Pregenerated sensors for DPCD (Homo sapiens)
Ensembl gene IDs: ENSG00000166171Ensembl transcript IDs: ENST00000370147.5, ENST00000370151.9, ENST00000434727.1, ENST00000470165.1, ENST00000475443.1, ENST00000626968.2
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | GCTCCTAGAAGACAGGAGGCTGCCGTGGTCAAGAAGGGCCAAGCCTaGAAGTCTCACGGCACCCCCTGTGGTGGAGGTATAAGGCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: APRRQEAAVVKKGQA*KSHGTPCGGGIRLR Trigger: CCTGAGCCTTATACCTCCACCACAGGGGGTGCCGTGAGACTTCAAGGCTTGGCCCTTCTTGACCACGGCAGCCTCCTGTCTTCTAGGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370151.9 |
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| 3UTR-3UTR CCA 90 bp | ATGACTCACTGGCTAGGAGTGCCCCATGCCCAGTTCTTAGAGACCCTTGATAGCTCACGGCACCCCCTGTaGTGGAGGTATAAGGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: MTHWLGVPHAQFLETLDSSRHPL*WRYKAQ Trigger: CTGAGCCTTATACCTCCACCACAGGGGGTGCCGTGA...GCTATCAAGGGTCTCTAAGAACTGGGCATGGGGCACTCCTAGCCAGTGAGTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370151.9 |
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| 3UTR-3UTR CAA 90 bp | CTCAGGAAATATGACCATGACTCACTGGCTAGGAGTGCCCCATGCCCAGTTCTTAAGAAGGGCCAAGCCTaGAAGTCTCACGGCACCCCC | + |
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Preference number: 3 (lower is better) Translates to: LRKYDHDSLARSAPCPVLKKGQA*KSHGTP Trigger: GGGGGTGCCGTGAGACTTCAAGGCTTGGCCCTTCTT...AAGAACTGGGCATGGGGCACTCCTAGCCAGTGAGTCATGGTCATATTTCCTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370151.9 |
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| CDS-3UTR TCA 90 bp | AGCCTTGAAGTCTCACGGCACCCCCTGTGGTGGAGGTATAAGGCTCAGGGGCCAAGAAGGGCCAAGCCTTaGAGTCTCACGGCACCCCCT | + |
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Preference number: 4 (lower is better) Translates to: SLEVSRHPLWWRYKAQGPRRAKP*SLTAPP Trigger: AGGGGGTGCCGTGAGACTTCAAGGCTTGGCCCTTCT...TGGCCCCTGAGCCTTATACCTCCACCACAGGGGGTGCCGTGAGACTTCAAGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000370151.9 |
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| CDS-3UTR CCA 90 bp | AGCCTTGAAGTCTCACGGCACCCCCTGTGGTGGAGGTATAAGGCTCAGGGGCCAGACAGGAGGCTGCCGTaGTCAAGAAGGGCCAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: SLEVSRHPLWWRYKAQGPDRRLP*SRRAKP Trigger: AGGCTTGGCCCTTCTTGACCACGGCAGCCTCCTGTC...TGGCCCCTGAGCCTTATACCTCCACCACAGGGGGTGCCGTGAGACTTCAAGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370151.9 |
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| CDS-3UTR CCA 90 bp | AAGACAGGAGGCTGCCGTGGTCAAGAAGGGCCAAGCCTTGAAGTCTCACGGCACAGCAGCGCAGTCTTCTaGGCTGTCCGCAGACTCTCC | + |
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Preference number: 4 (lower is better) Translates to: KTGGCRGQEGPSLEVSRHSSAVF*AVRRLS Trigger: GGAGAGTCTGCGGACAGCCCAGAAGACTGCGCTGCT...GTGCCGTGAGACTTCAAGGCTTGGCCCTTCTTGACCACGGCAGCCTCCTGTCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370151.9 |
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| 3UTR CAA 72 bp | AGACAGGAGGCTGCCGTGGTCAAGAAGGGCCAAGCCTaGAAGTCTCACGGCACCCCCTGTGGTGGAGGTATA | + |
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Preference number: 4 (lower is better) Translates to: RQEAAVVKKGQA*KSHGTPCGGGI Trigger: TATACCTCCACCACAGGGGGTGCCGTGAGACTTCAAGGCTTGGCCCTTCTTGACCACGGCAGCCTCCTGTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370151.9 |
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| CDS-3UTR GCA 90 bp | CACAACCTCCTTTGGCTTCTGGTAAGAGATGATCAGGGTGCAGTTGGCGTGGGCGGTGCCATGCACACCTaGACACCGCATGGCCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: HNLLWLLVRDDQGAVGVGGAMHT*TPHGQR Trigger: CCTCTGGCCATGCGGTGTGCAGGTGTGCATGGCACC...GCCCACGCCAACTGCACCCTGATCATCTCTTACCAGAAGCCAAAGGAGGTTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370147.5 |
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| CDS-3UTR CCA 90 bp | AAGACAGGAGGCTGCCGTGGTCAAGAAGGGCCAAGCCTTGAAGTCTCACGGCACTCACGGCACCCCCTGTaGTGGAGGTATAAGGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KTGGCRGQEGPSLEVSRHSRHPL*WRYKAQ Trigger: CTGAGCCTTATACCTCCACCACAGGGGGTGCCGTGA...GTGCCGTGAGACTTCAAGGCTTGGCCCTTCTTGACCACGGCAGCCTCCTGTCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370151.9 |
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| CDS-3UTR GCA 90 bp | AAGACAGGAGGCTGCCGTGGTCAAGAAGGGCCAAGCCTTGAAGTCTCACGGCACTGCAGTCCCCATCGTTaGTGTGGGCTGTCTTCACCT | + |
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Preference number: 4 (lower is better) Translates to: KTGGCRGQEGPSLEVSRHCSPHR*CGLSSP Trigger: AGGTGAAGACAGCCCACAGCAACGATGGGGACTGCA...GTGCCGTGAGACTTCAAGGCTTGGCCCTTCTTGACCACGGCAGCCTCCTGTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370151.9 |
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| CDS-3UTR CCA 90 bp | CACAACCTCCTTTGGCTTCTGGTAAGAGATGATCAGGGTGCAGTTGGCGTGGGCAGCAGCGCAGTCTTCTaGGCTGTCCGCAGACTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HNLLWLLVRDDQGAVGVGSSAVF*AVRRLS Trigger: GGAGAGTCTGCGGACAGCCCAGAAGACTGCGCTGCT...GCCCACGCCAACTGCACCCTGATCATCTCTTACCAGAAGCCAAAGGAGGTTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370147.5 |
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| CDS-3UTR CCA 90 bp | CACAACCTCCTTTGGCTTCTGGTAAGAGATGATCAGGGTGCAGTTGGCGTGGGCAGGGTGCAGTTGGCGTaGGCAAAGCTCAGCAAGGCG | + |
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Preference number: 4 (lower is better) Translates to: HNLLWLLVRDDQGAVGVGRVQLA*AKLSKA Trigger: CGCCTTGCTGAGCTTTGCCCACGCCAACTGCACCCT...GCCCACGCCAACTGCACCCTGATCATCTCTTACCAGAAGCCAAAGGAGGTTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370147.5 |
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| CDS-3UTR CCA 90 bp | TTGATAGCTCCTAGAAGACAGGAGGCTGCCGTGGTCAAGAAGGGCCAAGCCTTGAGGGTGCAGTTGGCGTaGGCAAAGCTCAGCAAGGCG | + |
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Preference number: 4 (lower is better) Translates to: LIAPRRQEAAVVKKGQALRVQLA*AKLSKA Trigger: CGCCTTGCTGAGCTTTGCCCACGCCAACTGCACCCT...CAAGGCTTGGCCCTTCTTGACCACGGCAGCCTCCTGTCTTCTAGGAGCTATCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370151.9 |
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| CDS-3UTR CCA 90 bp | CACAACCTCCTTTGGCTTCTGGTAAGAGATGATCAGGGTGCAGTTGGCGTGGGCCACCTGCACACCGCATaGCCAGAGGGGTCCAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: HNLLWLLVRDDQGAVGVGHLHTA*PEGSRE Trigger: TTCTCTGGACCCCTCTGGCCATGCGGTGTGCAGGTG...GCCCACGCCAACTGCACCCTGATCATCTCTTACCAGAAGCCAAAGGAGGTTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370147.5 |
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| CDS-3UTR GCA 90 bp | CACAACCTCCTTTGGCTTCTGGTAAGAGATGATCAGGGTGCAGTTGGCGTGGGCTTCCTTCTCCCGTCCTaGAGCAGCGCAGTCTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: HNLLWLLVRDDQGAVGVGFLLPS*SSAVFW Trigger: CCAGAAGACTGCGCTGCTGCAGGACGGGAGAAGGAA...GCCCACGCCAACTGCACCCTGATCATCTCTTACCAGAAGCCAAAGGAGGTTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370147.5 |
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| CDS-3UTR GCA 90 bp | TTGATAGCTCCTAGAAGACAGGAGGCTGCCGTGGTCAAGAAGGGCCAAGCCTTGTTCCTTCTCCCGTCCTaGAGCAGCGCAGTCTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: LIAPRRQEAAVVKKGQALFLLPS*SSAVFW Trigger: CCAGAAGACTGCGCTGCTGCAGGACGGGAGAAGGAA...CAAGGCTTGGCCCTTCTTGACCACGGCAGCCTCCTGTCTTCTAGGAGCTATCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370151.9 |
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| CDS-3UTR GCA 90 bp | CACAACCTCCTTTGGCTTCTGGTAAGAGATGATCAGGGTGCAGTTGGCGTGGGCCTATCTCAGAGGGGGTaGCATGCACACCTGCACACC | + |
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Preference number: 4 (lower is better) Translates to: HNLLWLLVRDDQGAVGVGLSQRG*HAHLHT Trigger: GGTGTGCAGGTGTGCATGGCACCCCCTCTGAGATAG...GCCCACGCCAACTGCACCCTGATCATCTCTTACCAGAAGCCAAAGGAGGTTGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370147.5 |
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| CDS-3UTR TCA 90 bp | CAAGAAGGGCCAAGCCTTGAAGTCTCACGGCACCCCCTGTGGTGGAGGTATAAGGCTTCTGGTAAGAGATaGTCAGGGTGCAGTTGGCGT | + |
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Preference number: 4 (lower is better) Translates to: QEGPSLEVSRHPLWWRYKASGKR*SGCSWR Trigger: ACGCCAACTGCACCCTGATCATCTCTTACCAGAAGC...CTTATACCTCCACCACAGGGGGTGCCGTGAGACTTCAAGGCTTGGCCCTTCTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370151.9 |
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| CDS-3UTR CCA 90 bp | AACCTCCTTTGGCTTCTGGTAAGAGATGATCAGGGTGCAGTTGGCGTGGGCAAAACTTCAAGCTGCCACTaGCCCATGGCTCCCAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: NLLWLLVRDDQGAVGVGKTSSCH*PMAPRA Trigger: TGCCCTGGGAGCCATGGGCCAGTGGCAGCTTGAAGT...TTTGCCCACGCCAACTGCACCCTGATCATCTCTTACCAGAAGCCAAAGGAGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370147.5 |
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| CDS-3UTR CCA 90 bp | CTCAGGAAATATGACCATGACTCACTGGCTAGGAGTGCCCCATGCCCAGTTCTTACTTCAAGCTGCCACTaGCCCATGGCTCCCAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: LRKYDHDSLARSAPCPVLTSSCH*PMAPRA Trigger: TGCCCTGGGAGCCATGGGCCAGTGGCAGCTTGAAGT...AAGAACTGGGCATGGGGCACTCCTAGCCAGTGAGTCATGGTCATATTTCCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370151.9 |
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| CDS-3UTR CCA 90 bp | GCCGTGGTCAAGAAGGGCCAAGCCTTGAAGTCTCACGGCACCCCCTGTGGTGGATCATCCAGAGGTAGCTaGTGTCTATCTAGATCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AVVKKGQALKSHGTPCGGSSRGS*CLSRSG Trigger: TCCTGATCTAGATAGACACCAGCTACCTCTGGATGA...TCCACCACAGGGGGTGCCGTGAGACTTCAAGGCTTGGCCCTTCTTGACCACGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370151.9 |
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| CDS-3UTR CCA 90 bp | AGGAAATATGACCATGACTCACTGGCTAGGAGTGCCCCATGCCCAGTTCTTAGACGGCACCCCCTGTGGTaGAGGTATAAGGCTCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: RKYDHDSLARSAPCPVLRRHPLW*RYKAQG Trigger: CCCCTGAGCCTTATACCTCCACCACAGGGGGTGCCG...TCTAAGAACTGGGCATGGGGCACTCCTAGCCAGTGAGTCATGGTCATATTTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370151.9 |
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| CDS-3UTR TCA 90 bp | CACAACCTCCTTTGGCTTCTGGTAAGAGATGATCAGGGTGCAGTTGGCGTGGGCGCTTCTGGTAAGAGATaGTCAGGGTGCAGTTGGCGT | + |
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Preference number: 4 (lower is better) Translates to: HNLLWLLVRDDQGAVGVGASGKR*SGCSWR Trigger: ACGCCAACTGCACCCTGATCATCTCTTACCAGAAGC...GCCCACGCCAACTGCACCCTGATCATCTCTTACCAGAAGCCAAAGGAGGTTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370147.5 |
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| CDS-3UTR CCA 90 bp | AATATGACCATGACTCACTGGCTAGGAGTGCCCCATGCCCAGTTCTTAGAGACCTCAGGGGCCAACTACTaGGTCTTGCAGTCCCCATCG | + |
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Preference number: 4 (lower is better) Translates to: NMTMTHWLGVPHAQFLETSGANY*VLQSPS Trigger: CGATGGGGACTGCAAGACCCAGTAGTTGGCCCCTGA...GGTCTCTAAGAACTGGGCATGGGGCACTCCTAGCCAGTGAGTCATGGTCATATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370151.9 |
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| CDS-3UTR CCA 90 bp | CACAACCTCCTTTGGCTTCTGGTAAGAGATGATCAGGGTGCAGTTGGCGTGGGCTCATCCAGAGGTAGCTaGTGTCTATCTCAGAGGGGG | + |
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Preference number: 4 (lower is better) Translates to: HNLLWLLVRDDQGAVGVGSSRGS*CLSQRG Trigger: CCCCCTCTGAGATAGACACCAGCTACCTCTGGATGA...GCCCACGCCAACTGCACCCTGATCATCTCTTACCAGAAGCCAAAGGAGGTTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370147.5 |
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| CDS-3UTR CCA 90 bp | AAGACAGGAGGCTGCCGTGGTCAAGAAGGGCCAAGCCTTGAAGTCTCACGGCACCACCACAACCTCCTTTaGCTTCTGGTAAGAGATGAT | + |
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Preference number: 4 (lower is better) Translates to: KTGGCRGQEGPSLEVSRHHHNLL*LLVRDD Trigger: ATCATCTCTTACCAGAAGCCAAAGGAGGTTGTGGTG...GTGCCGTGAGACTTCAAGGCTTGGCCCTTCTTGACCACGGCAGCCTCCTGTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370151.9 |
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| CDS-3UTR GCA 90 bp | AATATGACCATGACTCACTGGCTAGGAGTGCCCCATGCCCAGTTCTTAGAGACCCCAACTACTGGGTCTTaGAGTCCCCATCGTTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: NMTMTHWLGVPHAQFLETPTTGS*SPHRCC Trigger: ACAGCAACGATGGGGACTGCAAGACCCAGTAGTTGG...GGTCTCTAAGAACTGGGCATGGGGCACTCCTAGCCAGTGAGTCATGGTCATATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370151.9 |
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| CDS-3UTR CCA 90 bp | CACAACCTCCTTTGGCTTCTGGTAAGAGATGATCAGGGTGCAGTTGGCGTGGGCTTTCGAATCCGCCACTaGAAACTCATCTTGGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: HNLLWLLVRDDQGAVGVGFRIRH*KLILVS Trigger: GGACACCAAGATGAGTTTCCAGTGGCGGATTCGAAA...GCCCACGCCAACTGCACCCTGATCATCTCTTACCAGAAGCCAAAGGAGGTTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370147.5 |
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| CDS-3UTR CCA 90 bp | ACTTTACTCAGGAAATATGACCATGACTCACTGGCTAGGAGTGCCCCATGCCCAATGACCATGACTCACTaGCTAGGAGTGCCCCATGCC | + |
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Preference number: 4 (lower is better) Translates to: TLLRKYDHDSLARSAPCPMTMTH*LGVPHA Trigger: GGCATGGGGCACTCCTAGCCAGTGAGTCATGGTCAT...TGGGCATGGGGCACTCCTAGCCAGTGAGTCATGGTCATATTTCCTGAGTAAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370151.9 |
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| CDS-3UTR CCA 90 bp | AACCTCCTTTGGCTTCTGGTAAGAGATGATCAGGGTGCAGTTGGCGTGGGCAAACACCACAACCTCCTTTaGCTTCTGGTAAGAGATGAT | + |
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Preference number: 4 (lower is better) Translates to: NLLWLLVRDDQGAVGVGKHHNLL*LLVRDD Trigger: ATCATCTCTTACCAGAAGCCAAAGGAGGTTGTGGTG...TTTGCCCACGCCAACTGCACCCTGATCATCTCTTACCAGAAGCCAAAGGAGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370147.5 |
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| CDS-3UTR CCA 90 bp | CTCAGGAAATATGACCATGACTCACTGGCTAGGAGTGCCCCATGCCCAGTTCTTTATCTAGATCAGGAATaGAGAACTTCTTGTAGTACT | + |
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Preference number: 4 (lower is better) Translates to: LRKYDHDSLARSAPCPVLYLDQE*RTSCST Trigger: AGTACTACAAGAAGTTCTCCATTCCTGATCTAGATA...AAGAACTGGGCATGGGGCACTCCTAGCCAGTGAGTCATGGTCATATTTCCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370151.9 |
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| CDS GCA 90 bp | AGGAGATGTCCCCTCTCTACCTCCCTGCGAAGAATAAATTCGGGCTaGAGATGCCCCTCGGGCTCCGCAGGGAGGAGCCTCACTCGCCAC | + |
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Preference number: 5 (lower is better) Translates to: RRCPLSTSLRRINSG*RCPSGSAGRSLTRH Trigger: GTGGCGAGTGAGGCTCCTCCCTGCGGAGCCCGAGGGGCATCTGCAGCCCGAATTTATTCTTCGCAGGGAGGTAGAGAGGGGACATCTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000470165.1 |
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| CDS GCA 90 bp | CCAGAGGTAGCTGGTGTCTATCTCAGAGGGGGTGCCATGCACACCTaGACACCGCATGGCCAGAGGGGTCCAGAGAAGCCTCCAACCAGT | + |
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Preference number: 5 (lower is better) Translates to: PEVAGVYLRGGAMHT*TPHGQRGPEKPPTS Trigger: ACTGGTTGGAGGCTTCTCTGGACCCCTCTGGCCATGCGGTGTGCAGGTGTGCATGGCACCCCCTCTGAGATAGACACCAGCTACCTCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370147.5 ENST00000626968.2 |
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| CDS-3UTR CAA 90 bp | GCCGTGGTCAAGAAGGGCCAAGCCTTGAAGTCTCACGGCACCCCCTGTGGTGGATTGCAGTCCCCATCGTaGCTGTGGGCTGTCTTCACC | + |
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Preference number: 5 (lower is better) Translates to: AVVKKGQALKSHGTPCGGLQSPS*LWAVFT Trigger: GGTGAAGACAGCCCACAGCAACGATGGGGACTGCAA...TCCACCACAGGGGGTGCCGTGAGACTTCAAGGCTTGGCCCTTCTTGACCACGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370151.9 |
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| CDS GCA 90 bp | CTTGTGCCCACGGGAGCCTCAGGACCACCAAGCGGAGGGGCGGTCTaGAAGGAGATGTCCCCTCTCTACCTCCCTGCGAAGAATAAATTC | + |
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Preference number: 5 (lower is better) Translates to: LVPTGASGPPSGGAV*KEMSPLYLPAKNKF Trigger: GAATTTATTCTTCGCAGGGAGGTAGAGAGGGGACATCTCCTTGCAGACCGCCCCTCCGCTTGGTGGTCCTGAGGCTCCCGTGGGCACAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000470165.1 |
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| CDS CCA 90 bp | TTCCCTGCTCCTAGGGGCGCTGGGTCTCCTACTTCAAGCTGCCACTaGCCCATGGCTCCCAGGGCACTTTTCACACGCCACTTTCTCACA | + |
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Preference number: 5 (lower is better) Translates to: FPAPRGAGSPTSSCH*PMAPRALFTRHFLT Trigger: TGTGAGAAAGTGGCGTGTGAAAAGTGCCCTGGGAGCCATGGGCCAGTGGCAGCTTGAAGTAGGAGACCCAGCGCCCCTAGGAGCAGGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000370147.5 ENST00000370151.9 ENST00000434727.1 ENST00000626968.2 |
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| CDS CCA 90 bp | GGTCAAGAAGGGCCAAGCCTTGAAGTCTCACGGCACCCCCTGTGGTaGAGGTATAAGGCTCAGGGGCCAACTACTGGGTCTTGCAGTCCC | + |
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Preference number: 5 (lower is better) Translates to: GQEGPSLEVSRHPLW*RYKAQGPTTGSCSP Trigger: GGGACTGCAAGACCCAGTAGTTGGCCCCTGAGCCTTATACCTCCACCACAGGGGGTGCCGTGAGACTTCAAGGCTTGGCCCTTCTTGACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370151.9 ENST00000475443.1 |
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| CDS CCA 90 bp | TGGTGTCTATCTCAGAGGGGGTGCCATGCACACCTGCACACCGCATaGCCAGAGGGGTCCAGAGAAGCCTCCAACCAGTCCGCTTCTTGT | + |
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Preference number: 5 (lower is better) Translates to: WCLSQRGCHAHLHTA*PEGSREASNQSASC Trigger: ACAAGAAGCGGACTGGTTGGAGGCTTCTCTGGACCCCTCTGGCCATGCGGTGTGCAGGTGTGCATGGCACCCCCTCTGAGATAGACACCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370147.5 ENST00000626968.2 |
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| CDS CCA 90 bp | CAGTTGGCGTGGGCAAAGCTCAGCAAGGCGTCATCCAGAGGTAGCTaGTGTCTATCTCAGAGGGGGTGCCATGCACACCTGCACACCGCA | + |
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Preference number: 5 (lower is better) Translates to: QLAWAKLSKASSRGS*CLSQRGCHAHLHTA Trigger: TGCGGTGTGCAGGTGTGCATGGCACCCCCTCTGAGATAGACACCAGCTACCTCTGGATGACGCCTTGCTGAGCTTTGCCCACGCCAACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370147.5 |
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| CDS TCA 90 bp | ATTCCCAGATGGCCGGTCCCACCGGGGTATCTTCAGCCGCCTCCTTaGCAGTCTTCGGCAGGAAGGTATAAGCTCCATCTCTGGGTGAGC | + |
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Preference number: 5 (lower is better) Translates to: IPRWPVPPGYLQPPP*QSSAGRYKLHLWVS Trigger: GCTCACCCAGAGATGGAGCTTATACCTTCCTGCCGAAGACTGTCAAGGAGGCGGCTGAAGATACCCCGGTGGGACCGGCCATCTGGGAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470165.1 |
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| CDS CCA 90 bp | CGTGGTCAAGAAGGGCCAAGCCTTGAAGTCTCACGGCACCCCCTGTaGTGGAGGTATAAGGCTCAGGGGCCAACTACTGGGTCTTGCAGT | + |
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Preference number: 5 (lower is better) Translates to: RGQEGPSLEVSRHPL*WRYKAQGPTTGSCS Trigger: ACTGCAAGACCCAGTAGTTGGCCCCTGAGCCTTATACCTCCACCACAGGGGGTGCCGTGAGACTTCAAGGCTTGGCCCTTCTTGACCACG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370151.9 ENST00000475443.1 |
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| CDS-3UTR CAA 90 bp | CAAGAAGGGCCAAGCCTTGAAGTCTCACGGCACCCCCTGTGGTGGAGGTATAAGAAGAAGGGCCAAGCCTaGAAGTCTCACGGCACCCCC | + |
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Preference number: 5 (lower is better) Translates to: QEGPSLEVSRHPLWWRYKKKGQA*KSHGTP Trigger: GGGGGTGCCGTGAGACTTCAAGGCTTGGCCCTTCTT...CTTATACCTCCACCACAGGGGGTGCCGTGAGACTTCAAGGCTTGGCCCTTCTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370151.9 |
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| CDS GCA 90 bp | TCCATAGGCAAAGGGGTTGGAGGGCCTCAATTCTGGATTTCCACGTaGAGCAGCCCTGACCAACGCTCCAATAGGCCGGGATCCAGCCAT | + |
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Preference number: 5 (lower is better) Translates to: SIGKGVGGPQFWIST*SSPDQRSNRPGSSH Trigger: ATGGCTGGATCCCGGCCTATTGGAGCGTTGGTCAGGGCTGCTGCACGTGGAAATCCAGAATTGAGGCCCTCCAACCCCTTTGCCTATGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470165.1 |
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| CDS CCA 90 bp | CTTCCTTCTCCCTCCATAGGCAAAGGGGTTGGAGGGCCTCAATTCTaGATTTCCACGTGCAGCAGCCCTGACCAACGCTCCAATAGGCCG | + |
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Preference number: 5 (lower is better) Translates to: LPSPSIGKGVGGPQF*ISTCSSPDQRSNRP Trigger: CGGCCTATTGGAGCGTTGGTCAGGGCTGCTGCACGTGGAAATCCAGAATTGAGGCCCTCCAACCCCTTTGCCTATGGAGGGAGAAGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470165.1 |
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| CDS-3UTR CAA 90 bp | GCCGTGGTCAAGAAGGGCCAAGCCTTGAAGTCTCACGGCACCCCCTGTGGTGGACACTGGAAACTCATCTaGGTGTCCTTGCGCATGAAG | + |
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Preference number: 5 (lower is better) Translates to: AVVKKGQALKSHGTPCGGHWKLI*VSLRMK Trigger: CTTCATGCGCAAGGACACCAAGATGAGTTTCCAGTG...TCCACCACAGGGGGTGCCGTGAGACTTCAAGGCTTGGCCCTTCTTGACCACGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370151.9 |
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| CDS-3UTR CAA 90 bp | AACCTCCTTTGGCTTCTGGTAAGAGATGATCAGGGTGCAGTTGGCGTGGGCAAAATGATCAGGGTGCAGTaGGCGTGGGCAAAGCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: NLLWLLVRDDQGAVGVGKMIRVQ*AWAKLS Trigger: GCTGAGCTTTGCCCACGCCAACTGCACCCTGATCAT...TTTGCCCACGCCAACTGCACCCTGATCATCTCTTACCAGAAGCCAAAGGAGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370147.5 |
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| CDS-3UTR CAA 90 bp | CTCAGGAAATATGACCATGACTCACTGGCTAGGAGTGCCCCATGCCCAGTTCTTATGATCAGGGTGCAGTaGGCGTGGGCAAAGCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: LRKYDHDSLARSAPCPVLMIRVQ*AWAKLS Trigger: GCTGAGCTTTGCCCACGCCAACTGCACCCTGATCAT...AAGAACTGGGCATGGGGCACTCCTAGCCAGTGAGTCATGGTCATATTTCCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370151.9 |
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| CDS CCA 90 bp | GAAGTCTGGGTGAATCTTACAGAGATGATCAGGGTGCAGTTGGCGTaGGCAAAGCTCAGCAAGGCGTCATCCAGAGGTAGCTGGTGTCTA | + |
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Preference number: 5 (lower is better) Translates to: EVWVNLTEMIRVQLA*AKLSKASSRGSWCL Trigger: TAGACACCAGCTACCTCTGGATGACGCCTTGCTGAGCTTTGCCCACGCCAACTGCACCCTGATCATCTCTGTAAGATTCACCCAGACTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000475443.1 |
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| CDS-3UTR CAA 90 bp | ATGACTCACTGGCTAGGAGTGCCCCATGCCCAGTTCTTAGAGACCCTTGATAGCTTGGCATTGCTTTCCTaGATGAGTTCAGGCCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: MTHWLGVPHAQFLETLDSLALLS*MSSGPR Trigger: CCTGGGGCCTGAACTCATCAAGGAAAGCAATGCCAA...GCTATCAAGGGTCTCTAAGAACTGGGCATGGGGCACTCCTAGCCAGTGAGTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370151.9 |
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| CDS GCA 90 bp | TATAAGGCTCAGGGGCCAACTACTGGGTCTTGCAGTCCCCATCGTTaGTGTGGGCTGTCTTCACCTTCTTTAGTTCCTTCTGTAGCTCAG | + |
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Preference number: 5 (lower is better) Translates to: YKAQGPTTGSCSPHR*CGLSSPSLVPSVAQ Trigger: CTGAGCTACAGAAGGAACTAAAGAAGGTGAAGACAGCCCACAGCAACGATGGGGACTGCAAGACCCAGTAGTTGGCCCCTGAGCCTTATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370151.9 ENST00000475443.1 |
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| CDS-3UTR CAA 90 bp | AACCTCCTTTGGCTTCTGGTAAGAGATGATCAGGGTGCAGTTGGCGTGGGCAAATTGGCATTGCTTTCCTaGATGAGTTCAGGCCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: NLLWLLVRDDQGAVGVGKLALLS*MSSGPR Trigger: CCTGGGGCCTGAACTCATCAAGGAAAGCAATGCCAA...TTTGCCCACGCCAACTGCACCCTGATCATCTCTTACCAGAAGCCAAAGGAGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370147.5 |
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| CDS-3UTR CAA 90 bp | CACAACCTCCTTTGGCTTCTGGTAAGAGATGATCAGGGTGCAGTTGGCGTGGGCCAACCAGTCCGCTTCTaGTTGGTTGTTCTGACAATG | + |
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Preference number: 5 (lower is better) Translates to: HNLLWLLVRDDQGAVGVGQPVRF*LVVLTM Trigger: CATTGTCAGAACAACCAACAAGAAGCGGACTGGTTG...GCCCACGCCAACTGCACCCTGATCATCTCTTACCAGAAGCCAAAGGAGGTTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370147.5 |
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| CDS-3UTR CAA 90 bp | AACCTCCTTTGGCTTCTGGTAAGAGATGATCAGGGTGCAGTTGGCGTGGGCAAACACTGGAAACTCATCTaGGTGTCCTTGCGCATGAAG | + |
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Preference number: 5 (lower is better) Translates to: NLLWLLVRDDQGAVGVGKHWKLI*VSLRMK Trigger: CTTCATGCGCAAGGACACCAAGATGAGTTTCCAGTG...TTTGCCCACGCCAACTGCACCCTGATCATCTCTTACCAGAAGCCAAAGGAGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370147.5 |
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| CDS-3UTR CAA 90 bp | AACCTCCTTTGGCTTCTGGTAAGAGATGATCAGGGTGCAGTTGGCGTGGGCAAACCAGTCCGCTTCTTGTaGGTTGTTCTGACAATGATG | + |
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Preference number: 5 (lower is better) Translates to: NLLWLLVRDDQGAVGVGKPVRFL*VVLTMM Trigger: CATCATTGTCAGAACAACCAACAAGAAGCGGACTGG...TTTGCCCACGCCAACTGCACCCTGATCATCTCTTACCAGAAGCCAAAGGAGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370147.5 |
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| CDS-3UTR CAA 90 bp | AACCTCCTTTGGCTTCTGGTAAGAGATGATCAGGGTGCAGTTGGCGTGGGCAAACGCATGAAGATAGGATaGGCATTGCTTTCCTTGATG | + |
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Preference number: 5 (lower is better) Translates to: NLLWLLVRDDQGAVGVGKRMKIG*ALLSLM Trigger: CATCAAGGAAAGCAATGCCAATCCTATCTTCATGCG...TTTGCCCACGCCAACTGCACCCTGATCATCTCTTACCAGAAGCCAAAGGAGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370147.5 |
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| CDS-3UTR CAA 90 bp | AACCTCCTTTGGCTTCTGGTAAGAGATGATCAGGGTGCAGTTGGCGTGGGCAAAAAGATAGGATTGGCATaGCTTTCCTTGATGAGTTCA | + |
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Preference number: 5 (lower is better) Translates to: NLLWLLVRDDQGAVGVGKKIGLA*LSLMSS Trigger: TGAACTCATCAAGGAAAGCAATGCCAATCCTATCTT...TTTGCCCACGCCAACTGCACCCTGATCATCTCTTACCAGAAGCCAAAGGAGGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370147.5 |
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| CDS-3UTR CAA 90 bp | AATATGACCATGACTCACTGGCTAGGAGTGCCCCATGCCCAGTTCTTAGAGACCAAGATAGGATTGGCATaGCTTTCCTTGATGAGTTCA | + |
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Preference number: 5 (lower is better) Translates to: NMTMTHWLGVPHAQFLETKIGLA*LSLMSS Trigger: TGAACTCATCAAGGAAAGCAATGCCAATCCTATCTT...GGTCTCTAAGAACTGGGCATGGGGCACTCCTAGCCAGTGAGTCATGGTCATATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370151.9 |
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| CDS GCA 72 bp | ACGGGAGCCTCAGGACCACCAAGCGGAGGGGCGGTCTaGAAGGAGATGTCCCCTCTCTACCTCCCTGCGAAG | + |
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Preference number: 6 (lower is better) Translates to: TGASGPPSGGAV*KEMSPLYLPAK Trigger: CTTCGCAGGGAGGTAGAGAGGGGACATCTCCTTGCAGACCGCCCCTCCGCTTGGTGGTCCTGAGGCTCCCGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000470165.1 |
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| CDS CCA 72 bp | CTCTCTATCGGGGCCGGAATCCTCTCCAGGGAGAGATaGAACAGCCCCGCCACACCTTGTGCCCACGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: LSIGAGILSRER*NSPATPCAHGS Trigger: GCTCCCGTGGGCACAAGGTGTGGCGGGGCTGTTCCATCTCTCCCTGGAGAGGATTCCGGCCCCGATAGAGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000470165.1 |
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| CDS CCA 72 bp | TCTCAGAGGGGGTGCCATGCACACCTGCACACCGCATaGCCAGAGGGGTCCAGAGAAGCCTCCAACCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: SQRGCHAHLHTA*PEGSREASNQS Trigger: GGACTGGTTGGAGGCTTCTCTGGACCCCTCTGGCCATGCGGTGTGCAGGTGTGCATGGCACCCCCTCTGAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370147.5 ENST00000626968.2 |
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| CDS GCA 72 bp | GCTGGTGTCTATCTCAGAGGGGGTGCCATGCACACCTaGACACCGCATGGCCAGAGGGGTCCAGAGAAGCCT | + |
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Preference number: 6 (lower is better) Translates to: AGVYLRGGAMHT*TPHGQRGPEKP Trigger: AGGCTTCTCTGGACCCCTCTGGCCATGCGGTGTGCAGGTGTGCATGGCACCCCCTCTGAGATAGACACCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370147.5 ENST00000626968.2 |
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| CDS GCA 72 bp | TCATCCAGAGGTAGCTGGTGTCTATCTCAGAGGGGGTaGCATGCACACCTGCACACCGCATGGCCAGAGGGG | + |
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Preference number: 6 (lower is better) Translates to: SSRGSWCLSQRG*HAHLHTAWPEG Trigger: CCCCTCTGGCCATGCGGTGTGCAGGTGTGCATGGCACCCCCTCTGAGATAGACACCAGCTACCTCTGGATGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000370147.5 ENST00000626968.2 |
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| CDS GCA 72 bp | GGGAGGAGCCTCACTCGCCACTCTAGCTTCAGGCTCTaGCTTCCTGATCCTAACACCCTCCACCCTCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: GRSLTRHSSFRL*LPDPNTLHPLG Trigger: TCCCAGAGGGTGGAGGGTGTTAGGATCAGGAAGGCAGAGCCTGAAGCTAGAGTGGCGAGTGAGGCTCCTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000470165.1 |
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| CDS CCA 72 bp | GAAGGGCCAAGCCTTGAAGTCTCACGGCACCCCCTGTaGTGGAGGTATAAGGCTCAGGGGCCAACTACTGGG | + |
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Preference number: 6 (lower is better) Translates to: EGPSLEVSRHPL*WRYKAQGPTTG Trigger: CCCAGTAGTTGGCCCCTGAGCCTTATACCTCCACCACAGGGGGTGCCGTGAGACTTCAAGGCTTGGCCCTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370151.9 ENST00000475443.1 |
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| CDS TCA 72 bp | TGGCCGGTCCCACCGGGGTATCTTCAGCCGCCTCCTTaGCAGTCTTCGGCAGGAAGGTATAAGCTCCATCTC | + |
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Preference number: 6 (lower is better) Translates to: WPVPPGYLQPPP*QSSAGRYKLHL Trigger: GAGATGGAGCTTATACCTTCCTGCCGAAGACTGTCAAGGAGGCGGCTGAAGATACCCCGGTGGGACCGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470165.1 |
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| CDS CCA 72 bp | CCCTCCATAGGCAAAGGGGTTGGAGGGCCTCAATTCTaGATTTCCACGTGCAGCAGCCCTGACCAACGCTCC | + |
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Preference number: 6 (lower is better) Translates to: PSIGKGVGGPQF*ISTCSSPDQRS Trigger: GGAGCGTTGGTCAGGGCTGCTGCACGTGGAAATCCAGAATTGAGGCCCTCCAACCCCTTTGCCTATGGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470165.1 |
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| CDS GCA 72 bp | AAAGGGGTTGGAGGGCCTCAATTCTGGATTTCCACGTaGAGCAGCCCTGACCAACGCTCCAATAGGCCGGGA | + |
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Preference number: 6 (lower is better) Translates to: KGVGGPQFWIST*SSPDQRSNRPG Trigger: TCCCGGCCTATTGGAGCGTTGGTCAGGGCTGCTGCACGTGGAAATCCAGAATTGAGGCCCTCCAACCCCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470165.1 |
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| CDS CCA 72 bp | TGGGCAAAGCTCAGCAAGGCGTCATCCAGAGGTAGCTaGTGTCTATCTCAGAGGGGGTGCCATGCACACCTG | + |
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Preference number: 6 (lower is better) Translates to: WAKLSKASSRGS*CLSQRGCHAHL Trigger: CAGGTGTGCATGGCACCCCCTCTGAGATAGACACCAGCTACCTCTGGATGACGCCTTGCTGAGCTTTGCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370147.5 |
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| CDS GCA 72 bp | TGGAGGTATAAGGCTCAGGGGCCAACTACTGGGTCTTaGAGTCCCCATCGTTGCTGTGGGCTGTCTTCACCT | + |
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Preference number: 6 (lower is better) Translates to: WRYKAQGPTTGS*SPHRCCGLSSP Trigger: AGGTGAAGACAGCCCACAGCAACGATGGGGACTGCAAGACCCAGTAGTTGGCCCCTGAGCCTTATACCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370151.9 ENST00000475443.1 |
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| CDS CAA 90 bp | GTCCAAGAAGTCTGGGTGAATCTTACAGAGATGATCAGGGTGCAGTaGGCGTGGGCAAAGCTCAGCAAGGCGTCATCCAGAGGTAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: VQEVWVNLTEMIRVQ*AWAKLSKASSRGSW Trigger: CCAGCTACCTCTGGATGACGCCTTGCTGAGCTTTGCCCACGCCAACTGCACCCTGATCATCTCTGTAAGATTCACCCAGACTTCTTGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000475443.1 |
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| CDS GCA 72 bp | CAGGGGCCAACTACTGGGTCTTGCAGTCCCCATCGTTaGTGTGGGCTGTCTTCACCTTCTTTAGTTCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: QGPTTGSCSPHR*CGLSSPSLVPS Trigger: AGAAGGAACTAAAGAAGGTGAAGACAGCCCACAGCAACGATGGGGACTGCAAGACCCAGTAGTTGGCCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370151.9 ENST00000475443.1 |
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| CDS CAA 72 bp | TCAGGGGCCAACTACTGGGTCTTGCAGTCCCCATCGTaGCTGTGGGCTGTCTTCACCTTCTTTAGTTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: SGANYWVLQSPS*LWAVFTFFSSF Trigger: GAAGGAACTAAAGAAGGTGAAGACAGCCCACAGCAACGATGGGGACTGCAAGACCCAGTAGTTGGCCCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370151.9 ENST00000475443.1 |
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| CDS CCA 72 bp | TGGGCAAAGCTCAGCAAGGCGTCATCCAGAGGTAGCTaGTGTCTATCTAGATCAGGAATGGAGAACTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: WAKLSKASSRGS*CLSRSGMENFL Trigger: CAAGAAGTTCTCCATTCCTGATCTAGATAGACACCAGCTACCTCTGGATGACGCCTTGCTGAGCTTTGCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370151.9 |
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| CDS CAA 72 bp | TTTCGAATCCGCCACTGGAAACTCATCTTGGTGTCCTaGCGCATGAAGATAGGATTGGCATTGCTTTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: FRIRHWKLILVS*RMKIGLALLSL Trigger: CAAGGAAAGCAATGCCAATCCTATCTTCATGCGCAAGGACACCAAGATGAGTTTCCAGTGGCGGATTCGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000370147.5 ENST00000370151.9 ENST00000434727.1 ENST00000475443.1 ENST00000626968.2 |
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