RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DPEP3 (Homo sapiens)

Ensembl gene IDs: ENSG00000141096

Ensembl transcript IDs: ENST00000268793.6, ENST00000574342.1, ENST00000672962.1

Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR TCA 90 bp AGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACTGGCAGATACCGCCGGCTaGGCGCGCGGGAACCCTCGC +
Preference number: 4 (lower is better)
Translates to: RRGGFVRLCHSDLCGDRLADTAG*ARGNPR
Trigger: GCGAGGGTTCCCGCGCGCTCAGCCGGCGGTATCTGC...CAGTCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR GCA 90 bp AGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACTGTCGCGGCCCGTGGGCTaGATGTTGCGCGGGGGTCGG +
Preference number: 4 (lower is better)
Translates to: RRGGFVRLCHSDLCGDRLSRPVG*MLRGGR
Trigger: CCGACCCCCGCGCAACATGCAGCCCACGGGCCGCGA...CAGTCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR CCA 90 bp AGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACTGGCGTGGAGAGGGCTCTaGGGGCGCCCGGCGTGGTCT +
Preference number: 4 (lower is better)
Translates to: RRGGFVRLCHSDLCGDRLAWRGL*GRPAWS
Trigger: AGACCACGCCGGGCGCCCCCAGAGCCCTCTCCACGC...CAGTCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR TCA 90 bp AGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACTGGGACACCCGGCGTGGTaGAGAGGCTGGGGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: RRGGFVRLCHSDLCGDRLGHPAW*RGWGSP
Trigger: TGGGCTCCCCCAGCCTCTTCACCACGCCGGGTGTCC...CAGTCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR GCA 90 bp ACTAGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGATCGCGGCCCGTGGGCTaGATGTTGCGCGGGGGTCGG +
Preference number: 4 (lower is better)
Translates to: TRRGGFVRLCHSDLCGDRSRPVG*MLRGGR
Trigger: CCGACCCCCGCGCAACATGCAGCCCACGGGCCGCGA...TCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCTAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR GCA 90 bp AGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACTGCTCCGCATCAGGGCCTaGGCGCGACCCCGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: RRGGFVRLCHSDLCGDRLLRIRA*ARPRRS
Trigger: GGACCTTCGGGGTCGCGCGCAGGCCCTGATGCGGAG...CAGTCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR CCA 90 bp ACTAGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGATCGGCCGCGGGAGCCTaGGAGGAGCAGGCGATGGGC +
Preference number: 4 (lower is better)
Translates to: TRRGGFVRLCHSDLCGDRSAAGA*EEQAMG
Trigger: GCCCATCGCCTGCTCCTCCCAGGCTCCCGCGGCCGA...TCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCTAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR CCA 90 bp ACTAGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGAGCGTGGAGAGGGCTCTaGGGGCGCCCGGCGTGGTCT +
Preference number: 4 (lower is better)
Translates to: TRRGGFVRLCHSDLCGDRAWRGL*GRPAWS
Trigger: AGACCACGCCGGGCGCCCCCAGAGCCCTCTCCACGC...TCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCTAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR TCA 90 bp ACTAGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGAGGACACCCGGCGTGGTaGAGAGGCTGGGGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: TRRGGFVRLCHSDLCGDRGHPAW*RGWGSP
Trigger: TGGGCTCCCCCAGCCTCTTCACCACGCCGGGTGTCC...TCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCTAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR TCA 90 bp AGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACTGACATCCTCCAGCCCCTaGGGGAACCGGCCAGTCCCG +
Preference number: 4 (lower is better)
Translates to: RRGGFVRLCHSDLCGDRLTSSSP*GNRPVP
Trigger: CGGGACTGGCCGGTTCCCTCAGGGGCTGGAGGATGT...CAGTCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR GCA 90 bp ACTAGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACTCCGCATCAGGGCCTaGGCGCGACCCCGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: TRRGGFVRLCHSDLCGDRLRIRA*ARPRRS
Trigger: GGACCTTCGGGGTCGCGCGCAGGCCCTGATGCGGAG...TCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCTAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR TCA 90 bp AGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACTGGAGGCTGCTGTCCAGTaGGTGACCACCCTCCACGCC +
Preference number: 4 (lower is better)
Translates to: RRGGFVRLCHSDLCGDRLEAAVQ*VTTLHA
Trigger: GGCGTGGAGGGTGGTCACTCACTGGACAGCAGCCTC...CAGTCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR TCA 90 bp ACTAGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGAACATCCTCCAGCCCCTaGGGGAACCGGCCAGTCCCG +
Preference number: 4 (lower is better)
Translates to: TRRGGFVRLCHSDLCGDRTSSSP*GNRPVP
Trigger: CGGGACTGGCCGGTTCCCTCAGGGGCTGGAGGATGT...TCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCTAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR GCA 90 bp ACTAGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGAGCGCGGGTTACGGGCTaGCGCAGCAGCAGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: TRRGGFVRLCHSDLCGDRARVTG*RSSSSS
Trigger: ACTGCTGCTGCTGCTGCGGCAGCCCGTAACCCGCGC...TCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCTAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR CCA 90 bp AGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACTGGGGAGGAGCAGGCGATaGGCAGAGGCCGACAATGGG +
Preference number: 4 (lower is better)
Translates to: RRGGFVRLCHSDLCGDRLGRSRR*AEADNG
Trigger: CCCATTGTCGGCCTCTGCCCATCGCCTGCTCCTCCC...CAGTCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR CCA 90 bp AGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACTGTGGCGTAGTGAGGCCTaGGGTAGTGAGGGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: RRGGFVRLCHSDLCGDRLWRSEA*GSEGAG
Trigger: CCCAGCGCCCTCACTACCCCAGGCCTCACTACGCCA...CAGTCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR TCA 90 bp AGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACTGATGGGGTCCGGATCATaGCGACCCAGCCTCCCGAAG +
Preference number: 4 (lower is better)
Translates to: RRGGFVRLCHSDLCGDRLMGSGS*RPSLPK
Trigger: CTTCGGGAGGCTGGGTCGTCATGATCCGGACCCCAT...CAGTCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR TCA 90 bp ACTAGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGAGAGGCTGCTGTCCAGTaGGTGACCACCCTCCACGCC +
Preference number: 4 (lower is better)
Translates to: TRRGGFVRLCHSDLCGDREAAVQ*VTTLHA
Trigger: GGCGTGGAGGGTGGTCACTCACTGGACAGCAGCCTC...TCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCTAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR TCA 90 bp AGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACTGGCCTGGTGTCCATTCTaGGGCACGAGGTGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: RRGGFVRLCHSDLCGDRLAWCPF*GTRWEW
Trigger: CCACTCCCACCTCGTGCCTCAGAATGGACACCAGGC...CAGTCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR TCA 90 bp AGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACTGGAGGCTTTGCCACAGTaGCCTCTGCGGGGACCGACT +
Preference number: 4 (lower is better)
Translates to: RRGGFVRLCHSDLCGDRLEALPQ*PLRGPT
Trigger: AGTCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTC...CAGTCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR TCA 90 bp AGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACTGGAAGTCACGCGACTCTaGGACCGACGCGCCACGCAA +
Preference number: 4 (lower is better)
Translates to: RRGGFVRLCHSDLCGDRLEVTRL*DRRATQ
Trigger: TTGCGTGGCGCGTCGGTCTCAGAGTCGCGTGACTTC...CAGTCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672962.1
CDS-3UTR CCA 90 bp ACTAGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGAGGGAGGAGCAGGCGATaGGCAGAGGCCGACAATGGG +
Preference number: 4 (lower is better)
Translates to: TRRGGFVRLCHSDLCGDRGRSRR*AEADNG
Trigger: CCCATTGTCGGCCTCTGCCCATCGCCTGCTCCTCCC...TCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCTAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR CCA 90 bp AGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACTGGAGGCTGACCAGAACTaGGCACCCACGAGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: RRGGFVRLCHSDLCGDRLEADQN*APTRPS
Trigger: AGACGGCCTCGTGGGTGCCCAGTTCTGGTCAGCCTC...CAGTCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR TCA 90 bp AGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACTGCACCCTCCACGCCAATaGGGCAGGCCAGCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: RRGGFVRLCHSDLCGDRLHPPRQ*GRPAFE
Trigger: CTCAAAAGCTGGCCTGCCTCATTGGCGTGGAGGGTG...CAGTCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR TCA 90 bp ACTAGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGAGCCTGGTGTCCATTCTaGGGCACGAGGTGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: TRRGGFVRLCHSDLCGDRAWCPF*GTRWEW
Trigger: CCACTCCCACCTCGTGCCTCAGAATGGACACCAGGC...TCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCTAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR TCA 90 bp ACTAGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGAGTATGGGGAGGCATTTaGGGACCTCCAGGGGACCCG +
Preference number: 4 (lower is better)
Translates to: TRRGGFVRLCHSDLCGDRVWGGI*GPPGDP
Trigger: CGGGTCCCCTGGAGGTCCTCAAATGCCTCCCCATAC...TCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCTAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR TCA 90 bp AGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACTGAGCAGAGCCACTGGGTaGAGGTTGGGATGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RRGGFVRLCHSDLCGDRLSRATG*RLGWWQ
Trigger: CTGCCACCATCCCAACCTTCACCCAGTGGCTCTGCT...CAGTCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR GCA 90 bp AGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACTGCGGGGCTCTGCGCCCTaGTCTCCTCTCTCACCTTTT +
Preference number: 4 (lower is better)
Translates to: RRGGFVRLCHSDLCGDRLRGSAP*SPLSPF
Trigger: AAAAGGTGAGAGAGGAGAGCAGGGCGCAGAGCCCCG...CAGTCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR CCA 90 bp AGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACTGGGCAGAGGCCGACAATaGGGTCCGGATCATGACGAC +
Preference number: 4 (lower is better)
Translates to: RRGGFVRLCHSDLCGDRLGRGRQ*GPDHDD
Trigger: GTCGTCATGATCCGGACCCCATTGTCGGCCTCTGCC...CAGTCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR CCA 90 bp AGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACTGGTCTGGTCCTGGGACTaGCATGAGACGGAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: RRGGFVRLCHSDLCGDRLVWSWD*HETEAD
Trigger: GTCAGCCTCCGTCTCATGCCAGTCCCAGGACCAGAC...CAGTCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR CCA 90 bp AGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACTGACGGCAGTCTGGTCCTaGGACTGGCATGAGACGGAG +
Preference number: 4 (lower is better)
Translates to: RRGGFVRLCHSDLCGDRLTAVWS*DWHETE
Trigger: CTCCGTCTCATGCCAGTCCCAGGACCAGACTGCCGT...CAGTCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR CCA 90 bp ACTAGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGAAGGCGCACGGCAGTCTaGTCCTGGGACTGGCATGAG +
Preference number: 4 (lower is better)
Translates to: TRRGGFVRLCHSDLCGDRRRTAV*SWDWHE
Trigger: CTCATGCCAGTCCCAGGACCAGACTGCCGTGCGCCT...TCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCTAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR CCA 90 bp AGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACTGGGCACGAGGTGGGAGTaGCAGGATGTGCTCAGTTGC +
Preference number: 4 (lower is better)
Translates to: RRGGFVRLCHSDLCGDRLGTRWE*QDVLSC
Trigger: GCAACTGAGCACATCCTGCCACTCCCACCTCGTGCC...CAGTCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR TCA 90 bp ACTAGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACACCCTCCACGCCAATaGGGCAGGCCAGCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: TRRGGFVRLCHSDLCGDRHPPRQ*GRPAFE
Trigger: CTCAAAAGCTGGCCTGCCTCATTGGCGTGGAGGGTG...TCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCTAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR TCA 90 bp ACTAGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGAGGAGAGGGGGCTTTGTaGGGCTTTGCCACAGTGACC +
Preference number: 4 (lower is better)
Translates to: TRRGGFVRLCHSDLCGDRGEGAL*GFATVT
Trigger: GGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCC...TCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCTAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR GCA 90 bp ACTAGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACGGGGCTCTGCGCCCTaGTCTCCTCTCTCACCTTTT +
Preference number: 4 (lower is better)
Translates to: TRRGGFVRLCHSDLCGDRRGSAP*SPLSPF
Trigger: AAAAGGTGAGAGAGGAGAGCAGGGCGCAGAGCCCCG...TCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCTAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR GCA 90 bp ACTAGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGATGCCACAGTGACCTCTaGGGGGACCGACTGTGTCAG +
Preference number: 4 (lower is better)
Translates to: TRRGGFVRLCHSDLCGDRCHSDL*GDRLCQ
Trigger: CTGACACAGTCGGTCCCCGCAGAGGTCACTGTGGCA...TCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCTAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR GCA 90 bp AGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACTGGGCTTTGTGAGGCTTTaGCACAGTGACCTCTGCGGG +
Preference number: 4 (lower is better)
Translates to: RRGGFVRLCHSDLCGDRLGFVRL*HSDLCG
Trigger: CCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCC...CAGTCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR CCA 90 bp ACTAGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGAGGCAGAGGCCGACAATaGGGTCCGGATCATGACGAC +
Preference number: 4 (lower is better)
Translates to: TRRGGFVRLCHSDLCGDRGRGRQ*GPDHDD
Trigger: GTCGTCATGATCCGGACCCCATTGTCGGCCTCTGCC...TCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCTAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR CCA 90 bp AGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACTGTCCAGGGGACCCGATTaGTTGGCTGCTTGGTCACCT +
Preference number: 4 (lower is better)
Translates to: RRGGFVRLCHSDLCGDRLSRGPD*LAAWSP
Trigger: AGGTGACCAAGCAGCCAACCAATCGGGTCCCCTGGA...CAGTCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR CCA 90 bp AGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACTGAGCAGCCACAAGGCCTaGAACAAGGTATGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: RRGGFVRLCHSDLCGDRLSSHKA*NKVWGG
Trigger: GCCTCCCCATACCTTGTTCCAGGCCTTGTGGCTGCT...CAGTCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR TCA 90 bp ACTAGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGATCCCGAAGAGGGGGTTaGAGTCACGCGACTCTGAGA +
Preference number: 4 (lower is better)
Translates to: TRRGGFVRLCHSDLCGDRSRRGG*SHATLR
Trigger: TCTCAGAGTCGCGTGACTTCAACCCCCTCTTCGGGA...TCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCTAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000672962.1
CDS-3UTR GCA 90 bp ACTAGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGAGCAGCACAGAGAGGCTaGTGTCCAGTGAGTGACCAC +
Preference number: 4 (lower is better)
Translates to: TRRGGFVRLCHSDLCGDRAAQRG*CPVSDH
Trigger: GTGGTCACTCACTGGACAGCAGCCTCTCTGTGCTGC...TCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCTAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR GCA 90 bp AGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACTGCCAGCACATAGAAACTaGGCAGCACAGAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: RRGGFVRLCHSDLCGDRLPAHRN*AAQRGC
Trigger: GCAGCCTCTCTGTGCTGCGCAGTTTCTATGTGCTGG...CAGTCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR GCA 90 bp ACTAGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGAGCAAGCAGGTTGCACTaGAGCACCCCCATGGACAGT +
Preference number: 4 (lower is better)
Translates to: TRRGGFVRLCHSDLCGDRASRLH*STPMDS
Trigger: ACTGTCCATGGGGGTGCTGCAGTGCAACCTGCTTGC...TCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCTAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR GCA 90 bp ACTAGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGAGGCTTTGTGAGGCTTTaGCACAGTGACCTCTGCGGG +
Preference number: 4 (lower is better)
Translates to: TRRGGFVRLCHSDLCGDRGFVRL*HSDLCG
Trigger: CCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCC...TCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCTAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR CCA 90 bp AGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACTGGCTCAGTTGCCCATATaGAAACTCAGCCTCCACGGG +
Preference number: 4 (lower is better)
Translates to: RRGGFVRLCHSDLCGDRLAQLPI*KLSLHG
Trigger: CCCGTGGAGGCTGAGTTTCCATATGGGCAACTGAGC...CAGTCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR TCA 90 bp AGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACTGTTGGTCACCTCCAGATaGGTAGCCTGGTGTCCATTC +
Preference number: 4 (lower is better)
Translates to: RRGGFVRLCHSDLCGDRLLVTSR*VAWCPF
Trigger: GAATGGACACCAGGCTACTCATCTGGAGGTGACCAA...CAGTCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR GCA 90 bp ACTAGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACCAGCACATAGAAACTaGGCAGCACAGAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: TRRGGFVRLCHSDLCGDRPAHRN*AAQRGC
Trigger: GCAGCCTCTCTGTGCTGCGCAGTTTCTATGTGCTGG...TCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCTAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR CCA 90 bp ACTAGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGAACTGCAGCACCCCCATaGACAGTGTCACCATCACGA +
Preference number: 4 (lower is better)
Translates to: TRRGGFVRLCHSDLCGDRTAAPP*TVSPSR
Trigger: TCGTGATGGTGACACTGTCCATGGGGGTGCTGCAGT...TCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCTAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR CCA 90 bp ACTAGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGATCAGGACTGGGTATGTaGACACATCCTCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: TRRGGFVRLCHSDLCGDRSGLGM*THPPAP
Trigger: AGGGGCTGGAGGATGTGTCCACATACCCAGTCCTGA...TCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCTAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR TCA 90 bp ACTAGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGAGTTCAGACCTTCAGCTaGGGTCACAAGCTCGAGTTC +
Preference number: 4 (lower is better)
Translates to: TRRGGFVRLCHSDLCGDRVQTFS*GHKLEF
Trigger: GAACTCGAGCTTGTGACCTCAGCTGAAGGTCTGAAC...TCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCTAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR TCA 90 bp AGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACTGAGCTTGTCAATCCGCTaGCGTTGGTGTACATGTGGT +
Preference number: 4 (lower is better)
Translates to: RRGGFVRLCHSDLCGDRLSLSIR*RWCTCG
Trigger: ACCACATGTACACCAACGTCAGCGGATTGACAAGCT...CAGTCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR GCA 90 bp AGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACTGCAGGATGTGCTCAGTTaGCCATATGGAAACTCAGCC +
Preference number: 4 (lower is better)
Translates to: RRGGFVRLCHSDLCGDRLQDVLS*PYGNSA
Trigger: GGCTGAGTTTCCATATGGGCAACTGAGCACATCCTG...CAGTCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR GCA 90 bp ACTAGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGAGGGAGTGGCAGGATGTaGTCAGTTGCCCATATGGAA +
Preference number: 4 (lower is better)
Translates to: TRRGGFVRLCHSDLCGDRGSGRM*SVAHME
Trigger: TTCCATATGGGCAACTGAGCACATCCTGCCACTCCC...TCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCTAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR CCA 90 bp ACTAGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGAGGAACTCTCTGCCCATaGTGTACTGCAGGTGAAGGT +
Preference number: 4 (lower is better)
Translates to: TRRGGFVRLCHSDLCGDRGTLCP*CTAGEG
Trigger: ACCTTCACCTGCAGTACACCATGGGCAGAGAGTTCC...TCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCTAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR CCA 90 bp ACTAGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGATGTCACACACAGCTCTaGCAGCTGAGTGGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: TRRGGFVRLCHSDLCGDRCHTQL*QLSGRR
Trigger: TCTTCTCCCACTCAGCTGCCAGAGCTGTGTGTGACA...TCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCTAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR TCA 90 bp AGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACTGTGTACATGTGGTGTCTaGACTTGGTGGAACTCTCTG +
Preference number: 4 (lower is better)
Translates to: RRGGFVRLCHSDLCGDRLCTCGV*TWWNSL
Trigger: CAGAGAGTTCCACCAAGTTCAGACACCACATGTACA...CAGTCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR TCA 90 bp ACTAGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGAAGCTTGTCAATCCGCTaGCGTTGGTGTACATGTGGT +
Preference number: 4 (lower is better)
Translates to: TRRGGFVRLCHSDLCGDRSLSIR*RWCTCG
Trigger: ACCACATGTACACCAACGTCAGCGGATTGACAAGCT...TCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCTAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR GCA 90 bp ACTAGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACAGGATGTGCTCAGTTaGCCATATGGAAACTCAGCC +
Preference number: 4 (lower is better)
Translates to: TRRGGFVRLCHSDLCGDRQDVLS*PYGNSA
Trigger: GGCTGAGTTTCCATATGGGCAACTGAGCACATCCTG...TCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCTAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR TCA 90 bp ACTAGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGATGTACATGTGGTGTCTaGACTTGGTGGAACTCTCTG +
Preference number: 4 (lower is better)
Translates to: TRRGGFVRLCHSDLCGDRCTCGV*TWWNSL
Trigger: CAGAGAGTTCCACCAAGTTCAGACACCACATGTACA...TCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCTAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR GCA 90 bp AGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACTGACAAATCTATCATCATaGCCAGGCGGTTCAACTCCT +
Preference number: 4 (lower is better)
Translates to: RRGGFVRLCHSDLCGDRLTNLSS*PGGSTP
Trigger: AGGAGTTGAACCGCCTGGGCATGATGATAGATTTGT...CAGTCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR CCA 90 bp AGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACTGACGTTGGTGTACATGTaGTGTCTGAACTTGGTGGAA +
Preference number: 4 (lower is better)
Translates to: RRGGFVRLCHSDLCGDRLTLVYM*CLNLVE
Trigger: TTCCACCAAGTTCAGACACCACATGTACACCAACGT...CAGTCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR GCA 90 bp ACTAGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGAACAAATCTATCATCATaGCCAGGCGGTTCAACTCCT +
Preference number: 4 (lower is better)
Translates to: TRRGGFVRLCHSDLCGDRTNLSS*PGGSTP
Trigger: AGGAGTTGAACCGCCTGGGCATGATGATAGATTTGT...TCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCTAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR GCA 90 bp ACTAGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGATTCTTCTTCAGAAGCTaGAGGATATCATCGGGAACA +
Preference number: 4 (lower is better)
Translates to: TRRGGFVRLCHSDLCGDRFFFRS*RISSGT
Trigger: TGTTCCCGATGATATCCTGCAGCTTCTGAAGAAGAA...TCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR GCA 90 bp ACTAGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGATATCAAGGTGTCCGATaGATAGGACAAATCTATCAT +
Preference number: 4 (lower is better)
Translates to: TRRGGFVRLCHSDLCGDRYQGVR*IGQIYH
Trigger: ATGATAGATTTGTCCTATGCATCGGACACCTTGATA...TCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS GCA 90 bp AGATACCGCCGGCTGAGCGCGCGGGAACCCTCGCGGCCCGTGGGCTaGATGTTGCGCGGGGGTCGGCCGCGGGAGCCTGGGAGGAGCAGG +
Preference number: 5 (lower is better)
Translates to: RYRRLSAREPSRPVG*MLRGGRPREPGRSR
Trigger: CCTGCTCCTCCCAGGCTCCCGCGGCCGACCCCCGCGCAACATGCAGCCCACGGGCCGCGAGGGTTCCCGCGCGCTCAGCCGGCGGTATCT
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268793.6
ENST00000574342.1
ENST00000672962.1
CDS CCA 90 bp ATGTTGCGCGGGGGTCGGCCGCGGGAGCCTGGGAGGAGCAGGCGATaGGCAGAGGCCGACAATGGGGTCCGGATCATGACGACCCAGCCT +
Preference number: 5 (lower is better)
Translates to: MLRGGRPREPGRSRR*AEADNGVRIMTTQP
Trigger: AGGCTGGGTCGTCATGATCCGGACCCCATTGTCGGCCTCTGCCCATCGCCTGCTCCTCCCAGGCTCCCGCGGCCGACCCCCGCGCAACAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268793.6
ENST00000574342.1
ENST00000672962.1
CDS TCA 90 bp GGAGGAGCAGGCGATGGGCAGAGGCCGACAATGGGGTCCGGATCATaGCGACCCAGCCTCCCGAAGAGGGGGTTGAAGTCACGCGACTCT +
Preference number: 5 (lower is better)
Translates to: GGAGDGQRPTMGSGS*RPSLPKRGLKSRDS
Trigger: AGAGTCGCGTGACTTCAACCCCCTCTTCGGGAGGCTGGGTCGTCATGATCCGGACCCCATTGTCGGCCTCTGCCCATCGCCTGCTCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268793.6
ENST00000574342.1
ENST00000672962.1
CDS-3UTR CAA 90 bp AGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACTGACCTGGGGCAGGTCATaGTGGCCGTCCACGAGTGGG +
Preference number: 5 (lower is better)
Translates to: RRGGFVRLCHSDLCGDRLTWGRS*WPSTSG
Trigger: CCCACTCGTGGACGGCCACAATGACCTGCCCCAGGT...CAGTCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR CAA 90 bp AGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACTGCGAAGGTCCAGGGTTTaGGGGGTGCCTGGCGTAGTG +
Preference number: 5 (lower is better)
Translates to: RRGGFVRLCHSDLCGDRLRRSRV*GVPGVV
Trigger: CACTACGCCAGGCACCCCCAAAACCCTGGACCTTCG...CAGTCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR CAA 90 bp AGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACTGCTCCAGGGGACCCGATaGGTTGGCTGCTTGGTCACC +
Preference number: 5 (lower is better)
Translates to: RRGGFVRLCHSDLCGDRLLQGTR*VGCLVT
Trigger: GGTGACCAAGCAGCCAACCAATCGGGTCCCCTGGAG...CAGTCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR CAA 90 bp AGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACTGGGTATGGGGAGGCATTaGAGGACCTCCAGGGGACCC +
Preference number: 5 (lower is better)
Translates to: RRGGFVRLCHSDLCGDRLGMGRH*RTSRGP
Trigger: GGGTCCCCTGGAGGTCCTCAAATGCCTCCCCATACC...CAGTCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR CAA 90 bp ACTAGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACGAAGGTCCAGGGTTTaGGGGGTGCCTGGCGTAGTG +
Preference number: 5 (lower is better)
Translates to: TRRGGFVRLCHSDLCGDRRRSRV*GVPGVV
Trigger: CACTACGCCAGGCACCCCCAAAACCCTGGACCTTCG...TCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCTAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR CAA 90 bp ACTAGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGAGGTATGGGGAGGCATTaGAGGACCTCCAGGGGACCC +
Preference number: 5 (lower is better)
Translates to: TRRGGFVRLCHSDLCGDRGMGRH*RTSRGP
Trigger: GGGTCCCCTGGAGGTCCTCAAATGCCTCCCCATACC...TCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCTAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR CAA 90 bp AGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACTGCTCCCGAAGAGGGGGTaGAAGTCACGCGACTCTGAG +
Preference number: 5 (lower is better)
Translates to: RRGGFVRLCHSDLCGDRLLPKRG*KSRDSE
Trigger: CTCAGAGTCGCGTGACTTCAACCCCCTCTTCGGGAG...CAGTCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000672962.1
CDS-3UTR CAA 90 bp AGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACTGACGTTAGCAAGCAGGTaGCACTGCAGCACCCCCATG +
Preference number: 5 (lower is better)
Translates to: RRGGFVRLCHSDLCGDRLTLASR*HCSTPM
Trigger: CATGGGGGTGCTGCAGTGCAACCTGCTTGCTAACGT...CAGTCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR CAA 90 bp ACTAGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGAAGGGGACCCGATTGGTaGGCTGCTTGGTCACCTCCA +
Preference number: 5 (lower is better)
Translates to: TRRGGFVRLCHSDLCGDRRGPDW*AAWSPP
Trigger: TGGAGGTGACCAAGCAGCCAACCAATCGGGTCCCCT...TCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCTAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR CAA 90 bp ACTAGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGAACGTTAGCAAGCAGGTaGCACTGCAGCACCCCCATG +
Preference number: 5 (lower is better)
Translates to: TRRGGFVRLCHSDLCGDRTLASR*HCSTPM
Trigger: CATGGGGGTGCTGCAGTGCAACCTGCTTGCTAACGT...TCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCTAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR CAA 90 bp AGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACTGGTCAATCCGCTGACGTaGGTGTACATGTGGTGTCTG +
Preference number: 5 (lower is better)
Translates to: RRGGFVRLCHSDLCGDRLVNPLT*VYMWCL
Trigger: CAGACACCACATGTACACCAACGTCAGCGGATTGAC...CAGTCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR CAA 90 bp AGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACTGGCAGGATGTGCTCAGTaGCCCATATGGAAACTCAGC +
Preference number: 5 (lower is better)
Translates to: RRGGFVRLCHSDLCGDRLAGCAQ*PIWKLS
Trigger: GCTGAGTTTCCATATGGGCAACTGAGCACATCCTGC...CAGTCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR CAA 90 bp ACTAGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGAGTCAATCCGCTGACGTaGGTGTACATGTGGTGTCTG +
Preference number: 5 (lower is better)
Translates to: TRRGGFVRLCHSDLCGDRVNPLT*VYMWCL
Trigger: CAGACACCACATGTACACCAACGTCAGCGGATTGAC...TCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCTAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR CAA 90 bp AGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGACTGGGAACATTCAACAAATaGTCACACACAGCTCTGGCA +
Preference number: 5 (lower is better)
Translates to: RRGGFVRLCHSDLCGDRLGTFNK*SHTALA
Trigger: TGCCAGAGCTGTGTGTGACAATTTGTTGAATGTTCC...CAGTCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS-3UTR CAA 90 bp ACTAGGAGAGGGGGCTTTGTGAGGCTTTGCCACAGTGACCTCTGCGGGGACCGAGGAACATTCAACAAATaGTCACACACAGCTCTGGCA +
Preference number: 5 (lower is better)
Translates to: TRRGGFVRLCHSDLCGDRGTFNK*SHTALA
Trigger: TGCCAGAGCTGTGTGTGACAATTTGTTGAATGTTCC...TCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCTAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS TCA 90 bp TATTCTCAGCATATGCTTGTGAATGAACTAGGAGAGGGGGCTTTGTaGGGCTTTGCCACAGTGACCTCTGCGGGGACCGACTGTGTCAGC +
Preference number: 5 (lower is better)
Translates to: YSQHMLVNELGEGAL*GFATVTSAGTDCVS
Trigger: GCTGACACAGTCGGTCCCCGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCTAGTTCATTCACAAGCATATGCTGAGAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS CCA 90 bp ACTTTCTCACCAAAGCTTGTCAATCCGCTGACGTTGGTGTACATGTaGTGTCTGAACTTGGTGGAACTCTCTGCCCATGGTGTACTGCAG +
Preference number: 5 (lower is better)
Translates to: TFSPKLVNPLTLVYM*CLNLVELSAHGVLQ
Trigger: CTGCAGTACACCATGGGCAGAGAGTTCCACCAAGTTCAGACACCACATGTACACCAACGTCAGCGGATTGACAAGCTTTGGTGAGAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS GCA 72 bp GGGGCGCCCGGCGTGGTCTCCGCGCGGGTTACGGGCTaGCGCAGCAGCAGCAGCAGTAGCAGGAGCAGCAGA +
Preference number: 6 (lower is better)
Translates to: GAPGVVSARVTG*RSSSSSSRSSR
Trigger: TCTGCTGCTCCTGCTACTGCTGCTGCTGCTGCGGCAGCCCGTAACCCGCGCGGAGACCACGCCGGGCGCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268793.6
ENST00000574342.1
ENST00000672962.1
CDS TCA 72 bp CAGCCTCCCGAAGAGGGGGTTGAAGTCACGCGACTCTaGGACCGACGCGCCACGCAAGGGGGCGCCACGGCT +
Preference number: 6 (lower is better)
Translates to: QPPEEGVEVTRL*DRRATQGGATA
Trigger: AGCCGTGGCGCCCCCTTGCGTGGCGCGTCGGTCTCAGAGTCGCGTGACTTCAACCCCCTCTTCGGGAGGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000672962.1
CDS TCA 72 bp CCGGATCATGACGACCCAGCCTCCCGAAGAGGGGGTTaGAGTCACGCGACTCTGAGACCGACGCGCCACGCA +
Preference number: 6 (lower is better)
Translates to: PDHDDPASRRGG*SHATLRPTRHA
Trigger: TGCGTGGCGCGTCGGTCTCAGAGTCGCGTGACTTCAACCCCCTCTTCGGGAGGCTGGGTCGTCATGATCCGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672962.1
CDS TCA 72 bp GGCGATGGGCAGAGGCCGACAATGGGGTCCGGATCATaGCGACCCAGCCTCCCGAAGAGGGGGTTGAAGTCA +
Preference number: 6 (lower is better)
Translates to: GDGQRPTMGSGS*RPSLPKRGLKS
Trigger: TGACTTCAACCCCCTCTTCGGGAGGCTGGGTCGTCATGATCCGGACCCCATTGTCGGCCTCTGCCCATCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268793.6
ENST00000574342.1
ENST00000672962.1
CDS CCA 72 bp GACCTCTGCGGGGACCGACTGTGTCAGCAGAGCCACTaGGTGAAGGTTGGGATGGTGGCAGCAGCCACAAGG +
Preference number: 6 (lower is better)
Translates to: DLCGDRLCQQSH*VKVGMVAAATR
Trigger: CCTTGTGGCTGCTGCCACCATCCCAACCTTCACCCAGTGGCTCTGCTGACACAGTCGGTCCCCGCAGAGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS TCA 72 bp AGCCACAAGGCCTGGAACAAGGTATGGGGAGGCATTTaGGGACCTCCAGGGGACCCGATTGGTTGGCTGCTT +
Preference number: 6 (lower is better)
Translates to: SHKAWNKVWGGI*GPPGDPIGWLL
Trigger: AAGCAGCCAACCAATCGGGTCCCCTGGAGGTCCTCAAATGCCTCCCCATACCTTGTTCCAGGCCTTGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS CCA 72 bp CCAAAGCTTGTCAATCCGCTGACGTTGGTGTACATGTaGTGTCTGAACTTGGTGGAACTCTCTGCCCATGGT +
Preference number: 6 (lower is better)
Translates to: PKLVNPLTLVYM*CLNLVELSAHG
Trigger: ACCATGGGCAGAGAGTTCCACCAAGTTCAGACACCACATGTACACCAACGTCAGCGGATTGACAAGCTTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS CAA 90 bp AACTCCTCTACTACTTTCTCACCAAAGCTTGTCAATCCGCTGACGTaGGTGTACATGTGGTGTCTGAACTTGGTGGAACTCTCTGCCCAT +
Preference number: 6 (lower is better)
Translates to: NSSTTFSPKLVNPLT*VYMWCLNLVELSAH
Trigger: ATGGGCAGAGAGTTCCACCAAGTTCAGACACCACATGTACACCAACGTCAGCGGATTGACAAGCTTTGGTGAGAAAGTAGTAGAGGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1
CDS CAA 72 bp ACTACTTTCTCACCAAAGCTTGTCAATCCGCTGACGTaGGTGTACATGTGGTGTCTGAACTTGGTGGAACTC +
Preference number: 6 (lower is better)
Translates to: TTFSPKLVNPLT*VYMWCLNLVEL
Trigger: GAGTTCCACCAAGTTCAGACACCACATGTACACCAACGTCAGCGGATTGACAAGCTTTGGTGAGAAAGTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268793.6
ENST00000672962.1