Pregenerated sensors for DPH5 (Homo sapiens)
Ensembl gene IDs: ENSG00000117543Ensembl transcript IDs: ENST00000342173.11, ENST00000370105.7, ENST00000370109.8, ENST00000427040.2, ENST00000464270.5, ENST00000466807.5, ENST00000476507.1, ENST00000477293.5, ENST00000481871.5, ENST00000481982.1, ENST00000488176.1, ENST00000488789.5, ENST00000490732.5, ENST00000492067.5, ENST00000498372.5
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CTGTCAGTGGATGTCTATCCACAAGCTTTCCAGCCTGGTCTGCTTTATGTGTACATTCTCACACTGCTATaGAGAAATACCCGAGACTGG | + |
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Preference number: 2 (lower is better) Translates to: LSVDVYPQAFQPGLLYVYILTLL*RNTRDW Trigger: CCAGTCTCGGGTATTTCTTCATAGCAGTGTGAGAAT...GTACACATAAAGCAGACCAGGCTGGAAAGCTTGTGGATAGACATCCACTGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370109.8 |
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| 3UTR CCA 72 bp | AAGAGGTTTAATTTTCGACTCACAGTTCCACATGGCTaGGAAGGCCTCAGGAAACTTAACAATCACGGTGGA | + |
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Preference number: 3 (lower is better) Translates to: KRFNFRLTVPHG*EGLRKLNNHGG Trigger: TCCACCGTGATTGTTAAGTTTCCTGAGGCCTTCCCAGCCATGTGGAACTGTGAGTCGAAAATTAAACCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370109.8 ENST00000427040.2 |
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| 3UTR CCA 72 bp | TCTGTCAGTGGATGTCTATCCACAAGCTTTCCAGCCTaGTCTGCTTTATGTGTACATCCTGAAAATTTGCCA | + |
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Preference number: 3 (lower is better) Translates to: SVSGCLSTSFPA*SALCVHPENLP Trigger: TGGCAAATTTTCAGGATGTACACATAAAGCAGACCAGGCTGGAAAGCTTGTGGATAGACATCCACTGACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370109.8 |
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| 3UTR TCA 72 bp | CATGATTCAATTACCTACCACAACACCTGGGAATTATaGGGATTAAAATTCAAGATGAGACTTGGGTGGGGA | + |
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Preference number: 3 (lower is better) Translates to: HDSITYHNTWEL*GLKFKMRLGWG Trigger: TCCCCACCCAAGTCTCATCTTGAATTTTAATCCTCATAATTCCCAGGTGTTGTGGTAGGTAATTGAATCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000342173.11 ENST00000370109.8 ENST00000427040.2 |
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| CDS-3UTR GCA 90 bp | CCTCTTCACAGGGCGGCAAGAGTGAGAATGAGAGCCAGTAGGGGAAATGCCAGGTCCACAGTGCACATTTaGCTTAAAGTGCCTGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: PLHRAARVRMRASRGNARSTVHI*LKVPAA Trigger: TGCAGCAGGCACTTTAAGGCAAATGTGCACTGTGGA...CCTGGCATTTCCCCTACTGGCTCTCATTCTCACTCTTGCCGCCCTGTGAAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370109.8 ENST00000427040.2 |
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| CDS-3UTR CCA 90 bp | TTCCACATGGCTGGGAAGGCCTCAGGAAACTTAACAATCACGGTGGAAGGCACCATCTCCAGAAGCTGCTaGGCTGCTTGGTTTACACTC | + |
|
Preference number: 4 (lower is better) Translates to: FHMAGKASGNLTITVEGTISRSC*AAWFTL Trigger: GAGTGTAAACCAAGCAGCCCAGCAGCTTCTGGAGAT...GGTGCCTTCCACCGTGATTGTTAAGTTTCCTGAGGCCTTCCCAGCCATGTGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370109.8 |
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| CDS-3UTR CCA 90 bp | TTCCACATGGCTGGGAAGGCCTCAGGAAACTTAACAATCACGGTGGAAGGCACCTGTTGTGGCCCCAAATaGATCACCAACCACAAGGAA | + |
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Preference number: 4 (lower is better) Translates to: FHMAGKASGNLTITVEGTCCGPK*ITNHKE Trigger: TTCCTTGTGGTTGGTGATCCATTTGGGGCCACAACA...GGTGCCTTCCACCGTGATTGTTAAGTTTCCTGAGGCCTTCCCAGCCATGTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370109.8 |
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| CDS-3UTR CCA 90 bp | TGTCAGTGGATGTCTATCCACAAGCTTTCCAGCCTGGTCTGCTTTATGTGTACACGTCGGCTCCAACCCTaGCTAAGCCAACACAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: CQWMSIHKLSSLVCFMCTRRLQP*LSQHKV Trigger: CACTTTGTGTTGGCTTAGCCAGGGTTGGAGCCGACG...TGTACACATAAAGCAGACCAGGCTGGAAAGCTTGTGGATAGACATCCACTGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370109.8 |
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| CDS-3UTR GCA 90 bp | TATCATGAGAATAGCATGAGGGAAACTGCCCCCATGATTCAATTACCTACCACATTCCGCAGAAGCAACTaGAAAAGCGCCGGCTCCGTG | + |
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Preference number: 4 (lower is better) Translates to: YHENSMRETAPMIQLPTTFRRSN*KSAGSV Trigger: CACGGAGCCGGCGCTTTTGCAGTTGCTTCTGCGGAA...TGTGGTAGGTAATTGAATCATGGGGGCAGTTTCCCTCATGCTATTCTCATGATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370109.8 |
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| CDS-3UTR GCA 90 bp | CTGTCAGTGGATGTCTATCCACAAGCTTTCCAGCCTGGTCTGCTTTATGTGTACACAATCTCCAGAAGCTaGTGGGCTGCTTGGTTTACA | + |
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Preference number: 4 (lower is better) Translates to: LSVDVYPQAFQPGLLYVYTISRS*WAAWFT Trigger: TGTAAACCAAGCAGCCCAGCAGCTTCTGGAGATTGT...GTACACATAAAGCAGACCAGGCTGGAAAGCTTGTGGATAGACATCCACTGACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370109.8 |
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| CDS-3UTR GCA 90 bp | CCTCTTCACAGGGCGGCAAGAGTGAGAATGAGAGCCAGTAGGGGAAATGCCAGGTTACACAAACATGCATaGATCCAGGTATTAATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PLHRAARVRMRASRGNARLHKHA*IQVLIH Trigger: ATGGATTAATACCTGGATGCATGCATGTTTGTGTAA...CCTGGCATTTCCCCTACTGGCTCTCATTCTCACTCTTGCCGCCCTGTGAAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370109.8 |
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| CDS-3UTR CCA 90 bp | GTGGATGTCTATCCACAAGCTTTCCAGCCTGGTCTGCTTTATGTGTACATCCTGAGCTGCTGGGCTGCTTaGTTTACACTCATATACCGT | + |
|
Preference number: 4 (lower is better) Translates to: VDVYPQAFQPGLLYVYILSCWAA*FTLIYR Trigger: ACGGTATATGAGTGTAAACCAAGCAGCCCAGCAGCT...CAGGATGTACACATAAAGCAGACCAGGCTGGAAAGCTTGTGGATAGACATCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370109.8 |
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| CDS-3UTR CCA 90 bp | TATCATGAGAATAGCATGAGGGAAACTGCCCCCATGATTCAATTACCTACCACACCTGCTGCAATTTTCTaGTCGTCGGCTCCAACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: YHENSMRETAPMIQLPTTPAAIF*SSAPTL Trigger: CAGGGTTGGAGCCGACGACCAGAAAATTGCAGCAGG...TGTGGTAGGTAATTGAATCATGGGGGCAGTTTCCCTCATGCTATTCTCATGATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000342173.11 ENST00000370109.8 ENST00000427040.2 |
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| CDS-3UTR TCA 90 bp | GAGCCAGTAGGGGAAATGCCAGGCACTTATAAAACCATCAGATCTCATGAAAGCCCAGGCCCAACCCGATaGGATAAAGCATTTCAAACT | + |
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Preference number: 4 (lower is better) Translates to: EPVGEMPGTYKTIRSHESPGPTR*DKAFQT Trigger: AGTTTGAAATGCTTTATCTCATCGGGTTGGGCCTGG...GCTTTCATGAGATCTGATGGTTTTATAAGTGCCTGGCATTTCCCCTACTGGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370109.8 |
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| CDS-3UTR GCA 90 bp | ATGGCTGGGAAGGCCTCAGGAAACTTAACAATCACGGTGGAAGGCACCTCTTCAACATTTGCCTTAAAGTaGCTGCTGCAATTTTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: MAGKASGNLTITVEGTSSTFALK*LLQFSG Trigger: ACCAGAAAATTGCAGCAGGCACTTTAAGGCAAATGT...TGAAGAGGTGCCTTCCACCGTGATTGTTAAGTTTCCTGAGGCCTTCCCAGCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370109.8 ENST00000427040.2 |
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| CDS-3UTR GCA 90 bp | GAGAATAGCATGAGGGAAACTGCCCCCATGATTCAATTACCTACCACAACACCTTCCACAGTGCACATTTaGCTTAAAGTGCCTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ENSMRETAPMIQLPTTTPSTVHI*LKVPAA Trigger: TGCAGCAGGCACTTTAAGGCAAATGTGCACTGTGGA...AGGTGTTGTGGTAGGTAATTGAATCATGGGGGCAGTTTCCCTCATGCTATTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000342173.11 ENST00000370109.8 ENST00000427040.2 |
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| CDS-3UTR GCA 90 bp | CATGAGGGAAACTGCCCCCATGATTCAATTACCTACCACAACACCTGGGAATTACTCCCAAGTCCACAGTaGACATTTGCCTTAAAGTGC | + |
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Preference number: 4 (lower is better) Translates to: HEGNCPHDSITYHNTWELLPSPQ*TFALKC Trigger: GCACTTTAAGGCAAATGTGCACTGTGGACTTGGGAG...TAATTCCCAGGTGTTGTGGTAGGTAATTGAATCATGGGGGCAGTTTCCCTCATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000342173.11 ENST00000370109.8 ENST00000427040.2 |
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| CDS-3UTR CCA 90 bp | CTGGGAATTATGAGGATTAAAATTCAAGATGAGACTTGGGTGGGGATACATCCACGTCGGCTCCAACCCTaGCTAAGCCAACACAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LGIMRIKIQDETWVGIHPRRLQP*LSQHKV Trigger: CACTTTGTGTTGGCTTAGCCAGGGTTGGAGCCGACG...TGGATGTATCCCCACCCAAGTCTCATCTTGAATTTTAATCCTCATAATTCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000342173.11 ENST00000370109.8 ENST00000427040.2 |
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| CDS-3UTR CCA 90 bp | CTGGGAATTATGAGGATTAAAATTCAAGATGAGACTTGGGTGGGGATACATCCACCTGCTGCAATTTTCTaGTCGTCGGCTCCAACCCTG | + |
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Preference number: 4 (lower is better) Translates to: LGIMRIKIQDETWVGIHPPAAIF*SSAPTL Trigger: CAGGGTTGGAGCCGACGACCAGAAAATTGCAGCAGG...TGGATGTATCCCCACCCAAGTCTCATCTTGAATTTTAATCCTCATAATTCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000342173.11 ENST00000370109.8 ENST00000427040.2 |
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| CDS-3UTR CCA 90 bp | GATTCTGTCAGTGGATGTCTATCCACAAGCTTTCCAGCCTGGTCTGCTTTATGTCTCCTCGGTAACTGCTaGTTCTTCTCCTCGTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: DSVSGCLSTSFPAWSALCLLGNC*FFSSYS Trigger: AGAATACGAGGAGAAGAACCAGCAGTTACCGAGGAG...ACATAAAGCAGACCAGGCTGGAAAGCTTGTGGATAGACATCCACTGACAGAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370109.8 |
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| CDS-3UTR TCA 90 bp | TTCGACTCACAGTTCCACATGGCTGGGAAGGCCTCAGGAAACTTAACAATCACGGAAACCAAGCATTGTTaGGTCAACTTCTTTTTGGTC | + |
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Preference number: 4 (lower is better) Translates to: FDSQFHMAGKASGNLTITETKHC*VNFFLV Trigger: GACCAAAAAGAAGTTGACTCAACAATGCTTGGTTTC...CGTGATTGTTAAGTTTCCTGAGGCCTTCCCAGCCATGTGGAACTGTGAGTCGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370109.8 |
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| CDS-3UTR TCA 90 bp | CTCACAGTTCCACATGGCTGGGAAGGCCTCAGGAAACTTAACAATCACGGTGGAAAAACTGCTCTTAAATaGTTCTGTCAGTGGATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LTVPHGWEGLRKLNNHGGKTALK*FCQWMS Trigger: AGACATCCACTGACAGAATCATTTAAGAGCAGTTTT...TCCACCGTGATTGTTAAGTTTCCTGAGGCCTTCCCAGCCATGTGGAACTGTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370109.8 |
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| CDS-3UTR GCA 90 bp | GAGAATAGCATGAGGGAAACTGCCCCCATGATTCAATTACCTACCACAACACCTCAGAAGCTGCTGGGCTaGTTGGTTTACACTCATATA | + |
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Preference number: 4 (lower is better) Translates to: ENSMRETAPMIQLPTTTPQKLLG*LVYTHI Trigger: TATATGAGTGTAAACCAAGCAGCCCAGCAGCTTCTG...AGGTGTTGTGGTAGGTAATTGAATCATGGGGGCAGTTTCCCTCATGCTATTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000342173.11 ENST00000370109.8 |
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| CDS-3UTR CCA 90 bp | GATTCTGTCAGTGGATGTCTATCCACAAGCTTTCCAGCCTGGTCTGCTTTATGTGTCAAAGAAGCTTTCTaGTCTCCAAGTGTCTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: DSVSGCLSTSFPAWSALCVKEAF*SPSVCP Trigger: TGGACAGACACTTGGAGACCAGAAAGCTTCTTTGAC...ACATAAAGCAGACCAGGCTGGAAAGCTTGTGGATAGACATCCACTGACAGAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370109.8 |
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| CDS-3UTR CCA 90 bp | ATGAGGATTAAAATTCAAGATGAGACTTGGGTGGGGATACATCCAAACCATATCCGTCGGCTCCAACCCTaGCTAAGCCAACACAAAGTG | + |
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Preference number: 4 (lower is better) Translates to: MRIKIQDETWVGIHPNHIRRLQP*LSQHKV Trigger: CACTTTGTGTTGGCTTAGCCAGGGTTGGAGCCGACG...GATATGGTTTGGATGTATCCCCACCCAAGTCTCATCTTGAATTTTAATCCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000342173.11 ENST00000370109.8 ENST00000427040.2 |
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| CDS-3UTR CCA 90 bp | ATGAGGATTAAAATTCAAGATGAGACTTGGGTGGGGATACATCCAAACCATATCCCTGCTGCAATTTTCTaGTCGTCGGCTCCAACCCTG | + |
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Preference number: 4 (lower is better) Translates to: MRIKIQDETWVGIHPNHIPAAIF*SSAPTL Trigger: CAGGGTTGGAGCCGACGACCAGAAAATTGCAGCAGG...GATATGGTTTGGATGTATCCCCACCCAAGTCTCATCTTGAATTTTAATCCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000342173.11 ENST00000370109.8 ENST00000427040.2 |
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| CDS-3UTR CCA 90 bp | CATGAGGGAAACTGCCCCCATGATTCAATTACCTACCACAACACCTGGGAATTAGATCAAGGAATGCAATaGTTCTCCCAAGTCCACAGT | + |
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Preference number: 4 (lower is better) Translates to: HEGNCPHDSITYHNTWELDQGMQ*FSQVHS Trigger: ACTGTGGACTTGGGAGAACCATTGCATTCCTTGATC...TAATTCCCAGGTGTTGTGGTAGGTAATTGAATCATGGGGGCAGTTTCCCTCATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000342173.11 ENST00000370109.8 ENST00000427040.2 |
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| CDS-3UTR CCA 90 bp | CAGTTCCACATGGCTGGGAAGGCCTCAGGAAACTTAACAATCACGGTGGAAGGCAGCTATTTTCTGGTATaGAAAACAGACTTAGCATCT | + |
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Preference number: 4 (lower is better) Translates to: QFHMAGKASGNLTITVEGSYFLV*KTDLAS Trigger: AGATGCTAAGTCTGTTTTCCATACCAGAAAATAGCT...GCCTTCCACCGTGATTGTTAAGTTTCCTGAGGCCTTCCCAGCCATGTGGAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370109.8 ENST00000427040.2 |
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| CDS-3UTR CCA 90 bp | AATAGCATGAGGGAAACTGCCCCCATGATTCAATTACCTACCACAACACCTGGGACAAGCTTTCCAGCCTaGTCTGCTTTATGTGTACAT | + |
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Preference number: 4 (lower is better) Translates to: NSMRETAPMIQLPTTTPGTSFPA*SALCVH Trigger: ATGTACACATAAAGCAGACCAGGCTGGAAAGCTTGT...CCCAGGTGTTGTGGTAGGTAATTGAATCATGGGGGCAGTTTCCCTCATGCTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370109.8 |
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| CDS-3UTR TCA 90 bp | TTTAATTTTCGACTCACAGTTCCACATGGCTGGGAAGGCCTCAGGAAACTTAACAAAGCATTTCAAACTTaGGGAGAAGAGAGACCGCTG | + |
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Preference number: 4 (lower is better) Translates to: FNFRLTVPHGWEGLRKLNKAFQT*GEERPL Trigger: CAGCGGTCTCTCTTCTCCTCAAGTTTGAAATGCTTT...GTTAAGTTTCCTGAGGCCTTCCCAGCCATGTGGAACTGTGAGTCGAAAATTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370109.8 |
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| CDS-3UTR TCA 90 bp | TATCATGAGAATAGCATGAGGGAAACTGCCCCCATGATTCAATTACCTACCACACCAGGCCCAACCCGATaGGATAAAGCATTTCAAACT | + |
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Preference number: 4 (lower is better) Translates to: YHENSMRETAPMIQLPTTPGPTR*DKAFQT Trigger: AGTTTGAAATGCTTTATCTCATCGGGTTGGGCCTGG...TGTGGTAGGTAATTGAATCATGGGGGCAGTTTCCCTCATGCTATTCTCATGATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000342173.11 ENST00000370109.8 |
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| CDS-3UTR GCA 90 bp | AATAGCATGAGGGAAACTGCCCCCATGATTCAATTACCTACCACAACACCTGGGACATTTGCCTTAAAGTaGCTGCTGCAATTTTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: NSMRETAPMIQLPTTTPGTFALK*LLQFSG Trigger: ACCAGAAAATTGCAGCAGGCACTTTAAGGCAAATGT...CCCAGGTGTTGTGGTAGGTAATTGAATCATGGGGGCAGTTTCCCTCATGCTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000342173.11 ENST00000370109.8 ENST00000427040.2 |
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| CDS-3UTR GCA 90 bp | CTGTCAGTGGATGTCTATCCACAAGCTTTCCAGCCTGGTCTGCTTTATGTGTACACATTTGCCTTAAAGTaGCTGCTGCAATTTTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: LSVDVYPQAFQPGLLYVYTFALK*LLQFSG Trigger: ACCAGAAAATTGCAGCAGGCACTTTAAGGCAAATGT...GTACACATAAAGCAGACCAGGCTGGAAAGCTTGTGGATAGACATCCACTGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370109.8 |
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| CDS-3UTR CCA 90 bp | TATCATGAGAATAGCATGAGGGAAACTGCCCCCATGATTCAATTACCTACCACATGTTGTGGCCCCAAATaGATCACCAACCACAAGGAA | + |
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Preference number: 4 (lower is better) Translates to: YHENSMRETAPMIQLPTTCCGPK*ITNHKE Trigger: TTCCTTGTGGTTGGTGATCCATTTGGGGCCACAACA...TGTGGTAGGTAATTGAATCATGGGGGCAGTTTCCCTCATGCTATTCTCATGATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000342173.11 ENST00000370109.8 |
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| CDS-3UTR CCA 90 bp | TATCATGAGAATAGCATGAGGGAAACTGCCCCCATGATTCAATTACCTACCACAAGCTGCTGGGCTGCTTaGTTTACACTCATATACCGT | + |
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Preference number: 4 (lower is better) Translates to: YHENSMRETAPMIQLPTTSCWAA*FTLIYR Trigger: ACGGTATATGAGTGTAAACCAAGCAGCCCAGCAGCT...TGTGGTAGGTAATTGAATCATGGGGGCAGTTTCCCTCATGCTATTCTCATGATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000342173.11 ENST00000370109.8 |
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| CDS-3UTR CCA 90 bp | CAACACCTGGGAATTATGAGGATTAAAATTCAAGATGAGACTTGGGTGGGGATAATCTCCAGAAGCTGCTaGGCTGCTTGGTTTACACTC | + |
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Preference number: 4 (lower is better) Translates to: QHLGIMRIKIQDETWVGIISRSC*AAWFTL Trigger: GAGTGTAAACCAAGCAGCCCAGCAGCTTCTGGAGAT...TATCCCCACCCAAGTCTCATCTTGAATTTTAATCCTCATAATTCCCAGGTGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000342173.11 ENST00000370109.8 |
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| CDS-3UTR TCA 90 bp | AGGTTTAATTTTCGACTCACAGTTCCACATGGCTGGGAAGGCCTCAGGAAACTTATGTTCAAAGTCCATTaGTGCTTTGAGATTCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: RFNFRLTVPHGWEGLRKLMFKVH*CFEILS Trigger: GCTCAGAATCTCAAAGCATCAATGGACTTTGAACAT...AAGTTTCCTGAGGCCTTCCCAGCCATGTGGAACTGTGAGTCGAAAATTAAACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370109.8 ENST00000427040.2 |
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| CDS-3UTR TCA 90 bp | TATCATGAGAATAGCATGAGGGAAACTGCCCCCATGATTCAATTACCTACCACAATTCTCACACTGCTATaGAGAAATACCCGAGACTGG | + |
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Preference number: 4 (lower is better) Translates to: YHENSMRETAPMIQLPTTILTLL*RNTRDW Trigger: CCAGTCTCGGGTATTTCTTCATAGCAGTGTGAGAAT...TGTGGTAGGTAATTGAATCATGGGGGCAGTTTCCCTCATGCTATTCTCATGATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370109.8 |
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| CDS-3UTR TCA 90 bp | AGGTTTAATTTTCGACTCACAGTTCCACATGGCTGGGAAGGCCTCAGGAAACTTCTCCTCGGTAACTGTTaGTTAGATTTTCCAAAGACT | + |
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Preference number: 4 (lower is better) Translates to: RFNFRLTVPHGWEGLRKLLLGNC*LDFPKT Trigger: AGTCTTTGGAAAATCTAATCAACAGTTACCGAGGAG...AAGTTTCCTGAGGCCTTCCCAGCCATGTGGAACTGTGAGTCGAAAATTAAACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427040.2 |
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| CDS-3UTR GCA 90 bp | CAACACCTGGGAATTATGAGGATTAAAATTCAAGATGAGACTTGGGTGGGGATATCCACAGTGCACATTTaGCTTAAAGTGCCTGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: QHLGIMRIKIQDETWVGISTVHI*LKVPAA Trigger: TGCAGCAGGCACTTTAAGGCAAATGTGCACTGTGGA...TATCCCCACCCAAGTCTCATCTTGAATTTTAATCCTCATAATTCCCAGGTGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000342173.11 ENST00000370109.8 ENST00000427040.2 |
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| CDS-3UTR GCA 90 bp | CAACACCTGGGAATTATGAGGATTAAAATTCAAGATGAGACTTGGGTGGGGATACTCCCAAGTCCACAGTaGACATTTGCCTTAAAGTGC | + |
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Preference number: 4 (lower is better) Translates to: QHLGIMRIKIQDETWVGILPSPQ*TFALKC Trigger: GCACTTTAAGGCAAATGTGCACTGTGGACTTGGGAG...TATCCCCACCCAAGTCTCATCTTGAATTTTAATCCTCATAATTCCCAGGTGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000342173.11 ENST00000370109.8 ENST00000427040.2 |
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| CDS-3UTR GCA 90 bp | GAGAATAGCATGAGGGAAACTGCCCCCATGATTCAATTACCTACCACAACACCTAATCCATTCTCACACTaGTATGAAGAAATACCCGAG | + |
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Preference number: 4 (lower is better) Translates to: ENSMRETAPMIQLPTTTPNPFSH*YEEIPE Trigger: CTCGGGTATTTCTTCATAGCAGTGTGAGAATGGATT...AGGTGTTGTGGTAGGTAATTGAATCATGGGGGCAGTTTCCCTCATGCTATTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370109.8 |
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| CDS-3UTR CCA 90 bp | CTTATAAAACCATCAGATCTCATGAAAGCTCACTATCATGAGAATAGCATGAGGACTCACAGTTCCACATaGCTGGGAAGGCCTCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: LIKPSDLMKAHYHENSMRTHSST*LGRPQE Trigger: TTCCTGAGGCCTTCCCAGCCATGTGGAACTGTGAGT...CCTCATGCTATTCTCATGATAGTGAGCTTTCATGAGATCTGATGGTTTTATAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370109.8 ENST00000427040.2 |
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| CDS-3UTR TCA 90 bp | CTACCACAACACCTGGGAATTATGAGGATTAAAATTCAAGATGAGACTTGGGTGAAAGCATTTCAAACTTaGGGAGAAGAGAGACCGCTG | + |
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Preference number: 4 (lower is better) Translates to: LPQHLGIMRIKIQDETWVKAFQT*GEERPL Trigger: CAGCGGTCTCTCTTCTCCTCAAGTTTGAAATGCTTT...CACCCAAGTCTCATCTTGAATTTTAATCCTCATAATTCCCAGGTGTTGTGGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000342173.11 ENST00000370109.8 |
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| CDS-3UTR TCA 90 bp | CATGAGGGAAACTGCCCCCATGATTCAATTACCTACCACAACACCTGGGAATTAGGAATGCAACATCACTaGTATCAGCATCCTTTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: HEGNCPHDSITYHNTWELGMQHH*YQHPLK Trigger: TTTTAAAGGATGCTGATATCAGTGATGTTGCATTCC...TAATTCCCAGGTGTTGTGGTAGGTAATTGAATCATGGGGGCAGTTTCCCTCATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000342173.11 ENST00000370109.8 |
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| CDS-3UTR TCA 90 bp | TCTGTCAGTGGATGTCTATCCACAAGCTTTCCAGCCTGGTCTGCTTTATGTGTAAGATCTTCCTTCCCTTaGTTAGATTTTCCAAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: SVSGCLSTSFPAWSALCVRSSFP*LDFPKT Trigger: AGTCTTTGGAAAATCTAATCAAGGGAAGGAAGATCT...TACACATAAAGCAGACCAGGCTGGAAAGCTTGTGGATAGACATCCACTGACAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370109.8 |
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| CDS-3UTR GCA 90 bp | TTTCGACTCACAGTTCCACATGGCTGGGAAGGCCTCAGGAAACTTAACAATCACAGATTTTCCAAAGACTaGTCCTTTACTTTGATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FRLTVPHGWEGLRKLNNHRFSKD*SFTLMS Trigger: AGACATCAAAGTAAAGGAGCAGTCTTTGGAAAATCT...GTGATTGTTAAGTTTCCTGAGGCCTTCCCAGCCATGTGGAACTGTGAGTCGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370109.8 |
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| CDS-3UTR GCA 90 bp | CAACACCTGGGAATTATGAGGATTAAAATTCAAGATGAGACTTGGGTGGGGATAGTGATGATCAAGGAATaGAATGGTTCTCCCAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QHLGIMRIKIQDETWVGIVMIKE*NGSPKS Trigger: GGACTTGGGAGAACCATTGCATTCCTTGATCATCAC...TATCCCCACCCAAGTCTCATCTTGAATTTTAATCCTCATAATTCCCAGGTGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000342173.11 ENST00000370109.8 ENST00000427040.2 |
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| CDS-3UTR CCA 90 bp | CTACCACAACACCTGGGAATTATGAGGATTAAAATTCAAGATGAGACTTGGGTGGTCAAAGAAGCTTTCTaGTCTCCAAGTGTCTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPQHLGIMRIKIQDETWVVKEAF*SPSVCP Trigger: TGGACAGACACTTGGAGACCAGAAAGCTTCTTTGAC...CACCCAAGTCTCATCTTGAATTTTAATCCTCATAATTCCCAGGTGTTGTGGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000342173.11 ENST00000370109.8 |
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| CDS-3UTR CCA 90 bp | CTGGGAATTATGAGGATTAAAATTCAAGATGAGACTTGGGTGGGGATACATCCATGTCTCCTCGGTAACTaGTTCTTCTCCTCGTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: LGIMRIKIQDETWVGIHPCLLGN*FFSSYS Trigger: AGAATACGAGGAGAAGAACCAGTTACCGAGGAGACA...TGGATGTATCCCCACCCAAGTCTCATCTTGAATTTTAATCCTCATAATTCCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342173.11 |
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| CDS-3UTR CCA 90 bp | CAACACCTGGGAATTATGAGGATTAAAATTCAAGATGAGACTTGGGTGGGGATAGATCAAGGAATGCAATaGTTCTCCCAAGTCCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: QHLGIMRIKIQDETWVGIDQGMQ*FSQVHS Trigger: ACTGTGGACTTGGGAGAACCATTGCATTCCTTGATC...TATCCCCACCCAAGTCTCATCTTGAATTTTAATCCTCATAATTCCCAGGTGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000342173.11 ENST00000370109.8 ENST00000427040.2 |
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| CDS-3UTR TCA 90 bp | TATCATGAGAATAGCATGAGGGAAACTGCCCCCATGATTCAATTACCTACCACAATGTTCAAAGTCCATTaGTGCTTTGAGATTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YHENSMRETAPMIQLPTTMFKVH*CFEILS Trigger: GCTCAGAATCTCAAAGCATCAATGGACTTTGAACAT...TGTGGTAGGTAATTGAATCATGGGGGCAGTTTCCCTCATGCTATTCTCATGATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000342173.11 ENST00000370109.8 ENST00000427040.2 |
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| CDS-3UTR GCA 90 bp | ATTATGAGGATTAAAATTCAAGATGAGACTTGGGTGGGGATACATCCAAACCATACAATCTCCAGAAGCTaGTGGGCTGCTTGGTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: IMRIKIQDETWVGIHPNHTISRS*WAAWFT Trigger: TGTAAACCAAGCAGCCCAGCAGCTTCTGGAGATTGT...ATGGTTTGGATGTATCCCCACCCAAGTCTCATCTTGAATTTTAATCCTCATAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000342173.11 ENST00000370109.8 |
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| CDS-3UTR GCA 90 bp | ATGAGGATTAAAATTCAAGATGAGACTTGGGTGGGGATACATCCAAACCATATCGTGATGATCAAGGAATaGAATGGTTCTCCCAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: MRIKIQDETWVGIHPNHIVMIKE*NGSPKS Trigger: GGACTTGGGAGAACCATTGCATTCCTTGATCATCAC...GATATGGTTTGGATGTATCCCCACCCAAGTCTCATCTTGAATTTTAATCCTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000342173.11 ENST00000370109.8 ENST00000427040.2 |
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| CDS-3UTR CCA 90 bp | GAGAATAGCATGAGGGAAACTGCCCCCATGATTCAATTACCTACCACAACACCTAGCTATTTTCTGGTATaGAAAACAGACTTAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: ENSMRETAPMIQLPTTTPSYFLV*KTDLAS Trigger: AGATGCTAAGTCTGTTTTCCATACCAGAAAATAGCT...AGGTGTTGTGGTAGGTAATTGAATCATGGGGGCAGTTTCCCTCATGCTATTCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000342173.11 ENST00000370109.8 ENST00000427040.2 |
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| CDS-3UTR GCA 90 bp | TTTAATTTTCGACTCACAGTTCCACATGGCTGGGAAGGCCTCAGGAAACTTAACAGTAAACATAATGTGTaGATGCCATTTTGTCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FNFRLTVPHGWEGLRKLNSKHNV*MPFCLF Trigger: GAACAGACAAAATGGCATGCACACATTATGTTTACT...GTTAAGTTTCCTGAGGCCTTCCCAGCCATGTGGAACTGTGAGTCGAAAATTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370109.8 |
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| CDS-3UTR GCA 90 bp | CTTATAAAACCATCAGATCTCATGAAAGCTCACTATCATGAGAATAGCATGAGGGTGATGATCAAGGAATaGAATGGTTCTCCCAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LIKPSDLMKAHYHENSMRVMIKE*NGSPKS Trigger: GGACTTGGGAGAACCATTGCATTCCTTGATCATCAC...CCTCATGCTATTCTCATGATAGTGAGCTTTCATGAGATCTGATGGTTTTATAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370109.8 ENST00000427040.2 |
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| CDS-3UTR CCA 90 bp | CAACACCTGGGAATTATGAGGATTAAAATTCAAGATGAGACTTGGGTGGGGATATACACTCATATACCGTaGAGGTTCATAGATCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QHLGIMRIKIQDETWVGIYTHIP*RFIDLP Trigger: AGGAAGATCTATGAACCTCCACGGTATATGAGTGTA...TATCCCCACCCAAGTCTCATCTTGAATTTTAATCCTCATAATTCCCAGGTGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000342173.11 ENST00000370109.8 |
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| CDS-3UTR CCA 90 bp | ATTATGAGGATTAAAATTCAAGATGAGACTTGGGTGGGGATACATCCAAACCATGATCAAGGAATGCAATaGTTCTCCCAAGTCCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: IMRIKIQDETWVGIHPNHDQGMQ*FSQVHS Trigger: ACTGTGGACTTGGGAGAACCATTGCATTCCTTGATC...ATGGTTTGGATGTATCCCCACCCAAGTCTCATCTTGAATTTTAATCCTCATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000342173.11 ENST00000370109.8 ENST00000427040.2 |
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| CDS-3UTR TCA 90 bp | ATGAGGATTAAAATTCAAGATGAGACTTGGGTGGGGATACATCCAAACCATATCGATGCTTTGAGATTCTaGGCTATTTTCTGGTATGGA | + |
|
Preference number: 4 (lower is better) Translates to: MRIKIQDETWVGIHPNHIDALRF*AIFWYG Trigger: TCCATACCAGAAAATAGCTCAGAATCTCAAAGCATC...GATATGGTTTGGATGTATCCCCACCCAAGTCTCATCTTGAATTTTAATCCTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000342173.11 ENST00000370109.8 ENST00000427040.2 |
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| CDS-3UTR TCA 90 bp | ATGAGGATTAAAATTCAAGATGAGACTTGGGTGGGGATACATCCAAACCATATCAGATCTTCCTTCCCTTaGTTAGATTTTCCAAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: MRIKIQDETWVGIHPNHIRSSFP*LDFPKT Trigger: AGTCTTTGGAAAATCTAATCAAGGGAAGGAAGATCT...GATATGGTTTGGATGTATCCCCACCCAAGTCTCATCTTGAATTTTAATCCTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000342173.11 ENST00000370109.8 |
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| CDS-3UTR TCA 90 bp | CTTATAAAACCATCAGATCTCATGAAAGCTCACTATCATGAGAATAGCATGAGGGATGCTTTGAGATTCTaGGCTATTTTCTGGTATGGA | + |
|
Preference number: 4 (lower is better) Translates to: LIKPSDLMKAHYHENSMRDALRF*AIFWYG Trigger: TCCATACCAGAAAATAGCTCAGAATCTCAAAGCATC...CCTCATGCTATTCTCATGATAGTGAGCTTTCATGAGATCTGATGGTTTTATAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370109.8 ENST00000427040.2 |
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| CDS-3UTR TCA 90 bp | CTTATAAAACCATCAGATCTCATGAAAGCTCACTATCATGAGAATAGCATGAGGATGTTCAAAGTCCATTaGTGCTTTGAGATTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LIKPSDLMKAHYHENSMRMFKVH*CFEILS Trigger: GCTCAGAATCTCAAAGCATCAATGGACTTTGAACAT...CCTCATGCTATTCTCATGATAGTGAGCTTTCATGAGATCTGATGGTTTTATAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370109.8 ENST00000427040.2 |
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| CDS-3UTR GCA 90 bp | CTGGGAATTATGAGGATTAAAATTCAAGATGAGACTTGGGTGGGGATACATCCAAGTAAACATAATGTGTaGATGCCATTTTGTCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGIMRIKIQDETWVGIHPSKHNV*MPFCLF Trigger: GAACAGACAAAATGGCATGCACACATTATGTTTACT...TGGATGTATCCCCACCCAAGTCTCATCTTGAATTTTAATCCTCATAATTCCCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000342173.11 ENST00000370109.8 |
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| CDS-3UTR GCA 90 bp | CTGGGAATTATGAGGATTAAAATTCAAGATGAGACTTGGGTGGGGATACATCCAAGATTTTCCAAAGACTaGTCCTTTACTTTGATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LGIMRIKIQDETWVGIHPRFSKD*SFTLMS Trigger: AGACATCAAAGTAAAGGAGCAGTCTTTGGAAAATCT...TGGATGTATCCCCACCCAAGTCTCATCTTGAATTTTAATCCTCATAATTCCCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000342173.11 ENST00000370109.8 |
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| CDS-3UTR CCA 90 bp | CTTATAAAACCATCAGATCTCATGAAAGCTCACTATCATGAGAATAGCATGAGGAGCTATTTTCTGGTATaGAAAACAGACTTAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LIKPSDLMKAHYHENSMRSYFLV*KTDLAS Trigger: AGATGCTAAGTCTGTTTTCCATACCAGAAAATAGCT...CCTCATGCTATTCTCATGATAGTGAGCTTTCATGAGATCTGATGGTTTTATAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000370109.8 ENST00000427040.2 |
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| CDS GCA 90 bp | GGCTGCGGAGACCAGAGCCCGGCTCCACTGAAGAAACCCGCCGGCTaGTGGGGCAGGGCGGCGAAAGGTCAGTCGGCCGAGAGGAGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: GCGDQSPAPLKKPAG*WGRAAKGQSAERSP Trigger: CGGACTCCTCTCGGCCGACTGACCTTTCGCCGCCCTGCCCCAGCAGCCGGCGGGTTTCTTCAGTGGAGCCGGGCTCTGGTCTCCGCAGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488789.5 |
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| CDS TCA 90 bp | GGGCTAGCGGGCTACTGGGCTGCGGAGACCAGAGCCCGGCTCCACTaGAGAAACCCGCCGGCTGCTGGGGCAGGGCGGCGAAAGGTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: GLAGYWAAETRARLH*RNPPAAGAGRRKVS Trigger: ACTGACCTTTCGCCGCCCTGCCCCAGCAGCCGGCGGGTTTCTTCAGTGGAGCCGGGCTCTGGTCTCCGCAGCCCAGTAGCCCGCTAGCCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488789.5 |
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| CDS CCA 90 bp | TGCGGAGACCAGAGCCCGGCTCCACTGAAGAAACCCGCCGGCTGCTaGGGCAGGGCGGCGAAAGGTCAGTCGGCCGAGAGGAGTCCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: CGDQSPAPLKKPAGC*GRAAKGQSAERSPW Trigger: CCACGGACTCCTCTCGGCCGACTGACCTTTCGCCGCCCTGCCCCAGCAGCCGGCGGGTTTCTTCAGTGGAGCCGGGCTCTGGTCTCCGCA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000488789.5 |
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| CDS GCA 90 bp | ACTTTACGACTAGCGGGAGGGGGCCGGGCTAGCGGGCTACTGGGCTaGGGAGACCAGAGCCCGGCTCCACTGAAGAAACCCGCCGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TLRLAGGGRASGLLG*GDQSPAPLKKPAGC Trigger: GCAGCCGGCGGGTTTCTTCAGTGGAGCCGGGCTCTGGTCTCCGCAGCCCAGTAGCCCGCTAGCCCGGCCCCCTCCCGCTAGTCGTAAAGT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000488789.5 |
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| CDS CCA 90 bp | TGCTGGGGCAGGGCGGCGAAAGGTCAGTCGGCCGAGAGGAGTCCGTaGAGCCACCGTTTCATAGCCTCAGGGAAAGGATCGGGCGTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: CWGRAAKGQSAERSP*SHRFIASGKGSGVL Trigger: GAGCACGCCCGATCCTTTCCCTGAGGCTATGAAACGGTGGCTCCACGGACTCCTCTCGGCCGACTGACCTTTCGCCGCCCTGCCCCAGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488789.5 |
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| CDS GCA 90 bp | GAGGAGAAGAGAGACTACGGTGCCGCAAAATGCTGGTGCCTTTACTaGACTTTACGACTAGCGGGAGGGGGCCGGGCTAGCGGGCTACTG | + |
|
Preference number: 5 (lower is better) Translates to: EEKRDYGAAKCWCLY*TLRLAGGGRASGLL Trigger: CAGTAGCCCGCTAGCCCGGCCCCCTCCCGCTAGTCGTAAAGTGCAGTAAAGGCACCAGCATTTTGCGGCACCGTAGTCTCTCTTCTCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000488789.5 |
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| CDS CCA 90 bp | AAGTCCACAGTGCACATTTGCCTTAAAGTGCCTGCTGCAATTTTCTaGTCGTCGGCTCCAACCCTGGCTAAGCCAACACAAAGTGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KSTVHICLKVPAAIF*SSAPTLAKPTQSVS Trigger: GGAGACACTTTGTGTTGGCTTAGCCAGGGTTGGAGCCGACGACCAGAAAATTGCAGCAGGCACTTTAAGGCAAATGTGCACTGTGGACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000342173.11 ENST00000370105.7 ENST00000370109.8 ENST00000427040.2 ENST00000464270.5 ENST00000466807.5 ENST00000477293.5 ENST00000481871.5 ENST00000488176.1 ENST00000488789.5 ENST00000490732.5 ENST00000492067.5 ENST00000498372.5 |
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| CDS-3UTR CAA 90 bp | GAGCCAGTAGGGGAAATGCCAGGCACTTATAAAACCATCAGATCTCATGAAAGCTTGACTGTGATGTCCTaGGCATCTCCCAGGCCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: EPVGEMPGTYKTIRSHESLTVMS*ASPRPN Trigger: GTTGGGCCTGGGAGATGCCAAGGACATCACAGTCAA...GCTTTCATGAGATCTGATGGTTTTATAAGTGCCTGGCATTTCCCCTACTGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370109.8 |
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| CDS-3UTR CAA 90 bp | AATAGCATGAGGGAAACTGCCCCCATGATTCAATTACCTACCACAACACCTGGGGCATCTCCATCTCCATaGGATGTATGCTGCCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: NSMRETAPMIQLPTTTPGASPSP*DVCCLL Trigger: CAGGAGGCAGCATACATCCAATGGAGATGGAGATGC...CCCAGGTGTTGTGGTAGGTAATTGAATCATGGGGGCAGTTTCCCTCATGCTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000342173.11 ENST00000370109.8 ENST00000427040.2 |
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| CDS GCA 90 bp | ATGATCAAGGAATGCAATGGTTCTCCCAAGTCCACAGTGCACATTTaGCTTAAAGTGCCTGCTGCAATTTTCTGGTCGTCGGCTCCAACC | + |
|
Preference number: 5 (lower is better) Translates to: MIKECNGSPKSTVHI*LKVPAAIFWSSAPT Trigger: GGTTGGAGCCGACGACCAGAAAATTGCAGCAGGCACTTTAAGGCAAATGTGCACTGTGGACTTGGGAGAACCATTGCATTCCTTGATCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000342173.11 ENST00000370105.7 ENST00000370109.8 ENST00000427040.2 ENST00000464270.5 ENST00000466807.5 ENST00000477293.5 ENST00000481871.5 ENST00000488176.1 ENST00000488789.5 ENST00000490732.5 ENST00000492067.5 ENST00000498372.5 |
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| CDS-3UTR CAA 90 bp | CATGAGGGAAACTGCCCCCATGATTCAATTACCTACCACAACACCTGGGAATTAACAACTTCCAGGCCCTaGACTGTGATGTCCTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: HEGNCPHDSITYHNTWELTTSRP*TVMSLA Trigger: TGCCAAGGACATCACAGTCAAGGGCCTGGAAGTTGT...TAATTCCCAGGTGTTGTGGTAGGTAATTGAATCATGGGGGCAGTTTCCCTCATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000342173.11 ENST00000370109.8 |
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| CDS-3UTR CAA 90 bp | CTGGGAATTATGAGGATTAAAATTCAAGATGAGACTTGGGTGGGGATACATCCATTGACTGTGATGTCCTaGGCATCTCCCAGGCCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: LGIMRIKIQDETWVGIHPLTVMS*ASPRPN Trigger: GTTGGGCCTGGGAGATGCCAAGGACATCACAGTCAA...TGGATGTATCCCCACCCAAGTCTCATCTTGAATTTTAATCCTCATAATTCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000342173.11 ENST00000370109.8 |
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| CDS-3UTR CAA 90 bp | TTTCGACTCACAGTTCCACATGGCTGGGAAGGCCTCAGGAAACTTAACAATCACGAATTCCCAGCTTTGTaGCTCTTAGAACAAGATCAC | + |
|
Preference number: 5 (lower is better) Translates to: FRLTVPHGWEGLRKLNNHEFPAL*LLEQDH Trigger: GTGATCTTGTTCTAAGAGCAACAAAGCTGGGAATTC...GTGATTGTTAAGTTTCCTGAGGCCTTCCCAGCCATGTGGAACTGTGAGTCGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370109.8 |
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| CDS-3UTR CAA 90 bp | GACCTGTTTGTTACACAAACATGCATGCATCCAGGTATTAATCCATTCTCACACGCATCTCCATCTCCATaGGATGTATGCTGCCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: DLFVTQTCMHPGINPFSHASPSP*DVCCLL Trigger: CAGGAGGCAGCATACATCCAATGGAGATGGAGATGC...GTGTGAGAATGGATTAATACCTGGATGCATGCATGTTTGTGTAACAAACAGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370109.8 |
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| CDS-3UTR CAA 90 bp | CTACCACAACACCTGGGAATTATGAGGATTAAAATTCAAGATGAGACTTGGGTGGCATCTCCATCTCCATaGGATGTATGCTGCCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LPQHLGIMRIKIQDETWVASPSP*DVCCLL Trigger: CAGGAGGCAGCATACATCCAATGGAGATGGAGATGC...CACCCAAGTCTCATCTTGAATTTTAATCCTCATAATTCCCAGGTGTTGTGGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000342173.11 ENST00000370109.8 ENST00000427040.2 |
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| CDS-3UTR CAA 90 bp | ATGAGGATTAAAATTCAAGATGAGACTTGGGTGGGGATACATCCAAACCATATCACAACTTCCAGGCCCTaGACTGTGATGTCCTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: MRIKIQDETWVGIHPNHITTSRP*TVMSLA Trigger: TGCCAAGGACATCACAGTCAAGGGCCTGGAAGTTGT...GATATGGTTTGGATGTATCCCCACCCAAGTCTCATCTTGAATTTTAATCCTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000342173.11 ENST00000370109.8 |
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| CDS-3UTR CAA 90 bp | GATTCTGTCAGTGGATGTCTATCCACAAGCTTTCCAGCCTGGTCTGCTTTATGTAGCCAAAAGACCTGTTaGTTACACAAACATGCATGC | + |
|
Preference number: 5 (lower is better) Translates to: DSVSGCLSTSFPAWSALCSQKTC*LHKHAC Trigger: GCATGCATGTTTGTGTAACAAACAGGTCTTTTGGCT...ACATAAAGCAGACCAGGCTGGAAAGCTTGTGGATAGACATCCACTGACAGAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370109.8 |
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| CDS GCA 90 bp | TCCTCGTATTCTTTGATTTTGAACAATCTCCAGAAGCTGCTGGGCTaGTTGGTTTACACTCATATACCGTGGAGGTTCATAGATCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SSYSLILNNLQKLLG*LVYTHIPWRFIDLP Trigger: AGGAAGATCTATGAACCTCCACGGTATATGAGTGTAAACCAAGCAGCCCAGCAGCTTCTGGAGATTGTTCAAAATCAAAGAATACGAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000342173.11 ENST00000370105.7 ENST00000370109.8 ENST00000464270.5 ENST00000466807.5 ENST00000477293.5 ENST00000488176.1 ENST00000488789.5 ENST00000490732.5 ENST00000498372.5 |
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| CDS-3UTR CAA 90 bp | ATTATGAGGATTAAAATTCAAGATGAGACTTGGGTGGGGATACATCCAAACCATCAAGATCACTGTGTGTaGTGGCCCCAAATGGATCAC | + |
|
Preference number: 5 (lower is better) Translates to: IMRIKIQDETWVGIHPNHQDHCV*WPQMDH Trigger: GTGATCCATTTGGGGCCACAACACACAGTGATCTTG...ATGGTTTGGATGTATCCCCACCCAAGTCTCATCTTGAATTTTAATCCTCATAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000342173.11 ENST00000370109.8 |
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| CDS-3UTR CAA 90 bp | GATTCTGTCAGTGGATGTCTATCCACAAGCTTTCCAGCCTGGTCTGCTTTATGTTTCTCCTCGTATTCTTaGATTTTGAACAATCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: DSVSGCLSTSFPAWSALCFSSYS*ILNNLQ Trigger: CTGGAGATTGTTCAAAATCAAAGAATACGAGGAGAA...ACATAAAGCAGACCAGGCTGGAAAGCTTGTGGATAGACATCCACTGACAGAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370109.8 |
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| CDS-3UTR CAA 90 bp | CTACCACAACACCTGGGAATTATGAGGATTAAAATTCAAGATGAGACTTGGGTGGAATTCCCAGCTTTGTaGCTCTTAGAACAAGATCAC | + |
|
Preference number: 5 (lower is better) Translates to: LPQHLGIMRIKIQDETWVEFPAL*LLEQDH Trigger: GTGATCTTGTTCTAAGAGCAACAAAGCTGGGAATTC...CACCCAAGTCTCATCTTGAATTTTAATCCTCATAATTCCCAGGTGTTGTGGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000342173.11 ENST00000370109.8 |
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| CDS-3UTR CAA 90 bp | TATCATGAGAATAGCATGAGGGAAACTGCCCCCATGATTCAATTACCTACCACAAAGGAATTCCCAGCTTaGTTGCTCTTAGAACAAGAT | + |
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Preference number: 5 (lower is better) Translates to: YHENSMRETAPMIQLPTTKEFPA*LLLEQD Trigger: ATCTTGTTCTAAGAGCAACAAAGCTGGGAATTCCTT...TGTGGTAGGTAATTGAATCATGGGGGCAGTTTCCCTCATGCTATTCTCATGATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000342173.11 ENST00000370109.8 |
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| CDS-3UTR CAA 90 bp | GACCTGTTTGTTACACAAACATGCATGCATCCAGGTATTAATCCATTCTCACACAAGGAATTCCCAGCTTaGTTGCTCTTAGAACAAGAT | + |
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Preference number: 5 (lower is better) Translates to: DLFVTQTCMHPGINPFSHKEFPA*LLLEQD Trigger: ATCTTGTTCTAAGAGCAACAAAGCTGGGAATTCCTT...GTGTGAGAATGGATTAATACCTGGATGCATGCATGTTTGTGTAACAAACAGGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370109.8 |
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| CDS-3UTR CAA 90 bp | ATGAGGATTAAAATTCAAGATGAGACTTGGGTGGGGATACATCCAAACCATATCTTCTCCTCGTATTCTTaGATTTTGAACAATCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: MRIKIQDETWVGIHPNHIFSSYS*ILNNLQ Trigger: CTGGAGATTGTTCAAAATCAAAGAATACGAGGAGAA...GATATGGTTTGGATGTATCCCCACCCAAGTCTCATCTTGAATTTTAATCCTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000342173.11 ENST00000370109.8 |
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| CDS TCA 72 bp | GGCTACTGGGCTGCGGAGACCAGAGCCCGGCTCCACTaGAGAAACCCGCCGGCTGCTGGGGCAGGGCGGCGA | + |
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Preference number: 6 (lower is better) Translates to: GYWAAETRARLH*RNPPAAGAGRR Trigger: TCGCCGCCCTGCCCCAGCAGCCGGCGGGTTTCTTCAGTGGAGCCGGGCTCTGGTCTCCGCAGCCCAGTAGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488789.5 |
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| CDS GCA 72 bp | GACCAGAGCCCGGCTCCACTGAAGAAACCCGCCGGCTaGTGGGGCAGGGCGGCGAAAGGTCAGTCGGCCGAG | + |
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Preference number: 6 (lower is better) Translates to: DQSPAPLKKPAG*WGRAAKGQSAE Trigger: CTCGGCCGACTGACCTTTCGCCGCCCTGCCCCAGCAGCCGGCGGGTTTCTTCAGTGGAGCCGGGCTCTGGTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488789.5 |
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| CDS GCA 72 bp | CTAGCGGGAGGGGGCCGGGCTAGCGGGCTACTGGGCTaGGGAGACCAGAGCCCGGCTCCACTGAAGAAACCC | + |
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Preference number: 6 (lower is better) Translates to: LAGGGRASGLLG*GDQSPAPLKKP Trigger: GGGTTTCTTCAGTGGAGCCGGGCTCTGGTCTCCGCAGCCCAGTAGCCCGCTAGCCCGGCCCCCTCCCGCTAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000488789.5 |
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| CDS CCA 72 bp | CAGAGCCCGGCTCCACTGAAGAAACCCGCCGGCTGCTaGGGCAGGGCGGCGAAAGGTCAGTCGGCCGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: QSPAPLKKPAGC*GRAAKGQSAER Trigger: CCTCTCGGCCGACTGACCTTTCGCCGCCCTGCCCCAGCAGCCGGCGGGTTTCTTCAGTGGAGCCGGGCTCTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000488789.5 |
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| CDS GCA 72 bp | CTTTCCGCAGAAGCAACTGCAAAAGCGCCGGCTCCGTaGAGAGAAAAGGCCCACGCCGCCGGCCTCACCTAC | + |
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Preference number: 6 (lower is better) Translates to: LSAEATAKAPAP*REKAHAAGLTY Trigger: GTAGGTGAGGCCGGCGGCGTGGGCCTTTTCTCTGCACGGAGCCGGCGCTTTTGCAGTTGCTTCTGCGGAAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000464270.5 ENST00000490732.5 |
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| CDS CCA 72 bp | AGGGCGGCGAAAGGTCAGTCGGCCGAGAGGAGTCCGTaGAGCCACCGTTTCATAGCCTCAGGGAAAGGATCG | + |
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Preference number: 6 (lower is better) Translates to: RAAKGQSAERSP*SHRFIASGKGS Trigger: CGATCCTTTCCCTGAGGCTATGAAACGGTGGCTCCACGGACTCCTCTCGGCCGACTGACCTTTCGCCGCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000488789.5 |
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| CDS GCA 72 bp | AGAGACTACGGTGCCGCAAAATGCTGGTGCCTTTACTaGACTTTACGACTAGCGGGAGGGGGCCGGGCTAGC | + |
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Preference number: 6 (lower is better) Translates to: RDYGAAKCWCLY*TLRLAGGGRAS Trigger: GCTAGCCCGGCCCCCTCCCGCTAGTCGTAAAGTGCAGTAAAGGCACCAGCATTTTGCGGCACCGTAGTCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000488789.5 |
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| CDS TCA 72 bp | CCCAGCTACTCAGAAGGCTGTGACAGAAGAATTGCTTaGACCCGAGAGGCAGAGGTTGCAGGGGGCCGAGAT | + |
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Preference number: 6 (lower is better) Translates to: PSYSEGCDRRIA*TREAEVAGGRD Trigger: ATCTCGGCCCCCTGCAACCTCTGCCTCTCGGGTTCAAGCAATTCTTCTGTCACAGCCTTCTGAGTAGCTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000370105.7 ENST00000488789.5 |
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| CDS GCA 72 bp | GAGGAGAAGAGAGACTACGGTGCCGCAAAATGCTGGTaGCTTTACTGCACTTTACGACTAGCGGGAGGGGGC | + |
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Preference number: 6 (lower is better) Translates to: EEKRDYGAAKCW*LYCTLRLAGGG Trigger: GCCCCCTCCCGCTAGTCGTAAAGTGCAGTAAAGGCACCAGCATTTTGCGGCACCGTAGTCTCTCTTCTCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000488789.5 |
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| CDS CAA 90 bp | GCTTCCAGATACACTCGACTGCAGCGTCTAACAACTTCCAGGCCCTaGACTGTGATGTCCTTGGCATCTCCCAGGCCCAACCCGATGAGA | + |
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Preference number: 6 (lower is better) Translates to: ASRYTRLQRLTTSRP*TVMSLASPRPNPMR Trigger: TCTCATCGGGTTGGGCCTGGGAGATGCCAAGGACATCACAGTCAAGGGCCTGGAAGTTGTTAGACGCTGCAGTCGAGTGTATCTGGAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000342173.11 ENST00000370105.7 ENST00000370109.8 ENST00000464270.5 ENST00000476507.1 ENST00000477293.5 ENST00000481982.1 ENST00000488176.1 ENST00000488789.5 ENST00000498372.5 |
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| CDS CAA 72 bp | TACACTCGACTGCAGCGTCTAACAACTTCCAGGCCCTaGACTGTGATGTCCTTGGCATCTCCCAGGCCCAAC | + |
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Preference number: 6 (lower is better) Translates to: YTRLQRLTTSRP*TVMSLASPRPN Trigger: GTTGGGCCTGGGAGATGCCAAGGACATCACAGTCAAGGGCCTGGAAGTTGTTAGACGCTGCAGTCGAGTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000342173.11 ENST00000370105.7 ENST00000370109.8 ENST00000464270.5 ENST00000476507.1 ENST00000477293.5 ENST00000481982.1 ENST00000488176.1 ENST00000488789.5 ENST00000498372.5 |
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| CDS CCA 72 bp | CTTGAGGAGAAGAGAGACTACGGTGCCGCAAAATGCTaGTGCCTTTACTGCACTTTACGACTAGCGGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: LEEKRDYGAAKC*CLYCTLRLAGG Trigger: CCCTCCCGCTAGTCGTAAAGTGCAGTAAAGGCACCAGCATTTTGCGGCACCGTAGTCTCTCTTCTCCTCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488789.5 |
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| CDS CCA 72 bp | GTGCACATTTGCCTTAAAGTGCCTGCTGCAATTTTCTaGTCGTCGGCTCCAACCCTGGCTAAGCCAACACAA | + |
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Preference number: 6 (lower is better) Translates to: VHICLKVPAAIF*SSAPTLAKPTQ Trigger: TTGTGTTGGCTTAGCCAGGGTTGGAGCCGACGACCAGAAAATTGCAGCAGGCACTTTAAGGCAAATGTGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000342173.11 ENST00000370105.7 ENST00000370109.8 ENST00000427040.2 ENST00000464270.5 ENST00000466807.5 ENST00000477293.5 ENST00000481871.5 ENST00000488176.1 ENST00000488789.5 ENST00000490732.5 ENST00000492067.5 ENST00000498372.5 |
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| CDS GCA 72 bp | AAACTTGAGGAGAAGAGAGACTACGGTGCCGCAAAATaGTGGTGCCTTTACTGCACTTTACGACTAGCGGGA | + |
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Preference number: 6 (lower is better) Translates to: KLEEKRDYGAAK*WCLYCTLRLAG Trigger: TCCCGCTAGTCGTAAAGTGCAGTAAAGGCACCAGCATTTTGCGGCACCGTAGTCTCTCTTCTCCTCAAGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488789.5 |
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| CDS GCA 72 bp | GAATGCAATGGTTCTCCCAAGTCCACAGTGCACATTTaGCTTAAAGTGCCTGCTGCAATTTTCTGGTCGTCG | + |
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Preference number: 6 (lower is better) Translates to: ECNGSPKSTVHI*LKVPAAIFWSS Trigger: CGACGACCAGAAAATTGCAGCAGGCACTTTAAGGCAAATGTGCACTGTGGACTTGGGAGAACCATTGCATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000342173.11 ENST00000370105.7 ENST00000370109.8 ENST00000427040.2 ENST00000464270.5 ENST00000466807.5 ENST00000477293.5 ENST00000481871.5 ENST00000488176.1 ENST00000488789.5 ENST00000490732.5 ENST00000492067.5 ENST00000498372.5 |
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| CDS CAA 90 bp | TCGTATTCTTTGATTTTGAACAATCTCCAGAAGCTGCTGGGCTGCTaGGTTTACACTCATATACCGTGGAGGTTCATAGATCTTCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: SYSLILNNLQKLLGC*VYTHIPWRFIDLPS Trigger: GGAAGGAAGATCTATGAACCTCCACGGTATATGAGTGTAAACCAAGCAGCCCAGCAGCTTCTGGAGATTGTTCAAAATCAAAGAATACGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000342173.11 ENST00000370105.7 ENST00000370109.8 ENST00000464270.5 ENST00000466807.5 ENST00000477293.5 ENST00000488176.1 ENST00000488789.5 ENST00000490732.5 ENST00000498372.5 |
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| CDS GCA 72 bp | TCTTTGATTTTGAACAATCTCCAGAAGCTGCTGGGCTaGTTGGTTTACACTCATATACCGTGGAGGTTCATA | + |
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Preference number: 6 (lower is better) Translates to: SLILNNLQKLLG*LVYTHIPWRFI Trigger: TATGAACCTCCACGGTATATGAGTGTAAACCAAGCAGCCCAGCAGCTTCTGGAGATTGTTCAAAATCAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000342173.11 ENST00000370105.7 ENST00000370109.8 ENST00000464270.5 ENST00000466807.5 ENST00000477293.5 ENST00000488176.1 ENST00000488789.5 ENST00000490732.5 ENST00000498372.5 |
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| CDS CCA 72 bp | ATAAAAAGAGTGGCAGACTTCAACTCAGGACTGCTTTaGTTCATCTCCTGGCTCTATCATTCACTATCTGCA | + |
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Preference number: 6 (lower is better) Translates to: IKRVADFNSGLL*FISWLYHSLSA Trigger: TGCAGATAGTGAATGATAGAGCCAGGAGATGAACCAAAGCAGTCCTGAGTTGAAGTCTGCCACTCTTTTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000370105.7 ENST00000488789.5 |
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| CDS GCA 72 bp | GCTTTGGTTCATCTCCTGGCTCTATCATTCACTATCTaGATGAACTTAGGCAAGTTTGTTAACTTCTCTATC | + |
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Preference number: 6 (lower is better) Translates to: ALVHLLALSFTI*MNLGKFVNFSI Trigger: GATAGAGAAGTTAACAAACTTGCCTAAGTTCATGCAGATAGTGAATGATAGAGCCAGGAGATGAACCAAAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000370105.7 ENST00000488789.5 |
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| CDS CAA 90 bp | AATAATAATAATAAAAAGAGTGGCAGACTTCAACTCAGGACTGCTTaGGTTCATCTCCTGGCTCTATCATTCACTATCTGCATGAACTTA | + |
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Preference number: 6 (lower is better) Translates to: NNNNKKSGRLQLRTA*VHLLALSFTICMNL Trigger: TAAGTTCATGCAGATAGTGAATGATAGAGCCAGGAGATGAACCAAAGCAGTCCTGAGTTGAAGTCTGCCACTCTTTTTATTATTATTATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000370105.7 ENST00000488789.5 |
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