RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DPEP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000015413

Ensembl transcript IDs: ENST00000261615.5, ENST00000393092.7, ENST00000421184.5, ENST00000561484.1, ENST00000564281.5, ENST00000564645.1, ENST00000565249.5, ENST00000568281.5, ENST00000570029.5

Found 325 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCTaGCCCCCAGGTAAGCCCAGGCGTCCTCTCAGGAGATGCTGGTCC +
Preference number: 1 (lower is better)
Translates to: LRAYCVCVLNCPQAS*PPGKPRRPLRRCWS
Trigger: GGACCAGCATCTCCTGAGAGGACGCCTGGGCTTACCTGGGGGGCAGGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
3UTR-3UTR CCA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCAGGGCTCCTGGCATCTaGAGTCCTGGGATGGGCGGG +
Preference number: 2 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASRAPGI*SPGMGG
Trigger: CCCGCCCATCCCAGGACTCCAGATGCCAGGAGCCCT...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
3UTR-3UTR CCA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCGCTGGTCCTTGCATGTaGGCAGCAGGGCTCCTGGCA +
Preference number: 2 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASAGPCM*AAGLLA
Trigger: TGCCAGGAGCCCTGCTGCCCACATGCAAGGACCAGC...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
3UTR-3UTR GCA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCCGTCCTCTCAGGAGATaGTGGTCCTTGCATGTGGGC +
Preference number: 2 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASRPLRR*WSLHVG
Trigger: GCCCACATGCAAGGACCAGCATCTCCTGAGAGGACG...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
3UTR-3UTR CCA 90 bp TGTGAAGGGGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTTCTGGAGTCCTGGGATaGGCGGGTCTTCCCGGAGCT +
Preference number: 2 (lower is better)
Translates to: CEGVLLLLRAYCVCVLNCSGVLG*AGLPGA
Trigger: AGCTCCGGGAAGACCCGCCCATCCCAGGACTCCAGA...ACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACCCCTTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261615.5
3UTR-3UTR CCA 90 bp TGTGAAGGGGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTTGGCATCTGGAGTCCTaGGATGGGCGGGTCTTCCCG +
Preference number: 2 (lower is better)
Translates to: CEGVLLLLRAYCVCVLNCWHLES*DGRVFP
Trigger: CGGGAAGACCCGCCCATCCCAGGACTCCAGATGCCA...ACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACCCCTTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261615.5
3UTR-3UTR CCA 90 bp GGATGTGAAGGGGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACCCTCTCAGGAGATGCTaGTCCTTGCATGTGGGCAGC +
Preference number: 2 (lower is better)
Translates to: GCEGVLLLLRAYCVCVLNPLRRC*SLHVGS
Trigger: GCTGCCCACATGCAAGGACCAGCATCTCCTGAGAGG...GTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACCCCTTCACATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261615.5
3UTR GCA 72 bp TACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCTaGCCCCCAGGTAAGCCCAGGCGTCCTCTCAGGAGA +
Preference number: 3 (lower is better)
Translates to: YCVCVLNCPQAS*PPGKPRRPLRR
Trigger: TCTCCTGAGAGGACGCCTGGGCTTACCTGGGGGGCAGGATGCCTGGGGACAGTTCAGGACACACACACAGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCCGTCGTCAGGCACGTTaGGCCGGCTTGCGCACACGC +
Preference number: 4 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLRRQAR*AGLRTR
Trigger: GCGTGTGCGCAAGCCGGCGCAACGTGCCTGACGACG...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCGCTGGTCCAGCGGGATaGGCTCCTCCTCGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLAGPAG*APPREP
Trigger: AGGCTCCCGAGGAGGAGCCCATCCCGCTGGACCAGC...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCCAGGAGCCACCCAGCTaGTCCAGCGGGATGGGCTCC +
Preference number: 4 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLQEPPS*SSGMGS
Trigger: GGAGCCCATCCCGCTGGACCAGCTGGGTGGCTCCTG...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp AGTCCTGGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTCCCCGGGGACCTGTGTaGACTGCTGCCCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: SPGMGGSSRSSGNPKGDSPRGPV*TAALVP
Trigger: AGGCACCAGGGCAGCAGTGCACACAGGTCCCCGGGG...AGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCCAGGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCGCCTCTGTGCTGGCCTaGCTGGCCCGTGCAGAAGGA +
Preference number: 4 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLASVLA*LARAEG
Trigger: TCCTTCTGCACGGGCCAGCCAGGCCAGCACAGAGGC...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp AGTCCTGGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTCTGGTGCCTCTGTGCTaGCCTGGCTGGCCCGTGCAG +
Preference number: 4 (lower is better)
Translates to: SPGMGGSSRSSGNPKGDSLVPLC*PGWPVQ
Trigger: CTGCACGGGCCAGCCAGGCCAGCACAGAGGCACCAG...AGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCCAGGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCATCCGCTCCACATGGTaGGGTCCCCGGGGACCTGTG +
Preference number: 4 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLIRSTW*GPRGPV
Trigger: CACAGGTCCCCGGGGACCCCACCATGTGGAGCGGAT...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCCCACGCCGATCAGGCTaGCCACCTTCCCTTCCCGGA +
Preference number: 4 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLPRRSG*PPSLPG
Trigger: TCCGGGAAGGGAAGGTGGCCAGCCTGATCGGCGTGG...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp AGTCCTGGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGCTGGTCCAGCGGGATaGGCTCCTCCTCGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: SPGMGGSSRSSGNPKGDSAGPAG*APPREP
Trigger: AGGCTCCCGAGGAGGAGCCCATCCCGCTGGACCAGC...AGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCCAGGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp AGTCCTGGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTCAGGAGCCACCCAGCTaGTCCAGCGGGATGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SPGMGGSSRSSGNPKGDSQEPPS*SSGMGS
Trigger: GGAGCCCATCCCGCTGGACCAGCTGGGTGGCTCCTG...AGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCCAGGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCAGCAGGAGCCCCCAGTaGCGATGGAGGCTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLSRSPQ*RWRLEA
Trigger: GGCTTCCAGCCTCCATCGCCACTGGGGGCTCCTGCT...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCCCTTCCCGGAAGGCCTaGCGAATGCCTGCACTGCTG +
Preference number: 4 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLPSRKA*RMPALL
Trigger: CAGCAGTGCAGGCATTCGGCAGGCCTTCCGGGAAGG...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCGGGGCTCTGGACAGCTaGAGGGTGGCCTTCATGGTG +
Preference number: 4 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLGALDS*RVAFMV
Trigger: CACCATGAAGGCCACCCTGCAGCTGTCCAGAGCCCC...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp AGTCCTGGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTCACGTTGCGCCGGCTTaGGCACACGCTGTAGGCCGA +
Preference number: 4 (lower is better)
Translates to: SPGMGGSSRSSGNPKGDSHVAPA*AHAVGR
Trigger: TCGGCCTACAGCGTGTGCGCAAGCCGGCGCAACGTG...AGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCCAGGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCCTGTGCTGGCCTGGCTaGCCCGTGCAGAAGGATGAG +
Preference number: 4 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLLCWPG*PVQKDE
Trigger: CTCATCCTTCTGCACGGGCCAGCCAGGCCAGCACAG...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCTGTGCACTGCTGCCCTaGTGCCTCTGTGCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLCALLP*CLCAGL
Trigger: CAGGCCAGCACAGAGGCACCAGGGCAGCAGTGCACA...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCCCAAGGTGGTCAGGTTaGCCCTCTCGTCCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLPRWSG*PSRPAA
Trigger: GGCTGCAGGACGAGAGGGCCAACCTGACCACCTTGG...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCGTGTGCCGGCCAAGGTaGTCAGGTTGGCCCTCTCGT +
Preference number: 4 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLVCRPR*SGWPSR
Trigger: ACGAGAGGGCCAACCTGACCACCTTGGCCGGCACAC...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp AGTCCTGGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTCCACGCCGATCAGGCTaGCCACCTTCCCTTCCCGGA +
Preference number: 4 (lower is better)
Translates to: SPGMGGSSRSSGNPKGDSPRRSG*PPSLPG
Trigger: TCCGGGAAGGGAAGGTGGCCAGCCTGATCGGCGTGG...AGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCCAGGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCCTGCTGTCAATGGAGTaGCCGCCCTCCACGCCGATC +
Preference number: 4 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLLLSME*PPSTPI
Trigger: GATCGGCGTGGAGGGCGGCCACTCCATTGACAGCAG...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCGACAAGCCTTGGCTCTaGGGCTCGCTGTCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLDKPWL*GSLSPV
Trigger: CACGGGAGACAGCGAGCCCCAGAGCCAAGGCTTGTC...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp AGTCCTGGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTAGCCCCCAGTGGCGATaGAGGCTGGAAGCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: SPGMGGSSRSSGNPKGDSSPQWR*RLEAPE
Trigger: CTCTGGGGCTTCCAGCCTCCATCGCCACTGGGGGCT...AGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCCAGGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCTCTGGAGTCCTGGGATaGGCGGGTCTTCCCGGAGCT +
Preference number: 4 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLSGVLG*AGLPGA
Trigger: AGCTCCGGGAAGACCCGCCCATCCCAGGACTCCAGA...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp AGTCCTGGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTAGGGCTCCTGGCATCTaGAGTCCTGGGATGGGCGGG +
Preference number: 4 (lower is better)
Translates to: SPGMGGSSRSSGNPKGDSRAPGI*SPGMGG
Trigger: CCCGCCCATCCCAGGACTCCAGATGCCAGGAGCCCT...AGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCCAGGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR TCA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCATGAGCTTCAGGCTGTaGGGAGCCACTCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLMSFRL*GATLPA
Trigger: GGCAGGCAGAGTGGCTCCTCACAGCCTGAAGCTCAT...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261615.5
CDS-3UTR TCA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCGCCCGTGCAGAAGGATaGGCTTCAGGCTGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLARAEG*ASGCEE
Trigger: CTCCTCACAGCCTGAAGCTCATCCTTCTGCACGGGC...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR TCA 90 bp AGTCCTGGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTCAGGGGAGTCCCTCATaGTCCTCTCTGCCTCGTCCC +
Preference number: 4 (lower is better)
Translates to: SPGMGGSSRSSGNPKGDSQGSPS*SSLPRP
Trigger: GGGACGAGGCAGAGAGGATCATGAGGGACTCCCCTG...AGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCCAGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR TCA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCTGTTGCAGCTGTGGGTaGGGGTCAGGTACCGCATGC +
Preference number: 4 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLCCSCG*GSGTAC
Trigger: GCATGCGGTACCTGACCCTCACCCACAGCTGCAACA...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR TCA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCGTGGCCACAGACACGTaGGCCAAGTCGATGAGGACC +
Preference number: 4 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLVATDT*AKSMRT
Trigger: GGTCCTCATCGACTTGGCTCACGTGTCTGTGGCCAC...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR TCA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCCCGTCCAGTTCCTCCTaGGCAGCTCAGCGATCAGGT +
Preference number: 4 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLPSSSS*AAQRSG
Trigger: ACCTGATCGCTGAGCTGCTCAGGAGGAACTGGACGG...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR TCA 90 bp AGTCCTGGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTCCTCGGGAGCCTGTGTaGGGTTGCTGGCCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: SPGMGGSSRSSGNPKGDSPREPV*GCWPVP
Trigger: TGGAACAGGCCAGCAACCTCACACAGGCTCCCGAGG...AGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCCAGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp AGTCCTGGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGCCTGGCTGGCCCGTaGAGAAGGATGAGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SPGMGGSSRSSGNPKGDSGLAGP*RRMSFR
Trigger: CCTGAAGCTCATCCTTCTGCACGGGCCAGCCAGGCC...AGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCCAGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCGCAGGACGCCCAAACTaGTGTCAATGGAGTGGCCGC +
Preference number: 4 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLAGRPN*CQWSGR
Trigger: GCGGCCACTCCATTGACAGCAGTTTGGGCGTCCTGC...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCGCCCAGCTGATAGAGTaGCCGCAGGACGCCCAAACT +
Preference number: 4 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLAQLIE*PQDAQT
Trigger: AGTTTGGGCGTCCTGCGGGCACTCTATCAGCTGGGC...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp AGTCCTGGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTCAGGTTGTCAGCCAGTaGGCCCTTGACCTCCGCCTC +
Preference number: 4 (lower is better)
Translates to: SPGMGGSSRSSGNPKGDSQVVSQ*ALDLRL
Trigger: GAGGCGGAGGTCAAGGGCGCACTGGCTGACAACCTG...AGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCCAGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp AGTCCTGGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTCTGTGCTGGCCTGGCTaGCCCGTGCAGAAGGATGAG +
Preference number: 4 (lower is better)
Translates to: SPGMGGSSRSSGNPKGDSLCWPG*PVQKDE
Trigger: CTCATCCTTCTGCACGGGCCAGCCAGGCCAGCACAG...AGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCCAGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp AGTCCTGGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTTGTGCACTGCTGCCCTaGTGCCTCTGTGCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: SPGMGGSSRSSGNPKGDSCALLP*CLCAGL
Trigger: CAGGCCAGCACAGAGGCACCAGGGCAGCAGTGCACA...AGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCCAGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCATCCGGCACATGCGGTaGACCACGTCCATCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLIRHMR*TTSICS
Trigger: GGAGCAGATGGACGTGGTCCACCGCATGTGCCGGAT...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp AGTCCTGGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGACAAGCCTTGGCTCTaGGGCTCGCTGTCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: SPGMGGSSRSSGNPKGDSDKPWL*GSLSPV
Trigger: CACGGGAGACAGCGAGCCCCAGAGCCAAGGCTTGTC...AGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCCAGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCGCAGGGTGGCCTTCATaGTGGCCACAGACACGTGAG +
Preference number: 4 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLAGWPS*WPQTRE
Trigger: CTCACGTGTCTGTGGCCACCATGAAGGCCACCCTGC...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCTGGACAGCTGCAGGGTaGCCTTCATGGTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLWTAAG*PSWWPQ
Trigger: CTGTGGCCACCATGAAGGCCACCCTGCAGCTGTCCA...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp AGTCCTGGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTTGGCATCTGGAGTCCTaGGATGGGCGGGTCTTCCCG +
Preference number: 4 (lower is better)
Translates to: SPGMGGSSRSSGNPKGDSWHLES*DGRVFP
Trigger: CGGGAAGACCCGCCCATCCCAGGACTCCAGATGCCA...AGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCCAGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp AGTCCTGGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGCTGGTCCTTGCATGTaGGCAGCAGGGCTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: SPGMGGSSRSSGNPKGDSAGPCM*AAGLLA
Trigger: TGCCAGGAGCCCTGCTGCCCACATGCAAGGACCAGC...AGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCCAGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR TCA 90 bp AGTCCTGGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGCCCGTGCAGAAGGATaGGCTTCAGGCTGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: SPGMGGSSRSSGNPKGDSARAEG*ASGCEE
Trigger: CTCCTCACAGCCTGAAGCTCATCCTTCTGCACGGGC...AGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCCAGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR TCA 90 bp AGTCCTGGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTTGTTGCAGCTGTGGGTaGGGGTCAGGTACCGCATGC +
Preference number: 4 (lower is better)
Translates to: SPGMGGSSRSSGNPKGDSCCSCG*GSGTAC
Trigger: GCATGCGGTACCTGACCCTCACCCACAGCTGCAACA...AGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCCAGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR TCA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCGCCACCTCCTTGATGTaGTCCAGATGGTCGGCCACT +
Preference number: 4 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLATSLM*SRWSAT
Trigger: AGTGGCCGACCATCTGGATCACATCAAGGAGGTGGC...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR TCA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCCTCCTGCCACCTCCTTaGTGTGATCCAGATGGTCGG +
Preference number: 4 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLLLPPP*CDPDGR
Trigger: CCGACCATCTGGATCACATCAAGGAGGTGGCAGGAG...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR TCA 90 bp AGTCCTGGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTCCGTCCAGTTCCTCCTaGGCAGCTCAGCGATCAGGT +
Preference number: 4 (lower is better)
Translates to: SPGMGGSSRSSGNPKGDSPSSSS*AAQRSG
Trigger: ACCTGATCGCTGAGCTGCTCAGGAGGAACTGGACGG...AGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCCAGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCGAAAGAAGTCTGCAGTaGAGACGGCCACAAGGGGCC +
Preference number: 4 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLERSLQ*RRPQGA
Trigger: GGCCCCTTGTGGCCGTCTGCACTGCAGACTTCTTTC...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCGGATGTTGGTGTGTGTaGCGGCCAAGGTGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLGCWCV*RPRWSG
Trigger: ACCTGACCACCTTGGCCGGCACACACACCAACATCC...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCGGTACATCCGGCACATaGGGTGGACCACGTCCATCT +
Preference number: 4 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLGTSGT*GGPRPS
Trigger: AGATGGACGTGGTCCACCGCATGTGCCGGATGTACC...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp AGTCCTGGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGGTCAGGTACCGCATaGCCAGCTGATAGAGTGCCC +
Preference number: 4 (lower is better)
Translates to: SPGMGGSSRSSGNPKGDSGSGTA*PADRVP
Trigger: GGGCACTCTATCAGCTGGGCATGCGGTACCTGACCC...AGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCCAGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCCACGGCTCTGGCTCCTaGCACCTCCTTGATGTGATC +
Preference number: 4 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLHGSGS*HLLDVI
Trigger: GATCACATCAAGGAGGTGGCAGGAGCCAGAGCCGTG...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp AGTCCTGGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTAGCCGTAATGGGTCCTaGAGGAGCCACCCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: SPGMGGSSRSSGNPKGDSSRNGS*RSHPAG
Trigger: ACCAGCTGGGTGGCTCCTGCAGGACCCATTACGGCT...AGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCCAGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCTCAGCTTGGGGATGTTaGTGTGTGTGCCGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLSAWGC*CVCRPR
Trigger: CCTTGGCCGGCACACACACCAACATCCCCAAGCTGA...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp AGTCCTGGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTTACACGGACCAGAACTaGCCTCCCACAAAGCCGGCC +
Preference number: 4 (lower is better)
Translates to: SPGMGGSSRSSGNPKGDSYTDQN*PPTKPA
Trigger: GGCCGGCTTTGTGGGAGGCCAGTTCTGGTCCGTGTA...AGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCCAGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCACGGCGTCTTTGTTCTaGGTGTCGCAGGGCGTGTAC +
Preference number: 4 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLTASLF*VSQGVY
Trigger: GTACACGCCCTGCGACACCCAGAACAAAGACGCCGT...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCAAGGGTGACAAGCCTTaGCTCTGGGGCTCGCTGTCT +
Preference number: 4 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLKGDKP*LWGSLS
Trigger: AGACAGCGAGCCCCAGAGCCAAGGCTTGTCACCCTT...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp AGTCCTGGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGGTGGCCTTCATGGTaGCCACAGACACGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: SPGMGGSSRSSGNPKGDSGWPSW*PQTREP
Trigger: TGGCTCACGTGTCTGTGGCCACCATGAAGGCCACCC...AGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCCAGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp AGTCCTGGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGCAGGGTGGCCTTCATaGTGGCCACAGACACGTGAG +
Preference number: 4 (lower is better)
Translates to: SPGMGGSSRSSGNPKGDSAGWPS*WPQTRE
Trigger: CTCACGTGTCTGTGGCCACCATGAAGGCCACCCTGC...AGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCCAGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCCCCCTCAGGGACCCTTaGAACACCATCAAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLPLRDP*NTIKVP
Trigger: GGGGACTTTGATGGTGTTCCAAGGGTCCCTGAGGGG...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCCCTCTCAGGAGATGCTaGTCCTTGCATGTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLPLRRC*SLHVGS
Trigger: GCTGCCCACATGCAAGGACCAGCATCTCCTGAGAGG...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCGTCCCGAAAGAAGTCTaGAGTGCAGACGGCCACAAG +
Preference number: 4 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLVPKEV*SADGHK
Trigger: CTTGTGGCCGTCTGCACTGCAGACTTCTTTCGGGAC...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp AGTCCTGGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGATGTTGGTGTGTGTaGCGGCCAAGGTGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: SPGMGGSSRSSGNPKGDSGCWCV*RPRWSG
Trigger: ACCTGACCACCTTGGCCGGCACACACACCAACATCC...AGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCCAGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp AGTCCTGGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTCGTCCTCTCAGGAGATaGTGGTCCTTGCATGTGGGC +
Preference number: 4 (lower is better)
Translates to: SPGMGGSSRSSGNPKGDSRPLRR*WSLHVG
Trigger: GCCCACATGCAAGGACCAGCATCTCCTGAGAGGACG...AGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCCAGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp AGTCCTGGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTTCAGCTTGGGGATGTTaGTGTGTGTGCCGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: SPGMGGSSRSSGNPKGDSSAWGC*CVCRPR
Trigger: CCTTGGCCGGCACACACACCAACATCCCCAAGCTGA...AGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCCAGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp AGTCCTGGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTCCCCTCAGGGACCCTTaGAACACCATCAAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: SPGMGGSSRSSGNPKGDSPLRDP*NTIKVP
Trigger: GGGGACTTTGATGGTGTTCCAAGGGTCCCTGAGGGG...AGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCCAGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp AGTCCTGGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTCCTCTCAGGAGATGCTaGTCCTTGCATGTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: SPGMGGSSRSSGNPKGDSPLRRC*SLHVGS
Trigger: GCTGCCCACATGCAAGGACCAGCATCTCCTGAGAGG...AGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCCAGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR TCA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCCAGCCAGTGCGCCCTTaGCCTCCGCCTCCGTCCAGT +
Preference number: 4 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGQPVRP*PPPPSS
Trigger: ACTGGACGGAGGCGGAGGTCAAGGGCGCACTGGCTG...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR TCA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCTTCCTGAGAGTGCCCTaGGATGTCCTGGCAGTGTTT +
Preference number: 4 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLFLRVP*DVLAVF
Trigger: AAACACTGCCAGGACATCTCAGGGCACTCTCAGGAA...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421184.5
CDS-3UTR GCA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCCCTCATGATCCTCTCTaGCTCGTCCCGAAAGAAGTC +
Preference number: 4 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLPHDPL*LVPKEV
Trigger: GACTTCTTTCGGGACGAGGCAGAGAGGATCATGAGG...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCAACATATCCAGCAGCTaGCAGGGGAGGTCATTGTGC +
Preference number: 4 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLNISSS*QGRSLC
Trigger: GCACAATGACCTCCCCTGGCAGCTGCTGGATATGTT...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCTTGGCCCTCTCGTCCTaGAGCCGGTTGTTGAACATA +
Preference number: 4 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLLALSS*SRLLNI
Trigger: TATGTTCAACAACCGGCTGCAGGACGAGAGGGCCAA...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp AGTCCTGGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTTCCTTCACCACACGCTaGCCAAAGGGTGACAAGCCT +
Preference number: 4 (lower is better)
Translates to: SPGMGGSSRSSGNPKGDSSFTTR*PKGDKP
Trigger: AGGCTTGTCACCCTTTGGGCAGCGTGTGGTGAAGGA...AGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCCAGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCCTGGTGCCTCTGTGCTaGCCTGGCTGGCCCGTGCAG +
Preference number: 4 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGLVPLC*PGWPVQ
Trigger: CTGCACGGGCCAGCCAGGCCAGCACAGAGGCACCAG...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp AGTCCTGGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTAGATGGTCGGCCACTTaGGACAGGTTGGCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: SPGMGGSSRSSGNPKGDSRWSAT*DRLALL
Trigger: CAACAAGGCCAACCTGTCCCAAGTGGCCGACCATCT...AGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCCAGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp AGTCCTGGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTTCAGGTCTGGATACTTaGAGACGTCCTCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: SPGMGGSSRSSGNPKGDSSGLDT*RRPPAP
Trigger: AGGGGCTGGAGGACGTCTCCAAGTATCCAGACCTGA...AGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCCAGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCCTCAGCGATCAGGTCTaGATACTTGGAGACGTCCTC +
Preference number: 4 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLLSDQV*ILGDVL
Trigger: GAGGACGTCTCCAAGTATCCAGACCTGATCGCTGAG...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR TCA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCCAGCCAGTGCGCCCTTaGCCTCCGCCTCCGTCCAGT +
Preference number: 4 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASQPVRP*PPPPSS
Trigger: ACTGGACGGAGGCGGAGGTCAAGGGCGCACTGGCTG...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCGCACTGCTGCCCTGGTaGCTCTGTGCTGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGALLPW*LCAGLA
Trigger: AGCCAGGCCAGCACAGAGGCACCAGGGCAGCAGTGC...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp AGTCCTGGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTTTGGCCCTCTCGTCCTaGAGCCGGTTGTTGAACATA +
Preference number: 4 (lower is better)
Translates to: SPGMGGSSRSSGNPKGDSLALSS*SRLLNI
Trigger: TATGTTCAACAACCGGCTGCAGGACGAGAGGGCCAA...AGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCCAGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCCACGTTGCGCCGGCTTaGGCACACGCTGTAGGCCGA +
Preference number: 4 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGHVAPA*AHAVGR
Trigger: TCGGCCTACAGCGTGTGCGCAAGCCGGCGCAACGTG...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCCGTCGTCAGGCACGTTaGGCCGGCTTGCGCACACGC +
Preference number: 4 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASRRQAR*AGLRTR
Trigger: GCGTGTGCGCAAGCCGGCGCAACGTGCCTGACGACG...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCGGGTGTTGCTTTTATTaGGGGCCTACTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLGCCFY*GPTVCV
Trigger: CACACACACAGTAGGCCCGCAATAAAAGCAACACCC...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCGGAGCCACTCTGCCATaGGCGGGACAGGGTCCCGAG +
Preference number: 4 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASGATLP*AGQGPE
Trigger: CTCGGGACCCTGTCCCGCGCATGGCAGAGTGGCTCC...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393092.7
CDS-3UTR CCA 90 bp CCAGGATGTGAAGGGGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGCTGGTGCCTCTGTGCTaGCCTGGCTGGCCCGTGCAG +
Preference number: 4 (lower is better)
Translates to: PGCEGVLLLLRAYCVCVLLVPLC*PGWPVQ
Trigger: CTGCACGGGCCAGCCAGGCCAGCACAGAGGCACCAG...CAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACCCCTTCACATCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261615.5
CDS-3UTR CCA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCGCTCCACATGGTaGGGTCCCCGGGGACCTGTG +
Preference number: 4 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGIRSTW*GPRGPV
Trigger: CACAGGTCCCCGGGGACCCCACCATGTGGAGCGGAT...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCCCACGCCGATCAGGCTaGCCACCTTCCCTTCCCGGA +
Preference number: 4 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGPRRSG*PPSLPG
Trigger: TCCGGGAAGGGAAGGTGGCCAGCCTGATCGGCGTGG...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp CCAGGATGTGAAGGGGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGGCTGGTCCAGCGGGATaGGCTCCTCCTCGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: PGCEGVLLLLRAYCVCVLAGPAG*APPREP
Trigger: AGGCTCCCGAGGAGGAGCCCATCCCGCTGGACCAGC...CAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACCCCTTCACATCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261615.5
CDS-3UTR CCA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCAGGGCTCCTGGCATCTaGAGTCCTGGGATGGGCGGG +
Preference number: 4 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGRAPGI*SPGMGG
Trigger: CCCGCCCATCCCAGGACTCCAGATGCCAGGAGCCCT...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR TCA 90 bp GGATGTGAAGGGGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACCAGCCAGTGCGCCCTTaGCCTCCGCCTCCGTCCAGT +
Preference number: 4 (lower is better)
Translates to: GCEGVLLLLRAYCVCVLNQPVRP*PPPPSS
Trigger: ACTGGACGGAGGCGGAGGTCAAGGGCGCACTGGCTG...GTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACCCCTTCACATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261615.5
CDS-3UTR TCA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCCCTCGGGAGCCTGTGTaGGGTTGCTGGCCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGPREPV*GCWPVP
Trigger: TGGAACAGGCCAGCAACCTCACACAGGCTCCCGAGG...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCGGCCTGGCTGGCCCGTaGAGAAGGATGAGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGGLAGP*RRMSFR
Trigger: CCTGAAGCTCATCCTTCTGCACGGGCCAGCCAGGCC...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCGCACTGCTGCCCTGGTaGCTCTGTGCTGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASALLPW*LCAGLA
Trigger: AGCCAGGCCAGCACAGAGGCACCAGGGCAGCAGTGC...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp GGATGTGAAGGGGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACCCCCGGGGACCTGTGTaGACTGCTGCCCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: GCEGVLLLLRAYCVCVLNPRGPV*TAALVP
Trigger: AGGCACCAGGGCAGCAGTGCACACAGGTCCCCGGGG...GTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACCCCTTCACATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000261615.5
CDS-3UTR GCA 90 bp AGTCCTGGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGGTGTTGCTTTTATTaGGGGCCTACTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: SPGMGGSSRSSGNPKGDSGCCFY*GPTVCV
Trigger: CACACACACAGTAGGCCCGCAATAAAAGCAACACCC...AGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCCAGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCCTGTGCTGGCCTGGCTaGCCCGTGCAGAAGGATGAG +
Preference number: 4 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGLCWPG*PVQKDE
Trigger: CTCATCCTTCTGCACGGGCCAGCCAGGCCAGCACAG...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCATCCGCTCCACATGGTaGGGTCCCCGGGGACCTGTG +
Preference number: 4 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASIRSTW*GPRGPV
Trigger: CACAGGTCCCCGGGGACCCCACCATGTGGAGCGGAT...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCGTGTGCCGGCCAAGGTaGTCAGGTTGGCCCTCTCGT +
Preference number: 4 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGVCRPR*SGWPSR
Trigger: ACGAGAGGGCCAACCTGACCACCTTGGCCGGCACAC...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCCTGCTGTCAATGGAGTaGCCGCCCTCCACGCCGATC +
Preference number: 4 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGLLSME*PPSTPI
Trigger: GATCGGCGTGGAGGGCGGCCACTCCATTGACAGCAG...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCGGCGTGTTGCAGCTGTaGGTGAGGGTCAGGTACCGC +
Preference number: 4 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGGVLQL*VRVRYR
Trigger: GCGGTACCTGACCCTCACCCACAGCTGCAACACGCC...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp CCAGGATGTGAAGGGGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAGCCCCCAGTGGCGATaGAGGCTGGAAGCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: PGCEGVLLLLRAYCVCVLSPQWR*RLEAPE
Trigger: CTCTGGGGCTTCCAGCCTCCATCGCCACTGGGGGCT...CAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACCCCTTCACATCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000261615.5
CDS-3UTR CCA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCTCTGGAGTCCTGGGATaGGCGGGTCTTCCCGGAGCT +
Preference number: 4 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGSGVLG*AGLPGA
Trigger: AGCTCCGGGAAGACCCGCCCATCCCAGGACTCCAGA...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR TCA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCCAGGGGAGTCCCTCATaGTCCTCTCTGCCTCGTCCC +
Preference number: 4 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASQGSPS*SSLPRP
Trigger: GGGACGAGGCAGAGAGGATCATGAGGGACTCCCCTG...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR TCA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCCCGTCCAGTTCCTCCTaGGCAGCTCAGCGATCAGGT +
Preference number: 4 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGPSSSS*AAQRSG
Trigger: ACCTGATCGCTGAGCTGCTCAGGAGGAACTGGACGG...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR TCA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCCCTCGGGAGCCTGTGTaGGGTTGCTGGCCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASPREPV*GCWPVP
Trigger: TGGAACAGGCCAGCAACCTCACACAGGCTCCCGAGG...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR TCA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCGAACAGCCACCTCCTTaGGGGCTCGCACAGTACCCC +
Preference number: 4 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASEQPPP*GLAQYP
Trigger: GGGGTACTGTGCGAGCCCTCAAGGAGGTGGCTGTTC...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393092.7
CDS-3UTR GCA 90 bp CCAGGATGTGAAGGGGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGTGGACCACGTCCATCTaGTCCAGCGTCCTCCGCACG +
Preference number: 4 (lower is better)
Translates to: PGCEGVLLLLRAYCVCVLWTTSI*SSVLRT
Trigger: CGTGCGGAGGACGCTGGAGCAGATGGACGTGGTCCA...CAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACCCCTTCACATCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261615.5
CDS-3UTR GCA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCTGGACCACGTCCATCTaGTCCAGCGTCCTCCGCACG +
Preference number: 4 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASWTTSI*SSVLRT
Trigger: CGTGCGGAGGACGCTGGAGCAGATGGACGTGGTCCA...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp CCAGGATGTGAAGGGGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGCCTTCCCGGAAGGCCTaGCGAATGCCTGCACTGCTG +
Preference number: 4 (lower is better)
Translates to: PGCEGVLLLLRAYCVCVLPSRKA*RMPALL
Trigger: CAGCAGTGCAGGCATTCGGCAGGCCTTCCGGGAAGG...CAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACCCCTTCACATCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261615.5
CDS-3UTR GCA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCCCTTCCCGGAAGGCCTaGCGAATGCCTGCACTGCTG +
Preference number: 4 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASPSRKA*RMPALL
Trigger: CAGCAGTGCAGGCATTCGGCAGGCCTTCCGGGAAGG...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCGGGTCAGGTACCGCATaGCCAGCTGATAGAGTGCCC +
Preference number: 4 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGGSGTA*PADRVP
Trigger: GGGCACTCTATCAGCTGGGCATGCGGTACCTGACCC...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCGGGGCTCTGGACAGCTaGAGGGTGGCCTTCATGGTG +
Preference number: 4 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASGALDS*RVAFMV
Trigger: CACCATGAAGGCCACCCTGCAGCTGTCCAGAGCCCC...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCCAGGTTGTCAGCCAGTaGGCCCTTGACCTCCGCCTC +
Preference number: 4 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASQVVSQ*ALDLRL
Trigger: GAGGCGGAGGTCAAGGGCGCACTGGCTGACAACCTG...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCTGTGAGGAGCCACTCTaGCATGCGCGGGACAGGGTC +
Preference number: 4 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASCEEPL*HARDRV
Trigger: GACCCTGTCCCGCGCATGGCAGAGTGGCTCCTCACA...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393092.7
CDS-3UTR CCA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCCCAAGGTGGTCAGGTTaGCCCTCTCGTCCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASPRWSG*PSRPAA
Trigger: GGCTGCAGGACGAGAGGGCCAACCTGACCACCTTGG...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCGGCACATGCGGTaGACCACGTCCATCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGIRHMR*TTSICS
Trigger: GGAGCAGATGGACGTGGTCCACCGCATGTGCCGGAT...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCCCAAACTGCTGTCAATaGAGTGGCCGCCCTCCACGC +
Preference number: 4 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGPNCCQ*SGRPPR
Trigger: GCGTGGAGGGCGGCCACTCCATTGACAGCAGTTTGG...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp CCAGGATGTGAAGGGGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGGGCGTGTTGCAGCTGTaGGTGAGGGTCAGGTACCGC +
Preference number: 4 (lower is better)
Translates to: PGCEGVLLLLRAYCVCVLGVLQL*VRVRYR
Trigger: GCGGTACCTGACCCTCACCCACAGCTGCAACACGCC...CAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACCCCTTCACATCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261615.5
CDS-3UTR CCA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCGGCGTGTTGCAGCTGTaGGTGAGGGTCAGGTACCGC +
Preference number: 4 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASGVLQL*VRVRYR
Trigger: GCGGTACCTGACCCTCACCCACAGCTGCAACACGCC...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCGGGTGGCCTTCATGGTaGCCACAGACACGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGGWPSW*PQTREP
Trigger: TGGCTCACGTGTCTGTGGCCACCATGAAGGCCACCC...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCGCAGGGTGGCCTTCATaGTGGCCACAGACACGTGAG +
Preference number: 4 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGAGWPS*WPQTRE
Trigger: CTCACGTGTCTGTGGCCACCATGAAGGCCACCCTGC...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCTGGACAGCTGCAGGGTaGCCTTCATGGTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGWTAAG*PSWWPQ
Trigger: CTGTGGCCACCATGAAGGCCACCCTGCAGCTGTCCA...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp TGTGAAGGGGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCAGGAGCCACCCAGCTaGTCCAGCGGGATGGGCTCC +
Preference number: 4 (lower is better)
Translates to: CEGVLLLLRAYCVCVLNCQEPPS*SSGMGS
Trigger: GGAGCCCATCCCGCTGGACCAGCTGGGTGGCTCCTG...ACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACCCCTTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261615.5
CDS-3UTR CCA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCAGTGGCGATGGAGGCTaGAAGCCCCAGAGGAGTAGC +
Preference number: 4 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGSGDGG*KPQRSS
Trigger: GCTACTCCTCTGGGGCTTCCAGCCTCCATCGCCACT...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp GGATGTGAAGGGGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACAGCAGGAGCCCCCAGTaGCGATGGAGGCTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: GCEGVLLLLRAYCVCVLNSRSPQ*RWRLEA
Trigger: GGCTTCCAGCCTCCATCGCCACTGGGGGCTCCTGCT...GTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACCCCTTCACATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261615.5
CDS-3UTR CCA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCTGGCATCTGGAGTCCTaGGATGGGCGGGTCTTCCCG +
Preference number: 4 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASWHLES*DGRVFP
Trigger: CGGGAAGACCCGCCCATCCCAGGACTCCAGATGCCA...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp GGATGTGAAGGGGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACAGGGCTCCTGGCATCTaGAGTCCTGGGATGGGCGGG +
Preference number: 4 (lower is better)
Translates to: GCEGVLLLLRAYCVCVLNRAPGI*SPGMGG
Trigger: CCCGCCCATCCCAGGACTCCAGATGCCAGGAGCCCT...GTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACCCCTTCACATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261615.5
CDS-3UTR TCA 90 bp CCAGGATGTGAAGGGGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGCGTGAGCCAAGTCGATaGGGACCCCCAGACGGTTCA +
Preference number: 4 (lower is better)
Translates to: PGCEGVLLLLRAYCVCVLREPSR*GPPDGS
Trigger: TGAACCGTCTGGGGGTCCTCATCGACTTGGCTCACG...CAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACCCCTTCACATCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261615.5
CDS-3UTR TCA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCCGTGAGCCAAGTCGATaGGGACCCCCAGACGGTTCA +
Preference number: 4 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASREPSR*GPPDGS
Trigger: TGAACCGTCTGGGGGTCCTCATCGACTTGGCTCACG...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR TCA 90 bp CCAGGATGTGAAGGGGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGGTGGCCACAGACACGTaGGCCAAGTCGATGAGGACC +
Preference number: 4 (lower is better)
Translates to: PGCEGVLLLLRAYCVCVLVATDT*AKSMRT
Trigger: GGTCCTCATCGACTTGGCTCACGTGTCTGTGGCCAC...CAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACCCCTTCACATCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261615.5
CDS-3UTR TCA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCGTGGCCACAGACACGTaGGCCAAGTCGATGAGGACC +
Preference number: 4 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASVATDT*AKSMRT
Trigger: GGTCCTCATCGACTTGGCTCACGTGTCTGTGGCCAC...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR TCA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCATGAGCTTCAGGCTGTaGGGAGCCACTCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASMSFRL*GATLPP
Trigger: GGGAGGCAGAGTGGCTCCTCACAGCCTGAAGCTCAT...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421184.5
CDS-3UTR GCA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCGGCCTGCCGAATGCCTaGACTGCTGGTGACATACAG +
Preference number: 4 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGGLPNA*TAGDIQ
Trigger: CTGTATGTCACCAGCAGTGCAGGCATTCGGCAGGCC...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp CCAGGATGTGAAGGGGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGGCAGGACGCCCAAACTaGTGTCAATGGAGTGGCCGC +
Preference number: 4 (lower is better)
Translates to: PGCEGVLLLLRAYCVCVLAGRPN*CQWSGR
Trigger: GCGGCCACTCCATTGACAGCAGTTTGGGCGTCCTGC...CAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACCCCTTCACATCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261615.5
CDS-3UTR GCA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCGCAGGACGCCCAAACTaGTGTCAATGGAGTGGCCGC +
Preference number: 4 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASAGRPN*CQWSGR
Trigger: GCGGCCACTCCATTGACAGCAGTTTGGGCGTCCTGC...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCGGGTCAGGTACCGCATaGCCAGCTGATAGAGTGCCC +
Preference number: 4 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASGSGTA*PADRVP
Trigger: GGGCACTCTATCAGCTGGGCATGCGGTACCTGACCC...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp TGTGAAGGGGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCACGTTGCGCCGGCTTaGGCACACGCTGTAGGCCGA +
Preference number: 4 (lower is better)
Translates to: CEGVLLLLRAYCVCVLNCHVAPA*AHAVGR
Trigger: TCGGCCTACAGCGTGTGCGCAAGCCGGCGCAACGTG...ACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACCCCTTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261615.5
CDS-3UTR GCA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCGGTTGGCCTTGTTGGTaGAGGAAATGTAATTGTTGT +
Preference number: 4 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLGWPCW*RKCNCC
Trigger: ACAACAATTACATTTCCTGCACCAACAAGGCCAACC...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCAGCCGTAATGGGTCCTaGAGGAGCCACCCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASSRNGS*RSHPAG
Trigger: ACCAGCTGGGTGGCTCCTGCAGGACCCATTACGGCT...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCCGTCCTCTCAGGAGATaGTGGTCCTTGCATGTGGGC +
Preference number: 4 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGRPLRR*WSLHVG
Trigger: GCCCACATGCAAGGACCAGCATCTCCTGAGAGGACG...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp TGTGAAGGGGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTGCCTCTGTGCTGGCCTaGCTGGCCCGTGCAGAAGGA +
Preference number: 4 (lower is better)
Translates to: CEGVLLLLRAYCVCVLNCASVLA*LARAEG
Trigger: TCCTTCTGCACGGGCCAGCCAGGCCAGCACAGAGGC...ACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACCCCTTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261615.5
CDS-3UTR CCA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCTACACGGACCAGAACTaGCCTCCCACAAAGCCGGCC +
Preference number: 4 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASYTDQN*PPTKPA
Trigger: GGCCGGCTTTGTGGGAGGCCAGTTCTGGTCCGTGTA...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCCCAAACTGCTGTCAATaGAGTGGCCGCCCTCCACGC +
Preference number: 4 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASPNCCQ*SGRPPR
Trigger: GCGTGGAGGGCGGCCACTCCATTGACAGCAGTTTGG...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCAAGGGTGACAAGCCTTaGCTCTGGGGCTCGCTGTCT +
Preference number: 4 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGKGDKP*LWGSLS
Trigger: AGACAGCGAGCCCCAGAGCCAAGGCTTGTCACCCTT...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCAGTGGCGATGGAGGCTaGAAGCCCCAGAGGAGTAGC +
Preference number: 4 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASSGDGG*KPQRSS
Trigger: GCTACTCCTCTGGGGCTTCCAGCCTCCATCGCCACT...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR TCA 90 bp GGATGTGAAGGGGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTTGCAGCTGTGGGTaGGGGTCAGGTACCGCATGC +
Preference number: 4 (lower is better)
Translates to: GCEGVLLLLRAYCVCVLNCCSCG*GSGTAC
Trigger: GCATGCGGTACCTGACCCTCACCCACAGCTGCAACA...GTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACCCCTTCACATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261615.5
CDS-3UTR TCA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCGCCACCTCCTTGATGTaGTCCAGATGGTCGGCCACT +
Preference number: 4 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASATSLM*SRWSAT
Trigger: AGTGGCCGACCATCTGGATCACATCAAGGAGGTGGC...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR TCA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCCTCCTGCCACCTCCTTaGTGTGATCCAGATGGTCGG +
Preference number: 4 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASLLPPP*CDPDGR
Trigger: CCGACCATCTGGATCACATCAAGGAGGTGGCAGGAG...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR TCA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCATGAGCTTCAGGCTGTaGGGAGCCACTCTGCCATGC +
Preference number: 4 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASMSFRL*GATLPC
Trigger: GCATGGCAGAGTGGCTCCTCACAGCCTGAAGCTCAT...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393092.7
CDS-3UTR GCA 90 bp TGTGAAGGGGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTGGCCTGGCTGGCCCGTaGAGAAGGATGAGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: CEGVLLLLRAYCVCVLNCGLAGP*RRMSFR
Trigger: CCTGAAGCTCATCCTTCTGCACGGGCCAGCCAGGCC...ACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACCCCTTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261615.5
CDS-3UTR GCA 90 bp CCAGGATGTGAAGGGGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGGAAAGAAGTCTGCAGTaGAGACGGCCACAAGGGGCC +
Preference number: 4 (lower is better)
Translates to: PGCEGVLLLLRAYCVCVLERSLQ*RRPQGA
Trigger: GGCCCCTTGTGGCCGTCTGCACTGCAGACTTCTTTC...CAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACCCCTTCACATCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261615.5
CDS-3UTR GCA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCGAAAGAAGTCTGCAGTaGAGACGGCCACAAGGGGCC +
Preference number: 4 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASERSLQ*RRPQGA
Trigger: GGCCCCTTGTGGCCGTCTGCACTGCAGACTTCTTTC...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCGTCCCGAAAGAAGTCTaGAGTGCAGACGGCCACAAG +
Preference number: 4 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGVPKEV*SADGHK
Trigger: CTTGTGGCCGTCTGCACTGCAGACTTCTTTCGGGAC...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCGGATGTTGGTGTGTGTaGCGGCCAAGGTGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASGCWCV*RPRWSG
Trigger: ACCTGACCACCTTGGCCGGCACACACACCAACATCC...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCGGCCTGCCGAATGCCTaGACTGCTGGTGACATACAG +
Preference number: 4 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASGLPNA*TAGDIQ
Trigger: CTGTATGTCACCAGCAGTGCAGGCATTCGGCAGGCC...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp AGTCCTGGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTTGGCCTTGTTGGTaGAGGAAATGTAATTGTTGT +
Preference number: 4 (lower is better)
Translates to: SPGMGGSSRSSGNPKGDSGWPCW*RKCNCC
Trigger: ACAACAATTACATTTCCTGCACCAACAAGGCCAACC...AGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCCAGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp CCAGGATGTGAAGGGGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGCACGGCTCTGGCTCCTaGCACCTCCTTGATGTGATC +
Preference number: 4 (lower is better)
Translates to: PGCEGVLLLLRAYCVCVLHGSGS*HLLDVI
Trigger: GATCACATCAAGGAGGTGGCAGGAGCCAGAGCCGTG...CAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACCCCTTCACATCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261615.5
CDS-3UTR GCA 90 bp GGATGTGAAGGGGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACAGCCGTAATGGGTCCTaGAGGAGCCACCCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: GCEGVLLLLRAYCVCVLNSRNGS*RSHPAG
Trigger: ACCAGCTGGGTGGCTCCTGCAGGACCCATTACGGCT...GTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACCCCTTCACATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261615.5
CDS-3UTR GCA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCGTTCAAGTTCAGTCCTaGCACCCACGGAGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGVQVQS*HPRSSP
Trigger: TGGAGAGCTCCGTGGGTGGCAGGACTGAACTTGAAC...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393092.7
CDS-3UTR CCA 90 bp TGTGAAGGGGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTTGTGCACTGCTGCCCTaGTGCCTCTGTGCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: CEGVLLLLRAYCVCVLNCCALLP*CLCAGL
Trigger: CAGGCCAGCACAGAGGCACCAGGGCAGCAGTGCACA...ACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACCCCTTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261615.5
CDS-3UTR CCA 90 bp TGTGAAGGGGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTGTGTGCCGGCCAAGGTaGTCAGGTTGGCCCTCTCGT +
Preference number: 4 (lower is better)
Translates to: CEGVLLLLRAYCVCVLNCVCRPR*SGWPSR
Trigger: ACGAGAGGGCCAACCTGACCACCTTGGCCGGCACAC...ACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACCCCTTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261615.5
CDS-3UTR CCA 90 bp GGATGTGAAGGGGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTACACGGACCAGAACTaGCCTCCCACAAAGCCGGCC +
Preference number: 4 (lower is better)
Translates to: GCEGVLLLLRAYCVCVLNYTDQN*PPTKPA
Trigger: GGCCGGCTTTGTGGGAGGCCAGTTCTGGTCCGTGTA...GTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACCCCTTCACATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261615.5
CDS-3UTR CCA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCACGGCGTCTTTGTTCTaGGTGTCGCAGGGCGTGTAC +
Preference number: 4 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASTASLF*VSQGVY
Trigger: GTACACGCCCTGCGACACCCAGAACAAAGACGCCGT...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp GGATGTGAAGGGGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACCCAAACTGCTGTCAATaGAGTGGCCGCCCTCCACGC +
Preference number: 4 (lower is better)
Translates to: GCEGVLLLLRAYCVCVLNPNCCQ*SGRPPR
Trigger: GCGTGGAGGGCGGCCACTCCATTGACAGCAGTTTGG...GTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACCCCTTCACATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261615.5
CDS-3UTR CCA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCAAGGGTGACAAGCCTTaGCTCTGGGGCTCGCTGTCT +
Preference number: 4 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASKGDKP*LWGSLS
Trigger: AGACAGCGAGCCCCAGAGCCAAGGCTTGTCACCCTT...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCAGATGGTCGGCCACTTaGGACAGGTTGGCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGRWSAT*DRLALL
Trigger: CAACAAGGCCAACCTGTCCCAAGTGGCCGACCATCT...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp TGTGAAGGGGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTGCTGGTCCTTGCATGTaGGCAGCAGGGCTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: CEGVLLLLRAYCVCVLNCAGPCM*AAGLLA
Trigger: TGCCAGGAGCCCTGCTGCCCACATGCAAGGACCAGC...ACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACCCCTTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261615.5
CDS-3UTR CCA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCCCTCTCAGGAGATGCTaGTCCTTGCATGTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASPLRRC*SLHVGS
Trigger: GCTGCCCACATGCAAGGACCAGCATCTCCTGAGAGG...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp CCAGGATGTGAAGGGGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGGTCCCGAAAGAAGTCTaGAGTGCAGACGGCCACAAG +
Preference number: 4 (lower is better)
Translates to: PGCEGVLLLLRAYCVCVLVPKEV*SADGHK
Trigger: CTTGTGGCCGTCTGCACTGCAGACTTCTTTCGGGAC...CAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACCCCTTCACATCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261615.5
CDS-3UTR GCA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCAACATATCCAGCAGCTaGCAGGGGAGGTCATTGTGC +
Preference number: 4 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGNISSS*QGRSLC
Trigger: GCACAATGACCTCCCCTGGCAGCTGCTGGATATGTT...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCTTGGCCCTCTCGTCCTaGAGCCGGTTGTTGAACATA +
Preference number: 4 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGLALSS*SRLLNI
Trigger: TATGTTCAACAACCGGCTGCAGGACGAGAGGGCCAA...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCTCCTTCACCACACGCTaGCCAAAGGGTGACAAGCCT +
Preference number: 4 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASSFTTR*PKGDKP
Trigger: AGGCTTGTCACCCTTTGGGCAGCGTGTGGTGAAGGA...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp GGATGTGAAGGGGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACCGTCCTCTCAGGAGATaGTGGTCCTTGCATGTGGGC +
Preference number: 4 (lower is better)
Translates to: GCEGVLLLLRAYCVCVLNRPLRR*WSLHVG
Trigger: GCCCACATGCAAGGACCAGCATCTCCTGAGAGGACG...GTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACCCCTTCACATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261615.5
CDS-3UTR CCA 90 bp GGATGTGAAGGGGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTCAGCTTGGGGATGTTaGTGTGTGTGCCGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: GCEGVLLLLRAYCVCVLNSAWGC*CVCRPR
Trigger: CCTTGGCCGGCACACACACCAACATCCCCAAGCTGA...GTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACCCCTTCACATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261615.5
CDS-3UTR CCA 90 bp TGTGAAGGGGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTATCCGGCACATGCGGTaGACCACGTCCATCTGCTCC +
Preference number: 4 (lower is better)
Translates to: CEGVLLLLRAYCVCVLNCIRHMR*TTSICS
Trigger: GGAGCAGATGGACGTGGTCCACCGCATGTGCCGGAT...ACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACCCCTTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261615.5
CDS-3UTR CCA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCCCACTTGGGACAGGTTaGCCTTGTTGGTGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGPLGTG*PCWCRK
Trigger: TTTCCTGCACCAACAAGGCCAACCTGTCCCAAGTGG...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCTCAGGTCTGGATACTTaGAGACGTCCTCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASSGLDT*RRPPAP
Trigger: AGGGGCTGGAGGACGTCTCCAAGTATCCAGACCTGA...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCCTCAGCGATCAGGTCTaGATACTTGGAGACGTCCTC +
Preference number: 4 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGLSDQV*ILGDVL
Trigger: GAGGACGTCTCCAAGTATCCAGACCTGATCGCTGAG...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCCCAGGTCACAAGGCTTaGGGGTTGTTTCTGGTGTTC +
Preference number: 4 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGPGHKA*GLFLVF
Trigger: GAACACCAGAAACAACCCCCAAGCCTTGTGACCTGG...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393092.7
CDS-3UTR TCA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCAGCTTCCTCATTTCCTaGGAGTGCCCTGAGATGTCC +
Preference number: 4 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASSFLIS*ECPEMS
Trigger: GGACATCTCAGGGCACTCTCAGGAAATGAGGAAGCT...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421184.5
CDS-3UTR GCA 90 bp CCAGGATGTGAAGGGGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGCCTCATGATCCTCTCTaGCTCGTCCCGAAAGAAGTC +
Preference number: 4 (lower is better)
Translates to: PGCEGVLLLLRAYCVCVLPHDPL*LVPKEV
Trigger: GACTTCTTTCGGGACGAGGCAGAGAGGATCATGAGG...CAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACCCCTTCACATCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261615.5
CDS-3UTR GCA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCCCTCATGATCCTCTCTaGCTCGTCCCGAAAGAAGTC +
Preference number: 4 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASPHDPL*LVPKEV
Trigger: GACTTCTTTCGGGACGAGGCAGAGAGGATCATGAGG...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR GCA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCGGGTGTTGCTTTTATTaGGGGCCTACTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGGCCFY*GPTVCV
Trigger: CACACACACAGTAGGCCCGCAATAAAAGCAACACCC...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCCCACTTGGGACAGGTTaGCCTTGTTGGTGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASPLGTG*PCWCRK
Trigger: TTTCCTGCACCAACAAGGCCAACCTGTCCCAAGTGG...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CCA 90 bp GGATGTGAAGGGGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTCAGGTCTGGATACTTaGAGACGTCCTCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: GCEGVLLLLRAYCVCVLNSGLDT*RRPPAP
Trigger: AGGGGCTGGAGGACGTCTCCAAGTATCCAGACCTGA...GTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACCCCTTCACATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261615.5
CDS-3UTR CCA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCTGCCCTGAGATGTCCTaGCAGTGTTTTTCCCTCATG +
Preference number: 4 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGCPEMS*QCFSLM
Trigger: CATGAGGGAAAAACACTGCCAGGACATCTCAGGGCA...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000421184.5
CDS-3UTR GCA 90 bp GGATGTGAAGGGGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACAACATATCCAGCAGCTaGCAGGGGAGGTCATTGTGC +
Preference number: 4 (lower is better)
Translates to: GCEGVLLLLRAYCVCVLNNISSS*QGRSLC
Trigger: GCACAATGACCTCCCCTGGCAGCTGCTGGATATGTT...GTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACCCCTTCACATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261615.5
CDS-3UTR CCA 90 bp GGATGTGAAGGGGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACCTCAGCGATCAGGTCTaGATACTTGGAGACGTCCTC +
Preference number: 4 (lower is better)
Translates to: GCEGVLLLLRAYCVCVLNLSDQV*ILGDVL
Trigger: GAGGACGTCTCCAAGTATCCAGACCTGATCGCTGAG...GTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACCCCTTCACATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261615.5
CDS-3UTR GCA 90 bp CCAGGATGTGAAGGGGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGGATGTGAAGGGGTGTTaGTTTTATTGCGGGCCTACT +
Preference number: 4 (lower is better)
Translates to: PGCEGVLLLLRAYCVCVLDVKGC*FYCGPT
Trigger: AGTAGGCCCGCAATAAAAGCAACACCCCTTCACATC...CAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACCCCTTCACATCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000261615.5
CDS-3UTR CCA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCCTTGGGGGTTGTTTCTaGTGTTCAAGTTCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASLGGCF*CSSSVL
Trigger: CAGGACTGAACTTGAACACCAGAAACAACCCCCAAG...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393092.7
CDS-3UTR GCA 90 bp TGTGAAGGGGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTGGTTGGCCTTGTTGGTaGAGGAAATGTAATTGTTGT +
Preference number: 4 (lower is better)
Translates to: CEGVLLLLRAYCVCVLNCGWPCW*RKCNCC
Trigger: ACAACAATTACATTTCCTGCACCAACAAGGCCAACC...ACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACCCCTTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261615.5
CDS GCA 90 bp CCCACGCCAGGCTCACAGCTGGGCTGGCCCTACCCGGCCACCTGCTaGCCCTCCCAGGCCCCTCCTCAGGAAGGTGAAACTGCCCCATTT +
Preference number: 5 (lower is better)
Translates to: PTPGSQLGWPYPATC*PSQAPPQEGETAPF
Trigger: AAATGGGGCAGTTTCACCTTCCTGAGGAGGGGCCTGGGAGGGGCAGCAGGTGGCCGGGTAGGGCCAGCCCAGCTGTGAGCCTGGCGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565249.5
CDS-3UTR CAA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCGCACGTTGCGCCGGCTaGCGCACACGCTGTAGGCCG +
Preference number: 5 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLARCAG*RTRCRP
Trigger: CGGCCTACAGCGTGTGCGCAAGCCGGCGCAACGTGC...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS TCA 90 bp TGCCCTGGTGCCTCTGTGCTGGCCTGGCTGGCCCGTGCAGAAGGATaGGCTTCAGGCTGTGAGGAGCCACTCTGCCCGCTTCCTGGCCGC +
Preference number: 5 (lower is better)
Translates to: CPGASVLAWLARAEG*ASGCEEPLCPLPGR
Trigger: GCGGCCAGGAAGCGGGCAGAGTGGCTCCTCACAGCCTGAAGCTCATCCTTCTGCACGGGCCAGCCAGGCCAGCACAGAGGCACCAGGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568281.5
CDS CCA 90 bp GCAGGGCAGGCGGTACCTGGCCTCCCACAAAGCCGGCCCTCAGCTTaGGGATGTTGGTGTGTGTGCCGGCCAAGGTGGTCAGGTTGGCCC +
Preference number: 5 (lower is better)
Translates to: AGQAVPGLPQSRPSA*GCWCVCRPRWSGWP
Trigger: GGGCCAACCTGACCACCTTGGCCGGCACACACACCAACATCCCCAAGCTGAGGGCCGGCTTTGTGGGAGGCCAGGTACCGCCTGCCCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561484.1
CDS CCA 90 bp CCACCCTCACAGCCCCCAGGGTCGGGGCTGCGGAGGTGGACGGGCTaGACCAGATGTGAGTCATCATCCTTCGTGGCTGGAAGTCCGGGG +
Preference number: 5 (lower is better)
Translates to: PPSQPPGSGLRRWTG*TRCESSSFVAGSPG
Trigger: CCCCGGACTTCCAGCCACGAAGGATGATGACTCACATCTGGTCCAGCCCGTCCACCTCCGCAGCCCCGACCCTGGGGGCTGTGAGGGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565249.5
CDS TCA 90 bp TGCCCTGGTGCCTCTGTGCTGGCCTGGCTGGCCCGTGCAGAAGGATaGGCTTCAGGCTGTGAGGAGCCACTCTGCCATGCGCGGGACAGG +
Preference number: 5 (lower is better)
Translates to: CPGASVLAWLARAEG*ASGCEEPLCHARDR
Trigger: CCTGTCCCGCGCATGGCAGAGTGGCTCCTCACAGCCTGAAGCTCATCCTTCTGCACGGGCCAGCCAGGCCAGCACAGAGGCACCAGGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393092.7
CDS GCA 90 bp GGCCTCCCACAAAGCCGGCCCTCAGCTTGGGGATGTTGGTGTGTGTaGCGGCCAAGGTGGTCAGGTTGGCCCTCTCGTCCTGCAGCCGGT +
Preference number: 5 (lower is better)
Translates to: GLPQSRPSAWGCWCV*RPRWSGWPSRPAAG
Trigger: ACCGGCTGCAGGACGAGAGGGCCAACCTGACCACCTTGGCCGGCACACACACCAACATCCCCAAGCTGAGGGCCGGCTTTGTGGGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
ENST00000561484.1
ENST00000564281.5
ENST00000565249.5
ENST00000568281.5
ENST00000570029.5
CDS-3UTR CAA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCCTCCGCACGGCGTCTTaGTTCTGGGTGTCGCAGGGC +
Preference number: 5 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLLRTAS*FWVSQG
Trigger: GCCCTGCGACACCCAGAACAAAGACGCCGTGCGGAG...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CAA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCTCAGCCCAGGGCGTGTaGCAGCTGTGGGTGAGGGTC +
Preference number: 5 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLSAQGV*QLWVRV
Trigger: GACCCTCACCCACAGCTGCAACACGCCCTGGGCTGA...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CAA 90 bp AGTCCTGGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTACGTCGTCAGGCACGTaGCGCCGGCTTGCGCACACG +
Preference number: 5 (lower is better)
Translates to: SPGMGGSSRSSGNPKGDSTSSGT*RRLAHT
Trigger: CGTGTGCGCAAGCCGGCGCAACGTGCCTGACGACGT...AGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCCAGGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS TCA 90 bp TGCCCTGGTGCCTCTGTGCTGGCCTGGCTGGCCCGTGCAGAAGGATaGGCTTCAGGCTGTGAGGAGCCACTCTGCCCTGGCCTCTGCGAT +
Preference number: 5 (lower is better)
Translates to: CPGASVLAWLARAEG*ASGCEEPLCPGLCD
Trigger: ATCGCAGAGGCCAGGGCAGAGTGGCTCCTCACAGCCTGAAGCTCATCCTTCTGCACGGGCCAGCCAGGCCAGCACAGAGGCACCAGGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564281.5
CDS GCA 90 bp CTGTTTCACCAGCCTCAGGACGTCGTCAGGCACGTTGCGCCGGCTTaGGCACACGCTGTAGGCCGAGGAGTGGCTGAAGATGACCGGGGC +
Preference number: 5 (lower is better)
Translates to: LFHQPQDVVRHVAPA*AHAVGRGVAEDDRG
Trigger: GCCCCGGTCATCTTCAGCCACTCCTCGGCCTACAGCGTGTGCGCAAGCCGGCGCAACGTGCCTGACGACGTCCTGAGGCTGGTGAAACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
ENST00000564281.5
ENST00000565249.5
CDS CCA 90 bp GCGGTACCTGGCCTCCCACAAAGCCGGCCCTCAGCTTGGGGATGTTaGTGTGTGTGCCGGCCAAGGTGGTCAGGTTGGCCCTCTCGTCCT +
Preference number: 5 (lower is better)
Translates to: AVPGLPQSRPSAWGC*CVCRPRWSGWPSRP
Trigger: AGGACGAGAGGGCCAACCTGACCACCTTGGCCGGCACACACACCAACATCCCCAAGCTGAGGGCCGGCTTTGTGGGAGGCCAGGTACCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561484.1
CDS CCA 90 bp GCTCCCACCCCACTCACCTGCCCAAAGGGTGACAAGCCTTGGCTCTaGGGCTCGCTGTCTCCCGTGTCCACCAGCCAGTTGTCAGCCCAG +
Preference number: 5 (lower is better)
Translates to: APTPLTCPKGDKPWL*GSLSPVSTSQLSAQ
Trigger: CTGGGCTGACAACTGGCTGGTGGACACGGGAGACAGCGAGCCCCAGAGCCAAGGCTTGTCACCCTTTGGGCAGGTGAGTGGGGTGGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565249.5
CDS CCA 90 bp TGCGGAGGTGGACGGGCTGGACCAGATGTGAGTCATCATCCTTCGTaGCTGGAAGTCCGGGGCCACTCAGGGCTCAGCACCCACCCTGGG +
Preference number: 5 (lower is better)
Translates to: CGGGRAGPDVSHHPS*LEVRGHSGLSTHPG
Trigger: CCCAGGGTGGGTGCTGAGCCCTGAGTGGCCCCGGACTTCCAGCCACGAAGGATGATGACTCACATCTGGTCCAGCCCGTCCACCTCCGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565249.5
CDS CCA 90 bp AAGTCGATGAGGACCCCCAGACGGTTCAGCTCCTTCACCACACGCTaGGAAGACAGGGCTCCGTCCACCCTCACAGCCCCCAGGGTCGGG +
Preference number: 5 (lower is better)
Translates to: KSMRTPRRFSSFTTR*EDRAPSTLTAPRVG
Trigger: CCCGACCCTGGGGGCTGTGAGGGTGGACGGAGCCCTGTCTTCCCAGCGTGTGGTGAAGGAGCTGAACCGTCTGGGGGTCCTCATCGACTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000565249.5
CDS-3UTR CAA 90 bp AGTCCTGGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTCTCCGCACGGCGTCTTaGTTCTGGGTGTCGCAGGGC +
Preference number: 5 (lower is better)
Translates to: SPGMGGSSRSSGNPKGDSLRTAS*FWVSQG
Trigger: GCCCTGCGACACCCAGAACAAAGACGCCGTGCGGAG...AGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCCAGGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CAA 90 bp AGTCCTGGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGTGTCCACCAGCCAGTaGTCAGCCCAGGGCGTGTTG +
Preference number: 5 (lower is better)
Translates to: SPGMGGSSRSSGNPKGDSVSTSQ*SAQGVL
Trigger: CAACACGCCCTGGGCTGACAACTGGCTGGTGGACAC...AGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCCAGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CAA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCGCCCCTCAGGGACCCTaGGAACACCATCAAAGTCCC +
Preference number: 5 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLAPQGP*EHHQSP
Trigger: GGGACTTTGATGGTGTTCCAAGGGTCCCTGAGGGGC...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CAA 90 bp AGTCCTGGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGAGCCTGTGTGAGGTaGCTGGCCTGTTCCACAGCC +
Preference number: 5 (lower is better)
Translates to: SPGMGGSSRSSGNPKGDSGACVR*LACSTA
Trigger: GGCTGTGGAACAGGCCAGCAACCTCACACAGGCTCC...AGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCCAGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS TCA 90 bp CGGCCAAGGTGGTCAGGTTGGCCCTCTCGTCCTGCAGCCGGTTGTTaGACATATCCAGCAGCTGCCAGGGGAGGTCATTGTGCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: RPRWSGWPSRPAAGC*TYPAAARGGHCALA
Trigger: GGCCAGGGCACAATGACCTCCCCTGGCAGCTGCTGGATATGTTCAACAACCGGCTGCAGGACGAGAGGGCCAACCTGACCACCTTGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565249.5
CDS GCA 90 bp AAGGTCTCCGGGTACATCCGGCACATGCGGTGGACCACGTCCATCTaGTCCAGCGTCCTCCGCACGGCGTCTTTGTTCTGGGTGTCGCAG +
Preference number: 5 (lower is better)
Translates to: KVSGYIRHMRWTTSI*SSVLRTASLFWVSQ
Trigger: CTGCGACACCCAGAACAAAGACGCCGTGCGGAGGACGCTGGAGCAGATGGACGTGGTCCACCGCATGTGCCGGATGTACCCGGAGACCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
ENST00000564281.5
ENST00000565249.5
CDS CCA 90 bp ACCAGAACTGGCCTCCCACAAAGCCGGCCCTCAGCTTGGGGATGTTaGTGTGTGTGCCGGCCAAGGTGGTCAGGTTGGCCCTCTCGTCCT +
Preference number: 5 (lower is better)
Translates to: TRTGLPQSRPSAWGC*CVCRPRWSGWPSRP
Trigger: AGGACGAGAGGGCCAACCTGACCACCTTGGCCGGCACACACACCAACATCCCCAAGCTGAGGGCCGGCTTTGTGGGAGGCCAGTTCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
ENST00000564281.5
ENST00000565249.5
ENST00000568281.5
ENST00000570029.5
CDS CCA 90 bp TGTACACGGACCAGAACTGGCCTCCCACAAAGCCGGCCCTCAGCTTaGGGATGTTGGTGTGTGTGCCGGCCAAGGTGGTCAGGTTGGCCC +
Preference number: 5 (lower is better)
Translates to: CTRTRTGLPQSRPSA*GCWCVCRPRWSGWP
Trigger: GGGCCAACCTGACCACCTTGGCCGGCACACACACCAACATCCCCAAGCTGAGGGCCGGCTTTGTGGGAGGCCAGTTCTGGTCCGTGTACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
ENST00000564281.5
ENST00000565249.5
ENST00000568281.5
ENST00000570029.5
CDS CCA 90 bp AGCTCCTTCACCACACGCTGCCCAAAGGGTGACAAGCCTTGGCTCTaGGGCTCGCTGTCTCCCGTGTCCACCAGCCAGTTGTCAGCCCAG +
Preference number: 5 (lower is better)
Translates to: SSFTTRCPKGDKPWL*GSLSPVSTSQLSAQ
Trigger: CTGGGCTGACAACTGGCTGGTGGACACGGGAGACAGCGAGCCCCAGAGCCAAGGCTTGTCACCCTTTGGGCAGCGTGTGGTGAAGGAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
ENST00000564281.5
CDS-3UTR CAA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCTGCCAGGGGAGGTCATaGTGCCCATCAATGACAGGG +
Preference number: 5 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLCQGRS*CPSMTG
Trigger: CCCTGTCATTGATGGGCACAATGACCTCCCCTGGCA...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CAA 90 bp AGTCCTGGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGCCCCTCAGGGACCCTaGGAACACCATCAAAGTCCC +
Preference number: 5 (lower is better)
Translates to: SPGMGGSSRSSGNPKGDSAPQGP*EHHQSP
Trigger: GGGACTTTGATGGTGTTCCAAGGGTCCCTGAGGGGC...AGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCCAGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CAA 90 bp AGTCCTGGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTAAGACCCTCAGCAGGTaGTCAGCCAGTGCGCCCTTG +
Preference number: 5 (lower is better)
Translates to: SPGMGGSSRSSGNPKGDSKTLSR*SASAPL
Trigger: CAAGGGCGCACTGGCTGACAACCTGCTGAGGGTCTT...AGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCCAGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CAA 90 bp AGTCCTGGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTAGGAGATGCTGGTCCTaGCATGTGGGCAGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: SPGMGGSSRSSGNPKGDSRRCWS*HVGSRA
Trigger: AGCCCTGCTGCCCACATGCAAGGACCAGCATCTCCT...AGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCCAGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS TCA 90 bp GCTCTGGACAGCTGCAGGGTGGCCTTCATGGTGGCCACAGACACGTaGGCCAAGTCGATGAGGACCCCCAGACGGTTCAGCTCCTTCACC +
Preference number: 5 (lower is better)
Translates to: ALDSCRVAFMVATDT*AKSMRTPRRFSSFT
Trigger: GGTGAAGGAGCTGAACCGTCTGGGGGTCCTCATCGACTTGGCTCACGTGTCTGTGGCCACCATGAAGGCCACCCTGCAGCTGTCCAGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
ENST00000564281.5
ENST00000565249.5
CDS TCA 90 bp GACCCTGGAGGAACACCACAGGGATGGTCCCACTGTAGCCAGGCCTaGGGTAGGAGACGGGATGACCCCACACAGGGCAAGCACAAGGCA +
Preference number: 5 (lower is better)
Translates to: DPGGTPQGWSHCSQA*GRRRDDPTQGKHKA
Trigger: TGCCTTGTGCTTGCCCTGTGTGGGGTCATCCCGTCTCCTACCTCAGGCCTGGCTACAGTGGGACCATCCCTGTGGTGTTCCTCCAGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561484.1
CDS CCA 90 bp CTGGTGACATACAGGAAGGTCTCCGGGTACATCCGGCACATGCGGTaGACCACGTCCATCTGCTCCAGCGTCCTCCGCACGGCGTCTTTG +
Preference number: 5 (lower is better)
Translates to: LVTYRKVSGYIRHMR*TTSICSSVLRTASL
Trigger: CAAAGACGCCGTGCGGAGGACGCTGGAGCAGATGGACGTGGTCCACCGCATGTGCCGGATGTACCCGGAGACCTTCCTGTATGTCACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
ENST00000564281.5
ENST00000565249.5
CDS-3UTR CAA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCTCGTCCTGCAGCCGGTaGTTGAACATATCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLSSCSR*LNISSS
Trigger: GCTGCTGGATATGTTCAACAACCGGCTGCAGGACGA...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CAA 90 bp AGTCCTGGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTATCAGGTCTGGATACTaGGAGACGTCCTCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: SPGMGGSSRSSGNPKGDSIRSGY*ETSSSP
Trigger: GGGGCTGGAGGACGTCTCCAAGTATCCAGACCTGAT...AGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCCAGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS GCA 90 bp TTGGTGTGTGTGCCGGCCAAGGTGGTCAGGTTGGCCCTCTCGTCCTaGAGCCGGTTGTTGAACATATCCAGCAGCTGCCAGGGGAGGTCA +
Preference number: 5 (lower is better)
Translates to: LVCVPAKVVRLALSS*SRLLNISSSCQGRS
Trigger: TGACCTCCCCTGGCAGCTGCTGGATATGTTCAACAACCGGCTGCAGGACGAGAGGGCCAACCTGACCACCTTGGCCGGCACACACACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
ENST00000561484.1
ENST00000564281.5
ENST00000565249.5
ENST00000568281.5
ENST00000570029.5
CDS CCA 90 bp TCCCAGGGAGACAGACCCGCCTCCTGCCTCCCAGGTCACAAGGCTTaGGGGTTGTTTCTGGTGTTCAAGTTCAGTCCTGCCACCCACGGA +
Preference number: 5 (lower is better)
Translates to: SQGDRPASCLPGHKA*GLFLVFKFSPATHG
Trigger: TCCGTGGGTGGCAGGACTGAACTTGAACACCAGAAACAACCCCCAAGCCTTGTGACCTGGGAGGCAGGAGGCGGGTCTGTCTCCCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393092.7
CDS-3UTR CAA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCGCACGTTGCGCCGGCTaGCGCACACGCTGTAGGCCG +
Preference number: 5 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASARCAG*RTRCRP
Trigger: CGGCCTACAGCGTGTGCGCAAGCCGGCGCAACGTGC...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CAA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCTCAGCCAGTGCGCCCTaGACCTCCGCCTCCGTCCAG +
Preference number: 5 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGSASAP*TSASVQ
Trigger: CTGGACGGAGGCGGAGGTCAAGGGCGCACTGGCTGA...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CAA 90 bp GGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTGGTCTCGGATGTGAAGGGGTGTaGCTTTTATTGCGGGCCTAC +
Preference number: 5 (lower is better)
Translates to: GMGGSSRSSGNPKGDSGLGCEGV*LLLRAY
Trigger: GTAGGCCCGCAATAAAAGCAACACCCCTTCACATCC...GAGACCAGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261615.5
CDS-3UTR CAA 90 bp AGTCCTGGGATGGGCGGGTCTTCCCGGAGCTCCGGGAACCCTAAAGGGGACTCTCCCAGGTCACAAGGCTaGGGGGTTGTTTCTGGTGTT +
Preference number: 5 (lower is better)
Translates to: SPGMGGSSRSSGNPKGDSPRSQG*GVVSGV
Trigger: AACACCAGAAACAACCCCCAAGCCTTGTGACCTGGG...AGAGTCCCCTTTAGGGTTCCCGGAGCTCCGGGAAGACCCGCCCATCCCAGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393092.7
CDS TCA 90 bp CGGCCAAGGTGGTCAGGTTGGCCCTCTCGTCCTGCAGCCGGTTGTTaGACATATCCAGCAGCTGCCAGGGGAGGTCATTGTGCCCATCAA +
Preference number: 5 (lower is better)
Translates to: RPRWSGWPSRPAAGC*TYPAAARGGHCAHQ
Trigger: TTGATGGGCACAATGACCTCCCCTGGCAGCTGCTGGATATGTTCAACAACCGGCTGCAGGACGAGAGGGCCAACCTGACCACCTTGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
ENST00000561484.1
ENST00000564281.5
ENST00000568281.5
ENST00000570029.5
CDS-3UTR CAA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCGCCAAGGTGGTCAGGTaGGCCCTCTCGTCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGAKVVR*ALSSCS
Trigger: GCTGCAGGACGAGAGGGCCAACCTGACCACCTTGGC...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CAA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCCTCCGCACGGCGTCTTaGTTCTGGGTGTCGCAGGGC +
Preference number: 5 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGLRTAS*FWVSQG
Trigger: GCCCTGCGACACCCAGAACAAAGACGCCGTGCGGAG...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CAA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCTCAGCCAGTGCGCCCTaGACCTCCGCCTCCGTCCAG +
Preference number: 5 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASSASAP*TSASVQ
Trigger: CTGGACGGAGGCGGAGGTCAAGGGCGCACTGGCTGA...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CAA 90 bp CCAGGATGTGAAGGGGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGGCCAAGGTGGTCAGGTaGGCCCTCTCGTCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: PGCEGVLLLLRAYCVCVLAKVVR*ALSSCS
Trigger: GCTGCAGGACGAGAGGGCCAACCTGACCACCTTGGC...CAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACCCCTTCACATCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261615.5
CDS-3UTR CAA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCGCCAAGGTGGTCAGGTaGGCCCTCTCGTCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASAKVVR*ALSSCS
Trigger: GCTGCAGGACGAGAGGGCCAACCTGACCACCTTGGC...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CAA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCTCAGCCCAGGGCGTGTaGCAGCTGTGGGTGAGGGTC +
Preference number: 5 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASSAQGV*QLWVRV
Trigger: GACCCTCACCCACAGCTGCAACACGCCCTGGGCTGA...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CAA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCGTGTCCACCAGCCAGTaGTCAGCCCAGGGCGTGTTG +
Preference number: 5 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGVSTSQ*SAQGVL
Trigger: CAACACGCCCTGGGCTGACAACTGGCTGGTGGACAC...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CAA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCGGAGCCTGTGTGAGGTaGCTGGCCTGTTCCACAGCC +
Preference number: 5 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGGACVR*LACSTA
Trigger: GGCTGTGGAACAGGCCAGCAACCTCACACAGGCTCC...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS GCA 90 bp GTCATTGTGCCCATCAATGACAGGGGAGTCCCTCATGATCCTCTCTaGCTCGTCCCGAAAGAAGTCTGCAGTGCAGACGGCCACAAGGGG +
Preference number: 5 (lower is better)
Translates to: VIVPINDRGVPHDPL*LVPKEVCSADGHKG
Trigger: CCCCTTGTGGCCGTCTGCACTGCAGACTTCTTTCGGGACGAGGCAGAGAGGATCATGAGGGACTCCCCTGTCATTGATGGGCACAATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
ENST00000561484.1
ENST00000564281.5
ENST00000568281.5
ENST00000570029.5
CDS GCA 90 bp TGGAACACCATCAAAGTCCCCACCAAAACCCACGGCTCTGGCTCCTaGCACCTCCTTGATGTGATCCAGATGGTCGGCCACTTGGGACAG +
Preference number: 5 (lower is better)
Translates to: WNTIKVPTKTHGSGS*HLLDVIQMVGHLGQ
Trigger: CTGTCCCAAGTGGCCGACCATCTGGATCACATCAAGGAGGTGGCAGGAGCCAGAGCCGTGGGTTTTGGTGGGGACTTTGATGGTGTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS GCA 90 bp TGGAACACCATCAAAGTCCCCACCAAAACCCACGGCTCTGGCTCCTaGCACCTCCTTGATGTGATCCAGATGGTCTGTCCAGGGAGCAGC +
Preference number: 5 (lower is better)
Translates to: WNTIKVPTKTHGSGS*HLLDVIQMVCPGSS
Trigger: GCTGCTCCCTGGACAGACCATCTGGATCACATCAAGGAGGTGGCAGGAGCCAGAGCCGTGGGTTTTGGTGGGGACTTTGATGGTGTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564281.5
ENST00000564645.1
CDS-3UTR CAA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCAAGCCGGCCCTCAGCTaGGGGATGTTGGTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGKPALS*GMLVCV
Trigger: CACACACACCAACATCCCCAAGCTGAGGGCCGGCTT...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CAA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCGGAGCCTGTGTGAGGTaGCTGGCCTGTTCCACAGCC +
Preference number: 5 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASGACVR*LACSTA
Trigger: GGCTGTGGAACAGGCCAGCAACCTCACACAGGCTCC...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CAA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCAGGAGATGCTGGTCCTaGCATGTGGGCAGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGRRCWS*HVGSRA
Trigger: AGCCCTGCTGCCCACATGCAAGGACCAGCATCTCCT...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CAA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCAGAACAGCCACCTCCTaGAGGGCTCGCACAGTACCC +
Preference number: 5 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGRTATS*RARTVP
Trigger: GGGTACTGTGCGAGCCCTCAAGGAGGTGGCTGTTCT...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393092.7
CDS-3UTR CAA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCTGCCAGGGGAGGTCATaGTGCCCATCAATGACAGGG +
Preference number: 5 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGCQGRS*CPSMTG
Trigger: CCCTGTCATTGATGGGCACAATGACCTCCCCTGGCA...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CAA 90 bp CCAGGATGTGAAGGGGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAAGCCGGCCCTCAGCTaGGGGATGTTGGTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: PGCEGVLLLLRAYCVCVLKPALS*GMLVCV
Trigger: CACACACACCAACATCCCCAAGCTGAGGGCCGGCTT...CAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACCCCTTCACATCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261615.5
CDS-3UTR CAA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCCAGATGGTCGGCCACTaGGGACAGGTTGGCCTTGTT +
Preference number: 5 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGQMVGH*GQVGLV
Trigger: AACAAGGCCAACCTGTCCCAAGTGGCCGACCATCTG...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CAA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCGCCCCTCAGGGACCCTaGGAACACCATCAAAGTCCC +
Preference number: 5 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASAPQGP*EHHQSP
Trigger: GGGACTTTGATGGTGTTCCAAGGGTCCCTGAGGGGC...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CAA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCAGGTCTGGATACTaGGAGACGTCCTCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGIRSGY*ETSSSP
Trigger: GGGGCTGGAGGACGTCTCCAAGTATCCAGACCTGAT...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CAA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCAAGACCCTCAGCAGGTaGTCAGCCAGTGCGCCCTTG +
Preference number: 5 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASKTLSR*SASAPL
Trigger: CAAGGGCGCACTGGCTGACAACCTGCTGAGGGTCTT...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CAA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCAGGAGATGCTGGTCCTaGCATGTGGGCAGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASRRCWS*HVGSRA
Trigger: AGCCCTGCTGCCCACATGCAAGGACCAGCATCTCCT...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS CCA 90 bp CCCCTTGGCCGCTCACACCCCACCTACCGGCCACTTGGGACAGGTTaGCCTTGTTGGTGCAGGAAATGTAATTGTTGTAGAAGTTCACCA +
Preference number: 5 (lower is better)
Translates to: PLGRSHPTYRPLGTG*PCWCRKCNCCRSSP
Trigger: TGGTGAACTTCTACAACAATTACATTTCCTGCACCAACAAGGCCAACCTGTCCCAAGTGGCCGGTAGGTGGGGTGTGAGCGGCCAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564281.5
CDS-3UTR CAA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCTGCCAGGGGAGGTCATaGTGCCCATCAATGACAGGG +
Preference number: 5 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASCQGRS*CPSMTG
Trigger: CCCTGTCATTGATGGGCACAATGACCTCCCCTGGCA...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CAA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCCAGATGGTCGGCCACTaGGGACAGGTTGGCCTTGTT +
Preference number: 5 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASQMVGH*GQVGLV
Trigger: AACAAGGCCAACCTGTCCCAAGTGGCCGACCATCTG...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CAA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCATCAGGTCTGGATACTaGGAGACGTCCTCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASIRSGY*ETSSSP
Trigger: GGGGCTGGAGGACGTCTCCAAGTATCCAGACCTGAT...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CAA 90 bp GGATGTGAAGGGGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACAAGACCCTCAGCAGGTaGTCAGCCAGTGCGCCCTTG +
Preference number: 5 (lower is better)
Translates to: GCEGVLLLLRAYCVCVLNKTLSR*SASAPL
Trigger: CAAGGGCGCACTGGCTGACAACCTGCTGAGGGTCTT...GTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACCCCTTCACATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261615.5
CDS CCA 90 bp CGCTCACACCCCACCTACCGGCCACTTGGGACAGGTTGGCCTTGTTaGTGCAGGAAATGTAATTGTTGTAGAAGTTCACCATCACCAGGC +
Preference number: 5 (lower is better)
Translates to: RSHPTYRPLGTGWPC*CRKCNCCRSSPSPG
Trigger: GCCTGGTGATGGTGAACTTCTACAACAATTACATTTCCTGCACCAACAAGGCCAACCTGTCCCAAGTGGCCGGTAGGTGGGGTGTGAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564281.5
CDS-3UTR CAA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCTCGTCCTGCAGCCGGTaGTTGAACATATCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASSSCSR*LNISSS
Trigger: GCTGCTGGATATGTTCAACAACCGGCTGCAGGACGA...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CAA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCGGGGTGTTGCTTTTATaGCGGGCCTACTGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGGVLLL*RAYCVC
Trigger: ACACACACAGTAGGCCCGCAATAAAAGCAACACCCC...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CAA 90 bp TTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCATCCGGGGTGTTGCTTTTATaGCGGGCCTACTGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: LLLLRAYCVCVLNCPQASGVLLL*RAYCVC
Trigger: ACACACACAGTAGGCCCGCAATAAAAGCAACACCCC...GGATGCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS-3UTR CAA 90 bp GGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTCCCCAGGCCACAAGGCTTGGGGGTaGTTTCTGGTGTTCAAGTTC +
Preference number: 5 (lower is better)
Translates to: GVAFIAGLLCVCPELSPGHKAWG*FLVFKF
Trigger: GAACTTGAACACCAGAAACAACCCCCAAGCCTTGTG...GCCTGGGGACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393092.7
CDS GCA 90 bp TCACACCCCACCTACCGGCCACTTGGGACAGGTTGGCCTTGTTGGTaGAGGAAATGTAATTGTTGTAGAAGTTCACCATCACCAGGCTGT +
Preference number: 5 (lower is better)
Translates to: SHPTYRPLGTGWPCW*RKCNCCRSSPSPGC
Trigger: ACAGCCTGGTGATGGTGAACTTCTACAACAATTACATTTCCTGCACCAACAAGGCCAACCTGTCCCAAGTGGCCGGTAGGTGGGGTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564281.5
CDS-3UTR CAA 90 bp TGTGAAGGGGTGTTGCTTTTATTGCGGGCCTACTGTGTGTGTGTCCTGAACTGTGGGGTGTTGCTTTTATaGCGGGCCTACTGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: CEGVLLLLRAYCVCVLNCGVLLL*RAYCVC
Trigger: ACACACACAGTAGGCCCGCAATAAAAGCAACACCCC...ACAGTTCAGGACACACACACAGTAGGCCCGCAATAAAAGCAACACCCCTTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000261615.5
CDS GCA 90 bp TGTGATCCAGATGGTCGGCCACTTGGGACAGGTTGGCCTTGTTGGTaGAGGAAATGTAATTGTTGTAGAAGTTCACCATCACCAGGCTGT +
Preference number: 5 (lower is better)
Translates to: CDPDGRPLGTGWPCW*RKCNCCRSSPSPGC
Trigger: ACAGCCTGGTGATGGTGAACTTCTACAACAATTACATTTCCTGCACCAACAAGGCCAACCTGTCCCAAGTGGCCGACCATCTGGATCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS CAA 90 bp GGCAGGGCAGGCGGTACCTGGCCTCCCACAAAGCCGGCCCTCAGCTaGGGGATGTTGGTGTGTGTGCCGGCCAAGGTGGTCAGGTTGGCC +
Preference number: 6 (lower is better)
Translates to: GRAGGTWPPTKPALS*GMLVCVPAKVVRLA
Trigger: GGCCAACCTGACCACCTTGGCCGGCACACACACCAACATCCCCAAGCTGAGGGCCGGCTTTGTGGGAGGCCAGGTACCGCCTGCCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561484.1
CDS CCA 72 bp GGGAGGCCAGCAGGAGCCCCCAGTGGCGATGGAGGCTaGAAGCCCCAGAGGAGTAGCCGTAATGGGTCCTGC +
Preference number: 6 (lower is better)
Translates to: GRPAGAPSGDGG*KPQRSSRNGSC
Trigger: GCAGGACCCATTACGGCTACTCCTCTGGGGCTTCCAGCCTCCATCGCCACTGGGGGCTCCTGCTGGCCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
ENST00000564281.5
ENST00000564645.1
CDS TCA 72 bp CTGGCTGGCCCGTGCAGAAGGATGAGCTTCAGGCTGTaGGGAGCCACTCTGCCATGCGCGGGACAGGGTCCC +
Preference number: 6 (lower is better)
Translates to: LAGPCRRMSFRL*GATLPCAGQGP
Trigger: GGGACCCTGTCCCGCGCATGGCAGAGTGGCTCCTCACAGCCTGAAGCTCATCCTTCTGCACGGGCCAGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393092.7
CDS TCA 72 bp GCCTCTGTGCTGGCCTGGCTGGCCCGTGCAGAAGGATaGGCTTCAGGCTGTGAGGAGCCACTCTGCCCTGGC +
Preference number: 6 (lower is better)
Translates to: ASVLAWLARAEG*ASGCEEPLCPG
Trigger: GCCAGGGCAGAGTGGCTCCTCACAGCCTGAAGCTCATCCTTCTGCACGGGCCAGCCAGGCCAGCACAGAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564281.5
CDS CCA 72 bp GGCCTCCCACAAAGCCGGCCCTCAGCTTGGGGATGTTaGTGTGTGTGCCGGCCAAGGTGGTCAGGTTGGCCC +
Preference number: 6 (lower is better)
Translates to: GLPQSRPSAWGC*CVCRPRWSGWP
Trigger: GGGCCAACCTGACCACCTTGGCCGGCACACACACCAACATCCCCAAGCTGAGGGCCGGCTTTGTGGGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
ENST00000561484.1
ENST00000564281.5
ENST00000565249.5
ENST00000568281.5
ENST00000570029.5
CDS CCA 72 bp GCCCCTCAGGGACCCTGTGTTGAGGCCAGGAGAACCTaGGCCCCCACACTAGGACACAGGTCCCTCCTCCAG +
Preference number: 6 (lower is better)
Translates to: APQGPCVEARRT*APTLGHRSLLQ
Trigger: CTGGAGGAGGGACCTGTGTCCTAGTGTGGGGGCCCAGGTTCTCCTGGCCTCAACACAGGGTCCCTGAGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564281.5
CDS CCA 72 bp CACACAGGGCAAGCACAAGGCAGGGCAGGCGGTACCTaGCCTCCCACAAAGCCGGCCCTCAGCTTGGGGATG +
Preference number: 6 (lower is better)
Translates to: HTGQAQGRAGGT*PPTKPALSLGM
Trigger: CATCCCCAAGCTGAGGGCCGGCTTTGTGGGAGGCCAGGTACCGCCTGCCCTGCCTTGTGCTTGCCCTGTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561484.1
CDS CCA 72 bp AGGACCCCCAGACGGTTCAGCTCCTTCACCACACGCTaGGAAGACAGGGCTCCGTCCACCCTCACAGCCCCC +
Preference number: 6 (lower is better)
Translates to: RTPRRFSSFTTR*EDRAPSTLTAP
Trigger: GGGGGCTGTGAGGGTGGACGGAGCCCTGTCTTCCCAGCGTGTGGTGAAGGAGCTGAACCGTCTGGGGGTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565249.5
CDS CAA 72 bp GGCGGTACCTGGCCTCCCACAAAGCCGGCCCTCAGCTaGGGGATGTTGGTGTGTGTGCCGGCCAAGGTGGTC +
Preference number: 6 (lower is better)
Translates to: GGTWPPTKPALS*GMLVCVPAKVV
Trigger: GACCACCTTGGCCGGCACACACACCAACATCCCCAAGCTGAGGGCCGGCTTTGTGGGAGGCCAGGTACCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561484.1
CDS TCA 72 bp GCCTCTGTGCTGGCCTGGCTGGCCCGTGCAGAAGGATaGGCTTCAGGCTGTGAGGAGCCACTCTGCCTGCCA +
Preference number: 6 (lower is better)
Translates to: ASVLAWLARAEG*ASGCEEPLCLP
Trigger: TGGCAGGCAGAGTGGCTCCTCACAGCCTGAAGCTCATCCTTCTGCACGGGCCAGCCAGGCCAGCACAGAGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261615.5
CDS TCA 72 bp GCCTCTGTGCTGGCCTGGCTGGCCCGTGCAGAAGGATaGGCTTCAGGCTGTGAGGAGCCACTCTGCCATGCG +
Preference number: 6 (lower is better)
Translates to: ASVLAWLARAEG*ASGCEEPLCHA
Trigger: CGCATGGCAGAGTGGCTCCTCACAGCCTGAAGCTCATCCTTCTGCACGGGCCAGCCAGGCCAGCACAGAGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393092.7
CDS TCA 72 bp GCCTCTGTGCTGGCCTGGCTGGCCCGTGCAGAAGGATaGGCTTCAGGCTGTGAGGAGCCACTCTGCCCGCTT +
Preference number: 6 (lower is better)
Translates to: ASVLAWLARAEG*ASGCEEPLCPL
Trigger: AAGCGGGCAGAGTGGCTCCTCACAGCCTGAAGCTCATCCTTCTGCACGGGCCAGCCAGGCCAGCACAGAGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568281.5
CDS GCA 72 bp CAGCCTCAGGACGTCGTCAGGCACGTTGCGCCGGCTTaGGCACACGCTGTAGGCCGAGGAGTGGCTGAAGAT +
Preference number: 6 (lower is better)
Translates to: QPQDVVRHVAPA*AHAVGRGVAED
Trigger: ATCTTCAGCCACTCCTCGGCCTACAGCGTGTGCGCAAGCCGGCGCAACGTGCCTGACGACGTCCTGAGGCTG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
ENST00000564281.5
ENST00000565249.5
CDS CCA 72 bp GCGGTACCTGGCCTCCCACAAAGCCGGCCCTCAGCTTaGGGATGTTGGTGTGTGTGCCGGCCAAGGTGGTCA +
Preference number: 6 (lower is better)
Translates to: AVPGLPQSRPSA*GCWCVCRPRWS
Trigger: TGACCACCTTGGCCGGCACACACACCAACATCCCCAAGCTGAGGGCCGGCTTTGTGGGAGGCCAGGTACCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561484.1
CDS CAA 72 bp CTGGCCTGTTCCACAGCCTCGAAGACCCTCAGCAGGTaGTCAGCCAGTGCGCCCTTGACCTCCGCCTCCGTC +
Preference number: 6 (lower is better)
Translates to: LACSTASKTLSR*SASAPLTSASV
Trigger: GACGGAGGCGGAGGTCAAGGGCGCACTGGCTGACAACCTGCTGAGGGTCTTCGAGGCTGTGGAACAGGCCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
ENST00000564281.5
ENST00000564645.1
CDS GCA 72 bp CAAAGCCGGCCCTCAGCTTGGGGATGTTGGTGTGTGTaGCGGCCAAGGTGGTCAGGTTGGCCCTCTCGTCCT +
Preference number: 6 (lower is better)
Translates to: QSRPSAWGCWCV*RPRWSGWPSRP
Trigger: AGGACGAGAGGGCCAACCTGACCACCTTGGCCGGCACACACACCAACATCCCCAAGCTGAGGGCCGGCTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
ENST00000561484.1
ENST00000564281.5
ENST00000565249.5
ENST00000568281.5
ENST00000570029.5
CDS GCA 72 bp GGGTACATCCGGCACATGCGGTGGACCACGTCCATCTaGTCCAGCGTCCTCCGCACGGCGTCTTTGTTCTGG +
Preference number: 6 (lower is better)
Translates to: GYIRHMRWTTSI*SSVLRTASLFW
Trigger: CCAGAACAAAGACGCCGTGCGGAGGACGCTGGAGCAGATGGACGTGGTCCACCGCATGTGCCGGATGTACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
ENST00000564281.5
ENST00000565249.5
CDS GCA 72 bp TGCCCAGCTGATAGAGTGCCCGCAGGACGCCCAAACTaGTGTCAATGGAGTGGCCGCCCTCCACGCCGATCA +
Preference number: 6 (lower is better)
Translates to: CPADRVPAGRPN*CQWSGRPPRRS
Trigger: TGATCGGCGTGGAGGGCGGCCACTCCATTGACAGCAGTTTGGGCGTCCTGCGGGCACTCTATCAGCTGGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
ENST00000564281.5
ENST00000565249.5
CDS GCA 72 bp TCTGTTTCACCAGCCTCAGGACGTCGTCAGGCACGTTaGGCCGGCTTGCGCACACGCTGTAGGCCGAGGAGT +
Preference number: 6 (lower is better)
Translates to: SVSPASGRRQAR*AGLRTRCRPRS
Trigger: ACTCCTCGGCCTACAGCGTGTGCGCAAGCCGGCGCAACGTGCCTGACGACGTCCTGAGGCTGGTGAAACAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
ENST00000564281.5
ENST00000565249.5
CDS CCA 72 bp TACAGGAAGGTCTCCGGGTACATCCGGCACATGCGGTaGACCACGTCCATCTGCTCCAGCGTCCTCCGCACG +
Preference number: 6 (lower is better)
Translates to: YRKVSGYIRHMR*TTSICSSVLRT
Trigger: CGTGCGGAGGACGCTGGAGCAGATGGACGTGGTCCACCGCATGTGCCGGATGTACCCGGAGACCTTCCTGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
ENST00000564281.5
ENST00000565249.5
CDS CCA 72 bp ACCACACGCTGCCCAAAGGGTGACAAGCCTTGGCTCTaGGGCTCGCTGTCTCCCGTGTCCACCAGCCAGTTG +
Preference number: 6 (lower is better)
Translates to: TTRCPKGDKPWL*GSLSPVSTSQL
Trigger: CAACTGGCTGGTGGACACGGGAGACAGCGAGCCCCAGAGCCAAGGCTTGTCACCCTTTGGGCAGCGTGTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
ENST00000564281.5
CDS CCA 72 bp TCCTTCACCACACGCTGCCCAAAGGGTGACAAGCCTTaGCTCTGGGGCTCGCTGTCTCCCGTGTCCACCAGC +
Preference number: 6 (lower is better)
Translates to: SFTTRCPKGDKP*LWGSLSPVSTS
Trigger: GCTGGTGGACACGGGAGACAGCGAGCCCCAGAGCCAAGGCTTGTCACCCTTTGGGCAGCGTGTGGTGAAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
ENST00000564281.5
CDS CCA 72 bp CCACTCACCTGCCCAAAGGGTGACAAGCCTTGGCTCTaGGGCTCGCTGTCTCCCGTGTCCACCAGCCAGTTG +
Preference number: 6 (lower is better)
Translates to: PLTCPKGDKPWL*GSLSPVSTSQL
Trigger: CAACTGGCTGGTGGACACGGGAGACAGCGAGCCCCAGAGCCAAGGCTTGTCACCCTTTGGGCAGGTGAGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565249.5
CDS CCA 72 bp GGACGGGCTGGACCAGATGTGAGTCATCATCCTTCGTaGCTGGAAGTCCGGGGCCACTCAGGGCTCAGCACC +
Preference number: 6 (lower is better)
Translates to: GRAGPDVSHHPS*LEVRGHSGLST
Trigger: GGTGCTGAGCCCTGAGTGGCCCCGGACTTCCAGCCACGAAGGATGATGACTCACATCTGGTCCAGCCCGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565249.5
CDS CAA 72 bp ACGTCCATCTGCTCCAGCGTCCTCCGCACGGCGTCTTaGTTCTGGGTGTCGCAGGGCGTGTACACGGACCAG +
Preference number: 6 (lower is better)
Translates to: TSICSSVLRTAS*FWVSQGVYTDQ
Trigger: CTGGTCCGTGTACACGCCCTGCGACACCCAGAACAAAGACGCCGTGCGGAGGACGCTGGAGCAGATGGACGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
ENST00000564281.5
ENST00000565249.5
ENST00000568281.5
ENST00000570029.5
CDS CAA 90 bp GTGTACACGGACCAGAACTGGCCTCCCACAAAGCCGGCCCTCAGCTaGGGGATGTTGGTGTGTGTGCCGGCCAAGGTGGTCAGGTTGGCC +
Preference number: 6 (lower is better)
Translates to: VYTDQNWPPTKPALS*GMLVCVPAKVVRLA
Trigger: GGCCAACCTGACCACCTTGGCCGGCACACACACCAACATCCCCAAGCTGAGGGCCGGCTTTGTGGGAGGCCAGTTCTGGTCCGTGTACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
ENST00000564281.5
ENST00000565249.5
ENST00000568281.5
ENST00000570029.5
CDS CAA 90 bp GTGCCGGCCAAGGTGGTCAGGTTGGCCCTCTCGTCCTGCAGCCGGTaGTTGAACATATCCAGCAGCTGCCAGGGGAGGTCATTGTGCCCA +
Preference number: 6 (lower is better)
Translates to: VPAKVVRLALSSCSR*LNISSSCQGRSLCP
Trigger: TGGGCACAATGACCTCCCCTGGCAGCTGCTGGATATGTTCAACAACCGGCTGCAGGACGAGAGGGCCAACCTGACCACCTTGGCCGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
ENST00000561484.1
ENST00000564281.5
ENST00000568281.5
ENST00000570029.5
CDS CAA 90 bp GTCCCAGGGAGACAGACCCGCCTCCTGCCTCCCAGGTCACAAGGCTaGGGGGTTGTTTCTGGTGTTCAAGTTCAGTCCTGCCACCCACGG +
Preference number: 6 (lower is better)
Translates to: VPGRQTRLLPPRSQG*GVVSGVQVQSCHPR
Trigger: CCGTGGGTGGCAGGACTGAACTTGAACACCAGAAACAACCCCCAAGCCTTGTGACCTGGGAGGCAGGAGGCGGGTCTGTCTCCCTGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393092.7
CDS CAA 90 bp GTGCCGGCCAAGGTGGTCAGGTTGGCCCTCTCGTCCTGCAGCCGGTaGTTGAACATATCCAGCAGCTGCCAGGGGAGGTCATTGTGCCCT +
Preference number: 6 (lower is better)
Translates to: VPAKVVRLALSSCSR*LNISSSCQGRSLCP
Trigger: AGGGCACAATGACCTCCCCTGGCAGCTGCTGGATATGTTCAACAACCGGCTGCAGGACGAGAGGGCCAACCTGACCACCTTGGCCGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565249.5
CDS TCA 72 bp GCCAGTTGTCAGCCCAGGGCGTGTTGCAGCTGTGGGTaGGGGTCAGGTACCGCATGCCCAGCTGATAGAGTG +
Preference number: 6 (lower is better)
Translates to: ASCQPRACCSCG*GSGTACPADRV
Trigger: CACTCTATCAGCTGGGCATGCGGTACCTGACCCTCACCCACAGCTGCAACACGCCCTGGGCTGACAACTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
ENST00000564281.5
ENST00000565249.5
CDS TCA 72 bp AGGACACAGGTCCCTCCTCCAGCCACCTCATCCCTCTaGCGAGGCCATGAACCTCCCGGCTCATCCACAGGA +
Preference number: 6 (lower is better)
Translates to: RTQVPPPATSSL*RGHEPPGSSTG
Trigger: TCCTGTGGATGAGCCGGGAGGTTCATGGCCTCGTCAGAGGGATGAGGTGGCTGGAGGAGGGACCTGTGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564281.5
CDS TCA 72 bp GGAACACCACAGGGATGGTCCCACTGTAGCCAGGCCTaGGGTAGGAGACGGGATGACCCCACACAGGGCAAG +
Preference number: 6 (lower is better)
Translates to: GTPQGWSHCSQA*GRRRDDPTQGK
Trigger: CTTGCCCTGTGTGGGGTCATCCCGTCTCCTACCTCAGGCCTGGCTACAGTGGGACCATCCCTGTGGTGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561484.1
CDS GCA 72 bp GTGCCGGCCAAGGTGGTCAGGTTGGCCCTCTCGTCCTaGAGCCGGTTGTTGAACATATCCAGCAGCTGCCAG +
Preference number: 6 (lower is better)
Translates to: VPAKVVRLALSS*SRLLNISSSCQ
Trigger: CTGGCAGCTGCTGGATATGTTCAACAACCGGCTGCAGGACGAGAGGGCCAACCTGACCACCTTGGCCGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
ENST00000561484.1
ENST00000564281.5
ENST00000565249.5
ENST00000568281.5
ENST00000570029.5
CDS CCA 72 bp ATCTGCTCCAGCGTCCTCCGCACGGCGTCTTTGTTCTaGGTGTCGCAGGGCGTGTACACGGACCAGAACTGG +
Preference number: 6 (lower is better)
Translates to: ICSSVLRTASLF*VSQGVYTDQNW
Trigger: CCAGTTCTGGTCCGTGTACACGCCCTGCGACACCCAGAACAAAGACGCCGTGCGGAGGACGCTGGAGCAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
ENST00000564281.5
ENST00000565249.5
ENST00000568281.5
ENST00000570029.5
CDS CAA 72 bp GCCCCCTTGGCCGCTCACACCCCACCTACCGGCCACTaGGGACAGGTTGGCCTTGTTGGTGCAGGAAATGTA +
Preference number: 6 (lower is better)
Translates to: APLAAHTPPTGH*GQVGLVGAGNV
Trigger: TACATTTCCTGCACCAACAAGGCCAACCTGTCCCAAGTGGCCGGTAGGTGGGGTGTGAGCGGCCAAGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564281.5
CDS CAA 90 bp GGAGACAGACCCGCCTCCTGCCTCCCAGGTCACAAGGCTTGGGGGTaGTTTCTGGTGTTCAAGTTCAGTCCTGCCACCCACGGAGCTCTC +
Preference number: 6 (lower is better)
Translates to: GDRPASCLPGHKAWG*FLVFKFSPATHGAL
Trigger: GAGAGCTCCGTGGGTGGCAGGACTGAACTTGAACACCAGAAACAACCCCCAAGCCTTGTGACCTGGGAGGCAGGAGGCGGGTCTGTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393092.7
CDS TCA 72 bp CTGGCTGGCCCGTGCAGAAGGATGAGCTTCAGGCTGTaGGGAGCCACTCTGCCTCCCCCAAGGCTAGAAACT +
Preference number: 6 (lower is better)
Translates to: LAGPCRRMSFRL*GATLPPPRLET
Trigger: AGTTTCTAGCCTTGGGGGAGGCAGAGTGGCTCCTCACAGCCTGAAGCTCATCCTTCTGCACGGGCCAGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000421184.5
ENST00000570029.5
CDS TCA 72 bp CTGGCTGGCCCGTGCAGAAGGATGAGCTTCAGGCTGTaGGGAGCCACTCTGCCTGTAATCCCAGCTACTCGG +
Preference number: 6 (lower is better)
Translates to: LAGPCRRMSFRL*GATLPVIPATR
Trigger: CCGAGTAGCTGGGATTACAGGCAGAGTGGCTCCTCACAGCCTGAAGCTCATCCTTCTGCACGGGCCAGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561484.1
CDS CAA 72 bp CCCGCCTCCTGCCTCCCAGGTCACAAGGCTTGGGGGTaGTTTCTGGTGTTCAAGTTCAGTCCTGCCACCCAC +
Preference number: 6 (lower is better)
Translates to: PASCLPGHKAWG*FLVFKFSPATH
Trigger: GTGGGTGGCAGGACTGAACTTGAACACCAGAAACAACCCCCAAGCCTTGTGACCTGGGAGGCAGGAGGCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393092.7
CDS GCA 72 bp TCGTCCTGCAGCCGGTTGTTGAACATATCCAGCAGCTaGCAGGGGAGGTCATTGTGCCCTGGCCTCTGCGAT +
Preference number: 6 (lower is better)
Translates to: SSCSRLLNISSS*QGRSLCPGLCD
Trigger: ATCGCAGAGGCCAGGGCACAATGACCTCCCCTGGCAGCTGCTGGATATGTTCAACAACCGGCTGCAGGACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565249.5
CDS CCA 72 bp GACAGACCCGCCTCCTGCCTCCCAGGTCACAAGGCTTaGGGGTTGTTTCTGGTGTTCAAGTTCAGTCCTGCC +
Preference number: 6 (lower is better)
Translates to: DRPASCLPGHKA*GLFLVFKFSPA
Trigger: GGCAGGACTGAACTTGAACACCAGAAACAACCCCCAAGCCTTGTGACCTGGGAGGCAGGAGGCGGGTCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393092.7
CDS CAA 72 bp GGGATGTTGGTGTGTGTGCCGGCCAAGGTGGTCAGGTaGGCCCTCTCGTCCTGCAGCCGGTTGTTGAACATA +
Preference number: 6 (lower is better)
Translates to: GMLVCVPAKVVR*ALSSCSRLLNI
Trigger: TATGTTCAACAACCGGCTGCAGGACGAGAGGGCCAACCTGACCACCTTGGCCGGCACACACACCAACATCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
ENST00000561484.1
ENST00000564281.5
ENST00000565249.5
ENST00000568281.5
ENST00000570029.5
CDS GCA 72 bp ATCAAAGTCCCCACCAAAACCCACGGCTCTGGCTCCTaGCACCTCCTTGATGTGATCCAGATGGTCGGCCAC +
Preference number: 6 (lower is better)
Translates to: IKVPTKTHGSGS*HLLDVIQMVGH
Trigger: GTGGCCGACCATCTGGATCACATCAAGGAGGTGGCAGGAGCCAGAGCCGTGGGTTTTGGTGGGGACTTTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
CDS GCA 72 bp TCGTCCTGCAGCCGGTTGTTGAACATATCCAGCAGCTaGCAGGGGAGGTCATTGTGCCCATCAATGACAGGG +
Preference number: 6 (lower is better)
Translates to: SSCSRLLNISSS*QGRSLCPSMTG
Trigger: CCCTGTCATTGATGGGCACAATGACCTCCCCTGGCAGCTGCTGGATATGTTCAACAACCGGCTGCAGGACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5
ENST00000561484.1
ENST00000564281.5
ENST00000568281.5
ENST00000570029.5
CDS GCA 72 bp GGCTTGGGGGTTGTTTCTGGTGTTCAAGTTCAGTCCTaGCACCCACGGAGCTCTCCAGCTACAGAACAGCCA +
Preference number: 6 (lower is better)
Translates to: GLGVVSGVQVQS*HPRSSPATEQP
Trigger: TGGCTGTTCTGTAGCTGGAGAGCTCCGTGGGTGGCAGGACTGAACTTGAACACCAGAAACAACCCCCAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393092.7
CDS GCA 72 bp ATCAAAGTCCCCACCAAAACCCACGGCTCTGGCTCCTaGCACCTCCTTGATGTGATCCAGATGGTCTGTCCA +
Preference number: 6 (lower is better)
Translates to: IKVPTKTHGSGS*HLLDVIQMVCP
Trigger: TGGACAGACCATCTGGATCACATCAAGGAGGTGGCAGGAGCCAGAGCCGTGGGTTTTGGTGGGGACTTTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564281.5
ENST00000564645.1
CDS CCA 72 bp CGCTCACACCCCACCTACCGGCCACTTGGGACAGGTTaGCCTTGTTGGTGCAGGAAATGTAATTGTTGTAGA +
Preference number: 6 (lower is better)
Translates to: RSHPTYRPLGTG*PCWCRKCNCCR
Trigger: TCTACAACAATTACATTTCCTGCACCAACAAGGCCAACCTGTCCCAAGTGGCCGGTAGGTGGGGTGTGAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564281.5
CDS CCA 72 bp CCCACCTACCGGCCACTTGGGACAGGTTGGCCTTGTTaGTGCAGGAAATGTAATTGTTGTAGAAGTTCACCA +
Preference number: 6 (lower is better)
Translates to: PTYRPLGTGWPC*CRKCNCCRSSP
Trigger: TGGTGAACTTCTACAACAATTACATTTCCTGCACCAACAAGGCCAACCTGTCCCAAGTGGCCGGTAGGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564281.5
CDS CCA 72 bp CCAGATGGTCGGCCACTTGGGACAGGTTGGCCTTGTTaGTGCAGGAAATGTAATTGTTGTAGAAGTTCACCA +
Preference number: 6 (lower is better)
Translates to: PDGRPLGTGWPC*CRKCNCCRSSP
Trigger: TGGTGAACTTCTACAACAATTACATTTCCTGCACCAACAAGGCCAACCTGTCCCAAGTGGCCGACCATCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261615.5
ENST00000393092.7
ENST00000421184.5