Pregenerated sensors for DPM3 (Homo sapiens)

Ensembl gene IDs: ENSG00000179085

Ensembl transcript IDs: ENST00000341298.3, ENST00000368399.1, ENST00000368400.5

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	CTAATTTCGTCATGGTCACTGCGAGAGAAGGAAGCAATGCTCCCCTaGGGAGCAGAAAGGAAAAGCGGACCAAACTCAACCGAAGCCCGC	+
Preference number: 5 (lower is better) Translates to: LISSWSLREKEAMLP*GAERKSGPNSTEAR Trigger: GCGGGCTTCGGTTGAGTTTGGTCCGCTTTTCCTTTCTGCTCCTCAGGGGAGCATTGCTTCCTTCTCTCGCAGTGACCATGACGAAATTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368399.1
CDS CCA 72 bp	CGCGCGGCCCGGATGTTGGCGTCCGGAAGTCCTCCCTaGTTCACGTTCCGCTTCCGCGCGGCCTTCTGGGAG	+
Preference number: 6 (lower is better) Translates to: RAARMLASGSPP*FTFRFRAAFWE Trigger: CTCCCAGAAGGCCGCGCGGAAGCGGAACGTGAACCAGGGAGGACTTCCGGACGCCAACATCCGGGCCGCGCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341298.3
CDS GCA 72 bp	GGCTCGGGCCTCCTGTATCTGGCTCTGCAGCTCGCGTaGGGCGTCCTCGCAGTCATGAAAAGTGGCCACACG	+
Preference number: 6 (lower is better) Translates to: GSGLLYLALQLA*GVLAVMKSGHT Trigger: CGTGTGGCCACTTTTCATGACTGCGAGGACGCCGCACGCGAGCTGCAGAGCCAGATACAGGAGGCCCGAGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000341298.3 ENST00000368399.1 ENST00000368400.5

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