RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DPAGT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000172269

Ensembl transcript IDs: ENST00000354202.9, ENST00000392834.7, ENST00000409993.6, ENST00000414373.5, ENST00000442480.1, ENST00000445653.6, ENST00000460183.1, ENST00000461999.1, ENST00000472016.1, ENST00000481084.5, ENST00000524658.2, ENST00000525456.5, ENST00000530052.2, ENST00000533687.1, ENST00000636404.1, ENST00000638850.1, ENST00000639704.1, ENST00000640102.1, ENST00000640747.1, ENST00000682191.1, ENST00000682192.1, ENST00000682232.1, ENST00000682326.1, ENST00000682404.1, ENST00000682517.1, ENST00000682652.1, ENST00000682665.1, ENST00000682691.1, ENST00000682791.1, ENST00000682811.1, ENST00000682883.1, ENST00000682946.1, ENST00000683143.1, ENST00000683373.1, ENST00000683558.1, ENST00000683567.1, ENST00000683955.1, ENST00000684142.1, ENST00000684252.1, ENST00000684255.1, ENST00000684315.1, ENST00000684345.1, ENST00000684499.1, ENST00000684682.1

Found 681 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCAGCGCAGATTCAGTACATCATCCGCAAAGCCCAGGAAGATCATaGAGCAGATGGCAAGGAGGGCACCTATCAGGGCCACAAACTGGG +
Preference number: 1 (lower is better)
Translates to: ASADSVHHPQSPGRS*SRWQGGHLSGPQTG
Trigger: CCCAGTTTGTGGCCCTGATAGGTGCCCTCCTTGCCATCTGCTGCATGATCTTCCTGGGCTTTGCGGATGATGTACTGAATCTGCGCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414373.5
3UTR CCA 90 bp ACCATGAGGAGAGGTAGTGAGGCAGCTGTAGGTAGCAGCAGCTTATaGCGCCAGCGCAGATTCAGTACATCATCCGCAAAGCCCAGGAAG +
Preference number: 1 (lower is better)
Translates to: TMRRGSEAAVGSSSL*RQRRFSTSSAKPRK
Trigger: CTTCCTGGGCTTTGCGGATGATGTACTGAATCTGCGCTGGCGCCATAAGCTGCTGCTACCTACAGCTGCCTCACTACCTCTCCTCATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640747.1
3UTR CCA 90 bp GTCATGTTGTTACATTCAGTGAATTCACCATCTTCAGTCTCACTCTaGTGTACTGTCACCAGCTGGAGGCTCTCTGCCACCAGTTGTGGT +
Preference number: 1 (lower is better)
Translates to: VMLLHSVNSPSSVSL*CTVTSWRLSATSCG
Trigger: ACCACAACTGGTGGCAGAGAGCCTCCAGCTGGTGACAGTACACCAGAGTGAGACTGAAGATGGTGAATTCACTGAATGTAACAACATGAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414373.5
3UTR CCA 90 bp TCTACCAGGTTGAAGACAATGATGGAAGCAGAAATGACTAGTGACTaGCCAGCCTCTAGGCCGTTAATTCCTGCTAGGATATTGATGGCA +
Preference number: 1 (lower is better)
Translates to: STRLKTMMEAEMTSD*PASRPLIPARILMA
Trigger: TGCCATCAATATCCTAGCAGGAATTAACGGCCTAGAGGCTGGCCAGTCACTAGTCATTTCTGCTTCCATCATTGTCTTCAACCTGGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
3UTR CCA 90 bp GTCATGTTGTTACATTCAGTGAATTCACCATCTTCAGTCTCACTCTaGTGTACTGTCACCAGCTGGAGGCTCTCTGCCACCTTTAAAATA +
Preference number: 1 (lower is better)
Translates to: VMLLHSVNSPSSVSL*CTVTSWRLSATFKI
Trigger: TATTTTAAAGGTGGCAGAGAGCCTCCAGCTGGTGACAGTACACCAGAGTGAGACTGAAGATGGTGAATTCACTGAATGTAACAACATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000442480.1
ENST00000640102.1
ENST00000640747.1
3UTR-3UTR CCA 90 bp GTACAGGATTCCCAAGTCCAGATGCAGGCCAAGTATCGGGCGGAAGGGCTTGGGGGTAGCAGCAGCTTATaGCGCCAGCGCAGATTCAGT +
Preference number: 2 (lower is better)
Translates to: VQDSQVQMQAKYRAEGLGGSSSL*RQRRFS
Trigger: ACTGAATCTGCGCTGGCGCCATAAGCTGCTGCTACC...CCCAAGCCCTTCCGCCCGATACTTGGCCTGCATCTGGACTTGGGAATCCTGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
3UTR-3UTR TCA 90 bp AGTACAGGATTCCCAAGTCCAGATGCAGGCCAAGTATCGGGCGGAAGGGCTTGGAGAGAGAGGTCAGCCTaGGTCAGGAATCCTAGAGAC +
Preference number: 2 (lower is better)
Translates to: STGFPSPDAGQVSGGRAWRERSA*VRNPRD
Trigger: GTCTCTAGGATTCCTGACTCAGGCTGACCTCTCTCT...CCAAGCCCTTCCGCCCGATACTTGGCCTGCATCTGGACTTGGGAATCCTGTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640747.1
3UTR-3UTR CCA 90 bp GAAGAGTCGAACGAGCTGATATCGAATGGAGAAGGTGATGGCACTGCCCAGGATTCGGGCGGAAGGGCTTaGGCACCACAATGGTCGTGT +
Preference number: 2 (lower is better)
Translates to: EESNELISNGEGDGTAQDSGGRA*APQWSC
Trigger: ACACGACCATTGTGGTGCCCAAGCCCTTCCGCCCGA...ATCCTGGGCAGTGCCATCACCTTCTCCATTCGATATCAGCTCGTTCGACTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640747.1
3UTR-3UTR CCA 90 bp CGGCAAAGGTCATGCCAGCAAAGTAACAGAAGGTATCTCCCACAAACACCCGTGTCGGGCGGAAGGGCTTaGGCACCACAATGGTCGTGT +
Preference number: 2 (lower is better)
Translates to: RQRSCQQSNRRYLPQTPVSGGRA*APQWSC
Trigger: ACACGACCATTGTGGTGCCCAAGCCCTTCCGCCCGA...CACGGGTGTTTGTGGGAGATACCTTCTGTTACTTTGCTGGCATGACCTTTGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000640102.1
ENST00000640747.1
3UTR-3UTR TCA 90 bp GCTGTATCCCACCCTATGAGGCTGCAAAGATGGGATGGAGAGGGAGAGAGTAGCCTGTATCCCACCCTATaGGGCTGCAAAGATGGGATG +
Preference number: 2 (lower is better)
Translates to: AVSHPMRLQRWDGEGESSLYPTL*GCKDGM
Trigger: CATCCCATCTTTGCAGCCTCATAGGGTGGGATACAG...GCTACTCTCTCCCTCTCCATCCCATCTTTGCAGCCTCATAGGGTGGGATACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
3UTR-3UTR CCA 90 bp CAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCACAGAGGGTAGCAGCAGCTTATaGCGCCAGCGCAGATTCAGT +
Preference number: 2 (lower is better)
Translates to: QSVVSRGQETPRMPMITEGSSSL*RQRRFS
Trigger: ACTGAATCTGCGCTGGCGCCATAAGCTGCTGCTACC...CTCTGTGATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640747.1
3UTR-3UTR CCA 90 bp GCCTCTAGGCCGTTAATTCCTGCTAGGATATTGATGGCATTGGTACAGAACACTATCAGGGCCACAAACTaGGGGAGGCTCGGGCAGGTC +
Preference number: 2 (lower is better)
Translates to: ASRPLIPARILMALVQNTIRATN*GRLGQV
Trigger: GACCTGCCCGAGCCTCCCCCAGTTTGTGGCCCTGAT...AGTGTTCTGTACCAATGCCATCAATATCCTAGCAGGAATTAACGGCCTAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414373.5
3UTR-3UTR TCA 90 bp TCGAACGAGCTGATATCGAATGGAGAAGGTGATGGCACTGCCCAGGATCTGCAGGCAGCAGGAGCAATGTaGGGTTTCTCTCATGTATGG +
Preference number: 2 (lower is better)
Translates to: SNELISNGEGDGTAQDLQAAGAM*GFSHVW
Trigger: CCATACATGAGAGAAACCTCACATTGCTCCTGCTGC...CTGCAGATCCTGGGCAGTGCCATCACCTTCTCCATTCGATATCAGCTCGTTCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000442480.1
ENST00000638850.1
ENST00000640747.1
3UTR-3UTR GCA 90 bp AACAGAAGGTATCTCCCACAAACACCCGTGATGGGTACCAGTTGTGGTAGAGCAATTCCCAAGTCCAGATaGAGGCCAAGTATCGGGCGG +
Preference number: 2 (lower is better)
Translates to: NRRYLPQTPVMGTSCGRAIPKSR*RPSIGR
Trigger: CCGCCCGATACTTGGCCTGCATCTGGACTTGGGAAT...TGCTCTACCACAACTGGTACCCATCACGGGTGTTTGTGGGAGATACCTTCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000640102.1
ENST00000640747.1
3UTR-3UTR CCA 90 bp ATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAGGCAAGGAGGCAGTCTaGGACCAGAGAGAGAGGTCA +
Preference number: 2 (lower is better)
Translates to: IGKIQSVVSRGQETPRMPGKEAV*DQRERS
Trigger: TGACCTCTCTCTCTGGTCCCAGACTGCCTCCTTGCC...TGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTTACCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
3UTR-3UTR CCA 90 bp AAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCGGCAAGGAGGCAGTCTaGGACCAGAGAGAGAGGTCA +
Preference number: 2 (lower is better)
Translates to: KIQSVVSRGQETPRMPMIGKEAV*DQRERS
Trigger: TGACCTCTCTCTCTGGTCCCAGACTGCCTCCTTGCC...GATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
3UTR-3UTR TCA 90 bp ATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCACAGAGAAAGAGAGAGGTCAGCCTaGGTCAGGAATCCTAGAGAC +
Preference number: 2 (lower is better)
Translates to: ISSQQRARNAQDANDHRERERSA*VRNPRD
Trigger: GTCTCTAGGATTCCTGACTCAGGCTGACCTCTCTCT...TTCTCTGTGATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
3UTR-3UTR TCA 90 bp GTTCCTAGCCCTGGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAAATCTGGAGGAGTATaGAGAGTGAGAGAGGCCTGG +
Preference number: 2 (lower is better)
Translates to: VPSPGPSSIPKTSGSLRVKSGGV*RVREAW
Trigger: CCAGGCCTCTCTCACTCTTCATACTCCTCCAGATTT...GACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCCAGGGCTAGGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
3UTR-3UTR TCA 90 bp CAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCACAGAGAAATCTGGAGGAGTATaGAGAGTGAGAGAGGCCTGG +
Preference number: 2 (lower is better)
Translates to: QSVVSRGQETPRMPMITEKSGGV*RVREAW
Trigger: CCAGGCCTCTCTCACTCTTCATACTCCTCCAGATTT...CTCTGTGATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
3UTR-3UTR TCA 90 bp ATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCACAGAGAACTTTATTGTCTCCATTaGGAGCATGTGGCCCCCTGC +
Preference number: 2 (lower is better)
Translates to: ISSQQRARNAQDANDHRELYCLH*EHVAPC
Trigger: GCAGGGGGCCACATGCTCTCAATGGAGACAATAAAG...TTCTCTGTGATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
3UTR-3UTR CCA 90 bp CCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAATGGGCAAGGAGGCAGTCTaGGACCAGAGAGAGAGGTCA +
Preference number: 2 (lower is better)
Translates to: PKFYPKNQWFLESQDSEMGKEAV*DQRERS
Trigger: TGACCTCTCTCTCTGGTCCCAGACTGCCTCCTTGCC...CATTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
3UTR-3UTR CCA 90 bp GGCCCAAGGACTTTAAGTAGCAAGTTGATGAGGGTCATGTTGTTACATTCAGTGTCGGGCGGAAGGGCTTaGGCACCACAATGGTCGTGT +
Preference number: 2 (lower is better)
Translates to: GPRTLSSKLMRVMLLHSVSGGRA*APQWSC
Trigger: ACACGACCATTGTGGTGCCCAAGCCCTTCCGCCCGA...CACTGAATGTAACAACATGACCCTCATCAACTTGCTACTTAAAGTCCTTGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
3UTR-3UTR CCA 90 bp GTCCCAAGATGCCCACCACGGCAAAGGTCATGCCAGCAAAGTAACAGAAGGTATGAAATGACTAGTGACTaGCCAGCCTCTAGGCCGTTA +
Preference number: 2 (lower is better)
Translates to: VPRCPPRQRSCQQSNRRYEMTSD*PASRPL
Trigger: TAACGGCCTAGAGGCTGGCCAGTCACTAGTCATTTC...ATACCTTCTGTTACTTTGCTGGCATGACCTTTGCCGTGGTGGGCATCTTGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000640102.1
ENST00000640747.1
3UTR-3UTR TCA 90 bp GGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAAAGAGAGAGGTCAGCCTaGGTCAGGAATCCTAGAGAC +
Preference number: 2 (lower is better)
Translates to: GPSSIPKTSGSLRVRTLKRERSA*VRNPRD
Trigger: GTCTCTAGGATTCCTGACTCAGGCTGACCTCTCTCT...TTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
3UTR-3UTR TCA 90 bp ATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCACAGAGAAAAATCTGGAGGAGTATaGAGAGTGAGAGAGGCCTGG +
Preference number: 2 (lower is better)
Translates to: ISSQQRARNAQDANDHREKSGGV*RVREAW
Trigger: CCAGGCCTCTCTCACTCTTCATACTCCTCCAGATTT...TTCTCTGTGATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
3UTR-3UTR GCA 90 bp CAAGATGCCCACCACGGCAAAGGTCATGCCAGCAAAGTAACAGAAGGTATCTCCGAGCATGTGGCCCCCTaGTTAGTTCTTACTAATCAG +
Preference number: 2 (lower is better)
Translates to: QDAHHGKGHASKVTEGISEHVAP*LVLTNQ
Trigger: CTGATTAGTAAGAACTAAGCAGGGGGCCACATGCTC...GGAGATACCTTCTGTTACTTTGCTGGCATGACCTTTGCCGTGGTGGGCATCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392834.7
3UTR-3UTR GCA 90 bp TCAGACATCATAGAAGAGTCGAACGAGCTGATATCGAATGGAGAAGGTGATGGCATTCCCAAGTCCAGATaGAGGCCAAGTATCGGGCGG +
Preference number: 2 (lower is better)
Translates to: SDIIEESNELISNGEGDGIPKSR*RPSIGR
Trigger: CCGCCCGATACTTGGCCTGCATCTGGACTTGGGAAT...GCCATCACCTTCTCCATTCGATATCAGCTCGTTCGACTCTTCTATGATGTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640747.1
3UTR-3UTR CCA 90 bp AGGACAATGATCAAGGGACTCAGACATCATAGAAGAGTCGAACGAGCTGATATCGGCAAGGAGGCAGTCTaGGACCAGAGAGAGAGGTCA +
Preference number: 2 (lower is better)
Translates to: RTMIKGLRHHRRVERADIGKEAV*DQRERS
Trigger: TGACCTCTCTCTCTGGTCCCAGACTGCCTCCTTGCC...GATATCAGCTCGTTCGACTCTTCTATGATGTCTGAGTCCCTTGATCATTGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000640747.1
3UTR-3UTR CCA 90 bp AAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCGCTTGGGCACCACAATaGTCGTGTTGCCAAAGTTGG +
Preference number: 2 (lower is better)
Translates to: KIQSVVSRGQETPRMPMIAWAPQ*SCCQSW
Trigger: CCAACTTTGGCAACACGACCATTGTGGTGCCCAAGC...GATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640747.1
3UTR-3UTR TCA 90 bp GCCTCTAGGCCGTTAATTCCTGCTAGGATATTGATGGCATTGGTACAGAACACTAGAGAGAGGTCAGCCTaGGTCAGGAATCCTAGAGAC +
Preference number: 2 (lower is better)
Translates to: ASRPLIPARILMALVQNTRERSA*VRNPRD
Trigger: GTCTCTAGGATTCCTGACTCAGGCTGACCTCTCTCT...AGTGTTCTGTACCAATGCCATCAATATCCTAGCAGGAATTAACGGCCTAGAGGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640747.1
3UTR-3UTR TCA 90 bp CCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAATGCTGTATCCCACCCTATaGGGCTGCAAAGATGGGATG +
Preference number: 2 (lower is better)
Translates to: PKFYPKNQWFLESQDSEMLYPTL*GCKDGM
Trigger: CATCCCATCTTTGCAGCCTCATAGGGTGGGATACAG...CATTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
3UTR-3UTR TCA 90 bp AGGAGCAATGTGAGGTTTCTCTCATGTATGGGCCCAAGGACTTTAAGTAGCAAGGTAGCATGGTCTTGCTaGAGTGTCCCAAGATGCCCA +
Preference number: 2 (lower is better)
Translates to: RSNVRFLSCMGPRTLSSKVAWSC*SVPRCP
Trigger: TGGGCATCTTGGGACACTTCAGCAAGACCATGCTAC...CTTGCTACTTAAAGTCCTTGGGCCCATACATGAGAGAAACCTCACATTGCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000640102.1
ENST00000640747.1
3UTR-3UTR GCA 90 bp AAGACAATGATGGAAGCAGAAATGACTAGTGACTGGCCAGCCTCTAGGCCGTTAATTGGTACAGAACACTaGCAGCAGCCCCATGTAGAC +
Preference number: 2 (lower is better)
Translates to: KTMMEAEMTSDWPASRPLIGTEH*QQPHVD
Trigger: GTCTACATGGGGCTGCTGGCAGTGTTCTGTACCAAT...TAACGGCCTAGAGGCTGGCCAGTCACTAGTCATTTCTGCTTCCATCATTGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
3UTR-3UTR CCA 90 bp CACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTTCCTAGCCCTGGTAGCAGCAGCTTATaGCGCCAGCGCAGATTCAGT +
Preference number: 2 (lower is better)
Translates to: HLIYNQMTCHRGACVPSPGSSSL*RQRRFS
Trigger: ACTGAATCTGCGCTGGCGCCATAAGCTGCTGCTACC...AGGGCTAGGAACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392834.7
ENST00000414373.5
3UTR-3UTR CCA 90 bp CAAGTTGATGAGGGTCATGTTGTTACATTCAGTGAATTCACCATCTTCAGTCTCTCGGGCGGAAGGGCTTaGGCACCACAATGGTCGTGT +
Preference number: 2 (lower is better)
Translates to: QVDEGHVVTFSEFTIFSLSGGRA*APQWSC
Trigger: ACACGACCATTGTGGTGCCCAAGCCCTTCCGCCCGA...GAGACTGAAGATGGTGAATTCACTGAATGTAACAACATGACCCTCATCAACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
3UTR-3UTR CCA 90 bp AGGAGCAATGTGAGGTTTCTCTCATGTATGGGCCCAAGGACTTTAAGTAGCAAGTGTACTGTCACCAGCTaGAGGCTCTCTGCCACCTTT +
Preference number: 2 (lower is better)
Translates to: RSNVRFLSCMGPRTLSSKCTVTS*RLSATF
Trigger: AAAGGTGGCAGAGAGCCTCCAGCTGGTGACAGTACA...CTTGCTACTTAAAGTCCTTGGGCCCATACATGAGAGAAACCTCACATTGCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000442480.1
ENST00000640102.1
ENST00000640747.1
3UTR-3UTR TCA 90 bp AGGGACTCAGACATCATAGAAGAGTCGAACGAGCTGATATCGAATGGAGAAGGTAAATCTGGAGGAGTATaGAGAGTGAGAGAGGCCTGG +
Preference number: 2 (lower is better)
Translates to: RDSDIIEESNELISNGEGKSGGV*RVREAW
Trigger: CCAGGCCTCTCTCACTCTTCATACTCCTCCAGATTT...ACCTTCTCCATTCGATATCAGCTCGTTCGACTCTTCTATGATGTCTGAGTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000640747.1
3UTR-3UTR TCA 90 bp TCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAATGTGAGTGTCTGTATCCCACCCTATaGGGCTGCAAAGATGGGATG +
Preference number: 2 (lower is better)
Translates to: SIPKTSGSLRVRTLKCECLYPTL*GCKDGM
Trigger: CATCCCATCTTTGCAGCCTCATAGGGTGGGATACAG...ACACTCACATTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
3UTR-3UTR TCA 90 bp GTTCCTAGCCCTGGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCCAGGACTCTGAAATGTaGGTGTGGATAACTGCAAAA +
Preference number: 2 (lower is better)
Translates to: VPSPGPSSIPKTSGSLRVQDSEM*VWITAK
Trigger: TTTTGCAGTTATCCACACTCACATTTCAGAGTCCTG...GACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCCAGGGCTAGGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
3UTR-3UTR TCA 90 bp CAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCACAGAGCAGGACTCTGAAATGTaGGTGTGGATAACTGCAAAA +
Preference number: 2 (lower is better)
Translates to: QSVVSRGQETPRMPMITEQDSEM*VWITAK
Trigger: TTTTGCAGTTATCCACACTCACATTTCAGAGTCCTG...CTCTGTGATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
3UTR-3UTR CCA 90 bp GTTGATGAGGGTCATGTTGTTACATTCAGTGAATTCACCATCTTCAGTCTCACTGGCAAGGAGGCAGTCTaGGACCAGAGAGAGAGGTCA +
Preference number: 2 (lower is better)
Translates to: VDEGHVVTFSEFTIFSLTGKEAV*DQRERS
Trigger: TGACCTCTCTCTCTGGTCCCAGACTGCCTCCTTGCC...AGTGAGACTGAAGATGGTGAATTCACTGAATGTAACAACATGACCCTCATCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000638850.1
ENST00000640747.1
3UTR-3UTR CCA 90 bp AGGAATCCTAGAGACTGTGAGGTAAAGGACAATGATCAAGGGACTCAGACATCAGCTTGGGCACCACAATaGTCGTGTTGCCAAAGTTGG +
Preference number: 2 (lower is better)
Translates to: RNPRDCEVKDNDQGTQTSAWAPQ*SCCQSW
Trigger: CCAACTTTGGCAACACGACCATTGTGGTGCCCAAGC...TGATGTCTGAGTCCCTTGATCATTGTCCTTTACCTCACAGTCTCTAGGATTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640747.1
3UTR-3UTR CCA 90 bp ATGTTGTTACATTCAGTGAATTCACCATCTTCAGTCTCACTCTGGTGTACTGTCTGTACTGTCACCAGCTaGAGGCTCTCTGCCACCTCC +
Preference number: 2 (lower is better)
Translates to: MLLHSVNSPSSVSLWCTVCTVTS*RLSATS
Trigger: GGAGGTGGCAGAGAGCCTCCAGCTGGTGACAGTACA...GACAGTACACCAGAGTGAGACTGAAGATGGTGAATTCACTGAATGTAACAACAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638850.1
3UTR-3UTR TCA 90 bp GAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTTCCTAGCAGAGAGAGGTCAGCCTaGGTCAGGAATCCTAGAGAC +
Preference number: 2 (lower is better)
Translates to: EHLIYNQMTCHRGACVPSRERSA*VRNPRD
Trigger: GTCTCTAGGATTCCTGACTCAGGCTGACCTCTCTCT...GCTAGGAACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
3UTR-3UTR TCA 90 bp TCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAATGTGAGTGTAAATCTGGAGGAGTATaGAGAGTGAGAGAGGCCTGG +
Preference number: 2 (lower is better)
Translates to: SIPKTSGSLRVRTLKCECKSGGV*RVREAW
Trigger: CCAGGCCTCTCTCACTCTTCATACTCCTCCAGATTT...ACACTCACATTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
3UTR-3UTR TCA 90 bp TATCATGAAGTAGAGGGAAAAGACATGATCATCCCGACAATCACCTTCCAACTCCTGTATCCCACCCTATaGGGCTGCAAAGATGGGATG +
Preference number: 2 (lower is better)
Translates to: YHEVEGKDMIIPTITFQLLYPTL*GCKDGM
Trigger: CATCCCATCTTTGCAGCCTCATAGGGTGGGATACAG...GAGTTGGAAGGTGATTGTCGGGATGATCATGTCTTTTCCCTCTACTTCATGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640747.1
3UTR-3UTR TCA 90 bp GAGAGTAGCAAGTTGCAGAAAGCCATAGGTAAAATCCAATCAGTAGTCAGCAGACTGTATCCCACCCTATaGGGCTGCAAAGATGGGATG +
Preference number: 2 (lower is better)
Translates to: ESSKLQKAIGKIQSVVSRLYPTL*GCKDGM
Trigger: CATCCCATCTTTGCAGCCTCATAGGGTGGGATACAG...TCTGCTGACTACTGATTGGATTTTACCTATGGCTTTCTGCAACTTGCTACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
3UTR-3UTR TCA 90 bp AGTGACTGGCCAGCCTCTAGGCCGTTAATTCCTGCTAGGATATTGATGGCATTGTTCCTGCTAGGATATTaGTGGCATTGGTACAGAACA +
Preference number: 2 (lower is better)
Translates to: SDWPASRPLIPARILMALFLLGY*WHWYRT
Trigger: TGTTCTGTACCAATGCCATCAATATCCTAGCAGGAA...CAATGCCATCAATATCCTAGCAGGAATTAACGGCCTAGAGGCTGGCCAGTCACT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
3UTR-3UTR CCA 90 bp ATGTTGTTACATTCAGTGAATTCACCATCTTCAGTCTCACTCTGGTGTACTGTCGGTAGCAGCAGCTTATaGCGCCAGCGCAGATTCAGT +
Preference number: 2 (lower is better)
Translates to: MLLHSVNSPSSVSLWCTVGSSSL*RQRRFS
Trigger: ACTGAATCTGCGCTGGCGCCATAAGCTGCTGCTACC...GACAGTACACCAGAGTGAGACTGAAGATGGTGAATTCACTGAATGTAACAACAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
3UTR-3UTR CCA 90 bp AGGAATCCTAGAGACTGTGAGGTAAAGGACAATGATCAAGGGACTCAGACATCAGAAATGACTAGTGACTaGCCAGCCTCTAGGCCGTTA +
Preference number: 2 (lower is better)
Translates to: RNPRDCEVKDNDQGTQTSEMTSD*PASRPL
Trigger: TAACGGCCTAGAGGCTGGCCAGTCACTAGTCATTTC...TGATGTCTGAGTCCCTTGATCATTGTCCTTTACCTCACAGTCTCTAGGATTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640747.1
3UTR-3UTR TCA 90 bp GAGAGTAGCAAGTTGCAGAAAGCCATAGGTAAAATCCAATCAGTAGTCAGCAGAAAATCTGGAGGAGTATaGAGAGTGAGAGAGGCCTGG +
Preference number: 2 (lower is better)
Translates to: ESSKLQKAIGKIQSVVSRKSGGV*RVREAW
Trigger: CCAGGCCTCTCTCACTCTTCATACTCCTCCAGATTT...TCTGCTGACTACTGATTGGATTTTACCTATGGCTTTCTGCAACTTGCTACTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
3UTR-3UTR TCA 90 bp CAAGTTGATGAGGGTCATGTTGTTACATTCAGTGAATTCACCATCTTCAGTCTCCTGTATCCCACCCTATaGGGCTGCAAAGATGGGATG +
Preference number: 2 (lower is better)
Translates to: QVDEGHVVTFSEFTIFSLLYPTL*GCKDGM
Trigger: CATCCCATCTTTGCAGCCTCATAGGGTGGGATACAG...GAGACTGAAGATGGTGAATTCACTGAATGTAACAACATGACCCTCATCAACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000638850.1
ENST00000640747.1
3UTR-3UTR TCA 90 bp ATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCACAGGACTCTGAAATGTaGGTGTGGATAACTGCAAAA +
Preference number: 2 (lower is better)
Translates to: IGKIQSVVSRGQETPRMPQDSEM*VWITAK
Trigger: TTTTGCAGTTATCCACACTCACATTTCAGAGTCCTG...TGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTTACCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
3UTR-3UTR TCA 90 bp AGGAGCAATGTGAGGTTTCTCTCATGTATGGGCCCAAGGACTTTAAGTAGCAAGAGAGGCTCTTGGTCTTaGACTTGGAATAGCTCATCT +
Preference number: 2 (lower is better)
Translates to: RSNVRFLSCMGPRTLSSKRGSWS*TWNSSS
Trigger: AGATGAGCTATTCCAAGTTCAAGACCAAGAGCCTCT...CTTGCTACTTAAAGTCCTTGGGCCCATACATGAGAGAAACCTCACATTGCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000640102.1
ENST00000640747.1
3UTR-3UTR GCA 90 bp GAAAAAGACAACACTTTATTGTCTCCATTGAGAGCATGTGGCCCCCTGCTTAGTGAGCATGTGGCCCCCTaGTTAGTTCTTACTAATCAG +
Preference number: 2 (lower is better)
Translates to: EKDNTLLSPLRACGPLLSEHVAP*LVLTNQ
Trigger: CTGATTAGTAAGAACTAAGCAGGGGGCCACATGCTC...ACTAAGCAGGGGGCCACATGCTCTCAATGGAGACAATAAAGTGTTGTCTTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
3UTR-3UTR CCA 90 bp AAAGGGTATCATGAAGTAGAGGGAAAAGACATGATCATCCCGACAATCACCTTCGAAATGACTAGTGACTaGCCAGCCTCTAGGCCGTTA +
Preference number: 2 (lower is better)
Translates to: KGYHEVEGKDMIIPTITFEMTSD*PASRPL
Trigger: TAACGGCCTAGAGGCTGGCCAGTCACTAGTCATTTC...GAAGGTGATTGTCGGGATGATCATGTCTTTTCCCTCTACTTCATGATACCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
3UTR-3UTR TCA 90 bp GCCTCTAGGCCGTTAATTCCTGCTAGGATATTGATGGCATTGGTACAGAACACTTTCCTGCTAGGATATTaGTGGCATTGGTACAGAACA +
Preference number: 2 (lower is better)
Translates to: ASRPLIPARILMALVQNTFLLGY*WHWYRT
Trigger: TGTTCTGTACCAATGCCATCAATATCCTAGCAGGAA...AGTGTTCTGTACCAATGCCATCAATATCCTAGCAGGAATTAACGGCCTAGAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
3UTR-3UTR CCA 90 bp AGTAGCAAGTTGATGAGGGTCATGTTGTTACATTCAGTGAATTCACCATCTTCAGCTTGGGCACCACAATaGTCGTGTTGCCAAAGTTGG +
Preference number: 2 (lower is better)
Translates to: SSKLMRVMLLHSVNSPSSAWAPQ*SCCQSW
Trigger: CCAACTTTGGCAACACGACCATTGTGGTGCCCAAGC...TGAAGATGGTGAATTCACTGAATGTAACAACATGACCCTCATCAACTTGCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
3UTR CAA 90 bp TGTATGGGCCCAAGGACTTTAAGTAGCAAGTTGATGAGGGTCATGTaGTTACATTCAGTGAATTCACCATCTTCAGTCTCACTCTGGTGT +
Preference number: 2 (lower is better)
Translates to: CMGPRTLSSKLMRVM*LHSVNSPSSVSLWC
Trigger: ACACCAGAGTGAGACTGAAGATGGTGAATTCACTGAATGTAACAACATGACCCTCATCAACTTGCTACTTAAAGTCCTTGGGCCCATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000442480.1
ENST00000638850.1
ENST00000640102.1
ENST00000640747.1
3UTR-3UTR TCA 90 bp AGTAGCAAGTTGATGAGGGTCATGTTGTTACATTCAGTGAATTCACCATCTTCAAAATCTGGAGGAGTATaGAGAGTGAGAGAGGCCTGG +
Preference number: 2 (lower is better)
Translates to: SSKLMRVMLLHSVNSPSSKSGGV*RVREAW
Trigger: CCAGGCCTCTCTCACTCTTCATACTCCTCCAGATTT...TGAAGATGGTGAATTCACTGAATGTAACAACATGACCCTCATCAACTTGCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000638850.1
ENST00000640747.1
3UTR-3UTR TCA 90 bp TCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAATGTGAGTGTCAGGACTCTGAAATGTaGGTGTGGATAACTGCAAAA +
Preference number: 2 (lower is better)
Translates to: SIPKTSGSLRVRTLKCECQDSEM*VWITAK
Trigger: TTTTGCAGTTATCCACACTCACATTTCAGAGTCCTG...ACACTCACATTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
3UTR-3UTR TCA 90 bp AGGACTTTAAGTAGCAAGTTGATGAGGGTCATGTTGTTACATTCAGTGAATTCATCCCACAAACACCCGTaGTGGGTACCAGTTGTGGTA +
Preference number: 2 (lower is better)
Translates to: RTLSSKLMRVMLLHSVNSSHKHP*WVPVVV
Trigger: TACCACAACTGGTACCCATCACGGGTGTTTGTGGGA...TGAATTCACTGAATGTAACAACATGACCCTCATCAACTTGCTACTTAAAGTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000640102.1
ENST00000640747.1
3UTR CAA 90 bp GTGAGGTTTCTCTCATGTATGGGCCCAAGGACTTTAAGTAGCAAGTaGATGAGGGTCATGTTGTTACATTCAGTGAATTCACCATCTTCA +
Preference number: 2 (lower is better)
Translates to: VRFLSCMGPRTLSSK*MRVMLLHSVNSPSS
Trigger: TGAAGATGGTGAATTCACTGAATGTAACAACATGACCCTCATCAACTTGCTACTTAAAGTCCTTGGGCCCATACATGAGAGAAACCTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000442480.1
ENST00000638850.1
ENST00000640102.1
ENST00000640747.1
3UTR-3UTR TCA 90 bp TCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAATGTGAGTGTTGTTGTTACATTCAGTaGATTCACCATCTTCAGTCT +
Preference number: 2 (lower is better)
Translates to: SIPKTSGSLRVRTLKCECCCYIQ*IHHLQS
Trigger: AGACTGAAGATGGTGAATTCACTGAATGTAACAACA...ACACTCACATTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000638850.1
ENST00000640747.1
3UTR-3UTR TCA 90 bp AGGACTTTAAGTAGCAAGTTGATGAGGGTCATGTTGTTACATTCAGTGAATTCACAGGACTCTGAAATGTaGGTGTGGATAACTGCAAAA +
Preference number: 2 (lower is better)
Translates to: RTLSSKLMRVMLLHSVNSQDSEM*VWITAK
Trigger: TTTTGCAGTTATCCACACTCACATTTCAGAGTCCTG...TGAATTCACTGAATGTAACAACATGACCCTCATCAACTTGCTACTTAAAGTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000638850.1
ENST00000640747.1
3UTR-3UTR TCA 90 bp TTACTAATCAGAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTTGTTACATTCAGTaGATTCACCATCTTCAGTCT +
Preference number: 2 (lower is better)
Translates to: LLIRTLNLQSNDMSPWSLCCYIQ*IHHLQS
Trigger: AGACTGAAGATGGTGAATTCACTGAATGTAACAACA...CAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTCTGATTAGTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392834.7
ENST00000414373.5
3UTR-3UTR CAA 90 bp TGGGGCATGAAGAATAGTAGCATGGTCTTGCTGAAGTGTCCCAAGATGCCCACCATCGGGCGGAAGGGCTaGGGCACCACAATGGTCGTG +
Preference number: 3 (lower is better)
Translates to: WGMKNSSMVLLKCPKMPTIGRKG*GTTMVV
Trigger: CACGACCATTGTGGTGCCCAAGCCCTTCCGCCCGAT...GGTGGGCATCTTGGGACACTTCAGCAAGACCATGCTACTATTCTTCATGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000640102.1
ENST00000640747.1
3UTR-3UTR CAA 90 bp GGCATTGGTACAGAACACTGCCAGCAGCCCCATGTAGACATAGTACAGGATTCCATCGGGCGGAAGGGCTaGGGCACCACAATGGTCGTG +
Preference number: 3 (lower is better)
Translates to: GIGTEHCQQPHVDIVQDSIGRKG*GTTMVV
Trigger: CACGACCATTGTGGTGCCCAAGCCCTTCCGCCCGAT...GGAATCCTGTACTATGTCTACATGGGGCTGCTGGCAGTGTTCTGTACCAATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
3UTR-3UTR CAA 90 bp TTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTTCCTAGCCCTGGCATCGGGCGGAAGGGCTaGGGCACCACAATGGTCGTG +
Preference number: 3 (lower is better)
Translates to: LIYNQMTCHRGACVPSPGIGRKG*GTTMVV
Trigger: CACGACCATTGTGGTGCCCAAGCCCTTCCGCCCGAT...GCCAGGGCTAGGAACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392834.7
ENST00000414373.5
3UTR CCA 72 bp TTACATTCAGTGAATTCACCATCTTCAGTCTCACTCTaGTGTACTGTCACCAGCTGGAGGCTCTCTGCCACC +
Preference number: 3 (lower is better)
Translates to: LHSVNSPSSVSL*CTVTSWRLSAT
Trigger: GGTGGCAGAGAGCCTCCAGCTGGTGACAGTACACCAGAGTGAGACTGAAGATGGTGAATTCACTGAATGTAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000442480.1
ENST00000638850.1
ENST00000640102.1
ENST00000640747.1
3UTR-3UTR CAA 90 bp AGATGCCCACCACGGCAAAGGTCATGCCAGCAAAGTAACAGAAGGTATCTCCCAGGAGAGAGTAGCAAGTaGCAGAAAGCCATAGGTAAA +
Preference number: 3 (lower is better)
Translates to: RCPPRQRSCQQSNRRYLPGESSK*QKAIGK
Trigger: TTTACCTATGGCTTTCTGCAACTTGCTACTCTCTCC...TGGGAGATACCTTCTGTTACTTTGCTGGCATGACCTTTGCCGTGGTGGGCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392834.7
ENST00000640747.1
3UTR-3UTR CAA 90 bp AAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCACTTTATTGTCTCCATaGAGAGCATGTGGCCCCCTG +
Preference number: 3 (lower is better)
Translates to: KIQSVVSRGQETPRMPMITLLSP*RACGPL
Trigger: CAGGGGGCCACATGCTCTCAATGGAGACAATAAAGT...GATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
3UTR-3UTR CAA 90 bp ATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCACAGAGAATCCAACTCTACCAGGTaGAAGACAATGATGGAAGCA +
Preference number: 3 (lower is better)
Translates to: ISSQQRARNAQDANDHRESNSTR*KTMMEA
Trigger: TGCTTCCATCATTGTCTTCAACCTGGTAGAGTTGGA...TTCTCTGTGATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640747.1
3UTR-3UTR CAA 90 bp TCGAACGAGCTGATATCGAATGGAGAAGGTGATGGCACTGCCCAGGATCTGCAGTTGATGAGGGTCATGTaGTTACATTCAGTGAATTCA +
Preference number: 3 (lower is better)
Translates to: SNELISNGEGDGTAQDLQLMRVM*LHSVNS
Trigger: TGAATTCACTGAATGTAACAACATGACCCTCATCAA...CTGCAGATCCTGGGCAGTGCCATCACCTTCTCCATTCGATATCAGCTCGTTCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000442480.1
ENST00000638850.1
ENST00000640747.1
3UTR-3UTR CAA 90 bp GTTCCTAGCCCTGGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAAAGACAACACTTTATaGTCTCCATTGAGAGCATGT +
Preference number: 3 (lower is better)
Translates to: VPSPGPSSIPKTSGSLRVKDNTL*SPLRAC
Trigger: ACATGCTCTCAATGGAGACAATAAAGTGTTGTCTTT...GACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCCAGGGCTAGGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
3UTR-3UTR CAA 90 bp TCAGACATCATAGAAGAGTCGAACGAGCTGATATCGAATGGAGAAGGTGATGGCAATAGTAGCATGGTCTaGCTGAAGTGTCCCAAGATG +
Preference number: 3 (lower is better)
Translates to: SDIIEESNELISNGEGDGNSSMV*LKCPKM
Trigger: CATCTTGGGACACTTCAGCAAGACCATGCTACTATT...GCCATCACCTTCTCCATTCGATATCAGCTCGTTCGACTCTTCTATGATGTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392834.7
ENST00000640747.1
3UTR-3UTR CAA 90 bp CACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTTCCTAGCCCTGGAGAGAGTAGCAAGTaGCAGAAAGCCATAGGTAAA +
Preference number: 3 (lower is better)
Translates to: HLIYNQMTCHRGACVPSPGESSK*QKAIGK
Trigger: TTTACCTATGGCTTTCTGCAACTTGCTACTCTCTCC...AGGGCTAGGAACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
3UTR-3UTR CAA 90 bp TCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAATGTGAGTGTGGAGAGAGTAGCAAGTaGCAGAAAGCCATAGGTAAA +
Preference number: 3 (lower is better)
Translates to: SIPKTSGSLRVRTLKCECGESSK*QKAIGK
Trigger: TTTACCTATGGCTTTCTGCAACTTGCTACTCTCTCC...ACACTCACATTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
3UTR-3UTR CAA 90 bp AGGAATCCTAGAGACTGTGAGGTAAAGGACAATGATCAAGGGACTCAGACATCAGGAGAGAGTAGCAAGTaGCAGAAAGCCATAGGTAAA +
Preference number: 3 (lower is better)
Translates to: RNPRDCEVKDNDQGTQTSGESSK*QKAIGK
Trigger: TTTACCTATGGCTTTCTGCAACTTGCTACTCTCTCC...TGATGTCTGAGTCCCTTGATCATTGTCCTTTACCTCACAGTCTCTAGGATTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000640747.1
3UTR-3UTR CAA 90 bp AAGTTGAACACCTGGGGCATGAAGAATAGTAGCATGGTCTTGCTGAAGTGTCCCAAAGACAACACTTTATaGTCTCCATTGAGAGCATGT +
Preference number: 3 (lower is better)
Translates to: KLNTWGMKNSSMVLLKCPKDNTL*SPLRAC
Trigger: ACATGCTCTCAATGGAGACAATAAAGTGTTGTCTTT...GGGACACTTCAGCAAGACCATGCTACTATTCTTCATGCCCCAGGTGTTCAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392834.7
3UTR-3UTR CAA 90 bp AAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCAAAGACAACACTTTATaGTCTCCATTGAGAGCATGT +
Preference number: 3 (lower is better)
Translates to: KIQSVVSRGQETPRMPMIKDNTL*SPLRAC
Trigger: ACATGCTCTCAATGGAGACAATAAAGTGTTGTCTTT...GATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
3UTR-3UTR CAA 90 bp GTTGATGAGGGTCATGTTGTTACATTCAGTGAATTCACCATCTTCAGTCTCACTGGAGAGAGTAGCAAGTaGCAGAAAGCCATAGGTAAA +
Preference number: 3 (lower is better)
Translates to: VDEGHVVTFSEFTIFSLTGESSK*QKAIGK
Trigger: TTTACCTATGGCTTTCTGCAACTTGCTACTCTCTCC...AGTGAGACTGAAGATGGTGAATTCACTGAATGTAACAACATGACCCTCATCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000638850.1
ENST00000640747.1
3UTR-3UTR CAA 90 bp CTAATCAGAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTAGGATATTGATGGCATaGGTACAGAACACTGCCAGC +
Preference number: 3 (lower is better)
Translates to: LIRTLNLQSNDMSPWSLCRILMA*VQNTAS
Trigger: GCTGGCAGTGTTCTGTACCAATGCCATCAATATCCT...ACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTCTGATTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392834.7
ENST00000414373.5
3UTR-3UTR CAA 90 bp AGTAGCAAGTTGATGAGGGTCATGTTGTTACATTCAGTGAATTCACCATCTTCATCCAGTTTGCCTGTCTaGATATTGAGTCTGGGTATG +
Preference number: 3 (lower is better)
Translates to: SSKLMRVMLLHSVNSPSSSSLPV*ILSLGM
Trigger: CATACCCAGACTCAATATCAAGACAGGCAAACTGGA...TGAAGATGGTGAATTCACTGAATGTAACAACATGACCCTCATCAACTTGCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000640102.1
ENST00000640747.1
3UTR TCA 72 bp AACAATAAGAAAAAGACAACACTTTATTGTCTCCATTaGGAGCATGTGGCCCCCTGCTTAGTTCTTACTAAT +
Preference number: 3 (lower is better)
Translates to: NNKKKTTLYCLH*EHVAPCLVLTN
Trigger: ATTAGTAAGAACTAAGCAGGGGGCCACATGCTCTCAATGGAGACAATAAAGTGTTGTCTTTTTCTTATTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR CCA 90 bp AGGATTCCCAAGTCCAGATGCAGGCCAAGTATCGGGCGGAAGGGCTTGGGCACCCGCGCAGCAATGAAGTaGCCCCGGAAGGCCGGGATG +
Preference number: 4 (lower is better)
Translates to: RIPKSRCRPSIGRKGLGTRAAMK*PRKAGM
Trigger: CATCCCGGCCTTCCGGGGCCACTTCATTGCTGCGCG...GGTGCCCAAGCCCTTCCGCCCGATACTTGGCCTGCATCTGGACTTGGGAATCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
CDS-3UTR CCA 90 bp AGATGCAGGCCAAGTATCGGGCGGAAGGGCTTGGGCACCACAATGGTCGTGTTGCGCGCAGCAATGAAGTaGCCCCGGAAGGCCGGGATG +
Preference number: 4 (lower is better)
Translates to: RCRPSIGRKGLGTTMVVLRAAMK*PRKAGM
Trigger: CATCCCGGCCTTCCGGGGCCACTTCATTGCTGCGCG...CAACACGACCATTGTGGTGCCCAAGCCCTTCCGCCCGATACTTGGCCTGCATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
CDS-3UTR TCA 90 bp GACATAGTACAGGATTCCCAAGTCCAGATGCAGGCCAAGTATCGGGCGGAAGGGAGAGGCGCGCAGCAATaGAGTGGCCCCGGAAGGCCG +
Preference number: 4 (lower is better)
Translates to: DIVQDSQVQMQAKYRAEGRGAQQ*SGPGRP
Trigger: CGGCCTTCCGGGGCCACTTCATTGCTGCGCGCCTCT...CCCTTCCGCCCGATACTTGGCCTGCATCTGGACTTGGGAATCCTGTACTATGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
CDS-3UTR TCA 90 bp TACAGGATTCCCAAGTCCAGATGCAGGCCAAGTATCGGGCGGAAGGGCTTGGGCGGCGAGGGCAGGGGATaGTATGCAGGAGCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: YRIPKSRCRPSIGRKGLGGEGRG*YAGAEA
Trigger: TGCCTCAGCTCCTGCATATCATCCCCTGCCCTCGCC...GCCCAAGCCCTTCCGCCCGATACTTGGCCTGCATCTGGACTTGGGAATCCTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000640102.1
ENST00000640747.1
CDS-3UTR TCA 90 bp CCAAGTATCGGGCGGAAGGGCTTGGGCACCACAATGGTCGTGTTGCCAAAGTTGGGCGAGGGCAGGGGATaGTATGCAGGAGCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: PSIGRKGLGTTMVVLPKLGEGRG*YAGAEA
Trigger: TGCCTCAGCTCCTGCATATCATCCCCTGCCCTCGCC...CAACTTTGGCAACACGACCATTGTGGTGCCCAAGCCCTTCCGCCCGATACTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000640102.1
ENST00000640747.1
CDS-3UTR TCA 90 bp CAAGTCCAGATGCAGGCCAAGTATCGGGCGGAAGGGCTTGGGCACCACAATGGTGCTCGGGCAGGTCCATaGCTCAAGCTTCATGGTGGG +
Preference number: 4 (lower is better)
Translates to: QVQMQAKYRAEGLGHHNGARAGP*LKLHGG
Trigger: CCCACCATGAAGCTTGAGTCATGGACCTGCCCGAGC...ACCATTGTGGTGCCCAAGCCCTTCCGCCCGATACTTGGCCTGCATCTGGACTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414373.5
CDS-3UTR CCA 90 bp GCTGTATCCCACCCTATGAGGCTGCAAAGATGGGATGGAGAGGGAGAGAGTAGCCGCGCAGCAATGAAGTaGCCCCGGAAGGCCGGGATG +
Preference number: 4 (lower is better)
Translates to: AVSHPMRLQRWDGEGESSRAAMK*PRKAGM
Trigger: CATCCCGGCCTTCCGGGGCCACTTCATTGCTGCGCG...GCTACTCTCTCCCTCTCCATCCCATCTTTGCAGCCTCATAGGGTGGGATACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CCA 90 bp AGGATTCCCAAGTCCAGATGCAGGCCAAGTATCGGGCGGAAGGGCTTGGGCACCAGTCTGGGTATGCGGTaGCGAGGGCAGGGGATGATA +
Preference number: 4 (lower is better)
Translates to: RIPKSRCRPSIGRKGLGTSLGMR*RGQGMI
Trigger: TATCATCCCCTGCCCTCGCCACCGCATACCCAGACT...GGTGCCCAAGCCCTTCCGCCCGATACTTGGCCTGCATCTGGACTTGGGAATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000640102.1
ENST00000640747.1
CDS-3UTR CCA 90 bp GTTCCTAGCCCTGGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCGTTCCCTGCGGGAGCTaGGCGTGTGGCGCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: VPSPGPSSIPKTSGSLRVVPCGS*ACGARC
Trigger: GCAGCGAGCGCCACACGCCCAGCTCCCGCAGGGAAC...GACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCCAGGGCTAGGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR TCA 90 bp CCAAGTATCGGGCGGAAGGGCTTGGGCACCACAATGGTCGTGTTGCCAAAGTTGGCTGAGCAGCAGTCCTaGGGCCTCAGCAGTATGGAG +
Preference number: 4 (lower is better)
Translates to: PSIGRKGLGTTMVVLPKLAEQQS*GLSSME
Trigger: CTCCATACTGCTGAGGCCTCAGGACTGCTGCTCAGC...CAACTTTGGCAACACGACCATTGTGGTGCCCAAGCCCTTCCGCCCGATACTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
CDS-3UTR TCA 90 bp AGATGCCCACCACGGCAAAGGTCATGCCAGCAAAGTAACAGAAGGTATCTCCCAAGAAGGCCCACATGGTaGCCGGTCAGGGGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: RCPPRQRSCQQSNRRYLPRRPTW*PVRGPA
Trigger: AGCCGGGCCCCTGACCGGTCACCATGTGGGCCTTCT...TGGGAGATACCTTCTGTTACTTTGCTGGCATGACCTTTGCCGTGGTGGGCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000640102.1
ENST00000640747.1
CDS-3UTR GCA 90 bp CCCAAGTCCAGATGCAGGCCAAGTATCGGGCGGAAGGGCTTGGGCACCACAATGATTCCCAAGTCCAGATaGAGGCCAAGTATCGGGCGG +
Preference number: 4 (lower is better)
Translates to: PKSRCRPSIGRKGLGTTMIPKSR*RPSIGR
Trigger: CCGCCCGATACTTGGCCTGCATCTGGACTTGGGAAT...CATTGTGGTGCCCAAGCCCTTCCGCCCGATACTTGGCCTGCATCTGGACTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
CDS-3UTR CCA 90 bp GACATAGTACAGGATTCCCAAGTCCAGATGCAGGCCAAGTATCGGGCGGAAGGGGAGGCCTCAGCAGTATaGAGTGGCCGCTCCCCACAG +
Preference number: 4 (lower is better)
Translates to: DIVQDSQVQMQAKYRAEGEASAV*SGRSPQ
Trigger: CTGTGGGGAGCGGCCACTCCATACTGCTGAGGCCTC...CCCTTCCGCCCGATACTTGGCCTGCATCTGGACTTGGGAATCCTGTACTATGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
CDS-3UTR CCA 90 bp GCTGTATCCCACCCTATGAGGCTGCAAAGATGGGATGGAGAGGGAGAGAGTAGCAACTGGCAGCGGGCTTaGGTGCGAGCGCTGAACGAG +
Preference number: 4 (lower is better)
Translates to: AVSHPMRLQRWDGEGESSNWQRA*VRALNE
Trigger: CTCGTTCAGCGCTCGCACCCAAGCCCGCTGCCAGTT...GCTACTCTCTCCCTCTCCATCCCATCTTTGCAGCCTCATAGGGTGGGATACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR TCA 90 bp ACAGAACACTGCCAGCAGCCCCATGTAGACATAGTACAGGATTCCCAAGTCCAGCCAGCAACTCTGACTTaGGCCGCCGTCGGGACACCG +
Preference number: 4 (lower is better)
Translates to: TEHCQQPHVDIVQDSQVQPATLT*AAVGTP
Trigger: CGGTGTCCCGACGGCGGCTCAAGTCAGAGTTGCTGG...CTGGACTTGGGAATCCTGTACTATGTCTACATGGGGCTGCTGGCAGTGTTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
CDS-3UTR TCA 90 bp ATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCACAGAGAAAGAAGGCCCACATGGTaGCCGGTCAGGGGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: ISSQQRARNAQDANDHRERRPTW*PVRGPA
Trigger: AGCCGGGCCCCTGACCGGTCACCATGTGGGCCTTCT...TTCTCTGTGATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp TGTACTGTCACCAGCTGGAGGCTCTCTGCCACCTTTAAAATAAAGGTGCCCAAGAGAAGGCCCACATGGTaGCCGGTCAGGGGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: CTVTSWRLSATFKIKVPKRRPTW*PVRGPA
Trigger: AGCCGGGCCCCTGACCGGTCACCATGTGGGCCTTCT...CTTGGGCACCTTTATTTTAAAGGTGGCAGAGAGCCTCCAGCTGGTGACAGTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000640102.1
ENST00000640747.1
CDS-3UTR TCA 90 bp AGCAGCAGCTTATGGCGCCAGCGCAGATTCAGTACATCATCCGCAAAGCCCAGGGTTTTGTTGAGGTCCTaGCCACAGAGGCGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: SSSLWRQRRFSTSSAKPRVLLRS*PQRRAA
Trigger: TGCTGCGCGCCTCTGTGGTCAGGACCTCAACAAAAC...CCTGGGCTTTGCGGATGATGTACTGAATCTGCGCTGGCGCCATAAGCTGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640747.1
CDS-3UTR TCA 90 bp AGGATTCCCAAGTCCAGATGCAGGCCAAGTATCGGGCGGAAGGGCTTGGGCACCGTAGCATGGTCTTGCTaGAGTGTCCCAAGATGCCCA +
Preference number: 4 (lower is better)
Translates to: RIPKSRCRPSIGRKGLGTVAWSC*SVPRCP
Trigger: TGGGCATCTTGGGACACTTCAGCAAGACCATGCTAC...GGTGCCCAAGCCCTTCCGCCCGATACTTGGCCTGCATCTGGACTTGGGAATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000640102.1
ENST00000640747.1
CDS-3UTR TCA 90 bp ATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAGCTGGGCGGCCTTGCTaGTCCTCTTCGCCGCCTCGC +
Preference number: 4 (lower is better)
Translates to: IGKIQSVVSRGQETPRMPAGRPC*SSSPPR
Trigger: GCGAGGCGGCGAAGAGGATCAGCAAGGCCGCCCAGC...TGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTTACCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR GCA 90 bp GTCCAGATGCAGGCCAAGTATCGGGCGGAAGGGCTTGGGCACCACAATGGTCGTCAAGGAGGGCACATCTaGTGTCGGCTGGTTTTGTTG +
Preference number: 4 (lower is better)
Translates to: VQMQAKYRAEGLGHHNGRQGGHI*CRLVLL
Trigger: CAACAAAACCAGCCGACAGCAGATGTGCCCTCCTTG...ACGACCATTGTGGTGCCCAAGCCCTTCCGCCCGATACTTGGCCTGCATCTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640102.1
CDS-3UTR CCA 90 bp AAAGCCATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGAGCATGGATCCGGGCTaGGGGCAGCGGGACGTGGGC +
Preference number: 4 (lower is better)
Translates to: KAIGKIQSVVSRGQETPRSMDPG*GQRDVG
Trigger: GCCCACGTCCCGCTGCCCCCAGCCCGGATCCATGCT...CCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTTACCTATGGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR TCA 90 bp AAAGCCATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGAGAAGGCCCACATGGTaGCCGGTCAGGGGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: KAIGKIQSVVSRGQETPRRRPTW*PVRGPA
Trigger: AGCCGGGCCCCTGACCGGTCACCATGTGGGCCTTCT...CCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTTACCTATGGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp GGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAAAGAGGCGCGCAGCAATaGAGTGGCCCCGGAAGGCCG +
Preference number: 4 (lower is better)
Translates to: GPSSIPKTSGSLRVRTLKRGAQQ*SGPGRP
Trigger: CGGCCTTCCGGGGCCACTTCATTGCTGCGCGCCTCT...TTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR GCA 90 bp CACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTTCCTAGCCCTTGTGGCGCTCGCTGCTaGGGCTGCGGGCGACTCGGG +
Preference number: 4 (lower is better)
Translates to: HLIYNQMTCHRGACVPSPCGARC*GCGRLG
Trigger: CCCGAGTCGCCCGCAGCCGCAGCAGCGAGCGCCACA...AGGGCTAGGAACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR CCA 90 bp GTTCCTAGCCCTGGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCCTCAGCAGTATGGAGTaGCCGCTCCCCACAGGCAGG +
Preference number: 4 (lower is better)
Translates to: VPSPGPSSIPKTSGSLRVLSSME*PLPTGR
Trigger: CCTGCCTGTGGGGAGCGGCCACTCCATACTGCTGAG...GACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCCAGGGCTAGGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CCA 90 bp ATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCACAGAGAACGCGCAGCAATGAAGTaGCCCCGGAAGGCCGGGATG +
Preference number: 4 (lower is better)
Translates to: ISSQQRARNAQDANDHRERAAMK*PRKAGM
Trigger: CATCCCGGCCTTCCGGGGCCACTTCATTGCTGCGCG...TTCTCTGTGATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CCA 90 bp CAGTCTCACTCTGGTGTACTGTCACCAGCTGGAGGCTCTCTGCCACCAGTTGTGCCGCTGATCACTCCCTaGGATTCTGGGATCTGCTGT +
Preference number: 4 (lower is better)
Translates to: QSHSGVLSPAGGSLPPVVPLITP*DSGICC
Trigger: ACAGCAGATCCCAGAATCCCAGGGAGTGATCAGCGG...CACAACTGGTGGCAGAGAGCCTCCAGCTGGTGACAGTACACCAGAGTGAGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414373.5
CDS-3UTR CCA 90 bp AAAGCCATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGCAGCGGGACGTGGGCTaGGCGGCCTTGCTGATCCTC +
Preference number: 4 (lower is better)
Translates to: KAIGKIQSVVSRGQETPRQRDVG*AALLIL
Trigger: GAGGATCAGCAAGGCCGCCCAGCCCACGTCCCGCTG...CCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTTACCTATGGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR CCA 90 bp AAAGCCATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGGGAGGAGTCGGGCACTaGCCGGCGACTAACGGGTCC +
Preference number: 4 (lower is better)
Translates to: KAIGKIQSVVSRGQETPRGGVGH*PATNGS
Trigger: GGACCCGTTAGTCGCCGGCCAGTGCCCGACTCCTCC...CCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTTACCTATGGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR CCA 90 bp GCTGTATCCCACCCTATGAGGCTGCAAAGATGGGATGGAGAGGGAGAGAGTAGCTGTACTGTCACCAGCTaGAGGCTCTCTGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: AVSHPMRLQRWDGEGESSCTVTS*RLSATS
Trigger: GGAGGTGGCAGAGAGCCTCCAGCTGGTGACAGTACA...GCTACTCTCTCCCTCTCCATCCCATCTTTGCAGCCTCATAGGGTGGGATACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638850.1
3UTR CAA 72 bp AAGTCCAGATGCAGGCCAAGTATCGGGCGGAAGGGCTaGGGCACCACAATGGTCGTGTTGCCAAAGTTGGTG +
Preference number: 4 (lower is better)
Translates to: KSRCRPSIGRKG*GTTMVVLPKLV
Trigger: CACCAACTTTGGCAACACGACCATTGTGGTGCCCAAGCCCTTCCGCCCGATACTTGGCCTGCATCTGGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
CDS-3UTR TCA 90 bp ATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCACCAGCAACTCTGACTTaGGCCGCCGTCGGGACACCG +
Preference number: 4 (lower is better)
Translates to: IGKIQSVVSRGQETPRMPPATLT*AAVGTP
Trigger: CGGTGTCCCGACGGCGGCTCAAGTCAGAGTTGCTGG...TGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTTACCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp AGCAGGAGCAATGTGAGGTTTCTCTCATGTATGGGCCCAAGGACTTTAAGTAGCCCAGCAACTCTGACTTaGGCCGCCGTCGGGACACCG +
Preference number: 4 (lower is better)
Translates to: SRSNVRFLSCMGPRTLSSPATLT*AAVGTP
Trigger: CGGTGTCCCGACGGCGGCTCAAGTCAGAGTTGCTGG...GCTACTTAAAGTCCTTGGGCCCATACATGAGAGAAACCTCACATTGCTCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
CDS-3UTR TCA 90 bp TTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTTCCTAGCCCTGGCAGAAGGCCCACATGGTaGCCGGTCAGGGGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: LIYNQMTCHRGACVPSPGRRPTW*PVRGPA
Trigger: AGCCGGGCCCCTGACCGGTCACCATGTGGGCCTTCT...GCCAGGGCTAGGAACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
CDS-3UTR TCA 90 bp CCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAATGAGAGGCGCGCAGCAATaGAGTGGCCCCGGAAGGCCG +
Preference number: 4 (lower is better)
Translates to: PKFYPKNQWFLESQDSEMRGAQQ*SGPGRP
Trigger: CGGCCTTCCGGGGCCACTTCATTGCTGCGCGCCTCT...CATTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp CTCTCTGCCACCTTTAAAATAAAGGTGCCCAAGAAAGAGAGGCTCTTGGTCTTGAGAGGCGCGCAGCAATaGAGTGGCCCCGGAAGGCCG +
Preference number: 4 (lower is better)
Translates to: LSATFKIKVPKKERLLVLRGAQQ*SGPGRP
Trigger: CGGCCTTCCGGGGCCACTTCATTGCTGCGCGCCTCT...CAAGACCAAGAGCCTCTCTTTCTTGGGCACCTTTATTTTAAAGGTGGCAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000640102.1
ENST00000640747.1
CDS-3UTR GCA 90 bp CAAGTCCAGATGCAGGCCAAGTATCGGGCGGAAGGGCTTGGGCACCACAATGGTATTGGTACAGAACACTaGCAGCAGCCCCATGTAGAC +
Preference number: 4 (lower is better)
Translates to: QVQMQAKYRAEGLGHHNGIGTEH*QQPHVD
Trigger: GTCTACATGGGGCTGCTGGCAGTGTTCTGTACCAAT...ACCATTGTGGTGCCCAAGCCCTTCCGCCCGATACTTGGCCTGCATCTGGACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
CDS-3UTR GCA 90 bp ATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAGAGCCCCAGCGTCTCTaGAGACCAGTCCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: IGKIQSVVSRGQETPRMPEPQRL*RPVPSR
Trigger: CCTGGAGGGGACTGGTCTGCAGAGACGCTGGGGCTC...TGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTTACCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR CCA 90 bp ATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCACAGAGAAGAGGCCTCAGCAGTATaGAGTGGCCGCTCCCCACAG +
Preference number: 4 (lower is better)
Translates to: ISSQQRARNAQDANDHREEASAV*SGRSPQ
Trigger: CTGTGGGGAGCGGCCACTCCATACTGCTGAGGCCTC...TTCTCTGTGATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CCA 90 bp ATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCACGCGCAGCAATGAAGTaGCCCCGGAAGGCCGGGATG +
Preference number: 4 (lower is better)
Translates to: IGKIQSVVSRGQETPRMPRAAMK*PRKAGM
Trigger: CATCCCGGCCTTCCGGGGCCACTTCATTGCTGCGCG...TGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTTACCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CCA 90 bp GAGCTGATATCGAATGGAGAAGGTGATGGCACTGCCCAGGATCTGCAGCAGCAGGGTAGCAGCAGCTTATaGCGCCAGCGCAGATTCAGT +
Preference number: 4 (lower is better)
Translates to: ELISNGEGDGTAQDLQQQGSSSL*RQRRFS
Trigger: ACTGAATCTGCGCTGGCGCCATAAGCTGCTGCTACC...CTGCTGCTGCAGATCCTGGGCAGTGCCATCACCTTCTCCATTCGATATCAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000442480.1
ENST00000640747.1
CDS-3UTR CCA 90 bp AGATGCCCACCACGGCAAAGGTCATGCCAGCAAAGTAACAGAAGGTATCTCCCATCGGGCGGAAGGGCTTaGGCACCACAATGGTCGTGT +
Preference number: 4 (lower is better)
Translates to: RCPPRQRSCQQSNRRYLPSGGRA*APQWSC
Trigger: ACACGACCATTGTGGTGCCCAAGCCCTTCCGCCCGA...TGGGAGATACCTTCTGTTACTTTGCTGGCATGACCTTTGCCGTGGTGGGCATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000640102.1
ENST00000640747.1
CDS-3UTR CCA 90 bp GTACAGGATTCCCAAGTCCAGATGCAGGCCAAGTATCGGGCGGAAGGGCTTGGGGAAATGACTAGTGACTaGCCAGCCTCTAGGCCGTTA +
Preference number: 4 (lower is better)
Translates to: VQDSQVQMQAKYRAEGLGEMTSD*PASRPL
Trigger: TAACGGCCTAGAGGCTGGCCAGTCACTAGTCATTTC...CCCAAGCCCTTCCGCCCGATACTTGGCCTGCATCTGGACTTGGGAATCCTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
CDS-3UTR CCA 90 bp TCGAACGAGCTGATATCGAATGGAGAAGGTGATGGCACTGCCCAGGATCTGCAGGGCAAGGAGGCAGTCTaGGACCAGAGAGAGAGGTCA +
Preference number: 4 (lower is better)
Translates to: SNELISNGEGDGTAQDLQGKEAV*DQRERS
Trigger: TGACCTCTCTCTCTGGTCCCAGACTGCCTCCTTGCC...CTGCAGATCCTGGGCAGTGCCATCACCTTCTCCATTCGATATCAGCTCGTTCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000638850.1
ENST00000640747.1
CDS-3UTR CCA 90 bp CAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCACAGAGCTCACGGTGTTCGCCTaGCTGCTGCAATATGCCCGG +
Preference number: 4 (lower is better)
Translates to: QSVVSRGQETPRMPMITELTVFA*LLQYAR
Trigger: CCGGGCATATTGCAGCAGCCAGGCGAACACCGTGAG...CTCTGTGATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR CCA 90 bp ATAGAAGAGTCGAACGAGCTGATATCGAATGGAGAAGGTGATGGCACTGCCCAGATCAGGGCCACAAACTaGGGGAGGCTCGGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: IEESNELISNGEGDGTAQIRATN*GRLGQV
Trigger: GACCTGCCCGAGCCTCCCCCAGTTTGTGGCCCTGAT...CTGGGCAGTGCCATCACCTTCTCCATTCGATATCAGCTCGTTCGACTCTTCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414373.5
CDS-3UTR TCA 90 bp GTTCCTAGCCCTGGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAAAACCCAGCAACTCTaGCTTGAGCCGCCGTCGGGA +
Preference number: 4 (lower is better)
Translates to: VPSPGPSSIPKTSGSLRVKTQQL*LEPPSG
Trigger: TCCCGACGGCGGCTCAAGTCAGAGTTGCTGGGTTTT...GACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCCAGGGCTAGGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp TGGCATTGGTACAGAACACTGCCAGCAGCCCCATGTAGACATAGTACAGGATTCGCTGAGCAGCAGTCCTaGGGCCTCAGCAGTATGGAG +
Preference number: 4 (lower is better)
Translates to: WHWYRTLPAAPCRHSTGFAEQQS*GLSSME
Trigger: CTCCATACTGCTGAGGCCTCAGGACTGCTGCTCAGC...GAATCCTGTACTATGTCTACATGGGGCTGCTGGCAGTGTTCTGTACCAATGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
CDS-3UTR TCA 90 bp ATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCACAGAGAAGCTGAGCAGCAGTCCTaGGGCCTCAGCAGTATGGAG +
Preference number: 4 (lower is better)
Translates to: ISSQQRARNAQDANDHREAEQQS*GLSSME
Trigger: CTCCATACTGCTGAGGCCTCAGGACTGCTGCTCAGC...TTCTCTGTGATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp TCAAGGGACTCAGACATCATAGAAGAGTCGAACGAGCTGATATCGAATGGAGAAAGAAGGCCCACATGGTaGCCGGTCAGGGGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: SRDSDIIEESNELISNGERRPTW*PVRGPA
Trigger: AGCCGGGCCCCTGACCGGTCACCATGTGGGCCTTCT...TTCTCCATTCGATATCAGCTCGTTCGACTCTTCTATGATGTCTGAGTCCCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640747.1
CDS-3UTR TCA 90 bp TCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAATGTGAGTGTAGAAGGCCCACATGGTaGCCGGTCAGGGGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: SIPKTSGSLRVRTLKCECRRPTW*PVRGPA
Trigger: AGCCGGGCCCCTGACCGGTCACCATGTGGGCCTTCT...ACACTCACATTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp GCGCAGATTCAGTACATCATCCGCAAAGCCCAGGAAGATCATGCAGCAGATGGCGCGAGACGATCAAATTaGTCAGCAGCGGCATGGGCA +
Preference number: 4 (lower is better)
Translates to: AQIQYIIRKAQEDHAADGARRSN*SAAAWA
Trigger: TGCCCATGCCGCTGCTGATCAATTTGATCGTCTCGC...GCCATCTGCTGCATGATCTTCCTGGGCTTTGCGGATGATGTACTGAATCTGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392834.7
ENST00000414373.5
CDS-3UTR TCA 90 bp AGGAATCCTAGAGACTGTGAGGTAAAGGACAATGATCAAGGGACTCAGACATCAAGAGGCGCGCAGCAATaGAGTGGCCCCGGAAGGCCG +
Preference number: 4 (lower is better)
Translates to: RNPRDCEVKDNDQGTQTSRGAQQ*SGPGRP
Trigger: CGGCCTTCCGGGGCCACTTCATTGCTGCGCGCCTCT...TGATGTCTGAGTCCCTTGATCATTGTCCTTTACCTCACAGTCTCTAGGATTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640747.1
CDS-3UTR TCA 90 bp AGCAAGTTGCAGAAAGCCATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAAGAGGCGCGCAGCAATaGAGTGGCCCCGGAAGGCCG +
Preference number: 4 (lower is better)
Translates to: SKLQKAIGKIQSVVSRGQRGAQQ*SGPGRP
Trigger: CGGCCTTCCGGGGCCACTTCATTGCTGCGCGCCTCT...TTGCCCTCTGCTGACTACTGATTGGATTTTACCTATGGCTTTCTGCAACTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp CAAGATGCCCACCACGGCAAAGGTCATGCCAGCAAAGTAACAGAAGGTATCTCCGTTTTGTTGAGGTCCTaGCCACAGAGGCGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: QDAHHGKGHASKVTEGISVLLRS*PQRRAA
Trigger: TGCTGCGCGCCTCTGTGGTCAGGACCTCAACAAAAC...GGAGATACCTTCTGTTACTTTGCTGGCATGACCTTTGCCGTGGTGGGCATCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000640102.1
ENST00000640747.1
CDS-3UTR TCA 90 bp CAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCACAGAGGTCGGCTGGTTTTGTTaGGGTCCTGACCACAGAGGC +
Preference number: 4 (lower is better)
Translates to: QSVVSRGQETPRMPMITEVGWFC*GPDHRG
Trigger: GCCTCTGTGGTCAGGACCTCAACAAAACCAGCCGAC...CTCTGTGATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp TGGGGCATGAAGAATAGTAGCATGGTCTTGCTGAAGTGTCCCAAGATGCCCACCGTCGGCTGGTTTTGTTaGGGTCCTGACCACAGAGGC +
Preference number: 4 (lower is better)
Translates to: WGMKNSSMVLLKCPKMPTVGWFC*GPDHRG
Trigger: GCCTCTGTGGTCAGGACCTCAACAAAACCAGCCGAC...GGTGGGCATCTTGGGACACTTCAGCAAGACCATGCTACTATTCTTCATGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000640102.1
ENST00000640747.1
CDS-3UTR TCA 90 bp TGCCAGCAGCCCCATGTAGACATAGTACAGGATTCCCAAGTCCAGATGCAGGCCGTAGCATGGTCTTGCTaGAGTGTCCCAAGATGCCCA +
Preference number: 4 (lower is better)
Translates to: CQQPHVDIVQDSQVQMQAVAWSC*SVPRCP
Trigger: TGGGCATCTTGGGACACTTCAGCAAGACCATGCTAC...GGCCTGCATCTGGACTTGGGAATCCTGTACTATGTCTACATGGGGCTGCTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000640102.1
ENST00000640747.1
CDS-3UTR TCA 90 bp GACATAGTACAGGATTCCCAAGTCCAGATGCAGGCCAAGTATCGGGCGGAAGGGCAGGAGCTGAGGCAGTaGGTAGAGGAAGTTGAACAC +
Preference number: 4 (lower is better)
Translates to: DIVQDSQVQMQAKYRAEGQELRQ*VEEVEH
Trigger: GTGTTCAACTTCCTCTACTCACTGCCTCAGCTCCTG...CCCTTCCGCCCGATACTTGGCCTGCATCTGGACTTGGGAATCCTGTACTATGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000640102.1
ENST00000640747.1
CDS-3UTR TCA 90 bp AAAGCCATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGGGCGAGGGCAGGGGATaGTATGCAGGAGCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: KAIGKIQSVVSRGQETPRGEGRG*YAGAEA
Trigger: TGCCTCAGCTCCTGCATATCATCCCCTGCCCTCGCC...CCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTTACCTATGGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp AGATGCAGGCCAAGTATCGGGCGGAAGGGCTTGGGCACCACAATGGTCGTGTTGAAGAGTCGAACGAGCTaGTATCGAATGGAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: RCRPSIGRKGLGTTMVVLKSRTS*YRMEKV
Trigger: CACCTTCTCCATTCGATATCAGCTCGTTCGACTCTT...CAACACGACCATTGTGGTGCCCAAGCCCTTCCGCCCGATACTTGGCCTGCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640747.1
CDS-3UTR TCA 90 bp TGGTGTACTGTCACCAGCTGGAGGCTCTCTGCCACCAGTTGTGGTAGAGCAATCAGAGAGAGGTCAGCCTaGGTCAGGAATCCTAGAGAC +
Preference number: 4 (lower is better)
Translates to: WCTVTSWRLSATSCGRAIRERSA*VRNPRD
Trigger: GTCTCTAGGATTCCTGACTCAGGCTGACCTCTCTCT...GATTGCTCTACCACAACTGGTGGCAGAGAGCCTCCAGCTGGTGACAGTACACCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414373.5
CDS-3UTR TCA 90 bp TGGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAATTCCAGGGGAGGGACTaGCTGCTCGTGCTAGGAGGC +
Preference number: 4 (lower is better)
Translates to: WPKFYPKNQWFLESQDSEFQGRD*LLVLGG
Trigger: GCCTCCTAGCACGAGCAGTCAGTCCCTCCCCTGGAA...TTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR GCA 90 bp AGTACAGGATTCCCAAGTCCAGATGCAGGCCAAGTATCGGGCGGAAGGGCTTGGATTGGTACAGAACACTaGCAGCAGCCCCATGTAGAC +
Preference number: 4 (lower is better)
Translates to: STGFPSPDAGQVSGGRAWIGTEH*QQPHVD
Trigger: GTCTACATGGGGCTGCTGGCAGTGTTCTGTACCAAT...CCAAGCCCTTCCGCCCGATACTTGGCCTGCATCTGGACTTGGGAATCCTGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
CDS-3UTR GCA 90 bp CAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCACAGAGCTGAACGAGCAGGCCTaGAGAAACGGGGTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: QSVVSRGQETPRMPMITELNEQA*RNGVSW
Trigger: CCAACTCACCCCGTTTCTGCAGGCCTGCTCGTTCAG...CTCTGTGATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR GCA 90 bp TGGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAACTGGCTGCTGCAATATaGCCGGGGCTTGTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: WPKFYPKNQWFLESQDSELAAAI*PGLVAG
Trigger: GCCAGCCACAAGCCCCGGGCATATTGCAGCAGCCAG...TTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR GCA 90 bp CCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAATGTCTTCGCCGCCTCGCTaGTCACGGTGTTCGCCTGGC +
Preference number: 4 (lower is better)
Translates to: PKFYPKNQWFLESQDSEMSSPPR*SRCSPG
Trigger: GCCAGGCGAACACCGTGAGCAGCGAGGCGGCGAAGA...CATTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR CCA 90 bp AAAGCCATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGCTCAGCAGTATGGAGTaGCCGCTCCCCACAGGCAGG +
Preference number: 4 (lower is better)
Translates to: KAIGKIQSVVSRGQETPRLSSME*PLPTGR
Trigger: CCTGCCTGTGGGGAGCGGCCACTCCATACTGCTGAG...CCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTTACCTATGGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CCA 90 bp GGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAAGAGGCCTCAGCAGTATaGAGTGGCCGCTCCCCACAG +
Preference number: 4 (lower is better)
Translates to: GPSSIPKTSGSLRVRTLKEASAV*SGRSPQ
Trigger: CTGTGGGGAGCGGCCACTCCATACTGCTGAGGCCTC...TTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CCA 90 bp ATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAGAGGCCTCAGCAGTATaGAGTGGCCGCTCCCCACAG +
Preference number: 4 (lower is better)
Translates to: IGKIQSVVSRGQETPRMPEASAV*SGRSPQ
Trigger: CTGTGGGGAGCGGCCACTCCATACTGCTGAGGCCTC...TGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTTACCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CCA 90 bp GAGTCGAACGAGCTGATATCGAATGGAGAAGGTGATGGCACTGCCCAGGATCTGGGTAGCAGCAGCTTATaGCGCCAGCGCAGATTCAGT +
Preference number: 4 (lower is better)
Translates to: ESNELISNGEGDGTAQDLGSSSL*RQRRFS
Trigger: ACTGAATCTGCGCTGGCGCCATAAGCTGCTGCTACC...CAGATCCTGGGCAGTGCCATCACCTTCTCCATTCGATATCAGCTCGTTCGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000442480.1
ENST00000640747.1
CDS-3UTR CCA 90 bp ATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCACAGAGAATCGGGCGGAAGGGCTTaGGCACCACAATGGTCGTGT +
Preference number: 4 (lower is better)
Translates to: ISSQQRARNAQDANDHRESGGRA*APQWSC
Trigger: ACACGACCATTGTGGTGCCCAAGCCCTTCCGCCCGA...TTCTCTGTGATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CCA 90 bp TCAGAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTTCCTAGCCCGCGCGGAGCATaGATCCGGGCTGGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: SEHLIYNQMTCHRGACVPSPRGA*IRAGGS
Trigger: GCTGCCCCCAGCCCGGATCCATGCTCCGCGCGGGCT...AGGAACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR CCA 90 bp ATAGAAGAGTCGAACGAGCTGATATCGAATGGAGAAGGTGATGGCACTGCCCAGGGAGGGACGAGGGTGTaGAGACGCGCCTGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: IEESNELISNGEGDGTAQGGTRV*RRACFL
Trigger: CAAGAAACAGGCGCGTCTCCACACCCTCGTCCCTCC...CTGGGCAGTGCCATCACCTTCTCCATTCGATATCAGCTCGTTCGACTCTTCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442480.1
CDS-3UTR CCA 90 bp TCGAACGAGCTGATATCGAATGGAGAAGGTGATGGCACTGCCCAGGATCTGCAGAACTCTCCCTTAATCTaGGATGCCTCCGGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SNELISNGEGDGTAQDLQNSPLI*DASGSR
Trigger: CCTGGAGCCGGAGGCATCCCAGATTAAGGGAGAGTT...CTGCAGATCCTGGGCAGTGCCATCACCTTCTCCATTCGATATCAGCTCGTTCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442480.1
CDS-3UTR TCA 90 bp TCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAATGTGAGTGTCCAGCAACTCTGACTTaGGCCGCCGTCGGGACACCG +
Preference number: 4 (lower is better)
Translates to: SIPKTSGSLRVRTLKCECPATLT*AAVGTP
Trigger: CGGTGTCCCGACGGCGGCTCAAGTCAGAGTTGCTGG...ACACTCACATTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp AGAACACTGCCAGCAGCCCCATGTAGACATAGTACAGGATTCCCAAGTCCAGATAAAACCCAGCAACTCTaGCTTGAGCCGCCGTCGGGA +
Preference number: 4 (lower is better)
Translates to: RTLPAAPCRHSTGFPSPDKTQQL*LEPPSG
Trigger: TCCCGACGGCGGCTCAAGTCAGAGTTGCTGGGTTTT...ATCTGGACTTGGGAATCCTGTACTATGTCTACATGGGGCTGCTGGCAGTGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
CDS-3UTR TCA 90 bp GTTCCTAGCCCTGGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCGCGAGACGATCAAATTaGTCAGCAGCGGCATGGGCA +
Preference number: 4 (lower is better)
Translates to: VPSPGPSSIPKTSGSLRVARRSN*SAAAWA
Trigger: TGCCCATGCCGCTGCTGATCAATTTGATCGTCTCGC...GACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCCAGGGCTAGGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp GAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTTCCTAGCAGAGGCGCGCAGCAATaGAGTGGCCCCGGAAGGCCG +
Preference number: 4 (lower is better)
Translates to: EHLIYNQMTCHRGACVPSRGAQQ*SGPGRP
Trigger: CGGCCTTCCGGGGCCACTTCATTGCTGCGCGCCTCT...GCTAGGAACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
CDS-3UTR TCA 90 bp AGGGACTCAGACATCATAGAAGAGTCGAACGAGCTGATATCGAATGGAGAAGGTGGCGAGGGCAGGGGATaGTATGCAGGAGCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: RDSDIIEESNELISNGEGGEGRG*YAGAEA
Trigger: TGCCTCAGCTCCTGCATATCATCCCCTGCCCTCGCC...ACCTTCTCCATTCGATATCAGCTCGTTCGACTCTTCTATGATGTCTGAGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000442480.1
ENST00000638850.1
ENST00000640747.1
CDS-3UTR TCA 90 bp TTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTTCCTAGCCCTGGCGGCGAGGGCAGGGGATaGTATGCAGGAGCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: LIYNQMTCHRGACVPSPGGEGRG*YAGAEA
Trigger: TGCCTCAGCTCCTGCATATCATCCCCTGCCCTCGCC...GCCAGGGCTAGGAACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
CDS-3UTR TCA 90 bp TCAGACATCATAGAAGAGTCGAACGAGCTGATATCGAATGGAGAAGGTGATGGCGGCGAGGGCAGGGGATaGTATGCAGGAGCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: SDIIEESNELISNGEGDGGEGRG*YAGAEA
Trigger: TGCCTCAGCTCCTGCATATCATCCCCTGCCCTCGCC...GCCATCACCTTCTCCATTCGATATCAGCTCGTTCGACTCTTCTATGATGTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000442480.1
ENST00000638850.1
ENST00000640747.1
CDS-3UTR TCA 90 bp GGCCAAGTATCGGGCGGAAGGGCTTGGGCACCACAATGGTCGTGTTGCCAAAGTAGAGGCTCTTGGTCTTaGACTTGGAATAGCTCATCT +
Preference number: 4 (lower is better)
Translates to: GQVSGGRAWAPQWSCCQSRGSWS*TWNSSS
Trigger: AGATGAGCTATTCCAAGTTCAAGACCAAGAGCCTCT...ACTTTGGCAACACGACCATTGTGGTGCCCAAGCCCTTCCGCCCGATACTTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000640102.1
ENST00000640747.1
CDS-3UTR TCA 90 bp TCGAACGAGCTGATATCGAATGGAGAAGGTGATGGCACTGCCCAGGATCTGCAGAGAGAGAGGTCAGCCTaGGTCAGGAATCCTAGAGAC +
Preference number: 4 (lower is better)
Translates to: SNELISNGEGDGTAQDLQRERSA*VRNPRD
Trigger: GTCTCTAGGATTCCTGACTCAGGCTGACCTCTCTCT...CTGCAGATCCTGGGCAGTGCCATCACCTTCTCCATTCGATATCAGCTCGTTCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000638850.1
ENST00000640747.1
CDS-3UTR TCA 90 bp GACATAGTACAGGATTCCCAAGTCCAGATGCAGGCCAAGTATCGGGCGGAAGGGAAATCTGGAGGAGTATaGAGAGTGAGAGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: DIVQDSQVQMQAKYRAEGKSGGV*RVREAW
Trigger: CCAGGCCTCTCTCACTCTTCATACTCCTCCAGATTT...CCCTTCCGCCCGATACTTGGCCTGCATCTGGACTTGGGAATCCTGTACTATGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640747.1
CDS-3UTR TCA 90 bp AAAGCCATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGCCTGCAGAAACGGGGTaGGTTGGACCAAGCGCTTGG +
Preference number: 4 (lower is better)
Translates to: KAIGKIQSVVSRGQETPRPAETG*VGPSAW
Trigger: CCAAGCGCTTGGTCCAACTCACCCCGTTTCTGCAGG...CCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTTACCTATGGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR TCA 90 bp AGCTGGAGGCTCTCTGCCACCTTTAAAATAAAGGTGCCCAAGAAAGAGAGGCTCCAGGAAGATGGCTATTaGAAGGCAGGGGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: SWRLSATFKIKVPKKERLQEDGY*KAGGGE
Trigger: CTCCCCACCCCCTGCCTTTCAATAGCCATCTTCCTG...GAGCCTCTCTTTCTTGGGCACCTTTATTTTAAAGGTGGCAGAGAGCCTCCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442480.1
CDS-3UTR GCA 90 bp CAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCACAGAGATTCCCAAGTCCAGATaGAGGCCAAGTATCGGGCGG +
Preference number: 4 (lower is better)
Translates to: QSVVSRGQETPRMPMITEIPKSR*RPSIGR
Trigger: CCGCCCGATACTTGGCCTGCATCTGGACTTGGGAAT...CTCTGTGATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR GCA 90 bp GTTCCTAGCCCTGGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCATTCCCAAGTCCAGATaGAGGCCAAGTATCGGGCGG +
Preference number: 4 (lower is better)
Translates to: VPSPGPSSIPKTSGSLRVIPKSR*RPSIGR
Trigger: CCGCCCGATACTTGGCCTGCATCTGGACTTGGGAAT...GACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCCAGGGCTAGGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR GCA 90 bp TATCGGGCGGAAGGGCTTGGGCACCACAATGGTCGTGTTGCCAAAGTTGGTGAACCACGGCAAAGGTCATaGCAGCAAAGTAACAGAAGG +
Preference number: 4 (lower is better)
Translates to: YRAEGLGHHNGRVAKVGEPRQRS*QQSNRR
Trigger: CCTTCTGTTACTTTGCTGGCATGACCTTTGCCGTGG...TTCACCAACTTTGGCAACACGACCATTGTGGTGCCCAAGCCCTTCCGCCCGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000640102.1
ENST00000640747.1
CDS-3UTR GCA 90 bp GCAGCTGTAGGTAGCAGCAGCTTATGGCGCCAGCGCAGATTCAGTACATCATCCCCACGGCAAAGGTCATaGCAGCAAAGTAACAGAAGG +
Preference number: 4 (lower is better)
Translates to: AAVGSSSLWRQRRFSTSSPRQRS*QQSNRR
Trigger: CCTTCTGTTACTTTGCTGGCATGACCTTTGCCGTGG...GGATGATGTACTGAATCTGCGCTGGCGCCATAAGCTGCTGCTACCTACAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392834.7
ENST00000640747.1
CDS-3UTR GCA 90 bp CTAATCAGAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTGCGTGTGGCGCTCGCTaGTGCGGCTGCGGGCGACTC +
Preference number: 4 (lower is better)
Translates to: LIRTLNLQSNDMSPWSLCACGAR*CGCGRL
Trigger: GAGTCGCCCGCAGCCGCAGCAGCGAGCGCCACACGC...ACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTCTGATTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR GCA 90 bp TCAGAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTTCCTAACCCGCGGGTTCCCTaGGGGAGCTGGGCGTGTGGC +
Preference number: 4 (lower is better)
Translates to: SEHLIYNQMTCHRGACVPNPRVP*GSWACG
Trigger: GCCACACGCCCAGCTCCCGCAGGGAACCCGCGGGTT...AGGAACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR CCA 90 bp CCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAATGCTCAGCAGTATGGAGTaGCCGCTCCCCACAGGCAGG +
Preference number: 4 (lower is better)
Translates to: PKFYPKNQWFLESQDSEMLSSME*PLPTGR
Trigger: CCTGCCTGTGGGGAGCGGCCACTCCATACTGCTGAG...CATTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CCA 90 bp AGTAGAGGGAAAAGACATGATCATCCCGACAATCACCTTCCAACTCTACCAGGTCTCAGCAGTATGGAGTaGCCGCTCCCCACAGGCAGG +
Preference number: 4 (lower is better)
Translates to: SRGKRHDHPDNHLPTLPGLSSME*PLPTGR
Trigger: CCTGCCTGTGGGGAGCGGCCACTCCATACTGCTGAG...ACCTGGTAGAGTTGGAAGGTGATTGTCGGGATGATCATGTCTTTTCCCTCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
CDS-3UTR CCA 90 bp CACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTTCCTAGCCCTCGCGCAGCAATGAAGTaGCCCCGGAAGGCCGGGATG +
Preference number: 4 (lower is better)
Translates to: HLIYNQMTCHRGACVPSPRAAMK*PRKAGM
Trigger: CATCCCGGCCTTCCGGGGCCACTTCATTGCTGCGCG...AGGGCTAGGAACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
CDS-3UTR CCA 90 bp GGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAATCGGGCGGAAGGGCTTaGGCACCACAATGGTCGTGT +
Preference number: 4 (lower is better)
Translates to: GPSSIPKTSGSLRVRTLKSGGRA*APQWSC
Trigger: ACACGACCATTGTGGTGCCCAAGCCCTTCCGCCCGA...TTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CCA 90 bp ATGACTAGTGACTGGCCAGCCTCTAGGCCGTTAATTCCTGCTAGGATATTGATGTCGGGCGGAAGGGCTTaGGCACCACAATGGTCGTGT +
Preference number: 4 (lower is better)
Translates to: MTSDWPASRPLIPARILMSGGRA*APQWSC
Trigger: ACACGACCATTGTGGTGCCCAAGCCCTTCCGCCCGA...CATCAATATCCTAGCAGGAATTAACGGCCTAGAGGCTGGCCAGTCACTAGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
CDS-3UTR CCA 90 bp TGGCCAGCCTCTAGGCCGTTAATTCCTGCTAGGATATTGATGGCATTGGTACAGAGTCTGGGTATGCGGTaGCGAGGGCAGGGGATGATA +
Preference number: 4 (lower is better)
Translates to: WPASRPLIPARILMALVQSLGMR*RGQGMI
Trigger: TATCATCCCCTGCCCTCGCCACCGCATACCCAGACT...CTGTACCAATGCCATCAATATCCTAGCAGGAATTAACGGCCTAGAGGCTGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000640102.1
ENST00000640747.1
CDS-3UTR CCA 90 bp TCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAATGTGAGTGTCCTCTCCTCGCCCTGTaGCACCCACTAGTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: SIPKTSGSLRVRTLKCECPLLAL*HPLVLG
Trigger: GCCCAGGACTAGTGGGTGCCACAGGGCGAGGAGAGG...ACACTCACATTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR TCA 90 bp CCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAATGGCTGAGCAGCAGTCCTaGGGCCTCAGCAGTATGGAG +
Preference number: 4 (lower is better)
Translates to: PKFYPKNQWFLESQDSEMAEQQS*GLSSME
Trigger: CTCCATACTGCTGAGGCCTCAGGACTGCTGCTCAGC...CATTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp CTCTGGTGTACTGTCACCAGCTGGAGGCTCTCTGCCACCTTTAAAATAAAGGTGGCGAGACGATCAAATTaGTCAGCAGCGGCATGGGCA +
Preference number: 4 (lower is better)
Translates to: LWCTVTSWRLSATFKIKVARRSN*SAAAWA
Trigger: TGCCCATGCCGCTGCTGATCAATTTGATCGTCTCGC...CACCTTTATTTTAAAGGTGGCAGAGAGCCTCCAGCTGGTGACAGTACACCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000640102.1
ENST00000640747.1
CDS-3UTR TCA 90 bp GGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAAGTTTTGTTGAGGTCCTaGCCACAGAGGCGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: GPSSIPKTSGSLRVRTLKVLLRS*PQRRAA
Trigger: TGCTGCGCGCCTCTGTGGTCAGGACCTCAACAAAAC...TTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp AAAGCCATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGGTCGGCTGGTTTTGTTaGGGTCCTGACCACAGAGGC +
Preference number: 4 (lower is better)
Translates to: KAIGKIQSVVSRGQETPRVGWFC*GPDHRG
Trigger: GCCTCTGTGGTCAGGACCTCAACAAAACCAGCCGAC...CCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTTACCTATGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp GGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAAGTCGGCTGGTTTTGTTaGGGTCCTGACCACAGAGGC +
Preference number: 4 (lower is better)
Translates to: GPSSIPKTSGSLRVRTLKVGWFC*GPDHRG
Trigger: GCCTCTGTGGTCAGGACCTCAACAAAACCAGCCGAC...TTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp ACAGAACACTGCCAGCAGCCCCATGTAGACATAGTACAGGATTCCCAAGTCCAGTCCCACAAACACCCGTaGTGGGTACCAGTTGTGGTA +
Preference number: 4 (lower is better)
Translates to: TEHCQQPHVDIVQDSQVQSHKHP*WVPVVV
Trigger: TACCACAACTGGTACCCATCACGGGTGTTTGTGGGA...CTGGACTTGGGAATCCTGTACTATGTCTACATGGGGCTGCTGGCAGTGTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000640102.1
ENST00000640747.1
CDS-3UTR TCA 90 bp CAGTCTCACTCTGGTGTACTGTCACCAGCTGGAGGCTCTCTGCCACCTTTAAAACAGGAGCTGAGGCAGTaGGTAGAGGAAGTTGAACAC +
Preference number: 4 (lower is better)
Translates to: QSHSGVLSPAGGSLPPLKQELRQ*VEEVEH
Trigger: GTGTTCAACTTCCTCTACTCACTGCCTCAGCTCCTG...TTTTAAAGGTGGCAGAGAGCCTCCAGCTGGTGACAGTACACCAGAGTGAGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000442480.1
ENST00000640102.1
ENST00000640747.1
CDS-3UTR TCA 90 bp TGGGGCATGAAGAATAGTAGCATGGTCTTGCTGAAGTGTCCCAAGATGCCCACCCAGGAGCTGAGGCAGTaGGTAGAGGAAGTTGAACAC +
Preference number: 4 (lower is better)
Translates to: WGMKNSSMVLLKCPKMPTQELRQ*VEEVEH
Trigger: GTGTTCAACTTCCTCTACTCACTGCCTCAGCTCCTG...GGTGGGCATCTTGGGACACTTCAGCAAGACCATGCTACTATTCTTCATGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000640102.1
ENST00000640747.1
CDS-3UTR TCA 90 bp GAAGAGTCGAACGAGCTGATATCGAATGGAGAAGGTGATGGCACTGCCCAGGATCAGGAGCTGAGGCAGTaGGTAGAGGAAGTTGAACAC +
Preference number: 4 (lower is better)
Translates to: EESNELISNGEGDGTAQDQELRQ*VEEVEH
Trigger: GTGTTCAACTTCCTCTACTCACTGCCTCAGCTCCTG...ATCCTGGGCAGTGCCATCACCTTCTCCATTCGATATCAGCTCGTTCGACTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000442480.1
ENST00000638850.1
ENST00000640747.1
CDS-3UTR TCA 90 bp CGGCAAAGGTCATGCCAGCAAAGTAACAGAAGGTATCTCCCACAAACACCCGTGCTGTATCCCACCCTATaGGGCTGCAAAGATGGGATG +
Preference number: 4 (lower is better)
Translates to: RQRSCQQSNRRYLPQTPVLYPTL*GCKDGM
Trigger: CATCCCATCTTTGCAGCCTCATAGGGTGGGATACAG...CACGGGTGTTTGTGGGAGATACCTTCTGTTACTTTGCTGGCATGACCTTTGCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392834.7
ENST00000640747.1
CDS-3UTR TCA 90 bp CAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCACAGAGCTGTATCCCACCCTATaGGGCTGCAAAGATGGGATG +
Preference number: 4 (lower is better)
Translates to: QSVVSRGQETPRMPMITELYPTL*GCKDGM
Trigger: CATCCCATCTTTGCAGCCTCATAGGGTGGGATACAG...CTCTGTGATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR GCA 90 bp ATGGCGCCAGCGCAGATTCAGTACATCATCCGCAAAGCCCAGGAAGATCATGCATGGGATTCTGGGATCTaGTGTCGGCTGGTTTTGTTG +
Preference number: 4 (lower is better)
Translates to: MAPAQIQYIIRKAQEDHAWDSGI*CRLVLL
Trigger: CAACAAAACCAGCCGACAGCAGATCCCAGAATCCCA...TGCATGATCTTCCTGGGCTTTGCGGATGATGTACTGAATCTGCGCTGGCGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414373.5
CDS-3UTR GCA 90 bp TATCGGGCGGAAGGGCTTGGGCACCACAATGGTCGTGTTGCCAAAGTTGGTGAAGGGAATGCCTTACACTaGTCCTTCACAAAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: YRAEGLGHHNGRVAKVGEGNALH*SFTKQF
Trigger: GAACTGCTTTGTGAAGGAGCAGTGTAAGGCATTCCC...TTCACCAACTTTGGCAACACGACCATTGTGGTGCCCAAGCCCTTCCGCCCGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414373.5
ENST00000640747.1
CDS-3UTR CCA 90 bp TCAAGGGACTCAGACATCATAGAAGAGTCGAACGAGCTGATATCGAATGGAGAAGAGGCCTCAGCAGTATaGAGTGGCCGCTCCCCACAG +
Preference number: 4 (lower is better)
Translates to: SRDSDIIEESNELISNGEEASAV*SGRSPQ
Trigger: CTGTGGGGAGCGGCCACTCCATACTGCTGAGGCCTC...TTCTCCATTCGATATCAGCTCGTTCGACTCTTCTATGATGTCTGAGTCCCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640747.1
CDS-3UTR CCA 90 bp GAGAGTAGCAAGTTGCAGAAAGCCATAGGTAAAATCCAATCAGTAGTCAGCAGACGCGCAGCAATGAAGTaGCCCCGGAAGGCCGGGATG +
Preference number: 4 (lower is better)
Translates to: ESSKLQKAIGKIQSVVSRRAAMK*PRKAGM
Trigger: CATCCCGGCCTTCCGGGGCCACTTCATTGCTGCGCG...TCTGCTGACTACTGATTGGATTTTACCTATGGCTTTCTGCAACTTGCTACTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CCA 90 bp AAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCCACTCCCTGGGATTCTaGGATCTGCTGTCGGCTGGT +
Preference number: 4 (lower is better)
Translates to: KIQSVVSRGQETPRMPMIHSLGF*DLLSAG
Trigger: ACCAGCCGACAGCAGATCCCAGAATCCCAGGGAGTG...GATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354202.9
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CCA 90 bp ATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCACACTCCCTGGGATTCTaGGATCTGCTGTCGGCTGGT +
Preference number: 4 (lower is better)
Translates to: IGKIQSVVSRGQETPRMPHSLGF*DLLSAG
Trigger: ACCAGCCGACAGCAGATCCCAGAATCCCAGGGAGTG...TGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTTACCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354202.9
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CCA 90 bp GGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAACACTCCCTGGGATTCTaGGATCTGCTGTCGGCTGGT +
Preference number: 4 (lower is better)
Translates to: GPSSIPKTSGSLRVRTLKHSLGF*DLLSAG
Trigger: ACCAGCCGACAGCAGATCCCAGAATCCCAGGGAGTG...TTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354202.9
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CCA 90 bp AGCTGGAGGCTCTCTGCCACCTTTAAAATAAAGGTGCCCAAGAAAGAGAGGCTCGGTAGCAGCAGCTTATaGCGCCAGCGCAGATTCAGT +
Preference number: 4 (lower is better)
Translates to: SWRLSATFKIKVPKKERLGSSSL*RQRRFS
Trigger: ACTGAATCTGCGCTGGCGCCATAAGCTGCTGCTACC...GAGCCTCTCTTTCTTGGGCACCTTTATTTTAAAGGTGGCAGAGAGCCTCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000442480.1
ENST00000640102.1
ENST00000640747.1
CDS-3UTR CCA 90 bp ATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCACAGAGAAGGTAGCAGCAGCTTATaGCGCCAGCGCAGATTCAGT +
Preference number: 4 (lower is better)
Translates to: ISSQQRARNAQDANDHREGSSSL*RQRRFS
Trigger: ACTGAATCTGCGCTGGCGCCATAAGCTGCTGCTACC...TTCTCTGTGATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000640747.1
CDS-3UTR CCA 90 bp GAAGAGTCGAACGAGCTGATATCGAATGGAGAAGGTGATGGCACTGCCCAGGATGCTTGGGCACCACAATaGTCGTGTTGCCAAAGTTGG +
Preference number: 4 (lower is better)
Translates to: EESNELISNGEGDGTAQDAWAPQ*SCCQSW
Trigger: CCAACTTTGGCAACACGACCATTGTGGTGCCCAAGC...ATCCTGGGCAGTGCCATCACCTTCTCCATTCGATATCAGCTCGTTCGACTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000442480.1
ENST00000640747.1
CDS-3UTR CCA 90 bp AAGACAATGATGGAAGCAGAAATGACTAGTGACTGGCCAGCCTCTAGGCCGTTAAGTCTGGGTATGCGGTaGCGAGGGCAGGGGATGATA +
Preference number: 4 (lower is better)
Translates to: KTMMEAEMTSDWPASRPLSLGMR*RGQGMI
Trigger: TATCATCCCCTGCCCTCGCCACCGCATACCCAGACT...TAACGGCCTAGAGGCTGGCCAGTCACTAGTCATTTCTGCTTCCATCATTGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000640102.1
ENST00000640747.1
CDS-3UTR CCA 90 bp GGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAAAGTCTGGGTATGCGGTaGCGAGGGCAGGGGATGATA +
Preference number: 4 (lower is better)
Translates to: GPSSIPKTSGSLRVRTLKSLGMR*RGQGMI
Trigger: TATCATCCCCTGCCCTCGCCACCGCATACCCAGACT...TTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CCA 90 bp AAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCAGTCTGGGTATGCGGTaGCGAGGGCAGGGGATGATA +
Preference number: 4 (lower is better)
Translates to: KIQSVVSRGQETPRMPMISLGMR*RGQGMI
Trigger: TATCATCCCCTGCCCTCGCCACCGCATACCCAGACT...GATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CCA 90 bp TGGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAAGTCTGGGTATGCGGTaGCGAGGGCAGGGGATGATA +
Preference number: 4 (lower is better)
Translates to: WPKFYPKNQWFLESQDSESLGMR*RGQGMI
Trigger: TATCATCCCCTGCCCTCGCCACCGCATACCCAGACT...TTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CCA 90 bp TTACTAATCAGAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGCGGGAGCTGGGCGTGTaGCGCTCGCTGCTGCGGCTG +
Preference number: 4 (lower is better)
Translates to: LLIRTLNLQSNDMSPWSLRELGV*RSLLRL
Trigger: CAGCCGCAGCAGCGAGCGCCACACGCCCAGCTCCCG...CAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTCTGATTAGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR CCA 90 bp TGGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAACCGGCTCCAGGAAGATaGCTATTGAAAGGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: WPKFYPKNQWFLESQDSEPAPGR*LLKGRG
Trigger: CCCCCTGCCTTTCAATAGCCATCTTCCTGGAGCCGG...TTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR CCA 90 bp TCACTCTGGTGTACTGTCACCAGCTGGAGGCTCTCTGCCACCTTTAAAATAAAGCCGGCTCCAGGAAGATaGCTATTGAAAGGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: SLWCTVTSWRLSATFKIKPAPGR*LLKGRG
Trigger: CCCCCTGCCTTTCAATAGCCATCTTCCTGGAGCCGG...CTTTATTTTAAAGGTGGCAGAGAGCCTCCAGCTGGTGACAGTACACCAGAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442480.1
CDS-3UTR CCA 90 bp ATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCACAGAGAAGAGGGCACTTCATGGTaGGGGAATGCCTTACACTGC +
Preference number: 4 (lower is better)
Translates to: ISSQQRARNAQDANDHREEGTSW*GNALHC
Trigger: GCAGTGTAAGGCATTCCCCCACCATGAAGTGCCCTC...TTCTCTGTGATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640747.1
CDS-3UTR TCA 90 bp CAAGTTGATGAGGGTCATGTTGTTACATTCAGTGAATTCACCATCTTCAGTCTCCCAGCAACTCTGACTTaGGCCGCCGTCGGGACACCG +
Preference number: 4 (lower is better)
Translates to: QVDEGHVVTFSEFTIFSLPATLT*AAVGTP
Trigger: CGGTGTCCCGACGGCGGCTCAAGTCAGAGTTGCTGG...GAGACTGAAGATGGTGAATTCACTGAATGTAACAACATGACCCTCATCAACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
CDS-3UTR TCA 90 bp AAAGCCATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGGCGAGACGATCAAATTaGTCAGCAGCGGCATGGGCA +
Preference number: 4 (lower is better)
Translates to: KAIGKIQSVVSRGQETPRARRSN*SAAAWA
Trigger: TGCCCATGCCGCTGCTGATCAATTTGATCGTCTCGC...CCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTTACCTATGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp CTCTCTGCCACCTTTAAAATAAAGGTGCCCAAGAAAGAGAGGCTCTTGGTCTTGGTTTTGTTGAGGTCCTaGCCACAGAGGCGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: LSATFKIKVPKKERLLVLVLLRS*PQRRAA
Trigger: TGCTGCGCGCCTCTGTGGTCAGGACCTCAACAAAAC...CAAGACCAAGAGCCTCTCTTTCTTGGGCACCTTTATTTTAAAGGTGGCAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000640102.1
ENST00000640747.1
CDS-3UTR TCA 90 bp TTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTTCCTAGCCCTGGCGTCGGCTGGTTTTGTTaGGGTCCTGACCACAGAGGC +
Preference number: 4 (lower is better)
Translates to: LIYNQMTCHRGACVPSPGVGWFC*GPDHRG
Trigger: GCCTCTGTGGTCAGGACCTCAACAAAACCAGCCGAC...GCCAGGGCTAGGAACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
CDS-3UTR TCA 90 bp TGGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAGGAAAACAGCACCGCTaGTCACTCCCTGGGATTCTG +
Preference number: 4 (lower is better)
Translates to: WPKFYPKNQWFLESQDSEGKQHR*SLPGIL
Trigger: CAGAATCCCAGGGAGTGATCAGCGGTGCTGTTTTCC...TTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354202.9
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp AGTACAGGATTCCCAAGTCCAGATGCAGGCCAAGTATCGGGCGGAAGGGCTTGGTTCCTGCTAGGATATTaGTGGCATTGGTACAGAACA +
Preference number: 4 (lower is better)
Translates to: STGFPSPDAGQVSGGRAWFLLGY*WHWYRT
Trigger: TGTTCTGTACCAATGCCATCAATATCCTAGCAGGAA...CCAAGCCCTTCCGCCCGATACTTGGCCTGCATCTGGACTTGGGAATCCTGTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
CDS-3UTR TCA 90 bp ATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCACAGAGAATCCCACAAACACCCGTaGTGGGTACCAGTTGTGGTA +
Preference number: 4 (lower is better)
Translates to: ISSQQRARNAQDANDHRESHKHP*WVPVVV
Trigger: TACCACAACTGGTACCCATCACGGGTGTTTGTGGGA...TTCTCTGTGATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp CTCTGGTGTACTGTCACCAGCTGGAGGCTCTCTGCCACCTTTAAAATAAAGGTGTCCCACAAACACCCGTaGTGGGTACCAGTTGTGGTA +
Preference number: 4 (lower is better)
Translates to: LWCTVTSWRLSATFKIKVSHKHP*WVPVVV
Trigger: TACCACAACTGGTACCCATCACGGGTGTTTGTGGGA...CACCTTTATTTTAAAGGTGGCAGAGAGCCTCCAGCTGGTGACAGTACACCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000640102.1
ENST00000640747.1
CDS-3UTR TCA 90 bp GCAGCTGTAGGTAGCAGCAGCTTATGGCGCCAGCGCAGATTCAGTACATCATCCAGAGGCTCTTGGTCTTaGACTTGGAATAGCTCATCT +
Preference number: 4 (lower is better)
Translates to: AAVGSSSLWRQRRFSTSSRGSWS*TWNSSS
Trigger: AGATGAGCTATTCCAAGTTCAAGACCAAGAGCCTCT...GGATGATGTACTGAATCTGCGCTGGCGCCATAAGCTGCTGCTACCTACAGCTGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392834.7
ENST00000640747.1
CDS-3UTR TCA 90 bp GCTGTATCCCACCCTATGAGGCTGCAAAGATGGGATGGAGAGGGAGAGAGTAGCAGAGGCTCTTGGTCTTaGACTTGGAATAGCTCATCT +
Preference number: 4 (lower is better)
Translates to: AVSHPMRLQRWDGEGESSRGSWS*TWNSSS
Trigger: AGATGAGCTATTCCAAGTTCAAGACCAAGAGCCTCT...GCTACTCTCTCCCTCTCCATCCCATCTTTGCAGCCTCATAGGGTGGGATACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp GAAGAGTCGAACGAGCTGATATCGAATGGAGAAGGTGATGGCACTGCCCAGGATGCAGCAGGAGCAATGTaGGGTTTCTCTCATGTATGG +
Preference number: 4 (lower is better)
Translates to: EESNELISNGEGDGTAQDAAGAM*GFSHVW
Trigger: CCATACATGAGAGAAACCTCACATTGCTCCTGCTGC...ATCCTGGGCAGTGCCATCACCTTCTCCATTCGATATCAGCTCGTTCGACTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000442480.1
ENST00000638850.1
ENST00000640747.1
CDS-3UTR TCA 90 bp CTCTGGTGTACTGTCACCAGCTGGAGGCTCTCTGCCACCTTTAAAATAAAGGTGAGAGAGAGGTCAGCCTaGGTCAGGAATCCTAGAGAC +
Preference number: 4 (lower is better)
Translates to: LWCTVTSWRLSATFKIKVRERSA*VRNPRD
Trigger: GTCTCTAGGATTCCTGACTCAGGCTGACCTCTCTCT...CACCTTTATTTTAAAGGTGGCAGAGAGCCTCCAGCTGGTGACAGTACACCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392834.7
ENST00000640747.1
CDS-3UTR TCA 90 bp ATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCACAGAGAACTGTATCCCACCCTATaGGGCTGCAAAGATGGGATG +
Preference number: 4 (lower is better)
Translates to: ISSQQRARNAQDANDHRELYPTL*GCKDGM
Trigger: CATCCCATCTTTGCAGCCTCATAGGGTGGGATACAG...TTCTCTGTGATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp CAGTCTCACTCTGGTGTACTGTCACCAGCTGGAGGCTCTCTGCCACCAGTTGTGCAGGACTCTGAAATGTaGGTGTGGATAACTGCAAAA +
Preference number: 4 (lower is better)
Translates to: QSHSGVLSPAGGSLPPVVQDSEM*VWITAK
Trigger: TTTTGCAGTTATCCACACTCACATTTCAGAGTCCTG...CACAACTGGTGGCAGAGAGCCTCCAGCTGGTGACAGTACACCAGAGTGAGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414373.5
CDS-3UTR GCA 90 bp CAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCACAGAGTGGGATTCTGGGATCTaGTGTCGGCTGGTTTTGTTG +
Preference number: 4 (lower is better)
Translates to: QSVVSRGQETPRMPMITEWDSGI*CRLVLL
Trigger: CAACAAAACCAGCCGACAGCAGATCCCAGAATCCCA...CTCTGTGATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354202.9
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR GCA 90 bp CAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCACAGAGTTCATGGTGGGGGAATaGCTTACACTGCTCCTTCAC +
Preference number: 4 (lower is better)
Translates to: QSVVSRGQETPRMPMITEFMVGE*LTLLLH
Trigger: GTGAAGGAGCAGTGTAAGGCATTCCCCCACCATGAA...CTCTGTGATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354202.9
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR GCA 90 bp GTTCCTAGCCCTGGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCATTGGTACAGAACACTaGCAGCAGCCCCATGTAGAC +
Preference number: 4 (lower is better)
Translates to: VPSPGPSSIPKTSGSLRVIGTEH*QQPHVD
Trigger: GTCTACATGGGGCTGCTGGCAGTGTTCTGTACCAAT...GACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCCAGGGCTAGGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR GCA 90 bp ACAGAACACTGCCAGCAGCCCCATGTAGACATAGTACAGGATTCCCAAGTCCAGATTGGTACAGAACACTaGCAGCAGCCCCATGTAGAC +
Preference number: 4 (lower is better)
Translates to: TEHCQQPHVDIVQDSQVQIGTEH*QQPHVD
Trigger: GTCTACATGGGGCTGCTGGCAGTGTTCTGTACCAAT...CTGGACTTGGGAATCCTGTACTATGTCTACATGGGGCTGCTGGCAGTGTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
CDS-3UTR CCA 90 bp ATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCACCGCTGATCACTCCCTaGGATTCTGGGATCTGCTGT +
Preference number: 4 (lower is better)
Translates to: IGKIQSVVSRGQETPRMPPLITP*DSGICC
Trigger: ACAGCAGATCCCAGAATCCCAGGGAGTGATCAGCGG...TGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTTACCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354202.9
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CCA 90 bp TGGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAACCGCTGATCACTCCCTaGGATTCTGGGATCTGCTGT +
Preference number: 4 (lower is better)
Translates to: WPKFYPKNQWFLESQDSEPLITP*DSGICC
Trigger: ACAGCAGATCCCAGAATCCCAGGGAGTGATCAGCGG...TTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354202.9
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CCA 90 bp CAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCACAGAGAGGGCCACAAATTCATaGTGGGGGAATGCCTTACAC +
Preference number: 4 (lower is better)
Translates to: QSVVSRGQETPRMPMITERATNS*WGNALH
Trigger: GTGTAAGGCATTCCCCCACCATGAATTTGTGGCCCT...CTCTGTGATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354202.9
ENST00000409993.6
CDS-3UTR CCA 90 bp AAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCGGTAGCAGCAGCTTATaGCGCCAGCGCAGATTCAGT +
Preference number: 4 (lower is better)
Translates to: KIQSVVSRGQETPRMPMIGSSSL*RQRRFS
Trigger: ACTGAATCTGCGCTGGCGCCATAAGCTGCTGCTACC...GATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000640747.1
CDS-3UTR CCA 90 bp ATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCACAGAGAAGCTTGGGCACCACAATaGTCGTGTTGCCAAAGTTGG +
Preference number: 4 (lower is better)
Translates to: ISSQQRARNAQDANDHREAWAPQ*SCCQSW
Trigger: CCAACTTTGGCAACACGACCATTGTGGTGCCCAAGC...TTCTCTGTGATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CCA 90 bp CAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCACAGAGGAAATGACTAGTGACTaGCCAGCCTCTAGGCCGTTA +
Preference number: 4 (lower is better)
Translates to: QSVVSRGQETPRMPMITEEMTSD*PASRPL
Trigger: TAACGGCCTAGAGGCTGGCCAGTCACTAGTCATTTC...CTCTGTGATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CCA 90 bp ATAGAAGAGTCGAACGAGCTGATATCGAATGGAGAAGGTGATGGCACTGCCCAGTGTACTGTCACCAGCTaGAGGCTCTCTGCCACCTTT +
Preference number: 4 (lower is better)
Translates to: IEESNELISNGEGDGTAQCTVTS*RLSATF
Trigger: AAAGGTGGCAGAGAGCCTCCAGCTGGTGACAGTACA...CTGGGCAGTGCCATCACCTTCTCCATTCGATATCAGCTCGTTCGACTCTTCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000442480.1
ENST00000640747.1
CDS-3UTR CCA 90 bp AAAGCCATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGGTTGGACCAAGCGCTTaGGTGGTCCCTTCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: KAIGKIQSVVSRGQETPRVGPSA*VVPSAF
Trigger: AAAGGCTGAAGGGACCACCCAAGCGCTTGGTCCAAC...CCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTTACCTATGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR CCA 90 bp CACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTTCCTAGCCCTTCTTTCCGGGAGAACTaGCAGCGGGCTTGGGTGCGA +
Preference number: 4 (lower is better)
Translates to: HLIYNQMTCHRGACVPSPSFREN*QRAWVR
Trigger: TCGCACCCAAGCCCGCTGCCAGTTCTCCCGGAAAGA...AGGGCTAGGAACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR CCA 90 bp GGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAATGTACTGTCACCAGCTaGAGGCTCTCTGCCACCAGT +
Preference number: 4 (lower is better)
Translates to: GPSSIPKTSGSLRVRTLKCTVTS*RLSATS
Trigger: ACTGGTGGCAGAGAGCCTCCAGCTGGTGACAGTACA...TTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414373.5
CDS-3UTR TCA 90 bp TCAAGGGACTCAGACATCATAGAAGAGTCGAACGAGCTGATATCGAATGGAGAAAAAACCCAGCAACTCTaGCTTGAGCCGCCGTCGGGA +
Preference number: 4 (lower is better)
Translates to: SRDSDIIEESNELISNGEKTQQL*LEPPSG
Trigger: TCCCGACGGCGGCTCAAGTCAGAGTTGCTGGGTTTT...TTCTCCATTCGATATCAGCTCGTTCGACTCTTCTATGATGTCTGAGTCCCTTGA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640747.1
CDS-3UTR TCA 90 bp AGCAAGTTGCAGAAAGCCATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAAAAACCCAGCAACTCTaGCTTGAGCCGCCGTCGGGA +
Preference number: 4 (lower is better)
Translates to: SKLQKAIGKIQSVVSRGQKTQQL*LEPPSG
Trigger: TCCCGACGGCGGCTCAAGTCAGAGTTGCTGGGTTTT...TTGCCCTCTGCTGACTACTGATTGGATTTTACCTATGGCTTTCTGCAACTTGCT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp ATAAGAAAAAGACAACACTTTATTGTCTCCATTGAGAGCATGTGGCCCCCTGCTGCTGAGCAGCAGTCCTaGGGCCTCAGCAGTATGGAG +
Preference number: 4 (lower is better)
Translates to: IRKRQHFIVSIESMWPPAAEQQS*GLSSME
Trigger: CTCCATACTGCTGAGGCCTCAGGACTGCTGCTCAGC...AGCAGGGGGCCACATGCTCTCAATGGAGACAATAAAGTGTTGTCTTTTTCTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR TCA 90 bp CACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTTCCTAGCCCTGTTTTGTTGAGGTCCTaGCCACAGAGGCGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: HLIYNQMTCHRGACVPSPVLLRS*PQRRAA
Trigger: TGCTGCGCGCCTCTGTGGTCAGGACCTCAACAAAAC...AGGGCTAGGAACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
CDS-3UTR TCA 90 bp AGCAAGTTGCAGAAAGCCATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAGTTTTGTTGAGGTCCTaGCCACAGAGGCGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: SKLQKAIGKIQSVVSRGQVLLRS*PQRRAA
Trigger: TGCTGCGCGCCTCTGTGGTCAGGACCTCAACAAAAC...TTGCCCTCTGCTGACTACTGATTGGATTTTACCTATGGCTTTCTGCAACTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp TCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAATGTGAGTGTGTCGGCTGGTTTTGTTaGGGTCCTGACCACAGAGGC +
Preference number: 4 (lower is better)
Translates to: SIPKTSGSLRVRTLKCECVGWFC*GPDHRG
Trigger: GCCTCTGTGGTCAGGACCTCAACAAAACCAGCCGAC...ACACTCACATTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp ATCAAGGGACTCAGACATCATAGAAGAGTCGAACGAGCTGATATCGAATGGAGAGTCGGCTGGTTTTGTTaGGGTCCTGACCACAGAGGC +
Preference number: 4 (lower is better)
Translates to: IKGLRHHRRVERADIEWRVGWFC*GPDHRG
Trigger: GCCTCTGTGGTCAGGACCTCAACAAAACCAGCCGAC...TCTCCATTCGATATCAGCTCGTTCGACTCTTCTATGATGTCTGAGTCCCTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640747.1
CDS-3UTR TCA 90 bp CCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAATGGGAAAACAGCACCGCTaGTCACTCCCTGGGATTCTG +
Preference number: 4 (lower is better)
Translates to: PKFYPKNQWFLESQDSEMGKQHR*SLPGIL
Trigger: CAGAATCCCAGGGAGTGATCAGCGGTGCTGTTTTCC...CATTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354202.9
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp CTCTCTGCCACCTTTAAAATAAAGGTGCCCAAGAAAGAGAGGCTCTTGGTCTTGGGAAAACAGCACCGCTaGTCACTCCCTGGGATTCTG +
Preference number: 4 (lower is better)
Translates to: LSATFKIKVPKKERLLVLGKQHR*SLPGIL
Trigger: CAGAATCCCAGGGAGTGATCAGCGGTGCTGTTTTCC...CAAGACCAAGAGCCTCTCTTTCTTGGGCACCTTTATTTTAAAGGTGGCAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640747.1
CDS-3UTR TCA 90 bp GCTGTATCCCACCCTATGAGGCTGCAAAGATGGGATGGAGAGGGAGAGAGTAGCTTCCTGCTAGGATATTaGTGGCATTGGTACAGAACA +
Preference number: 4 (lower is better)
Translates to: AVSHPMRLQRWDGEGESSFLLGY*WHWYRT
Trigger: TGTTCTGTACCAATGCCATCAATATCCTAGCAGGAA...GCTACTCTCTCCCTCTCCATCCCATCTTTGCAGCCTCATAGGGTGGGATACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp AAAGCCATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGTCCCACAAACACCCGTaGTGGGTACCAGTTGTGGTA +
Preference number: 4 (lower is better)
Translates to: KAIGKIQSVVSRGQETPRSHKHP*WVPVVV
Trigger: TACCACAACTGGTACCCATCACGGGTGTTTGTGGGA...CCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTTACCTATGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp TGGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAATCCCACAAACACCCGTaGTGGGTACCAGTTGTGGTA +
Preference number: 4 (lower is better)
Translates to: WPKFYPKNQWFLESQDSESHKHP*WVPVVV
Trigger: TACCACAACTGGTACCCATCACGGGTGTTTGTGGGA...TTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp AGCAGGAGCAATGTGAGGTTTCTCTCATGTATGGGCCCAAGGACTTTAAGTAGCGTAGCATGGTCTTGCTaGAGTGTCCCAAGATGCCCA +
Preference number: 4 (lower is better)
Translates to: SRSNVRFLSCMGPRTLSSVAWSC*SVPRCP
Trigger: TGGGCATCTTGGGACACTTCAGCAAGACCATGCTAC...GCTACTTAAAGTCCTTGGGCCCATACATGAGAGAAACCTCACATTGCTCCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000638850.1
ENST00000640102.1
ENST00000640747.1
CDS-3UTR TCA 90 bp ATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAGTAGCATGGTCTTGCTaGAGTGTCCCAAGATGCCCA +
Preference number: 4 (lower is better)
Translates to: IGKIQSVVSRGQETPRMPVAWSC*SVPRCP
Trigger: TGGGCATCTTGGGACACTTCAGCAAGACCATGCTAC...TGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTTACCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp AAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCGTAGCATGGTCTTGCTaGAGTGTCCCAAGATGCCCA +
Preference number: 4 (lower is better)
Translates to: KIQSVVSRGQETPRMPMIVAWSC*SVPRCP
Trigger: TGGGCATCTTGGGACACTTCAGCAAGACCATGCTAC...GATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp AAAGCCATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGCAGGAGCTGAGGCAGTaGGTAGAGGAAGTTGAACAC +
Preference number: 4 (lower is better)
Translates to: KAIGKIQSVVSRGQETPRQELRQ*VEEVEH
Trigger: GTGTTCAACTTCCTCTACTCACTGCCTCAGCTCCTG...CCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTTACCTATGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp GGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAACAGGAGCTGAGGCAGTaGGTAGAGGAAGTTGAACAC +
Preference number: 4 (lower is better)
Translates to: GPSSIPKTSGSLRVRTLKQELRQ*VEEVEH
Trigger: GTGTTCAACTTCCTCTACTCACTGCCTCAGCTCCTG...TTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp ATTCCCAAGTCCAGATGCAGGCCAAGTATCGGGCGGAAGGGCTTGGGCACCACATGTTGTTACATTCAGTaGATTCACCATCTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: IPKSRCRPSIGRKGLGTTCCYIQ*IHHLQS
Trigger: AGACTGAAGATGGTGAATTCACTGAATGTAACAACA...TGTGGTGCCCAAGCCCTTCCGCCCGATACTTGGCCTGCATCTGGACTTGGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
CDS-3UTR TCA 90 bp AGTGACTGGCCAGCCTCTAGGCCGTTAATTCCTGCTAGGATATTGATGGCATTGGCAGCAGGAGCAATGTaGGGTTTCTCTCATGTATGG +
Preference number: 4 (lower is better)
Translates to: SDWPASRPLIPARILMALAAGAM*GFSHVW
Trigger: CCATACATGAGAGAAACCTCACATTGCTCCTGCTGC...CAATGCCATCAATATCCTAGCAGGAATTAACGGCCTAGAGGCTGGCCAGTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
CDS-3UTR TCA 90 bp AAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCATCGAATGGAGAAGGTaGTGGCACTGCCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: KIQSVVSRGQETPRMPMIIEWRR*WHCPGS
Trigger: AGATCCTGGGCAGTGCCATCACCTTCTCCATTCGAT...GATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp GGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAAATCGAATGGAGAAGGTaGTGGCACTGCCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: GPSSIPKTSGSLRVRTLKIEWRR*WHCPGS
Trigger: AGATCCTGGGCAGTGCCATCACCTTCTCCATTCGAT...TTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp TGGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAATCGAATGGAGAAGGTaGTGGCACTGCCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: WPKFYPKNQWFLESQDSEIEWRR*WHCPGS
Trigger: AGATCCTGGGCAGTGCCATCACCTTCTCCATTCGAT...TTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp GTTCCTAGCCCTGGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAAGAGTCGAACGAGCTaGTATCGAATGGAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: VPSPGPSSIPKTSGSLRVKSRTS*YRMEKV
Trigger: CACCTTCTCCATTCGATATCAGCTCGTTCGACTCTT...GACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCCAGGGCTAGGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp AAAGCCATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGAGAGAGAGGTCAGCCTaGGTCAGGAATCCTAGAGAC +
Preference number: 4 (lower is better)
Translates to: KAIGKIQSVVSRGQETPRRERSA*VRNPRD
Trigger: GTCTCTAGGATTCCTGACTCAGGCTGACCTCTCTCT...CCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTTACCTATGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp GGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAACTGTATCCCACCCTATaGGGCTGCAAAGATGGGATG +
Preference number: 4 (lower is better)
Translates to: GPSSIPKTSGSLRVRTLKLYPTL*GCKDGM
Trigger: CATCCCATCTTTGCAGCCTCATAGGGTGGGATACAG...TTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp ATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCACTTTATTGTCTCCATTaGGAGCATGTGGCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: IGKIQSVVSRGQETPRMPLYCLH*EHVAPC
Trigger: GCAGGGGGCCACATGCTCTCAATGGAGACAATAAAG...TGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTTACCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
CDS-3UTR TCA 90 bp AAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCCTTTATTGTCTCCATTaGGAGCATGTGGCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: KIQSVVSRGQETPRMPMILYCLH*EHVAPC
Trigger: GCAGGGGGCCACATGCTCTCAATGGAGACAATAAAG...GATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
CDS-3UTR TCA 90 bp TCAGAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTTCCTCTTGGGTGCGAGCGCTaGACGAGCAGGCCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: SEHLIYNQMTCHRGACVPLGCER*TSRPAE
Trigger: TTCTGCAGGCCTGCTCGTTCAGCGCTCGCACCCAAG...AGGAACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR TCA 90 bp ATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCACAAGATGGGGCGAGGTaGTCAAAGATCCCGCCTATT +
Preference number: 4 (lower is better)
Translates to: IGKIQSVVSRGQETPRMPQDGAR*SKIPPI
Trigger: AATAGGCGGGATCTTTGATCACCTCGCCCCATCTTG...TGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTTACCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR TCA 90 bp CCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAATGCTTGTACCACGTGTCTaGCACCGCTCACATTCCGGT +
Preference number: 4 (lower is better)
Translates to: PKFYPKNQWFLESQDSEMLVPRV*HRSHSG
Trigger: ACCGGAATGTGAGCGGTGTCAGACACGTGGTACAAG...CATTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR TCA 90 bp GGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAAATCGAATGGAGAAGGTaGTGGCACTGCCCAGGATCA +
Preference number: 4 (lower is better)
Translates to: GPSSIPKTSGSLRVRTLKIEWRR*WHCPGS
Trigger: TGATCCTGGGCAGTGCCATCACCTTCTCCATTCGAT...TTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636404.1
CDS-3UTR GCA 90 bp ATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCACAGAGAATTCATGGTGGGGGAATaGCTTACACTGCTCCTTCAC +
Preference number: 4 (lower is better)
Translates to: ISSQQRARNAQDANDHREFMVGE*LTLLLH
Trigger: GTGAAGGAGCAGTGTAAGGCATTCCCCCACCATGAA...TTCTCTGTGATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354202.9
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR GCA 90 bp TGGCATTGGTACAGAACACTGCCAGCAGCCCCATGTAGACATAGTACAGGATTCCCACGGCAAAGGTCATaGCAGCAAAGTAACAGAAGG +
Preference number: 4 (lower is better)
Translates to: WHWYRTLPAAPCRHSTGFPRQRS*QQSNRR
Trigger: CCTTCTGTTACTTTGCTGGCATGACCTTTGCCGTGG...GAATCCTGTACTATGTCTACATGGGGCTGCTGGCAGTGTTCTGTACCAATGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000640102.1
ENST00000640747.1
CDS-3UTR GCA 90 bp ATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCACAGAGAACCACGGCAAAGGTCATaGCAGCAAAGTAACAGAAGG +
Preference number: 4 (lower is better)
Translates to: ISSQQRARNAQDANDHREPRQRS*QQSNRR
Trigger: CCTTCTGTTACTTTGCTGGCATGACCTTTGCCGTGG...TTCTCTGTGATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR GCA 90 bp CAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCACAGAGGAGCATGTGGCCCCCTaGTTAGTTCTTACTAATCAG +
Preference number: 4 (lower is better)
Translates to: QSVVSRGQETPRMPMITEEHVAP*LVLTNQ
Trigger: CTGATTAGTAAGAACTAAGCAGGGGGCCACATGCTC...CTCTGTGATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
CDS-3UTR GCA 90 bp AGCAAGTTGCAGAAAGCCATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAAGGCAACCTATGTTCTaGCCCGCTGCACCCGCCTAT +
Preference number: 4 (lower is better)
Translates to: SKLQKAIGKIQSVVSRGQRQPMF*PAAPAY
Trigger: ATAGGCGGGTGCAGCGGGGCAGAACATAGGTTGCCT...TTGCCCTCTGCTGACTACTGATTGGATTTTACCTATGGCTTTCTGCAACTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392834.7
CDS-3UTR GCA 90 bp CTTGGGCACCACAATGGTCGTGTTGCCAAAGTTGGTGAAATAGACCATGAGGAGCAGGGCCACAAAATCTaGTGTCGGCTGGTTTTGTTG +
Preference number: 4 (lower is better)
Translates to: LGHHNGRVAKVGEIDHEEQGHKI*CRLVLL
Trigger: CAACAAAACCAGCCGACAGCAGATTTTGTGGCCCTG...CTCCTCATGGTCTATTTCACCAACTTTGGCAACACGACCATTGTGGTGCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392834.7
CDS-3UTR CCA 90 bp TCAGAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTTCCTGAGGCCTCAGCAGTATaGAGTGGCCGCTCCCCACAG +
Preference number: 4 (lower is better)
Translates to: SEHLIYNQMTCHRGACVPEASAV*SGRSPQ
Trigger: CTGTGGGGAGCGGCCACTCCATACTGCTGAGGCCTC...AGGAACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
CDS-3UTR CCA 90 bp GCCTCTAGGCCGTTAATTCCTGCTAGGATATTGATGGCATTGGTACAGAACACTCCGCTGATCACTCCCTaGGATTCTGGGATCTGCTGT +
Preference number: 4 (lower is better)
Translates to: ASRPLIPARILMALVQNTPLITP*DSGICC
Trigger: ACAGCAGATCCCAGAATCCCAGGGAGTGATCAGCGG...AGTGTTCTGTACCAATGCCATCAATATCCTAGCAGGAATTAACGGCCTAGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414373.5
ENST00000640747.1
CDS-3UTR CCA 90 bp GAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTTCCTAGCTCGGGCGGAAGGGCTTaGGCACCACAATGGTCGTGT +
Preference number: 4 (lower is better)
Translates to: EHLIYNQMTCHRGACVPSSGGRA*APQWSC
Trigger: ACACGACCATTGTGGTGCCCAAGCCCTTCCGCCCGA...GCTAGGAACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
CDS-3UTR CCA 90 bp ACAATGATCAAGGGACTCAGACATCATAGAAGAGTCGAACGAGCTGATATCGAATCGGGCGGAAGGGCTTaGGCACCACAATGGTCGTGT +
Preference number: 4 (lower is better)
Translates to: TMIKGLRHHRRVERADIESGGRA*APQWSC
Trigger: ACACGACCATTGTGGTGCCCAAGCCCTTCCGCCCGA...TTCGATATCAGCTCGTTCGACTCTTCTATGATGTCTGAGTCCCTTGATCATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000442480.1
ENST00000640747.1
CDS-3UTR CCA 90 bp ATGAGGGTCATGTTGTTACATTCAGTGAATTCACCATCTTCAGTCTCACTCTGGTCGGGCGGAAGGGCTTaGGCACCACAATGGTCGTGT +
Preference number: 4 (lower is better)
Translates to: MRVMLLHSVNSPSSVSLWSGGRA*APQWSC
Trigger: ACACGACCATTGTGGTGCCCAAGCCCTTCCGCCCGA...CCAGAGTGAGACTGAAGATGGTGAATTCACTGAATGTAACAACATGACCCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000442480.1
ENST00000640102.1
ENST00000640747.1
CDS-3UTR CCA 90 bp ATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCACAGAGAAGAAATGACTAGTGACTaGCCAGCCTCTAGGCCGTTA +
Preference number: 4 (lower is better)
Translates to: ISSQQRARNAQDANDHREEMTSD*PASRPL
Trigger: TAACGGCCTAGAGGCTGGCCAGTCACTAGTCATTTC...TTCTCTGTGATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CCA 90 bp AGCAAGTTGCAGAAAGCCATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAAGTCTGGGTATGCGGTaGCGAGGGCAGGGGATGATA +
Preference number: 4 (lower is better)
Translates to: SKLQKAIGKIQSVVSRGQSLGMR*RGQGMI
Trigger: TATCATCCCCTGCCCTCGCCACCGCATACCCAGACT...TTGCCCTCTGCTGACTACTGATTGGATTTTACCTATGGCTTTCTGCAACTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CCA 90 bp TGGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAATGTACTGTCACCAGCTaGAGGCTCTCTGCCACCTTT +
Preference number: 4 (lower is better)
Translates to: WPKFYPKNQWFLESQDSECTVTS*RLSATF
Trigger: AAAGGTGGCAGAGAGCCTCCAGCTGGTGACAGTACA...TTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CCA 90 bp TCACTCTGGTGTACTGTCACCAGCTGGAGGCTCTCTGCCACCTTTAAAATAAAGTGTACTGTCACCAGCTaGAGGCTCTCTGCCACCTTT +
Preference number: 4 (lower is better)
Translates to: SLWCTVTSWRLSATFKIKCTVTS*RLSATF
Trigger: AAAGGTGGCAGAGAGCCTCCAGCTGGTGACAGTACA...CTTTATTTTAAAGGTGGCAGAGAGCCTCCAGCTGGTGACAGTACACCAGAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000442480.1
ENST00000640102.1
ENST00000640747.1
CDS-3UTR CCA 90 bp TCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAATGTGAGTGTGGCAAGGAGGCAGTCTaGGACCAGAGAGAGAGGTCA +
Preference number: 4 (lower is better)
Translates to: SIPKTSGSLRVRTLKCECGKEAV*DQRERS
Trigger: TGACCTCTCTCTCTGGTCCCAGACTGCCTCCTTGCC...ACACTCACATTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CCA 90 bp CAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCACAGAGAGACTTCCATTTCTGTaGGCAAGGTACTCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: QSVVSRGQETPRMPMITERLPFL*ARYSGS
Trigger: GGAACCAGAGTACCTTGCCCACAGAAATGGAAGTCT...CTCTGTGATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR CCA 90 bp GAAAAAGACAACACTTTATTGTCTCCATTGAGAGCATGTGGCCCCCTGCTTAGTAACTGGGGAACCCTATaGCTTCTCTTCCCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: EKDNTLLSPLRACGPLLSNWGTL*LLFPSR
Trigger: CCGGGAGGGGAAGAGAAGCCATAGGGTTCCCCAGTT...ACTAAGCAGGGGGCCACATGCTCTCAATGGAGACAATAAAGTGTTGTCTTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR CCA 90 bp CCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAATGGACCAAGCGCTTGGGTaGTCCCTTCAGCCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: PKFYPKNQWFLESQDSEMDQALG*SLQPFL
Trigger: AAGGAAAGGCTGAAGGGACCACCCAAGCGCTTGGTC...CATTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR CCA 90 bp GGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAAAGCAGCAGTTCATGGTaGGGGAATGCCTTACACTGC +
Preference number: 4 (lower is better)
Translates to: GPSSIPKTSGSLRVRTLKSSSSW*GNALHC
Trigger: GCAGTGTAAGGCATTCCCCCACCATGAACTGCTGCT...TTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000639704.1
CDS-3UTR CCA 90 bp AAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCGGTAGCAGCAGTTCATaGTGGGGGAATGCCTTACAC +
Preference number: 4 (lower is better)
Translates to: KIQSVVSRGQETPRMPMIGSSSS*WGNALH
Trigger: GTGTAAGGCATTCCCCCACCATGAACTGCTGCTACC...GATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639704.1
CDS-3UTR TCA 90 bp GGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAACTTCCCACACCAATCTaGGCAAAACCCAGCAACTCT +
Preference number: 4 (lower is better)
Translates to: GPSSIPKTSGSLRVRTLKLPTPI*AKPSNS
Trigger: AGAGTTGCTGGGTTTTGCTCAGATTGGTGTGGGAAG...TTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp AAAGCCATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGCTTCCCACACCAATCTaGGCAAAACCCAGCAACTCT +
Preference number: 4 (lower is better)
Translates to: KAIGKIQSVVSRGQETPRLPTPI*AKPSNS
Trigger: AGAGTTGCTGGGTTTTGCTCAGATTGGTGTGGGAAG...CCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTTACCTATGGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp CAAGTTGATGAGGGTCATGTTGTTACATTCAGTGAATTCACCATCTTCAGTCTCGCTGAGCAGCAGTCCTaGGGCCTCAGCAGTATGGAG +
Preference number: 4 (lower is better)
Translates to: QVDEGHVVTFSEFTIFSLAEQQS*GLSSME
Trigger: CTCCATACTGCTGAGGCCTCAGGACTGCTGCTCAGC...GAGACTGAAGATGGTGAATTCACTGAATGTAACAACATGACCCTCATCAACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
CDS-3UTR TCA 90 bp ACAATGATCAAGGGACTCAGACATCATAGAAGAGTCGAACGAGCTGATATCGAAGTTTTGTTGAGGTCCTaGCCACAGAGGCGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: TMIKGLRHHRRVERADIEVLLRS*PQRRAA
Trigger: TGCTGCGCGCCTCTGTGGTCAGGACCTCAACAAAAC...TTCGATATCAGCTCGTTCGACTCTTCTATGATGTCTGAGTCCCTTGATCATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640747.1
CDS-3UTR TCA 90 bp CCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAATGTCCCACAAACACCCGTaGTGGGTACCAGTTGTGGTA +
Preference number: 4 (lower is better)
Translates to: PKFYPKNQWFLESQDSEMSHKHP*WVPVVV
Trigger: TACCACAACTGGTACCCATCACGGGTGTTTGTGGGA...CATTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp CCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAATGCAGGAGCTGAGGCAGTaGGTAGAGGAAGTTGAACAC +
Preference number: 4 (lower is better)
Translates to: PKFYPKNQWFLESQDSEMQELRQ*VEEVEH
Trigger: GTGTTCAACTTCCTCTACTCACTGCCTCAGCTCCTG...CATTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp CTAATCAGAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTGGCGAGGGCAGGGGATaGTATGCAGGAGCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: LIRTLNLQSNDMSPWSLCGEGRG*YAGAEA
Trigger: TGCCTCAGCTCCTGCATATCATCCCCTGCCCTCGCC...ACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTCTGATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
CDS-3UTR TCA 90 bp AGATGCCCACCACGGCAAAGGTCATGCCAGCAAAGTAACAGAAGGTATCTCCCAAGAGGCTCTTGGTCTTaGACTTGGAATAGCTCATCT +
Preference number: 4 (lower is better)
Translates to: RCPPRQRSCQQSNRRYLPRGSWS*TWNSSS
Trigger: AGATGAGCTATTCCAAGTTCAAGACCAAGAGCCTCT...TGGGAGATACCTTCTGTTACTTTGCTGGCATGACCTTTGCCGTGGTGGGCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000640102.1
ENST00000640747.1
CDS-3UTR TCA 90 bp TGGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAGCAGCAGGAGCAATGTaGGGTTTCTCTCATGTATGG +
Preference number: 4 (lower is better)
Translates to: WPKFYPKNQWFLESQDSEAAGAM*GFSHVW
Trigger: CCATACATGAGAGAAACCTCACATTGCTCCTGCTGC...TTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp GGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAAGCAGCAGGAGCAATGTaGGGTTTCTCTCATGTATGG +
Preference number: 4 (lower is better)
Translates to: GPSSIPKTSGSLRVRTLKAAGAM*GFSHVW
Trigger: CCATACATGAGAGAAACCTCACATTGCTCCTGCTGC...TTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp AAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCGCAGCAGGAGCAATGTaGGGTTTCTCTCATGTATGG +
Preference number: 4 (lower is better)
Translates to: KIQSVVSRGQETPRMPMIAAGAM*GFSHVW
Trigger: CCATACATGAGAGAAACCTCACATTGCTCCTGCTGC...GATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp TGGCCAGCCTCTAGGCCGTTAATTCCTGCTAGGATATTGATGGCATTGGTACAGAAGAGTCGAACGAGCTaGTATCGAATGGAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: WPASRPLIPARILMALVQKSRTS*YRMEKV
Trigger: CACCTTCTCCATTCGATATCAGCTCGTTCGACTCTT...CTGTACCAATGCCATCAATATCCTAGCAGGAATTAACGGCCTAGAGGCTGGCCA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640747.1
CDS-3UTR TCA 90 bp AGGGACTCAGACATCATAGAAGAGTCGAACGAGCTGATATCGAATGGAGAAGGTAGAGAGAGGTCAGCCTaGGTCAGGAATCCTAGAGAC +
Preference number: 4 (lower is better)
Translates to: RDSDIIEESNELISNGEGRERSA*VRNPRD
Trigger: GTCTCTAGGATTCCTGACTCAGGCTGACCTCTCTCT...ACCTTCTCCATTCGATATCAGCTCGTTCGACTCTTCTATGATGTCTGAGTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000640747.1
CDS-3UTR TCA 90 bp ATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAAAATCTGGAGGAGTATaGAGAGTGAGAGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: IGKIQSVVSRGQETPRMPKSGGV*RVREAW
Trigger: CCAGGCCTCTCTCACTCTTCATACTCCTCCAGATTT...TGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTTACCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp GTCAGGAATCCTAGAGACTGTGAGGTAAAGGACAATGATCAAGGGACTCAGACACTGTATCCCACCCTATaGGGCTGCAAAGATGGGATG +
Preference number: 4 (lower is better)
Translates to: VRNPRDCEVKDNDQGTQTLYPTL*GCKDGM
Trigger: CATCCCATCTTTGCAGCCTCATAGGGTGGGATACAG...TGTCTGAGTCCCTTGATCATTGTCCTTTACCTCACAGTCTCTAGGATTCCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000640747.1
CDS-3UTR TCA 90 bp AGGAAGTTGAACACCTGGGGCATGAAGAATAGTAGCATGGTCTTGCTGAAGTGTCTGTATCCCACCCTATaGGGCTGCAAAGATGGGATG +
Preference number: 4 (lower is better)
Translates to: RKLNTWGMKNSSMVLLKCLYPTL*GCKDGM
Trigger: CATCCCATCTTTGCAGCCTCATAGGGTGGGATACAG...ACACTTCAGCAAGACCATGCTACTATTCTTCATGCCCCAGGTGTTCAACTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392834.7
ENST00000640747.1
CDS-3UTR TCA 90 bp GAGTCGAACGAGCTGATATCGAATGGAGAAGGTGATGGCACTGCCCAGGATCTGCAGGACTCTGAAATGTaGGTGTGGATAACTGCAAAA +
Preference number: 4 (lower is better)
Translates to: ESNELISNGEGDGTAQDLQDSEM*VWITAK
Trigger: TTTTGCAGTTATCCACACTCACATTTCAGAGTCCTG...CAGATCCTGGGCAGTGCCATCACCTTCTCCATTCGATATCAGCTCGTTCGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000638850.1
ENST00000640747.1
CDS-3UTR TCA 90 bp TCAGACATCATAGAAGAGTCGAACGAGCTGATATCGAATGGAGAAGGTGATGGCCTTTATTGTCTCCATTaGGAGCATGTGGCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: SDIIEESNELISNGEGDGLYCLH*EHVAPC
Trigger: GCAGGGGGCCACATGCTCTCAATGGAGACAATAAAG...GCCATCACCTTCTCCATTCGATATCAGCTCGTTCGACTCTTCTATGATGTCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392834.7
CDS-3UTR TCA 90 bp GAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTTCCTAGCCAGGAAACCTTGAGCTaGGTGTGGGAGCACCGCGAT +
Preference number: 4 (lower is better)
Translates to: EHLIYNQMTCHRGACVPSQETLS*VWEHRD
Trigger: ATCGCGGTGCTCCCACACTCAGCTCAAGGTTTCCTG...GCTAGGAACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR TCA 90 bp GAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTTCCTAGCCAGGAAGATGGCTATTaGAAGGCAGGGGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: EHLIYNQMTCHRGACVPSQEDGY*KAGGGE
Trigger: CTCCCCACCCCCTGCCTTTCAATAGCCATCTTCCTG...GCTAGGAACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR GCA 90 bp GGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAATGGGATTCTGGGATCTaGTGTCGGCTGGTTTTGTTG +
Preference number: 4 (lower is better)
Translates to: GPSSIPKTSGSLRVRTLKWDSGI*CRLVLL
Trigger: CAACAAAACCAGCCGACAGCAGATCCCAGAATCCCA...TTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354202.9
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR GCA 90 bp ATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCACAGAGAAGGGAATGCCTTACACTaGTCCTTCACAAAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: ISSQQRARNAQDANDHREGNALH*SFTKQF
Trigger: GAACTGCTTTGTGAAGGAGCAGTGTAAGGCATTCCC...TTCTCTGTGATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354202.9
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR GCA 90 bp AAAGCCATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATTGGTACAGAACACTaGCAGCAGCCCCATGTAGAC +
Preference number: 4 (lower is better)
Translates to: KAIGKIQSVVSRGQETPRIGTEH*QQPHVD
Trigger: GTCTACATGGGGCTGCTGGCAGTGTTCTGTACCAAT...CCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTTACCTATGGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR GCA 90 bp AAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCCCACGGCAAAGGTCATaGCAGCAAAGTAACAGAAGG +
Preference number: 4 (lower is better)
Translates to: KIQSVVSRGQETPRMPMIPRQRS*QQSNRR
Trigger: CCTTCTGTTACTTTGCTGGCATGACCTTTGCCGTGG...GATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR GCA 90 bp GAGAGTAGCAAGTTGCAGAAAGCCATAGGTAAAATCCAATCAGTAGTCAGCAGATGGGAGCACCGCGATTaGAAGATGGGGCGAGGTGAT +
Preference number: 4 (lower is better)
Translates to: ESSKLQKAIGKIQSVVSRWEHRD*KMGRGD
Trigger: ATCACCTCGCCCCATCTTGCAATCGCGGTGCTCCCA...TCTGCTGACTACTGATTGGATTTTACCTATGGCTTTCTGCAACTTGCTACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR GCA 90 bp CCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAATGTCCCTTAATCTGGGATaGCTCCGGCTCCAGGAAGAT +
Preference number: 4 (lower is better)
Translates to: PKFYPKNQWFLESQDSEMSLNLG*LRLQED
Trigger: ATCTTCCTGGAGCCGGAGGCATCCCAGATTAAGGGA...CATTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR CCA 90 bp AGTAGCAAGTTGATGAGGGTCATGTTGTTACATTCAGTGAATTCACCATCTTCACTCAGCAGTATGGAGTaGCCGCTCCCCACAGGCAGG +
Preference number: 4 (lower is better)
Translates to: SSKLMRVMLLHSVNSPSSLSSME*PLPTGR
Trigger: CCTGCCTGTGGGGAGCGGCCACTCCATACTGCTGAG...TGAAGATGGTGAATTCACTGAATGTAACAACATGACCCTCATCAACTTGCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
CDS-3UTR CCA 90 bp TGGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAGCCACAAATTCATGGTaGGGGAATGCCTTACACTGC +
Preference number: 4 (lower is better)
Translates to: WPKFYPKNQWFLESQDSEATNSW*GNALHC
Trigger: GCAGTGTAAGGCATTCCCCCACCATGAATTTGTGGC...TTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354202.9
ENST00000409993.6
CDS-3UTR CCA 90 bp TGGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAAGGGCCACAAATTCATaGTGGGGGAATGCCTTACAC +
Preference number: 4 (lower is better)
Translates to: WPKFYPKNQWFLESQDSERATNS*WGNALH
Trigger: GTGTAAGGCATTCCCCCACCATGAATTTGTGGCCCT...TTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354202.9
ENST00000409993.6
CDS-3UTR CCA 90 bp AGGAGCAATGTGAGGTTTCTCTCATGTATGGGCCCAAGGACTTTAAGTAGCAAGGCTTGGGCACCACAATaGTCGTGTTGCCAAAGTTGG +
Preference number: 4 (lower is better)
Translates to: RSNVRFLSCMGPRTLSSKAWAPQ*SCCQSW
Trigger: CCAACTTTGGCAACACGACCATTGTGGTGCCCAAGC...CTTGCTACTTAAAGTCCTTGGGCCCATACATGAGAGAAACCTCACATTGCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000442480.1
ENST00000640102.1
ENST00000640747.1
CDS-3UTR CCA 90 bp ATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAGAAATGACTAGTGACTaGCCAGCCTCTAGGCCGTTA +
Preference number: 4 (lower is better)
Translates to: IGKIQSVVSRGQETPRMPEMTSD*PASRPL
Trigger: TAACGGCCTAGAGGCTGGCCAGTCACTAGTCATTTC...TGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTTACCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CCA 90 bp GGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAAGAAATGACTAGTGACTaGCCAGCCTCTAGGCCGTTA +
Preference number: 4 (lower is better)
Translates to: GPSSIPKTSGSLRVRTLKEMTSD*PASRPL
Trigger: TAACGGCCTAGAGGCTGGCCAGTCACTAGTCATTTC...TTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CCA 90 bp ACAATGATCAAGGGACTCAGACATCATAGAAGAGTCGAACGAGCTGATATCGAAAGTCTGGGTATGCGGTaGCGAGGGCAGGGGATGATA +
Preference number: 4 (lower is better)
Translates to: TMIKGLRHHRRVERADIESLGMR*RGQGMI
Trigger: TATCATCCCCTGCCCTCGCCACCGCATACCCAGACT...TTCGATATCAGCTCGTTCGACTCTTCTATGATGTCTGAGTCCCTTGATCATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000442480.1
ENST00000638850.1
ENST00000640747.1
CDS-3UTR CCA 90 bp GAGAGTAGCAAGTTGCAGAAAGCCATAGGTAAAATCCAATCAGTAGTCAGCAGAGGCAAGGAGGCAGTCTaGGACCAGAGAGAGAGGTCA +
Preference number: 4 (lower is better)
Translates to: ESSKLQKAIGKIQSVVSRGKEAV*DQRERS
Trigger: TGACCTCTCTCTCTGGTCCCAGACTGCCTCCTTGCC...TCTGCTGACTACTGATTGGATTTTACCTATGGCTTTCTGCAACTTGCTACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CCA 90 bp AAAGGGTATCATGAAGTAGAGGGAAAAGACATGATCATCCCGACAATCACCTTCGGCAAGGAGGCAGTCTaGGACCAGAGAGAGAGGTCA +
Preference number: 4 (lower is better)
Translates to: KGYHEVEGKDMIIPTITFGKEAV*DQRERS
Trigger: TGACCTCTCTCTCTGGTCCCAGACTGCCTCCTTGCC...GAAGGTGATTGTCGGGATGATCATGTCTTTTCCCTCTACTTCATGATACCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640747.1
CDS-3UTR CCA 90 bp GATGAGGGTCATGTTGTTACATTCAGTGAATTCACCATCTTCAGTCTCACTCTGGGCAAGGAGGCAGTCTaGGACCAGAGAGAGAGGTCA +
Preference number: 4 (lower is better)
Translates to: DEGHVVTFSEFTIFSLTLGKEAV*DQRERS
Trigger: TGACCTCTCTCTCTGGTCCCAGACTGCCTCCTTGCC...CAGAGTGAGACTGAAGATGGTGAATTCACTGAATGTAACAACATGACCCTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000638850.1
ENST00000640747.1
CDS-3UTR CCA 90 bp CACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTTCCTAGCCCTAGAAACGGGGTGAGTTaGACCAAGCGCTTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: HLIYNQMTCHRGACVPSPRNGVS*TKRLGG
Trigger: ACCACCCAAGCGCTTGGTCCAACTCACCCCGTTTCT...AGGGCTAGGAACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR CCA 90 bp CTAATCAGAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTGAGTCCGGGGCCTCCTaGCGTCACTCTTCGCCTTCA +
Preference number: 4 (lower is better)
Translates to: LIRTLNLQSNDMSPWSLCESGAS*RHSSPS
Trigger: TGAAGGCGAAGAGTGACGCCAGGAGGCCCCGGACTC...ACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTCTGATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR TCA 90 bp AGTAGAGGGAAAAGACATGATCATCCCGACAATCACCTTCCAACTCTACCAGGTCTTCCCACACCAATCTaGGCAAAACCCAGCAACTCT +
Preference number: 4 (lower is better)
Translates to: SRGKRHDHPDNHLPTLPGLPTPI*AKPSNS
Trigger: AGAGTTGCTGGGTTTTGCTCAGATTGGTGTGGGAAG...ACCTGGTAGAGTTGGAAGGTGATTGTCGGGATGATCATGTCTTTTCCCTCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
CDS-3UTR TCA 90 bp GTCAGGAATCCTAGAGACTGTGAGGTAAAGGACAATGATCAAGGGACTCAGACACTTCCCACACCAATCTaGGCAAAACCCAGCAACTCT +
Preference number: 4 (lower is better)
Translates to: VRNPRDCEVKDNDQGTQTLPTPI*AKPSNS
Trigger: AGAGTTGCTGGGTTTTGCTCAGATTGGTGTGGGAAG...TGTCTGAGTCCCTTGATCATTGTCCTTTACCTCACAGTCTCTAGGATTCCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640747.1
CDS-3UTR TCA 90 bp ACAATGATCAAGGGACTCAGACATCATAGAAGAGTCGAACGAGCTGATATCGAAGCGAGACGATCAAATTaGTCAGCAGCGGCATGGGCA +
Preference number: 4 (lower is better)
Translates to: TMIKGLRHHRRVERADIEARRSN*SAAAWA
Trigger: TGCCCATGCCGCTGCTGATCAATTTGATCGTCTCGC...TTCGATATCAGCTCGTTCGACTCTTCTATGATGTCTGAGTCCCTTGATCATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640747.1
CDS-3UTR TCA 90 bp GAGAGTAGCAAGTTGCAGAAAGCCATAGGTAAAATCCAATCAGTAGTCAGCAGAGCGAGACGATCAAATTaGTCAGCAGCGGCATGGGCA +
Preference number: 4 (lower is better)
Translates to: ESSKLQKAIGKIQSVVSRARRSN*SAAAWA
Trigger: TGCCCATGCCGCTGCTGATCAATTTGATCGTCTCGC...TCTGCTGACTACTGATTGGATTTTACCTATGGCTTTCTGCAACTTGCTACTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp TATCATGAAGTAGAGGGAAAAGACATGATCATCCCGACAATCACCTTCCAACTCGGAAAACAGCACCGCTaGTCACTCCCTGGGATTCTG +
Preference number: 4 (lower is better)
Translates to: YHEVEGKDMIIPTITFQLGKQHR*SLPGIL
Trigger: CAGAATCCCAGGGAGTGATCAGCGGTGCTGTTTTCC...GAGTTGGAAGGTGATTGTCGGGATGATCATGTCTTTTCCCTCTACTTCATGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414373.5
ENST00000640747.1
CDS-3UTR TCA 90 bp GAGAGTAGCAAGTTGCAGAAAGCCATAGGTAAAATCCAATCAGTAGTCAGCAGAGGAAAACAGCACCGCTaGTCACTCCCTGGGATTCTG +
Preference number: 4 (lower is better)
Translates to: ESSKLQKAIGKIQSVVSRGKQHR*SLPGIL
Trigger: CAGAATCCCAGGGAGTGATCAGCGGTGCTGTTTTCC...TCTGCTGACTACTGATTGGATTTTACCTATGGCTTTCTGCAACTTGCTACTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354202.9
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp CAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCACAGAGTTCCTGCTAGGATATTaGTGGCATTGGTACAGAACA +
Preference number: 4 (lower is better)
Translates to: QSVVSRGQETPRMPMITEFLLGY*WHWYRT
Trigger: TGTTCTGTACCAATGCCATCAATATCCTAGCAGGAA...CTCTGTGATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp CGGCAAAGGTCATGCCAGCAAAGTAACAGAAGGTATCTCCCACAAACACCCGTGTTCCTGCTAGGATATTaGTGGCATTGGTACAGAACA +
Preference number: 4 (lower is better)
Translates to: RQRSCQQSNRRYLPQTPVFLLGY*WHWYRT
Trigger: TGTTCTGTACCAATGCCATCAATATCCTAGCAGGAA...CACGGGTGTTTGTGGGAGATACCTTCTGTTACTTTGCTGGCATGACCTTTGCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000640102.1
ENST00000640747.1
CDS-3UTR TCA 90 bp AAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCAAGAGTCGAACGAGCTaGTATCGAATGGAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: KIQSVVSRGQETPRMPMIKSRTS*YRMEKV
Trigger: CACCTTCTCCATTCGATATCAGCTCGTTCGACTCTT...GATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp AGCAAGTTGCAGAAAGCCATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAAGAGAGAGGTCAGCCTaGGTCAGGAATCCTAGAGAC +
Preference number: 4 (lower is better)
Translates to: SKLQKAIGKIQSVVSRGQRERSA*VRNPRD
Trigger: GTCTCTAGGATTCCTGACTCAGGCTGACCTCTCTCT...TTGCCCTCTGCTGACTACTGATTGGATTTTACCTATGGCTTTCTGCAACTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp CACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTTCCTAGCCCTAGAGAGAGGTCAGCCTaGGTCAGGAATCCTAGAGAC +
Preference number: 4 (lower is better)
Translates to: HLIYNQMTCHRGACVPSPRERSA*VRNPRD
Trigger: GTCTCTAGGATTCCTGACTCAGGCTGACCTCTCTCT...AGGGCTAGGAACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
CDS-3UTR TCA 90 bp TCAAGGGACTCAGACATCATAGAAGAGTCGAACGAGCTGATATCGAATGGAGAAAGAGAGAGGTCAGCCTaGGTCAGGAATCCTAGAGAC +
Preference number: 4 (lower is better)
Translates to: SRDSDIIEESNELISNGERERSA*VRNPRD
Trigger: GTCTCTAGGATTCCTGACTCAGGCTGACCTCTCTCT...TTCTCCATTCGATATCAGCTCGTTCGACTCTTCTATGATGTCTGAGTCCCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000640747.1
CDS-3UTR TCA 90 bp AGTAGAGGGAAAAGACATGATCATCCCGACAATCACCTTCCAACTCTACCAGGTAAATCTGGAGGAGTATaGAGAGTGAGAGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SRGKRHDHPDNHLPTLPGKSGGV*RVREAW
Trigger: CCAGGCCTCTCTCACTCTTCATACTCCTCCAGATTT...ACCTGGTAGAGTTGGAAGGTGATTGTCGGGATGATCATGTCTTTTCCCTCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640747.1
CDS-3UTR TCA 90 bp AGGAATCCTAGAGACTGTGAGGTAAAGGACAATGATCAAGGGACTCAGACATCACTGTATCCCACCCTATaGGGCTGCAAAGATGGGATG +
Preference number: 4 (lower is better)
Translates to: RNPRDCEVKDNDQGTQTSLYPTL*GCKDGM
Trigger: CATCCCATCTTTGCAGCCTCATAGGGTGGGATACAG...TGATGTCTGAGTCCCTTGATCATTGTCCTTTACCTCACAGTCTCTAGGATTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000640747.1
CDS-3UTR TCA 90 bp GAGAGTAGCAAGTTGCAGAAAGCCATAGGTAAAATCCAATCAGTAGTCAGCAGATCTTGCAGGAAACCTTaGGCTGAGTGTGGGAGCACC +
Preference number: 4 (lower is better)
Translates to: ESSKLQKAIGKIQSVVSRSCRKP*AECGST
Trigger: GGTGCTCCCACACTCAGCTCAAGGTTTCCTGCAAGA...TCTGCTGACTACTGATTGGATTTTACCTATGGCTTTCTGCAACTTGCTACTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR GCA 90 bp GGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAAGGGAATGCCTTACACTaGTCCTTCACAAAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: GPSSIPKTSGSLRVRTLKGNALH*SFTKQF
Trigger: GAACTGCTTTGTGAAGGAGCAGTGTAAGGCATTCCC...TTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354202.9
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR GCA 90 bp AGGAAGTTGAACACCTGGGGCATGAAGAATAGTAGCATGGTCTTGCTGAAGTGTTTCATGGTGGGGGAATaGCTTACACTGCTCCTTCAC +
Preference number: 4 (lower is better)
Translates to: RKLNTWGMKNSSMVLLKCFMVGE*LTLLLH
Trigger: GTGAAGGAGCAGTGTAAGGCATTCCCCCACCATGAA...ACACTTCAGCAAGACCATGCTACTATTCTTCATGCCCCAGGTGTTCAACTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640747.1
CDS-3UTR GCA 90 bp GAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTTCCTAGCATTCCCAAGTCCAGATaGAGGCCAAGTATCGGGCGG +
Preference number: 4 (lower is better)
Translates to: EHLIYNQMTCHRGACVPSIPKSR*RPSIGR
Trigger: CCGCCCGATACTTGGCCTGCATCTGGACTTGGGAAT...GCTAGGAACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
CDS-3UTR GCA 90 bp ATAAGAAAAAGACAACACTTTATTGTCTCCATTGAGAGCATGTGGCCCCCTGCTATTCCCAAGTCCAGATaGAGGCCAAGTATCGGGCGG +
Preference number: 4 (lower is better)
Translates to: IRKRQHFIVSIESMWPPAIPKSR*RPSIGR
Trigger: CCGCCCGATACTTGGCCTGCATCTGGACTTGGGAAT...AGCAGGGGGCCACATGCTCTCAATGGAGACAATAAAGTGTTGTCTTTTTCTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR GCA 90 bp GCCTCTAGGCCGTTAATTCCTGCTAGGATATTGATGGCATTGGTACAGAACACTATTGGTACAGAACACTaGCAGCAGCCCCATGTAGAC +
Preference number: 4 (lower is better)
Translates to: ASRPLIPARILMALVQNTIGTEH*QQPHVD
Trigger: GTCTACATGGGGCTGCTGGCAGTGTTCTGTACCAAT...AGTGTTCTGTACCAATGCCATCAATATCCTAGCAGGAATTAACGGCCTAGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
CDS-3UTR GCA 90 bp AGGAGCAATGTGAGGTTTCTCTCATGTATGGGCCCAAGGACTTTAAGTAGCAAGATTGGTACAGAACACTaGCAGCAGCCCCATGTAGAC +
Preference number: 4 (lower is better)
Translates to: RSNVRFLSCMGPRTLSSKIGTEH*QQPHVD
Trigger: GTCTACATGGGGCTGCTGGCAGTGTTCTGTACCAAT...CTTGCTACTTAAAGTCCTTGGGCCCATACATGAGAGAAACCTCACATTGCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000442480.1
ENST00000638850.1
ENST00000640102.1
ENST00000640747.1
CDS-3UTR GCA 90 bp AGGGACTCAGACATCATAGAAGAGTCGAACGAGCTGATATCGAATGGAGAAGGTCCACGGCAAAGGTCATaGCAGCAAAGTAACAGAAGG +
Preference number: 4 (lower is better)
Translates to: RDSDIIEESNELISNGEGPRQRS*QQSNRR
Trigger: CCTTCTGTTACTTTGCTGGCATGACCTTTGCCGTGG...ACCTTCTCCATTCGATATCAGCTCGTTCGACTCTTCTATGATGTCTGAGTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000638850.1
ENST00000640747.1
CDS-3UTR GCA 90 bp AAAGCCATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGGAGCATGTGGCCCCCTaGTTAGTTCTTACTAATCAG +
Preference number: 4 (lower is better)
Translates to: KAIGKIQSVVSRGQETPREHVAP*LVLTNQ
Trigger: CTGATTAGTAAGAACTAAGCAGGGGGCCACATGCTC...CCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTTACCTATGGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
CDS-3UTR GCA 90 bp TTACTAATCAGAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGCGGTGTTCGCCTGGCTaGTGCAATATGCCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: LLIRTLNLQSNDMSPWSLRCSPG*CNMPGA
Trigger: AGCCCCGGGCATATTGCAGCAGCCAGGCGAACACCG...CAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTCTGATTAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR GCA 90 bp ATCAAGGGACTCAGACATCATAGAAGAGTCGAACGAGCTGATATCGAATGGAGAGACGCGCCTGTTTCTTaGAGGAAACCTGTTGCCAAC +
Preference number: 4 (lower is better)
Translates to: IKGLRHHRRVERADIEWRDAPVS*RKPVAN
Trigger: GTTGGCAACAGGTTTCCTGCAAGAAACAGGCGCGTC...TCTCCATTCGATATCAGCTCGTTCGACTCTTCTATGATGTCTGAGTCCCTTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442480.1
CDS-3UTR CCA 90 bp ACTTTAAGTAGCAAGTTGATGAGGGTCATGTTGTTACATTCAGTGAATTCACCAGAGGCCTCAGCAGTATaGAGTGGCCGCTCCCCACAG +
Preference number: 4 (lower is better)
Translates to: TLSSKLMRVMLLHSVNSPEASAV*SGRSPQ
Trigger: CTGTGGGGAGCGGCCACTCCATACTGCTGAGGCCTC...TGGTGAATTCACTGAATGTAACAACATGACCCTCATCAACTTGCTACTTAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
CDS-3UTR CCA 90 bp TCAGAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTTCCTCACTCCCTGGGATTCTaGGATCTGCTGTCGGCTGGT +
Preference number: 4 (lower is better)
Translates to: SEHLIYNQMTCHRGACVPHSLGF*DLLSAG
Trigger: ACCAGCCGACAGCAGATCCCAGAATCCCAGGGAGTG...AGGAACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354202.9
ENST00000409993.6
ENST00000414373.5
CDS-3UTR CCA 90 bp TCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAATGTGAGTGTGCTTGGGCACCACAATaGTCGTGTTGCCAAAGTTGG +
Preference number: 4 (lower is better)
Translates to: SIPKTSGSLRVRTLKCECAWAPQ*SCCQSW
Trigger: CCAACTTTGGCAACACGACCATTGTGGTGCCCAAGC...ACACTCACATTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CCA 90 bp AGCTGGAGGCTCTCTGCCACCTTTAAAATAAAGGTGCCCAAGAAAGAGAGGCTCAGGAAGTTGAACACCTaGGGCATGAAGAATAGTAGC +
Preference number: 4 (lower is better)
Translates to: SWRLSATFKIKVPKKERLRKLNT*GMKNSS
Trigger: GCTACTATTCTTCATGCCCCAGGTGTTCAACTTCCT...GAGCCTCTCTTTCTTGGGCACCTTTATTTTAAAGGTGGCAGAGAGCCTCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000640102.1
ENST00000640747.1
CDS-3UTR CCA 90 bp AGCAAGTTGCAGAAAGCCATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAATGTACTGTCACCAGCTaGAGGCTCTCTGCCACCTTT +
Preference number: 4 (lower is better)
Translates to: SKLQKAIGKIQSVVSRGQCTVTS*RLSATF
Trigger: AAAGGTGGCAGAGAGCCTCCAGCTGGTGACAGTACA...TTGCCCTCTGCTGACTACTGATTGGATTTTACCTATGGCTTTCTGCAACTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CCA 90 bp CAAGTTGATGAGGGTCATGTTGTTACATTCAGTGAATTCACCATCTTCAGTCTCGGCAAGGAGGCAGTCTaGGACCAGAGAGAGAGGTCA +
Preference number: 4 (lower is better)
Translates to: QVDEGHVVTFSEFTIFSLGKEAV*DQRERS
Trigger: TGACCTCTCTCTCTGGTCCCAGACTGCCTCCTTGCC...GAGACTGAAGATGGTGAATTCACTGAATGTAACAACATGACCCTCATCAACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000638850.1
ENST00000640747.1
CDS-3UTR CCA 90 bp CACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTTCCTAGCCCTAGGGTGGGCATAAACTaGGGAACCCTATGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: HLIYNQMTCHRGACVPSPRVGIN*GTLWLL
Trigger: GAGAAGCCATAGGGTTCCCCAGTTTATGCCCACCCT...AGGGCTAGGAACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR CCA 90 bp TTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTTCCTAGCCCTGGCACTCAAGCTTCATGGTaGGGGAATGCCTTACACTGC +
Preference number: 4 (lower is better)
Translates to: LIYNQMTCHRGACVPSPGTQASW*GNALHC
Trigger: GCAGTGTAAGGCATTCCCCCACCATGAAGCTTGAGT...GCCAGGGCTAGGAACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414373.5
CDS-3UTR CCA 90 bp ACAATGATGGAAGCAGAAATGACTAGTGACTGGCCAGCCTCTAGGCCGTTAATTAGATCATGCAGCAGATaGCAAGGAGGGCACTTCATG +
Preference number: 4 (lower is better)
Translates to: TMMEAEMTSDWPASRPLIRSCSR*QGGHFM
Trigger: CATGAAGTGCCCTCCTTGCCATCTGCTGCATGATCT...AATTAACGGCCTAGAGGCTGGCCAGTCACTAGTCATTTCTGCTTCCATCATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640747.1
CDS-3UTR TCA 90 bp ATCAAGGGACTCAGACATCATAGAAGAGTCGAACGAGCTGATATCGAATGGAGACTTCCCACACCAATCTaGGCAAAACCCAGCAACTCT +
Preference number: 4 (lower is better)
Translates to: IKGLRHHRRVERADIEWRLPTPI*AKPSNS
Trigger: AGAGTTGCTGGGTTTTGCTCAGATTGGTGTGGGAAG...TCTCCATTCGATATCAGCTCGTTCGACTCTTCTATGATGTCTGAGTCCCTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640747.1
CDS-3UTR TCA 90 bp ATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCACAGAGAATTCCTGCTAGGATATTaGTGGCATTGGTACAGAACA +
Preference number: 4 (lower is better)
Translates to: ISSQQRARNAQDANDHREFLLGY*WHWYRT
Trigger: TGTTCTGTACCAATGCCATCAATATCCTAGCAGGAA...TTCTCTGTGATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp GGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAAAGAGGCTCTTGGTCTTaGACTTGGAATAGCTCATCT +
Preference number: 4 (lower is better)
Translates to: GPSSIPKTSGSLRVRTLKRGSWS*TWNSSS
Trigger: AGATGAGCTATTCCAAGTTCAAGACCAAGAGCCTCT...TTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp GAGAGTAGCAAGTTGCAGAAAGCCATAGGTAAAATCCAATCAGTAGTCAGCAGAATCGAATGGAGAAGGTaGTGGCACTGCCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: ESSKLQKAIGKIQSVVSRIEWRR*WHCPGS
Trigger: AGATCCTGGGCAGTGCCATCACCTTCTCCATTCGAT...TCTGCTGACTACTGATTGGATTTTACCTATGGCTTTCTGCAACTTGCTACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp ACAATGATCAAGGGACTCAGACATCATAGAAGAGTCGAACGAGCTGATATCGAAATCGAATGGAGAAGGTaGTGGCACTGCCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: TMIKGLRHHRRVERADIEIEWRR*WHCPGS
Trigger: AGATCCTGGGCAGTGCCATCACCTTCTCCATTCGAT...TTCGATATCAGCTCGTTCGACTCTTCTATGATGTCTGAGTCCCTTGATCATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000442480.1
ENST00000638850.1
ENST00000640747.1
CDS-3UTR TCA 90 bp TCAGACATCATAGAAGAGTCGAACGAGCTGATATCGAATGGAGAAGGTGATGGCAAGAGTCGAACGAGCTaGTATCGAATGGAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: SDIIEESNELISNGEGDGKSRTS*YRMEKV
Trigger: CACCTTCTCCATTCGATATCAGCTCGTTCGACTCTT...GCCATCACCTTCTCCATTCGATATCAGCTCGTTCGACTCTTCTATGATGTCTGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000442480.1
ENST00000636404.1
ENST00000638850.1
ENST00000640747.1
CDS-3UTR TCA 90 bp GTCAGGAATCCTAGAGACTGTGAGGTAAAGGACAATGATCAAGGGACTCAGACAAAGAGTCGAACGAGCTaGTATCGAATGGAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: VRNPRDCEVKDNDQGTQTKSRTS*YRMEKV
Trigger: CACCTTCTCCATTCGATATCAGCTCGTTCGACTCTT...TGTCTGAGTCCCTTGATCATTGTCCTTTACCTCACAGTCTCTAGGATTCCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000640747.1
CDS-3UTR TCA 90 bp AACAGAAGGTATCTCCCACAAACACCCGTGATGGGTACCAGTTGTGGTAGAGCACAGGACTCTGAAATGTaGGTGTGGATAACTGCAAAA +
Preference number: 4 (lower is better)
Translates to: NRRYLPQTPVMGTSCGRAQDSEM*VWITAK
Trigger: TTTTGCAGTTATCCACACTCACATTTCAGAGTCCTG...TGCTCTACCACAACTGGTACCCATCACGGGTGTTTGTGGGAGATACCTTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392834.7
ENST00000640747.1
CDS-3UTR TCA 90 bp AGCTGGAGGCTCTCTGCCACCTTTAAAATAAAGGTGCCCAAGAAAGAGAGGCTCCAGGACTCTGAAATGTaGGTGTGGATAACTGCAAAA +
Preference number: 4 (lower is better)
Translates to: SWRLSATFKIKVPKKERLQDSEM*VWITAK
Trigger: TTTTGCAGTTATCCACACTCACATTTCAGAGTCCTG...GAGCCTCTCTTTCTTGGGCACCTTTATTTTAAAGGTGGCAGAGAGCCTCCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392834.7
ENST00000640747.1
CDS-3UTR TCA 90 bp TCAGAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTTCCTTGCCCGGTTCCAAGATaGATGCCTCCTTGTACCACG +
Preference number: 4 (lower is better)
Translates to: SEHLIYNQMTCHRGACVPCPVPR*MPPCTT
Trigger: CGTGGTACAAGGAGGCATTCATCTTGGAACCGGGCA...AGGAACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR GCA 90 bp CATGTTGTTACATTCAGTGAATTCACCATCTTCAGTCTCACTCTGGTGTACTGTATTCCCAAGTCCAGATaGAGGCCAAGTATCGGGCGG +
Preference number: 4 (lower is better)
Translates to: HVVTFSEFTIFSLTLVYCIPKSR*RPSIGR
Trigger: CCGCCCGATACTTGGCCTGCATCTGGACTTGGGAAT...ACAGTACACCAGAGTGAGACTGAAGATGGTGAATTCACTGAATGTAACAACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000442480.1
ENST00000640102.1
ENST00000640747.1
CDS-3UTR GCA 90 bp GATGAGGGTCATGTTGTTACATTCAGTGAATTCACCATCTTCAGTCTCACTCTGTCCCTTAATCTGGGATaGCTCCGGCTCCAGGAAGAT +
Preference number: 4 (lower is better)
Translates to: DEGHVVTFSEFTIFSLTLSLNLG*LRLQED
Trigger: ATCTTCCTGGAGCCGGAGGCATCCCAGATTAAGGGA...CAGAGTGAGACTGAAGATGGTGAATTCACTGAATGTAACAACATGACCCTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442480.1
CDS-3UTR GCA 90 bp TCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAATGTGAGTGTAATCCAGAGCGGAAATaGCAATTGCCCGGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: SIPKTSGSLRVRTLKCECNPERK*QLPGSK
Trigger: CTTGGAACCGGGCAATTGGCATTTCCGCTCTGGATT...ACACTCACATTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR CCA 90 bp AGGACAATGATCAAGGGACTCAGACATCATAGAAGAGTCGAACGAGCTGATATCGAAATGACTAGTGACTaGCCAGCCTCTAGGCCGTTA +
Preference number: 4 (lower is better)
Translates to: RTMIKGLRHHRRVERADIEMTSD*PASRPL
Trigger: TAACGGCCTAGAGGCTGGCCAGTCACTAGTCATTTC...GATATCAGCTCGTTCGACTCTTCTATGATGTCTGAGTCCCTTGATCATTGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000442480.1
ENST00000636404.1
ENST00000638850.1
ENST00000640747.1
CDS-3UTR CCA 90 bp ATAAGAAAAAGACAACACTTTATTGTCTCCATTGAGAGCATGTGGCCCCCTGCTTGTACTGTCACCAGCTaGAGGCTCTCTGCCACCTTT +
Preference number: 4 (lower is better)
Translates to: IRKRQHFIVSIESMWPPACTVTS*RLSATF
Trigger: AAAGGTGGCAGAGAGCCTCCAGCTGGTGACAGTACA...AGCAGGGGGCCACATGCTCTCAATGGAGACAATAAAGTGTTGTCTTTTTCTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR CCA 90 bp TGTATGGGCCCAAGGACTTTAAGTAGCAAGTTGATGAGGGTCATGTTGTTACATTGTACTGTCACCAGCTaGAGGCTCTCTGCCACCTTT +
Preference number: 4 (lower is better)
Translates to: CMGPRTLSSKLMRVMLLHCTVTS*RLSATF
Trigger: AAAGGTGGCAGAGAGCCTCCAGCTGGTGACAGTACA...ATGTAACAACATGACCCTCATCAACTTGCTACTTAAAGTCCTTGGGCCCATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000442480.1
ENST00000640102.1
ENST00000640747.1
CDS-3UTR CCA 90 bp GAGAGTAGCAAGTTGCAGAAAGCCATAGGTAAAATCCAATCAGTAGTCAGCAGATGTACTGTCACCAGCTaGAGGCTCTCTGCCACCTTT +
Preference number: 4 (lower is better)
Translates to: ESSKLQKAIGKIQSVVSRCTVTS*RLSATF
Trigger: AAAGGTGGCAGAGAGCCTCCAGCTGGTGACAGTACA...TCTGCTGACTACTGATTGGATTTTACCTATGGCTTTCTGCAACTTGCTACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CCA 90 bp CACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTTCCTAGCCCTACCGCGATTGCAAGATaGGGCGAGGTGATCAAAGAT +
Preference number: 4 (lower is better)
Translates to: HLIYNQMTCHRGACVPSPTAIAR*GEVIKD
Trigger: ATCTTTGATCACCTCGCCCCATCTTGCAATCGCGGT...AGGGCTAGGAACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR CCA 90 bp TTACTAATCAGAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGGGAGGGACGAGGGTGTaGAGACGCGCCTGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: LLIRTLNLQSNDMSPWSLGGTRV*RRACFL
Trigger: CAAGAAACAGGCGCGTCTCCACACCCTCGTCCCTCC...CAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTCTGATTAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR CCA 90 bp CTAATCAGAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTACCTCTCCCTTAATCTaGGATGCCTCCGGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LIRTLNLQSNDMSPWSLCTSPLI*DASGSR
Trigger: CCTGGAGCCGGAGGCATCCCAGATTAAGGGAGAGGT...ACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTCTGATTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR CCA 90 bp ACAATGATGGAAGCAGAAATGACTAGTGACTGGCCAGCCTCTAGGCCGTTAATTATGACTCAAGCTTCATaGTGGGGGAATGCCTTACAC +
Preference number: 4 (lower is better)
Translates to: TMMEAEMTSDWPASRPLIMTQAS*WGNALH
Trigger: GTGTAAGGCATTCCCCCACCATGAAGCTTGAGTCAT...AATTAACGGCCTAGAGGCTGGCCAGTCACTAGTCATTTCTGCTTCCATCATTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414373.5
CDS-3UTR CCA 90 bp TGTATGGGCCCAAGGACTTTAAGTAGCAAGTTGATGAGGGTCATGTTGTTACATAAGGAGGGCACTTCATaGTGGGGGAATGCCTTACAC +
Preference number: 4 (lower is better)
Translates to: CMGPRTLSSKLMRVMLLHKEGTS*WGNALH
Trigger: GTGTAAGGCATTCCCCCACCATGAAGTGCCCTCCTT...ATGTAACAACATGACCCTCATCAACTTGCTACTTAAAGTCCTTGGGCCCATACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640747.1
CDS-3UTR TCA 90 bp ACTTTAAGTAGCAAGTTGATGAGGGTCATGTTGTTACATTCAGTGAATTCACCAAAAACCCAGCAACTCTaGCTTGAGCCGCCGTCGGGA +
Preference number: 4 (lower is better)
Translates to: TLSSKLMRVMLLHSVNSPKTQQL*LEPPSG
Trigger: TCCCGACGGCGGCTCAAGTCAGAGTTGCTGGGTTTT...TGGTGAATTCACTGAATGTAACAACATGACCCTCATCAACTTGCTACTTAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
CDS-3UTR TCA 90 bp TGTATGGGCCCAAGGACTTTAAGTAGCAAGTTGATGAGGGTCATGTTGTTACATCTTCCCACACCAATCTaGGCAAAACCCAGCAACTCT +
Preference number: 4 (lower is better)
Translates to: CMGPRTLSSKLMRVMLLHLPTPI*AKPSNS
Trigger: AGAGTTGCTGGGTTTTGCTCAGATTGGTGTGGGAAG...ATGTAACAACATGACCCTCATCAACTTGCTACTTAAAGTCCTTGGGCCCATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
CDS-3UTR TCA 90 bp TCAGAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTTCCTTCCCACAAACACCCGTaGTGGGTACCAGTTGTGGTA +
Preference number: 4 (lower is better)
Translates to: SEHLIYNQMTCHRGACVPSHKHP*WVPVVV
Trigger: TACCACAACTGGTACCCATCACGGGTGTTTGTGGGA...AGGAACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
CDS-3UTR TCA 90 bp AGCAAGTTGATGAGGGTCATGTTGTTACATTCAGTGAATTCACCATCTTCAGTCCAGGAGCTGAGGCAGTaGGTAGAGGAAGTTGAACAC +
Preference number: 4 (lower is better)
Translates to: SKLMRVMLLHSVNSPSSVQELRQ*VEEVEH
Trigger: GTGTTCAACTTCCTCTACTCACTGCCTCAGCTCCTG...GACTGAAGATGGTGAATTCACTGAATGTAACAACATGACCCTCATCAACTTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392834.7
ENST00000442480.1
ENST00000638850.1
ENST00000640102.1
ENST00000640747.1
CDS-3UTR TCA 90 bp GAAGAGTCGAACGAGCTGATATCGAATGGAGAAGGTGATGGCACTGCCCAGGATTGTTGTTACATTCAGTaGATTCACCATCTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: EESNELISNGEGDGTAQDCCYIQ*IHHLQS
Trigger: AGACTGAAGATGGTGAATTCACTGAATGTAACAACA...ATCCTGGGCAGTGCCATCACCTTCTCCATTCGATATCAGCTCGTTCGACTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000442480.1
ENST00000638850.1
ENST00000640747.1
CDS-3UTR TCA 90 bp GTTCCTAGCCCTGGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCTGTTGTTACATTCAGTaGATTCACCATCTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: VPSPGPSSIPKTSGSLRVCCYIQ*IHHLQS
Trigger: AGACTGAAGATGGTGAATTCACTGAATGTAACAACA...GACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCCAGGGCTAGGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp ATAAGAAAAAGACAACACTTTATTGTCTCCATTGAGAGCATGTGGCCCCCTGCTGCAGCAGGAGCAATGTaGGGTTTCTCTCATGTATGG +
Preference number: 4 (lower is better)
Translates to: IRKRQHFIVSIESMWPPAAAGAM*GFSHVW
Trigger: CCATACATGAGAGAAACCTCACATTGCTCCTGCTGC...AGCAGGGGGCCACATGCTCTCAATGGAGACAATAAAGTGTTGTCTTTTTCTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR TCA 90 bp AAAGGGTATCATGAAGTAGAGGGAAAAGACATGATCATCCCGACAATCACCTTCGCAGCAGGAGCAATGTaGGGTTTCTCTCATGTATGG +
Preference number: 4 (lower is better)
Translates to: KGYHEVEGKDMIIPTITFAAGAM*GFSHVW
Trigger: CCATACATGAGAGAAACCTCACATTGCTCCTGCTGC...GAAGGTGATTGTCGGGATGATCATGTCTTTTCCCTCTACTTCATGATACCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
CDS-3UTR TCA 90 bp CAAGTTGATGAGGGTCATGTTGTTACATTCAGTGAATTCACCATCTTCAGTCTCATCGAATGGAGAAGGTaGTGGCACTGCCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: QVDEGHVVTFSEFTIFSLIEWRR*WHCPGS
Trigger: AGATCCTGGGCAGTGCCATCACCTTCTCCATTCGAT...GAGACTGAAGATGGTGAATTCACTGAATGTAACAACATGACCCTCATCAACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000442480.1
ENST00000638850.1
ENST00000640747.1
CDS-3UTR TCA 90 bp AGCAAGTTGATGAGGGTCATGTTGTTACATTCAGTGAATTCACCATCTTCAGTCATCGAATGGAGAAGGTaGTGGCACTGCCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: SKLMRVMLLHSVNSPSSVIEWRR*WHCPGS
Trigger: AGATCCTGGGCAGTGCCATCACCTTCTCCATTCGAT...GACTGAAGATGGTGAATTCACTGAATGTAACAACATGACCCTCATCAACTTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000442480.1
ENST00000638850.1
ENST00000640747.1
CDS-3UTR TCA 90 bp ACAATGATCAAGGGACTCAGACATCATAGAAGAGTCGAACGAGCTGATATCGAAAAATCTGGAGGAGTATaGAGAGTGAGAGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: TMIKGLRHHRRVERADIEKSGGV*RVREAW
Trigger: CCAGGCCTCTCTCACTCTTCATACTCCTCCAGATTT...TTCGATATCAGCTCGTTCGACTCTTCTATGATGTCTGAGTCCCTTGATCATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000640747.1
CDS-3UTR TCA 90 bp GGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAACAGGACTCTGAAATGTaGGTGTGGATAACTGCAAAA +
Preference number: 4 (lower is better)
Translates to: GPSSIPKTSGSLRVRTLKQDSEM*VWITAK
Trigger: TTTTGCAGTTATCCACACTCACATTTCAGAGTCCTG...TTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp AAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCCAGGACTCTGAAATGTaGGTGTGGATAACTGCAAAA +
Preference number: 4 (lower is better)
Translates to: KIQSVVSRGQETPRMPMIQDSEM*VWITAK
Trigger: TTTTGCAGTTATCCACACTCACATTTCAGAGTCCTG...GATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp TGGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAACAGGACTCTGAAATGTaGGTGTGGATAACTGCAAAA +
Preference number: 4 (lower is better)
Translates to: WPKFYPKNQWFLESQDSEQDSEM*VWITAK
Trigger: TTTTGCAGTTATCCACACTCACATTTCAGAGTCCTG...TTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR GCA 90 bp TATCATGAAGTAGAGGGAAAAGACATGATCATCCCGACAATCACCTTCCAACTCTGGGATTCTGGGATCTaGTGTCGGCTGGTTTTGTTG +
Preference number: 4 (lower is better)
Translates to: YHEVEGKDMIIPTITFQLWDSGI*CRLVLL
Trigger: CAACAAAACCAGCCGACAGCAGATCCCAGAATCCCA...GAGTTGGAAGGTGATTGTCGGGATGATCATGTCTTTTCCCTCTACTTCATGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414373.5
ENST00000640747.1
CDS-3UTR GCA 90 bp GAGAGTAGCAAGTTGCAGAAAGCCATAGGTAAAATCCAATCAGTAGTCAGCAGATTCATGGTGGGGGAATaGCTTACACTGCTCCTTCAC +
Preference number: 4 (lower is better)
Translates to: ESSKLQKAIGKIQSVVSRFMVGE*LTLLLH
Trigger: GTGAAGGAGCAGTGTAAGGCATTCCCCCACCATGAA...TCTGCTGACTACTGATTGGATTTTACCTATGGCTTTCTGCAACTTGCTACTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354202.9
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR GCA 90 bp ATAAGAAAAAGACAACACTTTATTGTCTCCATTGAGAGCATGTGGCCCCCTGCTATTGGTACAGAACACTaGCAGCAGCCCCATGTAGAC +
Preference number: 4 (lower is better)
Translates to: IRKRQHFIVSIESMWPPAIGTEH*QQPHVD
Trigger: GTCTACATGGGGCTGCTGGCAGTGTTCTGTACCAAT...AGCAGGGGGCCACATGCTCTCAATGGAGACAATAAAGTGTTGTCTTTTTCTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR GCA 90 bp GAGAGTAGCAAGTTGCAGAAAGCCATAGGTAAAATCCAATCAGTAGTCAGCAGAATTGGTACAGAACACTaGCAGCAGCCCCATGTAGAC +
Preference number: 4 (lower is better)
Translates to: ESSKLQKAIGKIQSVVSRIGTEH*QQPHVD
Trigger: GTCTACATGGGGCTGCTGGCAGTGTTCTGTACCAAT...TCTGCTGACTACTGATTGGATTTTACCTATGGCTTTCTGCAACTTGCTACTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR GCA 90 bp TTACTAATCAGAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTTCGCCTGGCTGCTaGAATATGCCCGGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: LLIRTLNLQSNDMSPWSLCSPGC*NMPGAC
Trigger: ACAAGCCCCGGGCATATTGCAGCAGCCAGGCGAACA...CAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTCTGATTAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR CCA 90 bp TTACTAATCAGAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGCACTCCCTGGGATTCTaGGATCTGCTGTCGGCTGGT +
Preference number: 4 (lower is better)
Translates to: LLIRTLNLQSNDMSPWSLHSLGF*DLLSAG
Trigger: ACCAGCCGACAGCAGATCCCAGAATCCCAGGGAGTG...CAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTCTGATTAGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354202.9
ENST00000409993.6
ENST00000414373.5
CDS-3UTR CCA 90 bp CTAATCAGAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTGGTAGCAGCAGCTTATaGCGCCAGCGCAGATTCAGT +
Preference number: 4 (lower is better)
Translates to: LIRTLNLQSNDMSPWSLCGSSSL*RQRRFS
Trigger: ACTGAATCTGCGCTGGCGCCATAAGCTGCTGCTACC...ACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTCTGATTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
CDS-3UTR CCA 90 bp AGCAAGTTGATGAGGGTCATGTTGTTACATTCAGTGAATTCACCATCTTCAGTCGCTTGGGCACCACAATaGTCGTGTTGCCAAAGTTGG +
Preference number: 4 (lower is better)
Translates to: SKLMRVMLLHSVNSPSSVAWAPQ*SCCQSW
Trigger: CCAACTTTGGCAACACGACCATTGTGGTGCCCAAGC...GACTGAAGATGGTGAATTCACTGAATGTAACAACATGACCCTCATCAACTTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000442480.1
ENST00000640102.1
ENST00000640747.1
CDS-3UTR CCA 90 bp GAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTTCCTAGCGAAATGACTAGTGACTaGCCAGCCTCTAGGCCGTTA +
Preference number: 4 (lower is better)
Translates to: EHLIYNQMTCHRGACVPSEMTSD*PASRPL
Trigger: TAACGGCCTAGAGGCTGGCCAGTCACTAGTCATTTC...GCTAGGAACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
CDS-3UTR TCA 90 bp CTAATCAGAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTGTAGCATGGTCTTGCTaGAGTGTCCCAAGATGCCCA +
Preference number: 4 (lower is better)
Translates to: LIRTLNLQSNDMSPWSLCVAWSC*SVPRCP
Trigger: TGGGCATCTTGGGACACTTCAGCAAGACCATGCTAC...ACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTCTGATTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
CDS-3UTR TCA 90 bp ATGTTGTTACATTCAGTGAATTCACCATCTTCAGTCTCACTCTGGTGTACTGTCGCAGCAGGAGCAATGTaGGGTTTCTCTCATGTATGG +
Preference number: 4 (lower is better)
Translates to: MLLHSVNSPSSVSLWCTVAAGAM*GFSHVW
Trigger: CCATACATGAGAGAAACCTCACATTGCTCCTGCTGC...GACAGTACACCAGAGTGAGACTGAAGATGGTGAATTCACTGAATGTAACAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000442480.1
ENST00000638850.1
ENST00000640102.1
ENST00000640747.1
CDS-3UTR GCA 90 bp GAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTTCCTAGCGGGAATGCCTTACACTaGTCCTTCACAAAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: EHLIYNQMTCHRGACVPSGNALH*SFTKQF
Trigger: GAACTGCTTTGTGAAGGAGCAGTGTAAGGCATTCCC...GCTAGGAACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354202.9
ENST00000409993.6
ENST00000414373.5
CDS-3UTR GCA 90 bp GAGAGTAGCAAGTTGCAGAAAGCCATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGAATGCCTTACACTaGTCCTTCACAAAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: ESSKLQKAIGKIQSVVSRGNALH*SFTKQF
Trigger: GAACTGCTTTGTGAAGGAGCAGTGTAAGGCATTCCC...TCTGCTGACTACTGATTGGATTTTACCTATGGCTTTCTGCAACTTGCTACTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354202.9
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR GCA 90 bp AGCAAGTTGATGAGGGTCATGTTGTTACATTCAGTGAATTCACCATCTTCAGTCTTCATGGTGGGGGAATaGCTTACACTGCTCCTTCAC +
Preference number: 4 (lower is better)
Translates to: SKLMRVMLLHSVNSPSSVFMVGE*LTLLLH
Trigger: GTGAAGGAGCAGTGTAAGGCATTCCCCCACCATGAA...GACTGAAGATGGTGAATTCACTGAATGTAACAACATGACCCTCATCAACTTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414373.5
ENST00000640747.1
CDS-3UTR GCA 90 bp TTACTAATCAGAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGATTCCCAAGTCCAGATaGAGGCCAAGTATCGGGCGG +
Preference number: 4 (lower is better)
Translates to: LLIRTLNLQSNDMSPWSLIPKSR*RPSIGR
Trigger: CCGCCCGATACTTGGCCTGCATCTGGACTTGGGAAT...CAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTCTGATTAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
CDS-3UTR GCA 90 bp CAAGTTGATGAGGGTCATGTTGTTACATTCAGTGAATTCACCATCTTCAGTCTCATTGGTACAGAACACTaGCAGCAGCCCCATGTAGAC +
Preference number: 4 (lower is better)
Translates to: QVDEGHVVTFSEFTIFSLIGTEH*QQPHVD
Trigger: GTCTACATGGGGCTGCTGGCAGTGTTCTGTACCAAT...GAGACTGAAGATGGTGAATTCACTGAATGTAACAACATGACCCTCATCAACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000442480.1
ENST00000638850.1
ENST00000640102.1
ENST00000640747.1
CDS-3UTR GCA 90 bp TCAGAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTTCCTCCACGGCAAAGGTCATaGCAGCAAAGTAACAGAAGG +
Preference number: 4 (lower is better)
Translates to: SEHLIYNQMTCHRGACVPPRQRS*QQSNRR
Trigger: CCTTCTGTTACTTTGCTGGCATGACCTTTGCCGTGG...AGGAACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
CDS-3UTR CCA 90 bp TTACTAATCAGAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGCCGCTGATCACTCCCTaGGATTCTGGGATCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LLIRTLNLQSNDMSPWSLPLITP*DSGICC
Trigger: ACAGCAGATCCCAGAATCCCAGGGAGTGATCAGCGG...CAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTCTGATTAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354202.9
ENST00000409993.6
ENST00000414373.5
CDS-3UTR CCA 90 bp CTAATCAGAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTGCTTGGGCACCACAATaGTCGTGTTGCCAAAGTTGG +
Preference number: 4 (lower is better)
Translates to: LIRTLNLQSNDMSPWSLCAWAPQ*SCCQSW
Trigger: CCAACTTTGGCAACACGACCATTGTGGTGCCCAAGC...ACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTCTGATTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
CDS-3UTR CCA 90 bp AGCAAGTTGCAGAAAGCCATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAAGGAAGTTGAACACCTaGGGCATGAAGAATAGTAGC +
Preference number: 4 (lower is better)
Translates to: SKLQKAIGKIQSVVSRGQRKLNT*GMKNSS
Trigger: GCTACTATTCTTCATGCCCCAGGTGTTCAACTTCCT...TTGCCCTCTGCTGACTACTGATTGGATTTTACCTATGGCTTTCTGCAACTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CCA 90 bp TCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAATGTGAGTGTAGGAAGTTGAACACCTaGGGCATGAAGAATAGTAGC +
Preference number: 4 (lower is better)
Translates to: SIPKTSGSLRVRTLKCECRKLNT*GMKNSS
Trigger: GCTACTATTCTTCATGCCCCAGGTGTTCAACTTCCT...ACACTCACATTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp ATCAAGGGACTCAGACATCATAGAAGAGTCGAACGAGCTGATATCGAATGGAGATTCCTGCTAGGATATTaGTGGCATTGGTACAGAACA +
Preference number: 4 (lower is better)
Translates to: IKGLRHHRRVERADIEWRFLLGY*WHWYRT
Trigger: TGTTCTGTACCAATGCCATCAATATCCTAGCAGGAA...TCTCCATTCGATATCAGCTCGTTCGACTCTTCTATGATGTCTGAGTCCCTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000442480.1
ENST00000636404.1
ENST00000638850.1
ENST00000640747.1
CDS-3UTR TCA 90 bp AGGACAATGATCAAGGGACTCAGACATCATAGAAGAGTCGAACGAGCTGATATCTTCCTGCTAGGATATTaGTGGCATTGGTACAGAACA +
Preference number: 4 (lower is better)
Translates to: RTMIKGLRHHRRVERADIFLLGY*WHWYRT
Trigger: TGTTCTGTACCAATGCCATCAATATCCTAGCAGGAA...GATATCAGCTCGTTCGACTCTTCTATGATGTCTGAGTCCCTTGATCATTGTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000442480.1
ENST00000636404.1
ENST00000638850.1
ENST00000640747.1
CDS-3UTR TCA 90 bp AAAGCCATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGTGTTGTTACATTCAGTaGATTCACCATCTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: KAIGKIQSVVSRGQETPRCCYIQ*IHHLQS
Trigger: AGACTGAAGATGGTGAATTCACTGAATGTAACAACA...CCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTTACCTATGGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp GGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAATGTTGTTACATTCAGTaGATTCACCATCTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: GPSSIPKTSGSLRVRTLKCCYIQ*IHHLQS
Trigger: AGACTGAAGATGGTGAATTCACTGAATGTAACAACA...TTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR TCA 90 bp AAGTTGAACACCTGGGGCATGAAGAATAGTAGCATGGTCTTGCTGAAGTGTCCCTGTTGTTACATTCAGTaGATTCACCATCTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: KLNTWGMKNSSMVLLKCPCCYIQ*IHHLQS
Trigger: AGACTGAAGATGGTGAATTCACTGAATGTAACAACA...GGGACACTTCAGCAAGACCATGCTACTATTCTTCATGCCCCAGGTGTTCAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000640102.1
ENST00000640747.1
CDS-3UTR TCA 90 bp TCAGAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTTCCTAAGAGTCGAACGAGCTaGTATCGAATGGAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: SEHLIYNQMTCHRGACVPKSRTS*YRMEKV
Trigger: CACCTTCTCCATTCGATATCAGCTCGTTCGACTCTT...AGGAACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
CDS-3UTR TCA 90 bp TTGATGAGGGTCATGTTGTTACATTCAGTGAATTCACCATCTTCAGTCTCACTCAAGAGTCGAACGAGCTaGTATCGAATGGAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: LMRVMLLHSVNSPSSVSLKSRTS*YRMEKV
Trigger: CACCTTCTCCATTCGATATCAGCTCGTTCGACTCTT...GAGTGAGACTGAAGATGGTGAATTCACTGAATGTAACAACATGACCCTCATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000442480.1
ENST00000638850.1
ENST00000640747.1
CDS-3UTR TCA 90 bp TTACTAATCAGAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGCTGTATCCCACCCTATaGGGCTGCAAAGATGGGATG +
Preference number: 4 (lower is better)
Translates to: LLIRTLNLQSNDMSPWSLLYPTL*GCKDGM
Trigger: CATCCCATCTTTGCAGCCTCATAGGGTGGGATACAG...CAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTCTGATTAGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
CDS-3UTR GCA 90 bp CTAATCAGAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTTGGGATTCTGGGATCTaGTGTCGGCTGGTTTTGTTG +
Preference number: 4 (lower is better)
Translates to: LIRTLNLQSNDMSPWSLCWDSGI*CRLVLL
Trigger: CAACAAAACCAGCCGACAGCAGATCCCAGAATCCCA...ACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTCTGATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354202.9
ENST00000409993.6
ENST00000414373.5
CDS-3UTR CCA 90 bp AGTAGCAAGTTGATGAGGGTCATGTTGTTACATTCAGTGAATTCACCATCTTCAGAAATGACTAGTGACTaGCCAGCCTCTAGGCCGTTA +
Preference number: 4 (lower is better)
Translates to: SSKLMRVMLLHSVNSPSSEMTSD*PASRPL
Trigger: TAACGGCCTAGAGGCTGGCCAGTCACTAGTCATTTC...TGAAGATGGTGAATTCACTGAATGTAACAACATGACCCTCATCAACTTGCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000442480.1
ENST00000638850.1
ENST00000640102.1
ENST00000640747.1
CDS-3UTR CCA 90 bp GAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTTCCTAGCAGGAAGTTGAACACCTaGGGCATGAAGAATAGTAGC +
Preference number: 4 (lower is better)
Translates to: EHLIYNQMTCHRGACVPSRKLNT*GMKNSS
Trigger: GCTACTATTCTTCATGCCCCAGGTGTTCAACTTCCT...GCTAGGAACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
CDS-3UTR CCA 90 bp GATGAGGGTCATGTTGTTACATTCAGTGAATTCACCATCTTCAGTCTCACTCTGAGGAAGTTGAACACCTaGGGCATGAAGAATAGTAGC +
Preference number: 4 (lower is better)
Translates to: DEGHVVTFSEFTIFSLTLRKLNT*GMKNSS
Trigger: GCTACTATTCTTCATGCCCCAGGTGTTCAACTTCCT...CAGAGTGAGACTGAAGATGGTGAATTCACTGAATGTAACAACATGACCCTCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000638850.1
ENST00000640102.1
ENST00000640747.1
CDS-3UTR TCA 90 bp ACAATGATCAAGGGACTCAGACATCATAGAAGAGTCGAACGAGCTGATATCGAATTCCTGCTAGGATATTaGTGGCATTGGTACAGAACA +
Preference number: 4 (lower is better)
Translates to: TMIKGLRHHRRVERADIEFLLGY*WHWYRT
Trigger: TGTTCTGTACCAATGCCATCAATATCCTAGCAGGAA...TTCGATATCAGCTCGTTCGACTCTTCTATGATGTCTGAGTCCCTTGATCATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000442480.1
ENST00000636404.1
ENST00000638850.1
ENST00000640747.1
CDS-3UTR TCA 90 bp TATCATGAAGTAGAGGGAAAAGACATGATCATCCCGACAATCACCTTCCAACTCTTCCTGCTAGGATATTaGTGGCATTGGTACAGAACA +
Preference number: 4 (lower is better)
Translates to: YHEVEGKDMIIPTITFQLFLLGY*WHWYRT
Trigger: TGTTCTGTACCAATGCCATCAATATCCTAGCAGGAA...GAGTTGGAAGGTGATTGTCGGGATGATCATGTCTTTTCCCTCTACTTCATGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
CDS-3UTR TCA 90 bp TTGATGAGGGTCATGTTGTTACATTCAGTGAATTCACCATCTTCAGTCTCACTCAGAGGCTCTTGGTCTTaGACTTGGAATAGCTCATCT +
Preference number: 4 (lower is better)
Translates to: LMRVMLLHSVNSPSSVSLRGSWS*TWNSSS
Trigger: AGATGAGCTATTCCAAGTTCAAGACCAAGAGCCTCT...GAGTGAGACTGAAGATGGTGAATTCACTGAATGTAACAACATGACCCTCATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392834.7
ENST00000442480.1
ENST00000638850.1
ENST00000640102.1
ENST00000640747.1
CDS-3UTR TCA 90 bp TTACTAATCAGAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGAAATCTGGAGGAGTATaGAGAGTGAGAGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LLIRTLNLQSNDMSPWSLKSGGV*RVREAW
Trigger: CCAGGCCTCTCTCACTCTTCATACTCCTCCAGATTT...CAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTCTGATTAGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
CDS-3UTR GCA 90 bp CTAATCAGAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTGAGCATGTGGCCCCCTaGTTAGTTCTTACTAATCAG +
Preference number: 4 (lower is better)
Translates to: LIRTLNLQSNDMSPWSLCEHVAP*LVLTNQ
Trigger: CTGATTAGTAAGAACTAAGCAGGGGGCCACATGCTC...ACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTCTGATTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
CDS-3UTR CCA 90 bp TTACTAATCAGAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGGCCACAAATTCATGGTaGGGGAATGCCTTACACTGC +
Preference number: 4 (lower is better)
Translates to: LLIRTLNLQSNDMSPWSLATNSW*GNALHC
Trigger: GCAGTGTAAGGCATTCCCCCACCATGAATTTGTGGC...CAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTCTGATTAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354202.9
ENST00000409993.6
CDS-3UTR CCA 90 bp TCAGAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTTCCTAGGAAGTTGAACACCTaGGGCATGAAGAATAGTAGC +
Preference number: 4 (lower is better)
Translates to: SEHLIYNQMTCHRGACVPRKLNT*GMKNSS
Trigger: GCTACTATTCTTCATGCCCCAGGTGTTCAACTTCCT...AGGAACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
CDS-3UTR CCA 90 bp CAAGTTGATGAGGGTCATGTTGTTACATTCAGTGAATTCACCATCTTCAGTCTCAGGAAGTTGAACACCTaGGGCATGAAGAATAGTAGC +
Preference number: 4 (lower is better)
Translates to: QVDEGHVVTFSEFTIFSLRKLNT*GMKNSS
Trigger: GCTACTATTCTTCATGCCCCAGGTGTTCAACTTCCT...GAGACTGAAGATGGTGAATTCACTGAATGTAACAACATGACCCTCATCAACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000638850.1
ENST00000640102.1
ENST00000640747.1
3UTR CAA 72 bp CTCTCATGTATGGGCCCAAGGACTTTAAGTAGCAAGTaGATGAGGGTCATGTTGTTACATTCAGTGAATTCA +
Preference number: 4 (lower is better)
Translates to: LSCMGPRTLSSK*MRVMLLHSVNS
Trigger: TGAATTCACTGAATGTAACAACATGACCCTCATCAACTTGCTACTTAAAGTCCTTGGGCCCATACATGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000442480.1
ENST00000638850.1
ENST00000640102.1
ENST00000640747.1
CDS-3UTR TCA 90 bp CTAATCAGAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTAGAGGCTCTTGGTCTTaGACTTGGAATAGCTCATCT +
Preference number: 4 (lower is better)
Translates to: LIRTLNLQSNDMSPWSLCRGSWS*TWNSSS
Trigger: AGATGAGCTATTCCAAGTTCAAGACCAAGAGCCTCT...ACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTCTGATTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
CDS-3UTR TCA 90 bp TCAAGGGACTCAGACATCATAGAAGAGTCGAACGAGCTGATATCGAATGGAGAATGTTGTTACATTCAGTaGATTCACCATCTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: SRDSDIIEESNELISNGECCYIQ*IHHLQS
Trigger: AGACTGAAGATGGTGAATTCACTGAATGTAACAACA...TTCTCCATTCGATATCAGCTCGTTCGACTCTTCTATGATGTCTGAGTCCCTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000442480.1
ENST00000638850.1
ENST00000640747.1
CDS-3UTR TCA 90 bp AGGACTTTAAGTAGCAAGTTGATGAGGGTCATGTTGTTACATTCAGTGAATTCAAAGAGTCGAACGAGCTaGTATCGAATGGAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: RTLSSKLMRVMLLHSVNSKSRTS*YRMEKV
Trigger: CACCTTCTCCATTCGATATCAGCTCGTTCGACTCTT...TGAATTCACTGAATGTAACAACATGACCCTCATCAACTTGCTACTTAAAGTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000442480.1
ENST00000638850.1
ENST00000640747.1
CDS-3UTR TCA 90 bp ACTTTAAGTAGCAAGTTGATGAGGGTCATGTTGTTACATTCAGTGAATTCACCAAGAGGCTCTTGGTCTTaGACTTGGAATAGCTCATCT +
Preference number: 4 (lower is better)
Translates to: TLSSKLMRVMLLHSVNSPRGSWS*TWNSSS
Trigger: AGATGAGCTATTCCAAGTTCAAGACCAAGAGCCTCT...TGGTGAATTCACTGAATGTAACAACATGACCCTCATCAACTTGCTACTTAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392834.7
ENST00000442480.1
ENST00000638850.1
ENST00000640102.1
ENST00000640747.1
3UTR CAA 72 bp CCAAGGACTTTAAGTAGCAAGTTGATGAGGGTCATGTaGTTACATTCAGTGAATTCACCATCTTCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: PRTLSSKLMRVM*LHSVNSPSSVS
Trigger: TGAGACTGAAGATGGTGAATTCACTGAATGTAACAACATGACCCTCATCAACTTGCTACTTAAAGTCCTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000442480.1
ENST00000638850.1
ENST00000640102.1
ENST00000640747.1
CDS CCA 90 bp CGGGTGAGCCCCAGCCGGGACCGGGATCGGAGCCCGCGCGGAGCATaGATCCGGGCTGGGGGCAGCGGGACGTGGGCTGGGCGGCCTTGC +
Preference number: 5 (lower is better)
Translates to: RVSPSRDRDRSPRGA*IRAGGSGTWAGRPC
Trigger: GCAAGGCCGCCCAGCCCACGTCCCGCTGCCCCCAGCCCGGATCCATGCTCCGCGCGGGCTCCGATCCCGGTCCCGGCTGGGGCTCACCCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS CCA 90 bp CCCGCGCGGAGCATGGATCCGGGCTGGGGGCAGCGGGACGTGGGCTaGGCGGCCTTGCTGATCCTCTTCGCCGCCTCGCTGCTCACGGTG +
Preference number: 5 (lower is better)
Translates to: PARSMDPGWGQRDVG*AALLILFAASLLTV
Trigger: CACCGTGAGCAGCGAGGCGGCGAAGAGGATCAGCAAGGCCGCCCAGCCCACGTCCCGCTGCCCCCAGCCCGGATCCATGCTCCGCGCGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS CCA 90 bp CAGCCGGGACCGGGATCGGAGCCCGCGCGGAGCATGGATCCGGGCTaGGGGCAGCGGGACGTGGGCTGGGCGGCCTTGCTGATCCTCTTC +
Preference number: 5 (lower is better)
Translates to: QPGPGSEPARSMDPG*GQRDVGWAALLILF
Trigger: GAAGAGGATCAGCAAGGCCGCCCAGCCCACGTCCCGCTGCCCCCAGCCCGGATCCATGCTCCGCGCGGGCTCCGATCCCGGTCCCGGCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS CCA 90 bp TCTCTGCAGACCAGTCCCCTCCAGGGTCCGGCGGGGCCCGCGCGGTaGGAGGAGTCGGGCACTGGCCGGCGACTAACGGGTCCGACTGCT +
Preference number: 5 (lower is better)
Translates to: SLQTSPLQGPAGPAR*EESGTGRRLTGPTA
Trigger: AGCAGTCGGACCCGTTAGTCGCCGGCCAGTGCCCGACTCCTCCCACCGCGCGGGCCCCGCCGGACCCTGGAGGGGACTGGTCTGCAGAGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS TCA 90 bp TGGATCCGGGCTGGGGGCAGCGGGACGTGGGCTGGGCGGCCTTGCTaGTCCTCTTCGCCGCCTCGCTGCTCACGGTGTTCGCCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: WIRAGGSGTWAGRPC*SSSPPRCSRCSPGC
Trigger: GCAGCCAGGCGAACACCGTGAGCAGCGAGGCGGCGAAGAGGATCAGCAAGGCCGCCCAGCCCACGTCCCGCTGCCCCCAGCCCGGATCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS CCA 90 bp GCCTTGCTGATCCTCTTCGCCGCCTCGCTGCTCACGGTGTTCGCCTaGCTGCTGCAATATGCCCGGGGCTTGTGGCTGGCGCGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: ALLILFAASLLTVFA*LLQYARGLWLARAR
Trigger: GCGGGCCCGCGCCAGCCACAAGCCCCGGGCATATTGCAGCAGCCAGGCGAACACCGTGAGCAGCGAGGCGGCGAAGAGGATCAGCAAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS TCA 90 bp GGCTCCGCCGCCTCTTCAGGTAACGGGCAAGCTGAGCAGCAGTCCTaGGGCCTCAGCAGTATGGAGTGGCCGCTCCCCACAGGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: GSAASSGNGQAEQQS*GLSSMEWPLPTGRL
Trigger: GAGCCTGCCTGTGGGGAGCGGCCACTCCATACTGCTGAGGCCTCAGGACTGCTGCTCAGCTTGCCCGTTACCTGAAGAGGCGGCGGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 35 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000445653.6
ENST00000460183.1
ENST00000472016.1
ENST00000481084.5
ENST00000530052.2
ENST00000639704.1
ENST00000640102.1
ENST00000640747.1
ENST00000682191.1
ENST00000682192.1
ENST00000682232.1
ENST00000682326.1
ENST00000682404.1
ENST00000682517.1
ENST00000682652.1
ENST00000682665.1
ENST00000682691.1
ENST00000682791.1
ENST00000682811.1
ENST00000682946.1
ENST00000683143.1
ENST00000683373.1
ENST00000683558.1
ENST00000683955.1
ENST00000684142.1
ENST00000684252.1
ENST00000684255.1
ENST00000684315.1
ENST00000684345.1
ENST00000684499.1
ENST00000684682.1
CDS GCA 90 bp GAGAACTGGCAGCGGGCTTGGGTGCGAGCGCTGAACGAGCAGGCCTaGAGAAACGGGGTGAGTTGGACCAAGCGCTTGGGTGGTCCCTTC +
Preference number: 5 (lower is better)
Translates to: ENWQRAWVRALNEQA*RNGVSWTKRLGGPF
Trigger: GAAGGGACCACCCAAGCGCTTGGTCCAACTCACCCCGTTTCTGCAGGCCTGCTCGTTCAGCGCTCGCACCCAAGCCCGCTGCCAGTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS CCA 90 bp GGCCTCCTGGCGTCACTCTTCGCCTTCAAGTCTTTCCGGGAGAACTaGCAGCGGGCTTGGGTGCGAGCGCTGAACGAGCAGGCCTGCAGA +
Preference number: 5 (lower is better)
Translates to: GLLASLFAFKSFREN*QRAWVRALNEQACR
Trigger: TCTGCAGGCCTGCTCGTTCAGCGCTCGCACCCAAGCCCGCTGCCAGTTCTCCCGGAAAGACTTGAAGGCGAAGAGTGACGCCAGGAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS TCA 90 bp CCCTGGGATTCTGGGATCTGCTGTCGGCTGGTTTTGTTGAGGTCCTaGCCACAGAGGCGCGCAGCAATGAAGTGGCCCCGGAAGGCCGGG +
Preference number: 5 (lower is better)
Translates to: PWDSGICCRLVLLRS*PQRRAAMKWPRKAG
Trigger: CCCGGCCTTCCGGGGCCACTTCATTGCTGCGCGCCTCTGTGGTCAGGACCTCAACAAAACCAGCCGACAGCAGATCCCAGAATCCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 20 transcripts:
ENST00000354202.9
ENST00000409993.6
ENST00000414373.5
ENST00000445653.6
ENST00000472016.1
ENST00000639704.1
ENST00000640747.1
ENST00000682191.1
ENST00000682192.1
ENST00000682326.1
ENST00000682665.1
ENST00000682691.1
ENST00000682811.1
ENST00000682946.1
ENST00000683373.1
ENST00000683558.1
ENST00000683955.1
ENST00000684142.1
ENST00000684252.1
ENST00000684345.1
CDS TCA 90 bp TGTGCCGCTGCTCACATCTGCTGTCGGCTGGTTTTGTTGAGGTCCTaGCCACAGAGGCGCGCAGCAATGAAGTGGCCCCGGAAGGCCGGG +
Preference number: 5 (lower is better)
Translates to: CAAAHICCRLVLLRS*PQRRAAMKWPRKAG
Trigger: CCCGGCCTTCCGGGGCCACTTCATTGCTGCGCGCCTCTGTGGTCAGGACCTCAACAAAACCAGCCGACAGCAGATGTGAGCAGCGGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000460183.1
ENST00000481084.5
ENST00000530052.2
ENST00000682404.1
ENST00000682517.1
ENST00000682652.1
ENST00000684315.1
CDS TCA 90 bp TGGCAAGGAGGGCACATCTGCTGTCGGCTGGTTTTGTTGAGGTCCTaGCCACAGAGGCGCGCAGCAATGAAGTGGCCCCGGAAGGCCGGG +
Preference number: 5 (lower is better)
Translates to: WQGGHICCRLVLLRS*PQRRAAMKWPRKAG
Trigger: CCCGGCCTTCCGGGGCCACTTCATTGCTGCGCGCCTCTGTGGTCAGGACCTCAACAAAACCAGCCGACAGCAGATGTGCCCTCCTTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640102.1
CDS GCA 90 bp CCTAGCCACTCCTTCCTTAGCCCTTGCCCCCTGCCCGGACCCGTGTaGCGCTGCTCACATCTGCTGTCGGCTGGTTTTGTTGAGGTCCTG +
Preference number: 5 (lower is better)
Translates to: PSHSFLSPCPLPGPV*RCSHLLSAGFVEVL
Trigger: CAGGACCTCAACAAAACCAGCCGACAGCAGATGTGAGCAGCGGCACACGGGTCCGGGCAGGGGGCAAGGGCTAAGGAAGGAGTGGCTAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000460183.1
ENST00000481084.5
ENST00000530052.2
ENST00000682404.1
ENST00000682517.1
ENST00000682652.1
ENST00000683567.1
ENST00000684315.1
CDS CCA 90 bp TGGGTGCGAGCGCTGAACGAGCAGGCCTGCAGAAACGGGGTGAGTTaGACCAAGCGCTTGGGTGGTCCCTTCAGCCTTTCCTTCCAGGGG +
Preference number: 5 (lower is better)
Translates to: WVRALNEQACRNGVS*TKRLGGPFSLSFQG
Trigger: CCCCTGGAAGGAAAGGCTGAAGGGACCACCCAAGCGCTTGGTCCAACTCACCCCGTTTCTGCAGGCCTGCTCGTTCAGCGCTCGCACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR CAA 90 bp GTCCAGATGCAGGCCAAGTATCGGGCGGAAGGGCTTGGGCACCACAATGGTCGTCCCAGCAACTCTGACTaGAGCCGCCGTCGGGACACC +
Preference number: 5 (lower is better)
Translates to: VQMQAKYRAEGLGHHNGRPSNSD*SRRRDT
Trigger: GGTGTCCCGACGGCGGCTCAAGTCAGAGTTGCTGGG...ACGACCATTGTGGTGCCCAAGCCCTTCCGCCCGATACTTGGCCTGCATCTGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
CDS GCA 90 bp CACTCCTTCCTTAGCCCTTGCCCCCTGCCCGGACCCGTGTGCCGCTaGTCACATCTGCTGTCGGCTGGTTTTGTTGAGGTCCTGACCACA +
Preference number: 5 (lower is better)
Translates to: HSFLSPCPLPGPVCR*SHLLSAGFVEVLTT
Trigger: TGTGGTCAGGACCTCAACAAAACCAGCCGACAGCAGATGTGAGCAGCGGCACACGGGTCCGGGCAGGGGGCAAGGGCTAAGGAAGGAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000460183.1
ENST00000481084.5
ENST00000530052.2
ENST00000682404.1
ENST00000682517.1
ENST00000682652.1
ENST00000684315.1
CDS GCA 90 bp CCGCCGTCGGGACACCGGGGAACCTCTCTAAGGCAACCTATGTTCTaGCCCGCTGCACCCGCCTATCTACTGTTTCCGCCCGGATCTTGT +
Preference number: 5 (lower is better)
Translates to: PPSGHRGTSLRQPMF*PAAPAYLLFPPGSC
Trigger: ACAAGATCCGGGCGGAAACAGTAGATAGGCGGGTGCAGCGGGGCAGAACATAGGTTGCCTTAGAGAGGTTCCCCGGTGTCCCGACGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481084.5
ENST00000682652.1
CDS CCA 90 bp TCTCCGAGTTCCAGGCTGCCTGGGTTAGTTCTGAGTCTTCACGTGTaGTCAAGCACCCCGGTTCCCGCCCCTGCCCTAGCCACTCCTTCC +
Preference number: 5 (lower is better)
Translates to: SPSSRLPGLVLSLHV*SSTPVPAPALATPS
Trigger: GGAAGGAGTGGCTAGGGCAGGGGCGGGAACCGGGGTGCTTGACCACACGTGAAGACTCAGAACTAACCCAGGCAGCCTGGAACTCGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000460183.1
ENST00000481084.5
ENST00000530052.2
ENST00000682404.1
ENST00000682517.1
ENST00000682652.1
ENST00000683567.1
ENST00000684315.1
CDS TCA 90 bp GTCCATGACTCAAGCATCTGCTGTCGGCTGGTTTTGTTGAGGTCCTaGCCACAGAGGCGCGCAGCAATGAAGTGGCCCCGGAAGGCCGGG +
Preference number: 5 (lower is better)
Translates to: VHDSSICCRLVLLRS*PQRRAAMKWPRKAG
Trigger: CCCGGCCTTCCGGGGCCACTTCATTGCTGCGCGCCTCTGTGGTCAGGACCTCAACAAAACCAGCCGACAGCAGATGCTTGAGTCATGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682791.1
CDS TCA 90 bp TGCCTTACACTGCTCATCTGCTGTCGGCTGGTTTTGTTGAGGTCCTaGCCACAGAGGCGCGCAGCAATGAAGTGGCCCCGGAAGGCCGGG +
Preference number: 5 (lower is better)
Translates to: CLTLLICCRLVLLRS*PQRRAAMKWPRKAG
Trigger: CCCGGCCTTCCGGGGCCACTTCATTGCTGCGCGCCTCTGTGGTCAGGACCTCAACAAAACCAGCCGACAGCAGATGAGCAGTGTAAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683143.1
CDS CCA 90 bp TCACTCTTCGCCTTCAAGTCTTTCCGGGAGAACTGGCAGCGGGCTTaGGTGCGAGCGCTGAACGAGCAGGCCTGCAGAAACGGGGTGAGT +
Preference number: 5 (lower is better)
Translates to: SLFAFKSFRENWQRA*VRALNEQACRNGVS
Trigger: ACTCACCCCGTTTCTGCAGGCCTGCTCGTTCAGCGCTCGCACCCAAGCCCGCTGCCAGTTCTCCCGGAAAGACTTGAAGGCGAAGAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR CAA 90 bp CAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCACAGAGCAATATGCCCGGGGCTaGTGGCTGGCGCGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: QSVVSRGQETPRMPMITEQYARG*WLARAR
Trigger: GCGGGCCCGCGCCAGCCACAAGCCCCGGGCATATTG...CTCTGTGATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS CCA 90 bp ATCATGCAGCAGATGGCAAGGAGGGCACCTATCAGGGCCACAAACTaGGGGAGGCTCGGGCAGGTCCATGACTCAAGCCTGCTCCCATTC +
Preference number: 5 (lower is better)
Translates to: IMQQMARRAPIRATN*GRLGQVHDSSLLPF
Trigger: GAATGGGAGCAGGCTTGAGTCATGGACCTGCCCGAGCCTCCCCCAGTTTGTGGCCCTGATAGGTGCCCTCCTTGCCATCTGCTGCATGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000525456.5
ENST00000530052.2
ENST00000533687.1
ENST00000682404.1
ENST00000682517.1
ENST00000682652.1
ENST00000682665.1
ENST00000682691.1
ENST00000682883.1
ENST00000683955.1
ENST00000684252.1
ENST00000684315.1
ENST00000684499.1
CDS CCA 90 bp ATCATGCAGCAGATGGCAAGGAGGGCACCTATCAGGGCCACAAACTaGGGGAGGCTCGGGCAGGTCCATGACTCAAGCATCTGCTGTCGG +
Preference number: 5 (lower is better)
Translates to: IMQQMARRAPIRATN*GRLGQVHDSSICCR
Trigger: CCGACAGCAGATGCTTGAGTCATGGACCTGCCCGAGCCTCCCCCAGTTTGTGGCCCTGATAGGTGCCCTCCTTGCCATCTGCTGCATGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682791.1
CDS TCA 90 bp CAGGCAGGCTCTTCCCACACCAATCTGAGCAAAACCCAGCAACTCTaGCTTGAGCCGCCGTCGGGACACCGGGGAACCTCTCTAAGGCAA +
Preference number: 5 (lower is better)
Translates to: QAGSSHTNLSKTQQL*LEPPSGHRGTSLRQ
Trigger: TTGCCTTAGAGAGGTTCCCCGGTGTCCCGACGGCGGCTCAAGTCAGAGTTGCTGGGTTTTGCTCAGATTGGTGTGGGAAGAGCCTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 27 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000414373.5
ENST00000460183.1
ENST00000472016.1
ENST00000481084.5
ENST00000530052.2
ENST00000640747.1
ENST00000682191.1
ENST00000682192.1
ENST00000682232.1
ENST00000682326.1
ENST00000682404.1
ENST00000682517.1
ENST00000682652.1
ENST00000682665.1
ENST00000682691.1
ENST00000683373.1
ENST00000683558.1
ENST00000683955.1
ENST00000684142.1
ENST00000684252.1
ENST00000684255.1
ENST00000684315.1
ENST00000684345.1
ENST00000684499.1
ENST00000684682.1
CDS TCA 90 bp CATAGTACAGGATTCATCTGCTGTCGGCTGGTTTTGTTGAGGTCCTaGCCACAGAGGCGCGCAGCAATGAAGTGGCCCCGGAAGGCCGGG +
Preference number: 5 (lower is better)
Translates to: HSTGFICCRLVLLRS*PQRRAAMKWPRKAG
Trigger: CCCGGCCTTCCGGGGCCACTTCATTGCTGCGCGCCTCTGTGGTCAGGACCTCAACAAAACCAGCCGACAGCAGATGAATCCTGTACTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684682.1
CDS GCA 90 bp GGGACACCGGGGAACCTCTCTAAGGCAACCTATGTTCTGCCCCGCTaGACCCGCCTATCTACTGTTTCCGCCCGGATCTTGTTCGCTGAA +
Preference number: 5 (lower is better)
Translates to: GTPGNLSKATYVLPR*TRLSTVSARILFAE
Trigger: TTCAGCGAACAAGATCCGGGCGGAAACAGTAGATAGGCGGGTGCAGCGGGGCAGAACATAGGTTGCCTTAGAGAGGTTCCCCGGTGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481084.5
ENST00000682652.1
CDS-3UTR CAA 90 bp GCTGTATCCCACCCTATGAGGCTGCAAAGATGGGATGGAGAGGGAGAGAGTAGCCAGAAACGGGGTGAGTaGGACCAAGCGCTTGGGTGG +
Preference number: 5 (lower is better)
Translates to: AVSHPMRLQRWDGEGESSQKRGE*DQALGW
Trigger: CCACCCAAGCGCTTGGTCCAACTCACCCCGTTTCTG...GCTACTCTCTCCCTCTCCATCCCATCTTTGCAGCCTCATAGGGTGGGATACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR CAA 90 bp GTTCCTAGCCCTGGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCGAACTGGCAGCGGGCTaGGGTGCGAGCGCTGAACGA +
Preference number: 5 (lower is better)
Translates to: VPSPGPSSIPKTSGSLRVELAAG*GASAER
Trigger: TCGTTCAGCGCTCGCACCCAAGCCCGCTGCCAGTTC...GACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCCAGGGCTAGGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS TCA 90 bp AGGCTCTTCCCACACCAATCTGAGCAAAACCCAGCAACTCTGACTTaGGCCGCCGTCGGGACACCGGGGAACCTCTCTAAGGCAACCTAT +
Preference number: 5 (lower is better)
Translates to: RLFPHQSEQNPATLT*AAVGTPGNLSKATY
Trigger: ATAGGTTGCCTTAGAGAGGTTCCCCGGTGTCCCGACGGCGGCTCAAGTCAGAGTTGCTGGGTTTTGCTCAGATTGGTGTGGGAAGAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 27 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000414373.5
ENST00000460183.1
ENST00000472016.1
ENST00000481084.5
ENST00000530052.2
ENST00000640747.1
ENST00000682191.1
ENST00000682192.1
ENST00000682232.1
ENST00000682326.1
ENST00000682404.1
ENST00000682517.1
ENST00000682652.1
ENST00000682665.1
ENST00000682691.1
ENST00000683373.1
ENST00000683558.1
ENST00000683955.1
ENST00000684142.1
ENST00000684252.1
ENST00000684255.1
ENST00000684315.1
ENST00000684345.1
ENST00000684499.1
ENST00000684682.1
CDS-3UTR CAA 90 bp GTTCCTAGCCCTGGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCATCGGGCGGAAGGGCTaGGGCACCACAATGGTCGTG +
Preference number: 5 (lower is better)
Translates to: VPSPGPSSIPKTSGSLRVIGRKG*GTTMVV
Trigger: CACGACCATTGTGGTGCCCAAGCCCTTCCGCCCGAT...GACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCCAGGGCTAGGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CAA 90 bp GTCCAGATGCAGGCCAAGTATCGGGCGGAAGGGCTTGGGCACCACAATGGTCGTTTGCCTGTCTTGATATaGAGTCTGGGTATGCGGTGG +
Preference number: 5 (lower is better)
Translates to: VQMQAKYRAEGLGHHNGRLPVLI*SLGMRW
Trigger: CCACCGCATACCCAGACTCAATATCAAGACAGGCAA...ACGACCATTGTGGTGCCCAAGCCCTTCCGCCCGATACTTGGCCTGCATCTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000640102.1
ENST00000640747.1
CDS TCA 90 bp CCCACACCAATCCAGAGCGGAAATGCCAATTGCCCGGTTCCAAGATaGATGCCTCCTTGTACCACGTGTCTGACACCGCTCACATTCCGG +
Preference number: 5 (lower is better)
Translates to: PTPIQSGNANCPVPR*MPPCTTCLTPLTFR
Trigger: CCGGAATGTGAGCGGTGTCAGACACGTGGTACAAGGAGGCATTCATCTTGGAACCGGGCAATTGGCATTTCCGCTCTGGATTGGTGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS TCA 90 bp GGTCATGCCAGCAAAGTAACAGAAGGTATCTCCCACAAACACCCGTaGTGGGTACCTGTGTGGGGGAAGAGGATCCGAGCCAGTGGCAAG +
Preference number: 5 (lower is better)
Translates to: GHASKVTEGISHKHP*WVPVWGKRIRASGK
Trigger: CTTGCCACTGGCTCGGATCCTCTTCCCCCACACAGGTACCCATCACGGGTGTTTGTGGGAGATACCTTCTGTTACTTTGCTGGCATGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000461999.1
ENST00000682404.1
ENST00000682517.1
ENST00000683955.1
CDS TCA 90 bp GGCACCTATCAGGGCCACAAACTGGGGGAGGCTCGGGCAGGTCCATaGCTCAAGCCTGCTCCCATTCCACCTTTTAAGAATTCCTGTCTT +
Preference number: 5 (lower is better)
Translates to: GTYQGHKLGEARAGP*LKPAPIPPFKNSCL
Trigger: AAGACAGGAATTCTTAAAAGGTGGAATGGGAGCAGGCTTGAGTCATGGACCTGCCCGAGCCTCCCCCAGTTTGTGGCCCTGATAGGTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000525456.5
ENST00000530052.2
ENST00000533687.1
ENST00000682404.1
ENST00000682517.1
ENST00000682652.1
ENST00000682665.1
ENST00000682691.1
ENST00000682883.1
ENST00000683955.1
ENST00000684252.1
ENST00000684315.1
ENST00000684499.1
CDS GCA 90 bp GCCAGCGCAGATTCAGTACATCATCCGCAAAGCCCAGGAAGATCATaGAGCAGATGGCAAGGAGGGCACCTATCAGGGCCACAAACTCTC +
Preference number: 5 (lower is better)
Translates to: ASADSVHHPQSPGRS*SRWQGGHLSGPQTL
Trigger: GAGAGTTTGTGGCCCTGATAGGTGCCCTCCTTGCCATCTGCTGCATGATCTTCCTGGGCTTTGCGGATGATGTACTGAATCTGCGCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442480.1
CDS GCA 90 bp GCCAGCGCAGATTCAGTACATCATCCGCAAAGCCCAGGAAGATCATaGAGCAGATGGCAAGGAGGGCACTTCATGGTGGGGGAATGCCTT +
Preference number: 5 (lower is better)
Translates to: ASADSVHHPQSPGRS*SRWQGGHFMVGECL
Trigger: AAGGCATTCCCCCACCATGAAGTGCCCTCCTTGCCATCTGCTGCATGATCTTCCTGGGCTTTGCGGATGATGTACTGAATCTGCGCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000640747.1
ENST00000684142.1
ENST00000684345.1
CDS GCA 90 bp GCCAGCGCAGATTCAGTACATCATCCGCAAAGCCCAGGAAGATCATaGAGCAGATGGCAAGGAGGGCACATCTGCTGTCGGCTGGTTTTG +
Preference number: 5 (lower is better)
Translates to: ASADSVHHPQSPGRS*SRWQGGHICCRLVL
Trigger: CAAAACCAGCCGACAGCAGATGTGCCCTCCTTGCCATCTGCTGCATGATCTTCCTGGGCTTTGCGGATGATGTACTGAATCTGCGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640102.1
CDS CCA 90 bp ATGCGAGTAAGTTCTGCTCATCACCTCTCCGAGTTCCAGGCTGCCTaGGTTAGTTCTGAGTCTTCACGTGTGGTCAAGCACCCCGGTTCC +
Preference number: 5 (lower is better)
Translates to: MRVSSAHHLSEFQAA*VSSESSRVVKHPGS
Trigger: GGAACCGGGGTGCTTGACCACACGTGAAGACTCAGAACTAACCCAGGCAGCCTGGAACTCGGAGAGGTGATGAGCAGAACTTACTCGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000460183.1
ENST00000481084.5
ENST00000530052.2
ENST00000682404.1
ENST00000682517.1
ENST00000682652.1
ENST00000682883.1
ENST00000683567.1
ENST00000684315.1
CDS CCA 90 bp ACACCCGTGATGGGTACCTGTGTGGGGGAAGAGGATCCGAGCCAGTaGCAAGAGGCATTACCAATCCCTTCTCTCACATCACACCCTATG +
Preference number: 5 (lower is better)
Translates to: TPVMGTCVGEEDPSQ*QEALPIPSLTSHPM
Trigger: CATAGGGTGTGATGTGAGAGAAGGGATTGGTAATGCCTCTTGCCACTGGCTCGGATCCTCTTCCCCCACACAGGTACCCATCACGGGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000461999.1
ENST00000682404.1
ENST00000682517.1
ENST00000683955.1
CDS CCA 90 bp AGGTCCCAGCCACAGGCAATCACCCCCACGAACCCACTTACTTCATaGTGGGGGAATGCCTTACACTGCTCCTTCACAAAGCAGTTCAGG +
Preference number: 5 (lower is better)
Translates to: RSQPQAITPTNPLTS*WGNALHCSFTKQFR
Trigger: CCTGAACTGCTTTGTGAAGGAGCAGTGTAAGGCATTCCCCCACCATGAAGTAAGTGGGTTCGTGGGGGTGATTGCCTGTGGCTGGGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000472016.1
ENST00000525456.5
ENST00000530052.2
ENST00000682404.1
ENST00000682517.1
ENST00000682652.1
ENST00000682665.1
ENST00000682691.1
ENST00000682883.1
ENST00000683955.1
ENST00000684252.1
ENST00000684315.1
ENST00000684499.1
CDS-3UTR CAA 90 bp AAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCCCCAGCAACTCTGACTaGAGCCGCCGTCGGGACACC +
Preference number: 5 (lower is better)
Translates to: KIQSVVSRGQETPRMPMIPSNSD*SRRRDT
Trigger: GGTGTCCCGACGGCGGCTCAAGTCAGAGTTGCTGGG...GATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CAA 90 bp GCTGTATCCCACCCTATGAGGCTGCAAAGATGGGATGGAGAGGGAGAGAGTAGCAGCGAGACGATCAAATaGATCAGCAGCGGCATGGGC +
Preference number: 5 (lower is better)
Translates to: AVSHPMRLQRWDGEGESSSETIK*ISSGMG
Trigger: GCCCATGCCGCTGCTGATCAATTTGATCGTCTCGCT...GCTACTCTCTCCCTCTCCATCCCATCTTTGCAGCCTCATAGGGTGGGATACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CAA 90 bp AGCTGGAGGCTCTCTGCCACCTTTAAAATAAAGGTGCCCAAGAAAGAGAGGCTCATCGGGCGGAAGGGCTaGGGCACCACAATGGTCGTG +
Preference number: 5 (lower is better)
Translates to: SWRLSATFKIKVPKKERLIGRKG*GTTMVV
Trigger: CACGACCATTGTGGTGCCCAAGCCCTTCCGCCCGAT...GAGCCTCTCTTTCTTGGGCACCTTTATTTTAAAGGTGGCAGAGAGCCTCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000442480.1
ENST00000640102.1
ENST00000640747.1
CDS TCA 90 bp CCAATTGCCCGGTTCCAAGATGAATGCCTCCTTGTACCACGTGTCTaGCACCGCTCACATTCCGGTTCCACGTCAGTTTTAGCTCCGTCC +
Preference number: 5 (lower is better)
Translates to: PIARFQDECLLVPRV*HRSHSGSTSVLAPS
Trigger: GGACGGAGCTAAAACTGACGTGGAACCGGAATGTGAGCGGTGTCAGACACGTGGTACAAGGAGGCATTCATCTTGGAACCGGGCAATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS TCA 90 bp AAAGGAACACTTGGAGGAGAATGTGGAGCACCAGGAAGGGTTCCCTaGAGTAGGTGCCATAGGGGCAGCAGTGGTAGGACTACCTACCCA +
Preference number: 5 (lower is better)
Translates to: KGTLGGECGAPGRVP*SRCHRGSSGRTTYP
Trigger: TGGGTAGGTAGTCCTACCACTGCTGCCCCTATGGCACCTACTTCAGGGAACCCTTCCTGGTGCTCCACATTCTCCTCCAAGTGTTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533687.1
CDS GCA 90 bp GCCAGCGCAGATTCAGTACATCATCCGCAAAGCCCAGGAAGATCATaGAGCAGATGGCAAGGAGGGCACCTATCAGGGCCACAAAATCTG +
Preference number: 5 (lower is better)
Translates to: ASADSVHHPQSPGRS*SRWQGGHLSGPQNL
Trigger: CAGATTTTGTGGCCCTGATAGGTGCCCTCCTTGCCATCTGCTGCATGATCTTCCTGGGCTTTGCGGATGATGTACTGAATCTGCGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000682232.1
ENST00000684255.1
CDS GCA 90 bp ATCTTCAGTCTCACTCTGGTGTACTGTCACCAGCTGGAGGCTCTCTaGCACCTGGAGGGACCAGAGGTGAAGAGAACCTCAGCTAATACC +
Preference number: 5 (lower is better)
Translates to: IFSLTLVYCHQLEAL*HLEGPEVKRTSANT
Trigger: GGTATTAGCTGAGGTTCTCTTCACCTCTGGTCCCTCCAGGTGGCAGAGAGCCTCCAGCTGGTGACAGTACACCAGAGTGAGACTGAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000445653.6
ENST00000461999.1
ENST00000524658.2
ENST00000530052.2
ENST00000682192.1
ENST00000682404.1
ENST00000682517.1
ENST00000682665.1
ENST00000682691.1
ENST00000683558.1
ENST00000684142.1
ENST00000684252.1
ENST00000684255.1
ENST00000684345.1
ENST00000684499.1
ENST00000684682.1
CDS GCA 90 bp GCAGATGGCAAGGAGGGCACTTCATGGTGGGGGAATGCCTTACACTaGTCCTTCACAAAGCAGTTCAGGAAGGGGAAAGGGATGAAGCAG +
Preference number: 5 (lower is better)
Translates to: ADGKEGTSWWGNALH*SFTKQFRKGKGMKQ
Trigger: CTGCTTCATCCCTTTCCCCTTCCTGAACTGCTTTGTGAAGGAGCAGTGTAAGGCATTCCCCCACCATGAAGTGCCCTCCTTGCCATCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000640747.1
ENST00000684142.1
ENST00000684345.1
CDS CCA 90 bp TCCCAGCCACAGGCAATCACCCCCACGAACCCACTTACTTCATGGTaGGGGAATGCCTTACACTGCTCCTTCACAAAGCAGTTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: SQPQAITPTNPLTSW*GNALHCSFTKQFRK
Trigger: CTTCCTGAACTGCTTTGTGAAGGAGCAGTGTAAGGCATTCCCCCACCATGAAGTAAGTGGGTTCGTGGGGGTGATTGCCTGTGGCTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000472016.1
ENST00000525456.5
ENST00000530052.2
ENST00000682404.1
ENST00000682517.1
ENST00000682652.1
ENST00000682665.1
ENST00000682691.1
ENST00000682883.1
ENST00000683955.1
ENST00000684252.1
ENST00000684315.1
ENST00000684499.1
CDS-3UTR CAA 90 bp AGGAAGTTGAACACCTGGGGCATGAAGAATAGTAGCATGGTCTTGCTGAAGTGTCCCAGCAACTCTGACTaGAGCCGCCGTCGGGACACC +
Preference number: 5 (lower is better)
Translates to: RKLNTWGMKNSSMVLLKCPSNSD*SRRRDT
Trigger: GGTGTCCCGACGGCGGCTCAAGTCAGAGTTGCTGGG...ACACTTCAGCAAGACCATGCTACTATTCTTCATGCCCCAGGTGTTCAACTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000640102.1
ENST00000640747.1
CDS-3UTR CAA 90 bp ATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATCGGGCGGAAGGGCTaGGGCACCACAATGGTCGTG +
Preference number: 5 (lower is better)
Translates to: IGKIQSVVSRGQETPRMPIGRKG*GTTMVV
Trigger: CACGACCATTGTGGTGCCCAAGCCCTTCCGCCCGAT...TGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTTACCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS GCA 90 bp GCCAGCGCAGATTCAGTACATCATCCGCAAAGCCCAGGAAGATCATaGAGCAGATGGCAAGGAGGGCACCTATCAGGGCCACAAATTCAT +
Preference number: 5 (lower is better)
Translates to: ASADSVHHPQSPGRS*SRWQGGHLSGPQIH
Trigger: ATGAATTTGTGGCCCTGATAGGTGCCCTCCTTGCCATCTGCTGCATGATCTTCCTGGGCTTTGCGGATGATGTACTGAATCTGCGCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000354202.9
ENST00000409993.6
ENST00000445653.6
ENST00000460183.1
ENST00000682191.1
ENST00000682192.1
ENST00000682326.1
ENST00000682811.1
ENST00000682946.1
ENST00000683143.1
ENST00000683373.1
ENST00000683558.1
ENST00000683567.1
CDS CCA 90 bp GTGCAGCAACTCTGCAGGATCCAAGGCCCTGAATTCATCTATTCCTaGGGCCTCCACGCACTCATCCCTAACTACTACTGGGTAGAGAGA +
Preference number: 5 (lower is better)
Translates to: VQQLCRIQGPEFIYS*GLHALIPNYYWVER
Trigger: TCTCTCTACCCAGTAGTAGTTAGGGATGAGTGCGTGGAGGCCCCAGGAATAGATGAATTCAGGGCCTTGGATCCTGCAGAGTTGCTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000461999.1
ENST00000533687.1
ENST00000682404.1
ENST00000682517.1
ENST00000683955.1
CDS-3UTR CAA 90 bp GAAGAGTCGAACGAGCTGATATCGAATGGAGAAGGTGATGGCACTGCCCAGGATAGCGAGACGATCAAATaGATCAGCAGCGGCATGGGC +
Preference number: 5 (lower is better)
Translates to: EESNELISNGEGDGTAQDSETIK*ISSGMG
Trigger: GCCCATGCCGCTGCTGATCAATTTGATCGTCTCGCT...ATCCTGGGCAGTGCCATCACCTTCTCCATTCGATATCAGCTCGTTCGACTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640747.1
CDS-3UTR CAA 90 bp GTACAGGATTCCCAAGTCCAGATGCAGGCCAAGTATCGGGCGGAAGGGCTTGGGAATAGTAGCATGGTCTaGCTGAAGTGTCCCAAGATG +
Preference number: 5 (lower is better)
Translates to: VQDSQVQMQAKYRAEGLGNSSMV*LKCPKM
Trigger: CATCTTGGGACACTTCAGCAAGACCATGCTACTATT...CCCAAGCCCTTCCGCCCGATACTTGGCCTGCATCTGGACTTGGGAATCCTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000640102.1
ENST00000640747.1
CDS-3UTR CAA 90 bp GCTGTATCCCACCCTATGAGGCTGCAAAGATGGGATGGAGAGGGAGAGAGTAGCTTGCCTGTCTTGATATaGAGTCTGGGTATGCGGTGG +
Preference number: 5 (lower is better)
Translates to: AVSHPMRLQRWDGEGESSLPVLI*SLGMRW
Trigger: CCACCGCATACCCAGACTCAATATCAAGACAGGCAA...GCTACTCTCTCCCTCTCCATCCCATCTTTGCAGCCTCATAGGGTGGGATACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS GCA 90 bp GCACCTATCAGGGCCACAAATTCATGGTGGGGGAATGCCTTACACTaGTCCTTCACAAAGCAGTTCAGGAAGGGGAAAGGGATGAAGCAG +
Preference number: 5 (lower is better)
Translates to: APIRATNSWWGNALH*SFTKQFRKGKGMKQ
Trigger: CTGCTTCATCCCTTTCCCCTTCCTGAACTGCTTTGTGAAGGAGCAGTGTAAGGCATTCCCCCACCATGAATTTGTGGCCCTGATAGGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354202.9
ENST00000409993.6
ENST00000445653.6
ENST00000460183.1
ENST00000682191.1
ENST00000682192.1
ENST00000682326.1
ENST00000682811.1
ENST00000682946.1
ENST00000683373.1
ENST00000683558.1
ENST00000683567.1
CDS GCA 90 bp GGACTAGCCCTGACCCTAGTTCTGACTCAGAGGAGACTCCAGTTGTaGAGCAACTCTGCAGGATCCAAGGCCCTGAATTCATCTATTCCT +
Preference number: 5 (lower is better)
Translates to: GLALTLVLTQRRLQL*SNSAGSKALNSSIP
Trigger: AGGAATAGATGAATTCAGGGCCTTGGATCCTGCAGAGTTGCTGCACAACTGGAGTCTCCTCTGAGTCAGAACTAGGGTCAGGGCTAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000461999.1
ENST00000533687.1
ENST00000682404.1
ENST00000682517.1
ENST00000683955.1
CDS GCA 90 bp CAGAAAGGGAGACACGGAGGTATAAACTCGATTCCCATCCTCACCTaGAGCAGCAGCAGGAGCAATGTGAGGTTTCTCTCATGTATGGGC +
Preference number: 5 (lower is better)
Translates to: QKGRHGGINSIPILT*SSSRSNVRFLSCMG
Trigger: GCCCATACATGAGAGAAACCTCACATTGCTCCTGCTGCTGCTGCAGGTGAGGATGGGAATCGAGTTTATACCTCCGTGTCTCCCTTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000461999.1
ENST00000524658.2
ENST00000530052.2
ENST00000682191.1
ENST00000682192.1
ENST00000682404.1
ENST00000682652.1
ENST00000682665.1
ENST00000682883.1
ENST00000683558.1
ENST00000684252.1
ENST00000684315.1
ENST00000684682.1
CDS CCA 90 bp AGAGGCATTACCAATCCCTTCTCTCACATCACACCCTATGGGCACTaGACTAGCCCTGACCCTAGTTCTGACTCAGAGGAGACTCCAGTT +
Preference number: 5 (lower is better)
Translates to: RGITNPFSHITPYGH*TSPDPSSDSEETPV
Trigger: AACTGGAGTCTCCTCTGAGTCAGAACTAGGGTCAGGGCTAGTCCAGTGCCCATAGGGTGTGATGTGAGAGAAGGGATTGGTAATGCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000461999.1
ENST00000533687.1
ENST00000682404.1
ENST00000682517.1
ENST00000683955.1
CDS-3UTR CAA 90 bp ATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCACAGAGAAAGCGAGACGATCAAATaGATCAGCAGCGGCATGGGC +
Preference number: 5 (lower is better)
Translates to: ISSQQRARNAQDANDHRESETIK*ISSGMG
Trigger: GCCCATGCCGCTGCTGATCAATTTGATCGTCTCGCT...TTCTCTGTGATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CAA 90 bp GAAAAAGACAACACTTTATTGTCTCCATTGAGAGCATGTGGCCCCCTGCTTAGTATCGGGCGGAAGGGCTaGGGCACCACAATGGTCGTG +
Preference number: 5 (lower is better)
Translates to: EKDNTLLSPLRACGPLLSIGRKG*GTTMVV
Trigger: CACGACCATTGTGGTGCCCAAGCCCTTCCGCCCGAT...ACTAAGCAGGGGGCCACATGCTCTCAATGGAGACAATAAAGTGTTGTCTTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
CDS-3UTR CAA 90 bp AGCAAGTTGCAGAAAGCCATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAATCGGGCGGAAGGGCTaGGGCACCACAATGGTCGTG +
Preference number: 5 (lower is better)
Translates to: SKLQKAIGKIQSVVSRGQIGRKG*GTTMVV
Trigger: CACGACCATTGTGGTGCCCAAGCCCTTCCGCCCGAT...TTGCCCTCTGCTGACTACTGATTGGATTTTACCTATGGCTTTCTGCAACTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CAA 90 bp GCTGTATCCCACCCTATGAGGCTGCAAAGATGGGATGGAGAGGGAGAGAGTAGCAGGATATTGATGGCATaGGTACAGAACACTGCCAGC +
Preference number: 5 (lower is better)
Translates to: AVSHPMRLQRWDGEGESSRILMA*VQNTAS
Trigger: GCTGGCAGTGTTCTGTACCAATGCCATCAATATCCT...GCTACTCTCTCCCTCTCCATCCCATCTTTGCAGCCTCATAGGGTGGGATACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CAA 90 bp GAGCTGATATCGAATGGAGAAGGTGATGGCACTGCCCAGGATCTGCAGCAGCAGAGGATATTGATGGCATaGGTACAGAACACTGCCAGC +
Preference number: 5 (lower is better)
Translates to: ELISNGEGDGTAQDLQQQRILMA*VQNTAS
Trigger: GCTGGCAGTGTTCTGTACCAATGCCATCAATATCCT...CTGCTGCTGCAGATCCTGGGCAGTGCCATCACCTTCTCCATTCGATATCAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000442480.1
ENST00000638850.1
ENST00000640747.1
CDS-3UTR CAA 90 bp GACATAGTACAGGATTCCCAAGTCCAGATGCAGGCCAAGTATCGGGCGGAAGGGAGGATATTGATGGCATaGGTACAGAACACTGCCAGC +
Preference number: 5 (lower is better)
Translates to: DIVQDSQVQMQAKYRAEGRILMA*VQNTAS
Trigger: GCTGGCAGTGTTCTGTACCAATGCCATCAATATCCT...CCCTTCCGCCCGATACTTGGCCTGCATCTGGACTTGGGAATCCTGTACTATGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
CDS-3UTR CAA 90 bp GAGTCGAACGAGCTGATATCGAATGGAGAAGGTGATGGCACTGCCCAGGATCTGTTGCCTGTCTTGATATaGAGTCTGGGTATGCGGTGG +
Preference number: 5 (lower is better)
Translates to: ESNELISNGEGDGTAQDLLPVLI*SLGMRW
Trigger: CCACCGCATACCCAGACTCAATATCAAGACAGGCAA...CAGATCCTGGGCAGTGCCATCACCTTCTCCATTCGATATCAGCTCGTTCGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000442480.1
ENST00000638850.1
ENST00000640747.1
CDS-3UTR CAA 90 bp CTAATCAGAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTGTGGGCTGGGCGGCCTaGCTGATCCTCTTCGCCGCC +
Preference number: 5 (lower is better)
Translates to: LIRTLNLQSNDMSPWSLCVGWAA*LILFAA
Trigger: GGCGGCGAAGAGGATCAGCAAGGCCGCCCAGCCCAC...ACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTCTGATTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR CAA 90 bp CTAATCAGAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTGGGGCGCCGGCGGTGTaGTCAGTGTCAGCTCTGCGC +
Preference number: 5 (lower is better)
Translates to: LIRTLNLQSNDMSPWSLCGAPAV*SVSALR
Trigger: GCGCAGAGCTGACACTGACAACACCGCCGGCGCCCC...ACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTCTGATTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS GCA 90 bp TATCTACTGTTTCCGCCCGGATCTTGTTCGCTGAACAACCATTACTaGGGAAGGCGGCGGCCGCCATTTTTAATATGGGCATTAGAGGGT +
Preference number: 5 (lower is better)
Translates to: YLLFPPGSCSLNNHY*GRRRPPFLIWALEG
Trigger: ACCCTCTAATGCCCATATTAAAAATGGCGGCCGCCGCCTTCCGCAGTAATGGTTGTTCAGCGAACAAGATCCGGGCGGAAACAGTAGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000481084.5
ENST00000682652.1
CDS CCA 90 bp GTCATGTTGTTACATTCAGTGAATTCACCATCTTCAGTCTCACTCTaGTGTACTGTCACCAGCTGGAGGCTCTCTGCCACCTGGAGGGAC +
Preference number: 5 (lower is better)
Translates to: VMLLHSVNSPSSVSL*CTVTSWRLSATWRD
Trigger: GTCCCTCCAGGTGGCAGAGAGCCTCCAGCTGGTGACAGTACACCAGAGTGAGACTGAAGATGGTGAATTCACTGAATGTAACAACATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000445653.6
ENST00000461999.1
ENST00000524658.2
ENST00000530052.2
ENST00000682192.1
ENST00000682404.1
ENST00000682517.1
ENST00000682665.1
ENST00000682691.1
ENST00000683558.1
ENST00000684142.1
ENST00000684252.1
ENST00000684255.1
ENST00000684345.1
ENST00000684499.1
ENST00000684682.1
CDS CCA 90 bp CGAATGGAGAAGGTGATGGCACTGCCCAGGATCTGCAAGGAGAAATaGACTGGAGTAAGAATCACGCAGAAAGGGAGACACGGAGGTATA +
Preference number: 5 (lower is better)
Translates to: RMEKVMALPRICKEK*TGVRITQKGRHGGI
Trigger: TATACCTCCGTGTCTCCCTTTCTGCGTGATTCTTACTCCAGTCCATTTCTCCTTGCAGATCCTGGGCAGTGCCATCACCTTCTCCATTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000461999.1
ENST00000524658.2
ENST00000530052.2
ENST00000682191.1
ENST00000682192.1
ENST00000682404.1
ENST00000682652.1
ENST00000682665.1
ENST00000682883.1
ENST00000683558.1
ENST00000684252.1
ENST00000684315.1
ENST00000684682.1
CDS-3UTR CAA 90 bp TGGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAAGCGAGACGATCAAATaGATCAGCAGCGGCATGGGC +
Preference number: 5 (lower is better)
Translates to: WPKFYPKNQWFLESQDSESETIK*ISSGMG
Trigger: GCCCATGCCGCTGCTGATCAATTTGATCGTCTCGCT...TTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CAA 90 bp AAAGGGTATCATGAAGTAGAGGGAAAAGACATGATCATCCCGACAATCACCTTCATCGGGCGGAAGGGCTaGGGCACCACAATGGTCGTG +
Preference number: 5 (lower is better)
Translates to: KGYHEVEGKDMIIPTITFIGRKG*GTTMVV
Trigger: CACGACCATTGTGGTGCCCAAGCCCTTCCGCCCGAT...GAAGGTGATTGTCGGGATGATCATGTCTTTTCCCTCTACTTCATGATACCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
CDS-3UTR CAA 90 bp GCTGTATCCCACCCTATGAGGCTGCAAAGATGGGATGGAGAGGGAGAGAGTAGCTCCAGTTTGCCTGTCTaGATATTGAGTCTGGGTATG +
Preference number: 5 (lower is better)
Translates to: AVSHPMRLQRWDGEGESSSSLPV*ILSLGM
Trigger: CATACCCAGACTCAATATCAAGACAGGCAAACTGGA...GCTACTCTCTCCCTCTCCATCCCATCTTTGCAGCCTCATAGGGTGGGATACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CAA 90 bp CCCAAGTCCAGATGCAGGCCAAGTATCGGGCGGAAGGGCTTGGGCACCACAATGACTTTAAGTAGCAAGTaGATGAGGGTCATGTTGTTA +
Preference number: 5 (lower is better)
Translates to: PKSRCRPSIGRKGLGTTMTLSSK*MRVMLL
Trigger: TAACAACATGACCCTCATCAACTTGCTACTTAAAGT...CATTGTGGTGCCCAAGCCCTTCCGCCCGATACTTGGCCTGCATCTGGACTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
CDS-3UTR CAA 90 bp GCTGTATCCCACCCTATGAGGCTGCAAAGATGGGATGGAGAGGGAGAGAGTAGCGGAGAGAGTAGCAAGTaGCAGAAAGCCATAGGTAAA +
Preference number: 5 (lower is better)
Translates to: AVSHPMRLQRWDGEGESSGESSK*QKAIGK
Trigger: TTTACCTATGGCTTTCTGCAACTTGCTACTCTCTCC...GCTACTCTCTCCCTCTCCATCCCATCTTTGCAGCCTCATAGGGTGGGATACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS CCA 90 bp TGGGTATTTTGGGAGAGGGTGAAAGAAAGTAGTTTTGCTCTGGACTaGGTGCTGTTAGAAAGCAGGAGTAATTCATGGCCGGGTGCGGTG +
Preference number: 5 (lower is better)
Translates to: WVFWERVKESSFALD*VLLESRSNSWPGAV
Trigger: CACCGCACCCGGCCATGAATTACTCCTGCTTTCTAACAGCACCCAGTCCAGAGCAAAACTACTTTCTTTCACCCTCTCCCAAAATACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524658.2
CDS CCA 90 bp GTCATGTTGTTACATTCAGTGAATTCACCATCTTCAGTCTCACTCTaGTGTACTGTCACCAGCTGGAGGCTCTCTGCCACCTGGGTATGC +
Preference number: 5 (lower is better)
Translates to: VMLLHSVNSPSSVSL*CTVTSWRLSATWVC
Trigger: GCATACCCAGGTGGCAGAGAGCCTCCAGCTGGTGACAGTACACCAGAGTGAGACTGAAGATGGTGAATTCACTGAATGTAACAACATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682232.1
ENST00000682326.1
CDS-3UTR CAA 90 bp CTAATCAGAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTCCCAGCAACTCTGACTaGAGCCGCCGTCGGGACACC +
Preference number: 5 (lower is better)
Translates to: LIRTLNLQSNDMSPWSLCPSNSD*SRRRDT
Trigger: GGTGTCCCGACGGCGGCTCAAGTCAGAGTTGCTGGG...ACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTCTGATTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000414373.5
CDS-3UTR CAA 90 bp GAGTCGAACGAGCTGATATCGAATGGAGAAGGTGATGGCACTGCCCAGGATCTGTCCAACTCTACCAGGTaGAAGACAATGATGGAAGCA +
Preference number: 5 (lower is better)
Translates to: ESNELISNGEGDGTAQDLSNSTR*KTMMEA
Trigger: TGCTTCCATCATTGTCTTCAACCTGGTAGAGTTGGA...CAGATCCTGGGCAGTGCCATCACCTTCTCCATTCGATATCAGCTCGTTCGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000442480.1
ENST00000638850.1
ENST00000640747.1
CDS-3UTR CAA 90 bp TCGAACGAGCTGATATCGAATGGAGAAGGTGATGGCACTGCCCAGGATCTGCAGTCCAACTCTACCAGGTaGAAGACAATGATGGAAGCA +
Preference number: 5 (lower is better)
Translates to: SNELISNGEGDGTAQDLQSNSTR*KTMMEA
Trigger: TGCTTCCATCATTGTCTTCAACCTGGTAGAGTTGGA...CTGCAGATCCTGGGCAGTGCCATCACCTTCTCCATTCGATATCAGCTCGTTCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000442480.1
ENST00000638850.1
ENST00000640747.1
CDS-3UTR CAA 90 bp GAGTCGAACGAGCTGATATCGAATGGAGAAGGTGATGGCACTGCCCAGGATCTGAATAGTAGCATGGTCTaGCTGAAGTGTCCCAAGATG +
Preference number: 5 (lower is better)
Translates to: ESNELISNGEGDGTAQDLNSSMV*LKCPKM
Trigger: CATCTTGGGACACTTCAGCAAGACCATGCTACTATT...CAGATCCTGGGCAGTGCCATCACCTTCTCCATTCGATATCAGCTCGTTCGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000638850.1
ENST00000640747.1
CDS-3UTR CAA 90 bp GAGTCGAACGAGCTGATATCGAATGGAGAAGGTGATGGCACTGCCCAGGATCTGTCCAGTTTGCCTGTCTaGATATTGAGTCTGGGTATG +
Preference number: 5 (lower is better)
Translates to: ESNELISNGEGDGTAQDLSSLPV*ILSLGM
Trigger: CATACCCAGACTCAATATCAAGACAGGCAAACTGGA...CAGATCCTGGGCAGTGCCATCACCTTCTCCATTCGATATCAGCTCGTTCGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000442480.1
ENST00000638850.1
ENST00000640747.1
CDS-3UTR CAA 90 bp CACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTTCCTAGCCCTAGTTGGACCAAGCGCTaGGGTGGTCCCTTCAGCCTT +
Preference number: 5 (lower is better)
Translates to: HLIYNQMTCHRGACVPSPSWTKR*GGPFSL
Trigger: AAGGCTGAAGGGACCACCCAAGCGCTTGGTCCAACT...AGGGCTAGGAACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS GCA 90 bp GTAGACATAGTACAGGATTCTTCATGGTGGGGGAATGCCTTACACTaGTCCTTCACAAAGCAGTTCAGGAAGGGGAAAGGGATGAAGCAG +
Preference number: 5 (lower is better)
Translates to: VDIVQDSSWWGNALH*SFTKQFRKGKGMKQ
Trigger: CTGCTTCATCCCTTTCCCCTTCCTGAACTGCTTTGTGAAGGAGCAGTGTAAGGCATTCCCCCACCATGAAGAATCCTGTACTATGTCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481084.5
CDS-3UTR CAA 90 bp ACTTTAAGTAGCAAGTTGATGAGGGTCATGTTGTTACATTCAGTGAATTCACCACCCAGCAACTCTGACTaGAGCCGCCGTCGGGACACC +
Preference number: 5 (lower is better)
Translates to: TLSSKLMRVMLLHSVNSPPSNSD*SRRRDT
Trigger: GGTGTCCCGACGGCGGCTCAAGTCAGAGTTGCTGGG...TGGTGAATTCACTGAATGTAACAACATGACCCTCATCAACTTGCTACTTAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
CDS-3UTR CAA 90 bp TGGCCAGCCTCTAGGCCGTTAATTCCTGCTAGGATATTGATGGCATTGGTACAGAGGATATTGATGGCATaGGTACAGAACACTGCCAGC +
Preference number: 5 (lower is better)
Translates to: WPASRPLIPARILMALVQRILMA*VQNTAS
Trigger: GCTGGCAGTGTTCTGTACCAATGCCATCAATATCCT...CTGTACCAATGCCATCAATATCCTAGCAGGAATTAACGGCCTAGAGGCTGGCCA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
CDS-3UTR CAA 90 bp ATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCACAGAGAAAGGATATTGATGGCATaGGTACAGAACACTGCCAGC +
Preference number: 5 (lower is better)
Translates to: ISSQQRARNAQDANDHRERILMA*VQNTAS
Trigger: GCTGGCAGTGTTCTGTACCAATGCCATCAATATCCT...TTCTCTGTGATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CAA 90 bp AAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCTTGCCTGTCTTGATATaGAGTCTGGGTATGCGGTGG +
Preference number: 5 (lower is better)
Translates to: KIQSVVSRGQETPRMPMILPVLI*SLGMRW
Trigger: CCACCGCATACCCAGACTCAATATCAAGACAGGCAA...GATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CAA 90 bp GGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAATTGCCTGTCTTGATATaGAGTCTGGGTATGCGGTGG +
Preference number: 5 (lower is better)
Translates to: GPSSIPKTSGSLRVRTLKLPVLI*SLGMRW
Trigger: CCACCGCATACCCAGACTCAATATCAAGACAGGCAA...TTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CAA 90 bp TGGGGCATGAAGAATAGTAGCATGGTCTTGCTGAAGTGTCCCAAGATGCCCACCTCCAGTTTGCCTGTCTaGATATTGAGTCTGGGTATG +
Preference number: 5 (lower is better)
Translates to: WGMKNSSMVLLKCPKMPTSSLPV*ILSLGM
Trigger: CATACCCAGACTCAATATCAAGACAGGCAAACTGGA...GGTGGGCATCTTGGGACACTTCAGCAAGACCATGCTACTATTCTTCATGCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000640102.1
ENST00000640747.1
CDS-3UTR CAA 90 bp AGTACAGGATTCCCAAGTCCAGATGCAGGCCAAGTATCGGGCGGAAGGGCTTGGACTTTAAGTAGCAAGTaGATGAGGGTCATGTTGTTA +
Preference number: 5 (lower is better)
Translates to: STGFPSPDAGQVSGGRAWTLSSK*MRVMLL
Trigger: TAACAACATGACCCTCATCAACTTGCTACTTAAAGT...CCAAGCCCTTCCGCCCGATACTTGGCCTGCATCTGGACTTGGGAATCCTGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
CDS-3UTR CAA 90 bp GTTCCTAGCCCTGGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCGGAGAGAGTAGCAAGTaGCAGAAAGCCATAGGTAAA +
Preference number: 5 (lower is better)
Translates to: VPSPGPSSIPKTSGSLRVGESSK*QKAIGK
Trigger: TTTACCTATGGCTTTCTGCAACTTGCTACTCTCTCC...GACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCCAGGGCTAGGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CAA 90 bp ATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAACTTTATTGTCTCCATaGAGAGCATGTGGCCCCCTG +
Preference number: 5 (lower is better)
Translates to: IGKIQSVVSRGQETPRMPTLLSP*RACGPL
Trigger: CAGGGGGCCACATGCTCTCAATGGAGACAATAAAGT...TGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTTACCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
CDS-3UTR CAA 90 bp ATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAAAGATGAATGCCTCCTaGTACCACGTGTCTGACACC +
Preference number: 5 (lower is better)
Translates to: IGKIQSVVSRGQETPRMPKMNAS*YHVSDT
Trigger: GGTGTCAGACACGTGGTACAAGGAGGCATTCATCTT...TGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTTACCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS-3UTR CAA 90 bp AAAGCCATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGGAGCGGAAATGCCAATaGCCCGGTTCCAAGATGAAT +
Preference number: 5 (lower is better)
Translates to: KAIGKIQSVVSRGQETPRERKCQ*PGSKMN
Trigger: ATTCATCTTGGAACCGGGCAATTGGCATTTCCGCTC...CCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTTACCTATGGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS CCA 90 bp GTCATGTTGTTACATTCAGTGAATTCACCATCTTCAGTCTCACTCTaGTGTACTGTCACCAGCTGGAGGCTCTCTGCCACCTCCTTGTTA +
Preference number: 5 (lower is better)
Translates to: VMLLHSVNSPSSVSL*CTVTSWRLSATSLL
Trigger: TAACAAGGAGGTGGCAGAGAGCCTCCAGCTGGTGACAGTACACCAGAGTGAGACTGAAGATGGTGAATTCACTGAATGTAACAACATGAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638850.1
CDS-3UTR CAA 90 bp ACAATGATCAAGGGACTCAGACATCATAGAAGAGTCGAACGAGCTGATATCGAAAGCGAGACGATCAAATaGATCAGCAGCGGCATGGGC +
Preference number: 5 (lower is better)
Translates to: TMIKGLRHHRRVERADIESETIK*ISSGMG
Trigger: GCCCATGCCGCTGCTGATCAATTTGATCGTCTCGCT...TTCGATATCAGCTCGTTCGACTCTTCTATGATGTCTGAGTCCCTTGATCATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640747.1
CDS-3UTR CAA 90 bp ATGAGGGTCATGTTGTTACATTCAGTGAATTCACCATCTTCAGTCTCACTCTGGAGCGAGACGATCAAATaGATCAGCAGCGGCATGGGC +
Preference number: 5 (lower is better)
Translates to: MRVMLLHSVNSPSSVSLWSETIK*ISSGMG
Trigger: GCCCATGCCGCTGCTGATCAATTTGATCGTCTCGCT...CCAGAGTGAGACTGAAGATGGTGAATTCACTGAATGTAACAACATGACCCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
CDS-3UTR CAA 90 bp ATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAAGGATATTGATGGCATaGGTACAGAACACTGCCAGC +
Preference number: 5 (lower is better)
Translates to: IGKIQSVVSRGQETPRMPRILMA*VQNTAS
Trigger: GCTGGCAGTGTTCTGTACCAATGCCATCAATATCCT...TGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTTACCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CAA 90 bp AGGAAGTTGAACACCTGGGGCATGAAGAATAGTAGCATGGTCTTGCTGAAGTGTTTGCCTGTCTTGATATaGAGTCTGGGTATGCGGTGG +
Preference number: 5 (lower is better)
Translates to: RKLNTWGMKNSSMVLLKCLPVLI*SLGMRW
Trigger: CCACCGCATACCCAGACTCAATATCAAGACAGGCAA...ACACTTCAGCAAGACCATGCTACTATTCTTCATGCCCCAGGTGTTCAACTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000640102.1
ENST00000640747.1
CDS-3UTR CAA 90 bp ATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCACAGAGAAGGAGAGAGTAGCAAGTaGCAGAAAGCCATAGGTAAA +
Preference number: 5 (lower is better)
Translates to: ISSQQRARNAQDANDHREGESSK*QKAIGK
Trigger: TTTACCTATGGCTTTCTGCAACTTGCTACTCTCTCC...TTCTCTGTGATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CAA 90 bp TTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTTCCTAGCCCTGGCACTTTATTGTCTCCATaGAGAGCATGTGGCCCCCTG +
Preference number: 5 (lower is better)
Translates to: LIYNQMTCHRGACVPSPGTLLSP*RACGPL
Trigger: CAGGGGGCCACATGCTCTCAATGGAGACAATAAAGT...GCCAGGGCTAGGAACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
CDS-3UTR CAA 90 bp GCTGTAGGTAGCAGCAGCTTATGGCGCCAGCGCAGATTCAGTACATCATCCGCAAAAGACAACACTTTATaGTCTCCATTGAGAGCATGT +
Preference number: 5 (lower is better)
Translates to: AVGSSSLWRQRRFSTSSAKDNTL*SPLRAC
Trigger: ACATGCTCTCAATGGAGACAATAAAGTGTTGTCTTT...TGCGGATGATGTACTGAATCTGCGCTGGCGCCATAAGCTGCTGCTACCTACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392834.7
CDS-3UTR CAA 90 bp TCAAGGGACTCAGACATCATAGAAGAGTCGAACGAGCTGATATCGAATGGAGAAAGACGCGCCTGTTTCTaGCAGGAAACCTGTTGCCAA +
Preference number: 5 (lower is better)
Translates to: SRDSDIIEESNELISNGERRACF*QETCCQ
Trigger: TTGGCAACAGGTTTCCTGCAAGAAACAGGCGCGTCT...TTCTCCATTCGATATCAGCTCGTTCGACTCTTCTATGATGTCTGAGTCCCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442480.1
CDS CCA 90 bp AAACTCCATAGAGGTATGCGCAGGTTTAGCTTCACCACCACAAGGTaGGTTATGATAAGGGCCATCTTTGCCATGTGTTCAGGTAGTTGT +
Preference number: 5 (lower is better)
Translates to: KLHRGMRRFSFTTTR*VMIRAIFAMCSGSC
Trigger: ACAACTACCTGAACACATGGCAAAGATGGCCCTTATCATAACCCACCTTGTGGTGGTGAAGCTAAACCTGCGCATACCTCTATGGAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000461999.1
ENST00000533687.1
ENST00000682404.1
ENST00000682517.1
ENST00000683955.1
CDS-3UTR CAA 90 bp CCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAATGAGGATATTGATGGCATaGGTACAGAACACTGCCAGC +
Preference number: 5 (lower is better)
Translates to: PKFYPKNQWFLESQDSEMRILMA*VQNTAS
Trigger: GCTGGCAGTGTTCTGTACCAATGCCATCAATATCCT...CATTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CAA 90 bp AGTAGAGGGAAAAGACATGATCATCCCGACAATCACCTTCCAACTCTACCAGGTAGGATATTGATGGCATaGGTACAGAACACTGCCAGC +
Preference number: 5 (lower is better)
Translates to: SRGKRHDHPDNHLPTLPGRILMA*VQNTAS
Trigger: GCTGGCAGTGTTCTGTACCAATGCCATCAATATCCT...ACCTGGTAGAGTTGGAAGGTGATTGTCGGGATGATCATGTCTTTTCCCTCTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
CDS-3UTR CAA 90 bp AAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCTCCAACTCTACCAGGTaGAAGACAATGATGGAAGCA +
Preference number: 5 (lower is better)
Translates to: KIQSVVSRGQETPRMPMISNSTR*KTMMEA
Trigger: TGCTTCCATCATTGTCTTCAACCTGGTAGAGTTGGA...GATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CAA 90 bp TGGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAATCCAACTCTACCAGGTaGAAGACAATGATGGAAGCA +
Preference number: 5 (lower is better)
Translates to: WPKFYPKNQWFLESQDSESNSTR*KTMMEA
Trigger: TGCTTCCATCATTGTCTTCAACCTGGTAGAGTTGGA...TTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CAA 90 bp ATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAAATAGTAGCATGGTCTaGCTGAAGTGTCCCAAGATG +
Preference number: 5 (lower is better)
Translates to: IGKIQSVVSRGQETPRMPNSSMV*LKCPKM
Trigger: CATCTTGGGACACTTCAGCAAGACCATGCTACTATT...TGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTTACCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CAA 90 bp GGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAAAATAGTAGCATGGTCTaGCTGAAGTGTCCCAAGATG +
Preference number: 5 (lower is better)
Translates to: GPSSIPKTSGSLRVRTLKNSSMV*LKCPKM
Trigger: CATCTTGGGACACTTCAGCAAGACCATGCTACTATT...TTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CAA 90 bp ATCAAGGGACTCAGACATCATAGAAGAGTCGAACGAGCTGATATCGAATGGAGATTGCCTGTCTTGATATaGAGTCTGGGTATGCGGTGG +
Preference number: 5 (lower is better)
Translates to: IKGLRHHRRVERADIEWRLPVLI*SLGMRW
Trigger: CCACCGCATACCCAGACTCAATATCAAGACAGGCAA...TCTCCATTCGATATCAGCTCGTTCGACTCTTCTATGATGTCTGAGTCCCTTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000442480.1
ENST00000638850.1
ENST00000640747.1
CDS-3UTR CAA 90 bp ATAGTACAGGATTCCCAAGTCCAGATGCAGGCCAAGTATCGGGCGGAAGGGCTTTTGATGAGGGTCATGTaGTTACATTCAGTGAATTCA +
Preference number: 5 (lower is better)
Translates to: IVQDSQVQMQAKYRAEGLLMRVM*LHSVNS
Trigger: TGAATTCACTGAATGTAACAACATGACCCTCATCAA...AAGCCCTTCCGCCCGATACTTGGCCTGCATCTGGACTTGGGAATCCTGTACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
CDS-3UTR CAA 90 bp ATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAGGAGAGAGTAGCAAGTaGCAGAAAGCCATAGGTAAA +
Preference number: 5 (lower is better)
Translates to: IGKIQSVVSRGQETPRMPGESSK*QKAIGK
Trigger: TTTACCTATGGCTTTCTGCAACTTGCTACTCTCTCC...TGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTTACCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS TCA 90 bp TTAGGAATGTGGATCTATTTAATGCTTTCAAGTTCCCCTTGGATCTaGTGTAGGACTAGGTTCCCCATTCCTCAAGGTCAGGATGGCAGC +
Preference number: 5 (lower is better)
Translates to: LGMWIYLMLSSSPWI*CRTRFPIPQGQDGS
Trigger: GCTGCCATCCTGACCTTGAGGAATGGGGAACCTAGTCCTACATCAGATCCAAGGGGAACTTGAAAGCATTAAATAGATCCACATTCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000445653.6
ENST00000461999.1
ENST00000524658.2
ENST00000525456.5
ENST00000530052.2
ENST00000682192.1
ENST00000682404.1
ENST00000682517.1
ENST00000682665.1
ENST00000682691.1
ENST00000683558.1
ENST00000684142.1
ENST00000684252.1
ENST00000684255.1
ENST00000684345.1
ENST00000684499.1
ENST00000684682.1
CDS-3UTR CAA 90 bp AGGACAATGATCAAGGGACTCAGACATCATAGAAGAGTCGAACGAGCTGATATCAGGATATTGATGGCATaGGTACAGAACACTGCCAGC +
Preference number: 5 (lower is better)
Translates to: RTMIKGLRHHRRVERADIRILMA*VQNTAS
Trigger: GCTGGCAGTGTTCTGTACCAATGCCATCAATATCCT...GATATCAGCTCGTTCGACTCTTCTATGATGTCTGAGTCCCTTGATCATTGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000442480.1
ENST00000636404.1
ENST00000638850.1
ENST00000640747.1
CDS-3UTR CAA 90 bp CCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAATGTCCAACTCTACCAGGTaGAAGACAATGATGGAAGCA +
Preference number: 5 (lower is better)
Translates to: PKFYPKNQWFLESQDSEMSNSTR*KTMMEA
Trigger: TGCTTCCATCATTGTCTTCAACCTGGTAGAGTTGGA...CATTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CAA 90 bp CCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAATGAATAGTAGCATGGTCTaGCTGAAGTGTCCCAAGATG +
Preference number: 5 (lower is better)
Translates to: PKFYPKNQWFLESQDSEMNSSMV*LKCPKM
Trigger: CATCTTGGGACACTTCAGCAAGACCATGCTACTATT...CATTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CAA 90 bp GAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTTCCTAGCTTGCCTGTCTTGATATaGAGTCTGGGTATGCGGTGG +
Preference number: 5 (lower is better)
Translates to: EHLIYNQMTCHRGACVPSLPVLI*SLGMRW
Trigger: CCACCGCATACCCAGACTCAATATCAAGACAGGCAA...GCTAGGAACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
CDS-3UTR CAA 90 bp ACAATGATGGAAGCAGAAATGACTAGTGACTGGCCAGCCTCTAGGCCGTTAATTTCCAGTTTGCCTGTCTaGATATTGAGTCTGGGTATG +
Preference number: 5 (lower is better)
Translates to: TMMEAEMTSDWPASRPLISSLPV*ILSLGM
Trigger: CATACCCAGACTCAATATCAAGACAGGCAAACTGGA...AATTAACGGCCTAGAGGCTGGCCAGTCACTAGTCATTTCTGCTTCCATCATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000640102.1
ENST00000640747.1
CDS-3UTR CAA 90 bp CCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAATGTCCAGTTTGCCTGTCTaGATATTGAGTCTGGGTATG +
Preference number: 5 (lower is better)
Translates to: PKFYPKNQWFLESQDSEMSSLPV*ILSLGM
Trigger: CATACCCAGACTCAATATCAAGACAGGCAAACTGGA...CATTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CAA 90 bp AGTAGAGGGAAAAGACATGATCATCCCGACAATCACCTTCCAACTCTACCAGGTTCCAGTTTGCCTGTCTaGATATTGAGTCTGGGTATG +
Preference number: 5 (lower is better)
Translates to: SRGKRHDHPDNHLPTLPGSSLPV*ILSLGM
Trigger: CATACCCAGACTCAATATCAAGACAGGCAAACTGGA...ACCTGGTAGAGTTGGAAGGTGATTGTCGGGATGATCATGTCTTTTCCCTCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000640102.1
ENST00000640747.1
CDS-3UTR CAA 90 bp GTTCCTAGCCCTGGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCTTGATGAGGGTCATGTaGTTACATTCAGTGAATTCA +
Preference number: 5 (lower is better)
Translates to: VPSPGPSSIPKTSGSLRVLMRVM*LHSVNS
Trigger: TGAATTCACTGAATGTAACAACATGACCCTCATCAA...GACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCCAGGGCTAGGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CAA 90 bp TTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTTCCTAGCCCTGGCGGAGAGAGTAGCAAGTaGCAGAAAGCCATAGGTAAA +
Preference number: 5 (lower is better)
Translates to: LIYNQMTCHRGACVPSPGGESSK*QKAIGK
Trigger: TTTACCTATGGCTTTCTGCAACTTGCTACTCTCTCC...GCCAGGGCTAGGAACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
CDS-3UTR CAA 90 bp CCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAATGGGAGAGAGTAGCAAGTaGCAGAAAGCCATAGGTAAA +
Preference number: 5 (lower is better)
Translates to: PKFYPKNQWFLESQDSEMGESSK*QKAIGK
Trigger: TTTACCTATGGCTTTCTGCAACTTGCTACTCTCTCC...CATTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CAA 90 bp CAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCACAGAGAAAGACAACACTTTATaGTCTCCATTGAGAGCATGT +
Preference number: 5 (lower is better)
Translates to: QSVVSRGQETPRMPMITEKDNTL*SPLRAC
Trigger: ACATGCTCTCAATGGAGACAATAAAGTGTTGTCTTT...CTCTGTGATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
CDS CCA 90 bp GCGGCCGCCATTTTTAATATGGGCATTAGAGGGTGGGGATGGAAGTaGAAGAGAAGTGTGATTCCAAATTTCATCCTATGTTCAAGAGTA +
Preference number: 5 (lower is better)
Translates to: AAAIFNMGIRGWGWK*KRSVIPNFILCSRV
Trigger: TACTCTTGAACATAGGATGAAATTTGGAATCACACTTCTCTTCCACTTCCATCCCCACCCTCTAATGCCCATATTAAAAATGGCGGCCGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000481084.5
ENST00000682652.1
CDS-3UTR CAA 90 bp AGGACTTTAAGTAGCAAGTTGATGAGGGTCATGTTGTTACATTCAGTGAATTCAAGCGAGACGATCAAATaGATCAGCAGCGGCATGGGC +
Preference number: 5 (lower is better)
Translates to: RTLSSKLMRVMLLHSVNSSETIK*ISSGMG
Trigger: GCCCATGCCGCTGCTGATCAATTTGATCGTCTCGCT...TGAATTCACTGAATGTAACAACATGACCCTCATCAACTTGCTACTTAAAGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640102.1
ENST00000640747.1
CDS-3UTR CAA 90 bp GGCCCAAGGACTTTAAGTAGCAAGTTGATGAGGGTCATGTTGTTACATTCAGTGTCCAACTCTACCAGGTaGAAGACAATGATGGAAGCA +
Preference number: 5 (lower is better)
Translates to: GPRTLSSKLMRVMLLHSVSNSTR*KTMMEA
Trigger: TGCTTCCATCATTGTCTTCAACCTGGTAGAGTTGGA...CACTGAATGTAACAACATGACCCTCATCAACTTGCTACTTAAAGTCCTTGGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000442480.1
ENST00000638850.1
ENST00000640102.1
ENST00000640747.1
CDS-3UTR CAA 90 bp AGCAAGTTGCAGAAAGCCATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAAATAGTAGCATGGTCTaGCTGAAGTGTCCCAAGATG +
Preference number: 5 (lower is better)
Translates to: SKLQKAIGKIQSVVSRGQNSSMV*LKCPKM
Trigger: CATCTTGGGACACTTCAGCAAGACCATGCTACTATT...TTGCCCTCTGCTGACTACTGATTGGATTTTACCTATGGCTTTCTGCAACTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CAA 90 bp ATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCACAGAGAAACTTTAAGTAGCAAGTaGATGAGGGTCATGTTGTTA +
Preference number: 5 (lower is better)
Translates to: ISSQQRARNAQDANDHRETLSSK*MRVMLL
Trigger: TAACAACATGACCCTCATCAACTTGCTACTTAAAGT...TTCTCTGTGATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CAA 90 bp AGGACAATGATCAAGGGACTCAGACATCATAGAAGAGTCGAACGAGCTGATATCGGAGAGAGTAGCAAGTaGCAGAAAGCCATAGGTAAA +
Preference number: 5 (lower is better)
Translates to: RTMIKGLRHHRRVERADIGESSK*QKAIGK
Trigger: TTTACCTATGGCTTTCTGCAACTTGCTACTCTCTCC...GATATCAGCTCGTTCGACTCTTCTATGATGTCTGAGTCCCTTGATCATTGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000636404.1
ENST00000638850.1
ENST00000640747.1
CDS-3UTR CAA 90 bp ATGAGGGTCATGTTGTTACATTCAGTGAATTCACCATCTTCAGTCTCACTCTGGAATAGTAGCATGGTCTaGCTGAAGTGTCCCAAGATG +
Preference number: 5 (lower is better)
Translates to: MRVMLLHSVNSPSSVSLWNSSMV*LKCPKM
Trigger: CATCTTGGGACACTTCAGCAAGACCATGCTACTATT...CCAGAGTGAGACTGAAGATGGTGAATTCACTGAATGTAACAACATGACCCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392834.7
ENST00000638850.1
ENST00000640102.1
ENST00000640747.1
CDS-3UTR CAA 90 bp AAAGCCATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGTTGATGAGGGTCATGTaGTTACATTCAGTGAATTCA +
Preference number: 5 (lower is better)
Translates to: KAIGKIQSVVSRGQETPRLMRVM*LHSVNS
Trigger: TGAATTCACTGAATGTAACAACATGACCCTCATCAA...CCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTTACCTATGGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CAA 90 bp GGCCCAAGTTCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAATTGATGAGGGTCATGTaGTTACATTCAGTGAATTCA +
Preference number: 5 (lower is better)
Translates to: GPSSIPKTSGSLRVRTLKLMRVM*LHSVNS
Trigger: TGAATTCACTGAATGTAACAACATGACCCTCATCAA...TTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGAACTTGGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CAA 90 bp ATAGGTAAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAACTTTAAGTAGCAAGTaGATGAGGGTCATGTTGTTA +
Preference number: 5 (lower is better)
Translates to: IGKIQSVVSRGQETPRMPTLSSK*MRVMLL
Trigger: TAACAACATGACCCTCATCAACTTGCTACTTAAAGT...TGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTTACCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CAA 90 bp AAAATCCAATCAGTAGTCAGCAGAGGGCAAGAAACGCCCAGGATGCCAATGATCACTTTAAGTAGCAAGTaGATGAGGGTCATGTTGTTA +
Preference number: 5 (lower is better)
Translates to: KIQSVVSRGQETPRMPMITLSSK*MRVMLL
Trigger: TAACAACATGACCCTCATCAACTTGCTACTTAAAGT...GATCATTGGCATCCTGGGCGTTTCTTGCCCTCTGCTGACTACTGATTGGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CAA 90 bp AAAGGGTATCATGAAGTAGAGGGAAAAGACATGATCATCCCGACAATCACCTTCGGAGAGAGTAGCAAGTaGCAGAAAGCCATAGGTAAA +
Preference number: 5 (lower is better)
Translates to: KGYHEVEGKDMIIPTITFGESSK*QKAIGK
Trigger: TTTACCTATGGCTTTCTGCAACTTGCTACTCTCTCC...GAAGGTGATTGTCGGGATGATCATGTCTTTTCCCTCTACTTCATGATACCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000640747.1
CDS-3UTR CAA 90 bp CTAATCAGAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTACTTTATTGTCTCCATaGAGAGCATGTGGCCCCCTG +
Preference number: 5 (lower is better)
Translates to: LIRTLNLQSNDMSPWSLCTLLSP*RACGPL
Trigger: CAGGGGGCCACATGCTCTCAATGGAGACAATAAAGT...ACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTCTGATTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
CDS-3UTR CAA 90 bp TTGATGAGGGTCATGTTGTTACATTCAGTGAATTCACCATCTTCAGTCTCACTCTCCAACTCTACCAGGTaGAAGACAATGATGGAAGCA +
Preference number: 5 (lower is better)
Translates to: LMRVMLLHSVNSPSSVSLSNSTR*KTMMEA
Trigger: TGCTTCCATCATTGTCTTCAACCTGGTAGAGTTGGA...GAGTGAGACTGAAGATGGTGAATTCACTGAATGTAACAACATGACCCTCATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000442480.1
ENST00000638850.1
ENST00000640102.1
ENST00000640747.1
CDS-3UTR CAA 90 bp CATGTTGTTACATTCAGTGAATTCACCATCTTCAGTCTCACTCTGGTGTACTGTTCCAACTCTACCAGGTaGAAGACAATGATGGAAGCA +
Preference number: 5 (lower is better)
Translates to: HVVTFSEFTIFSLTLVYCSNSTR*KTMMEA
Trigger: TGCTTCCATCATTGTCTTCAACCTGGTAGAGTTGGA...ACAGTACACCAGAGTGAGACTGAAGATGGTGAATTCACTGAATGTAACAACATG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000442480.1
ENST00000638850.1
ENST00000640102.1
ENST00000640747.1
CDS-3UTR CAA 90 bp TCAGAACACTTAATTTACAATCAAATGACATGTCACCGTGGAGCCTGTGTTCCTTCCAGTTTGCCTGTCTaGATATTGAGTCTGGGTATG +
Preference number: 5 (lower is better)
Translates to: SEHLIYNQMTCHRGACVPSSLPV*ILSLGM
Trigger: CATACCCAGACTCAATATCAAGACAGGCAAACTGGA...AGGAACACAGGCTCCACGGTGACATGTCATTTGATTGTAAATTAAGTGTTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
CDS-3UTR CAA 90 bp TCAGACATCATAGAAGAGTCGAACGAGCTGATATCGAATGGAGAAGGTGATGGCACTTTAAGTAGCAAGTaGATGAGGGTCATGTTGTTA +
Preference number: 5 (lower is better)
Translates to: SDIIEESNELISNGEGDGTLSSK*MRVMLL
Trigger: TAACAACATGACCCTCATCAACTTGCTACTTAAAGT...GCCATCACCTTCTCCATTCGATATCAGCTCGTTCGACTCTTCTATGATGTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000442480.1
ENST00000638850.1
ENST00000640747.1
CDS-3UTR CAA 90 bp TCTATCCCAAAAACCAGTGGTTCCTTGAGAGTCAGGACTCTGAAATGTGAGTGTTTGATGAGGGTCATGTaGTTACATTCAGTGAATTCA +
Preference number: 5 (lower is better)
Translates to: SIPKTSGSLRVRTLKCECLMRVM*LHSVNS
Trigger: TGAATTCACTGAATGTAACAACATGACCCTCATCAA...ACACTCACATTTCAGAGTCCTGACTCTCAAGGAACCACTGGTTTTTGGGATAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000638850.1
ENST00000639704.1
ENST00000640747.1
CDS-3UTR CAA 90 bp ACTTTAAGTAGCAAGTTGATGAGGGTCATGTTGTTACATTCAGTGAATTCACCATCCAACTCTACCAGGTaGAAGACAATGATGGAAGCA +
Preference number: 5 (lower is better)
Translates to: TLSSKLMRVMLLHSVNSPSNSTR*KTMMEA
Trigger: TGCTTCCATCATTGTCTTCAACCTGGTAGAGTTGGA...TGGTGAATTCACTGAATGTAACAACATGACCCTCATCAACTTGCTACTTAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000442480.1
ENST00000638850.1
ENST00000640102.1
ENST00000640747.1
CDS-3UTR CAA 90 bp GGTCATGTTGTTACATTCAGTGAATTCACCATCTTCAGTCTCACTCTGGTGTACTTGATGAGGGTCATGTaGTTACATTCAGTGAATTCA +
Preference number: 5 (lower is better)
Translates to: GHVVTFSEFTIFSLTLVYLMRVM*LHSVNS
Trigger: TGAATTCACTGAATGTAACAACATGACCCTCATCAA...GTACACCAGAGTGAGACTGAAGATGGTGAATTCACTGAATGTAACAACATGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000442480.1
ENST00000638850.1
ENST00000640102.1
ENST00000640747.1
CDS-3UTR CAA 90 bp ACAATGATCAAGGGACTCAGACATCATAGAAGAGTCGAACGAGCTGATATCGAATTGATGAGGGTCATGTaGTTACATTCAGTGAATTCA +
Preference number: 5 (lower is better)
Translates to: TMIKGLRHHRRVERADIELMRVM*LHSVNS
Trigger: TGAATTCACTGAATGTAACAACATGACCCTCATCAA...TTCGATATCAGCTCGTTCGACTCTTCTATGATGTCTGAGTCCCTTGATCATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000442480.1
ENST00000638850.1
ENST00000640747.1
CDS-3UTR CAA 90 bp ATGTTGTTACATTCAGTGAATTCACCATCTTCAGTCTCACTCTGGTGTACTGTCACTTTAAGTAGCAAGTaGATGAGGGTCATGTTGTTA +
Preference number: 5 (lower is better)
Translates to: MLLHSVNSPSSVSLWCTVTLSSK*MRVMLL
Trigger: TAACAACATGACCCTCATCAACTTGCTACTTAAAGT...GACAGTACACCAGAGTGAGACTGAAGATGGTGAATTCACTGAATGTAACAACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000442480.1
ENST00000638850.1
ENST00000640102.1
ENST00000640747.1
CDS-3UTR CAA 90 bp AGGACTTTAAGTAGCAAGTTGATGAGGGTCATGTTGTTACATTCAGTGAATTCATTGATGAGGGTCATGTaGTTACATTCAGTGAATTCA +
Preference number: 5 (lower is better)
Translates to: RTLSSKLMRVMLLHSVNSLMRVM*LHSVNS
Trigger: TGAATTCACTGAATGTAACAACATGACCCTCATCAA...TGAATTCACTGAATGTAACAACATGACCCTCATCAACTTGCTACTTAAAGTCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000442480.1
ENST00000638850.1
ENST00000640102.1
ENST00000640747.1
CDS-3UTR CAA 90 bp ACTTTAAGTAGCAAGTTGATGAGGGTCATGTTGTTACATTCAGTGAATTCACCAACTTTAAGTAGCAAGTaGATGAGGGTCATGTTGTTA +
Preference number: 5 (lower is better)
Translates to: TLSSKLMRVMLLHSVNSPTLSSK*MRVMLL
Trigger: TAACAACATGACCCTCATCAACTTGCTACTTAAAGT...TGGTGAATTCACTGAATGTAACAACATGACCCTCATCAACTTGCTACTTAAAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392834.7
ENST00000414373.5
ENST00000442480.1
ENST00000638850.1
ENST00000640102.1
ENST00000640747.1
CDS GCA 72 bp TGCGGGAGCTGGGCGTGTGGCGCTCGCTGCTGCGGCTaGGGGCGACTCGGGCTGGCGCCGCCGAGGAGCCAG +
Preference number: 6 (lower is better)
Translates to: CGSWACGARCCG*GRLGLAPPRSQ
Trigger: CTGGCTCCTCGGCGGCGCCAGCCCGAGTCGCCCGCAGCCGCAGCAGCGAGCGCCACACGCCCAGCTCCCGCA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS CCA 72 bp CCCAGCCGGGACCGGGATCGGAGCCCGCGCGGAGCATaGATCCGGGCTGGGGGCAGCGGGACGTGGGCTGGG +
Preference number: 6 (lower is better)
Translates to: PSRDRDRSPRGA*IRAGGSGTWAG
Trigger: CCCAGCCCACGTCCCGCTGCCCCCAGCCCGGATCCATGCTCCGCGCGGGCTCCGATCCCGGTCCCGGCTGGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS CCA 72 bp CCGGGATCGGAGCCCGCGCGGAGCATGGATCCGGGCTaGGGGCAGCGGGACGTGGGCTGGGCGGCCTTGCTG +
Preference number: 6 (lower is better)
Translates to: PGSEPARSMDPG*GQRDVGWAALL
Trigger: CAGCAAGGCCGCCCAGCCCACGTCCCGCTGCCCCCAGCCCGGATCCATGCTCCGCGCGGGCTCCGATCCCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS CCA 72 bp ACCAGTCCCCTCCAGGGTCCGGCGGGGCCCGCGCGGTaGGAGGAGTCGGGCACTGGCCGGCGACTAACGGGT +
Preference number: 6 (lower is better)
Translates to: TSPLQGPAGPAR*EESGTGRRLTG
Trigger: ACCCGTTAGTCGCCGGCCAGTGCCCGACTCCTCCCACCGCGCGGGCCCCGCCGGACCCTGGAGGGGACTGGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS GCA 72 bp CTCGCTGCTCACGGTGTTCGCCTGGCTGCTGCAATATaGCCGGGGCTTGTGGCTGGCGCGGGCCCGCGGGGA +
Preference number: 6 (lower is better)
Translates to: LAAHGVRLAAAI*PGLVAGAGPRG
Trigger: TCCCCGCGGGCCCGCGCCAGCCACAAGCCCCGGGCATATTGCAGCAGCCAGGCGAACACCGTGAGCAGCGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS GCA 72 bp TCGCCGCCTCGCTGCTCACGGTGTTCGCCTGGCTGCTaGAATATGCCCGGGGCTTGTGGCTGGCGCGGGCCC +
Preference number: 6 (lower is better)
Translates to: SPPRCSRCSPGC*NMPGACGWRGP
Trigger: GGGCCCGCGCCAGCCACAAGCCCCGGGCATATTGCAGCAGCCAGGCGAACACCGTGAGCAGCGAGGCGGCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS GCA 72 bp TCTTCGCCGCCTCGCTGCTCACGGTGTTCGCCTGGCTaGTGCAATATGCCCGGGGCTTGTGGCTGGCGCGGG +
Preference number: 6 (lower is better)
Translates to: SSPPRCSRCSPG*CNMPGACGWRG
Trigger: CCCGCGCCAGCCACAAGCCCCGGGCATATTGCAGCAGCCAGGCGAACACCGTGAGCAGCGAGGCGGCGAAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS GCA 72 bp TCCCGCCCCTGCCCTAGCCACTCCTTCCTTAGCCCTTaGCCCCTGCCCGGACCCGTGTGCCGCTGCTCACAT +
Preference number: 6 (lower is better)
Translates to: SRPCPSHSFLSP*PLPGPVCRCSH
Trigger: ATGTGAGCAGCGGCACACGGGTCCGGGCAGGGGGCAAGGGCTAAGGAAGGAGTGGCTAGGGCAGGGGCGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000460183.1
ENST00000481084.5
ENST00000530052.2
ENST00000682404.1
ENST00000682517.1
ENST00000682652.1
ENST00000683567.1
ENST00000684315.1
CDS CCA 72 bp CATCGCGACCCCCGAGGACCTCCTCTCCTCGCCCTGTaGCACCCACTAGTCCTGGGCACTCAGCCGCGGAGA +
Preference number: 6 (lower is better)
Translates to: HRDPRGPPLLAL*HPLVLGTQPRR
Trigger: TCTCCGCGGCTGAGTGCCCAGGACTAGTGGGTGCCACAGGGCGAGGAGAGGAGGTCCTCGGGGGTCGCGATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS CCA 72 bp ATCCTCTTCGCCGCCTCGCTGCTCACGGTGTTCGCCTaGCTGCTGCAATATGCCCGGGGCTTGTGGCTGGCG +
Preference number: 6 (lower is better)
Translates to: ILFAASLLTVFA*LLQYARGLWLA
Trigger: CGCCAGCCACAAGCCCCGGGCATATTGCAGCAGCCAGGCGAACACCGTGAGCAGCGAGGCGGCGAAGAGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS GCA 72 bp CAGCGGGCTTGGGTGCGAGCGCTGAACGAGCAGGCCTaGAGAAACGGGGTGAGTTGGACCAAGCGCTTGGGT +
Preference number: 6 (lower is better)
Translates to: QRAWVRALNEQA*RNGVSWTKRLG
Trigger: ACCCAAGCGCTTGGTCCAACTCACCCCGTTTCTGCAGGCCTGCTCGTTCAGCGCTCGCACCCAAGCCCGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS GCA 72 bp CTTAGCCCTTGCCCCCTGCCCGGACCCGTGTGCCGCTaGTCACATCTGCTGTCGGCTGGTTTTGTTGAGGTC +
Preference number: 6 (lower is better)
Translates to: LSPCPLPGPVCR*SHLLSAGFVEV
Trigger: GACCTCAACAAAACCAGCCGACAGCAGATGTGAGCAGCGGCACACGGGTCCGGGCAGGGGGCAAGGGCTAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000460183.1
ENST00000481084.5
ENST00000530052.2
ENST00000682404.1
ENST00000682517.1
ENST00000682652.1
ENST00000683567.1
ENST00000684315.1
CDS CAA 90 bp TTGGGTGCGAGCGCTGAACGAGCAGGCCTGCAGAAACGGGGTGAGTaGGACCAAGCGCTTGGGTGGTCCCTTCAGCCTTTCCTTCCAGGG +
Preference number: 6 (lower is better)
Translates to: LGASAERAGLQKRGE*DQALGWSLQPFLPG
Trigger: CCCTGGAAGGAAAGGCTGAAGGGACCACCCAAGCGCTTGGTCCAACTCACCCCGTTTCTGCAGGCCTGCTCGTTCAGCGCTCGCACCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS CAA 90 bp GTCACTCTTCGCCTTCAAGTCTTTCCGGGAGAACTGGCAGCGGGCTaGGGTGCGAGCGCTGAACGAGCAGGCCTGCAGAAACGGGGTGAG +
Preference number: 6 (lower is better)
Translates to: VTLRLQVFPGELAAG*GASAERAGLQKRGE
Trigger: CTCACCCCGTTTCTGCAGGCCTGCTCGTTCAGCGCTCGCACCCAAGCCCGCTGCCAGTTCTCCCGGAAAGACTTGAAGGCGAAGAGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS TCA 72 bp GCCTCTTCAGGTAACGGGCAAGCTGAGCAGCAGTCCTaGGGCCTCAGCAGTATGGAGTGGCCGCTCCCCACA +
Preference number: 6 (lower is better)
Translates to: ASSGNGQAEQQS*GLSSMEWPLPT
Trigger: TGTGGGGAGCGGCCACTCCATACTGCTGAGGCCTCAGGACTGCTGCTCAGCTTGCCCGTTACCTGAAGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 35 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000445653.6
ENST00000460183.1
ENST00000472016.1
ENST00000481084.5
ENST00000530052.2
ENST00000639704.1
ENST00000640102.1
ENST00000640747.1
ENST00000682191.1
ENST00000682192.1
ENST00000682232.1
ENST00000682326.1
ENST00000682404.1
ENST00000682517.1
ENST00000682652.1
ENST00000682665.1
ENST00000682691.1
ENST00000682791.1
ENST00000682811.1
ENST00000682946.1
ENST00000683143.1
ENST00000683373.1
ENST00000683558.1
ENST00000683955.1
ENST00000684142.1
ENST00000684252.1
ENST00000684255.1
ENST00000684315.1
ENST00000684345.1
ENST00000684499.1
ENST00000684682.1
CDS TCA 72 bp GGGCACATCTGCTGTCGGCTGGTTTTGTTGAGGTCCTaGCCACAGAGGCGCGCAGCAATGAAGTGGCCCCGG +
Preference number: 6 (lower is better)
Translates to: GHICCRLVLLRS*PQRRAAMKWPR
Trigger: CCGGGGCCACTTCATTGCTGCGCGCCTCTGTGGTCAGGACCTCAACAAAACCAGCCGACAGCAGATGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640102.1
CDS GCA 72 bp TCCTTCCTTAGCCCTTGCCCCCTGCCCGGACCCGTGTaGCGCTGCTCACATCTGCTGTCGGCTGGTTTTGTT +
Preference number: 6 (lower is better)
Translates to: SFLSPCPLPGPV*RCSHLLSAGFV
Trigger: AACAAAACCAGCCGACAGCAGATGTGAGCAGCGGCACACGGGTCCGGGCAGGGGGCAAGGGCTAAGGAAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000460183.1
ENST00000481084.5
ENST00000530052.2
ENST00000682404.1
ENST00000682517.1
ENST00000682652.1
ENST00000683567.1
ENST00000684315.1
CDS CCA 72 bp GCGCTGAACGAGCAGGCCTGCAGAAACGGGGTGAGTTaGACCAAGCGCTTGGGTGGTCCCTTCAGCCTTTCC +
Preference number: 6 (lower is better)
Translates to: ALNEQACRNGVS*TKRLGGPFSLS
Trigger: GGAAAGGCTGAAGGGACCACCCAAGCGCTTGGTCCAACTCACCCCGTTTCTGCAGGCCTGCTCGTTCAGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS CCA 72 bp GCCTTCAAGTCTTTCCGGGAGAACTGGCAGCGGGCTTaGGTGCGAGCGCTGAACGAGCAGGCCTGCAGAAAC +
Preference number: 6 (lower is better)
Translates to: AFKSFRENWQRA*VRALNEQACRN
Trigger: GTTTCTGCAGGCCTGCTCGTTCAGCGCTCGCACCCAAGCCCGCTGCCAGTTCTCCCGGAAAGACTTGAAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS CCA 72 bp GCGTCACTCTTCGCCTTCAAGTCTTTCCGGGAGAACTaGCAGCGGGCTTGGGTGCGAGCGCTGAACGAGCAG +
Preference number: 6 (lower is better)
Translates to: ASLFAFKSFREN*QRAWVRALNEQ
Trigger: CTGCTCGTTCAGCGCTCGCACCCAAGCCCGCTGCCAGTTCTCCCGGAAAGACTTGAAGGCGAAGAGTGACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS CCA 72 bp CAGATGGCAAGGAGGGCACCTATCAGGGCCACAAACTaGGGGAGGCTCGGGCAGGTCCATGACTCAAGCCTG +
Preference number: 6 (lower is better)
Translates to: QMARRAPIRATN*GRLGQVHDSSL
Trigger: CAGGCTTGAGTCATGGACCTGCCCGAGCCTCCCCCAGTTTGTGGCCCTGATAGGTGCCCTCCTTGCCATCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000525456.5
ENST00000530052.2
ENST00000533687.1
ENST00000682404.1
ENST00000682517.1
ENST00000682652.1
ENST00000682665.1
ENST00000682691.1
ENST00000682883.1
ENST00000683955.1
ENST00000684252.1
ENST00000684315.1
ENST00000684499.1
CDS CAA 90 bp GTTCTGCCCCGCTGCACCCGCCTATCTACTGTTTCCGCCCGGATCTaGTTCGCTGAACAACCATTACTGCGGAAGGCGGCGGCCGCCATT +
Preference number: 6 (lower is better)
Translates to: VLPRCTRLSTVSARI*FAEQPLLRKAAAAI
Trigger: AATGGCGGCCGCCGCCTTCCGCAGTAATGGTTGTTCAGCGAACAAGATCCGGGCGGAAACAGTAGATAGGCGGGTGCAGCGGGGCAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481084.5
ENST00000682652.1
CDS TCA 72 bp TCTGGGATCTGCTGTCGGCTGGTTTTGTTGAGGTCCTaGCCACAGAGGCGCGCAGCAATGAAGTGGCCCCGG +
Preference number: 6 (lower is better)
Translates to: SGICCRLVLLRS*PQRRAAMKWPR
Trigger: CCGGGGCCACTTCATTGCTGCGCGCCTCTGTGGTCAGGACCTCAACAAAACCAGCCGACAGCAGATCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 20 transcripts:
ENST00000354202.9
ENST00000409993.6
ENST00000414373.5
ENST00000445653.6
ENST00000472016.1
ENST00000639704.1
ENST00000640747.1
ENST00000682191.1
ENST00000682192.1
ENST00000682326.1
ENST00000682665.1
ENST00000682691.1
ENST00000682811.1
ENST00000682946.1
ENST00000683373.1
ENST00000683558.1
ENST00000683955.1
ENST00000684142.1
ENST00000684252.1
ENST00000684345.1
CDS TCA 72 bp GCTCACATCTGCTGTCGGCTGGTTTTGTTGAGGTCCTaGCCACAGAGGCGCGCAGCAATGAAGTGGCCCCGG +
Preference number: 6 (lower is better)
Translates to: AHICCRLVLLRS*PQRRAAMKWPR
Trigger: CCGGGGCCACTTCATTGCTGCGCGCCTCTGTGGTCAGGACCTCAACAAAACCAGCCGACAGCAGATGTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000460183.1
ENST00000481084.5
ENST00000530052.2
ENST00000682404.1
ENST00000682517.1
ENST00000682652.1
ENST00000684315.1
CDS TCA 72 bp GCGGCTACCTGGGTATGCGGTGGCGAGGGCAGGGGATaGTATGCAGGAGCTGAGGCAGTGAGTAGAGGAAGT +
Preference number: 6 (lower is better)
Translates to: AATWVCGGEGRG*YAGAEAVSRGS
Trigger: ACTTCCTCTACTCACTGCCTCAGCTCCTGCATATCATCCCCTGCCCTCGCCACCGCATACCCAGGTAGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000461999.1
ENST00000530052.2
ENST00000682191.1
ENST00000682517.1
ENST00000682652.1
ENST00000682665.1
ENST00000682691.1
ENST00000683373.1
ENST00000683558.1
ENST00000684345.1
ENST00000684682.1
CDS TCA 72 bp CTGCTCATCTGCTGTCGGCTGGTTTTGTTGAGGTCCTaGCCACAGAGGCGCGCAGCAATGAAGTGGCCCCGG +
Preference number: 6 (lower is better)
Translates to: LLICCRLVLLRS*PQRRAAMKWPR
Trigger: CCGGGGCCACTTCATTGCTGCGCGCCTCTGTGGTCAGGACCTCAACAAAACCAGCCGACAGCAGATGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683143.1
CDS GCA 72 bp GGACACCGGGGAACCTCTCTAAGGCAACCTATGTTCTaGCCCGCTGCACCCGCCTATCTACTGTTTCCGCCC +
Preference number: 6 (lower is better)
Translates to: GHRGTSLRQPMF*PAAPAYLLFPP
Trigger: GGGCGGAAACAGTAGATAGGCGGGTGCAGCGGGGCAGAACATAGGTTGCCTTAGAGAGGTTCCCCGGTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481084.5
ENST00000682652.1
CDS CCA 72 bp CTCGTGCTAGGAGGCCAGACGAGGGTGGGCATAAACTaGGGAACCCTATGGCTTCTCTTCCCCTCCCGGATC +
Preference number: 6 (lower is better)
Translates to: LVLGGQTRVGIN*GTLWLLFPSRI
Trigger: GATCCGGGAGGGGAAGAGAAGCCATAGGGTTCCCCAGTTTATGCCCACCCTCGTCTGGCCTCCTAGCACGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS CCA 72 bp CAGATGGCAAGGAGGGCACCTATCAGGGCCACAAACTaGGGGAGGCTCGGGCAGGTCCATGACTCAAGCTTC +
Preference number: 6 (lower is better)
Translates to: QMARRAPIRATN*GRLGQVHDSSF
Trigger: GAAGCTTGAGTCATGGACCTGCCCGAGCCTCCCCCAGTTTGTGGCCCTGATAGGTGCCCTCCTTGCCATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414373.5
CDS CCA 72 bp CAGATGGCAAGGAGGGCACCTATCAGGGCCACAAACTaGGGGAGGCTCGGGCAGGTCCATGACTCAAGCATC +
Preference number: 6 (lower is better)
Translates to: QMARRAPIRATN*GRLGQVHDSSI
Trigger: GATGCTTGAGTCATGGACCTGCCCGAGCCTCCCCCAGTTTGTGGCCCTGATAGGTGCCCTCCTTGCCATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682791.1
CDS CAA 72 bp AGCGCTGAACGAGCAGGCCTGCAGAAACGGGGTGAGTaGGACCAAGCGCTTGGGTGGTCCCTTCAGCCTTTC +
Preference number: 6 (lower is better)
Translates to: SAERAGLQKRGE*DQALGWSLQPF
Trigger: GAAAGGCTGAAGGGACCACCCAAGCGCTTGGTCCAACTCACCCCGTTTCTGCAGGCCTGCTCGTTCAGCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS TCA 72 bp CCGCCTATCTACTGTTTCCGCCCGGATCTTGTTCGCTaGACAACCATTACTGCGGAAGGCGGCGGCCGCCAT +
Preference number: 6 (lower is better)
Translates to: PPIYCFRPDLVR*TTITAEGGGRH
Trigger: ATGGCGGCCGCCGCCTTCCGCAGTAATGGTTGTTCAGCGAACAAGATCCGGGCGGAAACAGTAGATAGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481084.5
ENST00000682652.1
CDS TCA 72 bp TCAAGCATCTGCTGTCGGCTGGTTTTGTTGAGGTCCTaGCCACAGAGGCGCGCAGCAATGAAGTGGCCCCGG +
Preference number: 6 (lower is better)
Translates to: SSICCRLVLLRS*PQRRAAMKWPR
Trigger: CCGGGGCCACTTCATTGCTGCGCGCCTCTGTGGTCAGGACCTCAACAAAACCAGCCGACAGCAGATGCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682791.1
CDS TCA 72 bp TCTGCCACCTGGGTATGCGGTGGCGAGGGCAGGGGATaGTATGCAGGAGCTGAGGCAGTGAGTAGAGGAAGT +
Preference number: 6 (lower is better)
Translates to: SATWVCGGEGRG*YAGAEAVSRGS
Trigger: ACTTCCTCTACTCACTGCCTCAGCTCCTGCATATCATCCCCTGCCCTCGCCACCGCATACCCAGGTGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682232.1
ENST00000682326.1
CDS TCA 72 bp GGATTCATCTGCTGTCGGCTGGTTTTGTTGAGGTCCTaGCCACAGAGGCGCGCAGCAATGAAGTGGCCCCGG +
Preference number: 6 (lower is better)
Translates to: GFICCRLVLLRS*PQRRAAMKWPR
Trigger: CCGGGGCCACTTCATTGCTGCGCGCCTCTGTGGTCAGGACCTCAACAAAACCAGCCGACAGCAGATGAATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684682.1
CDS CCA 72 bp AGGATGATAAGGAAAACAGCACCGCTGATCACTCCCTaGGATTCTGGGCTGTGGCCCAGCAGCAAGGGGGCG +
Preference number: 6 (lower is better)
Translates to: RMIRKTAPLITP*DSGLWPSSKGA
Trigger: CGCCCCCTTGCTGCTGGGCCACAGCCCAGAATCCCAGGGAGTGATCAGCGGTGCTGTTTTCCTTATCATCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000460183.1
ENST00000481084.5
ENST00000530052.2
ENST00000682404.1
ENST00000682517.1
ENST00000682652.1
ENST00000682883.1
ENST00000683567.1
ENST00000684315.1
ENST00000684499.1
CDS CAA 72 bp CGCTGCACCCGCCTATCTACTGTTTCCGCCCGGATCTaGTTCGCTGAACAACCATTACTGCGGAAGGCGGCG +
Preference number: 6 (lower is better)
Translates to: RCTRLSTVSARI*FAEQPLLRKAA
Trigger: CGCCGCCTTCCGCAGTAATGGTTGTTCAGCGAACAAGATCCGGGCGGAAACAGTAGATAGGCGGGTGCAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481084.5
ENST00000682652.1
CDS TCA 72 bp TCTTCCCACACCAATCTGAGCAAAACCCAGCAACTCTaGCTTGAGCCGCCGTCGGGACACCGGGGAACCTCT +
Preference number: 6 (lower is better)
Translates to: SSHTNLSKTQQL*LEPPSGHRGTS
Trigger: AGAGGTTCCCCGGTGTCCCGACGGCGGCTCAAGTCAGAGTTGCTGGGTTTTGCTCAGATTGGTGTGGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 28 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000414373.5
ENST00000460183.1
ENST00000472016.1
ENST00000481084.5
ENST00000530052.2
ENST00000639704.1
ENST00000640747.1
ENST00000682191.1
ENST00000682192.1
ENST00000682232.1
ENST00000682326.1
ENST00000682404.1
ENST00000682517.1
ENST00000682652.1
ENST00000682665.1
ENST00000682691.1
ENST00000683373.1
ENST00000683558.1
ENST00000683955.1
ENST00000684142.1
ENST00000684252.1
ENST00000684255.1
ENST00000684315.1
ENST00000684345.1
ENST00000684499.1
ENST00000684682.1
CDS GCA 72 bp CTCACTCTGGTGTACTGTCACCAGCTGGAGGCTCTCTaGCACCTGGAGGGACCAGAGGTGAAGAGAACCTCA +
Preference number: 6 (lower is better)
Translates to: LTLVYCHQLEAL*HLEGPEVKRTS
Trigger: TGAGGTTCTCTTCACCTCTGGTCCCTCCAGGTGGCAGAGAGCCTCCAGCTGGTGACAGTACACCAGAGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000445653.6
ENST00000461999.1
ENST00000524658.2
ENST00000530052.2
ENST00000682192.1
ENST00000682404.1
ENST00000682517.1
ENST00000682665.1
ENST00000682691.1
ENST00000683558.1
ENST00000684142.1
ENST00000684252.1
ENST00000684255.1
ENST00000684345.1
ENST00000684499.1
ENST00000684682.1
CDS GCA 72 bp GGGAACCTCTCTAAGGCAACCTATGTTCTGCCCCGCTaGACCCGCCTATCTACTGTTTCCGCCCGGATCTTG +
Preference number: 6 (lower is better)
Translates to: GNLSKATYVLPR*TRLSTVSARIL
Trigger: CAAGATCCGGGCGGAAACAGTAGATAGGCGGGTGCAGCGGGGCAGAACATAGGTTGCCTTAGAGAGGTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481084.5
ENST00000682652.1
CDS TCA 72 bp CTGTGGCCACAAATCCCAGCAGCGAGACGATCAAATTaGTCAGCAGCGGCATGGGCAATTCCGAGAAGGCCC +
Preference number: 6 (lower is better)
Translates to: LWPQIPAARRSN*SAAAWAIPRRP
Trigger: GGGCCTTCTCGGAATTGCCCATGCCGCTGCTGATCAATTTGATCGTCTCGCTGCTGGGATTTGTGGCCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 35 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000445653.6
ENST00000460183.1
ENST00000472016.1
ENST00000481084.5
ENST00000530052.2
ENST00000639704.1
ENST00000640102.1
ENST00000640747.1
ENST00000682191.1
ENST00000682192.1
ENST00000682232.1
ENST00000682326.1
ENST00000682404.1
ENST00000682517.1
ENST00000682652.1
ENST00000682665.1
ENST00000682691.1
ENST00000682791.1
ENST00000682811.1
ENST00000682946.1
ENST00000683143.1
ENST00000683373.1
ENST00000683558.1
ENST00000683955.1
ENST00000684142.1
ENST00000684252.1
ENST00000684255.1
ENST00000684315.1
ENST00000684345.1
ENST00000684499.1
ENST00000684682.1
CDS TCA 72 bp CAGGGCCACAAACTGGGGGAGGCTCGGGCAGGTCCATaGCTCAAGCCTGCTCCCATTCCACCTTTTAAGAAT +
Preference number: 6 (lower is better)
Translates to: QGHKLGEARAGP*LKPAPIPPFKN
Trigger: ATTCTTAAAAGGTGGAATGGGAGCAGGCTTGAGTCATGGACCTGCCCGAGCCTCCCCCAGTTTGTGGCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000525456.5
ENST00000530052.2
ENST00000533687.1
ENST00000682404.1
ENST00000682517.1
ENST00000682652.1
ENST00000682665.1
ENST00000682691.1
ENST00000682883.1
ENST00000683955.1
ENST00000684252.1
ENST00000684315.1
ENST00000684499.1
CDS CAA 90 bp ATGAGGGTGACTGTGGCCACAAATCCCAGCAGCGAGACGATCAAATaGATCAGCAGCGGCATGGGCAATTCCGAGAAGGCCCACATGGTG +
Preference number: 6 (lower is better)
Translates to: MRVTVATNPSSETIK*ISSGMGNSEKAHMV
Trigger: CACCATGTGGGCCTTCTCGGAATTGCCCATGCCGCTGCTGATCAATTTGATCGTCTCGCTGCTGGGATTTGTGGCCACAGTCACCCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 35 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000445653.6
ENST00000460183.1
ENST00000472016.1
ENST00000481084.5
ENST00000530052.2
ENST00000639704.1
ENST00000640102.1
ENST00000640747.1
ENST00000682191.1
ENST00000682192.1
ENST00000682232.1
ENST00000682326.1
ENST00000682404.1
ENST00000682517.1
ENST00000682652.1
ENST00000682665.1
ENST00000682691.1
ENST00000682791.1
ENST00000682811.1
ENST00000682946.1
ENST00000683143.1
ENST00000683373.1
ENST00000683558.1
ENST00000683955.1
ENST00000684142.1
ENST00000684252.1
ENST00000684255.1
ENST00000684315.1
ENST00000684345.1
ENST00000684499.1
ENST00000684682.1
CDS CAA 90 bp CCAGAGCGGAAATGCCAATTGCCCGGTTCCAAGATGAATGCCTCCTaGTACCACGTGTCTGACACCGCTCACATTCCGGTTCCACGTCAG +
Preference number: 6 (lower is better)
Translates to: PERKCQLPGSKMNAS*YHVSDTAHIPVPRQ
Trigger: CTGACGTGGAACCGGAATGTGAGCGGTGTCAGACACGTGGTACAAGGAGGCATTCATCTTGGAACCGGGCAATTGGCATTTCCGCTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS TCA 72 bp TTTATTATCTGCTGTCGGCTGGTTTTGTTGAGGTCCTaGCCACAGAGGCGCGCAGCAATGAAGTGGCCCCGG +
Preference number: 6 (lower is better)
Translates to: FIICCRLVLLRS*PQRRAAMKWPR
Trigger: CCGGGGCCACTTCATTGCTGCGCGCCTCTGTGGTCAGGACCTCAACAAAACCAGCCGACAGCAGATAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684499.1
CDS CAA 72 bp ACTGTGGCCACAAATCCCAGCAGCGAGACGATCAAATaGATCAGCAGCGGCATGGGCAATTCCGAGAAGGCC +
Preference number: 6 (lower is better)
Translates to: TVATNPSSETIK*ISSGMGNSEKA
Trigger: GGCCTTCTCGGAATTGCCCATGCCGCTGCTGATCAATTTGATCGTCTCGCTGCTGGGATTTGTGGCCACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 35 transcripts:
ENST00000354202.9
ENST00000392834.7
ENST00000409993.6
ENST00000414373.5
ENST00000445653.6
ENST00000460183.1
ENST00000472016.1
ENST00000481084.5
ENST00000530052.2
ENST00000639704.1
ENST00000640102.1
ENST00000640747.1
ENST00000682191.1
ENST00000682192.1
ENST00000682232.1
ENST00000682326.1
ENST00000682404.1
ENST00000682517.1
ENST00000682652.1
ENST00000682665.1
ENST00000682691.1
ENST00000682791.1
ENST00000682811.1
ENST00000682946.1
ENST00000683143.1
ENST00000683373.1
ENST00000683558.1
ENST00000683955.1
ENST00000684142.1
ENST00000684252.1
ENST00000684255.1
ENST00000684315.1
ENST00000684345.1
ENST00000684499.1
ENST00000684682.1
CDS TCA 72 bp TCCAGTTGTGCAGCAACTCTGCAGGATCCAAGGCCCTaGATTCATCTATTCCTGGGGCCTCCACGCACTCAT +
Preference number: 6 (lower is better)
Translates to: SSCAATLQDPRP*IHLFLGPPRTH
Trigger: ATGAGTGCGTGGAGGCCCCAGGAATAGATGAATTCAGGGCCTTGGATCCTGCAGAGTTGCTGCACAACTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461999.1
ENST00000533687.1
ENST00000682404.1
ENST00000682517.1
ENST00000683955.1
CDS TCA 72 bp AGCAAAGTAACAGAAGGTATCTCCCACAAACACCCGTaGTGGGTACCTGTGTGGGGGAAGAGGATCCGAGCC +
Preference number: 6 (lower is better)
Translates to: SKVTEGISHKHP*WVPVWGKRIRA
Trigger: GGCTCGGATCCTCTTCCCCCACACAGGTACCCATCACGGGTGTTTGTGGGAGATACCTTCTGTTACTTTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000461999.1
ENST00000682404.1
ENST00000682517.1
ENST00000683955.1
CDS GCA 72 bp TTTCCGCCCGGATCTTGTTCGCTGAACAACCATTACTaGGGAAGGCGGCGGCCGCCATTTTTAATATGGGCA +
Preference number: 6 (lower is better)
Translates to: FPPGSCSLNNHY*GRRRPPFLIWA
Trigger: TGCCCATATTAAAAATGGCGGCCGCCGCCTTCCGCAGTAATGGTTGTTCAGCGAACAAGATCCGGGCGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000481084.5
ENST00000682652.1
CDS GCA 72 bp GGTAGCAGCAGTTCATGGTGGGGGAATGCCTTACACTaGTCCTTCACAAAGCAGTTCAGGAAGGGGAAAGGG +
Preference number: 6 (lower is better)
Translates to: GSSSSWWGNALH*SFTKQFRKGKG
Trigger: CCCTTTCCCCTTCCTGAACTGCTTTGTGAAGGAGCAGTGTAAGGCATTCCCCCACCATGAACTGCTGCTACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639704.1
CDS CCA 72 bp AGTTCTGCTCATCACCTCTCCGAGTTCCAGGCTGCCTaGGTTAGTTCTGAGTCTTCACGTGTGGTCAAGCAC +
Preference number: 6 (lower is better)
Translates to: SSAHHLSEFQAA*VSSESSRVVKH
Trigger: GTGCTTGACCACACGTGAAGACTCAGAACTAACCCAGGCAGCCTGGAACTCGGAGAGGTGATGAGCAGAACT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000460183.1
ENST00000481084.5
ENST00000530052.2
ENST00000682404.1
ENST00000682517.1
ENST00000682652.1
ENST00000682883.1
ENST00000683567.1
ENST00000684315.1
CDS CCA 72 bp ACCAATCCCTTCTCTCACATCACACCCTATGGGCACTaGACTAGCCCTGACCCTAGTTCTGACTCAGAGGAG +
Preference number: 6 (lower is better)
Translates to: TNPFSHITPYGH*TSPDPSSDSEE
Trigger: CTCCTCTGAGTCAGAACTAGGGTCAGGGCTAGTCCAGTGCCCATAGGGTGTGATGTGAGAGAAGGGATTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000461999.1
ENST00000533687.1
ENST00000682404.1
ENST00000682517.1
ENST00000683955.1
CDS CCA 72 bp ATGGGTACCTGTGTGGGGGAAGAGGATCCGAGCCAGTaGCAAGAGGCATTACCAATCCCTTCTCTCACATCA +
Preference number: 6 (lower is better)
Translates to: MGTCVGEEDPSQ*QEALPIPSLTS
Trigger: TGATGTGAGAGAAGGGATTGGTAATGCCTCTTGCCACTGGCTCGGATCCTCTTCCCCCACACAGGTACCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000461999.1
ENST00000682404.1
ENST00000682517.1
ENST00000683955.1
CDS CCA 72 bp CAGGCAATCACCCCCACGAACCCACTTACTTCATGGTaGGGGAATGCCTTACACTGCTCCTTCACAAAGCAG +
Preference number: 6 (lower is better)
Translates to: QAITPTNPLTSW*GNALHCSFTKQ
Trigger: CTGCTTTGTGAAGGAGCAGTGTAAGGCATTCCCCCACCATGAAGTAAGTGGGTTCGTGGGGGTGATTGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000472016.1
ENST00000525456.5
ENST00000530052.2
ENST00000682404.1
ENST00000682517.1
ENST00000682652.1
ENST00000682665.1
ENST00000682691.1
ENST00000682883.1
ENST00000683955.1
ENST00000684252.1
ENST00000684315.1
ENST00000684499.1
CDS CCA 72 bp CCACAGGCAATCACCCCCACGAACCCACTTACTTCATaGTGGGGGAATGCCTTACACTGCTCCTTCACAAAG +
Preference number: 6 (lower is better)
Translates to: PQAITPTNPLTS*WGNALHCSFTK
Trigger: CTTTGTGAAGGAGCAGTGTAAGGCATTCCCCCACCATGAAGTAAGTGGGTTCGTGGGGGTGATTGCCTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000472016.1
ENST00000525456.5
ENST00000530052.2
ENST00000682404.1
ENST00000682517.1
ENST00000682652.1
ENST00000682665.1
ENST00000682691.1
ENST00000682883.1
ENST00000683955.1
ENST00000684252.1
ENST00000684315.1
ENST00000684499.1
CDS GCA 72 bp AGGGCCACAAATTCATGGTGGGGGAATGCCTTACACTaGTCCTTCACAAAGCAGTTCAGGAAGGGGAAAGGG +
Preference number: 6 (lower is better)
Translates to: RATNSWWGNALH*SFTKQFRKGKG
Trigger: CCCTTTCCCCTTCCTGAACTGCTTTGTGAAGGAGCAGTGTAAGGCATTCCCCCACCATGAATTTGTGGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354202.9
ENST00000409993.6
ENST00000445653.6
ENST00000460183.1
ENST00000682191.1
ENST00000682192.1
ENST00000682326.1
ENST00000682811.1
ENST00000682946.1
ENST00000683373.1
ENST00000683558.1
ENST00000683567.1
CDS GCA 72 bp CACCCCCACGAACCCACTTACTTCATGGTGGGGGAATaGCTTACACTGCTCCTTCACAAAGCAGTTCAGGAA +
Preference number: 6 (lower is better)
Translates to: HPHEPTYFMVGE*LTLLLHKAVQE
Trigger: TTCCTGAACTGCTTTGTGAAGGAGCAGTGTAAGGCATTCCCCCACCATGAAGTAAGTGGGTTCGTGGGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000472016.1
ENST00000525456.5
ENST00000530052.2
ENST00000682404.1
ENST00000682517.1
ENST00000682652.1
ENST00000682665.1
ENST00000682691.1
ENST00000682883.1
ENST00000683955.1
ENST00000684252.1
ENST00000684315.1
ENST00000684499.1
CDS GCA 72 bp AGCAGATGGCAAGGAGGGCACTTCATGGTGGGGGAATaGCTTACACTGCTCCTTCACAAAGCAGTTCAGGAA +
Preference number: 6 (lower is better)
Translates to: SRWQGGHFMVGE*LTLLLHKAVQE
Trigger: TTCCTGAACTGCTTTGTGAAGGAGCAGTGTAAGGCATTCCCCCACCATGAAGTGCCCTCCTTGCCATCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000640747.1
ENST00000684142.1
ENST00000684345.1
CDS CAA 90 bp ACTGGACTAGCCCTGACCCTAGTTCTGACTCAGAGGAGACTCCAGTaGTGCAGCAACTCTGCAGGATCCAAGGCCCTGAATTCATCTATT +
Preference number: 6 (lower is better)
Translates to: TGLALTLVLTQRRLQ*CSNSAGSKALNSSI
Trigger: AATAGATGAATTCAGGGCCTTGGATCCTGCAGAGTTGCTGCACAACTGGAGTCTCCTCTGAGTCAGAACTAGGGTCAGGGCTAGTCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000461999.1
ENST00000533687.1
ENST00000682404.1
ENST00000682517.1
ENST00000683955.1
CDS GCA 72 bp GGCACCTATCAGGGCCACAAATTCATGGTGGGGGAATaGCTTACACTGCTCCTTCACAAAGCAGTTCAGGAA +
Preference number: 6 (lower is better)
Translates to: GTYQGHKFMVGE*LTLLLHKAVQE
Trigger: TTCCTGAACTGCTTTGTGAAGGAGCAGTGTAAGGCATTCCCCCACCATGAATTTGTGGCCCTGATAGGTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354202.9
ENST00000409993.6
ENST00000445653.6
ENST00000460183.1
ENST00000682191.1
ENST00000682192.1
ENST00000682326.1
ENST00000682811.1
ENST00000682946.1
ENST00000683373.1
ENST00000683558.1
ENST00000683567.1
CDS GCA 72 bp ATGACTCAAGCTTCATGGTGGGGGAATGCCTTACACTaGTCCTTCACAAAGCAGTTCAGGAAGGGGAAAGGG +
Preference number: 6 (lower is better)
Translates to: MTQASWWGNALH*SFTKQFRKGKG
Trigger: CCCTTTCCCCTTCCTGAACTGCTTTGTGAAGGAGCAGTGTAAGGCATTCCCCCACCATGAAGCTTGAGTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414373.5
CDS GCA 72 bp GTACAGGATTCTTCATGGTGGGGGAATGCCTTACACTaGTCCTTCACAAAGCAGTTCAGGAAGGGGAAAGGG +
Preference number: 6 (lower is better)
Translates to: VQDSSWWGNALH*SFTKQFRKGKG
Trigger: CCCTTTCCCCTTCCTGAACTGCTTTGTGAAGGAGCAGTGTAAGGCATTCCCCCACCATGAAGAATCCTGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481084.5
CDS GCA 72 bp AACCCACTTACTTCATGGTGGGGGAATGCCTTACACTaGTCCTTCACAAAGCAGTTCAGGAAGGGGAAAGGG +
Preference number: 6 (lower is better)
Translates to: NPLTSWWGNALH*SFTKQFRKGKG
Trigger: CCCTTTCCCCTTCCTGAACTGCTTTGTGAAGGAGCAGTGTAAGGCATTCCCCCACCATGAAGTAAGTGGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000472016.1
ENST00000525456.5
ENST00000530052.2
ENST00000682404.1
ENST00000682517.1
ENST00000682652.1
ENST00000682665.1
ENST00000682691.1
ENST00000682883.1
ENST00000683955.1
ENST00000684252.1
ENST00000684315.1
ENST00000684499.1
CDS CCA 72 bp AGGATGATAAGGAAAACAGCACCGCTGATCACTCCCTaGGATTCTGGGATCTGCTGTCGGCTGGTTTTGTTG +
Preference number: 6 (lower is better)
Translates to: RMIRKTAPLITP*DSGICCRLVLL
Trigger: CAACAAAACCAGCCGACAGCAGATCCCAGAATCCCAGGGAGTGATCAGCGGTGCTGTTTTCCTTATCATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 20 transcripts:
ENST00000354202.9
ENST00000409993.6
ENST00000414373.5
ENST00000445653.6
ENST00000472016.1
ENST00000639704.1
ENST00000640747.1
ENST00000682191.1
ENST00000682192.1
ENST00000682326.1
ENST00000682665.1
ENST00000682691.1
ENST00000682811.1
ENST00000682946.1
ENST00000683373.1
ENST00000683558.1
ENST00000683955.1
ENST00000684142.1
ENST00000684252.1
ENST00000684345.1
CDS CCA 72 bp AAGGTGATGGCACTGCCCAGGATCTGCAAGGAGAAATaGACTGGAGTAAGAATCACGCAGAAAGGGAGACAC +
Preference number: 6 (lower is better)
Translates to: KVMALPRICKEK*TGVRITQKGRH
Trigger: GTGTCTCCCTTTCTGCGTGATTCTTACTCCAGTCCATTTCTCCTTGCAGATCCTGGGCAGTGCCATCACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000461999.1
ENST00000524658.2
ENST00000530052.2
ENST00000682191.1
ENST00000682192.1
ENST00000682404.1
ENST00000682652.1
ENST00000682665.1
ENST00000682883.1
ENST00000683558.1
ENST00000684252.1
ENST00000684315.1
ENST00000684682.1
CDS CAA 72 bp AAATGCCAATTGCCCGGTTCCAAGATGAATGCCTCCTaGTACCACGTGTCTGACACCGCTCACATTCCGGTT +
Preference number: 6 (lower is better)
Translates to: KCQLPGSKMNAS*YHVSDTAHIPV
Trigger: AACCGGAATGTGAGCGGTGTCAGACACGTGGTACAAGGAGGCATTCATCTTGGAACCGGGCAATTGGCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409993.6
CDS TCA 72 bp AGAAGAGTCGAACGAGCTGATATCGAATGGAGAAGGTaGTGGCACTGCCCAGGATCTGCAAGGAGAAATGGA +
Preference number: 6 (lower is better)
Translates to: RRVERADIEWRR*WHCPGSARRNG
Trigger: TCCATTTCTCCTTGCAGATCCTGGGCAGTGCCATCACCTTCTCCATTCGATATCAGCTCGTTCGACTCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000461999.1
ENST00000524658.2
ENST00000530052.2
ENST00000682191.1
ENST00000682192.1
ENST00000682404.1
ENST00000682652.1
ENST00000682665.1
ENST00000682883.1
ENST00000683558.1
ENST00000684252.1
ENST00000684315.1
ENST00000684682.1
CDS GCA 72 bp CGACCAACTGAAGACGCAGAAAACTCCATAGAGGTATaGGCAGGTTTAGCTTCACCACCACAAGGTGGGTTA +
Preference number: 6 (lower is better)
Translates to: RPTEDAENSIEV*AGLASPPQGGL
Trigger: TAACCCACCTTGTGGTGGTGAAGCTAAACCTGCGCATACCTCTATGGAGTTTTCTGCGTCTTCAGTTGGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461999.1
ENST00000533687.1
ENST00000682404.1
ENST00000682517.1
ENST00000683955.1
CDS CCA 72 bp TGGGAGAGGGTGAAAGAAAGTAGTTTTGCTCTGGACTaGGTGCTGTTAGAAAGCAGGAGTAATTCATGGCCG +
Preference number: 6 (lower is better)
Translates to: WERVKESSFALD*VLLESRSNSWP
Trigger: CGGCCATGAATTACTCCTGCTTTCTAACAGCACCCAGTCCAGAGCAAAACTACTTTCTTTCACCCTCTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524658.2
CDS CAA 72 bp GTTATAAAGGGCTACTCACATGGAAATAGCCCTTCTTaGGGCCCACTCCCTTTGCACAGCAAATGTATAGGC +
Preference number: 6 (lower is better)
Translates to: VIKGYSHGNSPS*GPLPLHSKCIG
Trigger: GCCTATACATTTGCTGTGCAAAGGGAGTGGGCCCAAAGAAGGGCTATTTCCATGTGAGTAGCCCTTTATAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000461999.1
ENST00000530052.2
ENST00000682191.1
ENST00000682517.1
ENST00000682652.1
ENST00000682665.1
ENST00000682691.1
ENST00000683373.1
ENST00000683558.1
ENST00000684345.1
ENST00000684682.1
CDS CAA 90 bp TTAATGACTTGTTGTAAAAAGGGAGACTTCAGAAACCACACACCATaGGGAACCACGGAATGTCTCAGTAAGAGGGTGTTAGGAGGGGCT +
Preference number: 6 (lower is better)
Translates to: LMTCCKKGDFRNHTP*GTTECLSKRVLGGA
Trigger: AGCCCCTCCTAACACCCTCTTACTGAGACATTCCGTGGTTCCCAATGGTGTGTGGTTTCTGAAGTCTCCCTTTTTACAACAAGTCATTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524658.2
CDS TCA 72 bp CTACTGGGTAGAGAGAAATTTCAGAATACGACCAACTaGAGACGCAGAAAACTCCATAGAGGTATGCGCAGG +
Preference number: 6 (lower is better)
Translates to: LLGREKFQNTTN*RRRKLHRGMRR
Trigger: CCTGCGCATACCTCTATGGAGTTTTCTGCGTCTTCAGTTGGTCGTATTCTGAAATTTCTCTCTACCCAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461999.1
ENST00000533687.1
ENST00000682404.1
ENST00000682517.1
ENST00000683955.1
CDS TCA 72 bp TGGATCTATTTAATGCTTTCAAGTTCCCCTTGGATCTaGTGTAGGACTAGGTTCCCCATTCCTCAAGGTCAG +
Preference number: 6 (lower is better)
Translates to: WIYLMLSSSPWI*CRTRFPIPQGQ
Trigger: CTGACCTTGAGGAATGGGGAACCTAGTCCTACATCAGATCCAAGGGGAACTTGAAAGCATTAAATAGATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000445653.6
ENST00000461999.1
ENST00000524658.2
ENST00000525456.5
ENST00000530052.2
ENST00000682192.1
ENST00000682404.1
ENST00000682517.1
ENST00000682665.1
ENST00000682691.1
ENST00000683558.1
ENST00000684142.1
ENST00000684252.1
ENST00000684255.1
ENST00000684345.1
ENST00000684499.1
ENST00000684682.1
CDS CCA 72 bp GTTCCCATGCCAGGAAACAGGATAACTTCAATTTTGTaGCCCTCCATGCCACCTCTAGTATCAGGATTTAAA +
Preference number: 6 (lower is better)
Translates to: VPMPGNRITSIL*PSMPPLVSGFK
Trigger: TTTAAATCCTGATACTAGAGGTGGCATGGAGGGCCACAAAATTGAAGTTATCCTGTTTCCTGGCATGGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682232.1
CDS CAA 72 bp TGTTGTAAAAAGGGAGACTTCAGAAACCACACACCATaGGGAACCACGGAATGTCTCAGTAAGAGGGTGTTA +
Preference number: 6 (lower is better)
Translates to: CCKKGDFRNHTP*GTTECLSKRVL
Trigger: TAACACCCTCTTACTGAGACATTCCGTGGTTCCCAATGGTGTGTGGTTTCTGAAGTCTCCCTTTTTACAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524658.2
CDS CAA 72 bp TTTGTTCCCATGCCAGGAAACAGGATAACTTCAATTTaGTGGCCCTCCATGCCACCTCTAGTATCAGGATTT +
Preference number: 6 (lower is better)
Translates to: FVPMPGNRITSI*WPSMPPLVSGF
Trigger: AAATCCTGATACTAGAGGTGGCATGGAGGGCCACAAAATTGAAGTTATCCTGTTTCCTGGCATGGGAACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682232.1
CDS CAA 72 bp GTTTGGATACCAACTTTACTTCTTAGCTTTGTGACCTaGATCTTGATCATGACACATTTAACTTCTCTAAGC +
Preference number: 6 (lower is better)
Translates to: VWIPTLLLSFVT*ILIMTHLTSLS
Trigger: GCTTAGAGAAGTTAAATGTGTCATGATCAAGATCAAGGTCACAAAGCTAAGAAGTAAAGTTGGTATCCAAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524658.2
CDS CAA 72 bp ATACCAACTTTACTTCTTAGCTTTGTGACCTTGATCTaGATCATGACACATTTAACTTCTCTAAGCCTGTTT +
Preference number: 6 (lower is better)
Translates to: IPTLLLSFVTLI*IMTHLTSLSLF
Trigger: AAACAGGCTTAGAGAAGTTAAATGTGTCATGATCAAGATCAAGGTCACAAAGCTAAGAAGTAAAGTTGGTAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524658.2