RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DPH2 (Homo sapiens)

Ensembl gene IDs: ENSG00000132768

Ensembl transcript IDs: ENST00000255108.8, ENST00000396758.6, ENST00000459879.1, ENST00000471934.1, ENST00000476260.1, ENST00000477294.5, ENST00000490861.5, ENST00000492306.5, ENST00000495421.1, ENST00000524776.5, ENST00000527319.1, ENST00000527567.1, ENST00000529729.1, ENST00000530988.1, ENST00000532140.1, ENST00000534655.1, ENST00000534786.1

Found 568 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTTGGCAGGGGTGGGCCGCCCCAGGGCCAACACATAGCTACGCTTaGCAGCAGCCTGAGTCAGGTTCCGCAAGTGGGCCAGTGCCTCAC +
Preference number: 1 (lower is better)
Translates to: AWQGWAAPGPTHSYA*QQPESGSASGPVPH
Trigger: GTGAGGCACTGGCCCACTTGCGGAACCTGACTCAGGCTGCTGGCAAGCGTAGCTATGTGTTGGCCCTGGGGCGGCCCACCCCTGCCAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
3UTR GCA 90 bp CAAGTGGGCCAGTGCCTCACGGTGTTGGGCTACACCCAGTGTGCCTaGCAGCAGCCCTACCACGCGGGCATCTCTGGCCCTCTCTACCAG +
Preference number: 1 (lower is better)
Translates to: QVGQCLTVLGYTQCA*QQPYHAGISGPLYQ
Trigger: CTGGTAGAGAGGGCCAGAGATGCCCGCGTGGTAGGGCTGCTGGCAGGCACACTGGGTGTAGCCCAACACCGTGAGGCACTGGCCCACTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
3UTR GCA 90 bp TCCGCAAGTGGGCCAGTGCCTCACGGTGTTGGGCTACACCCAGTGTaGCTGCCAGCAGCCCTACCACGCGGGCATCTCTGGCCCTCTCTA +
Preference number: 1 (lower is better)
Translates to: SASGPVPHGVGLHPV*LPAALPRGHLWPSL
Trigger: TAGAGAGGGCCAGAGATGCCCGCGTGGTAGGGCTGCTGGCAGGCACACTGGGTGTAGCCCAACACCGTGAGGCACTGGCCCACTTGCGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
3UTR GCA 90 bp GCTACGCTTGCCAGCAGCCTGAGTCAGGTTCCGCAAGTGGGCCAGTaGCTCACGGTGTTGGGCTACACCCAGTGTGCCTGCCAGCAGCCC +
Preference number: 1 (lower is better)
Translates to: ATLASSLSQVPQVGQ*LTVLGYTQCACQQP
Trigger: GGGCTGCTGGCAGGCACACTGGGTGTAGCCCAACACCGTGAGGCACTGGCCCACTTGCGGAACCTGACTCAGGCTGCTGGCAAGCGTAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
3UTR CCA 90 bp GGCACAGGCCGGCTCACTCAGCAGCACCACAGGCGCTTTGGGGTCTaGGTTCTGGGCCTCAAAGGCCTTGACACAGAGCTCCAAGGCCAC +
Preference number: 1 (lower is better)
Translates to: GTGRLTQQHHRRFGV*VLGLKGLDTELQGH
Trigger: GTGGCCTTGGAGCTCTGTGTCAAGGCCTTTGAGGCCCAGAACCCAGACCCCAAAGCGCCTGTGGTGCTGCTGAGTGAGCCGGCCTGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
3UTR CCA 90 bp ATAGGCGATGGCAATCCCTCGTCTTCCACTCACAGCTTCTGTCACTaGCGTCTGACCCAGGCGGGGCTCCAGCCCTTGCCAGCTCCGGGA +
Preference number: 1 (lower is better)
Translates to: IGDGNPSSSTHSFCH*RLTQAGLQPLPAPG
Trigger: TCCCGGAGCTGGCAAGGGCTGGAGCCCCGCCTGGGTCAGACGCCAGTGACAGAAGCTGTGAGTGGAAGACGAGGGATTGCCATCGCCTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000495421.1
ENST00000524776.5
ENST00000527319.1
3UTR TCA 90 bp ATGGCAATCCCTCGTCTTCCACTCACAGCTTCTGTCACTGGCGTCTaGCCCAGGCGGGGCTCCAGCCCTTGCCAGCTCCGGGAACTAAGG +
Preference number: 1 (lower is better)
Translates to: MAIPRLPLTASVTGV*PRRGSSPCQLRELR
Trigger: CCTTAGTTCCCGGAGCTGGCAAGGGCTGGAGCCCCGCCTGGGTCAGACGCCAGTGACAGAAGCTGTGAGTGGAAGACGAGGGATTGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000495421.1
ENST00000524776.5
ENST00000527319.1
3UTR TCA 90 bp GCAGTGGGCGGGCTGGAGGGCTTAAGCAGGCAGGGCCAAAATGTATaGGAGCCTGAGCTCCAGCTTGCTCAGCACCCAGCACATCCACGC +
Preference number: 1 (lower is better)
Translates to: AVGGLEGLSRQGQNV*EPELQLAQHPAHPR
Trigger: GCGTGGATGTGCTGGGTGCTGAGCAAGCTGGAGCTCAGGCTCTCATACATTTTGGCCCTGCCTGCTTAAGCCCTCCAGCCCGCCCACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000532140.1
3UTR TCA 90 bp TGGGCCTCAAAGGCCTTGACACAGAGCTCCAAGGCCACAGAACGTTaGCGAAGCACGAAGGCAACGGGCAGTGGGCGGGCTGGAGGGCTT +
Preference number: 1 (lower is better)
Translates to: WASKALTQSSKATER*RSTKATGSGRAGGL
Trigger: AAGCCCTCCAGCCCGCCCACTGCCCGTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTTGGAGCTCTGTGTCAAGGCCTTTGAGGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476260.1
ENST00000492306.5
3UTR GCA 90 bp CCTCAACTGCAGCCTGGGAACTGGGATTGGCCAAAGGTCCTGGGCTaGCCTCAGGAAGACAGATGGGTCCAGAGGCCTCAGGGAAGTCCC +
Preference number: 1 (lower is better)
Translates to: PQLQPGNWDWPKVLG*PQEDRWVQRPQGSP
Trigger: GGGACTTCCCTGAGGCCTCTGGACCCATCTGTCTTCCTGAGGGCAGCCCAGGACCTTTGGCCAATCCCAGTTCCCAGGCTGCAGTTGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
3UTR CCA 90 bp GCCGGCTCACTCAGCAGCACCACAGGCGCTTTGGGGTCTGGGTTCTaGGCCTCAAAGGCCTTGACACAGAGCTCCAAGGCCACAGAACGT +
Preference number: 1 (lower is better)
Translates to: AGSLSSTTGALGSGF*ASKALTQSSKATER
Trigger: ACGTTCTGTGGCCTTGGAGCTCTGTGTCAAGGCCTTTGAGGCCCAGAACCCAGACCCCAAAGCGCCTGTGGTGCTGCTGAGTGAGCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
3UTR CCA 90 bp GAAGGGTTGACCTGGTGCCCACCCCAAGAGCAGCCGACTCAGGTCTaGGTCAAGGTCTGGGTCAGGGCTGGCCTTAGAGCCCCCTACATA +
Preference number: 1 (lower is better)
Translates to: EGLTWCPPQEQPTQV*VKVWVRAGLRAPYI
Trigger: TATGTAGGGGGCTCTAAGGCCAGCCCTGACCCAGACCTTGACCCAGACCTGAGTCGGCTGCTCTTGGGGTGGGCACCAGGTCAACCCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495421.1
3UTR CCA 90 bp CTACACCCAGTGTGCCTGCCAGCAGCCCTACCACGCGGGCATCTCTaGCCCTCTCTACCAGATATCGTCTTCGTGCCCTTAGCCGTCCAG +
Preference number: 1 (lower is better)
Translates to: LHPVCLPAALPRGHL*PSLPDIVFVPLAVQ
Trigger: CTGGACGGCTAAGGGCACGAAGACGATATCTGGTAGAGAGGGCCAGAGATGCCCGCGTGGTAGGGCTGCTGGCAGGCACACTGGGTGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
3UTR CCA 90 bp GCACAAAGACATCCACCTCAGGGAAGTTGGCAAGCTTGGCAGGGGTaGGCCGCCCCAGGGCCAACACATAGCTACGCTTGCCAGCAGCCT +
Preference number: 1 (lower is better)
Translates to: AQRHPPQGSWQAWQG*AAPGPTHSYACQQP
Trigger: AGGCTGCTGGCAAGCGTAGCTATGTGTTGGCCCTGGGGCGGCCCACCCCTGCCAAGCTTGCCAACTTCCCTGAGGTGGATGTCTTTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
3UTR TCA 90 bp CGGGCTGGAGGGCTTAAGCAGGCAGGGCCAAAATGTATGAGAGCCTaGGCTCCAGCTTGCTCAGCACCCAGCACATCCACGCAGCAGCTG +
Preference number: 1 (lower is better)
Translates to: RAGGLKQAGPKCMRA*APACSAPSTSTQQL
Trigger: CAGCTGCTGCGTGGATGTGCTGGGTGCTGAGCAAGCTGGAGCTCAGGCTCTCATACATTTTGGCCCTGCCTGCTTAAGCCCTCCAGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492306.5
ENST00000532140.1
3UTR TCA 90 bp GCACCACAGGCGCTTTGGGGTCTGGGTTCTGGGCCTCAAAGGCCTTaGCACAGAGCTCCAAGGCCACAGAACGTTGACGAAGCACGAAGG +
Preference number: 1 (lower is better)
Translates to: APQALWGLGSGPQRP*HRAPRPQNVDEARR
Trigger: CCTTCGTGCTTCGTCAACGTTCTGTGGCCTTGGAGCTCTGTGTCAAGGCCTTTGAGGCCCAGAACCCAGACCCCAAAGCGCCTGTGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
3UTR TCA 90 bp CGGGCTGGAGGGCTTAAGCAGGCAGGGCCAAAATGTATGAGAGCCTaGGCTCCAGCTTGCTCAGCACCCAGCACATCCACGCAGCAGCAT +
Preference number: 1 (lower is better)
Translates to: RAGGLKQAGPKCMRA*APACSAPSTSTQQH
Trigger: ATGCTGCTGCGTGGATGTGCTGGGTGCTGAGCAAGCTGGAGCTCAGGCTCTCATACATTTTGGCCCTGCCTGCTTAAGCCCTCCAGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476260.1
3UTR GCA 90 bp CCAGTGCCAGGACAGGACAGAGACGGATCCTATCCTGTGAAGGGCTaGCTGCTCTCCCTCCTTCCAGGGTCCTTCAAGGATCTTGGCAGG +
Preference number: 1 (lower is better)
Translates to: PVPGQDRDGSYPVKG*LLSLLPGSFKDLGR
Trigger: CCTGCCAAGATCCTTGAAGGACCCTGGAAGGAGGGAGAGCAGGCAGCCCTTCACAGGATAGGATCCGTCTCTGTCCTGTCCTGGCACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000524776.5
ENST00000527319.1
3UTR GCA 90 bp AGTCTTCCCTGTATCTGGACAGCAGGAGGAGAAGGGTTGACCTGGTaGCCACCCCAAGAGCAGCCGACTCAGGTCTGGGTCAAGGTCTGG +
Preference number: 1 (lower is better)
Translates to: SLPCIWTAGGEGLTW*PPQEQPTQVWVKVW
Trigger: CCAGACCTTGACCCAGACCTGAGTCGGCTGCTCTTGGGGTGGGCACCAGGTCAACCCTTCTCCTCCTGCTGTCCAGATACAGGGAAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
3UTR CCA 90 bp CTGAGTCTTCCCTGTATCTGGACAGCAGGAGGAGAAGGGTTGACCTaGTGCCCACCCCAAGAGCAGCCGACTCAGGTCTGGGTCAAGGTC +
Preference number: 1 (lower is better)
Translates to: LSLPCIWTAGGEGLT*CPPQEQPTQVWVKV
Trigger: GACCTTGACCCAGACCTGAGTCGGCTGCTCTTGGGGTGGGCACCAGGTCAACCCTTCTCCTCCTGCTGTCCAGATACAGGGAAGACTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
3UTR TCA 90 bp CCAGCACATCCACGCAGCAGCTGCCGTAGGCTGTGTCACCCAGAATaGACATCTTTGACCCTGTCGTCTCCTCCAGTCGTGCAGCCACAG +
Preference number: 1 (lower is better)
Translates to: PAHPRSSCRRLCHPE*TSLTLSSPPVVQPQ
Trigger: CTGTGGCTGCACGACTGGAGGAGACGACAGGGTCAAAGATGTTCATTCTGGGTGACACAGCCTACGGCAGCTGCTGCGTGGATGTGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532140.1
3UTR CCA 90 bp AGGCTAATAGCACAAAGACATCCACCTCAGGGAAGTTGGCAAGCTTaGCAGGGGTGGGCCGCCCCAGGGCCAACACATAGCTACGCTTGC +
Preference number: 1 (lower is better)
Translates to: RLIAQRHPPQGSWQA*QGWAAPGPTHSYAC
Trigger: GCAAGCGTAGCTATGTGTTGGCCCTGGGGCGGCCCACCCCTGCCAAGCTTGCCAACTTCCCTGAGGTGGATGTCTTTGTGCTATTAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
3UTR CCA 90 bp TGCTCTCCCTCCTTCCAGGGTCCTTCAAGGATCTTGGCAGGGGGATaGGAGGTTGGTGCAGGGAGCACTAAAGGTCCTAGCAGCCATTCA +
Preference number: 1 (lower is better)
Translates to: CSPSFQGPSRILAGG*EVGAGSTKGPSSHS
Trigger: TGAATGGCTGCTAGGACCTTTAGTGCTCCCTGCACCAACCTCCCATCCCCCTGCCAAGATCCTTGAAGGACCCTGGAAGGAGGGAGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000524776.5
ENST00000527319.1
3UTR CCA 90 bp CCAGCCCCACATGGTATCAGCCGCTTCCCTCATCCTCATAGGCGATaGCAATCCCTCGTCTTCCACTCACAGCTTCTGTCACTGGCGTCT +
Preference number: 1 (lower is better)
Translates to: PAPHGISRFPHPHRR*QSLVFHSQLLSLAS
Trigger: AGACGCCAGTGACAGAAGCTGTGAGTGGAAGACGAGGGATTGCCATCGCCTATGAGGATGAGGGAAGCGGCTGATACCATGTGGGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000495421.1
ENST00000524776.5
ENST00000527319.1
3UTR CCA 90 bp AAGTCCCTAAGCCCTTTATTCCATCAGCCAAACAACACGCATTACTaGGCATGTGCTGAGCTTGTGCCAGTGCCAGGACAGGACAGAGAC +
Preference number: 1 (lower is better)
Translates to: KSLSPLFHQPNNTHY*ACAELVPVPGQDRD
Trigger: GTCTCTGTCCTGTCCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAATGCGTGTTGTTTGGCTGATGGAATAAAGGGCTTAGGGACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
ENST00000527319.1
3UTR-3UTR CCA 90 bp TTCTGTCACTGGCGTCTGACCCAGGCGGGGCTCCAGCCCTTGCCAGCTCCGGGACTCCAGCTGGGGCCGTaGGGTCAGAGCCAAGCTTCC +
Preference number: 2 (lower is better)
Translates to: FCHWRLTQAGLQPLPAPGLQLGP*GQSQAS
Trigger: GGAAGCTTGGCTCTGACCCCACGGCCCCAGCTGGAG...TCCCGGAGCTGGCAAGGGCTGGAGCCCCGCCTGGGTCAGACGCCAGTGACAGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000495421.1
ENST00000524776.5
ENST00000527319.1
3UTR CAA 90 bp AGCAGCCTGAGTCAGGTTCCGCAAGTGGGCCAGTGCCTCACGGTGTaGGGCTACACCCAGTGTGCCTGCCAGCAGCCCTACCACGCGGGC +
Preference number: 2 (lower is better)
Translates to: SSLSQVPQVGQCLTV*GYTQCACQQPYHAG
Trigger: GCCCGCGTGGTAGGGCTGCTGGCAGGCACACTGGGTGTAGCCCAACACCGTGAGGCACTGGCCCACTTGCGGAACCTGACTCAGGCTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
3UTR-3UTR CCA 90 bp CTCGTCTTCCACTCACAGCTTCTGTCACTGGCGTCTGACCCAGGCGGGGCTCCATCAGCCAGCTCCAGCTaGGGCCGTGGGGTCAGAGCC +
Preference number: 2 (lower is better)
Translates to: LVFHSQLLSLASDPGGAPSASSS*GRGVRA
Trigger: GGCTCTGACCCCACGGCCCCAGCTGGAGCTGGCTGA...TGGAGCCCCGCCTGGGTCAGACGCCAGTGACAGAAGCTGTGAGTGGAAGACGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000495421.1
ENST00000524776.5
ENST00000527319.1
3UTR CAA 90 bp AGGGCATGGGCACAGGCCGGCTCACTCAGCAGCACCACAGGCGCTTaGGGGTCTGGGTTCTGGGCCTCAAAGGCCTTGACACAGAGCTCC +
Preference number: 2 (lower is better)
Translates to: RAWAQAGSLSSTTGA*GSGFWASKALTQSS
Trigger: GGAGCTCTGTGTCAAGGCCTTTGAGGCCCAGAACCCAGACCCCAAAGCGCCTGTGGTGCTGCTGAGTGAGCCGGCCTGTGCCCATGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
3UTR-3UTR GCA 90 bp AGTTGGCAAGCTTGGCAGGGGTGGGCCGCCCCAGGGCCAACACATAGCTACGCTTACACCCAGTGTGCCTaGCAGCAGCCCTACCACGCG +
Preference number: 2 (lower is better)
Translates to: SWQAWQGWAAPGPTHSYAYTQCA*QQPYHA
Trigger: CGCGTGGTAGGGCTGCTGGCAGGCACACTGGGTGTA...AGCGTAGCTATGTGTTGGCCCTGGGGCGGCCCACCCCTGCCAAGCTTGCCAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
3UTR-3UTR GCA 90 bp ACTCACAGCTTCTGTCACTGGCGTCTGACCCAGGCGGGGCTCCAGCCCTTGCCATACACCCAGTGTGCCTaGCAGCAGCCCTACCACGCG +
Preference number: 2 (lower is better)
Translates to: THSFCHWRLTQAGLQPLPYTQCA*QQPYHA
Trigger: CGCGTGGTAGGGCTGCTGGCAGGCACACTGGGTGTA...TGGCAAGGGCTGGAGCCCCGCCTGGGTCAGACGCCAGTGACAGAAGCTGTGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
3UTR-3UTR GCA 90 bp ACTCACAGCTTCTGTCACTGGCGTCTGACCCAGGCGGGGCTCCAGCCCTTGCCAGGGCTACACCCAGTGTaGCTGCCAGCAGCCCTACCA +
Preference number: 2 (lower is better)
Translates to: THSFCHWRLTQAGLQPLPGLHPV*LPAALP
Trigger: TGGTAGGGCTGCTGGCAGGCACACTGGGTGTAGCCC...TGGCAAGGGCTGGAGCCCCGCCTGGGTCAGACGCCAGTGACAGAAGCTGTGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
3UTR-3UTR CCA 90 bp AGGTACCGTGGGCGCAGGAGAGTAGCCAAAGCCTCCAGGGCATGGGCACAGGCCAGGCGCTTTGGGGTCTaGGTTCTGGGCCTCAAAGGC +
Preference number: 2 (lower is better)
Translates to: RYRGRRRVAKASRAWAQARRFGV*VLGLKG
Trigger: GCCTTTGAGGCCCAGAACCCAGACCCCAAAGCGCCT...GGCCTGTGCCCATGCCCTGGAGGCTTTGGCTACTCTCCTGCGCCCACGGTACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
3UTR CAA 90 bp CTGGGCCTCAAAGGCCTTGACACAGAGCTCCAAGGCCACAGAACGTaGACGAAGCACGAAGGCAACGGGCAGTGGGCGGGCTGGAGGGCT +
Preference number: 2 (lower is better)
Translates to: LGLKGLDTELQGHRT*TKHEGNGQWAGWRA
Trigger: AGCCCTCCAGCCCGCCCACTGCCCGTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTTGGAGCTCTGTGTCAAGGCCTTTGAGGCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476260.1
ENST00000492306.5
3UTR-3UTR GCA 90 bp CTCGTCTTCCACTCACAGCTTCTGTCACTGGCGTCTGACCCAGGCGGGGCTCCACCGCAAGTGGGCCAGTaGCTCACGGTGTTGGGCTAC +
Preference number: 2 (lower is better)
Translates to: LVFHSQLLSLASDPGGAPPQVGQ*LTVLGY
Trigger: GTAGCCCAACACCGTGAGGCACTGGCCCACTTGCGG...TGGAGCCCCGCCTGGGTCAGACGCCAGTGACAGAAGCTGTGAGTGGAAGACGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
3UTR-3UTR CCA 90 bp TTCTGTCACTGGCGTCTGACCCAGGCGGGGCTCCAGCCCTTGCCAGCTCCGGGATTGGGGTCTGGGTTCTaGGCCTCAAAGGCCTTGACA +
Preference number: 2 (lower is better)
Translates to: FCHWRLTQAGLQPLPAPGLGSGF*ASKALT
Trigger: TGTCAAGGCCTTTGAGGCCCAGAACCCAGACCCCAA...TCCCGGAGCTGGCAAGGGCTGGAGCCCCGCCTGGGTCAGACGCCAGTGACAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495421.1
3UTR-3UTR TCA 90 bp GAGACTAGCAGGTCCAGGTACCGTGGGCGCAGGAGAGTAGCCAAAGCCTCCAGGACGGATCCTATCCTGTaGAGGGCTGCCTGCTCTCCC +
Preference number: 2 (lower is better)
Translates to: ETSRSRYRGRRRVAKASRTDPIL*RAACSP
Trigger: GGGAGAGCAGGCAGCCCTTCACAGGATAGGATCCGT...CCTGGAGGCTTTGGCTACTCTCCTGCGCCCACGGTACCTGGACCTGCTAGTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495421.1
3UTR-3UTR TCA 90 bp CTTGCCAGCAGCCTGAGTCAGGTTCCGCAAGTGGGCCAGTGCCTCACGGTGTTGACGGATCCTATCCTGTaGAGGGCTGCCTGCTCTCCC +
Preference number: 2 (lower is better)
Translates to: LASSLSQVPQVGQCLTVLTDPIL*RAACSP
Trigger: GGGAGAGCAGGCAGCCCTTCACAGGATAGGATCCGT...CAACACCGTGAGGCACTGGCCCACTTGCGGAACCTGACTCAGGCTGCTGGCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
3UTR-3UTR TCA 90 bp GAGACTAGCAGGTCCAGGTACCGTGGGCGCAGGAGAGTAGCCAAAGCCTCCAGGGGGCCTCAAAGGCCTTaGCACAGAGCTCCAAGGCCA +
Preference number: 2 (lower is better)
Translates to: ETSRSRYRGRRRVAKASRGPQRP*HRAPRP
Trigger: TGGCCTTGGAGCTCTGTGTCAAGGCCTTTGAGGCCC...CCTGGAGGCTTTGGCTACTCTCCTGCGCCCACGGTACCTGGACCTGCTAGTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
3UTR-3UTR GCA 90 bp AGGCAACGGGCAGTGGGCGGGCTGGAGGGCTTAAGCAGGCAGGGCCAAAATGTACGTCTCCTCCAGTCGTaGAGCCACAGCCACAGCATC +
Preference number: 2 (lower is better)
Translates to: RQRAVGGLEGLSRQGQNVRLLQS*SHSHSI
Trigger: GATGCTGTGGCTGTGGCTGCACGACTGGAGGAGACG...TACATTTTGGCCCTGCCTGCTTAAGCCCTCCAGCCCGCCCACTGCCCGTTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532140.1
3UTR-3UTR CCA 90 bp CGTCTGGGGTTTCCCACAGCTCTGACTCAGGTGGTGGGAGAGCCACGTGGAAGGAGGCGCTTTGGGGTCTaGGTTCTGGGCCTCAAAGGC +
Preference number: 2 (lower is better)
Translates to: RLGFPTALTQVVGEPRGRRRFGV*VLGLKG
Trigger: GCCTTTGAGGCCCAGAACCCAGACCCCAAAGCGCCT...CCTTCCACGTGGCTCTCCCACCACCTGAGTCAGAGCTGTGGGAAACCCCAGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495421.1
3UTR-3UTR CCA 90 bp AGAGCTCCAAGGCCACAGAACGTTGACGAAGCACGAAGGCAACGGGCAGTGGGCAAAGCCTCCAGGGCATaGGCACAGGCCGGCTCACTC +
Preference number: 2 (lower is better)
Translates to: RAPRPQNVDEARRQRAVGKASRA*AQAGSL
Trigger: GAGTGAGCCGGCCTGTGCCCATGCCCTGGAGGCTTT...GCCCACTGCCCGTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTTGGAGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
3UTR-3UTR CCA 90 bp GAGACTAGCAGGTCCAGGTACCGTGGGCGCAGGAGAGTAGCCAAAGCCTCCAGGCAGGTCCAGGTACCGTaGGCGCAGGAGAGTAGCCAA +
Preference number: 2 (lower is better)
Translates to: ETSRSRYRGRRRVAKASRQVQVP*AQESSQ
Trigger: TTGGCTACTCTCCTGCGCCCACGGTACCTGGACCTG...CCTGGAGGCTTTGGCTACTCTCCTGCGCCCACGGTACCTGGACCTGCTAGTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
3UTR-3UTR CCA 90 bp AGCCTGAGTCAGGTTCCGCAAGTGGGCCAGTGCCTCACGGTGTTGGGCTACACCCAGGTCCAGGTACCGTaGGCGCAGGAGAGTAGCCAA +
Preference number: 2 (lower is better)
Translates to: SLSQVPQVGQCLTVLGYTQVQVP*AQESSQ
Trigger: TTGGCTACTCTCCTGCGCCCACGGTACCTGGACCTG...GGTGTAGCCCAACACCGTGAGGCACTGGCCCACTTGCGGAACCTGACTCAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495421.1
3UTR-3UTR CCA 90 bp CGTCTGGGGTTTCCCACAGCTCTGACTCAGGTGGTGGGAGAGCCACGTGGAAGGCAGCCGACTCAGGTCTaGGTCAAGGTCTGGGTCAGG +
Preference number: 2 (lower is better)
Translates to: RLGFPTALTQVVGEPRGRQPTQV*VKVWVR
Trigger: CCTGACCCAGACCTTGACCCAGACCTGAGTCGGCTG...CCTTCCACGTGGCTCTCCCACCACCTGAGTCAGAGCTGTGGGAAACCCCAGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
3UTR-3UTR CCA 90 bp AAGGACAGACCCTCAACTGCAGCCTGGGAACTGGGATTGGCCAAAGGTCCTGGGGGAAGTTGGCAAGCTTaGCAGGGGTGGGCCGCCCCA +
Preference number: 2 (lower is better)
Translates to: KDRPSTAAWELGLAKGPGGSWQA*QGWAAP
Trigger: TGGGGCGGCCCACCCCTGCCAAGCTTGCCAACTTCC...CCCAGGACCTTTGGCCAATCCCAGTTCCCAGGCTGCAGTTGAGGGTCTGTCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495421.1
3UTR-3UTR TCA 90 bp GGACAGACCCTCAACTGCAGCCTGGGAACTGGGATTGGCCAAAGGTCCTGGGCTACGGATCCTATCCTGTaGAGGGCTGCCTGCTCTCCC +
Preference number: 2 (lower is better)
Translates to: GQTLNCSLGTGIGQRSWATDPIL*RAACSP
Trigger: GGGAGAGCAGGCAGCCCTTCACAGGATAGGATCCGT...AGCCCAGGACCTTTGGCCAATCCCAGTTCCCAGGCTGCAGTTGAGGGTCTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
3UTR-3UTR TCA 90 bp GTCCAGGTACCGTGGGCGCAGGAGAGTAGCCAAAGCCTCCAGGGCATGGGCACAAAGGCCACAGAACGTTaGCGAAGCACGAAGGCAACG +
Preference number: 2 (lower is better)
Translates to: VQVPWAQESSQSLQGMGTKATER*RSTKAT
Trigger: CGTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTT...TGTGCCCATGCCCTGGAGGCTTTGGCTACTCTCCTGCGCCCACGGTACCTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
3UTR CAA 90 bp CTCATCCTGAGTCTTCCCTGTATCTGGACAGCAGGAGGAGAAGGGTaGACCTGGTGCCCACCCCAAGAGCAGCCGACTCAGGTCTGGGTC +
Preference number: 2 (lower is better)
Translates to: LILSLPCIWTAGGEG*TWCPPQEQPTQVWV
Trigger: GACCCAGACCTGAGTCGGCTGCTCTTGGGGTGGGCACCAGGTCAACCCTTCTCCTCCTGCTGTCCAGATACAGGGAAGACTCAGGATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
3UTR-3UTR TCA 90 bp GCTGGGCTGGAGACTAGCAGGTCCAGGTACCGTGGGCGCAGGAGAGTAGCCAAAAAGGCCACAGAACGTTaGCGAAGCACGAAGGCAACG +
Preference number: 2 (lower is better)
Translates to: AGLETSRSRYRGRRRVAKKATER*RSTKAT
Trigger: CGTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTT...TTTGGCTACTCTCCTGCGCCCACGGTACCTGGACCTGCTAGTCTCCAGCCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
3UTR-3UTR TCA 90 bp AGGCAACGGGCAGTGGGCGGGCTGGAGGGCTTAAGCAGGCAGGGCCAAAATGTAAAGGCCACAGAACGTTaGCGAAGCACGAAGGCAACG +
Preference number: 2 (lower is better)
Translates to: RQRAVGGLEGLSRQGQNVKATER*RSTKAT
Trigger: CGTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTT...TACATTTTGGCCCTGCCTGCTTAAGCCCTCCAGCCCGCCCACTGCCCGTTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000532140.1
3UTR-3UTR TCA 90 bp AGGTACCGTGGGCGCAGGAGAGTAGCCAAAGCCTCCAGGGCATGGGCACAGGCCAAATGTATGAGAGCCTaGGCTCCAGCTTGCTCAGCA +
Preference number: 2 (lower is better)
Translates to: RYRGRRRVAKASRAWAQAKCMRA*APACSA
Trigger: TGCTGAGCAAGCTGGAGCTCAGGCTCTCATACATTT...GGCCTGTGCCCATGCCCTGGAGGCTTTGGCTACTCTCCTGCGCCCACGGTACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476260.1
ENST00000492306.5
3UTR-3UTR GCA 90 bp TTCTGTCACTGGCGTCTGACCCAGGCGGGGCTCCAGCCCTTGCCAGCTCCGGGATTCCAGCTCACATGGTaGCAGTATAGGCTGGAAGAA +
Preference number: 2 (lower is better)
Translates to: FCHWRLTQAGLQPLPAPGFQLTW*QYRLEE
Trigger: TTCTTCCAGCCTATACTGGCACCATGTGAGCTGGAA...TCCCGGAGCTGGCAAGGGCTGGAGCCCCGCCTGGGTCAGACGCCAGTGACAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
3UTR-3UTR CCA 90 bp GGGCATGTGCTGAGCTTGTGCCAGTGCCAGGACAGGACAGAGACGGATCCTATCCCTGGGAACTGGGATTaGCCAAAGGTCCTGGGCTGC +
Preference number: 2 (lower is better)
Translates to: GHVLSLCQCQDRTETDPIPGNWD*PKVLGC
Trigger: GCAGCCCAGGACCTTTGGCCAATCCCAGTTCCCAGG...GATAGGATCCGTCTCTGTCCTGTCCTGGCACTGGCACAAGCTCAGCACATGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
3UTR-3UTR CCA 90 bp GGACAGACCCTCAACTGCAGCCTGGGAACTGGGATTGGCCAAAGGTCCTGGGCTGGGGAAAAGCTGGGCTaGAGACTAGCAGGTCCAGGT +
Preference number: 2 (lower is better)
Translates to: GQTLNCSLGTGIGQRSWAGEKLG*RLAGPG
Trigger: ACCTGGACCTGCTAGTCTCCAGCCCAGCTTTTCCCC...AGCCCAGGACCTTTGGCCAATCCCAGTTCCCAGGCTGCAGTTGAGGGTCTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495421.1
3UTR-3UTR TCA 90 bp CTCCAAGGCCACAGAACGTTGACGAAGCACGAAGGCAACGGGCAGTGGGCGGGCAAATGTATGAGAGCCTaGGCTCCAGCTTGCTCAGCA +
Preference number: 2 (lower is better)
Translates to: LQGHRTLTKHEGNGQWAGKCMRA*APACSA
Trigger: TGCTGAGCAAGCTGGAGCTCAGGCTCTCATACATTT...GCCCGCCCACTGCCCGTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000532140.1
3UTR-3UTR TCA 90 bp CAGCTTGCTCAGCACCCAGCACATCCACGCAGCAGCTGCCGTAGGCTGTGTCACCAGGGCCAAAATGTATaGGAGCCTGAGCTCCAGCTT +
Preference number: 2 (lower is better)
Translates to: QLAQHPAHPRSSCRRLCHQGQNV*EPELQL
Trigger: AAGCTGGAGCTCAGGCTCTCATACATTTTGGCCCTG...GTGACACAGCCTACGGCAGCTGCTGCGTGGATGTGCTGGGTGCTGAGCAAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532140.1
3UTR-3UTR TCA 90 bp CTCCAAGGCCACAGAACGTTGACGAAGCACGAAGGCAACGGGCAGTGGGCGGGCCTGTGTCACCCAGAATaGACATCTTTGACCCTGTCG +
Preference number: 2 (lower is better)
Translates to: LQGHRTLTKHEGNGQWAGLCHPE*TSLTLS
Trigger: CGACAGGGTCAAAGATGTTCATTCTGGGTGACACAG...GCCCGCCCACTGCCCGTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532140.1
3UTR-3UTR GCA 90 bp GGGCATGTGCTGAGCTTGTGCCAGTGCCAGGACAGGACAGAGACGGATCCTATCCTGAGCTTGTGCCAGTaGCAGGACAGGACAGAGACG +
Preference number: 2 (lower is better)
Translates to: GHVLSLCQCQDRTETDPILSLCQ*QDRTET
Trigger: CGTCTCTGTCCTGTCCTGGCACTGGCACAAGCTCAG...GATAGGATCCGTCTCTGTCCTGTCCTGGCACTGGCACAAGCTCAGCACATGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000527319.1
3UTR-3UTR CCA 90 bp GGAAAAGCTGGGCTGGAGACTAGCAGGTCCAGGTACCGTGGGCGCAGGAGAGTATTGGGGTCTGGGTTCTaGGCCTCAAAGGCCTTGACA +
Preference number: 2 (lower is better)
Translates to: GKAGLETSRSRYRGRRRVLGSGF*ASKALT
Trigger: TGTCAAGGCCTTTGAGGCCCAGAACCCAGACCCCAA...TACTCTCCTGCGCCCACGGTACCTGGACCTGCTAGTCTCCAGCCCAGCTTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
3UTR-3UTR CCA 90 bp CCAACACATAGCTACGCTTGCCAGCAGCCTGAGTCAGGTTCCGCAAGTGGGCCACCACGCGGGCATCTCTaGCCCTCTCTACCAGATATC +
Preference number: 2 (lower is better)
Translates to: PTHSYACQQPESGSASGPPRGHL*PSLPDI
Trigger: GATATCTGGTAGAGAGGGCCAGAGATGCCCGCGTGG...TGGCCCACTTGCGGAACCTGACTCAGGCTGCTGGCAAGCGTAGCTATGTGTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
3UTR-3UTR TCA 90 bp CCAAACAACACGCATTACTGGGCATGTGCTGAGCTTGTGCCAGTGCCAGGACAGACGGATCCTATCCTGTaGAGGGCTGCCTGCTCTCCC +
Preference number: 2 (lower is better)
Translates to: PNNTHYWACAELVPVPGQTDPIL*RAACSP
Trigger: GGGAGAGCAGGCAGCCCTTCACAGGATAGGATCCGT...CTGTCCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAATGCGTGTTGTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000527319.1
3UTR-3UTR TCA 90 bp AGGGCCAAAATGTATGAGAGCCTGAGCTCCAGCTTGCTCAGCACCCAGCACATCGGGCCTCAAAGGCCTTaGCACAGAGCTCCAAGGCCA +
Preference number: 2 (lower is better)
Translates to: RAKMYESLSSSLLSTQHIGPQRP*HRAPRP
Trigger: TGGCCTTGGAGCTCTGTGTCAAGGCCTTTGAGGCCC...GATGTGCTGGGTGCTGAGCAAGCTGGAGCTCAGGCTCTCATACATTTTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476260.1
ENST00000492306.5
3UTR-3UTR TCA 90 bp TCAGCCGCTTCCCTCATCCTCATAGGCGATGGCAATCCCTCGTCTTCCACTCACCCGGGAACTAAGGAATaGGGCTGCAGGACTGCTCTC +
Preference number: 2 (lower is better)
Translates to: SAASLILIGDGNPSSSTHPGTKE*GCRTAL
Trigger: GAGAGCAGTCCTGCAGCCTCATTCCTTAGTTCCCGG...GTGAGTGGAAGACGAGGGATTGCCATCGCCTATGAGGATGAGGGAAGCGGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000495421.1
ENST00000524776.5
ENST00000527319.1
3UTR-3UTR TCA 90 bp AGAGCTCCAAGGCCACAGAACGTTGACGAAGCACGAAGGCAACGGGCAGTGGGCCAGGGCCAAAATGTATaGGAGCCTGAGCTCCAGCTT +
Preference number: 2 (lower is better)
Translates to: RAPRPQNVDEARRQRAVGQGQNV*EPELQL
Trigger: AAGCTGGAGCTCAGGCTCTCATACATTTTGGCCCTG...GCCCACTGCCCGTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTTGGAGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000532140.1
3UTR-3UTR CCA 90 bp CACAGAGCTCCAAGGCCACAGAACGTTGACGAAGCACGAAGGCAACGGGCAGTGTTGGGGTCTGGGTTCTaGGCCTCAAAGGCCTTGACA +
Preference number: 2 (lower is better)
Translates to: HRAPRPQNVDEARRQRAVLGSGF*ASKALT
Trigger: TGTCAAGGCCTTTGAGGCCCAGAACCCAGACCCCAA...CACTGCCCGTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTTGGAGCTCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
3UTR-3UTR CCA 90 bp GCTGAGCACCCTACCATACACCAGACAGCCCCACAACAAAGAATTATCTGGCCCGCACCACAGGCGCTTTaGGGTCTGGGTTCTGGGCCT +
Preference number: 2 (lower is better)
Translates to: AEHPTIHQTAPQQRIIWPAPQAL*GLGSGP
Trigger: AGGCCCAGAACCCAGACCCCAAAGCGCCTGTGGTGC...GGGCCAGATAATTCTTTGTTGTGGGGCTGTCTGGTGTATGGTAGGGTGCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495421.1
3UTR-3UTR TCA 90 bp GGGGATGGGAGGTTGGTGCAGGGAGCACTAAAGGTCCTAGCAGCCATTCATAAGTTACTGGGCATGTGCTaGGCTTGTGCCAGTGCCAGG +
Preference number: 2 (lower is better)
Translates to: GDGRLVQGALKVLAAIHKLLGMC*ACASAR
Trigger: CCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAA...CTTATGAATGGCTGCTAGGACCTTTAGTGCTCCCTGCACCAACCTCCCATCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000527319.1
3UTR-3UTR GCA 90 bp AGCCAAACAACACGCATTACTGGGCATGTGCTGAGCTTGTGCCAGTGCCAGGACCTGAGCTTGTGCCAGTaGCAGGACAGGACAGAGACG +
Preference number: 2 (lower is better)
Translates to: SQTTRITGHVLSLCQCQDLSLCQ*QDRTET
Trigger: CGTCTCTGTCCTGTCCTGGCACTGGCACAAGCTCAG...GTCCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAATGCGTGTTGTTTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000527319.1
3UTR-3UTR GCA 90 bp CGTCTGGGGTTTCCCACAGCTCTGACTCAGGTGGTGGGAGAGCCACGTGGAAGGTTCCAGCTCACATGGTaGCAGTATAGGCTGGAAGAA +
Preference number: 2 (lower is better)
Translates to: RLGFPTALTQVVGEPRGRFQLTW*QYRLEE
Trigger: TTCTTCCAGCCTATACTGGCACCATGTGAGCTGGAA...CCTTCCACGTGGCTCTCCCACCACCTGAGTCAGAGCTGTGGGAAACCCCAGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
3UTR-3UTR CCA 90 bp GCCATTCATAAGTCCATCTATGTCTCCAGCCCCACATGGTATCAGCCGCTTCCCGGAGAAGGGTTGACCTaGTGCCCACCCCAAGAGCAG +
Preference number: 2 (lower is better)
Translates to: AIHKSIYVSSPTWYQPLPGEGLT*CPPQEQ
Trigger: CTGCTCTTGGGGTGGGCACCAGGTCAACCCTTCTCC...GGGAAGCGGCTGATACCATGTGGGGCTGGAGACATAGATGGACTTATGAATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
3UTR-3UTR CCA 90 bp CCAACACATAGCTACGCTTGCCAGCAGCCTGAGTCAGGTTCCGCAAGTGGGCCAAGTCTTCCCTGTATCTaGACAGCAGGAGGAGAAGGG +
Preference number: 2 (lower is better)
Translates to: PTHSYACQQPESGSASGPSLPCI*TAGGEG
Trigger: CCCTTCTCCTCCTGCTGTCCAGATACAGGGAAGACT...TGGCCCACTTGCGGAACCTGACTCAGGCTGCTGGCAAGCGTAGCTATGTGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
3UTR-3UTR CCA 90 bp CTAGCAGCCATTCATAAGTCCATCTATGTCTCCAGCCCCACATGGTATCAGCCGCACAGCTTCTGTCACTaGCGTCTGACCCAGGCGGGG +
Preference number: 2 (lower is better)
Translates to: LAAIHKSIYVSSPTWYQPHSFCH*RLTQAG
Trigger: CCCCGCCTGGGTCAGACGCCAGTGACAGAAGCTGTG...CGGCTGATACCATGTGGGGCTGGAGACATAGATGGACTTATGAATGGCTGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000495421.1
ENST00000524776.5
ENST00000527319.1
3UTR-3UTR TCA 90 bp GGGTTGCAGGCAGCTTCCAGCTCACATGGTGCCAGTATAGGCTGGAAGAAGCTAAAGGCCACAGAACGTTaGCGAAGCACGAAGGCAACG +
Preference number: 2 (lower is better)
Translates to: GLQAASSSHGASIGWKKLKATER*RSTKAT
Trigger: CGTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTT...TAGCTTCTTCCAGCCTATACTGGCACCATGTGAGCTGGAAGCTGCCTGCAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495421.1
3UTR-3UTR TCA 90 bp CCAGAGGACAGGCTAATAGCACAAAGACATCCACCTCAGGGAAGTTGGCAAGCTGGGCCTCAAAGGCCTTaGCACAGAGCTCCAAGGCCA +
Preference number: 2 (lower is better)
Translates to: PEDRLIAQRHPPQGSWQAGPQRP*HRAPRP
Trigger: TGGCCTTGGAGCTCTGTGTCAAGGCCTTTGAGGCCC...AGCTTGCCAACTTCCCTGAGGTGGATGTCTTTGTGCTATTAGCCTGTCCTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495421.1
3UTR-3UTR CCA 90 bp GGACAGACCCTCAACTGCAGCCTGGGAACTGGGATTGGCCAAAGGTCCTGGGCTAACAACACGCATTACTaGGCATGTGCTGAGCTTGTG +
Preference number: 2 (lower is better)
Translates to: GQTLNCSLGTGIGQRSWANNTHY*ACAELV
Trigger: CACAAGCTCAGCACATGCCCAGTAATGCGTGTTGTT...AGCCCAGGACCTTTGGCCAATCCCAGTTCCCAGGCTGCAGTTGAGGGTCTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
3UTR-3UTR CCA 90 bp CTAGCAGCCATTCATAAGTCCATCTATGTCTCCAGCCCCACATGGTATCAGCCGGTCAGGTTCCGCAAGTaGGCCAGTGCCTCACGGTGT +
Preference number: 2 (lower is better)
Translates to: LAAIHKSIYVSSPTWYQPVRFRK*ASASRC
Trigger: ACACCGTGAGGCACTGGCCCACTTGCGGAACCTGAC...CGGCTGATACCATGTGGGGCTGGAGACATAGATGGACTTATGAATGGCTGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
3UTR-3UTR TCA 90 bp GCCCCAAATGTCAAGTACGAGTTTGAGAAACCCTGGTCTAGACTGTCTAGCACCCTGGGGGAGTGCTTCTaGTGTCTAGTGGGCAGAGGC +
Preference number: 2 (lower is better)
Translates to: APNVKYEFEKPWSRLSSTLGECF*CLVGRG
Trigger: GCCTCTGCCCACTAGACATCAGAAGCACTCCCCCAG...GGTGCTAGACAGTCTAGACCAGGGTTTCTCAAACTCGTACTTGACATTTGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
3UTR-3UTR CCA 90 bp GTCCAACCAATAGAACTTTCTGCCATGATGGCATATCCTGTAGCTGCACTGTCCAAAGCCTCCAGGGCATaGGCACAGGCCGGCTCACTC +
Preference number: 2 (lower is better)
Translates to: VQPIELSAMMAYPVAALSKASRA*AQAGSL
Trigger: GAGTGAGCCGGCCTGTGCCCATGCCCTGGAGGCTTT...GGACAGTGCAGCTACAGGATATGCCATCATGGCAGAAAGTTCTATTGGTTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495421.1
3UTR-3UTR TCA 90 bp TTATTCCATCAGCCAAACAACACGCATTACTGGGCATGTGCTGAGCTTGTGCCAACGGATCCTATCCTGTaGAGGGCTGCCTGCTCTCCC +
Preference number: 2 (lower is better)
Translates to: LFHQPNNTHYWACAELVPTDPIL*RAACSP
Trigger: GGGAGAGCAGGCAGCCCTTCACAGGATAGGATCCGT...TGGCACAAGCTCAGCACATGCCCAGTAATGCGTGTTGTTTGGCTGATGGAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000527319.1
3UTR-3UTR TCA 90 bp ACCAATAGAACTTTCTGCCATGATGGCATATCCTGTAGCTGCACTGTCCCCTCACTGGGGGAGTGCTTCTaGTGTCTAGTGGGCAGAGGC +
Preference number: 2 (lower is better)
Translates to: TNRTFCHDGISCSCTVPSLGECF*CLVGRG
Trigger: GCCTCTGCCCACTAGACATCAGAAGCACTCCCCCAG...TGAGGGGACAGTGCAGCTACAGGATATGCCATCATGGCAGAAAGTTCTATTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
3UTR-3UTR GCA 90 bp CTGGCCCCAAATGTCAAGTACGAGTTTGAGAAACCCTGGTCTAGACTGTCTAGCCCAAAGGTCCTGGGCTaGCCTCAGGAAGACAGATGG +
Preference number: 2 (lower is better)
Translates to: LAPNVKYEFEKPWSRLSSPKVLG*PQEDRW
Trigger: CCATCTGTCTTCCTGAGGGCAGCCCAGGACCTTTGG...GCTAGACAGTCTAGACCAGGGTTTCTCAAACTCGTACTTGACATTTGGGGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
3UTR-3UTR CCA 90 bp ACACGCATTACTGGGCATGTGCTGAGCTTGTGCCAGTGCCAGGACAGGACAGAGAACAACACGCATTACTaGGCATGTGCTGAGCTTGTG +
Preference number: 2 (lower is better)
Translates to: TRITGHVLSLCQCQDRTENNTHY*ACAELV
Trigger: CACAAGCTCAGCACATGCCCAGTAATGCGTGTTGTT...CTCTGTCCTGTCCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAATGCGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000527319.1
3UTR-3UTR CCA 90 bp ACACGCATTACTGGGCATGTGCTGAGCTTGTGCCAGTGCCAGGACAGGACAGAGGAGTTTGAGAAACCCTaGTCTAGACTGTCTAGCACC +
Preference number: 2 (lower is better)
Translates to: TRITGHVLSLCQCQDRTEEFEKP*SRLSST
Trigger: GGTGCTAGACAGTCTAGACCAGGGTTTCTCAAACTC...CTCTGTCCTGTCCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAATGCGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
3UTR-3UTR CCA 90 bp GCTGAGCACCCTACCATACACCAGACAGCCCCACAACAAAGAATTATCTGGCCCCATCCTCATAGGCGATaGCAATCCCTCGTCTTCCAC +
Preference number: 2 (lower is better)
Translates to: AEHPTIHQTAPQQRIIWPHPHRR*QSLVFH
Trigger: GTGGAAGACGAGGGATTGCCATCGCCTATGAGGATG...GGGCCAGATAATTCTTTGTTGTGGGGCTGTCTGGTGTATGGTAGGGTGCTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495421.1
3UTR-3UTR GCA 90 bp CCAATAGAACTTTCTGCCATGATGGCATATCCTGTAGCTGCACTGTCCCCTCATCCAAAGGTCCTGGGCTaGCCTCAGGAAGACAGATGG +
Preference number: 2 (lower is better)
Translates to: PIELSAMMAYPVAALSPHPKVLG*PQEDRW
Trigger: CCATCTGTCTTCCTGAGGGCAGCCCAGGACCTTTGG...ATGAGGGGACAGTGCAGCTACAGGATATGCCATCATGGCAGAAAGTTCTATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
3UTR-3UTR CCA 90 bp ACCAATAGAACTTTCTGCCATGATGGCATATCCTGTAGCTGCACTGTCCCCTCACCCTCAACTGCAGCCTaGGAACTGGGATTGGCCAAA +
Preference number: 2 (lower is better)
Translates to: TNRTFCHDGISCSCTVPSPSTAA*ELGLAK
Trigger: TTTGGCCAATCCCAGTTCCCAGGCTGCAGTTGAGGG...TGAGGGGACAGTGCAGCTACAGGATATGCCATCATGGCAGAAAGTTCTATTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
3UTR-3UTR CCA 90 bp ATAGACCAACGCTGTCCAACCAATAGAACTTTCTGCCATGATGGCATATCCTGTCCACGCGGGCATCTCTaGCCCTCTCTACCAGATATC +
Preference number: 2 (lower is better)
Translates to: IDQRCPTNRTFCHDGISCPRGHL*PSLPDI
Trigger: GATATCTGGTAGAGAGGGCCAGAGATGCCCGCGTGG...ACAGGATATGCCATCATGGCAGAAAGTTCTATTGGTTGGACAGCGTTGGTCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495421.1
3UTR-3UTR GCA 90 bp ACCAATAGAACTTTCTGCCATGATGGCATATCCTGTAGCTGCACTGTCCCCTCAAGACTGTCTAGCACCTaGCTTTTGACAAGGACAGAC +
Preference number: 2 (lower is better)
Translates to: TNRTFCHDGISCSCTVPSRLSST*LLTRTD
Trigger: GTCTGTCCTTGTCAAAAGGCAGGTGCTAGACAGTCT...TGAGGGGACAGTGCAGCTACAGGATATGCCATCATGGCAGAAAGTTCTATTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
3UTR-3UTR CCA 90 bp ACCAATAGAACTTTCTGCCATGATGGCATATCCTGTAGCTGCACTGTCCCCTCAAACAACACGCATTACTaGGCATGTGCTGAGCTTGTG +
Preference number: 2 (lower is better)
Translates to: TNRTFCHDGISCSCTVPSNNTHY*ACAELV
Trigger: CACAAGCTCAGCACATGCCCAGTAATGCGTGTTGTT...TGAGGGGACAGTGCAGCTACAGGATATGCCATCATGGCAGAAAGTTCTATTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
3UTR-3UTR CCA 90 bp GCTGTCCAACCAATAGAACTTTCTGCCATGATGGCATATCCTGTAGCTGCACTGTTTGGTTGTCACAACTaGGGGAGTGCTTCTGATGTC +
Preference number: 2 (lower is better)
Translates to: AVQPIELSAMMAYPVAALFGCHN*GSASDV
Trigger: GACATCAGAAGCACTCCCCCAGTTGTGACAACCAAA...CAGTGCAGCTACAGGATATGCCATCATGGCAGAAAGTTCTATTGGTTGGACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
3UTR GCA 72 bp GGGCCAGTGCCTCACGGTGTTGGGCTACACCCAGTGTaGCTGCCAGCAGCCCTACCACGCGGGCATCTCTGG +
Preference number: 3 (lower is better)
Translates to: GPVPHGVGLHPV*LPAALPRGHLW
Trigger: CCAGAGATGCCCGCGTGGTAGGGCTGCTGGCAGGCACACTGGGTGTAGCCCAACACCGTGAGGCACTGGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
3UTR TCA 72 bp CCTCGTCTTCCACTCACAGCTTCTGTCACTGGCGTCTaGCCCAGGCGGGGCTCCAGCCCTTGCCAGCTCCGG +
Preference number: 3 (lower is better)
Translates to: PRLPLTASVTGV*PRRGSSPCQLR
Trigger: CCGGAGCTGGCAAGGGCTGGAGCCCCGCCTGGGTCAGACGCCAGTGACAGAAGCTGTGAGTGGAAGACGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000495421.1
ENST00000524776.5
ENST00000527319.1
3UTR GCA 72 bp CAGTGCCTCACGGTGTTGGGCTACACCCAGTGTGCCTaGCAGCAGCCCTACCACGCGGGCATCTCTGGCCCT +
Preference number: 3 (lower is better)
Translates to: QCLTVLGYTQCA*QQPYHAGISGP
Trigger: AGGGCCAGAGATGCCCGCGTGGTAGGGCTGCTGGCAGGCACACTGGGTGTAGCCCAACACCGTGAGGCACTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
3UTR GCA 72 bp GGGTGGGCCGCCCCAGGGCCAACACATAGCTACGCTTaGCAGCAGCCTGAGTCAGGTTCCGCAAGTGGGCCA +
Preference number: 3 (lower is better)
Translates to: GWAAPGPTHSYA*QQPESGSASGP
Trigger: TGGCCCACTTGCGGAACCTGACTCAGGCTGCTGGCAAGCGTAGCTATGTGTTGGCCCTGGGGCGGCCCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
3UTR-3UTR CAA 90 bp AGCTTCTGTCACTGGCGTCTGACCCAGGCGGGGCTCCAGCCCTTGCCAGCTCCGCAGGGGGATGGGAGGTaGGTGCAGGGAGCACTAAAG +
Preference number: 3 (lower is better)
Translates to: SFCHWRLTQAGLQPLPAPQGDGR*VQGALK
Trigger: CTTTAGTGCTCCCTGCACCAACCTCCCATCCCCCTG...CGGAGCTGGCAAGGGCTGGAGCCCCGCCTGGGTCAGACGCCAGTGACAGAAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000495421.1
ENST00000524776.5
ENST00000527319.1
3UTR-3UTR CAA 90 bp GCACGAAGGCAACGGGCAGTGGGCGGGCTGGAGGGCTTAAGCAGGCAGGGCCAAAGCCTGAGCTCCAGCTaGCTCAGCACCCAGCACATC +
Preference number: 3 (lower is better)
Translates to: ARRQRAVGGLEGLSRQGQSLSSS*LSTQHI
Trigger: GATGTGCTGGGTGCTGAGCAAGCTGGAGCTCAGGCT...TTGGCCCTGCCTGCTTAAGCCCTCCAGCCCGCCCACTGCCCGTTGCCTTCGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000532140.1
3UTR CCA 72 bp GTCAGGTTCCGCAAGTGGGCCAGTGCCTCACGGTGTTaGGCTACACCCAGTGTGCCTGCCAGCAGCCCTACC +
Preference number: 3 (lower is better)
Translates to: VRFRKWASASRC*ATPSVPASSPT
Trigger: GGTAGGGCTGCTGGCAGGCACACTGGGTGTAGCCCAACACCGTGAGGCACTGGCCCACTTGCGGAACCTGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
3UTR CCA 72 bp GGCAATCCCTCGTCTTCCACTCACAGCTTCTGTCACTaGCGTCTGACCCAGGCGGGGCTCCAGCCCTTGCCA +
Preference number: 3 (lower is better)
Translates to: GNPSSSTHSFCH*RLTQAGLQPLP
Trigger: TGGCAAGGGCTGGAGCCCCGCCTGGGTCAGACGCCAGTGACAGAAGCTGTGAGTGGAAGACGAGGGATTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000495421.1
ENST00000524776.5
ENST00000527319.1
3UTR-3UTR CAA 90 bp GCCTCCAGGGCATGGGCACAGGCCGGCTCACTCAGCAGCACCACAGGCGCTTTGCAAGGCCACAGAACGTaGACGAAGCACGAAGGCAAC +
Preference number: 3 (lower is better)
Translates to: ASRAWAQAGSLSSTTGALQGHRT*TKHEGN
Trigger: GTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTTG...CAAAGCGCCTGTGGTGCTGCTGAGTGAGCCGGCCTGTGCCCATGCCCTGGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
3UTR-3UTR CAA 90 bp AGCTTCTGTCACTGGCGTCTGACCCAGGCGGGGCTCCAGCCCTTGCCAGCTCCGCAAGGCCACAGAACGTaGACGAAGCACGAAGGCAAC +
Preference number: 3 (lower is better)
Translates to: SFCHWRLTQAGLQPLPAPQGHRT*TKHEGN
Trigger: GTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTTG...CGGAGCTGGCAAGGGCTGGAGCCCCGCCTGGGTCAGACGCCAGTGACAGAAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495421.1
3UTR-3UTR CAA 90 bp GTTGTCACAACTGGGGGAGTGCTTCTGATGTCTAGTGGGCAGAGGCCAGGGATGGGGAAGTTGGCAAGCTaGGCAGGGGTGGGCCGCCCC +
Preference number: 3 (lower is better)
Translates to: VVTTGGVLLMSSGQRPGMGKLAS*AGVGRP
Trigger: GGGGCGGCCCACCCCTGCCAAGCTTGCCAACTTCCC...CATCCCTGGCCTCTGCCCACTAGACATCAGAAGCACTCCCCCAGTTGTGACAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495421.1
3UTR-3UTR CAA 90 bp GACCCTCAACTGCAGCCTGGGAACTGGGATTGGCCAAAGGTCCTGGGCTGCCCTCAGGGGGATGGGAGGTaGGTGCAGGGAGCACTAAAG +
Preference number: 3 (lower is better)
Translates to: DPQLQPGNWDWPKVLGCPQGDGR*VQGALK
Trigger: CTTTAGTGCTCCCTGCACCAACCTCCCATCCCCCTG...AGGGCAGCCCAGGACCTTTGGCCAATCCCAGTTCCCAGGCTGCAGTTGAGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
3UTR TCA 72 bp CGTGCCCTTAGCCGTCCAGCCCGGGCACCCTCATCCTaGGTCTTCCCTGTATCTGGACAGCAGGAGGAGAAG +
Preference number: 3 (lower is better)
Translates to: RALSRPARAPSS*VFPVSGQQEEK
Trigger: CTTCTCCTCCTGCTGTCCAGATACAGGGAAGACTCAGGATGAGGGTGCCCGGGCTGGACGGCTAAGGGCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
3UTR CCA 72 bp CTCAGCAGCACCACAGGCGCTTTGGGGTCTGGGTTCTaGGCCTCAAAGGCCTTGACACAGAGCTCCAAGGCC +
Preference number: 3 (lower is better)
Translates to: LSSTTGALGSGF*ASKALTQSSKA
Trigger: GGCCTTGGAGCTCTGTGTCAAGGCCTTTGAGGCCCAGAACCCAGACCCCAAAGCGCCTGTGGTGCTGCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
3UTR CCA 72 bp CCCTGTATCTGGACAGCAGGAGGAGAAGGGTTGACCTaGTGCCCACCCCAAGAGCAGCCGACTCAGGTCTGG +
Preference number: 3 (lower is better)
Translates to: PCIWTAGGEGLT*CPPQEQPTQVW
Trigger: CCAGACCTGAGTCGGCTGCTCTTGGGGTGGGCACCAGGTCAACCCTTCTCCTCCTGCTGTCCAGATACAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
3UTR CCA 72 bp GCACAAAGACATCCACCTCAGGGAAGTTGGCAAGCTTaGCAGGGGTGGGCCGCCCCAGGGCCAACACATAGC +
Preference number: 3 (lower is better)
Translates to: AQRHPPQGSWQA*QGWAAPGPTHS
Trigger: GCTATGTGTTGGCCCTGGGGCGGCCCACCCCTGCCAAGCTTGCCAACTTCCCTGAGGTGGATGTCTTTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
3UTR-3UTR CAA 90 bp GCCTCACGGTGTTGGGCTACACCCAGTGTGCCTGCCAGCAGCCCTACCACGCGGTCTAGCACCTGCCTTTaGACAAGGACAGACCCTCAA +
Preference number: 3 (lower is better)
Translates to: ASRCWATPSVPASSPTTRSSTCL*TRTDPQ
Trigger: TTGAGGGTCTGTCCTTGTCAAAAGGCAGGTGCTAGA...CCGCGTGGTAGGGCTGCTGGCAGGCACACTGGGTGTAGCCCAACACCGTGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495421.1
3UTR-3UTR CAA 90 bp AGAGCTCCAAGGCCACAGAACGTTGACGAAGCACGAAGGCAACGGGCAGTGGGCAGCCTGAGCTCCAGCTaGCTCAGCACCCAGCACATC +
Preference number: 3 (lower is better)
Translates to: RAPRPQNVDEARRQRAVGSLSSS*LSTQHI
Trigger: GATGTGCTGGGTGCTGAGCAAGCTGGAGCTCAGGCT...GCCCACTGCCCGTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTTGGAGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000532140.1
3UTR GCA 72 bp TGTATCTGGACAGCAGGAGGAGAAGGGTTGACCTGGTaGCCACCCCAAGAGCAGCCGACTCAGGTCTGGGTC +
Preference number: 3 (lower is better)
Translates to: CIWTAGGEGLTW*PPQEQPTQVWV
Trigger: GACCCAGACCTGAGTCGGCTGCTCTTGGGGTGGGCACCAGGTCAACCCTTCTCCTCCTGCTGTCCAGATACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
3UTR CCA 72 bp CCCCAAGAGCAGCCGACTCAGGTCTGGGTCAAGGTCTaGGTCAGGGCTGGCCTTAGAGCCCCCTACATAGAA +
Preference number: 3 (lower is better)
Translates to: PQEQPTQVWVKV*VRAGLRAPYIE
Trigger: TTCTATGTAGGGGGCTCTAAGGCCAGCCCTGACCCAGACCTTGACCCAGACCTGAGTCGGCTGCTCTTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495421.1
3UTR CCA 72 bp AGCCCGGGCACCCTCATCCTGAGTCTTCCCTGTATCTaGACAGCAGGAGGAGAAGGGTTGACCTGGTGCCCA +
Preference number: 3 (lower is better)
Translates to: SPGTLILSLPCI*TAGGEGLTWCP
Trigger: TGGGCACCAGGTCAACCCTTCTCCTCCTGCTGTCCAGATACAGGGAAGACTCAGGATGAGGGTGCCCGGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
3UTR CCA 72 bp GTGTGCCTGCCAGCAGCCCTACCACGCGGGCATCTCTaGCCCTCTCTACCAGATATCGTCTTCGTGCCCTTA +
Preference number: 3 (lower is better)
Translates to: VCLPAALPRGHL*PSLPDIVFVPL
Trigger: TAAGGGCACGAAGACGATATCTGGTAGAGAGGGCCAGAGATGCCCGCGTGGTAGGGCTGCTGGCAGGCACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
3UTR-3UTR CAA 90 bp GGGGATGGGAGGTTGGTGCAGGGAGCACTAAAGGTCCTAGCAGCCATTCATAAGCAGGGGGATGGGAGGTaGGTGCAGGGAGCACTAAAG +
Preference number: 3 (lower is better)
Translates to: GDGRLVQGALKVLAAIHKQGDGR*VQGALK
Trigger: CTTTAGTGCTCCCTGCACCAACCTCCCATCCCCCTG...CTTATGAATGGCTGCTAGGACCTTTAGTGCTCCCTGCACCAACCTCCCATCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000524776.5
ENST00000527319.1
3UTR TCA 72 bp GGGCTTAAGCAGGCAGGGCCAAAATGTATGAGAGCCTaGGCTCCAGCTTGCTCAGCACCCAGCACATCCACG +
Preference number: 3 (lower is better)
Translates to: GLKQAGPKCMRA*APACSAPSTST
Trigger: CGTGGATGTGCTGGGTGCTGAGCAAGCTGGAGCTCAGGCTCTCATACATTTTGGCCCTGCCTGCTTAAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000532140.1
3UTR TCA 72 bp GCTGCCGTAGGCTGTGTCACCCAGAATGAACATCTTTaGCCCTGTCGTCTCCTCCAGTCGTGCAGCCACAGC +
Preference number: 3 (lower is better)
Translates to: AAVGCVTQNEHL*PCRLLQSCSHS
Trigger: GCTGTGGCTGCACGACTGGAGGAGACGACAGGGTCAAAGATGTTCATTCTGGGTGACACAGCCTACGGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532140.1
3UTR TCA 72 bp CCACGCAGCAGCTGCCGTAGGCTGTGTCACCCAGAATaGACATCTTTGACCCTGTCGTCTCCTCCAGTCGTG +
Preference number: 3 (lower is better)
Translates to: PRSSCRRLCHPE*TSLTLSSPPVV
Trigger: CACGACTGGAGGAGACGACAGGGTCAAAGATGTTCATTCTGGGTGACACAGCCTACGGCAGCTGCTGCGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532140.1
3UTR-3UTR CAA 90 bp GCTGAGCACCCTACCATACACCAGACAGCCCCACAACAAAGAATTATCTGGCCCCAGGGGGATGGGAGGTaGGTGCAGGGAGCACTAAAG +
Preference number: 3 (lower is better)
Translates to: AEHPTIHQTAPQQRIIWPQGDGR*VQGALK
Trigger: CTTTAGTGCTCCCTGCACCAACCTCCCATCCCCCTG...GGGCCAGATAATTCTTTGTTGTGGGGCTGTCTGGTGTATGGTAGGGTGCTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
3UTR-3UTR CAA 90 bp CTAGCAGCCATTCATAAGTCCATCTATGTCTCCAGCCCCACATGGTATCAGCCGCAGTGCCTCACGGTGTaGGGCTACACCCAGTGTGCC +
Preference number: 3 (lower is better)
Translates to: LAAIHKSIYVSSPTWYQPQCLTV*GYTQCA
Trigger: GGCACACTGGGTGTAGCCCAACACCGTGAGGCACTG...CGGCTGATACCATGTGGGGCTGGAGACATAGATGGACTTATGAATGGCTGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
3UTR-3UTR CAA 90 bp TTCCATCAGCCAAACAACACGCATTACTGGGCATGTGCTGAGCTTGTGCCAGTGCAGGGGGATGGGAGGTaGGTGCAGGGAGCACTAAAG +
Preference number: 3 (lower is better)
Translates to: FHQPNNTHYWACAELVPVQGDGR*VQGALK
Trigger: CTTTAGTGCTCCCTGCACCAACCTCCCATCCCCCTG...CACTGGCACAAGCTCAGCACATGCCCAGTAATGCGTGTTGTTTGGCTGATGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000527319.1
3UTR-3UTR CAA 90 bp TTCATAAGTCCATCTATGTCTCCAGCCCCACATGGTATCAGCCGCTTCCCTCATGGGCATGTGCTGAGCTaGTGCCAGTGCCAGGACAGG +
Preference number: 3 (lower is better)
Translates to: FISPSMSPAPHGISRFPHGHVLS*CQCQDR
Trigger: CCTGTCCTGGCACTGGCACAAGCTCAGCACATGCCC...ATGAGGGAAGCGGCTGATACCATGTGGGGCTGGAGACATAGATGGACTTATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000527319.1
3UTR-3UTR CAA 90 bp GGCTCCAGCCCTTGCCAGCTCCGGGAACTAAGGAATGAGGCTGCAGGACTGCTCATGTCAAGTACGAGTTaGAGAAACCCTGGTCTAGAC +
Preference number: 3 (lower is better)
Translates to: GSSPCQLRELRNEAAGLLMSSTS*RNPGLD
Trigger: GTCTAGACCAGGGTTTCTCAAACTCGTACTTGACAT...GAGCAGTCCTGCAGCCTCATTCCTTAGTTCCCGGAGCTGGCAAGGGCTGGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495421.1
3UTR-3UTR CAA 90 bp CCAATAGAACTTTCTGCCATGATGGCATATCCTGTAGCTGCACTGTCCCCTCATGGGCATGTGCTGAGCTaGTGCCAGTGCCAGGACAGG +
Preference number: 3 (lower is better)
Translates to: PIELSAMMAYPVAALSPHGHVLS*CQCQDR
Trigger: CCTGTCCTGGCACTGGCACAAGCTCAGCACATGCCC...ATGAGGGGACAGTGCAGCTACAGGATATGCCATCATGGCAGAAAGTTCTATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
3UTR-3UTR CAA 90 bp GCTGTCCAACCAATAGAACTTTCTGCCATGATGGCATATCCTGTAGCTGCACTGGCCTGGGAACTGGGATaGGCCAAAGGTCCTGGGCTG +
Preference number: 3 (lower is better)
Translates to: AVQPIELSAMMAYPVAALAWELG*AKGPGL
Trigger: CAGCCCAGGACCTTTGGCCAATCCCAGTTCCCAGGC...CAGTGCAGCTACAGGATATGCCATCATGGCAGAAAGTTCTATTGGTTGGACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
3UTR CCA 72 bp CATGGTATCAGCCGCTTCCCTCATCCTCATAGGCGATaGCAATCCCTCGTCTTCCACTCACAGCTTCTGTCA +
Preference number: 3 (lower is better)
Translates to: HGISRFPHPHRR*QSLVFHSQLLS
Trigger: TGACAGAAGCTGTGAGTGGAAGACGAGGGATTGCCATCGCCTATGAGGATGAGGGAAGCGGCTGATACCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000495421.1
ENST00000524776.5
ENST00000527319.1
3UTR TCA 72 bp AGAAACCCTGGTCTAGACTGTCTAGCACCTGCCTTTTaGCAAGGACAGACCCTCAACTGCAGCCTGGGAACT +
Preference number: 3 (lower is better)
Translates to: RNPGLDCLAPAF*QGQTLNCSLGT
Trigger: AGTTCCCAGGCTGCAGTTGAGGGTCTGTCCTTGTCAAAAGGCAGGTGCTAGACAGTCTAGACCAGGGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
3UTR CCA 72 bp AGCCCTTTATTCCATCAGCCAAACAACACGCATTACTaGGCATGTGCTGAGCTTGTGCCAGTGCCAGGACAG +
Preference number: 3 (lower is better)
Translates to: SPLFHQPNNTHY*ACAELVPVPGQ
Trigger: CTGTCCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAATGCGTGTTGTTTGGCTGATGGAATAAAGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
ENST00000527319.1
3UTR-3UTR CAA 90 bp GCTGAGCACCCTACCATACACCAGACAGCCCCACAACAAAGAATTATCTGGCCCTCTAGCACCTGCCTTTaGACAAGGACAGACCCTCAA +
Preference number: 3 (lower is better)
Translates to: AEHPTIHQTAPQQRIIWPSSTCL*TRTDPQ
Trigger: TTGAGGGTCTGTCCTTGTCAAAAGGCAGGTGCTAGA...GGGCCAGATAATTCTTTGTTGTGGGGCTGTCTGGTGTATGGTAGGGTGCTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
3UTR GCA 72 bp GAGTTTGAGAAACCCTGGTCTAGACTGTCTAGCACCTaGCTTTTGACAAGGACAGACCCTCAACTGCAGCCT +
Preference number: 3 (lower is better)
Translates to: EFEKPWSRLSST*LLTRTDPQLQP
Trigger: AGGCTGCAGTTGAGGGTCTGTCCTTGTCAAAAGGCAGGTGCTAGACAGTCTAGACCAGGGTTTCTCAAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
3UTR-3UTR CAA 90 bp CTAGCAGCCATTCATAAGTCCATCTATGTCTCCAGCCCCACATGGTATCAGCCGAGCTTCCATGATCATTaGATGACTTCCAGGCAGGTG +
Preference number: 3 (lower is better)
Translates to: LAAIHKSIYVSSPTWYQPSFHDH*MTSRQV
Trigger: CACCTGCCTGGAAGTCATCAAATGATCATGGAAGCT...CGGCTGATACCATGTGGGGCTGGAGACATAGATGGACTTATGAATGGCTGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000495421.1
ENST00000524776.5
ENST00000527319.1
3UTR GCA 72 bp AGTATAGACCAACGCTGTCCAACCAATAGAACTTTCTaGCATGATGGCATATCCTGTAGCTGCACTGTCCCC +
Preference number: 3 (lower is better)
Translates to: SIDQRCPTNRTF*HDGISCSCTVP
Trigger: GGGGACAGTGCAGCTACAGGATATGCCATCATGGCAGAAAGTTCTATTGGTTGGACAGCGTTGGTCTATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
3UTR-3UTR CAA 90 bp GTCCAACCAATAGAACTTTCTGCCATGATGGCATATCCTGTAGCTGCACTGTCCGGTCTGGAGATATTTTaGGTTGTCACAACTGGGGGA +
Preference number: 3 (lower is better)
Translates to: VQPIELSAMMAYPVAALSGLEIF*VVTTGG
Trigger: TCCCCCAGTTGTGACAACCAAAAATATCTCCAGACC...GGACAGTGCAGCTACAGGATATGCCATCATGGCAGAAAGTTCTATTGGTTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR GCA 90 bp CTCCAGGGCATGGGCACAGGCCGGCTCACTCAGCAGCACCACAGGCGCTTTGGGGCTTGGGTGGTGGGATaGAGCGGGGACCTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: LQGMGTGRLTQQHHRRFGAWVVG*SGDLPG
Trigger: CCCAGGGAGGTCCCCGCTGCATCCCACCACCCAAGC...CCCAAAGCGCCTGTGGTGCTGCTGAGTGAGCCGGCCTGTGCCCATGCCCTGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
CDS-3UTR GCA 90 bp GTCCAGGTACCGTGGGCGCAGGAGAGTAGCCAAAGCCTCCAGGGCATGGGCACAACCCCGGTCTCTCGCTaGAGCGCCGCCTCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: VQVPWAQESSQSLQGMGTTPVSR*SAASAG
Trigger: CCCTGCCGAGGCGGCGCTGCAGCGAGAGACCGGGGT...TGTGCCCATGCCCTGGAGGCTTTGGCTACTCTCCTGCGCCCACGGTACCTGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
CDS-3UTR GCA 90 bp CAGCTTGCTCAGCACCCAGCACATCCACGCAGCAGCTGCCGTAGGCTGTGTCACACCCCGGTCTCTCGCTaGAGCGCCGCCTCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: QLAQHPAHPRSSCRRLCHTPVSR*SAASAG
Trigger: CCCTGCCGAGGCGGCGCTGCAGCGAGAGACCGGGGT...GTGACACAGCCTACGGCAGCTGCTGCGTGGATGTGCTGGGTGCTGAGCAAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532140.1
CDS-3UTR CCA 90 bp TCCAGGGCATGGGCACAGGCCGGCTCACTCAGCAGCACCACAGGCGCTTTGGGGGCACAGCTTGGGTGGTaGGATGCAGCGGGGACCTCC +
Preference number: 4 (lower is better)
Translates to: SRAWAQAGSLSSTTGALGAQLGW*DAAGTS
Trigger: GGAGGTCCCCGCTGCATCCCACCACCCAAGCTGTGC...CCCCAAAGCGCCTGTGGTGCTGCTGAGTGAGCCGGCCTGTGCCCATGCCCTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
CDS-3UTR GCA 90 bp GCCAGTGCCAGGACAGGACAGAGACGGATCCTATCCTGTGAAGGGCTGCCTGCTACCCCGGTCTCTCGCTaGAGCGCCGCCTCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: ASARTGQRRILSCEGLPATPVSR*SAASAG
Trigger: CCCTGCCGAGGCGGCGCTGCAGCGAGAGACCGGGGT...AGCAGGCAGCCCTTCACAGGATAGGATCCGTCTCTGTCCTGTCCTGGCACTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
ENST00000524776.5
CDS-3UTR GCA 90 bp TCTACCAGATATCGTCTTCGTGCCCTTAGCCGTCCAGCCCGGGCACCCTCATCCACCCCGGTCTCTCGCTaGAGCGCCGCCTCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: STRYRLRALSRPARAPSSTPVSR*SAASAG
Trigger: CCCTGCCGAGGCGGCGCTGCAGCGAGAGACCGGGGT...GGATGAGGGTGCCCGGGCTGGACGGCTAAGGGCACGAAGACGATATCTGGTAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CCA 90 bp TCCAGGGCATGGGCACAGGCCGGCTCACTCAGCAGCACCACAGGCGCTTTGGGGAAAGCCTCCAGGGCATaGGCACAGGCCGGCTCACTC +
Preference number: 4 (lower is better)
Translates to: SRAWAQAGSLSSTTGALGKASRA*AQAGSL
Trigger: GAGTGAGCCGGCCTGTGCCCATGCCCTGGAGGCTTT...CCCCAAAGCGCCTGTGGTGCTGCTGAGTGAGCCGGCCTGTGCCCATGCCCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
CDS-3UTR GCA 90 bp CACAGAGCTCCAAGGCCACAGAACGTTGACGAAGCACGAAGGCAACGGGCAGTGACCCCGGTCTCTCGCTaGAGCGCCGCCTCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: HRAPRPQNVDEARRQRAVTPVSR*SAASAG
Trigger: CCCTGCCGAGGCGGCGCTGCAGCGAGAGACCGGGGT...CACTGCCCGTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTTGGAGCTCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
CDS-3UTR CCA 90 bp CTCCAAGGCCACAGAACGTTGACGAAGCACGAAGGCAACGGGCAGTGGGCGGGCGAGGCACAGCTTGGGTaGTGGGATGCAGCGGGGACC +
Preference number: 4 (lower is better)
Translates to: LQGHRTLTKHEGNGQWAGEAQLG*WDAAGT
Trigger: GGTCCCCGCTGCATCCCACCACCCAAGCTGTGCCTC...GCCCGCCCACTGCCCGTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
ENST00000532140.1
CDS-3UTR CCA 90 bp GCCTCACGGTGTTGGGCTACACCCAGTGTGCCTGCCAGCAGCCCTACCACGCGGAGGAGTAAGCAGTCCTaGCACCCCGGTCTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: ASRCWATPSVPASSPTTRRSKQS*HPGLSL
Trigger: CAGCGAGAGACCGGGGTGCCAGGACTGCTTACTCCT...CCGCGTGGTAGGGCTGCTGGCAGGCACACTGGGTGTAGCCCAACACCGTGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CCA 90 bp GCACGAAGGCAACGGGCAGTGGGCGGGCTGGAGGGCTTAAGCAGGCAGGGCCAAAGGCGCTTTGGGGTCTaGGTTCTGGGCCTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: ARRQRAVGGLEGLSRQGQRRFGV*VLGLKG
Trigger: GCCTTTGAGGCCCAGAACCCAGACCCCAAAGCGCCT...TTGGCCCTGCCTGCTTAAGCCCTCCAGCCCGCCCACTGCCCGTTGCCTTCGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476260.1
ENST00000492306.5
CDS-3UTR CCA 90 bp AGGTACCGTGGGCGCAGGAGAGTAGCCAAAGCCTCCAGGGCATGGGCACAGGCCGCACCACAGGCGCTTTaGGGTCTGGGTTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: RYRGRRRVAKASRAWAQAAPQAL*GLGSGP
Trigger: AGGCCCAGAACCCAGACCCCAAAGCGCCTGTGGTGC...GGCCTGTGCCCATGCCCTGGAGGCTTTGGCTACTCTCCTGCGCCCACGGTACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
CDS-3UTR CCA 90 bp TTCTGTCACTGGCGTCTGACCCAGGCGGGGCTCCAGCCCTTGCCAGCTCCGGGACAGCCGACTCAGGTCTaGGTCAAGGTCTGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: FCHWRLTQAGLQPLPAPGQPTQV*VKVWVR
Trigger: CCTGACCCAGACCTTGACCCAGACCTGAGTCGGCTG...TCCCGGAGCTGGCAAGGGCTGGAGCCCCGCCTGGGTCAGACGCCAGTGACAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CCA 90 bp AGTTGGCAAGCTTGGCAGGGGTGGGCCGCCCCAGGGCCAACACATAGCTACGCTCTCCAGCTGGGGCCGTaGGGTCAGAGCCAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: SWQAWQGWAAPGPTHSYALQLGP*GQSQAS
Trigger: GGAAGCTTGGCTCTGACCCCACGGCCCCAGCTGGAG...AGCGTAGCTATGTGTTGGCCCTGGGGCGGCCCACCCCTGCCAAGCTTGCCAACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CCA 90 bp GGCTCCAGCCCTTGCCAGCTCCGGGAACTAAGGAATGAGGCTGCAGGACTGCTCTCAGCCAGCTCCAGCTaGGGCCGTGGGGTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: GSSPCQLRELRNEAAGLLSASSS*GRGVRA
Trigger: GGCTCTGACCCCACGGCCCCAGCTGGAGCTGGCTGA...GAGCAGTCCTGCAGCCTCATTCCTTAGTTCCCGGAGCTGGCAAGGGCTGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000495421.1
ENST00000524776.5
ENST00000527319.1
CDS-3UTR GCA 90 bp TGGGCTGCCCTCAGGAAGACAGATGGGTCCAGAGGCCTCAGGGAAGTCCCTAAGGCTTGGGTGGTGGGATaGAGCGGGGACCTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: WAALRKTDGSRGLREVPKAWVVG*SGDLPG
Trigger: CCCAGGGAGGTCCCCGCTGCATCCCACCACCCAAGC...CTTAGGGACTTCCCTGAGGCCTCTGGACCCATCTGTCTTCCTGAGGGCAGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR GCA 90 bp AGGTACCGTGGGCGCAGGAGAGTAGCCAAAGCCTCCAGGGCATGGGCACAGGCCCGTCTCCTCCAGTCGTaGAGCCACAGCCACAGCATC +
Preference number: 4 (lower is better)
Translates to: RYRGRRRVAKASRAWAQARLLQS*SHSHSI
Trigger: GATGCTGTGGCTGTGGCTGCACGACTGGAGGAGACG...GGCCTGTGCCCATGCCCTGGAGGCTTTGGCTACTCTCCTGCGCCCACGGTACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
CDS-3UTR GCA 90 bp TCCGCAAGTGGGCCAGTGCCTCACGGTGTTGGGCTACACCCAGTGTGCCTGCCAGGGCTACACCCAGTGTaGCTGCCAGCAGCCCTACCA +
Preference number: 4 (lower is better)
Translates to: SASGPVPHGVGLHPVCLPGLHPV*LPAALP
Trigger: TGGTAGGGCTGCTGGCAGGCACACTGGGTGTAGCCC...TGGCAGGCACACTGGGTGTAGCCCAACACCGTGAGGCACTGGCCCACTTGCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CCA 90 bp CTTGCTCAGCACCCAGCACATCCACGCAGCAGCTGCCGTAGGCTGTGTCACCCAGAGGCACAGCTTGGGTaGTGGGATGCAGCGGGGACC +
Preference number: 4 (lower is better)
Translates to: LAQHPAHPRSSCRRLCHPEAQLG*WDAAGT
Trigger: GGTCCCCGCTGCATCCCACCACCCAAGCTGTGCCTC...TGGGTGACACAGCCTACGGCAGCTGCTGCGTGGATGTGCTGGGTGCTGAGCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532140.1
CDS-3UTR CCA 90 bp TGGGCTGCCCTCAGGAAGACAGATGGGTCCAGAGGCCTCAGGGAAGTCCCTAAGTCAGCCAGCTCCAGCTaGGGCCGTGGGGTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: WAALRKTDGSRGLREVPKSASSS*GRGVRA
Trigger: GGCTCTGACCCCACGGCCCCAGCTGGAGCTGGCTGA...CTTAGGGACTTCCCTGAGGCCTCTGGACCCATCTGTCTTCCTGAGGGCAGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
3UTR CAA 72 bp GCACAGGCCGGCTCACTCAGCAGCACCACAGGCGCTTaGGGGTCTGGGTTCTGGGCCTCAAAGGCCTTGACA +
Preference number: 4 (lower is better)
Translates to: AQAGSLSSTTGA*GSGFWASKALT
Trigger: TGTCAAGGCCTTTGAGGCCCAGAACCCAGACCCCAAAGCGCCTGTGGTGCTGCTGAGTGAGCCGGCCTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
CDS-3UTR TCA 90 bp CTCCAAGGCCACAGAACGTTGACGAAGCACGAAGGCAACGGGCAGTGGGCGGGCGGGCCTCAAAGGCCTTaGCACAGAGCTCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: LQGHRTLTKHEGNGQWAGGPQRP*HRAPRP
Trigger: TGGCCTTGGAGCTCTGTGTCAAGGCCTTTGAGGCCC...GCCCGCCCACTGCCCGTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
CDS-3UTR GCA 90 bp GAGCTCCAGCTTGCTCAGCACCCAGCACATCCACGCAGCAGCTGCCGTAGGCTGCGTCTCCTCCAGTCGTaGAGCCACAGCCACAGCATC +
Preference number: 4 (lower is better)
Translates to: ELQLAQHPAHPRSSCRRLRLLQS*SHSHSI
Trigger: GATGCTGTGGCTGTGGCTGCACGACTGGAGGAGACG...CAGCCTACGGCAGCTGCTGCGTGGATGTGCTGGGTGCTGAGCAAGCTGGAGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532140.1
CDS-3UTR GCA 90 bp CGTCTGGGGTTTCCCACAGCTCTGACTCAGGTGGTGGGAGAGCCACGTGGAAGGGAAGGGTTGACCTGGTaGCCACCCCAAGAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: RLGFPTALTQVVGEPRGREGLTW*PPQEQP
Trigger: CGGCTGCTCTTGGGGTGGGCACCAGGTCAACCCTTC...CCTTCCACGTGGCTCTCCCACCACCTGAGTCAGAGCTGTGGGAAACCCCAGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR GCA 90 bp CGTCTGGGGTTTCCCACAGCTCTGACTCAGGTGGTGGGAGAGCCACGTGGAAGGGGGCTACACCCAGTGTaGCTGCCAGCAGCCCTACCA +
Preference number: 4 (lower is better)
Translates to: RLGFPTALTQVVGEPRGRGLHPV*LPAALP
Trigger: TGGTAGGGCTGCTGGCAGGCACACTGGGTGTAGCCC...CCTTCCACGTGGCTCTCCCACCACCTGAGTCAGAGCTGTGGGAAACCCCAGACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR GCA 90 bp GACCCTCAACTGCAGCCTGGGAACTGGGATTGGCCAAAGGTCCTGGGCTGCCCTCCGCAAGTGGGCCAGTaGCTCACGGTGTTGGGCTAC +
Preference number: 4 (lower is better)
Translates to: DPQLQPGNWDWPKVLGCPPQVGQ*LTVLGY
Trigger: GTAGCCCAACACCGTGAGGCACTGGCCCACTTGCGG...AGGGCAGCCCAGGACCTTTGGCCAATCCCAGTTCCCAGGCTGCAGTTGAGGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255108.8
ENST00000495421.1
CDS-3UTR GCA 90 bp CTCGTCTTCCACTCACAGCTTCTGTCACTGGCGTCTGACCCAGGCGGGGCTCCAGTGGCCAGGCAGGGTTaGAGGCAGCTTCCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: LVFHSQLLSLASDPGGAPVARQG*RQLPAH
Trigger: GTGAGCTGGAAGCTGCCTGCAACCCTGCCTGGCCAC...TGGAGCCCCGCCTGGGTCAGACGCCAGTGACAGAAGCTGTGAGTGGAAGACGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR GCA 90 bp GTGCCAGTGCCAGGACAGGACAGAGACGGATCCTATCCTGTGAAGGGCTGCCTGCGGGGCTCCAGCCCTTaGCAGCTCCGGGAACTAAGG +
Preference number: 4 (lower is better)
Translates to: VPVPGQDRDGSYPVKGCLRGSSP*QLRELR
Trigger: CCTTAGTTCCCGGAGCTGGCAAGGGCTGGAGCCCCG...CAGGCAGCCCTTCACAGGATAGGATCCGTCTCTGTCCTGTCCTGGCACTGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000524776.5
ENST00000527319.1
CDS-3UTR GCA 90 bp TCTGGGGTTTCCCACAGCTCTGACTCAGGTGGTGGGAGAGCCACGTGGAAGGGACGGGGCTCCAGCCCTTaGCAGCTCCGGGAACTAAGG +
Preference number: 4 (lower is better)
Translates to: SGVSHSSDSGGGRATWKGRGSSP*QLRELR
Trigger: CCTTAGTTCCCGGAGCTGGCAAGGGCTGGAGCCCCG...TCCCTTCCACGTGGCTCTCCCACCACCTGAGTCAGAGCTGTGGGAAACCCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR GCA 90 bp GGAATGAGGCTGCAGGACTGCTCTCAGCCAGCTCCAGCTGGGGCCGTGGGGTCACTGAGCTTGTGCCAGTaGCAGGACAGGACAGAGACG +
Preference number: 4 (lower is better)
Translates to: GMRLQDCSQPAPAGAVGSLSLCQ*QDRTET
Trigger: CGTCTCTGTCCTGTCCTGGCACTGGCACAAGCTCAG...TGACCCCACGGCCCCAGCTGGAGCTGGCTGAGAGCAGTCCTGCAGCCTCATTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000527319.1
CDS-3UTR CCA 90 bp AGAGCTCCAAGGCCACAGAACGTTGACGAAGCACGAAGGCAACGGGCAGTGGGCGCACAGCTTGGGTGGTaGGATGCAGCGGGGACCTCC +
Preference number: 4 (lower is better)
Translates to: RAPRPQNVDEARRQRAVGAQLGW*DAAGTS
Trigger: GGAGGTCCCCGCTGCATCCCACCACCCAAGCTGTGC...GCCCACTGCCCGTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTTGGAGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
ENST00000532140.1
CDS-3UTR CCA 90 bp TGGGCTGCCCTCAGGAAGACAGATGGGTCCAGAGGCCTCAGGGAAGTCCCTAAGGAGGCACAGCTTGGGTaGTGGGATGCAGCGGGGACC +
Preference number: 4 (lower is better)
Translates to: WAALRKTDGSRGLREVPKEAQLG*WDAAGT
Trigger: GGTCCCCGCTGCATCCCACCACCCAAGCTGTGCCTC...CTTAGGGACTTCCCTGAGGCCTCTGGACCCATCTGTCTTCCTGAGGGCAGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CCA 90 bp AGAGCTCCAAGGCCACAGAACGTTGACGAAGCACGAAGGCAACGGGCAGTGGGCGAGGCACAGCTTGGGTaGTGGGATGCAGCGGGGACC +
Preference number: 4 (lower is better)
Translates to: RAPRPQNVDEARRQRAVGEAQLG*WDAAGT
Trigger: GGTCCCCGCTGCATCCCACCACCCAAGCTGTGCCTC...GCCCACTGCCCGTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTTGGAGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
ENST00000532140.1
CDS-3UTR CCA 90 bp GAACTAAGGAATGAGGCTGCAGGACTGCTCTCAGCCAGCTCCAGCTGGGGCCGTGAGGCACAGCTTGGGTaGTGGGATGCAGCGGGGACC +
Preference number: 4 (lower is better)
Translates to: ELRNEAAGLLSASSSWGREAQLG*WDAAGT
Trigger: GGTCCCCGCTGCATCCCACCACCCAAGCTGTGCCTC...ACGGCCCCAGCTGGAGCTGGCTGAGAGCAGTCCTGCAGCCTCATTCCTTAGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CCA 90 bp ACGAAGGCAACGGGCAGTGGGCGGGCTGGAGGGCTTAAGCAGGCAGGGCCAAAAAGGAGTAAGCAGTCCTaGCACCCCGGTCTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: TKATGSGRAGGLKQAGPKRSKQS*HPGLSL
Trigger: CAGCGAGAGACCGGGGTGCCAGGACTGCTTACTCCT...TTTTGGCCCTGCCTGCTTAAGCCCTCCAGCCCGCCCACTGCCCGTTGCCTTCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000532140.1
CDS-3UTR CCA 90 bp GCCTCCAGGGCATGGGCACAGGCCGGCTCACTCAGCAGCACCACAGGCGCTTTGACTCAGGGAACCCACTaGTTGGGGAAAAGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: ASRAWAQAGSLSSTTGALTQGTH*LGKSWA
Trigger: AGCCCAGCTTTTCCCCAACCAGTGGGTTCCCTGAGT...CAAAGCGCCTGTGGTGCTGCTGAGTGAGCCGGCCTGTGCCCATGCCCTGGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
CDS-3UTR CCA 90 bp CCTCCAGGGCATGGGCACAGGCCGGCTCACTCAGCAGCACCACAGGCGCTTTGGACTCAGGGAACCCACTaGTTGGGGAAAAGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: PPGHGHRPAHSAAPQALWTQGTH*LGKSWA
Trigger: AGCCCAGCTTTTCCCCAACCAGTGGGTTCCCTGAGT...CCAAAGCGCCTGTGGTGCTGCTGAGTGAGCCGGCCTGTGCCCATGCCCTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
CDS-3UTR CCA 90 bp AGGAATGAGGCTGCAGGACTGCTCTCAGCCAGCTCCAGCTGGGGCCGTGGGGTCGTCTCCAGCCCCACATaGTATCAGCCGCTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: RNEAAGLLSASSSWGRGVVSSPT*YQPLPS
Trigger: TGAGGGAAGCGGCTGATACCATGTGGGGCTGGAGAC...GACCCCACGGCCCCAGCTGGAGCTGGCTGAGAGCAGTCCTGCAGCCTCATTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000495421.1
ENST00000524776.5
ENST00000527319.1
CDS-3UTR TCA 90 bp GACCCTCAACTGCAGCCTGGGAACTGGGATTGGCCAAAGGTCCTGGGCTGCCCTGGTTTCCCACAGCTCTaGCTCAGGTGGTGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: DPQLQPGNWDWPKVLGCPGFPQL*LRWWES
Trigger: GCTCTCCCACCACCTGAGTCAGAGCTGTGGGAAACC...AGGGCAGCCCAGGACCTTTGGCCAATCCCAGTTCCCAGGCTGCAGTTGAGGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR TCA 90 bp GTCCAGGTACCGTGGGCGCAGGAGAGTAGCCAAAGCCTCCAGGGCATGGGCACACCGGGAACTAAGGAATaGGGCTGCAGGACTGCTCTC +
Preference number: 4 (lower is better)
Translates to: VQVPWAQESSQSLQGMGTPGTKE*GCRTAL
Trigger: GAGAGCAGTCCTGCAGCCTCATTCCTTAGTTCCCGG...TGTGCCCATGCCCTGGAGGCTTTGGCTACTCTCCTGCGCCCACGGTACCTGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495421.1
CDS-3UTR TCA 90 bp ACTCACAGCTTCTGTCACTGGCGTCTGACCCAGGCGGGGCTCCAGCCCTTGCCACCGGGAACTAAGGAATaGGGCTGCAGGACTGCTCTC +
Preference number: 4 (lower is better)
Translates to: THSFCHWRLTQAGLQPLPPGTKE*GCRTAL
Trigger: GAGAGCAGTCCTGCAGCCTCATTCCTTAGTTCCCGG...TGGCAAGGGCTGGAGCCCCGCCTGGGTCAGACGCCAGTGACAGAAGCTGTGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000495421.1
ENST00000524776.5
ENST00000527319.1
CDS-3UTR TCA 90 bp CTAAGGAATGAGGCTGCAGGACTGCTCTCAGCCAGCTCCAGCTGGGGCCGTGGGTTACTGGGCATGTGCTaGGCTTGTGCCAGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: LRNEAAGLLSASSSWGRGLLGMC*ACASAR
Trigger: CCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAA...CCCACGGCCCCAGCTGGAGCTGGCTGAGAGCAGTCCTGCAGCCTCATTCCTTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000527319.1
CDS-3UTR GCA 90 bp CTTGACACAGAGCTCCAAGGCCACAGAACGTTGACGAAGCACGAAGGCAACGGGGCTTGGGTGGTGGGATaGAGCGGGGACCTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: LDTELQGHRTLTKHEGNGAWVVG*SGDLPG
Trigger: CCCAGGGAGGTCCCCGCTGCATCCCACCACCCAAGC...CCCGTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTTGGAGCTCTGTGTCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
CDS-3UTR GCA 90 bp TGGACAGCAGGAGGAGAAGGGTTGACCTGGTGCCCACCCCAAGAGCAGCCGACTCGTCTCCTCCAGTCGTaGAGCCACAGCCACAGCATC +
Preference number: 4 (lower is better)
Translates to: WTAGGEGLTWCPPQEQPTRLLQS*SHSHSI
Trigger: GATGCTGTGGCTGTGGCTGCACGACTGGAGGAGACG...AGTCGGCTGCTCTTGGGGTGGGCACCAGGTCAACCCTTCTCCTCCTGCTGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR GCA 90 bp GCCAGTGCCAGGACAGGACAGAGACGGATCCTATCCTGTGAAGGGCTGCCTGCTTACACCCAGTGTGCCTaGCAGCAGCCCTACCACGCG +
Preference number: 4 (lower is better)
Translates to: ASARTGQRRILSCEGLPAYTQCA*QQPYHA
Trigger: CGCGTGGTAGGGCTGCTGGCAGGCACACTGGGTGTA...AGCAGGCAGCCCTTCACAGGATAGGATCCGTCTCTGTCCTGTCCTGGCACTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255108.8
ENST00000459879.1
ENST00000495421.1
ENST00000524776.5
CDS-3UTR GCA 90 bp GCCAGTGCCAGGACAGGACAGAGACGGATCCTATCCTGTGAAGGGCTGCCTGCTCCGCAAGTGGGCCAGTaGCTCACGGTGTTGGGCTAC +
Preference number: 4 (lower is better)
Translates to: ASARTGQRRILSCEGLPAPQVGQ*LTVLGY
Trigger: GTAGCCCAACACCGTGAGGCACTGGCCCACTTGCGG...AGCAGGCAGCCCTTCACAGGATAGGATCCGTCTCTGTCCTGTCCTGGCACTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255108.8
ENST00000459879.1
ENST00000495421.1
ENST00000524776.5
CDS-3UTR GCA 90 bp TTAGCCGTCCAGCCCGGGCACCCTCATCCTGAGTCTTCCCTGTATCTGGACAGCCCGCAAGTGGGCCAGTaGCTCACGGTGTTGGGCTAC +
Preference number: 4 (lower is better)
Translates to: LAVQPGHPHPESSLYLDSPQVGQ*LTVLGY
Trigger: GTAGCCCAACACCGTGAGGCACTGGCCCACTTGCGG...GCTGTCCAGATACAGGGAAGACTCAGGATGAGGGTGCCCGGGCTGGACGGCTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR GCA 90 bp GTGTTGGGCTACACCCAGTGTGCCTGCCAGCAGCCCTACCACGCGGGCATCTCTATGAGGCTGCAGGACTaGTCTCAGCCAGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: VLGYTQCACQQPYHAGISMRLQD*SQPAPA
Trigger: AGCTGGAGCTGGCTGAGAGCAGTCCTGCAGCCTCAT...AGAGATGCCCGCGTGGTAGGGCTGCTGGCAGGCACACTGGGTGTAGCCCAACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR GCA 90 bp CCTGGTGCCCACCCCAAGAGCAGCCGACTCAGGTCTGGGTCAAGGTCTGGGTCACCAAAGGTCCTGGGCTaGCCTCAGGAAGACAGATGG +
Preference number: 4 (lower is better)
Translates to: PGAHPKSSRLRSGSRSGSPKVLG*PQEDRW
Trigger: CCATCTGTCTTCCTGAGGGCAGCCCAGGACCTTTGG...TGACCCAGACCTTGACCCAGACCTGAGTCGGCTGCTCTTGGGGTGGGCACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495421.1
CDS-3UTR CCA 90 bp GACCCTCAACTGCAGCCTGGGAACTGGGATTGGCCAAAGGTCCTGGGCTGCCCTAGGAGTAAGCAGTCCTaGCACCCCGGTCTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: DPQLQPGNWDWPKVLGCPRSKQS*HPGLSL
Trigger: CAGCGAGAGACCGGGGTGCCAGGACTGCTTACTCCT...AGGGCAGCCCAGGACCTTTGGCCAATCCCAGTTCCCAGGCTGCAGTTGAGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CCA 90 bp GAGACTAGCAGGTCCAGGTACCGTGGGCGCAGGAGAGTAGCCAAAGCCTCCAGGAGGAGTAAGCAGTCCTaGCACCCCGGTCTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: ETSRSRYRGRRRVAKASRRSKQS*HPGLSL
Trigger: CAGCGAGAGACCGGGGTGCCAGGACTGCTTACTCCT...CCTGGAGGCTTTGGCTACTCTCCTGCGCCCACGGTACCTGGACCTGCTAGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
CDS-3UTR CCA 90 bp CGTCTGGGGTTTCCCACAGCTCTGACTCAGGTGGTGGGAGAGCCACGTGGAAGGCAGGTCCAGGTACCGTaGGCGCAGGAGAGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: RLGFPTALTQVVGEPRGRQVQVP*AQESSQ
Trigger: TTGGCTACTCTCCTGCGCCCACGGTACCTGGACCTG...CCTTCCACGTGGCTCTCCCACCACCTGAGTCAGAGCTGTGGGAAACCCCAGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CCA 90 bp CCTGGTGCCCACCCCAAGAGCAGCCGACTCAGGTCTGGGTCAAGGTCTGGGTCAGGGGAAAAGCTGGGCTaGAGACTAGCAGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: PGAHPKSSRLRSGSRSGSGEKLG*RLAGPG
Trigger: ACCTGGACCTGCTAGTCTCCAGCCCAGCTTTTCCCC...TGACCCAGACCTTGACCCAGACCTGAGTCGGCTGCTCTTGGGGTGGGCACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CCA 90 bp CCGCCCCAGGGCCAACACATAGCTACGCTTGCCAGCAGCCTGAGTCAGGTTCCGAGGGAACCCACTGGTTaGGGAAAAGCTGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PPQGQHIATLASSLSQVPREPTG*GKAGLE
Trigger: CTCCAGCCCAGCTTTTCCCCAACCAGTGGGTTCCCT...CGGAACCTGACTCAGGCTGCTGGCAAGCGTAGCTATGTGTTGGCCCTGGGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CCA 90 bp CTAAGGAATGAGGCTGCAGGACTGCTCTCAGCCAGCTCCAGCTGGGGCCGTGGGAGTGCCTCACGGTGTTaGGCTACACCCAGTGTGCCT +
Preference number: 4 (lower is better)
Translates to: LRNEAAGLLSASSSWGRGSASRC*ATPSVP
Trigger: AGGCACACTGGGTGTAGCCCAACACCGTGAGGCACT...CCCACGGCCCCAGCTGGAGCTGGCTGAGAGCAGTCCTGCAGCCTCATTCCTTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CCA 90 bp CACAGAGCTCCAAGGCCACAGAACGTTGACGAAGCACGAAGGCAACGGGCAGTGGGAAGTTGGCAAGCTTaGCAGGGGTGGGCCGCCCCA +
Preference number: 4 (lower is better)
Translates to: HRAPRPQNVDEARRQRAVGSWQA*QGWAAP
Trigger: TGGGGCGGCCCACCCCTGCCAAGCTTGCCAACTTCC...CACTGCCCGTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTTGGAGCTCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495421.1
CDS-3UTR CCA 90 bp CTCGTCTTCCACTCACAGCTTCTGTCACTGGCGTCTGACCCAGGCGGGGCTCCAGGTGGGAGAGCCACGTaGAAGGGAGAGCCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: LVFHSQLLSLASDPGGAPGGRAT*KGEPGN
Trigger: ATTGCCTGGCTCTCCCTTCCACGTGGCTCTCCCACC...TGGAGCCCCGCCTGGGTCAGACGCCAGTGACAGAAGCTGTGAGTGGAAGACGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CCA 90 bp AAGGACAGACCCTCAACTGCAGCCTGGGAACTGGGATTGGCCAAAGGTCCTGGGCTCCAGCTGGGGCCGTaGGGTCAGAGCCAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: KDRPSTAAWELGLAKGPGLQLGP*GQSQAS
Trigger: GGAAGCTTGGCTCTGACCCCACGGCCCCAGCTGGAG...CCCAGGACCTTTGGCCAATCCCAGTTCCCAGGCTGCAGTTGAGGGTCTGTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CCA 90 bp GGACAGACCCTCAACTGCAGCCTGGGAACTGGGATTGGCCAAAGGTCCTGGGCTCACAGCTTCTGTCACTaGCGTCTGACCCAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: GQTLNCSLGTGIGQRSWAHSFCH*RLTQAG
Trigger: CCCCGCCTGGGTCAGACGCCAGTGACAGAAGCTGTG...AGCCCAGGACCTTTGGCCAATCCCAGTTCCCAGGCTGCAGTTGAGGGTCTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR TCA 90 bp AGAGCTCCAAGGCCACAGAACGTTGACGAAGCACGAAGGCAACGGGCAGTGGGCTCGGCCTTCAGCCGGTaGGTATCCCCTTCAGCCATC +
Preference number: 4 (lower is better)
Translates to: RAPRPQNVDEARRQRAVGSAFSR*VSPSAI
Trigger: GATGGCTGAAGGGGATACTCACCGGCTGAAGGCCGA...GCCCACTGCCCGTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTTGGAGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476260.1
ENST00000495421.1
CDS-3UTR TCA 90 bp GAACTAAGGAATGAGGCTGCAGGACTGCTCTCAGCCAGCTCCAGCTGGGGCCGTTCGGCCTTCAGCCGGTaGGTATCCCCTTCAGCCATC +
Preference number: 4 (lower is better)
Translates to: ELRNEAAGLLSASSSWGRSAFSR*VSPSAI
Trigger: GATGGCTGAAGGGGATACTCACCGGCTGAAGGCCGA...ACGGCCCCAGCTGGAGCTGGCTGAGAGCAGTCCTGCAGCCTCATTCCTTAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR TCA 90 bp GCCTCACGGTGTTGGGCTACACCCAGTGTGCCTGCCAGCAGCCCTACCACGCGGCTGTGTCACCCAGAATaGACATCTTTGACCCTGTCG +
Preference number: 4 (lower is better)
Translates to: ASRCWATPSVPASSPTTRLCHPE*TSLTLS
Trigger: CGACAGGGTCAAAGATGTTCATTCTGGGTGACACAG...CCGCGTGGTAGGGCTGCTGGCAGGCACACTGGGTGTAGCCCAACACCGTGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR TCA 90 bp GCTCCAAGGCCACAGAACGTTGACGAAGCACGAAGGCAACGGGCAGTGGGCGGGAAGGCCACAGAACGTTaGCGAAGCACGAAGGCAACG +
Preference number: 4 (lower is better)
Translates to: APRPQNVDEARRQRAVGGKATER*RSTKAT
Trigger: CGTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTT...CCCGCCCACTGCCCGTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTTGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
ENST00000532140.1
CDS-3UTR TCA 90 bp CCGCCCCAGGGCCAACACATAGCTACGCTTGCCAGCAGCCTGAGTCAGGTTCCGAAGGCCACAGAACGTTaGCGAAGCACGAAGGCAACG +
Preference number: 4 (lower is better)
Translates to: PPQGQHIATLASSLSQVPKATER*RSTKAT
Trigger: CGTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTT...CGGAACCTGACTCAGGCTGCTGGCAAGCGTAGCTATGTGTTGGCCCTGGGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495421.1
CDS-3UTR TCA 90 bp CTCCAAGGCCACAGAACGTTGACGAAGCACGAAGGCAACGGGCAGTGGGCGGGCAAGGCCACAGAACGTTaGCGAAGCACGAAGGCAACG +
Preference number: 4 (lower is better)
Translates to: LQGHRTLTKHEGNGQWAGKATER*RSTKAT
Trigger: CGTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTT...GCCCGCCCACTGCCCGTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
ENST00000532140.1
CDS-3UTR TCA 90 bp GGAAAAGCTGGGCTGGAGACTAGCAGGTCCAGGTACCGTGGGCGCAGGAGAGTAGGGCCTCAAAGGCCTTaGCACAGAGCTCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: GKAGLETSRSRYRGRRRVGPQRP*HRAPRP
Trigger: TGGCCTTGGAGCTCTGTGTCAAGGCCTTTGAGGCCC...TACTCTCCTGCGCCCACGGTACCTGGACCTGCTAGTCTCCAGCCCAGCTTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
CDS-3UTR TCA 90 bp GGGCATGTGCTGAGCTTGTGCCAGTGCCAGGACAGGACAGAGACGGATCCTATCCGCTTGCCAGCAGCCTaGGTCAGGTTCCGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: GHVLSLCQCQDRTETDPIRLPAA*VRFRKW
Trigger: CCACTTGCGGAACCTGACTCAGGCTGCTGGCAAGCG...GATAGGATCCGTCTCTGTCCTGTCCTGGCACTGGCACAAGCTCAGCACATGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000459879.1
ENST00000495421.1
CDS-3UTR TCA 90 bp GGACAGACCCTCAACTGCAGCCTGGGAACTGGGATTGGCCAAAGGTCCTGGGCTAGTCCGCATAATGTGTaGGGTGGGGAGCCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: GQTLNCSLGTGIGQRSWASPHNV*GGEPGL
Trigger: CAGGCCTGGCTCCCCACCTCACACATTATGCGGACT...AGCCCAGGACCTTTGGCCAATCCCAGTTCCCAGGCTGCAGTTGAGGGTCTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255108.8
ENST00000495421.1
CDS-3UTR TCA 90 bp CGTCTGGGGTTTCCCACAGCTCTGACTCAGGTGGTGGGAGAGCCACGTGGAAGGCCGGGAACTAAGGAATaGGGCTGCAGGACTGCTCTC +
Preference number: 4 (lower is better)
Translates to: RLGFPTALTQVVGEPRGRPGTKE*GCRTAL
Trigger: GAGAGCAGTCCTGCAGCCTCATTCCTTAGTTCCCGG...CCTTCCACGTGGCTCTCCCACCACCTGAGTCAGAGCTGTGGGAAACCCCAGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR TCA 90 bp TGGACAGCAGGAGGAGAAGGGTTGACCTGGTGCCCACCCCAAGAGCAGCCGACTTTACTGGGCATGTGCTaGGCTTGTGCCAGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: WTAGGEGLTWCPPQEQPTLLGMC*ACASAR
Trigger: CCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAA...AGTCGGCTGCTCTTGGGGTGGGCACCAGGTCAACCCTTCTCCTCCTGCTGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495421.1
CDS-3UTR GCA 90 bp AGGACAGACCCTCAACTGCAGCCTGGGAACTGGGATTGGCCAAAGGTCCTGGGCCGTCTCCTCCAGTCGTaGAGCCACAGCCACAGCATC +
Preference number: 4 (lower is better)
Translates to: RTDPQLQPGNWDWPKVLGRLLQS*SHSHSI
Trigger: GATGCTGTGGCTGTGGCTGCACGACTGGAGGAGACG...GCCCAGGACCTTTGGCCAATCCCAGTTCCCAGGCTGCAGTTGAGGGTCTGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR GCA 90 bp ACGAAGGCAACGGGCAGTGGGCGGGCTGGAGGGCTTAAGCAGGCAGGGCCAAAACTTCTGGAGGCGAGTTaGTGTCATCACTGCCGTAGG +
Preference number: 4 (lower is better)
Translates to: TKATGSGRAGGLKQAGPKLLEAS*CHHCRR
Trigger: CCTACGGCAGTGATGACAGCAACTCGCCTCCAGAAG...TTTTGGCCCTGCCTGCTTAAGCCCTCCAGCCCGCCCACTGCCCGTTGCCTTCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492306.5
CDS-3UTR GCA 90 bp GCTGGGCTGGAGACTAGCAGGTCCAGGTACCGTGGGCGCAGGAGAGTAGCCAAAGGCCAAGTTCACACCTaGCGTAGGCTGTGTCACCCA +
Preference number: 4 (lower is better)
Translates to: AGLETSRSRYRGRRRVAKGQVHT*RRLCHP
Trigger: TGGGTGACACAGCCTACGGCAGGTGTGAACTTGGCC...TTTGGCTACTCTCCTGCGCCCACGGTACCTGGACCTGCTAGTCTCCAGCCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476260.1
CDS-3UTR CCA 90 bp GTCCAGGTACCGTGGGCGCAGGAGAGTAGCCAAAGCCTCCAGGGCATGGGCACATTGGGGTCTGGGTTCTaGGCCTCAAAGGCCTTGACA +
Preference number: 4 (lower is better)
Translates to: VQVPWAQESSQSLQGMGTLGSGF*ASKALT
Trigger: TGTCAAGGCCTTTGAGGCCCAGAACCCAGACCCCAA...TGTGCCCATGCCCTGGAGGCTTTGGCTACTCTCCTGCGCCCACGGTACCTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
CDS-3UTR CCA 90 bp GGAAAAGCTGGGCTGGAGACTAGCAGGTCCAGGTACCGTGGGCGCAGGAGAGTAAGGCGCTTTGGGGTCTaGGTTCTGGGCCTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: GKAGLETSRSRYRGRRRVRRFGV*VLGLKG
Trigger: GCCTTTGAGGCCCAGAACCCAGACCCCAAAGCGCCT...TACTCTCCTGCGCCCACGGTACCTGGACCTGCTAGTCTCCAGCCCAGCTTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
CDS-3UTR CCA 90 bp TCTGGGGTTTCCCACAGCTCTGACTCAGGTGGTGGGAGAGCCACGTGGAAGGGAAGGCGCTTTGGGGTCTaGGTTCTGGGCCTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: SGVSHSSDSGGGRATWKGRRFGV*VLGLKG
Trigger: GCCTTTGAGGCCCAGAACCCAGACCCCAAAGCGCCT...TCCCTTCCACGTGGCTCTCCCACCACCTGAGTCAGAGCTGTGGGAAACCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495421.1
CDS-3UTR CCA 90 bp CTCCAGCTTGCTCAGCACCCAGCACATCCACGCAGCAGCTGCAGGGAAGATAGCCAGGTCCAGGTACCGTaGGCGCAGGAGAGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: LQLAQHPAHPRSSCREDSQVQVP*AQESSQ
Trigger: TTGGCTACTCTCCTGCGCCCACGGTACCTGGACCTG...GCTATCTTCCCTGCAGCTGCTGCGTGGATGTGCTGGGTGCTGAGCAAGCTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492306.5
CDS-3UTR CCA 90 bp GTGCCAGTGCCAGGACAGGACAGAGACGGATCCTATCCTGTGAAGGGCTGCCTGGTCAGGTTCCGCAAGTaGGCCAGTGCCTCACGGTGT +
Preference number: 4 (lower is better)
Translates to: VPVPGQDRDGSYPVKGCLVRFRK*ASASRC
Trigger: ACACCGTGAGGCACTGGCCCACTTGCGGAACCTGAC...CAGGCAGCCCTTCACAGGATAGGATCCGTCTCTGTCCTGTCCTGGCACTGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255108.8
ENST00000459879.1
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CCA 90 bp AGAGCTCCAAGGCCACAGAACGTTGACGAAGCACGAAGGCAACGGGCAGTGGGCGGTGGGAGAGCCACGTaGAAGGGAGAGCCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: RAPRPQNVDEARRQRAVGGGRAT*KGEPGN
Trigger: ATTGCCTGGCTCTCCCTTCCACGTGGCTCTCCCACC...GCCCACTGCCCGTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTTGGAGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495421.1
CDS-3UTR CCA 90 bp GGGGATGGGAGGTTGGTGCAGGGAGCACTAAAGGTCCTAGCAGCCATTCATAAGTCAGCCAGCTCCAGCTaGGGCCGTGGGGTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: GDGRLVQGALKVLAAIHKSASSS*GRGVRA
Trigger: GGCTCTGACCCCACGGCCCCAGCTGGAGCTGGCTGA...CTTATGAATGGCTGCTAGGACCTTTAGTGCTCCCTGCACCAACCTCCCATCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000524776.5
ENST00000527319.1
CDS-3UTR CCA 90 bp AGTGCCAGGACAGGACAGAGACGGATCCTATCCTGTGAAGGGCTGCCTGCTCTCCACAGCTTCTGTCACTaGCGTCTGACCCAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: SARTGQRRILSCEGLPALHSFCH*RLTQAG
Trigger: CCCCGCCTGGGTCAGACGCCAGTGACAGAAGCTGTG...GAGAGCAGGCAGCCCTTCACAGGATAGGATCCGTCTCTGTCCTGTCCTGGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000524776.5
ENST00000527319.1
CDS-3UTR CCA 90 bp CCAACACATAGCTACGCTTGCCAGCAGCCTGAGTCAGGTTCCGCAAGTGGGCCACACAGCTTCTGTCACTaGCGTCTGACCCAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: PTHSYACQQPESGSASGPHSFCH*RLTQAG
Trigger: CCCCGCCTGGGTCAGACGCCAGTGACAGAAGCTGTG...TGGCCCACTTGCGGAACCTGACTCAGGCTGCTGGCAAGCGTAGCTATGTGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CCA 90 bp CTTGCCAGCAGCCTGAGTCAGGTTCCGCAAGTGGGCCAGTGCCTCACGGTGTTGGTCTCCAGCCCCACATaGTATCAGCCGCTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: LASSLSQVPQVGQCLTVLVSSPT*YQPLPS
Trigger: TGAGGGAAGCGGCTGATACCATGTGGGGCTGGAGAC...CAACACCGTGAGGCACTGGCCCACTTGCGGAACCTGACTCAGGCTGCTGGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CCA 90 bp GGACAGACCCTCAACTGCAGCCTGGGAACTGGGATTGGCCAAAGGTCCTGGGCTCCTGGGAACTGGGATTaGCCAAAGGTCCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GQTLNCSLGTGIGQRSWAPGNWD*PKVLGC
Trigger: GCAGCCCAGGACCTTTGGCCAATCCCAGTTCCCAGG...AGCCCAGGACCTTTGGCCAATCCCAGTTCCCAGGCTGCAGTTGAGGGTCTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
3UTR CAA 72 bp AAAGGCCTTGACACAGAGCTCCAAGGCCACAGAACGTaGACGAAGCACGAAGGCAACGGGCAGTGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: KGLDTELQGHRT*TKHEGNGQWAG
Trigger: GCCCGCCCACTGCCCGTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTTGGAGCTCTGTGTCAAGGCCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
3UTR CAA 72 bp GGCAGGGCCAAAATGTATGAGAGCCTGAGCTCCAGCTaGCTCAGCACCCAGCACATCCACGCAGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: GRAKMYESLSSS*LSTQHIHAAAA
Trigger: GGCAGCTGCTGCGTGGATGTGCTGGGTGCTGAGCAAGCTGGAGCTCAGGCTCTCATACATTTTGGCCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532140.1
CDS-3UTR TCA 90 bp GATGGCAATCCCTCGTCTTCCACTCACAGCTTCTGTCACTGGCGTCTGACCCAGCGCTTGCCAGCAGCCTaGGTCAGGTTCCGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: DGNPSSSTHSFCHWRLTQRLPAA*VRFRKW
Trigger: CCACTTGCGGAACCTGACTCAGGCTGCTGGCAAGCG...CTGGGTCAGACGCCAGTGACAGAAGCTGTGAGTGGAAGACGAGGGATTGCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR TCA 90 bp GTGCCAGTGCCAGGACAGGACAGAGACGGATCCTATCCTGTGAAGGGCTGCCTGTTACTGGGCATGTGCTaGGCTTGTGCCAGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: VPVPGQDRDGSYPVKGCLLLGMC*ACASAR
Trigger: CCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAA...CAGGCAGCCCTTCACAGGATAGGATCCGTCTCTGTCCTGTCCTGGCACTGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000527319.1
CDS-3UTR TCA 90 bp CCTGGTGCCCACCCCAAGAGCAGCCGACTCAGGTCTGGGTCAAGGTCTGGGTCACTAGCACCTGCCTTTTaGCAAGGACAGACCCTCAAC +
Preference number: 4 (lower is better)
Translates to: PGAHPKSSRLRSGSRSGSLAPAF*QGQTLN
Trigger: GTTGAGGGTCTGTCCTTGTCAAAAGGCAGGTGCTAG...TGACCCAGACCTTGACCCAGACCTGAGTCGGCTGCTCTTGGGGTGGGCACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495421.1
CDS-3UTR GCA 90 bp GCTGAGCACCCTACCATACACCAGACAGCCCCACAACAAAGAATTATCTGGCCCGCTTGGGTGGTGGGATaGAGCGGGGACCTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: AEHPTIHQTAPQQRIIWPAWVVG*SGDLPG
Trigger: CCCAGGGAGGTCCCCGCTGCATCCCACCACCCAAGC...GGGCCAGATAATTCTTTGTTGTGGGGCTGTCTGGTGTATGGTAGGGTGCTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR GCA 90 bp AAAATGTATGAGAGCCTGAGCTCCAGCTTGCTCAGCACCCAGCACATCCACGCAGCTTGGGTGGTGGGATaGAGCGGGGACCTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: KMYESLSSSLLSTQHIHAAWVVG*SGDLPG
Trigger: CCCAGGGAGGTCCCCGCTGCATCCCACCACCCAAGC...TGCGTGGATGTGCTGGGTGCTGAGCAAGCTGGAGCTCAGGCTCTCATACATTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000532140.1
CDS-3UTR GCA 90 bp GCTCCAAGGCCACAGAACGTTGACGAAGCACGAAGGCAACGGGCAGTGGGCGGGAGCTGGTCAGGGAACTaGAAGGCAACTCGTTCACAC +
Preference number: 4 (lower is better)
Translates to: APRPQNVDEARRQRAVGGSWSGN*KATRSH
Trigger: GTGTGAACGAGTTGCCTTGCAGTTCCCTGACCAGCT...CCCGCCCACTGCCCGTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTTGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492306.5
CDS-3UTR GCA 90 bp ACACGCATTACTGGGCATGTGCTGAGCTTGTGCCAGTGCCAGGACAGGACAGAGGGGCTACACCCAGTGTaGCTGCCAGCAGCCCTACCA +
Preference number: 4 (lower is better)
Translates to: TRITGHVLSLCQCQDRTEGLHPV*LPAALP
Trigger: TGGTAGGGCTGCTGGCAGGCACACTGGGTGTAGCCC...CTCTGTCCTGTCCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAATGCGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000459879.1
ENST00000495421.1
CDS-3UTR GCA 90 bp CATTACTGGGCATGTGCTGAGCTTGTGCCAGTGCCAGGACAGGACAGAGACGGACCGCAAGTGGGCCAGTaGCTCACGGTGTTGGGCTAC +
Preference number: 4 (lower is better)
Translates to: HYWACAELVPVPGQDRDGPQVGQ*LTVLGY
Trigger: GTAGCCCAACACCGTGAGGCACTGGCCCACTTGCGG...TCCGTCTCTGTCCTGTCCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000459879.1
ENST00000495421.1
CDS-3UTR GCA 90 bp GATGACTTCCAGGCAGGTGGGGGTCGGAGATCTCCAGTAATGAGTGACACGTCTCGGGGCTCCAGCCCTTaGCAGCTCCGGGAACTAAGG +
Preference number: 4 (lower is better)
Translates to: DDFQAGGGRRSPVMSDTSRGSSP*QLRELR
Trigger: CCTTAGTTCCCGGAGCTGGCAAGGGCTGGAGCCCCG...AGACGTGTCACTCATTACTGGAGATCTCCGACCCCCACCTGCCTGGAAGTCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000495421.1
ENST00000524776.5
ENST00000527319.1
CDS-3UTR GCA 90 bp TCTGGGGTTTCCCACAGCTCTGACTCAGGTGGTGGGAGAGCCACGTGGAAGGGACTGAGCTTGTGCCAGTaGCAGGACAGGACAGAGACG +
Preference number: 4 (lower is better)
Translates to: SGVSHSSDSGGGRATWKGLSLCQ*QDRTET
Trigger: CGTCTCTGTCCTGTCCTGGCACTGGCACAAGCTCAG...TCCCTTCCACGTGGCTCTCCCACCACCTGAGTCAGAGCTGTGGGAAACCCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495421.1
CDS-3UTR CCA 90 bp GAGCTCCAGCTTGCTCAGCACCCAGCACATCCACGCAGCAGCTGCCGTAGGCTGGCATCTCCCAATAGCTaGTCAGGGAACTGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: ELQLAQHPAHPRSSCRRLASPNS*SGNCKA
Trigger: TGCCTTGCAGTTCCCTGACCAGCTATTGGGAGATGC...CAGCCTACGGCAGCTGCTGCGTGGATGTGCTGGGTGCTGAGCAAGCTGGAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532140.1
CDS-3UTR CCA 90 bp TCTGGGTTCTGGGCCTCAAAGGCCTTGACACAGAGCTCCAAGGCCACAGAACGTGCACCACAGGCGCTTTaGGGTCTGGGTTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: SGFWASKALTQSSKATERAPQAL*GLGSGP
Trigger: AGGCCCAGAACCCAGACCCCAAAGCGCCTGTGGTGC...ACGTTCTGTGGCCTTGGAGCTCTGTGTCAAGGCCTTTGAGGCCCAGAACCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
CDS-3UTR CCA 90 bp AAGGACAGACCCTCAACTGCAGCCTGGGAACTGGGATTGGCCAAAGGTCCTGGGCAGGTCCAGGTACCGTaGGCGCAGGAGAGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: KDRPSTAAWELGLAKGPGQVQVP*AQESSQ
Trigger: TTGGCTACTCTCCTGCGCCCACGGTACCTGGACCTG...CCCAGGACCTTTGGCCAATCCCAGTTCCCAGGCTGCAGTTGAGGGTCTGTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255108.8
ENST00000495421.1
CDS-3UTR CCA 90 bp CACAGAGCTCCAAGGCCACAGAACGTTGACGAAGCACGAAGGCAACGGGCAGTGCAGGTCCAGGTACCGTaGGCGCAGGAGAGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: HRAPRPQNVDEARRQRAVQVQVP*AQESSQ
Trigger: TTGGCTACTCTCCTGCGCCCACGGTACCTGGACCTG...CACTGCCCGTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTTGGAGCTCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
CDS-3UTR CCA 90 bp GGACAGACCCTCAACTGCAGCCTGGGAACTGGGATTGGCCAAAGGTCCTGGGCTAGGGAACCCACTGGTTaGGGAAAAGCTGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GQTLNCSLGTGIGQRSWAREPTG*GKAGLE
Trigger: CTCCAGCCCAGCTTTTCCCCAACCAGTGGGTTCCCT...AGCCCAGGACCTTTGGCCAATCCCAGTTCCCAGGCTGCAGTTGAGGGTCTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255108.8
ENST00000495421.1
CDS-3UTR CCA 90 bp AGCCCCCTACATAGAAGGCACCATACTCTTCTAGACGCCTCCCTGGGGCAAGGGCAGCCGACTCAGGTCTaGGTCAAGGTCTGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: SPLHRRHHTLLDASLGQGQPTQV*VKVWVR
Trigger: CCTGACCCAGACCTTGACCCAGACCTGAGTCGGCTG...CCCTTGCCCCAGGGAGGCGTCTAGAAGAGTATGGTGCCTTCTATGTAGGGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495421.1
CDS-3UTR CCA 90 bp AGTTGGCAAGCTTGGCAGGGGTGGGCCGCCCCAGGGCCAACACATAGCTACGCTAGTCTTCCCTGTATCTaGACAGCAGGAGGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: SWQAWQGWAAPGPTHSYASLPCI*TAGGEG
Trigger: CCCTTCTCCTCCTGCTGTCCAGATACAGGGAAGACT...AGCGTAGCTATGTGTTGGCCCTGGGGCGGCCCACCCCTGCCAAGCTTGCCAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CCA 90 bp GTGCCAGTGCCAGGACAGGACAGAGACGGATCCTATCCTGTGAAGGGCTGCCTGCCACGCGGGCATCTCTaGCCCTCTCTACCAGATATC +
Preference number: 4 (lower is better)
Translates to: VPVPGQDRDGSYPVKGCLPRGHL*PSLPDI
Trigger: GATATCTGGTAGAGAGGGCCAGAGATGCCCGCGTGG...CAGGCAGCCCTTCACAGGATAGGATCCGTCTCTGTCCTGTCCTGGCACTGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255108.8
ENST00000459879.1
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CCA 90 bp GGAAAAGCTGGGCTGGAGACTAGCAGGTCCAGGTACCGTGGGCGCAGGAGAGTAAGTGCCTCACGGTGTTaGGCTACACCCAGTGTGCCT +
Preference number: 4 (lower is better)
Translates to: GKAGLETSRSRYRGRRRVSASRC*ATPSVP
Trigger: AGGCACACTGGGTGTAGCCCAACACCGTGAGGCACT...TACTCTCCTGCGCCCACGGTACCTGGACCTGCTAGTCTCCAGCCCAGCTTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495421.1
CDS-3UTR CCA 90 bp AACACGCATTACTGGGCATGTGCTGAGCTTGTGCCAGTGCCAGGACAGGACAGACTCCAGCTGGGGCCGTaGGGTCAGAGCCAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: NTHYWACAELVPVPGQDRLQLGP*GQSQAS
Trigger: GGAAGCTTGGCTCTGACCCCACGGCCCCAGCTGGAG...TCTGTCCTGTCCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAATGCGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000527319.1
CDS-3UTR CCA 90 bp AGTTGGCAAGCTTGGCAGGGGTGGGCCGCCCCAGGGCCAACACATAGCTACGCTCATCCTCATAGGCGATaGCAATCCCTCGTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: SWQAWQGWAAPGPTHSYAHPHRR*QSLVFH
Trigger: GTGGAAGACGAGGGATTGCCATCGCCTATGAGGATG...AGCGTAGCTATGTGTTGGCCCTGGGGCGGCCCACCCCTGCCAAGCTTGCCAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CCA 90 bp GTGCCAGTGCCAGGACAGGACAGAGACGGATCCTATCCTGTGAAGGGCTGCCTGGTCTCCAGCCCCACATaGTATCAGCCGCTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: VPVPGQDRDGSYPVKGCLVSSPT*YQPLPS
Trigger: TGAGGGAAGCGGCTGATACCATGTGGGGCTGGAGAC...CAGGCAGCCCTTCACAGGATAGGATCCGTCTCTGTCCTGTCCTGGCACTGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000524776.5
ENST00000527319.1
CDS-3UTR CCA 90 bp CTCCAGGGCATGGGCACAGGCCGGCTCACTCAGCAGCACCACAGGCGCTTTGGGAAATGGGTTCTCTTCTaGAGGCGAGTTGCTGTCATC +
Preference number: 4 (lower is better)
Translates to: LQGMGTGRLTQQHHRRFGKWVLF*RRVAVI
Trigger: GATGACAGCAACTCGCCTCCAGAAGAGAACCCATTT...CCCAAAGCGCCTGTGGTGCTGCTGAGTGAGCCGGCCTGTGCCCATGCCCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492306.5
3UTR CAA 72 bp AAGGACAGACCCTCAACTGCAGCCTGGGAACTGGGATaGGCCAAAGGTCCTGGGCTGCCCTCAGGAAGACAG +
Preference number: 4 (lower is better)
Translates to: KDRPSTAAWELG*AKGPGLPSGRQ
Trigger: CTGTCTTCCTGAGGGCAGCCCAGGACCTTTGGCCAATCCCAGTTCCCAGGCTGCAGTTGAGGGTCTGTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
3UTR CAA 72 bp GGCAGGGCCAAAATGTATGAGAGCCTGAGCTCCAGCTaGCTCAGCACCCAGCACATCCACGCAGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: GRAKMYESLSSS*LSTQHIHAAAA
Trigger: TGCAGCTGCTGCGTGGATGTGCTGGGTGCTGAGCAAGCTGGAGCTCAGGCTCTCATACATTTTGGCCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492306.5
CDS-3UTR TCA 90 bp GAGCTCCAGCTTGCTCAGCACCCAGCACATCCACGCAGCAGCTGCCGTAGGCTGAAATGTATGAGAGCCTaGGCTCCAGCTTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: ELQLAQHPAHPRSSCRRLKCMRA*APACSA
Trigger: TGCTGAGCAAGCTGGAGCTCAGGCTCTCATACATTT...CAGCCTACGGCAGCTGCTGCGTGGATGTGCTGGGTGCTGAGCAAGCTGGAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532140.1
CDS-3UTR TCA 90 bp GCCAGTGCCAGGACAGGACAGAGACGGATCCTATCCTGTGAAGGGCTGCCTGCTAAGGCCACAGAACGTTaGCGAAGCACGAAGGCAACG +
Preference number: 4 (lower is better)
Translates to: ASARTGQRRILSCEGLPAKATER*RSTKAT
Trigger: CGTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTT...AGCAGGCAGCCCTTCACAGGATAGGATCCGTCTCTGTCCTGTCCTGGCACTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR TCA 90 bp TCAGCCGCTTCCCTCATCCTCATAGGCGATGGCAATCCCTCGTCTTCCACTCACGGGCCTCAAAGGCCTTaGCACAGAGCTCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: SAASLILIGDGNPSSSTHGPQRP*HRAPRP
Trigger: TGGCCTTGGAGCTCTGTGTCAAGGCCTTTGAGGCCC...GTGAGTGGAAGACGAGGGATTGCCATCGCCTATGAGGATGAGGGAAGCGGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495421.1
CDS-3UTR TCA 90 bp GTTGTCACAACTGGGGGAGTGCTTCTGATGTCTAGTGGGCAGAGGCCAGGGATGGGTTTCCCACAGCTCTaGCTCAGGTGGTGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: VVTTGGVLLMSSGQRPGMGFPQL*LRWWES
Trigger: GCTCTCCCACCACCTGAGTCAGAGCTGTGGGAAACC...CATCCCTGGCCTCTGCCCACTAGACATCAGAAGCACTCCCCCAGTTGTGACAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR TCA 90 bp TGTGCTGAGCTTGTGCCAGTGCCAGGACAGGACAGAGACGGATCCTATCCTGTGACGGATCCTATCCTGTaGAGGGCTGCCTGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: CAELVPVPGQDRDGSYPVTDPIL*RAACSP
Trigger: GGGAGAGCAGGCAGCCCTTCACAGGATAGGATCCGT...CACAGGATAGGATCCGTCTCTGTCCTGTCCTGGCACTGGCACAAGCTCAGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000527319.1
CDS-3UTR TCA 90 bp AGTGCCAGGACAGGACAGAGACGGATCCTATCCTGTGAAGGGCTGCCTGCTCTCTTACTGGGCATGTGCTaGGCTTGTGCCAGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: SARTGQRRILSCEGLPALLLGMC*ACASAR
Trigger: CCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAA...GAGAGCAGGCAGCCCTTCACAGGATAGGATCCGTCTCTGTCCTGTCCTGGCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000527319.1
CDS-3UTR GCA 90 bp GTCCAACCAATAGAACTTTCTGCCATGATGGCATATCCTGTAGCTGCACTGTCCACCCCGGTCTCTCGCTaGAGCGCCGCCTCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: VQPIELSAMMAYPVAALSTPVSR*SAASAG
Trigger: CCCTGCCGAGGCGGCGCTGCAGCGAGAGACCGGGGT...GGACAGTGCAGCTACAGGATATGCCATCATGGCAGAAAGTTCTATTGGTTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR GCA 90 bp TTGGTGCAGGGAGCACTAAAGGTCCTAGCAGCCATTCATAAGTCCATCTATGTCACCCCGGTCTCTCGCTaGAGCGCCGCCTCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LVQGALKVLAAIHKSIYVTPVSR*SAASAG
Trigger: CCCTGCCGAGGCGGCGCTGCAGCGAGAGACCGGGGT...GACATAGATGGACTTATGAATGGCTGCTAGGACCTTTAGTGCTCCCTGCACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
ENST00000524776.5
CDS-3UTR GCA 90 bp GAGACTAGCAGGTCCAGGTACCGTGGGCGCAGGAGAGTAGCCAAAGCCTCCAGGCATCCACGCAGCAGCTaGAGGGAAGATAGCATCAGA +
Preference number: 4 (lower is better)
Translates to: ETSRSRYRGRRRVAKASRHPRSS*REDSIR
Trigger: TCTGATGCTATCTTCCCTGCAGCTGCTGCGTGGATG...CCTGGAGGCTTTGGCTACTCTCCTGCGCCCACGGTACCTGGACCTGCTAGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492306.5
CDS-3UTR CCA 90 bp GGAAGACAGATGGGTCCAGAGGCCTCAGGGAAGTCCCTAAGCCCTTTATTCCATGCACAGCTTGGGTGGTaGGATGCAGCGGGGACCTCC +
Preference number: 4 (lower is better)
Translates to: GRQMGPEASGKSLSPLFHAQLGW*DAAGTS
Trigger: GGAGGTCCCCGCTGCATCCCACCACCCAAGCTGTGC...ATGGAATAAAGGGCTTAGGGACTTCCCTGAGGCCTCTGGACCCATCTGTCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CCA 90 bp AAAATGTATGAGAGCCTGAGCTCCAGCTTGCTCAGCACCCAGCACATCCACGCAGCACAGCTTGGGTGGTaGGATGCAGCGGGGACCTCC +
Preference number: 4 (lower is better)
Translates to: KMYESLSSSLLSTQHIHAAQLGW*DAAGTS
Trigger: GGAGGTCCCCGCTGCATCCCACCACCCAAGCTGTGC...TGCGTGGATGTGCTGGGTGCTGAGCAAGCTGGAGCTCAGGCTCTCATACATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000532140.1
CDS-3UTR CCA 90 bp CATCAGCCAAACAACACGCATTACTGGGCATGTGCTGAGCTTGTGCCAGTGCCAGAGGCACAGCTTGGGTaGTGGGATGCAGCGGGGACC +
Preference number: 4 (lower is better)
Translates to: HQPNNTHYWACAELVPVPEAQLG*WDAAGT
Trigger: GGTCCCCGCTGCATCCCACCACCCAAGCTGTGCCTC...TGGCACTGGCACAAGCTCAGCACATGCCCAGTAATGCGTGTTGTTTGGCTGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CCA 90 bp GTTGTCACAACTGGGGGAGTGCTTCTGATGTCTAGTGGGCAGAGGCCAGGGATGAGGAGTAAGCAGTCCTaGCACCCCGGTCTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: VVTTGGVLLMSSGQRPGMRSKQS*HPGLSL
Trigger: CAGCGAGAGACCGGGGTGCCAGGACTGCTTACTCCT...CATCCCTGGCCTCTGCCCACTAGACATCAGAAGCACTCCCCCAGTTGTGACAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CCA 90 bp CCAAACAACACGCATTACTGGGCATGTGCTGAGCTTGTGCCAGTGCCAGGACAGGCACCACAGGCGCTTTaGGGTCTGGGTTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: PNNTHYWACAELVPVPGQAPQAL*GLGSGP
Trigger: AGGCCCAGAACCCAGACCCCAAAGCGCCTGTGGTGC...CTGTCCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAATGCGTGTTGTTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
CDS-3UTR CCA 90 bp ACAGAGCTCCAAGGCCACAGAACGTTGACGAAGCACGAAGGCAACGGGCAGTGGAGGGAACCCACTGGTTaGGGAAAAGCTGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: TELQGHRTLTKHEGNGQWREPTG*GKAGLE
Trigger: CTCCAGCCCAGCTTTTCCCCAACCAGTGGGTTCCCT...CCACTGCCCGTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTTGGAGCTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
CDS-3UTR CCA 90 bp CACAGAGCTCCAAGGCCACAGAACGTTGACGAAGCACGAAGGCAACGGGCAGTGAGGGAACCCACTGGTTaGGGAAAAGCTGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: HRAPRPQNVDEARRQRAVREPTG*GKAGLE
Trigger: CTCCAGCCCAGCTTTTCCCCAACCAGTGGGTTCCCT...CACTGCCCGTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTTGGAGCTCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
CDS-3UTR CCA 90 bp AGTGCCAGGACAGGACAGAGACGGATCCTATCCTGTGAAGGGCTGCCTGCTCTCAGGGAACCCACTGGTTaGGGAAAAGCTGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SARTGQRRILSCEGLPALREPTG*GKAGLE
Trigger: CTCCAGCCCAGCTTTTCCCCAACCAGTGGGTTCCCT...GAGAGCAGGCAGCCCTTCACAGGATAGGATCCGTCTCTGTCCTGTCCTGGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CCA 90 bp GAACTAAGGAATGAGGCTGCAGGACTGCTCTCAGCCAGCTCCAGCTGGGGCCGTACTCAGGGAACCCACTaGTTGGGGAAAAGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: ELRNEAAGLLSASSSWGRTQGTH*LGKSWA
Trigger: AGCCCAGCTTTTCCCCAACCAGTGGGTTCCCTGAGT...ACGGCCCCAGCTGGAGCTGGCTGAGAGCAGTCCTGCAGCCTCATTCCTTAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CCA 90 bp GCTGAGCTTGTGCCAGTGCCAGGACAGGACAGAGACGGATCCTATCCTGTGAAGGGAGAAGGGTTGACCTaGTGCCCACCCCAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: AELVPVPGQDRDGSYPVKGEGLT*CPPQEQ
Trigger: CTGCTCTTGGGGTGGGCACCAGGTCAACCCTTCTCC...CTTCACAGGATAGGATCCGTCTCTGTCCTGTCCTGGCACTGGCACAAGCTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255108.8
ENST00000495421.1
CDS-3UTR CCA 90 bp TCCCTCATCCTCATAGGCGATGGCAATCCCTCGTCTTCCACTCACAGCTTCTGTGGAAGTTGGCAAGCTTaGCAGGGGTGGGCCGCCCCA +
Preference number: 4 (lower is better)
Translates to: SLILIGDGNPSSSTHSFCGSWQA*QGWAAP
Trigger: TGGGGCGGCCCACCCCTGCCAAGCTTGCCAACTTCC...ACAGAAGCTGTGAGTGGAAGACGAGGGATTGCCATCGCCTATGAGGATGAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CCA 90 bp TCCGCAAGTGGGCCAGTGCCTCACGGTGTTGGGCTACACCCAGTGTGCCTGCCAGGTGCCAGTATAGGCTaGAAGAAGCTACCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: SASGPVPHGVGLHPVCLPGASIG*KKLPES
Trigger: GCTTTCTGGTAGCTTCTTCCAGCCTATACTGGCACC...TGGCAGGCACACTGGGTGTAGCCCAACACCGTGAGGCACTGGCCCACTTGCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CCA 90 bp TCCGCAAGTGGGCCAGTGCCTCACGGTGTTGGGCTACACCCAGTGTGCCTGCCAAGCTTCCAGCTCACATaGTGCCAGTATAGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: SASGPVPHGVGLHPVCLPSFQLT*CQYRLE
Trigger: TTCCAGCCTATACTGGCACCATGTGAGCTGGAAGCT...TGGCAGGCACACTGGGTGTAGCCCAACACCGTGAGGCACTGGCCCACTTGCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CCA 90 bp TGTGCTGAGCTTGTGCCAGTGCCAGGACAGGACAGAGACGGATCCTATCCTGTGGGTGGGAGAGCCACGTaGAAGGGAGAGCCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: CAELVPVPGQDRDGSYPVGGRAT*KGEPGN
Trigger: ATTGCCTGGCTCTCCCTTCCACGTGGCTCTCCCACC...CACAGGATAGGATCCGTCTCTGTCCTGTCCTGGCACTGGCACAAGCTCAGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000459879.1
ENST00000495421.1
CDS-3UTR CCA 90 bp GCAGCCATTCATAAGTCCATCTATGTCTCCAGCCCCACATGGTATCAGCCGCTTTCAGCCAGCTCCAGCTaGGGCCGTGGGGTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: AAIHKSIYVSSPTWYQPLSASSS*GRGVRA
Trigger: GGCTCTGACCCCACGGCCCCAGCTGGAGCTGGCTGA...AAGCGGCTGATACCATGTGGGGCTGGAGACATAGATGGACTTATGAATGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000495421.1
ENST00000524776.5
ENST00000527319.1
CDS-3UTR CCA 90 bp CCAAACAACACGCATTACTGGGCATGTGCTGAGCTTGTGCCAGTGCCAGGACAGCACAGCTTCTGTCACTaGCGTCTGACCCAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: PNNTHYWACAELVPVPGQHSFCH*RLTQAG
Trigger: CCCCGCCTGGGTCAGACGCCAGTGACAGAAGCTGTG...CTGTCCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAATGCGTGTTGTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000527319.1
CDS-3UTR CCA 90 bp CTTGACACAGAGCTCCAAGGCCACAGAACGTTGACGAAGCACGAAGGCAACGGGCCTGGGAACTGGGATTaGCCAAAGGTCCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LDTELQGHRTLTKHEGNGPGNWD*PKVLGC
Trigger: GCAGCCCAGGACCTTTGGCCAATCCCAGTTCCCAGG...CCCGTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTTGGAGCTCTGTGTCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495421.1
CDS-3UTR CCA 90 bp GTGCCAGTGCCAGGACAGGACAGAGACGGATCCTATCCTGTGAAGGGCTGCCTGCCCTCAACTGCAGCCTaGGAACTGGGATTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: VPVPGQDRDGSYPVKGCLPSTAA*ELGLAK
Trigger: TTTGGCCAATCCCAGTTCCCAGGCTGCAGTTGAGGG...CAGGCAGCCCTTCACAGGATAGGATCCGTCTCTGTCCTGTCCTGGCACTGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CCA 90 bp GGGGATGGGAGGTTGGTGCAGGGAGCACTAAAGGTCCTAGCAGCCATTCATAAGCCTGTATCCAGGGCATaGGCACAGGCCGGCTCACTC +
Preference number: 4 (lower is better)
Translates to: GDGRLVQGALKVLAAIHKPVSRA*AQAGSL
Trigger: GAGTGAGCCGGCCTGTGCCCATGCCCTGGATACAGG...CTTATGAATGGCTGCTAGGACCTTTAGTGCTCCCTGCACCAACCTCCCATCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459879.1
CDS-3UTR CCA 90 bp CCTCCAGGGCATGGGCACAGGCCGGCTCACTCAGCAGCACCACAGGCGCTTTGGATAGCATCAGAGAAATaGGTTCTCTTCTGGAGGCGA +
Preference number: 4 (lower is better)
Translates to: PPGHGHRPAHSAAPQALWIASEK*VLFWRR
Trigger: TCGCCTCCAGAAGAGAACCCATTTCTCTGATGCTAT...CCAAAGCGCCTGTGGTGCTGCTGAGTGAGCCGGCCTGTGCCCATGCCCTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492306.5
CDS-3UTR TCA 90 bp AACACGCATTACTGGGCATGTGCTGAGCTTGTGCCAGTGCCAGGACAGGACAGATCGGCCTTCAGCCGGTaGGTATCCCCTTCAGCCATC +
Preference number: 4 (lower is better)
Translates to: NTHYWACAELVPVPGQDRSAFSR*VSPSAI
Trigger: GATGGCTGAAGGGGATACTCACCGGCTGAAGGCCGA...TCTGTCCTGTCCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAATGCGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255108.8
ENST00000495421.1
CDS-3UTR TCA 90 bp GCTGGGCTGGAGACTAGCAGGTCCAGGTACCGTGGGCGCAGGAGAGTAGCCAAACTGTGTCACCCAGAATaGACATCTTTGACCCTGTCG +
Preference number: 4 (lower is better)
Translates to: AGLETSRSRYRGRRRVAKLCHPE*TSLTLS
Trigger: CGACAGGGTCAAAGATGTTCATTCTGGGTGACACAG...TTTGGCTACTCTCCTGCGCCCACGGTACCTGGACCTGCTAGTCTCCAGCCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
CDS-3UTR TCA 90 bp GAGCTCCAAGGCCACAGAACGTTGACGAAGCACGAAGGCAACGGGCAGTGGGCGCTGTGTCACCCAGAATaGACATCTTTGACCCTGTCG +
Preference number: 4 (lower is better)
Translates to: ELQGHRTLTKHEGNGQWALCHPE*TSLTLS
Trigger: CGACAGGGTCAAAGATGTTCATTCTGGGTGACACAG...CGCCCACTGCCCGTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTTGGAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
ENST00000532140.1
CDS-3UTR TCA 90 bp GCTGGGCTGGAGACTAGCAGGTCCAGGTACCGTGGGCGCAGGAGAGTAGCCAAAAAATGTATGAGAGCCTaGGCTCCAGCTTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: AGLETSRSRYRGRRRVAKKCMRA*APACSA
Trigger: TGCTGAGCAAGCTGGAGCTCAGGCTCTCATACATTT...TTTGGCTACTCTCCTGCGCCCACGGTACCTGGACCTGCTAGTCTCCAGCCCAGC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
CDS-3UTR TCA 90 bp GGAAAAGCTGGGCTGGAGACTAGCAGGTCCAGGTACCGTGGGCGCAGGAGAGTACAGGGCCAAAATGTATaGGAGCCTGAGCTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: GKAGLETSRSRYRGRRRVQGQNV*EPELQL
Trigger: AAGCTGGAGCTCAGGCTCTCATACATTTTGGCCCTG...TACTCTCCTGCGCCCACGGTACCTGGACCTGCTAGTCTCCAGCCCAGCTTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
CDS-3UTR TCA 90 bp AACACGCATTACTGGGCATGTGCTGAGCTTGTGCCAGTGCCAGGACAGGACAGAGGGCCTCAAAGGCCTTaGCACAGAGCTCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: NTHYWACAELVPVPGQDRGPQRP*HRAPRP
Trigger: TGGCCTTGGAGCTCTGTGTCAAGGCCTTTGAGGCCC...TCTGTCCTGTCCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAATGCGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR TCA 90 bp CAGCCAAACAACACGCATTACTGGGCATGTGCTGAGCTTGTGCCAGTGCCAGGAAGTCCGCATAATGTGTaGGGTGGGGAGCCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: QPNNTHYWACAELVPVPGSPHNV*GGEPGL
Trigger: CAGGCCTGGCTCCCCACCTCACACATTATGCGGACT...TCCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAATGCGTGTTGTTTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000459879.1
ENST00000495421.1
CDS-3UTR TCA 90 bp GCTGAGCTTGTGCCAGTGCCAGGACAGGACAGAGACGGATCCTATCCTGTGAAGCCGGGAACTAAGGAATaGGGCTGCAGGACTGCTCTC +
Preference number: 4 (lower is better)
Translates to: AELVPVPGQDRDGSYPVKPGTKE*GCRTAL
Trigger: GAGAGCAGTCCTGCAGCCTCATTCCTTAGTTCCCGG...CTTCACAGGATAGGATCCGTCTCTGTCCTGTCCTGGCACTGGCACAAGCTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000527319.1
CDS-3UTR TCA 90 bp GGGGATGGGAGGTTGGTGCAGGGAGCACTAAAGGTCCTAGCAGCCATTCATAAGACGGATCCTATCCTGTaGAGGGCTGCCTGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: GDGRLVQGALKVLAAIHKTDPIL*RAACSP
Trigger: GGGAGAGCAGGCAGCCCTTCACAGGATAGGATCCGT...CTTATGAATGGCTGCTAGGACCTTTAGTGCTCCCTGCACCAACCTCCCATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000524776.5
ENST00000527319.1
CDS-3UTR TCA 90 bp CTCATCCTGAGTCTTCCCTGTATCTGGACAGCAGGAGGAGAAGGGTTGACCTGGACGGATCCTATCCTGTaGAGGGCTGCCTGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: LILSLPCIWTAGGEGLTWTDPIL*RAACSP
Trigger: GGGAGAGCAGGCAGCCCTTCACAGGATAGGATCCGT...CCAGGTCAACCCTTCTCCTCCTGCTGTCCAGATACAGGGAAGACTCAGGATGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR TCA 90 bp CAGATGGGTCCAGAGGCCTCAGGGAAGTCCCTAAGCCCTTTATTCCATCAGCCAACGGATCCTATCCTGTaGAGGGCTGCCTGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: QMGPEASGKSLSPLFHQPTDPIL*RAACSP
Trigger: GGGAGAGCAGGCAGCCCTTCACAGGATAGGATCCGT...TGGCTGATGGAATAAAGGGCTTAGGGACTTCCCTGAGGCCTCTGGACCCATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
ENST00000527319.1
CDS-3UTR TCA 90 bp AACACGCATTACTGGGCATGTGCTGAGCTTGTGCCAGTGCCAGGACAGGACAGACTGGGGGAGTGCTTCTaGTGTCTAGTGGGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: NTHYWACAELVPVPGQDRLGECF*CLVGRG
Trigger: GCCTCTGCCCACTAGACATCAGAAGCACTCCCCCAG...TCTGTCCTGTCCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAATGCGTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR GCA 90 bp ACAGACCCTCAACTGCAGCCTGGGAACTGGGATTGGCCAAAGGTCCTGGGCTGCAGCTGGTCAGGGAACTaGAAGGCAACTCGTTCACAC +
Preference number: 4 (lower is better)
Translates to: TDPQLQPGNWDWPKVLGCSWSGN*KATRSH
Trigger: GTGTGAACGAGTTGCCTTGCAGTTCCCTGACCAGCT...GCAGCCCAGGACCTTTGGCCAATCCCAGTTCCCAGGCTGCAGTTGAGGGTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255108.8
ENST00000396758.6
CDS-3UTR GCA 90 bp CAGATGGGTCCAGAGGCCTCAGGGAAGTCCCTAAGCCCTTTATTCCATCAGCCACGTCTCCTCCAGTCGTaGAGCCACAGCCACAGCATC +
Preference number: 4 (lower is better)
Translates to: QMGPEASGKSLSPLFHQPRLLQS*SHSHSI
Trigger: GATGCTGTGGCTGTGGCTGCACGACTGGAGGAGACG...TGGCTGATGGAATAAAGGGCTTAGGGACTTCCCTGAGGCCTCTGGACCCATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR GCA 90 bp AGGGCCAAAATGTATGAGAGCCTGAGCTCCAGCTTGCTCAGCACCCAGCACATCCGTCTCCTCCAGTCGTaGAGCCACAGCCACAGCATC +
Preference number: 4 (lower is better)
Translates to: RAKMYESLSSSLLSTQHIRLLQS*SHSHSI
Trigger: GATGCTGTGGCTGTGGCTGCACGACTGGAGGAGACG...GATGTGCTGGGTGCTGAGCAAGCTGGAGCTCAGGCTCTCATACATTTTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000532140.1
CDS-3UTR GCA 90 bp GATGACTTCCAGGCAGGTGGGGGTCGGAGATCTCCAGTAATGAGTGACACGTCTCGTCTCCTCCAGTCGTaGAGCCACAGCCACAGCATC +
Preference number: 4 (lower is better)
Translates to: DDFQAGGGRRSPVMSDTSRLLQS*SHSHSI
Trigger: GATGCTGTGGCTGTGGCTGCACGACTGGAGGAGACG...AGACGTGTCACTCATTACTGGAGATCTCCGACCCCCACCTGCCTGGAAGTCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR GCA 90 bp GCACCCAGAGGACAGGCTAATAGCACAAAGACATCCACCTCAGGGAAGTTGGCAGAAGGGTTGACCTGGTaGCCACCCCAAGAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: APRGQANSTKTSTSGKLAEGLTW*PPQEQP
Trigger: CGGCTGCTCTTGGGGTGGGCACCAGGTCAACCCTTC...TGCCAACTTCCCTGAGGTGGATGTCTTTGTGCTATTAGCCTGTCCTCTGGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR GCA 90 bp GCTGAGCACCCTACCATACACCAGACAGCCCCACAACAAAGAATTATCTGGCCCGGGCTACACCCAGTGTaGCTGCCAGCAGCCCTACCA +
Preference number: 4 (lower is better)
Translates to: AEHPTIHQTAPQQRIIWPGLHPV*LPAALP
Trigger: TGGTAGGGCTGCTGGCAGGCACACTGGGTGTAGCCC...GGGCCAGATAATTCTTTGTTGTGGGGCTGTCTGGTGTATGGTAGGGTGCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255108.8
ENST00000495421.1
CDS-3UTR GCA 90 bp AGAGCTCCAAGGCCACAGAACGTTGACGAAGCACGAAGGCAACGGGCAGTGGGCACACATAGCTACGCTTaGCAGCAGCCTGAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: RAPRPQNVDEARRQRAVGTHSYA*QQPESG
Trigger: ACCTGACTCAGGCTGCTGGCAAGCGTAGCTATGTGT...GCCCACTGCCCGTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTTGGAGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495421.1
CDS-3UTR GCA 90 bp CATCAGCCAAACAACACGCATTACTGGGCATGTGCTGAGCTTGTGCCAGTGCCAGTGGCCAGGCAGGGTTaGAGGCAGCTTCCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: HQPNNTHYWACAELVPVPVARQG*RQLPAH
Trigger: GTGAGCTGGAAGCTGCCTGCAACCCTGCCTGGCCAC...TGGCACTGGCACAAGCTCAGCACATGCCCAGTAATGCGTGTTGTTTGGCTGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000459879.1
ENST00000495421.1
CDS-3UTR GCA 90 bp GCTGAGCTTGTGCCAGTGCCAGGACAGGACAGAGACGGATCCTATCCTGTGAAGATGAGGCTGCAGGACTaGTCTCAGCCAGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: AELVPVPGQDRDGSYPVKMRLQD*SQPAPA
Trigger: AGCTGGAGCTGGCTGAGAGCAGTCCTGCAGCCTCAT...CTTCACAGGATAGGATCCGTCTCTGTCCTGTCCTGGCACTGGCACAAGCTCAGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000527319.1
CDS-3UTR GCA 90 bp GAGCACCCTACCATACACCAGACAGCCCCACAACAAAGAATTATCTGGCCCCAACGGGGCTCCAGCCCTTaGCAGCTCCGGGAACTAAGG +
Preference number: 4 (lower is better)
Translates to: EHPTIHQTAPQQRIIWPQRGSSP*QLRELR
Trigger: CCTTAGTTCCCGGAGCTGGCAAGGGCTGGAGCCCCG...TTGGGGCCAGATAATTCTTTGTTGTGGGGCTGTCTGGTGTATGGTAGGGTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR GCA 90 bp GGAGCACTAAAGGTCCTAGCAGCCATTCATAAGTCCATCTATGTCTCCAGCCCCCGGGGCTCCAGCCCTTaGCAGCTCCGGGAACTAAGG +
Preference number: 4 (lower is better)
Translates to: GALKVLAAIHKSIYVSSPRGSSP*QLRELR
Trigger: CCTTAGTTCCCGGAGCTGGCAAGGGCTGGAGCCCCG...GGGGCTGGAGACATAGATGGACTTATGAATGGCTGCTAGGACCTTTAGTGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000524776.5
ENST00000527319.1
CDS-3UTR GCA 90 bp CATTACTGGGCATGTGCTGAGCTTGTGCCAGTGCCAGGACAGGACAGAGACGGACTGAGCTTGTGCCAGTaGCAGGACAGGACAGAGACG +
Preference number: 4 (lower is better)
Translates to: HYWACAELVPVPGQDRDGLSLCQ*QDRTET
Trigger: CGTCTCTGTCCTGTCCTGGCACTGGCACAAGCTCAG...TCCGTCTCTGTCCTGTCCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000527319.1
CDS-3UTR GCA 90 bp CCCAGAATGAACATCTTTGACCCTGTCGTCTCCTCCAGTCGTGCAGCCACAGCCAGCTGGTCAGGGAACTaGAAGGCAACACCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: PRMNIFDPVVSSSRAATASWSGN*KATPQV
Trigger: GACCTGGGGTGTTGCCTTGCAGTTCCCTGACCAGCT...GGCTGTGGCTGCACGACTGGAGGAGACGACAGGGTCAAAGATGTTCATTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532140.1
CDS-3UTR CCA 90 bp GAGCACCCTACCATACACCAGACAGCCCCACAACAAAGAATTATCTGGCCCCAAGCACAGCTTGGGTGGTaGGATGCAGCGGGGACCTCC +
Preference number: 4 (lower is better)
Translates to: EHPTIHQTAPQQRIIWPQAQLGW*DAAGTS
Trigger: GGAGGTCCCCGCTGCATCCCACCACCCAAGCTGTGC...TTGGGGCCAGATAATTCTTTGTTGTGGGGCTGTCTGGTGTATGGTAGGGTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CCA 90 bp AGGGCCAAAATGTATGAGAGCCTGAGCTCCAGCTTGCTCAGCACCCAGCACATCAGGAGTAAGCAGTCCTaGCACCCCGGTCTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: RAKMYESLSSSLLSTQHIRSKQS*HPGLSL
Trigger: CAGCGAGAGACCGGGGTGCCAGGACTGCTTACTCCT...GATGTGCTGGGTGCTGAGCAAGCTGGAGCTCAGGCTCTCATACATTTTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000532140.1
CDS-3UTR CCA 90 bp TGGGCTGCCCTCAGGAAGACAGATGGGTCCAGAGGCCTCAGGGAAGTCCCTAAGGCATCTCCCAATAGCTaGTCAGGGAACTGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: WAALRKTDGSRGLREVPKASPNS*SGNCKA
Trigger: TGCCTTGCAGTTCCCTGACCAGCTATTGGGAGATGC...CTTAGGGACTTCCCTGAGGCCTCTGGACCCATCTGTCTTCCTGAGGGCAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CCA 90 bp GGAAAAGCTGGGCTGGAGACTAGCAGGTCCAGGTACCGTGGGCGCAGGAGAGTAGCATCTCCCAATAGCTaGTCAGGGAACTGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: GKAGLETSRSRYRGRRRVASPNS*SGNCKA
Trigger: TGCCTTGCAGTTCCCTGACCAGCTATTGGGAGATGC...TACTCTCCTGCGCCCACGGTACCTGGACCTGCTAGTCTCCAGCCCAGCTTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
CDS-3UTR CCA 90 bp CTCCAGCTTGCTCAGCACCCAGCACATCCACGCAGCAGCTGCAGGGAAGATAGCGCATCTCCCAATAGCTaGTCAGGGAACTGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: LQLAQHPAHPRSSCREDSASPNS*SGNCKA
Trigger: TGCCTTGCAGTTCCCTGACCAGCTATTGGGAGATGC...GCTATCTTCCCTGCAGCTGCTGCGTGGATGTGCTGGGTGCTGAGCAAGCTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492306.5
CDS-3UTR CCA 90 bp CAGCCAAACAACACGCATTACTGGGCATGTGCTGAGCTTGTGCCAGTGCCAGGAAGGCGCTTTGGGGTCTaGGTTCTGGGCCTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: QPNNTHYWACAELVPVPGRRFGV*VLGLKG
Trigger: GCCTTTGAGGCCCAGAACCCAGACCCCAAAGCGCCT...TCCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAATGCGTGTTGTTTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
CDS-3UTR CCA 90 bp CAGATGGGTCCAGAGGCCTCAGGGAAGTCCCTAAGCCCTTTATTCCATCAGCCAAGGCGCTTTGGGGTCTaGGTTCTGGGCCTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: QMGPEASGKSLSPLFHQPRRFGV*VLGLKG
Trigger: GCCTTTGAGGCCCAGAACCCAGACCCCAAAGCGCCT...TGGCTGATGGAATAAAGGGCTTAGGGACTTCCCTGAGGCCTCTGGACCCATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CCA 90 bp CATCAGCCAAACAACACGCATTACTGGGCATGTGCTGAGCTTGTGCCAGTGCCAAAAGCCTCCAGGGCATaGGCACAGGCCGGCTCACTC +
Preference number: 4 (lower is better)
Translates to: HQPNNTHYWACAELVPVPKASRA*AQAGSL
Trigger: GAGTGAGCCGGCCTGTGCCCATGCCCTGGAGGCTTT...TGGCACTGGCACAAGCTCAGCACATGCCCAGTAATGCGTGTTGTTTGGCTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255108.8
ENST00000495421.1
CDS-3UTR CCA 90 bp GCTGAGCACCCTACCATACACCAGACAGCCCCACAACAAAGAATTATCTGGCCCAAAGCCTCCAGGGCATaGGCACAGGCCGGCTCACTC +
Preference number: 4 (lower is better)
Translates to: AEHPTIHQTAPQQRIIWPKASRA*AQAGSL
Trigger: GAGTGAGCCGGCCTGTGCCCATGCCCTGGAGGCTTT...GGGCCAGATAATTCTTTGTTGTGGGGCTGTCTGGTGTATGGTAGGGTGCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255108.8
ENST00000495421.1
CDS-3UTR CCA 90 bp GGCCTTGACACAGAGCTCCAAGGCCACAGAACGTTGACGAAGCACGAAGGCAACGGGGAAAAGCTGGGCTaGAGACTAGCAGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GLDTELQGHRTLTKHEGNGEKLG*RLAGPG
Trigger: ACCTGGACCTGCTAGTCTCCAGCCCAGCTTTTCCCC...GTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTTGGAGCTCTGTGTCAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
CDS-3UTR CCA 90 bp AGTGCCAGGACAGGACAGAGACGGATCCTATCCTGTGAAGGGCTGCCTGCTCTCACTCAGGGAACCCACTaGTTGGGGAAAAGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: SARTGQRRILSCEGLPALTQGTH*LGKSWA
Trigger: AGCCCAGCTTTTCCCCAACCAGTGGGTTCCCTGAGT...GAGAGCAGGCAGCCCTTCACAGGATAGGATCCGTCTCTGTCCTGTCCTGGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CCA 90 bp ACACGCATTACTGGGCATGTGCTGAGCTTGTGCCAGTGCCAGGACAGGACAGAGAGTGCCTCACGGTGTTaGGCTACACCCAGTGTGCCT +
Preference number: 4 (lower is better)
Translates to: TRITGHVLSLCQCQDRTESASRC*ATPSVP
Trigger: AGGCACACTGGGTGTAGCCCAACACCGTGAGGCACT...CTCTGTCCTGTCCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAATGCGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000459879.1
ENST00000495421.1
CDS-3UTR CCA 90 bp CCAAACAACACGCATTACTGGGCATGTGCTGAGCTTGTGCCAGTGCCAGGACAGGTCAGGTTCCGCAAGTaGGCCAGTGCCTCACGGTGT +
Preference number: 4 (lower is better)
Translates to: PNNTHYWACAELVPVPGQVRFRK*ASASRC
Trigger: ACACCGTGAGGCACTGGCCCACTTGCGGAACCTGAC...CTGTCCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAATGCGTGTTGTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000459879.1
ENST00000495421.1
CDS-3UTR CCA 90 bp TTCCATCAGCCAAACAACACGCATTACTGGGCATGTGCTGAGCTTGTGCCAGTGCTCCAGCTGGGGCCGTaGGGTCAGAGCCAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: FHQPNNTHYWACAELVPVLQLGP*GQSQAS
Trigger: GGAAGCTTGGCTCTGACCCCACGGCCCCAGCTGGAG...CACTGGCACAAGCTCAGCACATGCCCAGTAATGCGTGTTGTTTGGCTGATGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000527319.1
CDS-3UTR CCA 90 bp GCAGCCATTCATAAGTCCATCTATGTCTCCAGCCCCACATGGTATCAGCCGCTTCTCCAGCTGGGGCCGTaGGGTCAGAGCCAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: AAIHKSIYVSSPTWYQPLLQLGP*GQSQAS
Trigger: GGAAGCTTGGCTCTGACCCCACGGCCCCAGCTGGAG...AAGCGGCTGATACCATGTGGGGCTGGAGACATAGATGGACTTATGAATGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000495421.1
ENST00000524776.5
ENST00000527319.1
CDS-3UTR CCA 90 bp ATTCATAAGTCCATCTATGTCTCCAGCCCCACATGGTATCAGCCGCTTCCCTCATCAGCCAGCTCCAGCTaGGGCCGTGGGGTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: IHKSIYVSSPTWYQPLPSSASSS*GRGVRA
Trigger: GGCTCTGACCCCACGGCCCCAGCTGGAGCTGGCTGA...TGAGGGAAGCGGCTGATACCATGTGGGGCTGGAGACATAGATGGACTTATGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000495421.1
ENST00000524776.5
ENST00000527319.1
CDS-3UTR CCA 90 bp TGGGCTGCCCTCAGGAAGACAGATGGGTCCAGAGGCCTCAGGGAAGTCCCTAAGCATCCTCATAGGCGATaGCAATCCCTCGTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: WAALRKTDGSRGLREVPKHPHRR*QSLVFH
Trigger: GTGGAAGACGAGGGATTGCCATCGCCTATGAGGATG...CTTAGGGACTTCCCTGAGGCCTCTGGACCCATCTGTCTTCCTGAGGGCAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CCA 90 bp GTGCCAGTGCCAGGACAGGACAGAGACGGATCCTATCCTGTGAAGGGCTGCCTGCATCCTCATAGGCGATaGCAATCCCTCGTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: VPVPGQDRDGSYPVKGCLHPHRR*QSLVFH
Trigger: GTGGAAGACGAGGGATTGCCATCGCCTATGAGGATG...CAGGCAGCCCTTCACAGGATAGGATCCGTCTCTGTCCTGTCCTGGCACTGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000524776.5
ENST00000527319.1
CDS-3UTR CCA 90 bp GCTGAGCTTGTGCCAGTGCCAGGACAGGACAGAGACGGATCCTATCCTGTGAAGGTCTCCAGCCCCACATaGTATCAGCCGCTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: AELVPVPGQDRDGSYPVKVSSPT*YQPLPS
Trigger: TGAGGGAAGCGGCTGATACCATGTGGGGCTGGAGAC...CTTCACAGGATAGGATCCGTCTCTGTCCTGTCCTGGCACTGGCACAAGCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000527319.1
CDS-3UTR CCA 90 bp GGGGATGGGAGGTTGGTGCAGGGAGCACTAAAGGTCCTAGCAGCCATTCATAAGCCTGGGAACTGGGATTaGCCAAAGGTCCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GDGRLVQGALKVLAAIHKPGNWD*PKVLGC
Trigger: GCAGCCCAGGACCTTTGGCCAATCCCAGTTCCCAGG...CTTATGAATGGCTGCTAGGACCTTTAGTGCTCCCTGCACCAACCTCCCATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR TCA 90 bp ACAGAGCTCCAAGGCCACAGAACGTTGACGAAGCACGAAGGCAACGGGCAGTGGCAGGGCCAAAATGTATaGGAGCCTGAGCTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: TELQGHRTLTKHEGNGQWQGQNV*EPELQL
Trigger: AAGCTGGAGCTCAGGCTCTCATACATTTTGGCCCTG...CCACTGCCCGTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTTGGAGCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
CDS-3UTR TCA 90 bp CACAGAGCTCCAAGGCCACAGAACGTTGACGAAGCACGAAGGCAACGGGCAGTGCAGGGCCAAAATGTATaGGAGCCTGAGCTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: HRAPRPQNVDEARRQRAVQGQNV*EPELQL
Trigger: AAGCTGGAGCTCAGGCTCTCATACATTTTGGCCCTG...CACTGCCCGTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTTGGAGCTCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
CDS-3UTR TCA 90 bp GTTGTCACAACTGGGGGAGTGCTTCTGATGTCTAGTGGGCAGAGGCCAGGGATGAAGGCCACAGAACGTTaGCGAAGCACGAAGGCAACG +
Preference number: 4 (lower is better)
Translates to: VVTTGGVLLMSSGQRPGMKATER*RSTKAT
Trigger: CGTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTT...CATCCCTGGCCTCTGCCCACTAGACATCAGAAGCACTCCCCCAGTTGTGACAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR TCA 90 bp GCTGAGCACCCTACCATACACCAGACAGCCCCACAACAAAGAATTATCTGGCCCGGTTTCCCACAGCTCTaGCTCAGGTGGTGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: AEHPTIHQTAPQQRIIWPGFPQL*LRWWES
Trigger: GCTCTCCCACCACCTGAGTCAGAGCTGTGGGAAACC...GGGCCAGATAATTCTTTGTTGTGGGGCTGTCTGGTGTATGGTAGGGTGCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR TCA 90 bp TGGGCTGCCCTCAGGAAGACAGATGGGTCCAGAGGCCTCAGGGAAGTCCCTAAGATCTCCAGTAATGAGTaGCACGTCTGGGGTTTCCCA +
Preference number: 4 (lower is better)
Translates to: WAALRKTDGSRGLREVPKISSNE*HVWGFP
Trigger: TGGGAAACCCCAGACGTGTCACTCATTACTGGAGAT...CTTAGGGACTTCCCTGAGGCCTCTGGACCCATCTGTCTTCCTGAGGGCAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR TCA 90 bp CGCGGGCATCTCTGGCCCTCTCTACCAGATATCGTCTTCGTGCCCTTAGCCGTCATCTCCAGTAATGAGTaGCACGTCTGGGGTTTCCCA +
Preference number: 4 (lower is better)
Translates to: RGHLWPSLPDIVFVPLAVISSNE*HVWGFP
Trigger: TGGGAAACCCCAGACGTGTCACTCATTACTGGAGAT...GACGGCTAAGGGCACGAAGACGATATCTGGTAGAGAGGGCCAGAGATGCCCGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR TCA 90 bp AACACGCATTACTGGGCATGTGCTGAGCTTGTGCCAGTGCCAGGACAGGACAGACCGGGAACTAAGGAATaGGGCTGCAGGACTGCTCTC +
Preference number: 4 (lower is better)
Translates to: NTHYWACAELVPVPGQDRPGTKE*GCRTAL
Trigger: GAGAGCAGTCCTGCAGCCTCATTCCTTAGTTCCCGG...TCTGTCCTGTCCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAATGCGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000527319.1
CDS-3UTR TCA 90 bp GCACCCAGAGGACAGGCTAATAGCACAAAGACATCCACCTCAGGGAAGTTGGCACTGGGGGAGTGCTTCTaGTGTCTAGTGGGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: APRGQANSTKTSTSGKLALGECF*CLVGRG
Trigger: GCCTCTGCCCACTAGACATCAGAAGCACTCCCCCAG...TGCCAACTTCCCTGAGGTGGATGTCTTTGTGCTATTAGCCTGTCCTCTGGGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495421.1
CDS-3UTR GCA 90 bp CAGCCAAACAACACGCATTACTGGGCATGTGCTGAGCTTGTGCCAGTGCCAGGACCAAAGGTCCTGGGCTaGCCTCAGGAAGACAGATGG +
Preference number: 4 (lower is better)
Translates to: QPNNTHYWACAELVPVPGPKVLG*PQEDRW
Trigger: CCATCTGTCTTCCTGAGGGCAGCCCAGGACCTTTGG...TCCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAATGCGTGTTGTTTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CCA 90 bp CTTGACACAGAGCTCCAAGGCCACAGAACGTTGACGAAGCACGAAGGCAACGGGTTGGGGTCTGGGTTCTaGGCCTCAAAGGCCTTGACA +
Preference number: 4 (lower is better)
Translates to: LDTELQGHRTLTKHEGNGLGSGF*ASKALT
Trigger: TGTCAAGGCCTTTGAGGCCCAGAACCCAGACCCCAA...CCCGTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTTGGAGCTCTGTGTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
CDS-3UTR CCA 90 bp GCACCCAGAGGACAGGCTAATAGCACAAAGACATCCACCTCAGGGAAGTTGGCAGGAGAAGGGTTGACCTaGTGCCCACCCCAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: APRGQANSTKTSTSGKLAGEGLT*CPPQEQ
Trigger: CTGCTCTTGGGGTGGGCACCAGGTCAACCCTTCTCC...TGCCAACTTCCCTGAGGTGGATGTCTTTGTGCTATTAGCCTGTCCTCTGGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CCA 90 bp CAGATGGGTCCAGAGGCCTCAGGGAAGTCCCTAAGCCCTTTATTCCATCAGCCACCACGCGGGCATCTCTaGCCCTCTCTACCAGATATC +
Preference number: 4 (lower is better)
Translates to: QMGPEASGKSLSPLFHQPPRGHL*PSLPDI
Trigger: GATATCTGGTAGAGAGGGCCAGAGATGCCCGCGTGG...TGGCTGATGGAATAAAGGGCTTAGGGACTTCCCTGAGGCCTCTGGACCCATCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255108.8
ENST00000495421.1
CDS-3UTR CCA 90 bp AGCCAAACAACACGCATTACTGGGCATGTGCTGAGCTTGTGCCAGTGCCAGGACAGTGCCTCACGGTGTTaGGCTACACCCAGTGTGCCT +
Preference number: 4 (lower is better)
Translates to: SQTTRITGHVLSLCQCQDSASRC*ATPSVP
Trigger: AGGCACACTGGGTGTAGCCCAACACCGTGAGGCACT...GTCCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAATGCGTGTTGTTTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000459879.1
ENST00000495421.1
CDS-3UTR CCA 90 bp CTAAAGGTCCTAGCAGCCATTCATAAGTCCATCTATGTCTCCAGCCCCACATGGGGAAGTTGGCAAGCTTaGCAGGGGTGGGCCGCCCCA +
Preference number: 4 (lower is better)
Translates to: LKVLAAIHKSIYVSSPTWGSWQA*QGWAAP
Trigger: TGGGGCGGCCCACCCCTGCCAAGCTTGCCAACTTCC...CCATGTGGGGCTGGAGACATAGATGGACTTATGAATGGCTGCTAGGACCTTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000255108.8
ENST00000459879.1
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CCA 90 bp GCACTAAAGGTCCTAGCAGCCATTCATAAGTCCATCTATGTCTCCAGCCCCACAGGAAGTTGGCAAGCTTaGCAGGGGTGGGCCGCCCCA +
Preference number: 4 (lower is better)
Translates to: ALKVLAAIHKSIYVSSPTGSWQA*QGWAAP
Trigger: TGGGGCGGCCCACCCCTGCCAAGCTTGCCAACTTCC...TGTGGGGCTGGAGACATAGATGGACTTATGAATGGCTGCTAGGACCTTTAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000255108.8
ENST00000459879.1
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CCA 90 bp ACACGCATTACTGGGCATGTGCTGAGCTTGTGCCAGTGCCAGGACAGGACAGAGAAGCTACCAGAAAGCTaGGGGGCTAGAGCACCCAGA +
Preference number: 4 (lower is better)
Translates to: TRITGHVLSLCQCQDRTEKLPES*GARAPR
Trigger: TCTGGGTGCTCTAGCCCCCCAGCTTTCTGGTAGCTT...CTCTGTCCTGTCCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAATGCGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000459879.1
ENST00000495421.1
CDS-3UTR CCA 90 bp AAACCCTGGTCTAGACTGTCTAGCACCTGCCTTTTGACAAGGACAGACCCTCAACTCCAGCTGGGGCCGTaGGGTCAGAGCCAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: KPWSRLSSTCLLTRTDPQLQLGP*GQSQAS
Trigger: GGAAGCTTGGCTCTGACCCCACGGCCCCAGCTGGAG...TTGAGGGTCTGTCCTTGTCAAAAGGCAGGTGCTAGACAGTCTAGACCAGGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CCA 90 bp TTATTCCATCAGCCAAACAACACGCATTACTGGGCATGTGCTGAGCTTGTGCCATCAGCCAGCTCCAGCTaGGGCCGTGGGGTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: LFHQPNNTHYWACAELVPSASSS*GRGVRA
Trigger: GGCTCTGACCCCACGGCCCCAGCTGGAGCTGGCTGA...TGGCACAAGCTCAGCACATGCCCAGTAATGCGTGTTGTTTGGCTGATGGAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000527319.1
CDS-3UTR CCA 90 bp AGTGCCAGGACAGGACAGAGACGGATCCTATCCTGTGAAGGGCTGCCTGCTCTCCATCCTCATAGGCGATaGCAATCCCTCGTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: SARTGQRRILSCEGLPALHPHRR*QSLVFH
Trigger: GTGGAAGACGAGGGATTGCCATCGCCTATGAGGATG...GAGAGCAGGCAGCCCTTCACAGGATAGGATCCGTCTCTGTCCTGTCCTGGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000524776.5
ENST00000527319.1
CDS-3UTR CCA 90 bp ACCCTCAACTGCAGCCTGGGAACTGGGATTGGCCAAAGGTCCTGGGCTGCCCTCAACAACACGCATTACTaGGCATGTGCTGAGCTTGTG +
Preference number: 4 (lower is better)
Translates to: TLNCSLGTGIGQRSWAALNNTHY*ACAELV
Trigger: CACAAGCTCAGCACATGCCCAGTAATGCGTGTTGTT...GAGGGCAGCCCAGGACCTTTGGCCAATCCCAGTTCCCAGGCTGCAGTTGAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR TCA 90 bp CCAGAGGACAGGCTAATAGCACAAAGACATCCACCTCAGGGAAGTTGGCAAGCTTCGGCCTTCAGCCGGTaGGTATCCCCTTCAGCCATC +
Preference number: 4 (lower is better)
Translates to: PEDRLIAQRHPPQGSWQASAFSR*VSPSAI
Trigger: GATGGCTGAAGGGGATACTCACCGGCTGAAGGCCGA...AGCTTGCCAACTTCCCTGAGGTGGATGTCTTTGTGCTATTAGCCTGTCCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR TCA 90 bp GACACAGAGCTCCAAGGCCACAGAACGTTGACGAAGCACGAAGGCAACGGGCAGCTGTGTCACCCAGAATaGACATCTTTGACCCTGTCG +
Preference number: 4 (lower is better)
Translates to: DTELQGHRTLTKHEGNGQLCHPE*TSLTLS
Trigger: CGACAGGGTCAAAGATGTTCATTCTGGGTGACACAG...CTGCCCGTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTTGGAGCTCTGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
CDS-3UTR TCA 90 bp GGCAGGGCCAAAATGTATGAGAGCCTGAGCTCCAGCTTGCTCAGCACCCAGCACAAATGTATGAGAGCCTaGGCTCCAGCTTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: GRAKMYESLSSSLLSTQHKCMRA*APACSA
Trigger: TGCTGAGCAAGCTGGAGCTCAGGCTCTCATACATTT...GTGCTGGGTGCTGAGCAAGCTGGAGCTCAGGCTCTCATACATTTTGGCCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000532140.1
CDS-3UTR TCA 90 bp GACACAGAGCTCCAAGGCCACAGAACGTTGACGAAGCACGAAGGCAACGGGCAGAAATGTATGAGAGCCTaGGCTCCAGCTTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: DTELQGHRTLTKHEGNGQKCMRA*APACSA
Trigger: TGCTGAGCAAGCTGGAGCTCAGGCTCTCATACATTT...CTGCCCGTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTTGGAGCTCTGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
CDS-3UTR TCA 90 bp AAACCCTGGTCTAGACTGTCTAGCACCTGCCTTTTGACAAGGACAGACCCTCAACGCTTGCCAGCAGCCTaGGTCAGGTTCCGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: KPWSRLSSTCLLTRTDPQRLPAA*VRFRKW
Trigger: CCACTTGCGGAACCTGACTCAGGCTGCTGGCAAGCG...TTGAGGGTCTGTCCTTGTCAAAAGGCAGGTGCTAGACAGTCTAGACCAGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255108.8
ENST00000495421.1
CDS-3UTR TCA 90 bp CTAAAGGTCCTAGCAGCCATTCATAAGTCCATCTATGTCTCCAGCCCCACATGGCGCTTGCCAGCAGCCTaGGTCAGGTTCCGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: LKVLAAIHKSIYVSSPTWRLPAA*VRFRKW
Trigger: CCACTTGCGGAACCTGACTCAGGCTGCTGGCAAGCG...CCATGTGGGGCTGGAGACATAGATGGACTTATGAATGGCTGCTAGGACCTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255108.8
ENST00000459879.1
ENST00000495421.1
ENST00000524776.5
CDS-3UTR TCA 90 bp GTTGTCACAACTGGGGGAGTGCTTCTGATGTCTAGTGGGCAGAGGCCAGGGATGCTAGCACCTGCCTTTTaGCAAGGACAGACCCTCAAC +
Preference number: 4 (lower is better)
Translates to: VVTTGGVLLMSSGQRPGMLAPAF*QGQTLN
Trigger: GTTGAGGGTCTGTCCTTGTCAAAAGGCAGGTGCTAG...CATCCCTGGCCTCTGCCCACTAGACATCAGAAGCACTCCCCCAGTTGTGACAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR GCA 90 bp GCACTAAAGGTCCTAGCAGCCATTCATAAGTCCATCTATGTCTCCAGCCCCACATACACCCAGTGTGCCTaGCAGCAGCCCTACCACGCG +
Preference number: 4 (lower is better)
Translates to: ALKVLAAIHKSIYVSSPTYTQCA*QQPYHA
Trigger: CGCGTGGTAGGGCTGCTGGCAGGCACACTGGGTGTA...TGTGGGGCTGGAGACATAGATGGACTTATGAATGGCTGCTAGGACCTTTAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255108.8
ENST00000459879.1
ENST00000495421.1
ENST00000524776.5
CDS-3UTR GCA 90 bp CTGGCCCCAAATGTCAAGTACGAGTTTGAGAAACCCTGGTCTAGACTGTCTAGCTACACCCAGTGTGCCTaGCAGCAGCCCTACCACGCG +
Preference number: 4 (lower is better)
Translates to: LAPNVKYEFEKPWSRLSSYTQCA*QQPYHA
Trigger: CGCGTGGTAGGGCTGCTGGCAGGCACACTGGGTGTA...GCTAGACAGTCTAGACCAGGGTTTCTCAAACTCGTACTTGACATTTGGGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255108.8
ENST00000495421.1
CDS-3UTR GCA 90 bp TGTGCTGAGCTTGTGCCAGTGCCAGGACAGGACAGAGACGGATCCTATCCTGTGACACATAGCTACGCTTaGCAGCAGCCTGAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: CAELVPVPGQDRDGSYPVTHSYA*QQPESG
Trigger: ACCTGACTCAGGCTGCTGGCAAGCGTAGCTATGTGT...CACAGGATAGGATCCGTCTCTGTCCTGTCCTGGCACTGGCACAAGCTCAGCACA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000459879.1
ENST00000495421.1
CDS-3UTR GCA 90 bp TCAGCCGCTTCCCTCATCCTCATAGGCGATGGCAATCCCTCGTCTTCCACTCACACACATAGCTACGCTTaGCAGCAGCCTGAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: SAASLILIGDGNPSSSTHTHSYA*QQPESG
Trigger: ACCTGACTCAGGCTGCTGGCAAGCGTAGCTATGTGT...GTGAGTGGAAGACGAGGGATTGCCATCGCCTATGAGGATGAGGGAAGCGGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR GCA 90 bp TTAGCCGTCCAGCCCGGGCACCCTCATCCTGAGTCTTCCCTGTATCTGGACAGCTTCCAGCTCACATGGTaGCAGTATAGGCTGGAAGAA +
Preference number: 4 (lower is better)
Translates to: LAVQPGHPHPESSLYLDSFQLTW*QYRLEE
Trigger: TTCTTCCAGCCTATACTGGCACCATGTGAGCTGGAA...GCTGTCCAGATACAGGGAAGACTCAGGATGAGGGTGCCCGGGCTGGACGGCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR GCA 90 bp CTGGCCCCAAATGTCAAGTACGAGTTTGAGAAACCCTGGTCTAGACTGTCTAGCGTGGCCAGGCAGGGTTaGAGGCAGCTTCCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: LAPNVKYEFEKPWSRLSSVARQG*RQLPAH
Trigger: GTGAGCTGGAAGCTGCCTGCAACCCTGCCTGGCCAC...GCTAGACAGTCTAGACCAGGGTTTCTCAAACTCGTACTTGACATTTGGGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255108.8
ENST00000495421.1
CDS-3UTR GCA 90 bp GCTGAGCACCCTACCATACACCAGACAGCCCCACAACAAAGAATTATCTGGCCCATGAGGCTGCAGGACTaGTCTCAGCCAGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: AEHPTIHQTAPQQRIIWPMRLQD*SQPAPA
Trigger: AGCTGGAGCTGGCTGAGAGCAGTCCTGCAGCCTCAT...GGGCCAGATAATTCTTTGTTGTGGGGCTGTCTGGTGTATGGTAGGGTGCTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR GCA 90 bp GTCCAACCAATAGAACTTTCTGCCATGATGGCATATCCTGTAGCTGCACTGTCCCGGGGCTCCAGCCCTTaGCAGCTCCGGGAACTAAGG +
Preference number: 4 (lower is better)
Translates to: VQPIELSAMMAYPVAALSRGSSP*QLRELR
Trigger: CCTTAGTTCCCGGAGCTGGCAAGGGCTGGAGCCCCG...GGACAGTGCAGCTACAGGATATGCCATCATGGCAGAAAGTTCTATTGGTTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR GCA 90 bp GGACAGACCCTCAACTGCAGCCTGGGAACTGGGATTGGCCAAAGGTCCTGGGCTAGACTGTCTAGCACCTaGCTTTTGACAAGGACAGAC +
Preference number: 4 (lower is better)
Translates to: GQTLNCSLGTGIGQRSWARLSST*LLTRTD
Trigger: GTCTGTCCTTGTCAAAAGGCAGGTGCTAGACAGTCT...AGCCCAGGACCTTTGGCCAATCCCAGTTCCCAGGCTGCAGTTGAGGGTCTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR GCA 90 bp GTGCCTCACGGTGTTGGGCTACACCCAGTGTGCCTGCCAGCAGCCCTACCACGCCCCACAGATAACATTTaGCAAGGTCTGGAGATATTT +
Preference number: 4 (lower is better)
Translates to: VPHGVGLHPVCLPAALPRPTDNI*QGLEIF
Trigger: AAATATCTCCAGACCTTGGCAAATGTTATCTGTGGG...GCGTGGTAGGGCTGCTGGCAGGCACACTGGGTGTAGCCCAACACCGTGAGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495421.1
CDS-3UTR CCA 90 bp CCAAATGTCAAGTACGAGTTTGAGAAACCCTGGTCTAGACTGTCTAGCACCTGCGAGGCACAGCTTGGGTaGTGGGATGCAGCGGGGACC +
Preference number: 4 (lower is better)
Translates to: PNVKYEFEKPWSRLSSTCEAQLG*WDAAGT
Trigger: GGTCCCCGCTGCATCCCACCACCCAAGCTGTGCCTC...GCAGGTGCTAGACAGTCTAGACCAGGGTTTCTCAAACTCGTACTTGACATTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CCA 90 bp TCATTTGATGACTTCCAGGCAGGTGGGGGTCGGAGATCTCCAGTAATGAGTGACAGGAGTAAGCAGTCCTaGCACCCCGGTCTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: SFDDFQAGGGRRSPVMSDRSKQS*HPGLSL
Trigger: CAGCGAGAGACCGGGGTGCCAGGACTGCTTACTCCT...GTCACTCATTACTGGAGATCTCCGACCCCCACCTGCCTGGAAGTCATCAAATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CCA 90 bp AACACGCATTACTGGGCATGTGCTGAGCTTGTGCCAGTGCCAGGACAGGACAGATTGGGGTCTGGGTTCTaGGCCTCAAAGGCCTTGACA +
Preference number: 4 (lower is better)
Translates to: NTHYWACAELVPVPGQDRLGSGF*ASKALT
Trigger: TGTCAAGGCCTTTGAGGCCCAGAACCCAGACCCCAA...TCTGTCCTGTCCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAATGCGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CCA 90 bp CTAAAGGTCCTAGCAGCCATTCATAAGTCCATCTATGTCTCCAGCCCCACATGGGCACCACAGGCGCTTTaGGGTCTGGGTTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: LKVLAAIHKSIYVSSPTWAPQAL*GLGSGP
Trigger: AGGCCCAGAACCCAGACCCCAAAGCGCCTGTGGTGC...CCATGTGGGGCTGGAGACATAGATGGACTTATGAATGGCTGCTAGGACCTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
CDS-3UTR CCA 90 bp GTGCAGGGAGCACTAAAGGTCCTAGCAGCCATTCATAAGTCCATCTATGTCTCCGCACCACAGGCGCTTTaGGGTCTGGGTTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: VQGALKVLAAIHKSIYVSAPQAL*GLGSGP
Trigger: AGGCCCAGAACCCAGACCCCAAAGCGCCTGTGGTGC...GGAGACATAGATGGACTTATGAATGGCTGCTAGGACCTTTAGTGCTCCCTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
CDS-3UTR CCA 90 bp AAAATGTATGAGAGCCTGAGCTCCAGCTTGCTCAGCACCCAGCACATCCACGCAGGGGAAAAGCTGGGCTaGAGACTAGCAGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: KMYESLSSSLLSTQHIHAGEKLG*RLAGPG
Trigger: ACCTGGACCTGCTAGTCTCCAGCCCAGCTTTTCCCC...TGCGTGGATGTGCTGGGTGCTGAGCAAGCTGGAGCTCAGGCTCTCATACATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000476260.1
ENST00000492306.5
CDS-3UTR CCA 90 bp GGAGCACTAAAGGTCCTAGCAGCCATTCATAAGTCCATCTATGTCTCCAGCCCCGGTGGGAGAGCCACGTaGAAGGGAGAGCCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: GALKVLAAIHKSIYVSSPGGRAT*KGEPGN
Trigger: ATTGCCTGGCTCTCCCTTCCACGTGGCTCTCCCACC...GGGGCTGGAGACATAGATGGACTTATGAATGGCTGCTAGGACCTTTAGTGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255108.8
ENST00000459879.1
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CCA 90 bp GTGCAGGGAGCACTAAAGGTCCTAGCAGCCATTCATAAGTCCATCTATGTCTCCCACAGCTTCTGTCACTaGCGTCTGACCCAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: VQGALKVLAAIHKSIYVSHSFCH*RLTQAG
Trigger: CCCCGCCTGGGTCAGACGCCAGTGACAGAAGCTGTG...GGAGACATAGATGGACTTATGAATGGCTGCTAGGACCTTTAGTGCTCCCTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000524776.5
ENST00000527319.1
CDS-3UTR CCA 90 bp CATTACTGGGCATGTGCTGAGCTTGTGCCAGTGCCAGGACAGGACAGAGACGGACATCCTCATAGGCGATaGCAATCCCTCGTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: HYWACAELVPVPGQDRDGHPHRR*QSLVFH
Trigger: GTGGAAGACGAGGGATTGCCATCGCCTATGAGGATG...TCCGTCTCTGTCCTGTCCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000527319.1
CDS-3UTR CCA 90 bp TGCCATGATGGCATATCCTGTAGCTGCACTGTCCCCTCATGTGGCTGTCTGAACGTCTCCAGCCCCACATaGTATCAGCCGCTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: CHDGISCSCTVPSCGCLNVSSPT*YQPLPS
Trigger: TGAGGGAAGCGGCTGATACCATGTGGGGCTGGAGAC...GTTCAGACAGCCACATGAGGGGACAGTGCAGCTACAGGATATGCCATCATGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CCA 90 bp TCAGAGCCAAGCTTCCATGATCATTTGATGACTTCCAGGCAGGTGGGGGTCGGAGTCTCCAGCCCCACATaGTATCAGCCGCTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: SEPSFHDHLMTSRQVGVGVSSPT*YQPLPS
Trigger: TGAGGGAAGCGGCTGATACCATGTGGGGCTGGAGAC...TCCGACCCCCACCTGCCTGGAAGTCATCAAATGATCATGGAAGCTTGGCTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000495421.1
ENST00000524776.5
ENST00000527319.1
CDS-3UTR TCA 90 bp AACACGCATTACTGGGCATGTGCTGAGCTTGTGCCAGTGCCAGGACAGGACAGACAGGGCCAAAATGTATaGGAGCCTGAGCTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: NTHYWACAELVPVPGQDRQGQNV*EPELQL
Trigger: AAGCTGGAGCTCAGGCTCTCATACATTTTGGCCCTG...TCTGTCCTGTCCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAATGCGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR TCA 90 bp GCCCCAAATGTCAAGTACGAGTTTGAGAAACCCTGGTCTAGACTGTCTAGCACCGGGCCTCAAAGGCCTTaGCACAGAGCTCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: APNVKYEFEKPWSRLSSTGPQRP*HRAPRP
Trigger: TGGCCTTGGAGCTCTGTGTCAAGGCCTTTGAGGCCC...GGTGCTAGACAGTCTAGACCAGGGTTTCTCAAACTCGTACTTGACATTTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR TCA 90 bp GTGCAGGGAGCACTAAAGGTCCTAGCAGCCATTCATAAGTCCATCTATGTCTCCGGTTTCCCACAGCTCTaGCTCAGGTGGTGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: VQGALKVLAAIHKSIYVSGFPQL*LRWWES
Trigger: GCTCTCCCACCACCTGAGTCAGAGCTGTGGGAAACC...GGAGACATAGATGGACTTATGAATGGCTGCTAGGACCTTTAGTGCTCCCTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000524776.5
ENST00000527319.1
CDS-3UTR TCA 90 bp ATTCATAAGTCCATCTATGTCTCCAGCCCCACATGGTATCAGCCGCTTCCCTCAGGTTTCCCACAGCTCTaGCTCAGGTGGTGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: IHKSIYVSSPTWYQPLPSGFPQL*LRWWES
Trigger: GCTCTCCCACCACCTGAGTCAGAGCTGTGGGAAACC...TGAGGGAAGCGGCTGATACCATGTGGGGCTGGAGACATAGATGGACTTATGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000495421.1
ENST00000524776.5
ENST00000527319.1
CDS-3UTR TCA 90 bp ACAGACCCTCAACTGCAGCCTGGGAACTGGGATTGGCCAAAGGTCCTGGGCTGCAGAGCCAAGCTTCCATaGTCATTTGATGACTTCCAG +
Preference number: 4 (lower is better)
Translates to: TDPQLQPGNWDWPKVLGCRAKLP*SFDDFQ
Trigger: CTGGAAGTCATCAAATGATCATGGAAGCTTGGCTCT...GCAGCCCAGGACCTTTGGCCAATCCCAGTTCCCAGGCTGCAGTTGAGGGTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR TCA 90 bp GAACTAAGGAATGAGGCTGCAGGACTGCTCTCAGCCAGCTCCAGCTGGGGCCGTAGAGCCAAGCTTCCATaGTCATTTGATGACTTCCAG +
Preference number: 4 (lower is better)
Translates to: ELRNEAAGLLSASSSWGRRAKLP*SFDDFQ
Trigger: CTGGAAGTCATCAAATGATCATGGAAGCTTGGCTCT...ACGGCCCCAGCTGGAGCTGGCTGAGAGCAGTCCTGCAGCCTCATTCCTTAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000495421.1
ENST00000524776.5
ENST00000527319.1
CDS-3UTR TCA 90 bp CTAAAGGTCCTAGCAGCCATTCATAAGTCCATCTATGTCTCCAGCCCCACATGGACGGATCCTATCCTGTaGAGGGCTGCCTGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: LKVLAAIHKSIYVSSPTWTDPIL*RAACSP
Trigger: GGGAGAGCAGGCAGCCCTTCACAGGATAGGATCCGT...CCATGTGGGGCTGGAGACATAGATGGACTTATGAATGGCTGCTAGGACCTTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000524776.5
ENST00000527319.1
CDS-3UTR GCA 90 bp CCAAATGTCAAGTACGAGTTTGAGAAACCCTGGTCTAGACTGTCTAGCACCTGCGAAGGGTTGACCTGGTaGCCACCCCAAGAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: PNVKYEFEKPWSRLSSTCEGLTW*PPQEQP
Trigger: CGGCTGCTCTTGGGGTGGGCACCAGGTCAACCCTTC...GCAGGTGCTAGACAGTCTAGACCAGGGTTTCTCAAACTCGTACTTGACATTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255108.8
ENST00000495421.1
CDS-3UTR GCA 90 bp GTCCAACCAATAGAACTTTCTGCCATGATGGCATATCCTGTAGCTGCACTGTCCGTGGCCAGGCAGGGTTaGAGGCAGCTTCCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: VQPIELSAMMAYPVAALSVARQG*RQLPAH
Trigger: GTGAGCTGGAAGCTGCCTGCAACCCTGCCTGGCCAC...GGACAGTGCAGCTACAGGATATGCCATCATGGCAGAAAGTTCTATTGGTTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255108.8
ENST00000495421.1
CDS-3UTR GCA 90 bp TTCCATCAGCCAAACAACACGCATTACTGGGCATGTGCTGAGCTTGTGCCAGTGCTGAGCTTGTGCCAGTaGCAGGACAGGACAGAGACG +
Preference number: 4 (lower is better)
Translates to: FHQPNNTHYWACAELVPVLSLCQ*QDRTET
Trigger: CGTCTCTGTCCTGTCCTGGCACTGGCACAAGCTCAG...CACTGGCACAAGCTCAGCACATGCCCAGTAATGCGTGTTGTTTGGCTGATGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000527319.1
CDS-3UTR GCA 90 bp AAAATGTATGAGAGCCTGAGCTCCAGCTTGCTCAGCACCCAGCACATCCACGCAAGCTGGTCAGGGAACTaGAAGGCAACACTCCGTCCA +
Preference number: 4 (lower is better)
Translates to: KMYESLSSSLLSTQHIHASWSGN*KATLRP
Trigger: TGGACGGAGTGTTGCCTTGCAGTTCCCTGACCAGCT...TGCGTGGATGTGCTGGGTGCTGAGCAAGCTGGAGCTCAGGCTCTCATACATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476260.1
CDS-3UTR CCA 90 bp CAGATGGGTCCAGAGGCCTCAGGGAAGTCCCTAAGCCCTTTATTCCATCAGCCAGCATCTCCCAATAGCTaGTCAGGGAACTGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: QMGPEASGKSLSPLFHQPASPNS*SGNCKA
Trigger: TGCCTTGCAGTTCCCTGACCAGCTATTGGGAGATGC...TGGCTGATGGAATAAAGGGCTTAGGGACTTCCCTGAGGCCTCTGGACCCATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CCA 90 bp GTGCAGGGAGCACTAAAGGTCCTAGCAGCCATTCATAAGTCCATCTATGTCTCCAGGCGCTTTGGGGTCTaGGTTCTGGGCCTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: VQGALKVLAAIHKSIYVSRRFGV*VLGLKG
Trigger: GCCTTTGAGGCCCAGAACCCAGACCCCAAAGCGCCT...GGAGACATAGATGGACTTATGAATGGCTGCTAGGACCTTTAGTGCTCCCTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
CDS-3UTR CCA 90 bp GGAGCACTAAAGGTCCTAGCAGCCATTCATAAGTCCATCTATGTCTCCAGCCCCGGGGAAAAGCTGGGCTaGAGACTAGCAGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GALKVLAAIHKSIYVSSPGEKLG*RLAGPG
Trigger: ACCTGGACCTGCTAGTCTCCAGCCCAGCTTTTCCCC...GGGGCTGGAGACATAGATGGACTTATGAATGGCTGCTAGGACCTTTAGTGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CCA 90 bp CATCAGCCAAACAACACGCATTACTGGGCATGTGCTGAGCTTGTGCCAGTGCCAACTCAGGGAACCCACTaGTTGGGGAAAAGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: HQPNNTHYWACAELVPVPTQGTH*LGKSWA
Trigger: AGCCCAGCTTTTCCCCAACCAGTGGGTTCCCTGAGT...TGGCACTGGCACAAGCTCAGCACATGCCCAGTAATGCGTGTTGTTTGGCTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255108.8
ENST00000495421.1
CDS-3UTR CCA 90 bp CTAAAGGTCCTAGCAGCCATTCATAAGTCCATCTATGTCTCCAGCCCCACATGGGGAGAAGGGTTGACCTaGTGCCCACCCCAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: LKVLAAIHKSIYVSSPTWGEGLT*CPPQEQ
Trigger: CTGCTCTTGGGGTGGGCACCAGGTCAACCCTTCTCC...CCATGTGGGGCTGGAGACATAGATGGACTTATGAATGGCTGCTAGGACCTTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CCA 90 bp CAGCCAAACAACACGCATTACTGGGCATGTGCTGAGCTTGTGCCAGTGCCAGGAAGTCTTCCCTGTATCTaGACAGCAGGAGGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: QPNNTHYWACAELVPVPGSLPCI*TAGGEG
Trigger: CCCTTCTCCTCCTGCTGTCCAGATACAGGGAAGACT...TCCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAATGCGTGTTGTTTGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255108.8
ENST00000495421.1
CDS-3UTR CCA 90 bp GATGACTTCCAGGCAGGTGGGGGTCGGAGATCTCCAGTAATGAGTGACACGTCTAGTCTTCCCTGTATCTaGACAGCAGGAGGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: DDFQAGGGRRSPVMSDTSSLPCI*TAGGEG
Trigger: CCCTTCTCCTCCTGCTGTCCAGATACAGGGAAGACT...AGACGTGTCACTCATTACTGGAGATCTCCGACCCCCACCTGCCTGGAAGTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CCA 90 bp GCACTAAAGGTCCTAGCAGCCATTCATAAGTCCATCTATGTCTCCAGCCCCACAGTCAGGTTCCGCAAGTaGGCCAGTGCCTCACGGTGT +
Preference number: 4 (lower is better)
Translates to: ALKVLAAIHKSIYVSSPTVRFRK*ASASRC
Trigger: ACACCGTGAGGCACTGGCCCACTTGCGGAACCTGAC...TGTGGGGCTGGAGACATAGATGGACTTATGAATGGCTGCTAGGACCTTTAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255108.8
ENST00000459879.1
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CCA 90 bp TTCATAAGTCCATCTATGTCTCCAGCCCCACATGGTATCAGCCGCTTCCCTCATGTCAGGTTCCGCAAGTaGGCCAGTGCCTCACGGTGT +
Preference number: 4 (lower is better)
Translates to: FISPSMSPAPHGISRFPHVRFRK*ASASRC
Trigger: ACACCGTGAGGCACTGGCCCACTTGCGGAACCTGAC...ATGAGGGAAGCGGCTGATACCATGTGGGGCTGGAGACATAGATGGACTTATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CCA 90 bp GCTGAGCTTGTGCCAGTGCCAGGACAGGACAGAGACGGATCCTATCCTGTGAAGGGTGCCAGTATAGGCTaGAAGAAGCTACCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: AELVPVPGQDRDGSYPVKGASIG*KKLPES
Trigger: GCTTTCTGGTAGCTTCTTCCAGCCTATACTGGCACC...CTTCACAGGATAGGATCCGTCTCTGTCCTGTCCTGGCACTGGCACAAGCTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000459879.1
ENST00000495421.1
CDS-3UTR CCA 90 bp ACACGCATTACTGGGCATGTGCTGAGCTTGTGCCAGTGCCAGGACAGGACAGAGAGCTTCCAGCTCACATaGTGCCAGTATAGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: TRITGHVLSLCQCQDRTESFQLT*CQYRLE
Trigger: TTCCAGCCTATACTGGCACCATGTGAGCTGGAAGCT...CTCTGTCCTGTCCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAATGCGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000459879.1
ENST00000495421.1
CDS-3UTR CCA 90 bp GGCCTTGACACAGAGCTCCAAGGCCACAGAACGTTGACGAAGCACGAAGGCAACAGCTTCCAGCTCACATaGTGCCAGTATAGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: GLDTELQGHRTLTKHEGNSFQLT*CQYRLE
Trigger: TTCCAGCCTATACTGGCACCATGTGAGCTGGAAGCT...GTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTTGGAGCTCTGTGTCAAGGCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495421.1
CDS-3UTR CCA 90 bp AGGTTGGTGCAGGGAGCACTAAAGGTCCTAGCAGCCATTCATAAGTCCATCTATCACAGCTTCTGTCACTaGCGTCTGACCCAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: RLVQGALKVLAAIHKSIYHSFCH*RLTQAG
Trigger: CCCCGCCTGGGTCAGACGCCAGTGACAGAAGCTGTG...ATAGATGGACTTATGAATGGCTGCTAGGACCTTTAGTGCTCCCTGCACCAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000524776.5
ENST00000527319.1
CDS-3UTR CCA 90 bp AGTGCCAGGACAGGACAGAGACGGATCCTATCCTGTGAAGGGCTGCCTGCTCTCAACAACACGCATTACTaGGCATGTGCTGAGCTTGTG +
Preference number: 4 (lower is better)
Translates to: SARTGQRRILSCEGLPALNNTHY*ACAELV
Trigger: CACAAGCTCAGCACATGCCCAGTAATGCGTGTTGTT...GAGAGCAGGCAGCCCTTCACAGGATAGGATCCGTCTCTGTCCTGTCCTGGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000527319.1
CDS-3UTR CCA 90 bp GGAAGACAGATGGGTCCAGAGGCCTCAGGGAAGTCCCTAAGCCCTTTATTCCATCCCTCAACTGCAGCCTaGGAACTGGGATTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: GRQMGPEASGKSLSPLFHPSTAA*ELGLAK
Trigger: TTTGGCCAATCCCAGTTCCCAGGCTGCAGTTGAGGG...ATGGAATAAAGGGCTTAGGGACTTCCCTGAGGCCTCTGGACCCATCTGTCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CCA 90 bp GGGCATGTGCTGAGCTTGTGCCAGTGCCAGGACAGGACAGAGACGGATCCTATCTTTGGTTGTCACAACTaGGGGAGTGCTTCTGATGTC +
Preference number: 4 (lower is better)
Translates to: GHVLSLCQCQDRTETDPIFGCHN*GSASDV
Trigger: GACATCAGAAGCACTCCCCCAGTTGTGACAACCAAA...GATAGGATCCGTCTCTGTCCTGTCCTGGCACTGGCACAAGCTCAGCACATGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
3UTR CAA 72 bp GAGAAACCCTGGTCTAGACTGTCTAGCACCTGCCTTTaGACAAGGACAGACCCTCAACTGCAGCCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: EKPWSRLSSTCL*TRTDPQLQPGN
Trigger: GTTCCCAGGCTGCAGTTGAGGGTCTGTCCTTGTCAAAAGGCAGGTGCTAGACAGTCTAGACCAGGGTTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR TCA 90 bp CAGATGGGTCCAGAGGCCTCAGGGAAGTCCCTAAGCCCTTTATTCCATCAGCCACTGTGTCACCCAGAATaGACATCTTTGACCCTGTCG +
Preference number: 4 (lower is better)
Translates to: QMGPEASGKSLSPLFHQPLCHPE*TSLTLS
Trigger: CGACAGGGTCAAAGATGTTCATTCTGGGTGACACAG...TGGCTGATGGAATAAAGGGCTTAGGGACTTCCCTGAGGCCTCTGGACCCATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR TCA 90 bp AGCCAAACAACACGCATTACTGGGCATGTGCTGAGCTTGTGCCAGTGCCAGGACAAATGTATGAGAGCCTaGGCTCCAGCTTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: SQTTRITGHVLSLCQCQDKCMRA*APACSA
Trigger: TGCTGAGCAAGCTGGAGCTCAGGCTCTCATACATTT...GTCCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAATGCGTGTTGTTTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR TCA 90 bp AAAATGTATGAGAGCCTGAGCTCCAGCTTGCTCAGCACCCAGCACATCCACGCACAGGGCCAAAATGTATaGGAGCCTGAGCTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: KMYESLSSSLLSTQHIHAQGQNV*EPELQL
Trigger: AAGCTGGAGCTCAGGCTCTCATACATTTTGGCCCTG...TGCGTGGATGTGCTGGGTGCTGAGCAAGCTGGAGCTCAGGCTCTCATACATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000532140.1
CDS-3UTR TCA 90 bp AGGTTGGTGCAGGGAGCACTAAAGGTCCTAGCAGCCATTCATAAGTCCATCTATAGTCCGCATAATGTGTaGGGTGGGGAGCCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: RLVQGALKVLAAIHKSIYSPHNV*GGEPGL
Trigger: CAGGCCTGGCTCCCCACCTCACACATTATGCGGACT...ATAGATGGACTTATGAATGGCTGCTAGGACCTTTAGTGCTCCCTGCACCAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255108.8
ENST00000459879.1
ENST00000495421.1
ENST00000524776.5
CDS-3UTR TCA 90 bp TTATTCCATCAGCCAAACAACACGCATTACTGGGCATGTGCTGAGCTTGTGCCAGGTTTCCCACAGCTCTaGCTCAGGTGGTGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: LFHQPNNTHYWACAELVPGFPQL*LRWWES
Trigger: GCTCTCCCACCACCTGAGTCAGAGCTGTGGGAAACC...TGGCACAAGCTCAGCACATGCCCAGTAATGCGTGTTGTTTGGCTGATGGAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000527319.1
CDS-3UTR TCA 90 bp GGGCATGTGCTGAGCTTGTGCCAGTGCCAGGACAGGACAGAGACGGATCCTATCAGAGCCAAGCTTCCATaGTCATTTGATGACTTCCAG +
Preference number: 4 (lower is better)
Translates to: GHVLSLCQCQDRTETDPIRAKLP*SFDDFQ
Trigger: CTGGAAGTCATCAAATGATCATGGAAGCTTGGCTCT...GATAGGATCCGTCTCTGTCCTGTCCTGGCACTGGCACAAGCTCAGCACATGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000527319.1
CDS-3UTR TCA 90 bp GCACCCTACCATACACCAGACAGCCCCACAACAAAGAATTATCTGGCCCCAAATCCGGGAACTAAGGAATaGGGCTGCAGGACTGCTCTC +
Preference number: 4 (lower is better)
Translates to: APYHTPDSPTTKNYLAPNPGTKE*GCRTAL
Trigger: GAGAGCAGTCCTGCAGCCTCATTCCTTAGTTCCCGG...ATTTGGGGCCAGATAATTCTTTGTTGTGGGGCTGTCTGGTGTATGGTAGGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR TCA 90 bp CCAATAGAACTTTCTGCCATGATGGCATATCCTGTAGCTGCACTGTCCCCTCATACGGATCCTATCCTGTaGAGGGCTGCCTGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: PIELSAMMAYPVAALSPHTDPIL*RAACSP
Trigger: GGGAGAGCAGGCAGCCCTTCACAGGATAGGATCCGT...ATGAGGGGACAGTGCAGCTACAGGATATGCCATCATGGCAGAAAGTTCTATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR TCA 90 bp TTGGTGCAGGGAGCACTAAAGGTCCTAGCAGCCATTCATAAGTCCATCTATGTCCTGGGGGAGTGCTTCTaGTGTCTAGTGGGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: LVQGALKVLAAIHKSIYVLGECF*CLVGRG
Trigger: GCCTCTGCCCACTAGACATCAGAAGCACTCCCCCAG...GACATAGATGGACTTATGAATGGCTGCTAGGACCTTTAGTGCTCCCTGCACCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR GCA 90 bp GCCCCAAATGTCAAGTACGAGTTTGAGAAACCCTGGTCTAGACTGTCTAGCACCATGAGGCTGCAGGACTaGTCTCAGCCAGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: APNVKYEFEKPWSRLSSTMRLQD*SQPAPA
Trigger: AGCTGGAGCTGGCTGAGAGCAGTCCTGCAGCCTCAT...GGTGCTAGACAGTCTAGACCAGGGTTTCTCAAACTCGTACTTGACATTTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR GCA 90 bp GCACCCTACCATACACCAGACAGCCCCACAACAAAGAATTATCTGGCCCCAAATCCAAAGGTCCTGGGCTaGCCTCAGGAAGACAGATGG +
Preference number: 4 (lower is better)
Translates to: APYHTPDSPTTKNYLAPNPKVLG*PQEDRW
Trigger: CCATCTGTCTTCCTGAGGGCAGCCCAGGACCTTTGG...ATTTGGGGCCAGATAATTCTTTGTTGTGGGGCTGTCTGGTGTATGGTAGGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR GCA 90 bp ACACGCATTACTGGGCATGTGCTGAGCTTGTGCCAGTGCCAGGACAGGACAGAGAGACTGTCTAGCACCTaGCTTTTGACAAGGACAGAC +
Preference number: 4 (lower is better)
Translates to: TRITGHVLSLCQCQDRTERLSST*LLTRTD
Trigger: GTCTGTCCTTGTCAAAAGGCAGGTGCTAGACAGTCT...CTCTGTCCTGTCCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAATGCGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR GCA 90 bp TGTGCTGAGCTTGTGCCAGTGCCAGGACAGGACAGAGACGGATCCTATCCTGTGAGACTGTCTAGCACCTaGCTTTTGACAAGGACAGAC +
Preference number: 4 (lower is better)
Translates to: CAELVPVPGQDRDGSYPVRLSST*LLTRTD
Trigger: GTCTGTCCTTGTCAAAAGGCAGGTGCTAGACAGTCT...CACAGGATAGGATCCGTCTCTGTCCTGTCCTGGCACTGGCACAAGCTCAGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR GCA 90 bp TTGACCTGGTGCCCACCCCAAGAGCAGCCGACTCAGGTCTGGGTCAAGGTCTGGACCAATAGAACTTTCTaGCATGATGGCATATCCTGT +
Preference number: 4 (lower is better)
Translates to: LTWCPPQEQPTQVWVKVWTNRTF*HDGISC
Trigger: ACAGGATATGCCATCATGGCAGAAAGTTCTATTGGT...CCAGACCTTGACCCAGACCTGAGTCGGCTGCTCTTGGGGTGGGCACCAGGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495421.1
CDS-3UTR CCA 90 bp AAACCCTGGTCTAGACTGTCTAGCACCTGCCTTTTGACAAGGACAGACCCTCAAGGGGAAAAGCTGGGCTaGAGACTAGCAGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: KPWSRLSSTCLLTRTDPQGEKLG*RLAGPG
Trigger: ACCTGGACCTGCTAGTCTCCAGCCCAGCTTTTCCCC...TTGAGGGTCTGTCCTTGTCAAAAGGCAGGTGCTAGACAGTCTAGACCAGGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255108.8
ENST00000495421.1
CDS-3UTR CCA 90 bp CCAATAGAACTTTCTGCCATGATGGCATATCCTGTAGCTGCACTGTCCCCTCATCAGCCGACTCAGGTCTaGGTCAAGGTCTGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: PIELSAMMAYPVAALSPHQPTQV*VKVWVR
Trigger: CCTGACCCAGACCTTGACCCAGACCTGAGTCGGCTG...ATGAGGGGACAGTGCAGCTACAGGATATGCCATCATGGCAGAAAGTTCTATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255108.8
ENST00000495421.1
CDS-3UTR CCA 90 bp AAACCCTGGTCTAGACTGTCTAGCACCTGCCTTTTGACAAGGACAGACCCTCAACCACGCGGGCATCTCTaGCCCTCTCTACCAGATATC +
Preference number: 4 (lower is better)
Translates to: KPWSRLSSTCLLTRTDPQPRGHL*PSLPDI
Trigger: GATATCTGGTAGAGAGGGCCAGAGATGCCCGCGTGG...TTGAGGGTCTGTCCTTGTCAAAAGGCAGGTGCTAGACAGTCTAGACCAGGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255108.8
ENST00000495421.1
CDS-3UTR CCA 90 bp AGAGCACCCAGAGGACAGGCTAATAGCACAAAGACATCCACCTCAGGGAAGTTGAAGCTACCAGAAAGCTaGGGGGCTAGAGCACCCAGA +
Preference number: 4 (lower is better)
Translates to: RAPRGQANSTKTSTSGKLKLPES*GARAPR
Trigger: TCTGGGTGCTCTAGCCCCCCAGCTTTCTGGTAGCTT...CAACTTCCCTGAGGTGGATGTCTTTGTGCTATTAGCCTGTCCTCTGGGTGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CCA 90 bp AGCCAAACAACACGCATTACTGGGCATGTGCTGAGCTTGTGCCAGTGCCAGGACGGTGCCAGTATAGGCTaGAAGAAGCTACCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: SQTTRITGHVLSLCQCQDGASIG*KKLPES
Trigger: GCTTTCTGGTAGCTTCTTCCAGCCTATACTGGCACC...GTCCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAATGCGTGTTGTTTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000459879.1
ENST00000495421.1
CDS-3UTR CCA 90 bp CCAAACAACACGCATTACTGGGCATGTGCTGAGCTTGTGCCAGTGCCAGGACAGGGTGCCAGTATAGGCTaGAAGAAGCTACCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: PNNTHYWACAELVPVPGQGASIG*KKLPES
Trigger: GCTTTCTGGTAGCTTCTTCCAGCCTATACTGGCACC...CTGTCCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAATGCGTGTTGTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000459879.1
ENST00000495421.1
CDS-3UTR CCA 90 bp TCAGCCGCTTCCCTCATCCTCATAGGCGATGGCAATCCCTCGTCTTCCACTCACAACAACACGCATTACTaGGCATGTGCTGAGCTTGTG +
Preference number: 4 (lower is better)
Translates to: SAASLILIGDGNPSSSTHNNTHY*ACAELV
Trigger: CACAAGCTCAGCACATGCCCAGTAATGCGTGTTGTT...GTGAGTGGAAGACGAGGGATTGCCATCGCCTATGAGGATGAGGGAAGCGGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000527319.1
CDS-3UTR CCA 90 bp TGTGCTGAGCTTGTGCCAGTGCCAGGACAGGACAGAGACGGATCCTATCCTGTGGAGTTTGAGAAACCCTaGTCTAGACTGTCTAGCACC +
Preference number: 4 (lower is better)
Translates to: CAELVPVPGQDRDGSYPVEFEKP*SRLSST
Trigger: GGTGCTAGACAGTCTAGACCAGGGTTTCTCAAACTC...CACAGGATAGGATCCGTCTCTGTCCTGTCCTGGCACTGGCACAAGCTCAGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CCA 90 bp GTTGTCACAACTGGGGGAGTGCTTCTGATGTCTAGTGGGCAGAGGCCAGGGATGTTTGGTTGTCACAACTaGGGGAGTGCTTCTGATGTC +
Preference number: 4 (lower is better)
Translates to: VVTTGGVLLMSSGQRPGMFGCHN*GSASDV
Trigger: GACATCAGAAGCACTCCCCCAGTTGTGACAACCAAA...CATCCCTGGCCTCTGCCCACTAGACATCAGAAGCACTCCCCCAGTTGTGACAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CCA 90 bp AGCCCCCTACATAGAAGGCACCATACTCTTCTAGACGCCTCCCTGGGGCAAGGGGTCTGGAGATATTTTTaGTTGTCACAACTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: SPLHRRHHTLLDASLGQGVWRYF*LSQLGE
Trigger: CTCCCCCAGTTGTGACAACCAAAAATATCTCCAGAC...CCCTTGCCCCAGGGAGGCGTCTAGAAGAGTATGGTGCCTTCTATGTAGGGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENST00000495421.1
CDS-3UTR TCA 90 bp CATCAGCCAAACAACACGCATTACTGGGCATGTGCTGAGCTTGTGCCAGTGCCACTGTGTCACCCAGAATaGACATCTTTGACCCTGTCG +
Preference number: 4 (lower is better)
Translates to: HQPNNTHYWACAELVPVPLCHPE*TSLTLS
Trigger: CGACAGGGTCAAAGATGTTCATTCTGGGTGACACAG...TGGCACTGGCACAAGCTCAGCACATGCCCAGTAATGCGTGTTGTTTGGCTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR TCA 90 bp CATTACTGGGCATGTGCTGAGCTTGTGCCAGTGCCAGGACAGGACAGAGACGGAAGAGCCAAGCTTCCATaGTCATTTGATGACTTCCAG +
Preference number: 4 (lower is better)
Translates to: HYWACAELVPVPGQDRDGRAKLP*SFDDFQ
Trigger: CTGGAAGTCATCAAATGATCATGGAAGCTTGGCTCT...TCCGTCTCTGTCCTGTCCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000527319.1
CDS-3UTR TCA 90 bp AGGTTGGTGCAGGGAGCACTAAAGGTCCTAGCAGCCATTCATAAGTCCATCTATTTACTGGGCATGTGCTaGGCTTGTGCCAGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: RLVQGALKVLAAIHKSIYLLGMC*ACASAR
Trigger: CCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAA...ATAGATGGACTTATGAATGGCTGCTAGGACCTTTAGTGCTCCCTGCACCAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000527319.1
CDS-3UTR GCA 90 bp ATAAGTCCATCTATGTCTCCAGCCCCACATGGTATCAGCCGCTTCCCTCATCCTAGCTGGTCAGGGAACTaGAAGGCAACTCGTTCACAC +
Preference number: 4 (lower is better)
Translates to: ISPSMSPAPHGISRFPHPSWSGN*KATRSH
Trigger: GTGTGAACGAGTTGCCTTGCAGTTCCCTGACCAGCT...AGGATGAGGGAAGCGGCTGATACCATGTGGGGCTGGAGACATAGATGGACTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524776.5
CDS-3UTR GCA 90 bp CAGCCAAACAACACGCATTACTGGGCATGTGCTGAGCTTGTGCCAGTGCCAGGATTCCAGCTCACATGGTaGCAGTATAGGCTGGAAGAA +
Preference number: 4 (lower is better)
Translates to: QPNNTHYWACAELVPVPGFQLTW*QYRLEE
Trigger: TTCTTCCAGCCTATACTGGCACCATGTGAGCTGGAA...TCCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAATGCGTGTTGTTTGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000459879.1
ENST00000495421.1
CDS-3UTR GCA 90 bp AGGTTGGTGCAGGGAGCACTAAAGGTCCTAGCAGCCATTCATAAGTCCATCTATATGAGGCTGCAGGACTaGTCTCAGCCAGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: RLVQGALKVLAAIHKSIYMRLQD*SQPAPA
Trigger: AGCTGGAGCTGGCTGAGAGCAGTCCTGCAGCCTCAT...ATAGATGGACTTATGAATGGCTGCTAGGACCTTTAGTGCTCCCTGCACCAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000524776.5
ENST00000527319.1
CDS-3UTR GCA 90 bp TTATTCCATCAGCCAAACAACACGCATTACTGGGCATGTGCTGAGCTTGTGCCAATGAGGCTGCAGGACTaGTCTCAGCCAGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LFHQPNNTHYWACAELVPMRLQD*SQPAPA
Trigger: AGCTGGAGCTGGCTGAGAGCAGTCCTGCAGCCTCAT...TGGCACAAGCTCAGCACATGCCCAGTAATGCGTGTTGTTTGGCTGATGGAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000527319.1
CDS-3UTR GCA 90 bp ACAGACCCTCAACTGCAGCCTGGGAACTGGGATTGGCCAAAGGTCCTGGGCTGCCCCACAGATAACATTTaGCAAGGTCTGGAGATATTT +
Preference number: 4 (lower is better)
Translates to: TDPQLQPGNWDWPKVLGCPTDNI*QGLEIF
Trigger: AAATATCTCCAGACCTTGGCAAATGTTATCTGTGGG...GCAGCCCAGGACCTTTGGCCAATCCCAGTTCCCAGGCTGCAGTTGAGGGTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR GCA 90 bp GTGCCAGTGCCAGGACAGGACAGAGACGGATCCTATCCTGTGAAGGGCTGCCTGCCCACAGATAACATTTaGCAAGGTCTGGAGATATTT +
Preference number: 4 (lower is better)
Translates to: VPVPGQDRDGSYPVKGCLPTDNI*QGLEIF
Trigger: AAATATCTCCAGACCTTGGCAAATGTTATCTGTGGG...CAGGCAGCCCTTCACAGGATAGGATCCGTCTCTGTCCTGTCCTGGCACTGGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CCA 90 bp AAACCCTGGTCTAGACTGTCTAGCACCTGCCTTTTGACAAGGACAGACCCTCAATTGGGGTCTGGGTTCTaGGCCTCAAAGGCCTTGACA +
Preference number: 4 (lower is better)
Translates to: KPWSRLSSTCLLTRTDPQLGSGF*ASKALT
Trigger: TGTCAAGGCCTTTGAGGCCCAGAACCCAGACCCCAA...TTGAGGGTCTGTCCTTGTCAAAAGGCAGGTGCTAGACAGTCTAGACCAGGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CCA 90 bp TTGGTGCAGGGAGCACTAAAGGTCCTAGCAGCCATTCATAAGTCCATCTATGTCCCACGCGGGCATCTCTaGCCCTCTCTACCAGATATC +
Preference number: 4 (lower is better)
Translates to: LVQGALKVLAAIHKSIYVPRGHL*PSLPDI
Trigger: GATATCTGGTAGAGAGGGCCAGAGATGCCCGCGTGG...GACATAGATGGACTTATGAATGGCTGCTAGGACCTTTAGTGCTCCCTGCACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255108.8
ENST00000459879.1
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CCA 90 bp TTCATAAGTCCATCTATGTCTCCAGCCCCACATGGTATCAGCCGCTTCCCTCATAAGCTACCAGAAAGCTaGGGGGCTAGAGCACCCAGA +
Preference number: 4 (lower is better)
Translates to: FISPSMSPAPHGISRFPHKLPES*GARAPR
Trigger: TCTGGGTGCTCTAGCCCCCCAGCTTTCTGGTAGCTT...ATGAGGGAAGCGGCTGATACCATGTGGGGCTGGAGACATAGATGGACTTATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CCA 90 bp GAGCACCCTACCATACACCAGACAGCCCCACAACAAAGAATTATCTGGCCCCAACATCCTCATAGGCGATaGCAATCCCTCGTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: EHPTIHQTAPQQRIIWPQHPHRR*QSLVFH
Trigger: GTGGAAGACGAGGGATTGCCATCGCCTATGAGGATG...TTGGGGCCAGATAATTCTTTGTTGTGGGGCTGTCTGGTGTATGGTAGGGTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CCA 90 bp GGGGATGGGAGGTTGGTGCAGGGAGCACTAAAGGTCCTAGCAGCCATTCATAAGAACAACACGCATTACTaGGCATGTGCTGAGCTTGTG +
Preference number: 4 (lower is better)
Translates to: GDGRLVQGALKVLAAIHKNNTHY*ACAELV
Trigger: CACAAGCTCAGCACATGCCCAGTAATGCGTGTTGTT...CTTATGAATGGCTGCTAGGACCTTTAGTGCTCCCTGCACCAACCTCCCATCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000527319.1
CDS-3UTR CCA 90 bp CAGATGGGTCCAGAGGCCTCAGGGAAGTCCCTAAGCCCTTTATTCCATCAGCCAGAGTTTGAGAAACCCTaGTCTAGACTGTCTAGCACC +
Preference number: 4 (lower is better)
Translates to: QMGPEASGKSLSPLFHQPEFEKP*SRLSST
Trigger: GGTGCTAGACAGTCTAGACCAGGGTTTCTCAAACTC...TGGCTGATGGAATAAAGGGCTTAGGGACTTCCCTGAGGCCTCTGGACCCATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR TCA 90 bp GAGCACCCTACCATACACCAGACAGCCCCACAACAAAGAATTATCTGGCCCCAACAGAATGAACATCTTTaGCCCTGTCGTCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: EHPTIHQTAPQQRIIWPQQNEHL*PCRLLQ
Trigger: CTGGAGGAGACGACAGGGTCAAAGATGTTCATTCTG...TTGGGGCCAGATAATTCTTTGTTGTGGGGCTGTCTGGTGTATGGTAGGGTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR TCA 90 bp GGAGCACTAAAGGTCCTAGCAGCCATTCATAAGTCCATCTATGTCTCCAGCCCCATCTCCAGTAATGAGTaGCACGTCTGGGGTTTCCCA +
Preference number: 4 (lower is better)
Translates to: GALKVLAAIHKSIYVSSPISSNE*HVWGFP
Trigger: TGGGAAACCCCAGACGTGTCACTCATTACTGGAGAT...GGGGCTGGAGACATAGATGGACTTATGAATGGCTGCTAGGACCTTTAGTGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000524776.5
ENST00000527319.1
CDS-3UTR TCA 90 bp CTAGCAGCCATTCATAAGTCCATCTATGTCTCCAGCCCCACATGGTATCAGCCGATCTCCAGTAATGAGTaGCACGTCTGGGGTTTCCCA +
Preference number: 4 (lower is better)
Translates to: LAAIHKSIYVSSPTWYQPISSNE*HVWGFP
Trigger: TGGGAAACCCCAGACGTGTCACTCATTACTGGAGAT...CGGCTGATACCATGTGGGGCTGGAGACATAGATGGACTTATGAATGGCTGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000495421.1
ENST00000524776.5
ENST00000527319.1
CDS-3UTR TCA 90 bp GGGGATGGGAGGTTGGTGCAGGGAGCACTAAAGGTCCTAGCAGCCATTCATAAGAGAGCCAAGCTTCCATaGTCATTTGATGACTTCCAG +
Preference number: 4 (lower is better)
Translates to: GDGRLVQGALKVLAAIHKRAKLP*SFDDFQ
Trigger: CTGGAAGTCATCAAATGATCATGGAAGCTTGGCTCT...CTTATGAATGGCTGCTAGGACCTTTAGTGCTCCCTGCACCAACCTCCCATCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000524776.5
ENST00000527319.1
CDS-3UTR GCA 90 bp CTAAAGGTCCTAGCAGCCATTCATAAGTCCATCTATGTCTCCAGCCCCACATGGACACATAGCTACGCTTaGCAGCAGCCTGAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: LKVLAAIHKSIYVSSPTWTHSYA*QQPESG
Trigger: ACCTGACTCAGGCTGCTGGCAAGCGTAGCTATGTGT...CCATGTGGGGCTGGAGACATAGATGGACTTATGAATGGCTGCTAGGACCTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255108.8
ENST00000459879.1
ENST00000495421.1
ENST00000524776.5
CDS-3UTR GCA 90 bp TTGGTGCAGGGAGCACTAAAGGTCCTAGCAGCCATTCATAAGTCCATCTATGTCAGCTGGTCAGGGAACTaGAAGGCAACACTCCGTCCA +
Preference number: 4 (lower is better)
Translates to: LVQGALKVLAAIHKSIYVSWSGN*KATLRP
Trigger: TGGACGGAGTGTTGCCTTGCAGTTCCCTGACCAGCT...GACATAGATGGACTTATGAATGGCTGCTAGGACCTTTAGTGCTCCCTGCACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495421.1
CDS-3UTR CCA 90 bp CTGGCCCCAAATGTCAAGTACGAGTTTGAGAAACCCTGGTCTAGACTGTCTAGCGCATCTCCCAATAGCTaGTCAGGGAACTGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: LAPNVKYEFEKPWSRLSSASPNS*SGNCKA
Trigger: TGCCTTGCAGTTCCCTGACCAGCTATTGGGAGATGC...GCTAGACAGTCTAGACCAGGGTTTCTCAAACTCGTACTTGACATTTGGGGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CCA 90 bp GTGCAGGGAGCACTAAAGGTCCTAGCAGCCATTCATAAGTCCATCTATGTCTCCGCATCTCCCAATAGCTaGTCAGGGAACTGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: VQGALKVLAAIHKSIYVSASPNS*SGNCKA
Trigger: TGCCTTGCAGTTCCCTGACCAGCTATTGGGAGATGC...GGAGACATAGATGGACTTATGAATGGCTGCTAGGACCTTTAGTGCTCCCTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CCA 90 bp TTGGTGCAGGGAGCACTAAAGGTCCTAGCAGCCATTCATAAGTCCATCTATGTCTTGGGGTCTGGGTTCTaGGCCTCAAAGGCCTTGACA +
Preference number: 4 (lower is better)
Translates to: LVQGALKVLAAIHKSIYVLGSGF*ASKALT
Trigger: TGTCAAGGCCTTTGAGGCCCAGAACCCAGACCCCAA...GACATAGATGGACTTATGAATGGCTGCTAGGACCTTTAGTGCTCCCTGCACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CCA 90 bp ATAGACCAACGCTGTCCAACCAATAGAACTTTCTGCCATGATGGCATATCCTGTCAGGTCCAGGTACCGTaGGCGCAGGAGAGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: IDQRCPTNRTFCHDGISCQVQVP*AQESSQ
Trigger: TTGGCTACTCTCCTGCGCCCACGGTACCTGGACCTG...ACAGGATATGCCATCATGGCAGAAAGTTCTATTGGTTGGACAGCGTTGGTCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255108.8
ENST00000495421.1
CDS-3UTR CCA 90 bp TTGGTGCAGGGAGCACTAAAGGTCCTAGCAGCCATTCATAAGTCCATCTATGTCAAGCTACCAGAAAGCTaGGGGGCTAGAGCACCCAGA +
Preference number: 4 (lower is better)
Translates to: LVQGALKVLAAIHKSIYVKLPES*GARAPR
Trigger: TCTGGGTGCTCTAGCCCCCCAGCTTTCTGGTAGCTT...GACATAGATGGACTTATGAATGGCTGCTAGGACCTTTAGTGCTCCCTGCACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255108.8
ENST00000459879.1
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CCA 90 bp CCAATAGAACTTTCTGCCATGATGGCATATCCTGTAGCTGCACTGTCCCCTCATCCCTCAACTGCAGCCTaGGAACTGGGATTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: PIELSAMMAYPVAALSPHPSTAA*ELGLAK
Trigger: TTTGGCCAATCCCAGTTCCCAGGCTGCAGTTGAGGG...ATGAGGGGACAGTGCAGCTACAGGATATGCCATCATGGCAGAAAGTTCTATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CCA 90 bp GGAAGACAGATGGGTCCAGAGGCCTCAGGGAAGTCCCTAAGCCCTTTATTCCATGAGTTTGAGAAACCCTaGTCTAGACTGTCTAGCACC +
Preference number: 4 (lower is better)
Translates to: GRQMGPEASGKSLSPLFHEFEKP*SRLSST
Trigger: GGTGCTAGACAGTCTAGACCAGGGTTTCTCAAACTC...ATGGAATAAAGGGCTTAGGGACTTCCCTGAGGCCTCTGGACCCATCTGTCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CCA 90 bp TGGGCTGCCCTCAGGAAGACAGATGGGTCCAGAGGCCTCAGGGAAGTCCCTAAGACATTTGCCAAGGTCTaGAGATATTTTTGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: WAALRKTDGSRGLREVPKTFAKV*RYFWLS
Trigger: TGACAACCAAAAATATCTCCAGACCTTGGCAAATGT...CTTAGGGACTTCCCTGAGGCCTCTGGACCCATCTGTCTTCCTGAGGGCAGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR TCA 90 bp GCCCCAAATGTCAAGTACGAGTTTGAGAAACCCTGGTCTAGACTGTCTAGCACCAAATGTATGAGAGCCTaGGCTCCAGCTTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: APNVKYEFEKPWSRLSSTKCMRA*APACSA
Trigger: TGCTGAGCAAGCTGGAGCTCAGGCTCTCATACATTT...GGTGCTAGACAGTCTAGACCAGGGTTTCTCAAACTCGTACTTGACATTTGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR TCA 90 bp ACCAATAGAACTTTCTGCCATGATGGCATATCCTGTAGCTGCACTGTCCCCTCACAGGGCCAAAATGTATaGGAGCCTGAGCTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: TNRTFCHDGISCSCTVPSQGQNV*EPELQL
Trigger: AAGCTGGAGCTCAGGCTCTCATACATTTTGGCCCTG...TGAGGGGACAGTGCAGCTACAGGATATGCCATCATGGCAGAAAGTTCTATTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR TCA 90 bp GTGCAGGGAGCACTAAAGGTCCTAGCAGCCATTCATAAGTCCATCTATGTCTCCATCTCCAGTAATGAGTaGCACGTCTGGGGTTTCCCA +
Preference number: 4 (lower is better)
Translates to: VQGALKVLAAIHKSIYVSISSNE*HVWGFP
Trigger: TGGGAAACCCCAGACGTGTCACTCATTACTGGAGAT...GGAGACATAGATGGACTTATGAATGGCTGCTAGGACCTTTAGTGCTCCCTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000524776.5
ENST00000527319.1
CDS-3UTR TCA 90 bp GTCCAACCAATAGAACTTTCTGCCATGATGGCATATCCTGTAGCTGCACTGTCCCTAGCACCTGCCTTTTaGCAAGGACAGACCCTCAAC +
Preference number: 4 (lower is better)
Translates to: VQPIELSAMMAYPVAALSLAPAF*QGQTLN
Trigger: GTTGAGGGTCTGTCCTTGTCAAAAGGCAGGTGCTAG...GGACAGTGCAGCTACAGGATATGCCATCATGGCAGAAAGTTCTATTGGTTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR GCA 90 bp TTCCATCAGCCAAACAACACGCATTACTGGGCATGTGCTGAGCTTGTGCCAGTGTTCCAGCTCACATGGTaGCAGTATAGGCTGGAAGAA +
Preference number: 4 (lower is better)
Translates to: FHQPNNTHYWACAELVPVFQLTW*QYRLEE
Trigger: TTCTTCCAGCCTATACTGGCACCATGTGAGCTGGAA...CACTGGCACAAGCTCAGCACATGCCCAGTAATGCGTGTTGTTTGGCTGATGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000459879.1
ENST00000495421.1
CDS-3UTR GCA 90 bp CATTACTGGGCATGTGCTGAGCTTGTGCCAGTGCCAGGACAGGACAGAGACGGACTGGTTTATTTAGGTTaGTGTGATCTCCCTGAGAAA +
Preference number: 4 (lower is better)
Translates to: HYWACAELVPVPGQDRDGLVYLG*CDLPEK
Trigger: TTTCTCAGGGAGATCACAGCAACCTAAATAAACCAG...TCCGTCTCTGTCCTGTCCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255108.8
ENST00000495421.1
CDS-3UTR CCA 90 bp GTGCAGGGAGCACTAAAGGTCCTAGCAGCCATTCATAAGTCCATCTATGTCTCCAGCTTCCAGCTCACATaGTGCCAGTATAGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: VQGALKVLAAIHKSIYVSSFQLT*CQYRLE
Trigger: TTCCAGCCTATACTGGCACCATGTGAGCTGGAAGCT...GGAGACATAGATGGACTTATGAATGGCTGCTAGGACCTTTAGTGCTCCCTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255108.8
ENST00000459879.1
ENST00000495421.1
ENST00000524776.5
CDS-3UTR TCA 90 bp GTCCAACCAATAGAACTTTCTGCCATGATGGCATATCCTGTAGCTGCACTGTCCCTGTGTCACCCAGAATaGACATCTTTGACCCTGTCG +
Preference number: 4 (lower is better)
Translates to: VQPIELSAMMAYPVAALSLCHPE*TSLTLS
Trigger: CGACAGGGTCAAAGATGTTCATTCTGGGTGACACAG...GGACAGTGCAGCTACAGGATATGCCATCATGGCAGAAAGTTCTATTGGTTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR TCA 90 bp GTCCAACCAATAGAACTTTCTGCCATGATGGCATATCCTGTAGCTGCACTGTCCATCTCCAGTAATGAGTaGCACGTCTGGGGTTTCCCA +
Preference number: 4 (lower is better)
Translates to: VQPIELSAMMAYPVAALSISSNE*HVWGFP
Trigger: TGGGAAACCCCAGACGTGTCACTCATTACTGGAGAT...GGACAGTGCAGCTACAGGATATGCCATCATGGCAGAAAGTTCTATTGGTTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR TCA 90 bp CCAGAGGACAGGCTAATAGCACAAAGACATCCACCTCAGGGAAGTTGGCAAGCTAGAGCCAAGCTTCCATaGTCATTTGATGACTTCCAG +
Preference number: 4 (lower is better)
Translates to: PEDRLIAQRHPPQGSWQARAKLP*SFDDFQ
Trigger: CTGGAAGTCATCAAATGATCATGGAAGCTTGGCTCT...AGCTTGCCAACTTCCCTGAGGTGGATGTCTTTGTGCTATTAGCCTGTCCTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CCA 90 bp ATTCATAAGTCCATCTATGTCTCCAGCCCCACATGGTATCAGCCGCTTCCCTCAAACAACACGCATTACTaGGCATGTGCTGAGCTTGTG +
Preference number: 4 (lower is better)
Translates to: IHKSIYVSSPTWYQPLPSNNTHY*ACAELV
Trigger: CACAAGCTCAGCACATGCCCAGTAATGCGTGTTGTT...TGAGGGAAGCGGCTGATACCATGTGGGGCTGGAGACATAGATGGACTTATGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000527319.1
CDS-3UTR CCA 90 bp GAGCACCCTACCATACACCAGACAGCCCCACAACAAAGAATTATCTGGCCCCAAGTCTGGAGATATTTTTaGTTGTCACAACTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: EHPTIHQTAPQQRIIWPQVWRYF*LSQLGE
Trigger: CTCCCCCAGTTGTGACAACCAAAAATATCTCCAGAC...TTGGGGCCAGATAATTCTTTGTTGTGGGGCTGTCTGGTGTATGGTAGGGTGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CCA 90 bp AGGCGATGGCAATCCCTCGTCTTCCACTCACAGCTTCTGTCACTGGCGTCTGACACATTTGCCAAGGTCTaGAGATATTTTTGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: RRWQSLVFHSQLLSLASDTFAKV*RYFWLS
Trigger: TGACAACCAAAAATATCTCCAGACCTTGGCAAATGT...GTCAGACGCCAGTGACAGAAGCTGTGAGTGGAAGACGAGGGATTGCCATCGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495421.1
CDS-3UTR GCA 90 bp ATAGACCAACGCTGTCCAACCAATAGAACTTTCTGCCATGATGGCATATCCTGTAGCTGGTCAGGGAACTaGAAGGCAACTCGTTCACAC +
Preference number: 4 (lower is better)
Translates to: IDQRCPTNRTFCHDGISCSWSGN*KATRSH
Trigger: GTGTGAACGAGTTGCCTTGCAGTTCCCTGACCAGCT...ACAGGATATGCCATCATGGCAGAAAGTTCTATTGGTTGGACAGCGTTGGTCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255108.8
ENST00000396758.6
CDS-3UTR GCA 90 bp AGGTTGGTGCAGGGAGCACTAAAGGTCCTAGCAGCCATTCATAAGTCCATCTATTTCCAGCTCACATGGTaGCAGTATAGGCTGGAAGAA +
Preference number: 4 (lower is better)
Translates to: RLVQGALKVLAAIHKSIYFQLTW*QYRLEE
Trigger: TTCTTCCAGCCTATACTGGCACCATGTGAGCTGGAA...ATAGATGGACTTATGAATGGCTGCTAGGACCTTTAGTGCTCCCTGCACCAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255108.8
ENST00000459879.1
ENST00000495421.1
ENST00000524776.5
CDS-3UTR GCA 90 bp GCTGAGCACCCTACCATACACCAGACAGCCCCACAACAAAGAATTATCTGGCCCACCAATAGAACTTTCTaGCATGATGGCATATCCTGT +
Preference number: 4 (lower is better)
Translates to: AEHPTIHQTAPQQRIIWPTNRTF*HDGISC
Trigger: ACAGGATATGCCATCATGGCAGAAAGTTCTATTGGT...GGGCCAGATAATTCTTTGTTGTGGGGCTGTCTGGTGTATGGTAGGGTGCTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CCA 90 bp GCTGTCCAACCAATAGAACTTTCTGCCATGATGGCATATCCTGTAGCTGCACTGGTCTGGAGATATTTTTaGTTGTCACAACTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: AVQPIELSAMMAYPVAALVWRYF*LSQLGE
Trigger: CTCCCCCAGTTGTGACAACCAAAAATATCTCCAGAC...CAGTGCAGCTACAGGATATGCCATCATGGCAGAAAGTTCTATTGGTTGGACAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
3UTR CAA 72 bp CAAAGAATTATCTGGCCCCAAATGTCAAGTACGAGTTaGAGAAACCCTGGTCTAGACTGTCTAGCACCTGCC +
Preference number: 4 (lower is better)
Translates to: QRIIWPQMSSTS*RNPGLDCLAPA
Trigger: GGCAGGTGCTAGACAGTCTAGACCAGGGTTTCTCAAACTCGTACTTGACATTTGGGGCCAGATAATTCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CCA 90 bp ATAGACCAACGCTGTCCAACCAATAGAACTTTCTGCCATGATGGCATATCCTGTTTTGGTTGTCACAACTaGGGGAGTGCTTCTGATGTC +
Preference number: 4 (lower is better)
Translates to: IDQRCPTNRTFCHDGISCFGCHN*GSASDV
Trigger: GACATCAGAAGCACTCCCCCAGTTGTGACAACCAAA...ACAGGATATGCCATCATGGCAGAAAGTTCTATTGGTTGGACAGCGTTGGTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR GCA 90 bp AGGTTGGTGCAGGGAGCACTAAAGGTCCTAGCAGCCATTCATAAGTCCATCTATACCAATAGAACTTTCTaGCATGATGGCATATCCTGT +
Preference number: 4 (lower is better)
Translates to: RLVQGALKVLAAIHKSIYTNRTF*HDGISC
Trigger: ACAGGATATGCCATCATGGCAGAAAGTTCTATTGGT...ATAGATGGACTTATGAATGGCTGCTAGGACCTTTAGTGCTCCCTGCACCAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CCA 90 bp GTCCAACCAATAGAACTTTCTGCCATGATGGCATATCCTGTAGCTGCACTGTCCACATTTGCCAAGGTCTaGAGATATTTTTGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: VQPIELSAMMAYPVAALSTFAKV*RYFWLS
Trigger: TGACAACCAAAAATATCTCCAGACCTTGGCAAATGT...GGACAGTGCAGCTACAGGATATGCCATCATGGCAGAAAGTTCTATTGGTTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR GCA 90 bp ATAGACCAACGCTGTCCAACCAATAGAACTTTCTGCCATGATGGCATATCCTGTCTGGTTTATTTAGGTTaGTGTGATCTCCCTGAGAAA +
Preference number: 4 (lower is better)
Translates to: IDQRCPTNRTFCHDGISCLVYLG*CDLPEK
Trigger: TTTCTCAGGGAGATCACAGCAACCTAAATAAACCAG...ACAGGATATGCCATCATGGCAGAAAGTTCTATTGGTTGGACAGCGTTGGTCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255108.8
ENST00000495421.1
CDS-3UTR CAA 90 bp ACTCACAGCTTCTGTCACTGGCGTCTGACCCAGGCGGGGCTCCAGCCCTTGCCAGCGGGGCTCCAGCCCTaGCCAGCTCCGGGAACTAAG +
Preference number: 5 (lower is better)
Translates to: THSFCHWRLTQAGLQPLPAGLQP*PAPGTK
Trigger: CTTAGTTCCCGGAGCTGGCAAGGGCTGGAGCCCCGC...TGGCAAGGGCTGGAGCCCCGCCTGGGTCAGACGCCAGTGACAGAAGCTGTGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000495421.1
ENST00000524776.5
ENST00000527319.1
CDS CCA 90 bp CTCGGCAGGGCTGCTAAACATCGACTCCATGAGGCACAGCTTGGGTaGTGGGATGCAGCGGGGACCTCCCTGGGACAGCTTCGGGGCCTG +
Preference number: 5 (lower is better)
Translates to: LGRAAKHRLHEAQLG*WDAAGTSLGQLRGL
Trigger: CAGGCCCCGAAGCTGTCCCAGGGAGGTCCCCGCTGCATCCCACCACCCAAGCTGTGCCTCATGGAGTCGATGTTTAGCAGCCCTGCCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000471934.1
ENST00000476260.1
ENST00000477294.5
ENST00000490861.5
ENST00000492306.5
ENST00000495421.1
ENST00000524776.5
ENST00000527567.1
ENST00000529729.1
ENST00000530988.1
ENST00000532140.1
ENST00000534786.1
CDS-3UTR CAA 90 bp AGGTACCGTGGGCGCAGGAGAGTAGCCAAAGCCTCCAGGGCATGGGCACAGGCCTCCATGAGGCACAGCTaGGGTGGTGGGATGCAGCGG +
Preference number: 5 (lower is better)
Translates to: RYRGRRRVAKASRAWAQASMRHS*GGGMQR
Trigger: CCGCTGCATCCCACCACCCAAGCTGTGCCTCATGGA...GGCCTGTGCCCATGCCCTGGAGGCTTTGGCTACTCTCCTGCGCCCACGGTACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
CDS-3UTR CAA 90 bp CCCAGGCGGGGCTCCAGCCCTTGCCAGCTCCGGGAACTAAGGAATGAGGCTGCATCCATGAGGCACAGCTaGGGTGGTGGGATGCAGCGG +
Preference number: 5 (lower is better)
Translates to: PRRGSSPCQLRELRNEAASMRHS*GGGMQR
Trigger: CCGCTGCATCCCACCACCCAAGCTGTGCCTCATGGA...TGCAGCCTCATTCCTTAGTTCCCGGAGCTGGCAAGGGCTGGAGCCCCGCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CAA 90 bp TCCAGGGCATGGGCACAGGCCGGCTCACTCAGCAGCACCACAGGCGCTTTGGGGAGCCTGAGCTCCAGCTaGCTCAGCACCCAGCACATC +
Preference number: 5 (lower is better)
Translates to: SRAWAQAGSLSSTTGALGSLSSS*LSTQHI
Trigger: GATGTGCTGGGTGCTGAGCAAGCTGGAGCTCAGGCT...CCCCAAAGCGCCTGTGGTGCTGCTGAGTGAGCCGGCCTGTGCCCATGCCCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
CDS GCA 90 bp AGGTCCGGAAGAGGAGTAAGCAGTCCTGGCACCCCGGTCTCTCGCTaGAGCGCCGCCTCGGCAGGGCTGCTAAACATCGACTCCATGAGG +
Preference number: 5 (lower is better)
Translates to: RSGRGVSSPGTPVSR*SAASAGLLNIDSMR
Trigger: CCTCATGGAGTCGATGTTTAGCAGCCCTGCCGAGGCGGCGCTGCAGCGAGAGACCGGGGTGCCAGGACTGCTTACTCCTCTTCCGGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000471934.1
ENST00000476260.1
ENST00000477294.5
ENST00000490861.5
ENST00000492306.5
ENST00000495421.1
ENST00000524776.5
ENST00000527567.1
ENST00000529729.1
ENST00000530988.1
ENST00000532140.1
ENST00000534786.1
CDS CCA 90 bp GGCAGGGCTGCTAAACATCGACTCCATGAGGCACAGCTTGGGTGGTaGGATGCAGCGGGGACCTCCCTGGGACAGCTTCGGGGCCTGAGT +
Preference number: 5 (lower is better)
Translates to: GRAAKHRLHEAQLGW*DAAGTSLGQLRGLS
Trigger: ACTCAGGCCCCGAAGCTGTCCCAGGGAGGTCCCCGCTGCATCCCACCACCCAAGCTGTGCCTCATGGAGTCGATGTTTAGCAGCCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000471934.1
ENST00000476260.1
ENST00000477294.5
ENST00000490861.5
ENST00000492306.5
ENST00000495421.1
ENST00000524776.5
ENST00000527567.1
ENST00000529729.1
ENST00000530988.1
ENST00000532140.1
ENST00000534786.1
CDS-3UTR CAA 90 bp CTAAGGAATGAGGCTGCAGGACTGCTCTCAGCCAGCTCCAGCTGGGGCCGTGGGCAGTGCCTCACGGTGTaGGGCTACACCCAGTGTGCC +
Preference number: 5 (lower is better)
Translates to: LRNEAAGLLSASSSWGRGQCLTV*GYTQCA
Trigger: GGCACACTGGGTGTAGCCCAACACCGTGAGGCACTG...CCCACGGCCCCAGCTGGAGCTGGCTGAGAGCAGTCCTGCAGCCTCATTCCTTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CAA 90 bp CGCGGGCATCTCTGGCCCTCTCTACCAGATATCGTCTTCGTGCCCTTAGCCGTCGCGGGGCTCCAGCCCTaGCCAGCTCCGGGAACTAAG +
Preference number: 5 (lower is better)
Translates to: RGHLWPSLPDIVFVPLAVAGLQP*PAPGTK
Trigger: CTTAGTTCCCGGAGCTGGCAAGGGCTGGAGCCCCGC...GACGGCTAAGGGCACGAAGACGATATCTGGTAGAGAGGGCCAGAGATGCCCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CAA 90 bp AGGAATGAGGCTGCAGGACTGCTCTCAGCCAGCTCCAGCTGGGGCCGTGGGGTCCAGGGGGATGGGAGGTaGGTGCAGGGAGCACTAAAG +
Preference number: 5 (lower is better)
Translates to: RNEAAGLLSASSSWGRGVQGDGR*VQGALK
Trigger: CTTTAGTGCTCCCTGCACCAACCTCCCATCCCCCTG...GACCCCACGGCCCCAGCTGGAGCTGGCTGAGAGCAGTCCTGCAGCCTCATTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000495421.1
ENST00000524776.5
ENST00000527319.1
CDS-3UTR CAA 90 bp AGTTGGCAAGCTTGGCAGGGGTGGGCCGCCCCAGGGCCAACACATAGCTACGCTGGGCATGTGCTGAGCTaGTGCCAGTGCCAGGACAGG +
Preference number: 5 (lower is better)
Translates to: SWQAWQGWAAPGPTHSYAGHVLS*CQCQDR
Trigger: CCTGTCCTGGCACTGGCACAAGCTCAGCACATGCCC...AGCGTAGCTATGTGTTGGCCCTGGGGCGGCCCACCCCTGCCAAGCTTGCCAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495421.1
CDS-3UTR CAA 90 bp CTCCAAGGCCACAGAACGTTGACGAAGCACGAAGGCAACGGGCAGTGGGCGGGCAGCCTGAGCTCCAGCTaGCTCAGCACCCAGCACATC +
Preference number: 5 (lower is better)
Translates to: LQGHRTLTKHEGNGQWAGSLSSS*LSTQHI
Trigger: GATGTGCTGGGTGCTGAGCAAGCTGGAGCTCAGGCT...GCCCGCCCACTGCCCGTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
ENST00000532140.1
CDS-3UTR CAA 90 bp ACACGCATTACTGGGCATGTGCTGAGCTTGTGCCAGTGCCAGGACAGGACAGAGGGGAAGTTGGCAAGCTaGGCAGGGGTGGGCCGCCCC +
Preference number: 5 (lower is better)
Translates to: TRITGHVLSLCQCQDRTEGKLAS*AGVGRP
Trigger: GGGGCGGCCCACCCCTGCCAAGCTTGCCAACTTCCC...CTCTGTCCTGTCCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAATGCGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000459879.1
ENST00000495421.1
CDS-3UTR CAA 90 bp AGGCGATGGCAATCCCTCGTCTTCCACTCACAGCTTCTGTCACTGGCGTCTGACGGGAAGTTGGCAAGCTaGGCAGGGGTGGGCCGCCCC +
Preference number: 5 (lower is better)
Translates to: RRWQSLVFHSQLLSLASDGKLAS*AGVGRP
Trigger: GGGGCGGCCCACCCCTGCCAAGCTTGCCAACTTCCC...GTCAGACGCCAGTGACAGAAGCTGTGAGTGGAAGACGAGGGATTGCCATCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CAA 90 bp CCTGGTGCCCACCCCAAGAGCAGCCGACTCAGGTCTGGGTCAAGGTCTGGGTCATCCACCTCAGGGAAGTaGGCAAGCTTGGCAGGGGTG +
Preference number: 5 (lower is better)
Translates to: PGAHPKSSRLRSGSRSGSSTSGK*ASLAGV
Trigger: CACCCCTGCCAAGCTTGCCAACTTCCCTGAGGTGGA...TGACCCAGACCTTGACCCAGACCTGAGTCGGCTGCTCTTGGGGTGGGCACCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS CCA 90 bp GCTCACCCTTTGTGCATACACAGGCAAAACCCCTTACCCAGGGCATaGGCACAGGCCGGCTCACTCAGCAGCACCACAGGCGCTTTGGGG +
Preference number: 5 (lower is better)
Translates to: AHPLCIHRQNPLPRA*AQAGSLSSTTGALG
Trigger: CCCCAAAGCGCCTGTGGTGCTGCTGAGTGAGCCGGCCTGTGCCCATGCCCTGGGTAAGGGGTTTTGCCTGTGTATGCACAAAGGGTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490861.5
CDS-3UTR CAA 90 bp GGACAGACCCTCAACTGCAGCCTGGGAACTGGGATTGGCCAAAGGTCCTGGGCTTCCATGAGGCACAGCTaGGGTGGTGGGATGCAGCGG +
Preference number: 5 (lower is better)
Translates to: GQTLNCSLGTGIGQRSWASMRHS*GGGMQR
Trigger: CCGCTGCATCCCACCACCCAAGCTGTGCCTCATGGA...AGCCCAGGACCTTTGGCCAATCCCAGTTCCCAGGCTGCAGTTGAGGGTCTGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CAA 90 bp AGGCAACGGGCAGTGGGCGGGCTGGAGGGCTTAAGCAGGCAGGGCCAAAATGTACAGGGAACCCACTGGTaGGGGAAAAGCTGGGCTGGA +
Preference number: 5 (lower is better)
Translates to: RQRAVGGLEGLSRQGQNVQGTHW*GKSWAG
Trigger: TCCAGCCCAGCTTTTCCCCAACCAGTGGGTTCCCTG...TACATTTTGGCCCTGCCTGCTTAAGCCCTCCAGCCCGCCCACTGCCCGTTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000476260.1
ENST00000492306.5
CDS-3UTR CAA 90 bp GCCAGTGCCAGGACAGGACAGAGACGGATCCTATCCTGTGAAGGGCTGCCTGCTCAGTGCCTCACGGTGTaGGGCTACACCCAGTGTGCC +
Preference number: 5 (lower is better)
Translates to: ASARTGQRRILSCEGLPAQCLTV*GYTQCA
Trigger: GGCACACTGGGTGTAGCCCAACACCGTGAGGCACTG...AGCAGGCAGCCCTTCACAGGATAGGATCCGTCTCTGTCCTGTCCTGGCACTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255108.8
ENST00000459879.1
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CAA 90 bp AACACGCATTACTGGGCATGTGCTGAGCTTGTGCCAGTGCCAGGACAGGACAGAGGGAAGTTGGCAAGCTaGGCAGGGGTGGGCCGCCCC +
Preference number: 5 (lower is better)
Translates to: NTHYWACAELVPVPGQDRGKLAS*AGVGRP
Trigger: GGGGCGGCCCACCCCTGCCAAGCTTGCCAACTTCCC...TCTGTCCTGTCCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAATGCGTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000459879.1
ENST00000495421.1
CDS-3UTR CAA 90 bp GTGCCAGTGCCAGGACAGGACAGAGACGGATCCTATCCTGTGAAGGGCTGCCTGGCCTGGGAACTGGGATaGGCCAAAGGTCCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: VPVPGQDRDGSYPVKGCLAWELG*AKGPGL
Trigger: CAGCCCAGGACCTTTGGCCAATCCCAGTTCCCAGGC...CAGGCAGCCCTTCACAGGATAGGATCCGTCTCTGTCCTGTCCTGGCACTGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CAA 90 bp GCCAGTGCCAGGACAGGACAGAGACGGATCCTATCCTGTGAAGGGCTGCCTGCTGCCTGGGAACTGGGATaGGCCAAAGGTCCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: ASARTGQRRILSCEGLPAAWELG*AKGPGL
Trigger: CAGCCCAGGACCTTTGGCCAATCCCAGTTCCCAGGC...AGCAGGCAGCCCTTCACAGGATAGGATCCGTCTCTGTCCTGTCCTGGCACTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS CCA 90 bp AAGCCTCCTTTGTGCATACACAGGCAAAACCCCTTACCCAGGGCATaGGCACAGGCCGGCTCACTCAGCAGCACCACAGGCGCTTTGGGG +
Preference number: 5 (lower is better)
Translates to: KPPLCIHRQNPLPRA*AQAGSLSSTTGALG
Trigger: CCCCAAAGCGCCTGTGGTGCTGCTGAGTGAGCCGGCCTGTGCCCATGCCCTGGGTAAGGGGTTTTGCCTGTGTATGCACAAAGGAGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529729.1
CDS-3UTR CAA 90 bp GTCCAGGTACCGTGGGCGCAGGAGAGTAGCCAAAGCCTCCAGGGCATGGGCACACAAGGCCACAGAACGTaGACGAAGCACGAAGGCAAC +
Preference number: 5 (lower is better)
Translates to: VQVPWAQESSQSLQGMGTQGHRT*TKHEGN
Trigger: GTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTTG...TGTGCCCATGCCCTGGAGGCTTTGGCTACTCTCCTGCGCCCACGGTACCTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
CDS-3UTR CAA 90 bp CCGGGCACCCTCATCCTGAGTCTTCCCTGTATCTGGACAGCAGGAGGAGAAGGGCAGGGAACCCACTGGTaGGGGAAAAGCTGGGCTGGA +
Preference number: 5 (lower is better)
Translates to: PGTLILSLPCIWTAGGEGQGTHW*GKSWAG
Trigger: TCCAGCCCAGCTTTTCCCCAACCAGTGGGTTCCCTG...CCCTTCTCCTCCTGCTGTCCAGATACAGGGAAGACTCAGGATGAGGGTGCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CAA 90 bp CAGATGGGTCCAGAGGCCTCAGGGAAGTCCCTAAGCCCTTTATTCCATCAGCCAGCGGGGCTCCAGCCCTaGCCAGCTCCGGGAACTAAG +
Preference number: 5 (lower is better)
Translates to: QMGPEASGKSLSPLFHQPAGLQP*PAPGTK
Trigger: CTTAGTTCCCGGAGCTGGCAAGGGCTGGAGCCCCGC...TGGCTGATGGAATAAAGGGCTTAGGGACTTCCCTGAGGCCTCTGGACCCATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
ENST00000527319.1
CDS-3UTR CAA 90 bp GGACAGACCCTCAACTGCAGCCTGGGAACTGGGATTGGCCAAAGGTCCTGGGCTCAGGGGGATGGGAGGTaGGTGCAGGGAGCACTAAAG +
Preference number: 5 (lower is better)
Translates to: GQTLNCSLGTGIGQRSWAQGDGR*VQGALK
Trigger: CTTTAGTGCTCCCTGCACCAACCTCCCATCCCCCTG...AGCCCAGGACCTTTGGCCAATCCCAGTTCCCAGGCTGCAGTTGAGGGTCTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CAA 90 bp AGCCCCCTACATAGAAGGCACCATACTCTTCTAGACGCCTCCCTGGGGCAAGGGAGCCTGAGCTCCAGCTaGCTCAGCACCCAGCACATC +
Preference number: 5 (lower is better)
Translates to: SPLHRRHHTLLDASLGQGSLSSS*LSTQHI
Trigger: GATGTGCTGGGTGCTGAGCAAGCTGGAGCTCAGGCT...CCCTTGCCCCAGGGAGGCGTCTAGAAGAGTATGGTGCCTTCTATGTAGGGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495421.1
CDS-3UTR CAA 90 bp AGGCAACGGGCAGTGGGCGGGCTGGAGGGCTTAAGCAGGCAGGGCCAAAATGTACAAGGCCACAGAACGTaGACGAAGCACGAAGGCAAC +
Preference number: 5 (lower is better)
Translates to: RQRAVGGLEGLSRQGQNVQGHRT*TKHEGN
Trigger: GTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTTG...TACATTTTGGCCCTGCCTGCTTAAGCCCTCCAGCCCGCCCACTGCCCGTTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000532140.1
CDS-3UTR CAA 90 bp GACACAGAGCTCCAAGGCCACAGAACGTTGACGAAGCACGAAGGCAACGGGCAGCAGGGAACCCACTGGTaGGGGAAAAGCTGGGCTGGA +
Preference number: 5 (lower is better)
Translates to: DTELQGHRTLTKHEGNGQQGTHW*GKSWAG
Trigger: TCCAGCCCAGCTTTTCCCCAACCAGTGGGTTCCCTG...CTGCCCGTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTTGGAGCTCTGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
CDS-3UTR CAA 90 bp AAGGACAGACCCTCAACTGCAGCCTGGGAACTGGGATTGGCCAAAGGTCCTGGGTCCACCTCAGGGAAGTaGGCAAGCTTGGCAGGGGTG +
Preference number: 5 (lower is better)
Translates to: KDRPSTAAWELGLAKGPGSTSGK*ASLAGV
Trigger: CACCCCTGCCAAGCTTGCCAACTTCCCTGAGGTGGA...CCCAGGACCTTTGGCCAATCCCAGTTCCCAGGCTGCAGTTGAGGGTCTGTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255108.8
ENST00000495421.1
CDS-3UTR CAA 90 bp AGGCGATGGCAATCCCTCGTCTTCCACTCACAGCTTCTGTCACTGGCGTCTGACGCCTGGGAACTGGGATaGGCCAAAGGTCCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: RRWQSLVFHSQLLSLASDAWELG*AKGPGL
Trigger: CAGCCCAGGACCTTTGGCCAATCCCAGTTCCCAGGC...GTCAGACGCCAGTGACAGAAGCTGTGAGTGGAAGACGAGGGATTGCCATCGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495421.1
CDS-3UTR CAA 90 bp GTGCCTCACGGTGTTGGGCTACACCCAGTGTGCCTGCCAGCAGCCCTACCACGCAGCTTCCATGATCATTaGATGACTTCCAGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: VPHGVGLHPVCLPAALPRSFHDH*MTSRQV
Trigger: CACCTGCCTGGAAGTCATCAAATGATCATGGAAGCT...GCGTGGTAGGGCTGCTGGCAGGCACACTGGGTGTAGCCCAACACCGTGAGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CAA 90 bp TTCCATCAGCCAAACAACACGCATTACTGGGCATGTGCTGAGCTTGTGCCAGTGGCGGGGCTCCAGCCCTaGCCAGCTCCGGGAACTAAG +
Preference number: 5 (lower is better)
Translates to: FHQPNNTHYWACAELVPVAGLQP*PAPGTK
Trigger: CTTAGTTCCCGGAGCTGGCAAGGGCTGGAGCCCCGC...CACTGGCACAAGCTCAGCACATGCCCAGTAATGCGTGTTGTTTGGCTGATGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000527319.1
CDS-3UTR CAA 90 bp TGTGCTGAGCTTGTGCCAGTGCCAGGACAGGACAGAGACGGATCCTATCCTGTGCAGGGGGATGGGAGGTaGGTGCAGGGAGCACTAAAG +
Preference number: 5 (lower is better)
Translates to: CAELVPVPGQDRDGSYPVQGDGR*VQGALK
Trigger: CTTTAGTGCTCCCTGCACCAACCTCCCATCCCCCTG...CACAGGATAGGATCCGTCTCTGTCCTGTCCTGGCACTGGCACAAGCTCAGCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000527319.1
CDS-3UTR CAA 90 bp CATTACTGGGCATGTGCTGAGCTTGTGCCAGTGCCAGGACAGGACAGAGACGGACAGGGGGATGGGAGGTaGGTGCAGGGAGCACTAAAG +
Preference number: 5 (lower is better)
Translates to: HYWACAELVPVPGQDRDGQGDGR*VQGALK
Trigger: CTTTAGTGCTCCCTGCACCAACCTCCCATCCCCCTG...TCCGTCTCTGTCCTGTCCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000527319.1
CDS-3UTR CAA 90 bp AGCCAAACAACACGCATTACTGGGCATGTGCTGAGCTTGTGCCAGTGCCAGGACGGGCATGTGCTGAGCTaGTGCCAGTGCCAGGACAGG +
Preference number: 5 (lower is better)
Translates to: SQTTRITGHVLSLCQCQDGHVLS*CQCQDR
Trigger: CCTGTCCTGGCACTGGCACAAGCTCAGCACATGCCC...GTCCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAATGCGTGTTGTTTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000527319.1
CDS GCA 90 bp CCTGAGCTCCAGCTTGCTCAGCACCCAGCACATCCACGCAGCAGCTaGAGGGAAGATAGCATCAGAGAAATGGGTTCTCTTCTGGAGGCG +
Preference number: 5 (lower is better)
Translates to: PELQLAQHPAHPRSS*REDSIREMGSLLEA
Trigger: CGCCTCCAGAAGAGAACCCATTTCTCTGATGCTATCTTCCCTGCAGCTGCTGCGTGGATGTGCTGGGTGCTGAGCAAGCTGGAGCTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477294.5
ENST00000492306.5
ENST00000527567.1
ENST00000534655.1
ENST00000534786.1
CDS-3UTR CAA 90 bp AAAATGTATGAGAGCCTGAGCTCCAGCTTGCTCAGCACCCAGCACATCCACGCATCCATGAGGCACAGCTaGGGTGGTGGGATGCAGCGG +
Preference number: 5 (lower is better)
Translates to: KMYESLSSSLLSTQHIHASMRHS*GGGMQR
Trigger: CCGCTGCATCCCACCACCCAAGCTGTGCCTCATGGA...TGCGTGGATGTGCTGGGTGCTGAGCAAGCTGGAGCTCAGGCTCTCATACATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000532140.1
CDS-3UTR CAA 90 bp GGGCATGTGCTGAGCTTGTGCCAGTGCCAGGACAGGACAGAGACGGATCCTATCCAAGGCCACAGAACGTaGACGAAGCACGAAGGCAAC +
Preference number: 5 (lower is better)
Translates to: GHVLSLCQCQDRTETDPIQGHRT*TKHEGN
Trigger: GTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTTG...GATAGGATCCGTCTCTGTCCTGTCCTGGCACTGGCACAAGCTCAGCACATGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CAA 90 bp GACACAGAGCTCCAAGGCCACAGAACGTTGACGAAGCACGAAGGCAACGGGCAGCAAGGCCACAGAACGTaGACGAAGCACGAAGGCAAC +
Preference number: 5 (lower is better)
Translates to: DTELQGHRTLTKHEGNGQQGHRT*TKHEGN
Trigger: GTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTTG...CTGCCCGTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTTGGAGCTCTGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
CDS-3UTR CAA 90 bp GGGGATGGGAGGTTGGTGCAGGGAGCACTAAAGGTCCTAGCAGCCATTCATAAGCAGGGAACCCACTGGTaGGGGAAAAGCTGGGCTGGA +
Preference number: 5 (lower is better)
Translates to: GDGRLVQGALKVLAAIHKQGTHW*GKSWAG
Trigger: TCCAGCCCAGCTTTTCCCCAACCAGTGGGTTCCCTG...CTTATGAATGGCTGCTAGGACCTTTAGTGCTCCCTGCACCAACCTCCCATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CAA 90 bp TTGGTGCAGGGAGCACTAAAGGTCCTAGCAGCCATTCATAAGTCCATCTATGTCGGGAAGTTGGCAAGCTaGGCAGGGGTGGGCCGCCCC +
Preference number: 5 (lower is better)
Translates to: LVQGALKVLAAIHKSIYVGKLAS*AGVGRP
Trigger: GGGGCGGCCCACCCCTGCCAAGCTTGCCAACTTCCC...GACATAGATGGACTTATGAATGGCTGCTAGGACCTTTAGTGCTCCCTGCACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255108.8
ENST00000459879.1
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CAA 90 bp AGCCAAACAACACGCATTACTGGGCATGTGCTGAGCTTGTGCCAGTGCCAGGACTCCACCTCAGGGAAGTaGGCAAGCTTGGCAGGGGTG +
Preference number: 5 (lower is better)
Translates to: SQTTRITGHVLSLCQCQDSTSGK*ASLAGV
Trigger: CACCCCTGCCAAGCTTGCCAACTTCCCTGAGGTGGA...GTCCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAATGCGTGTTGTTTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000459879.1
ENST00000495421.1
CDS-3UTR CAA 90 bp CTCATCCTGAGTCTTCCCTGTATCTGGACAGCAGGAGGAGAAGGGTTGACCTGGTCCACCTCAGGGAAGTaGGCAAGCTTGGCAGGGGTG +
Preference number: 5 (lower is better)
Translates to: LILSLPCIWTAGGEGLTWSTSGK*ASLAGV
Trigger: CACCCCTGCCAAGCTTGCCAACTTCCCTGAGGTGGA...CCAGGTCAACCCTTCTCCTCCTGCTGTCCAGATACAGGGAAGACTCAGGATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CAA 90 bp AAACCCTGGTCTAGACTGTCTAGCACCTGCCTTTTGACAAGGACAGACCCTCAAGCGGGGCTCCAGCCCTaGCCAGCTCCGGGAACTAAG +
Preference number: 5 (lower is better)
Translates to: KPWSRLSSTCLLTRTDPQAGLQP*PAPGTK
Trigger: CTTAGTTCCCGGAGCTGGCAAGGGCTGGAGCCCCGC...TTGAGGGTCTGTCCTTGTCAAAAGGCAGGTGCTAGACAGTCTAGACCAGGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CAA 90 bp GCTGGGCTGGAGACTAGCAGGTCCAGGTACCGTGGGCGCAGGAGAGTAGCCAAATCTAGCACCTGCCTTTaGACAAGGACAGACCCTCAA +
Preference number: 5 (lower is better)
Translates to: AGLETSRSRYRGRRRVAKSSTCL*TRTDPQ
Trigger: TTGAGGGTCTGTCCTTGTCAAAAGGCAGGTGCTAGA...TTTGGCTACTCTCCTGCGCCCACGGTACCTGGACCTGCTAGTCTCCAGCCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495421.1
CDS-3UTR CAA 90 bp GTGTTGGGCTACACCCAGTGTGCCTGCCAGCAGCCCTACCACGCGGGCATCTCTGGTCTGGAGATATTTTaGGTTGTCACAACTGGGGGA +
Preference number: 5 (lower is better)
Translates to: VLGYTQCACQQPYHAGISGLEIF*VVTTGG
Trigger: TCCCCCAGTTGTGACAACCAAAAATATCTCCAGACC...AGAGATGCCCGCGTGGTAGGGCTGCTGGCAGGCACACTGGGTGTAGCCCAACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495421.1
CDS TCA 90 bp GAGGCGAGTTGCTGTCATCACTGCCGTAGGCTGTGTCACCCAGAATaGACATCTTTGACCCTGTCGTCTCCTCCAGTCGTGCAGCCACAG +
Preference number: 5 (lower is better)
Translates to: EASCCHHCRRLCHPE*TSLTLSSPPVVQPQ
Trigger: CTGTGGCTGCACGACTGGAGGAGACGACAGGGTCAAAGATGTTCATTCTGGGTGACACAGCCTACGGCAGTGATGACAGCAACTCGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477294.5
ENST00000492306.5
CDS TCA 90 bp CAGGAGAGTAGCCAAAGCCTCTGCCGTAGGCTGTGTCACCCAGAATaGACATCTTTGACCCTGTCGTCTCCTCCAGTCGTGCAGCCACAG +
Preference number: 5 (lower is better)
Translates to: QESSQSLCRRLCHPE*TSLTLSSPPVVQPQ
Trigger: CTGTGGCTGCACGACTGGAGGAGACGACAGGGTCAAAGATGTTCATTCTGGGTGACACAGCCTACGGCAGAGGCTTTGGCTACTCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524776.5
CDS-3UTR CAA 90 bp TCTGGGTTCTGGGCCTCAAAGGCCTTGACACAGAGCTCCAAGGCCACAGAACGTCAAGGCCACAGAACGTaGACGAAGCACGAAGGCAAC +
Preference number: 5 (lower is better)
Translates to: SGFWASKALTQSSKATERQGHRT*TKHEGN
Trigger: GTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTTG...ACGTTCTGTGGCCTTGGAGCTCTGTGTCAAGGCCTTTGAGGCCCAGAACCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476260.1
ENST00000492306.5
ENST00000495421.1
CDS-3UTR CAA 90 bp GCCATTCATAAGTCCATCTATGTCTCCAGCCCCACATGGTATCAGCCGCTTCCCCAGGGAACCCACTGGTaGGGGAAAAGCTGGGCTGGA +
Preference number: 5 (lower is better)
Translates to: AIHKSIYVSSPTWYQPLPQGTHW*GKSWAG
Trigger: TCCAGCCCAGCTTTTCCCCAACCAGTGGGTTCCCTG...GGGAAGCGGCTGATACCATGTGGGGCTGGAGACATAGATGGACTTATGAATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CAA 90 bp AGGTTGGTGCAGGGAGCACTAAAGGTCCTAGCAGCCATTCATAAGTCCATCTATGCGGGGCTCCAGCCCTaGCCAGCTCCGGGAACTAAG +
Preference number: 5 (lower is better)
Translates to: RLVQGALKVLAAIHKSIYAGLQP*PAPGTK
Trigger: CTTAGTTCCCGGAGCTGGCAAGGGCTGGAGCCCCGC...ATAGATGGACTTATGAATGGCTGCTAGGACCTTTAGTGCTCCCTGCACCAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000524776.5
ENST00000527319.1
CDS CCA 90 bp CAGCACATCCACGCAGCAGCTGCAGGGAAGATAGCATCAGAGAAATaGGTTCTCTTCTGGAGGCGAGTTGCTGTCATCACTGCCGTAGGC +
Preference number: 5 (lower is better)
Translates to: QHIHAAAAGKIASEK*VLFWRRVAVITAVG
Trigger: GCCTACGGCAGTGATGACAGCAACTCGCCTCCAGAAGAGAACCCATTTCTCTGATGCTATCTTCCCTGCAGCTGCTGCGTGGATGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477294.5
ENST00000492306.5
CDS-3UTR CAA 90 bp AAACCCTGGTCTAGACTGTCTAGCACCTGCCTTTTGACAAGGACAGACCCTCAACAGTGCCTCACGGTGTaGGGCTACACCCAGTGTGCC +
Preference number: 5 (lower is better)
Translates to: KPWSRLSSTCLLTRTDPQQCLTV*GYTQCA
Trigger: GGCACACTGGGTGTAGCCCAACACCGTGAGGCACTG...TTGAGGGTCTGTCCTTGTCAAAAGGCAGGTGCTAGACAGTCTAGACCAGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255108.8
ENST00000495421.1
CDS-3UTR CAA 90 bp GGACAGACCCTCAACTGCAGCCTGGGAACTGGGATTGGCCAAAGGTCCTGGGCTAGCTTCCATGATCATTaGATGACTTCCAGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: GQTLNCSLGTGIGQRSWASFHDH*MTSRQV
Trigger: CACCTGCCTGGAAGTCATCAAATGATCATGGAAGCT...AGCCCAGGACCTTTGGCCAATCCCAGTTCCCAGGCTGCAGTTGAGGGTCTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CAA 90 bp AGGACAGACCCTCAACTGCAGCCTGGGAACTGGGATTGGCCAAAGGTCCTGGGCGGTCTGGAGATATTTTaGGTTGTCACAACTGGGGGA +
Preference number: 5 (lower is better)
Translates to: RTDPQLQPGNWDWPKVLGGLEIF*VVTTGG
Trigger: TCCCCCAGTTGTGACAACCAAAAATATCTCCAGACC...GCCCAGGACCTTTGGCCAATCCCAGTTCCCAGGCTGCAGTTGAGGGTCTGTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CAA 90 bp GGACAGACCCTCAACTGCAGCCTGGGAACTGGGATTGGCCAAAGGTCCTGGGCTGGTCTGGAGATATTTTaGGTTGTCACAACTGGGGGA +
Preference number: 5 (lower is better)
Translates to: GQTLNCSLGTGIGQRSWAGLEIF*VVTTGG
Trigger: TCCCCCAGTTGTGACAACCAAAAATATCTCCAGACC...AGCCCAGGACCTTTGGCCAATCCCAGTTCCCAGGCTGCAGTTGAGGGTCTGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS CCA 90 bp GCCAAAGCCTCTGGAAGAGAAGGAGGTAGTGTTGAGGTTGGAGCCTaGCAAAGCAGGAGCTCCCTCATCCCCAGGAGACTAAATATGACC +
Preference number: 5 (lower is better)
Translates to: AKASGREGGSVEVGA*QSRSSLIPRRLNMT
Trigger: GGTCATATTTAGTCTCCTGGGGATGAGGGAGCTCCTGCTTTGCCAGGCTCCAACCTCAACACTACCTCCTTCTCTTCCAGAGGCTTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490861.5
CDS-3UTR CAA 90 bp GTCCAACCAATAGAACTTTCTGCCATGATGGCATATCCTGTAGCTGCACTGTCCTCCATGAGGCACAGCTaGGGTGGTGGGATGCAGCGG +
Preference number: 5 (lower is better)
Translates to: VQPIELSAMMAYPVAALSSMRHS*GGGMQR
Trigger: CCGCTGCATCCCACCACCCAAGCTGTGCCTCATGGA...GGACAGTGCAGCTACAGGATATGCCATCATGGCAGAAAGTTCTATTGGTTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CAA 90 bp GCCCCAAATGTCAAGTACGAGTTTGAGAAACCCTGGTCTAGACTGTCTAGCACCAGCCTGAGCTCCAGCTaGCTCAGCACCCAGCACATC +
Preference number: 5 (lower is better)
Translates to: APNVKYEFEKPWSRLSSTSLSSS*LSTQHI
Trigger: GATGTGCTGGGTGCTGAGCAAGCTGGAGCTCAGGCT...GGTGCTAGACAGTCTAGACCAGGGTTTCTCAAACTCGTACTTGACATTTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CAA 90 bp TTGGTGCAGGGAGCACTAAAGGTCCTAGCAGCCATTCATAAGTCCATCTATGTCCAGTGCCTCACGGTGTaGGGCTACACCCAGTGTGCC +
Preference number: 5 (lower is better)
Translates to: LVQGALKVLAAIHKSIYVQCLTV*GYTQCA
Trigger: GGCACACTGGGTGTAGCCCAACACCGTGAGGCACTG...GACATAGATGGACTTATGAATGGCTGCTAGGACCTTTAGTGCTCCCTGCACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255108.8
ENST00000459879.1
ENST00000495421.1
ENST00000524776.5
CDS-3UTR CAA 90 bp AAGGACAGACCCTCAACTGCAGCCTGGGAACTGGGATTGGCCAAAGGTCCTGGGAGCTTCCATGATCATTaGATGACTTCCAGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: KDRPSTAAWELGLAKGPGSFHDH*MTSRQV
Trigger: CACCTGCCTGGAAGTCATCAAATGATCATGGAAGCT...CCCAGGACCTTTGGCCAATCCCAGTTCCCAGGCTGCAGTTGAGGGTCTGTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CAA 90 bp GCACCCTACCATACACCAGACAGCCCCACAACAAAGAATTATCTGGCCCCAAATCAGGGGGATGGGAGGTaGGTGCAGGGAGCACTAAAG +
Preference number: 5 (lower is better)
Translates to: APYHTPDSPTTKNYLAPNQGDGR*VQGALK
Trigger: CTTTAGTGCTCCCTGCACCAACCTCCCATCCCCCTG...ATTTGGGGCCAGATAATTCTTTGTTGTGGGGCTGTCTGGTGTATGGTAGGGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CAA 90 bp TTGGTGCAGGGAGCACTAAAGGTCCTAGCAGCCATTCATAAGTCCATCTATGTCGGGCATGTGCTGAGCTaGTGCCAGTGCCAGGACAGG +
Preference number: 5 (lower is better)
Translates to: LVQGALKVLAAIHKSIYVGHVLS*CQCQDR
Trigger: CCTGTCCTGGCACTGGCACAAGCTCAGCACATGCCC...GACATAGATGGACTTATGAATGGCTGCTAGGACCTTTAGTGCTCCCTGCACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000527319.1
CDS-3UTR CAA 90 bp GTCCAACCAATAGAACTTTCTGCCATGATGGCATATCCTGTAGCTGCACTGTCCGGGCATGTGCTGAGCTaGTGCCAGTGCCAGGACAGG +
Preference number: 5 (lower is better)
Translates to: VQPIELSAMMAYPVAALSGHVLS*CQCQDR
Trigger: CCTGTCCTGGCACTGGCACAAGCTCAGCACATGCCC...GGACAGTGCAGCTACAGGATATGCCATCATGGCAGAAAGTTCTATTGGTTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CAA 90 bp CCAATAGAACTTTCTGCCATGATGGCATATCCTGTAGCTGCACTGTCCCCTCATAGCCTGAGCTCCAGCTaGCTCAGCACCCAGCACATC +
Preference number: 5 (lower is better)
Translates to: PIELSAMMAYPVAALSPHSLSSS*LSTQHI
Trigger: GATGTGCTGGGTGCTGAGCAAGCTGGAGCTCAGGCT...ATGAGGGGACAGTGCAGCTACAGGATATGCCATCATGGCAGAAAGTTCTATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CAA 90 bp GCTGAGCTTGTGCCAGTGCCAGGACAGGACAGAGACGGATCCTATCCTGTGAAGAGCTTCCATGATCATTaGATGACTTCCAGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: AELVPVPGQDRDGSYPVKSFHDH*MTSRQV
Trigger: CACCTGCCTGGAAGTCATCAAATGATCATGGAAGCT...CTTCACAGGATAGGATCCGTCTCTGTCCTGTCCTGGCACTGGCACAAGCTCAGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000527319.1
CDS-3UTR CAA 90 bp ACAGAGCTCCAAGGCCACAGAACGTTGACGAAGCACGAAGGCAACGGGCAGTGGGGAGAAACACCACCATaGAAGGCAATCACTGTCATA +
Preference number: 5 (lower is better)
Translates to: TELQGHRTLTKHEGNGQWGETPP*KAITVI
Trigger: TATGACAGTGATTGCCTTCAATGGTGGTGTTTCTCC...CCACTGCCCGTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTTGGAGCTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476260.1
CDS CCA 90 bp CAGCACATCCACGCAGCAGCTGCAGGGAAGATAGCATCAGAGAAATaGGTTCTCTTCTGGAGGCGAGTTGCTGTCATCACTGGGAAATGT +
Preference number: 5 (lower is better)
Translates to: QHIHAAAAGKIASEK*VLFWRRVAVITGKC
Trigger: ACATTTCCCAGTGATGACAGCAACTCGCCTCCAGAAGAGAACCCATTTCTCTGATGCTATCTTCCCTGCAGCTGCTGCGTGGATGTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527567.1
ENST00000534655.1
ENST00000534786.1
CDS-3UTR CAA 90 bp GCACTAAAGGTCCTAGCAGCCATTCATAAGTCCATCTATGTCTCCAGCCCCACACAAGGCCACAGAACGTaGACGAAGCACGAAGGCAAC +
Preference number: 5 (lower is better)
Translates to: ALKVLAAIHKSIYVSSPTQGHRT*TKHEGN
Trigger: GTTGCCTTCGTGCTTCGTCAACGTTCTGTGGCCTTG...TGTGGGGCTGGAGACATAGATGGACTTATGAATGGCTGCTAGGACCTTTAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CAA 90 bp GTTGTCACAACTGGGGGAGTGCTTCTGATGTCTAGTGGGCAGAGGCCAGGGATGATGTCAAGTACGAGTTaGAGAAACCCTGGTCTAGAC +
Preference number: 5 (lower is better)
Translates to: VVTTGGVLLMSSGQRPGMMSSTS*RNPGLD
Trigger: GTCTAGACCAGGGTTTCTCAAACTCGTACTTGACAT...CATCCCTGGCCTCTGCCCACTAGACATCAGAAGCACTCCCCCAGTTGTGACAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS CCA 90 bp CAGGAGCTCCCTCATCCCCAGGAGACTAAATATGACCCAGTAGGCTaGGGCCAAGCCCATATCAAGAGTTCTATGGATGGTATATGGAAA +
Preference number: 5 (lower is better)
Translates to: QELPHPQETKYDPVG*GQAHIKSSMDGIWK
Trigger: TTTCCATATACCATCCATAGAACTCTTGATATGGGCTTGGCCCCAGCCTACTGGGTCATATTTAGTCTCCTGGGGATGAGGGAGCTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490861.5
CDS-3UTR CAA 90 bp GCCCCAAATGTCAAGTACGAGTTTGAGAAACCCTGGTCTAGACTGTCTAGCACCTCTAGCACCTGCCTTTaGACAAGGACAGACCCTCAA +
Preference number: 5 (lower is better)
Translates to: APNVKYEFEKPWSRLSSTSSTCL*TRTDPQ
Trigger: TTGAGGGTCTGTCCTTGTCAAAAGGCAGGTGCTAGA...GGTGCTAGACAGTCTAGACCAGGGTTTCTCAAACTCGTACTTGACATTTGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CAA 90 bp AAACCCTGGTCTAGACTGTCTAGCACCTGCCTTTTGACAAGGACAGACCCTCAATCTAGCACCTGCCTTTaGACAAGGACAGACCCTCAA +
Preference number: 5 (lower is better)
Translates to: KPWSRLSSTCLLTRTDPQSSTCL*TRTDPQ
Trigger: TTGAGGGTCTGTCCTTGTCAAAAGGCAGGTGCTAGA...TTGAGGGTCTGTCCTTGTCAAAAGGCAGGTGCTAGACAGTCTAGACCAGGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CAA 90 bp GGAAGACAGATGGGTCCAGAGGCCTCAGGGAAGTCCCTAAGCCCTTTATTCCATATGTCAAGTACGAGTTaGAGAAACCCTGGTCTAGAC +
Preference number: 5 (lower is better)
Translates to: GRQMGPEASGKSLSPLFHMSSTS*RNPGLD
Trigger: GTCTAGACCAGGGTTTCTCAAACTCGTACTTGACAT...ATGGAATAAAGGGCTTAGGGACTTCCCTGAGGCCTCTGGACCCATCTGTCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CAA 90 bp CTGGCCCCAAATGTCAAGTACGAGTTTGAGAAACCCTGGTCTAGACTGTCTAGCAGCTTCCATGATCATTaGATGACTTCCAGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: LAPNVKYEFEKPWSRLSSSFHDH*MTSRQV
Trigger: CACCTGCCTGGAAGTCATCAAATGATCATGGAAGCT...GCTAGACAGTCTAGACCAGGGTTTCTCAAACTCGTACTTGACATTTGGGGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS-3UTR CAA 90 bp GCACTAAAGGTCCTAGCAGCCATTCATAAGTCCATCTATGTCTCCAGCCCCACAAGCTTCCATGATCATTaGATGACTTCCAGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: ALKVLAAIHKSIYVSSPTSFHDH*MTSRQV
Trigger: CACCTGCCTGGAAGTCATCAAATGATCATGGAAGCT...TGTGGGGCTGGAGACATAGATGGACTTATGAATGGCTGCTAGGACCTTTAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000459879.1
ENST00000495421.1
ENST00000524776.5
ENST00000527319.1
CDS-3UTR CAA 90 bp GTCCAACCAATAGAACTTTCTGCCATGATGGCATATCCTGTAGCTGCACTGTCCATGTCAAGTACGAGTTaGAGAAACCCTGGTCTAGAC +
Preference number: 5 (lower is better)
Translates to: VQPIELSAMMAYPVAALSMSSTS*RNPGLD
Trigger: GTCTAGACCAGGGTTTCTCAAACTCGTACTTGACAT...GGACAGTGCAGCTACAGGATATGCCATCATGGCAGAAAGTTCTATTGGTTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000495421.1
CDS CAA 90 bp GCCGCCTCGGCAGGGCTGCTAAACATCGACTCCATGAGGCACAGCTaGGGTGGTGGGATGCAGCGGGGACCTCCCTGGGACAGCTTCGGG +
Preference number: 6 (lower is better)
Translates to: AASAGLLNIDSMRHS*GGGMQRGPPWDSFG
Trigger: CCCGAAGCTGTCCCAGGGAGGTCCCCGCTGCATCCCACCACCCAAGCTGTGCCTCATGGAGTCGATGTTTAGCAGCCCTGCCGAGGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000471934.1
ENST00000476260.1
ENST00000477294.5
ENST00000490861.5
ENST00000492306.5
ENST00000495421.1
ENST00000524776.5
ENST00000527567.1
ENST00000529729.1
ENST00000530988.1
ENST00000532140.1
ENST00000534786.1
CDS GCA 72 bp AGAGGAGTAAGCAGTCCTGGCACCCCGGTCTCTCGCTaGAGCGCCGCCTCGGCAGGGCTGCTAAACATCGAC +
Preference number: 6 (lower is better)
Translates to: RGVSSPGTPVSR*SAASAGLLNID
Trigger: GTCGATGTTTAGCAGCCCTGCCGAGGCGGCGCTGCAGCGAGAGACCGGGGTGCCAGGACTGCTTACTCCTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000471934.1
ENST00000476260.1
ENST00000477294.5
ENST00000490861.5
ENST00000492306.5
ENST00000495421.1
ENST00000524776.5
ENST00000527567.1
ENST00000529729.1
ENST00000530988.1
ENST00000532140.1
ENST00000534786.1
CDS CAA 72 bp GCAGGGCTGCTAAACATCGACTCCATGAGGCACAGCTaGGGTGGTGGGATGCAGCGGGGACCTCCCTGGGAC +
Preference number: 6 (lower is better)
Translates to: AGLLNIDSMRHS*GGGMQRGPPWD
Trigger: GTCCCAGGGAGGTCCCCGCTGCATCCCACCACCCAAGCTGTGCCTCATGGAGTCGATGTTTAGCAGCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000471934.1
ENST00000476260.1
ENST00000477294.5
ENST00000490861.5
ENST00000492306.5
ENST00000495421.1
ENST00000524776.5
ENST00000527567.1
ENST00000529729.1
ENST00000530988.1
ENST00000532140.1
ENST00000534786.1
CDS CCA 72 bp GCTAAACATCGACTCCATGAGGCACAGCTTGGGTGGTaGGATGCAGCGGGGACCTCCCTGGGACAGCTTCGG +
Preference number: 6 (lower is better)
Translates to: AKHRLHEAQLGW*DAAGTSLGQLR
Trigger: CCGAAGCTGTCCCAGGGAGGTCCCCGCTGCATCCCACCACCCAAGCTGTGCCTCATGGAGTCGATGTTTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000471934.1
ENST00000476260.1
ENST00000477294.5
ENST00000490861.5
ENST00000492306.5
ENST00000495421.1
ENST00000524776.5
ENST00000527567.1
ENST00000529729.1
ENST00000530988.1
ENST00000532140.1
ENST00000534786.1
CDS CCA 72 bp AGTCGTGCAGCCACAGCCACAGCATCTCCCAATAGCTaGTCAGGGAACTGCAAGGCAACACCCCAGGTCGCG +
Preference number: 6 (lower is better)
Translates to: SRAATATASPNS*SGNCKATPQVA
Trigger: CGCGACCTGGGGTGTTGCCTTGCAGTTCCCTGACCAGCTATTGGGAGATGCTGTGGCTGTGGCTGCACGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532140.1
CDS CCA 72 bp AGTCGTGCAGCCACAGCCACAGCATCTCCCAATAGCTaGTCAGGGAACTGCAAGGCAACCCCAGGTCGCGGA +
Preference number: 6 (lower is better)
Translates to: SRAATATASPNS*SGNCKATPGRG
Trigger: TCCGCGACCTGGGGTTGCCTTGCAGTTCCCTGACCAGCTATTGGGAGATGCTGTGGCTGTGGCTGCACGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534786.1
CDS TCA 72 bp CCTGCCGTAGGCTGTGTCACCCAGAATGAACATCTTTaGCCCTGTCGTCTCCTCCAGTCGTGCAGCCACAGC +
Preference number: 6 (lower is better)
Translates to: PAVGCVTQNEHL*PCRLLQSCSHS
Trigger: GCTGTGGCTGCACGACTGGAGGAGACGACAGGGTCAAAGATGTTCATTCTGGGTGACACAGCCTACGGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471934.1
ENST00000476260.1
ENST00000527567.1
ENST00000530988.1
ENST00000534786.1
CDS CCA 72 bp AGTCGTGCAGCCACAGCCACAGCATCTCCCAATAGCTaGTCAGGGAACTGCAAGGCAACTCGTTCACACCCC +
Preference number: 6 (lower is better)
Translates to: SRAATATASPNS*SGNCKATRSHP
Trigger: GGGGTGTGAACGAGTTGCCTTGCAGTTCCCTGACCAGCTATTGGGAGATGCTGTGGCTGTGGCTGCACGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255108.8
ENST00000396758.6
ENST00000471934.1
ENST00000490861.5
ENST00000492306.5
ENST00000524776.5
ENST00000527567.1
ENST00000529729.1
CDS CCA 72 bp AGTCGTGCAGCCACAGCCACAGCATCTCCCAATAGCTaGTCAGGGAACTGCAAGGCAACACTCCGTCCAGGT +
Preference number: 6 (lower is better)
Translates to: SRAATATASPNS*SGNCKATLRPG
Trigger: ACCTGGACGGAGTGTTGCCTTGCAGTTCCCTGACCAGCTATTGGGAGATGCTGTGGCTGTGGCTGCACGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476260.1
ENST00000477294.5
ENST00000495421.1
ENST00000530988.1
CDS TCA 72 bp ACTGCCGTAGGCTGTGTCACCCAGAATGAACATCTTTaGCCCTGTCGTCTCCTCCAGTCGTGCAGCCACAGC +
Preference number: 6 (lower is better)
Translates to: TAVGCVTQNEHL*PCRLLQSCSHS
Trigger: GCTGTGGCTGCACGACTGGAGGAGACGACAGGGTCAAAGATGTTCATTCTGGGTGACACAGCCTACGGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477294.5
ENST00000492306.5
CDS TCA 72 bp TCTGCCGTAGGCTGTGTCACCCAGAATGAACATCTTTaGCCCTGTCGTCTCCTCCAGTCGTGCAGCCACAGC +
Preference number: 6 (lower is better)
Translates to: SAVGCVTQNEHL*PCRLLQSCSHS
Trigger: GCTGTGGCTGCACGACTGGAGGAGACGACAGGGTCAAAGATGTTCATTCTGGGTGACACAGCCTACGGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524776.5
CDS TCA 72 bp AGCCAAAGCCTCTGCCGTAGGCTGTGTCACCCAGAATaGACATCTTTGACCCTGTCGTCTCCTCCAGTCGTG +
Preference number: 6 (lower is better)
Translates to: SQSLCRRLCHPE*TSLTLSSPPVV
Trigger: CACGACTGGAGGAGACGACAGGGTCAAAGATGTTCATTCTGGGTGACACAGCCTACGGCAGAGGCTTTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524776.5
CDS CCA 72 bp TCTGGAAGAGAAGGAGGTAGTGTTGAGGTTGGAGCCTaGCAAAGCAGGAGCTCCCTCATCCCCAGGAGACTA +
Preference number: 6 (lower is better)
Translates to: SGREGGSVEVGA*QSRSSLIPRRL
Trigger: TAGTCTCCTGGGGATGAGGGAGCTCCTGCTTTGCCAGGCTCCAACCTCAACACTACCTCCTTCTCTTCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490861.5
CDS TCA 72 bp TGCTGTCATCACTGCCGTAGGCTGTGTCACCCAGAATaGACATCTTTGACCCTGTCGTCTCCTCCAGTCGTG +
Preference number: 6 (lower is better)
Translates to: CCHHCRRLCHPE*TSLTLSSPPVV
Trigger: CACGACTGGAGGAGACGACAGGGTCAAAGATGTTCATTCTGGGTGACACAGCCTACGGCAGTGATGACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477294.5
ENST00000492306.5
CDS TCA 72 bp CAAGTTCACACCTGCCGTAGGCTGTGTCACCCAGAATaGACATCTTTGACCCTGTCGTCTCCTCCAGTCGTG +
Preference number: 6 (lower is better)
Translates to: QVHTCRRLCHPE*TSLTLSSPPVV
Trigger: CACGACTGGAGGAGACGACAGGGTCAAAGATGTTCATTCTGGGTGACACAGCCTACGGCAGGTGTGAACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471934.1
ENST00000476260.1
ENST00000527567.1
ENST00000530988.1
ENST00000534786.1
CDS GCA 72 bp CAGCTTGCTCAGCACCCAGCACATCCACGCAGCAGCTaGAGGGAAGATAGCATCAGAGAAATGGGTTCTCTT +
Preference number: 6 (lower is better)
Translates to: QLAQHPAHPRSS*REDSIREMGSL
Trigger: AAGAGAACCCATTTCTCTGATGCTATCTTCCCTGCAGCTGCTGCGTGGATGTGCTGGGTGCTGAGCAAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477294.5
ENST00000492306.5
ENST00000527567.1
ENST00000534655.1
ENST00000534786.1
CDS CCA 72 bp CACGCAGCAGCTGCAGGGAAGATAGCATCAGAGAAATaGGTTCTCTTCTGGAGGCGAGTTGCTGTCATCACT +
Preference number: 6 (lower is better)
Translates to: HAAAAGKIASEK*VLFWRRVAVIT
Trigger: AGTGATGACAGCAACTCGCCTCCAGAAGAGAACCCATTTCTCTGATGCTATCTTCCCTGCAGCTGCTGCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477294.5
ENST00000492306.5
ENST00000527567.1
ENST00000534655.1
ENST00000534786.1
CDS CCA 72 bp CCTCATCCCCAGGAGACTAAATATGACCCAGTAGGCTaGGGCCAAGCCCATATCAAGAGTTCTATGGATGGT +
Preference number: 6 (lower is better)
Translates to: PHPQETKYDPVG*GQAHIKSSMDG
Trigger: ACCATCCATAGAACTCTTGATATGGGCTTGGCCCCAGCCTACTGGGTCATATTTAGTCTCCTGGGGATGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490861.5
CDS GCA 72 bp AGCATCAGAGAAATGGGTTCTCTTCTGGAGGCGAGTTaGTGTCATCACTGGGAAATGTGGTCAGTGAATAAA +
Preference number: 6 (lower is better)
Translates to: SIREMGSLLEAS*CHHWEMWSVNK
Trigger: TTTATTCACTGACCACATTTCCCAGTGATGACAGCAACTCGCCTCCAGAAGAGAACCCATTTCTCTGATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527567.1
ENST00000534655.1
ENST00000534786.1
CDS CAA 72 bp ACGCAGCAGCATTATCATCAAGGAGAAACACCACCATaGAAGGCAATCACTGTCATAGACGTAAAACCCCAT +
Preference number: 6 (lower is better)
Translates to: TQQHYHQGETPP*KAITVIDVKPH
Trigger: ATGGGGTTTTACGTCTATGACAGTGATTGCCTTCAATGGTGGTGTTTCTCCTTGATGATAATGCTGCTGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471934.1
ENST00000476260.1
CDS CAA 72 bp AGTCATTACCATTATCATCAAGGAGAAACACCACCATaGAAGGCAATCACTGTCATAGACGTAAAACCCCAT +
Preference number: 6 (lower is better)
Translates to: SHYHYHQGETPP*KAITVIDVKPH
Trigger: ATGGGGTTTTACGTCTATGACAGTGATTGCCTTCAATGGTGGTGTTTCTCCTTGATGATAATGGTAATGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527567.1
ENST00000530988.1
ENST00000534786.1