RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DPF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000011332

Ensembl transcript IDs: ENST00000355526.10, ENST00000355526.9, ENST00000412732.5, ENST00000414789.5, ENST00000416611.5, ENST00000418517.5, ENST00000420980.7, ENST00000438060.5, ENST00000438365.5, ENST00000456296.5, ENST00000471976.5, ENST00000472656.5, ENST00000473716.5, ENST00000475938.1, ENST00000488378.1, ENST00000494031.5, ENST00000586624.1, ENST00000614244.4

Found 344 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGTTCACATCATGCAGTATCCACCGTGGGCACCAGGAGGGGCGGGTaGACACCACGCCCACCGCCCTGGGCACAAGAGGGGAAGGCGCCC +
Preference number: 1 (lower is better)
Translates to: GSHHAVSTVGTRRGG*TPRPPPWAQEGKAP
Trigger: GGGCGCCTTCCCCTCTTGTGCCCAGGGCGGTGGGCGTGGTGTCCACCCGCCCCTCCTGGTGCCCACGGTGGATACTGCATGATGTGAACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
3UTR CCA 90 bp TCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTaGCCGGGCCCACCCACCCACAGGGCAGACATTCCACTTGCACAG +
Preference number: 1 (lower is better)
Translates to: SICQGTEREGGRERP*PGPPTHRADIPLAQ
Trigger: CTGTGCAAGTGGAATGTCTGCCCTGTGGGTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000355526.9
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
3UTR-3UTR CCA 90 bp ACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACCCACAGGCCGGGGGCTCCGCCATaGGGGGACTCAGGCAGTACA +
Preference number: 2 (lower is better)
Translates to: TEREGGRERPWPGPPTHRPGAPP*GDSGST
Trigger: TGTACTGCCTGAGTCCCCCCATGGCGGAGCCCCCGG...CCTGTGGGTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000418517.5
3UTR-3UTR TCA 90 bp TGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCAGGGTGGGGGAGAATTaGGGAGCTCGGAGAGGCAGG +
Preference number: 2 (lower is better)
Translates to: CQGTEREGGRERPWPGPPRVGEN*GARRGR
Trigger: CCTGCCTCTCCGAGCTCCTCAATTCTCCCCCACCCT...GGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000355526.9
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
3UTR-3UTR GCA 90 bp GCCCTGGCCGGGCCCACCCACCCACAGGGCAGACATTCCACTTGCACAGAGGGGGGGGCGCGGGACGGCTaGAGCTCCAGAAATTGGGGT +
Preference number: 2 (lower is better)
Translates to: ALAGPTHPQGRHSTCTEGGARDG*SSRNWG
Trigger: ACCCCAATTTCTGGAGCTGCAGCCGTCCCGCGCCCC...CCCCTCTGTGCAAGTGGAATGTCTGCCCTGTGGGTGGGTGGGCCCGGCCAGGGC
69% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
3UTR-3UTR TCA 90 bp GCCCACCTTGGGTGGGGCGCGGGACGGCTGCAGCTCCAGAAATTGGGGTTGGGGAGGGTGGGGGAGAATTaGGGAGCTCGGAGAGGCAGG +
Preference number: 2 (lower is better)
Translates to: AHLGWGAGRLQLQKLGLGRVGEN*GARRGR
Trigger: CCTGCCTCTCCGAGCTCCTCAATTCTCCCCCACCCT...CCCCAACCCCAATTTCTGGAGCTGCAGCCGTCCCGCGCCCCACCCAAGGTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
3UTR-3UTR CCA 90 bp GAGGCGGGTGCCCGGTGGACACTCTCAGCAGCGCCCCTCCACCCAGCCAGGCCTGCGGGATGTTCAGGGTaGGGGAGAATTGAGGAGCTC +
Preference number: 2 (lower is better)
Translates to: EAGARWTLSAAPLHPARPAGCSG*GRIEEL
Trigger: GAGCTCCTCAATTCTCCCCCACCCTGAACATCCCGC...AGGCCTGGCTGGGTGGAGGGGCGCTGCTGAGAGTGTCCACCGGGCACCCGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
3UTR-3UTR CCA 90 bp CGGAGTCTGTGCTTCTCATTCCAGCAGGCGCTGGGCGGGGGCCCACCCGGCCCCGCGGGATGTTCAGGGTaGGGGAGAATTGAGGAGCTC +
Preference number: 2 (lower is better)
Translates to: RSLCFSFQQALGGGPPGPAGCSG*GRIEEL
Trigger: GAGCTCCTCAATTCTCCCCCACCCTGAACATCCCGC...GGGGCCGGGTGGGCCCCCGCCCAGCGCCTGCTGGAATGAGAAGCACAGACTCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
3UTR-3UTR CCA 90 bp ACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACCCACAGGGCGGGATGTTCAGGGTaGGGGAGAATTGAGGAGCTC +
Preference number: 2 (lower is better)
Translates to: TEREGGRERPWPGPPTHRAGCSG*GRIEEL
Trigger: GAGCTCCTCAATTCTCCCCCACCCTGAACATCCCGC...CCTGTGGGTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000355526.9
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
3UTR-3UTR CCA 90 bp ACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACCCACAGGGAGGGGAGAAGCCCCTaGTGTCCATTTGCCAAGGGA +
Preference number: 2 (lower is better)
Translates to: TEREGGRERPWPGPPTHREGRSP*CPFAKG
Trigger: TCCCTTGGCAAATGGACACCAGGGGCTTCTCCCCTC...CCTGTGGGTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000355526.9
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
3UTR-3UTR CCA 90 bp CCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTCCACGCCCACCGCCCTaGGCACAAGAGGGGAAGGCG +
Preference number: 2 (lower is better)
Translates to: PWCPFAKGQRGREGGRGPPRPPP*AQEGKA
Trigger: CGCCTTCCCCTCTTGTGCCCAGGGCGGTGGGCGTGG...AGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
3UTR-3UTR CCA 90 bp GCCCTGGCCGGGCCCACCCACCCACAGGGCAGACATTCCACTTGCACAGAGGGGATGCAGTATCCACCGTaGGCACCAGGAGGGGCGGGT +
Preference number: 2 (lower is better)
Translates to: ALAGPTHPQGRHSTCTEGMQYPP*APGGAG
Trigger: ACCCGCCCCTCCTGGTGCCCACGGTGGATACTGCAT...CCCCTCTGTGCAAGTGGAATGTCTGCCCTGTGGGTGGGTGGGCCCGGCCAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
3UTR-3UTR GCA 90 bp GGGGAAGGCGCCCACCTTGGGTGGGGCGCGGGACGGCTGCAGCTCCAGAAATTGAAAAGGCTCTGTCCATaGCCCTGGCTGGCACCCACC +
Preference number: 2 (lower is better)
Translates to: GEGAHLGWGAGRLQLQKLKRLCP*PWLAPT
Trigger: GGTGGGTGCCAGCCAGGGGCATGGACAGAGCCTTTT...CAATTTCTGGAGCTGCAGCCGTCCCGCGCCCCACCCAAGGTGGGCGCCTTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
3UTR-3UTR CCA 90 bp GCCCTGGCCGGGCCCACCCACCCACAGGGCAGACATTCCACTTGCACAGAGGGGGCGGGATGTTCAGGGTaGGGGAGAATTGAGGAGCTC +
Preference number: 2 (lower is better)
Translates to: ALAGPTHPQGRHSTCTEGAGCSG*GRIEEL
Trigger: GAGCTCCTCAATTCTCCCCCACCCTGAACATCCCGC...CCCCTCTGTGCAAGTGGAATGTCTGCCCTGTGGGTGGGTGGGCCCGGCCAGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000355526.9
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
3UTR-3UTR CCA 90 bp GCCCTGGCCGGGCCCACCCACCCACAGGGCAGACATTCCACTTGCACAGAGGGGGAGGGGAGAAGCCCCTaGTGTCCATTTGCCAAGGGA +
Preference number: 2 (lower is better)
Translates to: ALAGPTHPQGRHSTCTEGEGRSP*CPFAKG
Trigger: TCCCTTGGCAAATGGACACCAGGGGCTTCTCCCCTC...CCCCTCTGTGCAAGTGGAATGTCTGCCCTGTGGGTGGGTGGGCCCGGCCAGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000355526.9
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
3UTR-3UTR CCA 90 bp CCCGGTGGACACTCTCAGCAGCGCCCCTCCACCCAGCCAGGCCTTGGAGGACTCGAGGGGAGAAGCCCCTaGTGTCCATTTGCCAAGGGA +
Preference number: 2 (lower is better)
Translates to: PGGHSQQRPSTQPGLGGLEGRSP*CPFAKG
Trigger: TCCCTTGGCAAATGGACACCAGGGGCTTCTCCCCTC...GAGTCCTCCAAGGCCTGGCTGGGTGGAGGGGCGCTGCTGAGAGTGTCCACCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
3UTR-3UTR CCA 90 bp AGAAAAGGAGTCCGTGGCGGAGTCTGTGCTTCTCATTCCAGCAGGCGCTGGGCGGAGGCGGGTGCCCGGTaGACACTCTCAGCAGCGCCC +
Preference number: 2 (lower is better)
Translates to: RKGVRGGVCASHSSRRWAEAGAR*TLSAAP
Trigger: GGGCGCTGCTGAGAGTGTCCACCGGGCACCCGCCTC...CGCCCAGCGCCTGCTGGAATGAGAAGCACAGACTCCGCCACGGACTCCTTTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
3UTR-3UTR CCA 90 bp AGGGAGAGAAAAGGAGTCCGTGGCGGAGTCTGTGCTTCTCATTCCAGCAGGCGCGGAAGGCGCCCACCTTaGGTGGGGCGCGGGACGGCT +
Preference number: 2 (lower is better)
Translates to: RERKGVRGGVCASHSSRRGRRPP*VGRGTA
Trigger: AGCCGTCCCGCGCCCCACCCAAGGTGGGCGCCTTCC...GCGCCTGCTGGAATGAGAAGCACAGACTCCGCCACGGACTCCTTTTCTCTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
3UTR-3UTR TCA 90 bp AGCCCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCAGGGTGGGGGAGAATTaGGGAGCTCGGAGAGGCAGG +
Preference number: 2 (lower is better)
Translates to: SPWCPFAKGQRGREGGRGRVGEN*GARRGR
Trigger: CCTGCCTCTCCGAGCTCCTCAATTCTCCCCCACCCT...GCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000355526.9
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
3UTR-3UTR GCA 90 bp GAGAGGCAGGTAGGCGAGCACCACCCCAGAGTCGCGGCGAGCCGAGCCGGCCTAACCCCCGATGCCATATaGCTTTCCTTTGGCCCTGTT +
Preference number: 2 (lower is better)
Translates to: ERQVGEHHPRVAASRAGLTPDAI*LSFGPV
Trigger: AACAGGGCCAAAGGAAAGGCATATGGCATCGGGGGT...TAGGCCGGCTCGGCTCGCCGCGACTCTGGGGTGGTGCTCGCCTACCTGCCTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418517.5
3UTR-3UTR CCA 90 bp AGGGAGAGAAAAGGAGTCCGTGGCGGAGTCTGTGCTTCTCATTCCAGCAGGCGCGAGGCGGGTGCCCGGTaGACACTCTCAGCAGCGCCC +
Preference number: 2 (lower is better)
Translates to: RERKGVRGGVCASHSSRREAGAR*TLSAAP
Trigger: GGGCGCTGCTGAGAGTGTCCACCGGGCACCCGCCTC...GCGCCTGCTGGAATGAGAAGCACAGACTCCGCCACGGACTCCTTTTCTCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
3UTR-3UTR TCA 90 bp AAGCCCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGAGGGTGGGGGAGAATTaGGGAGCTCGGAGAGGCAGG +
Preference number: 2 (lower is better)
Translates to: KPLVSICQGTEREGGRERRVGEN*GARRGR
Trigger: CCTGCCTCTCCGAGCTCCTCAATTCTCCCCCACCCT...CCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000355526.9
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
3UTR-3UTR CCA 90 bp GCCCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCGCGGGATGTTCAGGGTaGGGGAGAATTGAGGAGCTC +
Preference number: 2 (lower is better)
Translates to: APGVHLPRDREGGREGEAAGCSG*GRIEEL
Trigger: GAGCTCCTCAATTCTCCCCCACCCTGAACATCCCGC...GGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000355526.9
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
3UTR-3UTR CCA 90 bp CCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGAGGGGAGAAGCCCCTaGTGTCCATTTGCCAAGGGA +
Preference number: 2 (lower is better)
Translates to: PWCPFAKGQRGREGGRGPEGRSP*CPFAKG
Trigger: TCCCTTGGCAAATGGACACCAGGGGCTTCTCCCCTC...AGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000355526.9
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
3UTR-3UTR TCA 90 bp AGGGAGAGAAAAGGAGTCCGTGGCGGAGTCTGTGCTTCTCATTCCAGCAGGCGCAGGGTGGGGGAGAATTaGGGAGCTCGGAGAGGCAGG +
Preference number: 2 (lower is better)
Translates to: RERKGVRGGVCASHSSRRRVGEN*GARRGR
Trigger: CCTGCCTCTCCGAGCTCCTCAATTCTCCCCCACCCT...GCGCCTGCTGGAATGAGAAGCACAGACTCCGCCACGGACTCCTTTTCTCTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
3UTR-3UTR CCA 90 bp GCCCTGGCCGGGCCCACCCACCCACAGGGCAGACATTCCACTTGCACAGAGGGGCACCCAGCCAGGCCTTaGAGGACTCTTTGTATATAT +
Preference number: 2 (lower is better)
Translates to: ALAGPTHPQGRHSTCTEGHPARP*RTLCIY
Trigger: ATATATACAAAGAGTCCTCCAAGGCCTGGCTGGGTG...CCCCTCTGTGCAAGTGGAATGTCTGCCCTGTGGGTGGGTGGGCCCGGCCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
3UTR-3UTR GCA 90 bp AGAAAAGGAGTCCGTGGCGGAGTCTGTGCTTCTCATTCCAGCAGGCGCTGGGCGCCCCTGGTGTCCATTTaGCAAGGGACAGAGAGGGAG +
Preference number: 2 (lower is better)
Translates to: RKGVRGGVCASHSSRRWAPLVSI*QGTERE
Trigger: CTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGG...CGCCCAGCGCCTGCTGGAATGAGAAGCACAGACTCCGCCACGGACTCCTTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
3UTR-3UTR CCA 90 bp CCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGAGAAAAGGAGTCCGTaGCGGAGTCTGTGCTTCTCA +
Preference number: 2 (lower is better)
Translates to: PWCPFAKGQRGREGGRGPEKRSP*RSLCFS
Trigger: TGAGAAGCACAGACTCCGCCACGGACTCCTTTTCTC...AGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
3UTR-3UTR CCA 90 bp GTCACAGTAGCCGTTGGGGATGACAGTGCCGTCGGGCGCCTTCTTGGCTGTGTGCCCTGTTCTTCCTCCTaGGAATGTCATCCTCCAAGT +
Preference number: 2 (lower is better)
Translates to: VTVAVGDDSAVGRLLGCVPCSSS*ECHPPS
Trigger: ACTTGGAGGATGACATTCCCAGGAGGAAGAACAGGG...CACACAGCCAAGAAGGCGCCCGACGGCACTGTCATCCCCAACGGCTACTGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418517.5
3UTR-3UTR GCA 90 bp CTAGGTGAGGGTGATGTAAGCAGAAGCCTTTTCCTTCAGGTGCCGGAGACAGAGCCCCTGGTGTCCATTTaGCAAGGGACAGAGAGGGAG +
Preference number: 2 (lower is better)
Translates to: LGEGDVSRSLFLQVPETEPLVSI*QGTERE
Trigger: CTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGG...CTCTGTCTCCGGCACCTGAAGGAAAAGGCTTCTGCTTACATCACCCTCACCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418517.5
3UTR-3UTR CCA 90 bp ACCAAGGTTCACATCATGCAGTATCCACCGTGGGCACCAGGAGGGGCGGGTGGACACCCAGCCAGGCCTTaGAGGACTCTTTGTATATAT +
Preference number: 2 (lower is better)
Translates to: TKVHIMQYPPWAPGGAGGHPARP*RTLCIY
Trigger: ATATATACAAAGAGTCCTCCAAGGCCTGGCTGGGTG...TCCACCCGCCCCTCCTGGTGCCCACGGTGGATACTGCATGATGTGAACCTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
3UTR-3UTR GCA 90 bp TTTTTAAAACCCGAACAACAAACACACACAACCACAAGAAACAACCACGCCCCCCCGTGGCGGAGTCTGTaGTTCTCATTCCAGCAGGCG +
Preference number: 2 (lower is better)
Translates to: FLKPEQQTHTTTRNNHAPPWRSL*FSFQQA
Trigger: CGCCTGCTGGAATGAGAAGCACAGACTCCGCCACGG...GGGGGCGTGGTTGTTTCTTGTGGTTGTGTGTGTTTGTTGTTCGGGTTTTAAAAA
51% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
3UTR-3UTR GCA 90 bp CCTCCACCCAGCCAGGCCTTGGAGGACTCTTTGTATATATTAACTTCTTTTCTTCCCCTGGTGTCCATTTaGCAAGGGACAGAGAGGGAG +
Preference number: 2 (lower is better)
Translates to: PPPSQALEDSLYILTSFLPLVSI*QGTERE
Trigger: CTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGG...AAGAAAAGAAGTTAATATATACAAAGAGTCCTCCAAGGCCTGGCTGGGTGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
3UTR-3UTR GCA 90 bp TTTTTAAAACCCGAACAACAAACACACACAACCACAAGAAACAACCACGCCCCCCCAAGGTTCACATCATaGAGTATCCACCGTGGGCAC +
Preference number: 2 (lower is better)
Translates to: FLKPEQQTHTTTRNNHAPPRFTS*SIHRGH
Trigger: GTGCCCACGGTGGATACTGCATGATGTGAACCTTGG...GGGGGCGTGGTTGTTTCTTGTGGTTGTGTGTGTTTGTTGTTCGGGTTTTAAAAA
48% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
3UTR-3UTR CAA 90 bp ACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACCCACAGGCTGCAGCTCCAGAAATaGGGGTTGGGGCGCCCGGCG +
Preference number: 3 (lower is better)
Translates to: TEREGGRERPWPGPPTHRLQLQK*GLGRPA
Trigger: CGCCGGGCGCCCCAACCCCAATTTCTGGAGCTGCAG...CCTGTGGGTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
3UTR-3UTR CAA 90 bp AGTCTGTGCTTCTCATTCCAGCAGGCGCTGGGCGGGGGCCCACCCGGCCCCACCCTGCAGCTCCAGAAATaGGGGTTGGGGCGCCCGGCG +
Preference number: 3 (lower is better)
Translates to: SLCFSFQQALGGGPPGPTLQLQK*GLGRPA
Trigger: CGCCGGGCGCCCCAACCCCAATTTCTGGAGCTGCAG...GGTGGGGCCGGGTGGGCCCCCGCCCAGCGCCTGCTGGAATGAGAAGCACAGACT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
3UTR CCA 72 bp GCCCTGGGCACAAGAGGGGAAGGCGCCCACCTTGGGTaGGGCGCGGGACGGCTGCAGCTCCAGAAATTGGGG +
Preference number: 3 (lower is better)
Translates to: ALGTRGEGAHLG*GAGRLQLQKLG
Trigger: CCCCAATTTCTGGAGCTGCAGCCGTCCCGCGCCCCACCCAAGGTGGGCGCCTTCCCCTCTTGTGCCCAGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
3UTR-3UTR CAA 90 bp TGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCGGGCAGACATTCCACTaGCACAGAGGGGAGGGGGTG +
Preference number: 3 (lower is better)
Translates to: CQGTEREGGRERPWPGPPGQTFH*HRGEGV
Trigger: CACCCCCTCCCCTCTGTGCAAGTGGAATGTCTGCCC...GGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000355526.9
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
3UTR-3UTR CAA 90 bp CCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACGGGCAGACATTCCACTaGCACAGAGGGGAGGGGGTG +
Preference number: 3 (lower is better)
Translates to: PRDREGGREGEALAGPTHGQTFH*HRGEGV
Trigger: CACCCCCTCCCCTCTGTGCAAGTGGAATGTCTGCCC...GTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000355526.9
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
3UTR CCA 72 bp CAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTaGCCGGGCCCACCCACCCACAGGGCAGACATTCCA +
Preference number: 3 (lower is better)
Translates to: QGTEREGGRERP*PGPPTHRADIP
Trigger: TGGAATGTCTGCCCTGTGGGTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000355526.9
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
3UTR-3UTR CAA 90 bp CCCGGTGGACACTCTCAGCAGCGCCCCTCCACCCAGCCAGGCCTTGGAGGACTCGGGCAGACATTCCACTaGCACAGAGGGGAGGGGGTG +
Preference number: 3 (lower is better)
Translates to: PGGHSQQRPSTQPGLGGLGQTFH*HRGEGV
Trigger: CACCCCCTCCCCTCTGTGCAAGTGGAATGTCTGCCC...GAGTCCTCCAAGGCCTGGCTGGGTGGAGGGGCGCTGCTGAGAGTGTCCACCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
3UTR-3UTR CAA 90 bp CGGGTGCCCGGTGGACACTCTCAGCAGCGCCCCTCCACCCAGCCAGGCCTTGGAGCCCCTGGTGTCCATTaGCCAAGGGACAGAGAGGGA +
Preference number: 3 (lower is better)
Translates to: RVPGGHSQQRPSTQPGLGAPGVH*PRDREG
Trigger: TCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGGC...TCCAAGGCCTGGCTGGGTGGAGGGGCGCTGCTGAGAGTGTCCACCGGGCACCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
3UTR-3UTR CAA 90 bp GCCCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCGGGCAGACATTCCACTaGCACAGAGGGGAGGGGGTG +
Preference number: 3 (lower is better)
Translates to: APGVHLPRDREGGREGEAGQTFH*HRGEGV
Trigger: CACCCCCTCCCCTCTGTGCAAGTGGAATGTCTGCCC...GGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000355526.9
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
3UTR GCA 72 bp GAGGAGGGAGAGAAAAGGAGTCCGTGGCGGAGTCTGTaGTTCTCATTCCAGCAGGCGCTGGGCGGGGGCCCA +
Preference number: 3 (lower is better)
Translates to: EEGEKRSPWRSL*FSFQQALGGGP
Trigger: TGGGCCCCCGCCCAGCGCCTGCTGGAATGAGAAGCACAGACTCCGCCACGGACTCCTTTTCTCTCCCTCCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
3UTR-3UTR CAA 90 bp CCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGGCAGACATTCCACTaGCACAGAGGGGAGGGGGTG +
Preference number: 3 (lower is better)
Translates to: PWCPFAKGQRGREGGRGPGQTFH*HRGEGV
Trigger: CACCCCCTCCCCTCTGTGCAAGTGGAATGTCTGCCC...AGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000355526.9
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
3UTR-3UTR CAA 90 bp CGGGTGGACACCACGCCCACCGCCCTGGGCACAAGAGGGGAAGGCGCCCACCTTCCACCCAGCCAGGCCTaGGAGGACTCTTTGTATATA +
Preference number: 3 (lower is better)
Translates to: RVDTTPTALGTRGEGAHLPPSQA*EDSLYI
Trigger: TATATACAAAGAGTCCTCCAAGGCCTGGCTGGGTGG...AAGGTGGGCGCCTTCCCCTCTTGTGCCCAGGGCGGTGGGCGTGGTGTCCACCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
3UTR-3UTR CAA 90 bp CCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGCCCCTGGTGTCCATTaGCCAAGGGACAGAGAGGGA +
Preference number: 3 (lower is better)
Translates to: PWCPFAKGQRGREGGRGPAPGVH*PRDREG
Trigger: TCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGGC...AGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000355526.9
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
3UTR CCA 72 bp TGTTTATGGTTGTTTTTCCGGTGGAAGGGCAGGGCGTaGCGTTCGGCGTTCTCCTCCCCCTCCTCCTCGGCC +
Preference number: 3 (lower is better)
Translates to: CLWLFFRWKGRA*RSAFSSPSSSA
Trigger: GGCCGAGGAGGAGGGGGAGGAGAACGCCGAACGCCACGCCCTGCCCTTCCACCGGAAAAACAACCATAAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000418517.5
3UTR-3UTR CAA 90 bp AGAAAAGGAGTCCGTGGCGGAGTCTGTGCTTCTCATTCCAGCAGGCGCTGGGCGGCCCCTGGTGTCCATTaGCCAAGGGACAGAGAGGGA +
Preference number: 3 (lower is better)
Translates to: RKGVRGGVCASHSSRRWAAPGVH*PRDREG
Trigger: TCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGGC...CGCCCAGCGCCTGCTGGAATGAGAAGCACAGACTCCGCCACGGACTCCTTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
3UTR CCA 72 bp TACGGCTTGTCTCGGTCCTCCAGGGAAGCGGTGTCCTaGCGTTTCCGGAGACCCCCGATGCCATATGCCTTT +
Preference number: 3 (lower is better)
Translates to: YGLSRSSREAVS*RFRRPPMPYAF
Trigger: AAAGGCATATGGCATCGGGGGTCTCCGGAAACGCCAGGACACCGCTTCCCTGGAGGACCGAGACAAGCCGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418517.5
3UTR-3UTR CAA 90 bp CCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTCCACCCAGCCAGGCCTaGGAGGACTCTTTGTATATA +
Preference number: 3 (lower is better)
Translates to: PWCPFAKGQRGREGGRGPPPSQA*EDSLYI
Trigger: TATATACAAAGAGTCCTCCAAGGCCTGGCTGGGTGG...AGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
3UTR TCA 72 bp AGCGGTAGGTCCGCACGGCTGCCGTCATGTTCACCGTaGATTGTAAACACGAGGGGTGTCCTGATCGCCCAC +
Preference number: 3 (lower is better)
Translates to: SGRSARLPSCSP*IVNTRGVLIAH
Trigger: GTGGGCGATCAGGACACCCCTCGTGTTTACAATTCACGGTGAACATGACGGCAGCCGTGCGGACCTACCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418517.5
3UTR-3UTR CAA 90 bp ACCAAGGTTCACATCATGCAGTATCCACCGTGGGCACCAGGAGGGGCGGGTGGACCACCCAGCCAGGCCTaGGAGGACTCTTTGTATATA +
Preference number: 3 (lower is better)
Translates to: TKVHIMQYPPWAPGGAGGPPSQA*EDSLYI
Trigger: TATATACAAAGAGTCCTCCAAGGCCTGGCTGGGTGG...TCCACCCGCCCCTCCTGGTGCCCACGGTGGATACTGCATGATGTGAACCTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
3UTR GCA 72 bp GGGCAGGAACAGAGTTCAAAACCAAGGTTCACATCATaGAGTATCCACCGTGGGCACCAGGAGGGGCGGGTG +
Preference number: 3 (lower is better)
Translates to: GQEQSSKPRFTS*SIHRGHQEGRV
Trigger: CACCCGCCCCTCCTGGTGCCCACGGTGGATACTGCATGATGTGAACCTTGGTTTTGAACTCTGTTCCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
3UTR GCA 72 bp GCCGTCGGGCGCCTTCTTGGCTGTGTGTTTCCTTTGTaGCTCAGGGACCCAGGCCAATTCTTTGTAAAACTG +
Preference number: 3 (lower is better)
Translates to: AVGRLLGCVFPL*LRDPGQFFVKL
Trigger: CAGTTTTACAAAGAATTGGCCTGGGTCCCTGAGGCACAAAGGAAACACACAGCCAAGAAGGCGCCCGACGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418517.5
3UTR TCA 72 bp AATTCACAGCAGAGGCAGGCAATAGAGGAGACTCGGTaGCAAGTGAGGGGGCACTCCTGGATTAGGGGACAT +
Preference number: 3 (lower is better)
Translates to: NSQQRQAIEETR*QVRGHSWIRGH
Trigger: ATGTCCCCTAATCCAGGAGTGCCCCCTCACTTGTCACCGAGTCTCCTCTATTGCCTGCCTCTGCTGTGAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR GCA 90 bp CTCGGAGAGGCAGGTAGGCGAGCACCACCCCAGAGTCGCGGCGAGCCGAGCCGGAGGGCAGTCGCAGGCTaGGCTCGGCGCACAGGCGCG +
Preference number: 4 (lower is better)
Translates to: LGEAGRRAPPQSRGEPSRRAVAG*ARRTGA
Trigger: CGCGCCTGTGCGCCGAGCGCAGCCTGCGACTGCCCT...CCGGCTCGGCTCGCCGCGACTCTGGGGTGGTGCTCGCCTACCTGCCTCTCCGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR GCA 90 bp CAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACCCACAGGGGCCGGCAGAGGCGGGTaGCCGGTGGACACTCTCAGC +
Preference number: 4 (lower is better)
Translates to: QRGREGGRGPGRAHPPTGAGRGG*PVDTLS
Trigger: GCTGAGAGTGTCCACCGGGCACCCGCCTCTGCCGGC...CCCTGTGGGTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CCA 90 bp AGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACCCAACCAGGAGGGGCGGGTaGACACCACGCCCACCGCCC +
Preference number: 4 (lower is better)
Translates to: RDREGGREGEALAGPTHPTRRGG*TPRPPP
Trigger: GGGCGGTGGGCGTGGTGTCCACCCGCCCCTCCTGGT...TGGGTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CCA 90 bp AGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACCCAGAATGGCGGTGGCCATaGCCCGCTCGGCTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: RDREGGREGEALAGPTHPEWRWP*PARLGR
Trigger: GCGGCCCAGCCGAGCGGGCCATGGCCACCGCCATTC...TGGGTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000418517.5
ENST00000456296.5
CDS-3UTR CCA 90 bp ACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACCCACAGGGAATGGCGGTGGCCATaGCCCGCTCGGCTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: TEREGGRERPWPGPPTHREWRWP*PARLGR
Trigger: GCGGCCCAGCCGAGCGGGCCATGGCCACCGCCATTC...CCTGTGGGTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000418517.5
ENST00000456296.5
CDS-3UTR GCA 90 bp AGTCTGTGCTTCTCATTCCAGCAGGCGCTGGGCGGGGGCCCACCCGGCCCCACCAGGGCAGTCGCAGGCTaGGCTCGGCGCACAGGCGCG +
Preference number: 4 (lower is better)
Translates to: SLCFSFQQALGGGPPGPTRAVAG*ARRTGA
Trigger: CGCGCCTGTGCGCCGAGCGCAGCCTGCGACTGCCCT...GGTGGGGCCGGGTGGGCCCCCGCCCAGCGCCTGCTGGAATGAGAAGCACAGACT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR GCA 90 bp GAGAGGCAGGTAGGCGAGCACCACCCCAGAGTCGCGGCGAGCCGAGCCGGCCTAAGGGCAGTCGCAGGCTaGGCTCGGCGCACAGGCGCG +
Preference number: 4 (lower is better)
Translates to: ERQVGEHHPRVAASRAGLRAVAG*ARRTGA
Trigger: CGCGCCTGTGCGCCGAGCGCAGCCTGCGACTGCCCT...TAGGCCGGCTCGGCTCGCCGCGACTCTGGGGTGGTGCTCGCCTACCTGCCTCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418517.5
CDS-3UTR CCA 90 bp AGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACCCAGAGGCGGGTGCCCGGTaGACACTCTCAGCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: RDREGGREGEALAGPTHPEAGAR*TLSAAP
Trigger: GGGCGCTGCTGAGAGTGTCCACCGGGCACCCGCCTC...TGGGTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CCA 90 bp CGGGTGGACACCACGCCCACCGCCCTGGGCACAAGAGGGGAAGGCGCCCACCTTGGAAGGCGCCCACCTTaGGTGGGGCGCGGGACGGCT +
Preference number: 4 (lower is better)
Translates to: RVDTTPTALGTRGEGAHLGRRPP*VGRGTA
Trigger: AGCCGTCCCGCGCCCCACCCAAGGTGGGCGCCTTCC...AAGGTGGGCGCCTTCCCCTCTTGTGCCCAGGGCGGTGGGCGTGGTGTCCACCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR TCA 90 bp CAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACCCACAGGGAGTCCGCACAGGAGATaGGGTCCTCGGGACACCCCG +
Preference number: 4 (lower is better)
Translates to: QRGREGGRGPGRAHPPTGSPHRR*GPRDTP
Trigger: CGGGGTGTCCCGAGGACCTCATCTCCTGTGCGGACT...CCCTGTGGGTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR CCA 90 bp AGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACCCACCGGGGGCTCCGCCATaGGGGGACTCAGGCAGTACA +
Preference number: 4 (lower is better)
Translates to: RDREGGREGEALAGPTHPPGAPP*GDSGST
Trigger: TGTACTGCCTGAGTCCCCCCATGGCGGAGCCCCCGG...TGGGTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR CCA 90 bp CCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACCCGGGGGCTCCGCCATaGGGGGACTCAGGCAGTACA +
Preference number: 4 (lower is better)
Translates to: PRDREGGREGEALAGPTHPGAPP*GDSGST
Trigger: TGTACTGCCTGAGTCCCCCCATGGCGGAGCCCCCGG...GTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR CCA 90 bp CGGGTGGACACCACGCCCACCGCCCTGGGCACAAGAGGGGAAGGCGCCCACCTTGAGGCGGGTGCCCGGTaGACACTCTCAGCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: RVDTTPTALGTRGEGAHLEAGAR*TLSAAP
Trigger: GGGCGCTGCTGAGAGTGTCCACCGGGCACCCGCCTC...AAGGTGGGCGCCTTCCCCTCTTGTGCCCAGGGCGGTGGGCGTGGTGTCCACCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CCA 90 bp CGGGTGCCCGGTGGACACTCTCAGCAGCGCCCCTCCACCCAGCCAGGCCTTGGACCACGCCCACCGCCCTaGGCACAAGAGGGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: RVPGGHSQQRPSTQPGLGPRPPP*AQEGKA
Trigger: CGCCTTCCCCTCTTGTGCCCAGGGCGGTGGGCGTGG...TCCAAGGCCTGGCTGGGTGGAGGGGCGCTGCTGAGAGTGTCCACCGGGCACCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CCA 90 bp CCCGGTGGACACTCTCAGCAGCGCCCCTCCACCCAGCCAGGCCTTGGAGGACTCACCAGGAGGGGCGGGTaGACACCACGCCCACCGCCC +
Preference number: 4 (lower is better)
Translates to: PGGHSQQRPSTQPGLGGLTRRGG*TPRPPP
Trigger: GGGCGGTGGGCGTGGTGTCCACCCGCCCCTCCTGGT...GAGTCCTCCAAGGCCTGGCTGGGTGGAGGGGCGCTGCTGAGAGTGTCCACCGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CCA 90 bp CAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACCCACAGGGGGTTCTGAATGGCGGTaGCCATGGCCCGCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: QRGREGGRGPGRAHPPTGGSEWR*PWPARL
Trigger: CAGCCGAGCGGGCCATGGCCACCGCCATTCAGAACC...CCCTGTGGGTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000418517.5
ENST00000456296.5
CDS-3UTR TCA 90 bp TGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCAGTAGCCGTTGGGGATaGCAGTGCCGTCGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: CQGTEREGGRERPWPGPPSSRWG*QCRRAP
Trigger: AGGCGCCCGACGGCACTGTCATCCCCAACGGCTACT...GGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR TCA 90 bp ACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACCCACAGGAGTAGCCGTTGGGGATaGCAGTGCCGTCGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: TEREGGRERPWPGPPTHRSSRWG*QCRRAP
Trigger: AGGCGCCCGACGGCACTGTCATCCCCAACGGCTACT...CCTGTGGGTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR TCA 90 bp CGGCAGAGGCGGGTGCCCGGTGGACACTCTCAGCAGCGCCCCTCCACCCAGCCAAGTCCGCACAGGAGATaGGGTCCTCGGGACACCCCG +
Preference number: 4 (lower is better)
Translates to: RQRRVPGGHSQQRPSTQPSPHRR*GPRDTP
Trigger: CGGGGTGTCCCGAGGACCTCATCTCCTGTGCGGACT...TGGCTGGGTGGAGGGGCGCTGCTGAGAGTGTCCACCGGGCACCCGCCTCTGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR TCA 90 bp GCCCTGGCCGGGCCCACCCACCCACAGGGCAGACATTCCACTTGCACAGAGGGGCGGTCGGGCGGGCGCTaGGGCCGCCCATCCATTCAT +
Preference number: 4 (lower is better)
Translates to: ALAGPTHPQGRHSTCTEGRSGGR*GRPSIH
Trigger: ATGAATGGATGGGCGGCCTCAGCGCCCGCCCGACCG...CCCCTCTGTGCAAGTGGAATGTCTGCCCTGTGGGTGGGTGGGCCCGGCCAGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420980.7
ENST00000614244.4
CDS-3UTR GCA 90 bp ATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCAAGGGCAGTCGCAGGCTaGGCTCGGCGCACAGGCGCG +
Preference number: 4 (lower is better)
Translates to: ICQGTEREGGRERPWPGPRAVAG*ARRTGA
Trigger: CGCGCCTGTGCGCCGAGCGCAGCCTGCGACTGCCCT...TGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAAT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR GCA 90 bp CTCGGAGAGGCAGGTAGGCGAGCACCACCCCAGAGTCGCGGCGAGCCGAGCCGGTGGGCCACGCCGGTCTaGGAGTCGAGGAAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: LGEAGRRAPPQSRGEPSRWATPV*ESRKGS
Trigger: ACTGCCCTTCCTCGACTCGCAGACCGGCGTGGCCCA...CCGGCTCGGCTCGCCGCGACTCTGGGGTGGTGCTCGCCTACCTGCCTCTCCGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR GCA 90 bp AGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACCCATGGGCCACGCCGGTCTaGGAGTCGAGGAAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: RDREGGREGEALAGPTHPWATPV*ESRKGS
Trigger: ACTGCCCTTCCTCGACTCGCAGACCGGCGTGGCCCA...TGGGTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR GCA 90 bp CCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACTGGGCCACGCCGGTCTaGGAGTCGAGGAAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: PRDREGGREGEALAGPTHWATPV*ESRKGS
Trigger: ACTGCCCTTCCTCGACTCGCAGACCGGCGTGGCCCA...GTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR GCA 90 bp TGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCTGGGCCACGCCGGTCTaGGAGTCGAGGAAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: CQGTEREGGRERPWPGPPWATPV*ESRKGS
Trigger: ACTGCCCTTCCTCGACTCGCAGACCGGCGTGGCCCA...GGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR GCA 90 bp CCCGGTGGACACTCTCAGCAGCGCCCCTCCACCCAGCCAGGCCTTGGAGGACTCGCCGGCAGAGGCGGGTaGCCGGTGGACACTCTCAGC +
Preference number: 4 (lower is better)
Translates to: PGGHSQQRPSTQPGLGGLAGRGG*PVDTLS
Trigger: GCTGAGAGTGTCCACCGGGCACCCGCCTCTGCCGGC...GAGTCCTCCAAGGCCTGGCTGGGTGGAGGGGCGCTGCTGAGAGTGTCCACCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR GCA 90 bp CGGAGTCTGTGCTTCTCATTCCAGCAGGCGCTGGGCGGGGGCCCACCCGGCCCCGGGGCGCGGGACGGCTaGAGCTCCAGAAATTGGGGT +
Preference number: 4 (lower is better)
Translates to: RSLCFSFQQALGGGPPGPGARDG*SSRNWG
Trigger: ACCCCAATTTCTGGAGCTGCAGCCGTCCCGCGCCCC...GGGGCCGGGTGGGCCCCCGCCCAGCGCCTGCTGGAATGAGAAGCACAGACTCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR GCA 90 bp TGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCGGGGCGCGGGACGGCTaGAGCTCCAGAAATTGGGGT +
Preference number: 4 (lower is better)
Translates to: CQGTEREGGRERPWPGPPGARDG*SSRNWG
Trigger: ACCCCAATTTCTGGAGCTGCAGCCGTCCCGCGCCCC...GGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CCA 90 bp AGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACCCAAGGGAAGCGGTGTCCTaGCGTTTCCGGAGACCCCCG +
Preference number: 4 (lower is better)
Translates to: RDREGGREGEALAGPTHPREAVS*RFRRPP
Trigger: CGGGGGTCTCCGGAAACGCCAGGACACCGCTTCCCT...TGGGTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR CCA 90 bp CTCGGAGAGGCAGGTAGGCGAGCACCACCCCAGAGTCGCGGCGAGCCGAGCCGGAGGGAAGCGGTGTCCTaGCGTTTCCGGAGACCCCCG +
Preference number: 4 (lower is better)
Translates to: LGEAGRRAPPQSRGEPSRREAVS*RFRRPP
Trigger: CGGGGGTCTCCGGAAACGCCAGGACACCGCTTCCCT...CCGGCTCGGCTCGCCGCGACTCTGGGGTGGTGCTCGCCTACCTGCCTCTCCGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR CCA 90 bp GAGGCGGGTGCCCGGTGGACACTCTCAGCAGCGCCCCTCCACCCAGCCAGGCCTAGGGAAGCGGTGTCCTaGCGTTTCCGGAGACCCCCG +
Preference number: 4 (lower is better)
Translates to: EAGARWTLSAAPLHPARPREAVS*RFRRPP
Trigger: CGGGGGTCTCCGGAAACGCCAGGACACCGCTTCCCT...AGGCCTGGCTGGGTGGAGGGGCGCTGCTGAGAGTGTCCACCGGGCACCCGCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CCA 90 bp CCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACAGGGAAGCGGTGTCCTaGCGTTTCCGGAGACCCCCG +
Preference number: 4 (lower is better)
Translates to: PRDREGGREGEALAGPTHREAVS*RFRRPP
Trigger: CGGGGGTCTCCGGAAACGCCAGGACACCGCTTCCCT...GTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR CCA 90 bp CCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACTGGAAGGGCAGGGCGTaGCGTTCGGCGTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PRDREGGREGEALAGPTHWKGRA*RSAFSS
Trigger: GGAGGAGAACGCCGAACGCCACGCCCTGCCCTTCCA...GTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000456296.5
ENST00000614244.4
CDS-3UTR CCA 90 bp GAGGCGGGTGCCCGGTGGACACTCTCAGCAGCGCCCCTCCACCCAGCCAGGCCTTGCAGCTCCAGAAATTaGGGTTGGGGCGCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: EAGARWTLSAAPLHPARPCSSRN*GWGARR
Trigger: CCGCCGGGCGCCCCAACCCCAATTTCTGGAGCTGCA...AGGCCTGGCTGGGTGGAGGGGCGCTGCTGAGAGTGTCCACCGGGCACCCGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CCA 90 bp AGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACCCATGCAGCTCCAGAAATTaGGGTTGGGGCGCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: RDREGGREGEALAGPTHPCSSRN*GWGARR
Trigger: CCGCCGGGCGCCCCAACCCCAATTTCTGGAGCTGCA...TGGGTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR TCA 90 bp CGGGTGGACACCACGCCCACCGCCCTGGGCACAAGAGGGGAAGGCGCCCACCTTAGTAGCCGTTGGGGATaGCAGTGCCGTCGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: RVDTTPTALGTRGEGAHLSSRWG*QCRRAP
Trigger: AGGCGCCCGACGGCACTGTCATCCCCAACGGCTACT...AAGGTGGGCGCCTTCCCCTCTTGTGCCCAGGGCGGTGGGCGTGGTGTCCACCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR TCA 90 bp GAGAGGCAGGTAGGCGAGCACCACCCCAGAGTCGCGGCGAGCCGAGCCGGCCTAAGTCCGCACAGGAGATaGGGTCCTCGGGACACCCCG +
Preference number: 4 (lower is better)
Translates to: ERQVGEHHPRVAASRAGLSPHRR*GPRDTP
Trigger: CGGGGTGTCCCGAGGACCTCATCTCCTGTGCGGACT...TAGGCCGGCTCGGCTCGCCGCGACTCTGGGGTGGTGCTCGCCTACCTGCCTCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418517.5
CDS-3UTR TCA 90 bp ACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACCCACAGGGACTTGAGCGGGTTCTaGATGGCGGTGGCCATGGCC +
Preference number: 4 (lower is better)
Translates to: TEREGGRERPWPGPPTHRDLSGF*MAVAMA
Trigger: GGCCATGGCCACCGCCATTCAGAACCCGCTCAAGTC...CCTGTGGGTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000418517.5
ENST00000456296.5
CDS-3UTR TCA 90 bp CTCGGAGAGGCAGGTAGGCGAGCACCACCCCAGAGTCGCGGCGAGCCGAGCCGGGACTTGAGCGGGTTCTaGATGGCGGTGGCCATGGCC +
Preference number: 4 (lower is better)
Translates to: LGEAGRRAPPQSRGEPSRDLSGF*MAVAMA
Trigger: GGCCATGGCCACCGCCATTCAGAACCCGCTCAAGTC...CCGGCTCGGCTCGCCGCGACTCTGGGGTGGTGCTCGCCTACCTGCCTCTCCGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000418517.5
ENST00000456296.5
CDS-3UTR TCA 90 bp ACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACCCACAGGCCTCGCCTAGGGACTTaGGCGGGTTCTGAATGGCGG +
Preference number: 4 (lower is better)
Translates to: TEREGGRERPWPGPPTHRPRLGT*AGSEWR
Trigger: CCGCCATTCAGAACCCGCTCAAGTCCCTAGGCGAGG...CCTGTGGGTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416611.5
ENST00000456296.5
CDS-3UTR TCA 90 bp CTCGGAGAGGCAGGTAGGCGAGCACCACCCCAGAGTCGCGGCGAGCCGAGCCGGCCTCGCCTAGGGACTTaGGCGGGTTCTGAATGGCGG +
Preference number: 4 (lower is better)
Translates to: LGEAGRRAPPQSRGEPSRPRLGT*AGSEWR
Trigger: CCGCCATTCAGAACCCGCTCAAGTCCCTAGGCGAGG...CCGGCTCGGCTCGCCGCGACTCTGGGGTGGTGCTCGCCTACCTGCCTCTCCGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416611.5
ENST00000456296.5
CDS-3UTR GCA 90 bp CGGCAGAGGCGGGTGCCCGGTGGACACTCTCAGCAGCGCCCCTCCACCCAGCCAGGCGCGCGTTGTAACTaGGGCAGTGCTCGATGGCCT +
Preference number: 4 (lower is better)
Translates to: RQRRVPGGHSQQRPSTQPGARCN*GSARWP
Trigger: AGGCCATCGAGCACTGCCGCAGTTACAACGCGCGCC...TGGCTGGGTGGAGGGGCGCTGCTGAGAGTGTCCACCGGGCACCCGCCTCTGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR GCA 90 bp ACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACCCACAGGGGCGCGCGTTGTAACTaGGGCAGTGCTCGATGGCCT +
Preference number: 4 (lower is better)
Translates to: TEREGGRERPWPGPPTHRGARCN*GSARWP
Trigger: AGGCCATCGAGCACTGCCGCAGTTACAACGCGCGCC...CCTGTGGGTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR GCA 90 bp ACCCACCCACAGGGCAGACATTCCACTTGCACAGAGGGGAGGGGGTGGCCCAGCAGGGCAGTCGCAGGCTaGGCTCGGCGCACAGGCGCG +
Preference number: 4 (lower is better)
Translates to: THPQGRHSTCTEGRGWPSRAVAG*ARRTGA
Trigger: CGCGCCTGTGCGCCGAGCGCAGCCTGCGACTGCCCT...GCTGGGCCACCCCCTCCCCTCTGTGCAAGTGGAATGTCTGCCCTGTGGGTGGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR GCA 90 bp CGGGTGGACACCACGCCCACCGCCCTGGGCACAAGAGGGGAAGGCGCCCACCTTTGGGCCACGCCGGTCTaGGAGTCGAGGAAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: RVDTTPTALGTRGEGAHLWATPV*ESRKGS
Trigger: ACTGCCCTTCCTCGACTCGCAGACCGGCGTGGCCCA...AAGGTGGGCGCCTTCCCCTCTTGTGCCCAGGGCGGTGGGCGTGGTGTCCACCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR GCA 90 bp AGTCTGTGCTTCTCATTCCAGCAGGCGCTGGGCGGGGGCCCACCCGGCCCCACCTGGGCCACGCCGGTCTaGGAGTCGAGGAAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: SLCFSFQQALGGGPPGPTWATPV*ESRKGS
Trigger: ACTGCCCTTCCTCGACTCGCAGACCGGCGTGGCCCA...GGTGGGGCCGGGTGGGCCCCCGCCCAGCGCCTGCTGGAATGAGAAGCACAGACT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR GCA 90 bp CAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACCCACAGGGCCGTGGCGGAGTCTGTaGTTCTCATTCCAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: QRGREGGRGPGRAHPPTGPWRSL*FSFQQA
Trigger: CGCCTGCTGGAATGAGAAGCACAGACTCCGCCACGG...CCCTGTGGGTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CCA 90 bp GCACAAGAGGGGAAGGCGCCCACCTTGGGTGGGGCGCGGGACGGCTGCAGCTCCATGCAGTATCCACCGTaGGCACCAGGAGGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: AQEGKAPTLGGARDGCSSMQYPP*APGGAG
Trigger: ACCCGCCCCTCCTGGTGCCCACGGTGGATACTGCAT...GGAGCTGCAGCCGTCCCGCGCCCCACCCAAGGTGGGCGCCTTCCCCTCTTGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR TCA 90 bp GCCCTGGCCGGGCCCACCCACCCACAGGGCAGACATTCCACTTGCACAGAGGGGAGTAGCCGTTGGGGATaGCAGTGCCGTCGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: ALAGPTHPQGRHSTCTEGSSRWG*QCRRAP
Trigger: AGGCGCCCGACGGCACTGTCATCCCCAACGGCTACT...CCCCTCTGTGCAAGTGGAATGTCTGCCCTGTGGGTGGGTGGGCCCGGCCAGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR TCA 90 bp CCCGGTGGACACTCTCAGCAGCGCCCCTCCACCCAGCCAGGCCTTGGAGGACTCAGTCCGCACAGGAGATaGGGTCCTCGGGACACCCCG +
Preference number: 4 (lower is better)
Translates to: PGGHSQQRPSTQPGLGGLSPHRR*GPRDTP
Trigger: CGGGGTGTCCCGAGGACCTCATCTCCTGTGCGGACT...GAGTCCTCCAAGGCCTGGCTGGGTGGAGGGGCGCTGCTGAGAGTGTCCACCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR GCA 90 bp GAGAGGCAGGTAGGCGAGCACCACCCCAGAGTCGCGGCGAGCCGAGCCGGCCTAGGCGCGCGTTGTAACTaGGGCAGTGCTCGATGGCCT +
Preference number: 4 (lower is better)
Translates to: ERQVGEHHPRVAASRAGLGARCN*GSARWP
Trigger: AGGCCATCGAGCACTGCCGCAGTTACAACGCGCGCC...TAGGCCGGCTCGGCTCGCCGCGACTCTGGGGTGGTGCTCGCCTACCTGCCTCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418517.5
CDS-3UTR GCA 90 bp CCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTAGGGCAGTCGCAGGCTaGGCTCGGCGCACAGGCGCG +
Preference number: 4 (lower is better)
Translates to: PWCPFAKGQRGREGGRGPRAVAG*ARRTGA
Trigger: CGCGCCTGTGCGCCGAGCGCAGCCTGCGACTGCCCT...AGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR GCA 90 bp AGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACCCAAAAAGGCTCTGTCCATaGCCCTGGCTGGCACCCACC +
Preference number: 4 (lower is better)
Translates to: RDREGGREGEALAGPTHPKRLCP*PWLAPT
Trigger: GGTGGGTGCCAGCCAGGGGCATGGACAGAGCCTTTT...TGGGTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR GCA 90 bp CGGCAGAGGCGGGTGCCCGGTGGACACTCTCAGCAGCGCCCCTCCACCCAGCCAAAAAGGCTCTGTCCATaGCCCTGGCTGGCACCCACC +
Preference number: 4 (lower is better)
Translates to: RQRRVPGGHSQQRPSTQPKRLCP*PWLAPT
Trigger: GGTGGGTGCCAGCCAGGGGCATGGACAGAGCCTTTT...TGGCTGGGTGGAGGGGCGCTGCTGAGAGTGTCCACCGGGCACCCGCCTCTGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR GCA 90 bp CCCGGTGGACACTCTCAGCAGCGCCCCTCCACCCAGCCAGGCCTTGGAGGACTCGGGGCGCGGGACGGCTaGAGCTCCAGAAATTGGGGT +
Preference number: 4 (lower is better)
Translates to: PGGHSQQRPSTQPGLGGLGARDG*SSRNWG
Trigger: ACCCCAATTTCTGGAGCTGCAGCCGTCCCGCGCCCC...GAGTCCTCCAAGGCCTGGCTGGGTGGAGGGGCGCTGCTGAGAGTGTCCACCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CCA 90 bp ACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACCCACAGGTGCGGCAGTGCTCGATaGCCTCGCGGTAGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: TEREGGRERPWPGPPTHRCGSAR*PRGRSP
Trigger: AGGACTTCTACCGCGAGGCCATCGAGCACTGCCGCA...CCTGTGGGTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR CCA 90 bp GCCCTGGCCGGGCCCACCCACCCACAGGGCAGACATTCCACTTGCACAGAGGGGTGGAAGGGCAGGGCGTaGCGTTCGGCGTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: ALAGPTHPQGRHSTCTEGWKGRA*RSAFSS
Trigger: GGAGGAGAACGCCGAACGCCACGCCCTGCCCTTCCA...CCCCTCTGTGCAAGTGGAATGTCTGCCCTGTGGGTGGGTGGGCCCGGCCAGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000456296.5
ENST00000614244.4
CDS-3UTR CCA 90 bp CCCGGTGGACACTCTCAGCAGCGCCCCTCCACCCAGCCAGGCCTTGGAGGACTCTGGAAGGGCAGGGCGTaGCGTTCGGCGTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PGGHSQQRPSTQPGLGGLWKGRA*RSAFSS
Trigger: GGAGGAGAACGCCGAACGCCACGCCCTGCCCTTCCA...GAGTCCTCCAAGGCCTGGCTGGGTGGAGGGGCGCTGCTGAGAGTGTCCACCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000614244.4
CDS-3UTR CCA 90 bp GCCCACCTTGGGTGGGGCGCGGGACGGCTGCAGCTCCAGAAATTGGGGTTGGGGTGGAAGGGCAGGGCGTaGCGTTCGGCGTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: AHLGWGAGRLQLQKLGLGWKGRA*RSAFSS
Trigger: GGAGGAGAACGCCGAACGCCACGCCCTGCCCTTCCA...CCCCAACCCCAATTTCTGGAGCTGCAGCCGTCCCGCGCCCCACCCAAGGTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000614244.4
CDS-3UTR CCA 90 bp ACCCACCCACAGGGCAGACATTCCACTTGCACAGAGGGGAGGGGGTGGCCCAGCCCACGCCCACCGCCCTaGGCACAAGAGGGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: THPQGRHSTCTEGRGWPSPRPPP*AQEGKA
Trigger: CGCCTTCCCCTCTTGTGCCCAGGGCGGTGGGCGTGG...GCTGGGCCACCCCCTCCCCTCTGTGCAAGTGGAATGTCTGCCCTGTGGGTGGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CCA 90 bp AGTCTGTGCTTCTCATTCCAGCAGGCGCTGGGCGGGGGCCCACCCGGCCCCACCATGCAGTATCCACCGTaGGCACCAGGAGGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: SLCFSFQQALGGGPPGPTMQYPP*APGGAG
Trigger: ACCCGCCCCTCCTGGTGCCCACGGTGGATACTGCAT...GGTGGGGCCGGGTGGGCCCCCGCCCAGCGCCTGCTGGAATGAGAAGCACAGACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR TCA 90 bp ATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCAAGTCCGCACAGGAGATaGGGTCCTCGGGACACCCCG +
Preference number: 4 (lower is better)
Translates to: ICQGTEREGGRERPWPGPSPHRR*GPRDTP
Trigger: CGGGGTGTCCCGAGGACCTCATCTCCTGTGCGGACT...TGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR GCA 90 bp GCCCTGGCCGGGCCCACCCACCCACAGGGCAGACATTCCACTTGCACAGAGGGGGGCGCGCGTTGTAACTaGGGCAGTGCTCGATGGCCT +
Preference number: 4 (lower is better)
Translates to: ALAGPTHPQGRHSTCTEGGARCN*GSARWP
Trigger: AGGCCATCGAGCACTGCCGCAGTTACAACGCGCGCC...CCCCTCTGTGCAAGTGGAATGTCTGCCCTGTGGGTGGGTGGGCCCGGCCAGGGC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR GCA 90 bp CAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACCCACAGGGTCCGGAGACCCCCGATaGCATATGCCTTTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: QRGREGGRGPGRAHPPTGSGDPR*HMPFLW
Trigger: CCAAAGGAAAGGCATATGGCATCGGGGGTCTCCGGA...CCCTGTGGGTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR GCA 90 bp GCACAAGAGGGGAAGGCGCCCACCTTGGGTGGGGCGCGGGACGGCTGCAGCTCCGTAGGTCCGCACGGCTaGCGTCATGTTCACCGTGAA +
Preference number: 4 (lower is better)
Translates to: AQEGKAPTLGGARDGCSSVGPHG*RHVHRE
Trigger: TTCACGGTGAACATGACGGCAGCCGTGCGGACCTAC...GGAGCTGCAGCCGTCCCGCGCCCCACCCAAGGTGGGCGCCTTCCCCTCTTGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR GCA 90 bp CTCGGAGAGGCAGGTAGGCGAGCACCACCCCAGAGTCGCGGCGAGCCGAGCCGGGTAGGTCCGCACGGCTaGCGTCATGTTCACCGTGAA +
Preference number: 4 (lower is better)
Translates to: LGEAGRRAPPQSRGEPSRVGPHG*RHVHRE
Trigger: TTCACGGTGAACATGACGGCAGCCGTGCGGACCTAC...CCGGCTCGGCTCGCCGCGACTCTGGGGTGGTGCTCGCCTACCTGCCTCTCCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR GCA 90 bp CCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACGTAGGTCCGCACGGCTaGCGTCATGTTCACCGTGAA +
Preference number: 4 (lower is better)
Translates to: PRDREGGREGEALAGPTHVGPHG*RHVHRE
Trigger: TTCACGGTGAACATGACGGCAGCCGTGCGGACCTAC...GTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR GCA 90 bp TGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCCCCCTGGTGTCCATTTaGCAAGGGACAGAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: CQGTEREGGRERPWPGPPPLVSI*QGTERE
Trigger: CTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGG...GGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCA
68% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR GCA 90 bp CCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGCCGGCAGAGGCGGGTaGCCGGTGGACACTCTCAGC +
Preference number: 4 (lower is better)
Translates to: PWCPFAKGQRGREGGRGPAGRGG*PVDTLS
Trigger: GCTGAGAGTGTCCACCGGGCACCCGCCTCTGCCGGC...AGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR GCA 90 bp AGTCTGTGCTTCTCATTCCAGCAGGCGCTGGGCGGGGGCCCACCCGGCCCCACCCCGTGGCGGAGTCTGTaGTTCTCATTCCAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: SLCFSFQQALGGGPPGPTPWRSL*FSFQQA
Trigger: CGCCTGCTGGAATGAGAAGCACAGACTCCGCCACGG...GGTGGGGCCGGGTGGGCCCCCGCCCAGCGCCTGCTGGAATGAGAAGCACAGACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CCA 90 bp AGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACCCATGGTTGTTTTTCCGGTaGAAGGGCAGGGCGTGGCGT +
Preference number: 4 (lower is better)
Translates to: RDREGGREGEALAGPTHPWLFFR*KGRAWR
Trigger: ACGCCACGCCCTGCCCTTCCACCGGAAAAACAACCA...TGGGTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000456296.5
ENST00000614244.4
CDS-3UTR CCA 90 bp TGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCTGGTTGTTTTTCCGGTaGAAGGGCAGGGCGTGGCGT +
Preference number: 4 (lower is better)
Translates to: CQGTEREGGRERPWPGPPWLFFR*KGRAWR
Trigger: ACGCCACGCCCTGCCCTTCCACCGGAAAAACAACCA...GGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000456296.5
ENST00000614244.4
CDS-3UTR CCA 90 bp CTCGGAGAGGCAGGTAGGCGAGCACCACCCCAGAGTCGCGGCGAGCCGAGCCGGTGGTTGTTTTTCCGGTaGAAGGGCAGGGCGTGGCGT +
Preference number: 4 (lower is better)
Translates to: LGEAGRRAPPQSRGEPSRWLFFR*KGRAWR
Trigger: ACGCCACGCCCTGCCCTTCCACCGGAAAAACAACCA...CCGGCTCGGCTCGCCGCGACTCTGGGGTGGTGCTCGCCTACCTGCCTCTCCGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000456296.5
ENST00000614244.4
CDS-3UTR CCA 90 bp GCCCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCCGGGGGCTCCGCCATaGGGGGACTCAGGCAGTACA +
Preference number: 4 (lower is better)
Translates to: APGVHLPRDREGGREGEAPGAPP*GDSGST
Trigger: TGTACTGCCTGAGTCCCCCCATGGCGGAGCCCCCGG...GGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR CCA 90 bp CTCGGAGAGGCAGGTAGGCGAGCACCACCCCAGAGTCGCGGCGAGCCGAGCCGGGCGGGATGTTCAGGGTaGGGGAGAATTGAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: LGEAGRRAPPQSRGEPSRAGCSG*GRIEEL
Trigger: GAGCTCCTCAATTCTCCCCCACCCTGAACATCCCGC...CCGGCTCGGCTCGCCGCGACTCTGGGGTGGTGCTCGCCTACCTGCCTCTCCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR CCA 90 bp CGGAGTCTGTGCTTCTCATTCCAGCAGGCGCTGGGCGGGGGCCCACCCGGCCCCGAGGGGAGAAGCCCCTaGTGTCCATTTGCCAAGGGA +
Preference number: 4 (lower is better)
Translates to: RSLCFSFQQALGGGPPGPEGRSP*CPFAKG
Trigger: TCCCTTGGCAAATGGACACCAGGGGCTTCTCCCCTC...GGGGCCGGGTGGGCCCCCGCCCAGCGCCTGCTGGAATGAGAAGCACAGACTCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CCA 90 bp CTCGGAGAGGCAGGTAGGCGAGCACCACCCCAGAGTCGCGGCGAGCCGAGCCGGGAGGGGAGAAGCCCCTaGTGTCCATTTGCCAAGGGA +
Preference number: 4 (lower is better)
Translates to: LGEAGRRAPPQSRGEPSREGRSP*CPFAKG
Trigger: TCCCTTGGCAAATGGACACCAGGGGCTTCTCCCCTC...CCGGCTCGGCTCGCCGCGACTCTGGGGTGGTGCTCGCCTACCTGCCTCTCCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR CCA 90 bp GGACACTCTCAGCAGCGCCCCTCCACCCAGCCAGGCCTTGGAGGACTCTTTGTAGGAAGGCGCCCACCTTaGGTGGGGCGCGGGACGGCT +
Preference number: 4 (lower is better)
Translates to: GHSQQRPSTQPGLGGLFVGRRPP*VGRGTA
Trigger: AGCCGTCCCGCGCCCCACCCAAGGTGGGCGCCTTCC...TACAAAGAGTCCTCCAAGGCCTGGCTGGGTGGAGGGGCGCTGCTGAGAGTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CCA 90 bp GGACACTCTCAGCAGCGCCCCTCCACCCAGCCAGGCCTTGGAGGACTCTTTGTAACCAGGAGGGGCGGGTaGACACCACGCCCACCGCCC +
Preference number: 4 (lower is better)
Translates to: GHSQQRPSTQPGLGGLFVTRRGG*TPRPPP
Trigger: GGGCGGTGGGCGTGGTGTCCACCCGCCCCTCCTGGT...TACAAAGAGTCCTCCAAGGCCTGGCTGGGTGGAGGGGCGCTGCTGAGAGTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CCA 90 bp AAGCCCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGACCAGGAGGGGCGGGTaGACACCACGCCCACCGCCC +
Preference number: 4 (lower is better)
Translates to: KPLVSICQGTEREGGRERTRRGG*TPRPPP
Trigger: GGGCGGTGGGCGTGGTGTCCACCCGCCCCTCCTGGT...CCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR TCA 90 bp AGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACCCAGGTCCTCCAGGATGTTaGGTCTCCGTTTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: RDREGGREGEALAGPTHPGPPGC*VSVSSS
Trigger: GGAGGAAGAAACGGAGACTCAACATCCTGGAGGACC...TGGGTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR TCA 90 bp GCCCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCAGTAGCCGTTGGGGATaGCAGTGCCGTCGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: APGVHLPRDREGGREGEASSRWG*QCRRAP
Trigger: AGGCGCCCGACGGCACTGTCATCCCCAACGGCTACT...GGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR TCA 90 bp ATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCAAGGGTGGGGGAGAATTaGGGAGCTCGGAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: ICQGTEREGGRERPWPGPRVGEN*GARRGR
Trigger: CCTGCCTCTCCGAGCTCCTCAATTCTCCCCCACCCT...TGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR TCA 90 bp AGTCTGTGCTTCTCATTCCAGCAGGCGCTGGGCGGGGGCCCACCCGGCCCCACCATAGAGGAGACTCGGTaGCAAGTGAGGGGGCACTCC +
Preference number: 4 (lower is better)
Translates to: SLCFSFQQALGGGPPGPTIEETR*QVRGHS
Trigger: GGAGTGCCCCCTCACTTGTCACCGAGTCTCCTCTAT...GGTGGGGCCGGGTGGGCCCCCGCCCAGCGCCTGCTGGAATGAGAAGCACAGACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR GCA 90 bp ACCCACCCACAGGGCAGACATTCCACTTGCACAGAGGGGAGGGGGTGGCCCAGCTGGGCCACGCCGGTCTaGGAGTCGAGGAAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: THPQGRHSTCTEGRGWPSWATPV*ESRKGS
Trigger: ACTGCCCTTCCTCGACTCGCAGACCGGCGTGGCCCA...GCTGGGCCACCCCCTCCCCTCTGTGCAAGTGGAATGTCTGCCCTGTGGGTGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR GCA 90 bp ACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACCCACAGGTCCACCTCGAGGTCATaGGGAAACTCCAGCAACTGC +
Preference number: 4 (lower is better)
Translates to: TEREGGRERPWPGPPTHRSTSRS*GNSSNC
Trigger: GCAGTTGCTGGAGTTTCCGCATGACCTCGAGGTGGA...CCTGTGGGTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR GCA 90 bp CAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACCCACAGGGACCCCCGATGCCATATaGCTTTCCTTTGGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: QRGREGGRGPGRAHPPTGTPDAI*LSFGPV
Trigger: AACAGGGCCAAAGGAAAGGCATATGGCATCGGGGGT...CCCTGTGGGTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR GCA 90 bp CCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACTCCGGAGACCCCCGATaGCATATGCCTTTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: PRDREGGREGEALAGPTHSGDPR*HMPFLW
Trigger: CCAAAGGAAAGGCATATGGCATCGGGGGTCTCCGGA...GTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR GCA 90 bp CGGGTGCCCGGTGGACACTCTCAGCAGCGCCCCTCCACCCAGCCAGGCCTTGGACCCCTGGTGTCCATTTaGCAAGGGACAGAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: RVPGGHSQQRPSTQPGLGPLVSI*QGTERE
Trigger: CTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGG...TCCAAGGCCTGGCTGGGTGGAGGGGCGCTGCTGAGAGTGTCCACCGGGCACCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR GCA 90 bp GCCCTGGCCGGGCCCACCCACCCACAGGGCAGACATTCCACTTGCACAGAGGGGAAAAGGCTCTGTCCATaGCCCTGGCTGGCACCCACC +
Preference number: 4 (lower is better)
Translates to: ALAGPTHPQGRHSTCTEGKRLCP*PWLAPT
Trigger: GGTGGGTGCCAGCCAGGGGCATGGACAGAGCCTTTT...CCCCTCTGTGCAAGTGGAATGTCTGCCCTGTGGGTGGGTGGGCCCGGCCAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CCA 90 bp GGGGAAGGCGCCCACCTTGGGTGGGGCGCGGGACGGCTGCAGCTCCAGAAATTGTGCGGCAGTGCTCGATaGCCTCGCGGTAGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: GEGAHLGWGAGRLQLQKLCGSAR*PRGRSP
Trigger: AGGACTTCTACCGCGAGGCCATCGAGCACTGCCGCA...CAATTTCTGGAGCTGCAGCCGTCCCGCGCCCCACCCAAGGTGGGCGCCTTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CCA 90 bp CCCCCGTCTCTGCACACAGTAGAGCCTCGAGGACCGGCCCTTCCGGGAGGCCACTGCGGCAGTGCTCGATaGCCTCGCGGTAGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: PPSLHTVEPRGPALPGGHCGSAR*PRGRSP
Trigger: AGGACTTCTACCGCGAGGCCATCGAGCACTGCCGCA...GTGGCCTCCCGGAAGGGCCGGTCCTCGAGGCTCTACTGTGTGCAGAGACGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418517.5
CDS-3UTR CCA 90 bp AGTCTGTGCTTCTCATTCCAGCAGGCGCTGGGCGGGGGCCCACCCGGCCCCACCTGGTTGTTTTTCCGGTaGAAGGGCAGGGCGTGGCGT +
Preference number: 4 (lower is better)
Translates to: SLCFSFQQALGGGPPGPTWLFFR*KGRAWR
Trigger: ACGCCACGCCCTGCCCTTCCACCGGAAAAACAACCA...GGTGGGGCCGGGTGGGCCCCCGCCCAGCGCCTGCTGGAATGAGAAGCACAGACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000614244.4
CDS-3UTR CCA 90 bp CGGGTGGACACCACGCCCACCGCCCTGGGCACAAGAGGGGAAGGCGCCCACCTTTGGTTGTTTTTCCGGTaGAAGGGCAGGGCGTGGCGT +
Preference number: 4 (lower is better)
Translates to: RVDTTPTALGTRGEGAHLWLFFR*KGRAWR
Trigger: ACGCCACGCCCTGCCCTTCCACCGGAAAAACAACCA...AAGGTGGGCGCCTTCCCCTCTTGTGCCCAGGGCGGTGGGCGTGGTGTCCACCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000614244.4
CDS-3UTR CCA 90 bp GCACAAGAGGGGAAGGCGCCCACCTTGGGTGGGGCGCGGGACGGCTGCAGCTCCCGTCGGGCGCCTTCTTaGCTGTGTGTTTCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: AQEGKAPTLGGARDGCSSRRAPS*LCVSFV
Trigger: CACAAAGGAAACACACAGCCAAGAAGGCGCCCGACG...GGAGCTGCAGCCGTCCCGCGCCCCACCCAAGGTGGGCGCCTTCCCCTCTTGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CCA 90 bp CTCGGAGAGGCAGGTAGGCGAGCACCACCCCAGAGTCGCGGCGAGCCGAGCCGGCGTCGGGCGCCTTCTTaGCTGTGTGTTTCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: LGEAGRRAPPQSRGEPSRRRAPS*LCVSFV
Trigger: CACAAAGGAAACACACAGCCAAGAAGGCGCCCGACG...CCGGCTCGGCTCGCCGCGACTCTGGGGTGGTGCTCGCCTACCTGCCTCTCCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR CCA 90 bp CCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTCCGGGGGCTCCGCCATaGGGGGACTCAGGCAGTACA +
Preference number: 4 (lower is better)
Translates to: PWCPFAKGQRGREGGRGPPGAPP*GDSGST
Trigger: TGTACTGCCTGAGTCCCCCCATGGCGGAGCCCCCGG...AGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR CCA 90 bp CGGGTGCCCGGTGGACACTCTCAGCAGCGCCCCTCCACCCAGCCAGGCCTTGGAGCGGGATGTTCAGGGTaGGGGAGAATTGAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: RVPGGHSQQRPSTQPGLGAGCSG*GRIEEL
Trigger: GAGCTCCTCAATTCTCCCCCACCCTGAACATCCCGC...TCCAAGGCCTGGCTGGGTGGAGGGGCGCTGCTGAGAGTGTCCACCGGGCACCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CCA 90 bp GGACACTCTCAGCAGCGCCCCTCCACCCAGCCAGGCCTTGGAGGACTCTTTGTAGAGGCGGGTGCCCGGTaGACACTCTCAGCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: GHSQQRPSTQPGLGGLFVEAGAR*TLSAAP
Trigger: GGGCGCTGCTGAGAGTGTCCACCGGGCACCCGCCTC...TACAAAGAGTCCTCCAAGGCCTGGCTGGGTGGAGGGGCGCTGCTGAGAGTGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CCA 90 bp ACCAAGGTTCACATCATGCAGTATCCACCGTGGGCACCAGGAGGGGCGGGTGGAGGAAGGCGCCCACCTTaGGTGGGGCGCGGGACGGCT +
Preference number: 4 (lower is better)
Translates to: TKVHIMQYPPWAPGGAGGGRRPP*VGRGTA
Trigger: AGCCGTCCCGCGCCCCACCCAAGGTGGGCGCCTTCC...TCCACCCGCCCCTCCTGGTGCCCACGGTGGATACTGCATGATGTGAACCTTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CCA 90 bp ATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCAATGCAGTATCCACCGTaGGCACCAGGAGGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: ICQGTEREGGRERPWPGPMQYPP*APGGAG
Trigger: ACCCGCCCCTCCTGGTGCCCACGGTGGATACTGCAT...TGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR TCA 90 bp AGCCCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCAGTCCGCACAGGAGATaGGGTCCTCGGGACACCCCG +
Preference number: 4 (lower is better)
Translates to: SPWCPFAKGQRGREGGRGSPHRR*GPRDTP
Trigger: CGGGGTGTCCCGAGGACCTCATCTCCTGTGCGGACT...GCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR TCA 90 bp ACCCACCCACAGGGCAGACATTCCACTTGCACAGAGGGGAGGGGGTGGCCCAGCAGGGTGGGGGAGAATTaGGGAGCTCGGAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: THPQGRHSTCTEGRGWPSRVGEN*GARRGR
Trigger: CCTGCCTCTCCGAGCTCCTCAATTCTCCCCCACCCT...GCTGGGCCACCCCCTCCCCTCTGTGCAAGTGGAATGTCTGCCCTGTGGGTGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR GCA 90 bp GCCCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCGGCGCGCGTTGTAACTaGGGCAGTGCTCGATGGCCT +
Preference number: 4 (lower is better)
Translates to: APGVHLPRDREGGREGEAGARCN*GSARWP
Trigger: AGGCCATCGAGCACTGCCGCAGTTACAACGCGCGCC...GGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR GCA 90 bp GAGGCGGGTGCCCGGTGGACACTCTCAGCAGCGCCCCTCCACCCAGCCAGGCCTACCCCCGATGCCATATaGCTTTCCTTTGGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: EAGARWTLSAAPLHPARPTPDAI*LSFGPV
Trigger: AACAGGGCCAAAGGAAAGGCATATGGCATCGGGGGT...AGGCCTGGCTGGGTGGAGGGGCGCTGCTGAGAGTGTCCACCGGGCACCCGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR GCA 90 bp AGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACCCAACCCCCGATGCCATATaGCTTTCCTTTGGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: RDREGGREGEALAGPTHPTPDAI*LSFGPV
Trigger: AACAGGGCCAAAGGAAAGGCATATGGCATCGGGGGT...TGGGTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR GCA 90 bp CACAAGAGGGGAAGGCGCCCACCTTGGGTGGGGCGCGGGACGGCTGCAGCTCCATCCGGAGACCCCCGATaGCATATGCCTTTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: HKRGRRPPWVGRGTAAAPSGDPR*HMPFLW
Trigger: CCAAAGGAAAGGCATATGGCATCGGGGGTCTCCGGA...TGGAGCTGCAGCCGTCCCGCGCCCCACCCAAGGTGGGCGCCTTCCCCTCTTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR GCA 90 bp CGGGTGCCCGGTGGACACTCTCAGCAGCGCCCCTCCACCCAGCCAGGCCTTGGATCCGGAGACCCCCGATaGCATATGCCTTTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: RVPGGHSQQRPSTQPGLGSGDPR*HMPFLW
Trigger: CCAAAGGAAAGGCATATGGCATCGGGGGTCTCCGGA...TCCAAGGCCTGGCTGGGTGGAGGGGCGCTGCTGAGAGTGTCCACCGGGCACCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR GCA 90 bp GCACAAGAGGGGAAGGCGCCCACCTTGGGTGGGGCGCGGGACGGCTGCAGCTCCCCAAGGTTCACATCATaGAGTATCCACCGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: AQEGKAPTLGGARDGCSSPRFTS*SIHRGH
Trigger: GTGCCCACGGTGGATACTGCATGATGTGAACCTTGG...GGAGCTGCAGCCGTCCCGCGCCCCACCCAAGGTGGGCGCCTTCCCCTCTTGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CCA 90 bp GAGTCTGTGCTTCTCATTCCAGCAGGCGCTGGGCGGGGGCCCACCCGGCCCCACCGTCGGGCGCCTTCTTaGCTGTGTGTTTCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: ESVLLIPAGAGRGPTRPHRRAPS*LCVSFV
Trigger: CACAAAGGAAACACACAGCCAAGAAGGCGCCCGACG...GTGGGGCCGGGTGGGCCCCCGCCCAGCGCCTGCTGGAATGAGAAGCACAGACTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CCA 90 bp CACAAGAGGGGAAGGCGCCCACCTTGGGTGGGGCGCGGGACGGCTGCAGCTCCACGTCGGGCGCCTTCTTaGCTGTGTGTTTCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: HKRGRRPPWVGRGTAAAPRRAPS*LCVSFV
Trigger: CACAAAGGAAACACACAGCCAAGAAGGCGCCCGACG...TGGAGCTGCAGCCGTCCCGCGCCCCACCCAAGGTGGGCGCCTTCCCCTCTTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CCA 90 bp AAGCCCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCGGGGGCTCCGCCATaGGGGGACTCAGGCAGTACA +
Preference number: 4 (lower is better)
Translates to: KPLVSICQGTEREGGRERPGAPP*GDSGST
Trigger: TGTACTGCCTGAGTCCCCCCATGGCGGAGCCCCCGG...CCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGGCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR CCA 90 bp GTGGACACTCTCAGCAGCGCCCCTCCACCCAGCCAGGCCTTGGAGGACTCTTTGTGCAGCTCCAGAAATTaGGGTTGGGGCGCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: VDTLSSAPPPSQALEDSLCSSRN*GWGARR
Trigger: CCGCCGGGCGCCCCAACCCCAATTTCTGGAGCTGCA...CAAAGAGTCCTCCAAGGCCTGGCTGGGTGGAGGGGCGCTGCTGAGAGTGTCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CCA 90 bp AGGGAGAGAAAAGGAGTCCGTGGCGGAGTCTGTGCTTCTCATTCCAGCAGGCGCGAATGGCGGTGGCCATaGCCCGCTCGGCTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: RERKGVRGGVCASHSSRREWRWP*PARLGR
Trigger: GCGGCCCAGCCGAGCGGGCCATGGCCACCGCCATTC...GCGCCTGCTGGAATGAGAAGCACAGACTCCGCCACGGACTCCTTTTCTCTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412732.5
ENST00000416611.5
CDS-3UTR CCA 90 bp GAAGCGGTGTCCTGGCGTTTCCGGAGACCCCCGATGCCATATGCCTTTCCTTTGGAATGGCGGTGGCCATaGCCCGCTCGGCTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: EAVSWRFRRPPMPYAFPLEWRWP*PARLGR
Trigger: GCGGCCCAGCCGAGCGGGCCATGGCCACCGCCATTC...CAAAGGAAAGGCATATGGCATCGGGGGTCTCCGGAAACGCCAGGACACCGCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418517.5
CDS-3UTR CCA 90 bp CCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGTTCTGAATGGCGGTaGCCATGGCCCGCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: PWCPFAKGQRGREGGRGPGSEWR*PWPARL
Trigger: CAGCCGAGCGGGCCATGGCCACCGCCATTCAGAACC...AGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000418517.5
ENST00000456296.5
CDS-3UTR TCA 90 bp GTGGACACTCTCAGCAGCGCCCCTCCACCCAGCCAGGCCTTGGAGGACTCTTTGAGGGTGGGGGAGAATTaGGGAGCTCGGAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: VDTLSSAPPPSQALEDSLRVGEN*GARRGR
Trigger: CCTGCCTCTCCGAGCTCCTCAATTCTCCCCCACCCT...CAAAGAGTCCTCCAAGGCCTGGCTGGGTGGAGGGGCGCTGCTGAGAGTGTCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR TCA 90 bp AGGGAGAGAAAAGGAGTCCGTGGCGGAGTCTGTGCTTCTCATTCCAGCAGGCGCCGGTCGGGCGGGCGCTaGGGCCGCCCATCCATTCAT +
Preference number: 4 (lower is better)
Translates to: RERKGVRGGVCASHSSRRRSGGR*GRPSIH
Trigger: ATGAATGGATGGGCGGCCTCAGCGCCCGCCCGACCG...GCGCCTGCTGGAATGAGAAGCACAGACTCCGCCACGGACTCCTTTTCTCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420980.7
ENST00000614244.4
CDS-3UTR TCA 90 bp CCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGACTTGAGCGGGTTCTaGATGGCGGTGGCCATGGCC +
Preference number: 4 (lower is better)
Translates to: PWCPFAKGQRGREGGRGPDLSGF*MAVAMA
Trigger: GGCCATGGCCACCGCCATTCAGAACCCGCTCAAGTC...AGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000418517.5
ENST00000456296.5
CDS-3UTR GCA 90 bp CAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACCCACAGGGCTCCTTCTTCAGGGGTaGTTCACAGTCGATCTTGTA +
Preference number: 4 (lower is better)
Translates to: QRGREGGRGPGRAHPPTGLLLQG*FTVDLV
Trigger: TACAAGATCGACTGTGAAGCACCCCTGAAGAAGGAG...CCCTGTGGGTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR GCA 90 bp GGGGAAGGCGCCCACCTTGGGTGGGGCGCGGGACGGCTGCAGCTCCAGAAATTGTCCGGAGACCCCCGATaGCATATGCCTTTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: GEGAHLGWGAGRLQLQKLSGDPR*HMPFLW
Trigger: CCAAAGGAAAGGCATATGGCATCGGGGGTCTCCGGA...CAATTTCTGGAGCTGCAGCCGTCCCGCGCCCCACCCAAGGTGGGCGCCTTCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR GCA 90 bp TCCCCCGTCTCTGCACACAGTAGAGCCTCGAGGACCGGCCCTTCCGGGAGGCCAGTAGGTCCGCACGGCTaGCGTCATGTTCACCGTGAA +
Preference number: 4 (lower is better)
Translates to: SPVSAHSRASRTGPSGRPVGPHG*RHVHRE
Trigger: TTCACGGTGAACATGACGGCAGCCGTGCGGACCTAC...TGGCCTCCCGGAAGGGCCGGTCCTCGAGGCTCTACTGTGTGCAGAGACGGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418517.5
CDS-3UTR GCA 90 bp CGGGTGGACACCACGCCCACCGCCCTGGGCACAAGAGGGGAAGGCGCCCACCTTCCAAGGTTCACATCATaGAGTATCCACCGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: RVDTTPTALGTRGEGAHLPRFTS*SIHRGH
Trigger: GTGCCCACGGTGGATACTGCATGATGTGAACCTTGG...AAGGTGGGCGCCTTCCCCTCTTGTGCCCAGGGCGGTGGGCGTGGTGTCCACCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR GCA 90 bp CGGGTGCCCGGTGGACACTCTCAGCAGCGCCCCTCCACCCAGCCAGGCCTTGGACCAAGGTTCACATCATaGAGTATCCACCGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: RVPGGHSQQRPSTQPGLGPRFTS*SIHRGH
Trigger: GTGCCCACGGTGGATACTGCATGATGTGAACCTTGG...TCCAAGGCCTGGCTGGGTGGAGGGGCGCTGCTGAGAGTGTCCACCGGGCACCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CCA 90 bp ATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCATGGTTGTTTTTCCGGTaGAAGGGCAGGGCGTGGCGT +
Preference number: 4 (lower is better)
Translates to: ICQGTEREGGRERPWPGPWLFFR*KGRAWR
Trigger: ACGCCACGCCCTGCCCTTCCACCGGAAAAACAACCA...TGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000456296.5
ENST00000614244.4
CDS-3UTR CCA 90 bp ATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCAGCGGGATGTTCAGGGTaGGGGAGAATTGAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: ICQGTEREGGRERPWPGPAGCSG*GRIEEL
Trigger: GAGCTCCTCAATTCTCCCCCACCCTGAACATCCCGC...TGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR CCA 90 bp ATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCAGAGGGGAGAAGCCCCTaGTGTCCATTTGCCAAGGGA +
Preference number: 4 (lower is better)
Translates to: ICQGTEREGGRERPWPGPEGRSP*CPFAKG
Trigger: TCCCTTGGCAAATGGACACCAGGGGCTTCTCCCCTC...TGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR CCA 90 bp AGGGAGAGAAAAGGAGTCCGTGGCGGAGTCTGTGCTTCTCATTCCAGCAGGCGCCCACGCCCACCGCCCTaGGCACAAGAGGGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: RERKGVRGGVCASHSSRRPRPPP*AQEGKA
Trigger: CGCCTTCCCCTCTTGTGCCCAGGGCGGTGGGCGTGG...GCGCCTGCTGGAATGAGAAGCACAGACTCCGCCACGGACTCCTTTTCTCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CCA 90 bp AGCCCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCATGCAGTATCCACCGTaGGCACCAGGAGGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: SPWCPFAKGQRGREGGRGMQYPP*APGGAG
Trigger: ACCCGCCCCTCCTGGTGCCCACGGTGGATACTGCAT...GCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CCA 90 bp AGTCTGTGCTTCTCATTCCAGCAGGCGCTGGGCGGGGGCCCACCCGGCCCCACCGAGAAAAGGAGTCCGTaGCGGAGTCTGTGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: SLCFSFQQALGGGPPGPTEKRSP*RSLCFS
Trigger: TGAGAAGCACAGACTCCGCCACGGACTCCTTTTCTC...GGTGGGGCCGGGTGGGCCCCCGCCCAGCGCCTGCTGGAATGAGAAGCACAGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR TCA 90 bp AGAAAAGGAGTCCGTGGCGGAGTCTGTGCTTCTCATTCCAGCAGGCGCTGGGCGAGTAGCCGTTGGGGATaGCAGTGCCGTCGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: RKGVRGGVCASHSSRRWASSRWG*QCRRAP
Trigger: AGGCGCCCGACGGCACTGTCATCCCCAACGGCTACT...CGCCCAGCGCCTGCTGGAATGAGAAGCACAGACTCCGCCACGGACTCCTTTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR TCA 90 bp CAGGGAAGCGGTGTCCTGGCGTTTCCGGAGACCCCCGATGCCATATGCCTTTCCAGGGTGGGGGAGAATTaGGGAGCTCGGAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: QGSGVLAFPETPDAICLSRVGEN*GARRGR
Trigger: CCTGCCTCTCCGAGCTCCTCAATTCTCCCCCACCCT...GGAAAGGCATATGGCATCGGGGGTCTCCGGAAACGCCAGGACACCGCTTCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000418517.5
CDS-3UTR TCA 90 bp CGGTGGACACTCTCAGCAGCGCCCCTCCACCCAGCCAGGCCTTGGAGGACTCTTATAGAGGAGACTCGGTaGCAAGTGAGGGGGCACTCC +
Preference number: 4 (lower is better)
Translates to: RWTLSAAPLHPARPWRTLIEETR*QVRGHS
Trigger: GGAGTGCCCCCTCACTTGTCACCGAGTCTCCTCTAT...AAGAGTCCTCCAAGGCCTGGCTGGGTGGAGGGGCGCTGCTGAGAGTGTCCACCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR GCA 90 bp GAGGCGGGTGCCCGGTGGACACTCTCAGCAGCGCCCCTCCACCCAGCCAGGCCTCTCCTTCTTCAGGGGTaGTTCACAGTCGATCTTGTA +
Preference number: 4 (lower is better)
Translates to: EAGARWTLSAAPLHPARPLLLQG*FTVDLV
Trigger: TACAAGATCGACTGTGAAGCACCCCTGAAGAAGGAG...AGGCCTGGCTGGGTGGAGGGGCGCTGCTGAGAGTGTCCACCGGGCACCCGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR GCA 90 bp AGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACCCACTCCTTCTTCAGGGGTaGTTCACAGTCGATCTTGTA +
Preference number: 4 (lower is better)
Translates to: RDREGGREGEALAGPTHPLLLQG*FTVDLV
Trigger: TACAAGATCGACTGTGAAGCACCCCTGAAGAAGGAG...TGGGTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR GCA 90 bp TGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCCTCCTTCTTCAGGGGTaGTTCACAGTCGATCTTGTA +
Preference number: 4 (lower is better)
Translates to: CQGTEREGGRERPWPGPPLLLQG*FTVDLV
Trigger: TACAAGATCGACTGTGAAGCACCCCTGAAGAAGGAG...GGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR GCA 90 bp ATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCATCCGGAGACCCCCGATaGCATATGCCTTTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: ICQGTEREGGRERPWPGPSGDPR*HMPFLW
Trigger: CCAAAGGAAAGGCATATGGCATCGGGGGTCTCCGGA...TGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR GCA 90 bp GCCCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCCCCTGGTGTCCATTTaGCAAGGGACAGAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: APGVHLPRDREGGREGEAPLVSI*QGTERE
Trigger: CTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGG...GGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGGC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR GCA 90 bp CCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTAAAAGGCTCTGTCCATaGCCCTGGCTGGCACCCACC +
Preference number: 4 (lower is better)
Translates to: PWCPFAKGQRGREGGRGPKRLCP*PWLAPT
Trigger: GGTGGGTGCCAGCCAGGGGCATGGACAGAGCCTTTT...AGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR GCA 90 bp TCTCAGCAGCGCCCCTCCACCCAGCCAGGCCTTGGAGGACTCTTTGTATATATTCTGCGCCGCCCGCTCTaGCGCCCAGCGCGCTACGAT +
Preference number: 4 (lower is better)
Translates to: SQQRPSTQPGLGGLFVYILRRPL*RPARYD
Trigger: ATCGTAGCGCGCTGGGCGGCAGAGCGGGCGGCGCAG...AATATATACAAAGAGTCCTCCAAGGCCTGGCTGGGTGGAGGGGCGCTGCTGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416611.5
CDS-3UTR CCA 90 bp AGCCCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCTGCGGCAGTGCTCGATaGCCTCGCGGTAGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: SPWCPFAKGQRGREGGRGCGSAR*PRGRSP
Trigger: AGGACTTCTACCGCGAGGCCATCGAGCACTGCCGCA...GCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR CCA 90 bp ACCAAGGTTCACATCATGCAGTATCCACCGTGGGCACCAGGAGGGGCGGGTGGATGGAAGGGCAGGGCGTaGCGTTCGGCGTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TKVHIMQYPPWAPGGAGGWKGRA*RSAFSS
Trigger: GGAGGAGAACGCCGAACGCCACGCCCTGCCCTTCCA...TCCACCCGCCCCTCCTGGTGCCCACGGTGGATACTGCATGATGTGAACCTTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000614244.4
CDS-3UTR CCA 90 bp ATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACGTCGGGCGCCTTCTTaGCTGTGTGTTTCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: ICQGTEREGGRERPWPGPRRAPS*LCVSFV
Trigger: CACAAAGGAAACACACAGCCAAGAAGGCGCCCGACG...TGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR CCA 90 bp ACCCACCCACAGGGCAGACATTCCACTTGCACAGAGGGGAGGGGGTGGCCCAGCGCGGGATGTTCAGGGTaGGGGAGAATTGAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: THPQGRHSTCTEGRGWPSAGCSG*GRIEEL
Trigger: GAGCTCCTCAATTCTCCCCCACCCTGAACATCCCGC...GCTGGGCCACCCCCTCCCCTCTGTGCAAGTGGAATGTCTGCCCTGTGGGTGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR CCA 90 bp AGAAAAGGAGTCCGTGGCGGAGTCTGTGCTTCTCATTCCAGCAGGCGCTGGGCGGGTTCTGAATGGCGGTaGCCATGGCCCGCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: RKGVRGGVCASHSSRRWAGSEWR*PWPARL
Trigger: CAGCCGAGCGGGCCATGGCCACCGCCATTCAGAACC...CGCCCAGCGCCTGCTGGAATGAGAAGCACAGACTCCGCCACGGACTCCTTTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412732.5
ENST00000416611.5
CDS-3UTR TCA 90 bp AGAAAAGGAGTCCGTGGCGGAGTCTGTGCTTCTCATTCCAGCAGGCGCTGGGCGAGGGTGGGGGAGAATTaGGGAGCTCGGAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: RKGVRGGVCASHSSRRWARVGEN*GARRGR
Trigger: CCTGCCTCTCCGAGCTCCTCAATTCTCCCCCACCCT...CGCCCAGCGCCTGCTGGAATGAGAAGCACAGACTCCGCCACGGACTCCTTTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR TCA 90 bp AGCCCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCATAGAGGAGACTCGGTaGCAAGTGAGGGGGCACTCC +
Preference number: 4 (lower is better)
Translates to: SPWCPFAKGQRGREGGRGIEETR*QVRGHS
Trigger: GGAGTGCCCCCTCACTTGTCACCGAGTCTCCTCTAT...GCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR GCA 90 bp GCCCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCTCCACCTCGAGGTCATaGGGAAACTCCAGCAACTGC +
Preference number: 4 (lower is better)
Translates to: APGVHLPRDREGGREGEASTSRS*GNSSNC
Trigger: GCAGTTGCTGGAGTTTCCGCATGACCTCGAGGTGGA...GGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR GCA 90 bp CGGTGGACACTCTCAGCAGCGCCCCTCCACCCAGCCAGGCCTTGGAGGACTCTTTCCACCTCGAGGTCATaGGGAAACTCCAGCAACTGC +
Preference number: 4 (lower is better)
Translates to: RWTLSAAPLHPARPWRTLSTSRS*GNSSNC
Trigger: GCAGTTGCTGGAGTTTCCGCATGACCTCGAGGTGGA...AAGAGTCCTCCAAGGCCTGGCTGGGTGGAGGGGCGCTGCTGAGAGTGTCCACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR GCA 90 bp ATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCAACCCCCGATGCCATATaGCTTTCCTTTGGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: ICQGTEREGGRERPWPGPTPDAI*LSFGPV
Trigger: AACAGGGCCAAAGGAAAGGCATATGGCATCGGGGGT...TGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR GCA 90 bp ACCCACCCACAGGGCAGACATTCCACTTGCACAGAGGGGAGGGGGTGGCCCAGCTCCGGAGACCCCCGATaGCATATGCCTTTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: THPQGRHSTCTEGRGWPSSGDPR*HMPFLW
Trigger: CCAAAGGAAAGGCATATGGCATCGGGGGTCTCCGGA...GCTGGGCCACCCCCTCCCCTCTGTGCAAGTGGAATGTCTGCCCTGTGGGTGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR GCA 90 bp ATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCATGTGTGTTTCCTTTGTaGCTCAGGGACCCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: ICQGTEREGGRERPWPGPCVFPL*LRDPGQ
Trigger: TTGGCCTGGGTCCCTGAGGCACAAAGGAAACACACA...TGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR GCA 90 bp CCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGTAGGTCCGCACGGCTaGCGTCATGTTCACCGTGAA +
Preference number: 4 (lower is better)
Translates to: PWCPFAKGQRGREGGRGPVGPHG*RHVHRE
Trigger: TTCACGGTGAACATGACGGCAGCCGTGCGGACCTAC...AGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR GCA 90 bp GTGGACACTCTCAGCAGCGCCCCTCCACCCAGCCAGGCCTTGGAGGACTCTTTGGTAGGTCCGCACGGCTaGCGTCATGTTCACCGTGAA +
Preference number: 4 (lower is better)
Translates to: VDTLSSAPPPSQALEDSLVGPHG*RHVHRE
Trigger: TTCACGGTGAACATGACGGCAGCCGTGCGGACCTAC...CAAAGAGTCCTCCAAGGCCTGGCTGGGTGGAGGGGCGCTGCTGAGAGTGTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR GCA 90 bp GTGGACACTCTCAGCAGCGCCCCTCCACCCAGCCAGGCCTTGGAGGACTCTTTGCCCCTGGTGTCCATTTaGCAAGGGACAGAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: VDTLSSAPPPSQALEDSLPLVSI*QGTERE
Trigger: CTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGG...CAAAGAGTCCTCCAAGGCCTGGCTGGGTGGAGGGGCGCTGCTGAGAGTGTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR GCA 90 bp CCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTCCCCTGGTGTCCATTTaGCAAGGGACAGAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: PWCPFAKGQRGREGGRGPPLVSI*QGTERE
Trigger: CTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGG...AGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR GCA 90 bp AGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACCCAACATACACCCCCTCATaGATCCAAAGACACAAGCAT +
Preference number: 4 (lower is better)
Translates to: RDREGGREGEALAGPTHPTYTPS*IQRHKH
Trigger: ATGCTTGTGTCTTTGGATGCATGAGGGGGTGTATGT...TGGGTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414789.5
CDS-3UTR CCA 90 bp CGCCCACCTTGGGTGGGGCGCGGGACGGCTGCAGCTCCAGAAATTGGGGTTGGGCCCTGTTCTTCCTCCTaGGAATGTCATCCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: RPPWVGRGTAAAPEIGVGPCSSS*ECHPPS
Trigger: ACTTGGAGGATGACATTCCCAGGAGGAAGAACAGGG...CCCAACCCCAATTTCTGGAGCTGCAGCCGTCCCGCGCCCCACCCAAGGTGGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CCA 90 bp GCCCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCGTCGGGCGCCTTCTTaGCTGTGTGTTTCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: APGVHLPRDREGGREGEARRAPS*LCVSFV
Trigger: CACAAAGGAAACACACAGCCAAGAAGGCGCCCGACG...GGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR CCA 90 bp GTGGACACTCTCAGCAGCGCCCCTCCACCCAGCCAGGCCTTGGAGGACTCTTTGGCGGGATGTTCAGGGTaGGGGAGAATTGAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: VDTLSSAPPPSQALEDSLAGCSG*GRIEEL
Trigger: GAGCTCCTCAATTCTCCCCCACCCTGAACATCCCGC...CAAAGAGTCCTCCAAGGCCTGGCTGGGTGGAGGGGCGCTGCTGAGAGTGTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR TCA 90 bp ATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCAGGACGTATCCCTACCTaGACACATGCAGACACACAA +
Preference number: 4 (lower is better)
Translates to: ICQGTEREGGRERPWPGPGRIPT*THADTQ
Trigger: TTGTGTGTCTGCATGTGTTCAGGTAGGGATACGTCC...TGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414789.5
CDS-3UTR TCA 90 bp GCCCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCAGGCCCCCAGCTCATaGGTAGAAACACGATACAGA +
Preference number: 4 (lower is better)
Translates to: APGVHLPRDREGGREGEAQAPSS*VETRYR
Trigger: TCTGTATCGTGTTTCTACTCATGAGCTGGGGGCCTG...GGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414789.5
CDS-3UTR GCA 90 bp AGCCCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCTCCACCTCGAGGTCATaGGGAAACTCCAGCAACTGC +
Preference number: 4 (lower is better)
Translates to: SPWCPFAKGQRGREGGRGSTSRS*GNSSNC
Trigger: GCAGTTGCTGGAGTTTCCGCATGACCTCGAGGTGGA...GCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR GCA 90 bp GCCCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCACCCCCGATGCCATATaGCTTTCCTTTGGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: APGVHLPRDREGGREGEATPDAI*LSFGPV
Trigger: AACAGGGCCAAAGGAAAGGCATATGGCATCGGGGGT...GGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR GCA 90 bp CGGTGGACACTCTCAGCAGCGCCCCTCCACCCAGCCAGGCCTTGGAGGACTCTTTGTGTGTTTCCTTTGTaGCTCAGGGACCCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: RWTLSAAPLHPARPWRTLCVFPL*LRDPGQ
Trigger: TTGGCCTGGGTCCCTGAGGCACAAAGGAAACACACA...AAGAGTCCTCCAAGGCCTGGCTGGGTGGAGGGGCGCTGCTGAGAGTGTCCACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR GCA 90 bp AGAAAAGGAGTCCGTGGCGGAGTCTGTGCTTCTCATTCCAGCAGGCGCTGGGCGAAAAGGCTCTGTCCATaGCCCTGGCTGGCACCCACC +
Preference number: 4 (lower is better)
Translates to: RKGVRGGVCASHSSRRWAKRLCP*PWLAPT
Trigger: GGTGGGTGCCAGCCAGGGGCATGGACAGAGCCTTTT...CGCCCAGCGCCTGCTGGAATGAGAAGCACAGACTCCGCCACGGACTCCTTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR GCA 90 bp GAGGAGGGAGAGAAAAGGAGTCCGTGGCGGAGTCTGTGCTTCTCATTCCAGCAGGGGGCGCGGGACGGCTaGAGCTCCAGAAATTGGGGT +
Preference number: 4 (lower is better)
Translates to: EEGEKRSPWRSLCFSFQQGARDG*SSRNWG
Trigger: ACCCCAATTTCTGGAGCTGCAGCCGTCCCGCGCCCC...CTGCTGGAATGAGAAGCACAGACTCCGCCACGGACTCCTTTTCTCTCCCTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CCA 90 bp CCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTCGTCGGGCGCCTTCTTaGCTGTGTGTTTCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: PWCPFAKGQRGREGGRGPRRAPS*LCVSFV
Trigger: CACAAAGGAAACACACAGCCAAGAAGGCGCCCGACG...AGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR CCA 90 bp TCTCAGCAGCGCCCCTCCACCCAGCCAGGCCTTGGAGGACTCTTTGTATATATTCCGGGGGCTCCGCCATaGGGGGACTCAGGCAGTACA +
Preference number: 4 (lower is better)
Translates to: SQQRPSTQPGLGGLFVYIPGAPP*GDSGST
Trigger: TGTACTGCCTGAGTCCCCCCATGGCGGAGCCCCCGG...AATATATACAAAGAGTCCTCCAAGGCCTGGCTGGGTGGAGGGGCGCTGCTGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CCA 90 bp GCCCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCGAGAAAAGGAGTCCGTaGCGGAGTCTGTGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: APGVHLPRDREGGREGEAEKRSP*RSLCFS
Trigger: TGAGAAGCACAGACTCCGCCACGGACTCCTTTTCTC...GGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR TCA 90 bp AAGCCCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGGGTCCTCCAGGATGTTaGGTCTCCGTTTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: KPLVSICQGTEREGGRERGPPGC*VSVSSS
Trigger: GGAGGAAGAAACGGAGACTCAACATCCTGGAGGACC...CCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR GCA 90 bp ATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACTCCTTCTTCAGGGGTaGTTCACAGTCGATCTTGTA +
Preference number: 4 (lower is better)
Translates to: ICQGTEREGGRERPWPGPLLLQG*FTVDLV
Trigger: TACAAGATCGACTGTGAAGCACCCCTGAAGAAGGAG...TGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR GCA 90 bp AAGCCCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGTCCACCTCGAGGTCATaGGGAAACTCCAGCAACTGC +
Preference number: 4 (lower is better)
Translates to: KPLVSICQGTEREGGRERSTSRS*GNSSNC
Trigger: GCAGTTGCTGGAGTTTCCGCATGACCTCGAGGTGGA...CCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR GCA 90 bp AGCCCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCACCCCCGATGCCATATaGCTTTCCTTTGGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: SPWCPFAKGQRGREGGRGTPDAI*LSFGPV
Trigger: AACAGGGCCAAAGGAAAGGCATATGGCATCGGGGGT...GCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR GCA 90 bp AGCCCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCTGTGTGTTTCCTTTGTaGCTCAGGGACCCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: SPWCPFAKGQRGREGGRGCVFPL*LRDPGQ
Trigger: TTGGCCTGGGTCCCTGAGGCACAAAGGAAACACACA...GCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR GCA 90 bp AGGGAGAGAAAAGGAGTCCGTGGCGGAGTCTGTGCTTCTCATTCCAGCAGGCGCCCGTGGCGGAGTCTGTaGTTCTCATTCCAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: RERKGVRGGVCASHSSRRPWRSL*FSFQQA
Trigger: CGCCTGCTGGAATGAGAAGCACAGACTCCGCCACGG...GCGCCTGCTGGAATGAGAAGCACAGACTCCGCCACGGACTCCTTTTCTCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CCA 90 bp AGGGAGAGAAAAGGAGTCCGTGGCGGAGTCTGTGCTTCTCATTCCAGCAGGCGCTGCGGCAGTGCTCGATaGCCTCGCGGTAGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: RERKGVRGGVCASHSSRRCGSAR*PRGRSP
Trigger: AGGACTTCTACCGCGAGGCCATCGAGCACTGCCGCA...GCGCCTGCTGGAATGAGAAGCACAGACTCCGCCACGGACTCCTTTTCTCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CCA 90 bp ACCCACCCACAGGGCAGACATTCCACTTGCACAGAGGGGAGGGGGTGGCCCAGCCCCTGTTCTTCCTCCTaGGAATGTCATCCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: THPQGRHSTCTEGRGWPSPCSSS*ECHPPS
Trigger: ACTTGGAGGATGACATTCCCAGGAGGAAGAACAGGG...GCTGGGCCACCCCCTCCCCTCTGTGCAAGTGGAATGTCTGCCCTGTGGGTGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR CCA 90 bp TCTCGGTCCTCCAGGGAAGCGGTGTCCTGGCGTTTCCGGAGACCCCCGATGCCACCCTGTTCTTCCTCCTaGGAATGTCATCCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: SRSSREAVSWRFRRPPMPPCSSS*ECHPPS
Trigger: ACTTGGAGGATGACATTCCCAGGAGGAAGAACAGGG...TGGCATCGGGGGTCTCCGGAAACGCCAGGACACCGCTTCCCTGGAGGACCGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418517.5
CDS-3UTR TCA 90 bp ACCAAGGTTCACATCATGCAGTATCCACCGTGGGCACCAGGAGGGGCGGGTGGAGGTCCTCCAGGATGTTaGGTCTCCGTTTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: TKVHIMQYPPWAPGGAGGGPPGC*VSVSSS
Trigger: GGAGGAAGAAACGGAGACTCAACATCCTGGAGGACC...TCCACCCGCCCCTCCTGGTGCCCACGGTGGATACTGCATGATGTGAACCTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR GCA 90 bp GAGGAGGGAGAGAAAAGGAGTCCGTGGCGGAGTCTGTGCTTCTCATTCCAGCAGCCGTGGCGGAGTCTGTaGTTCTCATTCCAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: EEGEKRSPWRSLCFSFQQPWRSL*FSFQQA
Trigger: CGCCTGCTGGAATGAGAAGCACAGACTCCGCCACGG...CTGCTGGAATGAGAAGCACAGACTCCGCCACGGACTCCTTTTCTCTCCCTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CCA 90 bp AGCCCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCCTGTTCTTCCTCCTaGGAATGTCATCCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: SPWCPFAKGQRGREGGRGPCSSS*ECHPPS
Trigger: ACTTGGAGGATGACATTCCCAGGAGGAAGAACAGGG...GCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR CCA 90 bp CTAGGTGAGGGTGATGTAAGCAGAAGCCTTTTCCTTCAGGTGCCGGAGACAGAGTGGAAGGGCAGGGCGTaGCGTTCGGCGTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LGEGDVSRSLFLQVPETEWKGRA*RSAFSS
Trigger: GGAGGAGAACGCCGAACGCCACGCCCTGCCCTTCCA...CTCTGTCTCCGGCACCTGAAGGAAAAGGCTTCTGCTTACATCACCCTCACCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418517.5
CDS-3UTR CCA 90 bp GAAGCGGTGTCCTGGCGTTTCCGGAGACCCCCGATGCCATATGCCTTTCCTTTGGAGGGGAGAAGCCCCTaGTGTCCATTTGCCAAGGGA +
Preference number: 4 (lower is better)
Translates to: EAVSWRFRRPPMPYAFPLEGRSP*CPFAKG
Trigger: TCCCTTGGCAAATGGACACCAGGGGCTTCTCCCCTC...CAAAGGAAAGGCATATGGCATCGGGGGTCTCCGGAAACGCCAGGACACCGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000418517.5
CDS-3UTR CCA 90 bp CGGTGGACACTCTCAGCAGCGCCCCTCCACCCAGCCAGGCCTTGGAGGACTCTTCACCCAGCCAGGCCTTaGAGGACTCTTTGTATATAT +
Preference number: 4 (lower is better)
Translates to: RWTLSAAPLHPARPWRTLHPARP*RTLCIY
Trigger: ATATATACAAAGAGTCCTCCAAGGCCTGGCTGGGTG...AAGAGTCCTCCAAGGCCTGGCTGGGTGGAGGGGCGCTGCTGAGAGTGTCCACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CCA 90 bp ACCCACCCACAGGGCAGACATTCCACTTGCACAGAGGGGAGGGGGTGGCCCAGCCACCCAGCCAGGCCTTaGAGGACTCTTTGTATATAT +
Preference number: 4 (lower is better)
Translates to: THPQGRHSTCTEGRGWPSHPARP*RTLCIY
Trigger: ATATATACAAAGAGTCCTCCAAGGCCTGGCTGGGTG...GCTGGGCCACCCCCTCCCCTCTGTGCAAGTGGAATGTCTGCCCTGTGGGTGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CCA 90 bp ACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACCCACAGGCCAAGTTCCATAGTGTaGAGACAAATCACACAAATA +
Preference number: 4 (lower is better)
Translates to: TEREGGRERPWPGPPTHRPSSIV*RQITQI
Trigger: TATTTGTGTGATTTGTCTCCACACTATGGAACTTGG...CCTGTGGGTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414789.5
CDS-3UTR CCA 90 bp GCCCCGGCCGGTTCTTATACCGTTTCCCACAGATATCACAGACATACGGCTTGTGGTTCTGAATGGCGGTaGCCATGGCCCGCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: APAGSYTVSHRYHRHTACGSEWR*PWPARL
Trigger: CAGCCGAGCGGGCCATGGCCACCGCCATTCAGAACC...ACAAGCCGTATGTCTGTGATATCTGTGGGAAACGGTATAAGAACCGGCCGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418517.5
CDS-3UTR TCA 90 bp AGCGCCCCTCCACCCAGCCAGGCCTTGGAGGACTCTTTGTATATATTAACTTCTAGTCCGCACAGGAGATaGGGTCCTCGGGACACCCCG +
Preference number: 4 (lower is better)
Translates to: SAPPPSQALEDSLYILTSSPHRR*GPRDTP
Trigger: CGGGGTGTCCCGAGGACCTCATCTCCTGTGCGGACT...AGAAGTTAATATATACAAAGAGTCCTCCAAGGCCTGGCTGGGTGGAGGGGCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR TCA 90 bp CTCAGCAGCGCCCCTCCACCCAGCCAGGCCTTGGAGGACTCTTTGTATATATTAGAAGTCCTCGCGACTTaGGCGGGTTCTGAATGGCGG +
Preference number: 4 (lower is better)
Translates to: LSSAPPPSQALEDSLYILEVLAT*AGSEWR
Trigger: CCGCCATTCAGAACCCGCTCAAGTCGCGAGGACTTC...TAATATATACAAAGAGTCCTCCAAGGCCTGGCTGGGTGGAGGGGCGCTGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412732.5
CDS-3UTR GCA 90 bp AGCCCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCTCCTTCTTCAGGGGTaGTTCACAGTCGATCTTGTA +
Preference number: 4 (lower is better)
Translates to: SPWCPFAKGQRGREGGRGLLLQG*FTVDLV
Trigger: TACAAGATCGACTGTGAAGCACCCCTGAAGAAGGAG...GCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR GCA 90 bp CTCAGCAGCGCCCCTCCACCCAGCCAGGCCTTGGAGGACTCTTTGTATATATTAAAAAGGCTCTGTCCATaGCCCTGGCTGGCACCCACC +
Preference number: 4 (lower is better)
Translates to: LSSAPPPSQALEDSLYILKRLCP*PWLAPT
Trigger: GGTGGGTGCCAGCCAGGGGCATGGACAGAGCCTTTT...TAATATATACAAAGAGTCCTCCAAGGCCTGGCTGGGTGGAGGGGCGCTGCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CCA 90 bp AGCGCCCCTCCACCCAGCCAGGCCTTGGAGGACTCTTTGTATATATTAACTTCTTGCAGCTCCAGAAATTaGGGTTGGGGCGCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: SAPPPSQALEDSLYILTSCSSRN*GWGARR
Trigger: CCGCCGGGCGCCCCAACCCCAATTTCTGGAGCTGCA...AGAAGTTAATATATACAAAGAGTCCTCCAAGGCCTGGCTGGGTGGAGGGGCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CCA 90 bp AGAAAAGGAGTCCGTGGCGGAGTCTGTGCTTCTCATTCCAGCAGGCGCTGGGCGGAGAAAAGGAGTCCGTaGCGGAGTCTGTGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: RKGVRGGVCASHSSRRWAEKRSP*RSLCFS
Trigger: TGAGAAGCACAGACTCCGCCACGGACTCCTTTTCTC...CGCCCAGCGCCTGCTGGAATGAGAAGCACAGACTCCGCCACGGACTCCTTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR TCA 90 bp ACAGTCCATAATGGTCTCCTCCTCCTTCAGCTCAATCTTCTTCTCCCCCGTCTCGACTTGAGCGGGTTCTaGATGGCGGTGGCCATGGCC +
Preference number: 4 (lower is better)
Translates to: TVHNGLLLLQLNLLLPRLDLSGF*MAVAMA
Trigger: GGCCATGGCCACCGCCATTCAGAACCCGCTCAAGTC...GAGACGGGGGAGAAGAAGATTGAGCTGAAGGAGGAGGAGACCATTATGGACTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418517.5
CDS-3UTR TCA 90 bp CTAGGTGAGGGTGATGTAAGCAGAAGCCTTTTCCTTCAGGTGCCGGAGACAGAGGAAGTCCTCGCGACTTaGGCGGGTTCTGAATGGCGG +
Preference number: 4 (lower is better)
Translates to: LGEGDVSRSLFLQVPETEEVLAT*AGSEWR
Trigger: CCGCCATTCAGAACCCGCTCAAGTCGCGAGGACTTC...CTCTGTCTCCGGCACCTGAAGGAAAAGGCTTCTGCTTACATCACCCTCACCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418517.5
CDS-3UTR CCA 90 bp TTTTTAAAACCCGAACAACAAACACACACAACCACAAGAAACAACCACGCCCCCGGAAGGCGCCCACCTTaGGTGGGGCGCGGGACGGCT +
Preference number: 4 (lower is better)
Translates to: FLKPEQQTHTTTRNNHAPGRRPP*VGRGTA
Trigger: AGCCGTCCCGCGCCCCACCCAAGGTGGGCGCCTTCC...GGGGGCGTGGTTGTTTCTTGTGGTTGTGTGTGTTTGTTGTTCGGGTTTTAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR GCA 90 bp GAGGAGGGAGAGAAAAGGAGTCCGTGGCGGAGTCTGTGCTTCTCATTCCAGCAGTGTGTGTTTCCTTTGTaGCTCAGGGACCCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: EEGEKRSPWRSLCFSFQQCVFPL*LRDPGQ
Trigger: TTGGCCTGGGTCCCTGAGGCACAAAGGAAACACACA...CTGCTGGAATGAGAAGCACAGACTCCGCCACGGACTCCTTTTCTCTCCCTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR GCA 90 bp TTTTTAAAACCCGAACAACAAACACACACAACCACAAGAAACAACCACGCCCCCGCCGGCAGAGGCGGGTaGCCGGTGGACACTCTCAGC +
Preference number: 4 (lower is better)
Translates to: FLKPEQQTHTTTRNNHAPAGRGG*PVDTLS
Trigger: GCTGAGAGTGTCCACCGGGCACCCGCCTCTGCCGGC...GGGGGCGTGGTTGTTTCTTGTGGTTGTGTGTGTTTGTTGTTCGGGTTTTAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR GCA 90 bp GAGGAGGGAGAGAAAAGGAGTCCGTGGCGGAGTCTGTGCTTCTCATTCCAGCAGCCAAGGTTCACATCATaGAGTATCCACCGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: EEGEKRSPWRSLCFSFQQPRFTS*SIHRGH
Trigger: GTGCCCACGGTGGATACTGCATGATGTGAACCTTGG...CTGCTGGAATGAGAAGCACAGACTCCGCCACGGACTCCTTTTCTCTCCCTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CCA 90 bp CCTCCACCCAGCCAGGCCTTGGAGGACTCTTTGTATATATTAACTTCTTTTCTTGAGGCGGGTGCCCGGTaGACACTCTCAGCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: PPPSQALEDSLYILTSFLEAGAR*TLSAAP
Trigger: GGGCGCTGCTGAGAGTGTCCACCGGGCACCCGCCTC...AAGAAAAGAAGTTAATATATACAAAGAGTCCTCCAAGGCCTGGCTGGGTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CCA 90 bp TTTTTAAAACCCGAACAACAAACACACACAACCACAAGAAACAACCACGCCCCCCCACGCCCACCGCCCTaGGCACAAGAGGGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: FLKPEQQTHTTTRNNHAPPRPPP*AQEGKA
Trigger: CGCCTTCCCCTCTTGTGCCCAGGGCGGTGGGCGTGG...GGGGGCGTGGTTGTTTCTTGTGGTTGTGTGTGTTTGTTGTTCGGGTTTTAAAAA
56% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR TCA 90 bp AGCGCCCCTCCACCCAGCCAGGCCTTGGAGGACTCTTTGTATATATTAACTTCTATAGAGGAGACTCGGTaGCAAGTGAGGGGGCACTCC +
Preference number: 4 (lower is better)
Translates to: SAPPPSQALEDSLYILTSIEETR*QVRGHS
Trigger: GGAGTGCCCCCTCACTTGTCACCGAGTCTCCTCTAT...AGAAGTTAATATATACAAAGAGTCCTCCAAGGCCTGGCTGGGTGGAGGGGCGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR GCA 90 bp CCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTCAAACCTCACACACGTaGACACATAAATATCTACTG +
Preference number: 4 (lower is better)
Translates to: PWCPFAKGQRGREGGRGPQTSHT*THKYLL
Trigger: CAGTAGATATTTATGTGTGCACGTGTGTGAGGTTTG...AGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414789.5
CDS-3UTR TCA 90 bp AGCGCCCCTCCACCCAGCCAGGCCTTGGAGGACTCTTTGTATATATTAACTTCTGGTCCTCCAGGATGTTaGGTCTCCGTTTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: SAPPPSQALEDSLYILTSGPPGC*VSVSSS
Trigger: GGAGGAAGAAACGGAGACTCAACATCCTGGAGGACC...AGAAGTTAATATATACAAAGAGTCCTCCAAGGCCTGGCTGGGTGGAGGGGCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR GCA 90 bp AGCGCCCCTCCACCCAGCCAGGCCTTGGAGGACTCTTTGTATATATTAACTTCTTCCACCTCGAGGTCATaGGGAAACTCCAGCAACTGC +
Preference number: 4 (lower is better)
Translates to: SAPPPSQALEDSLYILTSSTSRS*GNSSNC
Trigger: GCAGTTGCTGGAGTTTCCGCATGACCTCGAGGTGGA...AGAAGTTAATATATACAAAGAGTCCTCCAAGGCCTGGCTGGGTGGAGGGGCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CCA 90 bp TCTCAGCAGCGCCCCTCCACCCAGCCAGGCCTTGGAGGACTCTTTGTATATATTCCCTGTTCTTCCTCCTaGGAATGTCATCCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: SQQRPSTQPGLGGLFVYIPCSSS*ECHPPS
Trigger: ACTTGGAGGATGACATTCCCAGGAGGAAGAACAGGG...AATATATACAAAGAGTCCTCCAAGGCCTGGCTGGGTGGAGGGGCGCTGCTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CCA 90 bp TTTTTAAAACCCGAACAACAAACACACACAACCACAAGAAACAACCACGCCCCCAGGGAAGCGGTGTCCTaGCGTTTCCGGAGACCCCCG +
Preference number: 4 (lower is better)
Translates to: FLKPEQQTHTTTRNNHAPREAVS*RFRRPP
Trigger: CGGGGGTCTCCGGAAACGCCAGGACACCGCTTCCCT...GGGGGCGTGGTTGTTTCTTGTGGTTGTGTGTGTTTGTTGTTCGGGTTTTAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR TCA 90 bp CCTCCACCCAGCCAGGCCTTGGAGGACTCTTTGTATATATTAACTTCTTTTCTTAGGGTGGGGGAGAATTaGGGAGCTCGGAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: PPPSQALEDSLYILTSFLRVGEN*GARRGR
Trigger: CCTGCCTCTCCGAGCTCCTCAATTCTCCCCCACCCT...AAGAAAAGAAGTTAATATATACAAAGAGTCCTCCAAGGCCTGGCTGGGTGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CCA 90 bp AGCGCCCCTCCACCCAGCCAGGCCTTGGAGGACTCTTTGTATATATTAACTTCTCCCTGTTCTTCCTCCTaGGAATGTCATCCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: SAPPPSQALEDSLYILTSPCSSS*ECHPPS
Trigger: ACTTGGAGGATGACATTCCCAGGAGGAAGAACAGGG...AGAAGTTAATATATACAAAGAGTCCTCCAAGGCCTGGCTGGGTGGAGGGGCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR GCA 90 bp TGTGTGTTTCCTTTGTGCCTCAGGGACCCAGGCCAATTCTTTGTAAAACTGTTTCCCCTGGTGTCCATTTaGCAAGGGACAGAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: CVFPLCLRDPGQFFVKLFPLVSI*QGTERE
Trigger: CTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGG...AAACAGTTTTACAAAGAATTGGCCTGGGTCCCTGAGGCACAAAGGAAACACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418517.5
3UTR CAA 72 bp GACACTCTCAGCAGCGCCCCTCCACCCAGCCAGGCCTaGGAGGACTCTTTGTATATATTAACTTCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: DTLSSAPPPSQA*EDSLYILTSFL
Trigger: AAGAAAAGAAGTTAATATATACAAAGAGTCCTCCAAGGCCTGGCTGGGTGGAGGGGCGCTGCTGAGAGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR TCA 90 bp TTTTTAAAACCCGAACAACAAACACACACAACCACAAGAAACAACCACGCCCCCGGTCCTCCAGGATGTTaGGTCTCCGTTTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: FLKPEQQTHTTTRNNHAPGPPGC*VSVSSS
Trigger: GGAGGAAGAAACGGAGACTCAACATCCTGGAGGACC...GGGGGCGTGGTTGTTTCTTGTGGTTGTGTGTGTTTGTTGTTCGGGTTTTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR GCA 90 bp CCTCCACCCAGCCAGGCCTTGGAGGACTCTTTGTATATATTAACTTCTTTTCTTTGTGTGTTTCCTTTGTaGCTCAGGGACCCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: PPPSQALEDSLYILTSFLCVFPL*LRDPGQ
Trigger: TTGGCCTGGGTCCCTGAGGCACAAAGGAAACACACA...AAGAAAAGAAGTTAATATATACAAAGAGTCCTCCAAGGCCTGGCTGGGTGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CCA 90 bp CCTCCACCCAGCCAGGCCTTGGAGGACTCTTTGTATATATTAACTTCTTTTCTTGAGAAAAGGAGTCCGTaGCGGAGTCTGTGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: PPPSQALEDSLYILTSFLEKRSP*RSLCFS
Trigger: TGAGAAGCACAGACTCCGCCACGGACTCCTTTTCTC...AAGAAAAGAAGTTAATATATACAAAGAGTCCTCCAAGGCCTGGCTGGGTGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS GCA 90 bp CCGGCCCGGGGCGCCGCTGCCGCCGCGCGCGGGCCCAGCCCGGCCTaGGCCGCCCGCTCTGCCGCCCAGCGCGCTACGATTTCATTCATT +
Preference number: 5 (lower is better)
Translates to: PARGAAAAARGPSPA*AARSAAQRATISFI
Trigger: AATGAATGAAATCGTAGCGCGCTGGGCGGCAGAGCGGGCGGCGCAGGCCGGGCTGGGCCCGCGCGCGGCGGCAGCGGCGCCCCGGGCCGG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416611.5
CDS-3UTR CAA 90 bp CAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACCCACAGGGCTGCAGCTCCAGAAATaGGGGTTGGGGCGCCCGGCG +
Preference number: 5 (lower is better)
Translates to: QRGREGGRGPGRAHPPTGLQLQK*GLGRPA
Trigger: CGCCGGGCGCCCCAACCCCAATTTCTGGAGCTGCAG...CCCTGTGGGTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CAA 90 bp GCACAAGAGGGGAAGGCGCCCACCTTGGGTGGGGCGCGGGACGGCTGCAGCTCCCTGCAGCTCCAGAAATaGGGGTTGGGGCGCCCGGCG +
Preference number: 5 (lower is better)
Translates to: AQEGKAPTLGGARDGCSSLQLQK*GLGRPA
Trigger: CGCCGGGCGCCCCAACCCCAATTTCTGGAGCTGCAG...GGAGCTGCAGCCGTCCCGCGCCCCACCCAAGGTGGGCGCCTTCCCCTCTTGTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CAA 90 bp CGGAGTCTGTGCTTCTCATTCCAGCAGGCGCTGGGCGGGGGCCCACCCGGCCCCCTGCAGCTCCAGAAATaGGGGTTGGGGCGCCCGGCG +
Preference number: 5 (lower is better)
Translates to: RSLCFSFQQALGGGPPGPLQLQK*GLGRPA
Trigger: CGCCGGGCGCCCCAACCCCAATTTCTGGAGCTGCAG...GGGGCCGGGTGGGCCCCCGCCCAGCGCCTGCTGGAATGAGAAGCACAGACTCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CAA 90 bp GAGTCTGTGCTTCTCATTCCAGCAGGCGCTGGGCGGGGGCCCACCCGGCCCCACCTGCAGCTCCAGAAATaGGGGTTGGGGCGCCCGGCG +
Preference number: 5 (lower is better)
Translates to: ESVLLIPAGAGRGPTRPHLQLQK*GLGRPA
Trigger: CGCCGGGCGCCCCAACCCCAATTTCTGGAGCTGCAG...GTGGGGCCGGGTGGGCCCCCGCCCAGCGCCTGCTGGAATGAGAAGCACAGACTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CAA 90 bp AGTCTGTGCTTCTCATTCCAGCAGGCGCTGGGCGGGGGCCCACCCGGCCCCACCATGACAGTGGCCATCTaGCTCCCCGGGTCCTGCCCC +
Preference number: 5 (lower is better)
Translates to: SLCFSFQQALGGGPPGPTMTVAI*LPGSCP
Trigger: GGGGCAGGACCCGGGGAGCAAGATGGCCACTGTCAT...GGTGGGGCCGGGTGGGCCCCCGCCCAGCGCCTGCTGGAATGAGAAGCACAGACT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CAA 90 bp CACAAGAGGGGAAGGCGCCCACCTTGGGTGGGGCGCGGGACGGCTGCAGCTCCAATGACAGTGGCCATCTaGCTCCCCGGGTCCTGCCCC +
Preference number: 5 (lower is better)
Translates to: HKRGRRPPWVGRGTAAAPMTVAI*LPGSCP
Trigger: GGGGCAGGACCCGGGGAGCAAGATGGCCACTGTCAT...TGGAGCTGCAGCCGTCCCGCGCCCCACCCAAGGTGGGCGCCTTCCCCTCTTGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CAA 90 bp CGGAGTCTGTGCTTCTCATTCCAGCAGGCGCTGGGCGGGGGCCCACCCGGCCCCGGGCAGACATTCCACTaGCACAGAGGGGAGGGGGTG +
Preference number: 5 (lower is better)
Translates to: RSLCFSFQQALGGGPPGPGQTFH*HRGEGV
Trigger: CACCCCCTCCCCTCTGTGCAAGTGGAATGTCTGCCC...GGGGCCGGGTGGGCCCCCGCCCAGCGCCTGCTGGAATGAGAAGCACAGACTCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CAA 90 bp AGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACCCAGGGCAGACATTCCACTaGCACAGAGGGGAGGGGGTG +
Preference number: 5 (lower is better)
Translates to: RDREGGREGEALAGPTHPGQTFH*HRGEGV
Trigger: CACCCCCTCCCCTCTGTGCAAGTGGAATGTCTGCCC...TGGGTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS GCA 90 bp AGGGCAGTCGCAGGCTGCGCTCGGCGCACAGGCGCGCGTTGTAACTaGGGCAGTGCTCGATGGCCTCGCGGTAGAAGTCCTCGCCTAGGC +
Preference number: 5 (lower is better)
Translates to: RAVAGCARRTGARCN*GSARWPRGRSPRLG
Trigger: GCCTAGGCGAGGACTTCTACCGCGAGGCCATCGAGCACTGCCGCAGTTACAACGCGCGCCTGTGCGCCGAGCGCAGCCTGCGACTGCCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355526.10
ENST00000414789.5
ENST00000420980.7
ENST00000438365.5
ENST00000471976.5
ENST00000614244.4
CDS GCA 90 bp AGGGCAGTCGCAGGCTGCGCTCGGCGCACAGGCGCGCGTTGTAACTaGGGCAGTGCTCGATGGCCTCGCGGTAGAAGTCCTCGCCTAGGG +
Preference number: 5 (lower is better)
Translates to: RAVAGCARRTGARCN*GSARWPRGRSPRLG
Trigger: CCCTAGGCGAGGACTTCTACCGCGAGGCCATCGAGCACTGCCGCAGTTACAACGCGCGCCTGTGCGCCGAGCGCAGCCTGCGACTGCCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416611.5
ENST00000456296.5
ENST00000475938.1
CDS-3UTR CAA 90 bp ACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACCCACAGGGGCTGTGTGTTTCCTTaGTGCCTCAGGGACCCAGGC +
Preference number: 5 (lower is better)
Translates to: TEREGGRERPWPGPPTHRGCVFP*CLRDPG
Trigger: GCCTGGGTCCCTGAGGCACAAAGGAAACACACAGCC...CCTGTGGGTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR CAA 90 bp CCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACGGCTGTGTGTTTCCTTaGTGCCTCAGGGACCCAGGC +
Preference number: 5 (lower is better)
Translates to: PRDREGGREGEALAGPTHGCVFP*CLRDPG
Trigger: GCCTGGGTCCCTGAGGCACAAAGGAAACACACAGCC...GTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR CAA 90 bp CTCGGAGAGGCAGGTAGGCGAGCACCACCCCAGAGTCGCGGCGAGCCGAGCCGGGGCTGTGTGTTTCCTTaGTGCCTCAGGGACCCAGGC +
Preference number: 5 (lower is better)
Translates to: LGEAGRRAPPQSRGEPSRGCVFP*CLRDPG
Trigger: GCCTGGGTCCCTGAGGCACAAAGGAAACACACAGCC...CCGGCTCGGCTCGCCGCGACTCTGGGGTGGTGCTCGCCTACCTGCCTCTCCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR CAA 90 bp ACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACCCACAGGGCCCCTGGTGTCCATTaGCCAAGGGACAGAGAGGGA +
Preference number: 5 (lower is better)
Translates to: TEREGGRERPWPGPPTHRAPGVH*PRDREG
Trigger: TCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGGC...CCTGTGGGTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS GCA 90 bp AGGGCAGTCGCAGGCTGCGCTCGGCGCACAGGCGCGCGTTGTAACTaGGGCAGTGCTCGATGGCCTCGCGGTAGAAGTCCTCGCGACTTG +
Preference number: 5 (lower is better)
Translates to: RAVAGCARRTGARCN*GSARWPRGRSPRDL
Trigger: CAAGTCGCGAGGACTTCTACCGCGAGGCCATCGAGCACTGCCGCAGTTACAACGCGCGCCTGTGCGCCGAGCGCAGCCTGCGACTGCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412732.5
ENST00000418517.5
CDS GCA 90 bp AGGGCAGTCGCAGGCTGCGCTCGGCGCACAGGCGCGCGTTGTAACTaGGGCAGTGCTCGATGGCCTCGCGGTAGAAGTCCTCGCCTAGGA +
Preference number: 5 (lower is better)
Translates to: RAVAGCARRTGARCN*GSARWPRGRSPRLG
Trigger: TCCTAGGCGAGGACTTCTACCGCGAGGCCATCGAGCACTGCCGCAGTTACAACGCGCGCCTGTGCGCCGAGCGCAGCCTGCGACTGCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438060.5
CDS GCA 90 bp AGGGCAGTCGCAGGCTGCGCTCGGCGCACAGGCGCGCGTTGTAACTaGGGCAGTGCTCGATGGCCTCGCGGTAGAAGTCCTCGCCTAGGT +
Preference number: 5 (lower is better)
Translates to: RAVAGCARRTGARCN*GSARWPRGRSPRLG
Trigger: ACCTAGGCGAGGACTTCTACCGCGAGGCCATCGAGCACTGCCGCAGTTACAACGCGCGCCTGTGCGCCGAGCGCAGCCTGCGACTGCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586624.1
CDS-3UTR CAA 90 bp CAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACCCACAGGGGGGTCCTCCAGGATGTaGAGTCTCCGTTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: QRGREGGRGPGRAHPPTGGSSRM*SLRFFL
Trigger: GAGGAAGAAACGGAGACTCAACATCCTGGAGGACCC...CCCTGTGGGTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR CAA 90 bp AGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACCCACCGTCGGGCGCCTTCTaGGCTGTGTGTTTCCTTTGT +
Preference number: 5 (lower is better)
Translates to: RDREGGREGEALAGPTHPPSGAF*AVCFLC
Trigger: ACAAAGGAAACACACAGCCAAGAAGGCGCCCGACGG...TGGGTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR CAA 90 bp CCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGCCGGGCCCACCCACGGGTCCTCCAGGATGTaGAGTCTCCGTTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: PRDREGGREGEALAGPTHGSSRM*SLRFFL
Trigger: GAGGAAGAAACGGAGACTCAACATCCTGGAGGACCC...GTGGGTGGGCCCGGCCAGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR CAA 90 bp GCACAAGAGGGGAAGGCGCCCACCTTGGGTGGGGCGCGGGACGGCTGCAGCTCCGCTTCACAGTCGATCTaGTACTCGCAGGGCCTGAGT +
Preference number: 5 (lower is better)
Translates to: AQEGKAPTLGGARDGCSSASQSI*YSQGLS
Trigger: ACTCAGGCCCTGCGAGTACAAGATCGACTGTGAAGC...GGAGCTGCAGCCGTCCCGCGCCCCACCCAAGGTGGGCGCCTTCCCCTCTTGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CAA 90 bp CTCGGAGAGGCAGGTAGGCGAGCACCACCCCAGAGTCGCGGCGAGCCGAGCCGGGCTTCACAGTCGATCTaGTACTCGCAGGGCCTGAGT +
Preference number: 5 (lower is better)
Translates to: LGEAGRRAPPQSRGEPSRASQSI*YSQGLS
Trigger: ACTCAGGCCCTGCGAGTACAAGATCGACTGTGAAGC...CCGGCTCGGCTCGCCGCGACTCTGGGGTGGTGCTCGCCTACCTGCCTCTCCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR CAA 90 bp GAGTCTGTGCTTCTCATTCCAGCAGGCGCTGGGCGGGGGCCCACCCGGCCCCACCCGTCGGGCGCCTTCTaGGCTGTGTGTTTCCTTTGT +
Preference number: 5 (lower is better)
Translates to: ESVLLIPAGAGRGPTRPHPSGAF*AVCFLC
Trigger: ACAAAGGAAACACACAGCCAAGAAGGCGCCCGACGG...GTGGGGCCGGGTGGGCCCCCGCCCAGCGCCTGCTGGAATGAGAAGCACAGACTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CAA 90 bp GCCCTGGCCGGGCCCACCCACCCACAGGGCAGACATTCCACTTGCACAGAGGGGGCCCCTGGTGTCCATTaGCCAAGGGACAGAGAGGGA +
Preference number: 5 (lower is better)
Translates to: ALAGPTHPQGRHSTCTEGAPGVH*PRDREG
Trigger: TCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGGC...CCCCTCTGTGCAAGTGGAATGTCTGCCCTGTGGGTGGGTGGGCCCGGCCAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR CAA 90 bp AGTCTGTGCTTCTCATTCCAGCAGGCGCTGGGCGGGGGCCCACCCGGCCCCACCGCTTCACAGTCGATCTaGTACTCGCAGGGCCTGAGT +
Preference number: 5 (lower is better)
Translates to: SLCFSFQQALGGGPPGPTASQSI*YSQGLS
Trigger: ACTCAGGCCCTGCGAGTACAAGATCGACTGTGAAGC...GGTGGGGCCGGGTGGGCCCCCGCCCAGCGCCTGCTGGAATGAGAAGCACAGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CAA 90 bp CCCGGTGGACACTCTCAGCAGCGCCCCTCCACCCAGCCAGGCCTTGGAGGACTCCCGTCGGGCGCCTTCTaGGCTGTGTGTTTCCTTTGT +
Preference number: 5 (lower is better)
Translates to: PGGHSQQRPSTQPGLGGLPSGAF*AVCFLC
Trigger: ACAAAGGAAACACACAGCCAAGAAGGCGCCCGACGG...GAGTCCTCCAAGGCCTGGCTGGGTGGAGGGGCGCTGCTGAGAGTGTCCACCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CAA 90 bp ACCCACCCACAGGGCAGACATTCCACTTGCACAGAGGGGAGGGGGTGGCCCAGCGGGCAGACATTCCACTaGCACAGAGGGGAGGGGGTG +
Preference number: 5 (lower is better)
Translates to: THPQGRHSTCTEGRGWPSGQTFH*HRGEGV
Trigger: CACCCCCTCCCCTCTGTGCAAGTGGAATGTCTGCCC...GCTGGGCCACCCCCTCCCCTCTGTGCAAGTGGAATGTCTGCCCTGTGGGTGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR CAA 90 bp CGGTGGACACTCTCAGCAGCGCCCCTCCACCCAGCCAGGCCTTGGAGGACTCTTGGGCAGACATTCCACTaGCACAGAGGGGAGGGGGTG +
Preference number: 5 (lower is better)
Translates to: RWTLSAAPLHPARPWRTLGQTFH*HRGEGV
Trigger: CACCCCCTCCCCTCTGTGCAAGTGGAATGTCTGCCC...AAGAGTCCTCCAAGGCCTGGCTGGGTGGAGGGGCGCTGCTGAGAGTGTCCACCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CAA 90 bp CGGAGTCTGTGCTTCTCATTCCAGCAGGCGCTGGGCGGGGGCCCACCCGGCCCCCCACCCAGCCAGGCCTaGGAGGACTCTTTGTATATA +
Preference number: 5 (lower is better)
Translates to: RSLCFSFQQALGGGPPGPPPSQA*EDSLYI
Trigger: TATATACAAAGAGTCCTCCAAGGCCTGGCTGGGTGG...GGGGCCGGGTGGGCCCCCGCCCAGCGCCTGCTGGAATGAGAAGCACAGACTCCG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CAA 90 bp CCCCCGTCTCTGCACACAGTAGAGCCTCGAGGACCGGCCCTTCCGGGAGGCCACGCTTCACAGTCGATCTaGTACTCGCAGGGCCTGAGT +
Preference number: 5 (lower is better)
Translates to: PPSLHTVEPRGPALPGGHASQSI*YSQGLS
Trigger: ACTCAGGCCCTGCGAGTACAAGATCGACTGTGAAGC...GTGGCCTCCCGGAAGGGCCGGTCCTCGAGGCTCTACTGTGTGCAGAGACGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418517.5
CDS-3UTR CAA 90 bp GCCCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCGGCTGTGTGTTTCCTTaGTGCCTCAGGGACCCAGGC +
Preference number: 5 (lower is better)
Translates to: APGVHLPRDREGGREGEAGCVFP*CLRDPG
Trigger: GCCTGGGTCCCTGAGGCACAAAGGAAACACACAGCC...GGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR CAA 90 bp TCTCGGTCCTCCAGGGAAGCGGTGTCCTGGCGTTTCCGGAGACCCCCGATGCCAGGCTGTGTGTTTCCTTaGTGCCTCAGGGACCCAGGC +
Preference number: 5 (lower is better)
Translates to: SRSSREAVSWRFRRPPMPGCVFP*CLRDPG
Trigger: GCCTGGGTCCCTGAGGCACAAAGGAAACACACAGCC...TGGCATCGGGGGTCTCCGGAAACGCCAGGACACCGCTTCCCTGGAGGACCGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418517.5
CDS-3UTR CAA 90 bp ACCCACCCACAGGGCAGACATTCCACTTGCACAGAGGGGAGGGGGTGGCCCAGCGCCCCTGGTGTCCATTaGCCAAGGGACAGAGAGGGA +
Preference number: 5 (lower is better)
Translates to: THPQGRHSTCTEGRGWPSAPGVH*PRDREG
Trigger: TCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGGC...GCTGGGCCACCCCCTCCCCTCTGTGCAAGTGGAATGTCTGCCCTGTGGGTGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR CAA 90 bp TCTCTGCACACAGTAGAGCCTCGAGGACCGGCCCTTCCGGGAGGCCACCCTCCTGCCCCTGGTGTCCATTaGCCAAGGGACAGAGAGGGA +
Preference number: 5 (lower is better)
Translates to: SLHTVEPRGPALPGGHPPAPGVH*PRDREG
Trigger: TCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGGC...AGGAGGGTGGCCTCCCGGAAGGGCCGGTCCTCGAGGCTCTACTGTGTGCAGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418517.5
CDS-3UTR CAA 90 bp GTGGACACTCTCAGCAGCGCCCCTCCACCCAGCCAGGCCTTGGAGGACTCTTTGGGCTGTGTGTTTCCTTaGTGCCTCAGGGACCCAGGC +
Preference number: 5 (lower is better)
Translates to: VDTLSSAPPPSQALEDSLGCVFP*CLRDPG
Trigger: GCCTGGGTCCCTGAGGCACAAAGGAAACACACAGCC...CAAAGAGTCCTCCAAGGCCTGGCTGGGTGGAGGGGCGCTGCTGAGAGTGTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CAA 90 bp CAGGGAAGCGGTGTCCTGGCGTTTCCGGAGACCCCCGATGCCATATGCCTTTCCGGGCAGACATTCCACTaGCACAGAGGGGAGGGGGTG +
Preference number: 5 (lower is better)
Translates to: QGSGVLAFPETPDAICLSGQTFH*HRGEGV
Trigger: CACCCCCTCCCCTCTGTGCAAGTGGAATGTCTGCCC...GGAAAGGCATATGGCATCGGGGGTCTCCGGAAACGCCAGGACACCGCTTCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000418517.5
CDS-3UTR CAA 90 bp AGCCCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCGCCCCTGGTGTCCATTaGCCAAGGGACAGAGAGGGA +
Preference number: 5 (lower is better)
Translates to: SPWCPFAKGQRGREGGRGAPGVH*PRDREG
Trigger: TCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGGC...GCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR CAA 90 bp GCCCTGGCCGGGCCCACCCACCCACAGGGCAGACATTCCACTTGCACAGAGGGGCCACCCAGCCAGGCCTaGGAGGACTCTTTGTATATA +
Preference number: 5 (lower is better)
Translates to: ALAGPTHPQGRHSTCTEGPPSQA*EDSLYI
Trigger: TATATACAAAGAGTCCTCCAAGGCCTGGCTGGGTGG...CCCCTCTGTGCAAGTGGAATGTCTGCCCTGTGGGTGGGTGGGCCCGGCCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CAA 90 bp GCCCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCGCTTCACAGTCGATCTaGTACTCGCAGGGCCTGAGT +
Preference number: 5 (lower is better)
Translates to: APGVHLPRDREGGREGEAASQSI*YSQGLS
Trigger: ACTCAGGCCCTGCGAGTACAAGATCGACTGTGAAGC...GGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS CCA 90 bp GGAGGCCCAGACTCTGGGGAGACCCAGTCACGCCCTCAGATGCCCTaGGATGCACAGCAGGAGACACGGTCAGAACTTTGGATACACCAG +
Preference number: 5 (lower is better)
Translates to: GGPDSGETQSRPQMP*DAQQETRSELWIHQ
Trigger: CTGGTGTATCCAAAGTTCTGACCGTGTCTCCTGCTGTGCATCCCAGGGCATCTGAGGGCGTGACTGGGTCTCCCCAGAGTCTGGGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473716.5
CDS-3UTR CAA 90 bp CCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCCTGGGTCCTCCAGGATGTaGAGTCTCCGTTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: PWCPFAKGQRGREGGRGPGSSRM*SLRFFL
Trigger: GAGGAAGAAACGGAGACTCAACATCCTGGAGGACCC...AGGGCCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS-3UTR CAA 90 bp AAGCCCCTGGTGTCCATTTGCCAAGGGACAGAGAGGGAGGGAGGGAGGGAGAGGCCGTCGGGCGCCTTCTaGGCTGTGTGTTTCCTTTGT +
Preference number: 5 (lower is better)
Translates to: KPLVSICQGTEREGGRERPSGAF*AVCFLC
Trigger: ACAAAGGAAACACACAGCCAAGAAGGCGCCCGACGG...CCTCTCCCTCCCTCCCTCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000456296.5
ENST00000614244.4
CDS CCA 90 bp AGTCCTCGCCTAGGACACACTCCACATCCCAAGACAAAGGTAGTGTaGACTTCACTCCAGTTGCCAAGGCCCCCGCACCCCCGGGTCATT +
Preference number: 5 (lower is better)
Translates to: SPRLGHTPHPKTKVV*TSLQLPRPPHPRVI
Trigger: AATGACCCGGGGGTGCGGGGGCCTTGGCAACTGGAGTGAAGTCCACACTACCTTTGTCTTGGGATGTGGAGTGTGTCCTAGGCGAGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000438060.5
CDS-3UTR CAA 90 bp AGGGAGAGAAAAGGAGTCCGTGGCGGAGTCTGTGCTTCTCATTCCAGCAGGCGCGCTTCACAGTCGATCTaGTACTCGCAGGGCCTGAGT +
Preference number: 5 (lower is better)
Translates to: RERKGVRGGVCASHSSRRASQSI*YSQGLS
Trigger: ACTCAGGCCCTGCGAGTACAAGATCGACTGTGAAGC...GCGCCTGCTGGAATGAGAAGCACAGACTCCGCCACGGACTCCTTTTCTCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CAA 90 bp AGCGCCCCTCCACCCAGCCAGGCCTTGGAGGACTCTTTGTATATATTAACTTCTGGCTGTGTGTTTCCTTaGTGCCTCAGGGACCCAGGC +
Preference number: 5 (lower is better)
Translates to: SAPPPSQALEDSLYILTSGCVFP*CLRDPG
Trigger: GCCTGGGTCCCTGAGGCACAAAGGAAACACACAGCC...AGAAGTTAATATATACAAAGAGTCCTCCAAGGCCTGGCTGGGTGGAGGGGCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CAA 90 bp GAGGAGGGAGAGAAAAGGAGTCCGTGGCGGAGTCTGTGCTTCTCATTCCAGCAGCCACCCAGCCAGGCCTaGGAGGACTCTTTGTATATA +
Preference number: 5 (lower is better)
Translates to: EEGEKRSPWRSLCFSFQQPPSQA*EDSLYI
Trigger: TATATACAAAGAGTCCTCCAAGGCCTGGCTGGGTGG...CTGCTGGAATGAGAAGCACAGACTCCGCCACGGACTCCTTTTCTCTCCCTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CAA 90 bp TCTCAGCAGCGCCCCTCCACCCAGCCAGGCCTTGGAGGACTCTTTGTATATATTCCACCCAGCCAGGCCTaGGAGGACTCTTTGTATATA +
Preference number: 5 (lower is better)
Translates to: SQQRPSTQPGLGGLFVYIPPSQA*EDSLYI
Trigger: TATATACAAAGAGTCCTCCAAGGCCTGGCTGGGTGG...AATATATACAAAGAGTCCTCCAAGGCCTGGCTGGGTGGAGGGGCGCTGCTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CAA 90 bp CCTCCACCCAGCCAGGCCTTGGAGGACTCTTTGTATATATTAACTTCTTTTCTTGGGCAGACATTCCACTaGCACAGAGGGGAGGGGGTG +
Preference number: 5 (lower is better)
Translates to: PPPSQALEDSLYILTSFLGQTFH*HRGEGV
Trigger: CACCCCCTCCCCTCTGTGCAAGTGGAATGTCTGCCC...AAGAAAAGAAGTTAATATATACAAAGAGTCCTCCAAGGCCTGGCTGGGTGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS CCA 90 bp CCTCAGATGCCCTGGGATGCACAGCAGGAGACACGGTCAGAACTTTaGATACACCAGAAAGCCTCAGAAAAAGACACAGTTAGGCCATCA +
Preference number: 5 (lower is better)
Translates to: PQMPWDAQQETRSEL*IHQKASEKDTVRPS
Trigger: TGATGGCCTAACTGTGTCTTTTTCTGAGGCTTTCTGGTGTATCCAAAGTTCTGACCGTGTCTCCTGCTGTGCATCCCAGGGCATCTGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473716.5
CDS-3UTR CAA 90 bp TTTTTAAAACCCGAACAACAAACACACACAACCACAAGAAACAACCACGCCCCCGCCCCTGGTGTCCATTaGCCAAGGGACAGAGAGGGA +
Preference number: 5 (lower is better)
Translates to: FLKPEQQTHTTTRNNHAPAPGVH*PRDREG
Trigger: TCCCTCTCTGTCCCTTGGCAAATGGACACCAGGGGC...GGGGGCGTGGTTGTTTCTTGTGGTTGTGTGTGTTTGTTGTTCGGGTTTTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS-3UTR CAA 90 bp TTTTTAAAACCCGAACAACAAACACACACAACCACAAGAAACAACCACGCCCCCCCGTCGGGCGCCTTCTaGGCTGTGTGTTTCCTTTGT +
Preference number: 5 (lower is better)
Translates to: FLKPEQQTHTTTRNNHAPPSGAF*AVCFLC
Trigger: ACAAAGGAAACACACAGCCAAGAAGGCGCCCGACGG...GGGGGCGTGGTTGTTTCTTGTGGTTGTGTGTGTTTGTTGTTCGGGTTTTAAAAA
50% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000412732.5
ENST00000416611.5
ENST00000420980.7
ENST00000614244.4
CDS CCA 90 bp CAGACACACACCAGAAACACATCACCCACACAAAGACACACAACATaGAAACATCACACCACACACACATACACCCCCTCATGCATCCAA +
Preference number: 5 (lower is better)
Translates to: QTHTRNTSPTQRHTT*KHHTTHTYTPSCIQ
Trigger: TTGGATGCATGAGGGGGTGTATGTGTGTGTGGTGTGATGTTTCCATGTTGTGTGTCTTTGTGTGGGTGATGTGTTTCTGGTGTGTGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414789.5
CDS TCA 90 bp CACGATACAGAAACAAACAAAAACACACCGGGACGTATCCCTACCTaGACACATGCAGACACACAACACAAATCACACACAGTCACACGG +
Preference number: 5 (lower is better)
Translates to: HDTETNKNTPGRIPT*THADTQHKSHTVTR
Trigger: CCGTGTGACTGTGTGTGATTTGTGTTGTGTGTCTGCATGTGTTCAGGTAGGGATACGTCCCGGTGTGTTTTTGTTTGTTTCTGTATCGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414789.5
CDS GCA 90 bp AGAAACAAACAAAAACACACCGGGACGTATCCCTACCTGAACACATaGAGACACACAACACAAATCACACACAGTCACACGGGATTCACA +
Preference number: 5 (lower is better)
Translates to: RNKQKHTGTYPYLNT*RHTTQITHSHTGFT
Trigger: TGTGAATCCCGTGTGACTGTGTGTGATTTGTGTTGTGTGTCTGCATGTGTTCAGGTAGGGATACGTCCCGGTGTGTTTTTGTTTGTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414789.5
CDS GCA 72 bp CGCCGGTCTGCGAGTCGAGGAAGGGCAGTCGCAGGCTaGGCTCGGCGCACAGGCGCGCGTTGTAACTGCGGC +
Preference number: 6 (lower is better)
Translates to: RRSASRGRAVAG*ARRTGARCNCG
Trigger: GCCGCAGTTACAACGCGCGCCTGTGCGCCGAGCGCAGCCTGCGACTGCCCTTCCTCGACTCGCAGACCGGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000355526.10
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000438060.5
ENST00000438365.5
ENST00000456296.5
ENST00000471976.5
ENST00000475938.1
ENST00000586624.1
ENST00000614244.4
CDS TCA 72 bp CCTCGCGGTAGAAGTCCTCGCGACTTGAGCGGGTTCTaGATGGCGGTGGCCATGGCCCGCTCGGCTGGGCCG +
Preference number: 6 (lower is better)
Translates to: PRGRSPRDLSGF*MAVAMARSAGP
Trigger: CGGCCCAGCCGAGCGGGCCATGGCCACCGCCATTCAGAACCCGCTCAAGTCGCGAGGACTTCTACCGCGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412732.5
ENST00000418517.5
CDS GCA 72 bp GCAGGCTGCGCTCGGCGCACAGGCGCGCGTTGTAACTaGGGCAGTGCTCGATGGCCTCGCGGTAGAAGTCCT +
Preference number: 6 (lower is better)
Translates to: AGCARRTGARCN*GSARWPRGRSP
Trigger: AGGACTTCTACCGCGAGGCCATCGAGCACTGCCGCAGTTACAACGCGCGCCTGTGCGCCGAGCGCAGCCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000355526.10
ENST00000412732.5
ENST00000414789.5
ENST00000416611.5
ENST00000418517.5
ENST00000420980.7
ENST00000438060.5
ENST00000438365.5
ENST00000456296.5
ENST00000471976.5
ENST00000475938.1
ENST00000586624.1
ENST00000614244.4
CDS GCA 72 bp GCCCAGACTCTGGGGAGACCCAGTCACGCCCTCAGATaGCCTGGGATGCACAGCAGGAGACACGGTCAGAAC +
Preference number: 6 (lower is better)
Translates to: AQTLGRPSHALR*PGMHSRRHGQN
Trigger: GTTCTGACCGTGTCTCCTGCTGTGCATCCCAGGGCATCTGAGGGCGTGACTGGGTCTCCCCAGAGTCTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473716.5
CDS CCA 72 bp CGTTTATGGTTGTTTTTCCGGTGGAAGGGCAGGGCGTaGCGTTCGGCGTTCTCCTCCCCCTCCTCCTCGGCC +
Preference number: 6 (lower is better)
Translates to: RLWLFFRWKGRA*RSAFSSPSSSA
Trigger: GGCCGAGGAGGAGGGGGAGGAGAACGCCGAACGCCACGCCCTGCCCTTCCACCGGAAAAACAACCATAAACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000475938.1
CDS CCA 72 bp GGTTTATGGTTGTTTTTCCGGTGGAAGGGCAGGGCGTaGCGTTCGGCGTTCTCCTCCCCCTCCTCCTCGGCC +
Preference number: 6 (lower is better)
Translates to: GLWLFFRWKGRA*RSAFSSPSSSA
Trigger: GGCCGAGGAGGAGGGGGAGGAGAACGCCGAACGCCACGCCCTGCCCTTCCACCGGAAAAACAACCATAAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000472656.5
CDS TCA 72 bp AGCGGTAGGTCCGCACGGCTGCCGTCATGTTCACCGTaGATTGTAAACACGAGGGGTGTCCTGGGGGCCAAG +
Preference number: 6 (lower is better)
Translates to: SGRSARLPSCSP*IVNTRGVLGAK
Trigger: CTTGGCCCCCAGGACACCCCTCGTGTTTACAATTCACGGTGAACATGACGGCAGCCGTGCGGACCTACCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488378.1
CDS CCA 72 bp TGGCCTGCCAGCTCACGTTTATGGTTGTTTTTCCGGTaGAAGGGCAGGGCGTGGCGTTCGGCGTTCTCCTCC +
Preference number: 6 (lower is better)
Translates to: WPASSRLWLFFR*KGRAWRSAFSS
Trigger: GGAGGAGAACGCCGAACGCCACGCCCTGCCCTTCCACCGGAAAAACAACCATAAACGTGAGCTGGCAGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475938.1
CDS CCA 72 bp GACTCTGGGGAGACCCAGTCACGCCCTCAGATGCCCTaGGATGCACAGCAGGAGACACGGTCAGAACTTTGG +
Preference number: 6 (lower is better)
Translates to: DSGETQSRPQMP*DAQQETRSELW
Trigger: CCAAAGTTCTGACCGTGTCTCCTGCTGTGCATCCCAGGGCATCTGAGGGCGTGACTGGGTCTCCCCAGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473716.5
CDS CAA 90 bp CACACTCCACATCCCAAGACAAAGGTAGTGTGGACTTCACTCCAGTaGCCAAGGCCCCCGCACCCCCGGGTCATTTCAGTCTCTCCCAGA +
Preference number: 6 (lower is better)
Translates to: HTPHPKTKVVWTSLQ*PRPPHPRVISVSPR
Trigger: TCTGGGAGAGACTGAAATGACCCGGGGGTGCGGGGGCCTTGGCAACTGGAGTGAAGTCCACACTACCTTTGTCTTGGGATGTGGAGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000438060.5
CDS CAA 72 bp CCCCCGGGTCATTTCAGTCTCTCCCAGACCCGAGGGTaGCAGGGAAGGGATGATGTCTCCCTTCCCCAAAAA +
Preference number: 6 (lower is better)
Translates to: PPGHFSLSQTRG*QGRDDVSLPQK
Trigger: TTTTTGGGGAAGGGAGACATCATCCCTTCCCTGCAACCCTCGGGTCTGGGAGAGACTGAAATGACCCGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438060.5
CDS CAA 72 bp CATCCCAAGACAAAGGTAGTGTGGACTTCACTCCAGTaGCCAAGGCCCCCGCACCCCCGGGTCATTTCAGTC +
Preference number: 6 (lower is better)
Translates to: HPKTKVVWTSLQ*PRPPHPRVISV
Trigger: GACTGAAATGACCCGGGGGTGCGGGGGCCTTGGCAACTGGAGTGAAGTCCACACTACCTTTGTCTTGGGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000438060.5
CDS GCA 72 bp GCCGTCGGGCGCCTTCTTGGCTGTGTGTTTCCTTTGTaGCTCAGGGACCCAGGCCAATTCTTTGTAAAACTC +
Preference number: 6 (lower is better)
Translates to: AVGRLLGCVFPL*LRDPGQFFVKL
Trigger: GAGTTTTACAAAGAATTGGCCTGGGTCCCTGAGGCACAAAGGAAACACACAGCCAAGAAGGCGCCCGACGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494031.5
CDS GCA 72 bp GCCGTCGGGCGCCTTCTTGGCTGTGTGTTTCCTTTGTaGCTCAGGGACCCAGGCCAATTCTTTGTAAAACTT +
Preference number: 6 (lower is better)
Translates to: AVGRLLGCVFPL*LRDPGQFFVKL
Trigger: AAGTTTTACAAAGAATTGGCCTGGGTCCCTGAGGCACAAAGGAAACACACAGCCAAGAAGGCGCCCGACGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420980.7
CDS CCA 72 bp CCTTGGAGACACCCAGACACAGGGAGGAGACATAGCTaGACCCATGGGTACACTCAGAAATGCTCAGAGACA +
Preference number: 6 (lower is better)
Translates to: PWRHPDTGRRHS*THGYTQKCSET
Trigger: TGTCTCTGAGCATTTCTGAGTGTACCCATGGGTCCAGCTATGTCTCCTCCCTGTGTCTGGGTGTCTCCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473716.5
CDS CAA 72 bp GCCCTGGGATGCACAGCAGGAGACACGGTCAGAACTTaGGATACACCAGAAAGCCTCAGAAAAAGACACAGT +
Preference number: 6 (lower is better)
Translates to: ALGCTAGDTVRT*DTPESLRKRHS
Trigger: ACTGTGTCTTTTTCTGAGGCTTTCTGGTGTATCCAAAGTTCTGACCGTGTCTCCTGCTGTGCATCCCAGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473716.5
CDS CCA 72 bp CCCTGGGATGCACAGCAGGAGACACGGTCAGAACTTTaGATACACCAGAAAGCCTCAGAAAAAGACACAGTT +
Preference number: 6 (lower is better)
Translates to: PWDAQQETRSEL*IHQKASEKDTV
Trigger: AACTGTGTCTTTTTCTGAGGCTTTCTGGTGTATCCAAAGTTCTGACCGTGTCTCCTGCTGTGCATCCCAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473716.5
CDS GCA 72 bp CAAAAACACACCGGGACGTATCCCTACCTGAACACATaGAGACACACAACACAAATCACACACAGTCACACG +
Preference number: 6 (lower is better)
Translates to: QKHTGTYPYLNT*RHTTQITHSHT
Trigger: CGTGTGACTGTGTGTGATTTGTGTTGTGTGTCTGCATGTGTTCAGGTAGGGATACGTCCCGGTGTGTTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414789.5