTGTGTACACTGAGTCATAGTACTCCCACCGGGATACTTCTGTTGATTGCATaGATGATCTTATCTCCTTGG +
Preference number: 2 (lower is better)
Translates to: GDPCNVLCTLSHSTPTGILLLIA*MILSPW
Trigger: CCAAGGAGATAAGATCATGCATGCAATCAACAGAAG...TATCCCGGTGGGAGTACTATGACTCAGTGTACACAGAACGTTACATGGGTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp CAGGAGAGCAGTGTCTTGATACTCCCAGCATATGCGATATTGTGCTTCTTAACCTTGAGCATTACTCTGTaGATGGCTGAAGGATACCAC +
Preference number: 2 (lower is better)
Translates to: QESSVLILPAYAILCFLTLSITL*MAEGYH
Trigger: GTGGTATCCTTCAGCCATGCACAGAGTAATGCTCAA...GGTTAAGAAGCACAATATCGCATATGCTGGGAGTATCAAGACACTGCTCTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676768.1
3UTR-3UTR CCA 90 bp CCAGGACTCTCAGCCCTTTATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGGAGTATTCAATAAGTaGGACTTCTGTGTCGTTAAA +
Preference number: 2 (lower is better)
Translates to: PGLSALYHSRCCVEYRGAGVFNK*DFCVVK
Trigger: TTTAACGACACAGAAGTCCCACTTATTGAATACTCC...TGCCCCTCTATACTCTACACAGCAGCGTGAATGATAAAGGGCTGAGAGTCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp GGTATATATATGTTGGTGTGCTGTGCTGCTAGCTATTCCATGGTCTTCATCAGTCACAGCTCCTGCCTTTaGATATGGAACCCGTACAGT +
Preference number: 2 (lower is better)
Translates to: GIYMLVCCAASYSMVFISHSSCL*IWNPYS
Trigger: ACTGTACGGGTTCCATATCCAAAGGCAGGAGCTGTG...ACTGATGAAGACCATGGAATAGCTAGCAGCACAGCACACCAACATATATATACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp TATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGACCAGGACCGGAACATCAGTTCCATCTTCCACTaGATTCATCATAGTCACAAA +
Preference number: 2 (lower is better)
Translates to: YHSRCCVEYRGADQDRNISSIFH*IHHSHK
Trigger: TTTGTGACTATGATGAATCCAGTGGAAGATGGAACT...GATGTTCCGGTCCTGGTCTGCCCCTCTATACTCTACACAGCAGCGTGAATGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp GATCCCAGGACCATTGAGGTTACGTACCCTCCATATGACCAGCCCCAAATTGCAAGTTCCATCTTCCACTaGATTCATCATAGTCACAAA +
Preference number: 2 (lower is better)
Translates to: DPRTIEVTYPPYDQPQIASSIFH*IHHSHK
Trigger: TTTGTGACTATGATGAATCCAGTGGAAGATGGAACT...TGCAATTTGGGGCTGGTCATATGGAGGGTACGTAACCTCAATGGTCCTGGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp TATAGAGGGGCAGACCAGGACCGGAACATCTCAGCTGATAATACTTCGCCTCTTAGATCATCATCATCTTaGCAGTGCAGTTTTGAGATA +
Preference number: 2 (lower is better)
Translates to: YRGADQDRNISADNTSPLRSSSS*QCSFEI
Trigger: TATCTCAAAACTGCACTGTCAAGATGATGATGATCT...AAGAGGCGAAGTATTATCAGCTGAGATGTTCCGGTCCTGGTCTGCCCCTCTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp CTCCTGCCTTTGGATATGGAACCCGTACAGTCTTTGGGTACTGCAGTGACTCATGAAGAGAACAACATTTaGACCAGTCCAGTTAGAAAA +
Preference number: 2 (lower is better)
Translates to: LLPLDMEPVQSLGTAVTHEENNI*TSPVRK
Trigger: TTTTCTAACTGGACTGGTTCAAATGTTGTTCTCTTC...ATGAGTCACTGCAGTACCCAAAGACTGTACGGGTTCCATATCCAAAGGCAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp TATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGAACCACTGGTGACCATGTaGCCCACTGTGTGTTGTTTG +
Preference number: 2 (lower is better)
Translates to: YDQPQIAIRLLSTNPIFEPLVTM*PTVCCL
Trigger: CAAACAACACACAGTGGGTCACATGGTCACCAGTGG...TTCAAAAATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000416189.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp TTGCACCCACACCATATTTTAAATGCTATAGCCCATCTGCAGAGCAACCTGCCCACTTCGCCTCTTTACTaGATGACACAGAATAGTACT +
Preference number: 2 (lower is better)
Translates to: LHPHHILNAIAHLQSNLPTSPLY*MTQNST
Trigger: AGTACTATTCTGTGTCATTCAGTAAAGAGGCGAAGT...GGGCAGGTTGCTCTGCAGATGGGCTATAGCATTTAAAATATGGTGTGGGTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494507.2
3UTR-3UTR TCA 90 bp CCTCTGGAACCATTGATCATTCCCTACTCAACTGTGCACCCTGGCTTCTCAATTCACAAATCCCATTTTTaGAAATTGTCTGGCTGCTTC +
Preference number: 2 (lower is better)
Translates to: PLEPLIIPYSTVHPGFSIHKSHF*KLSGCF
Trigger: GAAGCAGCCAGACAATTTTCAAAAATGGGATTTGTG...AATTGAGAAGCCAGGGTGCACAGTTGAGTAGGGAATGATCAATGGTTCCAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416189.6
3UTR-3UTR GCA 90 bp CTGGTTAGAGCTTCTATCCCGATGACTTCCCAGGTGCCTTTTGTAATAAATGTGTCACTGCCCACATCTTaGCATCCCTTTAAAGAAGAG +
Preference number: 2 (lower is better)
Translates to: LVRASIPMTSQVPFVINVSLPTS*HPFKEE
Trigger: CTCTTCTTTAAAGGGATGGCAAGATGTGGGCAGTGA...CACATTTATTACAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTCTAACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp AACTTCAAATGTTCCCAGTCTTCTGTTGATTGCATGCATGATCTTATCTCCTTGCTGCTCGTGTTGGTATaGTTGGACTTGGGTTCCCAG +
Preference number: 2 (lower is better)
Translates to: NFKCSQSSVDCMHDLISLLLVLV*LDLGSQ
Trigger: CTGGGAACCCAAGTCCAAGCATACCAACACGAGCAG...CAAGGAGATAAGATCATGCATGCAATCAACAGAAGACTGGGAACATTTGAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp GGCAGCTGTGTCACCTTGCCTCTGGAACCATTGATCATTCCCTACTCAACTGTGTCTAAGAGAATAAACTaGCCATCAGGAGATATTGAA +
Preference number: 2 (lower is better)
Translates to: GSCVTLPLEPLIIPYSTVSKRIN*PSGDIE
Trigger: TTCAATATCTCCTGATGGGCAGTTTATTCTCTTAGA...CACAGTTGAGTAGGGAATGATCAATGGTTCCAGAGGCAAGGTGACACAGCTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416189.6
3UTR-3UTR GCA 90 bp TGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACATTGTTCCAAACATATaGCAATTTATGACCCACTGG +
Preference number: 2 (lower is better)
Translates to: WGPALLAVSLTFLWSLFNIVPNI*QFMTHW
Trigger: CCAGTGGGTCATAAATTGGCATATGTTTGGAACAAT...GTTGAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp CTTGCCATCCCTTTAAAGAAGAGAACAACATTTGAACCAGTCCAGTTAGAAAAAACCTATAGCCATAACTaGCACCTGGGGGCCTGCGTT +
Preference number: 2 (lower is better)
Translates to: LAIPLKKRTTFEPVQLEKTYSHN*HLGACV
Trigger: AACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGT...TTTTTCTAACTGGACTGGTTCAAATGTTGTTCTCTTCTTTAAAGGGATGGCAAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp TATTTTCATCTTTTAACAGGGCAAGCTGATGTGTTCACATCTCAGTTTCAAGCTACCTATAGCCATAACTaGCACCTGGGGGCCTGCGTT +
Preference number: 2 (lower is better)
Translates to: YFHLLTGQADVFTSQFQATYSHN*HLGACV
Trigger: AACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGT...AGCTTGAAACTGAGATGTGAACACATCAGCTTGCCCTGTTAAAAGATGAAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp TTGAATTTCTGTAATGGTCAAGGTTGTCTTCTGGAGTTGGGAGACCCATGTAACTCCTGCCTTTGGATATaGAACCCGTACAGTCTTTGG +
Preference number: 2 (lower is better)
Translates to: LNFCNGQGCLLELGDPCNSCLWI*NPYSLW
Trigger: CCAAAGACTGTACGGGTTCCATATCCAAAGGCAGGA...GTTACATGGGTCTCCCAACTCCAGAAGACAACCTTGACCATTACAGAAATTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp AATATCCATGACCGAATAGTTCTGAATCCTCCTGAGCCACTGCAAAGAAATTCTCACAGCTCCTGCCTTTaGATATGGAACCCGTACAGT +
Preference number: 2 (lower is better)
Translates to: NIHDRIVLNPPEPLQRNSHSSCL*IWNPYS
Trigger: ACTGTACGGGTTCCATATCCAAAGGCAGGAGCTGTG...AGAATTTCTTTGCAGTGGCTCAGGAGGATTCAGAACTATTCGGTCATGGATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp TGGAATGATCAAAGTGCCAGAAGGGTCCCTAGTACTTATGCTAGCACTTCCAGCAGTAAGGGAAGCTATTaGAGTATCTCTAAACCACCT +
Preference number: 2 (lower is better)
Translates to: WNDQSARRVPSTYASTSSSKGSY*SISKPP
Trigger: AGGTGGTTTAGAGATACTCCAATAGCTTCCCTTACT...GCTGGAAGTGCTAGCATAAGTACTAGGGACCCTTCTGGCACTTTGATCATTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494507.2
3UTR-3UTR CCA 90 bp CAATCACATGAACAGGAGAGCAGTGTCTTGATACTCCCAGCATATGCGATATTGGCATTACTCTGTGCATaGCTGAAGGATACCACTCTT +
Preference number: 2 (lower is better)
Translates to: QSHEQESSVLILPAYAILALLCA*LKDTTL
Trigger: AAGAGTGGTATCCTTCAGCCATGCACAGAGTAATGC...CAATATCGCATATGCTGGGAGTATCAAGACACTGCTCTCCTGTTCATGTGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676768.1
3UTR CAA 90 bp CGAATAGTTCTGAATCCTCCTGAGCCACTGCAAAGAAATTCTTTCTaGTGTTGCCCATGTCACATCACACAAGTAGTGATCCCCTATCAA +
Preference number: 2 (lower is better)
Translates to: RIVLNPPEPLQRNSF*CCPCHITQVVIPYQ
Trigger: TTGATAGGGGATCACTACTTGTGTGATGTGACATGGGCAACACAAGAAAGAATTTCTTTGCAGTGGCTCAGGAGGATTCAGAACTATTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416189.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp TTACAACAAAGAACTTTACAGTTGGATTCACAGCTCCTGCCTTTGGATATGGAATTTATGACCCACTGGTaGCCATGTGACCCACTGTGT +
Preference number: 2 (lower is better)
Translates to: LQQRTLQLDSQLLPLDMEFMTHW*PCDPLC
Trigger: ACACAGTGGGTCACATGGTCACCAGTGGGTCATAAA...TTCCATATCCAAAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTTGTTGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416189.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp CTGGTTAGAGCTTCTATCCCGATGACTTCCCAGGTGCCTTTTGTAATAAATGTGCTTTCCCCGTCCATGTaGTTCTGTAACTTGGTAAAT +
Preference number: 2 (lower is better)
Translates to: LVRASIPMTSQVPFVINVLSPSM*FCNLVN
Trigger: ATTTACCAAGTTACAGAATCACATGGACGGGGAAAG...CACATTTATTACAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTCTAACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp TGTCTTCCAGGACTCTCAGCCCTTTATCATTCACGCTGCTGTGTAGAGTATAGAAGTCACAAATATCCATaGCCGAATAGTTCTGAATCC +
Preference number: 2 (lower is better)
Translates to: CLPGLSALYHSRCCVEYRSHKYP*PNSSES
Trigger: GGATTCAGAACTATTCGGTCATGGATATTTGTGACT...TCTATACTCTACACAGCAGCGTGAATGATAAAGGGCTGAGAGTCCTGGAAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp CTGGTTAGAGCTTCTATCCCGATGACTTCCCAGGTGCCTTTTGTAATAAATGTGGGTAAAATGAGGTTCTaGAGGCCTAAATCTTCCAAC +
Preference number: 2 (lower is better)
Translates to: LVRASIPMTSQVPFVINVGKMRF*RPKSSN
Trigger: GTTGGAAGATTTAGGCCTTCAGAACCTCATTTTACC...CACATTTATTACAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTCTAACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp CTGGTTAGAGCTTCTATCCCGATGACTTCCCAGGTGCCTTTTGTAATAAATGTGCCATCAAGGGTAAAATaGGGTTCTGAAGGCCTAAAT +
Preference number: 2 (lower is better)
Translates to: LVRASIPMTSQVPFVINVPSRVK*GSEGLN
Trigger: ATTTAGGCCTTCAGAACCTCATTTTACCCTTGATGG...CACATTTATTACAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTCTAACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp TCAGGGAATCTATGCAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCGAGCTTCTATCCCGATaGCTTCCCAGGTGCCTTTTG +
Preference number: 2 (lower is better)
Translates to: SGNLCKASIKTIPICCFSELLSR*LPRCLL
Trigger: CAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTC...GCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTGCATAGATTCCCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp TTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGAAAATTGTCTGGCTGCTTGAGCTTCTATCCCGATaGCTTCCCAGGTGCCTTTTG +
Preference number: 2 (lower is better)
Translates to: LQFVCCPQIPFLKIVWLLELLSR*LPRCLL
Trigger: CAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTC...AAGCAGCCAGACAATTTTCAAAAATGGGATTTGTGGACAACAAACGAATTGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp TTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGAAAATTGTCTGGCTGCTTCTCTTATCCTGTCCCTaGCCTAGTGACATCACTGCC +
Preference number: 2 (lower is better)
Translates to: LQFVCCPQIPFLKIVWLLLLSCP*PSDITA
Trigger: GGCAGTGATGTCACTAGGGCAGGGACAGGATAAGAG...AAGCAGCCAGACAATTTTCAAAAATGGGATTTGTGGACAACAAACGAATTGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp CAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAGCTGATGCAGAAACTCTTATCCTGTCCCTaGCCTAGTGACATCACTGCC +
Preference number: 2 (lower is better)
Translates to: QSLHKNNSYLLFQQLMQKLLSCP*PSDITA
Trigger: GGCAGTGATGTCACTAGGGCAGGGACAGGATAAGAG...TTTCTGCATCAGCTGCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp CAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAGCTGATGCAGAAAGAGCTGACAGTAGCCTaGTCGTGTTGGTATGCTTGG +
Preference number: 2 (lower is better)
Translates to: QSLHKNNSYLLFQQLMQKELTVA*SCWYAW
Trigger: CCAAGCATACCAACACGAGCAGGCTACTGTCAGCTC...TTTCTGCATCAGCTGCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp CTTGCCATCCCTTTAAAGAAGAGAACAACATTTGAACCAGTCCAGTTAGAAAAAGAGCTGACAGTAGCCTaGTCGTGTTGGTATGCTTGG +
Preference number: 2 (lower is better)
Translates to: LAIPLKKRTTFEPVQLEKELTVA*SCWYAW
Trigger: CCAAGCATACCAACACGAGCAGGCTACTGTCAGCTC...TTTTTCTAACTGGACTGGTTCAAATGTTGTTCTCTTCTTTAAAGGGATGGCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp AGGACCATTGAGGTTACGTACCCTCCATATGACCAGCCCCAAATTGCAATTCGTAATTCTTTCTTGTGTTaGCCATGTCACATCACACAA +
Preference number: 2 (lower is better)
Translates to: RTIEVTYPPYDQPQIAIRNSFLC*PCHITQ
Trigger: TTGTGTGATGTGACATGGGCAACACAAGAAAGAATT...ACGAATTGCAATTTGGGGCTGGTCATATGGAGGGTACGTAACCTCAATGGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp TCACTGGTTAGAGCTTCTATCCCGATGACTTCCCAGGTGCCTTTTGTAATAAATCTCATTTCAATGTGTTaGCGTGCCACTAAGCAGTTC +
Preference number: 2 (lower is better)
Translates to: SLVRASIPMTSQVPFVINLISMC*RATKQF
Trigger: GAACTGCTTAGTGGCACGGCAACACATTGAAATGAG...ATTTATTACAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTCTAACCAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp CAGTGTCTGCTTTTTGACTACATGGGCCTGCATACACATCTAATAGTAGAGGATCTCATTTCAATGTGTTaGCGTGCCACTAAGCAGTTC +
Preference number: 2 (lower is better)
Translates to: QCLLFDYMGLHTHLIVEDLISMC*RATKQF
Trigger: GAACTGCTTAGTGGCACGGCAACACATTGAAATGAG...ATCCTCTACTATTAGATGTGTATGCAGGCCCATGTAGTCAAAAAGCAGACACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp TTGAATTTCTGTAATGGTCAAGGTTGTCTTCTGGAGTTGGGAGACCCATGTAACCTCATTTCAATGTGTTaGCGTGCCACTAAGCAGTTC +
Preference number: 2 (lower is better)
Translates to: LNFCNGQGCLLELGDPCNLISMC*RATKQF
Trigger: GAACTGCTTAGTGGCACGGCAACACATTGAAATGAG...GTTACATGGGTCTCCCAACTCCAGAAGACAACCTTGACCATTACAGAAATTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp CTGCTAGCTATTCCATGGTCTTCATCAGTATACCACATTGCCTGGAAATCCACTAATGTTTTCTGTGCTTaGAAGGTAAGTGGCCCAGTT +
Preference number: 2 (lower is better)
Translates to: LLAIPWSSSVYHIAWKSTNVFCA*KVSGPV
Trigger: AACTGGGCCACTTACCTTGCAAGCACAGAAAACATT...AGTGGATTTCCAGGCAATGTGGTATACTGATGAAGACCATGGAATAGCTAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp TTTGGAATGATCAAAGTGCCAGAAGGGTCCCTAGTACTTATGCTAGCACTTCCAAATGTTTTCTGTGCTTaGAAGGTAAGTGGCCCAGTT +
Preference number: 2 (lower is better)
Translates to: FGMIKVPEGSLVLMLALPNVFCA*KVSGPV
Trigger: AACTGGGCCACTTACCTTGCAAGCACAGAAAACATT...TGGAAGTGCTAGCATAAGTACTAGGGACCCTTCTGGCACTTTGATCATTCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494507.2
3UTR-3UTR CCA 90 bp GGAGACCCATGTAACGTTCTGTGTACACTGAGTCATAGTACTCCCACCGGGATATCTTTTCAACTGCTGTaGTTTTACTTAGAAGTCAGT +
Preference number: 2 (lower is better)
Translates to: GDPCNVLCTLSHSTPTGISFQLL*FYLEVS
Trigger: ACTGACTTCTAAGTAAAACCACAGCAGTTGAAAAGA...TATCCCGGTGGGAGTACTATGACTCAGTGTACACAGAACGTTACATGGGTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp AACTTCAAATGTTCCCAGTCTTCTGTTGATTGCATGCATGATCTTATCTCCTTGCACAGCTCCTGCCTTTaGATATGGAACCCGTACAGT +
Preference number: 2 (lower is better)
Translates to: NFKCSQSSVDCMHDLISLHSSCL*IWNPYS
Trigger: ACTGTACGGGTTCCATATCCAAAGGCAGGAGCTGTG...CAAGGAGATAAGATCATGCATGCAATCAACAGAAGACTGGGAACATTTGAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp TCTTACTCTGTAATGGTCAAGGTTGTCTTCTGGAGTTGGGAGACCCATGTAACGAAAGAACTTTACAGTTaGATTCACAGCTCCTGCCTT +
Preference number: 2 (lower is better)
Translates to: SYSVMVKVVFWSWETHVTKELYS*IHSSCL
Trigger: AAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTT...CGTTACATGGGTCTCCCAACTCCAGAAGACAACCTTGACCATTACAGAGTAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494507.2
3UTR-3UTR CCA 90 bp ATTTACAATGCTTTCCCATCACCCTTGCTGTGTTTTTGTAGCACCTATAGCCATGTTGTCTTCTGGAGTTaGGAGACCCATGTAACGTTC +
Preference number: 2 (lower is better)
Translates to: IYNAFPSPLLCFCSTYSHVVFWS*ETHVTF
Trigger: GAACGTTACATGGGTCTCCCAACTCCAGAAGACAAC...ATGGCTATAGGTGCTACAAAAACACAGCAAGGGTGATGGGAAAGCATTGTAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR CAA 90 bp GCATATGCGATATTGTGCTTCTTAACCCCAAACTCGCTAATATTATaGAGCATTACTCTGTGCATGGCTGAAGGATACCACTCTTCTGAC +
Preference number: 2 (lower is better)
Translates to: AYAILCFLTPNSLIL*SITLCMAEGYHSSD
Trigger: GTCAGAAGAGTGGTATCCTTCAGCCATGCACAGAGTAATGCTCAATAATATTAGCGAGTTTGGGGTTAAGAAGCACAATATCGCATATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676768.1
3UTR-3UTR TCA 90 bp CAGTGTCTGCTTTTTGACTACATGGGCCTGCATACACATCTAATAGTAGAGGATTTTAACAGGGCAAGCTaGTGTGTTCACATCTCAGTT +
Preference number: 2 (lower is better)
Translates to: QCLLFDYMGLHTHLIVEDFNRAS*CVHISV
Trigger: AACTGAGATGTGAACACATCAGCTTGCCCTGTTAAA...ATCCTCTACTATTAGATGTGTATGCAGGCCCATGTAGTCAAAAAGCAGACACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp TTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGAAAATTGTCTGGCTGCTTTTTATGACCCACTGGTaGCCATGTGACCCACTGTGT +
Preference number: 2 (lower is better)
Translates to: LQFVCCPQIPFLKIVWLLFMTHW*PCDPLC
Trigger: ACACAGTGGGTCACATGGTCACCAGTGGGTCATAAA...AAGCAGCCAGACAATTTTCAAAAATGGGATTTGTGGACAACAAACGAATTGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000416189.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp TCACTGGTTAGAGCTTCTATCCCGATGACTTCCCAGGTGCCTTTTGTAATAAATCTTTCCCCGTCCATGTaGTTCTGTAACTTGGTAAAT +
Preference number: 2 (lower is better)
Translates to: SLVRASIPMTSQVPFVINLSPSM*FCNLVN
Trigger: ATTTACCAAGTTACAGAATCACATGGACGGGGAAAG...ATTTATTACAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTCTAACCAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp GTGGGTATATATATGTTGGTGTGCTGTGCTGCTAGCTATTCCATGGTCTTCATCAGTCACAAATATCCATaGCCGAATAGTTCTGAATCC +
Preference number: 2 (lower is better)
Translates to: VGIYMLVCCAASYSMVFISHKYP*PNSSES
Trigger: GGATTCAGAACTATTCGGTCATGGATATTTGTGACT...GATGAAGACCATGGAATAGCTAGCAGCACAGCACACCAACATATATATACCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp CAGTGTCTGCTTTTTGACTACATGGGCCTGCATACACATCTAATAGTAGAGGATCCATCAAGGGTAAAATaGGGTTCTGAAGGCCTAAAT +
Preference number: 2 (lower is better)
Translates to: QCLLFDYMGLHTHLIVEDPSRVK*GSEGLN
Trigger: ATTTAGGCCTTCAGAACCTCATTTTACCCTTGATGG...ATCCTCTACTATTAGATGTGTATGCAGGCCCATGTAGTCAAAAAGCAGACACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp TTGAATTTCTGTAATGGTCAAGGTTGTCTTCTGGAGTTGGGAGACCCATGTAACCGCCTCTTTACTGAATaGCACAGAATAGTACTGACA +
Preference number: 2 (lower is better)
Translates to: LNFCNGQGCLLELGDPCNRLFTE*HRIVLT
Trigger: TGTCAGTACTATTCTGTGTCATTCAGTAAAGAGGCG...GTTACATGGGTCTCCCAACTCCAGAAGACAACCTTGACCATTACAGAAATTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp AATATCCATGACCGAATAGTTCTGAATCCTCCTGAGCCACTGCAAAGAAATTCTTTTCTCAGAAAACTGTaGCAGTCTGGCTGTGAACAG +
Preference number: 2 (lower is better)
Translates to: NIHDRIVLNPPEPLQRNSFLRKL*QSGCEQ
Trigger: CTGTTCACAGCCAGACTGGCACAGTTTTCTGAGAAA...AGAATTTCTTTGCAGTGGCTCAGGAGGATTCAGAACTATTCGGTCATGGATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp CATATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGCTTTCCCATCACCCTTaGTGTGTTTTTGTAGCACCT +
Preference number: 2 (lower is better)
Translates to: HMTSPKLQFVCCPQIPFLLSHHP*CVFVAP
Trigger: AGGTGCTACAAAAACACAGCAAGGGTGATGGGAAAG...CAAAAATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp ATGGAACCCGTACAGTCTTTGGGTACTGCAGTGACTCATCAGAGTAGAAGGAGTTCTAAGAGAATAAACTaGCCATCAGGAGATATTGAA +
Preference number: 2 (lower is better)
Translates to: MEPVQSLGTAVTHQSRRSSKRIN*PSGDIE
Trigger: TTCAATATCTCCTGATGGGCAGTTTATTCTCTTAGA...ACTCCTTCTACTCTGATGAGTCACTGCAGTACCCAAAGACTGTACGGGTTCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416189.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp TATTTTCATCTTTTAACAGGGCAAGCTGATGTGTTCACATCTCAGTTTCAAGCTGTAGCCTGCTCGTGTTaGTATGCTTGGACTTGGGTT +
Preference number: 2 (lower is better)
Translates to: YFHLLTGQADVFTSQFQAVACSC*YAWTWV
Trigger: AACCCAAGTCCAAGCATACCAACACGAGCAGGCTAC...AGCTTGAAACTGAGATGTGAACACATCAGCTTGCCCTGTTAAAAGATGAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp CTTGCCATCCCTTTAAAGAAGAGAACAACATTTGAACCAGTCCAGTTAGAAAAAGTAGCCTGCTCGTGTTaGTATGCTTGGACTTGGGTT +
Preference number: 2 (lower is better)
Translates to: LAIPLKKRTTFEPVQLEKVACSC*YAWTWV
Trigger: AACCCAAGTCCAAGCATACCAACACGAGCAGGCTAC...TTTTTCTAACTGGACTGGTTCAAATGTTGTTCTCTTCTTTAAAGGGATGGCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp TATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGAATCCTGCCTTTGGATATaGAACCCGTACAGTCTTTGG +
Preference number: 2 (lower is better)
Translates to: YDQPQIAIRLLSTNPIFESCLWI*NPYSLW
Trigger: CCAAAGACTGTACGGGTTCCATATCCAAAGGCAGGA...TTCAAAAATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp TCAGGGAATCTATGCAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCCACAGCTCCTGCCTTTaGATATGGAACCCGTACAGT +
Preference number: 2 (lower is better)
Translates to: SGNLCKASIKTIPICCFSHSSCL*IWNPYS
Trigger: ACTGTACGGGTTCCATATCCAAAGGCAGGAGCTGTG...GCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTGCATAGATTCCCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR CAA 90 bp CTTCCAACAAATAAATTCTGTAATGGTCAAGGTTGTCTTCTGGAGTaGGGAGACCCATGTAACGTTCTGTGTACACTGAGTCATAGTACT +
Preference number: 2 (lower is better)
Translates to: LPTNKFCNGQGCLLE*GDPCNVLCTLSHST
Trigger: AGTACTATGACTCAGTGTACACAGAACGTTACATGGGTCTCCCAACTCCAGAAGACAACCTTGACCATTACAGAATTTATTTGTTGGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416189.6
3UTR-3UTR TCA 90 bp TTGAATTTCTGTAATGGTCAAGGTTGTCTTCTGGAGTTGGGAGACCCATGTAACGGTAATAATCTGTTGTaGAGACAGAAGTCCCTACTT +
Preference number: 2 (lower is better)
Translates to: LNFCNGQGCLLELGDPCNGNNLL*RQKSLL
Trigger: AAGTAGGGACTTCTGTCTTCACAACAGATTATTACC...GTTACATGGGTCTCCCAACTCCAGAAGACAACCTTGACCATTACAGAAATTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp CTTGCCATCCCTTTAAAGAAGAGAACAACATTTGAACCAGTCCAGTTAGAAAAACTTTGGGTACTGCAGTaGCTCATCAGAGTAGAAGGA +
Preference number: 2 (lower is better)
Translates to: LAIPLKKRTTFEPVQLEKLWVLQ*LIRVEG
Trigger: TCCTTCTACTCTGATGAGTCACTGCAGTACCCAAAG...TTTTTCTAACTGGACTGGTTCAAATGTTGTTCTCTTCTTTAAAGGGATGGCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp ATTTACAATGCTTTCCCATCACCCTTGCTGTGTTTTTGTAGCACCTATAGCCATGGTAAAATGAGGTTCTaGAGGCCTAAATCTTCCAAC +
Preference number: 2 (lower is better)
Translates to: IYNAFPSPLLCFCSTYSHGKMRF*RPKSSN
Trigger: GTTGGAAGATTTAGGCCTTCAGAACCTCATTTTACC...ATGGCTATAGGTGCTACAAAAACACAGCAAGGGTGATGGGAAAGCATTGTAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp CATATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGGATTCAGCTCACAACTaGGGCATGTCACTTTTGTAT +
Preference number: 2 (lower is better)
Translates to: HMTSPKLQFVCCPQIPFLDSAHN*GMSLLY
Trigger: ATACAAAAGTGACATGCCTCAGTTGTGAGCTGAATC...CAAAAATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp TATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGAATCACTGCCCACATCTTaGCATCCCTTTAAAGAAGAG +
Preference number: 2 (lower is better)
Translates to: YDQPQIAIRLLSTNPIFESLPTS*HPFKEE
Trigger: CTCTTCTTTAAAGGGATGGCAAGATGTGGGCAGTGA...TTCAAAAATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp ATTTACAATGCTTTCCCATCACCCTTGCTGTGTTTTTGTAGCACCTATAGCCATCTTTATCATTCACGCTaGTGTGTAGAGTATAGAGGG +
Preference number: 2 (lower is better)
Translates to: IYNAFPSPLLCFCSTYSHLYHSR*CVEYRG
Trigger: CCCTCTATACTCTACACAGCAGCGTGAATGATAAAG...ATGGCTATAGGTGCTACAAAAACACAGCAAGGGTGATGGGAAAGCATTGTAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp AGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACTGCTGTGGTTTTACTTAGAACACAGCTCCTGCCTTTaGATATGGAACCCGTACAGT +
Preference number: 2 (lower is better)
Translates to: SFPYISLESFQLLWFYLEHSSCL*IWNPYS
Trigger: ACTGTACGGGTTCCATATCCAAAGGCAGGAGCTGTG...TTCTAAGTAAAACCACAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp CCTCCATATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTAGTTCCATCTTCCACTaGATTCATCATAGTCACAAA +
Preference number: 2 (lower is better)
Translates to: PPYDQPQIAIRLLSTNPISSIFH*IHHSHK
Trigger: TTTGTGACTATGATGAATCCAGTGGAAGATGGAACT...AATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATATGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR CAA 90 bp CCTATCAACATAGAAGCAGGAGCAGTGATTTGTATGGAAGTTGCATaGGTGACTGAGCTGAGAGAGTCTGTATTTACAACAAAGAACTTT +
Preference number: 2 (lower is better)
Translates to: PINIEAGAVICMEVA*VTELRESVFTTKNF
Trigger: AAAGTTCTTTGTTGTAAATACAGACTCTCTCAGCTCAGTCACCAATGCAACTTCCATACAAATCACTGCTCCTGCTTCTATGTTGATAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp CAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAGCTGATGCAGAAAACATATGCCAATTTATaGCCCACTGGTGACCATGTG +
Preference number: 2 (lower is better)
Translates to: QSLHKNNSYLLFQQLMQKTYANL*PTGDHV
Trigger: CACATGGTCACCAGTGGGTCATAAATTGGCATATGT...TTTCTGCATCAGCTGCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp TATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGAACTTTCCCCGTCCATGTaGTTCTGTAACTTGGTAAAT +
Preference number: 2 (lower is better)
Translates to: YDQPQIAIRLLSTNPIFELSPSM*FCNLVN
Trigger: ATTTACCAAGTTACAGAATCACATGGACGGGGAAAG...TTCAAAAATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp CTTGCCATCCCTTTAAAGAAGAGAACAACATTTGAACCAGTCCAGTTAGAAAAAGAGCAGAGTAGGCACTaGAGACTTCCTCTTCATAAA +
Preference number: 2 (lower is better)
Translates to: LAIPLKKRTTFEPVQLEKEQSRH*RLPLHK
Trigger: TTTATGAAGAGGAAGTCTTCAGTGCCTACTCTGCTC...TTTTTCTAACTGGACTGGTTCAAATGTTGTTCTCTTCTTTAAAGGGATGGCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp TATTTTCATCTTTTAACAGGGCAAGCTGATGTGTTCACATCTCAGTTTCAAGCTAGTTCTGAATCCTCCTaGGCCACTGCAAAGAAATTC +
Preference number: 2 (lower is better)
Translates to: YFHLLTGQADVFTSQFQASSESS*ATAKKF
Trigger: GAATTTCTTTGCAGTGGCTCAGGAGGATTCAGAACT...AGCTTGAAACTGAGATGTGAACACATCAGCTTGCCCTGTTAAAAGATGAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp AACTTCAAATGTTCCCAGTCTTCTGTTGATTGCATGCATGATCTTATCTCCTTGGGTAAAATGAGGTTCTaGAGGCCTAAATCTTCCAAC +
Preference number: 2 (lower is better)
Translates to: NFKCSQSSVDCMHDLISLGKMRF*RPKSSN
Trigger: GTTGGAAGATTTAGGCCTTCAGAACCTCATTTTACC...CAAGGAGATAAGATCATGCATGCAATCAACAGAAGACTGGGAACATTTGAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp CAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAGCTGATGCAGAAATTTCTCAGAAAACTGTaGCAGTCTGGCTGTGAACAG +
Preference number: 2 (lower is better)
Translates to: QSLHKNNSYLLFQQLMQKFLRKL*QSGCEQ
Trigger: CTGTTCACAGCCAGACTGGCACAGTTTTCTGAGAAA...TTTCTGCATCAGCTGCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp GACTACATGGGCCTGCATACACATCTAATAGTAGAGGATATTTCTTGGATTTATTTTCTCAGAAAACTGTaGCAGTCTGGCTGTGAACAG +
Preference number: 2 (lower is better)
Translates to: DYMGLHTHLIVEDISWIYFLRKL*QSGCEQ
Trigger: CTGTTCACAGCCAGACTGGCACAGTTTTCTGAGAAA...ATAAATCCAAGAAATATCCTCTACTATTAGATGTGTATGCAGGCCCATGTAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp CTTGCCATCCCTTTAAAGAAGAGAACAACATTTGAACCAGTCCAGTTAGAAAAACTTTCCCATCACCCTTaGTGTGTTTTTGTAGCACCT +
Preference number: 2 (lower is better)
Translates to: LAIPLKKRTTFEPVQLEKLSHHP*CVFVAP
Trigger: AGGTGCTACAAAAACACAGCAAGGGTGATGGGAAAG...TTTTTCTAACTGGACTGGTTCAAATGTTGTTCTCTTCTTTAAAGGGATGGCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp TATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGAACTTTATCATTCACGCTaGTGTGTAGAGTATAGAGGG +
Preference number: 2 (lower is better)
Translates to: YDQPQIAIRLLSTNPIFELYHSR*CVEYRG
Trigger: CCCTCTATACTCTACACAGCAGCGTGAATGATAAAG...TTCAAAAATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp TACATGGGCCTGCATACACATCTAATAGTAGAGGATATTTCTTGGATTTATCAATCCTGCCTTTGGATATaGAACCCGTACAGTCTTTGG +
Preference number: 2 (lower is better)
Translates to: YMGLHTHLIVEDISWIYQSCLWI*NPYSLW
Trigger: CCAAAGACTGTACGGGTTCCATATCCAAAGGCAGGA...TTGATAAATCCAAGAAATATCCTCTACTATTAGATGTGTATGCAGGCCCATGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp CATATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGAAAGAACTTTACAGTTaGATTCACAGCTCCTGCCTT +
Preference number: 2 (lower is better)
Translates to: HMTSPKLQFVCCPQIPFLKELYS*IHSSCL
Trigger: AAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTT...CAAAAATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp TATTTTCATCTTTTAACAGGGCAAGCTGATGTGTTCACATCTCAGTTTCAAGCTGTATACCACATTGCCTaGAAATCCACTCCAACATCG +
Preference number: 2 (lower is better)
Translates to: YFHLLTGQADVFTSQFQAVYHIA*KSTPTS
Trigger: CGATGTTGGAGTGGATTTCCAGGCAATGTGGTATAC...AGCTTGAAACTGAGATGTGAACACATCAGCTTGCCCTGTTAAAAGATGAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp TATTTTCATCTTTTAACAGGGCAAGCTGATGTGTTCACATCTCAGTTTCAAGCTTTTAACAGGGCAAGCTaGTGTGTTCACATCTCAGTT +
Preference number: 2 (lower is better)
Translates to: YFHLLTGQADVFTSQFQAFNRAS*CVHISV
Trigger: AACTGAGATGTGAACACATCAGCTTGCCCTGTTAAA...AGCTTGAAACTGAGATGTGAACACATCAGCTTGCCCTGTTAAAAGATGAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp TTGAAAATTGTCTGGCTGCTTCAATTTGATCTTCAACTTCAAATGTTCCCAGTCCTTTCCCCGTCCATGTaGTTCTGTAACTTGGTAAAT +
Preference number: 2 (lower is better)
Translates to: LKIVWLLQFDLQLQMFPVLSPSM*FCNLVN
Trigger: ATTTACCAAGTTACAGAATCACATGGACGGGGAAAG...GACTGGGAACATTTGAAGTTGAAGATCAAATTGAAGCAGCCAGACAATTTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp TATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGAAAGTCACAAATATCCATaGCCGAATAGTTCTGAATCC +
Preference number: 2 (lower is better)
Translates to: YDQPQIAIRLLSTNPIFESHKYP*PNSSES
Trigger: GGATTCAGAACTATTCGGTCATGGATATTTGTGACT...TTCAAAAATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp GACTACATGGGCCTGCATACACATCTAATAGTAGAGGATATTTCTTGGATTTATCCATCAAGGGTAAAATaGGGTTCTGAAGGCCTAAAT +
Preference number: 2 (lower is better)
Translates to: DYMGLHTHLIVEDISWIYPSRVK*GSEGLN
Trigger: ATTTAGGCCTTCAGAACCTCATTTTACCCTTGATGG...ATAAATCCAAGAAATATCCTCTACTATTAGATGTGTATGCAGGCCCATGTAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp TTGAAAATTGTCTGGCTGCTTCAATTTGATCTTCAACTTCAAATGTTCCCAGTCCGCCTCTTTACTGAATaGCACAGAATAGTACTGACA +
Preference number: 2 (lower is better)
Translates to: LKIVWLLQFDLQLQMFPVRLFTE*HRIVLT
Trigger: TGTCAGTACTATTCTGTGTCATTCAGTAAAGAGGCG...GACTGGGAACATTTGAAGTTGAAGATCAAATTGAAGCAGCCAGACAATTTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp AGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACTGCTGTGGTTTTACTTAGAATTTCTCAGAAAACTGTaGCAGTCTGGCTGTGAACAG +
Preference number: 2 (lower is better)
Translates to: SFPYISLESFQLLWFYLEFLRKL*QSGCEQ
Trigger: CTGTTCACAGCCAGACTGGCACAGTTTTCTGAGAAA...TTCTAAGTAAAACCACAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp TCACTGGTTAGAGCTTCTATCCCGATGACTTCCCAGGTGCCTTTTGTAATAAATTCTAAGAGAATAAACTaGCCATCAGGAGATATTGAA +
Preference number: 2 (lower is better)
Translates to: SLVRASIPMTSQVPFVINSKRIN*PSGDIE
Trigger: TTCAATATCTCCTGATGGGCAGTTTATTCTCTTAGA...ATTTATTACAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTCTAACCAGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416189.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp TTTCATCTTTTAACAGGGCAAGCTGATGTGTTCACATCTCAGTTTCAAGCTGCCTCTAAGAGAATAAACTaGCCATCAGGAGATATTGAA +
Preference number: 2 (lower is better)
Translates to: FHLLTGQADVFTSQFQAASKRIN*PSGDIE
Trigger: TTCAATATCTCCTGATGGGCAGTTTATTCTCTTAGA...GGCAGCTTGAAACTGAGATGTGAACACATCAGCTTGCCCTGTTAAAAGATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp TTACAACAAAGAACTTTACAGTTGGATTCACAGCTCCTGCCTTTGGATATGGAAATCCTCCTGAGCCACTaGAAAGAAATTCTTTCTTGT +
Preference number: 2 (lower is better)
Translates to: LQQRTLQLDSQLLPLDMEILLSH*KEILSC
Trigger: ACAAGAAAGAATTTCTTTGCAGTGGCTCAGGAGGAT...TTCCATATCCAAAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTTGTTGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp TACATGGGCCTGCATACACATCTAATAGTAGAGGATATTTCTTGGATTTATCAACTCATTTCAATGTGTTaGCGTGCCACTAAGCAGTTC +
Preference number: 2 (lower is better)
Translates to: YMGLHTHLIVEDISWIYQLISMC*RATKQF
Trigger: GAACTGCTTAGTGGCACGGCAACACATTGAAATGAG...TTGATAAATCCAAGAAATATCCTCTACTATTAGATGTGTATGCAGGCCCATGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp TTGAAAATTGTCTGGCTGCTTCAATTTGATCTTCAACTTCAAATGTTCCCAGTCAATGTTTTCTGTGCTTaGAAGGTAAGTGGCCCAGTT +
Preference number: 2 (lower is better)
Translates to: LKIVWLLQFDLQLQMFPVNVFCA*KVSGPV
Trigger: AACTGGGCCACTTACCTTGCAAGCACAGAAAACATT...GACTGGGAACATTTGAAGTTGAAGATCAAATTGAAGCAGCCAGACAATTTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp CAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAGCTGATGCAGAAAAATGTTTTCTGTGCTTaGAAGGTAAGTGGCCCAGTT +
Preference number: 2 (lower is better)
Translates to: QSLHKNNSYLLFQQLMQKNVFCA*KVSGPV
Trigger: AACTGGGCCACTTACCTTGCAAGCACAGAAAACATT...TTTCTGCATCAGCTGCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp TATTTTCATCTTTTAACAGGGCAAGCTGATGTGTTCACATCTCAGTTTCAAGCTATCAGTATACCACATTaGCTGGAAATCCACTCCAAC +
Preference number: 2 (lower is better)
Translates to: YFHLLTGQADVFTSQFQAISIPH*LEIHSN
Trigger: GTTGGAGTGGATTTCCAGGCAATGTGGTATACTGAT...AGCTTGAAACTGAGATGTGAACACATCAGCTTGCCCTGTTAAAAGATGAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp GGTATATATATGTTGGTGTGCTGTGCTGCTAGCTATTCCATGGTCTTCATCAGTTCTTTTCAACTGCTGTaGTTTTACTTAGAAGTCAGT +
Preference number: 2 (lower is better)
Translates to: GIYMLVCCAASYSMVFISSFQLL*FYLEVS
Trigger: ACTGACTTCTAAGTAAAACCACAGCAGTTGAAAAGA...ACTGATGAAGACCATGGAATAGCTAGCAGCACAGCACACCAACATATATATACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp TTGAATTTCTGTAATGGTCAAGGTTGTCTTCTGGAGTTGGGAGACCCATGTAACTCTTTTCAACTGCTGTaGTTTTACTTAGAAGTCAGT +
Preference number: 2 (lower is better)
Translates to: LNFCNGQGCLLELGDPCNSFQLL*FYLEVS
Trigger: ACTGACTTCTAAGTAAAACCACAGCAGTTGAAAAGA...GTTACATGGGTCTCCCAACTCCAGAAGACAACCTTGACCATTACAGAAATTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp TTACAACAAAGAACTTTACAGTTGGATTCACAGCTCCTGCCTTTGGATATGGAAAAAGAACTTTACAGTTaGATTCACAGCTCCTGCCTT +
Preference number: 2 (lower is better)
Translates to: LQQRTLQLDSQLLPLDMEKELYS*IHSSCL
Trigger: AAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTT...TTCCATATCCAAAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTTGTTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR CAA 90 bp GAAGCAGTATCTAATAGCTTGTTCGTTCAAGCCAGAAAGTCAGGTTaGAATATAGATTCGTACTTGGTCATTTTCTTAATCTGTAGGCCT +
Preference number: 2 (lower is better)
Translates to: EAVSNSLFVQARKSG*NIDSYLVIFLICRP
Trigger: AGGCCTACAGATTAAGAAAATGACCAAGTACGAATCTATATTCAAACCTGACTTTCTGGCTTGAACGAACAAGCTATTAGATACTGCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434918.6
ENST00000678566.1
3UTR-3UTR TCA 90 bp AGGGAATCTATGCAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAGGGTAATAATCTGTTGTaGAGACAGAAGTCCCTACTT +
Preference number: 2 (lower is better)
Translates to: RESMQSLHKNNSYLLFQQGNNLL*RQKSLL
Trigger: AAGTAGGGACTTCTGTCTTCACAACAGATTATTACC...CTGCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTGCATAGATTCCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp TTGAAAATTGTCTGGCTGCTTCAATTTGATCTTCAACTTCAAATGTTCCCAGTCGGTAATAATCTGTTGTaGAGACAGAAGTCCCTACTT +
Preference number: 2 (lower is better)
Translates to: LKIVWLLQFDLQLQMFPVGNNLL*RQKSLL
Trigger: AAGTAGGGACTTCTGTCTTCACAACAGATTATTACC...GACTGGGAACATTTGAAGTTGAAGATCAAATTGAAGCAGCCAGACAATTTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp TTGAAAATTGTCTGGCTGCTTCAATTTGATCTTCAACTTCAAATGTTCCCAGTCACTTCGCCTCTTTACTaGATGACACAGAATAGTACT +
Preference number: 2 (lower is better)
Translates to: LKIVWLLQFDLQLQMFPVTSPLY*MTQNST
Trigger: AGTACTATTCTGTGTCATTCAGTAAAGAGGCGAAGT...GACTGGGAACATTTGAAGTTGAAGATCAAATTGAAGCAGCCAGACAATTTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp CAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAGCTGATGCAGAAAACTTCGCCTCTTTACTaGATGACACAGAATAGTACT +
Preference number: 2 (lower is better)
Translates to: QSLHKNNSYLLFQQLMQKTSPLY*MTQNST
Trigger: AGTACTATTCTGTGTCATTCAGTAAAGAGGCGAAGT...TTTCTGCATCAGCTGCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp CAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAGCTGATGCAGAAAAAAGCACATTTACAATaGTTTCCCATCACCCTTGCT +
Preference number: 2 (lower is better)
Translates to: QSLHKNNSYLLFQQLMQKKAHLQ*FPITLA
Trigger: AGCAAGGGTGATGGGAAAGCATTGTAAATGTGCTTT...TTTCTGCATCAGCTGCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTG
38% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp GACTACATGGGCCTGCATACACATCTAATAGTAGAGGATATTTCTTGGATTTATAAAGCACATTTACAATaGTTTCCCATCACCCTTGCT +
Preference number: 2 (lower is better)
Translates to: DYMGLHTHLIVEDISWIYKAHLQ*FPITLA
Trigger: AGCAAGGGTGATGGGAAAGCATTGTAAATGTGCTTT...ATAAATCCAAGAAATATCCTCTACTATTAGATGTGTATGCAGGCCCATGTAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp AATATCCATGACCGAATAGTTCTGAATCCTCCTGAGCCACTGCAAAGAAATTCTTCTAAGAGAATAAACTaGCCATCAGGAGATATTGAA +
Preference number: 2 (lower is better)
Translates to: NIHDRIVLNPPEPLQRNSSKRIN*PSGDIE
Trigger: TTCAATATCTCCTGATGGGCAGTTTATTCTCTTAGA...AGAATTTCTTTGCAGTGGCTCAGGAGGATTCAGAACTATTCGGTCATGGATATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416189.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp TATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGAAAATTCTTTCTTGTGTTaGCCATGTCACATCACACAA +
Preference number: 2 (lower is better)
Translates to: YDQPQIAIRLLSTNPIFENSFLC*PCHITQ
Trigger: TTGTGTGATGTGACATGGGCAACACAAGAAAGAATT...TTCAAAAATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp TTGAAAATTGTCTGGCTGCTTCAATTTGATCTTCAACTTCAAATGTTCCCAGTCATCCTCCTGAGCCACTaGAAAGAAATTCTTTCTTGT +
Preference number: 2 (lower is better)
Translates to: LKIVWLLQFDLQLQMFPVILLSH*KEILSC
Trigger: ACAAGAAAGAATTTCTTTGCAGTGGCTCAGGAGGAT...GACTGGGAACATTTGAAGTTGAAGATCAAATTGAAGCAGCCAGACAATTTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp CAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAGCTGATGCAGAAAATCCTCCTGAGCCACTaGAAAGAAATTCTTTCTTGT +
Preference number: 2 (lower is better)
Translates to: QSLHKNNSYLLFQQLMQKILLSH*KEILSC
Trigger: ACAAGAAAGAATTTCTTTGCAGTGGCTCAGGAGGAT...TTTCTGCATCAGCTGCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp CAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAGCTGATGCAGAAACTTCTGTTGATTGCATaGATGATCTTATCTCCTTGG +
Preference number: 2 (lower is better)
Translates to: QSLHKNNSYLLFQQLMQKLLLIA*MILSPW
Trigger: CCAAGGAGATAAGATCATGCATGCAATCAACAGAAG...TTTCTGCATCAGCTGCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp AATATCCATGACCGAATAGTTCTGAATCCTCCTGAGCCACTGCAAAGAAATTCTTCTTTTCAACTGCTGTaGTTTTACTTAGAAGTCAGT +
Preference number: 2 (lower is better)
Translates to: NIHDRIVLNPPEPLQRNSSFQLL*FYLEVS
Trigger: ACTGACTTCTAAGTAAAACCACAGCAGTTGAAAAGA...AGAATTTCTTTGCAGTGGCTCAGGAGGATTCAGAACTATTCGGTCATGGATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp GACTACATGGGCCTGCATACACATCTAATAGTAGAGGATATTTCTTGGATTTATCCACTGTGTGTTGTTTaGAATCCTCTCTTCTGTAAT +
Preference number: 2 (lower is better)
Translates to: DYMGLHTHLIVEDISWIYPLCVV*NPLFCN
Trigger: ATTACAGAAGAGAGGATTCCAAACAACACACAGTGG...ATAAATCCAAGAAATATCCTCTACTATTAGATGTGTATGCAGGCCCATGTAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416189.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp AACTTCAAATGTTCCCAGTCTTCTGTTGATTGCATGCATGATCTTATCTCCTTGGGAGTATTCAATAAGTaGGACTTCTGTGTCGTTAAA +
Preference number: 2 (lower is better)
Translates to: NFKCSQSSVDCMHDLISLGVFNK*DFCVVK
Trigger: TTTAACGACACAGAAGTCCCACTTATTGAATACTCC...CAAGGAGATAAGATCATGCATGCAATCAACAGAAGACTGGGAACATTTGAAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp TATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGAAAGTTCCATCTTCCACTaGATTCATCATAGTCACAAA +
Preference number: 2 (lower is better)
Translates to: YDQPQIAIRLLSTNPIFESSIFH*IHHSHK
Trigger: TTTGTGACTATGATGAATCCAGTGGAAGATGGAACT...TTCAAAAATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp AACTTCAAATGTTCCCAGTCTTCTGTTGATTGCATGCATGATCTTATCTCCTTGAGTATAGATAATCACTaGTTAGAGCTTCTATCCCGA +
Preference number: 2 (lower is better)
Translates to: NFKCSQSSVDCMHDLISLSIDNH*LELLSR
Trigger: TCGGGATAGAAGCTCTAACCAGTGATTATCTATACT...CAAGGAGATAAGATCATGCATGCAATCAACAGAAGACTGGGAACATTTGAAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp AGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACTGCTGTGGTTTTACTTAGAAGGTAATAATCTGTTGTaGAGACAGAAGTCCCTACTT +
Preference number: 2 (lower is better)
Translates to: SFPYISLESFQLLWFYLEGNNLL*RQKSLL
Trigger: AAGTAGGGACTTCTGTCTTCACAACAGATTATTACC...TTCTAAGTAAAACCACAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp TACATGGGCCTGCATACACATCTAATAGTAGAGGATATTTCTTGGATTTATCAAACTTCGCCTCTTTACTaGATGACACAGAATAGTACT +
Preference number: 2 (lower is better)
Translates to: YMGLHTHLIVEDISWIYQTSPLY*MTQNST
Trigger: AGTACTATTCTGTGTCATTCAGTAAAGAGGCGAAGT...TTGATAAATCCAAGAAATATCCTCTACTATTAGATGTGTATGCAGGCCCATGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp AATCATAAATGTCATATGAAGCTGTGTAGGAATGCCTCCATTGCTTCACGTAGTTCTAAGAGAATAAACTaGCCATCAGGAGATATTGAA +
Preference number: 2 (lower is better)
Translates to: NHKCHMKLCRNASIASRSSKRIN*PSGDIE
Trigger: TTCAATATCTCCTGATGGGCAGTTTATTCTCTTAGA...ACTACGTGAAGCAATGGAGGCATTCCTACACAGCTTCATATGACATTTATGATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413651.3
ENST00000676479.1
ENST00000676624.1
3UTR-3UTR GCA 90 bp TCAGGGAATCTATGCAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCATTGTTCCAAACATATaGCAATTTATGACCCACTGG +
Preference number: 2 (lower is better)
Translates to: SGNLCKASIKTIPICCFSIVPNI*QFMTHW
Trigger: CCAGTGGGTCATAAATTGGCATATGTTTGGAACAAT...GCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTGCATAGATTCCCTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR GCA 90 bp CAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAGCTGATGCAGAAAAATTCTTTCTTGTGTTaGCCATGTCACATCACACAA +
Preference number: 2 (lower is better)
Translates to: QSLHKNNSYLLFQQLMQKNSFLC*PCHITQ
Trigger: TTGTGTGATGTGACATGGGCAACACAAGAAAGAATT...TTTCTGCATCAGCTGCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp TACATGGGCCTGCATACACATCTAATAGTAGAGGATATTTCTTGGATTTATCAATTTTTGGAGGGCATCTaGACATTCTGCAGCATTTTA +
Preference number: 2 (lower is better)
Translates to: YMGLHTHLIVEDISWIYQFLEGI*TFCSIL
Trigger: TAAAATGCTGCAGAATGTCCAGATGCCCTCCAAAAA...TTGATAAATCCAAGAAATATCCTCTACTATTAGATGTGTATGCAGGCCCATGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR CAA 90 bp TTGTTCGTTCAAGCCAGAAAGTCAGGTTTGAATATAGATTCGTACTaGGTCATTTTCTTAATCTGTAGGCCTCATTTTCTTATCCTATCA +
Preference number: 2 (lower is better)
Translates to: LFVQARKSGLNIDSY*VIFLICRPHFLILS
Trigger: TGATAGGATAAGAAAATGAGGCCTACAGATTAAGAAAATGACCAAGTACGAATCTATATTCAAACCTGACTTTCTGGCTTGAACGAACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434918.6
3UTR-3UTR TCA 90 bp AGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACTGCTGTGGTTTTACTTAGAAAGATCATCATCATCTTaGCAGTGCAGTTTTGAGATA +
Preference number: 2 (lower is better)
Translates to: SFPYISLESFQLLWFYLERSSSS*QCSFEI
Trigger: TATCTCAAAACTGCACTGTCAAGATGATGATGATCT...TTCTAAGTAAAACCACAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR TCA 90 bp AGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACTGCTGTGGTTTTACTTAGAAGAAGAGAACAACATTTaGACCAGTCCAGTTAGAAAA +
Preference number: 2 (lower is better)
Translates to: SFPYISLESFQLLWFYLEEENNI*TSPVRK
Trigger: TTTTCTAACTGGACTGGTTCAAATGTTGTTCTCTTC...TTCTAAGTAAAACCACAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR CCA 90 bp TACATGGGCCTGCATACACATCTAATAGTAGAGGATATTTCTTGGATTTATCAAGGAGTATTCAATAAGTaGGACTTCTGTGTCGTTAAA +
Preference number: 2 (lower is better)
Translates to: YMGLHTHLIVEDISWIYQGVFNK*DFCVVK
Trigger: TTTAACGACACAGAAGTCCCACTTATTGAATACTCC...TTGATAAATCCAAGAAATATCCTCTACTATTAGATGTGTATGCAGGCCCATGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR TCA 72 bp CCCACCGGGATACAGGCGCCACGGCTATTCCACACTTaGACACGCCACTTCCCGATCCCAGGACCATTGAGG +
Preference number: 3 (lower is better)
Translates to: PTGIQAPRLFHT*TRHFPIPGPLR
Trigger: CCTCAATGGTCCTGGGATCGGGAAGTGGCGTGTTCAAGTGTGGAATAGCCGTGGCGCCTGTATCCCGGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR CCA 72 bp AGAAACTTCCGGAGAGCCCCGCTGCCAGCAACAGCCTaGCAAGGAGAAGTGGGAAGGATCGGTCCAGTGGCA +
Preference number: 3 (lower is better)
Translates to: RNFRRAPLPATA*QGEVGRIGPVA
Trigger: TGCCACTGGACCGATCCTTCCCACTTCTCCTTGCCAGGCTGTTGCTGGCAGCGGGGCTCTCCGGAAGTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416189.6
3UTR GCA 72 bp CCGAGGGGAGCTGACAGTAGCCTGCTCGTGTTGGTATaGTTGGACTTGGGTTCCCAGCCATGCCCTGCTATC +
Preference number: 3 (lower is better)
Translates to: PRGADSSLLVLV*LDLGSQPCPAI
Trigger: GATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTCCCCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR GCA 72 bp ACTCTCCTGAGGCTAGAAACTTCCGGAGAGCCCCGCTaGCAGCAACAGCCTGGCAAGGAGAAGTGGGAAGGA +
Preference number: 3 (lower is better)
Translates to: TLLRLETSGEPR*QQQPGKEKWEG
Trigger: TCCTTCCCACTTCTCCTTGCCAGGCTGTTGCTGGCAGCGGGGCTCTCCGGAAGTTTCTAGCCTCAGGAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416189.6
3UTR CCA 72 bp CTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGTTaGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTG +
Preference number: 3 (lower is better)
Translates to: LLRGELTVACSC*YAWTWVPSHAL
Trigger: CAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp CTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTCGTGTTGGTATGCTaGGACTTGGGTTCCCAGCCA +
Preference number: 3 (lower is better)
Translates to: LTVACSCWYAWTWVPSHALVLVC*DLGSQP
Trigger: TGGCTGGGAACCCAAGTCCAAGCATACCAACACGAG...GGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp CAGAGACAATGCTCTGGCTTTGCCGTGGCATCCACACTAGCACATGGGGGCTGTCCGATCCCAGGACCATaGAGGTTACGTACCCTCCAT +
Preference number: 3 (lower is better)
Translates to: QRQCSGFAVASTLAHGGCPIPGP*RLRTLH
Trigger: ATGGAGGGTACGTAACCTCAATGGTCCTGGGATCGG...ACAGCCCCCATGTGCTAGTGTGGATGCCACGGCAAAGCCAGAGCATTGTCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494507.2
3UTR CCA 72 bp GGGGAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTaGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCT +
Preference number: 3 (lower is better)
Translates to: GELTVACSCWYA*TWVPSHALLSS
Trigger: AGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR CCA 72 bp TCCAGCTGCATCAATGTGGCACCAGAGACAATGCTCTaGCTTTGCCGTGGCATCCACACTAGCACATGGGGG +
Preference number: 3 (lower is better)
Translates to: SSCINVAPETML*LCRGIHTSTWG
Trigger: CCCCCATGTGCTAGTGTGGATGCCACGGCAAAGCCAGAGCATTGTCTCTGGTGCCACATTGATGCAGCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494507.2
3UTR-3UTR CAA 90 bp TGTTTTTGTAGCACCTATAGCCATAACTGGCACCTGGGGGCCTGCGTTGCTGGCTTGGTATGCTTGGACTaGGGTTCCCAGCCATGCCCT +
Preference number: 3 (lower is better)
Translates to: CFCSTYSHNWHLGACVAGLVCLD*GSQPCP
Trigger: AGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAA...GCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGTGCTACAAAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp GCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCCTCGTGTTGGTATGCTaGGACTTGGGTTCCCAGCCA +
Preference number: 3 (lower is better)
Translates to: ARVGMLGLGFPAMPCYLLLVLVC*DLGSQP
Trigger: TGGCTGGGAACCCAAGTCCAAGCATACCAACACGAG...GAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp ATTCCACACTTGAACACGCCACTTCCCGATCCCAGGACCATTGAGGTTACGTACACCTGGGGGCCTGCGTaGCTGGCAGTTTCCCTTACA +
Preference number: 3 (lower is better)
Translates to: IPHLNTPLPDPRTIEVTYTWGPA*LAVSLT
Trigger: TGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGT...GTACGTAACCTCAATGGTCCTGGGATCGGGAAGTGGCGTGTTCAAGTGTGGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp TATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGACCAGGACCGGAACATCACCTGGGGGCCTGCGTaGCTGGCAGTTTCCCTTACA +
Preference number: 3 (lower is better)
Translates to: YHSRCCVEYRGADQDRNITWGPA*LAVSLT
Trigger: TGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGT...GATGTTCCGGTCCTGGTCTGCCCCTCTATACTCTACACAGCAGCGTGAATGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR GCA 72 bp TGCATCAATGTGGCACCAGAGACAATGCTCTGGCTTTaGCGTGGCATCCACACTAGCACATGGGGGCTGTCA +
Preference number: 3 (lower is better)
Translates to: CINVAPETMLWL*RGIHTSTWGLS
Trigger: TGACAGCCCCCATGTGCTAGTGTGGATGCCACGGCAAAGCCAGAGCATTGTCTCTGGTGCCACATTGATGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494507.2
3UTR CCA 72 bp CCCTTGCTGTGTTTTTGTAGCACCTATAGCCATAACTaGCACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCT +
Preference number: 3 (lower is better)
Translates to: PLLCFCSTYSHN*HLGACVAGSFP
Trigger: AGGGAAACTGCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGTGCTACAAAAACACAGCAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp TGTTTTTGTAGCACCTATAGCCATAACTGGCACCTGGGGGCCTGCGTTGCTGGCAGTAGCCTGCTCGTGTaGGTATGCTTGGACTTGGGT +
Preference number: 3 (lower is better)
Translates to: CFCSTYSHNWHLGACVAGSSLLV*VCLDLG
Trigger: ACCCAAGTCCAAGCATACCAACACGAGCAGGCTACT...GCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGTGCTACAAAAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp GTCATAGTACTCCCACCGGGATACAGGCGCCACGGCTATTCCACACTTGAACACAGTAGCCTGCTCGTGTaGGTATGCTTGGACTTGGGT +
Preference number: 3 (lower is better)
Translates to: VIVLPPGYRRHGYSTLEHSSLLV*VCLDLG
Trigger: ACCCAAGTCCAAGCATACCAACACGAGCAGGCTACT...GTGTTCAAGTGTGGAATAGCCGTGGCGCCTGTATCCCGGTGGGAGTACTATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp GCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCAGTAGCCTGCTCGTGTaGGTATGCTTGGACTTGGGT +
Preference number: 3 (lower is better)
Translates to: ARVGMLGLGFPAMPCYLLSSLLV*VCLDLG
Trigger: ACCCAAGTCCAAGCATACCAACACGAGCAGGCTACT...GAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp GGCACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTCACAGCTCCTGCCTTaGGATATGGAACCCGTACAG +
Preference number: 3 (lower is better)
Translates to: GTWGPALLAVSLTFLWSLSQLLP*DMEPVQ
Trigger: CTGTACGGGTTCCATATCCAAAGGCAGGAGCTGTGA...AAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR GCA 72 bp TGTCTTCCAGGACTCTCAGCCCTTTATCATTCACGCTaGTGTGTAGAGTATAGAGGGGCAGACCAGGACCGG +
Preference number: 3 (lower is better)
Translates to: CLPGLSALYHSR*CVEYRGADQDR
Trigger: CCGGTCCTGGTCTGCCCCTCTATACTCTACACAGCAGCGTGAATGATAAAGGGCTGAGAGTCCTGGAAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR GCA 72 bp GCACTTCCAGCTGCATCAATGTGGCACCAGAGACAATaGTCTGGCTTTGCCGTGGCATCCACACTAGCACAT +
Preference number: 3 (lower is better)
Translates to: ALPAASMWHQRQ*SGFAVASTLAH
Trigger: ATGTGCTAGTGTGGATGCCACGGCAAAGCCAGAGCATTGTCTCTGGTGCCACATTGATGCAGCTGGAAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494507.2
3UTR-3UTR CAA 90 bp ATTCCACACTTGAACACGCCACTTCCCGATCCCAGGACCATTGAGGTTACGTACCTCGTGTTGGTATGCTaGGACTTGGGTTCCCAGCCA +
Preference number: 3 (lower is better)
Translates to: IPHLNTPLPDPRTIEVTYLVLVC*DLGSQP
Trigger: TGGCTGGGAACCCAAGTCCAAGCATACCAACACGAG...GTACGTAACCTCAATGGTCCTGGGATCGGGAAGTGGCGTGTTCAAGTGTGGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp CCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTGCTTTCCCATCACCCTaGCTGTGTTTTTGTAGCACC +
Preference number: 3 (lower is better)
Translates to: PARVGMLGLGFPAMPCYLAFPSP*LCFCST
Trigger: GGTGCTACAAAAACACAGCAAGGGTGATGGGAAAGC...AAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp GTCATAGTACTCCCACCGGGATACAGGCGCCACGGCTATTCCACACTTGAACACGAACCCGTACAGTCTTaGGGTACTGCAGTGACTCAT +
Preference number: 3 (lower is better)
Translates to: VIVLPPGYRRHGYSTLEHEPVQS*GTAVTH
Trigger: ATGAGTCACTGCAGTACCCAAAGACTGTACGGGTTC...GTGTTCAAGTGTGGAATAGCCGTGGCGCCTGTATCCCGGTGGGAGTACTATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp ACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCCCGATCCCAGGACCATaGAGGTTACGTACCCTCCAT +
Preference number: 3 (lower is better)
Translates to: TWGPALLAVSLTFLWSLFPIPGP*RLRTLH
Trigger: ATGGAGGGTACGTAACCTCAATGGTCCTGGGATCGG...GAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR TCA 72 bp GCAACTCCAGAGAAAATGGATGCTTCCGTACTGCTGTaGTGGTGCCTTCAGGAATCTGAGGGCACCAGCTGT +
Preference number: 3 (lower is better)
Translates to: ATPEKMDASVLL*WCLQESEGTSC
Trigger: ACAGCTGGTGCCCTCAGATTCCTGAAGGCACCATCACAGCAGTACGGAAGCATCCATTTTCTCTGGAGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434918.6
ENST00000678566.1
3UTR GCA 72 bp TGTAGCACCTATAGCCATAACTGGCACCTGGGGGCCTaGGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAG +
Preference number: 3 (lower is better)
Translates to: CSTYSHNWHLGA*VAGSFPYISLE
Trigger: CTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGTGCTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR CCA 72 bp AGTGATAAATGGGCAAGGATGCAATGGTGGTGCAGTTaGCACTCTCCTGAGGCTAGAAACTTCCGGAGAGCC +
Preference number: 3 (lower is better)
Translates to: SDKWARMQWWCS*HSPEARNFRRA
Trigger: GGCTCTCCGGAAGTTTCTAGCCTCAGGAGAGTGCCAACTGCACCACCATTGCATCCTTGCCCATTTATCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416189.6
3UTR CCA 72 bp ATGCTCTGGCTTTGCCGTGGCATCCACACTAGCACATaGGGGCTGTCAATGATAGTTGCACCCACACCATAT +
Preference number: 3 (lower is better)
Translates to: MLWLCRGIHTST*GLSMIVAPTPY
Trigger: ATATGGTGTGGGTGCAACTATCATTGACAGCCCCCATGTGCTAGTGTGGATGCCACGGCAAAGCCAGAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494507.2
3UTR-3UTR CAA 90 bp GAGGGGCAGACCAGGACCGGAACATCTCAGCTGATAATACTTCGCCTCTTTACTAGTAGCCTGCTCGTGTaGGTATGCTTGGACTTGGGT +
Preference number: 3 (lower is better)
Translates to: EGQTRTGTSQLIILRLFTSSLLV*VCLDLG
Trigger: ACCCAAGTCCAAGCATACCAACACGAGCAGGCTACT...AGTAAAGAGGCGAAGTATTATCAGCTGAGATGTTCCGGTCCTGGTCTGCCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp CTCTCAGCCCTTTATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGACCAGTCACAGCTCCTGCCTTaGGATATGGAACCCGTACAG +
Preference number: 3 (lower is better)
Translates to: LSALYHSRCCVEYRGADQSQLLP*DMEPVQ
Trigger: CTGTACGGGTTCCATATCCAAAGGCAGGAGCTGTGA...CTGGTCTGCCCCTCTATACTCTACACAGCAGCGTGAATGATAAAGGGCTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp GACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTCATCAGTATACCACATaGCCTGGAAATCCACTCCAA +
Preference number: 3 (lower is better)
Translates to: DSSLLVLVCLDLGSQPCPHQYTT*PGNPLQ
Trigger: TTGGAGTGGATTTCCAGGCAATGTGGTATACTGATG...AGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp CCAGGACTCTCAGCCCTTTATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGCTTTCCCATCACCCTaGCTGTGTTTTTGTAGCACC +
Preference number: 3 (lower is better)
Translates to: PGLSALYHSRCCVEYRGAAFPSP*LCFCST
Trigger: GGTGCTACAAAAACACAGCAAGGGTGATGGGAAAGC...TGCCCCTCTATACTCTACACAGCAGCGTGAATGATAAAGGGCTGAGAGTCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp ATTCCACACTTGAACACGCCACTTCCCGATCCCAGGACCATTGAGGTTACGTACGAACCCGTACAGTCTTaGGGTACTGCAGTGACTCAT +
Preference number: 3 (lower is better)
Translates to: IPHLNTPLPDPRTIEVTYEPVQS*GTAVTH
Trigger: ATGAGTCACTGCAGTACCCAAAGACTGTACGGGTTC...GTACGTAACCTCAATGGTCCTGGGATCGGGAAGTGGCGTGTTCAAGTGTGGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp TATAGAGGGGCAGACCAGGACCGGAACATCTCAGCTGATAATACTTCGCCTCTTTCACAGCTCCTGCCTTaGGATATGGAACCCGTACAG +
Preference number: 3 (lower is better)
Translates to: YRGADQDRNISADNTSPLSQLLP*DMEPVQ
Trigger: CTGTACGGGTTCCATATCCAAAGGCAGGAGCTGTGA...AAGAGGCGAAGTATTATCAGCTGAGATGTTCCGGTCCTGGTCTGCCCCTCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp GTCATAGTACTCCCACCGGGATACAGGCGCCACGGCTATTCCACACTTGAACACAGCAGGAGCAGTGATTaGTATGGAAGTTGCATTGGT +
Preference number: 3 (lower is better)
Translates to: VIVLPPGYRRHGYSTLEHSRSSD*YGSCIG
Trigger: ACCAATGCAACTTCCATACAAATCACTGCTCCTGCT...GTGTTCAAGTGTGGAATAGCCGTGGCGCCTGTATCCCGGTGGGAGTACTATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp AACGTTCTGTGTACACTGAGTCATAGTACTCCCACCGGGATACAGGCGCCACGGAGCAGGAGCAGTGATTaGTATGGAAGTTGCATTGGT +
Preference number: 3 (lower is better)
Translates to: NVLCTLSHSTPTGIQAPRSRSSD*YGSCIG
Trigger: ACCAATGCAACTTCCATACAAATCACTGCTCCTGCT...CCGTGGCGCCTGTATCCCGGTGGGAGTACTATGACTCAGTGTACACAGAACGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp GTCATAGTACTCCCACCGGGATACAGGCGCCACGGCTATTCCACACTTGAACACATGAAGTCCAGTTTTTaGGAGGGCATCTGGACATTC +
Preference number: 3 (lower is better)
Translates to: VIVLPPGYRRHGYSTLEHMKSSF*EGIWTF
Trigger: GAATGTCCAGATGCCCTCCAAAAAACTGGACTTCAT...GTGTTCAAGTGTGGAATAGCCGTGGCGCCTGTATCCCGGTGGGAGTACTATGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp GGCACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTATGAAGTCCAGTTTTTaGGAGGGCATCTGGACATTC +
Preference number: 3 (lower is better)
Translates to: GTWGPALLAVSLTFLWSLMKSSF*EGIWTF
Trigger: GAATGTCCAGATGCCCTCCAAAAAACTGGACTTCAT...AAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp CCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTATGACCAGCCCCAAATaGCAATTCGTTTGTTGTCCA +
Preference number: 3 (lower is better)
Translates to: PARVGMLGLGFPAMPCYLMTSPK*QFVCCP
Trigger: TGGACAACAAACGAATTGCAATTTGGGGCTGGTCAT...AAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR TCA 72 bp AATAGTCTTTCTCAGAAAACTGTGCCAGTCTGGCTGTaGACAGCTCTTCTCCGAGGGGAGCTGACAGTAGCC +
Preference number: 3 (lower is better)
Translates to: NSLSQKTVPVWL*TALLRGELTVA
Trigger: GGCTACTGTCAGCTCCCCTCGGAGAAGAGCTGTTCACAGCCAGACTGGCACAGTTTTCTGAGAAAGACTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR GCA 72 bp ACTCAGAGTGATAAATGGGCAAGGATGCAATGGTGGTaGAGTTGGCACTCTCCTGAGGCTAGAAACTTCCGG +
Preference number: 3 (lower is better)
Translates to: TQSDKWARMQWW*SWHSPEARNFR
Trigger: CCGGAAGTTTCTAGCCTCAGGAGAGTGCCAACTGCACCACCATTGCATCCTTGCCCATTTATCACTCTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416189.6
3UTR-3UTR CAA 90 bp CTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGAACAATTCCTATTTGTaGTTTCAGCAGCTGATGCAG +
Preference number: 3 (lower is better)
Translates to: LLRGELTVACSCWYAWTWNNSYL*FQQLMQ
Trigger: CTGCATCAGCTGCTGAAACAACAAATAGGAATTGTT...CCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp TGTCTTCCAGGACTCTCAGCCCTTTATCATTCACGCTGCTGTGTAGAGTATAGACTCGTGTTGGTATGCTaGGACTTGGGTTCCCAGCCA +
Preference number: 3 (lower is better)
Translates to: CLPGLSALYHSRCCVEYRLVLVC*DLGSQP
Trigger: TGGCTGGGAACCCAAGTCCAAGCATACCAACACGAG...TCTATACTCTACACAGCAGCGTGAATGATAAAGGGCTGAGAGTCCTGGAAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp GATCCCAGGACCATTGAGGTTACGTACCCTCCATATGACCAGCCCCAAATTGCAGTGACCCACTGTGTGTaGTTTGGAATCCTCTCTTCT +
Preference number: 3 (lower is better)
Translates to: DPRTIEVTYPPYDQPQIAVTHCV*FGILSS
Trigger: AGAAGAGAGGATTCCAAACAACACACAGTGGGTCAC...TGCAATTTGGGGCTGGTCATATGGAGGGTACGTAACCTCAATGGTCCTGGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416189.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp ACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCGACAGTGTCTGCTTTTaGACTACATGGGCCTGCATA +
Preference number: 3 (lower is better)
Translates to: TWGPALLAVSLTFLWSLFDSVCF*TTWACI
Trigger: TATGCAGGCCCATGTAGTCAAAAAGCAGACACTGTC...GAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR TCA 72 bp AAAAAGGCAGCTGTGTCACCTTGCCTCTGGAACCATTaGTCATTCCCTACTCAACTGTGCACCCTGGCTTCT +
Preference number: 3 (lower is better)
Translates to: KKAAVSPCLWNH*SFPTQLCTLAS
Trigger: AGAAGCCAGGGTGCACAGTTGAGTAGGGAATGATCAATGGTTCCAGAGGCAAGGTGACACAGCTGCCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416189.6
3UTR GCA 72 bp AGAAGGGTCCCTAGTACTTATGCTAGCACTTCCAGCTaGATCAATGTGGCACCAGAGACAATGCTCTGGCTT +
Preference number: 3 (lower is better)
Translates to: RRVPSTYASTSS*INVAPETMLWL
Trigger: AAGCCAGAGCATTGTCTCTGGTGCCACATTGATGCAGCTGGAAGTGCTAGCATAAGTACTAGGGACCCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494507.2
3UTR CCA 72 bp TGTGTTTTTGTAGCACCTATAGCCATAACTGGCACCTaGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTT +
Preference number: 3 (lower is better)
Translates to: CVFVAPIAITGT*GPALLAVSLTF
Trigger: AAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGTGCTACAAAAACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp TGTTTTTGTAGCACCTATAGCCATAACTGGCACCTGGGGGCCTGCGTTGCTGGCTTCCCTTACATTTCTTaGGAGTCTTTTCAACTGCTG +
Preference number: 3 (lower is better)
Translates to: CFCSTYSHNWHLGACVAGFPYIS*ESFQLL
Trigger: CAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAA...GCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGTGCTACAAAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp GATCCCAGGACCATTGAGGTTACGTACCCTCCATATGACCAGCCCCAAATTGCACAAAGAACTTTACAGTaGGATTCACAGCTCCTGCCT +
Preference number: 3 (lower is better)
Translates to: DPRTIEVTYPPYDQPQIAQRTLQ*DSQLLP
Trigger: AGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTTG...TGCAATTTGGGGCTGGTCATATGGAGGGTACGTAACCTCAATGGTCCTGGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp ATTCCACACTTGAACACGCCACTTCCCGATCCCAGGACCATTGAGGTTACGTACAGCAGGAGCAGTGATTaGTATGGAAGTTGCATTGGT +
Preference number: 3 (lower is better)
Translates to: IPHLNTPLPDPRTIEVTYSRSSD*YGSCIG
Trigger: ACCAATGCAACTTCCATACAAATCACTGCTCCTGCT...GTACGTAACCTCAATGGTCCTGGGATCGGGAAGTGGCGTGTTCAAGTGTGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp GTCATAGTACTCCCACCGGGATACAGGCGCCACGGCTATTCCACACTTGAACACAAATTCTTTCTTGTGTaGCCCATGTCACATCACACA +
Preference number: 3 (lower is better)
Translates to: VIVLPPGYRRHGYSTLEHKFFLV*PMSHHT
Trigger: TGTGTGATGTGACATGGGCAACACAAGAAAGAATTT...GTGTTCAAGTGTGGAATAGCCGTGGCGCCTGTATCCCGGTGGGAGTACTATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp GGAGACCCATGTAACGTTCTGTGTACACTGAGTCATAGTACTCCCACCGGGATAGACAGTGTCTGCTTTTaGACTACATGGGCCTGCATA +
Preference number: 3 (lower is better)
Translates to: GDPCNVLCTLSHSTPTGIDSVCF*TTWACI
Trigger: TATGCAGGCCCATGTAGTCAAAAAGCAGACACTGTC...TATCCCGGTGGGAGTACTATGACTCAGTGTACACAGAACGTTACATGGGTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR TCA 72 bp TGCCGTTTGGAGACCACCACAGAGCAGAGTAGGCACTaGAGACTTCCTCTTCATAAACCCAGTCAGTTATTC +
Preference number: 3 (lower is better)
Translates to: CRLETTTEQSRH*RLPLHKPSQLF
Trigger: GAATAACTGACTGGGTTTATGAAGAGGAAGTCTTCAGTGCCTACTCTGCTCTGTGGTGGTCTCCAAACGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR TCA 72 bp TTTCTGTGCTTGCAAGGTAAGTGGCCCAGTTCAGTCTaGAGACAGTGTCTGCTTTTTGACTACATGGGCCTG +
Preference number: 3 (lower is better)
Translates to: FLCLQGKWPSSV*RQCLLFDYMGL
Trigger: CAGGCCCATGTAGTCAAAAAGCAGACACTGTCTTCAGACTGAACTGGGCCACTTACCTTGCAAGCACAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR GCA 72 bp TTAATGCAACTCCAGAGAAAATGGATGCTTCCGTACTaGTGTGATGGTGCCTTCAGGAATCTGAGGGCACCA +
Preference number: 3 (lower is better)
Translates to: LMQLQRKWMLPY*CDGAFRNLRAP
Trigger: TGGTGCCCTCAGATTCCTGAAGGCACCATCACAGCAGTACGGAAGCATCCATTTTCTCTGGAGTTGCATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434918.6
ENST00000678566.1
3UTR GCA 72 bp CCTCCTGAGCCACTGCAAAGAAATTCTTTCTTGTGTTaGCCATGTCACATCACACAAGTAGTGATCCCACGG +
Preference number: 3 (lower is better)
Translates to: PPEPLQRNSFLC*PCHITQVVIPR
Trigger: CCGTGGGATCACTACTTGTGTGATGTGACATGGGCAACACAAGAAAGAATTTCTTTGCAGTGGCTCAGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434918.6
ENST00000678566.1
3UTR CCA 72 bp GAAACTCAGAGTGATAAATGGGCAAGGATGCAATGGTaGTGCAGTTGGCACTCTCCTGAGGCTAGAAACTTC +
Preference number: 3 (lower is better)
Translates to: ETQSDKWARMQW*CSWHSPEARNF
Trigger: GAAGTTTCTAGCCTCAGGAGAGTGCCAACTGCACCACCATTGCATCCTTGCCCATTTATCACTCTGAGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416189.6
3UTR CCA 72 bp GCCTTCCTGATGTACTTAATGCAACTCCAGAGAAAATaGATGCTTCCGTACTGCTGTGATGGTGCCTTCAGG +
Preference number: 3 (lower is better)
Translates to: AFLMYLMQLQRK*MLPYCCDGAFR
Trigger: CCTGAAGGCACCATCACAGCAGTACGGAAGCATCCATTTTCTCTGGAGTTGCATTAAGTACATCAGGAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434918.6
ENST00000678566.1
3UTR-3UTR CAA 90 bp CTGGTTAGAGCTTCTATCCCGATGACTTCCCAGGTGCCTTTTGTAATAAATGTGAGTAGCCTGCTCGTGTaGGTATGCTTGGACTTGGGT +
Preference number: 3 (lower is better)
Translates to: LVRASIPMTSQVPFVINVSSLLV*VCLDLG
Trigger: ACCCAAGTCCAAGCATACCAACACGAGCAGGCTACT...CACATTTATTACAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTCTAACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp GCACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTTCCCTTACATTTCTTaGGAGTCTTTTCAACTGCTG +
Preference number: 3 (lower is better)
Translates to: APGGLRCWQFPLHFFGVFFPYIS*ESFQLL
Trigger: CAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAA...AAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp CTGCTAGCTATTCCATGGTCTTCATCAGTATACCACATTGCCTGGAAATCCACTTCACAGCTCCTGCCTTaGGATATGGAACCCGTACAG +
Preference number: 3 (lower is better)
Translates to: LLAIPWSSSVYHIAWKSTSQLLP*DMEPVQ
Trigger: CTGTACGGGTTCCATATCCAAAGGCAGGAGCTGTGA...AGTGGATTTCCAGGCAATGTGGTATACTGATGAAGACCATGGAATAGCTAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp GGAGACCCATGTAACGTTCTGTGTACACTGAGTCATAGTACTCCCACCGGGATACAAAGAACTTTACAGTaGGATTCACAGCTCCTGCCT +
Preference number: 3 (lower is better)
Translates to: GDPCNVLCTLSHSTPTGIQRTLQ*DSQLLP
Trigger: AGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTTG...TATCCCGGTGGGAGTACTATGACTCAGTGTACACAGAACGTTACATGGGTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp GGAGACCCATGTAACGTTCTGTGTACACTGAGTCATAGTACTCCCACCGGGATAAGCAGGAGCAGTGATTaGTATGGAAGTTGCATTGGT +
Preference number: 3 (lower is better)
Translates to: GDPCNVLCTLSHSTPTGISRSSD*YGSCIG
Trigger: ACCAATGCAACTTCCATACAAATCACTGCTCCTGCT...TATCCCGGTGGGAGTACTATGACTCAGTGTACACAGAACGTTACATGGGTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp GCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCTCTGGCTGCTTCAATTaGATCTTCAACTTCAAATGT +
Preference number: 3 (lower is better)
Translates to: ARVGMLGLGFPAMPCYLLSGCFN*IFNFKC
Trigger: ACATTTGAAGTTGAAGATCAAATTGAAGCAGCCAGA...GAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp CTGCTAGCTATTCCATGGTCTTCATCAGTATACCACATTGCCTGGAAATCCACTACGGCTATTCCACACTaGAACACGCCACTTCCCGAT +
Preference number: 3 (lower is better)
Translates to: LLAIPWSSSVYHIAWKSTTAIPH*NTPLPD
Trigger: ATCGGGAAGTGGCGTGTTCAAGTGTGGAATAGCCGT...AGTGGATTTCCAGGCAATGTGGTATACTGATGAAGACCATGGAATAGCTAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp ACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCGCAGTATCTAATAGCTaGTTCGTTCAAGCCAGAAAG +
Preference number: 3 (lower is better)
Translates to: TWGPALLAVSLTFLWSLFAVSNS*FVQARK
Trigger: CTTTCTGGCTTGAACGAACAAGCTATTAGATACTGC...GAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678566.1
3UTR-3UTR CAA 90 bp ACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCTTCCCTTACATTTCTTaGGAGTCTTTTCAACTGCTG +
Preference number: 3 (lower is better)
Translates to: TWGPALLAVSLTFLWSLFFPYIS*ESFQLL
Trigger: CAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAA...GAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp ACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCCAAAGAAATTCTTTCTaGTGTTGCCCATGTCACATC +
Preference number: 3 (lower is better)
Translates to: TWGPALLAVSLTFLWSLFQRNSF*CCPCHI
Trigger: GATGTGACATGGGCAACACAAGAAAGAATTTCTTTG...GAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp CAGTGCCGACTCCACAGCATCTCTGAGGAGCTTTTCCTTCAGTCCCCAAGAAGACAAATTGCAATTCGTTaGTTGTCCACAAATCCCATT +
Preference number: 3 (lower is better)
Translates to: QCRLHSISEELFLQSPRRQIAIR*LSTNPI
Trigger: AATGGGATTTGTGGACAACAAACGAATTGCAATTTG...TCTTCTTGGGGACTGAAGGAAAAGCTCCTCAGAGATGCTGTGGAGTCGGCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416189.6
3UTR-3UTR CAA 90 bp TTGAATTTCTGTAATGGTCAAGGTTGTCTTCTGGAGTTGGGAGACCCATGTAACACGGCTATTCCACACTaGAACACGCCACTTCCCGAT +
Preference number: 3 (lower is better)
Translates to: LNFCNGQGCLLELGDPCNTAIPH*NTPLPD
Trigger: ATCGGGAAGTGGCGTGTTCAAGTGTGGAATAGCCGT...GTTACATGGGTCTCCCAACTCCAGAAGACAACCTTGACCATTACAGAAATTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp TTTGGAATGATCAAAGTGCCAGAAGGGTCCCTAGTACTTATGCTAGCACTTCCAGGTTGTCTTCTGGAGTaGGGAGACCCATGTAACGTT +
Preference number: 3 (lower is better)
Translates to: FGMIKVPEGSLVLMLALPGCLLE*GDPCNV
Trigger: AACGTTACATGGGTCTCCCAACTCCAGAAGACAACC...TGGAAGTGCTAGCATAAGTACTAGGGACCCTTCTGGCACTTTGATCATTCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494507.2
3UTR CCA 72 bp TTCAGTCCCCAAGAAGAACCATCTGTAGCTGCTCGTTaGATCATGCTGGTTCCTCAGTTACCTTCCAACAAA +
Preference number: 3 (lower is better)
Translates to: FSPQEEPSVAAR*IMLVPQLPSNK
Trigger: TTTGTTGGAAGGTAACTGAGGAACCAGCATGATCCAACGAGCAGCTACAGATGGTTCTTCTTGGGGACTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416189.6
3UTR CCA 72 bp CTGCCCACTGGTTCTTCCATCAGGCAACCAGCCTGTTaGATGCTATTCAGTGATTTAGGTTTAGGGCTTTTT +
Preference number: 3 (lower is better)
Translates to: LPTGSSIRQPAC*MLFSDLGLGLF
Trigger: AAAAAGCCCTAAACCTAAATCACTGAATAGCATCCAACAGGCTGGTTGCCTGATGGAAGAACCAGTGGGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494507.2
3UTR-3UTR CAA 90 bp TATAGAGGGGCAGACCAGGACCGGAACATCTCAGCTGATAATACTTCGCCTCTTAACAATTCCTATTTGTaGTTTCAGCAGCTGATGCAG +
Preference number: 3 (lower is better)
Translates to: YRGADQDRNISADNTSPLNNSYL*FQQLMQ
Trigger: CTGCATCAGCTGCTGAAACAACAAATAGGAATTGTT...AAGAGGCGAAGTATTATCAGCTGAGATGTTCCGGTCCTGGTCTGCCCCTCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp CATATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGAGTAGCCTGCTCGTGTaGGTATGCTTGGACTTGGGT +
Preference number: 3 (lower is better)
Translates to: HMTSPKLQFVCCPQIPFLSSLLV*VCLDLG
Trigger: ACCCAAGTCCAAGCATACCAACACGAGCAGGCTACT...CAAAAATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp TATAGAGGGGCAGACCAGGACCGGAACATCTCAGCTGATAATACTTCGCCTCTTTTCCCTTACATTTCTTaGGAGTCTTTTCAACTGCTG +
Preference number: 3 (lower is better)
Translates to: YRGADQDRNISADNTSPLFPYIS*ESFQLL
Trigger: CAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAA...AAGAGGCGAAGTATTATCAGCTGAGATGTTCCGGTCCTGGTCTGCCCCTCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp CCTCCATATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTGTGACCCACTGTGTGTaGTTTGGAATCCTCTCTTCT +
Preference number: 3 (lower is better)
Translates to: PPYDQPQIAIRLLSTNPIVTHCV*FGILSS
Trigger: AGAAGAGAGGATTCCAAACAACACACAGTGGGTCAC...AATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATATGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416189.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp TATAGAGGGGCAGACCAGGACCGGAACATCTCAGCTGATAATACTTCGCCTCTTCAAAGAAATTCTTTCTaGTGTTGCCCATGTCACATC +
Preference number: 3 (lower is better)
Translates to: YRGADQDRNISADNTSPLQRNSF*CCPCHI
Trigger: GATGTGACATGGGCAACACAAGAAAGAATTTCTTTG...AAGAGGCGAAGTATTATCAGCTGAGATGTTCCGGTCCTGGTCTGCCCCTCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp GTGGGTATATATATGTTGGTGTGCTGTGCTGCTAGCTATTCCATGGTCTTCATCGACAGTGTCTGCTTTTaGACTACATGGGCCTGCATA +
Preference number: 3 (lower is better)
Translates to: VGIYMLVCCAASYSMVFIDSVCF*TTWACI
Trigger: TATGCAGGCCCATGTAGTCAAAAAGCAGACACTGTC...GATGAAGACCATGGAATAGCTAGCAGCACAGCACACCAACATATATATACCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp GATCCCAGGACCATTGAGGTTACGTACCCTCCATATGACCAGCCCCAAATTGCATCTGGCTGCTTCAATTaGATCTTCAACTTCAAATGT +
Preference number: 3 (lower is better)
Translates to: DPRTIEVTYPPYDQPQIASGCFN*IFNFKC
Trigger: ACATTTGAAGTTGAAGATCAAATTGAAGCAGCCAGA...TGCAATTTGGGGCTGGTCATATGGAGGGTACGTAACCTCAATGGTCCTGGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR GCA 72 bp CCTCCTGAGCCACTGCAAAGAAATTCTTTCTTGTGTTaGCCATGTCACATCACACAAGTAGTGATCCCCTAT +
Preference number: 3 (lower is better)
Translates to: PPEPLQRNSFLC*PCHITQVVIPY
Trigger: ATAGGGGATCACTACTTGTGTGATGTGACATGGGCAACACAAGAAAGAATTTCTTTGCAGTGGCTCAGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416189.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp AGGACCATTGAGGTTACGTACCCTCCATATGACCAGCCCCAAATTGCAATTCGTAACAATTCCTATTTGTaGTTTCAGCAGCTGATGCAG +
Preference number: 3 (lower is better)
Translates to: RTIEVTYPPYDQPQIAIRNNSYL*FQQLMQ
Trigger: CTGCATCAGCTGCTGAAACAACAAATAGGAATTGTT...ACGAATTGCAATTTGGGGCTGGTCATATGGAGGGTACGTAACCTCAATGGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp TATTTTCATCTTTTAACAGGGCAAGCTGATGTGTTCACATCTCAGTTTCAAGCTCTCGTGTTGGTATGCTaGGACTTGGGTTCCCAGCCA +
Preference number: 3 (lower is better)
Translates to: YFHLLTGQADVFTSQFQALVLVC*DLGSQP
Trigger: TGGCTGGGAACCCAAGTCCAAGCATACCAACACGAG...AGCTTGAAACTGAGATGTGAACACATCAGCTTGCCCTGTTAAAAGATGAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp CTTGCCATCCCTTTAAAGAAGAGAACAACATTTGAACCAGTCCAGTTAGAAAAACTCGTGTTGGTATGCTaGGACTTGGGTTCCCAGCCA +
Preference number: 3 (lower is better)
Translates to: LAIPLKKRTTFEPVQLEKLVLVC*DLGSQP
Trigger: TGGCTGGGAACCCAAGTCCAAGCATACCAACACGAG...TTTTTCTAACTGGACTGGTTCAAATGTTGTTCTCTTCTTTAAAGGGATGGCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp TTGAATTTCTGTAATGGTCAAGGTTGTCTTCTGGAGTTGGGAGACCCATGTAACGTGACCCACTGTGTGTaGTTTGGAATCCTCTCTTCT +
Preference number: 3 (lower is better)
Translates to: LNFCNGQGCLLELGDPCNVTHCV*FGILSS
Trigger: AGAAGAGAGGATTCCAAACAACACACAGTGGGTCAC...GTTACATGGGTCTCCCAACTCCAGAAGACAACCTTGACCATTACAGAAATTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp CAGTGTCTGCTTTTTGACTACATGGGCCTGCATACACATCTAATAGTAGAGGATGTGACCCACTGTGTGTaGTTTGGAATCCTCTCTTCT +
Preference number: 3 (lower is better)
Translates to: QCLLFDYMGLHTHLIVEDVTHCV*FGILSS
Trigger: AGAAGAGAGGATTCCAAACAACACACAGTGGGTCAC...ATCCTCTACTATTAGATGTGTATGCAGGCCCATGTAGTCAAAAAGCAGACACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000416189.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp AATATCCATGACCGAATAGTTCTGAATCCTCCTGAGCCACTGCAAAGAAATTCTGAACCCGTACAGTCTTaGGGTACTGCAGTGACTCAT +
Preference number: 3 (lower is better)
Translates to: NIHDRIVLNPPEPLQRNSEPVQS*GTAVTH
Trigger: ATGAGTCACTGCAGTACCCAAAGACTGTACGGGTTC...AGAATTTCTTTGCAGTGGCTCAGGAGGATTCAGAACTATTCGGTCATGGATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp GTTAGAGCTTCTATCCCGATGACTTCCCAGGTGCCTTTTGTAATAAATGTGCAGAGCAGGAGCAGTGATTaGTATGGAAGTTGCATTGGT +
Preference number: 3 (lower is better)
Translates to: VRASIPMTSQVPFVINVQSRSSD*YGSCIG
Trigger: ACCAATGCAACTTCCATACAAATCACTGCTCCTGCT...CTGCACATTTATTACAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTCTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp AGGACCATTGAGGTTACGTACCCTCCATATGACCAGCCCCAAATTGCAATTCGTCAAAGAAATTCTTTCTaGTGTTGCCCATGTCACATC +
Preference number: 3 (lower is better)
Translates to: RTIEVTYPPYDQPQIAIRQRNSF*CCPCHI
Trigger: GATGTGACATGGGCAACACAAGAAAGAATTTCTTTG...ACGAATTGCAATTTGGGGCTGGTCATATGGAGGGTACGTAACCTCAATGGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp GGAGACCCATGTAACGTTCTGTGTACACTGAGTCATAGTACTCCCACCGGGATATCTGGCTGCTTCAATTaGATCTTCAACTTCAAATGT +
Preference number: 3 (lower is better)
Translates to: GDPCNVLCTLSHSTPTGISGCFN*IFNFKC
Trigger: ACATTTGAAGTTGAAGATCAAATTGAAGCAGCCAGA...TATCCCGGTGGGAGTACTATGACTCAGTGTACACAGAACGTTACATGGGTCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp GTGGGTATATATATGTTGGTGTGCTGTGCTGCTAGCTATTCCATGGTCTTCATCATGACCAGCCCCAAATaGCAATTCGTTTGTTGTCCA +
Preference number: 3 (lower is better)
Translates to: VGIYMLVCCAASYSMVFIMTSPK*QFVCCP
Trigger: TGGACAACAAACGAATTGCAATTTGGGGCTGGTCAT...GATGAAGACCATGGAATAGCTAGCAGCACAGCACACCAACATATATATACCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp AGGACCATTGAGGTTACGTACCCTCCATATGACCAGCCCCAAATTGCAATTCGTGCCAGAAAGTCAGGTTaGAATATAGATTCGTACTTG +
Preference number: 3 (lower is better)
Translates to: RTIEVTYPPYDQPQIAIRARKSG*NIDSYL
Trigger: CAAGTACGAATCTATATTCAAACCTGACTTTCTGGC...ACGAATTGCAATTTGGGGCTGGTCATATGGAGGGTACGTAACCTCAATGGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434918.6
ENST00000678566.1
3UTR TCA 72 bp AAACATATGCCAATTTATGACCCACTGGTGACCATGTaGCCCACTGTGTGTTGTTTGGAATCCTCTCTTCTG +
Preference number: 3 (lower is better)
Translates to: KHMPIYDPLVTM*PTVCCLESSLL
Trigger: CAGAAGAGAGGATTCCAAACAACACACAGTGGGTCACATGGTCACCAGTGGGTCATAAATTGGCATATGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416189.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR TCA 72 bp TGGATATGGAACCCGTACAGTCTTTGGGTACTGCAGTaGCTCATCAGAGTAGAAGGAGTATTCAATAAGTGG +
Preference number: 3 (lower is better)
Translates to: WIWNPYSLWVLQ*LIRVEGVFNKW
Trigger: CCACTTATTGAATACTCCTTCTACTCTGATGAGTCACTGCAGTACCCAAAGACTGTACGGGTTCCATATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR GCA 72 bp GCCATCAAAGCTAGCTACTATAATGTTTTCTGTGCTTaGAAGGTAAGTGGCCCAGTTCAGTCTGAAGACAGT +
Preference number: 3 (lower is better)
Translates to: AIKASYYNVFCA*KVSGPVQSEDS
Trigger: ACTGTCTTCAGACTGAACTGGGCCACTTACCTTGCAAGCACAGAAAACATTATAGTAGCTAGCTTTGATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR GCA 72 bp ACCCCAAACTCGCTAATATTATTGAGCATTACTCTGTaGATGGCTGAAGGATACCACTCTTCTGACTTCACG +
Preference number: 3 (lower is better)
Translates to: TPNSLILLSITL*MAEGYHSSDFT
Trigger: CGTGAAGTCAGAAGAGTGGTATCCTTCAGCCATGCACAGAGTAATGCTCAATAATATTAGCGAGTTTGGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676768.1
3UTR CCA 72 bp CCAAATTTGACTCAAAGGGCGCTTACACAGCATGCATaGGAAGGAATGATTATCCCATTAAGCCCACTTGTT +
Preference number: 3 (lower is better)
Translates to: PNLTQRALTQHA*EGMIIPLSPLV
Trigger: AACAAGTGGGCTTAATGGGATAATCATTCCTTCCCATGCATGCTGTGTAAGCGCCCTTTGAGTCAAATTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676768.1
3UTR-3UTR CAA 90 bp TCAGGGAATCTATGCAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAGTAGCCTGCTCGTGTaGGTATGCTTGGACTTGGGT +
Preference number: 3 (lower is better)
Translates to: SGNLCKASIKTIPICCFSSSLLV*VCLDLG
Trigger: ACCCAAGTCCAAGCATACCAACACGAGCAGGCTACT...GCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTGCATAGATTCCCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp TTGAAAATTGTCTGGCTGCTTCAATTTGATCTTCAACTTCAAATGTTCCCAGTCTCACAGCTCCTGCCTTaGGATATGGAACCCGTACAG +
Preference number: 3 (lower is better)
Translates to: LKIVWLLQFDLQLQMFPVSQLLP*DMEPVQ
Trigger: CTGTACGGGTTCCATATCCAAAGGCAGGAGCTGTGA...GACTGGGAACATTTGAAGTTGAAGATCAAATTGAAGCAGCCAGACAATTTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp TTGAATTTCTGTAATGGTCAAGGTTGTCTTCTGGAGTTGGGAGACCCATGTAACCAAAGAACTTTACAGTaGGATTCACAGCTCCTGCCT +
Preference number: 3 (lower is better)
Translates to: LNFCNGQGCLLELGDPCNQRTLQ*DSQLLP
Trigger: AGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTTG...GTTACATGGGTCTCCCAACTCCAGAAGACAACCTTGACCATTACAGAAATTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR TCA 72 bp CGGAACATCTCAGCTGATAATACTTCGCCTCTTTACTaGATGACACAGAATAGTACTGACACCTTTCCGGAT +
Preference number: 3 (lower is better)
Translates to: RNISADNTSPLY*MTQNSTDTFPD
Trigger: ATCCGGAAAGGTGTCAGTACTATTCTGTGTCATTCAGTAAAGAGGCGAAGTATTATCAGCTGAGATGTTCCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR CCA 72 bp TATATATGTTGGTGTGCTGTGCTGCTAGCTATTCCATaGTCTTCATCAGTATACCACATTGCCTGGAAATCC +
Preference number: 3 (lower is better)
Translates to: YICWCAVLLAIP*SSSVYHIAWKS
Trigger: GGATTTCCAGGCAATGTGGTATACTGATGAAGACCATGGAATAGCTAGCAGCACAGCACACCAACATATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp TTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGAAAATTGTCTGGCTGCTTGAACCCGTACAGTCTTaGGGTACTGCAGTGACTCAT +
Preference number: 3 (lower is better)
Translates to: LQFVCCPQIPFLKIVWLLEPVQS*GTAVTH
Trigger: ATGAGTCACTGCAGTACCCAAAGACTGTACGGGTTC...AAGCAGCCAGACAATTTTCAAAAATGGGATTTGTGGACAACAAACGAATTGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp CTGGTTAGAGCTTCTATCCCGATGACTTCCCAGGTGCCTTTTGTAATAAATGTGCAAAGAAATTCTTTCTaGTGTTGCCCATGTCACATC +
Preference number: 3 (lower is better)
Translates to: LVRASIPMTSQVPFVINVQRNSF*CCPCHI
Trigger: GATGTGACATGGGCAACACAAGAAAGAATTTCTTTG...CACATTTATTACAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTCTAACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp GTTAGAGCTTCTATCCCGATGACTTCCCAGGTGCCTTTTGTAATAAATGTGCAGCAAAGAAATTCTTTCTaGTGTTGCCCATGTCACATC +
Preference number: 3 (lower is better)
Translates to: VRASIPMTSQVPFVINVQQRNSF*CCPCHI
Trigger: GATGTGACATGGGCAACACAAGAAAGAATTTCTTTG...CTGCACATTTATTACAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp TATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGAAGACAGTGTCTGCTTTTaGACTACATGGGCCTGCATA +
Preference number: 3 (lower is better)
Translates to: YDQPQIAIRLLSTNPIFEDSVCF*TTWACI
Trigger: TATGCAGGCCCATGTAGTCAAAAAGCAGACACTGTC...TTCAAAAATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp CAGTGTCTGCTTTTTGACTACATGGGCCTGCATACACATCTAATAGTAGAGGATGCAGTATCTAATAGCTaGTTCGTTCAAGCCAGAAAG +
Preference number: 3 (lower is better)
Translates to: QCLLFDYMGLHTHLIVEDAVSNS*FVQARK
Trigger: CTTTCTGGCTTGAACGAACAAGCTATTAGATACTGC...ATCCTCTACTATTAGATGTGTATGCAGGCCCATGTAGTCAAAAAGCAGACACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434918.6
ENST00000678566.1
3UTR-3UTR CAA 90 bp TGTCTTCCAGGACTCTCAGCCCTTTATCATTCACGCTGCTGTGTAGAGTATAGAAGAGAAAGATCCACTTaGCCATATGAAATGTACTGT +
Preference number: 3 (lower is better)
Translates to: CLPGLSALYHSRCCVEYRRERST*PYEMYC
Trigger: ACAGTACATTTCATATGGCAAAGTGGATCTTTCTCT...TCTATACTCTACACAGCAGCGTGAATGATAAAGGGCTGAGAGTCCTGGAAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676479.1
3UTR TCA 72 bp ACATCTCAGCTGATAATACTTCGCCTCTTTACTGAATaGCACAGAATAGTACTGACACCTTTCCGGATTCAG +
Preference number: 3 (lower is better)
Translates to: TSQLIILRLFTE*HRIVLTPFRIQ
Trigger: CTGAATCCGGAAAGGTGTCAGTACTATTCTGTGTCATTCAGTAAAGAGGCGAAGTATTATCAGCTGAGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp GACTACATGGGCCTGCATACACATCTAATAGTAGAGGATATTTCTTGGATTTATGTGACCCACTGTGTGTaGTTTGGAATCCTCTCTTCT +
Preference number: 3 (lower is better)
Translates to: DYMGLHTHLIVEDISWIYVTHCV*FGILSS
Trigger: AGAAGAGAGGATTCCAAACAACACACAGTGGGTCAC...ATAAATCCAAGAAATATCCTCTACTATTAGATGTGTATGCAGGCCCATGTAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416189.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp ATAAATTCTGTAATGGTCAAGGTTGTCTTCTGGAGTTGGGAGACCCATGTAACGAAATTCTTTCTTGTGTaGCCCATGTCACATCACACA +
Preference number: 3 (lower is better)
Translates to: INSVMVKVVFWSWETHVTKFFLV*PMSHHT
Trigger: TGTGTGATGTGACATGGGCAACACAAGAAAGAATTT...CGTTACATGGGTCTCCCAACTCCAGAAGACAACCTTGACCATTACAGAATTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416189.6
3UTR-3UTR CAA 90 bp TATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGAAATGACCAGCCCCAAATaGCAATTCGTTTGTTGTCCA +
Preference number: 3 (lower is better)
Translates to: YDQPQIAIRLLSTNPIFEMTSPK*QFVCCP
Trigger: TGGACAACAAACGAATTGCAATTTGGGGCTGGTCAT...TTCAAAAATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp TTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACTGCTGTGGTTTTAACAATTCCTATTTGTaGTTTCAGCAGCTGATGCAG +
Preference number: 3 (lower is better)
Translates to: LLAVSLTFLWSLFNCCGFNNSYL*FQQLMQ
Trigger: CTGCATCAGCTGCTGAAACAACAAATAGGAATTGTT...AAAACCACAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp TTGAAAATTGTCTGGCTGCTTCAATTTGATCTTCAACTTCAAATGTTCCCAGTCAGCAGGAGCAGTGATTaGTATGGAAGTTGCATTGGT +
Preference number: 3 (lower is better)
Translates to: LKIVWLLQFDLQLQMFPVSRSSD*YGSCIG
Trigger: ACCAATGCAACTTCCATACAAATCACTGCTCCTGCT...GACTGGGAACATTTGAAGTTGAAGATCAAATTGAAGCAGCCAGACAATTTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp GACTACATGGGCCTGCATACACATCTAATAGTAGAGGATATTTCTTGGATTTATTTATCCAAAGCTGAATaGTCTTCCAGGACTCTCAGC +
Preference number: 3 (lower is better)
Translates to: DYMGLHTHLIVEDISWIYLSKAE*SSRTLS
Trigger: GCTGAGAGTCCTGGAAGACAATTCAGCTTTGGATAA...ATAAATCCAAGAAATATCCTCTACTATTAGATGTGTATGCAGGCCCATGTAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp TTGAAAATTGTCTGGCTGCTTCAATTTGATCTTCAACTTCAAATGTTCCCAGTCATGAAGTCCAGTTTTTaGGAGGGCATCTGGACATTC +
Preference number: 3 (lower is better)
Translates to: LKIVWLLQFDLQLQMFPVMKSSF*EGIWTF
Trigger: GAATGTCCAGATGCCCTCCAAAAAACTGGACTTCAT...GACTGGGAACATTTGAAGTTGAAGATCAAATTGAAGCAGCCAGACAATTTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp AACTTCAAATGTTCCCAGTCTTCTGTTGATTGCATGCATGATCTTATCTCCTTGAAATTCTTTCTTGTGTaGCCCATGTCACATCACACA +
Preference number: 3 (lower is better)
Translates to: NFKCSQSSVDCMHDLISLKFFLV*PMSHHT
Trigger: TGTGTGATGTGACATGGGCAACACAAGAAAGAATTT...CAAGGAGATAAGATCATGCATGCAATCAACAGAAGACTGGGAACATTTGAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp CTTGCCATCCCTTTAAAGAAGAGAACAACATTTGAACCAGTCCAGTTAGAAAAAAAATTCTTTCTTGTGTaGCCCATGTCACATCACACA +
Preference number: 3 (lower is better)
Translates to: LAIPLKKRTTFEPVQLEKKFFLV*PMSHHT
Trigger: TGTGTGATGTGACATGGGCAACACAAGAAAGAATTT...TTTTTCTAACTGGACTGGTTCAAATGTTGTTCTCTTCTTTAAAGGGATGGCAAG
38% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp CTTGCCATCCCTTTAAAGAAGAGAACAACATTTGAACCAGTCCAGTTAGAAAAACAAAGAAATTCTTTCTaGTGTTGCCCATGTCACATC +
Preference number: 3 (lower is better)
Translates to: LAIPLKKRTTFEPVQLEKQRNSF*CCPCHI
Trigger: GATGTGACATGGGCAACACAAGAAAGAATTTCTTTG...TTTTTCTAACTGGACTGGTTCAAATGTTGTTCTCTTCTTTAAAGGGATGGCAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR-3UTR CAA 90 bp TTGAAAATTGTCTGGCTGCTTCAATTTGATCTTCAACTTCAAATGTTCCCAGTCGCCAGAAAGTCAGGTTaGAATATAGATTCGTACTTG +
Preference number: 3 (lower is better)
Translates to: LKIVWLLQFDLQLQMFPVARKSG*NIDSYL
Trigger: CAAGTACGAATCTATATTCAAACCTGACTTTCTGGC...GACTGGGAACATTTGAAGTTGAAGATCAAATTGAAGCAGCCAGACAATTTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434918.6
ENST00000678566.1
CDS-3UTR GCA 90 bp AGTCTGGCTGTGAACAGCTCTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGCGCGTCCTGCACCGCTaGTCCGGGCGGTGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: SLAVNSSSPRGADSSLLVRVLHR*SGRWSH
Trigger: GTGACTCCACCGCCCGGAGCAGCGGTGCAGGACGCG...CACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAGAGCTGTTCACAGCCAGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360534.8
ENST00000676810.1
ENST00000678566.1
CDS-3UTR GCA 90 bp GAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATCGGAGACGCGCGTCCTaGACCGCTGCTCCGGGCGGT +
Preference number: 4 (lower is better)
Translates to: ELTVACSCWYAWTWVPSHRRRAS*TAAPGG
Trigger: ACCGCCCGGAGCAGCGGTGCAGGACGCGCGTCTCCG...ATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360534.8
ENST00000676810.1
ENST00000678566.1
CDS-3UTR GCA 90 bp GCAGTTGGCACTCTCCTGAGGCTAGAAACTTCCGGAGAGCCCCGCTGCCAGCAATCCGGAGAGCCCCGCTaGCAGCAACAGCCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: AVGTLLRLETSGEPRCQQSGEPR*QQQPGK
Trigger: CTTGCCAGGCTGTTGCTGGCAGCGGGGCTCTCCGGA...TTGCTGGCAGCGGGGCTCTCCGGAAGTTTCTAGCCTCAGGAGAGTGCCAACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416189.6
CDS-3UTR GCA 90 bp CTCTCAGCCCTTTATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGACCAGCGCGTCCTGCACCGCTaGTCCGGGCGGTGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: LSALYHSRCCVEYRGADQRVLHR*SGRWSH
Trigger: GTGACTCCACCGCCCGGAGCAGCGGTGCAGGACGCG...CTGGTCTGCCCCTCTATACTCTACACAGCAGCGTGAATGATAAAGGGCTGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434918.6
ENST00000678566.1
CDS-3UTR GCA 90 bp TATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGACCAGGACCGGAACATCCGCGTCCTGCACCGCTaGTCCGGGCGGTGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: YHSRCCVEYRGADQDRNIRVLHR*SGRWSH
Trigger: GTGACTCCACCGCCCGGAGCAGCGGTGCAGGACGCG...GATGTTCCGGTCCTGGTCTGCCCCTCTATACTCTACACAGCAGCGTGAATGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434918.6
ENST00000678566.1
CDS-3UTR CCA 90 bp CTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCGGAGTCACTCGCCGCTaGCAAGTTTCGGCCCCGAGT +
Preference number: 4 (lower is better)
Translates to: LTVACSCWYAWTWVPSHAGVTRR*QVSAPS
Trigger: ACTCGGGGCCGAAACTTGCCAGCGGCGAGTGACTCC...GGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360534.8
ENST00000676810.1
ENST00000678566.1
CDS-3UTR CCA 90 bp AGCTCTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACGCCATAACTGGCACCTaGGGGCCTGCGTTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: SSSPRGADSSLLVLVCLDAITGT*GPALLA
Trigger: TGCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGC...GTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp GAGCCCCGCTGCCAGCAACAGCCTGGCAAGGAGAAGTGGGAAGGATCGGTCCAGCAATGGTGGTGCAGTTaGCACTCTCCTGAGGCTAGA +
Preference number: 4 (lower is better)
Translates to: EPRCQQQPGKEKWEGSVQQWWCS*HSPEAR
Trigger: TCTAGCCTCAGGAGAGTGCCAACTGCACCACCATTG...CTGGACCGATCCTTCCCACTTCTCCTTGCCAGGCTGTTGCTGGCAGCGGGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416189.6
3UTR CAA 72 bp TCCCACCGGGATACAGGCGCCACGGCTATTCCACACTaGAACACGCCACTTCCCGATCCCAGGACCATTGAG +
Preference number: 4 (lower is better)
Translates to: SHRDTGATAIPH*NTPLPDPRTIE
Trigger: CTCAATGGTCCTGGGATCGGGAAGTGGCGTGTTCAAGTGTGGAATAGCCGTGGCGCCTGTATCCCGGTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTGCCAGTCTGGCTGTaGACAGCTCTTCTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: LLRGELTVACSCWYAWTWVPVWL*TALLRG
Trigger: CCCTCGGAGAAGAGCTGTTCACAGCCAGACTGGCAC...CCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp TTTGTAGCACCTATAGCCATAACTGGCACCTGGGGGCCTGCGTTGCTGGCAGTTGGAGTCACTCGCCGCTaGCAAGTTTCGGCCCCGAGT +
Preference number: 4 (lower is better)
Translates to: FVAPIAITGTWGPALLAVGVTRR*QVSAPS
Trigger: ACTCGGGGCCGAAACTTGCCAGCGGCGAGTGACTCC...AACTGCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGTGCTACAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360534.8
ENST00000676810.1
ENST00000678566.1
CDS-3UTR CCA 90 bp GAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCATAACTGGCACCTaGGGGCCTGCGTTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: ELTVACSCWYAWTWVPSHAITGT*GPALLA
Trigger: TGCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGC...ATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp TTCTCAGAAAACTGTGCCAGTCTGGCTGTGAACAGCTCTTCTCCGAGGGGAGCTCCCCGGGGACGTACGTaGCGCGGCACTCACCTTCAT +
Preference number: 4 (lower is better)
Translates to: FSENCASLAVNSSSPRGAPRGRT*RGTHLH
Trigger: ATGAAGGTGAGTGCCGCGCCACGTACGTCCCCGGGG...AGCTCCCCTCGGAGAAGAGCTGTTCACAGCCAGACTGGCACAGTTTTCTGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000676479.1
CDS-3UTR GCA 90 bp AGCTCTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACCCTGGGGGCCTGCGTTaGTGGCAGTTTCCCTTACAT +
Preference number: 4 (lower is better)
Translates to: SSSPRGADSSLLVLVCLDPGGLR*WQFPLH
Trigger: ATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGG...GTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp GGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCTCCCTAATCGCCATAACTGGCACCTaGGGGCCTGCGTTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: GMLGLGFPAMPCYLLSLIAITGT*GPALLA
Trigger: TGCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGC...GATTAGGGAGAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCTCCCTAGCGTCTCCTCGGAAGTaGGCGTTCAGAGAAGGAGCG +
Preference number: 4 (lower is better)
Translates to: VGMLGLGFPAMPCYLLSLASPRK*AFREGA
Trigger: CGCTCCTTCTCTGAACGCTCACTTCCGAGGAGACGC...TAGGGAGAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360534.8
ENST00000676810.1
ENST00000678566.1
CDS-3UTR TCA 90 bp GCACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTGTGCCAGTCTGGCTGTaGACAGCTCTTCTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: APGGLRCWQFPLHFFGVFVPVWL*TALLRG
Trigger: CCCTCGGAGAAGAGCTGTTCACAGCCAGACTGGCAC...AAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp AGTCTGGCTGTGAACAGCTCTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGCTCTTATCCTGTCCCTaGCCTAGTGACATCACTGCC +
Preference number: 4 (lower is better)
Translates to: SLAVNSSSPRGADSSLLVLLSCP*PSDITA
Trigger: GGCAGTGATGTCACTAGGGCAGGGACAGGATAAGAG...CACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAGAGCTGTTCACAGCCAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp CTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCTTGGGTTCCCAGCCATaGCCTGCTATCTTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: LTVACSCWYAWTWVPSHALGSQP*PAIFSP
Trigger: GGGAGAGAAGATAGCAGGGCATGGCTGGGAACCCAA...GGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp AGCTCTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATaGCCTGCTATCTTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: SSSPRGADSSLLVLVCLDLGSQP*PAIFSP
Trigger: GGGAGAGAAGATAGCAGGGCATGGCTGGGAACCCAA...GTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp AGTCTGGCTGTGAACAGCTCTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGGAGCTGACAGTAGCCTaGTCGTGTTGGTATGCTTGG +
Preference number: 4 (lower is better)
Translates to: SLAVNSSSPRGADSSLLVELTVA*SCWYAW
Trigger: CCAAGCATACCAACACGAGCAGGCTACTGTCAGCTC...CACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAGAGCTGTTCACAGCCAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp GCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCCCTGGGGGCCTGCGTTaGTGGCAGTTTCCCTTACAT +
Preference number: 4 (lower is better)
Translates to: ARVGMLGLGFPAMPCYLLPGGLR*WQFPLH
Trigger: ATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGG...GAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TGTTTTTGTAGCACCTATAGCCATAACTGGCACCTGGGGGCCTGCGTTGCTGGCCCTGGGGGCCTGCGTTaGTGGCAGTTTCCCTTACAT +
Preference number: 4 (lower is better)
Translates to: CFCSTYSHNWHLGACVAGPGGLR*WQFPLH
Trigger: ATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGG...GCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGTGCTACAAAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp CGGGATACAGGCGCCACGGCTATTCCACACTTGAACACGCCACTTCCCGATCCCATCTGCAGAGCAACCTaGCCACTGGTTCTTCCATCA +
Preference number: 4 (lower is better)
Translates to: RDTGATAIPHLNTPLPDPICRAT*PLVLPS
Trigger: TGATGGAAGAACCAGTGGGCAGGTTGCTCTGCAGAT...GGGATCGGGAAGTGGCGTGTTCAAGTGTGGAATAGCCGTGGCGCCTGTATCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494507.2
CDS-3UTR CCA 90 bp CTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCTGGTATGCTTGGACTTaGGTTCCCAGCCATGCCCTG +
Preference number: 4 (lower is better)
Translates to: LTVACSCWYAWTWVPSHAWYAWT*VPSHAL
Trigger: CAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCA...GGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp CGGGATACAGGCGCCACGGCTATTCCACACTTGAACACGCCACTTCCCGATCCCGTAGCCTGCTCGTGTTaGTATGCTTGGACTTGGGTT +
Preference number: 4 (lower is better)
Translates to: RDTGATAIPHLNTPLPDPVACSC*YAWTWV
Trigger: AACCCAAGTCCAAGCATACCAACACGAGCAGGCTAC...GGGATCGGGAAGTGGCGTGTTCAAGTGTGGAATAGCCGTGGCGCCTGTATCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CCA 90 bp CTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGACCTATAGCCATAACTaGCACCTGGGGGCCTGCGTT +
Preference number: 4 (lower is better)
Translates to: LLRGELTVACSCWYAWTWTYSHN*HLGACV
Trigger: AACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGT...CCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR CAA 72 bp GCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTaGGGTTCCCAGCCATGCCCTGCTATCTTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: ADSSLLVLVCLD*GSQPCPAIFSP
Trigger: GGGAGAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR CAA 72 bp AGGGGAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTaGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTC +
Preference number: 4 (lower is better)
Translates to: RGADSSLLVLVC*DLGSQPCPAIF
Trigger: GAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CTCTCAGCCCTTTATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGACCAGGCGTCTCCTCGGAAGTaGGCGTTCAGAGAAGGAGCG +
Preference number: 4 (lower is better)
Translates to: LSALYHSRCCVEYRGADQASPRK*AFREGA
Trigger: CGCTCCTTCTCTGAACGCTCACTTCCGAGGAGACGC...CTGGTCTGCCCCTCTATACTCTACACAGCAGCGTGAATGATAAAGGGCTGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434918.6
ENST00000678566.1
CDS-3UTR TCA 90 bp CTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCGATCCCAGGACCATTaGGGTTACGTACCCTCCATA +
Preference number: 4 (lower is better)
Translates to: LTVACSCWYAWTWVPSHARSQDH*GYVPSI
Trigger: TATGGAGGGTACGTAACCTCAATGGTCCTGGGATCG...GGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TGTTTTTGTAGCACCTATAGCCATAACTGGCACCTGGGGGCCTGCGTTGCTGGCCGGCTATTCCACACTTaGACACGCCACTTCCCGATC +
Preference number: 4 (lower is better)
Translates to: CFCSTYSHNWHLGACVAGRLFHT*TRHFPI
Trigger: GATCGGGAAGTGGCGTGTTCAAGTGTGGAATAGCCG...GCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGTGCTACAAAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGACCAGGACCGGAACATCGTGCCAGTCTGGCTGTaGACAGCTCTTCTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: YHSRCCVEYRGADQDRNIVPVWL*TALLRG
Trigger: CCCTCGGAGAAGAGCTGTTCACAGCCAGACTGGCAC...GATGTTCCGGTCCTGGTCTGCCCCTCTATACTCTACACAGCAGCGTGAATGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp CTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTCTTATCCTGTCCCTaGCCTAGTGACATCACTGCC +
Preference number: 4 (lower is better)
Translates to: LTVACSCWYAWTWVPSHALLSCP*PSDITA
Trigger: GGCAGTGATGTCACTAGGGCAGGGACAGGATAAGAG...GGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp GGCACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTGGGTTCCCAGCCATaGCCTGCTATCTTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: GTWGPALLAVSLTFLWSLLGSQP*PAIFSP
Trigger: GGGAGAGAAGATAGCAGGGCATGGCTGGGAACCCAA...AAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp GACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTCTGCTCGTGTTGGTATaGTTGGACTTGGGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: DSSLLVLVCLDLGSQPCPLLVLV*LDLGSQ
Trigger: CTGGGAACCCAAGTCCAAGCATACCAACACGAGCAG...AGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp GTGGGTATATATATGTTGGTGTGCTGTGCTGCTAGCTATTCCATGGTCTTCATCCGCTGCTCCGGGCGGTaGAGTCACTCGCCGCTGGCA +
Preference number: 4 (lower is better)
Translates to: VGIYMLVCCAASYSMVFIRCSGR*SHSPLA
Trigger: TGCCAGCGGCGAGTGACTCCACCGCCCGGAGCAGCG...GATGAAGACCATGGAATAGCTAGCAGCACAGCACACCAACATATATATACCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434918.6
ENST00000678566.1
CDS-3UTR CCA 90 bp CTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGCATCGACCAGGGCTTTaGAGATCTGAGCTGACTGCT +
Preference number: 4 (lower is better)
Translates to: LLRGELTVACSCWYAWTWHRPGL*RSELTA
Trigger: AGCAGTCAGCTCAGATCTCCAAAGCCCTGGTCGATG...CCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp GGCACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTGGTATGCTTGGACTTaGGTTCCCAGCCATGCCCTG +
Preference number: 4 (lower is better)
Translates to: GTWGPALLAVSLTFLWSLWYAWT*VPSHAL
Trigger: CAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCA...AAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp GCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCACCTATAGCCATAACTaGCACCTGGGGGCCTGCGTT +
Preference number: 4 (lower is better)
Translates to: ARVGMLGLGFPAMPCYLLTYSHN*HLGACV
Trigger: AACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGT...GAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp TTTGTAGCACCTATAGCCATAACTGGCACCTGGGGGCCTGCGTTGCTGGCAGTTACCTATAGCCATAACTaGCACCTGGGGGCCTGCGTT +
Preference number: 4 (lower is better)
Translates to: FVAPIAITGTWGPALLAVTYSHN*HLGACV
Trigger: AACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGT...AACTGCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGTGCTACAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp TTCTCAGAAAACTGTGCCAGTCTGGCTGTGAACAGCTCTTCTCCGAGGGGAGCTCCTAAGGGGAGTCCCTaGTCCGGTTTCGCCAGCTTT +
Preference number: 4 (lower is better)
Translates to: FSENCASLAVNSSSPRGAPKGSP*SGFASF
Trigger: AAAGCTGGCGAAACCGGACCAGGGACTCCCCTTAGG...AGCTCCCCTCGGAGAAGAGCTGTTCACAGCCAGACTGGCACAGTTTTCTGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676479.1
CDS-3UTR TCA 90 bp GAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATCCACTGGTGACCATGTaGCCCACTGTGTGTTGTTTG +
Preference number: 4 (lower is better)
Translates to: ELTVACSCWYAWTWVPSHPLVTM*PTVCCL
Trigger: CAAACAACACACAGTGGGTCACATGGTCACCAGTGG...ATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTTTTATGACCCACTGGTaGCCATGTGACCCACTGTGT +
Preference number: 4 (lower is better)
Translates to: DSSLLVLVCLDLGSQPCPFMTHW*PCDPLC
Trigger: ACACAGTGGGTCACATGGTCACCAGTGGGTCATAAA...AGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CGGGATACAGGCGCCACGGCTATTCCACACTTGAACACGCCACTTCCCGATCCCGAGCAGAGTAGGCACTaGAGACTTCCTCTTCATAAA +
Preference number: 4 (lower is better)
Translates to: RDTGATAIPHLNTPLPDPEQSRH*RLPLHK
Trigger: TTTATGAAGAGGAAGTCTTCAGTGCCTACTCTGCTC...GGGATCGGGAAGTGGCGTGTTCAAGTGTGGAATAGCCGTGGCGCCTGTATCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GGCACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTGAGCTTCTATCCCGATaGCTTCCCAGGTGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: GTWGPALLAVSLTFLWSLELLSR*LPRCLL
Trigger: CAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTC...AAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp ACACGCCACTTCCCGATCCCAGGACCATTGAGGTTACGTACCCTCCATATGACCCGATCCCAGGACCATTaGGGTTACGTACCCTCCATA +
Preference number: 4 (lower is better)
Translates to: TRHFPIPGPLRLRTLHMTRSQDH*GYVPSI
Trigger: TATGGAGGGTACGTAACCTCAATGGTCCTGGGATCG...GGTCATATGGAGGGTACGTAACCTCAATGGTCCTGGGATCGGGAAGTGGCGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATCGATCCCAGGACCATTaGGGTTACGTACCCTCCATA +
Preference number: 4 (lower is better)
Translates to: ELTVACSCWYAWTWVPSHRSQDH*GYVPSI
Trigger: TATGGAGGGTACGTAACCTCAATGGTCCTGGGATCG...ATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCTCCCTAATCCGGCTATTCCACACTTaGACACGCCACTTCCCGATC +
Preference number: 4 (lower is better)
Translates to: GMLGLGFPAMPCYLLSLIRLFHT*TRHFPI
Trigger: GATCGGGAAGTGGCGTGTTCAAGTGTGGAATAGCCG...GATTAGGGAGAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp GCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCCTCTTATCCTGTCCCTaGCCTAGTGACATCACTGCC +
Preference number: 4 (lower is better)
Translates to: ARVGMLGLGFPAMPCYLLLLSCP*PSDITA
Trigger: GGCAGTGATGTCACTAGGGCAGGGACAGGATAAGAG...GAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TTTGTAGCACCTATAGCCATAACTGGCACCTGGGGGCCTGCGTTGCTGGCAGTTCTGCTCGTGTTGGTATaGTTGGACTTGGGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: FVAPIAITGTWGPALLAVLLVLV*LDLGSQ
Trigger: CTGGGAACCCAAGTCCAAGCATACCAACACGAGCAG...AACTGCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGTGCTACAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp GCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCCTGCTCGTGTTGGTATaGTTGGACTTGGGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: ARVGMLGLGFPAMPCYLLLLVLV*LDLGSQ
Trigger: CTGGGAACCCAAGTCCAAGCATACCAACACGAGCAG...GAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TGTTTTTGTAGCACCTATAGCCATAACTGGCACCTGGGGGCCTGCGTTGCTGGCGAGCTGACAGTAGCCTaGTCGTGTTGGTATGCTTGG +
Preference number: 4 (lower is better)
Translates to: CFCSTYSHNWHLGACVAGELTVA*SCWYAW
Trigger: CCAAGCATACCAACACGAGCAGGCTACTGTCAGCTC...GCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGTGCTACAAAAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp ACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCCCTGGGGGCCTGCGTTaGTGGCAGTTTCCCTTACAT +
Preference number: 4 (lower is better)
Translates to: TWGPALLAVSLTFLWSLFPGGLR*WQFPLH
Trigger: ATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGG...GAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp GACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTCACAGCTCCTGCCTTTaGATATGGAACCCGTACAGT +
Preference number: 4 (lower is better)
Translates to: DSSLLVLVCLDLGSQPCPHSSCL*IWNPYS
Trigger: ACTGTACGGGTTCCATATCCAAAGGCAGGAGCTGTG...AGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp GAGCCCCGCTGCCAGCAACAGCCTGGCAAGGAGAAGTGGGAAGGATCGGTCCAGTTTTTGGAGGGCATCTaGACATTCTGCAGCATTTTA +
Preference number: 4 (lower is better)
Translates to: EPRCQQQPGKEKWEGSVQFLEGI*TFCSIL
Trigger: TAAAATGCTGCAGAATGTCCAGATGCCCTCCAAAAA...CTGGACCGATCCTTCCCACTTCTCCTTGCCAGGCTGTTGCTGGCAGCGGGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000416189.6
CDS-3UTR CCA 90 bp CTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCGTAGCCTGCTCGTGTTaGTATGCTTGGACTTGGGTT +
Preference number: 4 (lower is better)
Translates to: LTVACSCWYAWTWVPSHAVACSC*YAWTWV
Trigger: AACCCAAGTCCAAGCATACCAACACGAGCAGGCTAC...GGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp CTCCTGCCTTTGGATATGGAACCCGTACAGTCTTTGGGTACTGCAGTGACTCATGAAGGATCGGTCCAGTaGCAGTGCCGACTCCACAGC +
Preference number: 4 (lower is better)
Translates to: LLPLDMEPVQSLGTAVTHEGSVQ*QCRLHS
Trigger: GCTGTGGAGTCGGCACTGCCACTGGACCGATCCTTC...ATGAGTCACTGCAGTACCCAAAGACTGTACGGGTTCCATATCCAAAGGCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416189.6
CDS-3UTR TCA 90 bp GGCGCTTACACAGCATGCATGGGAAGGAATGATTATCCCATTAAGCCCACTTGTGCGTCTCCTCGGAAGTaGGCGTTCAGAGAAGGAGCG +
Preference number: 4 (lower is better)
Translates to: GAYTACMGRNDYPIKPTCASPRK*AFREGA
Trigger: CGCTCCTTCTCTGAACGCTCACTTCCGAGGAGACGC...ACAAGTGGGCTTAATGGGATAATCATTCCTTCCCATGCATGCTGTGTAAGCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR TCA 90 bp CCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTTTTATGACCCACTGGTaGCCATGTGACCCACTGTGT +
Preference number: 4 (lower is better)
Translates to: PARVGMLGLGFPAMPCYLFMTHW*PCDPLC
Trigger: ACACAGTGGGTCACATGGTCACCAGTGGGTCATAAA...AAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp AGTCTGGCTGTGAACAGCTCTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGGAGCAGAGTAGGCACTaGAGACTTCCTCTTCATAAA +
Preference number: 4 (lower is better)
Translates to: SLAVNSSSPRGADSSLLVEQSRH*RLPLHK
Trigger: TTTATGAAGAGGAAGTCTTCAGTGCCTACTCTGCTC...CACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAGAGCTGTTCACAGCCAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTTTGGGTACTGCAGTaGCTCATCAGAGTAGAAGGA +
Preference number: 4 (lower is better)
Translates to: LTVACSCWYAWTWVPSHALWVLQ*LIRVEG
Trigger: TCCTTCTACTCTGATGAGTCACTGCAGTACCCAAAG...GGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CGGGATACAGGCGCCACGGCTATTCCACACTTGAACACGCCACTTCCCGATCCCGGTAAAATGAGGTTCTaGAGGCCTAAATCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: RDTGATAIPHLNTPLPDPGKMRF*RPKSSN
Trigger: GTTGGAAGATTTAGGCCTTCAGAACCTCATTTTACC...GGGATCGGGAAGTGGCGTGTTCAAGTGTGGAATAGCCGTGGCGCCTGTATCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCTCCCTAATCGAGCTTCTATCCCGATaGCTTCCCAGGTGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: GMLGLGFPAMPCYLLSLIELLSR*LPRCLL
Trigger: CAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTC...GATTAGGGAGAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCTCCCTAGAGCTTCTATCCCGATaGCTTCCCAGGTGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: VGMLGLGFPAMPCYLLSLELLSR*LPRCLL
Trigger: CAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTC...TAGGGAGAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTACAGTGTCTGCTTTTTaGCTACATGGGCCTGCATAC +
Preference number: 4 (lower is better)
Translates to: DSSLLVLVCLDLGSQPCPTVSAF*LHGPAY
Trigger: GTATGCAGGCCCATGTAGTCAAAAAGCAGACACTGT...AGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp ACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCCGGCTATTCCACACTTaGACACGCCACTTCCCGATC +
Preference number: 4 (lower is better)
Translates to: TWGPALLAVSLTFLWSLFRLFHT*TRHFPI
Trigger: GATCGGGAAGTGGCGTGTTCAAGTGTGGAATAGCCG...GAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACTGCTGTGGTTTTCGCGTCCTGCACCGCTaGTCCGGGCGGTGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: LLAVSLTFLWSLFNCCGFRVLHR*SGRWSH
Trigger: GTGACTCCACCGCCCGGAGCAGCGGTGCAGGACGCG...AAAACCACAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360534.8
ENST00000676810.1
ENST00000678566.1
CDS-3UTR GCA 90 bp CGGGATACAGGCGCCACGGCTATTCCACACTTGAACACGCCACTTCCCGATCCCAATGTTTTCTGTGCTTaGAAGGTAAGTGGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: RDTGATAIPHLNTPLPDPNVFCA*KVSGPV
Trigger: AACTGGGCCACTTACCTTGCAAGCACAGAAAACATT...GGGATCGGGAAGTGGCGTGTTCAAGTGTGGAATAGCCGTGGCGCCTGTATCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp CGGGATACAGGCGCCACGGCTATTCCACACTTGAACACGCCACTTCCCGATCCCATCAGTATACCACATTaGCTGGAAATCCACTCCAAC +
Preference number: 4 (lower is better)
Translates to: RDTGATAIPHLNTPLPDPISIPH*LEIHSN
Trigger: GTTGGAGTGGATTTCCAGGCAATGTGGTATACTGAT...GGGATCGGGAAGTGGCGTGTTCAAGTGTGGAATAGCCGTGGCGCCTGTATCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp GCACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTCTCTTATCCTGTCCCTaGCCTAGTGACATCACTGCC +
Preference number: 4 (lower is better)
Translates to: APGGLRCWQFPLHFFGVFLLSCP*PSDITA
Trigger: GGCAGTGATGTCACTAGGGCAGGGACAGGATAAGAG...AAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp GGAGACCCATGTAACGTTCTGTGTACACTGAGTCATAGTACTCCCACCGGGATACCTGGGGGCCTGCGTTaGTGGCAGTTTCCCTTACAT +
Preference number: 4 (lower is better)
Translates to: GDPCNVLCTLSHSTPTGIPGGLR*WQFPLH
Trigger: ATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGG...TATCCCGGTGGGAGTACTATGACTCAGTGTACACAGAACGTTACATGGGTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TGTTTTTGTAGCACCTATAGCCATAACTGGCACCTGGGGGCCTGCGTTGCTGGCAGCTGTAGCATCATCTaGTTCCCACTGTCATGGCCA +
Preference number: 4 (lower is better)
Translates to: CFCSTYSHNWHLGACVAGSCSII*FPLSWP
Trigger: TGGCCATGACAGTGGGAAGCAGATGATGCTACAGCT...GCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGTGCTACAAAAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000678668.1
CDS-3UTR CCA 90 bp CTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGTCCTGCCTTTGGATATaGAACCCGTACAGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: LLRGELTVACSCWYAWTWSCLWI*NPYSLW
Trigger: CCAAAGACTGTACGGGTTCCATATCCAAAGGCAGGA...CCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp GAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATCACAGCTCCTGCCTTTaGATATGGAACCCGTACAGT +
Preference number: 4 (lower is better)
Translates to: ELTVACSCWYAWTWVPSHHSSCL*IWNPYS
Trigger: ACTGTACGGGTTCCATATCCAAAGGCAGGAGCTGTG...ATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp GCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCCACAGCTCCTGCCTTTaGATATGGAACCCGTACAGT +
Preference number: 4 (lower is better)
Translates to: ARVGMLGLGFPAMPCYLLHSSCL*IWNPYS
Trigger: ACTGTACGGGTTCCATATCCAAAGGCAGGAGCTGTG...GAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp TGTTTTTGTAGCACCTATAGCCATAACTGGCACCTGGGGGCCTGCGTTGCTGGCCACAGCTCCTGCCTTTaGATATGGAACCCGTACAGT +
Preference number: 4 (lower is better)
Translates to: CFCSTYSHNWHLGACVAGHSSCL*IWNPYS
Trigger: ACTGTACGGGTTCCATATCCAAAGGCAGGAGCTGTG...GCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGTGCTACAAAAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp CTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTGTCTTCTGGAGTTaGGAGACCCATGTAACGTTC +
Preference number: 4 (lower is better)
Translates to: LLRGELTVACSCWYAWTWVVFWS*ETHVTF
Trigger: GAACGTTACATGGGTCTCCCAACTCCAGAAGACAAC...CCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp ATTCCACACTTGAACACGCCACTTCCCGATCCCAGGACCATTGAGGTTACGTACTGGTATGCTTGGACTTaGGTTCCCAGCCATGCCCTG +
Preference number: 4 (lower is better)
Translates to: IPHLNTPLPDPRTIEVTYWYAWT*VPSHAL
Trigger: CAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCA...GTACGTAACCTCAATGGTCCTGGGATCGGGAAGTGGCGTGTTCAAGTGTGGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CCA 90 bp GCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCGTAGCCTGCTCGTGTTaGTATGCTTGGACTTGGGTT +
Preference number: 4 (lower is better)
Translates to: ARVGMLGLGFPAMPCYLLVACSC*YAWTWV
Trigger: AACCCAAGTCCAAGCATACCAACACGAGCAGGCTAC...GAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp ACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCACCTATAGCCATAACTaGCACCTGGGGGCCTGCGTT +
Preference number: 4 (lower is better)
Translates to: TWGPALLAVSLTFLWSLFTYSHN*HLGACV
Trigger: AACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGT...GAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp CTCTCAGCCCTTTATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGACCAGCCAGAGACAATGCTCTaGCTTTGCCGTGGCATCCAC +
Preference number: 4 (lower is better)
Translates to: LSALYHSRCCVEYRGADQPETML*LCRGIH
Trigger: GTGGATGCCACGGCAAAGCCAGAGCATTGTCTCTGG...CTGGTCTGCCCCTCTATACTCTACACAGCAGCGTGAATGATAAAGGGCTGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494507.2
3UTR CAA 72 bp GCACCTATAGCCATAACTGGCACCTGGGGGCCTGCGTaGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: APIAITGTWGPA*LAVSLTFLWSL
Trigger: AAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TTCTCAGAAAACTGTGCCAGTCTGGCTGTGAACAGCTCTTCTCCGAGGGGAGCTTTTATGACCCACTGGTaGCCATGTGACCCACTGTGT +
Preference number: 4 (lower is better)
Translates to: FSENCASLAVNSSSPRGAFMTHW*PCDPLC
Trigger: ACACAGTGGGTCACATGGTCACCAGTGGGTCATAAA...AGCTCCCCTCGGAGAAGAGCTGTTCACAGCCAGACTGGCACAGTTTTCTGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTACATATGCCAATTTATaGCCCACTGGTGACCATGTG +
Preference number: 4 (lower is better)
Translates to: DSSLLVLVCLDLGSQPCPTYANL*PTGDHV
Trigger: CACATGGTCACCAGTGGGTCATAAATTGGCATATGT...AGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGAGCAGAGTAGGCACTaGAGACTTCCTCTTCATAAA +
Preference number: 4 (lower is better)
Translates to: DSSLLVLVCLDLGSQPCPEQSRH*RLPLHK
Trigger: TTTATGAAGAGGAAGTCTTCAGTGCCTACTCTGCTC...AGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGAGCAGAGTAGGCACTaGAGACTTCCTCTTCATAAA +
Preference number: 4 (lower is better)
Translates to: LLRGELTVACSCWYAWTWEQSRH*RLPLHK
Trigger: TTTATGAAGAGGAAGTCTTCAGTGCCTACTCTGCTC...CCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTTTGGGTACTGCAGTaGCTCATCAGAGTAGAAGGA +
Preference number: 4 (lower is better)
Translates to: PARVGMLGLGFPAMPCYLLWVLQ*LIRVEG
Trigger: TCCTTCTACTCTGATGAGTCACTGCAGTACCCAAAG...AAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATCTTTGGGTACTGCAGTaGCTCATCAGAGTAGAAGGA +
Preference number: 4 (lower is better)
Translates to: ELTVACSCWYAWTWVPSHLWVLQ*LIRVEG
Trigger: TCCTTCTACTCTGATGAGTCACTGCAGTACCCAAAG...ATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGACCAGGACCGGAACATCGAGCTTCTATCCCGATaGCTTCCCAGGTGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: YHSRCCVEYRGADQDRNIELLSR*LPRCLL
Trigger: CAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTC...GATGTTCCGGTCCTGGTCTGCCCCTCTATACTCTACACAGCAGCGTGAATGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp AACGTTCTGTGTACACTGAGTCATAGTACTCCCACCGGGATACAGGCGCCACGGACAGTGTCTGCTTTTTaGCTACATGGGCCTGCATAC +
Preference number: 4 (lower is better)
Translates to: NVLCTLSHSTPTGIQAPRTVSAF*LHGPAY
Trigger: GTATGCAGGCCCATGTAGTCAAAAAGCAGACACTGT...CCGTGGCGCCTGTATCCCGGTGGGAGTACTATGACTCAGTGTACACAGAACGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CCAGGACTCTCAGCCCTTTATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGCTTCCGTACTGCTGTaGTGGTGCCTTCAGGAATCT +
Preference number: 4 (lower is better)
Translates to: PGLSALYHSRCCVEYRGAASVLL*WCLQES
Trigger: AGATTCCTGAAGGCACCATCACAGCAGTACGGAAGC...TGCCCCTCTATACTCTACACAGCAGCGTGAATGATAAAGGGCTGAGAGTCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434918.6
ENST00000678566.1
CDS-3UTR GCA 90 bp AGCTCTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACCTCATTTCAATGTGTTaGCGTGCCACTAAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: SSSPRGADSSLLVLVCLDLISMC*RATKQF
Trigger: GAACTGCTTAGTGGCACGGCAACACATTGAAATGAG...GTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp GACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTTCTGAAGACAGTGTCTaGTTTTTGACTACATGGGCC +
Preference number: 4 (lower is better)
Translates to: DSSLLVLVCLDLGSQPCPSEDSV*FLTTWA
Trigger: GGCCCATGTAGTCAAAAAGCAGACACTGTCTTCAGA...AGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp AGTCTGGCTGTGAACAGCTCTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGATCAGTATACCACATTaGCTGGAAATCCACTCCAAC +
Preference number: 4 (lower is better)
Translates to: SLAVNSSSPRGADSSLLVISIPH*LEIHSN
Trigger: GTTGGAGTGGATTTCCAGGCAATGTGGTATACTGAT...CACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAGAGCTGTTCACAGCCAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp CTCCTGCCTTTGGATATGGAACCCGTACAGTCTTTGGGTACTGCAGTGACTCATTTGGGTTCCCAGCCATaGCCTGCTATCTTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: LLPLDMEPVQSLGTAVTHLGSQP*PAIFSP
Trigger: GGGAGAGAAGATAGCAGGGCATGGCTGGGAACCCAA...ATGAGTCACTGCAGTACCCAAAGACTGTACGGGTTCCATATCCAAAGGCAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR GCA 90 bp CCAGGACTCTCAGCCCTTTATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGAGCTGACAGTAGCCTaGTCGTGTTGGTATGCTTGG +
Preference number: 4 (lower is better)
Translates to: PGLSALYHSRCCVEYRGAELTVA*SCWYAW
Trigger: CCAAGCATACCAACACGAGCAGGCTACTGTCAGCTC...TGCCCCTCTATACTCTACACAGCAGCGTGAATGATAAAGGGCTGAGAGTCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp CTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCTTTCTCAGAAAACTGTaGCAGTCTGGCTGTGAACAG +
Preference number: 4 (lower is better)
Translates to: LTVACSCWYAWTWVPSHAFLRKL*QSGCEQ
Trigger: CTGTTCACAGCCAGACTGGCACAGTTTTCTGAGAAA...GGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp CCATCTGTAGCTGCTCGTTGGATCATGCTGGTTCCTCAGTTACCTTCCAACAAATCGGTCCAGTGGCAGTaGCGACTCCACAGCATCTCT +
Preference number: 4 (lower is better)
Translates to: PSVAARWIMLVPQLPSNKSVQWQ*RLHSIS
Trigger: AGAGATGCTGTGGAGTCGGCACTGCCACTGGACCGA...TTTGTTGGAAGGTAACTGAGGAACCAGCATGATCCAACGAGCAGCTACAGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416189.6
CDS-3UTR CCA 90 bp AACGTTCTGTGTACACTGAGTCATAGTACTCCCACCGGGATACAGGCGCCACGGTCCTGCCTTTGGATATaGAACCCGTACAGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: NVLCTLSHSTPTGIQAPRSCLWI*NPYSLW
Trigger: CCAAAGACTGTACGGGTTCCATATCCAAAGGCAGGA...CCGTGGCGCCTGTATCCCGGTGGGAGTACTATGACTCAGTGTACACAGAACGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CCA 90 bp AACGTTCTGTGTACACTGAGTCATAGTACTCCCACCGGGATACAGGCGCCACGGGTTGTCTTCTGGAGTTaGGAGACCCATGTAACGTTC +
Preference number: 4 (lower is better)
Translates to: NVLCTLSHSTPTGIQAPRVVFWS*ETHVTF
Trigger: GAACGTTACATGGGTCTCCCAACTCCAGAAGACAAC...CCGTGGCGCCTGTATCCCGGTGGGAGTACTATGACTCAGTGTACACAGAACGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CCA 90 bp ATTCCACACTTGAACACGCCACTTCCCGATCCCAGGACCATTGAGGTTACGTACCATCGACCAGGGCTTTaGAGATCTGAGCTGACTGCT +
Preference number: 4 (lower is better)
Translates to: IPHLNTPLPDPRTIEVTYHRPGL*RSELTA
Trigger: AGCAGTCAGCTCAGATCTCCAAAGCCCTGGTCGATG...GTACGTAACCTCAATGGTCCTGGGATCGGGAAGTGGCGTGTTCAAGTGTGGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CCA 90 bp GTTAGAGCTTCTATCCCGATGACTTCCCAGGTGCCTTTTGTAATAAATGTGCAGGCCATAACTGGCACCTaGGGGCCTGCGTTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: VRASIPMTSQVPFVINVQAITGT*GPALLA
Trigger: TGCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGC...CTGCACATTTATTACAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CCA 90 bp CCATCTGTAGCTGCTCGTTGGATCATGCTGGTTCCTCAGTTACCTTCCAACAAACTGCCAGCAACAGCCTaGCAAGGAGAAGTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: PSVAARWIMLVPQLPSNKLPATA*QGEVGR
Trigger: CCTTCCCACTTCTCCTTGCCAGGCTGTTGCTGGCAG...TTTGTTGGAAGGTAACTGAGGAACCAGCATGATCCAACGAGCAGCTACAGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416189.6
CDS-3UTR TCA 90 bp GACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGTTCTCCAAGAAAACTaGGCTGTTTCCATATTCAGC +
Preference number: 4 (lower is better)
Translates to: DSSLLVLVCLDLGSQPCPVLQEN*AVSIFS
Trigger: GCTGAATATGGAAACAGCTCAGTTTTCTTGGAGAAC...AGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CTGCCTTTGGATATGGAACCCGTACAGTCTTTGGGTACTGCAGTGACTCATCAGCCACTGGTGACCATGTaGCCCACTGTGTGTTGTTTG +
Preference number: 4 (lower is better)
Translates to: LPLDMEPVQSLGTAVTHQPLVTM*PTVCCL
Trigger: CAAACAACACACAGTGGGTCACATGGTCACCAGTGG...CTGATGAGTCACTGCAGTACCCAAAGACTGTACGGGTTCCATATCCAAAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TATAGAGGGGCAGACCAGGACCGGAACATCTCAGCTGATAATACTTCGCCTCTTCCACTGGTGACCATGTaGCCCACTGTGTGTTGTTTG +
Preference number: 4 (lower is better)
Translates to: YRGADQDRNISADNTSPLPLVTM*PTVCCL
Trigger: CAAACAACACACAGTGGGTCACATGGTCACCAGTGG...AAGAGGCGAAGTATTATCAGCTGAGATGTTCCGGTCCTGGTCTGCCCCTCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTACATATGCCAATTTATaGCCCACTGGTGACCATGTG +
Preference number: 4 (lower is better)
Translates to: PARVGMLGLGFPAMPCYLTYANL*PTGDHV
Trigger: CACATGGTCACCAGTGGGTCATAAATTGGCATATGT...AAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TGCCGTGGCATCCACACTAGCACATGGGGGCTGTCAATGATAGTTGCACCCACAACATATGCCAATTTATaGCCCACTGGTGACCATGTG +
Preference number: 4 (lower is better)
Translates to: CRGIHTSTWGLSMIVAPTTYANL*PTGDHV
Trigger: CACATGGTCACCAGTGGGTCATAAATTGGCATATGT...TGTGGGTGCAACTATCATTGACAGCCCCCATGTGCTAGTGTGGATGCCACGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494507.2
CDS-3UTR TCA 90 bp CTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGCTTTCCCCGTCCATGTaGTTCTGTAACTTGGTAAAT +
Preference number: 4 (lower is better)
Translates to: LLRGELTVACSCWYAWTWLSPSM*FCNLVN
Trigger: ATTTACCAAGTTACAGAATCACATGGACGGGGAAAG...CCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCTCCCTACTTTGGGTACTGCAGTaGCTCATCAGAGTAGAAGGA +
Preference number: 4 (lower is better)
Translates to: VGMLGLGFPAMPCYLLSLLWVLQ*LIRVEG
Trigger: TCCTTCTACTCTGATGAGTCACTGCAGTACCCAAAG...TAGGGAGAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TGTTTTTGTAGCACCTATAGCCATAACTGGCACCTGGGGGCCTGCGTTGCTGGCAGTTCTGAATCCTCCTaGGCCACTGCAAAGAAATTC +
Preference number: 4 (lower is better)
Translates to: CFCSTYSHNWHLGACVAGSSESS*ATAKKF
Trigger: GAATTTCTTTGCAGTGGCTCAGGAGGATTCAGAACT...GCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGTGCTACAAAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp AGTCTGGCTGTGAACAGCTCTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGACTTCGCCTCTTTACTaGATGACACAGAATAGTACT +
Preference number: 4 (lower is better)
Translates to: SLAVNSSSPRGADSSLLVTSPLY*MTQNST
Trigger: AGTACTATTCTGTGTCATTCAGTAAAGAGGCGAAGT...CACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAGAGCTGTTCACAGCCAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TTCTCAGAAAACTGTGCCAGTCTGGCTGTGAACAGCTCTTCTCCGAGGGGAGCTACAGTGTCTGCTTTTTaGCTACATGGGCCTGCATAC +
Preference number: 4 (lower is better)
Translates to: FSENCASLAVNSSSPRGATVSAF*LHGPAY
Trigger: GTATGCAGGCCCATGTAGTCAAAAAGCAGACACTGT...AGCTCCCCTCGGAGAAGAGCTGTTCACAGCCAGACTGGCACAGTTTTCTGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACCGATCCCAGGACCATTaGGGTTACGTACCCTCCATA +
Preference number: 4 (lower is better)
Translates to: WGPALLAVSLTFLWSLFNRSQDH*GYVPSI
Trigger: TATGGAGGGTACGTAACCTCAATGGTCCTGGGATCG...GTTGAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TATAGAGGGGCAGACCAGGACCGGAACATCTCAGCTGATAATACTTCGCCTCTTCGATCCCAGGACCATTaGGGTTACGTACCCTCCATA +
Preference number: 4 (lower is better)
Translates to: YRGADQDRNISADNTSPLRSQDH*GYVPSI
Trigger: TATGGAGGGTACGTAACCTCAATGGTCCTGGGATCG...AAGAGGCGAAGTATTATCAGCTGAGATGTTCCGGTCCTGGTCTGCCCCTCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGTTTAACAGGGCAAGCTaGTGTGTTCACATCTCAGTT +
Preference number: 4 (lower is better)
Translates to: LLRGELTVACSCWYAWTWFNRAS*CVHISV
Trigger: AACTGAGATGTGAACACATCAGCTTGCCCTGTTAAA...CCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CAGTGCCGACTCCACAGCATCTCTGAGGAGCTTTTCCTTCAGTCCCCAAGAAGATGCCTCTGGAACCATTaGTCATTCCCTACTCAACTG +
Preference number: 4 (lower is better)
Translates to: QCRLHSISEELFLQSPRRCLWNH*SFPTQL
Trigger: CAGTTGAGTAGGGAATGATCAATGGTTCCAGAGGCA...TCTTCTTGGGGACTGAAGGAAAAGCTCCTCAGAGATGCTGTGGAGTCGGCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416189.6
CDS-3UTR GCA 90 bp CGGGATACAGGCGCCACGGCTATTCCACACTTGAACACGCCACTTCCCGATCCCATTGTTCCAAACATATaGCAATTTATGACCCACTGG +
Preference number: 4 (lower is better)
Translates to: RDTGATAIPHLNTPLPDPIVPNI*QFMTHW
Trigger: CCAGTGGGTCATAAATTGGCATATGTTTGGAACAAT...GGGATCGGGAAGTGGCGTGTTCAAGTGTGGAATAGCCGTGGCGCCTGTATCCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp GACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTAATGTTTTCTGTGCTTaGAAGGTAAGTGGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: DSSLLVLVCLDLGSQPCPNVFCA*KVSGPV
Trigger: AACTGGGCCACTTACCTTGCAAGCACAGAAAACATT...AGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp CTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGATCAGTATACCACATTaGCTGGAAATCCACTCCAAC +
Preference number: 4 (lower is better)
Translates to: LLRGELTVACSCWYAWTWISIPH*LEIHSN
Trigger: GTTGGAGTGGATTTCCAGGCAATGTGGTATACTGAT...CCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp GAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATTCACTGCCCACATCTTaGCATCCCTTTAAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: ELTVACSCWYAWTWVPSHSLPTS*HPFKEE
Trigger: CTCTTCTTTAAAGGGATGGCAAGATGTGGGCAGTGA...ATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp CCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTTCACTGCCCACATCTTaGCATCCCTTTAAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: PARVGMLGLGFPAMPCYLSLPTS*HPFKEE
Trigger: CTCTTCTTTAAAGGGATGGCAAGATGTGGGCAGTGA...AAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp ATGGAACCCGTACAGTCTTTGGGTACTGCAGTGACTCATCAGAGTAGAAGGAGTTTGGGTTCCCAGCCATaGCCTGCTATCTTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: MEPVQSLGTAVTHQSRRSLGSQP*PAIFSP
Trigger: GGGAGAGAAGATAGCAGGGCATGGCTGGGAACCCAA...ACTCCTTCTACTCTGATGAGTCACTGCAGTACCCAAAGACTGTACGGGTTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TTTGTAGCACCTATAGCCATAACTGGCACCTGGGGGCCTGCGTTGCTGGCAGTTCTTTCCCATCACCCTTaGTGTGTTTTTGTAGCACCT +
Preference number: 4 (lower is better)
Translates to: FVAPIAITGTWGPALLAVLSHHP*CVFVAP
Trigger: AGGTGCTACAAAAACACAGCAAGGGTGATGGGAAAG...AACTGCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGTGCTACAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp CTCCTGCCTTTGGATATGGAACCCGTACAGTCTTTGGGTACTGCAGTGACTCATAGGATGCAATGGTGGTaGAGTTGGCACTCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: LLPLDMEPVQSLGTAVTHRMQWW*SWHSPE
Trigger: CTCAGGAGAGTGCCAACTGCACCACCATTGCATCCT...ATGAGTCACTGCAGTACCCAAAGACTGTACGGGTTCCATATCCAAAGGCAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416189.6
CDS-3UTR CCA 90 bp AGGGAATCTATGCAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAGCGCTGCTCCGGGCGGTaGAGTCACTCGCCGCTGGCA +
Preference number: 4 (lower is better)
Translates to: RESMQSLHKNNSYLLFQQRCSGR*SHSPLA
Trigger: TGCCAGCGGCGAGTGACTCCACCGCCCGGAGCAGCG...CTGCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTGCATAGATTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360534.8
ENST00000676810.1
ENST00000678566.1
CDS-3UTR CCA 90 bp ATTCCACACTTGAACACGCCACTTCCCGATCCCAGGACCATTGAGGTTACGTACCACAGCTCCTGCCTTTaGATATGGAACCCGTACAGT +
Preference number: 4 (lower is better)
Translates to: IPHLNTPLPDPRTIEVTYHSSCL*IWNPYS
Trigger: ACTGTACGGGTTCCATATCCAAAGGCAGGAGCTGTG...GTACGTAACCTCAATGGTCCTGGGATCGGGAAGTGGCGTGTTCAAGTGTGGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CCA 90 bp AGTCTGGCTGTGAACAGCTCTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGTTTTTGGAGGGCATCTaGACATTCTGCAGCATTTTA +
Preference number: 4 (lower is better)
Translates to: SLAVNSSSPRGADSSLLVFLEGI*TFCSIL
Trigger: TAAAATGCTGCAGAATGTCCAGATGCCCTCCAAAAA...CACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAGAGCTGTTCACAGCCAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp TGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACCATCGACCAGGGCTTTaGAGATCTGAGCTGACTGCT +
Preference number: 4 (lower is better)
Translates to: WGPALLAVSLTFLWSLFNHRPGL*RSELTA
Trigger: AGCAGTCAGCTCAGATCTCCAAAGCCCTGGTCGATG...GTTGAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp GGCACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTGTATACCACATTGCCTaGAAATCCACTCCAACATCG +
Preference number: 4 (lower is better)
Translates to: GTWGPALLAVSLTFLWSLVYHIA*KSTPTS
Trigger: CGATGTTGGAGTGGATTTCCAGGCAATGTGGTATAC...AAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp CTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCTGGGTATATATATGTTaGTGTGCTGTGCTGCTAGCT +
Preference number: 4 (lower is better)
Translates to: LTVACSCWYAWTWVPSHAWVYIC*CAVLLA
Trigger: AGCTAGCAGCACAGCACACCAACATATATATACCCA...GGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp GTCATAGTACTCCCACCGGGATACAGGCGCCACGGCTATTCCACACTTGAACACATCCACACTAGCACATaGGGGCTGTCAATGATAGTT +
Preference number: 4 (lower is better)
Translates to: VIVLPPGYRRHGYSTLEHIHTST*GLSMIV
Trigger: AACTATCATTGACAGCCCCCATGTGCTAGTGTGGAT...GTGTTCAAGTGTGGAATAGCCGTGGCGCCTGTATCCCGGTGGGAGTACTATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494507.2
CDS-3UTR CCA 90 bp AGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACTGCTGTGGTTTTACTTAGAACGGATGCGCAGACCCTaGGCCGGCGACTCGGGGACC +
Preference number: 4 (lower is better)
Translates to: SFPYISLESFQLLWFYLERMRRP*AGDSGT
Trigger: GGTCCCCGAGTCGCCGGCCCAGGGTCTGCGCATCCG...TTCTAAGTAAAACCACAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676810.1
3UTR CAA 72 bp GAAAAAGGCAGCTGTGTCACCTTGCCTCTGGAACCATaGATCATTCCCTACTCAACTGTGCACCCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: EKGSCVTLPLEP*IIPYSTVHPGF
Trigger: GAAGCCAGGGTGCACAGTTGAGTAGGGAATGATCAATGGTTCCAGAGGCAAGGTGACACAGCTGCCTTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416189.6
CDS-3UTR TCA 90 bp TTTCATCTTTTAACAGGGCAAGCTGATGTGTTCACATCTCAGTTTCAAGCTGCCGCGTCTCCTCGGAAGTaGGCGTTCAGAGAAGGAGCG +
Preference number: 4 (lower is better)
Translates to: FHLLTGQADVFTSQFQAAASPRK*AFREGA
Trigger: CGCTCCTTCTCTGAACGCTCACTTCCGAGGAGACGC...GGCAGCTTGAAACTGAGATGTGAACACATCAGCTTGCCCTGTTAAAAGATGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360534.8
ENST00000676810.1
ENST00000678566.1
CDS-3UTR TCA 90 bp AACGTTCTGTGTACACTGAGTCATAGTACTCCCACCGGGATACAGGCGCCACGGGTTCTCCAAGAAAACTaGGCTGTTTCCATATTCAGC +
Preference number: 4 (lower is better)
Translates to: NVLCTLSHSTPTGIQAPRVLQEN*AVSIFS
Trigger: GCTGAATATGGAAACAGCTCAGTTTTCTTGGAGAAC...CCGTGGCGCCTGTATCCCGGTGGGAGTACTATGACTCAGTGTACACAGAACGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GGAGAGCAGTGTCTTGATACTCCCAGCATATGCGATATTGTGCTTCTTAACCCCCCACTGGTGACCATGTaGCCCACTGTGTGTTGTTTG +
Preference number: 4 (lower is better)
Translates to: GEQCLDTPSICDIVLLNPPLVTM*PTVCCL
Trigger: CAAACAACACACAGTGGGTCACATGGTCACCAGTGG...GGGGTTAAGAAGCACAATATCGCATATGCTGGGAGTATCAAGACACTGCTCTCC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR TCA 90 bp AGGACCATTGAGGTTACGTACCCTCCATATGACCAGCCCCAAATTGCAATTCGTCCACTGGTGACCATGTaGCCCACTGTGTGTTGTTTG +
Preference number: 4 (lower is better)
Translates to: RTIEVTYPPYDQPQIAIRPLVTM*PTVCCL
Trigger: CAAACAACACACAGTGGGTCACATGGTCACCAGTGG...ACGAATTGCAATTTGGGGCTGGTCATATGGAGGGTACGTAACCTCAATGGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp AACGTTCTGTGTACACTGAGTCATAGTACTCCCACCGGGATACAGGCGCCACGGCTTTCCCCGTCCATGTaGTTCTGTAACTTGGTAAAT +
Preference number: 4 (lower is better)
Translates to: NVLCTLSHSTPTGIQAPRLSPSM*FCNLVN
Trigger: ATTTACCAAGTTACAGAATCACATGGACGGGGAAAG...CCGTGGCGCCTGTATCCCGGTGGGAGTACTATGACTCAGTGTACACAGAACGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GGCACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTCTTTCCCCGTCCATGTaGTTCTGTAACTTGGTAAAT +
Preference number: 4 (lower is better)
Translates to: GTWGPALLAVSLTFLWSLLSPSM*FCNLVN
Trigger: ATTTACCAAGTTACAGAATCACATGGACGGGGAAAG...AAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TTCTCAGAAAACTGTGCCAGTCTGGCTGTGAACAGCTCTTCTCCGAGGGGAGCTGAGCAGAGTAGGCACTaGAGACTTCCTCTTCATAAA +
Preference number: 4 (lower is better)
Translates to: FSENCASLAVNSSSPRGAEQSRH*RLPLHK
Trigger: TTTATGAAGAGGAAGTCTTCAGTGCCTACTCTGCTC...AGCTCCCCTCGGAGAAGAGCTGTTCACAGCCAGACTGGCACAGTTTTCTGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCTCCCTAATCAGTTCTGAATCCTCCTaGGCCACTGCAAAGAAATTC +
Preference number: 4 (lower is better)
Translates to: GMLGLGFPAMPCYLLSLISSESS*ATAKKF
Trigger: GAATTTCTTTGCAGTGGCTCAGGAGGATTCAGAACT...GATTAGGGAGAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTAGTCACAAATATCCATaGCCGAATAGTTCTGAATCC +
Preference number: 4 (lower is better)
Translates to: DSSLLVLVCLDLGSQPCPSHKYP*PNSSES
Trigger: GGATTCAGAACTATTCGGTCATGGATATTTGTGACT...AGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GGCACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTGGTAAAATGAGGTTCTaGAGGCCTAAATCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: GTWGPALLAVSLTFLWSLGKMRF*RPKSSN
Trigger: GTTGGAAGATTTAGGCCTTCAGAACCTCATTTTACC...AAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATCCATCAAGGGTAAAATaGGGTTCTGAAGGCCTAAAT +
Preference number: 4 (lower is better)
Translates to: ELTVACSCWYAWTWVPSHPSRVK*GSEGLN
Trigger: ATTTAGGCCTTCAGAACCTCATTTTACCCTTGATGG...ATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GGCACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTCCATCAAGGGTAAAATaGGGTTCTGAAGGCCTAAAT +
Preference number: 4 (lower is better)
Translates to: GTWGPALLAVSLTFLWSLPSRVK*GSEGLN
Trigger: ATTTAGGCCTTCAGAACCTCATTTTACCCTTGATGG...AAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp ATGGAACCCGTACAGTCTTTGGGTACTGCAGTGACTCATCAGAGTAGAAGGAGTGAGCTTCTATCCCGATaGCTTCCCAGGTGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: MEPVQSLGTAVTHQSRRSELLSR*LPRCLL
Trigger: CAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTC...ACTCCTTCTACTCTGATGAGTCACTGCAGTACCCAAAGACTGTACGGGTTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTGATTCAGCTCACAACTaGGGCATGTCACTTTTGTAT +
Preference number: 4 (lower is better)
Translates to: PARVGMLGLGFPAMPCYLDSAHN*GMSLLY
Trigger: ATACAAAAGTGACATGCCTCAGTTGTGAGCTGAATC...AAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TTTGTAGCACCTATAGCCATAACTGGCACCTGGGGGCCTGCGTTGCTGGCAGTTCGCCTCTTTACTGAATaGCACAGAATAGTACTGACA +
Preference number: 4 (lower is better)
Translates to: FVAPIAITGTWGPALLAVRLFTE*HRIVLT
Trigger: TGTCAGTACTATTCTGTGTCATTCAGTAAAGAGGCG...AACTGCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGTGCTACAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCGCCTCTTTACTGAATaGCACAGAATAGTACTGACA +
Preference number: 4 (lower is better)
Translates to: PARVGMLGLGFPAMPCYLRLFTE*HRIVLT
Trigger: TGTCAGTACTATTCTGTGTCATTCAGTAAAGAGGCG...AAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GGCACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTCGCCTCTTTACTGAATaGCACAGAATAGTACTGACA +
Preference number: 4 (lower is better)
Translates to: GTWGPALLAVSLTFLWSLRLFTE*HRIVLT
Trigger: TGTCAGTACTATTCTGTGTCATTCAGTAAAGAGGCG...AAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCCGCCTCTTTACTGAATaGCACAGAATAGTACTGACA +
Preference number: 4 (lower is better)
Translates to: ARVGMLGLGFPAMPCYLLRLFTE*HRIVLT
Trigger: TGTCAGTACTATTCTGTGTCATTCAGTAAAGAGGCG...GAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GTGCATTGGGCACCATTTGAACTGAGCACAGAGCAAATCATGTGTGTTAGAGGACGGCTATTCCACACTTaGACACGCCACTTCCCGATC +
Preference number: 4 (lower is better)
Translates to: VHWAPFELSTEQIMCVRGRLFHT*TRHFPI
Trigger: GATCGGGAAGTGGCGTGTTCAAGTGTGGAATAGCCG...TCCTCTAACACACATGATTTGCTCTGTGCTCAGTTCAAATGGTGCCCAATGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR TCA 90 bp CTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCAATGGCATGGTATTTTaGGGTGCTAAGGTAAAGAGA +
Preference number: 4 (lower is better)
Translates to: LTVACSCWYAWTWVPSHANGMVF*GAKVKR
Trigger: TCTCTTTACCTTAGCACCTCAAAATACCATGCCATT...GGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCATCCACTTTGCCATATaGAATGTACTGTTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: LTVACSCWYAWTWVPSHAIHFAI*NVLFSK
Trigger: CTTGGAGAACAGTACATTTCATATGGCAAAGTGGAT...GGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR GCA 90 bp GACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTATCCTCCTGAGCCACTaGAAAGAAATTCTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: DSSLLVLVCLDLGSQPCPILLSH*KEILSC
Trigger: ACAAGAAAGAATTTCTTTGCAGTGGCTCAGGAGGAT...AGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp AACGTTCTGTGTACACTGAGTCATAGTACTCCCACCGGGATACAGGCGCCACGGATCAGTATACCACATTaGCTGGAAATCCACTCCAAC +
Preference number: 4 (lower is better)
Translates to: NVLCTLSHSTPTGIQAPRISIPH*LEIHSN
Trigger: GTTGGAGTGGATTTCCAGGCAATGTGGTATACTGAT...CCGTGGCGCCTGTATCCCGGTGGGAGTACTATGACTCAGTGTACACAGAACGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TTCTCAGAAAACTGTGCCAGTCTGGCTGTGAACAGCTCTTCTCCGAGGGGAGCTTCACTGCCCACATCTTaGCATCCCTTTAAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: FSENCASLAVNSSSPRGASLPTS*HPFKEE
Trigger: CTCTTCTTTAAAGGGATGGCAAGATGTGGGCAGTGA...AGCTCCCCTCGGAGAAGAGCTGTTCACAGCCAGACTGGCACAGTTTTCTGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp AGCTCTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACCCACTGTGTGTTGTTTaGAATCCTCTCTTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: SSSPRGADSSLLVLVCLDPLCVV*NPLFCN
Trigger: ATTACAGAAGAGAGGATTCCAAACAACACACAGTGG...GTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp AGTCTGGCTGTGAACAGCTCTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGGGAGTATTCAATAAGTaGGACTTCTGTGTCGTTAAA +
Preference number: 4 (lower is better)
Translates to: SLAVNSSSPRGADSSLLVGVFNK*DFCVVK
Trigger: TTTAACGACACAGAAGTCCCACTTATTGAATACTCC...CACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAGAGCTGTTCACAGCCAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp GTAGTGATCCCACGGAGCACAGCCCACAGCCTTCCTGATGTACTTAATGCAACTTCCTGCCTTTGGATATaGAACCCGTACAGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: VVIPRSTAHSLPDVLNATSCLWI*NPYSLW
Trigger: CCAAAGACTGTACGGGTTCCATATCCAAAGGCAGGA...AGTTGCATTAAGTACATCAGGAAGGCTGTGGGCTGTGCTCCGTGGGATCACTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434918.6
ENST00000678566.1
CDS-3UTR CCA 90 bp CTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGAAAGAACTTTACAGTTaGATTCACAGCTCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: LLRGELTVACSCWYAWTWKELYS*IHSSCL
Trigger: AAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTT...CCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp GACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTTTTTTGGAGGGCATCTaGACATTCTGCAGCATTTTA +
Preference number: 4 (lower is better)
Translates to: DSSLLVLVCLDLGSQPCPFLEGI*TFCSIL
Trigger: TAAAATGCTGCAGAATGTCCAGATGCCCTCCAAAAA...AGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp GATCCCAGGACCATTGAGGTTACGTACCCTCCATATGACCAGCCCCAAATTGCAGTTGTCTTCTGGAGTTaGGAGACCCATGTAACGTTC +
Preference number: 4 (lower is better)
Translates to: DPRTIEVTYPPYDQPQIAVVFWS*ETHVTF
Trigger: GAACGTTACATGGGTCTCCCAACTCCAGAAGACAAC...TGCAATTTGGGGCTGGTCATATGGAGGGTACGTAACCTCAATGGTCCTGGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CCA 90 bp ACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCGTTGTCTTCTGGAGTTaGGAGACCCATGTAACGTTC +
Preference number: 4 (lower is better)
Translates to: TWGPALLAVSLTFLWSLFVVFWS*ETHVTF
Trigger: GAACGTTACATGGGTCTCCCAACTCCAGAAGACAAC...GAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp GGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCTCCCTAATCGTATACCACATTGCCTaGAAATCCACTCCAACATCG +
Preference number: 4 (lower is better)
Translates to: GMLGLGFPAMPCYLLSLIVYHIA*KSTPTS
Trigger: CGATGTTGGAGTGGATTTCCAGGCAATGTGGTATAC...GATTAGGGAGAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp ACACGCCACTTCCCGATCCCAGGACCATTGAGGTTACGTACCCTCCATATGACCCTGCTAGCTATTCCATaGTCTTCATCAGTATACCAC +
Preference number: 4 (lower is better)
Translates to: TRHFPIPGPLRLRTLHMTLLAIP*SSSVYH
Trigger: GTGGTATACTGATGAAGACCATGGAATAGCTAGCAG...GGTCATATGGAGGGTACGTAACCTCAATGGTCCTGGGATCGGGAAGTGGCGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CCA 90 bp AGGACCATTGAGGTTACGTACCCTCCATATGACCAGCCCCAAATTGCAATTCGTGCAAGGATGCAATGGTaGTGCAGTTGGCACTCTCCT +
Preference number: 4 (lower is better)
Translates to: RTIEVTYPPYDQPQIAIRARMQW*CSWHSP
Trigger: AGGAGAGTGCCAACTGCACCACCATTGCATCCTTGC...ACGAATTGCAATTTGGGGCTGGTCATATGGAGGGTACGTAACCTCAATGGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416189.6
CDS-3UTR CCA 90 bp CCATCTGTAGCTGCTCGTTGGATCATGCTGGTTCCTCAGTTACCTTCCAACAAATGGGCAAGGATGCAATaGTGGTGCAGTTGGCACTCT +
Preference number: 4 (lower is better)
Translates to: PSVAARWIMLVPQLPSNKWARMQ*WCSWHS
Trigger: AGAGTGCCAACTGCACCACCATTGCATCCTTGCCCA...TTTGTTGGAAGGTAACTGAGGAACCAGCATGATCCAACGAGCAGCTACAGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416189.6
CDS-3UTR CCA 90 bp CAGTGCCGACTCCACAGCATCTCTGAGGAGCTTTTCCTTCAGTCCCCAAGAAGAACTCAGAGTGATAAATaGGCAAGGATGCAATGGTGG +
Preference number: 4 (lower is better)
Translates to: QCRLHSISEELFLQSPRRTQSDK*ARMQWW
Trigger: CCACCATTGCATCCTTGCCCATTTATCACTCTGAGT...TCTTCTTGGGGACTGAAGGAAAAGCTCCTCAGAGATGCTGTGGAGTCGGCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416189.6
CDS-3UTR CCA 90 bp TCTTACTCTGTAATGGTCAAGGTTGTCTTCTGGAGTTGGGAGACCCATGTAACGGAGCAACCTGCCCACTaGTTCTTCCATCAGGCAACC +
Preference number: 4 (lower is better)
Translates to: SYSVMVKVVFWSWETHVTEQPAH*FFHQAT
Trigger: GGTTGCCTGATGGAAGAACCAGTGGGCAGGTTGCTC...CGTTACATGGGTCTCCCAACTCCAGAAGACAACCTTGACCATTACAGAGTAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494507.2
CDS-3UTR CCA 90 bp GGCGCTTACACAGCATGCATGGGAAGGAATGATTATCCCATTAAGCCCACTTGTCCCACTCCTGTGCATTaGGCACCATTTGAACTGAGC +
Preference number: 4 (lower is better)
Translates to: GAYTACMGRNDYPIKPTCPTPVH*APFELS
Trigger: GCTCAGTTCAAATGGTGCCCAATGCACAGGAGTGGG...ACAAGTGGGCTTAATGGGATAATCATTCCTTCCCATGCATGCTGTGTAAGCGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676768.1
3UTR CAA 72 bp CAGCTCCTGCCTTTGGATATGGAACCCGTACAGTCTTaGGGTACTGCAGTGACTCATCAGAGTAGAAGGAGT +
Preference number: 4 (lower is better)
Translates to: QLLPLDMEPVQS*GTAVTHQSRRS
Trigger: ACTCCTTCTACTCTGATGAGTCACTGCAGTACCCAAAGACTGTACGGGTTCCATATCCAAAGGCAGGAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCTCCCTAATCGTTCTCCAAGAAAACTaGGCTGTTTCCATATTCAGC +
Preference number: 4 (lower is better)
Translates to: GMLGLGFPAMPCYLLSLIVLQEN*AVSIFS
Trigger: GCTGAATATGGAAACAGCTCAGTTTTCTTGGAGAAC...GATTAGGGAGAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GGCGCTTACACAGCATGCATGGGAAGGAATGATTATCCCATTAAGCCCACTTGTTTTATGACCCACTGGTaGCCATGTGACCCACTGTGT +
Preference number: 4 (lower is better)
Translates to: GAYTACMGRNDYPIKPTCFMTHW*PCDPLC
Trigger: ACACAGTGGGTCACATGGTCACCAGTGGGTCATAAA...ACAAGTGGGCTTAATGGGATAATCATTCCTTCCCATGCATGCTGTGTAAGCGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR TCA 90 bp GAGGGGCAGACCAGGACCGGAACATCTCAGCTGATAATACTTCGCCTCTTTACTACATATGCCAATTTATaGCCCACTGGTGACCATGTG +
Preference number: 4 (lower is better)
Translates to: EGQTRTGTSQLIILRLFTTYANL*PTGDHV
Trigger: CACATGGTCACCAGTGGGTCATAAATTGGCATATGT...AGTAAAGAGGCGAAGTATTATCAGCTGAGATGTTCCGGTCCTGGTCTGCCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCTCCCTAATCCTTTCCCCGTCCATGTaGTTCTGTAACTTGGTAAAT +
Preference number: 4 (lower is better)
Translates to: GMLGLGFPAMPCYLLSLILSPSM*FCNLVN
Trigger: ATTTACCAAGTTACAGAATCACATGGACGGGGAAAG...GATTAGGGAGAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGACCAGGACCGGAACATCGAGCAGAGTAGGCACTaGAGACTTCCTCTTCATAAA +
Preference number: 4 (lower is better)
Translates to: YHSRCCVEYRGADQDRNIEQSRH*RLPLHK
Trigger: TTTATGAAGAGGAAGTCTTCAGTGCCTACTCTGCTC...GATGTTCCGGTCCTGGTCTGCCCCTCTATACTCTACACAGCAGCGTGAATGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CTCTCAGCCCTTTATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGACCAGGAGCAGAGTAGGCACTaGAGACTTCCTCTTCATAAA +
Preference number: 4 (lower is better)
Translates to: LSALYHSRCCVEYRGADQEQSRH*RLPLHK
Trigger: TTTATGAAGAGGAAGTCTTCAGTGCCTACTCTGCTC...CTGGTCTGCCCCTCTATACTCTACACAGCAGCGTGAATGATAAAGGGCTGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCTCCCTAATCGGTAAAATGAGGTTCTaGAGGCCTAAATCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: GMLGLGFPAMPCYLLSLIGKMRF*RPKSSN
Trigger: GTTGGAAGATTTAGGCCTTCAGAACCTCATTTTACC...GATTAGGGAGAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCTCCCTAGATTCAGCTCACAACTaGGGCATGTCACTTTTGTAT +
Preference number: 4 (lower is better)
Translates to: VGMLGLGFPAMPCYLLSLDSAHN*GMSLLY
Trigger: ATACAAAAGTGACATGCCTCAGTTGTGAGCTGAATC...TAGGGAGAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GGCACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTACTTCGCCTCTTTACTaGATGACACAGAATAGTACT +
Preference number: 4 (lower is better)
Translates to: GTWGPALLAVSLTFLWSLTSPLY*MTQNST
Trigger: AGTACTATTCTGTGTCATTCAGTAAAGAGGCGAAGT...AAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TTTGGAATGATCAAAGTGCCAGAAGGGTCCCTAGTACTTATGCTAGCACTTCCACGGCTATTCCACACTTaGACACGCCACTTCCCGATC +
Preference number: 4 (lower is better)
Translates to: FGMIKVPEGSLVLMLALPRLFHT*TRHFPI
Trigger: GATCGGGAAGTGGCGTGTTCAAGTGTGGAATAGCCG...TGGAAGTGCTAGCATAAGTACTAGGGACCCTTCTGGCACTTTGATCATTCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494507.2
CDS-3UTR TCA 90 bp AAAGAACTTTACAGTTGGATTCACAGCTCCTGCCTTTGGATATGGAACCCGTACCGGCTATTCCACACTTaGACACGCCACTTCCCGATC +
Preference number: 4 (lower is better)
Translates to: KELYSWIHSSCLWIWNPYRLFHT*TRHFPI
Trigger: GATCGGGAAGTGGCGTGTTCAAGTGTGGAATAGCCG...GTACGGGTTCCATATCCAAAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GTCATAGTACTCCCACCGGGATACAGGCGCCACGGCTATTCCACACTTGAACACAATGGCATGGTATTTTaGGGTGCTAAGGTAAAGAGA +
Preference number: 4 (lower is better)
Translates to: VIVLPPGYRRHGYSTLEHNGMVF*GAKVKR
Trigger: TCTCTTTACCTTAGCACCTCAAAATACCATGCCATT...GTGTTCAAGTGTGGAATAGCCGTGGCGCCTGTATCCCGGTGGGAGTACTATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GGCACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTAATGGCATGGTATTTTaGGGTGCTAAGGTAAAGAGA +
Preference number: 4 (lower is better)
Translates to: GTWGPALLAVSLTFLWSLNGMVF*GAKVKR
Trigger: TCTCTTTACCTTAGCACCTCAAAATACCATGCCATT...AAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGAAGAGAACAACATTTaGACCAGTCCAGTTAGAAAA +
Preference number: 4 (lower is better)
Translates to: LLRGELTVACSCWYAWTWEENNI*TSPVRK
Trigger: TTTTCTAACTGGACTGGTTCAAATGTTGTTCTCTTC...CCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp ATTTACAATGCTTTCCCATCACCCTTGCTGTGTTTTTGTAGCACCTATAGCCATGTGCCAGTCTGGCTGTaGACAGCTCTTCTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: IYNAFPSPLLCFCSTYSHVPVWL*TALLRG
Trigger: CCCTCGGAGAAGAGCTGTTCACAGCCAGACTGGCAC...ATGGCTATAGGTGCTACAAAAACACAGCAAGGGTGATGGGAAAGCATTGTAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GCACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTTTAACAGGGCAAGCTaGTGTGTTCACATCTCAGTT +
Preference number: 4 (lower is better)
Translates to: APGGLRCWQFPLHFFGVFFNRAS*CVHISV
Trigger: AACTGAGATGTGAACACATCAGCTTGCCCTGTTAAA...AAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGTGC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp ACACGCCACTTCCCGATCCCAGGACCATTGAGGTTACGTACCCTCCATATGACCATCCACTTTGCCATATaGAATGTACTGTTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: TRHFPIPGPLRLRTLHMTIHFAI*NVLFSK
Trigger: CTTGGAGAACAGTACATTTCATATGGCAAAGTGGAT...GGTCATATGGAGGGTACGTAACCTCAATGGTCCTGGGATCGGGAAGTGGCGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416189.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR TCA 90 bp ATGGAACCCGTACAGTCTTTGGGTACTGCAGTGACTCATCAGAGTAGAAGGAGTACTCCACAGCATCTCTaGGGAGCTTTTCCTTCAGTC +
Preference number: 4 (lower is better)
Translates to: MEPVQSLGTAVTHQSRRSTPQHL*GAFPSV
Trigger: GACTGAAGGAAAAGCTCCTCAGAGATGCTGTGGAGT...ACTCCTTCTACTCTGATGAGTCACTGCAGTACCCAAAGACTGTACGGGTTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416189.6
CDS-3UTR GCA 90 bp AGTCTGGCTGTGAACAGCTCTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGTCTAAGAGAATAAACTaGCCATCAGGAGATATTGAA +
Preference number: 4 (lower is better)
Translates to: SLAVNSSSPRGADSSLLVSKRIN*PSGDIE
Trigger: TTCAATATCTCCTGATGGGCAGTTTATTCTCTTAGA...CACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAGAGCTGTTCACAGCCAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp CTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCATTGTTCCAAACATATaGCAATTTATGACCCACTGG +
Preference number: 4 (lower is better)
Translates to: LTVACSCWYAWTWVPSHAIVPNI*QFMTHW
Trigger: CCAGTGGGTCATAAATTGGCATATGTTTGGAACAAT...GGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp CTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGAATTCTTTCTTGTGTTaGCCATGTCACATCACACAA +
Preference number: 4 (lower is better)
Translates to: LLRGELTVACSCWYAWTWNSFLC*PCHITQ
Trigger: TTGTGTGATGTGACATGGGCAACACAAGAAAGAATT...CCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp GGCACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTATCCTCCTGAGCCACTaGAAAGAAATTCTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: GTWGPALLAVSLTFLWSLILLSH*KEILSC
Trigger: ACAAGAAAGAATTTCTTTGCAGTGGCTCAGGAGGAT...AAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TGTTTTTGTAGCACCTATAGCCATAACTGGCACCTGGGGGCCTGCGTTGCTGGCATCCTCCTGAGCCACTaGAAAGAAATTCTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: CFCSTYSHNWHLGACVAGILLSH*KEILSC
Trigger: ACAAGAAAGAATTTCTTTGCAGTGGCTCAGGAGGAT...GCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGTGCTACAAAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp GAGGGGCAGACCAGGACCGGAACATCTCAGCTGATAATACTTCGCCTCTTTACTCTCATTTCAATGTGTTaGCGTGCCACTAAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: EGQTRTGTSQLIILRLFTLISMC*RATKQF
Trigger: GAACTGCTTAGTGGCACGGCAACACATTGAAATGAG...AGTAAAGAGGCGAAGTATTATCAGCTGAGATGTTCCGGTCCTGGTCTGCCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp GATCCCAGGACCATTGAGGTTACGTACCCTCCATATGACCAGCCCCAAATTGCACTCATTTCAATGTGTTaGCGTGCCACTAAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: DPRTIEVTYPPYDQPQIALISMC*RATKQF
Trigger: GAACTGCTTAGTGGCACGGCAACACATTGAAATGAG...TGCAATTTGGGGCTGGTCATATGGAGGGTACGTAACCTCAATGGTCCTGGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp ACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCCTCATTTCAATGTGTTaGCGTGCCACTAAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: TWGPALLAVSLTFLWSLFLISMC*RATKQF
Trigger: GAACTGCTTAGTGGCACGGCAACACATTGAAATGAG...GAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TTCTCAGAAAACTGTGCCAGTCTGGCTGTGAACAGCTCTTCTCCGAGGGGAGCTCTTTATCATTCACGCTaGTGTGTAGAGTATAGAGGG +
Preference number: 4 (lower is better)
Translates to: FSENCASLAVNSSSPRGALYHSR*CVEYRG
Trigger: CCCTCTATACTCTACACAGCAGCGTGAATGATAAAG...AGCTCCCCTCGGAGAAGAGCTGTTCACAGCCAGACTGGCACAGTTTTCTGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp ACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCTCTGAAGACAGTGTCTaGTTTTTGACTACATGGGCC +
Preference number: 4 (lower is better)
Translates to: TWGPALLAVSLTFLWSLFSEDSV*FLTTWA
Trigger: GGCCCATGTAGTCAAAAAGCAGACACTGTCTTCAGA...GAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGACCAGGACCGGAACATCTCTGAAGACAGTGTCTaGTTTTTGACTACATGGGCC +
Preference number: 4 (lower is better)
Translates to: YHSRCCVEYRGADQDRNISEDSV*FLTTWA
Trigger: GGCCCATGTAGTCAAAAAGCAGACACTGTCTTCAGA...GATGTTCCGGTCCTGGTCTGCCCCTCTATACTCTACACAGCAGCGTGAATGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp AACGTTCTGTGTACACTGAGTCATAGTACTCCCACCGGGATACAGGCGCCACGGCTTCTGTTGATTGCATaGATGATCTTATCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: NVLCTLSHSTPTGIQAPRLLLIA*MILSPW
Trigger: CCAAGGAGATAAGATCATGCATGCAATCAACAGAAG...CCGTGGCGCCTGTATCCCGGTGGGAGTACTATGACTCAGTGTACACAGAACGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TGCCGTGGCATCCACACTAGCACATGGGGGCTGTCAATGATAGTTGCACCCACACTTCTGTTGATTGCATaGATGATCTTATCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: CRGIHTSTWGLSMIVAPTLLLIA*MILSPW
Trigger: CCAAGGAGATAAGATCATGCATGCAATCAACAGAAG...TGTGGGTGCAACTATCATTGACAGCCCCCATGTGCTAGTGTGGATGCCACGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494507.2
CDS-3UTR GCA 90 bp GAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGTGAACGTTATCATCTaGTGTTCCATGAATAAGGAG +
Preference number: 4 (lower is better)
Translates to: ELTVACSCWYAWTWVPSHVNVII*CSMNKE
Trigger: CTCCTTATTCATGGAACAGCAGATGATAACGTTCAC...ATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TGTTTTTGTAGCACCTATAGCCATAACTGGCACCTGGGGGCCTGCGTTGCTGGCGTGAACGTTATCATCTaGTGTTCCATGAATAAGGAG +
Preference number: 4 (lower is better)
Translates to: CFCSTYSHNWHLGACVAGVNVII*CSMNKE
Trigger: CTCCTTATTCATGGAACAGCAGATGATAACGTTCAC...GCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGTGCTACAAAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp CCAGGACTCTCAGCCCTTTATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCATTTCTCAGAAAACTGTaGCAGTCTGGCTGTGAACAG +
Preference number: 4 (lower is better)
Translates to: PGLSALYHSRCCVEYRGAFLRKL*QSGCEQ
Trigger: CTGTTCACAGCCAGACTGGCACAGTTTTCTGAGAAA...TGCCCCTCTATACTCTACACAGCAGCGTGAATGATAAAGGGCTGAGAGTCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp CAGTGTCTGCTTTTTGACTACATGGGCCTGCATACACATCTAATAGTAGAGGATCCTGGGGGCCTGCGTTaGTGGCAGTTTCCCTTACAT +
Preference number: 4 (lower is better)
Translates to: QCLLFDYMGLHTHLIVEDPGGLR*WQFPLH
Trigger: ATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGG...ATCCTCTACTATTAGATGTGTATGCAGGCCCATGTAGTCAAAAAGCAGACACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp ACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCCTTTCCCATCACCCTTaGTGTGTTTTTGTAGCACCT +
Preference number: 4 (lower is better)
Translates to: TWGPALLAVSLTFLWSLFLSHHP*CVFVAP
Trigger: AGGTGCTACAAAAACACAGCAAGGGTGATGGGAAAG...GAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp GGAGAGCAGTGTCTTGATACTCCCAGCATATGCGATATTGTGCTTCTTAACCCCACTGTCCCACTCCTGTaGATTGGGCACCATTTGAAC +
Preference number: 4 (lower is better)
Translates to: GEQCLDTPSICDIVLLNPTVPLL*IGHHLN
Trigger: GTTCAAATGGTGCCCAATGCACAGGAGTGGGACAGT...GGGGTTAAGAAGCACAATATCGCATATGCTGGGAGTATCAAGACACTGCTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR CCA 90 bp TTGGTGACTGAGCTGAGAGAGTCTGTATTTACAACAAAGAACTTTACAGTTGGAGGAGTCACTCGCCGCTaGCAAGTTTCGGCCCCGAGT +
Preference number: 4 (lower is better)
Translates to: LVTELRESVFTTKNFTVGGVTRR*QVSAPS
Trigger: ACTCGGGGCCGAAACTTGCCAGCGGCGAGTGACTCC...TCCAACTGTAAAGTTCTTTGTTGTAAATACAGACTCTCTCAGCTCAGTCACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434918.6
CDS-3UTR CCA 90 bp GAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATCCACTGTGTGTTGTTTaGAATCCTCTCTTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: ELTVACSCWYAWTWVPSHPLCVV*NPLFCN
Trigger: ATTACAGAAGAGAGGATTCCAAACAACACACAGTGG...ATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp AGCTCTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACGGAGTATTCAATAAGTaGGACTTCTGTGTCGTTAAA +
Preference number: 4 (lower is better)
Translates to: SSSPRGADSSLLVLVCLDGVFNK*DFCVVK
Trigger: TTTAACGACACAGAAGTCCCACTTATTGAATACTCC...GTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp ACACAAGTAGTGATCCCACGGAGCACAGCCCACAGCCTTCCTGATGTACTTAATTCCTGCCTTTGGATATaGAACCCGTACAGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: TQVVIPRSTAHSLPDVLNSCLWI*NPYSLW
Trigger: CCAAAGACTGTACGGGTTCCATATCCAAAGGCAGGA...ATTAAGTACATCAGGAAGGCTGTGGGCTGTGCTCCGTGGGATCACTACTTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434918.6
ENST00000678566.1
CDS-3UTR CCA 90 bp AAAGAATTAGCCCAGAAAGAGGAAACTAGACCCCACCAGCAACTTCCCTCCCCTTCCTGCCTTTGGATATaGAACCCGTACAGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: KELAQKEETRPHQQLPSPSCLWI*NPYSLW
Trigger: CCAAAGACTGTACGGGTTCCATATCCAAAGGCAGGA...AGGGGAGGGAAGTTGCTGGTGGGGTCTAGTTTCCTCTTTCTGGGCTAATTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR CCA 90 bp GCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCAAAGAACTTTACAGTTaGATTCACAGCTCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: ARVGMLGLGFPAMPCYLLKELYS*IHSSCL
Trigger: AAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTT...GAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp ACACGCCACTTCCCGATCCCAGGACCATTGAGGTTACGTACCCTCCATATGACCAAAGAACTTTACAGTTaGATTCACAGCTCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: TRHFPIPGPLRLRTLHMTKELYS*IHSSCL
Trigger: AAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTT...GGTCATATGGAGGGTACGTAACCTCAATGGTCCTGGGATCGGGAAGTGGCGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CCA 90 bp CTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCAGTTCCATCTTCCACTaGATTCATCATAGTCACAAA +
Preference number: 4 (lower is better)
Translates to: LTVACSCWYAWTWVPSHASSIFH*IHHSHK
Trigger: TTTGTGACTATGATGAATCCAGTGGAAGATGGAACT...GGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp GACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTAGTATAGATAATCACTaGTTAGAGCTTCTATCCCGA +
Preference number: 4 (lower is better)
Translates to: DSSLLVLVCLDLGSQPCPSIDNH*LELLSR
Trigger: TCGGGATAGAAGCTCTAACCAGTGATTATCTATACT...AGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp AGCTCTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACAGTATAGATAATCACTaGTTAGAGCTTCTATCCCGA +
Preference number: 4 (lower is better)
Translates to: SSSPRGADSSLLVLVCLDSIDNH*LELLSR
Trigger: TCGGGATAGAAGCTCTAACCAGTGATTATCTATACT...GTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp ATTCCACACTTGAACACGCCACTTCCCGATCCCAGGACCATTGAGGTTACGTACGTATACCACATTGCCTaGAAATCCACTCCAACATCG +
Preference number: 4 (lower is better)
Translates to: IPHLNTPLPDPRTIEVTYVYHIA*KSTPTS
Trigger: CGATGTTGGAGTGGATTTCCAGGCAATGTGGTATAC...GTACGTAACCTCAATGGTCCTGGGATCGGGAAGTGGCGTGTTCAAGTGTGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CCA 90 bp AGTCTGGCTGTGAACAGCTCTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGTCTTTTCAACTGCTGTaGTTTTACTTAGAAGTCAGT +
Preference number: 4 (lower is better)
Translates to: SLAVNSSSPRGADSSLLVSFQLL*FYLEVS
Trigger: ACTGACTTCTAAGTAAAACCACAGCAGTTGAAAAGA...CACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAGAGCTGTTCACAGCCAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp GTGGGTATATATATGTTGGTGTGCTGTGCTGCTAGCTATTCCATGGTCTTCATCACCTATAGCCATAACTaGCACCTGGGGGCCTGCGTT +
Preference number: 4 (lower is better)
Translates to: VGIYMLVCCAASYSMVFITYSHN*HLGACV
Trigger: AACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGT...GATGAAGACCATGGAATAGCTAGCAGCACAGCACACCAACATATATATACCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CCA 90 bp CCAGGACTCTCAGCCCTTTATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCACAACTCCAGAGAAAATaGATGCTTCCGTACTGCTGT +
Preference number: 4 (lower is better)
Translates to: PGLSALYHSRCCVEYRGAQLQRK*MLPYCC
Trigger: ACAGCAGTACGGAAGCATCCATTTTCTCTGGAGTTG...TGCCCCTCTATACTCTACACAGCAGCGTGAATGATAAAGGGCTGAGAGTCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434918.6
ENST00000678566.1
CDS-3UTR CCA 90 bp TGCCGTGGCATCCACACTAGCACATGGGGGCTGTCAATGATAGTTGCACCCACAAGTAAGGGAAGCTATTaGAGTATCTCTAAACCACCT +
Preference number: 4 (lower is better)
Translates to: CRGIHTSTWGLSMIVAPTSKGSY*SISKPP
Trigger: AGGTGGTTTAGAGATACTCCAATAGCTTCCCTTACT...TGTGGGTGCAACTATCATTGACAGCCCCCATGTGCTAGTGTGGATGCCACGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494507.2
CDS-3UTR CCA 90 bp TTGCACCCACACCATATTTTAAATGCTATAGCCCATCTGCAGAGCAACCTGCCCCCAGCTGCATCAATGTaGCACCAGAGACAATGCTCT +
Preference number: 4 (lower is better)
Translates to: LHPHHILNAIAHLQSNLPPAASM*HQRQCS
Trigger: AGAGCATTGTCTCTGGTGCCACATTGATGCAGCTGG...GGGCAGGTTGCTCTGCAGATGGGCTATAGCATTTAAAATATGGTGTGGGTGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494507.2
3UTR CAA 72 bp CTTCAGTCCCCAAGAAGAACCATCTGTAGCTGCTCGTaGGATCATGCTGGTTCCTCAGTTACCTTCCAACAA +
Preference number: 4 (lower is better)
Translates to: LQSPRRTICSCS*DHAGSSVTFQQ
Trigger: TTGTTGGAAGGTAACTGAGGAACCAGCATGATCCAACGAGCAGCTACAGATGGTTCTTCTTGGGGACTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416189.6
CDS-3UTR TCA 90 bp ACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCGTTCTCCAAGAAAACTaGGCTGTTTCCATATTCAGC +
Preference number: 4 (lower is better)
Translates to: TWGPALLAVSLTFLWSLFVLQEN*AVSIFS
Trigger: GCTGAATATGGAAACAGCTCAGTTTTCTTGGAGAAC...GAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCATCATAAATGTCATATaGAGCTGTGTAGGAATGCCT +
Preference number: 4 (lower is better)
Translates to: ARVGMLGLGFPAMPCYLLIINVI*SCVGMP
Trigger: AGGCATTCCTACACAGCTTCATATGACATTTATGAT...GAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
CDS-3UTR TCA 90 bp TGTCTTCCAGGACTCTCAGCCCTTTATCATTCACGCTGCTGTGTAGAGTATAGATTTATGACCCACTGGTaGCCATGTGACCCACTGTGT +
Preference number: 4 (lower is better)
Translates to: CLPGLSALYHSRCCVEYRFMTHW*PCDPLC
Trigger: ACACAGTGGGTCACATGGTCACCAGTGGGTCATAAA...TCTATACTCTACACAGCAGCGTGAATGATAAAGGGCTGAGAGTCCTGGAAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CCCTACTCAACTGTGCACCCTGGCTTCTCAATTAACACCCTTTACAGTCCAGTGACATATGCCAATTTATaGCCCACTGGTGACCATGTG +
Preference number: 4 (lower is better)
Translates to: PYSTVHPGFSINTLYSPVTYANL*PTGDHV
Trigger: CACATGGTCACCAGTGGGTCATAAATTGGCATATGT...CACTGGACTGTAAAGGGTGTTAATTGAGAAGCCAGGGTGCACAGTTGAGTAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416189.6
CDS-3UTR TCA 90 bp GGAGACCCATGTAACGTTCTGTGTACACTGAGTCATAGTACTCCCACCGGGATAACATATGCCAATTTATaGCCCACTGGTGACCATGTG +
Preference number: 4 (lower is better)
Translates to: GDPCNVLCTLSHSTPTGITYANL*PTGDHV
Trigger: CACATGGTCACCAGTGGGTCATAAATTGGCATATGT...TATCCCGGTGGGAGTACTATGACTCAGTGTACACAGAACGTTACATGGGTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp ATTCCACACTTGAACACGCCACTTCCCGATCCCAGGACCATTGAGGTTACGTACCTTTCCCCGTCCATGTaGTTCTGTAACTTGGTAAAT +
Preference number: 4 (lower is better)
Translates to: IPHLNTPLPDPRTIEVTYLSPSM*FCNLVN
Trigger: ATTTACCAAGTTACAGAATCACATGGACGGGGAAAG...GTACGTAACCTCAATGGTCCTGGGATCGGGAAGTGGCGTGTTCAAGTGTGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp AGGACCATTGAGGTTACGTACCCTCCATATGACCAGCCCCAAATTGCAATTCGTCTTTGGGTACTGCAGTaGCTCATCAGAGTAGAAGGA +
Preference number: 4 (lower is better)
Translates to: RTIEVTYPPYDQPQIAIRLWVLQ*LIRVEG
Trigger: TCCTTCTACTCTGATGAGTCACTGCAGTACCCAAAG...ACGAATTGCAATTTGGGGCTGGTCATATGGAGGGTACGTAACCTCAATGGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CTCCTGCCTTTGGATATGGAACCCGTACAGTCTTTGGGTACTGCAGTGACTCATAGTTCTGAATCCTCCTaGGCCACTGCAAAGAAATTC +
Preference number: 4 (lower is better)
Translates to: LLPLDMEPVQSLGTAVTHSSESS*ATAKKF
Trigger: GAATTTCTTTGCAGTGGCTCAGGAGGATTCAGAACT...ATGAGTCACTGCAGTACCCAAAGACTGTACGGGTTCCATATCCAAAGGCAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GGAGACCCATGTAACGTTCTGTGTACACTGAGTCATAGTACTCCCACCGGGATAAGTTCTGAATCCTCCTaGGCCACTGCAAAGAAATTC +
Preference number: 4 (lower is better)
Translates to: GDPCNVLCTLSHSTPTGISSESS*ATAKKF
Trigger: GAATTTCTTTGCAGTGGCTCAGGAGGATTCAGAACT...TATCCCGGTGGGAGTACTATGACTCAGTGTACACAGAACGTTACATGGGTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GTAGTGATCCCACGGAGCACAGCCCACAGCCTTCCTGATGTACTTAATGCAACTGGTAAAATGAGGTTCTaGAGGCCTAAATCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: VVIPRSTAHSLPDVLNATGKMRF*RPKSSN
Trigger: GTTGGAAGATTTAGGCCTTCAGAACCTCATTTTACC...AGTTGCATTAAGTACATCAGGAAGGCTGTGGGCTGTGCTCCGTGGGATCACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434918.6
ENST00000678566.1
CDS-3UTR TCA 90 bp GTAGTGATCCCACGGAGCACAGCCCACAGCCTTCCTGATGTACTTAATGCAACTCCATCAAGGGTAAAATaGGGTTCTGAAGGCCTAAAT +
Preference number: 4 (lower is better)
Translates to: VVIPRSTAHSLPDVLNATPSRVK*GSEGLN
Trigger: ATTTAGGCCTTCAGAACCTCATTTTACCCTTGATGG...AGTTGCATTAAGTACATCAGGAAGGCTGTGGGCTGTGCTCCGTGGGATCACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434918.6
ENST00000678566.1
CDS-3UTR TCA 90 bp GTTAGAGCTTCTATCCCGATGACTTCCCAGGTGCCTTTTGTAATAAATGTGCAGGAGCTTCTATCCCGATaGCTTCCCAGGTGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: VRASIPMTSQVPFVINVQELLSR*LPRCLL
Trigger: CAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTC...CTGCACATTTATTACAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTCTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp AAAGAACTTTACAGTTGGATTCACAGCTCCTGCCTTTGGATATGGAACCCGTACGAGCTTCTATCCCGATaGCTTCCCAGGTGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: KELYSWIHSSCLWIWNPYELLSR*LPRCLL
Trigger: CAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTC...GTACGGGTTCCATATCCAAAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR TCA 90 bp ATTCCACACTTGAACACGCCACTTCCCGATCCCAGGACCATTGAGGTTACGTACGATTCAGCTCACAACTaGGGCATGTCACTTTTGTAT +
Preference number: 4 (lower is better)
Translates to: IPHLNTPLPDPRTIEVTYDSAHN*GMSLLY
Trigger: ATACAAAAGTGACATGCCTCAGTTGTGAGCTGAATC...GTACGTAACCTCAATGGTCCTGGGATCGGGAAGTGGCGTGTTCAAGTGTGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp ATTCCACACTTGAACACGCCACTTCCCGATCCCAGGACCATTGAGGTTACGTACCGCCTCTTTACTGAATaGCACAGAATAGTACTGACA +
Preference number: 4 (lower is better)
Translates to: IPHLNTPLPDPRTIEVTYRLFTE*HRIVLT
Trigger: TGTCAGTACTATTCTGTGTCATTCAGTAAAGAGGCG...GTACGTAACCTCAATGGTCCTGGGATCGGGAAGTGGCGTGTTCAAGTGTGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GCACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTACTTCGCCTCTTTACTaGATGACACAGAATAGTACT +
Preference number: 4 (lower is better)
Translates to: APGGLRCWQFPLHFFGVFTSPLY*MTQNST
Trigger: AGTACTATTCTGTGTCATTCAGTAAAGAGGCGAAGT...AAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GCACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTCACAAATCCCATTTTTaGAAATTGTCTGGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: APGGLRCWQFPLHFFGVFHKSHF*KLSGCF
Trigger: GAAGCAGCCAGACAATTTTCAAAAATGGGATTTGTG...AAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp AAAGAACTTTACAGTTGGATTCACAGCTCCTGCCTTTGGATATGGAACCCGTACCGATCCCAGGACCATTaGGGTTACGTACCCTCCATA +
Preference number: 4 (lower is better)
Translates to: KELYSWIHSSCLWIWNPYRSQDH*GYVPSI
Trigger: TATGGAGGGTACGTAACCTCAATGGTCCTGGGATCG...GTACGGGTTCCATATCCAAAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CAATCACATGAACAGGAGAGCAGTGTCTTGATACTCCCAGCATATGCGATATTGCGATCCCAGGACCATTaGGGTTACGTACCCTCCATA +
Preference number: 4 (lower is better)
Translates to: QSHEQESSVLILPAYAILRSQDH*GYVPSI
Trigger: TATGGAGGGTACGTAACCTCAATGGTCCTGGGATCG...CAATATCGCATATGCTGGGAGTATCAAGACACTGCTCTCCTGTTCATGTGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR TCA 90 bp TTTCATCTTTTAACAGGGCAAGCTGATGTGTTCACATCTCAGTTTCAAGCTGCCCGGCTATTCCACACTTaGACACGCCACTTCCCGATC +
Preference number: 4 (lower is better)
Translates to: FHLLTGQADVFTSQFQAARLFHT*TRHFPI
Trigger: GATCGGGAAGTGGCGTGTTCAAGTGTGGAATAGCCG...GGCAGCTTGAAACTGAGATGTGAACACATCAGCTTGCCCTGTTAAAAGATGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TTTGTAGCACCTATAGCCATAACTGGCACCTGGGGGCCTGCGTTGCTGGCAGTTAGAAACATTGTTTTATaGAGTGGCTCATGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: FVAPIAITGTWGPALLAVRNIVL*SGSCGY
Trigger: ATACCCACATGAGCCACTTCATAAAACAATGTTTCT...AACTGCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGTGCTACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TGTTTTTGTAGCACCTATAGCCATAACTGGCACCTGGGGGCCTGCGTTGCTGGCAGAAACATTGTTTTATaGAGTGGCTCATGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: CFCSTYSHNWHLGACVAGRNIVL*SGSCGY
Trigger: ATACCCACATGAGCCACTTCATAAAACAATGTTTCT...GCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGTGCTACAAAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCAGAAACATTGTTTTATaGAGTGGCTCATGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: ARVGMLGLGFPAMPCYLLRNIVL*SGSCGY
Trigger: ATACCCACATGAGCCACTTCATAAAACAATGTTTCT...GAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCTCCCTAATCAATGGCATGGTATTTTaGGGTGCTAAGGTAAAGAGA +
Preference number: 4 (lower is better)
Translates to: GMLGLGFPAMPCYLLSLINGMVF*GAKVKR
Trigger: TCTCTTTACCTTAGCACCTCAAAATACCATGCCATT...GATTAGGGAGAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATAGATCATCATCATCTTaGCAGTGCAGTTTTGAGATA +
Preference number: 4 (lower is better)
Translates to: ELTVACSCWYAWTWVPSHRSSSS*QCSFEI
Trigger: TATCTCAAAACTGCACTGTCAAGATGATGATGATCT...ATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TTCTCAGAAAACTGTGCCAGTCTGGCTGTGAACAGCTCTTCTCCGAGGGGAGCTGGTAATAATCTGTTGTaGAGACAGAAGTCCCTACTT +
Preference number: 4 (lower is better)
Translates to: FSENCASLAVNSSSPRGAGNNLL*RQKSLL
Trigger: AAGTAGGGACTTCTGTCTTCACAACAGATTATTACC...AGCTCCCCTCGGAGAAGAGCTGTTCACAGCCAGACTGGCACAGTTTTCTGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TTACAACAAAGAACTTTACAGTTGGATTCACAGCTCCTGCCTTTGGATATGGAAGTGCCAGTCTGGCTGTaGACAGCTCTTCTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: LQQRTLQLDSQLLPLDMEVPVWL*TALLRG
Trigger: CCCTCGGAGAAGAGCTGTTCACAGCCAGACTGGCAC...TTCCATATCCAAAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTTGTTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR TCA 90 bp ACACAAGTAGTGATCCCACGGAGCACAGCCCACAGCCTTCCTGATGTACTTAATATGCTAACCAATTTATaGCCCACTGGTGACCATGTG +
Preference number: 4 (lower is better)
Translates to: TQVVIPRSTAHSLPDVLNMLTNL*PTGDHV
Trigger: CACATGGTCACCAGTGGGTCATAAATTGGTTAGCAT...ATTAAGTACATCAGGAAGGCTGTGGGCTGTGCTCCGTGGGATCACTACTTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434918.6
CDS-3UTR TCA 90 bp ATTCCACACTTGAACACGCCACTTCCCGATCCCAGGACCATTGAGGTTACGTACAGCAAAGTTTTGGAATaGTCAAAGTGCCAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: IPHLNTPLPDPRTIEVTYSKVLE*SKCQKG
Trigger: ACCCTTCTGGCACTTTGATCATTCCAAAACTTTGCT...GTACGTAACCTCAATGGTCCTGGGATCGGGAAGTGGCGTGTTCAAGTGTGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494507.2
CDS-3UTR TCA 90 bp CAGGAGAGCAGTGTCTTGATACTCCCAGCATATGCGATATTGTGCTTCTTAACCAGGAGAGCAGTGTCTTaGTACTCCCAGCATATGCGA +
Preference number: 4 (lower is better)
Translates to: QESSVLILPAYAILCFLTRRAVS*YSQHMR
Trigger: TCGCATATGCTGGGAGTATCAAGACACTGCTCTCCT...GGTTAAGAAGCACAATATCGCATATGCTGGGAGTATCAAGACACTGCTCTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR GCA 90 bp GACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTTCTAAGAGAATAAACTaGCCATCAGGAGATATTGAA +
Preference number: 4 (lower is better)
Translates to: DSSLLVLVCLDLGSQPCPSKRIN*PSGDIE
Trigger: TTCAATATCTCCTGATGGGCAGTTTATTCTCTTAGA...AGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp GAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATATTGTTCCAAACATATaGCAATTTATGACCCACTGG +
Preference number: 4 (lower is better)
Translates to: ELTVACSCWYAWTWVPSHIVPNI*QFMTHW
Trigger: CCAGTGGGTCATAAATTGGCATATGTTTGGAACAAT...ATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TGTTTTTGTAGCACCTATAGCCATAACTGGCACCTGGGGGCCTGCGTTGCTGGCATTGTTCCAAACATATaGCAATTTATGACCCACTGG +
Preference number: 4 (lower is better)
Translates to: CFCSTYSHNWHLGACVAGIVPNI*QFMTHW
Trigger: CCAGTGGGTCATAAATTGGCATATGTTTGGAACAAT...GCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGTGCTACAAAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TTTGTAGCACCTATAGCCATAACTGGCACCTGGGGGCCTGCGTTGCTGGCAGTTATTGTTCCAAACATATaGCAATTTATGACCCACTGG +
Preference number: 4 (lower is better)
Translates to: FVAPIAITGTWGPALLAVIVPNI*QFMTHW
Trigger: CCAGTGGGTCATAAATTGGCATATGTTTGGAACAAT...AACTGCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGTGCTACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp AACGTTCTGTGTACACTGAGTCATAGTACTCCCACCGGGATACAGGCGCCACGGAATTCTTTCTTGTGTTaGCCATGTCACATCACACAA +
Preference number: 4 (lower is better)
Translates to: NVLCTLSHSTPTGIQAPRNSFLC*PCHITQ
Trigger: TTGTGTGATGTGACATGGGCAACACAAGAAAGAATT...CCGTGGCGCCTGTATCCCGGTGGGAGTACTATGACTCAGTGTACACAGAACGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TGTTTTTGTAGCACCTATAGCCATAACTGGCACCTGGGGGCCTGCGTTGCTGGCAATTCTTTCTTGTGTTaGCCATGTCACATCACACAA +
Preference number: 4 (lower is better)
Translates to: CFCSTYSHNWHLGACVAGNSFLC*PCHITQ
Trigger: TTGTGTGATGTGACATGGGCAACACAAGAAAGAATT...GCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGTGCTACAAAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACCTCATTTCAATGTGTTaGCGTGCCACTAAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: WGPALLAVSLTFLWSLFNLISMC*RATKQF
Trigger: GAACTGCTTAGTGGCACGGCAACACATTGAAATGAG...GTTGAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp CTCTCAGCCCTTTATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGACCAGAATGTTTTCTGTGCTTaGAAGGTAAGTGGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: LSALYHSRCCVEYRGADQNVFCA*KVSGPV
Trigger: AACTGGGCCACTTACCTTGCAAGCACAGAAAACATT...CTGGTCTGCCCCTCTATACTCTACACAGCAGCGTGAATGATAAAGGGCTGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp CCAGGACTCTCAGCCCTTTATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAAATGTTTTCTGTGCTTaGAAGGTAAGTGGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: PGLSALYHSRCCVEYRGANVFCA*KVSGPV
Trigger: AACTGGGCCACTTACCTTGCAAGCACAGAAAACATT...TGCCCCTCTATACTCTACACAGCAGCGTGAATGATAAAGGGCTGAGAGTCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp GAGGGGCAGACCAGGACCGGAACATCTCAGCTGATAATACTTCGCCTCTTTACTAATGTTTTCTGTGCTTaGAAGGTAAGTGGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: EGQTRTGTSQLIILRLFTNVFCA*KVSGPV
Trigger: AACTGGGCCACTTACCTTGCAAGCACAGAAAACATT...AGTAAAGAGGCGAAGTATTATCAGCTGAGATGTTCCGGTCCTGGTCTGCCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp GCACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTCTTCTGTTGATTGCATaGATGATCTTATCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: APGGLRCWQFPLHFFGVFLLLIA*MILSPW
Trigger: CCAAGGAGATAAGATCATGCATGCAATCAACAGAAG...AAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TGTGACCCACTGTGTGTTGTTTGGAATCCTCTCTTCTGTAATCAGCTGCCTTTTCTCTTATCCTGTCCCTaGCCTAGTGACATCACTGCC +
Preference number: 4 (lower is better)
Translates to: CDPLCVVWNPLFCNQLPFLLSCP*PSDITA
Trigger: GGCAGTGATGTCACTAGGGCAGGGACAGGATAAGAG...AAAAGGCAGCTGATTACAGAAGAGAGGATTCCAAACAACACACAGTGGGTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676479.1
ENST00000676624.1
CDS-3UTR GCA 90 bp CCTCCATATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTCTGCTCGTGTTGGTATaGTTGGACTTGGGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: PPYDQPQIAIRLLSTNPILLVLV*LDLGSQ
Trigger: CTGGGAACCCAAGTCCAAGCATACCAACACGAGCAG...AATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATATGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp CTCCAGAGAAAATGGATGCTTCCGTACTGCTGTGATGGTGCCTTCAGGAATCTGTTTCTCAGAAAACTGTaGCAGTCTGGCTGTGAACAG +
Preference number: 4 (lower is better)
Translates to: LQRKWMLPYCCDGAFRNLFLRKL*QSGCEQ
Trigger: CTGTTCACAGCCAGACTGGCACAGTTTTCTGAGAAA...CAGATTCCTGAAGGCACCATCACAGCAGTACGGAAGCATCCATTTTCTCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678566.1
CDS-3UTR GCA 90 bp TTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACTGCTGTGGTTTTCCTGGGGGCCTGCGTTaGTGGCAGTTTCCCTTACAT +
Preference number: 4 (lower is better)
Translates to: LLAVSLTFLWSLFNCCGFPGGLR*WQFPLH
Trigger: ATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGG...AAAACCACAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp GTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCTCCCTAAAAGCACATTTACAATaGTTTCCCATCACCCTTGCT +
Preference number: 4 (lower is better)
Translates to: VGMLGLGFPAMPCYLLSLKAHLQ*FPITLA
Trigger: AGCAAGGGTGATGGGAAAGCATTGTAAATGTGCTTT...TAGGGAGAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TTCTCAGAAAACTGTGCCAGTCTGGCTGTGAACAGCTCTTCTCCGAGGGGAGCTAAAGCACATTTACAATaGTTTCCCATCACCCTTGCT +
Preference number: 4 (lower is better)
Translates to: FSENCASLAVNSSSPRGAKAHLQ*FPITLA
Trigger: AGCAAGGGTGATGGGAAAGCATTGTAAATGTGCTTT...AGCTCCCCTCGGAGAAGAGCTGTTCACAGCCAGACTGGCACAGTTTTCTGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp GTTAGAGCTTCTATCCCGATGACTTCCCAGGTGCCTTTTGTAATAAATGTGCAGACAATGCTCTGGCTTTaGCGTGGCATCCACACTAGC +
Preference number: 4 (lower is better)
Translates to: VRASIPMTSQVPFVINVQTMLWL*RGIHTS
Trigger: GCTAGTGTGGATGCCACGGCAAAGCCAGAGCATTGT...CTGCACATTTATTACAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTCTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494507.2
CDS-3UTR GCA 90 bp TCACTGGTTAGAGCTTCTATCCCGATGACTTCCCAGGTGCCTTTTGTAATAAATTGGCACCAGAGACAATaGTCTGGCTTTGCCGTGGCA +
Preference number: 4 (lower is better)
Translates to: SLVRASIPMTSQVPFVINWHQRQ*SGFAVA
Trigger: TGCCACGGCAAAGCCAGAGCATTGTCTCTGGTGCCA...ATTTATTACAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTCTAACCAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494507.2
CDS-3UTR GCA 90 bp GAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATCAAAACATCATTCACTaGATCATCTCCAGCTTAGAA +
Preference number: 4 (lower is better)
Translates to: ELTVACSCWYAWTWVPSHQNIIH*IISSLE
Trigger: TTCTAAGCTGGAGATGATGCAGTGAATGATGTTTTG...ATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678668.1
CDS-3UTR CCA 90 bp AGCACTTCCAGCTGCATCAATGTGGCACCAGAGACAATGCTCTGGCTTTGCCGTCCACTGTGTGTTGTTTaGAATCCTCTCTTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: STSSCINVAPETMLWLCRPLCVV*NPLFCN
Trigger: ATTACAGAAGAGAGGATTCCAAACAACACACAGTGG...ACGGCAAAGCCAGAGCATTGTCTCTGGTGCCACATTGATGCAGCTGGAAGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494507.2
CDS-3UTR CCA 90 bp CAGGAGAGCAGTGTCTTGATACTCCCAGCATATGCGATATTGTGCTTCTTAACCCACAGCTCCTGCCTTTaGATATGGAACCCGTACAGT +
Preference number: 4 (lower is better)
Translates to: QESSVLILPAYAILCFLTHSSCL*IWNPYS
Trigger: ACTGTACGGGTTCCATATCCAAAGGCAGGAGCTGTG...GGTTAAGAAGCACAATATCGCATATGCTGGGAGTATCAAGACACTGCTCTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR CCA 90 bp GTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCTCCCTAAAAGAACTTTACAGTTaGATTCACAGCTCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: VGMLGLGFPAMPCYLLSLKELYS*IHSSCL
Trigger: AAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTT...TAGGGAGAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp GAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATAGTTCCATCTTCCACTaGATTCATCATAGTCACAAA +
Preference number: 4 (lower is better)
Translates to: ELTVACSCWYAWTWVPSHSSIFH*IHHSHK
Trigger: TTTGTGACTATGATGAATCCAGTGGAAGATGGAACT...ATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp TGTTTTTGTAGCACCTATAGCCATAACTGGCACCTGGGGGCCTGCGTTGCTGGCAGTTCCATCTTCCACTaGATTCATCATAGTCACAAA +
Preference number: 4 (lower is better)
Translates to: CFCSTYSHNWHLGACVAGSSIFH*IHHSHK
Trigger: TTTGTGACTATGATGAATCCAGTGGAAGATGGAACT...GCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGTGCTACAAAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp GCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCAGTTCCATCTTCCACTaGATTCATCATAGTCACAAA +
Preference number: 4 (lower is better)
Translates to: ARVGMLGLGFPAMPCYLLSSIFH*IHHSHK
Trigger: TTTGTGACTATGATGAATCCAGTGGAAGATGGAACT...GAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp AGCACTTCCAGCTGCATCAATGTGGCACCAGAGACAATGCTCTGGCTTTGCCGTTTTTTGGAGGGCATCTaGACATTCTGCAGCATTTTA +
Preference number: 4 (lower is better)
Translates to: STSSCINVAPETMLWLCRFLEGI*TFCSIL
Trigger: TAAAATGCTGCAGAATGTCCAGATGCCCTCCAAAAA...ACGGCAAAGCCAGAGCATTGTCTCTGGTGCCACATTGATGCAGCTGGAAGTGCT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000494507.2
CDS-3UTR CCA 90 bp GCACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTTTTTGGAGGGCATCTaGACATTCTGCAGCATTTTA +
Preference number: 4 (lower is better)
Translates to: APGGLRCWQFPLHFFGVFFLEGI*TFCSIL
Trigger: TAAAATGCTGCAGAATGTCCAGATGCCCTCCAAAAA...AAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGTGC
48% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp GTTAGAGCTTCTATCCCGATGACTTCCCAGGTGCCTTTTGTAATAAATGTGCAGCATCGACCAGGGCTTTaGAGATCTGAGCTGACTGCT +
Preference number: 4 (lower is better)
Translates to: VRASIPMTSQVPFVINVQHRPGL*RSELTA
Trigger: AGCAGTCAGCTCAGATCTCCAAAGCCCTGGTCGATG...CTGCACATTTATTACAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTCTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CCA 90 bp TGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACGTATACCACATTGCCTaGAAATCCACTCCAACATCG +
Preference number: 4 (lower is better)
Translates to: WGPALLAVSLTFLWSLFNVYHIA*KSTPTS
Trigger: CGATGTTGGAGTGGATTTCCAGGCAATGTGGTATAC...GTTGAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp GATCCCAGGACCATTGAGGTTACGTACCCTCCATATGACCAGCCCCAAATTGCACTGCTAGCTATTCCATaGTCTTCATCAGTATACCAC +
Preference number: 4 (lower is better)
Translates to: DPRTIEVTYPPYDQPQIALLAIP*SSSVYH
Trigger: GTGGTATACTGATGAAGACCATGGAATAGCTAGCAG...TGCAATTTGGGGCTGGTCATATGGAGGGTACGTAACCTCAATGGTCCTGGGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CCA 90 bp ACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCTGGGTATATATATGTTaGTGTGCTGTGCTGCTAGCT +
Preference number: 4 (lower is better)
Translates to: TWGPALLAVSLTFLWSLFWVYIC*CAVLLA
Trigger: AGCTAGCAGCACAGCACACCAACATATATATACCCA...GAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp TATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGACCAGGACCGGAACATCTGGGTATATATATGTTaGTGTGCTGTGCTGCTAGCT +
Preference number: 4 (lower is better)
Translates to: YHSRCCVEYRGADQDRNIWVYIC*CAVLLA
Trigger: AGCTAGCAGCACAGCACACCAACATATATATACCCA...GATGTTCCGGTCCTGGTCTGCCCCTCTATACTCTACACAGCAGCGTGAATGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CCA 90 bp TGTCTTCCAGGACTCTCAGCCCTTTATCATTCACGCTGCTGTGTAGAGTATAGAGTAGCCTGCTCGTGTTaGTATGCTTGGACTTGGGTT +
Preference number: 4 (lower is better)
Translates to: CLPGLSALYHSRCCVEYRVACSC*YAWTWV
Trigger: AACCCAAGTCCAAGCATACCAACACGAGCAGGCTAC...TCTATACTCTACACAGCAGCGTGAATGATAAAGGGCTGAGAGTCCTGGAAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CCA 90 bp AGCTCTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTCTTTTCAACTGCTGTaGTTTTACTTAGAAGTCAGT +
Preference number: 4 (lower is better)
Translates to: SSSPRGADSSLLVLVCLDSFQLL*FYLEVS
Trigger: ACTGACTTCTAAGTAAAACCACAGCAGTTGAAAAGA...GTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp CTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGTCTTTTCAACTGCTGTaGTTTTACTTAGAAGTCAGT +
Preference number: 4 (lower is better)
Translates to: LLRGELTVACSCWYAWTWSFQLL*FYLEVS
Trigger: ACTGACTTCTAAGTAAAACCACAGCAGTTGAAAAGA...CCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GACTACATGGGCCTGCATACACATCTAATAGTAGAGGATATTTCTTGGATTTATGCGTCTCCTCGGAAGTaGGCGTTCAGAGAAGGAGCG +
Preference number: 4 (lower is better)
Translates to: DYMGLHTHLIVEDISWIYASPRK*AFREGA
Trigger: CGCTCCTTCTCTGAACGCTCACTTCCGAGGAGACGC...ATAAATCCAAGAAATATCCTCTACTATTAGATGTGTATGCAGGCCCATGTAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434918.6
ENST00000678566.1
CDS-3UTR TCA 90 bp GTTAGAGCTTCTATCCCGATGACTTCCCAGGTGCCTTTTGTAATAAATGTGCAGTTTATGACCCACTGGTaGCCATGTGACCCACTGTGT +
Preference number: 4 (lower is better)
Translates to: VRASIPMTSQVPFVINVQFMTHW*PCDPLC
Trigger: ACACAGTGGGTCACATGGTCACCAGTGGGTCATAAA...CTGCACATTTATTACAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTCTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACCTTTCCCCGTCCATGTaGTTCTGTAACTTGGTAAAT +
Preference number: 4 (lower is better)
Translates to: WGPALLAVSLTFLWSLFNLSPSM*FCNLVN
Trigger: ATTTACCAAGTTACAGAATCACATGGACGGGGAAAG...GTTGAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GGCGCTTACACAGCATGCATGGGAAGGAATGATTATCCCATTAAGCCCACTTGTGAGCAGAGTAGGCACTaGAGACTTCCTCTTCATAAA +
Preference number: 4 (lower is better)
Translates to: GAYTACMGRNDYPIKPTCEQSRH*RLPLHK
Trigger: TTTATGAAGAGGAAGTCTTCAGTGCCTACTCTGCTC...ACAAGTGGGCTTAATGGGATAATCATTCCTTCCCATGCATGCTGTGTAAGCGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR TCA 90 bp CTCTCAGCCCTTTATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGACCAGAGTCACAAATATCCATaGCCGAATAGTTCTGAATCC +
Preference number: 4 (lower is better)
Translates to: LSALYHSRCCVEYRGADQSHKYP*PNSSES
Trigger: GGATTCAGAACTATTCGGTCATGGATATTTGTGACT...CTGGTCTGCCCCTCTATACTCTACACAGCAGCGTGAATGATAAAGGGCTGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGACCAGGACCGGAACATCAGTCACAAATATCCATaGCCGAATAGTTCTGAATCC +
Preference number: 4 (lower is better)
Translates to: YHSRCCVEYRGADQDRNISHKYP*PNSSES
Trigger: GGATTCAGAACTATTCGGTCATGGATATTTGTGACT...GATGTTCCGGTCCTGGTCTGCCCCTCTATACTCTACACAGCAGCGTGAATGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CTGCCTTTGGATATGGAACCCGTACAGTCTTTGGGTACTGCAGTGACTCATCAGGGTAAAATGAGGTTCTaGAGGCCTAAATCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: LPLDMEPVQSLGTAVTHQGKMRF*RPKSSN
Trigger: GTTGGAAGATTTAGGCCTTCAGAACCTCATTTTACC...CTGATGAGTCACTGCAGTACCCAAAGACTGTACGGGTTCCATATCCAAAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACCCATCAAGGGTAAAATaGGGTTCTGAAGGCCTAAAT +
Preference number: 4 (lower is better)
Translates to: WGPALLAVSLTFLWSLFNPSRVK*GSEGLN
Trigger: ATTTAGGCCTTCAGAACCTCATTTTACCCTTGATGG...GTTGAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TATAGAGGGGCAGACCAGGACCGGAACATCTCAGCTGATAATACTTCGCCTCTTCGCCTCTTTACTGAATaGCACAGAATAGTACTGACA +
Preference number: 4 (lower is better)
Translates to: YRGADQDRNISADNTSPLRLFTE*HRIVLT
Trigger: TGTCAGTACTATTCTGTGTCATTCAGTAAAGAGGCG...AAGAGGCGAAGTATTATCAGCTGAGATGTTCCGGTCCTGGTCTGCCCCTCTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp ACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCACTTCGCCTCTTTACTaGATGACACAGAATAGTACT +
Preference number: 4 (lower is better)
Translates to: TWGPALLAVSLTFLWSLFTSPLY*MTQNST
Trigger: AGTACTATTCTGTGTCATTCAGTAAAGAGGCGAAGT...GAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CCAGGACTCTCAGCCCTTTATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCACACAAATCCCATTTTTaGAAATTGTCTGGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: PGLSALYHSRCCVEYRGAHKSHF*KLSGCF
Trigger: GAAGCAGCCAGACAATTTTCAAAAATGGGATTTGTG...TGCCCCTCTATACTCTACACAGCAGCGTGAATGATAAAGGGCTGAGAGTCCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GATCCCAGGACCATTGAGGTTACGTACCCTCCATATGACCAGCCCCAAATTGCAAATGGCATGGTATTTTaGGGTGCTAAGGTAAAGAGA +
Preference number: 4 (lower is better)
Translates to: DPRTIEVTYPPYDQPQIANGMVF*GAKVKR
Trigger: TCTCTTTACCTTAGCACCTCAAAATACCATGCCATT...TGCAATTTGGGGCTGGTCATATGGAGGGTACGTAACCTCAATGGTCCTGGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp ACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCGGTAATAATCTGTTGTaGAGACAGAAGTCCCTACTT +
Preference number: 4 (lower is better)
Translates to: TWGPALLAVSLTFLWSLFGNNLL*RQKSLL
Trigger: AAGTAGGGACTTCTGTCTTCACAACAGATTATTACC...GAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCTCCCTAGAAGAGAACAACATTTaGACCAGTCCAGTTAGAAAA +
Preference number: 4 (lower is better)
Translates to: VGMLGLGFPAMPCYLLSLEENNI*TSPVRK
Trigger: TTTTCTAACTGGACTGGTTCAAATGTTGTTCTCTTC...TAGGGAGAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TCAGGGAATCTATGCAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCGTGCCAGTCTGGCTGTaGACAGCTCTTCTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: SGNLCKASIKTIPICCFSVPVWL*TALLRG
Trigger: CCCTCGGAGAAGAGCTGTTCACAGCCAGACTGGCAC...GCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTGCATAGATTCCCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CTCCTGCCTTTGGATATGGAACCCGTACAGTCTTTGGGTACTGCAGTGACTCATTTTAACAGGGCAAGCTaGTGTGTTCACATCTCAGTT +
Preference number: 4 (lower is better)
Translates to: LLPLDMEPVQSLGTAVTHFNRAS*CVHISV
Trigger: AACTGAGATGTGAACACATCAGCTTGCCCTGTTAAA...ATGAGTCACTGCAGTACCCAAAGACTGTACGGGTTCCATATCCAAAGGCAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CCAGGACTCTCAGCCCTTTATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAATCCACTTTGCCATATaGAATGTACTGTTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: PGLSALYHSRCCVEYRGAIHFAI*NVLFSK
Trigger: CTTGGAGAACAGTACATTTCATATGGCAAAGTGGAT...TGCCCCTCTATACTCTACACAGCAGCGTGAATGATAAAGGGCTGAGAGTCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416189.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TTGAATTTCTGTAATGGTCAAGGTTGTCTTCTGGAGTTGGGAGACCCATGTAACGCTTCCGTACTGCTGTaGTGGTGCCTTCAGGAATCT +
Preference number: 4 (lower is better)
Translates to: LNFCNGQGCLLELGDPCNASVLL*WCLQES
Trigger: AGATTCCTGAAGGCACCATCACAGCAGTACGGAAGC...GTTACATGGGTCTCCCAACTCCAGAAGACAACCTTGACCATTACAGAAATTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434918.6
ENST00000678566.1
CDS-3UTR GCA 90 bp GCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCTCTAAGAGAATAAACTaGCCATCAGGAGATATTGAA +
Preference number: 4 (lower is better)
Translates to: ARVGMLGLGFPAMPCYLLSKRIN*PSGDIE
Trigger: TTCAATATCTCCTGATGGGCAGTTTATTCTCTTAGA...GAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp ACACGCCACTTCCCGATCCCAGGACCATTGAGGTTACGTACCCTCCATATGACCTCTAAGAGAATAAACTaGCCATCAGGAGATATTGAA +
Preference number: 4 (lower is better)
Translates to: TRHFPIPGPLRLRTLHMTSKRIN*PSGDIE
Trigger: TTCAATATCTCCTGATGGGCAGTTTATTCTCTTAGA...GGTCATATGGAGGGTACGTAACCTCAATGGTCCTGGGATCGGGAAGTGGCGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp CCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTTCTAAGAGAATAAACTaGCCATCAGGAGATATTGAA +
Preference number: 4 (lower is better)
Translates to: PARVGMLGLGFPAMPCYLSKRIN*PSGDIE
Trigger: TTCAATATCTCCTGATGGGCAGTTTATTCTCTTAGA...AAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TTCTCAGAAAACTGTGCCAGTCTGGCTGTGAACAGCTCTTCTCCGAGGGGAGCTAATTCTTTCTTGTGTTaGCCATGTCACATCACACAA +
Preference number: 4 (lower is better)
Translates to: FSENCASLAVNSSSPRGANSFLC*PCHITQ
Trigger: TTGTGTGATGTGACATGGGCAACACAAGAAAGAATT...AGCTCCCCTCGGAGAAGAGCTGTTCACAGCCAGACTGGCACAGTTTTCTGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp ATTCCACACTTGAACACGCCACTTCCCGATCCCAGGACCATTGAGGTTACGTACATCCTCCTGAGCCACTaGAAAGAAATTCTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: IPHLNTPLPDPRTIEVTYILLSH*KEILSC
Trigger: ACAAGAAAGAATTTCTTTGCAGTGGCTCAGGAGGAT...GTACGTAACCTCAATGGTCCTGGGATCGGGAAGTGGCGTGTTCAAGTGTGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp AGGACCATTGAGGTTACGTACCCTCCATATGACCAGCCCCAAATTGCAATTCGTCTCATTTCAATGTGTTaGCGTGCCACTAAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: RTIEVTYPPYDQPQIAIRLISMC*RATKQF
Trigger: GAACTGCTTAGTGGCACGGCAACACATTGAAATGAG...ACGAATTGCAATTTGGGGCTGGTCATATGGAGGGTACGTAACCTCAATGGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp GGCGCTTACACAGCATGCATGGGAAGGAATGATTATCCCATTAAGCCCACTTGTCTCATTTCAATGTGTTaGCGTGCCACTAAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: GAYTACMGRNDYPIKPTCLISMC*RATKQF
Trigger: GAACTGCTTAGTGGCACGGCAACACATTGAAATGAG...ACAAGTGGGCTTAATGGGATAATCATTCCTTCCCATGCATGCTGTGTAAGCGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR GCA 90 bp TATAGAGGGGCAGACCAGGACCGGAACATCTCAGCTGATAATACTTCGCCTCTTCTTTATCATTCACGCTaGTGTGTAGAGTATAGAGGG +
Preference number: 4 (lower is better)
Translates to: YRGADQDRNISADNTSPLLYHSR*CVEYRG
Trigger: CCCTCTATACTCTACACAGCAGCGTGAATGATAAAG...AAGAGGCGAAGTATTATCAGCTGAGATGTTCCGGTCCTGGTCTGCCCCTCTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp CTCCTGCCTTTGGATATGGAACCCGTACAGTCTTTGGGTACTGCAGTGACTCATCTTTATCATTCACGCTaGTGTGTAGAGTATAGAGGG +
Preference number: 4 (lower is better)
Translates to: LLPLDMEPVQSLGTAVTHLYHSR*CVEYRG
Trigger: CCCTCTATACTCTACACAGCAGCGTGAATGATAAAG...ATGAGTCACTGCAGTACCCAAAGACTGTACGGGTTCCATATCCAAAGGCAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACAATGTTTTCTGTGCTTaGAAGGTAAGTGGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: WGPALLAVSLTFLWSLFNNVFCA*KVSGPV
Trigger: AACTGGGCCACTTACCTTGCAAGCACAGAAAACATT...GTTGAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp ACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCCTTCTGTTGATTGCATaGATGATCTTATCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: TWGPALLAVSLTFLWSLFLLLIA*MILSPW
Trigger: CCAAGGAGATAAGATCATGCATGCAATCAACAGAAG...GAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp GTAGTGATCCCACGGAGCACAGCCCACAGCCTTCCTGATGTACTTAATGCAACTGTGAACGTTATCATCTaGTGTTCCATGAATAAGGAG +
Preference number: 4 (lower is better)
Translates to: VVIPRSTAHSLPDVLNATVNVII*CSMNKE
Trigger: CTCCTTATTCATGGAACAGCAGATGATAACGTTCAC...AGTTGCATTAAGTACATCAGGAAGGCTGTGGGCTGTGCTCCGTGGGATCACTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434918.6
ENST00000678566.1
CDS-3UTR GCA 90 bp TATAGAGGGGCAGACCAGGACCGGAACATCTCAGCTGATAATACTTCGCCTCTTATCAGTATACCACATTaGCTGGAAATCCACTCCAAC +
Preference number: 4 (lower is better)
Translates to: YRGADQDRNISADNTSPLISIPH*LEIHSN
Trigger: GTTGGAGTGGATTTCCAGGCAATGTGGTATACTGAT...AAGAGGCGAAGTATTATCAGCTGAGATGTTCCGGTCCTGGTCTGCCCCTCTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TTTCATCTTTTAACAGGGCAAGCTGATGTGTTCACATCTCAGTTTCAAGCTGCCGAGCTGACAGTAGCCTaGTCGTGTTGGTATGCTTGG +
Preference number: 4 (lower is better)
Translates to: FHLLTGQADVFTSQFQAAELTVA*SCWYAW
Trigger: CCAAGCATACCAACACGAGCAGGCTACTGTCAGCTC...GGCAGCTTGAAACTGAGATGTGAACACATCAGCTTGCCCTGTTAAAAGATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp AGGACCATTGAGGTTACGTACCCTCCATATGACCAGCCCCAAATTGCAATTCGTCTTTCCCATCACCCTTaGTGTGTTTTTGTAGCACCT +
Preference number: 4 (lower is better)
Translates to: RTIEVTYPPYDQPQIAIRLSHHP*CVFVAP
Trigger: AGGTGCTACAAAAACACAGCAAGGGTGATGGGAAAG...ACGAATTGCAATTTGGGGCTGGTCATATGGAGGGTACGTAACCTCAATGGTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp GAGGGGCAGACCAGGACCGGAACATCTCAGCTGATAATACTTCGCCTCTTTACTAGGATAATCCCTCTTTaGCTATCCATGGAAACAGAA +
Preference number: 4 (lower is better)
Translates to: EGQTRTGTSQLIILRLFTRIIPL*LSMETE
Trigger: TTCTGTTTCCATGGATAGGCAAAGAGGGATTATCCT...AGTAAAGAGGCGAAGTATTATCAGCTGAGATGTTCCGGTCCTGGTCTGCCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416189.6
CDS-3UTR GCA 90 bp GGCGCTTACACAGCATGCATGGGAAGGAATGATTATCCCATTAAGCCCACTTGTGGCGCTTACACAGCATaGATGGGAAGGAATGATTAT +
Preference number: 4 (lower is better)
Translates to: GAYTACMGRNDYPIKPTCGAYTA*MGRNDY
Trigger: ATAATCATTCCTTCCCATGCATGCTGTGTAAGCGCC...ACAAGTGGGCTTAATGGGATAATCATTCCTTCCCATGCATGCTGTGTAAGCGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR GCA 90 bp TGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACCCAACAGTTCAGGCATaGTCAAAACATCATTCACTG +
Preference number: 4 (lower is better)
Translates to: WGPALLAVSLTFLWSLFNPTVQA*SKHHSL
Trigger: CAGTGAATGATGTTTTGAGCATGCCTGAACTGTTGG...GTTGAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000678668.1
CDS-3UTR CCA 90 bp TATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGACCAGGACCGGAACATCCCACTGTGTGTTGTTTaGAATCCTCTCTTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: YHSRCCVEYRGADQDRNIPLCVV*NPLFCN
Trigger: ATTACAGAAGAGAGGATTCCAAACAACACACAGTGG...GATGTTCCGGTCCTGGTCTGCCCCTCTATACTCTACACAGCAGCGTGAATGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CCA 90 bp GTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCTCCCTAGGAGTATTCAATAAGTaGGACTTCTGTGTCGTTAAA +
Preference number: 4 (lower is better)
Translates to: VGMLGLGFPAMPCYLLSLGVFNK*DFCVVK
Trigger: TTTAACGACACAGAAGTCCCACTTATTGAATACTCC...TAGGGAGAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp TCTTACTCTGTAATGGTCAAGGTTGTCTTCTGGAGTTGGGAGACCCATGTAACGTCCTGCCTTTGGATATaGAACCCGTACAGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: SYSVMVKVVFWSWETHVTSCLWI*NPYSLW
Trigger: CCAAAGACTGTACGGGTTCCATATCCAAAGGCAGGA...CGTTACATGGGTCTCCCAACTCCAGAAGACAACCTTGACCATTACAGAGTAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494507.2
CDS-3UTR CCA 90 bp CAGTGCCGACTCCACAGCATCTCTGAGGAGCTTTTCCTTCAGTCCCCAAGAAGAAGTTCCATCTTCCACTaGATTCATCATAGTCACAAA +
Preference number: 4 (lower is better)
Translates to: QCRLHSISEELFLQSPRRSSIFH*IHHSHK
Trigger: TTTGTGACTATGATGAATCCAGTGGAAGATGGAACT...TCTTCTTGGGGACTGAAGGAAAAGCTCCTCAGAGATGCTGTGGAGTCGGCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416189.6
CDS-3UTR CCA 90 bp GCACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTAGTATAGATAATCACTaGTTAGAGCTTCTATCCCGA +
Preference number: 4 (lower is better)
Translates to: APGGLRCWQFPLHFFGVFSIDNH*LELLSR
Trigger: TCGGGATAGAAGCTCTAACCAGTGATTATCTATACT...AAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp GTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCTCCCTAAGTATAGATAATCACTaGTTAGAGCTTCTATCCCGA +
Preference number: 4 (lower is better)
Translates to: VGMLGLGFPAMPCYLLSLSIDNH*LELLSR
Trigger: TCGGGATAGAAGCTCTAACCAGTGATTATCTATACT...TAGGGAGAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp CAGGAGAGCAGTGTCTTGATACTCCCAGCATATGCGATATTGTGCTTCTTAACCGTTGTCTTCTGGAGTTaGGAGACCCATGTAACGTTC +
Preference number: 4 (lower is better)
Translates to: QESSVLILPAYAILCFLTVVFWS*ETHVTF
Trigger: GAACGTTACATGGGTCTCCCAACTCCAGAAGACAAC...GGTTAAGAAGCACAATATCGCATATGCTGGGAGTATCAAGACACTGCTCTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR CCA 90 bp TCACTGGTTAGAGCTTCTATCCCGATGACTTCCCAGGTGCCTTTTGTAATAAATCATCGACCAGGGCTTTaGAGATCTGAGCTGACTGCT +
Preference number: 4 (lower is better)
Translates to: SLVRASIPMTSQVPFVINHRPGL*RSELTA
Trigger: AGCAGTCAGCTCAGATCTCCAAAGCCCTGGTCGATG...ATTTATTACAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTCTAACCAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CCA 90 bp ACACAAGTAGTGATCCCACGGAGCACAGCCCACAGCCTTCCTGATGTACTTAATTGGGTATATATATGTTaGTGTGCTGTGCTGCTAGCT +
Preference number: 4 (lower is better)
Translates to: TQVVIPRSTAHSLPDVLNWVYIC*CAVLLA
Trigger: AGCTAGCAGCACAGCACACCAACATATATATACCCA...ATTAAGTACATCAGGAAGGCTGTGGGCTGTGCTCCGTGGGATCACTACTTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434918.6
ENST00000678566.1
CDS-3UTR CCA 90 bp TGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACTGGGTATATATATGTTaGTGTGCTGTGCTGCTAGCT +
Preference number: 4 (lower is better)
Translates to: WGPALLAVSLTFLWSLFNWVYIC*CAVLLA
Trigger: AGCTAGCAGCACAGCACACCAACATATATATACCCA...GTTGAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp GCACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTATGAAGTGGCTCATGTaGGTATATATATGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: APGGLRCWQFPLHFFGVFMKWLM*VYICWC
Trigger: ACACCAACATATATATACCCACATGAGCCACTTCAT...AAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp TTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACTGCTGTGGTTTTTGGTATGCTTGGACTTaGGTTCCCAGCCATGCCCTG +
Preference number: 4 (lower is better)
Translates to: LLAVSLTFLWSLFNCCGFWYAWT*VPSHAL
Trigger: CAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCA...AAAACCACAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp GAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATTCTTTTCAACTGCTGTaGTTTTACTTAGAAGTCAGT +
Preference number: 4 (lower is better)
Translates to: ELTVACSCWYAWTWVPSHSFQLL*FYLEVS
Trigger: ACTGACTTCTAAGTAAAACCACAGCAGTTGAAAAGA...ATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp CCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTTCTTTTCAACTGCTGTaGTTTTACTTAGAAGTCAGT +
Preference number: 4 (lower is better)
Translates to: PARVGMLGLGFPAMPCYLSFQLL*FYLEVS
Trigger: ACTGACTTCTAAGTAAAACCACAGCAGTTGAAAAGA...AAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp TGTTTTTGTAGCACCTATAGCCATAACTGGCACCTGGGGGCCTGCGTTGCTGGCTCTTTTCAACTGCTGTaGTTTTACTTAGAAGTCAGT +
Preference number: 4 (lower is better)
Translates to: CFCSTYSHNWHLGACVAGSFQLL*FYLEVS
Trigger: ACTGACTTCTAAGTAAAACCACAGCAGTTGAAAAGA...GCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGTGCTACAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp ATTTACAATGCTTTCCCATCACCCTTGCTGTGTTTTTGTAGCACCTATAGCCATACCTATAGCCATAACTaGCACCTGGGGGCCTGCGTT +
Preference number: 4 (lower is better)
Translates to: IYNAFPSPLLCFCSTYSHTYSHN*HLGACV
Trigger: AACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGT...ATGGCTATAGGTGCTACAAAAACACAGCAAGGGTGATGGGAAAGCATTGTAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp AGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACTGCTGTGGTTTTACTTAGAAGTCAGAGGGTGGCCTTaGGGCTTCCGCCTAAGGGGA +
Preference number: 4 (lower is better)
Translates to: SFPYISLESFQLLWFYLEVRGWP*GFRLRG
Trigger: TCCCCTTAGGCGGAAGCCCCAAGGCCACCCTCTGAC...TTCTAAGTAAAACCACAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676479.1
CDS-3UTR CCA 90 bp GGAGAGCAGTGTCTTGATACTCCCAGCATATGCGATATTGTGCTTCTTAACCCCGCATTACTCTGTGCATaGCTGAAGGATACCACTCTT +
Preference number: 4 (lower is better)
Translates to: GEQCLDTPSICDIVLLNPALLCA*LKDTTL
Trigger: AAGAGTGGTATCCTTCAGCCATGCACAGAGTAATGC...GGGGTTAAGAAGCACAATATCGCATATGCTGGGAGTATCAAGACACTGCTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR CCA 90 bp AGGGAATCTATGCAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAGGTGTCTGTCAGAGGGTaGCCTTGGGGCTTCCGCCTA +
Preference number: 4 (lower is better)
Translates to: RESMQSLHKNNSYLLFQQVSVRG*PWGFRL
Trigger: TAGGCGGAAGCCCCAAGGCCACCCTCTGACAGACAC...CTGCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTGCATAGATTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676479.1
CDS-3UTR TCA 90 bp ATGGAACCCGTACAGTCTTTGGGTACTGCAGTGACTCATCAGAGTAGAAGGAGTGTTCTCCAAGAAAACTaGGCTGTTTCCATATTCAGC +
Preference number: 4 (lower is better)
Translates to: MEPVQSLGTAVTHQSRRSVLQEN*AVSIFS
Trigger: GCTGAATATGGAAACAGCTCAGTTTTCTTGGAGAAC...ACTCCTTCTACTCTGATGAGTCACTGCAGTACCCAAAGACTGTACGGGTTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CTGCTAAAAGAATTAGCCCAGAAAGAGGAAACTAGACCCCACCAGCAACTTCCCGTTCTCCAAGAAAACTaGGCTGTTTCCATATTCAGC +
Preference number: 4 (lower is better)
Translates to: LLKELAQKEETRPHQQLPVLQEN*AVSIFS
Trigger: GCTGAATATGGAAACAGCTCAGTTTTCTTGGAGAAC...GGGAAGTTGCTGGTGGGGTCTAGTTTCCTCTTTCTGGGCTAATTCTTTTAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR TCA 90 bp ACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCATCATAAATGTCATATaGAGCTGTGTAGGAATGCCT +
Preference number: 4 (lower is better)
Translates to: TWGPALLAVSLTFLWSLFIINVI*SCVGMP
Trigger: AGGCATTCCTACACAGCTTCATATGACATTTATGAT...GAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
CDS-3UTR TCA 90 bp ATTTACAATGCTTTCCCATCACCCTTGCTGTGTTTTTGTAGCACCTATAGCCATCCACTGGTGACCATGTaGCCCACTGTGTGTTGTTTG +
Preference number: 4 (lower is better)
Translates to: IYNAFPSPLLCFCSTYSHPLVTM*PTVCCL
Trigger: CAAACAACACACAGTGGGTCACATGGTCACCAGTGG...ATGGCTATAGGTGCTACAAAAACACAGCAAGGGTGATGGGAAAGCATTGTAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CAGTGTCTGCTTTTTGACTACATGGGCCTGCATACACATCTAATAGTAGAGGATTTTATGACCCACTGGTaGCCATGTGACCCACTGTGT +
Preference number: 4 (lower is better)
Translates to: QCLLFDYMGLHTHLIVEDFMTHW*PCDPLC
Trigger: ACACAGTGGGTCACATGGTCACCAGTGGGTCATAAA...ATCCTCTACTATTAGATGTGTATGCAGGCCCATGTAGTCAAAAAGCAGACACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CTGCTAAAAGAATTAGCCCAGAAAGAGGAAACTAGACCCCACCAGCAACTTCCCCTTTCCCCGTCCATGTaGTTCTGTAACTTGGTAAAT +
Preference number: 4 (lower is better)
Translates to: LLKELAQKEETRPHQQLPLSPSM*FCNLVN
Trigger: ATTTACCAAGTTACAGAATCACATGGACGGGGAAAG...GGGAAGTTGCTGGTGGGGTCTAGTTTCCTCTTTCTGGGCTAATTCTTTTAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR TCA 90 bp CAGGAGAGCAGTGTCTTGATACTCCCAGCATATGCGATATTGTGCTTCTTAACCAGTTCTGAATCCTCCTaGGCCACTGCAAAGAAATTC +
Preference number: 4 (lower is better)
Translates to: QESSVLILPAYAILCFLTSSESS*ATAKKF
Trigger: GAATTTCTTTGCAGTGGCTCAGGAGGATTCAGAACT...GGTTAAGAAGCACAATATCGCATATGCTGGGAGTATCAAGACACTGCTCTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR TCA 90 bp CTCCTGCCTTTGGATATGGAACCCGTACAGTCTTTGGGTACTGCAGTGACTCATAGTCACAAATATCCATaGCCGAATAGTTCTGAATCC +
Preference number: 4 (lower is better)
Translates to: LLPLDMEPVQSLGTAVTHSHKYP*PNSSES
Trigger: GGATTCAGAACTATTCGGTCATGGATATTTGTGACT...ATGAGTCACTGCAGTACCCAAAGACTGTACGGGTTCCATATCCAAAGGCAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACAGTCACAAATATCCATaGCCGAATAGTTCTGAATCC +
Preference number: 4 (lower is better)
Translates to: WGPALLAVSLTFLWSLFNSHKYP*PNSSES
Trigger: GGATTCAGAACTATTCGGTCATGGATATTTGTGACT...GTTGAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp AGGACCATTGAGGTTACGTACCCTCCATATGACCAGCCCCAAATTGCAATTCGTCCATCAAGGGTAAAATaGGGTTCTGAAGGCCTAAAT +
Preference number: 4 (lower is better)
Translates to: RTIEVTYPPYDQPQIAIRPSRVK*GSEGLN
Trigger: ATTTAGGCCTTCAGAACCTCATTTTACCCTTGATGG...ACGAATTGCAATTTGGGGCTGGTCATATGGAGGGTACGTAACCTCAATGGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CTGCTAAAAGAATTAGCCCAGAAAGAGGAAACTAGACCCCACCAGCAACTTCCCCCATCAAGGGTAAAATaGGGTTCTGAAGGCCTAAAT +
Preference number: 4 (lower is better)
Translates to: LLKELAQKEETRPHQQLPPSRVK*GSEGLN
Trigger: ATTTAGGCCTTCAGAACCTCATTTTACCCTTGATGG...GGGAAGTTGCTGGTGGGGTCTAGTTTCCTCTTTCTGGGCTAATTCTTTTAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR TCA 90 bp GACATAATACGTAGAAATATCCTCTGCATAGACAACAACAGCTCTAGCCATTCCGAGCTTCTATCCCGATaGCTTCCCAGGTGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: DIIRRNILCIDNNSSSHSELLSR*LPRCLL
Trigger: CAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTC...GGAATGGCTAGAGCTGTTGTTGTCTATGCAGAGGATATTTCTACGTATTATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR TCA 90 bp CTGCTAAAAGAATTAGCCCAGAAAGAGGAAACTAGACCCCACCAGCAACTTCCCGATTCAGCTCACAACTaGGGCATGTCACTTTTGTAT +
Preference number: 4 (lower is better)
Translates to: LLKELAQKEETRPHQQLPDSAHN*GMSLLY
Trigger: ATACAAAAGTGACATGCCTCAGTTGTGAGCTGAATC...GGGAAGTTGCTGGTGGGGTCTAGTTTCCTCTTTCTGGGCTAATTCTTTTAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR TCA 90 bp CCCACAGCCTTCCTGATGTACTTAATGCAACTCCAGAGAAAATGGATGCTTCCGCGCCTCTTTACTGAATaGCACAGAATAGTACTGACA +
Preference number: 4 (lower is better)
Translates to: PTAFLMYLMQLQRKWMLPRLFTE*HRIVLT
Trigger: TGTCAGTACTATTCTGTGTCATTCAGTAAAGAGGCG...CGGAAGCATCCATTTTCTCTGGAGTTGCATTAAGTACATCAGGAAGGCTGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434918.6
ENST00000678566.1
CDS-3UTR TCA 90 bp CTGCCTTTGGATATGGAACCCGTACAGTCTTTGGGTACTGCAGTGACTCATCAGACTTCGCCTCTTTACTaGATGACACAGAATAGTACT +
Preference number: 4 (lower is better)
Translates to: LPLDMEPVQSLGTAVTHQTSPLY*MTQNST
Trigger: AGTACTATTCTGTGTCATTCAGTAAAGAGGCGAAGT...CTGATGAGTCACTGCAGTACCCAAAGACTGTACGGGTTCCATATCCAAAGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TATAGAGGGGCAGACCAGGACCGGAACATCTCAGCTGATAATACTTCGCCTCTTACTTCGCCTCTTTACTaGATGACACAGAATAGTACT +
Preference number: 4 (lower is better)
Translates to: YRGADQDRNISADNTSPLTSPLY*MTQNST
Trigger: AGTACTATTCTGTGTCATTCAGTAAAGAGGCGAAGT...AAGAGGCGAAGTATTATCAGCTGAGATGTTCCGGTCCTGGTCTGCCCCTCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CCTCCATATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTACAGTGTCTGCTTTTTaGCTACATGGGCCTGCATAC +
Preference number: 4 (lower is better)
Translates to: PPYDQPQIAIRLLSTNPITVSAF*LHGPAY
Trigger: GTATGCAGGCCCATGTAGTCAAAAAGCAGACACTGT...AATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATATGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CAAAGGAGACTAAAAAGTAGCCAAGGCAGGGAGCATTTCAAGAAGGAGAGAAAGACAGTGTCTGCTTTTTaGCTACATGGGCCTGCATAC +
Preference number: 4 (lower is better)
Translates to: QRRLKSSQGREHFKKERKTVSAF*LHGPAY
Trigger: GTATGCAGGCCCATGTAGTCAAAAAGCAGACACTGT...CTTTCTCTCCTTCTTGAAATGCTCCCTGCCTTGGCTACTTTTTAGTCTCCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000676479.1
CDS-3UTR TCA 90 bp CTCATCAGAGTAGAAGGAGTATTCAATAAGTGGGACTTCTGTGTCGTTAAATTGCGGCTATTCCACACTTaGACACGCCACTTCCCGATC +
Preference number: 4 (lower is better)
Translates to: LIRVEGVFNKWDFCVVKLRLFHT*TRHFPI
Trigger: GATCGGGAAGTGGCGTGTTCAAGTGTGGAATAGCCG...CAATTTAACGACACAGAAGTCCCACTTATTGAATACTCCTTCTACTCTGATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GAGGGGCAGACCAGGACCGGAACATCTCAGCTGATAATACTTCGCCTCTTTACTAGAAACATTGTTTTATaGAGTGGCTCATGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: EGQTRTGTSQLIILRLFTRNIVL*SGSCGY
Trigger: ATACCCACATGAGCCACTTCATAAAACAATGTTTCT...AGTAAAGAGGCGAAGTATTATCAGCTGAGATGTTCCGGTCCTGGTCTGCCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CTCTCAGCCCTTTATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGACCAGAGAAACATTGTTTTATaGAGTGGCTCATGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: LSALYHSRCCVEYRGADQRNIVL*SGSCGY
Trigger: ATACCCACATGAGCCACTTCATAAAACAATGTTTCT...CTGGTCTGCCCCTCTATACTCTACACAGCAGCGTGAATGATAAAGGGCTGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp ACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAGAAACATTGTTTTATaGAGTGGCTCATGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: TWGPALLAVSLTFLWSLFRNIVL*SGSCGY
Trigger: ATACCCACATGAGCCACTTCATAAAACAATGTTTCT...GAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp CCAGGACTCTCAGCCCTTTATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAATTGTTCCAAACATATaGCAATTTATGACCCACTGG +
Preference number: 4 (lower is better)
Translates to: PGLSALYHSRCCVEYRGAIVPNI*QFMTHW
Trigger: CCAGTGGGTCATAAATTGGCATATGTTTGGAACAAT...TGCCCCTCTATACTCTACACAGCAGCGTGAATGATAAAGGGCTGAGAGTCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGACCAGGACCGGAACATCAATTCTTTCTTGTGTTaGCCATGTCACATCACACAA +
Preference number: 4 (lower is better)
Translates to: YHSRCCVEYRGADQDRNINSFLC*PCHITQ
Trigger: TTGTGTGATGTGACATGGGCAACACAAGAAAGAATT...GATGTTCCGGTCCTGGTCTGCCCCTCTATACTCTACACAGCAGCGTGAATGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TATAGAGGGGCAGACCAGGACCGGAACATCTCAGCTGATAATACTTCGCCTCTTATCCTCCTGAGCCACTaGAAAGAAATTCTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: YRGADQDRNISADNTSPLILLSH*KEILSC
Trigger: ACAAGAAAGAATTTCTTTGCAGTGGCTCAGGAGGAT...AAGAGGCGAAGTATTATCAGCTGAGATGTTCCGGTCCTGGTCTGCCCCTCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TATAGAGGGGCAGACCAGGACCGGAACATCTCAGCTGATAATACTTCGCCTCTTCTTCTGTTGATTGCATaGATGATCTTATCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: YRGADQDRNISADNTSPLLLLIA*MILSPW
Trigger: CCAAGGAGATAAGATCATGCATGCAATCAACAGAAG...AAGAGGCGAAGTATTATCAGCTGAGATGTTCCGGTCCTGGTCTGCCCCTCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TATAGAGGGGCAGACCAGGACCGGAACATCTCAGCTGATAATACTTCGCCTCTTGTGAACGTTATCATCTaGTGTTCCATGAATAAGGAG +
Preference number: 4 (lower is better)
Translates to: YRGADQDRNISADNTSPLVNVII*CSMNKE
Trigger: CTCCTTATTCATGGAACAGCAGATGATAACGTTCAC...AAGAGGCGAAGTATTATCAGCTGAGATGTTCCGGTCCTGGTCTGCCCCTCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp ATTTACAATGCTTTCCCATCACCCTTGCTGTGTTTTTGTAGCACCTATAGCCATCTGCTCGTGTTGGTATaGTTGGACTTGGGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: IYNAFPSPLLCFCSTYSHLLVLV*LDLGSQ
Trigger: CTGGGAACCCAAGTCCAAGCATACCAACACGAGCAG...ATGGCTATAGGTGCTACAAAAACACAGCAAGGGTGATGGGAAAGCATTGTAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp AAAGAATTAGCCCAGAAAGAGGAAACTAGACCCCACCAGCAACTTCCCTCCCCTGATACTCCCAGCATATaGGATATTGTGCTTCTTAAC +
Preference number: 4 (lower is better)
Translates to: KELAQKEETRPHQQLPSPDTPSI*DIVLLN
Trigger: GTTAAGAAGCACAATATCGCATATGCTGGGAGTATC...AGGGGAGGGAAGTTGCTGGTGGGGTCTAGTTTCCTCTTTCTGGGCTAATTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR CCA 90 bp CAGTGTCTGCTTTTTGACTACATGGGCCTGCATACACATCTAATAGTAGAGGATCACAGCTCCTGCCTTTaGATATGGAACCCGTACAGT +
Preference number: 4 (lower is better)
Translates to: QCLLFDYMGLHTHLIVEDHSSCL*IWNPYS
Trigger: ACTGTACGGGTTCCATATCCAAAGGCAGGAGCTGTG...ATCCTCTACTATTAGATGTGTATGCAGGCCCATGTAGTCAAAAAGCAGACACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CCA 90 bp TATAGAGGGGCAGACCAGGACCGGAACATCTCAGCTGATAATACTTCGCCTCTTAAAGAACTTTACAGTTaGATTCACAGCTCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: YRGADQDRNISADNTSPLKELYS*IHSSCL
Trigger: AAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTT...AAGAGGCGAAGTATTATCAGCTGAGATGTTCCGGTCCTGGTCTGCCCCTCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CCA 90 bp CTCCAGAGAAAATGGATGCTTCCGTACTGCTGTGATGGTGCCTTCAGGAATCTGAAAGAACTTTACAGTTaGATTCACAGCTCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: LQRKWMLPYCCDGAFRNLKELYS*IHSSCL
Trigger: AAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTT...CAGATTCCTGAAGGCACCATCACAGCAGTACGGAAGCATCCATTTTCTCTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434918.6
ENST00000678566.1
CDS-3UTR CCA 90 bp GATCCCAGGACCATTGAGGTTACGTACCCTCCATATGACCAGCCCCAAATTGCAAGTATAGATAATCACTaGTTAGAGCTTCTATCCCGA +
Preference number: 4 (lower is better)
Translates to: DPRTIEVTYPPYDQPQIASIDNH*LELLSR
Trigger: TCGGGATAGAAGCTCTAACCAGTGATTATCTATACT...TGCAATTTGGGGCTGGTCATATGGAGGGTACGTAACCTCAATGGTCCTGGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CCA 90 bp CCTCCATATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTGTTGTCTTCTGGAGTTaGGAGACCCATGTAACGTTC +
Preference number: 4 (lower is better)
Translates to: PPYDQPQIAIRLLSTNPIVVFWS*ETHVTF
Trigger: GAACGTTACATGGGTCTCCCAACTCCAGAAGACAAC...AATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATATGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CCA 90 bp TTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACTGCTGTGGTTTTCATCGACCAGGGCTTTaGAGATCTGAGCTGACTGCT +
Preference number: 4 (lower is better)
Translates to: LLAVSLTFLWSLFNCCGFHRPGL*RSELTA
Trigger: AGCAGTCAGCTCAGATCTCCAAAGCCCTGGTCGATG...AAAACCACAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp ATGGAACCCGTACAGTCTTTGGGTACTGCAGTGACTCATCAGAGTAGAAGGAGTCTGCTAGCTATTCCATaGTCTTCATCAGTATACCAC +
Preference number: 4 (lower is better)
Translates to: MEPVQSLGTAVTHQSRRSLLAIP*SSSVYH
Trigger: GTGGTATACTGATGAAGACCATGGAATAGCTAGCAG...ACTCCTTCTACTCTGATGAGTCACTGCAGTACCCAAAGACTGTACGGGTTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR CCA 90 bp GATCCCAGGACCATTGAGGTTACGTACCCTCCATATGACCAGCCCCAAATTGCAATGAAGTGGCTCATGTaGGTATATATATGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: DPRTIEVTYPPYDQPQIAMKWLM*VYICWC
Trigger: ACACCAACATATATATACCCACATGAGCCACTTCAT...TGCAATTTGGGGCTGGTCATATGGAGGGTACGTAACCTCAATGGTCCTGGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CCA 90 bp ACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCATGAAGTGGCTCATGTaGGTATATATATGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: TWGPALLAVSLTFLWSLFMKWLM*VYICWC
Trigger: ACACCAACATATATATACCCACATGAGCCACTTCAT...GAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp CTCATCAGAGTAGAAGGAGTATTCAATAAGTGGGACTTCTGTGTCGTTAAATTGTGGTATGCTTGGACTTaGGTTCCCAGCCATGCCCTG +
Preference number: 4 (lower is better)
Translates to: LIRVEGVFNKWDFCVVKLWYAWT*VPSHAL
Trigger: CAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCA...CAATTTAACGACACAGAAGTCCCACTTATTGAATACTCCTTCTACTCTGATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR CCA 90 bp GAGGGGCAGACCAGGACCGGAACATCTCAGCTGATAATACTTCGCCTCTTTACTTTACAGTCCAGTGTATaGCACACTTTAAGCTGTAAA +
Preference number: 4 (lower is better)
Translates to: EGQTRTGTSQLIILRLFTLQSSV*HTLSCK
Trigger: TTTACAGCTTAAAGTGTGCCATACACTGGACTGTAA...AGTAAAGAGGCGAAGTATTATCAGCTGAGATGTTCCGGTCCTGGTCTGCCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416189.6
CDS-3UTR CCA 90 bp TCAGGGAATCTATGCAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCGCCATTTGGGGAGTTTaGCGAAGAGGTCCCCACAGC +
Preference number: 4 (lower is better)
Translates to: SGNLCKASIKTIPICCFSAIWGV*RRGPHS
Trigger: GCTGTGGGGACCTCTTCGCCAAACTCCCCAAATGGC...GCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTGCATAGATTCCCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000676479.1
CDS-3UTR CCA 90 bp TTGAATTTCTGTAATGGTCAAGGTTGTCTTCTGGAGTTGGGAGACCCATGTAACAGCTTTTGGGCCATTTaGGGAGTTTGGCGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: LNFCNGQGCLLELGDPCNSFWAI*GVWRRG
Trigger: ACCTCTTCGCCAAACTCCCCAAATGGCCCAAAAGCT...GTTACATGGGTCTCCCAACTCCAGAAGACAACCTTGACCATTACAGAAATTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676479.1
CDS-3UTR CCA 90 bp AGGACCATTGAGGTTACGTACCCTCCATATGACCAGCCCCAAATTGCAATTCGTAGGCAACCAGCCTGTTaGATGCTATTCAGTGATTTA +
Preference number: 4 (lower is better)
Translates to: RTIEVTYPPYDQPQIAIRRQPAC*MLFSDL
Trigger: TAAATCACTGAATAGCATCCAACAGGCTGGTTGCCT...ACGAATTGCAATTTGGGGCTGGTCATATGGAGGGTACGTAACCTCAATGGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494507.2
CDS-3UTR CCA 90 bp ATTCCACACTTGAACACGCCACTTCCCGATCCCAGGACCATTGAGGTTACGTACGAATCAGCAAAGTTTTaGAATGATCAAAGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: IPHLNTPLPDPRTIEVTYESAKF*NDQSAR
Trigger: TCTGGCACTTTGATCATTCCAAAACTTTGCTGATTC...GTACGTAACCTCAATGGTCCTGGGATCGGGAAGTGGCGTGTTCAAGTGTGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494507.2
CDS-3UTR CCA 90 bp CTGCTAAAAGAATTAGCCCAGAAAGAGGAAACTAGACCCCACCAGCAACTTCCCTTCTATACCATTGCCTaGAAATCCACTCCAACATCG +
Preference number: 4 (lower is better)
Translates to: LLKELAQKEETRPHQQLPFYTIA*KSTPTS
Trigger: CGATGTTGGAGTGGATTTCCAGGCAATGGTATAGAA...GGGAAGTTGCTGGTGGGGTCTAGTTTCCTCTTTCTGGGCTAATTCTTTTAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR CCA 90 bp GGCGCTTACACAGCATGCATGGGAAGGAATGATTATCCCATTAAGCCCACTTGTCTTACACAGCATGCATaGGAAGGAATGATTATCCCA +
Preference number: 4 (lower is better)
Translates to: GAYTACMGRNDYPIKPTCLTQHA*EGMIIP
Trigger: TGGGATAATCATTCCTTCCCATGCATGCTGTGTAAG...ACAAGTGGGCTTAATGGGATAATCATTCCTTCCCATGCATGCTGTGTAAGCGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR TCA 90 bp TGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACATCATAAATGTCATATaGAGCTGTGTAGGAATGCCT +
Preference number: 4 (lower is better)
Translates to: WGPALLAVSLTFLWSLFNIINVI*SCVGMP
Trigger: AGGCATTCCTACACAGCTTCATATGACATTTATGAT...GTTGAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
CDS-3UTR TCA 90 bp CTGCTAGCTATTCCATGGTCTTCATCAGTATACCACATTGCCTGGAAATCCACTACATATGCCAATTTATaGCCCACTGGTGACCATGTG +
Preference number: 4 (lower is better)
Translates to: LLAIPWSSSVYHIAWKSTTYANL*PTGDHV
Trigger: CACATGGTCACCAGTGGGTCATAAATTGGCATATGT...AGTGGATTTCCAGGCAATGTGGTATACTGATGAAGACCATGGAATAGCTAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp ATAAATTCTGTAATGGTCAAGGTTGTCTTCTGGAGTTGGGAGACCCATGTAACGCTTTGGGTACTGCAGTaGCTCATCAGAGTAGAAGGA +
Preference number: 4 (lower is better)
Translates to: INSVMVKVVFWSWETHVTLWVLQ*LIRVEG
Trigger: TCCTTCTACTCTGATGAGTCACTGCAGTACCCAAAG...CGTTACATGGGTCTCCCAACTCCAGAAGACAACCTTGACCATTACAGAATTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416189.6
CDS-3UTR TCA 90 bp TCACTGGTTAGAGCTTCTATCCCGATGACTTCCCAGGTGCCTTTTGTAATAAATCTTTGGGTACTGCAGTaGCTCATCAGAGTAGAAGGA +
Preference number: 4 (lower is better)
Translates to: SLVRASIPMTSQVPFVINLWVLQ*LIRVEG
Trigger: TCCTTCTACTCTGATGAGTCACTGCAGTACCCAAAG...ATTTATTACAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTCTAACCAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CAGTGTCTGCTTTTTGACTACATGGGCCTGCATACACATCTAATAGTAGAGGATCTTTGGGTACTGCAGTaGCTCATCAGAGTAGAAGGA +
Preference number: 4 (lower is better)
Translates to: QCLLFDYMGLHTHLIVEDLWVLQ*LIRVEG
Trigger: TCCTTCTACTCTGATGAGTCACTGCAGTACCCAAAG...ATCCTCTACTATTAGATGTGTATGCAGGCCCATGTAGTCAAAAAGCAGACACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GGCGCTTACACAGCATGCATGGGAAGGAATGATTATCCCATTAAGCCCACTTGTAGTCACAAATATCCATaGCCGAATAGTTCTGAATCC +
Preference number: 4 (lower is better)
Translates to: GAYTACMGRNDYPIKPTCSHKYP*PNSSES
Trigger: GGATTCAGAACTATTCGGTCATGGATATTTGTGACT...ACAAGTGGGCTTAATGGGATAATCATTCCTTCCCATGCATGCTGTGTAAGCGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR TCA 90 bp TTTACAACAAAGAACTTTACAGTTGGATTCACAGCTCCTGCCTTTGGATATGGAGAGCTTCTATCCCGATaGCTTCCCAGGTGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: FTTKNFTVGFTAPAFGYGELLSR*LPRCLL
Trigger: CAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTC...TCCATATCCAAAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTTGTTGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TGTCTTCCAGGACTCTCAGCCCTTTATCATTCACGCTGCTGTGTAGAGTATAGAGATTCAGCTCACAACTaGGGCATGTCACTTTTGTAT +
Preference number: 4 (lower is better)
Translates to: CLPGLSALYHSRCCVEYRDSAHN*GMSLLY
Trigger: ATACAAAAGTGACATGCCTCAGTTGTGAGCTGAATC...TCTATACTCTACACAGCAGCGTGAATGATAAAGGGCTGAGAGTCCTGGAAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GGCGCTTACACAGCATGCATGGGAAGGAATGATTATCCCATTAAGCCCACTTGTACTTCGCCTCTTTACTaGATGACACAGAATAGTACT +
Preference number: 4 (lower is better)
Translates to: GAYTACMGRNDYPIKPTCTSPLY*MTQNST
Trigger: AGTACTATTCTGTGTCATTCAGTAAAGAGGCGAAGT...ACAAGTGGGCTTAATGGGATAATCATTCCTTCCCATGCATGCTGTGTAAGCGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR TCA 90 bp GGAGAGCAGTGTCTTGATACTCCCAGCATATGCGATATTGTGCTTCTTAACCCCCACAAATCCCATTTTTaGAAATTGTCTGGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: GEQCLDTPSICDIVLLNPHKSHF*KLSGCF
Trigger: GAAGCAGCCAGACAATTTTCAAAAATGGGATTTGTG...GGGGTTAAGAAGCACAATATCGCATATGCTGGGAGTATCAAGACACTGCTCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR TCA 90 bp TTTACAACAAAGAACTTTACAGTTGGATTCACAGCTCCTGCCTTTGGATATGGACGATCCCAGGACCATTaGGGTTACGTACCCTCCATA +
Preference number: 4 (lower is better)
Translates to: FTTKNFTVGFTAPAFGYGRSQDH*GYVPSI
Trigger: TATGGAGGGTACGTAACCTCAATGGTCCTGGGATCG...TCCATATCCAAAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTTGTTGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CTCATCAGAGTAGAAGGAGTATTCAATAAGTGGGACTTCTGTGTCGTTAAATTGCGATCCCAGGACCATTaGGGTTACGTACCCTCCATA +
Preference number: 4 (lower is better)
Translates to: LIRVEGVFNKWDFCVVKLRSQDH*GYVPSI
Trigger: TATGGAGGGTACGTAACCTCAATGGTCCTGGGATCG...CAATTTAACGACACAGAAGTCCCACTTATTGAATACTCCTTCTACTCTGATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TTACAACAAAGAACTTTACAGTTGGATTCACAGCTCCTGCCTTTGGATATGGAACGATCCCAGGACCATTaGGGTTACGTACCCTCCATA +
Preference number: 4 (lower is better)
Translates to: LQQRTLQLDSQLLPLDMERSQDH*GYVPSI
Trigger: TATGGAGGGTACGTAACCTCAATGGTCCTGGGATCG...TTCCATATCCAAAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTTGTTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GACTACATGGGCCTGCATACACATCTAATAGTAGAGGATATTTCTTGGATTTATCGGCTATTCCACACTTaGACACGCCACTTCCCGATC +
Preference number: 4 (lower is better)
Translates to: DYMGLHTHLIVEDISWIYRLFHT*TRHFPI
Trigger: GATCGGGAAGTGGCGTGTTCAAGTGTGGAATAGCCG...ATAAATCCAAGAAATATCCTCTACTATTAGATGTGTATGCAGGCCCATGTAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TGTCTTCCAGGACTCTCAGCCCTTTATCATTCACGCTGCTGTGTAGAGTATAGATTTAACAGGGCAAGCTaGTGTGTTCACATCTCAGTT +
Preference number: 4 (lower is better)
Translates to: CLPGLSALYHSRCCVEYRFNRAS*CVHISV
Trigger: AACTGAGATGTGAACACATCAGCTTGCCCTGTTAAA...TCTATACTCTACACAGCAGCGTGAATGATAAAGGGCTGAGAGTCCTGGAAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGACCAGGACCGGAACATCTCTAAGAGAATAAACTaGCCATCAGGAGATATTGAA +
Preference number: 4 (lower is better)
Translates to: YHSRCCVEYRGADQDRNISKRIN*PSGDIE
Trigger: TTCAATATCTCCTGATGGGCAGTTTATTCTCTTAGA...GATGTTCCGGTCCTGGTCTGCCCCTCTATACTCTACACAGCAGCGTGAATGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp GGAGACCCATGTAACGTTCTGTGTACACTGAGTCATAGTACTCCCACCGGGATAAATTCTTTCTTGTGTTaGCCATGTCACATCACACAA +
Preference number: 4 (lower is better)
Translates to: GDPCNVLCTLSHSTPTGINSFLC*PCHITQ
Trigger: TTGTGTGATGTGACATGGGCAACACAAGAAAGAATT...TATCCCGGTGGGAGTACTATGACTCAGTGTACACAGAACGTTACATGGGTCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp AAAGAACTTTACAGTTGGATTCACAGCTCCTGCCTTTGGATATGGAACCCGTACCTCATTTCAATGTGTTaGCGTGCCACTAAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: KELYSWIHSSCLWIWNPYLISMC*RATKQF
Trigger: GAACTGCTTAGTGGCACGGCAACACATTGAAATGAG...GTACGGGTTCCATATCCAAAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR GCA 90 bp CTGCTAGCTATTCCATGGTCTTCATCAGTATACCACATTGCCTGGAAATCCACTTCTGAAGACAGTGTCTaGTTTTTGACTACATGGGCC +
Preference number: 4 (lower is better)
Translates to: LLAIPWSSSVYHIAWKSTSEDSV*FLTTWA
Trigger: GGCCCATGTAGTCAAAAAGCAGACACTGTCTTCAGA...AGTGGATTTCCAGGCAATGTGGTATACTGATGAAGACCATGGAATAGCTAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp CAGGAGAGCAGTGTCTTGATACTCCCAGCATATGCGATATTGTGCTTCTTAACCAATGTTTTCTGTGCTTaGAAGGTAAGTGGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: QESSVLILPAYAILCFLTNVFCA*KVSGPV
Trigger: AACTGGGCCACTTACCTTGCAAGCACAGAAAACATT...GGTTAAGAAGCACAATATCGCATATGCTGGGAGTATCAAGACACTGCTCTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR GCA 90 bp ATGGAACCCGTACAGTCTTTGGGTACTGCAGTGACTCATCAGAGTAGAAGGAGTCTTCTGTTGATTGCATaGATGATCTTATCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: MEPVQSLGTAVTHQSRRSLLLIA*MILSPW
Trigger: CCAAGGAGATAAGATCATGCATGCAATCAACAGAAG...ACTCCTTCTACTCTGATGAGTCACTGCAGTACCCAAAGACTGTACGGGTTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR GCA 90 bp CTTGCCATCCCTTTAAAGAAGAGAACAACATTTGAACCAGTCCAGTTAGAAAAATTGGGTTCCCAGCCATaGCCTGCTATCTTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: LAIPLKKRTTFEPVQLEKLGSQP*PAIFSP
Trigger: GGGAGAGAAGATAGCAGGGCATGGCTGGGAACCCAA...TTTTTCTAACTGGACTGGTTCAAATGTTGTTCTCTTCTTTAAAGGGATGGCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp CTCATCAGAGTAGAAGGAGTATTCAATAAGTGGGACTTCTGTGTCGTTAAATTGCTGCTCGTGTTGGTATaGTTGGACTTGGGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: LIRVEGVFNKWDFCVVKLLLVLV*LDLGSQ
Trigger: CTGGGAACCCAAGTCCAAGCATACCAACACGAGCAG...CAATTTAACGACACAGAAGTCCCACTTATTGAATACTCCTTCTACTCTGATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGAACTGCTCGTGTTGGTATaGTTGGACTTGGGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: YDQPQIAIRLLSTNPIFELLVLV*LDLGSQ
Trigger: CTGGGAACCCAAGTCCAAGCATACCAACACGAGCAG...TTCAAAAATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TTACAACAAAGAACTTTACAGTTGGATTCACAGCTCCTGCCTTTGGATATGGAAGAGCTGACAGTAGCCTaGTCGTGTTGGTATGCTTGG +
Preference number: 4 (lower is better)
Translates to: LQQRTLQLDSQLLPLDMEELTVA*SCWYAW
Trigger: CCAAGCATACCAACACGAGCAGGCTACTGTCAGCTC...TTCCATATCCAAAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTTGTTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR GCA 90 bp AAAGAACTTTACAGTTGGATTCACAGCTCCTGCCTTTGGATATGGAACCCGTACTTTCTCAGAAAACTGTaGCAGTCTGGCTGTGAACAG +
Preference number: 4 (lower is better)
Translates to: KELYSWIHSSCLWIWNPYFLRKL*QSGCEQ
Trigger: CTGTTCACAGCCAGACTGGCACAGTTTTCTGAGAAA...GTACGGGTTCCATATCCAAAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR GCA 90 bp CTGGTTAGAGCTTCTATCCCGATGACTTCCCAGGTGCCTTTTGTAATAAATGTGTTTCTCAGAAAACTGTaGCAGTCTGGCTGTGAACAG +
Preference number: 4 (lower is better)
Translates to: LVRASIPMTSQVPFVINVFLRKL*QSGCEQ
Trigger: CTGTTCACAGCCAGACTGGCACAGTTTTCTGAGAAA...CACATTTATTACAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTCTAACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp CTGCTAGCTATTCCATGGTCTTCATCAGTATACCACATTGCCTGGAAATCCACTCTTTCCCATCACCCTTaGTGTGTTTTTGTAGCACCT +
Preference number: 4 (lower is better)
Translates to: LLAIPWSSSVYHIAWKSTLSHHP*CVFVAP
Trigger: AGGTGCTACAAAAACACAGCAAGGGTGATGGGAAAG...AGTGGATTTCCAGGCAATGTGGTATACTGATGAAGACCATGGAATAGCTAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp CTGGTTAGAGCTTCTATCCCGATGACTTCCCAGGTGCCTTTTGTAATAAATGTGCTTTCCCATCACCCTTaGTGTGTTTTTGTAGCACCT +
Preference number: 4 (lower is better)
Translates to: LVRASIPMTSQVPFVINVLSHHP*CVFVAP
Trigger: AGGTGCTACAAAAACACAGCAAGGGTGATGGGAAAG...CACATTTATTACAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTCTAACCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp AAAGAACTTTACAGTTGGATTCACAGCTCCTGCCTTTGGATATGGAACCCGTACTTCCCTACTCAACTGTaGACCCTGGCTTCTCAATTA +
Preference number: 4 (lower is better)
Translates to: KELYSWIHSSCLWIWNPYFPTQL*TLASQL
Trigger: TAATTGAGAAGCCAGGGTGCACAGTTGAGTAGGGAA...GTACGGGTTCCATATCCAAAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416189.6
CDS-3UTR GCA 90 bp TATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGAAGCTAGCACTTCCAGCTaGATCAATGTGGCACCAGAG +
Preference number: 4 (lower is better)
Translates to: YDQPQIAIRLLSTNPIFEASTSS*INVAPE
Trigger: CTCTGGTGCCACATTGATGCAGCTGGAAGTGCTAGC...TTCAAAAATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494507.2
CDS-3UTR GCA 90 bp CAATCACATGAACAGGAGAGCAGTGTCTTGATACTCCCAGCATATGCGATATTGTTGAGCATTACTCTGTaGATGGCTGAAGGATACCAC +
Preference number: 4 (lower is better)
Translates to: QSHEQESSVLILPAYAILLSITL*MAEGYH
Trigger: GTGGTATCCTTCAGCCATGCACAGAGTAATGCTCAA...CAATATCGCATATGCTGGGAGTATCAAGACACTGCTCTCCTGTTCATGTGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR CCA 90 bp AGGACCATTGAGGTTACGTACCCTCCATATGACCAGCCCCAAATTGCAATTCGTCCACTGTGTGTTGTTTaGAATCCTCTCTTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: RTIEVTYPPYDQPQIAIRPLCVV*NPLFCN
Trigger: ATTACAGAAGAGAGGATTCCAAACAACACACAGTGG...ACGAATTGCAATTTGGGGCTGGTCATATGGAGGGTACGTAACCTCAATGGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CCA 90 bp GGAGAGCAGTGTCTTGATACTCCCAGCATATGCGATATTGTGCTTCTTAACCCCCCACTGTGTGTTGTTTaGAATCCTCTCTTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: GEQCLDTPSICDIVLLNPPLCVV*NPLFCN
Trigger: ATTACAGAAGAGAGGATTCCAAACAACACACAGTGG...GGGGTTAAGAAGCACAATATCGCATATGCTGGGAGTATCAAGACACTGCTCTCC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR CCA 90 bp TATAGAGGGGCAGACCAGGACCGGAACATCTCAGCTGATAATACTTCGCCTCTTGGAGTATTCAATAAGTaGGACTTCTGTGTCGTTAAA +
Preference number: 4 (lower is better)
Translates to: YRGADQDRNISADNTSPLGVFNK*DFCVVK
Trigger: TTTAACGACACAGAAGTCCCACTTATTGAATACTCC...AAGAGGCGAAGTATTATCAGCTGAGATGTTCCGGTCCTGGTCTGCCCCTCTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CCA 90 bp GGAGACCCATGTAACGTTCTGTGTACACTGAGTCATAGTACTCCCACCGGGATAGGAGTATTCAATAAGTaGGACTTCTGTGTCGTTAAA +
Preference number: 4 (lower is better)
Translates to: GDPCNVLCTLSHSTPTGIGVFNK*DFCVVK
Trigger: TTTAACGACACAGAAGTCCCACTTATTGAATACTCC...TATCCCGGTGGGAGTACTATGACTCAGTGTACACAGAACGTTACATGGGTCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CCA 90 bp TGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACGGAGTATTCAATAAGTaGGACTTCTGTGTCGTTAAA +
Preference number: 4 (lower is better)
Translates to: WGPALLAVSLTFLWSLFNGVFNK*DFCVVK
Trigger: TTTAACGACACAGAAGTCCCACTTATTGAATACTCC...GTTGAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp TTTCATCTTTTAACAGGGCAAGCTGATGTGTTCACATCTCAGTTTCAAGCTGCCTCCTGCCTTTGGATATaGAACCCGTACAGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: FHLLTGQADVFTSQFQAASCLWI*NPYSLW
Trigger: CCAAAGACTGTACGGGTTCCATATCCAAAGGCAGGA...GGCAGCTTGAAACTGAGATGTGAACACATCAGCTTGCCCTGTTAAAAGATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp ATAAATTCTGTAATGGTCAAGGTTGTCTTCTGGAGTTGGGAGACCCATGTAACGTCCTGCCTTTGGATATaGAACCCGTACAGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: INSVMVKVVFWSWETHVTSCLWI*NPYSLW
Trigger: CCAAAGACTGTACGGGTTCCATATCCAAAGGCAGGA...CGTTACATGGGTCTCCCAACTCCAGAAGACAACCTTGACCATTACAGAATTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416189.6
CDS-3UTR CCA 90 bp GGAGAGCAGTGTCTTGATACTCCCAGCATATGCGATATTGTGCTTCTTAACCCCAAAGAACTTTACAGTTaGATTCACAGCTCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: GEQCLDTPSICDIVLLNPKELYS*IHSSCL
Trigger: AAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTT...GGGGTTAAGAAGCACAATATCGCATATGCTGGGAGTATCAAGACACTGCTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR CCA 90 bp AGGGAATCTATGCAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAGTGGTATGCTTGGACTTaGGTTCCCAGCCATGCCCTG +
Preference number: 4 (lower is better)
Translates to: RESMQSLHKNNSYLLFQQWYAWT*VPSHAL
Trigger: CAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCA...CTGCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTGCATAGATTCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp TTGAAAATTGTCTGGCTGCTTCAATTTGATCTTCAACTTCAAATGTTCCCAGTCACCTATAGCCATAACTaGCACCTGGGGGCCTGCGTT +
Preference number: 4 (lower is better)
Translates to: LKIVWLLQFDLQLQMFPVTYSHN*HLGACV
Trigger: AACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGT...GACTGGGAACATTTGAAGTTGAAGATCAAATTGAAGCAGCCAGACAATTTTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CTGCTAGCTATTCCATGGTCTTCATCAGTATACCACATTGCCTGGAAATCCACTGTTCTCCAAGAAAACTaGGCTGTTTCCATATTCAGC +
Preference number: 4 (lower is better)
Translates to: LLAIPWSSSVYHIAWKSTVLQEN*AVSIFS
Trigger: GCTGAATATGGAAACAGCTCAGTTTTCTTGGAGAAC...AGTGGATTTCCAGGCAATGTGGTATACTGATGAAGACCATGGAATAGCTAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TTGAAAATTGTCTGGCTGCTTCAATTTGATCTTCAACTTCAAATGTTCCCAGTCCCACTGGTGACCATGTaGCCCACTGTGTGTTGTTTG +
Preference number: 4 (lower is better)
Translates to: LKIVWLLQFDLQLQMFPVPLVTM*PTVCCL
Trigger: CAAACAACACACAGTGGGTCACATGGTCACCAGTGG...GACTGGGAACATTTGAAGTTGAAGATCAAATTGAAGCAGCCAGACAATTTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp AGGGAATCTATGCAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAGCCACTGGTGACCATGTaGCCCACTGTGTGTTGTTTG +
Preference number: 4 (lower is better)
Translates to: RESMQSLHKNNSYLLFQQPLVTM*PTVCCL
Trigger: CAAACAACACACAGTGGGTCACATGGTCACCAGTGG...CTGCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTGCATAGATTCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TCAGGGAATCTATGCAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCCCACTGGTGACCATGTaGCCCACTGTGTGTTGTTTG +
Preference number: 4 (lower is better)
Translates to: SGNLCKASIKTIPICCFSPLVTM*PTVCCL
Trigger: CAAACAACACACAGTGGGTCACATGGTCACCAGTGG...GCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTGCATAGATTCCCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TTTACAACAAAGAACTTTACAGTTGGATTCACAGCTCCTGCCTTTGGATATGGATTTATGACCCACTGGTaGCCATGTGACCCACTGTGT +
Preference number: 4 (lower is better)
Translates to: FTTKNFTVGFTAPAFGYGFMTHW*PCDPLC
Trigger: ACACAGTGGGTCACATGGTCACCAGTGGGTCATAAA...TCCATATCCAAAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTTGTTGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CAATCACATGAACAGGAGAGCAGTGTCTTGATACTCCCAGCATATGCGATATTGGGTAAAATGAGGTTCTaGAGGCCTAAATCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: QSHEQESSVLILPAYAILGKMRF*RPKSSN
Trigger: GTTGGAAGATTTAGGCCTTCAGAACCTCATTTTACC...CAATATCGCATATGCTGGGAGTATCAAGACACTGCTCTCCTGTTCATGTGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR TCA 90 bp GTGGGTATATATATGTTGGTGTGCTGTGCTGCTAGCTATTCCATGGTCTTCATCGGTAAAATGAGGTTCTaGAGGCCTAAATCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: VGIYMLVCCAASYSMVFIGKMRF*RPKSSN
Trigger: GTTGGAAGATTTAGGCCTTCAGAACCTCATTTTACC...GATGAAGACCATGGAATAGCTAGCAGCACAGCACACCAACATATATATACCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TTTGGAATGATCAAAGTGCCAGAAGGGTCCCTAGTACTTATGCTAGCACTTCCACCATCAAGGGTAAAATaGGGTTCTGAAGGCCTAAAT +
Preference number: 4 (lower is better)
Translates to: FGMIKVPEGSLVLMLALPPSRVK*GSEGLN
Trigger: ATTTAGGCCTTCAGAACCTCATTTTACCCTTGATGG...TGGAAGTGCTAGCATAAGTACTAGGGACCCTTCTGGCACTTTGATCATTCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494507.2
CDS-3UTR TCA 90 bp TATTTTCATCTTTTAACAGGGCAAGCTGATGTGTTCACATCTCAGTTTCAAGCTGAGCTTCTATCCCGATaGCTTCCCAGGTGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: YFHLLTGQADVFTSQFQAELLSR*LPRCLL
Trigger: CAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTC...AGCTTGAAACTGAGATGTGAACACATCAGCTTGCCCTGTTAAAAGATGAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GTTAGAGCTTCTATCCCGATGACTTCCCAGGTGCCTTTTGTAATAAATGTGCAGGATTCAGCTCACAACTaGGGCATGTCACTTTTGTAT +
Preference number: 4 (lower is better)
Translates to: VRASIPMTSQVPFVINVQDSAHN*GMSLLY
Trigger: ATACAAAAGTGACATGCCTCAGTTGTGAGCTGAATC...CTGCACATTTATTACAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTCTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp ATTTACAATGCTTTCCCATCACCCTTGCTGTGTTTTTGTAGCACCTATAGCCATACAGTGTCTGCTTTTTaGCTACATGGGCCTGCATAC +
Preference number: 4 (lower is better)
Translates to: IYNAFPSPLLCFCSTYSHTVSAF*LHGPAY
Trigger: GTATGCAGGCCCATGTAGTCAAAAAGCAGACACTGT...ATGGCTATAGGTGCTACAAAAACACAGCAAGGGTGATGGGAAAGCATTGTAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp ATGGAACCCGTACAGTCTTTGGGTACTGCAGTGACTCATCAGAGTAGAAGGAGTAGAAACATTGTTTTATaGAGTGGCTCATGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: MEPVQSLGTAVTHQSRRSRNIVL*SGSCGY
Trigger: ATACCCACATGAGCCACTTCATAAAACAATGTTTCT...ACTCCTTCTACTCTGATGAGTCACTGCAGTACCCAAAGACTGTACGGGTTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACTCTAAGAGAATAAACTaGCCATCAGGAGATATTGAA +
Preference number: 4 (lower is better)
Translates to: WGPALLAVSLTFLWSLFNSKRIN*PSGDIE
Trigger: TTCAATATCTCCTGATGGGCAGTTTATTCTCTTAGA...GTTGAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp GGAGAGCAGTGTCTTGATACTCCCAGCATATGCGATATTGTGCTTCTTAACCCCATTGTTCCAAACATATaGCAATTTATGACCCACTGG +
Preference number: 4 (lower is better)
Translates to: GEQCLDTPSICDIVLLNPIVPNI*QFMTHW
Trigger: CCAGTGGGTCATAAATTGGCATATGTTTGGAACAAT...GGGGTTAAGAAGCACAATATCGCATATGCTGGGAGTATCAAGACACTGCTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR GCA 90 bp GGCGCTTACACAGCATGCATGGGAAGGAATGATTATCCCATTAAGCCCACTTGTAATTCTTTCTTGTGTTaGCCATGTCACATCACACAA +
Preference number: 4 (lower is better)
Translates to: GAYTACMGRNDYPIKPTCNSFLC*PCHITQ
Trigger: TTGTGTGATGTGACATGGGCAACACAAGAAAGAATT...ACAAGTGGGCTTAATGGGATAATCATTCCTTCCCATGCATGCTGTGTAAGCGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR GCA 90 bp CAATCACATGAACAGGAGAGCAGTGTCTTGATACTCCCAGCATATGCGATATTGCTTTATCATTCACGCTaGTGTGTAGAGTATAGAGGG +
Preference number: 4 (lower is better)
Translates to: QSHEQESSVLILPAYAILLYHSR*CVEYRG
Trigger: CCCTCTATACTCTACACAGCAGCGTGAATGATAAAG...CAATATCGCATATGCTGGGAGTATCAAGACACTGCTCTCCTGTTCATGTGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR GCA 90 bp CAGTGTCTGCTTTTTGACTACATGGGCCTGCATACACATCTAATAGTAGAGGATTCTGAAGACAGTGTCTaGTTTTTGACTACATGGGCC +
Preference number: 4 (lower is better)
Translates to: QCLLFDYMGLHTHLIVEDSEDSV*FLTTWA
Trigger: GGCCCATGTAGTCAAAAAGCAGACACTGTCTTCAGA...ATCCTCTACTATTAGATGTGTATGCAGGCCCATGTAGTCAAAAAGCAGACACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp GTTAGAGCTTCTATCCCGATGACTTCCCAGGTGCCTTTTGTAATAAATGTGCAGAATGTTTTCTGTGCTTaGAAGGTAAGTGGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: VRASIPMTSQVPFVINVQNVFCA*KVSGPV
Trigger: AACTGGGCCACTTACCTTGCAAGCACAGAAAACATT...CTGCACATTTATTACAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTCTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TTTCATCTTTTAACAGGGCAAGCTGATGTGTTCACATCTCAGTTTCAAGCTGCCTCACTGCCCACATCTTaGCATCCCTTTAAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: FHLLTGQADVFTSQFQAASLPTS*HPFKEE
Trigger: CTCTTCTTTAAAGGGATGGCAAGATGTGGGCAGTGA...GGCAGCTTGAAACTGAGATGTGAACACATCAGCTTGCCCTGTTAAAAGATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp AGGGAATCTATGCAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAGCTCTTATCCTGTCCCTaGCCTAGTGACATCACTGCC +
Preference number: 4 (lower is better)
Translates to: RESMQSLHKNNSYLLFQQLLSCP*PSDITA
Trigger: GGCAGTGATGTCACTAGGGCAGGGACAGGATAAGAG...CTGCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTGCATAGATTCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp AATATCCATGACCGAATAGTTCTGAATCCTCCTGAGCCACTGCAAAGAAATTCTCTGCTCGTTGGATCATaGTGGTTCCTCAGTTACCTT +
Preference number: 4 (lower is better)
Translates to: NIHDRIVLNPPEPLQRNSLLVGS*WFLSYL
Trigger: AAGGTAACTGAGGAACCAGCATGATCCAACGAGCAG...AGAATTTCTTTGCAGTGGCTCAGGAGGATTCAGAACTATTCGGTCATGGATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416189.6
CDS-3UTR CCA 90 bp GGAGAGCAGTGTCTTGATACTCCCAGCATATGCGATATTGTGCTTCTTAACCCCGGAGTATTCAATAAGTaGGACTTCTGTGTCGTTAAA +
Preference number: 4 (lower is better)
Translates to: GEQCLDTPSICDIVLLNPGVFNK*DFCVVK
Trigger: TTTAACGACACAGAAGTCCCACTTATTGAATACTCC...GGGGTTAAGAAGCACAATATCGCATATGCTGGGAGTATCAAGACACTGCTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR CCA 90 bp TTGGTGACTGAGCTGAGAGAGTCTGTATTTACAACAAAGAACTTTACAGTTGGACACAGCTCCTGCCTTTaGATATGGAACCCGTACAGT +
Preference number: 4 (lower is better)
Translates to: LVTELRESVFTTKNFTVGHSSCL*IWNPYS
Trigger: ACTGTACGGGTTCCATATCCAAAGGCAGGAGCTGTG...TCCAACTGTAAAGTTCTTTGTTGTAAATACAGACTCTCTCAGCTCAGTCACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR CCA 90 bp GTGCATTGGGCACCATTTGAACTGAGCACAGAGCAAATCATGTGTGTTAGAGGATTTTTGGAGGGCATCTaGACATTCTGCAGCATTTTA +
Preference number: 4 (lower is better)
Translates to: VHWAPFELSTEQIMCVRGFLEGI*TFCSIL
Trigger: TAAAATGCTGCAGAATGTCCAGATGCCCTCCAAAAA...TCCTCTAACACACATGATTTGCTCTGTGCTCAGTTCAAATGGTGCCCAATGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR CCA 90 bp TTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACTGCTGTGGTTTTGTTGTCTTCTGGAGTTaGGAGACCCATGTAACGTTC +
Preference number: 4 (lower is better)
Translates to: LLAVSLTFLWSLFNCCGFVVFWS*ETHVTF
Trigger: GAACGTTACATGGGTCTCCCAACTCCAGAAGACAAC...AAAACCACAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp CATACCAGACAGAAATGGATTTTCATATTTGAGCTGAGCTATTATCATGCTGGTCATCGACCAGGGCTTTaGAGATCTGAGCTGACTGCT +
Preference number: 4 (lower is better)
Translates to: HTRQKWIFIFELSYYHAGHRPGL*RSELTA
Trigger: AGCAGTCAGCTCAGATCTCCAAAGCCCTGGTCGATG...ACCAGCATGATAATAGCTCAGCTCAAATATGAAAATCCATTTCTGTCTGGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR CCA 90 bp TTGAAAATTGTCTGGCTGCTTCAATTTGATCTTCAACTTCAAATGTTCCCAGTCCATCGACCAGGGCTTTaGAGATCTGAGCTGACTGCT +
Preference number: 4 (lower is better)
Translates to: LKIVWLLQFDLQLQMFPVHRPGL*RSELTA
Trigger: AGCAGTCAGCTCAGATCTCCAAAGCCCTGGTCGATG...GACTGGGAACATTTGAAGTTGAAGATCAAATTGAAGCAGCCAGACAATTTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CCA 90 bp TCACTGGTTAGAGCTTCTATCCCGATGACTTCCCAGGTGCCTTTTGTAATAAATGTATACCACATTGCCTaGAAATCCACTCCAACATCG +
Preference number: 4 (lower is better)
Translates to: SLVRASIPMTSQVPFVINVYHIA*KSTPTS
Trigger: CGATGTTGGAGTGGATTTCCAGGCAATGTGGTATAC...ATTTATTACAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTCTAACCAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CCA 90 bp CTGGTTAGAGCTTCTATCCCGATGACTTCCCAGGTGCCTTTTGTAATAAATGTGCTGCTAGCTATTCCATaGTCTTCATCAGTATACCAC +
Preference number: 4 (lower is better)
Translates to: LVRASIPMTSQVPFVINVLLAIP*SSSVYH
Trigger: GTGGTATACTGATGAAGACCATGGAATAGCTAGCAG...CACATTTATTACAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTCTAACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CCA 90 bp TTTACAACAAAGAACTTTACAGTTGGATTCACAGCTCCTGCCTTTGGATATGGATCTGTAGCTGCTCGTTaGATCATGCTGGTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: FTTKNFTVGFTAPAFGYGSVAAR*IMLVPQ
Trigger: CTGAGGAACCAGCATGATCCAACGAGCAGCTACAGA...TCCATATCCAAAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTTGTTGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416189.6
CDS-3UTR CCA 90 bp TATTTTCATCTTTTAACAGGGCAAGCTGATGTGTTCACATCTCAGTTTCAAGCTGGTTTCGCCAGCTTTTaGGCCATTTGGGGAGTTTGG +
Preference number: 4 (lower is better)
Translates to: YFHLLTGQADVFTSQFQAGFASF*AIWGVW
Trigger: CCAAACTCCCCAAATGGCCCAAAAGCTGGCGAAACC...AGCTTGAAACTGAGATGTGAACACATCAGCTTGCCCTGTTAAAAGATGAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000676479.1
CDS-3UTR CCA 90 bp TATTTTCATCTTTTAACAGGGCAAGCTGATGTGTTCACATCTCAGTTTCAAGCTTGCTTCCCACTGTCATaGCCAACAGTTCAGGCATGC +
Preference number: 4 (lower is better)
Translates to: YFHLLTGQADVFTSQFQACFPLS*PTVQAC
Trigger: GCATGCCTGAACTGTTGGCCATGACAGTGGGAAGCA...AGCTTGAAACTGAGATGTGAACACATCAGCTTGCCCTGTTAAAAGATGAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678668.1
3UTR CAA 72 bp TTGAATTTCTGTAATGGTCAAGGTTGTCTTCTGGAGTaGGGAGACCCATGTAACGTTCTGTGTACACTGAGT +
Preference number: 4 (lower is better)
Translates to: LNFCNGQGCLLE*GDPCNVLCTLS
Trigger: ACTCAGTGTACACAGAACGTTACATGGGTCTCCCAACTCCAGAAGACAACCTTGACCATTACAGAAATTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR CAA 72 bp GAGACTGAACAATCACATGAACAGGAGAGCAGTGTCTaGATACTCCCAGCATATGCGATATTGTGCTTCTTA +
Preference number: 4 (lower is better)
Translates to: ETEQSHEQESSV*ILPAYAILCFL
Trigger: TAAGAAGCACAATATCGCATATGCTGGGAGTATCAAGACACTGCTCTCCTGTTCATGTGATTGTTCAGTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR TCA 90 bp TACATGGGCCTGCATACACATCTAATAGTAGAGGATATTTCTTGGATTTATCAACCACTGGTGACCATGTaGCCCACTGTGTGTTGTTTG +
Preference number: 4 (lower is better)
Translates to: YMGLHTHLIVEDISWIYQPLVTM*PTVCCL
Trigger: CAAACAACACACAGTGGGTCACATGGTCACCAGTGG...TTGATAAATCCAAGAAATATCCTCTACTATTAGATGTGTATGCAGGCCCATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TATTTTCATCTTTTAACAGGGCAAGCTGATGTGTTCACATCTCAGTTTCAAGCTTTTATGACCCACTGGTaGCCATGTGACCCACTGTGT +
Preference number: 4 (lower is better)
Translates to: YFHLLTGQADVFTSQFQAFMTHW*PCDPLC
Trigger: ACACAGTGGGTCACATGGTCACCAGTGGGTCATAAA...AGCTTGAAACTGAGATGTGAACACATCAGCTTGCCCTGTTAAAAGATGAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GACATAATACGTAGAAATATCCTCTGCATAGACAACAACAGCTCTAGCCATTCCACATATGCCAATTTATaGCCCACTGGTGACCATGTG +
Preference number: 4 (lower is better)
Translates to: DIIRRNILCIDNNSSSHSTYANL*PTGDHV
Trigger: CACATGGTCACCAGTGGGTCATAAATTGGCATATGT...GGAATGGCTAGAGCTGTTGTTGTCTATGCAGAGGATATTTCTACGTATTATGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR TCA 90 bp TTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACTGCTGTGGTTTTACATATGCCAATTTATaGCCCACTGGTGACCATGTG +
Preference number: 4 (lower is better)
Translates to: LLAVSLTFLWSLFNCCGFTYANL*PTGDHV
Trigger: CACATGGTCACCAGTGGGTCATAAATTGGCATATGT...AAAACCACAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CAGTGTCTGCTTTTTGACTACATGGGCCTGCATACACATCTAATAGTAGAGGATCTTTCCCCGTCCATGTaGTTCTGTAACTTGGTAAAT +
Preference number: 4 (lower is better)
Translates to: QCLLFDYMGLHTHLIVEDLSPSM*FCNLVN
Trigger: ATTTACCAAGTTACAGAATCACATGGACGGGGAAAG...ATCCTCTACTATTAGATGTGTATGCAGGCCCATGTAGTCAAAAAGCAGACACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACTGCTGTGGTTTTGAGCAGAGTAGGCACTaGAGACTTCCTCTTCATAAA +
Preference number: 4 (lower is better)
Translates to: LLAVSLTFLWSLFNCCGFEQSRH*RLPLHK
Trigger: TTTATGAAGAGGAAGTCTTCAGTGCCTACTCTGCTC...AAAACCACAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CATATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGAGTTCTGAATCCTCCTaGGCCACTGCAAAGAAATTC +
Preference number: 4 (lower is better)
Translates to: HMTSPKLQFVCCPQIPFLSSESS*ATAKKF
Trigger: GAATTTCTTTGCAGTGGCTCAGGAGGATTCAGAACT...CAAAAATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CCTCCATATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTAGTCACAAATATCCATaGCCGAATAGTTCTGAATCC +
Preference number: 4 (lower is better)
Translates to: PPYDQPQIAIRLLSTNPISHKYP*PNSSES
Trigger: GGATTCAGAACTATTCGGTCATGGATATTTGTGACT...AATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATATGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TTTCATCTTTTAACAGGGCAAGCTGATGTGTTCACATCTCAGTTTCAAGCTGCCGGTAAAATGAGGTTCTaGAGGCCTAAATCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: FHLLTGQADVFTSQFQAAGKMRF*RPKSSN
Trigger: GTTGGAAGATTTAGGCCTTCAGAACCTCATTTTACC...GGCAGCTTGAAACTGAGATGTGAACACATCAGCTTGCCCTGTTAAAAGATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TTTCATCTTTTAACAGGGCAAGCTGATGTGTTCACATCTCAGTTTCAAGCTGCCGATTCAGCTCACAACTaGGGCATGTCACTTTTGTAT +
Preference number: 4 (lower is better)
Translates to: FHLLTGQADVFTSQFQAADSAHN*GMSLLY
Trigger: ATACAAAAGTGACATGCCTCAGTTGTGAGCTGAATC...GGCAGCTTGAAACTGAGATGTGAACACATCAGCTTGCCCTGTTAAAAGATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GTTAGAGCTTCTATCCCGATGACTTCCCAGGTGCCTTTTGTAATAAATGTGCAGACTTCGCCTCTTTACTaGATGACACAGAATAGTACT +
Preference number: 4 (lower is better)
Translates to: VRASIPMTSQVPFVINVQTSPLY*MTQNST
Trigger: AGTACTATTCTGTGTCATTCAGTAAAGAGGCGAAGT...CTGCACATTTATTACAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GTGGGTATATATATGTTGGTGTGCTGTGCTGCTAGCTATTCCATGGTCTTCATCCACAAATCCCATTTTTaGAAATTGTCTGGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: VGIYMLVCCAASYSMVFIHKSHF*KLSGCF
Trigger: GAAGCAGCCAGACAATTTTCAAAAATGGGATTTGTG...GATGAAGACCATGGAATAGCTAGCAGCACAGCACACCAACATATATATACCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CCTCCATATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTCACAAATCCCATTTTTaGAAATTGTCTGGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: PPYDQPQIAIRLLSTNPIHKSHF*KLSGCF
Trigger: GAAGCAGCCAGACAATTTTCAAAAATGGGATTTGTG...AATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATATGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TGTGACCCACTGTGTGTTGTTTGGAATCCTCTCTTCTGTAATCAGCTGCCTTTTCACAAATCCCATTTTTaGAAATTGTCTGGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: CDPLCVVWNPLFCNQLPFHKSHF*KLSGCF
Trigger: GAAGCAGCCAGACAATTTTCAAAAATGGGATTTGTG...AAAAGGCAGCTGATTACAGAAGAGAGGATTCCAAACAACACACAGTGGGTCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676479.1
ENST00000676624.1
CDS-3UTR TCA 90 bp CAAAGGAGACTAAAAAGTAGCCAAGGCAGGGAGCATTTCAAGAAGGAGAGAAAGAATGGCATGGTATTTTaGGGTGCTAAGGTAAAGAGA +
Preference number: 4 (lower is better)
Translates to: QRRLKSSQGREHFKKERKNGMVF*GAKVKR
Trigger: TCTCTTTACCTTAGCACCTCAAAATACCATGCCATT...CTTTCTCTCCTTCTTGAAATGCTCCCTGCCTTGGCTACTTTTTAGTCTCCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676479.1
CDS-3UTR GCA 90 bp TTTCATCTTTTAACAGGGCAAGCTGATGTGTTCACATCTCAGTTTCAAGCTGCCCTTTATCATTCACGCTaGTGTGTAGAGTATAGAGGG +
Preference number: 4 (lower is better)
Translates to: FHLLTGQADVFTSQFQAALYHSR*CVEYRG
Trigger: CCCTCTATACTCTACACAGCAGCGTGAATGATAAAG...GGCAGCTTGAAACTGAGATGTGAACACATCAGCTTGCCCTGTTAAAAGATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp GACATAATACGTAGAAATATCCTCTGCATAGACAACAACAGCTCTAGCCATTCCTCTGAAGACAGTGTCTaGTTTTTGACTACATGGGCC +
Preference number: 4 (lower is better)
Translates to: DIIRRNILCIDNNSSSHSSEDSV*FLTTWA
Trigger: GGCCCATGTAGTCAAAAAGCAGACACTGTCTTCAGA...GGAATGGCTAGAGCTGTTGTTGTCTATGCAGAGGATATTTCTACGTATTATGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR GCA 90 bp CAATCACATGAACAGGAGAGCAGTGTCTTGATACTCCCAGCATATGCGATATTGCTTCTGTTGATTGCATaGATGATCTTATCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: QSHEQESSVLILPAYAILLLLIA*MILSPW
Trigger: CCAAGGAGATAAGATCATGCATGCAATCAACAGAAG...CAATATCGCATATGCTGGGAGTATCAAGACACTGCTCTCCTGTTCATGTGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR GCA 90 bp CCTCCATATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTGTGAACGTTATCATCTaGTGTTCCATGAATAAGGAG +
Preference number: 4 (lower is better)
Translates to: PPYDQPQIAIRLLSTNPIVNVII*CSMNKE
Trigger: CTCCTTATTCATGGAACAGCAGATGATAACGTTCAC...AATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATATGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp CATATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGTCACTGCCCACATCTTaGCATCCCTTTAAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: HMTSPKLQFVCCPQIPFLSLPTS*HPFKEE
Trigger: CTCTTCTTTAAAGGGATGGCAAGATGTGGGCAGTGA...CAAAAATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp AGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACTGCTGTGGTTTTACTTAGAAGAGCTGACAGTAGCCTaGTCGTGTTGGTATGCTTGG +
Preference number: 4 (lower is better)
Translates to: SFPYISLESFQLLWFYLEELTVA*SCWYAW
Trigger: CCAAGCATACCAACACGAGCAGGCTACTGTCAGCTC...TTCTAAGTAAAACCACAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp ATTTACAATGCTTTCCCATCACCCTTGCTGTGTTTTTGTAGCACCTATAGCCATTTTCTCAGAAAACTGTaGCAGTCTGGCTGTGAACAG +
Preference number: 4 (lower is better)
Translates to: IYNAFPSPLLCFCSTYSHFLRKL*QSGCEQ
Trigger: CTGTTCACAGCCAGACTGGCACAGTTTTCTGAGAAA...ATGGCTATAGGTGCTACAAAAACACAGCAAGGGTGATGGGAAAGCATTGTAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp AACTTCAAATGTTCCCAGTCTTCTGTTGATTGCATGCATGATCTTATCTCCTTGATAAATGGGCAAGGATaGAATGGTGGTGCAGTTGGC +
Preference number: 4 (lower is better)
Translates to: NFKCSQSSVDCMHDLISLINGQG*NGGAVG
Trigger: GCCAACTGCACCACCATTGCATCCTTGCCCATTTAT...CAAGGAGATAAGATCATGCATGCAATCAACAGAAGACTGGGAACATTTGAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416189.6
CDS-3UTR GCA 90 bp CAATCACATGAACAGGAGAGCAGTGTCTTGATACTCCCAGCATATGCGATATTGGTTTTTCTATACCATTaGCTGGAAATCCACTCCAAC +
Preference number: 4 (lower is better)
Translates to: QSHEQESSVLILPAYAILVFLYH*LEIHSN
Trigger: GTTGGAGTGGATTTCCAGGCAATGGTATAGAAAAAC...CAATATCGCATATGCTGGGAGTATCAAGACACTGCTCTCCTGTTCATGTGATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR CCA 90 bp GTGGGTATATATATGTTGGTGTGCTGTGCTGCTAGCTATTCCATGGTCTTCATCCCACTGTGTGTTGTTTaGAATCCTCTCTTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: VGIYMLVCCAASYSMVFIPLCVV*NPLFCN
Trigger: ATTACAGAAGAGAGGATTCCAAACAACACACAGTGG...GATGAAGACCATGGAATAGCTAGCAGCACAGCACACCAACATATATATACCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CCA 90 bp CTGCTAGCTATTCCATGGTCTTCATCAGTATACCACATTGCCTGGAAATCCACTCCACTGTGTGTTGTTTaGAATCCTCTCTTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: LLAIPWSSSVYHIAWKSTPLCVV*NPLFCN
Trigger: ATTACAGAAGAGAGGATTCCAAACAACACACAGTGG...AGTGGATTTCCAGGCAATGTGGTATACTGATGAAGACCATGGAATAGCTAGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CCA 90 bp GTTAGAGCTTCTATCCCGATGACTTCCCAGGTGCCTTTTGTAATAAATGTGCAGCCACTGTGTGTTGTTTaGAATCCTCTCTTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: VRASIPMTSQVPFVINVQPLCVV*NPLFCN
Trigger: ATTACAGAAGAGAGGATTCCAAACAACACACAGTGG...CTGCACATTTATTACAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CCA 90 bp GACTACATGGGCCTGCATACACATCTAATAGTAGAGGATATTTCTTGGATTTATCACAGCTCCTGCCTTTaGATATGGAACCCGTACAGT +
Preference number: 4 (lower is better)
Translates to: DYMGLHTHLIVEDISWIYHSSCL*IWNPYS
Trigger: ACTGTACGGGTTCCATATCCAAAGGCAGGAGCTGTG...ATAAATCCAAGAAATATCCTCTACTATTAGATGTGTATGCAGGCCCATGTAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CCA 90 bp TCTAATAGCTTGTTCGTTCAAGCCAGAAAGTCAGGTTTGAATATAGATTCGTACCACAGCTCCTGCCTTTaGATATGGAACCCGTACAGT +
Preference number: 4 (lower is better)
Translates to: SNSLFVQARKSGLNIDSYHSSCL*IWNPYS
Trigger: ACTGTACGGGTTCCATATCCAAAGGCAGGAGCTGTG...GTACGAATCTATATTCAAACCTGACTTTCTGGCTTGAACGAACAAGCTATTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434918.6
ENST00000678566.1
CDS-3UTR CCA 90 bp GTGCATTGGGCACCATTTGAACTGAGCACAGAGCAAATCATGTGTGTTAGAGGAAGTTCCATCTTCCACTaGATTCATCATAGTCACAAA +
Preference number: 4 (lower is better)
Translates to: VHWAPFELSTEQIMCVRGSSIFH*IHHSHK
Trigger: TTTGTGACTATGATGAATCCAGTGGAAGATGGAACT...TCCTCTAACACACATGATTTGCTCTGTGCTCAGTTCAAATGGTGCCCAATGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR CCA 90 bp GTGGGTATATATATGTTGGTGTGCTGTGCTGCTAGCTATTCCATGGTCTTCATCTTTTTGGAGGGCATCTaGACATTCTGCAGCATTTTA +
Preference number: 4 (lower is better)
Translates to: VGIYMLVCCAASYSMVFIFLEGI*TFCSIL
Trigger: TAAAATGCTGCAGAATGTCCAGATGCCCTCCAAAAA...GATGAAGACCATGGAATAGCTAGCAGCACAGCACACCAACATATATATACCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CCA 90 bp AGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACTGCTGTGGTTTTACTTAGAACATCGACCAGGGCTTTaGAGATCTGAGCTGACTGCT +
Preference number: 4 (lower is better)
Translates to: SFPYISLESFQLLWFYLEHRPGL*RSELTA
Trigger: AGCAGTCAGCTCAGATCTCCAAAGCCCTGGTCGATG...TTCTAAGTAAAACCACAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp CATAAATGTCATATGAAGCTGTGTAGGAATGCCTCCATTGCTTCACGTAGTTGTGTATACCACATTGCCTaGAAATCCACTCCAACATCG +
Preference number: 4 (lower is better)
Translates to: HKCHMKLCRNASIASRSCVYHIA*KSTPTS
Trigger: CGATGTTGGAGTGGATTTCCAGGCAATGTGGTATAC...ACAACTACGTGAAGCAATGGAGGCATTCCTACACAGCTTCATATGACATTTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676479.1
ENST00000676624.1
CDS-3UTR CCA 90 bp TGTCTTCCAGGACTCTCAGCCCTTTATCATTCACGCTGCTGTGTAGAGTATAGAATGAAGTGGCTCATGTaGGTATATATATGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: CLPGLSALYHSRCCVEYRMKWLM*VYICWC
Trigger: ACACCAACATATATATACCCACATGAGCCACTTCAT...TCTATACTCTACACAGCAGCGTGAATGATAAAGGGCTGAGAGTCCTGGAAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CCA 90 bp TCTAATAGCTTGTTCGTTCAAGCCAGAAAGTCAGGTTTGAATATAGATTCGTACGTAGCCTGCTCGTGTTaGTATGCTTGGACTTGGGTT +
Preference number: 4 (lower is better)
Translates to: SNSLFVQARKSGLNIDSYVACSC*YAWTWV
Trigger: AACCCAAGTCCAAGCATACCAACACGAGCAGGCTAC...GTACGAATCTATATTCAAACCTGACTTTCTGGCTTGAACGAACAAGCTATTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678566.1
CDS-3UTR CCA 90 bp AGGGAATCTATGCAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAGGTAGCCTGCTCGTGTTaGTATGCTTGGACTTGGGTT +
Preference number: 4 (lower is better)
Translates to: RESMQSLHKNNSYLLFQQVACSC*YAWTWV
Trigger: AACCCAAGTCCAAGCATACCAACACGAGCAGGCTAC...CTGCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTGCATAGATTCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
3UTR CAA 72 bp AATAAATTCTGTAATGGTCAAGGTTGTCTTCTGGAGTaGGGAGACCCATGTAACGTTCTGTGTACACTGAGT +
Preference number: 4 (lower is better)
Translates to: NKFCNGQGCLLE*GDPCNVLCTLS
Trigger: ACTCAGTGTACACAGAACGTTACATGGGTCTCCCAACTCCAGAAGACAACCTTGACCATTACAGAATTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416189.6
CDS-3UTR TCA 90 bp TTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACTGCTGTGGTTTTGTTCTCCAAGAAAACTaGGCTGTTTCCATATTCAGC +
Preference number: 4 (lower is better)
Translates to: LLAVSLTFLWSLFNCCGFVLQEN*AVSIFS
Trigger: GCTGAATATGGAAACAGCTCAGTTTTCTTGGAGAAC...AAAACCACAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CTGGTTAGAGCTTCTATCCCGATGACTTCCCAGGTGCCTTTTGTAATAAATGTGATCATAAATGTCATATaGAGCTGTGTAGGAATGCCT +
Preference number: 4 (lower is better)
Translates to: LVRASIPMTSQVPFVINVIINVI*SCVGMP
Trigger: AGGCATTCCTACACAGCTTCATATGACATTTATGAT...CACATTTATTACAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTCTAACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
CDS-3UTR TCA 90 bp ATTTACAATGCTTTCCCATCACCCTTGCTGTGTTTTTGTAGCACCTATAGCCATCTTTCCCCGTCCATGTaGTTCTGTAACTTGGTAAAT +
Preference number: 4 (lower is better)
Translates to: IYNAFPSPLLCFCSTYSHLSPSM*FCNLVN
Trigger: ATTTACCAAGTTACAGAATCACATGGACGGGGAAAG...ATGGCTATAGGTGCTACAAAAACACAGCAAGGGTGATGGGAAAGCATTGTAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp AATATCCATGACCGAATAGTTCTGAATCCTCCTGAGCCACTGCAAAGAAATTCTCTTTCCCCGTCCATGTaGTTCTGTAACTTGGTAAAT +
Preference number: 4 (lower is better)
Translates to: NIHDRIVLNPPEPLQRNSLSPSM*FCNLVN
Trigger: ATTTACCAAGTTACAGAATCACATGGACGGGGAAAG...AGAATTTCTTTGCAGTGGCTCAGGAGGATTCAGAACTATTCGGTCATGGATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CATACCAGACAGAAATGGATTTTCATATTTGAGCTGAGCTATTATCATGCTGGTCTTTGGGTACTGCAGTaGCTCATCAGAGTAGAAGGA +
Preference number: 4 (lower is better)
Translates to: HTRQKWIFIFELSYYHAGLWVLQ*LIRVEG
Trigger: TCCTTCTACTCTGATGAGTCACTGCAGTACCCAAAG...ACCAGCATGATAATAGCTCAGCTCAAATATGAAAATCCATTTCTGTCTGGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR TCA 90 bp TCTAATAGCTTGTTCGTTCAAGCCAGAAAGTCAGGTTTGAATATAGATTCGTACCTTTGGGTACTGCAGTaGCTCATCAGAGTAGAAGGA +
Preference number: 4 (lower is better)
Translates to: SNSLFVQARKSGLNIDSYLWVLQ*LIRVEG
Trigger: TCCTTCTACTCTGATGAGTCACTGCAGTACCCAAAG...GTACGAATCTATATTCAAACCTGACTTTCTGGCTTGAACGAACAAGCTATTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434918.6
ENST00000678566.1
CDS-3UTR TCA 90 bp TTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACTGCTGTGGTTTTGATTCAGCTCACAACTaGGGCATGTCACTTTTGTAT +
Preference number: 4 (lower is better)
Translates to: LLAVSLTFLWSLFNCCGFDSAHN*GMSLLY
Trigger: ATACAAAAGTGACATGCCTCAGTTGTGAGCTGAATC...AAAACCACAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GACATAATACGTAGAAATATCCTCTGCATAGACAACAACAGCTCTAGCCATTCCCGCCTCTTTACTGAATaGCACAGAATAGTACTGACA +
Preference number: 4 (lower is better)
Translates to: DIIRRNILCIDNNSSSHSRLFTE*HRIVLT
Trigger: TGTCAGTACTATTCTGTGTCATTCAGTAAAGAGGCG...GGAATGGCTAGAGCTGTTGTTGTCTATGCAGAGGATATTTCTACGTATTATGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR TCA 90 bp TATTTTCATCTTTTAACAGGGCAAGCTGATGTGTTCACATCTCAGTTTCAAGCTACAGTGTCTGCTTTTTaGCTACATGGGCCTGCATAC +
Preference number: 4 (lower is better)
Translates to: YFHLLTGQADVFTSQFQATVSAF*LHGPAY
Trigger: GTATGCAGGCCCATGTAGTCAAAAAGCAGACACTGT...AGCTTGAAACTGAGATGTGAACACATCAGCTTGCCCTGTTAAAAGATGAAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGAAAATTGTCTGGCTGCTTACAGTGTCTGCTTTTTaGCTACATGGGCCTGCATAC +
Preference number: 4 (lower is better)
Translates to: LQFVCCPQIPFLKIVWLLTVSAF*LHGPAY
Trigger: GTATGCAGGCCCATGTAGTCAAAAAGCAGACACTGT...AAGCAGCCAGACAATTTTCAAAAATGGGATTTGTGGACAACAAACGAATTGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CATACCAGACAGAAATGGATTTTCATATTTGAGCTGAGCTATTATCATGCTGGTACAGTGTCTGCTTTTTaGCTACATGGGCCTGCATAC +
Preference number: 4 (lower is better)
Translates to: HTRQKWIFIFELSYYHAGTVSAF*LHGPAY
Trigger: GTATGCAGGCCCATGTAGTCAAAAAGCAGACACTGT...ACCAGCATGATAATAGCTCAGCTCAAATATGAAAATCCATTTCTGTCTGGTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR TCA 90 bp CTTGCCATCCCTTTAAAGAAGAGAACAACATTTGAACCAGTCCAGTTAGAAAAAACAGTGTCTGCTTTTTaGCTACATGGGCCTGCATAC +
Preference number: 4 (lower is better)
Translates to: LAIPLKKRTTFEPVQLEKTVSAF*LHGPAY
Trigger: GTATGCAGGCCCATGTAGTCAAAAAGCAGACACTGT...TTTTTCTAACTGGACTGGTTCAAATGTTGTTCTCTTCTTTAAAGGGATGGCAAG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GGTATATATATGTTGGTGTGCTGTGCTGCTAGCTATTCCATGGTCTTCATCAGTCACAAATCCCATTTTTaGAAATTGTCTGGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: GIYMLVCCAASYSMVFISHKSHF*KLSGCF
Trigger: GAAGCAGCCAGACAATTTTCAAAAATGGGATTTGTG...ACTGATGAAGACCATGGAATAGCTAGCAGCACAGCACACCAACATATATATACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TTTCATCTTTTAACAGGGCAAGCTGATGTGTTCACATCTCAGTTTCAAGCTGCCCACAAATCCCATTTTTaGAAATTGTCTGGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: FHLLTGQADVFTSQFQAAHKSHF*KLSGCF
Trigger: GAAGCAGCCAGACAATTTTCAAAAATGGGATTTGTG...GGCAGCTTGAAACTGAGATGTGAACACATCAGCTTGCCCTGTTAAAAGATGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CTGGTTAGAGCTTCTATCCCGATGACTTCCCAGGTGCCTTTTGTAATAAATGTGAGATCATCATCATCTTaGCAGTGCAGTTTTGAGATA +
Preference number: 4 (lower is better)
Translates to: LVRASIPMTSQVPFVINVRSSSS*QCSFEI
Trigger: TATCTCAAAACTGCACTGTCAAGATGATGATGATCT...CACATTTATTACAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTCTAACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TTTCATCTTTTAACAGGGCAAGCTGATGTGTTCACATCTCAGTTTCAAGCTGCCGGTAATAATCTGTTGTaGAGACAGAAGTCCCTACTT +
Preference number: 4 (lower is better)
Translates to: FHLLTGQADVFTSQFQAAGNNLL*RQKSLL
Trigger: AAGTAGGGACTTCTGTCTTCACAACAGATTATTACC...GGCAGCTTGAAACTGAGATGTGAACACATCAGCTTGCCCTGTTAAAAGATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp ATTTACAATGCTTTCCCATCACCCTTGCTGTGTTTTTGTAGCACCTATAGCCATTTTAACAGGGCAAGCTaGTGTGTTCACATCTCAGTT +
Preference number: 4 (lower is better)
Translates to: IYNAFPSPLLCFCSTYSHFNRAS*CVHISV
Trigger: AACTGAGATGTGAACACATCAGCTTGCCCTGTTAAA...ATGGCTATAGGTGCTACAAAAACACAGCAAGGGTGATGGGAAAGCATTGTAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CATACCAGACAGAAATGGATTTTCATATTTGAGCTGAGCTATTATCATGCTGGTGGGCACCATTTGAACTaGGCACAGAGCAAATCATGT +
Preference number: 4 (lower is better)
Translates to: HTRQKWIFIFELSYYHAGGHHLN*AQSKSC
Trigger: ACATGATTTGCTCTGTGCTCAGTTCAAATGGTGCCC...ACCAGCATGATAATAGCTCAGCTCAAATATGAAAATCCATTTCTGTCTGGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR TCA 90 bp CATACCAGACAGAAATGGATTTTCATATTTGAGCTGAGCTATTATCATGCTGGTGCATTGGGCACCATTTaGACTGAGCACAGAGCAAAT +
Preference number: 4 (lower is better)
Translates to: HTRQKWIFIFELSYYHAGALGTI*TEHRAN
Trigger: ATTTGCTCTGTGCTCAGTTCAAATGGTGCCCAATGC...ACCAGCATGATAATAGCTCAGCTCAAATATGAAAATCCATTTCTGTCTGGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR GCA 90 bp CTGGTTAGAGCTTCTATCCCGATGACTTCCCAGGTGCCTTTTGTAATAAATGTGATTGTTCCAAACATATaGCAATTTATGACCCACTGG +
Preference number: 4 (lower is better)
Translates to: LVRASIPMTSQVPFVINVIVPNI*QFMTHW
Trigger: CCAGTGGGTCATAAATTGGCATATGTTTGGAACAAT...CACATTTATTACAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTCTAACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp CTGGTTAGAGCTTCTATCCCGATGACTTCCCAGGTGCCTTTTGTAATAAATGTGAATTCTTTCTTGTGTTaGCCATGTCACATCACACAA +
Preference number: 4 (lower is better)
Translates to: LVRASIPMTSQVPFVINVNSFLC*PCHITQ
Trigger: TTGTGTGATGTGACATGGGCAACACAAGAAAGAATT...CACATTTATTACAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTCTAACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACTGCTGTGGTTTTCTTTATCATTCACGCTaGTGTGTAGAGTATAGAGGG +
Preference number: 4 (lower is better)
Translates to: LLAVSLTFLWSLFNCCGFLYHSR*CVEYRG
Trigger: CCCTCTATACTCTACACAGCAGCGTGAATGATAAAG...AAAACCACAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TTGGTGACTGAGCTGAGAGAGTCTGTATTTACAACAAAGAACTTTACAGTTGGATCTGAAGACAGTGTCTaGTTTTTGACTACATGGGCC +
Preference number: 4 (lower is better)
Translates to: LVTELRESVFTTKNFTVGSEDSV*FLTTWA
Trigger: GGCCCATGTAGTCAAAAAGCAGACACTGTCTTCAGA...TCCAACTGTAAAGTTCTTTGTTGTAAATACAGACTCTCTCAGCTCAGTCACCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TTACAACAAAGAACTTTACAGTTGGATTCACAGCTCCTGCCTTTGGATATGGAATCTGAAGACAGTGTCTaGTTTTTGACTACATGGGCC +
Preference number: 4 (lower is better)
Translates to: LQQRTLQLDSQLLPLDMESEDSV*FLTTWA
Trigger: GGCCCATGTAGTCAAAAAGCAGACACTGTCTTCAGA...TTCCATATCCAAAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTTGTTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR GCA 90 bp CTCATCAGAGTAGAAGGAGTATTCAATAAGTGGGACTTCTGTGTCGTTAAATTGTCTGAAGACAGTGTCTaGTTTTTGACTACATGGGCC +
Preference number: 4 (lower is better)
Translates to: LIRVEGVFNKWDFCVVKLSEDSV*FLTTWA
Trigger: GGCCCATGTAGTCAAAAAGCAGACACTGTCTTCAGA...CAATTTAACGACACAGAAGTCCCACTTATTGAATACTCCTTCTACTCTGATGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR GCA 90 bp ATTTACAATGCTTTCCCATCACCCTTGCTGTGTTTTTGTAGCACCTATAGCCATAATGTTTTCTGTGCTTaGAAGGTAAGTGGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: IYNAFPSPLLCFCSTYSHNVFCA*KVSGPV
Trigger: AACTGGGCCACTTACCTTGCAAGCACAGAAAACATT...ATGGCTATAGGTGCTACAAAAACACAGCAAGGGTGATGGGAAAGCATTGTAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TTGAATTTCTGTAATGGTCAAGGTTGTCTTCTGGAGTTGGGAGACCCATGTAACAAAGCACATTTACAATaGTTTCCCATCACCCTTGCT +
Preference number: 4 (lower is better)
Translates to: LNFCNGQGCLLELGDPCNKAHLQ*FPITLA
Trigger: AGCAAGGGTGATGGGAAAGCATTGTAAATGTGCTTT...GTTACATGGGTCTCCCAACTCCAGAAGACAACCTTGACCATTACAGAAATTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TTGAAAATTGTCTGGCTGCTTCAATTTGATCTTCAACTTCAAATGTTCCCAGTCAGAACCATCTGTAGCTaGTCGTTGGATCATGCTGGT +
Preference number: 4 (lower is better)
Translates to: LKIVWLLQFDLQLQMFPVRTICS*SLDHAG
Trigger: ACCAGCATGATCCAACGAGCAGCTACAGATGGTTCT...GACTGGGAACATTTGAAGTTGAAGATCAAATTGAAGCAGCCAGACAATTTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416189.6
CDS-3UTR GCA 90 bp GACATAATACGTAGAAATATCCTCTGCATAGACAACAACAGCTCTAGCCATTCCGCATATGCGATATTGTaGTTCTTAACCCCAAACTCG +
Preference number: 4 (lower is better)
Translates to: DIIRRNILCIDNNSSSHSAYAIL*FLTPNS
Trigger: CGAGTTTGGGGTTAAGAAGCACAATATCGCATATGC...GGAATGGCTAGAGCTGTTGTTGTCTATGCAGAGGATATTTCTACGTATTATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR CCA 90 bp TCAGGGAATCTATGCAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCTCCTGCCTTTGGATATaGAACCCGTACAGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: SGNLCKASIKTIPICCFSSCLWI*NPYSLW
Trigger: CCAAAGACTGTACGGGTTCCATATCCAAAGGCAGGA...GCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTGCATAGATTCCCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp TTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGAAAATTGTCTGGCTGCTTTCCTGCCTTTGGATATaGAACCCGTACAGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: LQFVCCPQIPFLKIVWLLSCLWI*NPYSLW
Trigger: CCAAAGACTGTACGGGTTCCATATCCAAAGGCAGGA...AAGCAGCCAGACAATTTTCAAAAATGGGATTTGTGGACAACAAACGAATTGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CCA 90 bp TCACTGGTTAGAGCTTCTATCCCGATGACTTCCCAGGTGCCTTTTGTAATAAATAAAGAACTTTACAGTTaGATTCACAGCTCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: SLVRASIPMTSQVPFVINKELYS*IHSSCL
Trigger: AAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTT...ATTTATTACAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTCTAACCAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CCA 90 bp TTTCATCTTTTAACAGGGCAAGCTGATGTGTTCACATCTCAGTTTCAAGCTGCCAAAGAACTTTACAGTTaGATTCACAGCTCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: FHLLTGQADVFTSQFQAAKELYS*IHSSCL
Trigger: AAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTT...GGCAGCTTGAAACTGAGATGTGAACACATCAGCTTGCCCTGTTAAAAGATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp CAATCACATGAACAGGAGAGCAGTGTCTTGATACTCCCAGCATATGCGATATTGAGTATAGATAATCACTaGTTAGAGCTTCTATCCCGA +
Preference number: 4 (lower is better)
Translates to: QSHEQESSVLILPAYAILSIDNH*LELLSR
Trigger: TCGGGATAGAAGCTCTAACCAGTGATTATCTATACT...CAATATCGCATATGCTGGGAGTATCAAGACACTGCTCTCCTGTTCATGTGATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR CCA 90 bp TTGAAAATTGTCTGGCTGCTTCAATTTGATCTTCAACTTCAAATGTTCCCAGTCGTTGTCTTCTGGAGTTaGGAGACCCATGTAACGTTC +
Preference number: 4 (lower is better)
Translates to: LKIVWLLQFDLQLQMFPVVVFWS*ETHVTF
Trigger: GAACGTTACATGGGTCTCCCAACTCCAGAAGACAAC...GACTGGGAACATTTGAAGTTGAAGATCAAATTGAAGCAGCCAGACAATTTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CCA 90 bp AGGGAATCTATGCAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAGGTTGTCTTCTGGAGTTaGGAGACCCATGTAACGTTC +
Preference number: 4 (lower is better)
Translates to: RESMQSLHKNNSYLLFQQVVFWS*ETHVTF
Trigger: GAACGTTACATGGGTCTCCCAACTCCAGAAGACAAC...CTGCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTGCATAGATTCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp TTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACTGCTGTGGTTTTTGGGTATATATATGTTaGTGTGCTGTGCTGCTAGCT +
Preference number: 4 (lower is better)
Translates to: LLAVSLTFLWSLFNCCGFWVYIC*CAVLLA
Trigger: AGCTAGCAGCACAGCACACCAACATATATATACCCA...AAAACCACAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp AAAGAACTTTACAGTTGGATTCACAGCTCCTGCCTTTGGATATGGAACCCGTACATGAAGTGGCTCATGTaGGTATATATATGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: KELYSWIHSSCLWIWNPYMKWLM*VYICWC
Trigger: ACACCAACATATATATACCCACATGAGCCACTTCAT...GTACGGGTTCCATATCCAAAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR CCA 90 bp TTGAAAATTGTCTGGCTGCTTCAATTTGATCTTCAACTTCAAATGTTCCCAGTCCTCGTTGGATCATGCTaGTTCCTCAGTTACCTTCCA +
Preference number: 4 (lower is better)
Translates to: LKIVWLLQFDLQLQMFPVLVGSC*FLSYLP
Trigger: TGGAAGGTAACTGAGGAACCAGCATGATCCAACGAG...GACTGGGAACATTTGAAGTTGAAGATCAAATTGAAGCAGCCAGACAATTTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416189.6
CDS-3UTR TCA 90 bp AATCATAAATGTCATATGAAGCTGTGTAGGAATGCCTCCATTGCTTCACGTAGTGTTCTCCAAGAAAACTaGGCTGTTTCCATATTCAGC +
Preference number: 4 (lower is better)
Translates to: NHKCHMKLCRNASIASRSVLQEN*AVSIFS
Trigger: GCTGAATATGGAAACAGCTCAGTTTTCTTGGAGAAC...ACTACGTGAAGCAATGGAGGCATTCCTACACAGCTTCATATGACATTTATGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413651.3
ENST00000676479.1
ENST00000676624.1
CDS-3UTR TCA 90 bp TTTACAACAAAGAACTTTACAGTTGGATTCACAGCTCCTGCCTTTGGATATGGAGTTCTCCAAGAAAACTaGGCTGTTTCCATATTCAGC +
Preference number: 4 (lower is better)
Translates to: FTTKNFTVGFTAPAFGYGVLQEN*AVSIFS
Trigger: GCTGAATATGGAAACAGCTCAGTTTTCTTGGAGAAC...TCCATATCCAAAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTTGTTGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CTCATCAGAGTAGAAGGAGTATTCAATAAGTGGGACTTCTGTGTCGTTAAATTGGTTCTCCAAGAAAACTaGGCTGTTTCCATATTCAGC +
Preference number: 4 (lower is better)
Translates to: LIRVEGVFNKWDFCVVKLVLQEN*AVSIFS
Trigger: GCTGAATATGGAAACAGCTCAGTTTTCTTGGAGAAC...CAATTTAACGACACAGAAGTCCCACTTATTGAATACTCCTTCTACTCTGATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TTTCATCTTTTAACAGGGCAAGCTGATGTGTTCACATCTCAGTTTCAAGCTGCCATCATAAATGTCATATaGAGCTGTGTAGGAATGCCT +
Preference number: 4 (lower is better)
Translates to: FHLLTGQADVFTSQFQAAIINVI*SCVGMP
Trigger: AGGCATTCCTACACAGCTTCATATGACATTTATGAT...GGCAGCTTGAAACTGAGATGTGAACACATCAGCTTGCCCTGTTAAAAGATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
CDS-3UTR TCA 90 bp AACTTCAAATGTTCCCAGTCTTCTGTTGATTGCATGCATGATCTTATCTCCTTGCTTTCCCCGTCCATGTaGTTCTGTAACTTGGTAAAT +
Preference number: 4 (lower is better)
Translates to: NFKCSQSSVDCMHDLISLLSPSM*FCNLVN
Trigger: ATTTACCAAGTTACAGAATCACATGGACGGGGAAAG...CAAGGAGATAAGATCATGCATGCAATCAACAGAAGACTGGGAACATTTGAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp GACTACATGGGCCTGCATACACATCTAATAGTAGAGGATATTTCTTGGATTTATGAGCAGAGTAGGCACTaGAGACTTCCTCTTCATAAA +
Preference number: 4 (lower is better)
Translates to: DYMGLHTHLIVEDISWIYEQSRH*RLPLHK
Trigger: TTTATGAAGAGGAAGTCTTCAGTGCCTACTCTGCTC...ATAAATCCAAGAAATATCCTCTACTATTAGATGTGTATGCAGGCCCATGTAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp AGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACTGCTGTGGTTTTACTTAGAACTTTGGGTACTGCAGTaGCTCATCAGAGTAGAAGGA +
Preference number: 4 (lower is better)
Translates to: SFPYISLESFQLLWFYLELWVLQ*LIRVEG
Trigger: TCCTTCTACTCTGATGAGTCACTGCAGTACCCAAAG...TTCTAAGTAAAACCACAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGAAAATTGTCTGGCTGCTTAGTTCTGAATCCTCCTaGGCCACTGCAAAGAAATTC +
Preference number: 4 (lower is better)
Translates to: LQFVCCPQIPFLKIVWLLSSESS*ATAKKF
Trigger: GAATTTCTTTGCAGTGGCTCAGGAGGATTCAGAACT...AAGCAGCCAGACAATTTTCAAAAATGGGATTTGTGGACAACAAACGAATTGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp AGGGAATCTATGCAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAGAGTTCTGAATCCTCCTaGGCCACTGCAAAGAAATTC +
Preference number: 4 (lower is better)
Translates to: RESMQSLHKNNSYLLFQQSSESS*ATAKKF
Trigger: GAATTTCTTTGCAGTGGCTCAGGAGGATTCAGAACT...CTGCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTGCATAGATTCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TTTACAACAAAGAACTTTACAGTTGGATTCACAGCTCCTGCCTTTGGATATGGAGGTAAAATGAGGTTCTaGAGGCCTAAATCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: FTTKNFTVGFTAPAFGYGGKMRF*RPKSSN
Trigger: GTTGGAAGATTTAGGCCTTCAGAACCTCATTTTACC...TCCATATCCAAAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTTGTTGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CTCATCAGAGTAGAAGGAGTATTCAATAAGTGGGACTTCTGTGTCGTTAAATTGCCATCAAGGGTAAAATaGGGTTCTGAAGGCCTAAAT +
Preference number: 4 (lower is better)
Translates to: LIRVEGVFNKWDFCVVKLPSRVK*GSEGLN
Trigger: ATTTAGGCCTTCAGAACCTCATTTTACCCTTGATGG...CAATTTAACGACACAGAAGTCCCACTTATTGAATACTCCTTCTACTCTGATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TTGGTGACTGAGCTGAGAGAGTCTGTATTTACAACAAAGAACTTTACAGTTGGAGATTCAGCTCACAACTaGGGCATGTCACTTTTGTAT +
Preference number: 4 (lower is better)
Translates to: LVTELRESVFTTKNFTVGDSAHN*GMSLLY
Trigger: ATACAAAAGTGACATGCCTCAGTTGTGAGCTGAATC...TCCAACTGTAAAGTTCTTTGTTGTAAATACAGACTCTCTCAGCTCAGTCACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR TCA 90 bp AACTTCAAATGTTCCCAGTCTTCTGTTGATTGCATGCATGATCTTATCTCCTTGGATTCAGCTCACAACTaGGGCATGTCACTTTTGTAT +
Preference number: 4 (lower is better)
Translates to: NFKCSQSSVDCMHDLISLDSAHN*GMSLLY
Trigger: ATACAAAAGTGACATGCCTCAGTTGTGAGCTGAATC...CAAGGAGATAAGATCATGCATGCAATCAACAGAAGACTGGGAACATTTGAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CTCATCAGAGTAGAAGGAGTATTCAATAAGTGGGACTTCTGTGTCGTTAAATTGCGCCTCTTTACTGAATaGCACAGAATAGTACTGACA +
Preference number: 4 (lower is better)
Translates to: LIRVEGVFNKWDFCVVKLRLFTE*HRIVLT
Trigger: TGTCAGTACTATTCTGTGTCATTCAGTAAAGAGGCG...CAATTTAACGACACAGAAGTCCCACTTATTGAATACTCCTTCTACTCTGATGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR TCA 90 bp AACTTCAAATGTTCCCAGTCTTCTGTTGATTGCATGCATGATCTTATCTCCTTGCGCCTCTTTACTGAATaGCACAGAATAGTACTGACA +
Preference number: 4 (lower is better)
Translates to: NFKCSQSSVDCMHDLISLRLFTE*HRIVLT
Trigger: TGTCAGTACTATTCTGTGTCATTCAGTAAAGAGGCG...CAAGGAGATAAGATCATGCATGCAATCAACAGAAGACTGGGAACATTTGAAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp ATTTACAATGCTTTCCCATCACCCTTGCTGTGTTTTTGTAGCACCTATAGCCATACTTCGCCTCTTTACTaGATGACACAGAATAGTACT +
Preference number: 4 (lower is better)
Translates to: IYNAFPSPLLCFCSTYSHTSPLY*MTQNST
Trigger: AGTACTATTCTGTGTCATTCAGTAAAGAGGCGAAGT...ATGGCTATAGGTGCTACAAAAACACAGCAAGGGTGATGGGAAAGCATTGTAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp AATATCCATGACCGAATAGTTCTGAATCCTCCTGAGCCACTGCAAAGAAATTCTACTTCGCCTCTTTACTaGATGACACAGAATAGTACT +
Preference number: 4 (lower is better)
Translates to: NIHDRIVLNPPEPLQRNSTSPLY*MTQNST
Trigger: AGTACTATTCTGTGTCATTCAGTAAAGAGGCGAAGT...AGAATTTCTTTGCAGTGGCTCAGGAGGATTCAGAACTATTCGGTCATGGATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp ATTTACAATGCTTTCCCATCACCCTTGCTGTGTTTTTGTAGCACCTATAGCCATCACAAATCCCATTTTTaGAAATTGTCTGGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: IYNAFPSPLLCFCSTYSHHKSHF*KLSGCF
Trigger: GAAGCAGCCAGACAATTTTCAAAAATGGGATTTGTG...ATGGCTATAGGTGCTACAAAAACACAGCAAGGGTGATGGGAAAGCATTGTAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CATATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGCACAAATCCCATTTTTaGAAATTGTCTGGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: HMTSPKLQFVCCPQIPFLHKSHF*KLSGCF
Trigger: GAAGCAGCCAGACAATTTTCAAAAATGGGATTTGTG...CAAAAATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TTTCATCTTTTAACAGGGCAAGCTGATGTGTTCACATCTCAGTTTCAAGCTGCCAGATCATCATCATCTTaGCAGTGCAGTTTTGAGATA +
Preference number: 4 (lower is better)
Translates to: FHLLTGQADVFTSQFQAARSSSS*QCSFEI
Trigger: TATCTCAAAACTGCACTGTCAAGATGATGATGATCT...GGCAGCTTGAAACTGAGATGTGAACACATCAGCTTGCCCTGTTAAAAGATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TCACTGGTTAGAGCTTCTATCCCGATGACTTCCCAGGTGCCTTTTGTAATAAATGAAGAGAACAACATTTaGACCAGTCCAGTTAGAAAA +
Preference number: 4 (lower is better)
Translates to: SLVRASIPMTSQVPFVINEENNI*TSPVRK
Trigger: TTTTCTAACTGGACTGGTTCAAATGTTGTTCTCTTC...ATTTATTACAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTCTAACCAGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CATAAATGTCATATGAAGCTGTGTAGGAATGCCTCCATTGCTTCACGTAGTTGTATCCACTTTGCCATATaGAATGTACTGTTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: HKCHMKLCRNASIASRSCIHFAI*NVLFSK
Trigger: CTTGGAGAACAGTACATTTCATATGGCAAAGTGGAT...ACAACTACGTGAAGCAATGGAGGCATTCCTACACAGCTTCATATGACATTTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413651.3
ENST00000676479.1
ENST00000676624.1
CDS-3UTR GCA 90 bp TTTCATCTTTTAACAGGGCAAGCTGATGTGTTCACATCTCAGTTTCAAGCTGCCATTGTTCCAAACATATaGCAATTTATGACCCACTGG +
Preference number: 4 (lower is better)
Translates to: FHLLTGQADVFTSQFQAAIVPNI*QFMTHW
Trigger: CCAGTGGGTCATAAATTGGCATATGTTTGGAACAAT...GGCAGCTTGAAACTGAGATGTGAACACATCAGCTTGCCCTGTTAAAAGATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp CATATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGATCCTCCTGAGCCACTaGAAAGAAATTCTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: HMTSPKLQFVCCPQIPFLILLSH*KEILSC
Trigger: ACAAGAAAGAATTTCTTTGCAGTGGCTCAGGAGGAT...CAAAAATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp AGGGAATCTATGCAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAGCTCATTTCAATGTGTTaGCGTGCCACTAAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: RESMQSLHKNNSYLLFQQLISMC*RATKQF
Trigger: GAACTGCTTAGTGGCACGGCAACACATTGAAATGAG...CTGCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTGCATAGATTCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TCAGGGAATCTATGCAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCCTCATTTCAATGTGTTaGCGTGCCACTAAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: SGNLCKASIKTIPICCFSLISMC*RATKQF
Trigger: GAACTGCTTAGTGGCACGGCAACACATTGAAATGAG...GCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTGCATAGATTCCCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp CTCATCAGAGTAGAAGGAGTATTCAATAAGTGGGACTTCTGTGTCGTTAAATTGCTTTATCATTCACGCTaGTGTGTAGAGTATAGAGGG +
Preference number: 4 (lower is better)
Translates to: LIRVEGVFNKWDFCVVKLLYHSR*CVEYRG
Trigger: CCCTCTATACTCTACACAGCAGCGTGAATGATAAAG...CAATTTAACGACACAGAAGTCCCACTTATTGAATACTCCTTCTACTCTGATGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR GCA 90 bp CAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAGCTGATGCAGAAATCTGAAGACAGTGTCTaGTTTTTGACTACATGGGCC +
Preference number: 4 (lower is better)
Translates to: QSLHKNNSYLLFQQLMQKSEDSV*FLTTWA
Trigger: GGCCCATGTAGTCAAAAAGCAGACACTGTCTTCAGA...TTTCTGCATCAGCTGCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACTGCTGTGGTTTTCTTCTGTTGATTGCATaGATGATCTTATCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: LLAVSLTFLWSLFNCCGFLLLIA*MILSPW
Trigger: CCAAGGAGATAAGATCATGCATGCAATCAACAGAAG...AAAACCACAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp AATATCCATGACCGAATAGTTCTGAATCCTCCTGAGCCACTGCAAAGAAATTCTCTTCTGTTGATTGCATaGATGATCTTATCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: NIHDRIVLNPPEPLQRNSLLLIA*MILSPW
Trigger: CCAAGGAGATAAGATCATGCATGCAATCAACAGAAG...AGAATTTCTTTGCAGTGGCTCAGGAGGATTCAGAACTATTCGGTCATGGATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp GACATAATACGTAGAAATATCCTCTGCATAGACAACAACAGCTCTAGCCATTCCGTGAACGTTATCATCTaGTGTTCCATGAATAAGGAG +
Preference number: 4 (lower is better)
Translates to: DIIRRNILCIDNNSSSHSVNVII*CSMNKE
Trigger: CTCCTTATTCATGGAACAGCAGATGATAACGTTCAC...GGAATGGCTAGAGCTGTTGTTGTCTATGCAGAGGATATTTCTACGTATTATGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR GCA 90 bp ATTTACAATGCTTTCCCATCACCCTTGCTGTGTTTTTGTAGCACCTATAGCCATGTGAACGTTATCATCTaGTGTTCCATGAATAAGGAG +
Preference number: 4 (lower is better)
Translates to: IYNAFPSPLLCFCSTYSHVNVII*CSMNKE
Trigger: CTCCTTATTCATGGAACAGCAGATGATAACGTTCAC...ATGGCTATAGGTGCTACAAAAACACAGCAAGGGTGATGGGAAAGCATTGTAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TTTACAACAAAGAACTTTACAGTTGGATTCACAGCTCCTGCCTTTGGATATGGAATCAGTATACCACATTaGCTGGAAATCCACTCCAAC +
Preference number: 4 (lower is better)
Translates to: FTTKNFTVGFTAPAFGYGISIPH*LEIHSN
Trigger: GTTGGAGTGGATTTCCAGGCAATGTGGTATACTGAT...TCCATATCCAAAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTTGTTGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TCAGGGAATCTATGCAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCTCACTGCCCACATCTTaGCATCCCTTTAAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: SGNLCKASIKTIPICCFSSLPTS*HPFKEE
Trigger: CTCTTCTTTAAAGGGATGGCAAGATGTGGGCAGTGA...GCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTGCATAGATTCCCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp AGGGAATCTATGCAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAGTCACTGCCCACATCTTaGCATCCCTTTAAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: RESMQSLHKNNSYLLFQQSLPTS*HPFKEE
Trigger: CTCTTCTTTAAAGGGATGGCAAGATGTGGGCAGTGA...CTGCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTGCATAGATTCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp AGGGAATCTATGCAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAGTTTCTCAGAAAACTGTaGCAGTCTGGCTGTGAACAG +
Preference number: 4 (lower is better)
Translates to: RESMQSLHKNNSYLLFQQFLRKL*QSGCEQ
Trigger: CTGTTCACAGCCAGACTGGCACAGTTTTCTGAGAAA...CTGCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTGCATAGATTCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp ATTTACAATGCTTTCCCATCACCCTTGCTGTGTTTTTGTAGCACCTATAGCCATAAAGCACATTTACAATaGTTTCCCATCACCCTTGCT +
Preference number: 4 (lower is better)
Translates to: IYNAFPSPLLCFCSTYSHKAHLQ*FPITLA
Trigger: AGCAAGGGTGATGGGAAAGCATTGTAAATGTGCTTT...ATGGCTATAGGTGCTACAAAAACACAGCAAGGGTGATGGGAAAGCATTGTAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp AGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACTGCTGTGGTTTTACTTAGAATCCTGCCTTTGGATATaGAACCCGTACAGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: SFPYISLESFQLLWFYLESCLWI*NPYSLW
Trigger: CCAAAGACTGTACGGGTTCCATATCCAAAGGCAGGA...TTCTAAGTAAAACCACAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp TACATGGGCCTGCATACACATCTAATAGTAGAGGATATTTCTTGGATTTATCAAGTTGTCTTCTGGAGTTaGGAGACCCATGTAACGTTC +
Preference number: 4 (lower is better)
Translates to: YMGLHTHLIVEDISWIYQVVFWS*ETHVTF
Trigger: GAACGTTACATGGGTCTCCCAACTCCAGAAGACAAC...TTGATAAATCCAAGAAATATCCTCTACTATTAGATGTGTATGCAGGCCCATGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CCA 90 bp CAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAGCTGATGCAGAAAGTATACCACATTGCCTaGAAATCCACTCCAACATCG +
Preference number: 4 (lower is better)
Translates to: QSLHKNNSYLLFQQLMQKVYHIA*KSTPTS
Trigger: CGATGTTGGAGTGGATTTCCAGGCAATGTGGTATAC...TTTCTGCATCAGCTGCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp TTACAACAAAGAACTTTACAGTTGGATTCACAGCTCCTGCCTTTGGATATGGAACTGCTAGCTATTCCATaGTCTTCATCAGTATACCAC +
Preference number: 4 (lower is better)
Translates to: LQQRTLQLDSQLLPLDMELLAIP*SSSVYH
Trigger: GTGGTATACTGATGAAGACCATGGAATAGCTAGCAG...TTCCATATCCAAAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTTGTTGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR CCA 90 bp TTTCATCTTTTAACAGGGCAAGCTGATGTGTTCACATCTCAGTTTCAAGCTGCCATGAAGTGGCTCATGTaGGTATATATATGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: FHLLTGQADVFTSQFQAAMKWLM*VYICWC
Trigger: ACACCAACATATATATACCCACATGAGCCACTTCAT...GGCAGCTTGAAACTGAGATGTGAACACATCAGCTTGCCCTGTTAAAAGATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp AAAACACCCAATCCATTTCCAAATTTGACTCAAAGGGCGCTTACACAGCATGCAACCTTGTTAAATAATTaGGAAGTCATTACCGGGCAA +
Preference number: 4 (lower is better)
Translates to: KTPNPFPNLTQRALTQHATLLNN*EVITGQ
Trigger: TTGCCCGGTAATGACTTCCCAATTATTTAACAAGGT...TGCATGCTGTGTAAGCGCCCTTTGAGTCAAATTTGGAAATGGATTGGGTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR TCA 90 bp TTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGAAAATTGTCTGGCTGCTTGTTCTCCAAGAAAACTaGGCTGTTTCCATATTCAGC +
Preference number: 4 (lower is better)
Translates to: LQFVCCPQIPFLKIVWLLVLQEN*AVSIFS
Trigger: GCTGAATATGGAAACAGCTCAGTTTTCTTGGAGAAC...AAGCAGCCAGACAATTTTCAAAAATGGGATTTGTGGACAACAAACGAATTGCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CATAAATGTCATATGAAGCTGTGTAGGAATGCCTCCATTGCTTCACGTAGTTGTATCATAAATGTCATATaGAGCTGTGTAGGAATGCCT +
Preference number: 4 (lower is better)
Translates to: HKCHMKLCRNASIASRSCIINVI*SCVGMP
Trigger: AGGCATTCCTACACAGCTTCATATGACATTTATGAT...ACAACTACGTGAAGCAATGGAGGCATTCCTACACAGCTTCATATGACATTTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413651.3
ENST00000676479.1
ENST00000676624.1
CDS-3UTR TCA 90 bp AGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACTGCTGTGGTTTTACTTAGAAAGTTCTGAATCCTCCTaGGCCACTGCAAAGAAATTC +
Preference number: 4 (lower is better)
Translates to: SFPYISLESFQLLWFYLESSESS*ATAKKF
Trigger: GAATTTCTTTGCAGTGGCTCAGGAGGATTCAGAACT...TTCTAAGTAAAACCACAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TACATGGGCCTGCATACACATCTAATAGTAGAGGATATTTCTTGGATTTATCAAAGTTCTGAATCCTCCTaGGCCACTGCAAAGAAATTC +
Preference number: 4 (lower is better)
Translates to: YMGLHTHLIVEDISWIYQSSESS*ATAKKF
Trigger: GAATTTCTTTGCAGTGGCTCAGGAGGATTCAGAACT...TTGATAAATCCAAGAAATATCCTCTACTATTAGATGTGTATGCAGGCCCATGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp AACTTCAAATGTTCCCAGTCTTCTGTTGATTGCATGCATGATCTTATCTCCTTGAGTCACAAATATCCATaGCCGAATAGTTCTGAATCC +
Preference number: 4 (lower is better)
Translates to: NFKCSQSSVDCMHDLISLSHKYP*PNSSES
Trigger: GGATTCAGAACTATTCGGTCATGGATATTTGTGACT...CAAGGAGATAAGATCATGCATGCAATCAACAGAAGACTGGGAACATTTGAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TATTTTCATCTTTTAACAGGGCAAGCTGATGTGTTCACATCTCAGTTTCAAGCTGGTAAAATGAGGTTCTaGAGGCCTAAATCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: YFHLLTGQADVFTSQFQAGKMRF*RPKSSN
Trigger: GTTGGAAGATTTAGGCCTTCAGAACCTCATTTTACC...AGCTTGAAACTGAGATGTGAACACATCAGCTTGCCCTGTTAAAAGATGAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CTTGCCATCCCTTTAAAGAAGAGAACAACATTTGAACCAGTCCAGTTAGAAAAACCATCAAGGGTAAAATaGGGTTCTGAAGGCCTAAAT +
Preference number: 4 (lower is better)
Translates to: LAIPLKKRTTFEPVQLEKPSRVK*GSEGLN
Trigger: ATTTAGGCCTTCAGAACCTCATTTTACCCTTGATGG...TTTTTCTAACTGGACTGGTTCAAATGTTGTTCTCTTCTTTAAAGGGATGGCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TCAGGGAATCTATGCAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCGATTCAGCTCACAACTaGGGCATGTCACTTTTGTAT +
Preference number: 4 (lower is better)
Translates to: SGNLCKASIKTIPICCFSDSAHN*GMSLLY
Trigger: ATACAAAAGTGACATGCCTCAGTTGTGAGCTGAATC...GCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTGCATAGATTCCCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp AGAAGGAGAGAAAGATCCACTTTGCCATATGAAATGTACTGTTCTCCAAGAAAACGCCTCTTTACTGAATaGCACAGAATAGTACTGACA +
Preference number: 4 (lower is better)
Translates to: RRRERSTLPYEMYCSPRKRLFTE*HRIVLT
Trigger: TGTCAGTACTATTCTGTGTCATTCAGTAAAGAGGCG...TTTTCTTGGAGAACAGTACATTTCATATGGCAAAGTGGATCTTTCTCTCCTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676479.1
CDS-3UTR TCA 90 bp TATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGAAACTTCGCCTCTTTACTaGATGACACAGAATAGTACT +
Preference number: 4 (lower is better)
Translates to: YDQPQIAIRLLSTNPIFETSPLY*MTQNST
Trigger: AGTACTATTCTGTGTCATTCAGTAAAGAGGCGAAGT...TTCAAAAATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp AATATCCATGACCGAATAGTTCTGAATCCTCCTGAGCCACTGCAAAGAAATTCTAGAAACATTGTTTTATaGAGTGGCTCATGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: NIHDRIVLNPPEPLQRNSRNIVL*SGSCGY
Trigger: ATACCCACATGAGCCACTTCATAAAACAATGTTTCT...AGAATTTCTTTGCAGTGGCTCAGGAGGATTCAGAACTATTCGGTCATGGATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TTACAACAAAGAACTTTACAGTTGGATTCACAGCTCCTGCCTTTGGATATGGAAGGTAATAATCTGTTGTaGAGACAGAAGTCCCTACTT +
Preference number: 4 (lower is better)
Translates to: LQQRTLQLDSQLLPLDMEGNNLL*RQKSLL
Trigger: AAGTAGGGACTTCTGTCTTCACAACAGATTATTACC...TTCCATATCCAAAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTTGTTGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACTGCTGTGGTTTTGAAGAGAACAACATTTaGACCAGTCCAGTTAGAAAA +
Preference number: 4 (lower is better)
Translates to: LLAVSLTFLWSLFNCCGFEENNI*TSPVRK
Trigger: TTTTCTAACTGGACTGGTTCAAATGTTGTTCTCTTC...AAAACCACAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CTTGCCATCCCTTTAAAGAAGAGAACAACATTTGAACCAGTCCAGTTAGAAAAATTTAACAGGGCAAGCTaGTGTGTTCACATCTCAGTT +
Preference number: 4 (lower is better)
Translates to: LAIPLKKRTTFEPVQLEKFNRAS*CVHISV
Trigger: AACTGAGATGTGAACACATCAGCTTGCCCTGTTAAA...TTTTTCTAACTGGACTGGTTCAAATGTTGTTCTCTTCTTTAAAGGGATGGCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CTCATCAGAGTAGAAGGAGTATTCAATAAGTGGGACTTCTGTGTCGTTAAATTGATCCACTTTGCCATATaGAATGTACTGTTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: LIRVEGVFNKWDFCVVKLIHFAI*NVLFSK
Trigger: CTTGGAGAACAGTACATTTCATATGGCAAAGTGGAT...CAATTTAACGACACAGAAGTCCCACTTATTGAATACTCCTTCTACTCTGATGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416189.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR TCA 90 bp AATATCCATGACCGAATAGTTCTGAATCCTCCTGAGCCACTGCAAAGAAATTCTTTGGATGCTATTCAGTaGTTTAGGTTTAGGGCTTTT +
Preference number: 4 (lower is better)
Translates to: NIHDRIVLNPPEPLQRNSLDAIQ*FRFRAF
Trigger: AAAAGCCCTAAACCTAAATCACTGAATAGCATCCAA...AGAATTTCTTTGCAGTGGCTCAGGAGGATTCAGAACTATTCGGTCATGGATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494507.2
CDS-3UTR TCA 90 bp CATACCAGACAGAAATGGATTTTCATATTTGAGCTGAGCTATTATCATGCTGGTATCCATTTCCAAATTTaGCTCAAAGGGCGCTTACAC +
Preference number: 4 (lower is better)
Translates to: HTRQKWIFIFELSYYHAGIHFQI*LKGRLH
Trigger: GTGTAAGCGCCCTTTGAGTCAAATTTGGAAATGGAT...ACCAGCATGATAATAGCTCAGCTCAAATATGAAAATCCATTTCTGTCTGGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR GCA 90 bp GGTATATATATGTTGGTGTGCTGTGCTGCTAGCTATTCCATGGTCTTCATCAGTTCTAAGAGAATAAACTaGCCATCAGGAGATATTGAA +
Preference number: 4 (lower is better)
Translates to: GIYMLVCCAASYSMVFISSKRIN*PSGDIE
Trigger: TTCAATATCTCCTGATGGGCAGTTTATTCTCTTAGA...ACTGATGAAGACCATGGAATAGCTAGCAGCACAGCACACCAACATATATATACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp AATATCCATGACCGAATAGTTCTGAATCCTCCTGAGCCACTGCAAAGAAATTCTAATTCTTTCTTGTGTTaGCCATGTCACATCACACAA +
Preference number: 4 (lower is better)
Translates to: NIHDRIVLNPPEPLQRNSNSFLC*PCHITQ
Trigger: TTGTGTGATGTGACATGGGCAACACAAGAAAGAATT...AGAATTTCTTTGCAGTGGCTCAGGAGGATTCAGAACTATTCGGTCATGGATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp CTCATCAGAGTAGAAGGAGTATTCAATAAGTGGGACTTCTGTGTCGTTAAATTGATCCTCCTGAGCCACTaGAAAGAAATTCTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: LIRVEGVFNKWDFCVVKLILLSH*KEILSC
Trigger: ACAAGAAAGAATTTCTTTGCAGTGGCTCAGGAGGAT...CAATTTAACGACACAGAAGTCCCACTTATTGAATACTCCTTCTACTCTGATGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGAAAATTGTCTGGCTGCTTCTTTATCATTCACGCTaGTGTGTAGAGTATAGAGGG +
Preference number: 4 (lower is better)
Translates to: LQFVCCPQIPFLKIVWLLLYHSR*CVEYRG
Trigger: CCCTCTATACTCTACACAGCAGCGTGAATGATAAAG...AAGCAGCCAGACAATTTTCAAAAATGGGATTTGTGGACAACAAACGAATTGCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp CTTGCCATCCCTTTAAAGAAGAGAACAACATTTGAACCAGTCCAGTTAGAAAAACTTTATCATTCACGCTaGTGTGTAGAGTATAGAGGG +
Preference number: 4 (lower is better)
Translates to: LAIPLKKRTTFEPVQLEKLYHSR*CVEYRG
Trigger: CCCTCTATACTCTACACAGCAGCGTGAATGATAAAG...TTTTTCTAACTGGACTGGTTCAAATGTTGTTCTCTTCTTTAAAGGGATGGCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp CAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAGCTGATGCAGAAACTTTATCATTCACGCTaGTGTGTAGAGTATAGAGGG +
Preference number: 4 (lower is better)
Translates to: QSLHKNNSYLLFQQLMQKLYHSR*CVEYRG
Trigger: CCCTCTATACTCTACACAGCAGCGTGAATGATAAAG...TTTCTGCATCAGCTGCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TCAGGGAATCTATGCAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAATGTTTTCTGTGCTTaGAAGGTAAGTGGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: SGNLCKASIKTIPICCFSNVFCA*KVSGPV
Trigger: AACTGGGCCACTTACCTTGCAAGCACAGAAAACATT...GCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTGCATAGATTCCCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TTTACAACAAAGAACTTTACAGTTGGATTCACAGCTCCTGCCTTTGGATATGGACTTCTGTTGATTGCATaGATGATCTTATCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: FTTKNFTVGFTAPAFGYGLLLIA*MILSPW
Trigger: CCAAGGAGATAAGATCATGCATGCAATCAACAGAAG...TCCATATCCAAAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTTGTTGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGAAGTGAACGTTATCATCTaGTGTTCCATGAATAAGGAG +
Preference number: 4 (lower is better)
Translates to: YDQPQIAIRLLSTNPIFEVNVII*CSMNKE
Trigger: CTCCTTATTCATGGAACAGCAGATGATAACGTTCAC...TTCAAAAATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp AGGGAATCTATGCAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAGATCAGTATACCACATTaGCTGGAAATCCACTCCAAC +
Preference number: 4 (lower is better)
Translates to: RESMQSLHKNNSYLLFQQISIPH*LEIHSN
Trigger: GTTGGAGTGGATTTCCAGGCAATGTGGTATACTGAT...CTGCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTGCATAGATTCCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TTTACAACAAAGAACTTTACAGTTGGATTCACAGCTCCTGCCTTTGGATATGGAAAAGCACATTTACAATaGTTTCCCATCACCCTTGCT +
Preference number: 4 (lower is better)
Translates to: FTTKNFTVGFTAPAFGYGKAHLQ*FPITLA
Trigger: AGCAAGGGTGATGGGAAAGCATTGTAAATGTGCTTT...TCCATATCCAAAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTTGTTGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR CCA 90 bp TTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACTGCTGTGGTTTTAGTATAGATAATCACTaGTTAGAGCTTCTATCCCGA +
Preference number: 4 (lower is better)
Translates to: LLAVSLTFLWSLFNCCGFSIDNH*LELLSR
Trigger: TCGGGATAGAAGCTCTAACCAGTGATTATCTATACT...AAAACCACAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp TTGGTGACTGAGCTGAGAGAGTCTGTATTTACAACAAAGAACTTTACAGTTGGATTTTTGGAGGGCATCTaGACATTCTGCAGCATTTTA +
Preference number: 4 (lower is better)
Translates to: LVTELRESVFTTKNFTVGFLEGI*TFCSIL
Trigger: TAAAATGCTGCAGAATGTCCAGATGCCCTCCAAAAA...TCCAACTGTAAAGTTCTTTGTTGTAAATACAGACTCTCTCAGCTCAGTCACCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR CCA 90 bp CTTGCCATCCCTTTAAAGAAGAGAACAACATTTGAACCAGTCCAGTTAGAAAAACTGCTAGCTATTCCATaGTCTTCATCAGTATACCAC +
Preference number: 4 (lower is better)
Translates to: LAIPLKKRTTFEPVQLEKLLAIP*SSSVYH
Trigger: GTGGTATACTGATGAAGACCATGGAATAGCTAGCAG...TTTTTCTAACTGGACTGGTTCAAATGTTGTTCTCTTCTTTAAAGGGATGGCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp CAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAGCTGATGCAGAAACTGCTAGCTATTCCATaGTCTTCATCAGTATACCAC +
Preference number: 4 (lower is better)
Translates to: QSLHKNNSYLLFQQLMQKLLAIP*SSSVYH
Trigger: GTGGTATACTGATGAAGACCATGGAATAGCTAGCAG...TTTCTGCATCAGCTGCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp AGGGAATCTATGCAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAGTGGGTATATATATGTTaGTGTGCTGTGCTGCTAGCT +
Preference number: 4 (lower is better)
Translates to: RESMQSLHKNNSYLLFQQWVYIC*CAVLLA
Trigger: AGCTAGCAGCACAGCACACCAACATATATATACCCA...CTGCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTGCATAGATTCCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp AGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACTGCTGTGGTTTTACTTAGAACAACTCCAGAGAAAATaGATGCTTCCGTACTGCTGT +
Preference number: 4 (lower is better)
Translates to: SFPYISLESFQLLWFYLEQLQRK*MLPYCC
Trigger: ACAGCAGTACGGAAGCATCCATTTTCTCTGGAGTTG...TTCTAAGTAAAACCACAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000678566.1
CDS-3UTR TCA 90 bp CAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAGCTGATGCAGAAAAGTCACAAATATCCATaGCCGAATAGTTCTGAATCC +
Preference number: 4 (lower is better)
Translates to: QSLHKNNSYLLFQQLMQKSHKYP*PNSSES
Trigger: GGATTCAGAACTATTCGGTCATGGATATTTGTGACT...TTTCTGCATCAGCTGCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAGCTGATGCAGAAAAATGGCATGGTATTTTaGGGTGCTAAGGTAAAGAGA +
Preference number: 4 (lower is better)
Translates to: QSLHKNNSYLLFQQLMQKNGMVF*GAKVKR
Trigger: TCTCTTTACCTTAGCACCTCAAAATACCATGCCATT...TTTCTGCATCAGCTGCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAGCTGATGCAGAAAGGTAATAATCTGTTGTaGAGACAGAAGTCCCTACTT +
Preference number: 4 (lower is better)
Translates to: QSLHKNNSYLLFQQLMQKGNNLL*RQKSLL
Trigger: AAGTAGGGACTTCTGTCTTCACAACAGATTATTACC...TTTCTGCATCAGCTGCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TCAGGGAATCTATGCAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCGGTAATAATCTGTTGTaGAGACAGAAGTCCCTACTT +
Preference number: 4 (lower is better)
Translates to: SGNLCKASIKTIPICCFSGNNLL*RQKSLL
Trigger: AAGTAGGGACTTCTGTCTTCACAACAGATTATTACC...GCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTGCATAGATTCCCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGAAGAAGAGAACAACATTTaGACCAGTCCAGTTAGAAAA +
Preference number: 4 (lower is better)
Translates to: YDQPQIAIRLLSTNPIFEEENNI*TSPVRK
Trigger: TTTTCTAACTGGACTGGTTCAAATGTTGTTCTCTTC...TTCAAAAATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TATTTTCATCTTTTAACAGGGCAAGCTGATGTGTTCACATCTCAGTTTCAAGCTATCCACTTTGCCATATaGAATGTACTGTTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: YFHLLTGQADVFTSQFQAIHFAI*NVLFSK
Trigger: CTTGGAGAACAGTACATTTCATATGGCAAAGTGGAT...AGCTTGAAACTGAGATGTGAACACATCAGCTTGCCCTGTTAAAAGATGAAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR GCA 90 bp CATATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGTCTAAGAGAATAAACTaGCCATCAGGAGATATTGAA +
Preference number: 4 (lower is better)
Translates to: HMTSPKLQFVCCPQIPFLSKRIN*PSGDIE
Trigger: TTCAATATCTCCTGATGGGCAGTTTATTCTCTTAGA...CAAAAATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp GACATAATACGTAGAAATATCCTCTGCATAGACAACAACAGCTCTAGCCATTCCTCTAAGAGAATAAACTaGCCATCAGGAGATATTGAA +
Preference number: 4 (lower is better)
Translates to: DIIRRNILCIDNNSSSHSSKRIN*PSGDIE
Trigger: TTCAATATCTCCTGATGGGCAGTTTATTCTCTTAGA...GGAATGGCTAGAGCTGTTGTTGTCTATGCAGAGGATATTTCTACGTATTATGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR GCA 90 bp TATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGAAATTGTTCCAAACATATaGCAATTTATGACCCACTGG +
Preference number: 4 (lower is better)
Translates to: YDQPQIAIRLLSTNPIFEIVPNI*QFMTHW
Trigger: CCAGTGGGTCATAAATTGGCATATGTTTGGAACAAT...TTCAAAAATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TTGGTGACTGAGCTGAGAGAGTCTGTATTTACAACAAAGAACTTTACAGTTGGAAATTCTTTCTTGTGTTaGCCATGTCACATCACACAA +
Preference number: 4 (lower is better)
Translates to: LVTELRESVFTTKNFTVGNSFLC*PCHITQ
Trigger: TTGTGTGATGTGACATGGGCAACACAAGAAAGAATT...TCCAACTGTAAAGTTCTTTGTTGTAAATACAGACTCTCTCAGCTCAGTCACCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR GCA 90 bp CATACCAGACAGAAATGGATTTTCATATTTGAGCTGAGCTATTATCATGCTGGTATCCTCCTGAGCCACTaGAAAGAAATTCTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: HTRQKWIFIFELSYYHAGILLSH*KEILSC
Trigger: ACAAGAAAGAATTTCTTTGCAGTGGCTCAGGAGGAT...ACCAGCATGATAATAGCTCAGCTCAAATATGAAAATCCATTTCTGTCTGGTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR GCA 90 bp TATTTTCATCTTTTAACAGGGCAAGCTGATGTGTTCACATCTCAGTTTCAAGCTATCCTCCTGAGCCACTaGAAAGAAATTCTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: YFHLLTGQADVFTSQFQAILLSH*KEILSC
Trigger: ACAAGAAAGAATTTCTTTGCAGTGGCTCAGGAGGAT...AGCTTGAAACTGAGATGTGAACACATCAGCTTGCCCTGTTAAAAGATGAAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TCAGGGAATCTATGCAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCCTTCTGTTGATTGCATaGATGATCTTATCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: SGNLCKASIKTIPICCFSLLLIA*MILSPW
Trigger: CCAAGGAGATAAGATCATGCATGCAATCAACAGAAG...GCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTGCATAGATTCCCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR GCA 90 bp TATTTTCATCTTTTAACAGGGCAAGCTGATGTGTTCACATCTCAGTTTCAAGCTGTGAACGTTATCATCTaGTGTTCCATGAATAAGGAG +
Preference number: 4 (lower is better)
Translates to: YFHLLTGQADVFTSQFQAVNVII*CSMNKE
Trigger: CTCCTTATTCATGGAACAGCAGATGATAACGTTCAC...AGCTTGAAACTGAGATGTGAACACATCAGCTTGCCCTGTTAAAAGATGAAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp TCTAATAGCTTGTTCGTTCAAGCCAGAAAGTCAGGTTTGAATATAGATTCGTACCCACTGTGTGTTGTTTaGAATCCTCTCTTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: SNSLFVQARKSGLNIDSYPLCVV*NPLFCN
Trigger: ATTACAGAAGAGAGGATTCCAAACAACACACAGTGG...GTACGAATCTATATTCAAACCTGACTTTCTGGCTTGAACGAACAAGCTATTAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434918.6
ENST00000678566.1
CDS-3UTR CCA 90 bp TATTTTCATCTTTTAACAGGGCAAGCTGATGTGTTCACATCTCAGTTTCAAGCTCCACTGTGTGTTGTTTaGAATCCTCTCTTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: YFHLLTGQADVFTSQFQAPLCVV*NPLFCN
Trigger: ATTACAGAAGAGAGGATTCCAAACAACACACAGTGG...AGCTTGAAACTGAGATGTGAACACATCAGCTTGCCCTGTTAAAAGATGAAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp TTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGAAAATTGTCTGGCTGCTTAAAGAACTTTACAGTTaGATTCACAGCTCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: LQFVCCPQIPFLKIVWLLKELYS*IHSSCL
Trigger: AAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTT...AAGCAGCCAGACAATTTTCAAAAATGGGATTTGTGGACAACAAACGAATTGCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CCA 90 bp TTTACAACAAAGAACTTTACAGTTGGATTCACAGCTCCTGCCTTTGGATATGGAAGTTCCATCTTCCACTaGATTCATCATAGTCACAAA +
Preference number: 4 (lower is better)
Translates to: FTTKNFTVGFTAPAFGYGSSIFH*IHHSHK
Trigger: TTTGTGACTATGATGAATCCAGTGGAAGATGGAACT...TCCATATCCAAAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTTGTTGTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR CCA 90 bp TTACAACAAAGAACTTTACAGTTGGATTCACAGCTCCTGCCTTTGGATATGGAAAGTATAGATAATCACTaGTTAGAGCTTCTATCCCGA +
Preference number: 4 (lower is better)
Translates to: LQQRTLQLDSQLLPLDMESIDNH*LELLSR
Trigger: TCGGGATAGAAGCTCTAACCAGTGATTATCTATACT...TTCCATATCCAAAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTTGTTGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR CCA 90 bp TTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGAAAATTGTCTGGCTGCTTTTTTTGGAGGGCATCTaGACATTCTGCAGCATTTTA +
Preference number: 4 (lower is better)
Translates to: LQFVCCPQIPFLKIVWLLFLEGI*TFCSIL
Trigger: TAAAATGCTGCAGAATGTCCAGATGCCCTCCAAAAA...AAGCAGCCAGACAATTTTCAAAAATGGGATTTGTGGACAACAAACGAATTGCAA
38% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CCA 90 bp AGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACTGCTGTGGTTTTACTTAGAATGGGTATATATATGTTaGTGTGCTGTGCTGCTAGCT +
Preference number: 4 (lower is better)
Translates to: SFPYISLESFQLLWFYLEWVYIC*CAVLLA
Trigger: AGCTAGCAGCACAGCACACCAACATATATATACCCA...TTCTAAGTAAAACCACAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CATACCAGACAGAAATGGATTTTCATATTTGAGCTGAGCTATTATCATGCTGGTATCATAAATGTCATATaGAGCTGTGTAGGAATGCCT +
Preference number: 4 (lower is better)
Translates to: HTRQKWIFIFELSYYHAGIINVI*SCVGMP
Trigger: AGGCATTCCTACACAGCTTCATATGACATTTATGAT...ACCAGCATGATAATAGCTCAGCTCAAATATGAAAATCCATTTCTGTCTGGTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR TCA 90 bp AGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACTGCTGTGGTTTTACTTAGAAAGTCACAAATATCCATaGCCGAATAGTTCTGAATCC +
Preference number: 4 (lower is better)
Translates to: SFPYISLESFQLLWFYLESHKYP*PNSSES
Trigger: GGATTCAGAACTATTCGGTCATGGATATTTGTGACT...TTCTAAGTAAAACCACAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp CAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAGCTGATGCAGAAAGAAGAGAACAACATTTaGACCAGTCCAGTTAGAAAA +
Preference number: 4 (lower is better)
Translates to: QSLHKNNSYLLFQQLMQKEENNI*TSPVRK
Trigger: TTTTCTAACTGGACTGGTTCAAATGTTGTTCTCTTC...TTTCTGCATCAGCTGCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp CTTGCCATCCCTTTAAAGAAGAGAACAACATTTGAACCAGTCCAGTTAGAAAAAGGAGTATTCAATAAGTaGGACTTCTGTGTCGTTAAA +
Preference number: 4 (lower is better)
Translates to: LAIPLKKRTTFEPVQLEKGVFNK*DFCVVK
Trigger: TTTAACGACACAGAAGTCCCACTTATTGAATACTCC...TTTTTCTAACTGGACTGGTTCAAATGTTGTTCTCTTCTTTAAAGGGATGGCAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp GACTACATGGGCCTGCATACACATCTAATAGTAGAGGATATTTCTTGGATTTATGGAGTATTCAATAAGTaGGACTTCTGTGTCGTTAAA +
Preference number: 4 (lower is better)
Translates to: DYMGLHTHLIVEDISWIYGVFNK*DFCVVK
Trigger: TTTAACGACACAGAAGTCCCACTTATTGAATACTCC...ATAAATCCAAGAAATATCCTCTACTATTAGATGTGTATGCAGGCCCATGTAGTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CCA 90 bp CTTGCCATCCCTTTAAAGAAGAGAACAACATTTGAACCAGTCCAGTTAGAAAAAAGTTCCATCTTCCACTaGATTCATCATAGTCACAAA +
Preference number: 4 (lower is better)
Translates to: LAIPLKKRTTFEPVQLEKSSIFH*IHHSHK
Trigger: TTTGTGACTATGATGAATCCAGTGGAAGATGGAACT...TTTTTCTAACTGGACTGGTTCAAATGTTGTTCTCTTCTTTAAAGGGATGGCAAG
37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp CAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAGCTGATGCAGAAAAGTTCCATCTTCCACTaGATTCATCATAGTCACAAA +
Preference number: 4 (lower is better)
Translates to: QSLHKNNSYLLFQQLMQKSSIFH*IHHSHK
Trigger: TTTGTGACTATGATGAATCCAGTGGAAGATGGAACT...TTTCTGCATCAGCTGCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp TATTTTCATCTTTTAACAGGGCAAGCTGATGTGTTCACATCTCAGTTTCAAGCTAGTTCCATCTTCCACTaGATTCATCATAGTCACAAA +
Preference number: 4 (lower is better)
Translates to: YFHLLTGQADVFTSQFQASSIFH*IHHSHK
Trigger: TTTGTGACTATGATGAATCCAGTGGAAGATGGAACT...AGCTTGAAACTGAGATGTGAACACATCAGCTTGCCCTGTTAAAAGATGAAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp TTCGTTCAAGCCAGAAAGTCAGGTTTGAATATAGATTCGTACTTGGTCATTTTCAGTATAGATAATCACTaGTTAGAGCTTCTATCCCGA +
Preference number: 4 (lower is better)
Translates to: FVQARKSGLNIDSYLVIFSIDNH*LELLSR
Trigger: TCGGGATAGAAGCTCTAACCAGTGATTATCTATACT...GAAAATGACCAAGTACGAATCTATATTCAAACCTGACTTTCTGGCTTGAACGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434918.6
ENST00000678566.1
CDS-3UTR CCA 90 bp TTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGAAAATTGTCTGGCTGCTTAGTATAGATAATCACTaGTTAGAGCTTCTATCCCGA +
Preference number: 4 (lower is better)
Translates to: LQFVCCPQIPFLKIVWLLSIDNH*LELLSR
Trigger: TCGGGATAGAAGCTCTAACCAGTGATTATCTATACT...AAGCAGCCAGACAATTTTCAAAAATGGGATTTGTGGACAACAAACGAATTGCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CCA 90 bp CAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAGCTGATGCAGAAAATGAAGTGGCTCATGTaGGTATATATATGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: QSLHKNNSYLLFQQLMQKMKWLM*VYICWC
Trigger: ACACCAACATATATATACCCACATGAGCCACTTCAT...TTTCTGCATCAGCTGCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR TCA 90 bp TACATGGGCCTGCATACACATCTAATAGTAGAGGATATTTCTTGGATTTATCAAAGATCATCATCATCTTaGCAGTGCAGTTTTGAGATA +
Preference number: 4 (lower is better)
Translates to: YMGLHTHLIVEDISWIYQRSSSS*QCSFEI
Trigger: TATCTCAAAACTGCACTGTCAAGATGATGATGATCT...TTGATAAATCCAAGAAATATCCTCTACTATTAGATGTGTATGCAGGCCCATGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
3UTR CAA 72 bp CAAGCCAGAAAGTCAGGTTTGAATATAGATTCGTACTaGGTCATTTTCTTAATCTGTAGGCCTCATTTTCTT +
Preference number: 4 (lower is better)
Translates to: QARKSGLNIDSY*VIFLICRPHFL
Trigger: AAGAAAATGAGGCCTACAGATTAAGAAAATGACCAAGTACGAATCTATATTCAAACCTGACTTTCTGGCTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434918.6
3UTR CAA 72 bp TCTAATAGCTTGTTCGTTCAAGCCAGAAAGTCAGGTTaGAATATAGATTCGTACTTGGTCATTTTCTTAATC +
Preference number: 4 (lower is better)
Translates to: SNSLFVQARKSG*NIDSYLVIFLI
Trigger: GATTAAGAAAATGACCAAGTACGAATCTATATTCAAACCTGACTTTCTGGCTTGAACGAACAAGCTATTAGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434918.6
ENST00000678566.1
CDS-3UTR GCA 90 bp AGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACTGCTGTGGTTTTACTTAGAATCTAAGAGAATAAACTaGCCATCAGGAGATATTGAA +
Preference number: 4 (lower is better)
Translates to: SFPYISLESFQLLWFYLESKRIN*PSGDIE
Trigger: TTCAATATCTCCTGATGGGCAGTTTATTCTCTTAGA...TTCTAAGTAAAACCACAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAAACT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CCA 90 bp TACATGGGCCTGCATACACATCTAATAGTAGAGGATATTTCTTGGATTTATCAATCTTTTCAACTGCTGTaGTTTTACTTAGAAGTCAGT +
Preference number: 4 (lower is better)
Translates to: YMGLHTHLIVEDISWIYQSFQLL*FYLEVS
Trigger: ACTGACTTCTAAGTAAAACCACAGCAGTTGAAAAGA...TTGATAAATCCAAGAAATATCCTCTACTATTAGATGTGTATGCAGGCCCATGTA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS GCA 90 bp AGGCAGAAGTCACCGCGGGCGGCGGAGACGCGCGTCCTGCACCGCTaGTCCGGGCGGTGGAGTCACTCGCCGCTGGCAAGTTTCGGCCCC +
Preference number: 5 (lower is better)
Translates to: RQKSPRAAETRVLHR*SGRWSHSPLASFGP
Trigger: GGGGCCGAAACTTGCCAGCGGCGAGTGACTCCACCGCCCGGAGCAGCGGTGCAGGACGCGCGTCTCCGCCGCCCGCGGTGACTTCTGCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360534.8
ENST00000434918.6
ENST00000676810.1
ENST00000678566.1
CDS GCA 90 bp AGGAGCGCAGGCAGAAGTCACCGCGGGCGGCGGAGACGCGCGTCCTaGACCGCTGCTCCGGGCGGTGGAGTCACTCGCCGCTGGCAAGTT +
Preference number: 5 (lower is better)
Translates to: RSAGRSHRGRRRRAS*TAAPGGGVTRRWQV
Trigger: AACTTGCCAGCGGCGAGTGACTCCACCGCCCGGAGCAGCGGTGCAGGACGCGCGTCTCCGCCGCCCGCGGTGACTTCTGCCTGCGCTCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360534.8
ENST00000434918.6
ENST00000676810.1
ENST00000678566.1
CDS CCA 90 bp CCGCGGGCGGCGGAGACGCGCGTCCTGCACCGCTGCTCCGGGCGGTaGAGTCACTCGCCGCTGGCAAGTTTCGGCCCCGAGTTAAACATT +
Preference number: 5 (lower is better)
Translates to: PRAAETRVLHRCSGR*SHSPLASFGPELNI
Trigger: AATGTTTAACTCGGGGCCGAAACTTGCCAGCGGCGAGTGACTCCACCGCCCGGAGCAGCGGTGCAGGACGCGCGTCTCCGCCGCCCGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360534.8
ENST00000676810.1
ENST00000678566.1
CDS CCA 90 bp GAGACCGCGGGCTGGGGGTGGGGGTGGCGTCTGGAGTGCGCCAGTTaGAGTTCTCTAAGGCGGGTGCCCTTGAACTTGTGCCTTCAGAGC +
Preference number: 5 (lower is better)
Translates to: ETAGWGWGWRLECAS*SSLRRVPLNLCLQS
Trigger: GCTCTGAAGGCACAAGTTCAAGGGCACCCGCCTTAGAGAACTCCAACTGGCGCACTCCAGACGCCACCCCCACCCCCAGCCCGCGGTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000461836.6
CDS CCA 90 bp AAGCGAGAGCTCTGGGACGTCCCTTCACCTGTCAGAGGGTGGCCTTaGGGCTTCCGCCTAAGGGGAGTCCCTGGTCCGGTTTCGCCAGCT +
Preference number: 5 (lower is better)
Translates to: KRELWDVPSPVRGWP*GFRLRGVPGPVSPA
Trigger: AGCTGGCGAAACCGGACCAGGGACTCCCCTTAGGCGGAAGCCCCAAGGCCACCCTCTGACAGGTGAAGGGACGTCCCAGAGCTCTCGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461836.6
CDS CCA 90 bp CAGGGTCCTAGCAGAAGCCAGGGTCCGAAAGCTAAGCGAGAGCTCTaGGACGTCCCTTCACCTGTCAGAGGGTGGCCTTGGGGCTTCCGC +
Preference number: 5 (lower is better)
Translates to: QGPSRSQGPKAKREL*DVPSPVRGWPWGFR
Trigger: GCGGAAGCCCCAAGGCCACCCTCTGACAGGTGAAGGGACGTCCCAGAGCTCTCGCTTAGCTTTCGGACCCTGGCTTCTGCTAGGACCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461836.6
CDS TCA 90 bp GAAGAACCTTCCACGGTGTCTTCATCGTCGGCGTCTCCTCGGAAGTaGGCGTTCAGAGAAGGAGCGCAGGCAGAAGTCACCGCGGGCGGC +
Preference number: 5 (lower is better)
Translates to: EEPSTVSSSSASPRK*AFREGAQAEVTAGG
Trigger: GCCGCCCGCGGTGACTTCTGCCTGCGCTCCTTCTCTGAACGCTCACTTCCGAGGAGACGCCGACGATGAAGACACCGTGGAAGGTTCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360534.8
ENST00000434918.6
ENST00000676768.1
ENST00000676810.1
ENST00000678566.1
CDS CCA 90 bp TTGGTTTCTCTACCCCTGCCCGGGTTCGGGCGTGCGTTCTGTGAGTaGCTCTCCGGGACATTCAAAGCTCGACGCCAGGGTCCTAGCAGA +
Preference number: 5 (lower is better)
Translates to: LVSLPLPGFGRAFCE*LSGTFKARRQGPSR
Trigger: TCTGCTAGGACCCTGGCGTCGAGCTTTGAATGTCCCGGAGAGCCACTCACAGAACGCACGCCCGAACCCGGGCAGGGGTAGAGAAACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461836.6
CDS-3UTR CAA 90 bp CGGGATACAGGCGCCACGGCTATTCCACACTTGAACACGCCACTTCCCGATCCCGGCCATTTGGGGAGTTaGGCGAAGAGGTCCCCACAG +
Preference number: 5 (lower is better)
Translates to: RDTGATAIPHLNTPLPDPGHLGS*AKRSPQ
Trigger: CTGTGGGGACCTCTTCGCCAAACTCCCCAAATGGCC...GGGATCGGGAAGTGGCGTGTTCAAGTGTGGAATAGCCGTGGCGCCTGTATCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676479.1
CDS GCA 90 bp GACTCTGCATGGCCTGGGTTACTCTCCATGACCCCAGGTGTACTCTaGACCCTGTGCATGCTCAGCAAGGCAGTTCACCCGTGGCGCAGA +
Preference number: 5 (lower is better)
Translates to: DSAWPGLLSMTPGVL*TLCMLSKAVHPWRR
Trigger: TCTGCGCCACGGGTGAACTGCCTTGCTGAGCATGCACAGGGTGCAGAGTACACCTGGGGTCATGGAGAGTAACCCAGGCCATGCAGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS TCA 90 bp CTCCCAGGTTCGCTGACAAATCCCTCAGGAGAGGAATGGGTGGGATaGGATGAAGCAGATCTGAGGGCTGCAGCACCCGTACACCCGCAC +
Preference number: 5 (lower is better)
Translates to: LPGSLTNPSGEEWVG*DEADLRAAAPVHPH
Trigger: GTGCGGGTGTACGGGTGCTGCAGCCCTCAGATCTGCTTCATCTCATCCCACCCATTCCTCTCCTGAGGGATTTGTCAGCGAACCTGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS GCA 90 bp AGCGCAGCAGCACCCAGCAGTCCCAGAAGAACCTTCCACGGTGTCTaGAAGCCGAGCAGATCAAGTCCAATTAGAGGGAAGCGTGTGGCC +
Preference number: 5 (lower is better)
Translates to: SAAAPSSPRRTFHGV*KPSRSSPIRGKRVA
Trigger: GGCCACACGCTTCCCTCTAATTGGACTTGATCTGCTCGGCTTGCAGACACCGTGGAAGGTTCTTCTGGGACTGCTGGGTGCTGCTGCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461836.6
ENST00000497461.5
CDS TCA 90 bp CAAATCCCTCAGGAGAGGAATGGGTGGGATGAGATGAAGCAGATCTaGGGGCTGCAGCACCCGTACACCCGCACAGTCGTAGCATGCAGG +
Preference number: 5 (lower is better)
Translates to: QIPQERNGWDEMKQI*GLQHPYTRTVVACR
Trigger: CCTGCATGCTACGACTGTGCGGGTGTACGGGTGCTGCAGCCCTCAGATCTGCTTCATCTCATCCCACCCATTCCTCTCCTGAGGGATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS TCA 90 bp GGTGATACCGGGCTTCCATGCTACCCTGCTGTAAGGCGCAGGTACTaGAACAGGACCGAACCCCTTCACTCAGCCGCAGAGCACTGCATT +
Preference number: 5 (lower is better)
Translates to: GDTGLPCYPAVRRRY*NRTEPLHSAAEHCI
Trigger: AATGCAGTGCTCTGCGGCTGAGTGAAGGGGTTCGGTCCTGTTTCAGTACCTGCGCCTTACAGCAGGGTAGCATGGAAGCCCGGTATCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS GCA 90 bp GAGTGCGCCAGTTGGAGTTCTCTAAGGCGGGTGCCCTTGAACTTGTaGCTTCAGAGCACATTAGCGTTGGTTTCTCTACCCCTGCCCGGG +
Preference number: 5 (lower is better)
Translates to: ECASWSSLRRVPLNL*LQSTLALVSLPLPG
Trigger: CCCGGGCAGGGGTAGAGAAACCAACGCTAATGTGCTCTGAAGGCACAAGTTCAAGGGCACCCGCCTTAGAGAACTCCAACTGGCGCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461836.6
CDS GCA 90 bp TGGCCTGGGTTACTCTCCATGACCCCAGGTGTACTCTGCACCCTGTaGATGCTCAGCAAGGCAGTTCACCCGTGGCGCAGACAGGAATTT +
Preference number: 5 (lower is better)
Translates to: WPGLLSMTPGVLCTL*MLSKAVHPWRRQEF
Trigger: AAATTCCTGTCTGCGCCACGGGTGAACTGCCTTGCTGAGCATGCACAGGGTGCAGAGTACACCTGGGGTCATGGAGAGTAACCCAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS-3UTR CAA 90 bp AGTCTGGCTGTGAACAGCTCTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGCTCGTGTTGGTATGCTaGGACTTGGGTTCCCAGCCA +
Preference number: 5 (lower is better)
Translates to: SLAVNSSSPRGADSSLLVLVLVC*DLGSQP
Trigger: TGGCTGGGAACCCAAGTCCAAGCATACCAACACGAG...CACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAGAGCTGTTCACAGCCAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp GGCACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTACCTGGGGGCCTGCGTaGCTGGCAGTTTCCCTTACA +
Preference number: 5 (lower is better)
Translates to: GTWGPALLAVSLTFLWSLTWGPA*LAVSLT
Trigger: TGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGT...AAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp GCAGTTGGCACTCTCCTGAGGCTAGAAACTTCCGGAGAGCCCCGCTGCCAGCAAGAACCCGTACAGTCTTaGGGTACTGCAGTGACTCAT +
Preference number: 5 (lower is better)
Translates to: AVGTLLRLETSGEPRCQQEPVQS*GTAVTH
Trigger: ATGAGTCACTGCAGTACCCAAAGACTGTACGGGTTC...TTGCTGGCAGCGGGGCTCTCCGGAAGTTTCTAGCCTCAGGAGAGTGCCAACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416189.6
CDS-3UTR CAA 90 bp CTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGCTCGTGTTGGTATGCTaGGACTTGGGTTCCCAGCCA +
Preference number: 5 (lower is better)
Translates to: LLRGELTVACSCWYAWTWLVLVC*DLGSQP
Trigger: TGGCTGGGAACCCAAGTCCAAGCATACCAACACGAG...CCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CGGGATACAGGCGCCACGGCTATTCCACACTTGAACACGCCACTTCCCGATCCCGCTTTCCCATCACCCTaGCTGTGTTTTTGTAGCACC +
Preference number: 5 (lower is better)
Translates to: RDTGATAIPHLNTPLPDPAFPSP*LCFCST
Trigger: GGTGCTACAAAAACACAGCAAGGGTGATGGGAAAGC...GGGATCGGGAAGTGGCGTGTTCAAGTGTGGAATAGCCGTGGCGCCTGTATCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS TCA 90 bp TTTGGTGGGGTAGAAGAGGGACCACCCCTGCAGTCCAGGCCTTCCTaGGAGCCTGGACAACTTACCCAGGTTAGACATATGAGCCAGCAA +
Preference number: 5 (lower is better)
Translates to: FGGVEEGPPLQSRPS*EPGQLTQVRHMSQQ
Trigger: TTGCTGGCTCATATGTCTAACCTGGGTAAGTTGTCCAGGCTCTCAGGAAGGCCTGGACTGCAGGGGTGGTCCCTCTTCTACCCCACCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS TCA 90 bp AAAGGTTTATGGTCCTGGACTCTGCATGGCCTGGGTTACTCTCCATaGCCCCAGGTGTACTCTGCACCCTGTGCATGCTCAGCAAGGCAG +
Preference number: 5 (lower is better)
Translates to: KGLWSWTLHGLGYSP*PQVYSAPCACSARQ
Trigger: CTGCCTTGCTGAGCATGCACAGGGTGCAGAGTACACCTGGGGTCATGGAGAGTAACCCAGGCCATGCAGAGTCCAGGACCATAAACCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS GCA 90 bp TCATCCACGATGTCTTCTTGGAAACCTCCTTCTCCCACACCACTCTaGCAGGTCTCATTGCACTCATCACAAACCGCCAGGCTGCAGGGG +
Preference number: 5 (lower is better)
Translates to: SSTMSSWKPPSPTPL*QVSLHSSQTARLQG
Trigger: CCCCTGCAGCCTGGCGGTTTGTGATGAGTGCAATGAGACCTGGCAGAGTGGTGTGGGAGAAGGAGGTTTCCAAGAAGACATCGTGGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS GCA 90 bp ATGCTCTCACACAATCCACTTGCCCTCTCCTTCACAGGCTGGACCTaGCCCTCTCCTTGCTTGACTGCAAGCTCTTTTACAGGGTGTCCC +
Preference number: 5 (lower is better)
Translates to: MLSHNPLALSFTGWT*PSPCLTASSFTGCP
Trigger: GGGACACCCTGTAAAAGAGCTTGCAGTCAAGCAAGGAGAGGGGCAGGTCCAGCCTGTGAAGGAGAGGGCAAGTGGATTGTGTGAGAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS CCA 90 bp GGCAGCAGGGAGACTCACCCTGGTTCAAGTTCAGGCCTTAGTTGTTaGAAACGCAGCCTGGCTGCCCTTCTCACTTATCAGAGAAGCAGG +
Preference number: 5 (lower is better)
Translates to: GSRETHPGSSSGLSC*KRSLAALLTYQRSR
Trigger: CCTGCTTCTCTGATAAGTGAGAAGGGCAGCCAGGCTGCGTTTCCAACAACTAAGGCCTGAACTTGAACCAGGGTGAGTCTCCCTGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS-3UTR CAA 90 bp CGGGATACAGGCGCCACGGCTATTCCACACTTGAACACGCCACTTCCCGATCCCGTGACCCACTGTGTGTaGTTTGGAATCCTCTCTTCT +
Preference number: 5 (lower is better)
Translates to: RDTGATAIPHLNTPLPDPVTHCV*FGILSS
Trigger: AGAAGAGAGGATTCCAAACAACACACAGTGGGTCAC...GGGATCGGGAAGTGGCGTGTTCAAGTGTGGAATAGCCGTGGCGCCTGTATCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCTCACAGCTCCTGCCTTaGGATATGGAACCCGTACAG +
Preference number: 5 (lower is better)
Translates to: LTVACSCWYAWTWVPSHASQLLP*DMEPVQ
Trigger: CTGTACGGGTTCCATATCCAAAGGCAGGAGCTGTGA...GGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp GAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATCCGATCCCAGGACCATaGAGGTTACGTACCCTCCAT +
Preference number: 5 (lower is better)
Translates to: ELTVACSCWYAWTWVPSHPIPGP*RLRTLH
Trigger: ATGGAGGGTACGTAACCTCAATGGTCCTGGGATCGG...ATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCACGGCTATTCCACACTaGAACACGCCACTTCCCGAT +
Preference number: 5 (lower is better)
Translates to: LTVACSCWYAWTWVPSHATAIPH*NTPLPD
Trigger: ATCGGGAAGTGGCGTGTTCAAGTGTGGAATAGCCGT...GGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp GTCATAGTACTCCCACCGGGATACAGGCGCCACGGCTATTCCACACTTGAACACTTGGTATGCTTGGACTaGGGTTCCCAGCCATGCCCT +
Preference number: 5 (lower is better)
Translates to: VIVLPPGYRRHGYSTLEHLVCLD*GSQPCP
Trigger: AGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAA...GTGTTCAAGTGTGGAATAGCCGTGGCGCCTGTATCCCGGTGGGAGTACTATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp GAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATTTGGTATGCTTGGACTaGGGTTCCCAGCCATGCCCT +
Preference number: 5 (lower is better)
Translates to: ELTVACSCWYAWTWVPSHLVCLD*GSQPCP
Trigger: AGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAA...ATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp GGCACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTCTCGTGTTGGTATGCTaGGACTTGGGTTCCCAGCCA +
Preference number: 5 (lower is better)
Translates to: GTWGPALLAVSLTFLWSLLVLVC*DLGSQP
Trigger: TGGCTGGGAACCCAAGTCCAAGCATACCAACACGAG...AAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TGTTTTTGTAGCACCTATAGCCATAACTGGCACCTGGGGGCCTGCGTTGCTGGCCTCGTGTTGGTATGCTaGGACTTGGGTTCCCAGCCA +
Preference number: 5 (lower is better)
Translates to: CFCSTYSHNWHLGACVAGLVLVC*DLGSQP
Trigger: TGGCTGGGAACCCAAGTCCAAGCATACCAACACGAG...GCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGTGCTACAAAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp GAGGGGCAGACCAGGACCGGAACATCTCAGCTGATAATACTTCGCCTCTTTACTACCTGGGGGCCTGCGTaGCTGGCAGTTTCCCTTACA +
Preference number: 5 (lower is better)
Translates to: EGQTRTGTSQLIILRLFTTWGPA*LAVSLT
Trigger: TGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGT...AGTAAAGAGGCGAAGTATTATCAGCTGAGATGTTCCGGTCCTGGTCTGCCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp GCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCCGGTTTCGCCAGCTTTaGGGCCATTTGGGGAGTTTG +
Preference number: 5 (lower is better)
Translates to: ARVGMLGLGFPAMPCYLLRFRQL*GHLGSL
Trigger: CAAACTCCCCAAATGGCCCAAAAGCTGGCGAAACCG...GAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676479.1
CDS CCA 90 bp CCCTGCCCATTTTCAGATCAAAGGTTTATGGTCCTGGACTCTGCATaGCCTGGGTTACTCTCCATGACCCCAGGTGTACTCTGCACCCTG +
Preference number: 5 (lower is better)
Translates to: PCPFSDQRFMVLDSA*PGLLSMTPGVLCTL
Trigger: CAGGGTGCAGAGTACACCTGGGGTCATGGAGAGTAACCCAGGCCATGCAGAGTCCAGGACCATAAACCTTTGATCTGAAAATGGGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS CCA 90 bp TCCCAAATGCTCTCACACAATCCACTTGCCCTCTCCTTCACAGGCTaGACCTGCCCCTCTCCTTGCTTGACTGCAAGCTCTTTTACAGGG +
Preference number: 5 (lower is better)
Translates to: SQMLSHNPLALSFTG*TCPSPCLTASSFTG
Trigger: CCCTGTAAAAGAGCTTGCAGTCAAGCAAGGAGAGGGGCAGGTCCAGCCTGTGAAGGAGAGGGCAAGTGGATTGTGTGAGAGCATTTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS-3UTR CAA 90 bp GCACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTCCGATCCCAGGACCATaGAGGTTACGTACCCTCCAT +
Preference number: 5 (lower is better)
Translates to: APGGLRCWQFPLHFFGVFPIPGP*RLRTLH
Trigger: ATGGAGGGTACGTAACCTCAATGGTCCTGGGATCGG...AAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp AGCTCTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACGCTTTCCCATCACCCTaGCTGTGTTTTTGTAGCACC +
Preference number: 5 (lower is better)
Translates to: SSSPRGADSSLLVLVCLDAFPSP*LCFCST
Trigger: GGTGCTACAAAAACACAGCAAGGGTGATGGGAAAGC...GTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTGTAGCATCATTGCCTTaGTTCAGCAGAACCACGGGC +
Preference number: 5 (lower is better)
Translates to: PARVGMLGLGFPAMPCYLVASLP*FSRTTG
Trigger: GCCCGTGGTTCTGCTGAACAAAGGCAATGATGCTAC...AAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676624.1
ENST00000676810.1
CDS TCA 90 bp TATTGTGTCATCCAGGAGCAGAGAGAGCAGGGATGGGGTATGTCATaGGCTGGGTGTGATGAGCCCCAGAGCCATTCAACAGATGTTGGG +
Preference number: 5 (lower is better)
Translates to: YCVIQEQREQGWGMS*AGCDEPQSHSTDVG
Trigger: CCCAACATCTGTTGAATGGCTCTGGGGCTCATCACACCCAGCTCATGACATACCCCATCCCTGCTCTCTCTGCTCCTGGATGACACAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS TCA 90 bp TCCCCATTTTACAGCTGGGAACACTTAATGTGCGAATGTGCCTGGTaGTACCGGGCTTCCATGCTACCCTGCTGTAAGGCGCAGGTACTG +
Preference number: 5 (lower is better)
Translates to: SPFYSWEHLMCECAW*YRASMLPCCKAQVL
Trigger: CAGTACCTGCGCCTTACAGCAGGGTAGCATGGAAGCCCGGTATCACCAGGCACATTCGCACATTAAGTGTTCCCAGCTGTAAAATGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS CCA 90 bp CTCACCCTGGTTCAAGTTCAGGCCTTAGTTGTTGGAAACGCAGCCTaGCTGCCCTTCTCACTTATCAGAGAAGCAGGGCTTCCACCCATT +
Preference number: 5 (lower is better)
Translates to: LTLVQVQALVVGNAA*LPFSLIREAGLPPI
Trigger: AATGGGTGGAAGCCCTGCTTCTCTGATAAGTGAGAAGGGCAGCCAGGCTGCGTTTCCAACAACTAAGGCCTGAACTTGAACCAGGGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS-3UTR CAA 90 bp CAGAGACAATGCTCTGGCTTTGCCGTGGCATCCACACTAGCACATGGGGGCTGTGACAGTGTCTGCTTTTaGACTACATGGGCCTGCATA +
Preference number: 5 (lower is better)
Translates to: QRQCSGFAVASTLAHGGCDSVCF*TTWACI
Trigger: TATGCAGGCCCATGTAGTCAAAAAGCAGACACTGTC...ACAGCCCCCATGTGCTAGTGTGGATGCCACGGCAAAGCCAGAGCATTGTCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494507.2
CDS-3UTR CAA 90 bp GGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCTCCCTAATCACGGCTATTCCACACTaGAACACGCCACTTCCCGAT +
Preference number: 5 (lower is better)
Translates to: GMLGLGFPAMPCYLLSLITAIPH*NTPLPD
Trigger: ATCGGGAAGTGGCGTGTTCAAGTGTGGAATAGCCGT...GATTAGGGAGAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TTCTCAGAAAACTGTGCCAGTCTGGCTGTGAACAGCTCTTCTCCGAGGGGAGCTACGGCTATTCCACACTaGAACACGCCACTTCCCGAT +
Preference number: 5 (lower is better)
Translates to: FSENCASLAVNSSSPRGATAIPH*NTPLPD
Trigger: ATCGGGAAGTGGCGTGTTCAAGTGTGGAATAGCCGT...AGCTCCCCTCGGAGAAGAGCTGTTCACAGCCAGACTGGCACAGTTTTCTGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp GCACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTACGGCTATTCCACACTaGAACACGCCACTTCCCGAT +
Preference number: 5 (lower is better)
Translates to: APGGLRCWQFPLHFFGVFTAIPH*NTPLPD
Trigger: ATCGGGAAGTGGCGTGTTCAAGTGTGGAATAGCCGT...AAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp GGCACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTGGTTGTCTTCTGGAGTaGGGAGACCCATGTAACGTT +
Preference number: 5 (lower is better)
Translates to: GTWGPALLAVSLTFLWSLGCLLE*GDPCNV
Trigger: AACGTTACATGGGTCTCCCAACTCCAGAAGACAACC...AAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp ATTCCACACTTGAACACGCCACTTCCCGATCCCAGGACCATTGAGGTTACGTACTTGGTATGCTTGGACTaGGGTTCCCAGCCATGCCCT +
Preference number: 5 (lower is better)
Translates to: IPHLNTPLPDPRTIEVTYLVCLD*GSQPCP
Trigger: AGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAA...GTACGTAACCTCAATGGTCCTGGGATCGGGAAGTGGCGTGTTCAAGTGTGGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TTCTCAGAAAACTGTGCCAGTCTGGCTGTGAACAGCTCTTCTCCGAGGGGAGCTAGTAGCCTGCTCGTGTaGGTATGCTTGGACTTGGGT +
Preference number: 5 (lower is better)
Translates to: FSENCASLAVNSSSPRGASSLLV*VCLDLG
Trigger: ACCCAAGTCCAAGCATACCAACACGAGCAGGCTACT...AGCTCCCCTCGGAGAAGAGCTGTTCACAGCCAGACTGGCACAGTTTTCTGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CGGGATACAGGCGCCACGGCTATTCCACACTTGAACACGCCACTTCCCGATCCCGCAGTATCTAATAGCTaGTTCGTTCAAGCCAGAAAG +
Preference number: 5 (lower is better)
Translates to: RDTGATAIPHLNTPLPDPAVSNS*FVQARK
Trigger: CTTTCTGGCTTGAACGAACAAGCTATTAGATACTGC...GGGATCGGGAAGTGGCGTGTTCAAGTGTGGAATAGCCGTGGCGCCTGTATCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434918.6
ENST00000678566.1
CDS GCA 90 bp TCTTCCCTGCCCATTTTCAGATCAAAGGTTTATGGTCCTGGACTCTaGATGGCCTGGGTTACTCTCCATGACCCCAGGTGTACTCTGCAC +
Preference number: 5 (lower is better)
Translates to: SSLPIFRSKVYGPGL*MAWVTLHDPRCTLH
Trigger: GTGCAGAGTACACCTGGGGTCATGGAGAGTAACCCAGGCCATGCAGAGTCCAGGACCATAAACCTTTGATCTGAAAATGGGCAGGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS CCA 90 bp CCCATTTTCAGATCAAAGGTTTATGGTCCTGGACTCTGCATGGCCTaGGTTACTCTCCATGACCCCAGGTGTACTCTGCACCCTGTGCAT +
Preference number: 5 (lower is better)
Translates to: PIFRSKVYGPGLCMA*VTLHDPRCTLHPVH
Trigger: ATGCACAGGGTGCAGAGTACACCTGGGGTCATGGAGAGTAACCCAGGCCATGCAGAGTCCAGGACCATAAACCTTTGATCTGAAAATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS CCA 90 bp TCCTTAGGTCTTGGCCTAAATGTCCCCTCATCCACGATGTCTTCTTaGAAACCTCCTTCTCCCACACCACTCTGCCAGGTCTCATTGCAC +
Preference number: 5 (lower is better)
Translates to: SLGLGLNVPSSTMSS*KPPSPTPLCQVSLH
Trigger: GTGCAATGAGACCTGGCAGAGTGGTGTGGGAGAAGGAGGTTTCCAAGAAGACATCGTGGATGAGGGGACATTTAGGCCAAGACCTAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS CCA 90 bp CCCCAGTTGCCCCCTCTTTGTTCAGTCTTGCTCTTTAGCCTGAAGTaGCTGCCAAGCTCTAACTTCCTTAGGTCTTGGCCTAAATGTCCC +
Preference number: 5 (lower is better)
Translates to: PQLPPLCSVLLFSLK*LPSSNFLRSWPKCP
Trigger: GGGACATTTAGGCCAAGACCTAAGGAAGTTAGAGCTTGGCAGCCACTTCAGGCTAAAGAGCAAGACTGAACAAAGAGGGGGCAACTGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS-3UTR CAA 90 bp GCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCGTGACCCACTGTGTGTaGTTTGGAATCCTCTCTTCT +
Preference number: 5 (lower is better)
Translates to: ARVGMLGLGFPAMPCYLLVTHCV*FGILSS
Trigger: AGAAGAGAGGATTCCAAACAACACACAGTGGGTCAC...GAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp GTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCTCCCTAGAACCCGTACAGTCTTaGGGTACTGCAGTGACTCAT +
Preference number: 5 (lower is better)
Translates to: VGMLGLGFPAMPCYLLSLEPVQS*GTAVTH
Trigger: ATGAGTCACTGCAGTACCCAAAGACTGTACGGGTTC...TAGGGAGAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp ACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCTCACAGCTCCTGCCTTaGGATATGGAACCCGTACAG +
Preference number: 5 (lower is better)
Translates to: TWGPALLAVSLTFLWSLFSQLLP*DMEPVQ
Trigger: CTGTACGGGTTCCATATCCAAAGGCAGGAGCTGTGA...GAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp GAGGGGCAGACCAGGACCGGAACATCTCAGCTGATAATACTTCGCCTCTTTACTTCACAGCTCCTGCCTTaGGATATGGAACCCGTACAG +
Preference number: 5 (lower is better)
Translates to: EGQTRTGTSQLIILRLFTSQLLP*DMEPVQ
Trigger: CTGTACGGGTTCCATATCCAAAGGCAGGAGCTGTGA...AGTAAAGAGGCGAAGTATTATCAGCTGAGATGTTCCGGTCCTGGTCTGCCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCAGCAGGAGCAGTGATTaGTATGGAAGTTGCATTGGT +
Preference number: 5 (lower is better)
Translates to: LTVACSCWYAWTWVPSHASRSSD*YGSCIG
Trigger: ACCAATGCAACTTCCATACAAATCACTGCTCCTGCT...GGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp GTCATAGTACTCCCACCGGGATACAGGCGCCACGGCTATTCCACACTTGAACACGACAGTGTCTGCTTTTaGACTACATGGGCCTGCATA +
Preference number: 5 (lower is better)
Translates to: VIVLPPGYRRHGYSTLEHDSVCF*TTWACI
Trigger: TATGCAGGCCCATGTAGTCAAAAAGCAGACACTGTC...GTGTTCAAGTGTGGAATAGCCGTGGCGCCTGTATCCCGGTGGGAGTACTATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACCCGATCCCAGGACCATaGAGGTTACGTACCCTCCAT +
Preference number: 5 (lower is better)
Translates to: WGPALLAVSLTFLWSLFNPIPGP*RLRTLH
Trigger: ATGGAGGGTACGTAACCTCAATGGTCCTGGGATCGG...GTTGAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp GGAGACCCATGTAACGTTCTGTGTACACTGAGTCATAGTACTCCCACCGGGATACCGATCCCAGGACCATaGAGGTTACGTACCCTCCAT +
Preference number: 5 (lower is better)
Translates to: GDPCNVLCTLSHSTPTGIPIPGP*RLRTLH
Trigger: ATGGAGGGTACGTAACCTCAATGGTCCTGGGATCGG...TATCCCGGTGGGAGTACTATGACTCAGTGTACACAGAACGTTACATGGGTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp GTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCTCCCTAGGTTGTCTTCTGGAGTaGGGAGACCCATGTAACGTT +
Preference number: 5 (lower is better)
Translates to: VGMLGLGFPAMPCYLLSLGCLLE*GDPCNV
Trigger: AACGTTACATGGGTCTCCCAACTCCAGAAGACAACC...TAGGGAGAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACTTGGTATGCTTGGACTaGGGTTCCCAGCCATGCCCT +
Preference number: 5 (lower is better)
Translates to: WGPALLAVSLTFLWSLFNLVCLD*GSQPCP
Trigger: AGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAA...GTTGAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TTCTCAGAAAACTGTGCCAGTCTGGCTGTGAACAGCTCTTCTCCGAGGGGAGCTGCTTTCCCATCACCCTaGCTGTGTTTTTGTAGCACC +
Preference number: 5 (lower is better)
Translates to: FSENCASLAVNSSSPRGAAFPSP*LCFCST
Trigger: GGTGCTACAAAAACACAGCAAGGGTGATGGGAAAGC...AGCTCCCCTCGGAGAAGAGCTGTTCACAGCCAGACTGGCACAGTTTTCTGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TTTGTAGCACCTATAGCCATAACTGGCACCTGGGGGCCTGCGTTGCTGGCAGTTTCAGCTGTAGCATCATaGCCTTTGTTCAGCAGAACC +
Preference number: 5 (lower is better)
Translates to: FVAPIAITGTWGPALLAVSAVAS*PLFSRT
Trigger: GGTTCTGCTGAACAAAGGCAATGATGCTACAGCTGA...AACTGCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGTGCTACAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676624.1
ENST00000676810.1
CDS TCA 90 bp CCCAGAGCTTTTCCAGGGCACGTTGTTCTGTCCTGCAGAAGTCTCTaGTCCTCTTTTGCAGGTGCTGAGAGAACTCACTGTGAATTTGGC +
Preference number: 5 (lower is better)
Translates to: PRAFPGHVVLSCRSL*SSFAGAERTHCEFG
Trigger: GCCAAATTCACAGTGAGTTCTCTCAGCACCTGCAAAAGAGGATCAGAGACTTCTGCAGGACAGAACAACGTGCCCTGGAAAAGCTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677015.1
ENST00000677212.1
ENST00000678522.1
CDS CCA 90 bp CCTCCTGTGGATTTCACTTGCTGCAGGCTCTGTGGTGAAGGGATATaGCCTAACAGGAAAACTAATGAGGGTAACATGGGCAGAGGAAGG +
Preference number: 5 (lower is better)
Translates to: PPVDFTCCRLCGEGI*PNRKTNEGNMGRGR
Trigger: CCTTCCTCTGCCCATGTTACCCTCATTAGTTTTCCTGTTAGGCCATATCCCTTCACCACAGAGCCTGCAGCAAGTGAAATCCACAGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS-3UTR CAA 90 bp GTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCTCCCTAGTGACCCACTGTGTGTaGTTTGGAATCCTCTCTTCT +
Preference number: 5 (lower is better)
Translates to: VGMLGLGFPAMPCYLLSLVTHCV*FGILSS
Trigger: AGAAGAGAGGATTCCAAACAACACACAGTGGGTCAC...TAGGGAGAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp GCACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTGTGACCCACTGTGTGTaGTTTGGAATCCTCTCTTCT +
Preference number: 5 (lower is better)
Translates to: APGGLRCWQFPLHFFGVFVTHCV*FGILSS
Trigger: AGAAGAGAGGATTCCAAACAACACACAGTGGGTCAC...AAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CAAGTAGTGATCCCACGGAGCACAGCCCACAGCCTTCCTGATGTACTTAATGCAGAACCCGTACAGTCTTaGGGTACTGCAGTGACTCAT +
Preference number: 5 (lower is better)
Translates to: QVVIPRSTAHSLPDVLNAEPVQS*GTAVTH
Trigger: ATGAGTCACTGCAGTACCCAAAGACTGTACGGGTTC...TGCATTAAGTACATCAGGAAGGCTGTGGGCTGTGCTCCGTGGGATCACTACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434918.6
ENST00000678566.1
CDS-3UTR CAA 90 bp GAGGGGCAGACCAGGACCGGAACATCTCAGCTGATAATACTTCGCCTCTTTACTGAACCCGTACAGTCTTaGGGTACTGCAGTGACTCAT +
Preference number: 5 (lower is better)
Translates to: EGQTRTGTSQLIILRLFTEPVQS*GTAVTH
Trigger: ATGAGTCACTGCAGTACCCAAAGACTGTACGGGTTC...AGTAAAGAGGCGAAGTATTATCAGCTGAGATGTTCCGGTCCTGGTCTGCCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CTCTCAGCCCTTTATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGACCAGGAACCCGTACAGTCTTaGGGTACTGCAGTGACTCAT +
Preference number: 5 (lower is better)
Translates to: LSALYHSRCCVEYRGADQEPVQS*GTAVTH
Trigger: ATGAGTCACTGCAGTACCCAAAGACTGTACGGGTTC...CTGGTCTGCCCCTCTATACTCTACACAGCAGCGTGAATGATAAAGGGCTGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp ACACAAGTAGTGATCCCACGGAGCACAGCCCACAGCCTTCCTGATGTACTTAATTCACAGCTCCTGCCTTaGGATATGGAACCCGTACAG +
Preference number: 5 (lower is better)
Translates to: TQVVIPRSTAHSLPDVLNSQLLP*DMEPVQ
Trigger: CTGTACGGGTTCCATATCCAAAGGCAGGAGCTGTGA...ATTAAGTACATCAGGAAGGCTGTGGGCTGTGCTCCGTGGGATCACTACTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434918.6
ENST00000678566.1
CDS-3UTR CAA 90 bp GCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCCAAAGAACTTTACAGTaGGATTCACAGCTCCTGCCT +
Preference number: 5 (lower is better)
Translates to: ARVGMLGLGFPAMPCYLLQRTLQ*DSQLLP
Trigger: AGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTTG...GAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp GTCATAGTACTCCCACCGGGATACAGGCGCCACGGCTATTCCACACTTGAACACCAAAGAACTTTACAGTaGGATTCACAGCTCCTGCCT +
Preference number: 5 (lower is better)
Translates to: VIVLPPGYRRHGYSTLEHQRTLQ*DSQLLP
Trigger: AGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTTG...GTGTTCAAGTGTGGAATAGCCGTGGCGCCTGTATCCCGGTGGGAGTACTATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp ACACGCCACTTCCCGATCCCAGGACCATTGAGGTTACGTACCCTCCATATGACCCAAAGAACTTTACAGTaGGATTCACAGCTCCTGCCT +
Preference number: 5 (lower is better)
Translates to: TRHFPIPGPLRLRTLHMTQRTLQ*DSQLLP
Trigger: AGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTTG...GGTCATATGGAGGGTACGTAACCTCAATGGTCCTGGGATCGGGAAGTGGCGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp GGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCTCCCTAATCCATGATCTTATCTCCTaGGTAACCACTTCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: GMLGLGFPAMPCYLLSLIHDLIS*VTTSSA
Trigger: GGCAGAGGAAGTGGTTACCAAGGAGATAAGATCATG...GATTAGGGAGAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TTCTCAGAAAACTGTGCCAGTCTGGCTGTGAACAGCTCTTCTCCGAGGGGAGCTCATGATCTTATCTCCTaGGTAACCACTTCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: FSENCASLAVNSSSPRGAHDLIS*VTTSSA
Trigger: GGCAGAGGAAGTGGTTACCAAGGAGATAAGATCATG...AGCTCCCCTCGGAGAAGAGCTGTTCACAGCCAGACTGGCACAGTTTTCTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp ACACGCCACTTCCCGATCCCAGGACCATTGAGGTTACGTACCCTCCATATGACCATGACCAGCCCCAAATaGCAATTCGTTTGTTGTCCA +
Preference number: 5 (lower is better)
Translates to: TRHFPIPGPLRLRTLHMTMTSPK*QFVCCP
Trigger: TGGACAACAAACGAATTGCAATTTGGGGCTGGTCAT...GGTCATATGGAGGGTACGTAACCTCAATGGTCCTGGGATCGGGAAGTGGCGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp GGCACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTATGACCAGCCCCAAATaGCAATTCGTTTGTTGTCCA +
Preference number: 5 (lower is better)
Translates to: GTWGPALLAVSLTFLWSLMTSPK*QFVCCP
Trigger: TGGACAACAAACGAATTGCAATTTGGGGCTGGTCAT...AAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp GGAGACCCATGTAACGTTCTGTGTACACTGAGTCATAGTACTCCCACCGGGATAACGGCTATTCCACACTaGAACACGCCACTTCCCGAT +
Preference number: 5 (lower is better)
Translates to: GDPCNVLCTLSHSTPTGITAIPH*NTPLPD
Trigger: ATCGGGAAGTGGCGTGTTCAAGTGTGGAATAGCCGT...TATCCCGGTGGGAGTACTATGACTCAGTGTACACAGAACGTTACATGGGTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp ACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCGGTTGTCTTCTGGAGTaGGGAGACCCATGTAACGTT +
Preference number: 5 (lower is better)
Translates to: TWGPALLAVSLTFLWSLFGCLLE*GDPCNV
Trigger: AACGTTACATGGGTCTCCCAACTCCAGAAGACAACC...GAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp GAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATCATCAGTATACCACATaGCCTGGAAATCCACTCCAA +
Preference number: 5 (lower is better)
Translates to: ELTVACSCWYAWTWVPSHHQYTT*PGNPLQ
Trigger: TTGGAGTGGATTTCCAGGCAATGTGGTATACTGATG...ATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACAGTAGCCTGCTCGTGTaGGTATGCTTGGACTTGGGT +
Preference number: 5 (lower is better)
Translates to: WGPALLAVSLTFLWSLFNSSLLV*VCLDLG
Trigger: ACCCAAGTCCAAGCATACCAACACGAGCAGGCTACT...GTTGAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp AGTCTGGCTGTGAACAGCTCTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGTTCCCTTACATTTCTTaGGAGTCTTTTCAACTGCTG +
Preference number: 5 (lower is better)
Translates to: SLAVNSSSPRGADSSLLVFPYIS*ESFQLL
Trigger: CAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAA...CACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAGAGCTGTTCACAGCCAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CCTCCATATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTACCTGGGGGCCTGCGTaGCTGGCAGTTTCCCTTACA +
Preference number: 5 (lower is better)
Translates to: PPYDQPQIAIRLLSTNPITWGPA*LAVSLT
Trigger: TGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGT...AATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATATGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS CCA 90 bp ATATTGGTTGGGCATATGCTATGTCGCAGGCACCCTACTACACACTaGAGATACGATTGCAGGATTGGCCTCTACTGCGTAGAACCTGTC +
Preference number: 5 (lower is better)
Translates to: ILVGHMLCRRHPTTH*RYDCRIGLYCVEPV
Trigger: GACAGGTTCTACGCAGTAGAGGCCAATCCTGCAATCGTATCTCCAGTGTGTAGTAGGGTGCCTGCGACATAGCATATGCCCAACCAATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS CCA 90 bp CGCAGACACCTAATCACACAACAGACATTTACTGGGCACTCGGGATaGATTAGGTGCTGGATAAAGCCCTTTAAGCCCCTCACAGCTTCA +
Preference number: 5 (lower is better)
Translates to: RRHLITQQTFTGHSG*IRCWIKPFKPLTAS
Trigger: TGAAGCTGTGAGGGGCTTAAAGGGCTTTATCCAGCACCTAATCCATCCCGAGTGCCCAGTAAATGTCTGTTGTGTGATTAGGTGTCTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS CCA 90 bp CCTAGCAGAATGCCTGACTCAACACAGGCACTAATTATATGTCCGTaGAATGCAGCACAGAAGAAAGCAAAGCCCTCTCCTCACCTGTGG +
Preference number: 5 (lower is better)
Translates to: PSRMPDSTQALIICP*NAAQKKAKPSPHLW
Trigger: CCACAGGTGAGGAGAGGGCTTTGCTTTCTTCTGTGCTGCATTCCACGGACATATAATTAGTGCCTGTGTTGAGTCAGGCATTCTGCTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS-3UTR CAA 90 bp TATAGAGGGGCAGACCAGGACCGGAACATCTCAGCTGATAATACTTCGCCTCTTGAACCCGTACAGTCTTaGGGTACTGCAGTGACTCAT +
Preference number: 5 (lower is better)
Translates to: YRGADQDRNISADNTSPLEPVQS*GTAVTH
Trigger: ATGAGTCACTGCAGTACCCAAAGACTGTACGGGTTC...AAGAGGCGAAGTATTATCAGCTGAGATGTTCCGGTCCTGGTCTGCCCCTCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp GTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCTCCCTACAAAGAACTTTACAGTaGGATTCACAGCTCCTGCCT +
Preference number: 5 (lower is better)
Translates to: VGMLGLGFPAMPCYLLSLQRTLQ*DSQLLP
Trigger: AGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTTG...TAGGGAGAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp AGCTCTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACAAATTCTTTCTTGTGTaGCCCATGTCACATCACACA +
Preference number: 5 (lower is better)
Translates to: SSSPRGADSSLLVLVCLDKFFLV*PMSHHT
Trigger: TGTGTGATGTGACATGGGCAACACAAGAAAGAATTT...GTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp GACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTAAATTCTTTCTTGTGTaGCCCATGTCACATCACACA +
Preference number: 5 (lower is better)
Translates to: DSSLLVLVCLDLGSQPCPKFFLV*PMSHHT
Trigger: TGTGTGATGTGACATGGGCAACACAAGAAAGAATTT...AGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCAAAGAAATTCTTTCTaGTGTTGCCCATGTCACATC +
Preference number: 5 (lower is better)
Translates to: LTVACSCWYAWTWVPSHAQRNSF*CCPCHI
Trigger: GATGTGACATGGGCAACACAAGAAAGAATTTCTTTG...GGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TTCTCAGAAAACTGTGCCAGTCTGGCTGTGAACAGCTCTTCTCCGAGGGGAGCTTTATCCAAAGCTGAATaGTCTTCCAGGACTCTCAGC +
Preference number: 5 (lower is better)
Translates to: FSENCASLAVNSSSPRGALSKAE*SSRTLS
Trigger: GCTGAGAGTCCTGGAAGACAATTCAGCTTTGGATAA...AGCTCCCCTCGGAGAAGAGCTGTTCACAGCCAGACTGGCACAGTTTTCTGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp GGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCTCCCTAATCTTATCCAAAGCTGAATaGTCTTCCAGGACTCTCAGC +
Preference number: 5 (lower is better)
Translates to: GMLGLGFPAMPCYLLSLILSKAE*SSRTLS
Trigger: GCTGAGAGTCCTGGAAGACAATTCAGCTTTGGATAA...GATTAGGGAGAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGACCAGGACCGGAACATCGACAGTGTCTGCTTTTaGACTACATGGGCCTGCATA +
Preference number: 5 (lower is better)
Translates to: YHSRCCVEYRGADQDRNIDSVCF*TTWACI
Trigger: TATGCAGGCCCATGTAGTCAAAAAGCAGACACTGTC...GATGTTCCGGTCCTGGTCTGCCCCTCTATACTCTACACAGCAGCGTGAATGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CTCTCAGCCCTTTATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGACCAGCATGATCTTATCTCCTaGGTAACCACTTCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: LSALYHSRCCVEYRGADQHDLIS*VTTSSA
Trigger: GGCAGAGGAAGTGGTTACCAAGGAGATAAGATCATG...CTGGTCTGCCCCTCTATACTCTACACAGCAGCGTGAATGATAAAGGGCTGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp ACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCCATGATCTTATCTCCTaGGTAACCACTTCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: TWGPALLAVSLTFLWSLFHDLIS*VTTSSA
Trigger: GGCAGAGGAAGTGGTTACCAAGGAGATAAGATCATG...GAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp GGAGACCCATGTAACGTTCTGTGTACACTGAGTCATAGTACTCCCACCGGGATAGGTTGTCTTCTGGAGTaGGGAGACCCATGTAACGTT +
Preference number: 5 (lower is better)
Translates to: GDPCNVLCTLSHSTPTGIGCLLE*GDPCNV
Trigger: AACGTTACATGGGTCTCCCAACTCCAGAAGACAACC...TATCCCGGTGGGAGTACTATGACTCAGTGTACACAGAACGTTACATGGGTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp AGCTCTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACAACAATTCCTATTTGTaGTTTCAGCAGCTGATGCAG +
Preference number: 5 (lower is better)
Translates to: SSSPRGADSSLLVLVCLDNNSYL*FQQLMQ
Trigger: CTGCATCAGCTGCTGAAACAACAAATAGGAATTGTT...GTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TCACTGGTTAGAGCTTCTATCCCGATGACTTCCCAGGTGCCTTTTGTAATAAATACCTGGGGGCCTGCGTaGCTGGCAGTTTCCCTTACA +
Preference number: 5 (lower is better)
Translates to: SLVRASIPMTSQVPFVINTWGPA*LAVSLT
Trigger: TGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGT...ATTTATTACAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTCTAACCAGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp GGAGACCCATGTAACGTTCTGTGTACACTGAGTCATAGTACTCCCACCGGGATAATCTGTAGCTGCTCGTaGGATCATGCTGGTTCCTCA +
Preference number: 5 (lower is better)
Translates to: GDPCNVLCTLSHSTPTGIICSCS*DHAGSS
Trigger: TGAGGAACCAGCATGATCCAACGAGCAGCTACAGAT...TATCCCGGTGGGAGTACTATGACTCAGTGTACACAGAACGTTACATGGGTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416189.6
CDS TCA 90 bp AGTTTCCCCAGTTGCCCCCTCTTTGTTCAGTCTTGCTCTTTAGCCTaGAGTGGCTGCCAAGCTCTAACTTCCTTAGGTCTTGGCCTAAAT +
Preference number: 5 (lower is better)
Translates to: SFPSCPLFVQSCSLA*SGCQALTSLGLGLN
Trigger: ATTTAGGCCAAGACCTAAGGAAGTTAGAGCTTGGCAGCCACTTCAGGCTAAAGAGCAAGACTGAACAAAGAGGGGGCAACTGGGGAAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS GCA 90 bp CATATGCTATGTCGCAGGCACCCTACTACACACTGGAGATACGATTaGAGGATTGGCCTCTACTGCGTAGAACCTGTCTTACTTCAGTCA +
Preference number: 5 (lower is better)
Translates to: HMLCRRHPTTHWRYD*RIGLYCVEPVLLQS
Trigger: TGACTGAAGTAAGACAGGTTCTACGCAGTAGAGGCCAATCCTGCAATCGTATCTCCAGTGTGTAGTAGGGTGCCTGCGACATAGCATATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS GCA 90 bp TTTGGGAAGTCAGCCAGGAAACTCACGTGCATCAGTCATCTTCCCTaGCCATTTTCAGATCAAAGGTTTATGGTCCTGGACTCTGCATGG +
Preference number: 5 (lower is better)
Translates to: FGKSARKLTCISHLP*PFSDQRFMVLDSAW
Trigger: CCATGCAGAGTCCAGGACCATAAACCTTTGATCTGAAAATGGGCAGGGAAGATGACTGATGCACGTGAGTTTCCTGGCTGACTTCCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS CCA 90 bp CATTCTTACTTGTGGACCACACAGAAATGGGCAGTGGACTGCATTTaGCCCATAAACCCTAGTGTGTTAACCCCTGTCCTGTATCAGTGG +
Preference number: 5 (lower is better)
Translates to: HSYLWTTQKWAVDCI*PINPSVLTPVLYQW
Trigger: CCACTGATACAGGACAGGGGTTAACACACTAGGGTTTATGGGCCAAATGCAGTCCACTGCCCATTTCTGTGTGGTCCACAAGTAAGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS-3UTR CAA 90 bp GTGCATTGGGCACCATTTGAACTGAGCACAGAGCAAATCATGTGTGTTAGAGGATCACAGCTCCTGCCTTaGGATATGGAACCCGTACAG +
Preference number: 5 (lower is better)
Translates to: VHWAPFELSTEQIMCVRGSQLLP*DMEPVQ
Trigger: CTGTACGGGTTCCATATCCAAAGGCAGGAGCTGTGA...TCCTCTAACACACATGATTTGCTCTGTGCTCAGTTCAAATGGTGCCCAATGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR CAA 90 bp CTCTCAGCCCTTTATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGACCAGCAAAGAACTTTACAGTaGGATTCACAGCTCCTGCCT +
Preference number: 5 (lower is better)
Translates to: LSALYHSRCCVEYRGADQQRTLQ*DSQLLP
Trigger: AGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTTG...CTGGTCTGCCCCTCTATACTCTACACAGCAGCGTGAATGATAAAGGGCTGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp ACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAGCAGGAGCAGTGATTaGTATGGAAGTTGCATTGGT +
Preference number: 5 (lower is better)
Translates to: TWGPALLAVSLTFLWSLFSRSSD*YGSCIG
Trigger: ACCAATGCAACTTCCATACAAATCACTGCTCCTGCT...GAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp GATCCCAGGACCATTGAGGTTACGTACCCTCCATATGACCAGCCCCAAATTGCAAGCAGGAGCAGTGATTaGTATGGAAGTTGCATTGGT +
Preference number: 5 (lower is better)
Translates to: DPRTIEVTYPPYDQPQIASRSSD*YGSCIG
Trigger: ACCAATGCAACTTCCATACAAATCACTGCTCCTGCT...TGCAATTTGGGGCTGGTCATATGGAGGGTACGTAACCTCAATGGTCCTGGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCAAAGAAATTCTTTCTaGTGTTGCCCATGTCACATC +
Preference number: 5 (lower is better)
Translates to: PARVGMLGLGFPAMPCYLQRNSF*CCPCHI
Trigger: GATGTGACATGGGCAACACAAGAAAGAATTTCTTTG...AAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp GCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCTCCAAAGAAATTCTTTCTaGTGTTGCCCATGTCACATC +
Preference number: 5 (lower is better)
Translates to: ARVGMLGLGFPAMPCYLLQRNSF*CCPCHI
Trigger: GATGTGACATGGGCAACACAAGAAAGAATTTCTTTG...GAGAAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CTCTCAGCCCTTTATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGACCAGTTATCCAAAGCTGAATaGTCTTCCAGGACTCTCAGC +
Preference number: 5 (lower is better)
Translates to: LSALYHSRCCVEYRGADQLSKAE*SSRTLS
Trigger: GCTGAGAGTCCTGGAAGACAATTCAGCTTTGGATAA...CTGGTCTGCCCCTCTATACTCTACACAGCAGCGTGAATGATAAAGGGCTGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp ATTCCACACTTGAACACGCCACTTCCCGATCCCAGGACCATTGAGGTTACGTACATGAAGTCCAGTTTTTaGGAGGGCATCTGGACATTC +
Preference number: 5 (lower is better)
Translates to: IPHLNTPLPDPRTIEVTYMKSSF*EGIWTF
Trigger: GAATGTCCAGATGCCCTCCAAAAAACTGGACTTCAT...GTACGTAACCTCAATGGTCCTGGGATCGGGAAGTGGCGTGTTCAAGTGTGGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGACCAGGACCGGAACATCATGAAGTCCAGTTTTTaGGAGGGCATCTGGACATTC +
Preference number: 5 (lower is better)
Translates to: YHSRCCVEYRGADQDRNIMKSSF*EGIWTF
Trigger: GAATGTCCAGATGCCCTCCAAAAAACTGGACTTCAT...GATGTTCCGGTCCTGGTCTGCCCCTCTATACTCTACACAGCAGCGTGAATGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACGACAGTGTCTGCTTTTaGACTACATGGGCCTGCATA +
Preference number: 5 (lower is better)
Translates to: WGPALLAVSLTFLWSLFNDSVCF*TTWACI
Trigger: TATGCAGGCCCATGTAGTCAAAAAGCAGACACTGTC...GTTGAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CAGAGACAATGCTCTGGCTTTGCCGTGGCATCCACACTAGCACATGGGGGCTGTTCTGGCTGCTTCAATTaGATCTTCAACTTCAAATGT +
Preference number: 5 (lower is better)
Translates to: QRQCSGFAVASTLAHGGCSGCFN*IFNFKC
Trigger: ACATTTGAAGTTGAAGATCAAATTGAAGCAGCCAGA...ACAGCCCCCATGTGCTAGTGTGGATGCCACGGCAAAGCCAGAGCATTGTCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494507.2
CDS-3UTR CAA 90 bp CTTCTCCGAGGGGAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGCAAATTGCAATTCGTTaGTTGTCCACAAATCCCATT +
Preference number: 5 (lower is better)
Translates to: LLRGELTVACSCWYAWTWQIAIR*LSTNPI
Trigger: AATGGGATTTGTGGACAACAAACGAATTGCAATTTG...CCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTCCCCTCGGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp GAGGGGCAGACCAGGACCGGAACATCTCAGCTGATAATACTTCGCCTCTTTACTATGACCAGCCCCAAATaGCAATTCGTTTGTTGTCCA +
Preference number: 5 (lower is better)
Translates to: EGQTRTGTSQLIILRLFTMTSPK*QFVCCP
Trigger: TGGACAACAAACGAATTGCAATTTGGGGCTGGTCAT...AGTAAAGAGGCGAAGTATTATCAGCTGAGATGTTCCGGTCCTGGTCTGCCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CAATCACATGAACAGGAGAGCAGTGTCTTGATACTCCCAGCATATGCGATATTGCCGATCCCAGGACCATaGAGGTTACGTACCCTCCAT +
Preference number: 5 (lower is better)
Translates to: QSHEQESSVLILPAYAILPIPGP*RLRTLH
Trigger: ATGGAGGGTACGTAACCTCAATGGTCCTGGGATCGG...CAATATCGCATATGCTGGGAGTATCAAGACACTGCTCTCCTGTTCATGTGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR CAA 90 bp CTGCTAGCTATTCCATGGTCTTCATCAGTATACCACATTGCCTGGAAATCCACTCCGATCCCAGGACCATaGAGGTTACGTACCCTCCAT +
Preference number: 5 (lower is better)
Translates to: LLAIPWSSSVYHIAWKSTPIPGP*RLRTLH
Trigger: ATGGAGGGTACGTAACCTCAATGGTCCTGGGATCGG...AGTGGATTTCCAGGCAATGTGGTATACTGATGAAGACCATGGAATAGCTAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TGTTTTTGTAGCACCTATAGCCATAACTGGCACCTGGGGGCCTGCGTTGCTGGCAACAATTCCTATTTGTaGTTTCAGCAGCTGATGCAG +
Preference number: 5 (lower is better)
Translates to: CFCSTYSHNWHLGACVAGNNSYL*FQQLMQ
Trigger: CTGCATCAGCTGCTGAAACAACAAATAGGAATTGTT...GCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGTGCTACAAAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp ACACGCCACTTCCCGATCCCAGGACCATTGAGGTTACGTACCCTCCATATGACCAACAATTCCTATTTGTaGTTTCAGCAGCTGATGCAG +
Preference number: 5 (lower is better)
Translates to: TRHFPIPGPLRLRTLHMTNNSYL*FQQLMQ
Trigger: CTGCATCAGCTGCTGAAACAACAAATAGGAATTGTT...GGTCATATGGAGGGTACGTAACCTCAATGGTCCTGGGATCGGGAAGTGGCGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp GTTAGAGCTTCTATCCCGATGACTTCCCAGGTGCCTTTTGTAATAAATGTGCAGCTCGTGTTGGTATGCTaGGACTTGGGTTCCCAGCCA +
Preference number: 5 (lower is better)
Translates to: VRASIPMTSQVPFVINVQLVLVC*DLGSQP
Trigger: TGGCTGGGAACCCAAGTCCAAGCATACCAACACGAG...CTGCACATTTATTACAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTCTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp GAGCTGACAGTAGCCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATTTCCCTTACATTTCTTaGGAGTCTTTTCAACTGCTG +
Preference number: 5 (lower is better)
Translates to: ELTVACSCWYAWTWVPSHFPYIS*ESFQLL
Trigger: CAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAA...ATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGGCTACTGTCAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGACCAGGACCGGAACATCGAGGATAATCCCTCTTaGCCTATCCATGGAAACAGA +
Preference number: 5 (lower is better)
Translates to: YHSRCCVEYRGADQDRNIEDNPS*PIHGNR
Trigger: TCTGTTTCCATGGATAGGCAAAGAGGGATTATCCTC...GATGTTCCGGTCCTGGTCTGCCCCTCTATACTCTACACAGCAGCGTGAATGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416189.6
CDS-3UTR CAA 90 bp AAAGAACTTTACAGTTGGATTCACAGCTCCTGCCTTTGGATATGGAACCCGTACCAGCTTTTGGGCCATTaGGGGAGTTTGGCGAAGAGG +
Preference number: 5 (lower is better)
Translates to: KELYSWIHSSCLWIWNPYQLLGH*GSLAKR
Trigger: CCTCTTCGCCAAACTCCCCAAATGGCCCAAAAGCTG...GTACGGGTTCCATATCCAAAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676479.1
CDS CCA 90 bp ATGTCGCAGGCACCCTACTACACACTGGAGATACGATTGCAGGATTaGCCTCTACTGCGTAGAACCTGTCTTACTTCAGTCAACAATGAA +
Preference number: 5 (lower is better)
Translates to: MSQAPYYTLEIRLQD*PLLRRTCLTSVNNE
Trigger: TTCATTGTTGACTGAAGTAAGACAGGTTCTACGCAGTAGAGGCCAATCCTGCAATCGTATCTCCAGTGTGTAGTAGGGTGCCTGCGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS-3UTR CAA 90 bp CAGGAGAGCAGTGTCTTGATACTCCCAGCATATGCGATATTGTGCTTCTTAACCGAACCCGTACAGTCTTaGGGTACTGCAGTGACTCAT +
Preference number: 5 (lower is better)
Translates to: QESSVLILPAYAILCFLTEPVQS*GTAVTH
Trigger: ATGAGTCACTGCAGTACCCAAAGACTGTACGGGTTC...GGTTAAGAAGCACAATATCGCATATGCTGGGAGTATCAAGACACTGCTCTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR CAA 90 bp ACACAAGTAGTGATCCCACGGAGCACAGCCCACAGCCTTCCTGATGTACTTAATAGCAGGAGCAGTGATTaGTATGGAAGTTGCATTGGT +
Preference number: 5 (lower is better)
Translates to: TQVVIPRSTAHSLPDVLNSRSSD*YGSCIG
Trigger: ACCAATGCAACTTCCATACAAATCACTGCTCCTGCT...ATTAAGTACATCAGGAAGGCTGTGGGCTGTGCTCCGTGGGATCACTACTTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434918.6
ENST00000678566.1
CDS-3UTR CAA 90 bp CTCCAGAGAAAATGGATGCTTCCGTACTGCTGTGATGGTGCCTTCAGGAATCTGAGCAGGAGCAGTGATTaGTATGGAAGTTGCATTGGT +
Preference number: 5 (lower is better)
Translates to: LQRKWMLPYCCDGAFRNLSRSSD*YGSCIG
Trigger: ACCAATGCAACTTCCATACAAATCACTGCTCCTGCT...CAGATTCCTGAAGGCACCATCACAGCAGTACGGAAGCATCCATTTTCTCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434918.6
ENST00000678566.1
CDS-3UTR CAA 90 bp TGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACTTATCCAAAGCTGAATaGTCTTCCAGGACTCTCAGC +
Preference number: 5 (lower is better)
Translates to: WGPALLAVSLTFLWSLFNLSKAE*SSRTLS
Trigger: GCTGAGAGTCCTGGAAGACAATTCAGCTTTGGATAA...GTTGAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp ACACGCCACTTCCCGATCCCAGGACCATTGAGGTTACGTACCCTCCATATGACCTCTGGCTGCTTCAATTaGATCTTCAACTTCAAATGT +
Preference number: 5 (lower is better)
Translates to: TRHFPIPGPLRLRTLHMTSGCFN*IFNFKC
Trigger: ACATTTGAAGTTGAAGATCAAATTGAAGCAGCCAGA...GGTCATATGGAGGGTACGTAACCTCAATGGTCCTGGGATCGGGAAGTGGCGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp GTCATAGTACTCCCACCGGGATACAGGCGCCACGGCTATTCCACACTTGAACACTCTGGCTGCTTCAATTaGATCTTCAACTTCAAATGT +
Preference number: 5 (lower is better)
Translates to: VIVLPPGYRRHGYSTLEHSGCFN*IFNFKC
Trigger: ACATTTGAAGTTGAAGATCAAATTGAAGCAGCCAGA...GTGTTCAAGTGTGGAATAGCCGTGGCGCCTGTATCCCGGTGGGAGTACTATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CCTGCTCGTGTTGGTATGCTTGGACTTGGGTTCCCAGCCATGCCCTGCTATCTTCAAATTGCAATTCGTTaGTTGTCCACAAATCCCATT +
Preference number: 5 (lower is better)
Translates to: PARVGMLGLGFPAMPCYLQIAIR*LSTNPI
Trigger: AATGGGATTTGTGGACAACAAACGAATTGCAATTTG...AAGATAGCAGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAACACGAGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TTTGTAGCACCTATAGCCATAACTGGCACCTGGGGGCCTGCGTTGCTGGCAGTTCAAATTGCAATTCGTTaGTTGTCCACAAATCCCATT +
Preference number: 5 (lower is better)
Translates to: FVAPIAITGTWGPALLAVQIAIR*LSTNPI
Trigger: AATGGGATTTGTGGACAACAAACGAATTGCAATTTG...AACTGCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGTGCTACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TGTTTTTGTAGCACCTATAGCCATAACTGGCACCTGGGGGCCTGCGTTGCTGGCCAAATTGCAATTCGTTaGTTGTCCACAAATCCCATT +
Preference number: 5 (lower is better)
Translates to: CFCSTYSHNWHLGACVAGQIAIR*LSTNPI
Trigger: AATGGGATTTGTGGACAACAAACGAATTGCAATTTG...GCCAGCAACGCAGGCCCCCAGGTGCCAGTTATGGCTATAGGTGCTACAAAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TATAGAGGGGCAGACCAGGACCGGAACATCTCAGCTGATAATACTTCGCCTCTTATGACCAGCCCCAAATaGCAATTCGTTTGTTGTCCA +
Preference number: 5 (lower is better)
Translates to: YRGADQDRNISADNTSPLMTSPK*QFVCCP
Trigger: TGGACAACAAACGAATTGCAATTTGGGGCTGGTCAT...AAGAGGCGAAGTATTATCAGCTGAGATGTTCCGGTCCTGGTCTGCCCCTCTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACATGACCAGCCCCAAATaGCAATTCGTTTGTTGTCCA +
Preference number: 5 (lower is better)
Translates to: WGPALLAVSLTFLWSLFNMTSPK*QFVCCP
Trigger: TGGACAACAAACGAATTGCAATTTGGGGCTGGTCAT...GTTGAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CAGGAGAGCAGTGTCTTGATACTCCCAGCATATGCGATATTGTGCTTCTTAACCGGTTGTCTTCTGGAGTaGGGAGACCCATGTAACGTT +
Preference number: 5 (lower is better)
Translates to: QESSVLILPAYAILCFLTGCLLE*GDPCNV
Trigger: AACGTTACATGGGTCTCCCAACTCCAGAAGACAACC...GGTTAAGAAGCACAATATCGCATATGCTGGGAGTATCAAGACACTGCTCTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR CAA 90 bp TGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACCATCAGTATACCACATaGCCTGGAAATCCACTCCAA +
Preference number: 5 (lower is better)
Translates to: WGPALLAVSLTFLWSLFNHQYTT*PGNPLQ
Trigger: TTGGAGTGGATTTCCAGGCAATGTGGTATACTGATG...GTTGAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CTGCCTTTGGATATGGAACCCGTACAGTCTTTGGGTACTGCAGTGACTCATCAGCATCAGTATACCACATaGCCTGGAAATCCACTCCAA +
Preference number: 5 (lower is better)
Translates to: LPLDMEPVQSLGTAVTHQHQYTT*PGNPLQ
Trigger: TTGGAGTGGATTTCCAGGCAATGTGGTATACTGATG...CTGATGAGTCACTGCAGTACCCAAAGACTGTACGGGTTCCATATCCAAAGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TTCTCAGAAAACTGTGCCAGTCTGGCTGTGAACAGCTCTTCTCCGAGGGGAGCTAACAATTCCTATTTGTaGTTTCAGCAGCTGATGCAG +
Preference number: 5 (lower is better)
Translates to: FSENCASLAVNSSSPRGANNSYL*FQQLMQ
Trigger: CTGCATCAGCTGCTGAAACAACAAATAGGAATTGTT...AGCTCCCCTCGGAGAAGAGCTGTTCACAGCCAGACTGGCACAGTTTTCTGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TTTCATCTTTTAACAGGGCAAGCTGATGTGTTCACATCTCAGTTTCAAGCTGCCTTGGTATGCTTGGACTaGGGTTCCCAGCCATGCCCT +
Preference number: 5 (lower is better)
Translates to: FHLLTGQADVFTSQFQAALVCLD*GSQPCP
Trigger: AGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAA...GGCAGCTTGAAACTGAGATGTGAACACATCAGCTTGCCCTGTTAAAAGATGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp GGTATATATATGTTGGTGTGCTGTGCTGCTAGCTATTCCATGGTCTTCATCAGTCTCGTGTTGGTATGCTaGGACTTGGGTTCCCAGCCA +
Preference number: 5 (lower is better)
Translates to: GIYMLVCCAASYSMVFISLVLVC*DLGSQP
Trigger: TGGCTGGGAACCCAAGTCCAAGCATACCAACACGAG...ACTGATGAAGACCATGGAATAGCTAGCAGCACAGCACACCAACATATATATACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp AAAGAACTTTACAGTTGGATTCACAGCTCCTGCCTTTGGATATGGAACCCGTACAGTAGCCTGCTCGTGTaGGTATGCTTGGACTTGGGT +
Preference number: 5 (lower is better)
Translates to: KELYSWIHSSCLWIWNPYSSLLV*VCLDLG
Trigger: ACCCAAGTCCAAGCATACCAACACGAGCAGGCTACT...GTACGGGTTCCATATCCAAAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TCACTGGTTAGAGCTTCTATCCCGATGACTTCCCAGGTGCCTTTTGTAATAAATGGCAGCTGTGTCACCTaGCCTCTGGAACCATTGATC +
Preference number: 5 (lower is better)
Translates to: SLVRASIPMTSQVPFVINGSCVT*PLEPLI
Trigger: GATCAATGGTTCCAGAGGCAAGGTGACACAGCTGCC...ATTTATTACAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTCTAACCAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416189.6
CDS-3UTR CAA 90 bp AAAGAATTAGCCCAGAAAGAGGAAACTAGACCCCACCAGCAACTTCCCTCCCCTCCAGCATATGCGATATaGTGCTTCTTAACCCCAAAC +
Preference number: 5 (lower is better)
Translates to: KELAQKEETRPHQQLPSPPAYAI*CFLTPN
Trigger: GTTTGGGGTTAAGAAGCACAATATCGCATATGCTGG...AGGGGAGGGAAGTTGCTGGTGGGGTCTAGTTTCCTCTTTCTGGGCTAATTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS TCA 90 bp TCAAGCTGTTGGCTTCAGATTCCCAGTTCATACTCGCTCCCTCTATaGAACCTCCACCCATCCATTTGGAAAATGTTGCTAGCTAGCTTC +
Preference number: 5 (lower is better)
Translates to: SSCWLQIPSSYSLPL*NLHPSIWKMLLASF
Trigger: GAAGCTAGCTAGCAACATTTTCCAAATGGATGGGTGGAGGTTTCATAGAGGGAGCGAGTATGAACTGGGAATCTGAAGCCAACAGCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS TCA 90 bp ATCCAGTCTGACGCTTCTGCATCTGCCCAATGCAGGGGAGCTAAATaGGAACCTGGAAAGGTGAATACACTTTACCCAAGAAAGGCAATA +
Preference number: 5 (lower is better)
Translates to: IQSDASASAQCRGAK*EPGKVNTLYPRKAI
Trigger: TATTGCCTTTCTTGGGTAAAGTGTATTCACCTTTCCAGGTTCTCATTTAGCTCCCCTGCATTGGGCAGATGCAGAAGCGTCAGACTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS GCA 90 bp CACCCTACTACACACTGGAGATACGATTGCAGGATTGGCCTCTACTaGGTAGAACCTGTCTTACTTCAGTCAACAATGAATGTACTGCTC +
Preference number: 5 (lower is better)
Translates to: HPTTHWRYDCRIGLY*VEPVLLQSTMNVLL
Trigger: GAGCAGTACATTCATTGTTGACTGAAGTAAGACAGGTTCTACGCAGTAGAGGCCAATCCTGCAATCGTATCTCCAGTGTGTAGTAGGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS-3UTR CAA 90 bp ATTTACAATGCTTTCCCATCACCCTTGCTGTGTTTTTGTAGCACCTATAGCCATGCATCATCTGTGCCTTaGTTCAGCAGAACCACGGGC +
Preference number: 5 (lower is better)
Translates to: IYNAFPSPLLCFCSTYSHASSVP*FSRTTG
Trigger: GCCCGTGGTTCTGCTGAACAAAGGCACAGATGATGC...ATGGCTATAGGTGCTACAAAAACACAGCAAGGGTGATGGGAAAGCATTGTAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CATAAATGTCATATGAAGCTGTGTAGGAATGCCTCCATTGCTTCACGTAGTTGTGCATCATCTGTGCCTTaGTTCAGCAGAACCACGGGC +
Preference number: 5 (lower is better)
Translates to: HKCHMKLCRNASIASRSCASSVP*FSRTTG
Trigger: GCCCGTGGTTCTGCTGAACAAAGGCACAGATGATGC...ACAACTACGTGAAGCAATGGAGGCATTCCTACACAGCTTCATATGACATTTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413651.3
ENST00000676479.1
CDS-3UTR CAA 90 bp CTGGTTAGAGCTTCTATCCCGATGACTTCCCAGGTGCCTTTTGTAATAAATGTGGAACCCGTACAGTCTTaGGGTACTGCAGTGACTCAT +
Preference number: 5 (lower is better)
Translates to: LVRASIPMTSQVPFVINVEPVQS*GTAVTH
Trigger: ATGAGTCACTGCAGTACCCAAAGACTGTACGGGTTC...CACATTTATTACAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTCTAACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CAGTGTCTGCTTTTTGACTACATGGGCCTGCATACACATCTAATAGTAGAGGATTCACAGCTCCTGCCTTaGGATATGGAACCCGTACAG +
Preference number: 5 (lower is better)
Translates to: QCLLFDYMGLHTHLIVEDSQLLP*DMEPVQ
Trigger: CTGTACGGGTTCCATATCCAAAGGCAGGAGCTGTGA...ATCCTCTACTATTAGATGTGTATGCAGGCCCATGTAGTCAAAAAGCAGACACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp GGCGCTTACACAGCATGCATGGGAAGGAATGATTATCCCATTAAGCCCACTTGTCAAAGAACTTTACAGTaGGATTCACAGCTCCTGCCT +
Preference number: 5 (lower is better)
Translates to: GAYTACMGRNDYPIKPTCQRTLQ*DSQLLP
Trigger: AGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTTG...ACAAGTGGGCTTAATGGGATAATCATTCCTTCCCATGCATGCTGTGTAAGCGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR CAA 90 bp AGGACCATTGAGGTTACGTACCCTCCATATGACCAGCCCCAAATTGCAATTCGTAGCAGGAGCAGTGATTaGTATGGAAGTTGCATTGGT +
Preference number: 5 (lower is better)
Translates to: RTIEVTYPPYDQPQIAIRSRSSD*YGSCIG
Trigger: ACCAATGCAACTTCCATACAAATCACTGCTCCTGCT...ACGAATTGCAATTTGGGGCTGGTCATATGGAGGGTACGTAACCTCAATGGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGACCAGGACCGGAACATCAAATTCTTTCTTGTGTaGCCCATGTCACATCACACA +
Preference number: 5 (lower is better)
Translates to: YHSRCCVEYRGADQDRNIKFFLV*PMSHHT
Trigger: TGTGTGATGTGACATGGGCAACACAAGAAAGAATTT...GATGTTCCGGTCCTGGTCTGCCCCTCTATACTCTACACAGCAGCGTGAATGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGACCAGGACCGGAACATCCAAAGAAATTCTTTCTaGTGTTGCCCATGTCACATC +
Preference number: 5 (lower is better)
Translates to: YHSRCCVEYRGADQDRNIQRNSF*CCPCHI
Trigger: GATGTGACATGGGCAACACAAGAAAGAATTTCTTTG...GATGTTCCGGTCCTGGTCTGCCCCTCTATACTCTACACAGCAGCGTGAATGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp GGAGAGCAGTGTCTTGATACTCCCAGCATATGCGATATTGTGCTTCTTAACCCCATGAAGTCCAGTTTTTaGGAGGGCATCTGGACATTC +
Preference number: 5 (lower is better)
Translates to: GEQCLDTPSICDIVLLNPMKSSF*EGIWTF
Trigger: GAATGTCCAGATGCCCTCCAAAAAACTGGACTTCAT...GGGGTTAAGAAGCACAATATCGCATATGCTGGGAGTATCAAGACACTGCTCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR CAA 90 bp GTGCATTGGGCACCATTTGAACTGAGCACAGAGCAAATCATGTGTGTTAGAGGACATGATCTTATCTCCTaGGTAACCACTTCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: VHWAPFELSTEQIMCVRGHDLIS*VTTSSA
Trigger: GGCAGAGGAAGTGGTTACCAAGGAGATAAGATCATG...TCCTCTAACACACATGATTTGCTCTGTGCTCAGTTCAAATGGTGCCCAATGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR CAA 90 bp CATATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGCCGATCCCAGGACCATaGAGGTTACGTACCCTCCAT +
Preference number: 5 (lower is better)
Translates to: HMTSPKLQFVCCPQIPFLPIPGP*RLRTLH
Trigger: ATGGAGGGTACGTAACCTCAATGGTCCTGGGATCGG...CAAAAATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp AAAACACCCAATCCATTTCCAAATTTGACTCAAAGGGCGCTTACACAGCATGCAACGGCTATTCCACACTaGAACACGCCACTTCCCGAT +
Preference number: 5 (lower is better)
Translates to: KTPNPFPNLTQRALTQHATAIPH*NTPLPD
Trigger: ATCGGGAAGTGGCGTGTTCAAGTGTGGAATAGCCGT...TGCATGCTGTGTAAGCGCCCTTTGAGTCAAATTTGGAAATGGATTGGGTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR CAA 90 bp GTGGGTATATATATGTTGGTGTGCTGTGCTGCTAGCTATTCCATGGTCTTCATCGGTTGTCTTCTGGAGTaGGGAGACCCATGTAACGTT +
Preference number: 5 (lower is better)
Translates to: VGIYMLVCCAASYSMVFIGCLLE*GDPCNV
Trigger: AACGTTACATGGGTCTCCCAACTCCAGAAGACAACC...GATGAAGACCATGGAATAGCTAGCAGCACAGCACACCAACATATATATACCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACTGCTGTGGTTTTTTGGTATGCTTGGACTaGGGTTCCCAGCCATGCCCT +
Preference number: 5 (lower is better)
Translates to: LLAVSLTFLWSLFNCCGFLVCLD*GSQPCP
Trigger: AGGGCATGGCTGGGAACCCAAGTCCAAGCATACCAA...AAAACCACAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CTCTCAGCCCTTTATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGACCAGTTCCCTTACATTTCTTaGGAGTCTTTTCAACTGCTG +
Preference number: 5 (lower is better)
Translates to: LSALYHSRCCVEYRGADQFPYIS*ESFQLL
Trigger: CAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAA...CTGGTCTGCCCCTCTATACTCTACACAGCAGCGTGAATGATAAAGGGCTGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CTTGCCATCCCTTTAAAGAAGAGAACAACATTTGAACCAGTCCAGTTAGAAAAAACCTGGGGGCCTGCGTaGCTGGCAGTTTCCCTTACA +
Preference number: 5 (lower is better)
Translates to: LAIPLKKRTTFEPVQLEKTWGPA*LAVSLT
Trigger: TGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGT...TTTTTCTAACTGGACTGGTTCAAATGTTGTTCTCTTCTTTAAAGGGATGGCAAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TATTTTCATCTTTTAACAGGGCAAGCTGATGTGTTCACATCTCAGTTTCAAGCTACCTGGGGGCCTGCGTaGCTGGCAGTTTCCCTTACA +
Preference number: 5 (lower is better)
Translates to: YFHLLTGQADVFTSQFQATWGPA*LAVSLT
Trigger: TGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGT...AGCTTGAAACTGAGATGTGAACACATCAGCTTGCCCTGTTAAAAGATGAAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CTGGTTAGAGCTTCTATCCCGATGACTTCCCAGGTGCCTTTTGTAATAAATGTGGCTTTCCCATCACCCTaGCTGTGTTTTTGTAGCACC +
Preference number: 5 (lower is better)
Translates to: LVRASIPMTSQVPFVINVAFPSP*LCFCST
Trigger: GGTGCTACAAAAACACAGCAAGGGTGATGGGAAAGC...CACATTTATTACAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTCTAACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CCTCCATATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTGCTTTCCCATCACCCTaGCTGTGTTTTTGTAGCACC +
Preference number: 5 (lower is better)
Translates to: PPYDQPQIAIRLLSTNPIAFPSP*LCFCST
Trigger: GGTGCTACAAAAACACAGCAAGGGTGATGGGAAAGC...AATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATATGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp GGCGCTTACACAGCATGCATGGGAAGGAATGATTATCCCATTAAGCCCACTTGTGCAACTTCCCTCCCCTaGCACAAAGTTTTTCTATAC +
Preference number: 5 (lower is better)
Translates to: GAYTACMGRNDYPIKPTCATSLP*HKVFLY
Trigger: GTATAGAAAAACTTTGTGCAAGGGGAGGGAAGTTGC...ACAAGTGGGCTTAATGGGATAATCATTCCTTCCCATGCATGCTGTGTAAGCGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS GCA 90 bp AAAAACCATTCTTACTTGTGGACCACACAGAAATGGGCAGTGGACTaGATTTGGCCCATAAACCCTAGTGTGTTAACCCCTGTCCTGTAT +
Preference number: 5 (lower is better)
Translates to: KNHSYLWTTQKWAVD*IWPINPSVLTPVLY
Trigger: ATACAGGACAGGGGTTAACACACTAGGGTTTATGGGCCAAATGCAGTCCACTGCCCATTTCTGTGTGGTCCACAAGTAAGAATGGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS-3UTR CAA 90 bp TTACAACAAAGAACTTTACAGTTGGATTCACAGCTCCTGCCTTTGGATATGGAAGCATCATCTGTGCCTTaGTTCAGCAGAACCACGGGC +
Preference number: 5 (lower is better)
Translates to: LQQRTLQLDSQLLPLDMEASSVP*FSRTTG
Trigger: GCCCGTGGTTCTGCTGAACAAAGGCACAGATGATGC...TTCCATATCCAAAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTTGTTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416189.6
ENST00000494507.2
ENST00000676479.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TTGGTGACTGAGCTGAGAGAGTCTGTATTTACAACAAAGAACTTTACAGTTGGAGCATCATCTGTGCCTTaGTTCAGCAGAACCACGGGC +
Preference number: 5 (lower is better)
Translates to: LVTELRESVFTTKNFTVGASSVP*FSRTTG
Trigger: GCCCGTGGTTCTGCTGAACAAAGGCACAGATGATGC...TCCAACTGTAAAGTTCTTTGTTGTAAATACAGACTCTCTCAGCTCAGTCACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416189.6
ENST00000494507.2
ENST00000676479.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACAAATTCTTTCTTGTGTaGCCCATGTCACATCACACA +
Preference number: 5 (lower is better)
Translates to: WGPALLAVSLTFLWSLFNKFFLV*PMSHHT
Trigger: TGTGTGATGTGACATGGGCAACACAAGAAAGAATTT...GTTGAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp AAAGAATTAGCCCAGAAAGAGGAAACTAGACCCCACCAGCAACTTCCCTCCCCTCAAAGAAATTCTTTCTaGTGTTGCCCATGTCACATC +
Preference number: 5 (lower is better)
Translates to: KELAQKEETRPHQQLPSPQRNSF*CCPCHI
Trigger: GATGTGACATGGGCAACACAAGAAAGAATTTCTTTG...AGGGGAGGGAAGTTGCTGGTGGGGTCTAGTTTCCTCTTTCTGGGCTAATTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR CAA 90 bp TCTTACTCTGTAATGGTCAAGGTTGTCTTCTGGAGTTGGGAGACCCATGTAACGTTATCCAAAGCTGAATaGTCTTCCAGGACTCTCAGC +
Preference number: 5 (lower is better)
Translates to: SYSVMVKVVFWSWETHVTLSKAE*SSRTLS
Trigger: GCTGAGAGTCCTGGAAGACAATTCAGCTTTGGATAA...CGTTACATGGGTCTCCCAACTCCAGAAGACAACCTTGACCATTACAGAGTAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494507.2
CDS-3UTR CAA 90 bp ACCTGGGGGCCTGCGTTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCTCTGGCTGCTTCAATTaGATCTTCAACTTCAAATGT +
Preference number: 5 (lower is better)
Translates to: TWGPALLAVSLTFLWSLFSGCFN*IFNFKC
Trigger: ACATTTGAAGTTGAAGATCAAATTGAAGCAGCCAGA...GAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAACGCAGGCCCCCAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp AACTTCAAATGTTCCCAGTCTTCTGTTGATTGCATGCATGATCTTATCTCCTTGCCGATCCCAGGACCATaGAGGTTACGTACCCTCCAT +
Preference number: 5 (lower is better)
Translates to: NFKCSQSSVDCMHDLISLPIPGP*RLRTLH
Trigger: ATGGAGGGTACGTAACCTCAATGGTCCTGGGATCGG...CAAGGAGATAAGATCATGCATGCAATCAACAGAAGACTGGGAACATTTGAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CTCATCAGAGTAGAAGGAGTATTCAATAAGTGGGACTTCTGTGTCGTTAAATTGCCGATCCCAGGACCATaGAGGTTACGTACCCTCCAT +
Preference number: 5 (lower is better)
Translates to: LIRVEGVFNKWDFCVVKLPIPGP*RLRTLH
Trigger: ATGGAGGGTACGTAACCTCAATGGTCCTGGGATCGG...CAATTTAACGACACAGAAGTCCCACTTATTGAATACTCCTTCTACTCTGATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGACCAGGACCGGAACATCAGAGAAAGATCCACTTaGCCATATGAAATGTACTGT +
Preference number: 5 (lower is better)
Translates to: YHSRCCVEYRGADQDRNIRERST*PYEMYC
Trigger: ACAGTACATTTCATATGGCAAAGTGGATCTTTCTCT...GATGTTCCGGTCCTGGTCTGCCCCTCTATACTCTACACAGCAGCGTGAATGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416189.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CTCTCAGCCCTTTATCATTCACGCTGCTGTGTAGAGTATAGAGGGGCAGACCAGAGAGAAAGATCCACTTaGCCATATGAAATGTACTGT +
Preference number: 5 (lower is better)
Translates to: LSALYHSRCCVEYRGADQRERST*PYEMYC
Trigger: ACAGTACATTTCATATGGCAAAGTGGATCTTTCTCT...CTGGTCTGCCCCTCTATACTCTACACAGCAGCGTGAATGATAAAGGGCTGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416189.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR CAA 90 bp ATTTACAATGCTTTCCCATCACCCTTGCTGTGTTTTTGTAGCACCTATAGCCATGTAGCATCATTGCCTTaGTTCAGCAGAACCACGGGC +
Preference number: 5 (lower is better)
Translates to: IYNAFPSPLLCFCSTYSHVASLP*FSRTTG
Trigger: GCCCGTGGTTCTGCTGAACAAAGGCAATGATGCTAC...ATGGCTATAGGTGCTACAAAAACACAGCAAGGGTGATGGGAAAGCATTGTAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676624.1
ENST00000676810.1
CDS-3UTR CAA 90 bp GGAGACCCATGTAACGTTCTGTGTACACTGAGTCATAGTACTCCCACCGGGATAGCCAGAAAGTCAGGTTaGAATATAGATTCGTACTTG +
Preference number: 5 (lower is better)
Translates to: GDPCNVLCTLSHSTPTGIARKSG*NIDSYL
Trigger: CAAGTACGAATCTATATTCAAACCTGACTTTCTGGC...TATCCCGGTGGGAGTACTATGACTCAGTGTACACAGAACGTTACATGGGTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434918.6
ENST00000678566.1
CDS GCA 90 bp GTTCTGAATCCTCCTGAGCCACTGCAAAGAAATTCTTTCTTGTGTTaGCCATGTCACATCACACAAGTAGTGATCCCTGGAAGGAAGAAA +
Preference number: 5 (lower is better)
Translates to: VLNPPEPLQRNSFLC*PCHITQVVIPGRKK
Trigger: TTTCTTCCTTCCAGGGATCACTACTTGTGTGATGTGACATGGGCAACACAAGAAAGAATTTCTTTGCAGTGGCTCAGGAGGATTCAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677015.1
ENST00000678583.1
CDS-3UTR CAA 90 bp TTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGAAAATTGTCTGGCTGCTTGCATCATCTGTGCCTTaGTTCAGCAGAACCACGGGC +
Preference number: 5 (lower is better)
Translates to: LQFVCCPQIPFLKIVWLLASSVP*FSRTTG
Trigger: GCCCGTGGTTCTGCTGAACAAAGGCACAGATGATGC...AAGCAGCCAGACAATTTTCAAAAATGGGATTTGTGGACAACAAACGAATTGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000416189.6
ENST00000494507.2
ENST00000676479.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp AAAACACCCAATCCATTTCCAAATTTGACTCAAAGGGCGCTTACACAGCATGCAGTGACCCACTGTGTGTaGTTTGGAATCCTCTCTTCT +
Preference number: 5 (lower is better)
Translates to: KTPNPFPNLTQRALTQHAVTHCV*FGILSS
Trigger: AGAAGAGAGGATTCCAAACAACACACAGTGGGTCAC...TGCATGCTGTGTAAGCGCCCTTTGAGTCAAATTTGGAAATGGATTGGGTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR CAA 90 bp TTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACTGCTGTGGTTTTGAACCCGTACAGTCTTaGGGTACTGCAGTGACTCAT +
Preference number: 5 (lower is better)
Translates to: LLAVSLTFLWSLFNCCGFEPVQS*GTAVTH
Trigger: ATGAGTCACTGCAGTACCCAAAGACTGTACGGGTTC...AAAACCACAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CATATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGGAACCCGTACAGTCTTaGGGTACTGCAGTGACTCAT +
Preference number: 5 (lower is better)
Translates to: HMTSPKLQFVCCPQIPFLEPVQS*GTAVTH
Trigger: ATGAGTCACTGCAGTACCCAAAGACTGTACGGGTTC...CAAAAATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TTTACAACAAAGAACTTTACAGTTGGATTCACAGCTCCTGCCTTTGGATATGGATCACAGCTCCTGCCTTaGGATATGGAACCCGTACAG +
Preference number: 5 (lower is better)
Translates to: FTTKNFTVGFTAPAFGYGSQLLP*DMEPVQ
Trigger: CTGTACGGGTTCCATATCCAAAGGCAGGAGCTGTGA...TCCATATCCAAAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTTGTTGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR CAA 90 bp GGAGAGCAGTGTCTTGATACTCCCAGCATATGCGATATTGTGCTTCTTAACCCCAAATTCTTTCTTGTGTaGCCCATGTCACATCACACA +
Preference number: 5 (lower is better)
Translates to: GEQCLDTPSICDIVLLNPKFFLV*PMSHHT
Trigger: TGTGTGATGTGACATGGGCAACACAAGAAAGAATTT...GGGGTTAAGAAGCACAATATCGCATATGCTGGGAGTATCAAGACACTGCTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR CAA 90 bp AAAGAACTTTACAGTTGGATTCACAGCTCCTGCCTTTGGATATGGAACCCGTACTTATCCAAAGCTGAATaGTCTTCCAGGACTCTCAGC +
Preference number: 5 (lower is better)
Translates to: KELYSWIHSSCLWIWNPYLSKAE*SSRTLS
Trigger: GCTGAGAGTCCTGGAAGACAATTCAGCTTTGGATAA...GTACGGGTTCCATATCCAAAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CAATCACATGAACAGGAGAGCAGTGTCTTGATACTCCCAGCATATGCGATATTGTTATCCAAAGCTGAATaGTCTTCCAGGACTCTCAGC +
Preference number: 5 (lower is better)
Translates to: QSHEQESSVLILPAYAILLSKAE*SSRTLS
Trigger: GCTGAGAGTCCTGGAAGACAATTCAGCTTTGGATAA...CAATATCGCATATGCTGGGAGTATCAAGACACTGCTCTCCTGTTCATGTGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR CAA 90 bp ATAAATTCTGTAATGGTCAAGGTTGTCTTCTGGAGTTGGGAGACCCATGTAACGCATGATCTTATCTCCTaGGTAACCACTTCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: INSVMVKVVFWSWETHVTHDLIS*VTTSSA
Trigger: GGCAGAGGAAGTGGTTACCAAGGAGATAAGATCATG...CGTTACATGGGTCTCCCAACTCCAGAAGACAACCTTGACCATTACAGAATTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416189.6
CDS-3UTR CAA 90 bp TCACTGGTTAGAGCTTCTATCCCGATGACTTCCCAGGTGCCTTTTGTAATAAATCATGATCTTATCTCCTaGGTAACCACTTCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: SLVRASIPMTSQVPFVINHDLIS*VTTSSA
Trigger: GGCAGAGGAAGTGGTTACCAAGGAGATAAGATCATG...ATTTATTACAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTCTAACCAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAGCTGATGCAGAAACCGATCCCAGGACCATaGAGGTTACGTACCCTCCAT +
Preference number: 5 (lower is better)
Translates to: QSLHKNNSYLLFQQLMQKPIPGP*RLRTLH
Trigger: ATGGAGGGTACGTAACCTCAATGGTCCTGGGATCGG...TTTCTGCATCAGCTGCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp AACTTCAAATGTTCCCAGTCTTCTGTTGATTGCATGCATGATCTTATCTCCTTGACGGCTATTCCACACTaGAACACGCCACTTCCCGAT +
Preference number: 5 (lower is better)
Translates to: NFKCSQSSVDCMHDLISLTAIPH*NTPLPD
Trigger: ATCGGGAAGTGGCGTGTTCAAGTGTGGAATAGCCGT...CAAGGAGATAAGATCATGCATGCAATCAACAGAAGACTGGGAACATTTGAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TTACAACAAAGAACTTTACAGTTGGATTCACAGCTCCTGCCTTTGGATATGGAAACGGCTATTCCACACTaGAACACGCCACTTCCCGAT +
Preference number: 5 (lower is better)
Translates to: LQQRTLQLDSQLLPLDMETAIPH*NTPLPD
Trigger: ATCGGGAAGTGGCGTGTTCAAGTGTGGAATAGCCGT...TTCCATATCCAAAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTTGTTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CTCATCAGAGTAGAAGGAGTATTCAATAAGTGGGACTTCTGTGTCGTTAAATTGACGGCTATTCCACACTaGAACACGCCACTTCCCGAT +
Preference number: 5 (lower is better)
Translates to: LIRVEGVFNKWDFCVVKLTAIPH*NTPLPD
Trigger: ATCGGGAAGTGGCGTGTTCAAGTGTGGAATAGCCGT...CAATTTAACGACACAGAAGTCCCACTTATTGAATACTCCTTCTACTCTGATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR CAA 90 bp AATATCCATGACCGAATAGTTCTGAATCCTCCTGAGCCACTGCAAAGAAATTCTGGTTGTCTTCTGGAGTaGGGAGACCCATGTAACGTT +
Preference number: 5 (lower is better)
Translates to: NIHDRIVLNPPEPLQRNSGCLLE*GDPCNV
Trigger: AACGTTACATGGGTCTCCCAACTCCAGAAGACAACC...AGAATTTCTTTGCAGTGGCTCAGGAGGATTCAGAACTATTCGGTCATGGATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAGCTGATGCAGAAACTCGTGTTGGTATGCTaGGACTTGGGTTCCCAGCCA +
Preference number: 5 (lower is better)
Translates to: QSLHKNNSYLLFQQLMQKLVLVC*DLGSQP
Trigger: TGGCTGGGAACCCAAGTCCAAGCATACCAACACGAG...TTTCTGCATCAGCTGCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TTACAACAAAGAACTTTACAGTTGGATTCACAGCTCCTGCCTTTGGATATGGAAAGTAGCCTGCTCGTGTaGGTATGCTTGGACTTGGGT +
Preference number: 5 (lower is better)
Translates to: LQQRTLQLDSQLLPLDMESSLLV*VCLDLG
Trigger: ACCCAAGTCCAAGCATACCAACACGAGCAGGCTACT...TTCCATATCCAAAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTTGTTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS TCA 90 bp AGCAAAGCCCTCTCCTCACCTGTGGGACCTGTCATATTGTCATACTaGAGGACCATAGCTTTGTCCTTCTTCAGAATTCATAGATCAATT +
Preference number: 5 (lower is better)
Translates to: SKALSSPVGPVILSY*RTIALSFFRIHRSI
Trigger: AATTGATCTATGAATTCTGAAGAAGGACAAAGCTATGGTCCTTCAGTATGACAATATGACAGGTCCCACAGGTGAGGAGAGGGCTTTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS GCA 90 bp TCAACTGGAAATCATATTGGAGGGAAAAATGCTACAAAGAGCAACTaGAACCGTGGAATGATTAATTCAGTGAATCACCCGAGGAAGCGG +
Preference number: 5 (lower is better)
Translates to: STGNHIGGKNATKSN*NRGMINSVNHPRKR
Trigger: CCGCTTCCTCGGGTGATTCACTGAATTAATCATTCCACGGTTGCAGTTGCTCTTTGTAGCATTTTTCCCTCCAATATGATTTCCAGTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS-3UTR CAA 90 bp CATATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGGTGACCCACTGTGTGTaGTTTGGAATCCTCTCTTCT +
Preference number: 5 (lower is better)
Translates to: HMTSPKLQFVCCPQIPFLVTHCV*FGILSS
Trigger: AGAAGAGAGGATTCCAAACAACACACAGTGGGTCAC...CAAAAATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp GACTACATGGGCCTGCATACACATCTAATAGTAGAGGATATTTCTTGGATTTATTCACAGCTCCTGCCTTaGGATATGGAACCCGTACAG +
Preference number: 5 (lower is better)
Translates to: DYMGLHTHLIVEDISWIYSQLLP*DMEPVQ
Trigger: CTGTACGGGTTCCATATCCAAAGGCAGGAGCTGTGA...ATAAATCCAAGAAATATCCTCTACTATTAGATGTGTATGCAGGCCCATGTAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CTTGCCATCCCTTTAAAGAAGAGAACAACATTTGAACCAGTCCAGTTAGAAAAATCACAGCTCCTGCCTTaGGATATGGAACCCGTACAG +
Preference number: 5 (lower is better)
Translates to: LAIPLKKRTTFEPVQLEKSQLLP*DMEPVQ
Trigger: CTGTACGGGTTCCATATCCAAAGGCAGGAGCTGTGA...TTTTTCTAACTGGACTGGTTCAAATGTTGTTCTCTTCTTTAAAGGGATGGCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CAGTGTCTGCTTTTTGACTACATGGGCCTGCATACACATCTAATAGTAGAGGATCAAAGAACTTTACAGTaGGATTCACAGCTCCTGCCT +
Preference number: 5 (lower is better)
Translates to: QCLLFDYMGLHTHLIVEDQRTLQ*DSQLLP
Trigger: AGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTTG...ATCCTCTACTATTAGATGTGTATGCAGGCCCATGTAGTCAAAAAGCAGACACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CAGTGTCTGCTTTTTGACTACATGGGCCTGCATACACATCTAATAGTAGAGGATAGCAGGAGCAGTGATTaGTATGGAAGTTGCATTGGT +
Preference number: 5 (lower is better)
Translates to: QCLLFDYMGLHTHLIVEDSRSSD*YGSCIG
Trigger: ACCAATGCAACTTCCATACAAATCACTGCTCCTGCT...ATCCTCTACTATTAGATGTGTATGCAGGCCCATGTAGTCAAAAAGCAGACACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CAGTGTCTGCTTTTTGACTACATGGGCCTGCATACACATCTAATAGTAGAGGATATGAAGTCCAGTTTTTaGGAGGGCATCTGGACATTC +
Preference number: 5 (lower is better)
Translates to: QCLLFDYMGLHTHLIVEDMKSSF*EGIWTF
Trigger: GAATGTCCAGATGCCCTCCAAAAAACTGGACTTCAT...ATCCTCTACTATTAGATGTGTATGCAGGCCCATGTAGTCAAAAAGCAGACACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp GACATAATACGTAGAAATATCCTCTGCATAGACAACAACAGCTCTAGCCATTCCGACAGTGTCTGCTTTTaGACTACATGGGCCTGCATA +
Preference number: 5 (lower is better)
Translates to: DIIRRNILCIDNNSSSHSDSVCF*TTWACI
Trigger: TATGCAGGCCCATGTAGTCAAAAAGCAGACACTGTC...GGAATGGCTAGAGCTGTTGTTGTCTATGCAGAGGATATTTCTACGTATTATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR CAA 90 bp TTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACTGCTGTGGTTTTGACAGTGTCTGCTTTTaGACTACATGGGCCTGCATA +
Preference number: 5 (lower is better)
Translates to: LLAVSLTFLWSLFNCCGFDSVCF*TTWACI
Trigger: TATGCAGGCCCATGTAGTCAAAAAGCAGACACTGTC...AAAACCACAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp AAAACACCCAATCCATTTCCAAATTTGACTCAAAGGGCGCTTACACAGCATGCAATGACCAGCCCCAAATaGCAATTCGTTTGTTGTCCA +
Preference number: 5 (lower is better)
Translates to: KTPNPFPNLTQRALTQHAMTSPK*QFVCCP
Trigger: TGGACAACAAACGAATTGCAATTTGGGGCTGGTCAT...TGCATGCTGTGTAAGCGCCCTTTGAGTCAAATTTGGAAATGGATTGGGTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR CAA 90 bp TTTCATCTTTTAACAGGGCAAGCTGATGTGTTCACATCTCAGTTTCAAGCTGCCATGACCAGCCCCAAATaGCAATTCGTTTGTTGTCCA +
Preference number: 5 (lower is better)
Translates to: FHLLTGQADVFTSQFQAAMTSPK*QFVCCP
Trigger: TGGACAACAAACGAATTGCAATTTGGGGCTGGTCAT...GGCAGCTTGAAACTGAGATGTGAACACATCAGCTTGCCCTGTTAAAAGATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TTGAAAATTGTCTGGCTGCTTCAATTTGATCTTCAACTTCAAATGTTCCCAGTCACGGCTATTCCACACTaGAACACGCCACTTCCCGAT +
Preference number: 5 (lower is better)
Translates to: LKIVWLLQFDLQLQMFPVTAIPH*NTPLPD
Trigger: ATCGGGAAGTGGCGTGTTCAAGTGTGGAATAGCCGT...GACTGGGAACATTTGAAGTTGAAGATCAAATTGAAGCAGCCAGACAATTTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TATTTTCATCTTTTAACAGGGCAAGCTGATGTGTTCACATCTCAGTTTCAAGCTACGGCTATTCCACACTaGAACACGCCACTTCCCGAT +
Preference number: 5 (lower is better)
Translates to: YFHLLTGQADVFTSQFQATAIPH*NTPLPD
Trigger: ATCGGGAAGTGGCGTGTTCAAGTGTGGAATAGCCGT...AGCTTGAAACTGAGATGTGAACACATCAGCTTGCCCTGTTAAAAGATGAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CTCATCAGAGTAGAAGGAGTATTCAATAAGTGGGACTTCTGTGTCGTTAAATTGGGTTGTCTTCTGGAGTaGGGAGACCCATGTAACGTT +
Preference number: 5 (lower is better)
Translates to: LIRVEGVFNKWDFCVVKLGCLLE*GDPCNV
Trigger: AACGTTACATGGGTCTCCCAACTCCAGAAGACAACC...CAATTTAACGACACAGAAGTCCCACTTATTGAATACTCCTTCTACTCTGATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TTTACAACAAAGAACTTTACAGTTGGATTCACAGCTCCTGCCTTTGGATATGGAGGTTGTCTTCTGGAGTaGGGAGACCCATGTAACGTT +
Preference number: 5 (lower is better)
Translates to: FTTKNFTVGFTAPAFGYGGCLLE*GDPCNV
Trigger: AACGTTACATGGGTCTCCCAACTCCAGAAGACAACC...TCCATATCCAAAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTTGTTGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TTGGTGACTGAGCTGAGAGAGTCTGTATTTACAACAAAGAACTTTACAGTTGGAGGTTGTCTTCTGGAGTaGGGAGACCCATGTAACGTT +
Preference number: 5 (lower is better)
Translates to: LVTELRESVFTTKNFTVGGCLLE*GDPCNV
Trigger: AACGTTACATGGGTCTCCCAACTCCAGAAGACAACC...TCCAACTGTAAAGTTCTTTGTTGTAAATACAGACTCTCTCAGCTCAGTCACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR CAA 90 bp AGGGAATCTATGCAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAGAGTAGCCTGCTCGTGTaGGTATGCTTGGACTTGGGT +
Preference number: 5 (lower is better)
Translates to: RESMQSLHKNNSYLLFQQSSLLV*VCLDLG
Trigger: ACCCAAGTCCAAGCATACCAACACGAGCAGGCTACT...CTGCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTGCATAGATTCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAGCTGATGCAGAAAAGTAGCCTGCTCGTGTaGGTATGCTTGGACTTGGGT +
Preference number: 5 (lower is better)
Translates to: QSLHKNNSYLLFQQLMQKSSLLV*VCLDLG
Trigger: ACCCAAGTCCAAGCATACCAACACGAGCAGGCTACT...TTTCTGCATCAGCTGCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TTCGTTCAAGCCAGAAAGTCAGGTTTGAATATAGATTCGTACTTGGTCATTTTCGTAGCATCATTGCCTTaGTTCAGCAGAACCACGGGC +
Preference number: 5 (lower is better)
Translates to: FVQARKSGLNIDSYLVIFVASLP*FSRTTG
Trigger: GCCCGTGGTTCTGCTGAACAAAGGCAATGATGCTAC...GAAAATGACCAAGTACGAATCTATATTCAAACCTGACTTTCTGGCTTGAACGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434918.6
CDS-3UTR CAA 90 bp CATACCAGACAGAAATGGATTTTCATATTTGAGCTGAGCTATTATCATGCTGGTCAGGAGAGCAGTGTCTaGATACTCCCAGCATATGCG +
Preference number: 5 (lower is better)
Translates to: HTRQKWIFIFELSYYHAGQESSV*ILPAYA
Trigger: CGCATATGCTGGGAGTATCAAGACACTGCTCTCCTG...ACCAGCATGATAATAGCTCAGCTCAAATATGAAAATCCATTTCTGTCTGGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR CAA 90 bp GGCGCTTACACAGCATGCATGGGAAGGAATGATTATCCCATTAAGCCCACTTGTGAACTCACTGTGAATTaGGCTTTATTGAATAGTGCT +
Preference number: 5 (lower is better)
Translates to: GAYTACMGRNDYPIKPTCELTVN*ALLNSA
Trigger: AGCACTATTCAATAAAGCCAAATTCACAGTGAGTTC...ACAAGTGGGCTTAATGGGATAATCATTCCTTCCCATGCATGCTGTGTAAGCGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS TCA 90 bp ATGTCATTGTTCCAAACATATGCTAACCAATTTATGACCCACTGGTaGCCATGTGACCCACTGTGTGTTGTTTGGAATCCTCTCTTCTGT +
Preference number: 5 (lower is better)
Translates to: MSLFQTYANQFMTHW*PCDPLCVVWNPLFC
Trigger: ACAGAAGAGAGGATTCCAAACAACACACAGTGGGTCACATGGTCACCAGTGGGTCATAAATTGGTTAGCATATGTTTGGAACAATGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434918.6
CDS GCA 90 bp TATCCAACAGGAAAAGCAGCAACAATATTCTACAGTGGCTTAACATaGGTGACTCAAACCACGAGCTCAGGATTTATCAAGTCTTCAGCT +
Preference number: 5 (lower is better)
Translates to: YPTGKAATIFYSGLT*VTQTTSSGFIKSSA
Trigger: AGCTGAAGACTTGATAAATCCTGAGCTCGTGGTTTGAGTCACGCATGTTAAGCCACTGTAGAATATTGTTGCTGCTTTTCCTGTTGGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677015.1
ENST00000678583.1
CDS CCA 90 bp CATCCATCCATCCTCTGCTTATCTATTAGTTTATTCTACAAATATTaGTTGGGCATATGCTATGTCGCAGGCACCCTACTACACACTGGA +
Preference number: 5 (lower is better)
Translates to: HPSILCLSISLFYKY*LGICYVAGTLLHTG
Trigger: TCCAGTGTGTAGTAGGGTGCCTGCGACATAGCATATGCCCAACCAATATTTGTAGAATAAACTAATAGATAAGCAGAGGATGGATGGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS-3UTR CAA 90 bp CTCATCAGAGTAGAAGGAGTATTCAATAAGTGGGACTTCTGTGTCGTTAAATTGGTGACCCACTGTGTGTaGTTTGGAATCCTCTCTTCT +
Preference number: 5 (lower is better)
Translates to: LIRVEGVFNKWDFCVVKLVTHCV*FGILSS
Trigger: AGAAGAGAGGATTCCAAACAACACACAGTGGGTCAC...CAATTTAACGACACAGAAGTCCCACTTATTGAATACTCCTTCTACTCTGATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR CAA 90 bp AGGGAATCTATGCAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAGGAACCCGTACAGTCTTaGGGTACTGCAGTGACTCAT +
Preference number: 5 (lower is better)
Translates to: RESMQSLHKNNSYLLFQQEPVQS*GTAVTH
Trigger: ATGAGTCACTGCAGTACCCAAAGACTGTACGGGTTC...CTGCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTGCATAGATTCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TACATGGGCCTGCATACACATCTAATAGTAGAGGATATTTCTTGGATTTATCAATCACAGCTCCTGCCTTaGGATATGGAACCCGTACAG +
Preference number: 5 (lower is better)
Translates to: YMGLHTHLIVEDISWIYQSQLLP*DMEPVQ
Trigger: CTGTACGGGTTCCATATCCAAAGGCAGGAGCTGTGA...TTGATAAATCCAAGAAATATCCTCTACTATTAGATGTGTATGCAGGCCCATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp ATTTACAATGCTTTCCCATCACCCTTGCTGTGTTTTTGTAGCACCTATAGCCATAGCAGGAGCAGTGATTaGTATGGAAGTTGCATTGGT +
Preference number: 5 (lower is better)
Translates to: IYNAFPSPLLCFCSTYSHSRSSD*YGSCIG
Trigger: ACCAATGCAACTTCCATACAAATCACTGCTCCTGCT...ATGGCTATAGGTGCTACAAAAACACAGCAAGGGTGATGGGAAAGCATTGTAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CTGGTTAGAGCTTCTATCCCGATGACTTCCCAGGTGCCTTTTGTAATAAATGTGAAATTCTTTCTTGTGTaGCCCATGTCACATCACACA +
Preference number: 5 (lower is better)
Translates to: LVRASIPMTSQVPFVINVKFFLV*PMSHHT
Trigger: TGTGTGATGTGACATGGGCAACACAAGAAAGAATTT...CACATTTATTACAAAAGGCACCTGGGAAGTCATCGGGATAGAAGCTCTAACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CCTCCATATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTCAAAGAAATTCTTTCTaGTGTTGCCCATGTCACATC +
Preference number: 5 (lower is better)
Translates to: PPYDQPQIAIRLLSTNPIQRNSF*CCPCHI
Trigger: GATGTGACATGGGCAACACAAGAAAGAATTTCTTTG...AATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATATGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp ATTTACAATGCTTTCCCATCACCCTTGCTGTGTTTTTGTAGCACCTATAGCCATTTATCCAAAGCTGAATaGTCTTCCAGGACTCTCAGC +
Preference number: 5 (lower is better)
Translates to: IYNAFPSPLLCFCSTYSHLSKAE*SSRTLS
Trigger: GCTGAGAGTCCTGGAAGACAATTCAGCTTTGGATAA...ATGGCTATAGGTGCTACAAAAACACAGCAAGGGTGATGGGAAAGCATTGTAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACTGCTGTGGTTTTTTATCCAAAGCTGAATaGTCTTCCAGGACTCTCAGC +
Preference number: 5 (lower is better)
Translates to: LLAVSLTFLWSLFNCCGFLSKAE*SSRTLS
Trigger: GCTGAGAGTCCTGGAAGACAATTCAGCTTTGGATAA...AAAACCACAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CATATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGATGAAGTCCAGTTTTTaGGAGGGCATCTGGACATTC +
Preference number: 5 (lower is better)
Translates to: HMTSPKLQFVCCPQIPFLMKSSF*EGIWTF
Trigger: GAATGTCCAGATGCCCTCCAAAAAACTGGACTTCAT...CAAAAATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp ATTTACAATGCTTTCCCATCACCCTTGCTGTGTTTTTGTAGCACCTATAGCCATATGAAGTCCAGTTTTTaGGAGGGCATCTGGACATTC +
Preference number: 5 (lower is better)
Translates to: IYNAFPSPLLCFCSTYSHMKSSF*EGIWTF
Trigger: GAATGTCCAGATGCCCTCCAAAAAACTGGACTTCAT...ATGGCTATAGGTGCTACAAAAACACAGCAAGGGTGATGGGAAAGCATTGTAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TTTACAACAAAGAACTTTACAGTTGGATTCACAGCTCCTGCCTTTGGATATGGAGACAGTGTCTGCTTTTaGACTACATGGGCCTGCATA +
Preference number: 5 (lower is better)
Translates to: FTTKNFTVGFTAPAFGYGDSVCF*TTWACI
Trigger: TATGCAGGCCCATGTAGTCAAAAAGCAGACACTGTC...TCCATATCCAAAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTTGTTGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CAGGAGAGCAGTGTCTTGATACTCCCAGCATATGCGATATTGTGCTTCTTAACCTCTGGCTGCTTCAATTaGATCTTCAACTTCAAATGT +
Preference number: 5 (lower is better)
Translates to: QESSVLILPAYAILCFLTSGCFN*IFNFKC
Trigger: ACATTTGAAGTTGAAGATCAAATTGAAGCAGCCAGA...GGTTAAGAAGCACAATATCGCATATGCTGGGAGTATCAAGACACTGCTCTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR CAA 90 bp CAGGAGAGCAGTGTCTTGATACTCCCAGCATATGCGATATTGTGCTTCTTAACCCAAATTGCAATTCGTTaGTTGTCCACAAATCCCATT +
Preference number: 5 (lower is better)
Translates to: QESSVLILPAYAILCFLTQIAIR*LSTNPI
Trigger: AATGGGATTTGTGGACAACAAACGAATTGCAATTTG...GGTTAAGAAGCACAATATCGCATATGCTGGGAGTATCAAGACACTGCTCTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR CAA 90 bp CAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAGCTGATGCAGAAAGGTTGTCTTCTGGAGTaGGGAGACCCATGTAACGTT +
Preference number: 5 (lower is better)
Translates to: QSLHKNNSYLLFQQLMQKGCLLE*GDPCNV
Trigger: AACGTTACATGGGTCTCCCAACTCCAGAAGACAACC...TTTCTGCATCAGCTGCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp ATTTACAATGCTTTCCCATCACCCTTGCTGTGTTTTTGTAGCACCTATAGCCATCATCAGTATACCACATaGCCTGGAAATCCACTCCAA +
Preference number: 5 (lower is better)
Translates to: IYNAFPSPLLCFCSTYSHHQYTT*PGNPLQ
Trigger: TTGGAGTGGATTTCCAGGCAATGTGGTATACTGATG...ATGGCTATAGGTGCTACAAAAACACAGCAAGGGTGATGGGAAAGCATTGTAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CATATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGCATCAGTATACCACATaGCCTGGAAATCCACTCCAA +
Preference number: 5 (lower is better)
Translates to: HMTSPKLQFVCCPQIPFLHQYTT*PGNPLQ
Trigger: TTGGAGTGGATTTCCAGGCAATGTGGTATACTGATG...CAAAAATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CTGCTAGCTATTCCATGGTCTTCATCAGTATACCACATTGCCTGGAAATCCACTAACAATTCCTATTTGTaGTTTCAGCAGCTGATGCAG +
Preference number: 5 (lower is better)
Translates to: LLAIPWSSSVYHIAWKSTNNSYL*FQQLMQ
Trigger: CTGCATCAGCTGCTGAAACAACAAATAGGAATTGTT...AGTGGATTTCCAGGCAATGTGGTATACTGATGAAGACCATGGAATAGCTAGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TCAGGGAATCTATGCAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCGCTTTCCCATCACCCTaGCTGTGTTTTTGTAGCACC +
Preference number: 5 (lower is better)
Translates to: SGNLCKASIKTIPICCFSAFPSP*LCFCST
Trigger: GGTGCTACAAAAACACAGCAAGGGTGATGGGAAAGC...GCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTGCATAGATTCCCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGAAAATTGTCTGGCTGCTTGCTTTCCCATCACCCTaGCTGTGTTTTTGTAGCACC +
Preference number: 5 (lower is better)
Translates to: LQFVCCPQIPFLKIVWLLAFPSP*LCFCST
Trigger: GGTGCTACAAAAACACAGCAAGGGTGATGGGAAAGC...AAGCAGCCAGACAATTTTCAAAAATGGGATTTGTGGACAACAAACGAATTGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CATATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGTTGCCTCTGGAACCATaGATCATTCCCTACTCAACT +
Preference number: 5 (lower is better)
Translates to: HMTSPKLQFVCCPQIPFLLPLEP*IIPYST
Trigger: AGTTGAGTAGGGAATGATCAATGGTTCCAGAGGCAA...CAAAAATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416189.6
CDS-3UTR CAA 90 bp TTTACAACAAAGAACTTTACAGTTGGATTCACAGCTCCTGCCTTTGGATATGGATCAGCTGTAGCATCATaGCCTTTGTTCAGCAGAACC +
Preference number: 5 (lower is better)
Translates to: FTTKNFTVGFTAPAFGYGSAVAS*PLFSRT
Trigger: GGTTCTGCTGAACAAAGGCAATGATGCTACAGCTGA...TCCATATCCAAAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTTGTTGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434918.6
ENST00000676624.1
CDS-3UTR CAA 90 bp CAATCACATGAACAGGAGAGCAGTGTCTTGATACTCCCAGCATATGCGATATTGAATCCATTTCCAAATTaGACTCAAAGGGCGCTTACA +
Preference number: 5 (lower is better)
Translates to: QSHEQESSVLILPAYAILNPFPN*TQRALT
Trigger: TGTAAGCGCCCTTTGAGTCAAATTTGGAAATGGATT...CAATATCGCATATGCTGGGAGTATCAAGACACTGCTCTCCTGTTCATGTGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS CCA 90 bp CATCCATCCTCTGCTTATCTATTAGTTTATTCTACAAATATTGGTTaGGCATATGCTATGTCGCAGGCACCCTACTACACACTGGAGATA +
Preference number: 5 (lower is better)
Translates to: HPSSAYLLVYSTNIG*AYAMSQAPYYTLEI
Trigger: TATCTCCAGTGTGTAGTAGGGTGCCTGCGACATAGCATATGCCCAACCAATATTTGTAGAATAAACTAATAGATAAGCAGAGGATGGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS-3UTR CAA 90 bp CTTGCCATCCCTTTAAAGAAGAGAACAACATTTGAACCAGTCCAGTTAGAAAAAGTGACCCACTGTGTGTaGTTTGGAATCCTCTCTTCT +
Preference number: 5 (lower is better)
Translates to: LAIPLKKRTTFEPVQLEKVTHCV*FGILSS
Trigger: AGAAGAGAGGATTCCAAACAACACACAGTGGGTCAC...TTTTTCTAACTGGACTGGTTCAAATGTTGTTCTCTTCTTTAAAGGGATGGCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TTTACAACAAAGAACTTTACAGTTGGATTCACAGCTCCTGCCTTTGGATATGGACAAAGAACTTTACAGTaGGATTCACAGCTCCTGCCT +
Preference number: 5 (lower is better)
Translates to: FTTKNFTVGFTAPAFGYGQRTLQ*DSQLLP
Trigger: AGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTTG...TCCATATCCAAAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTTGTTGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TTACAACAAAGAACTTTACAGTTGGATTCACAGCTCCTGCCTTTGGATATGGAACAAAGAACTTTACAGTaGGATTCACAGCTCCTGCCT +
Preference number: 5 (lower is better)
Translates to: LQQRTLQLDSQLLPLDMEQRTLQ*DSQLLP
Trigger: AGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTTG...TTCCATATCCAAAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTTGTTGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TTTCATCTTTTAACAGGGCAAGCTGATGTGTTCACATCTCAGTTTCAAGCTGCCAAATTCTTTCTTGTGTaGCCCATGTCACATCACACA +
Preference number: 5 (lower is better)
Translates to: FHLLTGQADVFTSQFQAAKFFLV*PMSHHT
Trigger: TGTGTGATGTGACATGGGCAACACAAGAAAGAATTT...GGCAGCTTGAAACTGAGATGTGAACACATCAGCTTGCCCTGTTAAAAGATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CTCATCAGAGTAGAAGGAGTATTCAATAAGTGGGACTTCTGTGTCGTTAAATTGTTATCCAAAGCTGAATaGTCTTCCAGGACTCTCAGC +
Preference number: 5 (lower is better)
Translates to: LIRVEGVFNKWDFCVVKLLSKAE*SSRTLS
Trigger: GCTGAGAGTCCTGGAAGACAATTCAGCTTTGGATAA...CAATTTAACGACACAGAAGTCCCACTTATTGAATACTCCTTCTACTCTGATGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGAAATGAAGTCCAGTTTTTaGGAGGGCATCTGGACATTC +
Preference number: 5 (lower is better)
Translates to: YDQPQIAIRLLSTNPIFEMKSSF*EGIWTF
Trigger: GAATGTCCAGATGCCCTCCAAAAAACTGGACTTCAT...TTCAAAAATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CTTGCCATCCCTTTAAAGAAGAGAACAACATTTGAACCAGTCCAGTTAGAAAAAGACAGTGTCTGCTTTTaGACTACATGGGCCTGCATA +
Preference number: 5 (lower is better)
Translates to: LAIPLKKRTTFEPVQLEKDSVCF*TTWACI
Trigger: TATGCAGGCCCATGTAGTCAAAAAGCAGACACTGTC...TTTTTCTAACTGGACTGGTTCAAATGTTGTTCTCTTCTTTAAAGGGATGGCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAGCTGATGCAGAAAGACAGTGTCTGCTTTTaGACTACATGGGCCTGCATA +
Preference number: 5 (lower is better)
Translates to: QSLHKNNSYLLFQQLMQKDSVCF*TTWACI
Trigger: TATGCAGGCCCATGTAGTCAAAAAGCAGACACTGTC...TTTCTGCATCAGCTGCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp GACTACATGGGCCTGCATACACATCTAATAGTAGAGGATATTTCTTGGATTTATCATGATCTTATCTCCTaGGTAACCACTTCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: DYMGLHTHLIVEDISWIYHDLIS*VTTSSA
Trigger: GGCAGAGGAAGTGGTTACCAAGGAGATAAGATCATG...ATAAATCCAAGAAATATCCTCTACTATTAGATGTGTATGCAGGCCCATGTAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAGCTGATGCAGAAACATGATCTTATCTCCTaGGTAACCACTTCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: QSLHKNNSYLLFQQLMQKHDLIS*VTTSSA
Trigger: GGCAGAGGAAGTGGTTACCAAGGAGATAAGATCATG...TTTCTGCATCAGCTGCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TTGAAAATTGTCTGGCTGCTTCAATTTGATCTTCAACTTCAAATGTTCCCAGTCCATGATCTTATCTCCTaGGTAACCACTTCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: LKIVWLLQFDLQLQMFPVHDLIS*VTTSSA
Trigger: GGCAGAGGAAGTGGTTACCAAGGAGATAAGATCATG...GACTGGGAACATTTGAAGTTGAAGATCAAATTGAAGCAGCCAGACAATTTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CCTCCATATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTTCTGGCTGCTTCAATTaGATCTTCAACTTCAAATGT +
Preference number: 5 (lower is better)
Translates to: PPYDQPQIAIRLLSTNPISGCFN*IFNFKC
Trigger: ACATTTGAAGTTGAAGATCAAATTGAAGCAGCCAGA...AATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATATGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CTCATCAGAGTAGAAGGAGTATTCAATAAGTGGGACTTCTGTGTCGTTAAATTGATGACCAGCCCCAAATaGCAATTCGTTTGTTGTCCA +
Preference number: 5 (lower is better)
Translates to: LIRVEGVFNKWDFCVVKLMTSPK*QFVCCP
Trigger: TGGACAACAAACGAATTGCAATTTGGGGCTGGTCAT...CAATTTAACGACACAGAAGTCCCACTTATTGAATACTCCTTCTACTCTGATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR CAA 90 bp AACTTCAAATGTTCCCAGTCTTCTGTTGATTGCATGCATGATCTTATCTCCTTGCATCAGTATACCACATaGCCTGGAAATCCACTCCAA +
Preference number: 5 (lower is better)
Translates to: NFKCSQSSVDCMHDLISLHQYTT*PGNPLQ
Trigger: TTGGAGTGGATTTCCAGGCAATGTGGTATACTGATG...CAAGGAGATAAGATCATGCATGCAATCAACAGAAGACTGGGAACATTTGAAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434918.6
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TTGAAAATTGTCTGGCTGCTTCAATTTGATCTTCAACTTCAAATGTTCCCAGTCTCAGCTGTAGCATCATaGCCTTTGTTCAGCAGAACC +
Preference number: 5 (lower is better)
Translates to: LKIVWLLQFDLQLQMFPVSAVAS*PLFSRT
Trigger: GGTTCTGCTGAACAAAGGCAATGATGCTACAGCTGA...GACTGGGAACATTTGAAGTTGAAGATCAAATTGAAGCAGCCAGACAATTTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434918.6
ENST00000676624.1
CDS-3UTR CAA 90 bp AAAACACCCAATCCATTTCCAAATTTGACTCAAAGGGCGCTTACACAGCATGCAAGTTTTTCTATACCATaGCCTGGAAATCCACTCCAA +
Preference number: 5 (lower is better)
Translates to: KTPNPFPNLTQRALTQHASFSIP*PGNPLQ
Trigger: TTGGAGTGGATTTCCAGGCAATGGTATAGAAAAACT...TGCATGCTGTGTAAGCGCCCTTTGAGTCAAATTTGGAAATGGATTGGGTGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS GCA 90 bp ACATTGTTTTATGAAGTGGCTCATGTGGGTATATATATGTTGGTGTaGTGTGCTGCTAGCTATTCCATGGTCTTCATCAGTATACCACTA +
Preference number: 5 (lower is better)
Translates to: TLFYEVAHVGIYMLV*CAASYSMVFISIPL
Trigger: TAGTGGTATACTGATGAAGACCATGGAATAGCTAGCAGCACAGCACACCAACATATATATACCCACATGAGCCACTTCATAAAACAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677015.1
ENST00000677212.1
ENST00000678522.1
CDS-3UTR CAA 90 bp CAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAGCTGATGCAGAAACAAAGAACTTTACAGTaGGATTCACAGCTCCTGCCT +
Preference number: 5 (lower is better)
Translates to: QSLHKNNSYLLFQQLMQKQRTLQ*DSQLLP
Trigger: AGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTTG...TTTCTGCATCAGCTGCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CATACCAGACAGAAATGGATTTTCATATTTGAGCTGAGCTATTATCATGCTGGTAGCAGGAGCAGTGATTaGTATGGAAGTTGCATTGGT +
Preference number: 5 (lower is better)
Translates to: HTRQKWIFIFELSYYHAGSRSSD*YGSCIG
Trigger: ACCAATGCAACTTCCATACAAATCACTGCTCCTGCT...ACCAGCATGATAATAGCTCAGCTCAAATATGAAAATCCATTTCTGTCTGGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR CAA 90 bp AGGGAATCTATGCAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAGAGCAGGAGCAGTGATTaGTATGGAAGTTGCATTGGT +
Preference number: 5 (lower is better)
Translates to: RESMQSLHKNNSYLLFQQSRSSD*YGSCIG
Trigger: ACCAATGCAACTTCCATACAAATCACTGCTCCTGCT...CTGCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTGCATAGATTCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TCTAATAGCTTGTTCGTTCAAGCCAGAAAGTCAGGTTTGAATATAGATTCGTACATGAAGTCCAGTTTTTaGGAGGGCATCTGGACATTC +
Preference number: 5 (lower is better)
Translates to: SNSLFVQARKSGLNIDSYMKSSF*EGIWTF
Trigger: GAATGTCCAGATGCCCTCCAAAAAACTGGACTTCAT...GTACGAATCTATATTCAAACCTGACTTTCTGGCTTGAACGAACAAGCTATTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434918.6
ENST00000678566.1
CDS-3UTR CAA 90 bp GACTACATGGGCCTGCATACACATCTAATAGTAGAGGATATTTCTTGGATTTATATGAAGTCCAGTTTTTaGGAGGGCATCTGGACATTC +
Preference number: 5 (lower is better)
Translates to: DYMGLHTHLIVEDISWIYMKSSF*EGIWTF
Trigger: GAATGTCCAGATGCCCTCCAAAAAACTGGACTTCAT...ATAAATCCAAGAAATATCCTCTACTATTAGATGTGTATGCAGGCCCATGTAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CTTGCCATCCCTTTAAAGAAGAGAACAACATTTGAACCAGTCCAGTTAGAAAAAATGAAGTCCAGTTTTTaGGAGGGCATCTGGACATTC +
Preference number: 5 (lower is better)
Translates to: LAIPLKKRTTFEPVQLEKMKSSF*EGIWTF
Trigger: GAATGTCCAGATGCCCTCCAAAAAACTGGACTTCAT...TTTTTCTAACTGGACTGGTTCAAATGTTGTTCTCTTCTTTAAAGGGATGGCAAG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TTTCATCTTTTAACAGGGCAAGCTGATGTGTTCACATCTCAGTTTCAAGCTGCCTCTGGCTGCTTCAATTaGATCTTCAACTTCAAATGT +
Preference number: 5 (lower is better)
Translates to: FHLLTGQADVFTSQFQAASGCFN*IFNFKC
Trigger: ACATTTGAAGTTGAAGATCAAATTGAAGCAGCCAGA...GGCAGCTTGAAACTGAGATGTGAACACATCAGCTTGCCCTGTTAAAAGATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TCAGGGAATCTATGCAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCATGACCAGCCCCAAATaGCAATTCGTTTGTTGTCCA +
Preference number: 5 (lower is better)
Translates to: SGNLCKASIKTIPICCFSMTSPK*QFVCCP
Trigger: TGGACAACAAACGAATTGCAATTTGGGGCTGGTCAT...GCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTGCATAGATTCCCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CTTGCCATCCCTTTAAAGAAGAGAACAACATTTGAACCAGTCCAGTTAGAAAAACATCAGTATACCACATaGCCTGGAAATCCACTCCAA +
Preference number: 5 (lower is better)
Translates to: LAIPLKKRTTFEPVQLEKHQYTT*PGNPLQ
Trigger: TTGGAGTGGATTTCCAGGCAATGTGGTATACTGATG...TTTTTCTAACTGGACTGGTTCAAATGTTGTTCTCTTCTTTAAAGGGATGGCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp AATATCCATGACCGAATAGTTCTGAATCCTCCTGAGCCACTGCAAAGAAATTCTTTCCCTTACATTTCTTaGGAGTCTTTTCAACTGCTG +
Preference number: 5 (lower is better)
Translates to: NIHDRIVLNPPEPLQRNSFPYIS*ESFQLL
Trigger: CAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAA...AGAATTTCTTTGCAGTGGCTCAGGAGGATTCAGAACTATTCGGTCATGGATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp ATTTACAATGCTTTCCCATCACCCTTGCTGTGTTTTTGTAGCACCTATAGCCATTTCCCTTACATTTCTTaGGAGTCTTTTCAACTGCTG +
Preference number: 5 (lower is better)
Translates to: IYNAFPSPLLCFCSTYSHFPYIS*ESFQLL
Trigger: CAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAA...ATGGCTATAGGTGCTACAAAAACACAGCAAGGGTGATGGGAAAGCATTGTAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CATATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGTTCCCTTACATTTCTTaGGAGTCTTTTCAACTGCTG +
Preference number: 5 (lower is better)
Translates to: HMTSPKLQFVCCPQIPFLFPYIS*ESFQLL
Trigger: CAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAA...CAAAAATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CTCATCAGAGTAGAAGGAGTATTCAATAAGTGGGACTTCTGTGTCGTTAAATTGAAATTCTTTCTTGTGTaGCCCATGTCACATCACACA +
Preference number: 5 (lower is better)
Translates to: LIRVEGVFNKWDFCVVKLKFFLV*PMSHHT
Trigger: TGTGTGATGTGACATGGGCAACACAAGAAAGAATTT...CAATTTAACGACACAGAAGTCCCACTTATTGAATACTCCTTCTACTCTGATGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGAAAAATTCTTTCTTGTGTaGCCCATGTCACATCACACA +
Preference number: 5 (lower is better)
Translates to: YDQPQIAIRLLSTNPIFEKFFLV*PMSHHT
Trigger: TGTGTGATGTGACATGGGCAACACAAGAAAGAATTT...TTCAAAAATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TTGGTGACTGAGCTGAGAGAGTCTGTATTTACAACAAAGAACTTTACAGTTGGAAAATTCTTTCTTGTGTaGCCCATGTCACATCACACA +
Preference number: 5 (lower is better)
Translates to: LVTELRESVFTTKNFTVGKFFLV*PMSHHT
Trigger: TGTGTGATGTGACATGGGCAACACAAGAAAGAATTT...TCCAACTGTAAAGTTCTTTGTTGTAAATACAGACTCTCTCAGCTCAGTCACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TATGACCAGCCCCAAATTGCAATTCGTTTGTTGTCCACAAATCCCATTTTTGAACAAAGAAATTCTTTCTaGTGTTGCCCATGTCACATC +
Preference number: 5 (lower is better)
Translates to: YDQPQIAIRLLSTNPIFEQRNSF*CCPCHI
Trigger: GATGTGACATGGGCAACACAAGAAAGAATTTCTTTG...TTCAAAAATGGGATTTGTGGACAACAAACGAATTGCAATTTGGGGCTGGTCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp AACTTCAAATGTTCCCAGTCTTCTGTTGATTGCATGCATGATCTTATCTCCTTGCAAAGAAATTCTTTCTaGTGTTGCCCATGTCACATC +
Preference number: 5 (lower is better)
Translates to: NFKCSQSSVDCMHDLISLQRNSF*CCPCHI
Trigger: GATGTGACATGGGCAACACAAGAAAGAATTTCTTTG...CAAGGAGATAAGATCATGCATGCAATCAACAGAAGACTGGGAACATTTGAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp AGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACTGCTGTGGTTTTACTTAGAAATGAAGTCCAGTTTTTaGGAGGGCATCTGGACATTC +
Preference number: 5 (lower is better)
Translates to: SFPYISLESFQLLWFYLEMKSSF*EGIWTF
Trigger: GAATGTCCAGATGCCCTCCAAAAAACTGGACTTCAT...TTCTAAGTAAAACCACAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp AATATCCATGACCGAATAGTTCTGAATCCTCCTGAGCCACTGCAAAGAAATTCTTCTGGCTGCTTCAATTaGATCTTCAACTTCAAATGT +
Preference number: 5 (lower is better)
Translates to: NIHDRIVLNPPEPLQRNSSGCFN*IFNFKC
Trigger: ACATTTGAAGTTGAAGATCAAATTGAAGCAGCCAGA...AGAATTTCTTTGCAGTGGCTCAGGAGGATTCAGAACTATTCGGTCATGGATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp AGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACTGCTGTGGTTTTACTTAGAACATCAGTATACCACATaGCCTGGAAATCCACTCCAA +
Preference number: 5 (lower is better)
Translates to: SFPYISLESFQLLWFYLEHQYTT*PGNPLQ
Trigger: TTGGAGTGGATTTCCAGGCAATGTGGTATACTGATG...TTCTAAGTAAAACCACAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TTACAACAAAGAACTTTACAGTTGGATTCACAGCTCCTGCCTTTGGATATGGAATTCCCTTACATTTCTTaGGAGTCTTTTCAACTGCTG +
Preference number: 5 (lower is better)
Translates to: LQQRTLQLDSQLLPLDMEFPYIS*ESFQLL
Trigger: CAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAA...TTCCATATCCAAAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTTGTTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR CAA 90 bp CATAAATGTCATATGAAGCTGTGTAGGAATGCCTCCATTGCTTCACGTAGTTGTAGAGAAAGATCCACTTaGCCATATGAAATGTACTGT +
Preference number: 5 (lower is better)
Translates to: HKCHMKLCRNASIASRSCRERST*PYEMYC
Trigger: ACAGTACATTTCATATGGCAAAGTGGATCTTTCTCT...ACAACTACGTGAAGCAATGGAGGCATTCCTACACAGCTTCATATGACATTTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413651.3
ENST00000676479.1
ENST00000676624.1
CDS-3UTR CAA 90 bp TTGCTGGCAGTTTCCCTTACATTTCTTTGGAGTCTTTTCAACTGCTGTGGTTTTAGAGAAAGATCCACTTaGCCATATGAAATGTACTGT +
Preference number: 5 (lower is better)
Translates to: LLAVSLTFLWSLFNCCGFRERST*PYEMYC
Trigger: ACAGTACATTTCATATGGCAAAGTGGATCTTTCTCT...AAAACCACAGCAGTTGAAAAGACTCCAAAGAAATGTAAGGGAAACTGCCAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TCAGGGAATCTATGCAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCGCAGTATCTAATAGCTaGTTCGTTCAAGCCAGAAAG +
Preference number: 5 (lower is better)
Translates to: SGNLCKASIKTIPICCFSAVSNS*FVQARK
Trigger: CTTTCTGGCTTGAACGAACAAGCTATTAGATACTGC...GCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTGCATAGATTCCCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678566.1
CDS-3UTR CAA 90 bp GACATAATACGTAGAAATATCCTCTGCATAGACAACAACAGCTCTAGCCATTCCAACTCGCTAATATTATaGAGCATTACTCTGTGCATG +
Preference number: 5 (lower is better)
Translates to: DIIRRNILCIDNNSSSHSNSLIL*SITLCM
Trigger: CATGCACAGAGTAATGCTCAATAATATTAGCGAGTT...GGAATGGCTAGAGCTGTTGTTGTCTATGCAGAGGATATTTCTACGTATTATGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676768.1
CDS-3UTR CAA 90 bp TTGGTGACTGAGCTGAGAGAGTCTGTATTTACAACAAAGAACTTTACAGTTGGACAAATTGCAATTCGTTaGTTGTCCACAAATCCCATT +
Preference number: 5 (lower is better)
Translates to: LVTELRESVFTTKNFTVGQIAIR*LSTNPI
Trigger: AATGGGATTTGTGGACAACAAACGAATTGCAATTTG...TCCAACTGTAAAGTTCTTTGTTGTAAATACAGACTCTCTCAGCTCAGTCACCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TTTACAACAAAGAACTTTACAGTTGGATTCACAGCTCCTGCCTTTGGATATGGACAAATTGCAATTCGTTaGTTGTCCACAAATCCCATT +
Preference number: 5 (lower is better)
Translates to: FTTKNFTVGFTAPAFGYGQIAIR*LSTNPI
Trigger: AATGGGATTTGTGGACAACAAACGAATTGCAATTTG...TCCATATCCAAAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTTGTTGTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS-3UTR CAA 90 bp AACTTCAAATGTTCCCAGTCTTCTGTTGATTGCATGCATGATCTTATCTCCTTGCAAATTGCAATTCGTTaGTTGTCCACAAATCCCATT +
Preference number: 5 (lower is better)
Translates to: NFKCSQSSVDCMHDLISLQIAIR*LSTNPI
Trigger: AATGGGATTTGTGGACAACAAACGAATTGCAATTTG...CAAGGAGATAAGATCATGCATGCAATCAACAGAAGACTGGGAACATTTGAAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TCAGGGAATCTATGCAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCAACAATTCCTATTTGTaGTTTCAGCAGCTGATGCAG +
Preference number: 5 (lower is better)
Translates to: SGNLCKASIKTIPICCFSNNSYL*FQQLMQ
Trigger: CTGCATCAGCTGCTGAAACAACAAATAGGAATTGTT...GCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTGCATAGATTCCCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp AACTTCAAATGTTCCCAGTCTTCTGTTGATTGCATGCATGATCTTATCTCCTTGAGAGAAAGATCCACTTaGCCATATGAAATGTACTGT +
Preference number: 5 (lower is better)
Translates to: NFKCSQSSVDCMHDLISLRERST*PYEMYC
Trigger: ACAGTACATTTCATATGGCAAAGTGGATCTTTCTCT...CAAGGAGATAAGATCATGCATGCAATCAACAGAAGACTGGGAACATTTGAAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416189.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000679104.1
CDS GCA 90 bp CTTCTGATTTATAGTGAAGTGCATGGAATTCATTGTTTACTTTTCTaGTGGCCTCCCTCACATTATTGGCAATGGATAGTTTATGCTTTT +
Preference number: 5 (lower is better)
Translates to: LLIYSEVHGIHCLLF*WPPSHYWQWIVYAF
Trigger: AAAAGCATAAACTATCCATTGCCAATAATGTGAGGGAGGCCAGCAGAAAAGTAAACAATGAATTCCATGCACTTCACTATAAATCAGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS-3UTR CAA 90 bp TTGAAAATTGTCTGGCTGCTTCAATTTGATCTTCAACTTCAAATGTTCCCAGTCTCTGGCTGCTTCAATTaGATCTTCAACTTCAAATGT +
Preference number: 5 (lower is better)
Translates to: LKIVWLLQFDLQLQMFPVSGCFN*IFNFKC
Trigger: ACATTTGAAGTTGAAGATCAAATTGAAGCAGCCAGA...GACTGGGAACATTTGAAGTTGAAGATCAAATTGAAGCAGCCAGACAATTTTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416189.6
ENST00000434918.6
ENST00000494507.2
ENST00000676479.1
ENST00000676624.1
ENST00000678566.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TCAGGGAATCTATGCAAAGCCTCCATAAAAACAATTCCTATTTGTTGTTTCAGCTCTGGCTGCTTCAATTaGATCTTCAACTTCAAATGT +
Preference number: 5 (lower is better)
Translates to: SGNLCKASIKTIPICCFSSGCFN*IFNFKC
Trigger: ACATTTGAAGTTGAAGATCAAATTGAAGCAGCCAGA...GCTGAAACAACAAATAGGAATTGTTTTTATGGAGGCTTTGCATAGATTCCCTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS-3UTR CAA 90 bp TATTTTCATCTTTTAACAGGGCAAGCTGATGTGTTCACATCTCAGTTTCAAGCTCAAATTGCAATTCGTTaGTTGTCCACAAATCCCATT +
Preference number: 5 (lower is better)
Translates to: YFHLLTGQADVFTSQFQAQIAIR*LSTNPI
Trigger: AATGGGATTTGTGGACAACAAACGAATTGCAATTTG...AGCTTGAAACTGAGATGTGAACACATCAGCTTGCCCTGTTAAAAGATGAAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360534.8
ENST00000676479.1
ENST00000676624.1
ENST00000676810.1
ENST00000678566.1
ENST00000678668.1
ENST00000679104.1
CDS GCA 72 bp GGCAGAAGTCACCGCGGGCGGCGGAGACGCGCGTCCTaGACCGCTGCTCCGGGCGGTGGAGTCACTCGCCGC +
Preference number: 6 (lower is better)
Translates to: GRSHRGRRRRAS*TAAPGGGVTRR
Trigger: GCGGCGAGTGACTCCACCGCCCGGAGCAGCGGTGCAGGACGCGCGTCTCCGCCGCCCGCGGTGACTTCTGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360534.8
ENST00000434918.6
ENST00000676810.1
ENST00000678566.1
CDS GCA 72 bp TCACCGCGGGCGGCGGAGACGCGCGTCCTGCACCGCTaGTCCGGGCGGTGGAGTCACTCGCCGCTGGCAAGT +
Preference number: 6 (lower is better)
Translates to: SPRAAETRVLHR*SGRWSHSPLAS
Trigger: ACTTGCCAGCGGCGAGTGACTCCACCGCCCGGAGCAGCGGTGCAGGACGCGCGTCTCCGCCGCCCGCGGTGA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360534.8
ENST00000434918.6
ENST00000676810.1
ENST00000678566.1
CDS CCA 72 bp GCGGAGACGCGCGTCCTGCACCGCTGCTCCGGGCGGTaGAGTCACTCGCCGCTGGCAAGTTTCGGCCCCGAG +
Preference number: 6 (lower is better)
Translates to: AETRVLHRCSGR*SHSPLASFGPE
Trigger: CTCGGGGCCGAAACTTGCCAGCGGCGAGTGACTCCACCGCCCGGAGCAGCGGTGCAGGACGCGCGTCTCCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360534.8
ENST00000434918.6
ENST00000676810.1
ENST00000678566.1
CDS CCA 72 bp AGGGGAAAGGGCGCGCGGCCTCGGATGCGCAGACCCTaGGCCGGCGACTCGGGGACCCTGCTCCCTCTTAGC +
Preference number: 6 (lower is better)
Translates to: RGKGARPRMRRP*AGDSGTLLPLS
Trigger: GCTAAGAGGGAGCAGGGTCCCCGAGTCGCCGGCCCAGGGTCTGCGCATCCGAGGCCGCGCGCCCTTTCCCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676810.1
CDS CAA 72 bp GCTCTGGGACGTCCCTTCACCTGTCAGAGGGTGGCCTaGGGGCTTCCGCCTAAGGGGAGTCCCTGGTCCGGT +
Preference number: 6 (lower is better)
Translates to: ALGRPFTCQRVA*GLPPKGSPWSG
Trigger: ACCGGACCAGGGACTCCCCTTAGGCGGAAGCCCCAAGGCCACCCTCTGACAGGTGAAGGGACGTCCCAGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461836.6
CDS CAA 90 bp GGAGACCGCGGGCTGGGGGTGGGGGTGGCGTCTGGAGTGCGCCAGTaGGAGTTCTCTAAGGCGGGTGCCCTTGAACTTGTGCCTTCAGAG +
Preference number: 6 (lower is better)
Translates to: GDRGLGVGVASGVRQ*EFSKAGALELVPSE
Trigger: CTCTGAAGGCACAAGTTCAAGGGCACCCGCCTTAGAGAACTCCAACTGGCGCACTCCAGACGCCACCCCCACCCCCAGCCCGCGGTCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000461836.6
CDS CCA 72 bp CTCTGGGACGTCCCTTCACCTGTCAGAGGGTGGCCTTaGGGCTTCCGCCTAAGGGGAGTCCCTGGTCCGGTT +
Preference number: 6 (lower is better)
Translates to: LWDVPSPVRGWP*GFRLRGVPGPV
Trigger: AACCGGACCAGGGACTCCCCTTAGGCGGAAGCCCCAAGGCCACCCTCTGACAGGTGAAGGGACGTCCCAGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461836.6
CDS CCA 72 bp CTACCCCTGCCCGGGTTCGGGCGTGCGTTCTGTGAGTaGCTCTCCGGGACATTCAAAGCTCGACGCCAGGGT +
Preference number: 6 (lower is better)
Translates to: LPLPGFGRAFCE*LSGTFKARRQG
Trigger: ACCCTGGCGTCGAGCTTTGAATGTCCCGGAGAGCCACTCACAGAACGCACGCCCGAACCCGGGCAGGGGTAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461836.6
CDS CCA 72 bp GGCTGGGGGTGGGGGTGGCGTCTGGAGTGCGCCAGTTaGAGTTCTCTAAGGCGGGTGCCCTTGAACTTGTGC +
Preference number: 6 (lower is better)
Translates to: GWGWGWRLECAS*SSLRRVPLNLC
Trigger: GCACAAGTTCAAGGGCACCCGCCTTAGAGAACTCCAACTGGCGCACTCCAGACGCCACCCCCACCCCCAGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000461836.6
CDS CAA 72 bp GGGCTGGGGGTGGGGGTGGCGTCTGGAGTGCGCCAGTaGGAGTTCTCTAAGGCGGGTGCCCTTGAACTTGTG +
Preference number: 6 (lower is better)
Translates to: GLGVGVASGVRQ*EFSKAGALELV
Trigger: CACAAGTTCAAGGGCACCCGCCTTAGAGAACTCCAACTGGCGCACTCCAGACGCCACCCCCACCCCCAGCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000461836.6
CDS TCA 72 bp TTCTCTACCCCTGCCCGGGTTCGGGCGTGCGTTCTGTaGGTGGCTCTCCGGGACATTCAAAGCTCGACGCCA +
Preference number: 6 (lower is better)
Translates to: FSTPARVRACVL*VALRDIQSSTP
Trigger: TGGCGTCGAGCTTTGAATGTCCCGGAGAGCCACTCACAGAACGCACGCCCGAACCCGGGCAGGGGTAGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461836.6
CDS CCA 72 bp AGTCCCTGGTCCGGTTTCGCCAGCTTTTGGGCCATTTaGGGAGTTTGGCGAAGAGGTCCCCACAGCTCGCCC +
Preference number: 6 (lower is better)
Translates to: SPWSGFASFWAI*GVWRRGPHSSP
Trigger: GGGCGAGCTGTGGGGACCTCTTCGCCAAACTCCCCAAATGGCCCAAAAGCTGGCGAAACCGGACCAGGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461836.6
ENST00000676479.1
CDS CCA 72 bp GAAGAACCTTCCACGGTGTCTGTCAGAGGGTGGCCTTaGGGCTTCCGCCTAAGGGGAGTCCCTGGTCCGGTT +
Preference number: 6 (lower is better)
Translates to: EEPSTVSVRGWP*GFRLRGVPGPV
Trigger: AACCGGACCAGGGACTCCCCTTAGGCGGAAGCCCCAAGGCCACCCTCTGACAGACACCGTGGAAGGTTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676479.1
CDS CAA 72 bp AGAAGAACCTTCCACGGTGTCTGTCAGAGGGTGGCCTaGGGGCTTCCGCCTAAGGGGAGTCCCTGGTCCGGT +
Preference number: 6 (lower is better)
Translates to: RRTFHGVCQRVA*GLPPKGSPWSG
Trigger: ACCGGACCAGGGACTCCCCTTAGGCGGAAGCCCCAAGGCCACCCTCTGACAGACACCGTGGAAGGTTCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676479.1
CDS CCA 72 bp AGCAGAAGCCAGGGTCCGAAAGCTAAGCGAGAGCTCTaGGACGTCCCTTCACCTGTCAGAGGGTGGCCTTGG +
Preference number: 6 (lower is better)
Translates to: SRSQGPKAKREL*DVPSPVRGWPW
Trigger: CCAAGGCCACCCTCTGACAGGTGAAGGGACGTCCCAGAGCTCTCGCTTAGCTTTCGGACCCTGGCTTCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461836.6
CDS TCA 72 bp TCCACGGTGTCTTCATCGTCGGCGTCTCCTCGGAAGTaGGCGTTCAGAGAAGGAGCGCAGGCAGAAGTCACC +
Preference number: 6 (lower is better)
Translates to: STVSSSSASPRK*AFREGAQAEVT
Trigger: GGTGACTTCTGCCTGCGCTCCTTCTCTGAACGCTCACTTCCGAGGAGACGCCGACGATGAAGACACCGTGGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360534.8
ENST00000434918.6
ENST00000676768.1
ENST00000676810.1
ENST00000678566.1
CDS TCA 72 bp GGGCTTCCATGCTACCCTGCTGTAAGGCGCAGGTACTaGAACAGGACCGAACCCCTTCACTCAGCCGCAGAG +
Preference number: 6 (lower is better)
Translates to: GLPCYPAVRRRY*NRTEPLHSAAE
Trigger: CTCTGCGGCTGAGTGAAGGGGTTCGGTCCTGTTTCAGTACCTGCGCCTTACAGCAGGGTAGCATGGAAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS GCA 72 bp TGGCCTGGGTTACTCTCCATGACCCCAGGTGTACTCTaGACCCTGTGCATGCTCAGCAAGGCAGTTCACCCG +
Preference number: 6 (lower is better)
Translates to: WPGLLSMTPGVL*TLCMLSKAVHP
Trigger: CGGGTGAACTGCCTTGCTGAGCATGCACAGGGTGCAGAGTACACCTGGGGTCATGGAGAGTAACCCAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS CAA 90 bp CTAAGGCGGGTGCCCTTGAACTTGTGCCTTCAGAGCACATTAGCGTaGGTTTCTCTACCCCTGCCCGGGTTCGGGCGTGCGTTCTGTGAG +
Preference number: 6 (lower is better)
Translates to: LRRVPLNLCLQSTLA*VSLPLPGFGRAFCE
Trigger: CTCACAGAACGCACGCCCGAACCCGGGCAGGGGTAGAGAAACCAACGCTAATGTGCTCTGAAGGCACAAGTTCAAGGGCACCCGCCTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461836.6
CDS TCA 72 bp CAGGAGAGGAATGGGTGGGATGAGATGAAGCAGATCTaGGGGCTGCAGCACCCGTACACCCGCACAGTCGTA +
Preference number: 6 (lower is better)
Translates to: QERNGWDEMKQI*GLQHPYTRTVV
Trigger: TACGACTGTGCGGGTGTACGGGTGCTGCAGCCCTCAGATCTGCTTCATCTCATCCCACCCATTCCTCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS TCA 72 bp TGGTCCTGGACTCTGCATGGCCTGGGTTACTCTCCATaGCCCCAGGTGTACTCTGCACCCTGTGCATGCTCA +
Preference number: 6 (lower is better)
Translates to: WSWTLHGLGYSP*PQVYSAPCACS
Trigger: TGAGCATGCACAGGGTGCAGAGTACACCTGGGGTCATGGAGAGTAACCCAGGCCATGCAGAGTCCAGGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS CAA 90 bp CTGGAGTGCGCCAGTTGGAGTTCTCTAAGGCGGGTGCCCTTGAACTaGTGCCTTCAGAGCACATTAGCGTTGGTTTCTCTACCCCTGCCC +
Preference number: 6 (lower is better)
Translates to: LECASWSSLRRVPLN*CLQSTLALVSLPLP
Trigger: GGGCAGGGGTAGAGAAACCAACGCTAATGTGCTCTGAAGGCACAAGTTCAAGGGCACCCGCCTTAGAGAACTCCAACTGGCGCACTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461836.6
CDS CAA 90 bp TGGCGTCTGGAGTGCGCCAGTTGGAGTTCTCTAAGGCGGGTGCCCTaGAACTTGTGCCTTCAGAGCACATTAGCGTTGGTTTCTCTACCC +
Preference number: 6 (lower is better)
Translates to: WRLECASWSSLRRVP*NLCLQSTLALVSLP
Trigger: GGGTAGAGAAACCAACGCTAATGTGCTCTGAAGGCACAAGTTCAAGGGCACCCGCCTTAGAGAACTCCAACTGGCGCACTCCAGACGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461836.6
CDS CAA 90 bp TCTTCTTGGAAACCTCCTTCTCCCACACCACTCTGCCAGGTCTCATaGCACTCATCACAAACCGCCAGGCTGCAGGGGCTGAGAGTGCAA +
Preference number: 6 (lower is better)
Translates to: SSWKPPSPTPLCQVS*HSSQTARLQGLRVQ
Trigger: TTGCACTCTCAGCCCCTGCAGCCTGGCGGTTTGTGATGAGTGCAATGAGACCTGGCAGAGTGGTGTGGGAGAAGGAGGTTTCCAAGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS GCA 72 bp GCACCCAGCAGTCCCAGAAGAACCTTCCACGGTGTCTaGAAGCCGAGCAGATCAAGTCCAATTAGAGGGAAG +
Preference number: 6 (lower is better)
Translates to: APSSPRRTFHGV*KPSRSSPIRGK
Trigger: CTTCCCTCTAATTGGACTTGATCTGCTCGGCTTGCAGACACCGTGGAAGGTTCTTCTGGGACTGCTGGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461836.6
ENST00000497461.5
CDS TCA 72 bp TACAGCTGGGAACACTTAATGTGCGAATGTGCCTGGTaGTACCGGGCTTCCATGCTACCCTGCTGTAAGGCG +
Preference number: 6 (lower is better)
Translates to: YSWEHLMCECAW*YRASMLPCCKA
Trigger: CGCCTTACAGCAGGGTAGCATGGAAGCCCGGTATCACCAGGCACATTCGCACATTAAGTGTTCCCAGCTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS GCA 72 bp CACAATCCACTTGCCCTCTCCTTCACAGGCTGGACCTaGCCCTCTCCTTGCTTGACTGCAAGCTCTTTTACA +
Preference number: 6 (lower is better)
Translates to: HNPLALSFTGWT*PSPCLTASSFT
Trigger: TGTAAAAGAGCTTGCAGTCAAGCAAGGAGAGGGGCAGGTCCAGCCTGTGAAGGAGAGGGCAAGTGGATTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS CAA 72 bp GAGTGCGCCAGTTGGAGTTCTCTAAGGCGGGTGCCCTaGAACTTGTGCCTTCAGAGCACATTAGCGTTGGTT +
Preference number: 6 (lower is better)
Translates to: ECASWSSLRRVP*NLCLQSTLALV
Trigger: AACCAACGCTAATGTGCTCTGAAGGCACAAGTTCAAGGGCACCCGCCTTAGAGAACTCCAACTGGCGCACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461836.6
CDS TCA 72 bp AAATGTGAGCTGACATCCTTCCCCACTCTAAATCCGTaGTCCCACAGGGTTTTTCAGGCTCTGCCCAGGTGG +
Preference number: 6 (lower is better)
Translates to: KCELTSFPTLNP*SHRVFQALPRW
Trigger: CCACCTGGGCAGAGCCTGAAAAACCCTGTGGGATCACGGATTTAGAGTGGGGAAGGATGTCAGCTCACATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491591.5
CDS GCA 72 bp TGTCTTCCAGGACTCTCAGCCCTTTATCATTCACGCTaGTGTGTAGAGTATAGAGGGGCAGACCAGGACTGG +
Preference number: 6 (lower is better)
Translates to: CLPGLSALYHSR*CVEYRGADQDW
Trigger: CCAGTCCTGGTCTGCCCCTCTATACTCTACACAGCAGCGTGAATGATAAAGGGCTGAGAGTCCTGGAAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491591.5
CDS GCA 72 bp ATGTCTTCTTGGAAACCTCCTTCTCCCACACCACTCTaGCAGGTCTCATTGCACTCATCACAAACCGCCAGG +
Preference number: 6 (lower is better)
Translates to: MSSWKPPSPTPL*QVSLHSSQTAR
Trigger: CCTGGCGGTTTGTGATGAGTGCAATGAGACCTGGCAGAGTGGTGTGGGAGAAGGAGGTTTCCAAGAAGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS GCA 72 bp CCCATTTTACAGCTGGGAACACTTAATGTGCGAATGTaGCTGGTGATACCGGGCTTCCATGCTACCCTGCTG +
Preference number: 6 (lower is better)
Translates to: PILQLGTLNVRM*LVIPGFHATLL
Trigger: CAGCAGGGTAGCATGGAAGCCCGGTATCACCAGGCACATTCGCACATTAAGTGTTCCCAGCTGTAAAATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS CCA 72 bp GAGACTCACCCTGGTTCAAGTTCAGGCCTTAGTTGTTaGAAACGCAGCCTGGCTGCCCTTCTCACTTATCAG +
Preference number: 6 (lower is better)
Translates to: ETHPGSSSGLSC*KRSLAALLTYQ
Trigger: CTGATAAGTGAGAAGGGCAGCCAGGCTGCGTTTCCAACAACTAAGGCCTGAACTTGAACCAGGGTGAGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS CCA 72 bp GGGCATATGCTATGTCGCAGGCACCCTACTACACACTaGAGATACGATTGCAGGATTGGCCTCTACTGCGTA +
Preference number: 6 (lower is better)
Translates to: GHMLCRRHPTTH*RYDCRIGLYCV
Trigger: TACGCAGTAGAGGCCAATCCTGCAATCGTATCTCCAGTGTGTAGTAGGGTGCCTGCGACATAGCATATGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS CCA 72 bp AGATCAAAGGTTTATGGTCCTGGACTCTGCATGGCCTaGGTTACTCTCCATGACCCCAGGTGTACTCTGCAC +
Preference number: 6 (lower is better)
Translates to: RSKVYGPGLCMA*VTLHDPRCTLH
Trigger: GTGCAGAGTACACCTGGGGTCATGGAGAGTAACCCAGGCCATGCAGAGTCCAGGACCATAAACCTTTGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS CAA 72 bp CTGAGCAGGTTACTAAGAGGCGTAACTCACCTGGTTTaGCTTGGCCCTGCTGGATCTTTGCATGAGGCCAGA +
Preference number: 6 (lower is better)
Translates to: LSRLLRGVTHLV*LGPAGSLHEAR
Trigger: TCTGGCCTCATGCAAAGATCCAGCAGGGCCAAGCAAAACCAGGTGAGTTACGCCTCTTAGTAACCTGCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS CAA 72 bp TCTTGGCCTAAATGTCCCCTCATCCACGATGTCTTCTaGGAAACCTCCTTCTCCCACACCACTCTGCCAGGT +
Preference number: 6 (lower is better)
Translates to: SWPKCPLIHDVF*ETSFSHTTLPG
Trigger: ACCTGGCAGAGTGGTGTGGGAGAAGGAGGTTTCCAAGAAGACATCGTGGATGAGGGGACATTTAGGCCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS CAA 90 bp GGTAACAGGCTGAGCAGGTTACTAAGAGGCGTAACTCACCTGGTTTaGCTTGGCCCTGCTGGATCTTTGCATGAGGCCAGAAAACGGTGT +
Preference number: 6 (lower is better)
Translates to: GNRLSRLLRGVTHLV*LGPAGSLHEARKRC
Trigger: ACACCGTTTTCTGGCCTCATGCAAAGATCCAGCAGGGCCAAGCAAAACCAGGTGAGTTACGCCTCTTAGTAACCTGCTCAGCCTGTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS CAA 90 bp TCTGGGTGGCTGGTATTCTCAGGAACACACCATGAGTTTCCCCAGTaGCCCCCTCTTTGTTCAGTCTTGCTCTTTAGCCTGAAGTGGCTG +
Preference number: 6 (lower is better)
Translates to: SGWLVFSGTHHEFPQ*PPLCSVLLFSLKWL
Trigger: CAGCCACTTCAGGCTAAAGAGCAAGACTGAACAAAGAGGGGGCAACTGGGGAAACTCATGGTGTGTTCCTGAGAATACCAGCCACCCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS TCA 72 bp CCTGAGAGCCTGGACAACTTACCCAGGTTAGACATATaGGCCAGCAAGCTCTTCTACCTTCTGCAGCTGGAT +
Preference number: 6 (lower is better)
Translates to: PESLDNLPRLDI*ASKLFYLLQLD
Trigger: ATCCAGCTGCAGAAGGTAGAAGAGCTTGCTGGCTCATATGTCTAACCTGGGTAAGTTGTCCAGGCTCTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS GCA 72 bp AGTTGGAGTTCTCTAAGGCGGGTGCCCTTGAACTTGTaGCTTCAGAGCACATTAGCGTTGGTTTCTCTACCC +
Preference number: 6 (lower is better)
Translates to: SWSSLRRVPLNL*LQSTLALVSLP
Trigger: GGGTAGAGAAACCAACGCTAATGTGCTCTGAAGGCACAAGTTCAAGGGCACCCGCCTTAGAGAACTCCAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461836.6
CDS GCA 72 bp TGTCGCAGGCACCCTACTACACACTGGAGATACGATTaGAGGATTGGCCTCTACTGCGTAGAACCTGTCTTA +
Preference number: 6 (lower is better)
Translates to: CRRHPTTHWRYD*RIGLYCVEPVL
Trigger: TAAGACAGGTTCTACGCAGTAGAGGCCAATCCTGCAATCGTATCTCCAGTGTGTAGTAGGGTGCCTGCGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS CCA 72 bp GTTCAAGTTCAGGCCTTAGTTGTTGGAAACGCAGCCTaGCTGCCCTTCTCACTTATCAGAGAAGCAGGGCTT +
Preference number: 6 (lower is better)
Translates to: VQVQALVVGNAA*LPFSLIREAGL
Trigger: AAGCCCTGCTTCTCTGATAAGTGAGAAGGGCAGCCAGGCTGCGTTTCCAACAACTAAGGCCTGAACTTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS CCA 72 bp CCCCCTCTTTGTTCAGTCTTGCTCTTTAGCCTGAAGTaGCTGCCAAGCTCTAACTTCCTTAGGTCTTGGCCT +
Preference number: 6 (lower is better)
Translates to: PPLCSVLLFSLK*LPSSNFLRSWP
Trigger: AGGCCAAGACCTAAGGAAGTTAGAGCTTGGCAGCCACTTCAGGCTAAAGAGCAAGACTGAACAAAGAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS CAA 72 bp GCCAGTTGGAGTTCTCTAAGGCGGGTGCCCTTGAACTaGTGCCTTCAGAGCACATTAGCGTTGGTTTCTCTA +
Preference number: 6 (lower is better)
Translates to: ASWSSLRRVPLN*CLQSTLALVSL
Trigger: TAGAGAAACCAACGCTAATGTGCTCTGAAGGCACAAGTTCAAGGGCACCCGCCTTAGAGAACTCCAACTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461836.6
CDS CAA 72 bp ATGTCGCAGGCACCCTACTACACACTGGAGATACGATaGCAGGATTGGCCTCTACTGCGTAGAACCTGTCTT +
Preference number: 6 (lower is better)
Translates to: MSQAPYYTLEIR*QDWPLLRRTCL
Trigger: AAGACAGGTTCTACGCAGTAGAGGCCAATCCTGCAATCGTATCTCCAGTGTGTAGTAGGGTGCCTGCGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS CAA 90 bp GCATATGCTATGTCGCAGGCACCCTACTACACACTGGAGATACGATaGCAGGATTGGCCTCTACTGCGTAGAACCTGTCTTACTTCAGTC +
Preference number: 6 (lower is better)
Translates to: AYAMSQAPYYTLEIR*QDWPLLRRTCLTSV
Trigger: GACTGAAGTAAGACAGGTTCTACGCAGTAGAGGCCAATCCTGCAATCGTATCTCCAGTGTGTAGTAGGGTGCCTGCGACATAGCATATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS CAA 90 bp ATCGCCCAACTGGGAAGTGTTGGAGCCGGGATTCAATTCAAGCTGTaGGCTTCAGATTCCCAGTTCATACTCGCTCCCTCTATGAAACCT +
Preference number: 6 (lower is better)
Translates to: IAQLGSVGAGIQFKL*ASDSQFILAPSMKP
Trigger: AGGTTTCATAGAGGGAGCGAGTATGAACTGGGAATCTGAAGCCAACAGCTTGAATTGAATCCCGGCTCCAACACTTCCCAGTTGGGCGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS CCA 72 bp TGTTTCTTGAGCCCAGCACTTCACACAGCTGTGCCTTaGAAACGGATCTGTAAGTGGGAAAGACTTCGTCTC +
Preference number: 6 (lower is better)
Translates to: CFLSPALHTAVP*KRICKWERLRL
Trigger: GAGACGAAGTCTTTCCCACTTACAGATCCGTTTCCAAGGCACAGCTGTGTGAAGTGCTGGGCTCAAGAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS CCA 72 bp GCACCCTACTACACACTGGAGATACGATTGCAGGATTaGCCTCTACTGCGTAGAACCTGTCTTACTTCAGTC +
Preference number: 6 (lower is better)
Translates to: APYYTLEIRLQD*PLLRRTCLTSV
Trigger: GACTGAAGTAAGACAGGTTCTACGCAGTAGAGGCCAATCCTGCAATCGTATCTCCAGTGTGTAGTAGGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS CCA 72 bp TGTGATGAGCCCCAGAGCCATTCAACAGATGTTGGGTaGGGTTACTACAGTAGAACATGCCCTTTCCAATCC +
Preference number: 6 (lower is better)
Translates to: CDEPQSHSTDVG*GYYSRTCPFQS
Trigger: GGATTGGAAAGGGCATGTTCTACTGTAGTAACCCCACCCAACATCTGTTGAATGGCTCTGGGGCTCATCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS CCA 72 bp TTTTCAGATCAAAGGTTTATGGTCCTGGACTCTGCATaGCCTGGGTTACTCTCCATGACCCCAGGTGTACTC +
Preference number: 6 (lower is better)
Translates to: FSDQRFMVLDSA*PGLLSMTPGVL
Trigger: GAGTACACCTGGGGTCATGGAGAGTAACCCAGGCCATGCAGAGTCCAGGACCATAAACCTTTGATCTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS CCA 72 bp GTCATCTTCCCTGCCCATTTTCAGATCAAAGGTTTATaGTCCTGGACTCTGCATGGCCTGGGTTACTCTCCA +
Preference number: 6 (lower is better)
Translates to: VIFPAHFQIKGL*SWTLHGLGYSP
Trigger: TGGAGAGTAACCCAGGCCATGCAGAGTCCAGGACCATAAACCTTTGATCTGAAAATGGGCAGGGAAGATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS CCA 72 bp CTGAAGTGGCTGCCAAGCTCTAACTTCCTTAGGTCTTaGCCTAAATGTCCCCTCATCCACGATGTCTTCTTG +
Preference number: 6 (lower is better)
Translates to: LKWLPSSNFLRS*PKCPLIHDVFL
Trigger: CAAGAAGACATCGTGGATGAGGGGACATTTAGGCCAAGACCTAAGGAAGTTAGAGCTTGGCAGCCACTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS CCA 72 bp CAGACATTTACTGGGCACTCGGGATGGATTAGGTGCTaGATAAAGCCCTTTAAGCCCCTCACAGCTTCATCA +
Preference number: 6 (lower is better)
Translates to: QTFTGHSGWIRC*IKPFKPLTASS
Trigger: TGATGAAGCTGTGAGGGGCTTAAAGGGCTTTATCCAGCACCTAATCCATCCCGAGTGCCCAGTAAATGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS CAA 72 bp CTGGTATTCTCAGGAACACACCATGAGTTTCCCCAGTaGCCCCCTCTTTGTTCAGTCTTGCTCTTTAGCCTG +
Preference number: 6 (lower is better)
Translates to: LVFSGTHHEFPQ*PPLCSVLLFSL
Trigger: CAGGCTAAAGAGCAAGACTGAACAAAGAGGGGGCAACTGGGGAAACTCATGGTGTGTTCCTGAGAATACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS TCA 72 bp TCACCTGGTTTTGCTTGGCCCTGCTGGATCTTTGCATaGGGCCAGAAAACGGTGTATCATCATGTACTAGAG +
Preference number: 6 (lower is better)
Translates to: SPGFAWPCWIFA*GQKTVYHHVLE
Trigger: CTCTAGTACATGATGATACACCGTTTTCTGGCCTCATGCAAAGATCCAGCAGGGCCAAGCAAAACCAGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS TCA 72 bp GACGCTTCTGCATCTGCCCAATGCAGGGGAGCTAAATaGGAACCTGGAAAGGTGAATACACTTTACCCAAGA +
Preference number: 6 (lower is better)
Translates to: DASASAQCRGAK*EPGKVNTLYPR
Trigger: TCTTGGGTAAAGTGTATTCACCTTTCCAGGTTCTCATTTAGCTCCCCTGCATTGGGCAGATGCAGAAGCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS TCA 72 bp AGTTGCCCCCTCTTTGTTCAGTCTTGCTCTTTAGCCTaGAGTGGCTGCCAAGCTCTAACTTCCTTAGGTCTT +
Preference number: 6 (lower is better)
Translates to: SCPLFVQSCSLA*SGCQALTSLGL
Trigger: AAGACCTAAGGAAGTTAGAGCTTGGCAGCCACTTCAGGCTAAAGAGCAAGACTGAACAAAGAGGGGGCAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS GCA 72 bp TCTTACTTGTGGACCACACAGAAATGGGCAGTGGACTaGATTTGGCCCATAAACCCTAGTGTGTTAACCCCT +
Preference number: 6 (lower is better)
Translates to: SYLWTTQKWAVD*IWPINPSVLTP
Trigger: AGGGGTTAACACACTAGGGTTTATGGGCCAAATGCAGTCCACTGCCCATTTCTGTGTGGTCCACAAGTAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS CAA 72 bp GTAACTCACCTGGTTTTGCTTGGCCCTGCTGGATCTTaGCATGAGGCCAGAAAACGGTGTATCATCATGTAC +
Preference number: 6 (lower is better)
Translates to: VTHLVLLGPAGS*HEARKRCIIMY
Trigger: GTACATGATGATACACCGTTTTCTGGCCTCATGCAAAGATCCAGCAGGGCCAAGCAAAACCAGGTGAGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS CAA 90 bp ATGCGTGACTCAAACCACGAGCTCAGGATTTATCAAGTCTTCAGCTaGGCCTTTGGTAATGCCAGGGAGTCAAGGGTAATGTTTTCGCAT +
Preference number: 6 (lower is better)
Translates to: MRDSNHELRIYQVFS*AFGNARESRVMFSH
Trigger: ATGCGAAAACATTACCCTTGACTCCCTGGCATTACCAAAGGCCAAGCTGAAGACTTGATAAATCCTGAGCTCGTGGTTTGAGTCACGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677015.1
ENST00000678583.1
CDS GCA 72 bp TCAACAGATGTTGGGTGGGGTTACTACAGTAGAACATaGCCTTTCCAATCCCCTAGATTCAGGCCACAGAAT +
Preference number: 6 (lower is better)
Translates to: STDVGWGYYSRT*PFQSPRFRPQN
Trigger: ATTCTGTGGCCTGAATCTAGGGGATTGGAAAGGGCATGTTCTACTGTAGTAACCCCACCCAACATCTGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS GCA 72 bp CCTCCTGAGCCACTGCAAAGAAATTCTTTCTTGTGTTaGCCATGTCACATCACACAAGTAGTGATCCCTGGA +
Preference number: 6 (lower is better)
Translates to: PPEPLQRNSFLC*PCHITQVVIPG
Trigger: TCCAGGGATCACTACTTGTGTGATGTGACATGGGCAACACAAGAAAGAATTTCTTTGCAGTGGCTCAGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677015.1
ENST00000678583.1
CDS GCA 72 bp ACTTCCCTCCCCTTGCACAAAGTTTTTCTATACCATTaGCTGGAAATCCACTCCAACATCGACCAGGGCTTT +
Preference number: 6 (lower is better)
Translates to: TSLPLHKVFLYH*LEIHSNIDQGF
Trigger: AAAGCCCTGGTCGATGTTGGAGTGGATTTCCAGGCAATGGTATAGAAAAACTTTGTGCAAGGGGAGGGAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000676768.1
ENST00000677015.1
ENST00000677212.1
ENST00000678522.1
CDS CCA 72 bp ATGCCTGACTCAACACAGGCACTAATTATATGTCCGTaGAATGCAGCACAGAAGAAAGCAAAGCCCTCTCCT +
Preference number: 6 (lower is better)
Translates to: MPDSTQALIICP*NAAQKKAKPSP
Trigger: AGGAGAGGGCTTTGCTTTCTTCTGTGCTGCATTCCACGGACATATAATTAGTGCCTGTGTTGAGTCAGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS CAA 72 bp TCAAGGGTAATGTTTTCGCATCTCCTTTCTGCTGTCTaGAGGGAAGTGAGGCCACAGACACTGGCTAAGATT +
Preference number: 6 (lower is better)
Translates to: SRVMFSHLLSAV*REVRPQTLAKI
Trigger: AATCTTAGCCAGTGTCTGTGGCCTCACTTCCCTCAAGACAGCAGAAAGGAGATGCGAAAACATTACCCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677015.1
ENST00000678583.1
CDS CAA 72 bp TCAAACCACGAGCTCAGGATTTATCAAGTCTTCAGCTaGGCCTTTGGTAATGCCAGGGAGTCAAGGGTAATG +
Preference number: 6 (lower is better)
Translates to: SNHELRIYQVFS*AFGNARESRVM
Trigger: CATTACCCTTGACTCCCTGGCATTACCAAAGGCCAAGCTGAAGACTTGATAAATCCTGAGCTCGTGGTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677015.1
ENST00000678583.1
CDS CAA 72 bp ACGTTGTTCTGTCCTGCAGAAGTCTCTGATCCTCTTTaGCAGGTGCTGAGAGAACTCACTGTGAATTTGGCT +
Preference number: 6 (lower is better)
Translates to: TLFCPAEVSDPL*QVLRELTVNLA
Trigger: AGCCAAATTCACAGTGAGTTCTCTCAGCACCTGCAAAAGAGGATCAGAGACTTCTGCAGGACAGAACAACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677015.1
ENST00000677212.1
ENST00000678522.1
CDS CAA 90 bp CGAATAGTTCTGAATCCTCCTGAGCCACTGCAAAGAAATTCTTTCTaGTGTTGCCCATGTCACATCACACAAGTAGTGATCCCTGGAAGG +
Preference number: 6 (lower is better)
Translates to: RIVLNPPEPLQRNSF*CCPCHITQVVIPGR
Trigger: CCTTCCAGGGATCACTACTTGTGTGATGTGACATGGGCAACACAAGAAAGAATTTCTTTGCAGTGGCTCAGGAGGATTCAGAACTATTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677015.1
ENST00000678583.1
CDS CAA 90 bp TTCCAGGGCACGTTGTTCTGTCCTGCAGAAGTCTCTGATCCTCTTTaGCAGGTGCTGAGAGAACTCACTGTGAATTTGGCTTTATTGAAT +
Preference number: 6 (lower is better)
Translates to: FQGTLFCPAEVSDPL*QVLRELTVNLALLN
Trigger: ATTCAATAAAGCCAAATTCACAGTGAGTTCTCTCAGCACCTGCAAAAGAGGATCAGAGACTTCTGCAGGACAGAACAACGTGCCCTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677015.1
ENST00000677212.1
ENST00000678522.1
CDS GCA 72 bp GTAATGGAATTTGGGAAGTCAGCCAGGAAACTCACGTaGATCAGTCATCTTCCCTGCCCATTTTCAGATCAA +
Preference number: 6 (lower is better)
Translates to: VMEFGKSARKLT*ISHLPCPFSDQ
Trigger: TTGATCTGAAAATGGGCAGGGAAGATGACTGATGCACGTGAGTTTCCTGGCTGACTTCCCAAATTCCATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS GCA 72 bp AGCATTGTGGTCCACATCTCTGTCACTACTCCACTCTaGCTTTGTAGCACAAATGTAGCCAGAGACCATAAT +
Preference number: 6 (lower is better)
Translates to: SIVVHISVTTPL*LCSTNVARDHN
Trigger: ATTATGGTCTCTGGCTACATTTGTGCTACAAAGGCAGAGTGGAGTAGTGACAGAGATGTGGACCACAATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS GCA 72 bp CAGGGAGCATTTCAAGAAGGAGAGAAAGATCCACTTTaGCATATGCTGCAGAAAGAGTCCAACAGGTTGAGA +
Preference number: 6 (lower is better)
Translates to: QGAFQEGEKDPL*HMLQKESNRLR
Trigger: TCTCAACCTGTTGGACTCTTTCTGCAGCATATGGCAAAGTGGATCTTTCTCTCCTTCTTGAAATGCTCCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676996.1
ENST00000677212.1
ENST00000678522.1
ENST00000678740.1
CDS CAA 72 bp AGACAAAGAAACTTAACAGCAGAGGATTTAAGTAACTaGCCCACTATCGCCCAACTGGGAAGTGTTGGAGCC +
Preference number: 6 (lower is better)
Translates to: RQRNLTAEDLSN*PTIAQLGSVGA
Trigger: GGCTCCAACACTTCCCAGTTGGGCGATAGTGGGCAAGTTACTTAAATCCTCTGCTGTTAAGTTTCTTTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS TCA 72 bp CTCTCCTCACCTGTGGGACCTGTCATATTGTCATACTaGAGGACCATAGCTTTGTCCTTCTTCAGAATTCAT +
Preference number: 6 (lower is better)
Translates to: LSSPVGPVILSY*RTIALSFFRIH
Trigger: ATGAATTCTGAAGAAGGACAAAGCTATGGTCCTTCAGTATGACAATATGACAGGTCCCACAGGTGAGGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS GCA 72 bp ACACACTGGAGATACGATTGCAGGATTGGCCTCTACTaGGTAGAACCTGTCTTACTTCAGTCAACAATGAAT +
Preference number: 6 (lower is better)
Translates to: THWRYDCRIGLY*VEPVLLQSTMN
Trigger: ATTCATTGTTGACTGAAGTAAGACAGGTTCTACGCAGTAGAGGCCAATCCTGCAATCGTATCTCCAGTGTGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS GCA 72 bp CCCGATTGTGGTTTTGGATTACTATTCACAAATCCCTaGTCTCGAGTGTCTGATTGCAGCCTTGCTCTTTTT +
Preference number: 6 (lower is better)
Translates to: PDCGFGLLFTNP*SRVSDCSLALF
Trigger: AAAAAGAGCAAGGCTGCAATCAGACACTCGAGAGCAGGGATTTGTGAATAGTAATCCAAAACCACAATCGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS CCA 72 bp AGTAAAAACCATTCTTACTTGTGGACCACACAGAAATaGGCAGTGGACTGCATTTGGCCCATAAACCCTAGT +
Preference number: 6 (lower is better)
Translates to: SKNHSYLWTTQK*AVDCIWPINPS
Trigger: ACTAGGGTTTATGGGCCAAATGCAGTCCACTGCCCATTTCTGTGTGGTCCACAAGTAAGAATGGTTTTTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS TCA 72 bp TTCCAAACATATGCTAACCAATTTATGACCCACTGGTaGCCATGTGACCCACTGTGTGTTGTTTGGAATCCT +
Preference number: 6 (lower is better)
Translates to: FQTYANQFMTHW*PCDPLCVVWNP
Trigger: AGGATTCCAAACAACACACAGTGGGTCACATGGTCACCAGTGGGTCATAAATTGGTTAGCATATGTTTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434918.6
CDS TCA 72 bp CACTTTGCCATATGCTGCAGAAAGAGTCCAACAGGTTaGGAAATGACAGTACTCGTGATTCCAAAGGTAATG +
Preference number: 6 (lower is better)
Translates to: HFAICCRKSPTG*EMTVLVIPKVM
Trigger: CATTACCTTTGGAATCACGAGTACTGTCATTTCTCAACCTGTTGGACTCTTTCTGCAGCATATGGCAAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676996.1
ENST00000677212.1
ENST00000678522.1
ENST00000678740.1
CDS CAA 90 bp CCATCCATCCTCTGCTTATCTATTAGTTTATTCTACAAATATTGGTaGGGCATATGCTATGTCGCAGGCACCCTACTACACACTGGAGAT +
Preference number: 6 (lower is better)
Translates to: PSILCLSISLFYKYW*GICYVAGTLLHTGD
Trigger: ATCTCCAGTGTGTAGTAGGGTGCCTGCGACATAGCATATGCCCAACCAATATTTGTAGAATAAACTAATAGATAAGCAGAGGATGGATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS CAA 72 bp TCATTGTTTACTTTTCTGCTGGCCTCCCTCACATTATaGGCAATGGATAGTTTATGCTTTTTCTCCCTCCTC +
Preference number: 6 (lower is better)
Translates to: SLFTFLLASLTL*AMDSLCFFSLL
Trigger: GAGGAGGGAGAAAAAGCATAAACTATCCATTGCCAATAATGTGAGGGAGGCCAGCAGAAAAGTAAACAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS TCA 72 bp GGCAAATTATATGTGAATGCACTGAGAGAGACTTGTTaGAAATCACACAACAGAGAATCCCCTTGTAAAGTG +
Preference number: 6 (lower is better)
Translates to: GKLYVNALRETC*KSHNRESPCKV
Trigger: CACTTTACAAGGGGATTCTCTGTTGTGTGATTTTCAACAAGTCTCTCTCAGTGCATTCACATATAATTTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS GCA 72 bp CATCTATGCTTTGCATACTGCATGCTGCTTTTATTCTaGAAAAACAGGCCAATACTGAGTAGCTTTCTTATG +
Preference number: 6 (lower is better)
Translates to: HLCFAYCMLLLF*KNRPILSSFLM
Trigger: CATAAGAAAGCTACTCAGTATTGGCCTGTTTTTGCAGAATAAAAGCAGCATGCAGTATGCAAAGCATAGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS GCA 72 bp TATAGTGAAGTGCATGGAATTCATTGTTTACTTTTCTaGTGGCCTCCCTCACATTATTGGCAATGGATAGTT +
Preference number: 6 (lower is better)
Translates to: YSEVHGIHCLLF*WPPSHYWQWIV
Trigger: AACTATCCATTGCCAATAATGTGAGGGAGGCCAGCAGAAAAGTAAACAATGAATTCCATGCACTTCACTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678583.1
CDS GCA 72 bp TCATCCATTCATCCATCCACCCATCCATCCATCCTCTaGTTATCTATTAGTTTATTCTACAAATATTGGTTG +
Preference number: 6 (lower is better)
Translates to: SSIHPSTHPSIL*LSISLFYKYWL
Trigger: CAACCAATATTTGTAGAATAAACTAATAGATAAGCAGAGGATGGATGGATGGGTGGATGGATGAATGGATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678583.1