Pregenerated sensors for DPH6-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000248079Ensembl transcript IDs: ENST00000501169.3, ENST00000559210.1, ENST00000560866.1, ENST00000661846.1
Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TTTCCTGGGCCGAGATGTCCCTGCCACAGGGTCAAGGTGCCAAGGTaGCGCACCCTCCGCGCTCAGGTGTCCCGCAGGCAGCCGCGGGGC | + |
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Preference number: 5 (lower is better) Translates to: FPGPRCPCHRVKVPR*RTLRAQVSRRQPRG Trigger: GCCCCGCGGCTGCCTGCGGGACACCTGAGCGCGGAGGGTGCGGCACCTTGGCACCTTGACCCTGTGGCAGGGACATCTCGGCCCAGGAAA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000501169.3 |
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| CDS GCA 90 bp | CCTCATTCTTTCCTGGGCCGAGATGTCCCTGCCACAGGGTCAAGGTaGCAAGGTGCCGCACCCTCCGCGCTCAGGTGTCCCGCAGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: PHSFLGRDVPATGSR*QGAAPSALRCPAGS Trigger: GCTGCCTGCGGGACACCTGAGCGCGGAGGGTGCGGCACCTTGGCACCTTGACCCTGTGGCAGGGACATCTCGGCCCAGGAAAGAATGAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000501169.3 |
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| CDS TCA 90 bp | GAACTGTGCTATCGTGATCTTTCAGCGCCACTTCATGGGGGATGCTaGGCCCAGGAGTTCGAAACCAGCTTAGGCAACATAGGGAAACAT | + |
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Preference number: 5 (lower is better) Translates to: ELCYRDLSAPLHGGC*AQEFETSLGNIGKH Trigger: ATGTTTCCCTATGTTGCCTAAGCTGGTTTCGAACTCCTGGGCTCAGCATCCCCCATGAAGTGGCGCTGAAAGATCACGATAGCACAGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000560866.1 |
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| CDS TCA 90 bp | CATGATCACATAGGAAACCATCTCCATTCCAGAGATGAAGCAAACTaGGACCAAAACAAATCCTGCGCCACTGGGCTTGGGCTCTGCAAC | + |
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Preference number: 5 (lower is better) Translates to: HDHIGNHLHSRDEAN*DQNKSCATGLGLCN Trigger: GTTGCAGAGCCCAAGCCCAGTGGCGCAGGATTTGTTTTGGTCTCAGTTTGCTTCATCTCTGGAATGGAGATGGTTTCCTATGTGATCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000501169.3 ENST00000559210.1 |
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| CDS GCA 90 bp | ATGGAACTGTGCTATCGTGATCTTTCAGCGCCACTTCATGGGGGATaGCATTCTTCAAACCTCACAGCCCTCTTCAATTCTTTCCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: MELCYRDLSAPLHGG*HSSNLTALFNSFLS Trigger: GGAGAGGAAAGAATTGAAGAGGGCTGTGAGGTTTGAAGAATGGCATCCCCCATGAAGTGGCGCTGAAAGATCACGATAGCACAGTTCCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000501169.3 |
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| CDS TCA 90 bp | AAATTGCAGACTTGTGGTATTTCACATCATGGAACTGTGCTATCGTaGTCTTTCAGCGCCACTTCATGGGGGATGCTGAGCCCAGGAGTT | + |
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Preference number: 5 (lower is better) Translates to: KLQTCGISHHGTVLS*SFSATSWGMLSPGV Trigger: AACTCCTGGGCTCAGCATCCCCCATGAAGTGGCGCTGAAAGATCACGATAGCACAGTTCCATGATGTGAAATACCACAAGTCTGCAATTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000560866.1 |
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| CDS GCA 90 bp | GATTTCCATCCTCTCAGCCCAGCGACACTCTCAAGACCGAAAAATTaGAGACTTGTGGTATTTCACATCATGGAACTGTGCTATCGTGAT | + |
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Preference number: 5 (lower is better) Translates to: DFHPLSPATLSRPKN*RLVVFHIMELCYRD Trigger: ATCACGATAGCACAGTTCCATGATGTGAAATACCACAAGTCTGCAATTTTTCGGTCTTGAGAGTGTCGCTGGGCTGAGAGGATGGAAATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000501169.3 ENST00000559210.1 ENST00000560866.1 ENST00000661846.1 |
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| CDS TCA 90 bp | GTATTTGGTCCCAAATGTGAGACGAATACAAACTGGTATAATTACTaGAAGATTTCCATCCTCTCAGCCCAGCGACACTCTCAAGACCGA | + |
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Preference number: 5 (lower is better) Translates to: VFGPKCETNTNWYNY*KISILSAQRHSQDR Trigger: TCGGTCTTGAGAGTGTCGCTGGGCTGAGAGGATGGAAATCTTTCAGTAATTATACCAGTTTGTATTCGTCTCACATTTGGGACCAAATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000501169.3 ENST00000559210.1 ENST00000560866.1 ENST00000661846.1 |
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| CDS CCA 90 bp | GTCAATGTACTATTAGTGTACAGAAGGGCTGGGGAAGCTAAGTTTTaGTGGACAGGATTTCACCTAAGAGCATTTCTAGTTAGTGTCCCA | + |
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Preference number: 5 (lower is better) Translates to: VNVLLVYRRAGEAKF*WTGFHLRAFLVSVP Trigger: TGGGACACTAACTAGAAATGCTCTTAGGTGAAATCCTGTCCACCAAAACTTAGCTTCCCCAGCCCTTCTGTACACTAATAGTACATTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000501169.3 |
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| CDS CCA 90 bp | AATGTACTATTAGTGTACAGAAGGGCTGGGGAAGCTAAGTTTTGGTaGACAGGATTTCACCTAAGAGCATTTCTAGTTAGTGTCCCAAAG | + |
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Preference number: 5 (lower is better) Translates to: NVLLVYRRAGEAKFW*TGFHLRAFLVSVPK Trigger: CTTTGGGACACTAACTAGAAATGCTCTTAGGTGAAATCCTGTCCACCAAAACTTAGCTTCCCCAGCCCTTCTGTACACTAATAGTACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000501169.3 |
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| CDS TCA 90 bp | TGGTTAAGGTTTACCCAGGACTTTCAACCATCTTGCAAATTCCAATaGCAGTCAAAAGTAAGTAAAGTAGTTCAAAAGCAGAGCAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: WLRFTQDFQPSCKFQ*QSKVSKVVQKQSKL Trigger: CAGCTTGCTCTGCTTTTGAACTACTTTACTTACTTTTGACTGTCATTGGAATTTGCAAGATGGTTGAAAGTCCTGGGTAAACCTTAACCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000501169.3 |
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| CDS GCA 72 bp | TTCCTGGGCCGAGATGTCCCTGCCACAGGGTCAAGGTaGCAAGGTGCCGCACCCTCCGCGCTCAGGTGTCCC | + |
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Preference number: 6 (lower is better) Translates to: FLGRDVPATGSR*QGAAPSALRCP Trigger: GGGACACCTGAGCGCGGAGGGTGCGGCACCTTGGCACCTTGACCCTGTGGCAGGGACATCTCGGCCCAGGAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000501169.3 |
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| CDS CAA 72 bp | CCTGCGCCACTGGGCTTGGGCTCTGCAACGCGGACCTaGCCCTTCCCCCGGCAGCTTCAGTGCCCTCACTTA | + |
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Preference number: 6 (lower is better) Translates to: PAPLGLGSATRT*PFPRQLQCPHL Trigger: TAAGTGAGGGCACTGAAGCTGCCGGGGGAAGGGCAAGGTCCGCGTTGCAGAGCCCAAGCCCAGTGGCGCAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000501169.3 ENST00000559210.1 |
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| CDS CCA 72 bp | AAACTGAGACCAAAACAAATCCTGCGCCACTGGGCTTaGGCTCTGCAACGCGGACCTTGCCCTTCCCCCGGC | + |
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Preference number: 6 (lower is better) Translates to: KLRPKQILRHWA*ALQRGPCPSPG Trigger: GCCGGGGGAAGGGCAAGGTCCGCGTTGCAGAGCCCAAGCCCAGTGGCGCAGGATTTGTTTTGGTCTCAGTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000501169.3 ENST00000559210.1 |
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| CDS CAA 72 bp | CAAACTGAGACCAAAACAAATCCTGCGCCACTGGGCTaGGGCTCTGCAACGCGGACCTTGCCCTTCCCCCGG | + |
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Preference number: 6 (lower is better) Translates to: QTETKTNPAPLG*GSATRTLPFPR Trigger: CCGGGGGAAGGGCAAGGTCCGCGTTGCAGAGCCCAAGCCCAGTGGCGCAGGATTTGTTTTGGTCTCAGTTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000501169.3 ENST00000559210.1 |
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| CDS CAA 90 bp | GAGATGAAGCAAACTGAGACCAAAACAAATCCTGCGCCACTGGGCTaGGGCTCTGCAACGCGGACCTTGCCCTTCCCCCGGCAGCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: EMKQTETKTNPAPLG*GSATRTLPFPRQLQ Trigger: CTGAAGCTGCCGGGGGAAGGGCAAGGTCCGCGTTGCAGAGCCCAAGCCCAGTGGCGCAGGATTTGTTTTGGTCTCAGTTTGCTTCATCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000501169.3 ENST00000559210.1 |
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| CDS TCA 72 bp | TATCGTGATCTTTCAGCGCCACTTCATGGGGGATGCTaGGCCCAGGAGTTCGAAACCAGCTTAGGCAACATA | + |
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Preference number: 6 (lower is better) Translates to: YRDLSAPLHGGC*AQEFETSLGNI Trigger: TATGTTGCCTAAGCTGGTTTCGAACTCCTGGGCTCAGCATCCCCCATGAAGTGGCGCTGAAAGATCACGATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000560866.1 |
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| CDS CAA 72 bp | TCCTCTCAGCCCAGCGACACTCTCAAGACCGAAAAATaGCAGACTTGTGGTATTTCACATCATGGAACTGTG | + |
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Preference number: 6 (lower is better) Translates to: SSQPSDTLKTEK*QTCGISHHGTV Trigger: CACAGTTCCATGATGTGAAATACCACAAGTCTGCAATTTTTCGGTCTTGAGAGTGTCGCTGGGCTGAGAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000501169.3 ENST00000559210.1 ENST00000560866.1 ENST00000661846.1 |
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| CDS GCA 72 bp | AATTGCAGACTTGTGGTATTTCACATCATGGAACTGTaGTATCGTGATCTTTCAGCGCCACTTCATGGGGGA | + |
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Preference number: 6 (lower is better) Translates to: NCRLVVFHIMEL*YRDLSAPLHGG Trigger: TCCCCCATGAAGTGGCGCTGAAAGATCACGATAGCACAGTTCCATGATGTGAAATACCACAAGTCTGCAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000501169.3 ENST00000559210.1 ENST00000560866.1 ENST00000661846.1 |
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| CDS TCA 72 bp | CCCAAATGTGAGACGAATACAAACTGGTATAATTACTaGAAGATTTCCATCCTCTCAGCCCAGCGACACTCT | + |
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Preference number: 6 (lower is better) Translates to: PKCETNTNWYNY*KISILSAQRHS Trigger: AGAGTGTCGCTGGGCTGAGAGGATGGAAATCTTTCAGTAATTATACCAGTTTGTATTCGTCTCACATTTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000501169.3 ENST00000559210.1 ENST00000560866.1 ENST00000661846.1 |
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| CDS CCA 72 bp | TTAGTGTACAGAAGGGCTGGGGAAGCTAAGTTTTGGTaGACAGGATTTCACCTAAGAGCATTTCTAGTTAGT | + |
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Preference number: 6 (lower is better) Translates to: LVYRRAGEAKFW*TGFHLRAFLVS Trigger: ACTAACTAGAAATGCTCTTAGGTGAAATCCTGTCCACCAAAACTTAGCTTCCCCAGCCCTTCTGTACACTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000501169.3 |
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| CDS CAA 72 bp | ATATTCACAGGGAGAAAGAGTGGATCGGATTTGTATTaGGTCCCAAATGTGAGACGAATACAAACTGGTATA | + |
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Preference number: 6 (lower is better) Translates to: IFTGRKSGSDLY*VPNVRRIQTGI Trigger: TATACCAGTTTGTATTCGTCTCACATTTGGGACCAAATACAAATCCGATCCACTCTTTCTCCCTGTGAATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000501169.3 ENST00000559210.1 ENST00000560866.1 ENST00000661846.1 |
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