RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DOT1L (Homo sapiens)

Ensembl gene IDs: ENSG00000104885

Ensembl transcript IDs: ENST00000398665.8, ENST00000446286.1, ENST00000452696.5, ENST00000457590.2, ENST00000478937.3, ENST00000482433.1, ENST00000586024.1, ENST00000591498.1, ENST00000608122.1

Found 889 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCAGGCCGCGGGGAGGCCTCCGAGGAATGTGGTGGCGACGGGCCTaGCTTTGGTACGGGAGCAGCGCGTCGGGGGAGCCGGCCGGGCGG +
Preference number: 1 (lower is better)
Translates to: LRPRGGLRGMWWRRA*LWYGSSASGEPAGR
Trigger: CCGCCCGGCCGGCTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCACATTCCTCGGAGGCCTCCCCGCGGCCTGAG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR CCA 90 bp CCGCGGGGAGGCCTCCGAGGAATGTGGTGGCGACGGGCCTGCCTTTaGTACGGGAGCAGCGCGTCGGGGGAGCCGGCCGGGCGGCGTTTC +
Preference number: 1 (lower is better)
Translates to: PRGGLRGMWWRRACL*YGSSASGEPAGRRF
Trigger: GAAACGCCGCCCGGCCGGCTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCACATTCCTCGGAGGCCTCCCCGCGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR CCA 90 bp TTCACAGTGGAGCTCCCGTCCGTCCTTGCCTCTGCCGTCCAGGGGTaGGAGCCCGGCAGGCCGGCGGGCACCATGCCGCGGGCGCGAGTT +
Preference number: 1 (lower is better)
Translates to: FTVELPSVLASAVQG*EPGRPAGTMPRARV
Trigger: AACTCGCGCCCGCGGCATGGTGCCCGCCGGCCTGCCGGGCTCCCACCCCTGGACGGCAGAGGCAAGGACGGACGGGAGCTCCACTGTGAA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR CCA 90 bp GCGCTCAGGAAGGGGCTCAGGCCGCGGGGAGGCCTCCGAGGAATGTaGTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGG +
Preference number: 1 (lower is better)
Translates to: ALRKGLRPRGGLRGM*WRRACLWYGSSASG
Trigger: CCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCACATTCCTCGGAGGCCTCCCCGCGGCCTGAGCCCCTTCCTGAGCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR TCA 90 bp AGGCTCGCCTGGGCCACACACGTGAGGGAGCAGCTCGGGAGCACGTaGGTGGTGCTTCCCGACGTCCGTCAGCCGCCCGTGAGAGCCCGC +
Preference number: 1 (lower is better)
Translates to: RLAWATHVREQLGST*VVLPDVRQPPVRAR
Trigger: GCGGGCTCTCACGGGCGGCTGACGGACGTCGGGAAGCACCACTCACGTGCTCCCGAGCTGCTCCCTCACGTGTGTGGCCCAGGCGAGCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586024.1
3UTR CCA 90 bp CTGGACCAGTCCCAGCCTCCTGCGGCGCGTGCCGCCGATTCACAGTaGAGCTCCCGTCCGTCCTTGCCTCTGCCGTCCAGGGGTGGGAGC +
Preference number: 1 (lower is better)
Translates to: LDQSQPPAARAADSQ*SSRPSLPLPSRGGS
Trigger: GCTCCCACCCCTGGACGGCAGAGGCAAGGACGGACGGGAGCTCCACTGTGAATCGGCGGCACGCGCCGCAGGAGGCTGGGACTGGTCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR CCA 90 bp CTCTCCTTCCACACCCAGTCCCAGGCACCCGCCAAGGCTGCAGAGTaGGGGGCCGACGTCACCCTGGGGCCTAGGGCCAGAGAGGCCAGG +
Preference number: 1 (lower is better)
Translates to: LSFHTQSQAPAKAAE*GADVTLGPRAREAR
Trigger: CCTGGCCTCTCTGGCCCTAGGCCCCAGGGTGACGTCGGCCCCCCACTCTGCAGCCTTGGCGGGTGCCTGGGACTGGGTGTGGAAGGAGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398665.8
3UTR GCA 90 bp TGCCCGCGCCGTCCTCACAGCACCATCGCGCAGCACATGGCCAGCTaGGTCACCGCGCAGGCCCCTTCACATGCAAGGGCGCAACCCACG +
Preference number: 1 (lower is better)
Translates to: CPRRPHSTIAQHMAS*VTAQAPSHARAQPT
Trigger: CGTGGGTTGCGCCCTTGCATGTGAAGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGTGCTGTGAGGACGGCGCGGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR TCA 90 bp TCGGGAGCACGTGAGTGGTGCTTCCCGACGTCCGTCAGCCGCCCGTaGGAGCCCGCCTCCGGGGACAGCCTTGCAGCAACGGTTTGGTGC +
Preference number: 1 (lower is better)
Translates to: SGAREWCFPTSVSRP*EPASGDSLAATVWC
Trigger: GCACCAAACCGTTGCTGCAAGGCTGTCCCCGGAGGCGGGCTCTCACGGGCGGCTGACGGACGTCGGGAAGCACCACTCACGTGCTCCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586024.1
3UTR GCA 90 bp CCCGCCCACCCACAGTCAGCAGCAGCAGCACAGGTCCCCGCCAGCTaGCCACGGAAACTCAGGCCAGGTGCCAGCACCAGGCTCCAGATC +
Preference number: 1 (lower is better)
Translates to: PAHPQSAAAAQVPAS*PRKLRPGASTRLQI
Trigger: GATCTGGAGCCTGGTGCTGGCACCTGGCCTGAGTTTCCGTGGGCAGCTGGCGGGGACCTGTGCTGCTGCTGCTGACTGTGGGTGGGCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
3UTR CCA 90 bp CCCTGGGGCCTAGGGCCAGAGAGGCCAGGTTTCAGCAGTGCACCCTaGCCCCAGCACACCCACAGCAGCTGGGAGAACCAGCACAGGCTC +
Preference number: 1 (lower is better)
Translates to: PWGLGPERPGFSSAP*PQHTHSSWENQHRL
Trigger: GAGCCTGTGCTGGTTCTCCCAGCTGCTGTGGGTGTGCTGGGGCCAGGGTGCACTGCTGAAACCTGGCCTCTCTGGCCCTAGGCCCCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
3UTR CCA 90 bp GGCAGGCACAGAGCGTGTGGCCTGGAAGTGCACAGGAGCCGGGCATaGCGGGCGACACTCACCGCTCCCCAAGTCCACAAACAGGTCGTC +
Preference number: 1 (lower is better)
Translates to: GRHRACGLEVHRSRA*RATLTAPQVHKQVV
Trigger: GACGACCTGTTTGTGGACTTGGGGAGCGGTGAGTGTCGCCCGCCATGCCCGGCTCCTGTGCACTTCCAGGCCACACGCTCTGTGCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478937.3
3UTR TCA 90 bp TCCAGGGAGGGCACAGAGCCACCACTGCTCAGACAACCCAGGCCCTaGCTGCTCAGGGCTCCAGAAGCACTGGAGTGGCCCTGCCTGCCT +
Preference number: 1 (lower is better)
Translates to: SREGTEPPLLRQPRP*LLRAPEALEWPCLP
Trigger: AGGCAGGCAGGGCCACTCCAGTGCTTCTGGAGCCCTGAGCAGTCAGGGCCTGGGTTGTCTGAGCAGTGGTGGCTCTGTGCCCTCCCTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
3UTR GCA 90 bp GGGAGGGCACAGAGCCACCACTGCTCAGACAACCCAGGCCCTGACTaGTCAGGGCTCCAGAAGCACTGGAGTGGCCCTGCCTGCCTGCTA +
Preference number: 1 (lower is better)
Translates to: GRAQSHHCSDNPGPD*SGLQKHWSGPACLL
Trigger: TAGCAGGCAGGCAGGGCCACTCCAGTGCTTCTGGAGCCCTGAGCAGTCAGGGCCTGGGTTGTCTGAGCAGTGGTGGCTCTGTGCCCTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
3UTR GCA 90 bp CTTGAGAAGGTGGGCTCAGCAAGTGCCACACAGCCCAGGGCCAGATaGGGGGAGCTCAGACTCCCAGATCCCATCCTCCAGGGAGGGCAC +
Preference number: 1 (lower is better)
Translates to: LEKVGSASATQPRAR*GELRLPDPILQGGH
Trigger: GTGCCCTCCCTGGAGGATGGGATCTGGGAGTCTGAGCTCCCCGCATCTGGCCCTGGGCTGTGTGGCACTTGCTGAGCCCACCTTCTCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398665.8
3UTR CCA 90 bp GAACACAGGGCTGGCAGCTCCCTGGAGGGTGGATCTGTGGCACCTTaGGGAAGGGGCTCCCCGATGCCATCTCACAGGAGCAAGCACTTG +
Preference number: 1 (lower is better)
Translates to: EHRAGSSLEGGSVAP*GRGSPMPSHRSKHL
Trigger: CAAGTGCTTGCTCCTGTGAGATGGCATCGGGGAGCCCCTTCCCCAAGGTGCCACAGATCCACCCTCCAGGGAGCTGCCAGCCCTGTGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
3UTR CCA 90 bp TCTTGTTCTAGACCAGGGACTCGGCCGTCTCTGCCATCAACCCTGTaGCGTATCCGGCCCGTGGCGACACAGAGCAGGCTGCCTGTCCTG +
Preference number: 1 (lower is better)
Translates to: SCSRPGTRPSLPSTL*RIRPVATQSRLPVL
Trigger: CAGGACAGGCAGCCTGCTCTGTGTCGCCACGGGCCGGATACGCCACAGGGTTGATGGCAGAGACGGCCGAGTCCCTGGTCTAGAACAAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
3UTR GCA 90 bp GTGACTCTCTCCTGTACAGAAACACCAAGGGACCCACGACAGGCCTaGCCCGCATCGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAA +
Preference number: 1 (lower is better)
Translates to: VTLSCTETPRDPRQA*PASQGMLRAMDSRE
Trigger: TTCTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGATGCGGGGCAGGCCTGTCGTGGGTCCCTTGGTGTTTCTGTACAGGAGAGAGTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR TCA 90 bp AGCCTTTCCTCCGTGGCTCCCTTTGGAGGCCACGTGGTAGGGATGTaGCGTGTGTCCATCCTGCCCTTGGGAACCAGAACACAGGGCTGG +
Preference number: 1 (lower is better)
Translates to: SLSSVAPFGGHVVGM*RVSILPLGTRTQGW
Trigger: CCAGCCCTGTGTTCTGGTTCCCAAGGGCAGGATGGACACACGTCACATCCCTACCACGTGGCCTCCAAAGGGAGCCACGGAGGAAAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
3UTR TCA 90 bp GGCCGAGGAGGGGGTATCCTAGTTTTTAGGGTTCCTATCAATTCCTaGGCAAGAGCCACTCCCAGGCGCCGCCCGCCCACCCACAGTCAG +
Preference number: 1 (lower is better)
Translates to: GRGGGILVFRVPINS*ARATPRRRPPTHSQ
Trigger: CTGACTGTGGGTGGGCGGGCGGCGCCTGGGAGTGGCTCTTGCTCAGGAATTGATAGGAACCCTAAAAACTAGGATACCCCCTCCTCGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000398665.8
3UTR GCA 90 bp CCGGCGGGCACCATGCCGCGGGCGCGAGTTGGTCCACACCGTCCTTaGATAGGTCTCGCGGTTGAGGTAGAAATCCTAGTTACCTTACAC +
Preference number: 1 (lower is better)
Translates to: PAGTMPRARVGPHRP*IGLAVEVEILVTLH
Trigger: GTGTAAGGTAACTAGGATTTCTACCTCAACCGCGAGACCTATGCAAGGACGGTGTGGACCAACTCGCGCCCGCGGCATGGTGCCCGCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457590.2
3UTR TCA 90 bp TCCGCAGGCAGCCACCACACTAGTTCACGTGTGGTGACACGCATATaGCCCAGTGGGCTCAAGGAGACTTCTGCCTGGGCCAGTGGCTCT +
Preference number: 1 (lower is better)
Translates to: SAGSHHTSSRVVTRI*PSGLKETSAWASGS
Trigger: AGAGCCACTGGCCCAGGCAGAAGTCTCCTTGAGCCCACTGGGTCATATGCGTGTCACCACACGTGAACTAGTGTGGTGGCTGCCTGCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
3UTR TCA 90 bp ACAGGAGGGTGTCCGCAGGCAGCCACCACACTAGTTCACGTGTGGTaGCACGCATATGACCCAGTGGGCTCAAGGAGACTTCTGCCTGGG +
Preference number: 1 (lower is better)
Translates to: TGGCPQAATTLVHVW*HAYDPVGSRRLLPG
Trigger: CCCAGGCAGAAGTCTCCTTGAGCCCACTGGGTCATATGCGTGTCACCACACGTGAACTAGTGTGGTGGCTGCCTGCGGACACCCTCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
3UTR CCA 90 bp CAGCACCTTCTAGCTGAGAGCACCAACGTGGGGTGGGGAGGGCACTaGGCACCACTTAAGAGGACAGGTCCGGAGCACCATCTTCAGAAC +
Preference number: 1 (lower is better)
Translates to: QHLLAESTNVGWGGH*APLKRTGPEHHLQN
Trigger: GTTCTGAAGATGGTGCTCCGGACCTGTCCTCTTAAGTGGTGCCCAGTGCCCTCCCCACCCCACGTTGGTGCTCTCAGCTAGAAGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
3UTR GCA 90 bp CACCAAGGGACCCACGACAGGCCTGCCCCGCATCGCAGGGCATGCTaGGAGCCATGGACAGCCGAGAAATACAAAAGTAAATGCACTTGT +
Preference number: 1 (lower is better)
Translates to: HQGTHDRPAPHRRAC*EPWTAEKYKSKCTC
Trigger: ACAAGTGCATTTACTTTTGTATTTCTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGATGCGGGGCAGGCCTGTCGTGGGTCCCTTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR CCA 90 bp TCCACAAACAGGTCGTCGTCGGTCATCTTGATCTCATCAATCATCTaGGCCACCAGGTCGAAGGAGGTCTCCCCGTACACCTCGGGGGAG +
Preference number: 1 (lower is better)
Translates to: STNRSSSVILISSII*ATRSKEVSPYTSGE
Trigger: CTCCCCCGAGGTGTACGGGGAGACCTCCTTCGACCTGGTGGCCCAGATGATTGATGAGATCAAGATGACCGACGACGACCTGTTTGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478937.3
3UTR TCA 90 bp ACTCACCGCTCCCCAAGTCCACAAACAGGTCGTCGTCGGTCATCTTaGTCTCATCAATCATCTGGGCCACCAGGTCGAAGGAGGTCTCCC +
Preference number: 1 (lower is better)
Translates to: THRSPSPQTGRRRSS*SHQSSGPPGRRRSP
Trigger: GGGAGACCTCCTTCGACCTGGTGGCCCAGATGATTGATGAGATCAAGATGACCGACGACGACCTGTTTGTGGACTTGGGGAGCGGTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478937.3
3UTR GCA 90 bp CCATGGACAGCCGAGAAATACAAAAGTAAATGCACTTGTTCAACGTaGCCGCGCCGTCCTCACAGCACCATCGCGCAGCACATGGCCAGC +
Preference number: 1 (lower is better)
Translates to: PWTAEKYKSKCTCST*PRRPHSTIAQHMAS
Trigger: GCTGGCCATGTGCTGCGCGATGGTGCTGTGAGGACGGCGCGGGCACGTTGAACAAGTGCATTTACTTTTGTATTTCTCGGCTGTCCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR GCA 90 bp AAACACCAAGGGACCCACGACAGGCCTGCCCCGCATCGCAGGGCATaGTGCGAGCCATGGACAGCCGAGAAATACAAAAGTAAATGCACT +
Preference number: 1 (lower is better)
Translates to: KHQGTHDRPAPHRRA*CEPWTAEKYKSKCT
Trigger: AGTGCATTTACTTTTGTATTTCTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGATGCGGGGCAGGCCTGTCGTGGGTCCCTTGGTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR CCA 90 bp ACCCACGACAGGCCTGCCCCGCATCGCAGGGCATGCTGCGAGCCATaGACAGCCGAGAAATACAAAAGTAAATGCACTTGTTCAACGTGC +
Preference number: 1 (lower is better)
Translates to: THDRPAPHRRACCEP*TAEKYKSKCTCSTC
Trigger: GCACGTTGAACAAGTGCATTTACTTTTGTATTTCTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGATGCGGGGCAGGCCTGTCGTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR GCA 90 bp ATAGCACCGGGGCAGGCTGTGGCGAATCCGCTGGCGGGCCCGCCCTaGAGACACGTGTCTTTATATAGAGCTCTCATATATAGATATTTA +
Preference number: 1 (lower is better)
Translates to: IAPGQAVANPLAGPP*RHVSLYRALIYRYL
Trigger: TAAATATCTATATATGAGAGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATTCGCCACAGCCTGCCCCGGTGCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR TCA 90 bp ATAAATTCTCATCACATCTCTATAAAATACTGCCACTCATTAGTGTaGCTCTCTCCTGTACAGAAACACCAAGGGACCCACGACAGGCCT +
Preference number: 1 (lower is better)
Translates to: INSHHISIKYCHSLV*LSPVQKHQGTHDRP
Trigger: AGGCCTGTCGTGGGTCCCTTGGTGTTTCTGTACAGGAGAGAGTCACACTAATGAGTGGCAGTATTTTATAGAGATGTGATGAGAATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR CAA 90 bp GCCGCGGGGAGGCCTCCGAGGAATGTGGTGGCGACGGGCCTGCCTTaGGTACGGGAGCAGCGCGTCGGGGGAGCCGGCCGGGCGGCGTTT +
Preference number: 2 (lower is better)
Translates to: AAGRPPRNVVATGLP*VREQRVGGAGRAAF
Trigger: AAACGCCGCCCGGCCGGCTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCACATTCCTCGGAGGCCTCCCCGCGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR-3UTR GCA 90 bp CGTCACCGCGCAGGCCCCTTCACATGCAAGGGCGCAACCCACGCCCCGGAGGGTGTCCGTCCTTGCCTCTaGCGTCCAGGGGTGGGAGCC +
Preference number: 2 (lower is better)
Translates to: RHRAGPFTCKGATHAPEGVRPCL*RPGVGA
Trigger: GGCTCCCACCCCTGGACGGCAGAGGCAAGGACGGAC...ACCCTCCGGGGCGTGGGTTGCGCCCTTGCATGTGAAGGGGCCTGCGCGGTGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR-3UTR CCA 90 bp AGGCAGGGGCGCCGGCAGCTCTGTCTGGGCTGCTGGGAGCTGCAACTGAGGGGTAGGCAGGCGCGGGCCTaGGGACGAGATAGCACCGGG +
Preference number: 2 (lower is better)
Translates to: RQGRRQLCLGCWELQLRGRQARA*GRDSTG
Trigger: CCCGGTGCTATCTCGTCCCCAGGCCCGCGCCTGCCT...ACCCCTCAGTTGCAGCTCCCAGCAGCCCAGACAGAGCTGCCGGCGCCCCTGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
3UTR-3UTR GCA 90 bp CGTCACCGCGCAGGCCCCTTCACATGCAAGGGCGCAACCCACGCCCCGGAGGGTTGGTGGCGACGGGCCTaGCTTTGGTACGGGAGCAGC +
Preference number: 2 (lower is better)
Translates to: RHRAGPFTCKGATHAPEGWWRRA*LWYGSS
Trigger: GCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCA...ACCCTCCGGGGCGTGGGTTGCGCCCTTGCATGTGAAGGGGCCTGCGCGGTGACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR-3UTR GCA 90 bp CACAGGTCCCCGCCAGCTGCCCACGGAAACTCAGGCCAGGTGCCAGCACCAGGCGTGGCCCTGCCTGCCTaGTACACCCCGGCCTCAGCT +
Preference number: 2 (lower is better)
Translates to: HRSPPAAHGNSGQVPAPGVALPA*YTPASA
Trigger: AGCTGAGGCCGGGGTGTAGCAGGCAGGCAGGGCCAC...GCCTGGTGCTGGCACCTGGCCTGAGTTTCCGTGGGCAGCTGGCGGGGACCTGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
3UTR-3UTR CCA 90 bp CCTCCGAGGAATGTGGTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCTCAGCACCAAGCGGGTaGAGGCAGGCGCGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: PPRNVVATGLPLVREQRVSAPSG*RQARAW
Trigger: CCAGGCCCGCGCCTGCCTCCACCCGCTTGGTGCTGA...GACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCACATTCCTCGGAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR-3UTR TCA 90 bp ACCCAAATATGCTCTTCCCGAGGGCTCTACTCCAGGCAGACCCACAGGGCCCGGTCCGTCAGCCGCCCGTaGGAGCCCGCCTCCGGGGAC +
Preference number: 2 (lower is better)
Translates to: TQICSSRGLYSRQTHRARSVSRP*EPASGD
Trigger: GTCCCCGGAGGCGGGCTCTCACGGGCGGCTGACGGA...CCGGGCCCTGTGGGTCTGCCTGGAGTAGAGCCCTCGGGAAGAGCATATTTGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586024.1
3UTR-3UTR GCA 90 bp GCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGCAAGGGCGCAGCTCCCGTCCGTCCTTaGCTCTGCCGTCCAGGGGTG +
Preference number: 2 (lower is better)
Translates to: AAHGQLRHRAGPFTCKGAAPVRP*LCRPGV
Trigger: CACCCCTGGACGGCAGAGGCAAGGACGGACGGGAGC...TGCGCCCTTGCATGTGAAGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR-3UTR CCA 90 bp GTCCTCACAGCACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCGCCGCGGGCGCGAGTTaGTCCACACCGTCCTTGCAT +
Preference number: 2 (lower is better)
Translates to: VLTAPSRSTWPAASPRRPAAGAS*STPSLH
Trigger: ATGCAAGGACGGTGTGGACCAACTCGCGCCCGCGGC...GGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGTGCTGTGAGGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR-3UTR CCA 90 bp ATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGCAAGGTCAGCACCAAGCGGGTaGAGGCAGGCGCGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: IAQHMASCVTAQAPSHARSAPSG*RQARAW
Trigger: CCAGGCCCGCGCCTGCCTCCACCCGCTTGGTGCTGA...CCTTGCATGTGAAGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR-3UTR GCA 90 bp GGCAGGCGCGGGCCTGGGGACGAGATAGCACCGGGGCAGGCTGTGGCGAATCCGGGTCCACACCGTCCTTaGATAGGTCTCGCGGTTGAG +
Preference number: 2 (lower is better)
Translates to: GRRGPGDEIAPGQAVANPGPHRP*IGLAVE
Trigger: CTCAACCGCGAGACCTATGCAAGGACGGTGTGGACC...CGGATTCGCCACAGCCTGCCCCGGTGCTATCTCGTCCCCAGGCCCGCGCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR-3UTR CCA 90 bp CCAGGGCCAGATGCGGGGAGCTCAGACTCCCAGATCCCATCCTCCAGGGAGGGCGCCGCGGGCGCGAGTTaGTCCACACCGTCCTTGCAT +
Preference number: 2 (lower is better)
Translates to: PGPDAGSSDSQIPSSREGAAGAS*STPSLH
Trigger: ATGCAAGGACGGTGTGGACCAACTCGCGCCCGCGGC...GCCCTCCCTGGAGGATGGGATCTGGGAGTCTGAGCTCCCCGCATCTGGCCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
3UTR-3UTR TCA 90 bp CACAGGTCCCCGCCAGCTGCCCACGGAAACTCAGGCCAGGTGCCAGCACCAGGCAGACAACCCAGGCCCTaGCTGCTCAGGGCTCCAGAA +
Preference number: 2 (lower is better)
Translates to: HRSPPAAHGNSGQVPAPGRQPRP*LLRAPE
Trigger: TTCTGGAGCCCTGAGCAGTCAGGGCCTGGGTTGTCT...GCCTGGTGCTGGCACCTGGCCTGAGTTTCCGTGGGCAGCTGGCGGGGACCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
3UTR-3UTR CCA 90 bp GACCAGGGACTCGGCCGTCTCTGCCATCAACCCTGTGGCGTATCCGGCCCGTGGCTCCGAGGAATGTGGTaGCGACGGGCCTGCCTTTGG +
Preference number: 2 (lower is better)
Translates to: DQGLGRLCHQPCGVSGPWLRGMW*RRACLW
Trigger: CCAAAGGCAGGCCCGTCGCCACCACATTCCTCGGAG...CCACGGGCCGGATACGCCACAGGGTTGATGGCAGAGACGGCCGAGTCCCTGGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
3UTR-3UTR GCA 90 bp CGTGAGGGAGCAGCTCGGGAGCACGTGAGTGGTGCTTCCCGACGTCCGTCAGCCCTCCGGGGACAGCCTTaGAGCAACGGTTTGGTGCAG +
Preference number: 2 (lower is better)
Translates to: REGAAREHVSGASRRPSALRGQP*SNGLVQ
Trigger: CTGCACCAAACCGTTGCTGCAAGGCTGTCCCCGGAG...GGCTGACGGACGTCGGGAAGCACCACTCACGTGCTCCCGAGCTGCTCCCTCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586024.1
3UTR-3UTR CCA 90 bp ACAGGCCCAGGGCTCAGAACAGGAGGGTGTCCGCAGGCAGCCACCACACTAGTTCCATCGCGCAGCACATaGCCAGCTGCGTCACCGCGC +
Preference number: 2 (lower is better)
Translates to: TGPGLRTGGCPQAATTLVPSRST*PAASPR
Trigger: GCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGG...AACTAGTGTGGTGGCTGCCTGCGGACACCCTCCTGTTCTGAGCCCTGGGCCTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
3UTR-3UTR GCA 90 bp GTGGCGAATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTGTCCGTCCTTGCCTCTaGCGTCCAGGGGTGGGAGCC +
Preference number: 2 (lower is better)
Translates to: VANPLAGPPCRHVSLYRAVRPCL*RPGVGA
Trigger: GGCTCCCACCCCTGGACGGCAGAGGCAAGGACGGAC...AGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATTCGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR-3UTR CCA 90 bp CCAGTGGCTCTGAGACCCAGTGCGTGTCCTGAACATACGGTGGCCTGCGTGGGCGCCGCCGATTCACAGTaGAGCTCCCGTCCGTCCTTG +
Preference number: 2 (lower is better)
Translates to: PVALRPSACPEHTVACVGAADSQ*SSRPSL
Trigger: CAAGGACGGACGGGAGCTCCACTGTGAATCGGCGGC...GCCCACGCAGGCCACCGTATGTTCAGGACACGCACTGGGTCTCAGAGCCACTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
3UTR-3UTR CCA 90 bp GCCCCGCATCGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAAATACAAAAGTAGGCAGGCGCGGGCCTaGGGACGAGATAGCACCGGG +
Preference number: 2 (lower is better)
Translates to: APHRRACCEPWTAEKYKSRQARA*GRDSTG
Trigger: CCCGGTGCTATCTCGTCCCCAGGCCCGCGCCTGCCT...ACTTTTGTATTTCTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGATGCGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR-3UTR CCA 90 bp ACAGTCAGCAGCAGCAGCACAGGTCCCCGCCAGCTGCCCACGGAAACTCAGGCCCTCCGTGGCTCCCTTTaGAGGCCACGTGGTAGGGAT +
Preference number: 2 (lower is better)
Translates to: TVSSSSTGPRQLPTETQALRGSL*RPRGRD
Trigger: ATCCCTACCACGTGGCCTCCAAAGGGAGCCACGGAG...GGCCTGAGTTTCCGTGGGCAGCTGGCGGGGACCTGTGCTGCTGCTGCTGACTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
3UTR-3UTR TCA 90 bp GGCAGGCGCGGGCCTGGGGACGAGATAGCACCGGGGCAGGCTGTGGCGAATCCGCATAGGTCTCGCGGTTaGGGTAGAAATCCTAGTTAC +
Preference number: 2 (lower is better)
Translates to: GRRGPGDEIAPGQAVANPHRSRG*GRNPSY
Trigger: GTAACTAGGATTTCTACCTCAACCGCGAGACCTATG...CGGATTCGCCACAGCCTGCCCCGGTGCTATCTCGTCCCCAGGCCCGCGCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457590.2
3UTR-3UTR TCA 90 bp CCCACAGGGCCCGGCTGTGGTAAAGAGGTCGGCGACCTCCGTTTCTCTAATGTACCTGGGCCACACACGTaGGGGAGCAGCTCGGGAGCA +
Preference number: 2 (lower is better)
Translates to: PTGPGCGKEVGDLRFSNVPGPHT*GSSSGA
Trigger: TGCTCCCGAGCTGCTCCCTCACGTGTGTGGCCCAGG...TACATTAGAGAAACGGAGGTCGCCGACCTCTTTACCACAGCCGGGCCCTGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586024.1
3UTR-3UTR GCA 90 bp TGTCTGGGCTGCTGGGAGCTGCAACTGAGGGGTCTAGGGTCGGGGCTGACGCTGGGTCCACACCGTCCTTaGATAGGTCTCGCGGTTGAG +
Preference number: 2 (lower is better)
Translates to: CLGCWELQLRGLGSGLTLGPHRP*IGLAVE
Trigger: CTCAACCGCGAGACCTATGCAAGGACGGTGTGGACC...CAGCGTCAGCCCCGACCCTAGACCCCTCAGTTGCAGCTCCCAGCAGCCCAGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
3UTR-3UTR GCA 90 bp ATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGCAAGGCTGGCGGGCCCGCCCTaGAGACACGTGTCTTTATAT +
Preference number: 2 (lower is better)
Translates to: IAQHMASCVTAQAPSHARLAGPP*RHVSLY
Trigger: ATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAG...CCTTGCATGTGAAGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR-3UTR GCA 90 bp GATGTGACGTGTGTCCATCCTGCCCTTGGGAACCAGAACACAGGGCTGGCAGCTCAGCACATGGCCAGCTaGGTCACCGCGCAGGCCCCT +
Preference number: 2 (lower is better)
Translates to: DVTCVHPALGNQNTGLAAQHMAS*VTAQAP
Trigger: AGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTG...AGCTGCCAGCCCTGTGTTCTGGTTCCCAAGGGCAGGATGGACACACGTCACATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
3UTR-3UTR GCA 90 bp GGCCACCAGGTCGAAGGAGGTCTCCCCGTACACCTCGGGGGAGAAGGGCTCGTACTCGAAGCTGGGCACTaGATGTGCCGAGGTTCACAC +
Preference number: 2 (lower is better)
Translates to: GHQVEGGLPVHLGGEGLVLEAGH*MCRGSH
Trigger: GTGTGAACCTCGGCACATGCAGTGCCCAGCTTCGAG...TACGAGCCCTTCTCCCCCGAGGTGTACGGGGAGACCTCCTTCGACCTGGTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478937.3
3UTR-3UTR GCA 90 bp GGCCACCAGGTCGAAGGAGGTCTCCCCGTACACCTCGGGGGAGAAGGGCTCGTATTCAGCTTCATGGGCTaGGTGGTGCCCTTCCACAGC +
Preference number: 2 (lower is better)
Translates to: GHQVEGGLPVHLGGEGLVFSFMG*VVPFHS
Trigger: GCTGTGGAAGGGCACCACGCAGCCCATGAAGCTGAA...TACGAGCCCTTCTCCCCCGAGGTGTACGGGGAGACCTCCTTCGACCTGGTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478937.3
3UTR-3UTR CCA 90 bp ATCTGGGCCACCAGGTCGAAGGAGGTCTCCCCGTACACCTCGGGGGAGAAGGGCGTGCCCTTCCACAGCTaGTGGATGCTGTCGATGGCA +
Preference number: 2 (lower is better)
Translates to: IWATRSKEVSPYTSGEKGVPFHS*WMLSMA
Trigger: TGCCATCGACAGCATCCACCAGCTGTGGAAGGGCAC...GCCCTTCTCCCCCGAGGTGTACGGGGAGACCTCCTTCGACCTGGTGGCCCAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478937.3
3UTR-3UTR TCA 90 bp GCGGACCGTGACAATGCGCGCAATCCAAATACAGTTCACCCGGAAGACACGGCATGCCAGGCGTGGCCCTaGCAGGAAGGGATGTGGGGC +
Preference number: 2 (lower is better)
Translates to: ADRDNARNPNTVHPEDTACQAWP*QEGMWG
Trigger: GCCCCACATCCCTTCCTGTCAGGGCCACGCCTGGCA...TGCCGTGTCTTCCGGGTGAACTGTATTTGGATTGCGCGCATTGTCACGGTCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
3UTR-3UTR GCA 90 bp ACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGCATCTGGGGGTTCACAGTaGCGGGGTAAAGGTGAAGAG +
Preference number: 2 (lower is better)
Translates to: TIAQHMASCVTAQAPSHASGGSQ*RGKGEE
Trigger: CTCTTCACCTTTACCCCGGCACTGTGAACCCCCAGA...TGCATGTGAAGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR-3UTR GCA 90 bp GGGCCCGGCTGTGGTAAAGAGGTCGGCGACCTCCGTTTCTCTAATGTACGCTGGGGAGCACGTGAGTGGTaGTTCCCGACGTCCGTCAGC +
Preference number: 2 (lower is better)
Translates to: GPGCGKEVGDLRFSNVRWGAREW*FPTSVS
Trigger: GCTGACGGACGTCGGGAAGCACCACTCACGTGCTCC...CCAGCGTACATTAGAGAAACGGAGGTCGCCGACCTCTTTACCACAGCCGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586024.1
3UTR-3UTR GCA 90 bp ATCAATCATCTGGGCCACCAGGTCGAAGGAGGTCTCCCCGTACACCTCGGGGGACGCAGAGCCTCTGCATaGTCTCGAAGCTGGGCACTG +
Preference number: 2 (lower is better)
Translates to: INHLGHQVEGGLPVHLGGRRASA*SRSWAL
Trigger: CAGTGCCCAGCTTCGAGAGCATGCAGAGGCTCTGCG...TCCCCCGAGGTGTACGGGGAGACCTCCTTCGACCTGGTGGCCCAGATGATTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478937.3
3UTR-3UTR CCA 90 bp CCACTCATTAGTGTGACTCTCTCCTGTACAGAAACACCAAGGGACCCACGACAGCACCGGGGCAGGCTGTaGCGAATCCGCTGGCGGGCC +
Preference number: 2 (lower is better)
Translates to: PLISVTLSCTETPRDPRQHRGRL*RIRWRA
Trigger: GGCCCGCCAGCGGATTCGCCACAGCCTGCCCCGGTG...CTGTCGTGGGTCCCTTGGTGTTTCTGTACAGGAGAGAGTCACACTAATGAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR-3UTR CCA 90 bp ACAGTCAGCAGCAGCAGCACAGGTCCCCGCCAGCTGCCCACGGAAACTCAGGCCAGCTATGTTGGAGGGTaGGGGTCTGAGAGGTTGTTG +
Preference number: 2 (lower is better)
Translates to: TVSSSSTGPRQLPTETQASYVGG*GSERLL
Trigger: CAACAACCTCTCAGACCCCCACCCTCCAACATAGCT...GGCCTGAGTTTCCGTGGGCAGCTGGCGGGGACCTGTGCTGCTGCTGCTGACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
3UTR-3UTR CCA 90 bp TCATCTGGGCCACCAGGTCGAAGGAGGTCTCCCCGTACACCTCGGGGGAGAAGGGGTGGATGCTGTCGATaGCACGGTTGTACTTGTCGC +
Preference number: 2 (lower is better)
Translates to: SSGPPGRRRSPRTPRGRRGGCCR*HGCTCR
Trigger: GCGACAAGTACAACCGTGCCATCGACAGCATCCACC...CCTTCTCCCCCGAGGTGTACGGGGAGACCTCCTTCGACCTGGTGGCCCAGATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000478937.3
3UTR-3UTR TCA 90 bp ATCAATCATCTGGGCCACCAGGTCGAAGGAGGTCTCCCCGTACACCTCGGGGGAAGGGCTCGTAGTTGTTaGGCTTCTCGGGGTCGGTCA +
Preference number: 2 (lower is better)
Translates to: INHLGHQVEGGLPVHLGGRARSC*ASRGRS
Trigger: TGACCGACCCCGAGAAGCTCAACAACTACGAGCCCT...TCCCCCGAGGTGTACGGGGAGACCTCCTTCGACCTGGTGGCCCAGATGATTGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000478937.3
3UTR-3UTR TCA 90 bp GCTGTGGTAAAGAGGTCGGCGACCTCCGTTTCTCTAATGTACGCTGGTGAGGCTCAGCTCGGGAGCACGTaGGTGGTGCTTCCCGACGTC +
Preference number: 2 (lower is better)
Translates to: AVVKRSATSVSLMYAGEAQLGST*VVLPDV
Trigger: GACGTCGGGAAGCACCACTCACGTGCTCCCGAGCTG...AGCCTCACCAGCGTACATTAGAGAAACGGAGGTCGCCGACCTCTTTACCACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586024.1
3UTR-3UTR GCA 90 bp ATTAGTGTGACTCTCTCCTGTACAGAAACACCAAGGGACCCACGACAGGCCTGCGCCTCCTGCGGCGCGTaGCGCCGATTCACAGTGGAG +
Preference number: 2 (lower is better)
Translates to: ISVTLSCTETPRDPRQACASCGA*RRFTVE
Trigger: CTCCACTGTGAATCGGCGGCACGCGCCGCAGGAGGC...GCAGGCCTGTCGTGGGTCCCTTGGTGTTTCTGTACAGGAGAGAGTCACACTAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR-3UTR GCA 90 bp CCACTCATTAGTGTGACTCTCTCCTGTACAGAAACACCAAGGGACCCACGACAGCCAGTCCCAGCCTCCTaGGGCGCGTGCCGCCGATTC +
Preference number: 2 (lower is better)
Translates to: PLISVTLSCTETPRDPRQPVPAS*GACRRF
Trigger: GAATCGGCGGCACGCGCCGCAGGAGGCTGGGACTGG...CTGTCGTGGGTCCCTTGGTGTTTCTGTACAGGAGAGAGTCACACTAATGAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR-3UTR GCA 90 bp GGGCTCGTAGTTGTTGAGCTTCTCGGGGTCGGTCACCGAGTGGTTGTAGACCTGGCTGGGCACTGCATGTaGCGAGGTTCACACTTCCCC +
Preference number: 2 (lower is better)
Translates to: GLVVVELLGVGHRVVVDLAGHCM*RGSHFP
Trigger: GGGGAAGTGTGAACCTCGGCACATGCAGTGCCCAGC...CAGGTCTACAACCACTCGGTGACCGACCCCGAGAAGCTCAACAACTACGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478937.3
3UTR-3UTR CCA 90 bp CATCGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAAATACAAAAGTAAATGCCTGTGGCGAATCCGCTaGCGGGCCCGCCCTGCAGAC +
Preference number: 2 (lower is better)
Translates to: HRRACCEPWTAEKYKSKCLWRIR*RARPAD
Trigger: GTCTGCAGGGCGGGCCCGCCAGCGGATTCGCCACAG...GCATTTACTTTTGTATTTCTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR-3UTR CCA 90 bp GGGCTCGTAGTTGTTGAGCTTCTCGGGGTCGGTCACCGAGTGGTTGTAGACCTGGCTTCATGGGCTGCGTaGTGCCCTTCCACAGCTGGT +
Preference number: 2 (lower is better)
Translates to: GLVVVELLGVGHRVVVDLASWAA*CPSTAG
Trigger: ACCAGCTGTGGAAGGGCACCACGCAGCCCATGAAGC...CAGGTCTACAACCACTCGGTGACCGACCCCGAGAAGCTCAACAACTACGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478937.3
3UTR CAA 90 bp GTGCCCTTCCACAGCTGGTGGATGCTGTCGATGGCACGGTTGTACTaGTCGCAGAGCCTCTGCATGCTCTCGAAGCTGGGCACTGCATGT +
Preference number: 2 (lower is better)
Translates to: VPFHSWWMLSMARLY*SQSLCMLSKLGTAC
Trigger: ACATGCAGTGCCCAGCTTCGAGAGCATGCAGAGGCTCTGCGACAAGTACAACCGTGCCATCGACAGCATCCACCAGCTGTGGAAGGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478937.3
3UTR-3UTR GCA 90 bp ATTAGTGTGACTCTCTCCTGTACAGAAACACCAAGGGACCCACGACAGGCCTGCTGGTGGCGACGGGCCTaGCTTTGGTACGGGAGCAGC +
Preference number: 2 (lower is better)
Translates to: ISVTLSCTETPRDPRQACWWRRA*LWYGSS
Trigger: GCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCA...GCAGGCCTGTCGTGGGTCCCTTGGTGTTTCTGTACAGGAGAGAGTCACACTAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR-3UTR GCA 90 bp CCACTCATTAGTGTGACTCTCTCCTGTACAGAAACACCAAGGGACCCACGACAGGACCCACGACAGGCCTaGCCCGCATCGCAGGGCATG +
Preference number: 2 (lower is better)
Translates to: PLISVTLSCTETPRDPRQDPRQA*PASQGM
Trigger: CATGCCCTGCGATGCGGGGCAGGCCTGTCGTGGGTC...CTGTCGTGGGTCCCTTGGTGTTTCTGTACAGGAGAGAGTCACACTAATGAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR-3UTR CCA 90 bp GCTGTGGTAAAGAGGTCGGCGACCTCCGTTTCTCTAATGTACGCTGGTGAGGCTTCGGGAGCACGTGAGTaGTGCTTCCCGACGTCCGTC +
Preference number: 2 (lower is better)
Translates to: AVVKRSATSVSLMYAGEASGARE*CFPTSV
Trigger: GACGGACGTCGGGAAGCACCACTCACGTGCTCCCGA...AGCCTCACCAGCGTACATTAGAGAAACGGAGGTCGCCGACCTCTTTACCACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586024.1
3UTR-3UTR GCA 90 bp CATCGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAAATACAAAAGTAAATGCGCAGGCCCCTTCACATaGAAGGGCGCAACCCACGCC +
Preference number: 2 (lower is better)
Translates to: HRRACCEPWTAEKYKSKCAGPFT*KGATHA
Trigger: GGCGTGGGTTGCGCCCTTGCATGTGAAGGGGCCTGC...GCATTTACTTTTGTATTTCTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR-3UTR GCA 90 bp GAAGTCTTAAATAAGTCACTGTGCGTGCCTCATGGGCCGAGGAGGGGGTATCCTCATCGCAGGGCATGCTaGGAGCCATGGACAGCCGAG +
Preference number: 2 (lower is better)
Translates to: EVLNKSLCVPHGPRRGYPHRRAC*EPWTAE
Trigger: CTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGATG...AGGATACCCCCTCCTCGGCCCATGAGGCACGCACAGTGACTTATTTAAGACTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398665.8
3UTR-3UTR CCA 90 bp GATCTCATCAATCATCTGGGCCACCAGGTCGAAGGAGGTCTCCCCGTACACCTCACCTGCTGCAGGATATaGCGCAGGAGTCCAGTGGAC +
Preference number: 2 (lower is better)
Translates to: DLINHLGHQVEGGLPVHLTCCRI*RRSPVD
Trigger: GTCCACTGGACTCCTGCGCCATATCCTGCAGCAGGT...GAGGTGTACGGGGAGACCTCCTTCGACCTGGTGGCCCAGATGATTGATGAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478937.3
3UTR CAA 90 bp CACTCACCGCTCCCCAAGTCCACAAACAGGTCGTCGTCGGTCATCTaGATCTCATCAATCATCTGGGCCACCAGGTCGAAGGAGGTCTCC +
Preference number: 2 (lower is better)
Translates to: HSPLPKSTNRSSSVI*ISSIIWATRSKEVS
Trigger: GGAGACCTCCTTCGACCTGGTGGCCCAGATGATTGATGAGATCAAGATGACCGACGACGACCTGTTTGTGGACTTGGGGAGCGGTGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478937.3
3UTR-3UTR CCA 90 bp CCCCAAGTCCACAAACAGGTCGTCGTCGGTCATCTTGATCTCATCAATCATCTGGGCGCAGGAGTCCAGTaGACGGCCGCGTGTTCAGCT +
Preference number: 2 (lower is better)
Translates to: PQVHKQVVVGHLDLINHLGAGVQ*TAACSA
Trigger: AGCTGAACACGCGGCCGTCCACTGGACTCCTGCGCC...CAGATGATTGATGAGATCAAGATGACCGACGACGACCTGTTTGTGGACTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478937.3
3UTR-3UTR CCA 90 bp ACAAAAATGGTCAGAACCCAAATATGCTCTTCCCGAGGGCTCTACTCCAGGCAGCTGGTGAGGCTCGCCTaGGCCACACACGTGAGGGAG +
Preference number: 2 (lower is better)
Translates to: TKMVRTQICSSRGLYSRQLVRLA*ATHVRE
Trigger: CTCCCTCACGTGTGTGGCCCAGGCGAGCCTCACCAG...CTGCCTGGAGTAGAGCCCTCGGGAAGAGCATATTTGGGTTCTGACCATTTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586024.1
3UTR-3UTR GCA 90 bp CATCTTGATCTCATCAATCATCTGGGCCACCAGGTCGAAGGAGGTCTCCCCGTATTGTCGCAGAGCCTCTaGATGCTCTCGAAGCTGGGC +
Preference number: 2 (lower is better)
Translates to: HLDLINHLGHQVEGGLPVLSQSL*MLSKLG
Trigger: GCCCAGCTTCGAGAGCATGCAGAGGCTCTGCGACAA...TACGGGGAGACCTCCTTCGACCTGGTGGCCCAGATGATTGATGAGATCAAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478937.3
3UTR-3UTR GCA 90 bp GGTCATCTTGATCTCATCAATCATCTGGGCCACCAGGTCGAAGGAGGTCTCCCCTCCACAGCTGGTGGATaGTGTCGATGGCACGGTTGT +
Preference number: 2 (lower is better)
Translates to: GHLDLINHLGHQVEGGLPSTAGG*CRWHGC
Trigger: ACAACCGTGCCATCGACAGCATCCACCAGCTGTGGA...GGGGAGACCTCCTTCGACCTGGTGGCCCAGATGATTGATGAGATCAAGATGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478937.3
3UTR-3UTR CCA 90 bp CTCCCCAAGTCCACAAACAGGTCGTCGTCGGTCATCTTGATCTCATCAATCATCGCATGCTCTCGAAGCTaGGCACTGCATGTGCCGAGG +
Preference number: 2 (lower is better)
Translates to: LPKSTNRSSSVILISSIIACSRS*ALHVPR
Trigger: CCTCGGCACATGCAGTGCCCAGCTTCGAGAGCATGC...GATGATTGATGAGATCAAGATGACCGACGACGACCTGTTTGTGGACTTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478937.3
3UTR-3UTR CCA 90 bp CTCCCCAAGTCCACAAACAGGTCGTCGTCGGTCATCTTGATCTCATCAATCATCGCGTGTTCAGCTTCATaGGCTGCGTGGTGCCCTTCC +
Preference number: 2 (lower is better)
Translates to: LPKSTNRSSSVILISSIIACSAS*AAWCPS
Trigger: GGAAGGGCACCACGCAGCCCATGAAGCTGAACACGC...GATGATTGATGAGATCAAGATGACCGACGACGACCTGTTTGTGGACTTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478937.3
3UTR-3UTR GCA 90 bp GCCCCGCATCGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAAATACAAAAGTAAATACAAAAGTAAATaGACTTGTTCAACGTGCCCG +
Preference number: 2 (lower is better)
Translates to: APHRRACCEPWTAEKYKSKYKSK*TCSTCP
Trigger: CGGGCACGTTGAACAAGTGCATTTACTTTTGTATTT...ACTTTTGTATTTCTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGATGCGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR CCA 72 bp GAGCTCCCGTCCGTCCTTGCCTCTGCCGTCCAGGGGTaGGAGCCCGGCAGGCCGGCGGGCACCATGCCGCGG +
Preference number: 3 (lower is better)
Translates to: ELPSVLASAVQG*EPGRPAGTMPR
Trigger: CCGCGGCATGGTGCCCGCCGGCCTGCCGGGCTCCCACCCCTGGACGGCAGAGGCAAGGACGGACGGGAGCTC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR CCA 72 bp GGCCTCCGAGGAATGTGGTGGCGACGGGCCTGCCTTTaGTACGGGAGCAGCGCGTCGGGGGAGCCGGCCGGG +
Preference number: 3 (lower is better)
Translates to: GLRGMWWRRACL*YGSSASGEPAG
Trigger: CCCGGCCGGCTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCACATTCCTCGGAGGCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR GCA 72 bp CGGGGAGGCCTCCGAGGAATGTGGTGGCGACGGGCCTaGCTTTGGTACGGGAGCAGCGCGTCGGGGGAGCCG +
Preference number: 3 (lower is better)
Translates to: RGGLRGMWWRRA*LWYGSSASGEP
Trigger: CGGCTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCACATTCCTCGGAGGCCTCCCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR CCA 72 bp GGGCTCAGGCCGCGGGGAGGCCTCCGAGGAATGTGGTaGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCG +
Preference number: 3 (lower is better)
Translates to: GLRPRGGLRGMW*RRACLWYGSSA
Trigger: CGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCACATTCCTCGGAGGCCTCCCCGCGGCCTGAGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR-3UTR CAA 90 bp CGGCAGGCCGGCGGGCACCATGCCGCGGGCGCGAGTTGGTCCACACCGTCCTTGTGCCGCGGGCGCGAGTaGGTCCACACCGTCCTTGCA +
Preference number: 3 (lower is better)
Translates to: RQAGGHHAAGASWSTPSLCRGRE*VHTVLA
Trigger: TGCAAGGACGGTGTGGACCAACTCGCGCCCGCGGCA...CAAGGACGGTGTGGACCAACTCGCGCCCGCGGCATGGTGCCCGCCGGCCTGCCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR-3UTR CAA 90 bp TGGTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGCCGGCCAGCTCCCGTCCGTCCTaGCCTCTGCCGTCCAGGGGT +
Preference number: 3 (lower is better)
Translates to: WWRRACLWYGSSASGEPASSRPS*PLPSRG
Trigger: ACCCCTGGACGGCAGAGGCAAGGACGGACGGGAGCT...GGCCGGCTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR GCA 72 bp GTGCCGCCGATTCACAGTGGAGCTCCCGTCCGTCCTTaGCTCTGCCGTCCAGGGGTGGGAGCCCGGCAGGCC +
Preference number: 3 (lower is better)
Translates to: VPPIHSGAPVRP*LCRPGVGARQA
Trigger: GGCCTGCCGGGCTCCCACCCCTGGACGGCAGAGGCAAGGACGGACGGGAGCTCCACTGTGAATCGGCGGCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR TCA 72 bp TCCGGCCCGTGGCGACACAGAGCAGGCTGCCTGTCCTaGAGGCCAGGCTCGGGGCTTGGGGCTCAGGCAGAG +
Preference number: 3 (lower is better)
Translates to: SGPWRHRAGCLS*RPGSGLGAQAE
Trigger: CTCTGCCTGAGCCCCAAGCCCCGAGCCTGGCCTTCAGGACAGGCAGCCTGCTCTGTGTCGCCACGGGCCGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
3UTR CCA 72 bp TCCCAGCCTCCTGCGGCGCGTGCCGCCGATTCACAGTaGAGCTCCCGTCCGTCCTTGCCTCTGCCGTCCAGG +
Preference number: 3 (lower is better)
Translates to: SQPPAARAADSQ*SSRPSLPLPSR
Trigger: CCTGGACGGCAGAGGCAAGGACGGACGGGAGCTCCACTGTGAATCGGCGGCACGCGCCGCAGGAGGCTGGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR CCA 72 bp AAGGGGCTCAGGCCGCGGGGAGGCCTCCGAGGAATGTaGTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGC +
Preference number: 3 (lower is better)
Translates to: KGLRPRGGLRGM*WRRACLWYGSS
Trigger: GCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCACATTCCTCGGAGGCCTCCCCGCGGCCTGAGCCCCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR CCA 72 bp GCCCGCGCCGTCCTCACAGCACCATCGCGCAGCACATaGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATG +
Preference number: 3 (lower is better)
Translates to: ARAVLTAPSRST*PAASPRRPLHM
Trigger: CATGTGAAGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGTGCTGTGAGGACGGCGCGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR-3UTR CAA 90 bp GTCCTCACAGCACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCTGCCGCGGGCGCGAGTaGGTCCACACCGTCCTTGCA +
Preference number: 3 (lower is better)
Translates to: VLTAPSRSTWPAASPRRPCRGRE*VHTVLA
Trigger: TGCAAGGACGGTGTGGACCAACTCGCGCCCGCGGCA...GGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGTGCTGTGAGGAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR-3UTR CAA 90 bp GAATGTGGTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGCAGCTCCCGTCCGTCCTaGCCTCTGCCGTCCAGGGGT +
Preference number: 3 (lower is better)
Translates to: ECGGDGPAFGTGAARRGSSSRPS*PLPSRG
Trigger: ACCCCTGGACGGCAGAGGCAAGGACGGACGGGAGCT...GCTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCACATTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR GCA 72 bp CATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATaGAAGGGCGCAACCCACGCCCCGGAGGGTGAACAG +
Preference number: 3 (lower is better)
Translates to: HGQLRHRAGPFT*KGATHAPEGEQ
Trigger: CTGTTCACCCTCCGGGGCGTGGGTTGCGCCCTTGCATGTGAAGGGGCCTGCGCGGTGACGCAGCTGGCCATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR GCA 72 bp CGTCCTCACAGCACCATCGCGCAGCACATGGCCAGCTaGGTCACCGCGCAGGCCCCTTCACATGCAAGGGCG +
Preference number: 3 (lower is better)
Translates to: RPHSTIAQHMAS*VTAQAPSHARA
Trigger: CGCCCTTGCATGTGAAGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGTGCTGTGAGGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR GCA 72 bp CCACAGTCAGCAGCAGCAGCACAGGTCCCCGCCAGCTaGCCACGGAAACTCAGGCCAGGTGCCAGCACCAGG +
Preference number: 3 (lower is better)
Translates to: PQSAAAAQVPAS*PRKLRPGASTR
Trigger: CCTGGTGCTGGCACCTGGCCTGAGTTTCCGTGGGCAGCTGGCGGGGACCTGTGCTGCTGCTGCTGACTGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
3UTR CCA 72 bp AGACCAGGGACTCGGCCGTCTCTGCCATCAACCCTGTaGCGTATCCGGCCCGTGGCGACACAGAGCAGGCTG +
Preference number: 3 (lower is better)
Translates to: RPGTRPSLPSTL*RIRPVATQSRL
Trigger: CAGCCTGCTCTGTGTCGCCACGGGCCGGATACGCCACAGGGTTGATGGCAGAGACGGCCGAGTCCCTGGTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
3UTR CCA 72 bp GACCCAGTGCGTGTCCTGAACATACGGTGGCCTGCGTaGGCAGGAGCCCTGCATGGCCATCTGCAGGACCCG +
Preference number: 3 (lower is better)
Translates to: DPVRVLNIRWPA*AGALHGHLQDP
Trigger: CGGGTCCTGCAGATGGCCATGCAGGGCTCCTGCCCACGCAGGCCACCGTATGTTCAGGACACGCACTGGGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
3UTR TCA 72 bp GGCACAGAGCCACCACTGCTCAGACAACCCAGGCCCTaGCTGCTCAGGGCTCCAGAAGCACTGGAGTGGCCC +
Preference number: 3 (lower is better)
Translates to: GTEPPLLRQPRP*LLRAPEALEWP
Trigger: GGGCCACTCCAGTGCTTCTGGAGCCCTGAGCAGTCAGGGCCTGGGTTGTCTGAGCAGTGGTGGCTCTGTGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
3UTR GCA 72 bp GTGGGCTCAGCAAGTGCCACACAGCCCAGGGCCAGATaGGGGGAGCTCAGACTCCCAGATCCCATCCTCCAG +
Preference number: 3 (lower is better)
Translates to: VGSASATQPRAR*GELRLPDPILQ
Trigger: CTGGAGGATGGGATCTGGGAGTCTGAGCTCCCCGCATCTGGCCCTGGGCTGTGTGGCACTTGCTGAGCCCAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398665.8
3UTR CCA 72 bp AGAGCGTGTGGCCTGGAAGTGCACAGGAGCCGGGCATaGCGGGCGACACTCACCGCTCCCCAAGTCCACAAA +
Preference number: 3 (lower is better)
Translates to: RACGLEVHRSRA*RATLTAPQVHK
Trigger: TTTGTGGACTTGGGGAGCGGTGAGTGTCGCCCGCCATGCCCGGCTCCTGTGCACTTCCAGGCCACACGCTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478937.3
3UTR-3UTR CAA 90 bp GGTAGGGATGTGACGTGTGTCCATCCTGCCCTTGGGAACCAGAACACAGGGCTGGCGACGGGCCTGCCTTaGGTACGGGAGCAGCGCGTC +
Preference number: 3 (lower is better)
Translates to: GRDVTCVHPALGNQNTGLATGLP*VREQRV
Trigger: GACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGC...CAGCCCTGTGTTCTGGTTCCCAAGGGCAGGATGGACACACGTCACATCCCTACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
3UTR TCA 72 bp CAGAGGAAGGGGCGCCTGCAGCCCAGGGGCGGACCGTaGCAATGCGCGCAATCCAAATACAGTTCACCCGGA +
Preference number: 3 (lower is better)
Translates to: QRKGRLQPRGGP*QCAQSKYSSPG
Trigger: TCCGGGTGAACTGTATTTGGATTGCGCGCATTGTCACGGTCCGCCCCTGGGCTGCAGGCGCCCCTTCCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
3UTR GCA 72 bp TCCTGTACAGAAACACCAAGGGACCCACGACAGGCCTaGCCCGCATCGCAGGGCATGCTGCGAGCCATGGAC +
Preference number: 3 (lower is better)
Translates to: SCTETPRDPRQA*PASQGMLRAMD
Trigger: GTCCATGGCTCGCAGCATGCCCTGCGATGCGGGGCAGGCCTGTCGTGGGTCCCTTGGTGTTTCTGTACAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR GCA 72 bp AGTCCAGTGGACGGCCGCGTGTTCAGCTTCATGGGCTaGGTGGTGCCCTTCCACAGCTGGTGGATGCTGTCG +
Preference number: 3 (lower is better)
Translates to: SPVDGRVFSFMG*VVPFHSWWMLS
Trigger: CGACAGCATCCACCAGCTGTGGAAGGGCACCACGCAGCCCATGAAGCTGAACACGCGGCCGTCCACTGGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478937.3
3UTR-3UTR CAA 90 bp GAAGTGCACAGGAGCCGGGCATGGCGGGCGACACTCACCGCTCCCCAAGTCCACATGGCACGGTTGTACTaGTCGCAGAGCCTCTGCATG +
Preference number: 3 (lower is better)
Translates to: EVHRSRAWRATLTAPQVHMARLY*SQSLCM
Trigger: CATGCAGAGGCTCTGCGACAAGTACAACCGTGCCAT...GTGGACTTGGGGAGCGGTGAGTGTCGCCCGCCATGCCCGGCTCCTGTGCACTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478937.3
3UTR-3UTR CAA 90 bp ACAGTCAGCAGCAGCAGCACAGGTCCCCGCCAGCTGCCCACGGAAACTCAGGCCCAGAACTCAGCTATGTaGGAGGGTGGGGGTCTGAGA +
Preference number: 3 (lower is better)
Translates to: TVSSSSTGPRQLPTETQAQNSAM*EGGGLR
Trigger: TCTCAGACCCCCACCCTCCAACATAGCTGAGTTCTG...GGCCTGAGTTTCCGTGGGCAGCTGGCGGGGACCTGTGCTGCTGCTGCTGACTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398665.8
3UTR TCA 72 bp GGGGCTCCCCGATGCCATCTCACAGGAGCAAGCACTTaGGAAGGTGGGCTCAGCAAGTGCCACACAGCCCAG +
Preference number: 3 (lower is better)
Translates to: GAPRCHLTGAST*EGGLSKCHTAQ
Trigger: CTGGGCTGTGTGGCACTTGCTGAGCCCACCTTCTCAAGTGCTTGCTCCTGTGAGATGGCATCGGGGAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
3UTR CCA 72 bp CTAGCTGAGAGCACCAACGTGGGGTGGGGAGGGCACTaGGCACCACTTAAGAGGACAGGTCCGGAGCACCAT +
Preference number: 3 (lower is better)
Translates to: LAESTNVGWGGH*APLKRTGPEHH
Trigger: ATGGTGCTCCGGACCTGTCCTCTTAAGTGGTGCCCAGTGCCCTCCCCACCCCACGTTGGTGCTCTCAGCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
3UTR TCA 72 bp CGGAAGACACGGCAGAGCCTCCCACGTTACAAAGGCTaGCACAGACCAGCAGCGTGTTGTGTTGGGAGGGGG +
Preference number: 3 (lower is better)
Translates to: RKTRQSLPRYKG*HRPAACCVGRG
Trigger: CCCCCTCCCAACACAACACGCTGCTGGTCTGTGTCAGCCTTTGTAACGTGGGAGGCTCTGCCGTGTCTTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
3UTR GCA 72 bp ATGTGTCTTGTTCTAGACCAGGGACTCGGCCGTCTCTaGCATCAACCCTGTGGCGTATCCGGCCCGTGGCGA +
Preference number: 3 (lower is better)
Translates to: MCLVLDQGLGRL*HQPCGVSGPWR
Trigger: TCGCCACGGGCCGGATACGCCACAGGGTTGATGGCAGAGACGGCCGAGTCCCTGGTCTAGAACAAGACACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
3UTR TCA 72 bp TCCGTGGCTCCCTTTGGAGGCCACGTGGTAGGGATGTaGCGTGTGTCCATCCTGCCCTTGGGAACCAGAACA +
Preference number: 3 (lower is better)
Translates to: SVAPFGGHVVGM*RVSILPLGTRT
Trigger: TGTTCTGGTTCCCAAGGGCAGGATGGACACACGTCACATCCCTACCACGTGGCCTCCAAAGGGAGCCACGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
3UTR TCA 72 bp GGGGGTATCCTAGTTTTTAGGGTTCCTATCAATTCCTaGGCAAGAGCCACTCCCAGGCGCCGCCCGCCCACC +
Preference number: 3 (lower is better)
Translates to: GGILVFRVPINS*ARATPRRRPPT
Trigger: GGTGGGCGGGCGGCGCCTGGGAGTGGCTCTTGCTCAGGAATTGATAGGAACCCTAAAAACTAGGATACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000398665.8
3UTR GCA 72 bp CTGTCGATGGCACGGTTGTACTTGTCGCAGAGCCTCTaGATGCTCTCGAAGCTGGGCACTGCATGTGCCGAG +
Preference number: 3 (lower is better)
Translates to: LSMARLYLSQSL*MLSKLGTACAE
Trigger: CTCGGCACATGCAGTGCCCAGCTTCGAGAGCATGCAGAGGCTCTGCGACAAGTACAACCGTGCCATCGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478937.3
3UTR CCA 72 bp CCGATGCCATCTCACAGGAGCAAGCACTTGAGAAGGTaGGCTCAGCAAGTGCCACACAGCCCAGGGCCAGAT +
Preference number: 3 (lower is better)
Translates to: PMPSHRSKHLRR*AQQVPHSPGPD
Trigger: ATCTGGCCCTGGGCTGTGTGGCACTTGCTGAGCCCACCTTCTCAAGTGCTTGCTCCTGTGAGATGGCATCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
3UTR TCA 72 bp AGCCACCACACTAGTTCACGTGTGGTGACACGCATATaGCCCAGTGGGCTCAAGGAGACTTCTGCCTGGGCC +
Preference number: 3 (lower is better)
Translates to: SHHTSSRVVTRI*PSGLKETSAWA
Trigger: GGCCCAGGCAGAAGTCTCCTTGAGCCCACTGGGTCATATGCGTGTCACCACACGTGAACTAGTGTGGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
3UTR GCA 72 bp ACCATGCCGCGGGCGCGAGTTGGTCCACACCGTCCTTaGATAGGTCTCGCGGTTGAGGTAGAAATCCTAGTT +
Preference number: 3 (lower is better)
Translates to: TMPRARVGPHRP*IGLAVEVEILV
Trigger: AACTAGGATTTCTACCTCAACCGCGAGACCTATGCAAGGACGGTGTGGACCAACTCGCGCCCGCGGCATGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457590.2
3UTR TCA 72 bp TGTCCGCAGGCAGCCACCACACTAGTTCACGTGTGGTaGCACGCATATGACCCAGTGGGCTCAAGGAGACTT +
Preference number: 3 (lower is better)
Translates to: CPQAATTLVHVW*HAYDPVGSRRL
Trigger: AAGTCTCCTTGAGCCCACTGGGTCATATGCGTGTCACCACACGTGAACTAGTGTGGTGGCTGCCTGCGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
3UTR CCA 72 bp AGGTCGTCGTCGGTCATCTTGATCTCATCAATCATCTaGGCCACCAGGTCGAAGGAGGTCTCCCCGTACACC +
Preference number: 3 (lower is better)
Translates to: RSSSVILISSII*ATRSKEVSPYT
Trigger: GGTGTACGGGGAGACCTCCTTCGACCTGGTGGCCCAGATGATTGATGAGATCAAGATGACCGACGACGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478937.3
3UTR GCA 72 bp GCCGAGAAATACAAAAGTAAATGCACTTGTTCAACGTaGCCGCGCCGTCCTCACAGCACCATCGCGCAGCAC +
Preference number: 3 (lower is better)
Translates to: AEKYKSKCTCST*PRRPHSTIAQH
Trigger: GTGCTGCGCGATGGTGCTGTGAGGACGGCGCGGGCACGTTGAACAAGTGCATTTACTTTTGTATTTCTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR TCA 72 bp TCCCCAAGTCCACAAACAGGTCGTCGTCGGTCATCTTaGTCTCATCAATCATCTGGGCCACCAGGTCGAAGG +
Preference number: 3 (lower is better)
Translates to: SPSPQTGRRRSS*SHQSSGPPGRR
Trigger: CCTTCGACCTGGTGGCCCAGATGATTGATGAGATCAAGATGACCGACGACGACCTGTTTGTGGACTTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478937.3
3UTR GCA 72 bp TGCGAGCCATGGACAGCCGAGAAATACAAAAGTAAATaGACTTGTTCAACGTGCCCGCGCCGTCCTCACAGC +
Preference number: 3 (lower is better)
Translates to: CEPWTAEKYKSK*TCSTCPRRPHS
Trigger: GCTGTGAGGACGGCGCGGGCACGTTGAACAAGTGCATTTACTTTTGTATTTCTCGGCTGTCCATGGCTCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR-3UTR CAA 90 bp CCCCAAGTCCACAAACAGGTCGTCGTCGGTCATCTTGATCTCATCAATCATCTGCTGTCGATGGCACGGTaGTACTTGTCGCAGAGCCTC +
Preference number: 3 (lower is better)
Translates to: PQVHKQVVVGHLDLINHLLSMAR*YLSQSL
Trigger: GAGGCTCTGCGACAAGTACAACCGTGCCATCGACAG...CAGATGATTGATGAGATCAAGATGACCGACGACGACCTGTTTGTGGACTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478937.3
3UTR TCA 72 bp AGTTGGTCCACACCGTCCTTGCATAGGTCTCGCGGTTaGGGTAGAAATCCTAGTTACCTTACACAATACGCA +
Preference number: 3 (lower is better)
Translates to: SWSTPSLHRSRG*GRNPSYLTQYA
Trigger: TGCGTATTGTGTAAGGTAACTAGGATTTCTACCTCAACCGCGAGACCTATGCAAGGACGGTGTGGACCAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457590.2
3UTR GCA 72 bp GAAAAGATGATGACAAAAATGGTCAGAACCCAAATATaGTCTTCCCGAGGGCTCTACTCCAGGCAGACCCAC +
Preference number: 3 (lower is better)
Translates to: EKMMTKMVRTQI*SSRGLYSRQTH
Trigger: GTGGGTCTGCCTGGAGTAGAGCCCTCGGGAAGAGCATATTTGGGTTCTGACCATTTTTGTCATCATCTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586024.1
3UTR TCA 72 bp CATCACATCTCTATAAAATACTGCCACTCATTAGTGTaGCTCTCTCCTGTACAGAAACACCAAGGGACCCAC +
Preference number: 3 (lower is better)
Translates to: HHISIKYCHSLV*LSPVQKHQGTH
Trigger: GTGGGTCCCTTGGTGTTTCTGTACAGGAGAGAGTCACACTAATGAGTGGCAGTATTTTATAGAGATGTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp CGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGCCGGCCGGGCGGAGGGCGGAGCTGGCCTaGAGCGGGCTGTCCGCCGAC +
Preference number: 4 (lower is better)
Translates to: RRACLWYGSSASGEPAGRRAELA*SGLSAD
Trigger: GTCGGCGGACAGCCCGCTGCAGGCCAGCTCCGCCCT...CCGCCCGGCCGGCTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR TCA 90 bp CGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGCCGGCCGGGCGGGGTTGGTGCCCGGGCTaGGTCCGTCAGCCCCCGACA +
Preference number: 4 (lower is better)
Translates to: RRACLWYGSSASGEPAGRGWCPG*VRQPPT
Trigger: TGTCGGGGGCTGACGGACTCAGCCCGGGCACCAACC...CCGCCCGGCCGGCTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp GGAGCCCGGCAGGCCGGCGGGCACCATGCCGCGGGCGCGAGTTGGTCCACACCGCGTCCGAGCCCTCCTTaGCGCGCTGCGAGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: GARQAGGHHAAGASWSTPRPSPP*RAARGS
Trigger: GCTTCCCCTCGCAGCGCGGCAAGGAGGGCTCGGACG...CGGTGTGGACCAACTCGCGCCCGCGGCATGGTGCCCGCCGGCCTGCCGGGCTCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp GTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGCCGGCCGGCGCGGTCCCGGGCCTTaGCGGCCTTGCCGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: VATGLPLVREQRVGGAGRRGPGP*RPCRSA
Trigger: TGCTGAGCGGCAAGGCCGCCAAGGCCCGGGACCGCG...CCGGCCGGCTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCAC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp CGGCAGGCCGGCGGGCACCATGCCGCGGGCGCGAGTTGGTCCACACCGTCCTTGCTCTTGCTCTCGCGCTaGTGGCGGCGCCGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: RQAGGHHAAGASWSTPSLLLLSR*WRRRAA
Trigger: GGCAGCCCGGCGCCGCCAGCAGCGCGAGAGCAAGAG...CAAGGACGGTGTGGACCAACTCGCGCCCGCGGCATGGTGCCCGCCGGCCTGCCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp CGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGCCGGCCGGGCGGGGCCACCTTGCCCTCTaGGCCCTTAGTGGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: RRACLWYGSSASGEPAGRGHLAL*ALSGRG
Trigger: GCCACGCCCACTAAGGGCCCAGAGGGCAAGGTGGCC...CCGCCCGGCCGGCTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GTGGGAGCCCGGCAGGCCGGCGGGCACCATGCCGCGGGCGCGAGTTGGTCCACAAGTCCCCACGGGCGCTaGCGGTCAGGGGGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: VGARQAGGHHAAGASWSTSPHGR*RSGGCA
Trigger: AGCACAGCCCCCTGACCGCCAGCGCCCGTGGGGACT...TGTGGACCAACTCGCGCCCGCGGCATGGTGCCCGCCGGCCTGCCGGGCTCCCAC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp CGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGCCGGCCGGGCGGAGAGGCCAGCAGCGTTaGGGGAGGAGGCAAGGCGGC +
Preference number: 4 (lower is better)
Translates to: RRACLWYGSSASGEPAGRRGQQR*GRRQGG
Trigger: GCCGCCTTGCCTCCTCCCCCAACGCTGCTGGCCTCT...CCGCCCGGCCGGCTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457590.2
CDS-3UTR GCA 90 bp GTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGCCGGCCGGCAGCACATGGCCAGCTaGGTCACCGCGCAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: VATGLPLVREQRVGGAGRQHMAS*VTAQAP
Trigger: AGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTG...CCGGCCGGCTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp GTGGGAGCCCGGCAGGCCGGCGGGCACCATGCCGCGGGCGCGAGTTGGTCCACACTTGCTGCTATTGACTaGCTCGCCGGCGGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: VGARQAGGHHAAGASWSTLAAID*LAGGRG
Trigger: CCCGCGCCCGCCGGCGAGCCAGTCAATAGCAGCAAG...TGTGGACCAACTCGCGCCCGCGGCATGGTGCCCGCCGGCCTGCCGGGCTCCCAC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp GGAGCCCGGCAGGCCGGCGGGCACCATGCCGCGGGCGCGAGTTGGTCCACACCGGGCTGTCCGCCGACTTaGCCAGGCCGATGTCGGAGA +
Preference number: 4 (lower is better)
Translates to: GARQAGGHHAAGASWSTPGCPPT*PGRCRR
Trigger: TCTCCGACATCGGCCTGGCCAAGTCGGCGGACAGCC...CGGTGTGGACCAACTCGCGCCCGCGGCATGGTGCCCGCCGGCCTGCCGGGCTCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp GGCAGGCGCGGGCCTGGGGACGAGATAGCACCGGGGCAGGCTGTGGCGAATCCGAAGGACCGGTGCGTCTaGGCGGAGGACGCCGCGCCG +
Preference number: 4 (lower is better)
Translates to: GRRGPGDEIAPGQAVANPKDRCV*AEDAAP
Trigger: CGGCGCGGCGTCCTCCGCCCAGACGCACCGGTCCTT...CGGATTCGCCACAGCCTGCCCCGGTGCTATCTCGTCCCCAGGCCCGCGCCTGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp GGCAGGCGCGGGCCTGGGGACGAGATAGCACCGGGGCAGGCTGTGGCGAATCCGCACCGGGGCAGGCTGTaGCGAATCCGCTGGCGGGCC +
Preference number: 4 (lower is better)
Translates to: GRRGPGDEIAPGQAVANPHRGRL*RIRWRA
Trigger: GGCCCGCCAGCGGATTCGCCACAGCCTGCCCCGGTG...CGGATTCGCCACAGCCTGCCCCGGTGCTATCTCGTCCCCAGGCCCGCGCCTGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
3UTR CAA 72 bp AGGCCTCCGAGGAATGTGGTGGCGACGGGCCTGCCTTaGGTACGGGAGCAGCGCGTCGGGGGAGCCGGCCGG +
Preference number: 4 (lower is better)
Translates to: RPPRNVVATGLP*VREQRVGGAGR
Trigger: CCGGCCGGCTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCACATTCCTCGGAGGCCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR TCA 90 bp GTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGCCGGCCGGCCTCGCAGCGAGCCTTaGGCAGCTGCAAGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: VATGLPLVREQRVGGAGRPRSEP*AAASSG
Trigger: GCCAGAGCTTGCAGCTGCTCAAGGCTCGCTGCGAGG...CCGGCCGGCTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR TCA 90 bp GAGCACGTGAGTGGTGCTTCCCGACGTCCGTCAGCCGCCCGTGAGAGCCCGCCTTCCGTCAGCCGCCCGTaGGAGCCCGCCTCCGGGGAC +
Preference number: 4 (lower is better)
Translates to: EHVSGASRRPSAARESPPSVSRP*EPASGD
Trigger: GTCCCCGGAGGCGGGCTCTCACGGGCGGCTGACGGA...AGGCGGGCTCTCACGGGCGGCTGACGGACGTCGGGAAGCACCACTCACGTGCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586024.1
CDS-3UTR GCA 90 bp GTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGCCGGCCGGGAGGGCTCAGCTTCATaGTGCCAGGCACGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: VATGLPLVREQRVGGAGREGSAS*CQARWG
Trigger: GCCCCAGCGTGCCTGGCAGCATGAAGCTGAGCCCTC...CCGGCCGGCTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp CAGGCGCGGGCCTGGGGACGAGATAGCACCGGGGCAGGCTGTGGCGAATCCGCTCCTCCCCTGCCTCCTTaGCGCGGCTGCCCTCGCCCT +
Preference number: 4 (lower is better)
Translates to: QARAWGRDSTGAGCGESAPPLPP*RGCPRP
Trigger: AGGGCGAGGGCAGCCGCGGCAAGGAGGCAGGGGAGG...AGCGGATTCGCCACAGCCTGCCCCGGTGCTATCTCGTCCCCAGGCCCGCGCCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp TGGTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGCCGGCCGGGCCTTGGCGGCCTTaGCGCTCAGCAGTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: WWRRACLWYGSSASGEPAGPWRP*RSAVGS
Trigger: AGACCCCACTGCTGAGCGGCAAGGCCGCCAAGGCCC...GGCCGGCTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp CAGGCGCGGGCCTGGGGACGAGATAGCACCGGGGCAGGCTGTGGCGAATCCGCTCAGCACCAGAGTCCATaGGGGCGTCGGCGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: QARAWGRDSTGAGCGESAQHQSP*GRRRGR
Trigger: CCGGCCCCGCCGACGCCCCCATGGACTCTGGTGCTG...AGCGGATTCGCCACAGCCTGCCCCGGTGCTATCTCGTCCCCAGGCCCGCGCCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GGAGCCCGGCAGGCCGGCGGGCACCATGCCGCGGGCGCGAGTTGGTCCACACCGCAGTGTTCATCTTCTTaGGGCGCCCGCGCTTGCGGC +
Preference number: 4 (lower is better)
Translates to: GARQAGGHHAAGASWSTPQCSSS*GARACG
Trigger: GCCGCAAGCGCGGGCGCCCCAAGAAGATGAACACTG...CGGTGTGGACCAACTCGCGCCCGCGGCATGGTGCCCGCCGGCCTGCCGGGCTCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GGACCAGTCCCAGCCTCCTGCGGCGCGTGCCGCCGATTCACAGTGGAGCTCCCGCGCGGCCGGCCGACGTaGCTAGGGGTACAGGGCACC +
Preference number: 4 (lower is better)
Translates to: GPVPASCGACRRFTVELPRGRPT*LGVQGT
Trigger: GGTGCCCTGTACCCCTAGCCACGTCGGCCGGCCGCG...CGGGAGCTCCACTGTGAATCGGCGGCACGCGCCGCAGGAGGCTGGGACTGGTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp TGGTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGCCGGCCCGAAGGTGCAGCCGTTaGCAGGGTTGGTGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: WWRRACLWYGSSASGEPARRCSR*QGWCPG
Trigger: GCCCGGGCACCAACCCTGCCAACGGCTGCACCTTCG...GGCCGGCTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp GTGGGAGCCCGGCAGGCCGGCGGGCACCATGCCGCGGGCGCGAGTTGGTCCACAGCCGGCAGCTCTGTCTaGGCTGCTGGGAGCTGCAAC +
Preference number: 4 (lower is better)
Translates to: VGARQAGGHHAAGASWSTAGSSV*AAGSCN
Trigger: GTTGCAGCTCCCAGCAGCCCAGACAGAGCTGCCGGC...TGTGGACCAACTCGCGCCCGCGGCATGGTGCCCGCCGGCCTGCCGGGCTCCCAC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR TCA 90 bp GGAGCCCGGCAGGCCGGCGGGCACCATGCCGCGGGCGCGAGTTGGTCCACACCGAGACAACCCAGGCCCTaGCTGCTCAGGGCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: GARQAGGHHAAGASWSTPRQPRP*LLRAPE
Trigger: TTCTGGAGCCCTGAGCAGTCAGGGCCTGGGTTGTCT...CGGTGTGGACCAACTCGCGCCCGCGGCATGGTGCCCGCCGGCCTGCCGGGCTCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR TCA 90 bp GTGCTTCCCGACGTCCGTCAGCCGCCCGTGAGAGCCCGCCTCCGGGGACAGCCTCCTGGGCCACACACGTaGGGGAGCAGCTCGGGAGCA +
Preference number: 4 (lower is better)
Translates to: VLPDVRQPPVRARLRGQPPGPHT*GSSSGA
Trigger: TGCTCCCGAGCTGCTCCCTCACGTGTGTGGCCCAGG...AGGCTGTCCCCGGAGGCGGGCTCTCACGGGCGGCTGACGGACGTCGGGAAGCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586024.1
CDS-3UTR GCA 90 bp GGACCAGTCCCAGCCTCCTGCGGCGCGTGCCGCCGATTCACAGTGGAGCTCCCGCACGTGCACCAGGCCTaGGGCGGCCGGCACAGAGCT +
Preference number: 4 (lower is better)
Translates to: GPVPASCGACRRFTVELPHVHQA*GGRHRA
Trigger: AGCTCTGTGCCGGCCGCCGCAGGCCTGGTGCACGTG...CGGGAGCTCCACTGTGAATCGGCGGCACGCGCCGCAGGAGGCTGGGACTGGTCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp CGGCAGGCCGGCGGGCACCATGCCGCGGGCGCGAGTTGGTCCACACCGTCCTTGGGTGGGCTCAGCAAGTaGCACACAGCCCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: RQAGGHHAAGASWSTPSLGGLSK*HTAQGQ
Trigger: CTGGCCCTGGGCTGTGTGGCACTTGCTGAGCCCACC...CAAGGACGGTGTGGACCAACTCGCGCCCGCGGCATGGTGCCCGCCGGCCTGCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GGCAGGCGCGGGCCTGGGGACGAGATAGCACCGGGGCAGGCTGTGGCGAATCCGGCAGGTCTCCCTTGCTaGCCTCGGGCAACGGGCCCT +
Preference number: 4 (lower is better)
Translates to: GRRGPGDEIAPGQAVANPAGLPC*PRATGP
Trigger: AGGGCCCGTTGCCCGAGGCCAGCAAGGGAGACCTGC...CGGATTCGCCACAGCCTGCCCCGGTGCTATCTCGTCCCCAGGCCCGCGCCTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp CGGCAGGCCGGCGGGCACCATGCCGCGGGCGCGAGTTGGTCCACACCGTCCTTGTGGAGGGCGACTGCTTaGCACTGCCCGCACCAGTGG +
Preference number: 4 (lower is better)
Translates to: RQAGGHHAAGASWSTPSLWRATA*HCPHQW
Trigger: CCACTGGTGCGGGCAGTGCCAAGCAGTCGCCCTCCA...CAAGGACGGTGTGGACCAACTCGCGCCCGCGGCATGGTGCCCGCCGGCCTGCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGCCGGCCGGCCATGGCGTGCGAGTTaGTCAGTCTGGTGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: VATGLPLVREQRVGGAGRPWRAS*SVWWQR
Trigger: CCGCTGCCACCAGACTGACCAACTCGCACGCCATGG...CCGGCCGGCTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp GCTCAGGCCGCGGGGAGGCCTCCGAGGAATGTGGTGGCGACGGGCCTGCCTTTGCTGTGGCGAATCCGCTaGCGGGCCCGCCCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: AQAAGRPPRNVVATGLPLLWRIR*RARPAD
Trigger: GTCTGCAGGGCGGGCCCGCCAGCGGATTCGCCACAG...CAAAGGCAGGCCCGTCGCCACCACATTCCTCGGAGGCCTCCCCGCGGCCTGAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp CAGGCGCGGGCCTGGGGACGAGATAGCACCGGGGCAGGCTGTGGCGAATCCGCTAGGCAGGCGCGGGCCTaGGGACGAGATAGCACCGGG +
Preference number: 4 (lower is better)
Translates to: QARAWGRDSTGAGCGESARQARA*GRDSTG
Trigger: CCCGGTGCTATCTCGTCCCCAGGCCCGCGCCTGCCT...AGCGGATTCGCCACAGCCTGCCCCGGTGCTATCTCGTCCCCAGGCCCGCGCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp CGTCACCGCGCAGGCCCCTTCACATGCAAGGGCGCAACCCACGCCCCGGAGGGTTCAGCACCAAGCGGGTaGAGGCAGGCGCGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RHRAGPFTCKGATHAPEGSAPSG*RQARAW
Trigger: CCAGGCCCGCGCCTGCCTCCACCCGCTTGGTGCTGA...ACCCTCCGGGGCGTGGGTTGCGCCCTTGCATGTGAAGGGGCCTGCGCGGTGACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp CGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGCCGGCCGGGCGGCTCTGTCTGGGCTGCTaGGAGCTGCAACTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: RRACLWYGSSASGEPAGRLCLGC*ELQLRG
Trigger: ACCCCTCAGTTGCAGCTCCCAGCAGCCCAGACAGAG...CCGCCCGGCCGGCTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GGACCAGTCCCAGCCTCCTGCGGCGCGTGCCGCCGATTCACAGTGGAGCTCCCGCGGGGCAGGGGCTGGTaGTGCACCGTGAAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: GPVPASCGACRRFTVELPRGRGW*CTVKEG
Trigger: CCCCTCCTTCACGGTGCACCACCAGCCCCTGCCCCG...CGGGAGCTCCACTGTGAATCGGCGGCACGCGCCGCAGGAGGCTGGGACTGGTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457590.2
3UTR CAA 72 bp CGTGCCGCCGATTCACAGTGGAGCTCCCGTCCGTCCTaGCCTCTGCCGTCCAGGGGTGGGAGCCCGGCAGGC +
Preference number: 4 (lower is better)
Translates to: RAADSQWSSRPS*PLPSRGGSPAG
Trigger: GCCTGCCGGGCTCCCACCCCTGGACGGCAGAGGCAAGGACGGACGGGAGCTCCACTGTGAATCGGCGGCACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR TCA 90 bp CCAGGGCCAGATGCGGGGAGCTCAGACTCCCAGATCCCATCCTCCAGGGAGGGCCCGCCAAGGCCCCGCTaGTGGCCACCGAGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: PGPDAGSSDSQIPSSREGPPRPR*WPPSQR
Trigger: ACGCTGGCTCGGTGGCCATCAGCGGGGCCTTGGCGG...GCCCTCCCTGGAGGATGGGATCTGGGAGTCTGAGCTCCCCGCATCTGGCCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR TCA 90 bp TGGTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGCCGGCCAAGCCTTTCCTGGGGTaGGCGGCCAGCTTGGCATCG +
Preference number: 4 (lower is better)
Translates to: WWRRACLWYGSSASGEPAKPFLG*AASLAS
Trigger: CGATGCCAAGCTGGCCGCTCACCCCAGGAAAGGCTT...GGCCGGCTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR TCA 90 bp GTGGGAGCCCGGCAGGCCGGCGGGCACCATGCCGCGGGCGCGAGTTGGTCCACACGGCCGCCGCAGAGATaGAGAGGTTGTGGCCATTCT +
Preference number: 4 (lower is better)
Translates to: VGARQAGGHHAAGASWSTRPPQR*RGCGHS
Trigger: AGAATGGCCACAACCTCTTCATCTCTGCGGCGGCCG...TGTGGACCAACTCGCGCCCGCGGCATGGTGCCCGCCGGCCTGCCGGGCTCCCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR TCA 90 bp GGACCAGTCCCAGCCTCCTGCGGCGCGTGCCGCCGATTCACAGTGGAGCTCCCGTGCCAGGCGTGGCCCTaGCAGGAAGGGATGTGGGGC +
Preference number: 4 (lower is better)
Translates to: GPVPASCGACRRFTVELPCQAWP*QEGMWG
Trigger: GCCCCACATCCCTTCCTGTCAGGGCCACGCCTGGCA...CGGGAGCTCCACTGTGAATCGGCGGCACGCGCCGCAGGAGGCTGGGACTGGTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR TCA 90 bp TGGACCAGTCCCAGCCTCCTGCGGCGCGTGCCGCCGATTCACAGTGGAGCTCCCACCGAGGCCGGGGCCTaGAAGGAAGAGGCCGAGGCG +
Preference number: 4 (lower is better)
Translates to: WTSPSLLRRVPPIHSGAPTEAGA*KEEAEA
Trigger: CGCCTCGGCCTCTTCCTTTCAGGCCCCGGCCTCGGT...GGGAGCTCCACTGTGAATCGGCGGCACGCGCCGCAGGAGGCTGGGACTGGTCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457590.2
CDS-3UTR GCA 90 bp GCTCAGGCCGCGGGGAGGCCTCCGAGGAATGTGGTGGCGACGGGCCTGCCTTTGGCGGTCAGGGGGCTGTaGTTGCTGGAGGGCGACTGC +
Preference number: 4 (lower is better)
Translates to: AQAAGRPPRNVVATGLPLAVRGL*LLEGDC
Trigger: GCAGTCGCCCTCCAGCAAGCACAGCCCCCTGACCGC...CAAAGGCAGGCCCGTCGCCACCACATTCCTCGGAGGCCTCCCCGCGGCCTGAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp GCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGCAAGGGCGCAAGGGCGGAGCTGGCCTaGAGCGGGCTGTCCGCCGAC +
Preference number: 4 (lower is better)
Translates to: AAHGQLRHRAGPFTCKGARAELA*SGLSAD
Trigger: GTCGGCGGACAGCCCGCTGCAGGCCAGCTCCGCCCT...TGCGCCCTTGCATGTGAAGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp TCCTCACAGCACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCCCTCCTTGCCGCGGCTaGCCTCGCCCTTCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: SSQHHRAAHGQLRHRAGPPPCRG*PRPSAQ
Trigger: CTGGGCTGAAGGGCGAGGGCAGCCGCGGCAAGGAGG...GGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGTGCTGTGAGGA
71% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp CCTCCGAGGAATGTGGTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGCAGCGGACGACACGTaGACCAGGCCTGCGGCGGCC +
Preference number: 4 (lower is better)
Translates to: PPRNVVATGLPLVREQRVAADDT*TRPAAA
Trigger: GGCCGCCGCAGGCCTGGTGCACGTGTCGTCCGCTGC...GACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCACATTCCTCGGAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp CGTCACCGCGCAGGCCCCTTCACATGCAAGGGCGCAACCCACGCCCCGGAGGGTGACCCACGACAGGCCTaGCCCGCATCGCAGGGCATG +
Preference number: 4 (lower is better)
Translates to: RHRAGPFTCKGATHAPEGDPRQA*PASQGM
Trigger: CATGCCCTGCGATGCGGGGCAGGCCTGTCGTGGGTC...ACCCTCCGGGGCGTGGGTTGCGCCCTTGCATGTGAAGGGGCCTGCGCGGTGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp GGACCAGTCCCAGCCTCCTGCGGCGCGTGCCGCCGATTCACAGTGGAGCTCCCGGACCCACGACAGGCCTaGCCCGCATCGCAGGGCATG +
Preference number: 4 (lower is better)
Translates to: GPVPASCGACRRFTVELPDPRQA*PASQGM
Trigger: CATGCCCTGCGATGCGGGGCAGGCCTGTCGTGGGTC...CGGGAGCTCCACTGTGAATCGGCGGCACGCGCCGCAGGAGGCTGGGACTGGTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp TGGACCAGTCCCAGCCTCCTGCGGCGCGTGCCGCCGATTCACAGTGGAGCTCCCTGTGGCGCTGCCACATaGAGCCCCGCGGCCGACACG +
Preference number: 4 (lower is better)
Translates to: WTSPSLLRRVPPIHSGAPCGAAT*SPAADT
Trigger: CGTGTCGGCCGCGGGGCTGCATGTGGCAGCGCCACA...GGGAGCTCCACTGTGAATCGGCGGCACGCGCCGCAGGAGGCTGGGACTGGTCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457590.2
CDS-3UTR CCA 90 bp GGAGCCCGGCAGGCCGGCGGGCACCATGCCGCGGGCGCGAGTTGGTCCACACCGACCTGCTGCAGGATATaGCGCAGGAGTCCAGTGGAC +
Preference number: 4 (lower is better)
Translates to: GARQAGGHHAAGASWSTPTCCRI*RRSPVD
Trigger: GTCCACTGGACTCCTGCGCCATATCCTGCAGCAGGT...CGGTGTGGACCAACTCGCGCCCGCGGCATGGTGCCCGCCGGCCTGCCGGGCTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp TGGTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGCCGGCCTCTCCAGCGACAGCGTaGCCCAGTCCAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: WWRRACLWYGSSASGEPASPATA*PSPAAA
Trigger: AGCTGCAGCTGGACTGGGCCACGCTGTCGCTGGAGA...GGCCGGCTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp CCGGCGGGCACCATGCCGCGGGCGCGAGTTGGTCCACACCGTCCTTGCATAGGTCTGCCGGGCACCGTGTaGTCCTGGCTCAGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: PAGTMPRARVGPHRPCIGLPGTV*SWLRCR
Trigger: GCGGCACCTGAGCCAGGACCACACGGTGCCCGGCAG...ACCTATGCAAGGACGGTGTGGACCAACTCGCGCCCGCGGCATGGTGCCCGCCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGCCGGCCGGGCCTCGGGGCCCTTGTaGGGAAGAGAAGCACCATCA +
Preference number: 4 (lower is better)
Translates to: VATGLPLVREQRVGGAGRASGPL*GREAPS
Trigger: TGATGGTGCTTCTCTTCCCCACAAGGGCCCCGAGGC...CCGGCCGGCTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp CGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGCCGGCCGGGCGGAGTTGGTCAGTCTGGTaGCAGCGGACGACACGTGCA +
Preference number: 4 (lower is better)
Translates to: RRACLWYGSSASGEPAGRSWSVW*QRTTRA
Trigger: TGCACGTGTCGTCCGCTGCCACCAGACTGACCAACT...CCGCCCGGCCGGCTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp GGACCAGTCCCAGCCTCCTGCGGCGCGTGCCGCCGATTCACAGTGGAGCTCCCGCCATCGCGCAGCACATaGCCAGCTGCGTCACCGCGC +
Preference number: 4 (lower is better)
Translates to: GPVPASCGACRRFTVELPPSRST*PAASPR
Trigger: GCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGG...CGGGAGCTCCACTGTGAATCGGCGGCACGCGCCGCAGGAGGCTGGGACTGGTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp GAATGTGGTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGCGGCTCGGGCCCAGTGTaGCGCTGCCACATGCAGCCC +
Preference number: 4 (lower is better)
Translates to: ECGGDGPAFGTGAARRGSGSGPV*RCHMQP
Trigger: GGGCTGCATGTGGCAGCGCCACACTGGGCCCGAGCC...GCTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCACATTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457590.2
CDS-3UTR TCA 90 bp CGTCACCGCGCAGGCCCCTTCACATGCAAGGGCGCAACCCACGCCCCGGAGGGTCCACGCCCCGGAGGGTaGACAGTCTGGGGGTTCACA +
Preference number: 4 (lower is better)
Translates to: RHRAGPFTCKGATHAPEGPRPGG*TVWGFT
Trigger: TGTGAACCCCCAGACTGTTCACCCTCCGGGGCGTGG...ACCCTCCGGGGCGTGGGTTGCGCCCTTGCATGTGAAGGGGCCTGCGCGGTGACG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR TCA 90 bp CACAGGTCCCCGCCAGCTGCCCACGGAAACTCAGGCCAGGTGCCAGCACCAGGCGCAGGCTGCCTGTCCTaGAGGCCAGGCTCGGGGCTT +
Preference number: 4 (lower is better)
Translates to: HRSPPAAHGNSGQVPAPGAGCLS*RPGSGL
Trigger: AAGCCCCGAGCCTGGCCTTCAGGACAGGCAGCCTGC...GCCTGGTGCTGGCACCTGGCCTGAGTTTCCGTGGGCAGCTGGCGGGGACCTGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp AGGCAGGGGCGCCGGCAGCTCTGTCTGGGCTGCTGGGAGCTGCAACTGAGGGGTTGGCCGCGTTGCTCTTaGTCTCGCGCTGCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: RQGRRQLCLGCWELQLRGWPRCS*SRAAGG
Trigger: GCCGCCAGCAGCGCGAGAGCAAGAGCAACGCGGCCA...ACCCCTCAGTTGCAGCTCCCAGCAGCCCAGACAGAGCTGCCGGCGCCCCTGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp GTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGCCGGCCGGCTTCTTCACGGTGGCTaGTCCCGCCTTCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: VATGLPLVREQRVGGAGRLLHGG*SRLLFL
Trigger: GAGGAAGAGAAGGCGGGAGCAGCCACCGTGAAGAAG...CCGGCCGGCTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp GCTCAGGCCGCGGGGAGGCCTCCGAGGAATGTGGTGGCGACGGGCCTGCCTTTGTTGGGGGAGTGCCGCTaGACGCTCGGAGGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: AQAAGRPPRNVVATGLPLLGECR*TLGGSW
Trigger: CCAGCTACCTCCGAGCGTGCAGCGGCACTCCCCCAA...CAAAGGCAGGCCCGTCGCCACCACATTCCTCGGAGGCCTCCCCGCGGCCTGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp AGGCAGGGGCGCCGGCAGCTCTGTCTGGGCTGCTGGGAGCTGCAACTGAGGGGTAGGGCAGGTCTCCCTTaGTGGCCTCGGGCAACGGGC +
Preference number: 4 (lower is better)
Translates to: RQGRRQLCLGCWELQLRGRAGLP*WPRATG
Trigger: GCCCGTTGCCCGAGGCCAGCAAGGGAGACCTGCCCT...ACCCCTCAGTTGCAGCTCCCAGCAGCCCAGACAGAGCTGCCGGCGCCCCTGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp CACAGGTCCCCGCCAGCTGCCCACGGAAACTCAGGCCAGGTGCCAGCACCAGGCCTTGGGGGACACGCCTaGGCTCAAGCTGGGCGTCCC +
Preference number: 4 (lower is better)
Translates to: HRSPPAAHGNSGQVPAPGLGGHA*AQAGRP
Trigger: GGGACGCCCAGCTTGAGCGCAGGCGTGTCCCCCAAG...GCCTGGTGCTGGCACCTGGCCTGAGTTTCCGTGGGCAGCTGGCGGGGACCTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp TCCTCACAGCACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCGGGCCTTGGCGGCCTTaGCGCTCAGCAGTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: SSQHHRAAHGQLRHRAGPGPWRP*RSAVGS
Trigger: AGACCCCACTGCTGAGCGGCAAGGCCGCCAAGGCCC...GGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGTGCTGTGAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp GCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGCAAGGGCGCACCCAGGAAGGACCGGTaGGTCTGGGCGGAGGACGCC +
Preference number: 4 (lower is better)
Translates to: AAHGQLRHRAGPFTCKGAPRKDR*VWAEDA
Trigger: GGCGTCCTCCGCCCAGACGCACCGGTCCTTCCTGGG...TGCGCCCTTGCATGTGAAGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp AATGTGGTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGCCGAGCCGAGGTTGGCCTaGAGGGACATGGGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: NVVATGLPLVREQRVGGAEPRLA*RDMGPS
Trigger: GCTCGGCCCCATGTCCCTGCAGGCCAACCTCGGCTC...GGCTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCACATT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp GTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGCCGGCCGGGGTCCACACCGTCCTTaGATAGGTCTCGCGGTTGAG +
Preference number: 4 (lower is better)
Translates to: VATGLPLVREQRVGGAGRGPHRP*IGLAVE
Trigger: CTCAACCGCGAGACCTATGCAAGGACGGTGTGGACC...CCGGCCGGCTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp TCCTCACAGCACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCGTCCGTCCTTGCCTCTaGCGTCCAGGGGTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: SSQHHRAAHGQLRHRAGPVRPCL*RPGVGA
Trigger: GGCTCCCACCCCTGGACGGCAGAGGCAAGGACGGAC...GGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGTGCTGTGAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp CCGTCCTCACAGCACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCGTCCGTCCTTGCCTCTaGCGTCCAGGGGTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: PSSQHHRAAHGQLRHRAGVRPCL*RPGVGA
Trigger: GGCTCCCACCCCTGGACGGCAGAGGCAAGGACGGAC...GCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGTGCTGTGAGGACGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp GTCCTCACAGCACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCGCTCCCGTCCGTCCTTaGCTCTGCCGTCCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: VLTAPSRSTWPAASPRRPAPVRP*LCRPGV
Trigger: CACCCCTGGACGGCAGAGGCAAGGACGGACGGGAGC...GGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGTGCTGTGAGGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp CGGCAGGCCGGCGGGCACCATGCCGCGGGCGCGAGTTGGTCCACACCGTCCTTGGGACTCGGCCGTCTCTaGCATCAACCCTGTGGCGTA +
Preference number: 4 (lower is better)
Translates to: RQAGGHHAAGASWSTPSLGLGRL*HQPCGV
Trigger: TACGCCACAGGGTTGATGGCAGAGACGGCCGAGTCC...CAAGGACGGTGTGGACCAACTCGCGCCCGCGGCATGGTGCCCGCCGGCCTGCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp CAAACTGGACCAGTCCCAGCCTCCTGCGGCGCGTGCCGCCGATTCACAGTGGAGGGCCCAGTGTGGCGCTaGCACATGCAGCCCCGCGGC +
Preference number: 4 (lower is better)
Translates to: QTGPVPASCGACRRFTVEGPVWR*HMQPRG
Trigger: GCCGCGGGGCTGCATGTGGCAGCGCCACACTGGGCC...CTCCACTGTGAATCGGCGGCACGCGCCGCAGGAGGCTGGGACTGGTCCAGTTTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457590.2
CDS-3UTR CCA 90 bp GAGCACGTGAGTGGTGCTTCCCGACGTCCGTCAGCCGCCCGTGAGAGCCCGCCTAGCAGCTGCAAGCTCTaGCCGCGGAGCGCGCGGTTG +
Preference number: 4 (lower is better)
Translates to: EHVSGASRRPSAARESPPSSCKL*PRSARL
Trigger: CAACCGCGCGCTCCGCGGCCAGAGCTTGCAGCTGCT...AGGCGGGCTCTCACGGGCGGCTGACGGACGTCGGGAAGCACCACTCACGTGCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586024.1
CDS-3UTR CCA 90 bp TGGACCAGTCCCAGCCTCCTGCGGCGCGTGCCGCCGATTCACAGTGGAGCTCCCCAGGGCACCACCTCCTaGTCCAGGGGTGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: WTSPSLLRRVPPIHSGAPQGTTS*SRGEAR
Trigger: CCTGGCCTCACCCCTGGACCAGGAGGTGGTGCCCTG...GGGAGCTCCACTGTGAATCGGCGGCACGCGCCGCAGGAGGCTGGGACTGGTCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GTCCTCACAGCACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCGAAGGTGCAGCCGTTaGCAGGGTTGGTGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: VLTAPSRSTWPAASPRRPRRCSR*QGWCPG
Trigger: GCCCGGGCACCAACCCTGCCAACGGCTGCACCTTCG...GGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGTGCTGTGAGGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp GACCAGGGACTCGGCCGTCTCTGCCATCAACCCTGTGGCGTATCCGGCCCGTGGAGGCAGGCGCGGGCCTaGGGACGAGATAGCACCGGG +
Preference number: 4 (lower is better)
Translates to: DQGLGRLCHQPCGVSGPWRQARA*GRDSTG
Trigger: CCCGGTGCTATCTCGTCCCCAGGCCCGCGCCTGCCT...CCACGGGCCGGATACGCCACAGGGTTGATGGCAGAGACGGCCGAGTCCCTGGTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GGACCAGTCCCAGCCTCCTGCGGCGCGTGCCGCCGATTCACAGTGGAGCTCCCGCTGCCATCAACCCTGTaGCGTATCCGGCCCGTGGCG +
Preference number: 4 (lower is better)
Translates to: GPVPASCGACRRFTVELPLPSTL*RIRPVA
Trigger: CGCCACGGGCCGGATACGCCACAGGGTTGATGGCAG...CGGGAGCTCCACTGTGAATCGGCGGCACGCGCCGCAGGAGGCTGGGACTGGTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GGGAGCAGCTCGGGAGCACGTGAGTGGTGCTTCCCGACGTCCGTCAGCCGCCCGCTGGTGAGGCTCGCCTaGGCCACACACGTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: GSSSGAREWCFPTSVSRPLVRLA*ATHVRE
Trigger: CTCCCTCACGTGTGTGGCCCAGGCGAGCCTCACCAG...CGGGCGGCTGACGGACGTCGGGAAGCACCACTCACGTGCTCCCGAGCTGCTCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586024.1
CDS-3UTR TCA 90 bp CCGTCCTCACAGCACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCATCTGCAGGACCCGTaGTGGCACCCGGACTGCCAC +
Preference number: 4 (lower is better)
Translates to: PSSQHHRAAHGQLRHRAGHLQDP*WHPDCH
Trigger: GTGGCAGTCCGGGTGCCATCACGGGTCCTGCAGATG...GCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGTGCTGTGAGGACGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp GTCCTCACAGCACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCTGGGCGTGGCCGCGTTaGTCTTGCTCTCGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: VLTAPSRSTWPAASPRRPWAWPR*SCSRAA
Trigger: AGCAGCGCGAGAGCAAGAGCAACGCGGCCACGCCCA...GGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGTGCTGTGAGGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp GGAATGTGGTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGGACTCTAGAAGCTTCTaGAGCGCGGGCGGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: GMWWRRACLWYGSSASGEDSRSF*SAGGVG
Trigger: GCCCACCCCGCCCGCGCTGCAGAAGCTTCTAGAGTC...CTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCACATTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp CCTCCGAGGAATGTGGTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGTGGCCCAGTCCAGCTaGAGCTCCTCGCAGCGAGCC +
Preference number: 4 (lower is better)
Translates to: PPRNVVATGLPLVREQRVVAQSS*SSSQRA
Trigger: GGCTCGCTGCGAGGAGCTGCAGCTGGACTGGGCCAC...GACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCACATTCCTCGGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp GCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGCAAGGGCGCAGCTGTGGCGTGGAGCTaGGGGACCCCACGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: AAHGQLRHRAGPFTCKGAAVAWS*GTPRWQ
Trigger: TTGCCACCGTGGGGTCCCGCAGCTCCACGCCACAGC...TGCGCCCTTGCATGTGAAGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp ATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGCAAGGGGCCCCCGCCGAAGGTaGAGCCGTTGGCAGGGTTGG +
Preference number: 4 (lower is better)
Translates to: IAQHMASCVTAQAPSHARGPRRR*SRWQGW
Trigger: CCAACCCTGCCAACGGCTGCACCTTCGGCGGGGGCC...CCTTGCATGTGAAGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp ACAGGCCTGCCCCGCATCGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAAATCCTCCCCTGCCTCCTTaGCGCGGCTGCCCTCGCCCT +
Preference number: 4 (lower is better)
Translates to: TGLPRIAGHAASHGQPRNPPLPP*RGCPRP
Trigger: AGGGCGAGGGCAGCCGCGGCAAGGAGGCAGGGGAGG...ATTTCTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGATGCGGGGCAGGCCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp GAATGTGGTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGCGAGCTGAACAGCGACTaGAGCACGGAGGAGCCGGCC +
Preference number: 4 (lower is better)
Translates to: ECGGDGPAFGTGAARRGSELNSD*STEEPA
Trigger: GGCCGGCTCCTCCGTGCTGCAGTCGCTGTTCAGCTC...GCTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCACATTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp CAGGCGCGGGCCTGGGGACGAGATAGCACCGGGGCAGGCTGTGGCGAATCCGCTTCCAACTGTGCCGCCTaGCACCCCGGAAAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: QARAWGRDSTGAGCGESASNCAA*HPGKAA
Trigger: GGCAGCTTTTCCGGGGTGGCAGGCGGCACAGTTGGA...AGCGGATTCGCCACAGCCTGCCCCGGTGCTATCTCGTCCCCAGGCCCGCGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp GGCACCATGCCGCGGGCGCGAGTTGGTCCACACCGTCCTTGCATAGGTCTCGCGGCTCCCGTCCGTCCTTaGCTCTGCCGTCCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: GTMPRARVGPHRPCIGLAAPVRP*LCRPGV
Trigger: CACCCCTGGACGGCAGAGGCAAGGACGGACGGGAGC...CGCGAGACCTATGCAAGGACGGTGTGGACCAACTCGCGCCCGCGGCATGGTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp GACCAGGGACTCGGCCGTCTCTGCCATCAACCCTGTGGCGTATCCGGCCCGTGGGCCTCCTGCGGCGCGTaGCGCCGATTCACAGTGGAG +
Preference number: 4 (lower is better)
Translates to: DQGLGRLCHQPCGVSGPWASCGA*RRFTVE
Trigger: CTCCACTGTGAATCGGCGGCACGCGCCGCAGGAGGC...CCACGGGCCGGATACGCCACAGGGTTGATGGCAGAGACGGCCGAGTCCCTGGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp GCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGCAAGGGCGCAGCCTCCTGCGGCGCGTaGCGCCGATTCACAGTGGAG +
Preference number: 4 (lower is better)
Translates to: AAHGQLRHRAGPFTCKGAASCGA*RRFTVE
Trigger: CTCCACTGTGAATCGGCGGCACGCGCCGCAGGAGGC...TGCGCCCTTGCATGTGAAGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp CGGCAGGCCGGCGGGCACCATGCCGCGGGCGCGAGTTGGTCCACACCGTCCTTGCTGGCGGGCCCGCCCTaGAGACACGTGTCTTTATAT +
Preference number: 4 (lower is better)
Translates to: RQAGGHHAAGASWSTPSLLAGPP*RHVSLY
Trigger: ATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAG...CAAGGACGGTGTGGACCAACTCGCGCCCGCGGCATGGTGCCCGCCGGCCTGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp GGACCAGTCCCAGCCTCCTGCGGCGCGTGCCGCCGATTCACAGTGGAGCTCCCGCATCGCAGGGCATGCTaGGAGCCATGGACAGCCGAG +
Preference number: 4 (lower is better)
Translates to: GPVPASCGACRRFTVELPHRRAC*EPWTAE
Trigger: CTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGATG...CGGGAGCTCCACTGTGAATCGGCGGCACGCGCCGCAGGAGGCTGGGACTGGTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp GACCAGGGACTCGGCCGTCTCTGCCATCAACCCTGTGGCGTATCCGGCCCGTGGGTGGCCCTGCCTGCCTaGTACACCCCGGCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: DQGLGRLCHQPCGVSGPWVALPA*YTPASA
Trigger: AGCTGAGGCCGGGGTGTAGCAGGCAGGCAGGGCCAC...CCACGGGCCGGATACGCCACAGGGTTGATGGCAGAGACGGCCGAGTCCCTGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp GCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGCAAGGGCGCAAGGGACGCGAGGCTCTaGAGAAGCGCGGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: AAHGQLRHRAGPFTCKGARDARL*RSAGSG
Trigger: CCCTGAGCCCGCGCTTCTGCAGAGCCTCGCGTCCCT...TGCGCCCTTGCATGTGAAGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457590.2
CDS-3UTR GCA 90 bp TCCTCACAGCACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCCATAGGGAGGCGGCATaGCGAGGGACACCCACACCG +
Preference number: 4 (lower is better)
Translates to: SSQHHRAAHGQLRHRAGPHREAA*RGTPTP
Trigger: CGGTGTGGGTGTCCCTCGGCATGCCGCCTCCCTATG...GGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGTGCTGTGAGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457590.2
CDS-3UTR CCA 90 bp GGAATGTGGTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGGGCGCAGGAGTCCAGTaGACGGCCGCGTGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: GMWWRRACLWYGSSASGEGAGVQ*TAACSA
Trigger: AGCTGAACACGCGGCCGTCCACTGGACTCCTGCGCC...CTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCACATTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGCCGGCCGGAGGCTGGCCTTGTACTaGGGGGTCTTTGTGTATGCC +
Preference number: 4 (lower is better)
Translates to: VATGLPLVREQRVGGAGRRLALY*GVFVYA
Trigger: GGCATACACAAAGACCCCCCAGTACAAGGCCAGCCT...CCGGCCGGCTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp CCCACCCACAGTCAGCAGCAGCAGCACAGGTCCCCGCCAGCTGCCCACGGAAACGCTGCAGCACGGGACTaGGGGTGCTCCTCGCCCTCT +
Preference number: 4 (lower is better)
Translates to: PTHSQQQQHRSPPAAHGNAAARD*GCSSPS
Trigger: AGAGGGCGAGGAGCACCCCCAGTCCCGTGCTGCAGC...GTTTCCGTGGGCAGCTGGCGGGGACCTGTGCTGCTGCTGCTGACTGTGGGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp CCGGCGGGCACCATGCCGCGGGCGCGAGTTGGTCCACACCGTCCTTGCATAGGTCGACTGTCCTGCCCGTaGCTCGGCACACAGTCCCCA +
Preference number: 4 (lower is better)
Translates to: PAGTMPRARVGPHRPCIGRLSCP*LGTQSP
Trigger: TGGGGACTGTGTGCCGAGCCACGGGCAGGACAGTCG...ACCTATGCAAGGACGGTGTGGACCAACTCGCGCCCGCGGCATGGTGCCCGCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp TGGACCAGTCCCAGCCTCCTGCGGCGCGTGCCGCCGATTCACAGTGGAGCTCCCGGCTGTCCGCCGACTTaGCCAGGCCGATGTCGGAGA +
Preference number: 4 (lower is better)
Translates to: WTSPSLLRRVPPIHSGAPGCPPT*PGRCRR
Trigger: TCTCCGACATCGGCCTGGCCAAGTCGGCGGACAGCC...GGGAGCTCCACTGTGAATCGGCGGCACGCGCCGCAGGAGGCTGGGACTGGTCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp AATGTGGTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGCCGGTGAGCGGCCAGCTTaGCATCGGCAGAGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: NVVATGLPLVREQRVGGAGERPA*HRQRAP
Trigger: AGGAGCCCTCTGCCGATGCCAAGCTGGCCGCTCACC...GGCTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCACATT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp GCTCAGGCCGCGGGGAGGCCTCCGAGGAATGTGGTGGCGACGGGCCTGCCTTTGCGGGAAAGCCTTTCCTaGGGTGAGCGGCCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: AQAAGRPPRNVVATGLPLRESLS*GERPAW
Trigger: CCAAGCTGGCCGCTCACCCCAGGAAAGGCTTTCCCG...CAAAGGCAGGCCCGTCGCCACCACATTCCTCGGAGGCCTCCCCGCGGCCTGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp CCAGTGGCTCTGAGACCCAGTGCGTGTCCTGAACATACGGTGGCCTGCGTGGGCAAGGACCGGTGCGTCTaGGCGGAGGACGCCGCGCCG +
Preference number: 4 (lower is better)
Translates to: PVALRPSACPEHTVACVGKDRCV*AEDAAP
Trigger: CGGCGCGGCGTCCTCCGCCCAGACGCACCGGTCCTT...GCCCACGCAGGCCACCGTATGTTCAGGACACGCACTGGGTCTCAGAGCCACTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp CCGTCCTCACAGCACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCGCCGCGGGCGCGAGTTaGTCCACACCGTCCTTGCAT +
Preference number: 4 (lower is better)
Translates to: PSSQHHRAAHGQLRHRAGAAGAS*STPSLH
Trigger: ATGCAAGGACGGTGTGGACCAACTCGCGCCCGCGGC...GCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGTGCTGTGAGGACGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp CGTCACCGCGCAGGCCCCTTCACATGCAAGGGCGCAACCCACGCCCCGGAGGGTCTCCGAGGAATGTGGTaGCGACGGGCCTGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: RHRAGPFTCKGATHAPEGLRGMW*RRACLW
Trigger: CCAAAGGCAGGCCCGTCGCCACCACATTCCTCGGAG...ACCCTCCGGGGCGTGGGTTGCGCCCTTGCATGTGAAGGGGCCTGCGCGGTGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp TCCTCACAGCACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCGGCCTCCGAGGAATGTaGTGGCGACGGGCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: SSQHHRAAHGQLRHRAGPGLRGM*WRRACL
Trigger: AAGGCAGGCCCGTCGCCACCACATTCCTCGGAGGCC...GGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGTGCTGTGAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp CCAGGGCCAGATGCGGGGAGCTCAGACTCCCAGATCCCATCCTCCAGGGAGGGCCCATCGCGCAGCACATaGCCAGCTGCGTCACCGCGC +
Preference number: 4 (lower is better)
Translates to: PGPDAGSSDSQIPSSREGPSRST*PAASPR
Trigger: GCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGG...GCCCTCCCTGGAGGATGGGATCTGGGAGTCTGAGCTCCCCGCATCTGGCCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp AGAGCGTGTGGCCTGGAAGTGCACAGGAGCCGGGCATGGCGGGCGACACTCACCCACAGGAGCCGGGCATaGCGGGCGACACTCACCGCT +
Preference number: 4 (lower is better)
Translates to: RACGLEVHRSRAWRATLTHRSRA*RATLTA
Trigger: AGCGGTGAGTGTCGCCCGCCATGCCCGGCTCCTGTG...GGTGAGTGTCGCCCGCCATGCCCGGCTCCTGTGCACTTCCAGGCCACACGCTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478937.3
3UTR CAA 72 bp CCGGCCGGGCGGCGTTTCCGAGAACGGGGTTCGGCGTaGTCAGCGTCTAGTCAGCACCAAGCGGGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: PAGRRFRERGSA*SASSQHQAGGG
Trigger: GCCTCCACCCGCTTGGTGCTGACTAGACGCTGACAACGCCGAACCCCGTTCTCGGAAACGCCGCCCGGCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR TCA 90 bp TGTCTGGGCTGCTGGGAGCTGCAACTGAGGGGTCTAGGGTCGGGGCTGACGCTGAGGGGCCGCGGGTCCTaGGGGCTCAGCTTCATGCTG +
Preference number: 4 (lower is better)
Translates to: CLGCWELQLRGLGSGLTLRGRGS*GLSFML
Trigger: CAGCATGAAGCTGAGCCCTCAGGACCCGCGGCCCCT...CAGCGTCAGCCCCGACCCTAGACCCCTCAGTTGCAGCTCCCAGCAGCCCAGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR TCA 90 bp GTCCTCACAGCACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCTGGCCAGGGGAATGCTaGCCGGGAGCTTGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: VLTAPSRSTWPAASPRRPWPGEC*PGACWA
Trigger: AGCCCAACAAGCTCCCGGTCAGCATTCCCCTGGCCA...GGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGTGCTGTGAGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR TCA 90 bp TCCTCACAGCACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCACCCCGAAGGCTGTGTaGAAAGGCCAGCGACGGACG +
Preference number: 4 (lower is better)
Translates to: SSQHHRAAHGQLRHRAGPTPKAV*KGQRRT
Trigger: CGTCCGTCGCTGGCCTTTTCACACAGCCTTCGGGGT...GGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGTGCTGTGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR TCA 90 bp AATGTGGTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGCCGCTCCTCGTCTGAGGTaGGTGGGGAGTAGTGTGCCC +
Preference number: 4 (lower is better)
Translates to: NVVATGLPLVREQRVGGAAPRLR*VGSSVP
Trigger: GGGCACACTACTCCCCACTCACCTCAGACGAGGAGC...GGCTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCACATT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR TCA 90 bp CCGGCGGGCACCATGCCGCGGGCGCGAGTTGGTCCACACCGTCCTTGCATAGGTAAGCCTTTCCTGGGGTaGGCGGCCAGCTTGGCATCG +
Preference number: 4 (lower is better)
Translates to: PAGTMPRARVGPHRPCIGKPFLG*AASLAS
Trigger: CGATGCCAAGCTGGCCGCTCACCCCAGGAAAGGCTT...ACCTATGCAAGGACGGTGTGGACCAACTCGCGCCCGCGGCATGGTGCCCGCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR TCA 90 bp AATGTGGTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGCCGGTTGTGGCCATTCTTaGGGTCGACCTCGCGGTCCC +
Preference number: 4 (lower is better)
Translates to: NVVATGLPLVREQRVGGAGCGHS*GRPRGP
Trigger: GGGACCGCGAGGTCGACCTCAAGAATGGCCACAACC...GGCTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCACATT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR TCA 90 bp CCCACCCACAGTCAGCAGCAGCAGCACAGGTCCCCGCCAGCTGCCCACGGAAACTGGAGGGTGGGGGTCTaGGAGGTTGTTGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PTHSQQQQHRSPPAAHGNWRVGV*EVVGGW
Trigger: CCAGCCCCCAACAACCTCTCAGACCCCCACCCTCCA...GTTTCCGTGGGCAGCTGGCGGGGACCTGTGCTGCTGCTGCTGACTGTGGGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR TCA 90 bp CAAACTGGACCAGTCCCAGCCTCCTGCGGCGCGTGCCGCCGATTCACAGTGGAGCGGGCTCCAAACGGATaGGCAGAGGCGGAGGGCACC +
Preference number: 4 (lower is better)
Translates to: QTGPVPASCGACRRFTVERAPNG*AEAEGT
Trigger: GGTGCCCTCCGCCTCTGCTCATCCGTTTGGAGCCCG...CTCCACTGTGAATCGGCGGCACGCGCCGCAGGAGGCTGGGACTGGTCCAGTTTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457590.2
CDS-3UTR GCA 90 bp CGGCAGGCCGGCGGGCACCATGCCGCGGGCGCGAGTTGGTCCACACCGTCCTTGCTTGGCCGGGATGTCTaGTTTCTCGACGCCATAGTG +
Preference number: 4 (lower is better)
Translates to: RQAGGHHAAGASWSTPSLLGRDV*FLDAIV
Trigger: CACTATGGCGTCGAGAAAGCAGACATCCCGGCCAAG...CAAGGACGGTGTGGACCAACTCGCGCCCGCGGCATGGTGCCCGCCGGCCTGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp GGAGCCCGGCAGGCCGGCGGGCACCATGCCGCGGGCGCGAGTTGGTCCACACCGTGTTTAGCTTCTTCTTaGGGGCTTTGGAGGGAGACG +
Preference number: 4 (lower is better)
Translates to: GARQAGGHHAAGASWSTPCLASS*GLWRET
Trigger: CGTCTCCCTCCAAAGCCCGCAAGAAGAAGCTAAACA...CGGTGTGGACCAACTCGCGCCCGCGGCATGGTGCCCGCCGGCCTGCCGGGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp CCAGTGGCTCTGAGACCCAGTGCGTGTCCTGAACATACGGTGGCCTGCGTGGGCTGGGGCGCCCGCGCTTaGGGCCAGCCATCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: PVALRPSACPEHTVACVGWGARA*GQPSSS
Trigger: GGAGGAAGATGGCTGGCCGCAAGCGCGGGCGCCCCA...GCCCACGCAGGCCACCGTATGTTCAGGACACGCACTGGGTCTCAGAGCCACTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp CCTCCGAGGAATGTGGTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCAGCGCGCGGTTGTCCTaGTCCAGCTGCTCCGACTGC +
Preference number: 4 (lower is better)
Translates to: PPRNVVATGLPLVREQRVSARLS*SSCSDC
Trigger: GCAGTCGGAGCAGCTGGAGCAGGACAACCGCGCGCT...GACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCACATTCCTCGGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp GGCAGGCGCGGGCCTGGGGACGAGATAGCACCGGGGCAGGCTGTGGCGAATCCGTCCAGGCAGTGCCTCTaGTTCTCCGAGATCTGGCTC +
Preference number: 4 (lower is better)
Translates to: GRRGPGDEIAPGQAVANPSRQCL*FSEIWL
Trigger: GAGCCAGATCTCGGAGAAGCAGAGGCACTGCCTGGA...CGGATTCGCCACAGCCTGCCCCGGTGCTATCTCGTCCCCAGGCCCGCGCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp ACAGGCCTGCCCCGCATCGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAAATCACTGGCAGCCGGCCTaGCGGGCACCGTGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: TGLPRIAGHAASHGQPRNHWQPA*RAPCGP
Trigger: AGGACCACACGGTGCCCGGCAGGCCGGCTGCCAGTG...ATTTCTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGATGCGGGGCAGGCCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp CACAGGTCCCCGCCAGCTGCCCACGGAAACTCAGGCCAGGTGCCAGCACCAGGCTCAGGGGGCTGTGCTTaGTGGAGGGCGACTGCTTGG +
Preference number: 4 (lower is better)
Translates to: HRSPPAAHGNSGQVPAPGSGGCA*WRATAW
Trigger: CCAAGCAGTCGCCCTCCAGCAAGCACAGCCCCCTGA...GCCTGGTGCTGGCACCTGGCCTGAGTTTCCGTGGGCAGCTGGCGGGGACCTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp GGCAGGCGCGGGCCTGGGGACGAGATAGCACCGGGGCAGGCTGTGGCGAATCCGAAGCTGCCCATGGCGTaGGAGTTGGTCAGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: GRRGPGDEIAPGQAVANPKLPMA*ELVSLV
Trigger: CACCAGACTGACCAACTCGCACGCCATGGGCAGCTT...CGGATTCGCCACAGCCTGCCCCGGTGCTATCTCGTCCCCAGGCCCGCGCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp CCGTCCTCACAGCACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCGCCAGGTTTCAGCAGTaGACCCTGGCCCCAGCACAC +
Preference number: 4 (lower is better)
Translates to: PSSQHHRAAHGQLRHRAGARFQQ*TLAPAH
Trigger: GTGTGCTGGGGCCAGGGTGCACTGCTGAAACCTGGC...GCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGTGCTGTGAGGACGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp GCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGCAAGGGCGCACAGCCCAGGGCCAGATaGGGGGAGCTCAGACTCCCA +
Preference number: 4 (lower is better)
Translates to: AAHGQLRHRAGPFTCKGAQPRAR*GELRLP
Trigger: TGGGAGTCTGAGCTCCCCGCATCTGGCCCTGGGCTG...TGCGCCCTTGCATGTGAAGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp ACAGGCCTGCCCCGCATCGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAAATAGAGGAAGGGGCGCCTaGAGCCCAGGGGCGGACCGT +
Preference number: 4 (lower is better)
Translates to: TGLPRIAGHAASHGQPRNRGRGA*SPGADR
Trigger: ACGGTCCGCCCCTGGGCTGCAGGCGCCCCTTCCTCT...ATTTCTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGATGCGGGGCAGGCCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp GAATGTGGTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGCATGCTCTGGTGGCCCTaGGCACGGTGGCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: ECGGDGPAFGTGAARRGSMLWWP*ARWPSP
Trigger: TGGAGAAGGCCACCGTGCGCAGGGCCACCAGAGCAT...GCTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCACATTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457590.2
CDS-3UTR GCA 90 bp GCAGCTCGGGAGCACGTGAGTGGTGCTTCCCGACGTCCGTCAGCCGCCCGTGAGGGAGCACGTGAGTGGTaGTTCCCGACGTCCGTCAGC +
Preference number: 4 (lower is better)
Translates to: AAREHVSGASRRPSAAREGAREW*FPTSVS
Trigger: GCTGACGGACGTCGGGAAGCACCACTCACGTGCTCC...CTCACGGGCGGCTGACGGACGTCGGGAAGCACCACTCACGTGCTCCCGAGCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586024.1
CDS-3UTR CCA 90 bp GCTCGGGAGCACGTGAGTGGTGCTTCCCGACGTCCGTCAGCCGCCCGTGAGAGCTCTCCAGCGACAGCGTaGCCCAGTCCAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: AREHVSGASRRPSAARESSPATA*PSPAAA
Trigger: AGCTGCAGCTGGACTGGGCCACGCTGTCGCTGGAGA...GCTCTCACGGGCGGCTGACGGACGTCGGGAAGCACCACTCACGTGCTCCCGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586024.1
CDS-3UTR CCA 90 bp CGGCAGGCCGGCGGGCACCATGCCGCGGGCGCGAGTTGGTCCACACCGTCCTTGTGCTTCTCCGAGATCTaGCTCTTCAGGGCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: RQAGGHHAAGASWSTPSLCFSEI*LFRACF
Trigger: GAAGCAGGCCCTGAAGAGCCAGATCTCGGAGAAGCA...CAAGGACGGTGTGGACCAACTCGCGCCCGCGGCATGGTGCCCGCCGGCCTGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GCTCAGGCCGCGGGGAGGCCTCCGAGGAATGTGGTGGCGACGGGCCTGCCTTTGGGCCGATGTCGGAGATaGGCGAGAAGGTGGACTTCC +
Preference number: 4 (lower is better)
Translates to: AQAAGRPPRNVVATGLPLGRCRR*ARRWTS
Trigger: GGAAGTCCACCTTCTCGCCCATCTCCGACATCGGCC...CAAAGGCAGGCCCGTCGCCACCACATTCCTCGGAGGCCTCCCCGCGGCCTGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp TGTCTGGGCTGCTGGGAGCTGCAACTGAGGGGTCTAGGGTCGGGGCTGACGCTGCCACGGAGCCGAGGTTaGCCTGCAGGGACATGGGGC +
Preference number: 4 (lower is better)
Translates to: CLGCWELQLRGLGSGLTLPRSRG*PAGTWG
Trigger: GCCCCATGTCCCTGCAGGCCAACCTCGGCTCCGTGG...CAGCGTCAGCCCCGACCCTAGACCCCTCAGTTGCAGCTCCCAGCAGCCCAGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GGCAGGCGCGGGCCTGGGGACGAGATAGCACCGGGGCAGGCTGTGGCGAATCCGCGGAAAAGCTGCCCATaGCGTGCGAGTTGGTCAGTC +
Preference number: 4 (lower is better)
Translates to: GRRGPGDEIAPGQAVANPRKSCP*RASWSV
Trigger: GACTGACCAACTCGCACGCCATGGGCAGCTTTTCCG...CGGATTCGCCACAGCCTGCCCCGGTGCTATCTCGTCCCCAGGCCCGCGCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp GGCACCATGCCGCGGGCGCGAGTTGGTCCACACCGTCCTTGCATAGGTCTCGCGGCCGCGGGCGCGAGTTaGTCCACACCGTCCTTGCAT +
Preference number: 4 (lower is better)
Translates to: GTMPRARVGPHRPCIGLAAAGAS*STPSLH
Trigger: ATGCAAGGACGGTGTGGACCAACTCGCGCCCGCGGC...CGCGAGACCTATGCAAGGACGGTGTGGACCAACTCGCGCCCGCGGCATGGTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp ACAGTCAGCAGCAGCAGCACAGGTCCCCGCCAGCTGCCCACGGAAACTCAGGCCCGACGGGCCTGCCTTTaGTACGGGAGCAGCGCGTCG +
Preference number: 4 (lower is better)
Translates to: TVSSSSTGPRQLPTETQARRACL*YGSSAS
Trigger: CGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCG...GGCCTGAGTTTCCGTGGGCAGCTGGCGGGGACCTGTGCTGCTGCTGCTGACTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp TGGACCAGTCCCAGCCTCCTGCGGCGCGTGCCGCCGATTCACAGTGGAGCTCCCCTCCGAGGAATGTGGTaGCGACGGGCCTGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: WTSPSLLRRVPPIHSGAPLRGMW*RRACLW
Trigger: CCAAAGGCAGGCCCGTCGCCACCACATTCCTCGGAG...GGGAGCTCCACTGTGAATCGGCGGCACGCGCCGCAGGAGGCTGGGACTGGTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp GCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGCAAGGGCGCAGGCCTCCGAGGAATGTaGTGGCGACGGGCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: AAHGQLRHRAGPFTCKGAGLRGM*WRRACL
Trigger: AAGGCAGGCCCGTCGCCACCACATTCCTCGGAGGCC...TGCGCCCTTGCATGTGAAGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp CCCACAGCAGCTGGGAGAACCAGCACAGGCTCCAAGGGATGGGTGCCAGGCGTGGCCAAGGCTGCAGAGTaGGGGGCCGACGTCACCCTG +
Preference number: 4 (lower is better)
Translates to: PTAAGRTSTGSKGWVPGVAKAAE*GADVTL
Trigger: CAGGGTGACGTCGGCCCCCCACTCTGCAGCCTTGGC...CACGCCTGGCACCCATCCCTTGGAGCCTGTGCTGGTTCTCCCAGCTGCTGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GTGGGAGCCCGGCAGGCCGGCGGGCACCATGCCGCGGGCGCGAGTTGGTCCACAAAGCACTTGAGAAGGTaGGCTCAGCAAGTGCCACAC +
Preference number: 4 (lower is better)
Translates to: VGARQAGGHHAAGASWSTKHLRR*AQQVPH
Trigger: GTGTGGCACTTGCTGAGCCCACCTTCTCAAGTGCTT...TGTGGACCAACTCGCGCCCGCGGCATGGTGCCCGCCGGCCTGCCGGGCTCCCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp CCTCCGAGGAATGTGGTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCAGCACCAACGTGGGGTaGGGAGGGCACTGGGCACCA +
Preference number: 4 (lower is better)
Translates to: PPRNVVATGLPLVREQRVSTNVG*GGHWAP
Trigger: TGGTGCCCAGTGCCCTCCCCACCCCACGTTGGTGCT...GACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCACATTCCTCGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp CCAGGGCCAGATGCGGGGAGCTCAGACTCCCAGATCCCATCCTCCAGGGAGGGCCTGAGAGCACCAACGTaGGGTGGGGAGGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: PGPDAGSSDSQIPSSREGLRAPT*GGEGTG
Trigger: CCCAGTGCCCTCCCCACCCCACGTTGGTGCTCTCAG...GCCCTCCCTGGAGGATGGGATCTGGGAGTCTGAGCTCCCCGCATCTGGCCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp CCGGCGGGCACCATGCCGCGGGCGCGAGTTGGTCCACACCGTCCTTGCATAGGTACTGTGCGTGCCTCATaGGCCGAGGAGGGGGTATCC +
Preference number: 4 (lower is better)
Translates to: PAGTMPRARVGPHRPCIGTVRAS*AEEGVS
Trigger: GGATACCCCCTCCTCGGCCCATGAGGCACGCACAGT...ACCTATGCAAGGACGGTGTGGACCAACTCGCGCCCGCGGCATGGTGCCCGCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR TCA 90 bp ACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGCAACAGGGAGTTCTGGCTaGGGGCGGAGCTGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: TIAQHMASCVTAQAPSHATGSSG*GRSWPA
Trigger: TGCAGGCCAGCTCCGCCCTCAGCCAGAACTCCCTGT...TGCATGTGAAGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR TCA 90 bp ATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGCAAGGACAGGGAGTTCTGGCTaGGGGCGGAGCTGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: IAQHMASCVTAQAPSHARTGSSG*GRSWPA
Trigger: TGCAGGCCAGCTCCGCCCTCAGCCAGAACTCCCTGT...CCTTGCATGTGAAGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR TCA 90 bp AGGCAGGGGCGCCGGCAGCTCTGTCTGGGCTGCTGGGAGCTGCAACTGAGGGGTCACGTGGTAGGGATGTaGCGTGTGTCCATCCTGCCC +
Preference number: 4 (lower is better)
Translates to: RQGRRQLCLGCWELQLRGHVVGM*RVSILP
Trigger: GGGCAGGATGGACACACGTCACATCCCTACCACGTG...ACCCCTCAGTTGCAGCTCCCAGCAGCCCAGACAGAGCTGCCGGCGCCCCTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR TCA 90 bp CGCCGATTCACAGTGGAGCTCCCGTCCGTCCTTGCCTCTGCCGTCCAGGGGTGGCCCAGGGGCGGACCGTaGCAATGCGCGCAATCCAAA +
Preference number: 4 (lower is better)
Translates to: RRFTVELPSVLASAVQGWPRGGP*QCAQSK
Trigger: TTTGGATTGCGCGCATTGTCACGGTCCGCCCCTGGG...CCACCCCTGGACGGCAGAGGCAAGGACGGACGGGAGCTCCACTGTGAATCGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp CCGGCGGGCACCATGCCGCGGGCGCGAGTTGGTCCACACCGTCCTTGCATAGGTAGAGCTCCGGGCTCATaGTGCTCAAGTGAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: PAGTMPRARVGPHRPCIGRAPGS*CSSEAA
Trigger: CGCTGCCTCACTTGAGCAGCATGAGCCCGGAGCTCT...ACCTATGCAAGGACGGTGTGGACCAACTCGCGCCCGCGGCATGGTGCCCGCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp TGGACCAGTCCCAGCCTCCTGCGGCGCGTGCCGCCGATTCACAGTGGAGCTCCCTACTGGGGCGTGTTCTaGTTCGACGAAGGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: WTSPSLLRRVPPIHSGAPYWGVF*FDEGRL
Trigger: GAGCCGGCCTTCGTCGAAGCAGAACACGCCCCAGTA...GGGAGCTCCACTGTGAATCGGCGGCACGCGCCGCAGGAGGCTGGGACTGGTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp GCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGCAAGGGCGCAGGCTCAGCTTCATGCTaGCAGGCACGCTGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: AAHGQLRHRAGPFTCKGAGSASC*QARWGS
Trigger: AGAGCCCCAGCGTGCCTGGCAGCATGAAGCTGAGCC...TGCGCCCTTGCATGTGAAGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp CGTCACCGCGCAGGCCCCTTCACATGCAAGGGCGCAACCCACGCCCCGGAGGGTCGTCCAGCTGCCTCTTaGTCAGGAAAGGGTTGGCGT +
Preference number: 4 (lower is better)
Translates to: RHRAGPFTCKGATHAPEGRPAAS*SGKGWR
Trigger: ACGCCAACCCTTTCCTGAGCAAGAGGCAGCTGGACG...ACCCTCCGGGGCGTGGGTTGCGCCCTTGCATGTGAAGGGGCCTGCGCGGTGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp ACAGGCCCAGGGCTCAGAACAGGAGGGTGTCCGCAGGCAGCCACCACACTAGTTCCTCCTTGCCGCGGCTaGCCTCGCCCTTCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: TGPGLRTGGCPQAATTLVPPCRG*PRPSAQ
Trigger: CTGGGCTGAAGGGCGAGGGCAGCCGCGGCAAGGAGG...AACTAGTGTGGTGGCTGCCTGCGGACACCCTCCTGTTCTGAGCCCTGGGCCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp CCTCCGAGGAATGTGGTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCCCACCCCGGAAAAGCTaGCCATGGCGTGCGAGTTGG +
Preference number: 4 (lower is better)
Translates to: PPRNVVATGLPLVREQRVPPRKS*PWRASW
Trigger: CCAACTCGCACGCCATGGGCAGCTTTTCCGGGGTGG...GACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCACATTCCTCGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp ACAGGCCCAGGGCTCAGAACAGGAGGGTGTCCGCAGGCAGCCACCACACTAGTTCCAGTCCCAGCCTCCTaGGGCGCGTGCCGCCGATTC +
Preference number: 4 (lower is better)
Translates to: TGPGLRTGGCPQAATTLVPVPAS*GACRRF
Trigger: GAATCGGCGGCACGCGCCGCAGGAGGCTGGGACTGG...AACTAGTGTGGTGGCTGCCTGCGGACACCCTCCTGTTCTGAGCCCTGGGCCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp GGCACCATGCCGCGGGCGCGAGTTGGTCCACACCGTCCTTGCATAGGTCTCGCGCATCGCAGGGCATGCTaGGAGCCATGGACAGCCGAG +
Preference number: 4 (lower is better)
Translates to: GTMPRARVGPHRPCIGLAHRRAC*EPWTAE
Trigger: CTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGATG...CGCGAGACCTATGCAAGGACGGTGTGGACCAACTCGCGCCCGCGGCATGGTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp ACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGCACCGCATCGCAGGGCATaGTGCGAGCCATGGACAGCC +
Preference number: 4 (lower is better)
Translates to: TIAQHMASCVTAQAPSHAPHRRA*CEPWTA
Trigger: GGCTGTCCATGGCTCGCAGCATGCCCTGCGATGCGG...TGCATGTGAAGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp CCCACCCACAGTCAGCAGCAGCAGCACAGGTCCCCGCCAGCTGCCCACGGAAACTGCAGAATGCAGGGGTaGCCAGAGGAAGGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: PTHSQQQQHRSPPAAHGNCRMQG*PEEGAP
Trigger: AGGCGCCCCTTCCTCTGGGCACCCCTGCATTCTGCA...GTTTCCGTGGGCAGCTGGCGGGGACCTGTGCTGCTGCTGCTGACTGTGGGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp GAGCACGTGAGTGGTGCTTCCCGACGTCCGTCAGCCGCCCGTGAGAGCCCGCCTCTCCGGGGACAGCCTTaGAGCAACGGTTTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: EHVSGASRRPSAARESPPLRGQP*SNGLVQ
Trigger: CTGCACCAAACCGTTGCTGCAAGGCTGTCCCCGGAG...AGGCGGGCTCTCACGGGCGGCTGACGGACGTCGGGAAGCACCACTCACGTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586024.1
CDS-3UTR CCA 90 bp CGTCACCGCGCAGGCCCCTTCACATGCAAGGGCGCAACCCACGCCCCGGAGGGTGTGCCCTTCCACAGCTaGTGGATGCTGTCGATGGCA +
Preference number: 4 (lower is better)
Translates to: RHRAGPFTCKGATHAPEGVPFHS*WMLSMA
Trigger: TGCCATCGACAGCATCCACCAGCTGTGGAAGGGCAC...ACCCTCCGGGGCGTGGGTTGCGCCCTTGCATGTGAAGGGGCCTGCGCGGTGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GAATGTGGTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGCGCTTCATGGGCTGCGTaGTGCCCTTCCACAGCTGGT +
Preference number: 4 (lower is better)
Translates to: ECGGDGPAFGTGAARRGSASWAA*CPSTAG
Trigger: ACCAGCTGTGGAAGGGCACCACGCAGCCCATGAAGC...GCTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCACATTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GAGGGAGCAGCTCGGGAGCACGTGAGTGGTGCTTCCCGACGTCCGTCAGCCGCCTGCTCCCGCAGCTGCTaGTTATGGGCGGAGATCTCC +
Preference number: 4 (lower is better)
Translates to: EGAAREHVSGASRRPSAACSRSC*LWAEIS
Trigger: GGAGATCTCCGCCCATAACCAGCAGCTGCGGGAGCA...GGCGGCTGACGGACGTCGGGAAGCACCACTCACGTGCTCCCGAGCTGCTCCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586024.1
CDS-3UTR CCA 90 bp CCGTCCTCACAGCACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCTGTGCCCCATTGGTCTaGCTCAGAGGCCGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PSSQHHRAAHGQLRHRAGCAPLV*LRGRSF
Trigger: GAAGGAGCGGCCTCTGAGCCAGACCAATGGGGCACA...GCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGTGCTGTGAGGACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp CCGGCGGGCACCATGCCGCGGGCGCGAGTTGGTCCACACCGTCCTTGCATAGGTGGCCGATGTCGGAGATaGGCGAGAAGGTGGACTTCC +
Preference number: 4 (lower is better)
Translates to: PAGTMPRARVGPHRPCIGGRCRR*ARRWTS
Trigger: GGAAGTCCACCTTCTCGCCCATCTCCGACATCGGCC...ACCTATGCAAGGACGGTGTGGACCAACTCGCGCCCGCGGCATGGTGCCCGCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp TGTCTGGGCTGCTGGGAGCTGCAACTGAGGGGTCTAGGGTCGGGGCTGACGCTGGGTGAGCGGCCAGCTTaGCATCGGCAGAGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: CLGCWELQLRGLGSGLTLGERPA*HRQRAP
Trigger: AGGAGCCCTCTGCCGATGCCAAGCTGGCCGCTCACC...CAGCGTCAGCCCCGACCCTAGACCCCTCAGTTGCAGCTCCCAGCAGCCCAGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGCAAGGGCGCACGGGAAAGCCTTTCCTaGGGTGAGCGGCCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: AAHGQLRHRAGPFTCKGARESLS*GERPAW
Trigger: CCAAGCTGGCCGCTCACCCCAGGAAAGGCTTTCCCG...TGCGCCCTTGCATGTGAAGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp CAAACTGGACCAGTCCCAGCCTCCTGCGGCGCGTGCCGCCGATTCACAGTGGAGACAGGCTCCAAGGGATaGGTGCCAGGCGTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: QTGPVPASCGACRRFTVETGSKG*VPGVAL
Trigger: CAGGGCCACGCCTGGCACCCATCCCTTGGAGCCTGT...CTCCACTGTGAATCGGCGGCACGCGCCGCAGGAGGCTGGGACTGGTCCAGTTTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp TCTCCTGTACAGAAACACCAAGGGACCCACGACAGGCCTGCCCCGCATCGCAGGGGGCCGACGTCACCCTaGGGCCTAGGGCCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: SPVQKHQGTHDRPAPHRRGPTSP*GLGPER
Trigger: CCTCTCTGGCCCTAGGCCCCAGGGTGACGTCGGCCC...CCTGCGATGCGGGGCAGGCCTGTCGTGGGTCCCTTGGTGTTTCTGTACAGGAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp CCCACAGCAGCTGGGAGAACCAGCACAGGCTCCAAGGGATGGGTGCCAGGCGTGGGGCTGGCAGCTCCCTaGAGGGTGGATCTGTGGCAC +
Preference number: 4 (lower is better)
Translates to: PTAAGRTSTGSKGWVPGVGLAAP*RVDLWH
Trigger: GTGCCACAGATCCACCCTCCAGGGAGCTGCCAGCCC...CACGCCTGGCACCCATCCCTTGGAGCCTGTGCTGGTTCTCCCAGCTGCTGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GAATGTGGTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGCCTCCGTGGCTCCCTTTaGAGGCCACGTGGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: ECGGDGPAFGTGAARRGSLRGSL*RPRGRD
Trigger: ATCCCTACCACGTGGCCTCCAAAGGGAGCCACGGAG...GCTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCACATTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp ACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGCATGGCCCTGCGCACGGTaGCCTTCTCCAACTGTGCCG +
Preference number: 4 (lower is better)
Translates to: TIAQHMASCVTAQAPSHAWPCAR*PSPTVP
Trigger: CGGCACAGTTGGAGAAGGCCACCGTGCGCAGGGCCA...TGCATGTGAAGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457590.2
CDS-3UTR CCA 90 bp GCTCAGGCCGCGGGGAGGCCTCCGAGGAATGTGGTGGCGACGGGCCTGCCTTTGGAGAGGCAGCAGAGGTaGGGGGCAAGAAAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: AQAAGRPPRNVVATGLPLERQQR*GARKLG
Trigger: ACCAAGCTTTCTTGCCCCCCACCTCTGCTGCCTCTC...CAAAGGCAGGCCCGTCGCCACCACATTCCTCGGAGGCCTCCCCGCGGCCTGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457590.2
CDS-3UTR TCA 90 bp GGAATGTGGTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGCGCTCCTTCAGCTGGTaGTCCACCTCAGGACCAAAG +
Preference number: 4 (lower is better)
Translates to: GMWWRRACLWYGSSASGERSFSW*STSGPK
Trigger: CTTTGGTCCTGAGGTGGATCACCAGCTGAAGGAGCG...CTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCACATTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR TCA 90 bp GGCACCATGCCGCGGGCGCGAGTTGGTCCACACCGTCCTTGCATAGGTCTCGCGGCTCCACCACGCGCATaGTGGTGCCGATGTCACTCA +
Preference number: 4 (lower is better)
Translates to: GTMPRARVGPHRPCIGLAAPPRA*WCRCHS
Trigger: TGAGTGACATCGGCACCATCATGCGCGTGGTGGAGC...CGCGAGACCTATGCAAGGACGGTGTGGACCAACTCGCGCCCGCGGCATGGTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR TCA 90 bp GGACCAGTCCCAGCCTCCTGCGGCGCGTGCCGCCGATTCACAGTGGAGCTCCCGCTAGCTCCACAATGCTaGTCTGCAGCTCCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: GPVPASCGACRRFTVELPLAPQC*SAAPGS
Trigger: ACTGCCTGGAGCTGCAGATCAGCATTGTGGAGCTAG...CGGGAGCTCCACTGTGAATCGGCGGCACGCGCCGCAGGAGGCTGGGACTGGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR TCA 90 bp GCTCAGGCCGCGGGGAGGCCTCCGAGGAATGTGGTGGCGACGGGCCTGCCTTTGCTCATGCTGCTCAAGTaGGGCAGCGAGAACTTGGTG +
Preference number: 4 (lower is better)
Translates to: AQAAGRPPRNVVATGLPLLMLLK*GSENLV
Trigger: CACCAAGTTCTCGCTGCCTCACTTGAGCAGCATGAG...CAAAGGCAGGCCCGTCGCCACCACATTCCTCGGAGGCCTCCCCGCGGCCTGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR TCA 90 bp ACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGCAGCTCCTCGTCTGAGGTaGGTGGGGAGTAGTGTGCCC +
Preference number: 4 (lower is better)
Translates to: TIAQHMASCVTAQAPSHAAPRLR*VGSSVP
Trigger: GGGCACACTACTCCCCACTCACCTCAGACGAGGAGC...TGCATGTGAAGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR TCA 90 bp CGCCGATTCACAGTGGAGCTCCCGTCCGTCCTTGCCTCTGCCGTCCAGGGGTGGCGGCCGCCGCAGAGATaGAGAGGTTGTGGCCATTCT +
Preference number: 4 (lower is better)
Translates to: RRFTVELPSVLASAVQGWRPPQR*RGCGHS
Trigger: AGAATGGCCACAACCTCTTCATCTCTGCGGCGGCCG...CCACCCCTGGACGGCAGAGGCAAGGACGGACGGGAGCTCCACTGTGAATCGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR TCA 90 bp GTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGCCGGCCGGCATAGGTCTCGCGGTTaGGGTAGAAATCCTAGTTAC +
Preference number: 4 (lower is better)
Translates to: VATGLPLVREQRVGGAGRHRSRG*GRNPSY
Trigger: GTAACTAGGATTTCTACCTCAACCGCGAGACCTATG...CCGGCCGGCTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR TCA 90 bp CAGGCGCGGGCCTGGGGACGAGATAGCACCGGGGCAGGCTGTGGCGAATCCGCTCCACGTTACAAAGGCTaGCACAGACCAGCAGCGTGT +
Preference number: 4 (lower is better)
Translates to: QARAWGRDSTGAGCGESAPRYKG*HRPAAC
Trigger: ACACGCTGCTGGTCTGTGTCAGCCTTTGTAACGTGG...AGCGGATTCGCCACAGCCTGCCCCGGTGCTATCTCGTCCCCAGGCCCGCGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR TCA 90 bp TGGACCAGTCCCAGCCTCCTGCGGCGCGTGCCGCCGATTCACAGTGGAGCTCCCGCCACACCTAGCAGGTaGCCTCCACGGGAGAAAGTA +
Preference number: 4 (lower is better)
Translates to: WTSPSLLRRVPPIHSGAPATPSR*PPREKV
Trigger: TACTTTCTCCCGTGGAGGTCACCTGCTAGGTGTGGC...GGGAGCTCCACTGTGAATCGGCGGCACGCGCCGCAGGAGGCTGGGACTGGTCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457590.2
CDS-3UTR TCA 90 bp GGCCACACACGTGAGGGAGCAGCTCGGGAGCACGTGAGTGGTGCTTCCCGACGTTGGGGACACGTAAGGTaGGCAGGCGGGCACAGTGTC +
Preference number: 4 (lower is better)
Translates to: GHTREGAAREHVSGASRRWGHVR*AGGHSV
Trigger: GACACTGTGCCCGCCTGCTCACCTTACGTGTCCCCA...ACGTCGGGAAGCACCACTCACGTGCTCCCGAGCTGCTCCCTCACGTGTGTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586024.1
CDS-3UTR TCA 90 bp GCTCGGGAGCACGTGAGTGGTGCTTCCCGACGTCCGTCAGCCGCCCGTGAGAGCCAGGTCCATCAACAGTaGAACCACGCTGGGGACACG +
Preference number: 4 (lower is better)
Translates to: AREHVSGASRRPSAARESQVHQQ*NHAGDT
Trigger: CGTGTCCCCAGCGTGGTTTCACTGTTGATGGACCTG...GCTCTCACGGGCGGCTGACGGACGTCGGGAAGCACCACTCACGTGCTCCCGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586024.1
CDS-3UTR GCA 90 bp CGTCACCGCGCAGGCCCCTTCACATGCAAGGGCGCAACCCACGCCCCGGAGGGTTCCACAGCTGGTGGATaGTGTCGATGGCACGGTTGT +
Preference number: 4 (lower is better)
Translates to: RHRAGPFTCKGATHAPEGSTAGG*CRWHGC
Trigger: ACAACCGTGCCATCGACAGCATCCACCAGCTGTGGA...ACCCTCCGGGGCGTGGGTTGCGCCCTTGCATGTGAAGGGGCCTGCGCGGTGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp GTCCTCACAGCACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCTTCAGCTTCATGGGCTaGGTGGTGCCCTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: VLTAPSRSTWPAASPRRPFSFMG*VVPFHS
Trigger: GCTGTGGAAGGGCACCACGCAGCCCATGAAGCTGAA...GGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGTGCTGTGAGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp TGGTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGCCGGCCCGCCATAGTGATGTTTaGAGTTGGTGGCAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: WWRRACLWYGSSASGEPARHSDV*SWWQQQ
Trigger: TTGCTGCTGCCACCAACTGCAAACATCACTATGGCG...GGCCGGCTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp ACAGGCCTGCCCCGCATCGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAAATCGAGCCTTGAGCAGCTaGAAGCTCTGGCCGCGGAGC +
Preference number: 4 (lower is better)
Translates to: TGLPRIAGHAASHGQPRNRALSS*KLWPRS
Trigger: GCTCCGCGGCCAGAGCTTGCAGCTGCTCAAGGCTCG...ATTTCTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGATGCGGGGCAGGCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp AATATGCTCTTCCCGAGGGCTCTACTCCAGGCAGACCCACAGGGCCCGGCTGTGGTGGCCCAGTCCAGCTaGAGCTCCTCGCAGCGAGCC +
Preference number: 4 (lower is better)
Translates to: NMLFPRALLQADPQGPAVVAQSS*SSSQRA
Trigger: GGCTCGCTGCGAGGAGCTGCAGCTGGACTGGGCCAC...CACAGCCGGGCCCTGTGGGTCTGCCTGGAGTAGAGCCCTCGGGAAGAGCATATT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586024.1
CDS-3UTR GCA 90 bp TGGACCAGTCCCAGCCTCCTGCGGCGCGTGCCGCCGATTCACAGTGGAGCTCCCTGCAGCTCCAGGCAGTaGCTCTGCTTCTCCGAGATC +
Preference number: 4 (lower is better)
Translates to: WTSPSLLRRVPPIHSGAPCSSRQ*LCFSEI
Trigger: GATCTCGGAGAAGCAGAGGCACTGCCTGGAGCTGCA...GGGAGCTCCACTGTGAATCGGCGGCACGCGCCGCAGGAGGCTGGGACTGGTCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp CCTCCGAGGAATGTGGTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGCTCCGGGCTCATGCTaGTCAAGTGAGGCAGCGAGA +
Preference number: 4 (lower is better)
Translates to: PPRNVVATGLPLVREQRVAPGSC*SSEAAR
Trigger: TCTCGCTGCCTCACTTGAGCAGCATGAGCCCGGAGC...GACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCACATTCCTCGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp CCTCCGAGGAATGTGGTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCTGCTCAGCTCTCGAATaGAGCTCACTGGCAGCCGGC +
Preference number: 4 (lower is better)
Translates to: PPRNVVATGLPLVREQRVCSALE*SSLAAG
Trigger: GCCGGCTGCCAGTGAGCTGCATTCGAGAGCTGAGCA...GACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCACATTCCTCGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp TCTCCTGTACAGAAACACCAAGGGACCCACGACAGGCCTGCCCCGCATCGCAGGCGCCTGCGACTGTCCTaGCCGTGGCTCGGCACACAG +
Preference number: 4 (lower is better)
Translates to: SPVQKHQGTHDRPAPHRRRLRLS*PWLGTQ
Trigger: CTGTGTGCCGAGCCACGGGCAGGACAGTCGCAGGCG...CCTGCGATGCGGGGCAGGCCTGTCGTGGGTCCCTTGGTGTTTCTGTACAGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp GTGGCGAATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTGGCCCCCGCCGAAGGTaGAGCCGTTGGCAGGGTTGG +
Preference number: 4 (lower is better)
Translates to: VANPLAGPPCRHVSLYRAGPRRR*SRWQGW
Trigger: CCAACCCTGCCAACGGCTGCACCTTCGGCGGGGGCC...AGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATTCGCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp GCCCCGCATCGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAAATACAAAAGTGCAGCGGACGACACGTaGACCAGGCCTGCGGCGGCC +
Preference number: 4 (lower is better)
Translates to: APHRRACCEPWTAEKYKSAADDT*TRPAAA
Trigger: GGCCGCCGCAGGCCTGGTGCACGTGTCGTCCGCTGC...ACTTTTGTATTTCTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGATGCGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp GTCCTCACAGCACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCGGTCCACACCGTCCTTaGATAGGTCTCGCGGTTGAG +
Preference number: 4 (lower is better)
Translates to: VLTAPSRSTWPAASPRRPGPHRP*IGLAVE
Trigger: CTCAACCGCGAGACCTATGCAAGGACGGTGTGGACC...GGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGTGCTGTGAGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp GTGGCGAATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTCCAGTCCCAGCCTCCTaGGGCGCGTGCCGCCGATTC +
Preference number: 4 (lower is better)
Translates to: VANPLAGPPCRHVSLYRAPVPAS*GACRRF
Trigger: GAATCGGCGGCACGCGCCGCAGGAGGCTGGGACTGG...AGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATTCGCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp TGTCTGGGCTGCTGGGAGCTGCAACTGAGGGGTCTAGGGTCGGGGCTGACGCTGCCCTGCATGGCCATCTaGAGGACCCGTGATGGCACC +
Preference number: 4 (lower is better)
Translates to: CLGCWELQLRGLGSGLTLPCMAI*RTRDGT
Trigger: GGTGCCATCACGGGTCCTGCAGATGGCCATGCAGGG...CAGCGTCAGCCCCGACCCTAGACCCCTCAGTTGCAGCTCCCAGCAGCCCAGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp CCCACAGCAGCTGGGAGAACCAGCACAGGCTCCAAGGGATGGGTGCCAGGCGTGGTGGCAGCAGCAACCTaGAGCACGACCTGGCCCACA +
Preference number: 4 (lower is better)
Translates to: PTAAGRTSTGSKGWVPGVVAAAT*STTWPT
Trigger: TGTGGGCCAGGTCGTGCTCCAGGTTGCTGCTGCCAC...CACGCCTGGCACCCATCCCTTGGAGCCTGTGCTGGTTCTCCCAGCTGCTGTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GTCCTCACAGCACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCACGGCTTCTTCACGGTaGCTGCTCCCGCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: VLTAPSRSTWPAASPRRPTASSR*LLPPSL
Trigger: AAGAGAAGGCGGGAGCAGCCACCGTGAAGAAGCCGT...GGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGTGCTGTGAGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GTGGCGAATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTCCACCAGCAGCGGGTTaGGGGAGTGCCGCTGCACGC +
Preference number: 4 (lower is better)
Translates to: VANPLAGPPCRHVSLYRAPPAAG*GSAAAR
Trigger: GCGTGCAGCGGCACTCCCCCAACCCGCTGCTGGTGG...AGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATTCGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp ACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGCAGCCGCACCCAGGAGCTaGGCGTTCTTCTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: TIAQHMASCVTAQAPSHAAAPRS*AFFSFS
Trigger: GGAGAAGGAGAAGAACGCCCAGCTCCTGGGTGCGGC...TGCATGTGAAGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp TGTCTGGGCTGCTGGGAGCTGCAACTGAGGGGTCTAGGGTCGGGGCTGACGCTGCAGCCTGGCCGTTCATaGAGAGCTCCGGGCTCATGC +
Preference number: 4 (lower is better)
Translates to: CLGCWELQLRGLGSGLTLQPGRS*RAPGSC
Trigger: GCATGAGCCCGGAGCTCTCCATGAACGGCCAGGCTG...CAGCGTCAGCCCCGACCCTAGACCCCTCAGTTGCAGCTCCCAGCAGCCCAGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp ACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGCAGTGAACAGGGAGTTCTaGCTGAGGGCGGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: TIAQHMASCVTAQAPSHAVNREF*LRAELA
Trigger: GGCCAGCTCCGCCCTCAGCCAGAACTCCCTGTTCAC...TGCATGTGAAGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp GTCCTCACAGCACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCAGTTGGTCAGTCTGGTaGCAGCGGACGACACGTGCA +
Preference number: 4 (lower is better)
Translates to: VLTAPSRSTWPAASPRRPSWSVW*QRTTRA
Trigger: TGCACGTGTCGTCCGCTGCCACCAGACTGACCAACT...GGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGTGCTGTGAGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp CAAACTGGACCAGTCCCAGCCTCCTGCGGCGCGTGCCGCCGATTCACAGTGGAGCCATGGCGTGCGAGTTaGTCAGTCTGGTGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: QTGPVPASCGACRRFTVEPWRAS*SVWWQR
Trigger: CCGCTGCCACCAGACTGACCAACTCGCACGCCATGG...CTCCACTGTGAATCGGCGGCACGCGCCGCAGGAGGCTGGGACTGGTCCAGTTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp TGTCTGGGCTGCTGGGAGCTGCAACTGAGGGGTCTAGGGTCGGGGCTGACGCTGGCCGCCGATTCACAGTaGAGCTCCCGTCCGTCCTTG +
Preference number: 4 (lower is better)
Translates to: CLGCWELQLRGLGSGLTLAADSQ*SSRPSL
Trigger: CAAGGACGGACGGGAGCTCCACTGTGAATCGGCGGC...CAGCGTCAGCCCCGACCCTAGACCCCTCAGTTGCAGCTCCCAGCAGCCCAGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp ACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGCAGCCGCCGATTCACAGTaGAGCTCCCGTCCGTCCTTG +
Preference number: 4 (lower is better)
Translates to: TIAQHMASCVTAQAPSHAAADSQ*SSRPSL
Trigger: CAAGGACGGACGGGAGCTCCACTGTGAATCGGCGGC...TGCATGTGAAGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp CAAACTGGACCAGTCCCAGCCTCCTGCGGCGCGTGCCGCCGATTCACAGTGGAGGGATCTGTGGCACCTTaGGGAAGGGGCTCCCCGATG +
Preference number: 4 (lower is better)
Translates to: QTGPVPASCGACRRFTVEGSVAP*GRGSPM
Trigger: CATCGGGGAGCCCCTTCCCCAAGGTGCCACAGATCC...CTCCACTGTGAATCGGCGGCACGCGCCGCAGGAGGCTGGGACTGGTCCAGTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GGCAGGCGCGGGCCTGGGGACGAGATAGCACCGGGGCAGGCTGTGGCGAATCCGAGCTATGTTGGAGGGTaGGGGTCTGAGAGGTTGTTG +
Preference number: 4 (lower is better)
Translates to: GRRGPGDEIAPGQAVANPSYVGG*GSERLL
Trigger: CAACAACCTCTCAGACCCCCACCCTCCAACATAGCT...CGGATTCGCCACAGCCTGCCCCGGTGCTATCTCGTCCCCAGGCCCGCGCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GGCCACCAGGTCGAAGGAGGTCTCCCCGTACACCTCGGGGGAGAAGGGCTCGTAACAGAGCGTGTGGCCTaGAAGTGCACAGGAGCCGGG +
Preference number: 4 (lower is better)
Translates to: GHQVEGGLPVHLGGEGLVTERVA*KCTGAG
Trigger: CCCGGCTCCTGTGCACTTCCAGGCCACACGCTCTGT...TACGAGCCCTTCTCCCCCGAGGTGTACGGGGAGACCTCCTTCGACCTGGTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478937.3
CDS-3UTR TCA 90 bp CGCCGATTCACAGTGGAGCTCCCGTCCGTCCTTGCCTCTGCCGTCCAGGGGTGGAGGGCTCGTAGTTGTTaGGCTTCTCGGGGTCGGTCA +
Preference number: 4 (lower is better)
Translates to: RRFTVELPSVLASAVQGWRARSC*ASRGRS
Trigger: TGACCGACCCCGAGAAGCTCAACAACTACGAGCCCT...CCACCCCTGGACGGCAGAGGCAAGGACGGACGGGAGCTCCACTGTGAATCGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR TCA 90 bp CACAGGTCCCCGCCAGCTGCCCACGGAAACTCAGGCCAGGTGCCAGCACCAGGCTTCACTCTCAGGATCTaGGAAGCCGGAATCGGAGGG +
Preference number: 4 (lower is better)
Translates to: HRSPPAAHGNSGQVPAPGFTLRI*EAGIGG
Trigger: CCCTCCGATTCCGGCTTCTCAGATCCTGAGAGTGAA...GCCTGGTGCTGGCACCTGGCCTGAGTTTCCGTGGGCAGCTGGCGGGGACCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR TCA 90 bp AATGTGGTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGCCACAGGAGCAAGCACTTaGGAAGGTGGGCTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: NVVATGLPLVREQRVGGATGAST*EGGLSK
Trigger: CTTGCTGAGCCCACCTTCTCAAGTGCTTGCTCCTGT...GGCTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCACATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR TCA 90 bp CGCCGATTCACAGTGGAGCTCCCGTCCGTCCTTGCCTCTGCCGTCCAGGGGTGGACAGCACCTTCTAGCTaGGAGCACCAACGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: RRFTVELPSVLASAVQGWTAPSS*EHQRGV
Trigger: CACCCCACGTTGGTGCTCTCAGCTAGAAGGTGCTGT...CCACCCCTGGACGGCAGAGGCAAGGACGGACGGGAGCTCCACTGTGAATCGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp ATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGCAAGGGACTGCTCCCGCAGCTaGTGGTTATGGGCGGAGATC +
Preference number: 4 (lower is better)
Translates to: IAQHMASCVTAQAPSHARDCSRS*WLWAEI
Trigger: GATCTCCGCCCATAACCAGCAGCTGCGGGAGCAGTC...CCTTGCATGTGAAGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp GCTCTACTCCAGGCAGACCCACAGGGCCCGGCTGTGGTAAAGAGGTCGGCGACCGACTGCTCCCGCAGCTaGTGGTTATGGGCGGAGATC +
Preference number: 4 (lower is better)
Translates to: ALLQADPQGPAVVKRSATDCSRS*WLWAEI
Trigger: GATCTCCGCCCATAACCAGCAGCTGCGGGAGCAGTC...GGTCGCCGACCTCTTTACCACAGCCGGGCCCTGTGGGTCTGCCTGGAGTAGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586024.1
CDS-3UTR GCA 90 bp CCGGCGGGCACCATGCCGCGGGCGCGAGTTGGTCCACACCGTCCTTGCATAGGTTCCACAATGCTGATCTaGAGCTCCAGGCAGTGCCTC +
Preference number: 4 (lower is better)
Translates to: PAGTMPRARVGPHRPCIGSTMLI*SSRQCL
Trigger: GAGGCACTGCCTGGAGCTGCAGATCAGCATTGTGGA...ACCTATGCAAGGACGGTGTGGACCAACTCGCGCCCGCGGCATGGTGCCCGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp ATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGCAAGGACACAGGACTTGAGCTaGAGGAGCTCCTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: IAQHMASCVTAQAPSHARTQDLS*RSSCCR
Trigger: GCGGCAGCAGGAGCTCCTGCAGCTCAAGTCCTGTGT...CCTTGCATGTGAAGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp GACCAGGGACTCGGCCGTCTCTGCCATCAACCCTGTGGCGTATCCGGCCCGTGGTGGTCCTGGCTCAGGTaGCGCCTCAGCACAATCTTG +
Preference number: 4 (lower is better)
Translates to: DQGLGRLCHQPCGVSGPWWSWLR*RLSTIL
Trigger: CAAGATTGTGCTGAGGCGGCACCTGAGCCAGGACCA...CCACGGGCCGGATACGCCACAGGGTTGATGGCAGAGACGGCCGAGTCCCTGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp GCTCAGGCCGCGGGGAGGCCTCCGAGGAATGTGGTGGCGACGGGCCTGCCTTTGTCAGGCCCTTCTCACTaGTCTTCTCTCCAGCAAGCT +
Preference number: 4 (lower is better)
Translates to: AQAAGRPPRNVVATGLPLSGPSH*SSLQQA
Trigger: AGCTTGCTGGAGAGAAGAGCAGTGAGAAGGGCCTGA...CAAAGGCAGGCCCGTCGCCACCACATTCCTCGGAGGCCTCCCCGCGGCCTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp GCCCCGCATCGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAAATACAAAAGTGCCAGCAGCAGGGGGTaGTGTGGCGTGGAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: APHRRACCEPWTAEKYKSASSRG*CGVELR
Trigger: CCGCAGCTCCACGCCACAGCACCCCCTGCTGCTGGC...ACTTTTGTATTTCTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGATGCGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp GACCAGGGACTCGGCCGTCTCTGCCATCAACCCTGTGGCGTATCCGGCCCGTGGGAGTGGGGAGTAGTGTaGCCCATTGGTCTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: DQGLGRLCHQPCGVSGPWEWGVV*PIGLAQ
Trigger: CTGAGCCAGACCAATGGGGCACACTACTCCCCACTC...CCACGGGCCGGATACGCCACAGGGTTGATGGCAGAGACGGCCGAGTCCCTGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp GTCCTCACAGCACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCTCTCAATTCGAGCACTaGTGGGCTCGTCCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: VLTAPSRSTWPAASPRRPSQFEH*WARPQS
Trigger: GCTCTGAGGACGAGCCCAGCAGTGCTCGAATTGAGA...GGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGTGCTGTGAGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp GATGTGACGTGTGTCCATCCTGCCCTTGGGAACCAGAACACAGGGCTGGCAGCTCGTCCGAGCCCTCCTTaGCGCGCTGCGAGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: DVTCVHPALGNQNTGLAARPSPP*RAARGS
Trigger: GCTTCCCCTCGCAGCGCGGCAAGGAGGGCTCGGACG...AGCTGCCAGCCCTGTGTTCTGGTTCCCAAGGGCAGGATGGACACACGTCACATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp GCCCCGCATCGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAAATACAAAAGTCACGTGCACCAGGCCTaGGGCGGCCGGCACAGAGCT +
Preference number: 4 (lower is better)
Translates to: APHRRACCEPWTAEKYKSHVHQA*GGRHRA
Trigger: AGCTCTGTGCCGGCCGCCGCAGGCCTGGTGCACGTG...ACTTTTGTATTTCTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGATGCGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp GCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGCAAGGGCGCACTGGCGGGCCCGCCCTaGAGACACGTGTCTTTATAT +
Preference number: 4 (lower is better)
Translates to: AAHGQLRHRAGPFTCKGALAGPP*RHVSLY
Trigger: ATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAG...TGCGCCCTTGCATGTGAAGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp GGAATGTGGTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGTCTGGGGGTTCACAGTaGCGGGGTAAAGGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: GMWWRRACLWYGSSASGESGGSQ*RGKGEE
Trigger: CTCTTCACCTTTACCCCGGCACTGTGAACCCCCAGA...CTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCACATTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp ATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGCAAGGTGCACTTGTTCAACGTaGCCGCGCCGTCCTCACAGC +
Preference number: 4 (lower is better)
Translates to: IAQHMASCVTAQAPSHARCTCST*PRRPHS
Trigger: GCTGTGAGGACGGCGCGGGCACGTTGAACAAGTGCA...CCTTGCATGTGAAGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp ACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGCAAACCCAGGCCCTGACTaGTCAGGGCTCCAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: TIAQHMASCVTAQAPSHANPGPD*SGLQKH
Trigger: GTGCTTCTGGAGCCCTGAGCAGTCAGGGCCTGGGTT...TGCATGTGAAGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp CCCACAGCAGCTGGGAGAACCAGCACAGGCTCCAAGGGATGGGTGCCAGGCGTGGCACAGAGCCACCACTaGTCAGACAACCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: PTAAGRTSTGSKGWVPGVAQSHH*SDNPGP
Trigger: AGGGCCTGGGTTGTCTGAGCAGTGGTGGCTCTGTGC...CACGCCTGGCACCCATCCCTTGGAGCCTGTGCTGGTTCTCCCAGCTGCTGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp ACAGGCCCAGGGCTCAGAACAGGAGGGTGTCCGCAGGCAGCCACCACACTAGTTCAGGTCCCCGCCAGCTaGCCACGGAAACTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: TGPGLRTGGCPQAATTLVQVPAS*PRKLRP
Trigger: TGGCCTGAGTTTCCGTGGGCAGCTGGCGGGGACCTG...AACTAGTGTGGTGGCTGCCTGCGGACACCCTCCTGTTCTGAGCCCTGGGCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp AGTGTGACTCTCTCCTGTACAGAAACACCAAGGGACCCACGACAGGCCTGCCCCCAGCTCCCAGAGCCTTaGCAGAGCCCGGGCGGCCAC +
Preference number: 4 (lower is better)
Translates to: SVTLSCTETPRDPRQACPQLPEP*QSPGGH
Trigger: GTGGCCGCCCGGGCTCTGGCAAGGCTCTGGGAGCTG...GGGGCAGGCCTGTCGTGGGTCCCTTGGTGTTTCTGTACAGGAGAGAGTCACACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457590.2
CDS-3UTR GCA 90 bp AGTGTGACTCTCTCCTGTACAGAAACACCAAGGGACCCACGACAGGCCTGCCCCGGGCGGGCGCCCTTGTaGGGGAGGGAGGTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: SVTLSCTETPRDPRQACPGRAPL*GREVSL
Trigger: CAAGCTCACCTCCCTCCCGCACAAGGGCGCCCGCCC...GGGGCAGGCCTGTCGTGGGTCCCTTGGTGTTTCTGTACAGGAGAGAGTCACACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457590.2
CDS-3UTR CCA 90 bp ATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGCAAGGGCGTGTTCAGCTTCATaGGCTGCGTGGTGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: IAQHMASCVTAQAPSHARACSAS*AAWCPS
Trigger: GGAAGGGCACCACGCAGCCCATGAAGCTGAACACGC...CCTTGCATGTGAAGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GGCAGGCGCGGGCCTGGGGACGAGATAGCACCGGGGCAGGCTGTGGCGAATCCGAGTGATGTTTGCAGTTaGTGGCAGCAGCAACCTGGA +
Preference number: 4 (lower is better)
Translates to: GRRGPGDEIAPGQAVANPSDVCS*WQQQPG
Trigger: TCCAGGTTGCTGCTGCCACCAACTGCAAACATCACT...CGGATTCGCCACAGCCTGCCCCGGTGCTATCTCGTCCCCAGGCCCGCGCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp CCCACCCACAGTCAGCAGCAGCAGCACAGGTCCCCGCCAGCTGCCCACGGAAACAGCTCCTGCTGCCGCTaGCTCTTCTCTAGCTCCACA +
Preference number: 4 (lower is better)
Translates to: PTHSQQQQHRSPPAAHGNSSCCR*LFSSST
Trigger: TGTGGAGCTAGAGAAGAGCCAGCGGCAGCAGGAGCT...GTTTCCGTGGGCAGCTGGCGGGGACCTGTGCTGCTGCTGCTGACTGTGGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GACCAGGGACTCGGCCGTCTCTGCCATCAACCCTGTGGCGTATCCGGCCCGTGGCTGCTCCCAGCACCGTaGGCATTAGCACCAATCTGC +
Preference number: 4 (lower is better)
Translates to: DQGLGRLCHQPCGVSGPWLLPAP*ALAPIC
Trigger: GCAGATTGGTGCTAATGCCCACGGTGCTGGGAGCAG...CCACGGGCCGGATACGCCACAGGGTTGATGGCAGAGACGGCCGAGTCCCTGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GGAATGTGGTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGAAAGGCTCCCAGAGCTaGAGGACTCATCCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: GMWWRRACLWYGSSASGEKGSQS*RTHPRW
Trigger: CCACCTTGGATGAGTCCTCCAGCTCTGGGAGCCTTT...CTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCACATTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GGTAGGGATGTGACGTGTGTCCATCCTGCCCTTGGGAACCAGAACACAGGGCTGGCAGGGCTCGGCGCTTaGGGGACACGCCTGCGCTCA +
Preference number: 4 (lower is better)
Translates to: GRDVTCVHPALGNQNTGLAGLGA*GTRLRS
Trigger: TGAGCGCAGGCGTGTCCCCCAAGCGCCGAGCCCTGC...CAGCCCTGTGTTCTGGTTCCCAAGGGCAGGATGGACACACGTCACATCCCTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GGCAGGCGCGGGCCTGGGGACGAGATAGCACCGGGGCAGGCTGTGGCGAATCCGAGATGGGCGAGAAGGTaGACTTCCACTTGCTGCTAT +
Preference number: 4 (lower is better)
Translates to: GRRGPGDEIAPGQAVANPRWARR*TSTCCY
Trigger: ATAGCAGCAAGTGGAAGTCCACCTTCTCGCCCATCT...CGGATTCGCCACAGCCTGCCCCGGTGCTATCTCGTCCCCAGGCCCGCGCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp GCGGACCGTGACAATGCGCGCAATCCAAATACAGTTCACCCGGAAGACACGGCACGCGGTCCCGGGCCTTaGCGGCCTTGCCGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: ADRDNARNPNTVHPEDTARGPGP*RPCRSA
Trigger: TGCTGAGCGGCAAGGCCGCCAAGGCCCGGGACCGCG...TGCCGTGTCTTCCGGGTGAACTGTATTTGGATTGCGCGCATTGTCACGGTCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp CAAACTGGACCAGTCCCAGCCTCCTGCGGCGCGTGCCGCCGATTCACAGTGGAGGCGAGTTGGTCAGTCTaGTGGCAGCGGACGACACGT +
Preference number: 4 (lower is better)
Translates to: QTGPVPASCGACRRFTVEASWSV*WQRTTR
Trigger: ACGTGTCGTCCGCTGCCACCAGACTGACCAACTCGC...CTCCACTGTGAATCGGCGGCACGCGCCGCAGGAGGCTGGGACTGGTCCAGTTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp GCCCCGCATCGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAAATACAAAAGTTCAGCACCAAGCGGGTaGAGGCAGGCGCGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: APHRRACCEPWTAEKYKSSAPSG*RQARAW
Trigger: CCAGGCCCGCGCCTGCCTCCACCCGCTTGGTGCTGA...ACTTTTGTATTTCTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGATGCGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR TCA 90 bp GTGGCGAATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTCCACGCCCCGGAGGGTaGACAGTCTGGGGGTTCACA +
Preference number: 4 (lower is better)
Translates to: VANPLAGPPCRHVSLYRAPRPGG*TVWGFT
Trigger: TGTGAACCCCCAGACTGTTCACCCTCCGGGGCGTGG...AGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATTCGCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR TCA 90 bp TGTCTGGGCTGCTGGGAGCTGCAACTGAGGGGTCTAGGGTCGGGGCTGACGCTGGTGGTGACACGCATATaGCCCAGTGGGCTCAAGGAG +
Preference number: 4 (lower is better)
Translates to: CLGCWELQLRGLGSGLTLVVTRI*PSGLKE
Trigger: CTCCTTGAGCCCACTGGGTCATATGCGTGTCACCAC...CAGCGTCAGCCCCGACCCTAGACCCCTCAGTTGCAGCTCCCAGCAGCCCAGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR TCA 90 bp AGGCAGGGGCGCCGGCAGCTCTGTCTGGGCTGCTGGGAGCTGCAACTGAGGGGTGTTCCTATCAATTCCTaGGCAAGAGCCACTCCCAGG +
Preference number: 4 (lower is better)
Translates to: RQGRRQLCLGCWELQLRGVPINS*ARATPR
Trigger: CCTGGGAGTGGCTCTTGCTCAGGAATTGATAGGAAC...ACCCCTCAGTTGCAGCTCCCAGCAGCCCAGACAGAGCTGCCGGCGCCCCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp TCCTCACAGCACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCCGCAGAGCCTCTGCATaGTCTCGAAGCTTTTGGTGT +
Preference number: 4 (lower is better)
Translates to: SSQHHRAAHGQLRHRAGPRRASA*SRSFWC
Trigger: ACACCAAAAGCTTCGAGAGCATGCAGAGGCTCTGCG...GGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGTGCTGTGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp CCGGCGGGCACCATGCCGCGGGCGCGAGTTGGTCCACACCGTCCTTGCATAGGTGTGCAGGGCATCCAGTaGAGTTTGGTTCTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: PAGTMPRARVGPHRPCIGVQGIQ*SLVLLG
Trigger: CCCAAGAAGAACCAAACTGCACTGGATGCCCTGCAC...ACCTATGCAAGGACGGTGTGGACCAACTCGCGCCCGCGGCATGGTGCCCGCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp AGTGTGACTCTCTCCTGTACAGAAACACCAAGGGACCCACGACAGGCCTGCCCCAGCGGGTTGGGGGAGTaGCGCTGCACGCTCGGAGGT +
Preference number: 4 (lower is better)
Translates to: SVTLSCTETPRDPRQACPSGLGE*RCTLGG
Trigger: ACCTCCGAGCGTGCAGCGGCACTCCCCCAACCCGCT...GGGGCAGGCCTGTCGTGGGTCCCTTGGTGTTTCTGTACAGGAGAGAGTCACACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp AGGCAGGGGCGCCGGCAGCTCTGTCTGGGCTGCTGGGAGCTGCAACTGAGGGGTGGGGGTCTTTGTGTATaGCAGGAACTGCAGGTACTG +
Preference number: 4 (lower is better)
Translates to: RQGRRQLCLGCWELQLRGGGLCV*QELQVL
Trigger: CAGTACCTGCAGTTCCTGGCATACACAAAGACCCCC...ACCCCTCAGTTGCAGCTCCCAGCAGCCCAGACAGAGCTGCCGGCGCCCCTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp TGGACCAGTCCCAGCCTCCTGCGGCGCGTGCCGCCGATTCACAGTGGAGCTCCCTGGCTCTTCAGGGCCTaGTTCTCCTTCAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: WTSPSLLRRVPPIHSGAPWLFRA*FSFNSF
Trigger: GAAGCTGTTGAAGGAGAAGCAGGCCCTGAAGAGCCA...GGGAGCTCCACTGTGAATCGGCGGCACGCGCCGCAGGAGGCTGGGACTGGTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp GCAGCTCGGGAGCACGTGAGTGGTGCTTCCCGACGTCCGTCAGCCGCCCGTGAGTGGCTCTTCAGGGCCTaGTTCTCCTTCAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: AAREHVSGASRRPSAAREWLFRA*FSFNSF
Trigger: GAAGCTGTTGAAGGAGAAGCAGGCCCTGAAGAGCCA...CTCACGGGCGGCTGACGGACGTCGGGAAGCACCACTCACGTGCTCCCGAGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586024.1
CDS-3UTR GCA 90 bp CACACACGTGAGGGAGCAGCTCGGGAGCACGTGAGTGGTGCTTCCCGACGTCCGTGCAGCTCCAGGCAGTaGCTCTGCTTCTCCGAGATC +
Preference number: 4 (lower is better)
Translates to: HTREGAAREHVSGASRRPCSSRQ*LCFSEI
Trigger: GATCTCGGAGAAGCAGAGGCACTGCCTGGAGCTGCA...CGGACGTCGGGAAGCACCACTCACGTGCTCCCGAGCTGCTCCCTCACGTGTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586024.1
CDS-3UTR GCA 90 bp ACAGTCAGCAGCAGCAGCACAGGTCCCCGCCAGCTGCCCACGGAAACTCAGGCCGCAGCGAGAACTTGGTaGAGTCCAGCTCCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: TVSSSSTGPRQLPTETQAAARTW*SPAPGA
Trigger: TGCACCTGGAGCTGGACTGCACCAAGTTCTCGCTGC...GGCCTGAGTTTCCGTGGGCAGCTGGCGGGGACCTGTGCTGCTGCTGCTGACTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp GGAGCCCGGCAGGCCGGCGGGCACCATGCCGCGGGCGCGAGTTGGTCCACACCGTTTTCGGGGGAGATTTaGTTTCTAAGGAGATTGTTG +
Preference number: 4 (lower is better)
Translates to: GARQAGGHHAAGASWSTPFSGEI*FLRRLL
Trigger: CAACAATCTCCTTAGAAAGCAAATCTCCCCCGAAAA...CGGTGTGGACCAACTCGCGCCCGCGGCATGGTGCCCGCCGGCCTGCCGGGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp TCTCCTGTACAGAAACACCAAGGGACCCACGACAGGCCTGCCCCGCATCGCAGGGCCAGGCCGTCCAGCTaGCTCTTGCTCAGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: SPVQKHQGTHDRPAPHRRARPSS*LLLRKG
Trigger: CCCTTTCCTGAGCAAGAGGCAGCTGGACGGCCTGGC...CCTGCGATGCGGGGCAGGCCTGTCGTGGGTCCCTTGGTGTTTCTGTACAGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp ATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGCAAGGAAGCTGCCCATGGCGTaGGAGTTGGTCAGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: IAQHMASCVTAQAPSHARKLPMA*ELVSLV
Trigger: CACCAGACTGACCAACTCGCACGCCATGGGCAGCTT...CCTTGCATGTGAAGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp GCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGCAAGGGCGCAGACGTGTGTCCATCCTaGCCTTGGGAACCAGAACAC +
Preference number: 4 (lower is better)
Translates to: AAHGQLRHRAGPFTCKGADVCPS*PWEPEH
Trigger: GTGTTCTGGTTCCCAAGGGCAGGATGGACACACGTC...TGCGCCCTTGCATGTGAAGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp CCCACAGCAGCTGGGAGAACCAGCACAGGCTCCAAGGGATGGGTGCCAGGCGTGGAAACTCAGGCCAGGTaGCAGCACCAGGCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: PTAAGRTSTGSKGWVPGVETQAR*QHQAPD
Trigger: ATCTGGAGCCTGGTGCTGGCACCTGGCCTGAGTTTC...CACGCCTGGCACCCATCCCTTGGAGCCTGTGCTGGTTCTCCCAGCTGCTGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp ATCTGGGCCACCAGGTCGAAGGAGGTCTCCCCGTACACCTCGGGGGAGAAGGGCTTGTCGCAGAGCCTCTaGATGCTCTCGAAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: IWATRSKEVSPYTSGEKGLSQSL*MLSKLG
Trigger: GCCCAGCTTCGAGAGCATGCAGAGGCTCTGCGACAA...GCCCTTCTCCCCCGAGGTGTACGGGGAGACCTCCTTCGACCTGGTGGCCCAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478937.3
CDS-3UTR CCA 90 bp CTTGTCGCAGAGCCTCTGCATGCTCTCGAAGCTGGGCACTGCATGTGCCGAGGTGGCGCAGGAGTCCAGTaGACGGCCGCGTGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: LVAEPLHALEAGHCMCRGGAGVQ*TAACSA
Trigger: AGCTGAACACGCGGCCGTCCACTGGACTCCTGCGCC...ACCTCGGCACATGCAGTGCCCAGCTTCGAGAGCATGCAGAGGCTCTGCGACAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478937.3
CDS-3UTR CCA 90 bp CCGGCGGGCACCATGCCGCGGGCGCGAGTTGGTCCACACCGTCCTTGCATAGGTTGGTCTCCGCATACTTaGCCGGGATGTCTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: PAGTMPRARVGPHRPCIGWSPHT*PGCLLS
Trigger: AGAAAGCAGACATCCCGGCCAAGTATGCGGAGACCA...ACCTATGCAAGGACGGTGTGGACCAACTCGCGCCCGCGGCATGGTGCCCGCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp CCGGCGGGCACCATGCCGCGGGCGCGAGTTGGTCCACACCGTCCTTGCATAGGTTCTTCTTGCGGGCTTTaGAGGGAGACGGCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: PAGTMPRARVGPHRPCIGSSCGL*RETASS
Trigger: TGAAGAAGCCGTCTCCCTCCAAAGCCCGCAAGAAGA...ACCTATGCAAGGACGGTGTGGACCAACTCGCGCCCGCGGCATGGTGCCCGCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp ACAGGCCCAGGGCTCAGAACAGGAGGGTGTCCGCAGGCAGCCACCACACTAGTTTCCTCCTTCTGGGCCTaGCAGTGGCTGAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: TGPGLRTGGCPQAATTLVSSFWA*QWLRSC
Trigger: GCAGCTCCTCAGCCACTGCCAGGCCCAGAAGGAGGA...AACTAGTGTGGTGGCTGCCTGCGGACACCCTCCTGTTCTGAGCCCTGGGCCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp AGTGTGACTCTCTCCTGTACAGAAACACCAAGGGACCCACGACAGGCCTGCCCCAGCAGCTGCAAGCTCTaGCCGCGGAGCGCGCGGTTG +
Preference number: 4 (lower is better)
Translates to: SVTLSCTETPRDPRQACPSSCKL*PRSARL
Trigger: CAACCGCGCGCTCCGCGGCCAGAGCTTGCAGCTGCT...GGGGCAGGCCTGTCGTGGGTCCCTTGGTGTTTCTGTACAGGAGAGAGTCACACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GGAATGTGGTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGGAAGGCCGTTCTCCTTaGTGTGCTCAGCTCTCGAAT +
Preference number: 4 (lower is better)
Translates to: GMWWRRACLWYGSSASGEEGRSP*CAQLSN
Trigger: ATTCGAGAGCTGAGCACACCAAGGAGAACGGCCTTC...CTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCACATTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp AATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTCTCATACCCTCTCGGCGCGGCTaGGCAGCACCACGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: NPLAGPPCRHVSLYRALIPSRRG*AAPRWP
Trigger: TGGCCAGCGTGGTGCTGCCCAGCCGCGCCGAGAGGG...TATGAGAGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp TCTCCTGTACAGAAACACCAAGGGACCCACGACAGGCCTGCCCCGCATCGCAGGAGGACTCATCCAAGGTaGCCGGCTCGGCTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: SPVQKHQGTHDRPAPHRRRTHPR*PARLQV
Trigger: CACCTGGAGCCGAGCCGGCCACCTTGGATGAGTCCT...CCTGCGATGCGGGGCAGGCCTGTCGTGGGTCCCTTGGTGTTTCTGTACAGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp ACAGTCAGCAGCAGCAGCACAGGTCCCCGCCAGCTGCCCACGGAAACTCAGGCCAGTAGTGTGCCCCATTaGTCTGGCTCAGAGGCCGCT +
Preference number: 4 (lower is better)
Translates to: TVSSSSTGPRQLPTETQASSVPH*SGSEAA
Trigger: AGCGGCCTCTGAGCCAGACCAATGGGGCACACTACT...GGCCTGAGTTTCCGTGGGCAGCTGGCGGGGACCTGTGCTGCTGCTGCTGACTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp ACAGTCAGCAGCAGCAGCACAGGTCCCCGCCAGCTGCCCACGGAAACTCAGGCCCAATTCGAGCACTGCTaGGCTCGTCCTCAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: TVSSSSTGPRQLPTETQAQFEHC*ARPQSL
Trigger: CAGGCTCTGAGGACGAGCCCAGCAGTGCTCGAATTG...GGCCTGAGTTTCCGTGGGCAGCTGGCGGGGACCTGTGCTGCTGCTGCTGACTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp CAGGCGCGGGCCTGGGGACGAGATAGCACCGGGGCAGGCTGTGGCGAATCCGCTAGATGGGCGAGAAGGTaGACTTCCACTTGCTGCTAT +
Preference number: 4 (lower is better)
Translates to: QARAWGRDSTGAGCGESARWARR*TSTCCY
Trigger: ATAGCAGCAAGTGGAAGTCCACCTTCTCGCCCATCT...AGCGGATTCGCCACAGCCTGCCCCGGTGCTATCTCGTCCCCAGGCCCGCGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp GATGTGACGTGTGTCCATCCTGCCCTTGGGAACCAGAACACAGGGCTGGCAGCTGTGGGGTCTTGTCCGTaGGCCCGCACAGCGGTAGGC +
Preference number: 4 (lower is better)
Translates to: DVTCVHPALGNQNTGLAAVGSCP*ARTAVG
Trigger: GCCTACCGCTGTGCGGGCCCACGGACAAGACCCCAC...AGCTGCCAGCCCTGTGTTCTGGTTCCCAAGGGCAGGATGGACACACGTCACATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp AGTGTGACTCTCTCCTGTACAGAAACACCAAGGGACCCACGACAGGCCTGCCCCGTGGGGTCTTGTCCGTaGGCCCGCACAGCGGTAGGC +
Preference number: 4 (lower is better)
Translates to: SVTLSCTETPRDPRQACPVGSCP*ARTAVG
Trigger: GCCTACCGCTGTGCGGGCCCACGGACAAGACCCCAC...GGGGCAGGCCTGTCGTGGGTCCCTTGGTGTTTCTGTACAGGAGAGAGTCACACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp ACAGGCCTGCCCCGCATCGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAAATCCAGAAGCACTGGAGTaGCCCTGCCTGCCTGCTACA +
Preference number: 4 (lower is better)
Translates to: TGLPRIAGHAASHGQPRNPEALE*PCLPAT
Trigger: TGTAGCAGGCAGGCAGGGCCACTCCAGTGCTTCTGG...ATTTCTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGATGCGGGGCAGGCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GACCAGGGACTCGGCCGTCTCTGCCATCAACCCTGTGGCGTATCCGGCCCGTGGTGTCCATCCTGCCCTTaGGAACCAGAACACAGGGCT +
Preference number: 4 (lower is better)
Translates to: DQGLGRLCHQPCGVSGPWCPSCP*EPEHRA
Trigger: AGCCCTGTGTTCTGGTTCCCAAGGGCAGGATGGACA...CCACGGGCCGGATACGCCACAGGGTTGATGGCAGAGACGGCCGAGTCCCTGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GCCCCGCATCGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAAATACAAAAGTGGCGTATCCGGCCCGTaGCGACACAGAGCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: APHRRACCEPWTAEKYKSGVSGP*RHRAGC
Trigger: GCAGCCTGCTCTGTGTCGCCACGGGCCGGATACGCC...ACTTTTGTATTTCTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGATGCGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR TCA 90 bp GCTCAGGCCGCGGGGAGGCCTCCGAGGAATGTGGTGGCGACGGGCCTGCCTTTGGCAGGTACTGGATCTTaGAGGACTCTAGAAGCTTCT +
Preference number: 4 (lower is better)
Translates to: AQAAGRPPRNVVATGLPLAGTGS*RTLEAS
Trigger: AGAAGCTTCTAGAGTCCTTCAAGATCCAGTACCTGC...CAAAGGCAGGCCCGTCGCCACCACATTCCTCGGAGGCCTCCCCGCGGCCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR TCA 90 bp GTGCTTCCCGACGTCCGTCAGCCGCCCGTGAGAGCCCGCCTCCGGGGACAGCCTTCATCCAATTTTTGCTaGAACAGCCTCCTGATCTCC +
Preference number: 4 (lower is better)
Translates to: VLPDVRQPPVRARLRGQPSSNFC*NSLLIS
Trigger: GGAGATCAGGAGGCTGTTTCAGCAAAAATTGGATGA...AGGCTGTCCCCGGAGGCGGGCTCTCACGGGCGGCTGACGGACGTCGGGAAGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586024.1
CDS-3UTR TCA 90 bp GCCCCGCATCGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAAATACAAAAGTTCCACTTGCTGCTATTaGCTGGCTCGCCGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: APHRRACCEPWTAEKYKSSTCCY*LARRRA
Trigger: CGCCCGCCGGCGAGCCAGTCAATAGCAGCAAGTGGA...ACTTTTGTATTTCTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGATGCGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR TCA 90 bp CCCACAGGGCCCGGCTGTGGTAAAGAGGTCGGCGACCTCCGTTTCTCTAATGTACAGCTCGGGAGCACGTaGGTGGTGCTTCCCGACGTC +
Preference number: 4 (lower is better)
Translates to: PTGPGCGKEVGDLRFSNVQLGST*VVLPDV
Trigger: GACGTCGGGAAGCACCACTCACGTGCTCCCGAGCTG...TACATTAGAGAAACGGAGGTCGCCGACCTCTTTACCACAGCCGGGCCCTGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586024.1
CDS-3UTR TCA 90 bp CAAATATGCTCTTCCCGAGGGCTCTACTCCAGGCAGACCCACAGGGCCCGGCTGTCTAATGTACGCTGGTaGGGCTCGCCTGGGCCACAC +
Preference number: 4 (lower is better)
Translates to: QICSSRGLYSRQTHRARLSNVRW*GSPGPH
Trigger: GTGTGGCCCAGGCGAGCCTCACCAGCGTACATTAGA...CAGCCGGGCCCTGTGGGTCTGCCTGGAGTAGAGCCCTCGGGAAGAGCATATTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586024.1
CDS-3UTR GCA 90 bp GGACCAGTCCCAGCCTCCTGCGGCGCGTGCCGCCGATTCACAGTGGAGCTCCCGGTGTATGCCAGGAACTaGAGGTACTGGATCTTGAAG +
Preference number: 4 (lower is better)
Translates to: GPVPASCGACRRFTVELPVYARN*RYWILK
Trigger: CTTCAAGATCCAGTACCTGCAGTTCCTGGCATACAC...CGGGAGCTCCACTGTGAATCGGCGGCACGCGCCGCAGGAGGCTGGGACTGGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp CAGGGCCCGGCTGTGGTAAAGAGGTCGGCGACCTCCGTTTCTCTAATGTACGCTCGAGCCTTGAGCAGCTaGAAGCTCTGGCCGCGGAGC +
Preference number: 4 (lower is better)
Translates to: QGPAVVKRSATSVSLMYARALSS*KLWPRS
Trigger: GCTCCGCGGCCAGAGCTTGCAGCTGCTCAAGGCTCG...AGCGTACATTAGAGAAACGGAGGTCGCCGACCTCTTTACCACAGCCGGGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586024.1
CDS-3UTR GCA 90 bp ACAGGCCTGCCCCGCATCGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAAATGAGTGGGGAGTAGTGTaGCCCATTGGTCTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: TGLPRIAGHAASHGQPRNEWGVV*PIGLAQ
Trigger: CTGAGCCAGACCAATGGGGCACACTACTCCCCACTC...ATTTCTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGATGCGGGGCAGGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp ATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGCAAGGTCTGGGGGTTCACAGTaGCGGGGTAAAGGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: IAQHMASCVTAQAPSHARSGGSQ*RGKGEE
Trigger: CTCTTCACCTTTACCCCGGCACTGTGAACCCCCAGA...CCTTGCATGTGAAGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp GCCCCGCATCGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAAATACAAAAGTGCAGGCCCCTTCACATaGAAGGGCGCAACCCACGCC +
Preference number: 4 (lower is better)
Translates to: APHRRACCEPWTAEKYKSAGPFT*KGATHA
Trigger: GGCGTGGGTTGCGCCCTTGCATGTGAAGGGGCCTGC...ACTTTTGTATTTCTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGATGCGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp GAGGGAGCAGCTCGGGAGCACGTGAGTGGTGCTTCCCGACGTCCGTCAGCCGCCGTCAGAACCCAAATATaGTCTTCCCGAGGGCTCTAC +
Preference number: 4 (lower is better)
Translates to: EGAAREHVSGASRRPSAAVRTQI*SSRGLY
Trigger: GTAGAGCCCTCGGGAAGAGCATATTTGGGTTCTGAC...GGCGGCTGACGGACGTCGGGAAGCACCACTCACGTGCTCCCGAGCTGCTCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586024.1
CDS-3UTR CCA 90 bp AGTGTGACTCTCTCCTGTACAGAAACACCAAGGGACCCACGACAGGCCTGCCCCTCGAATGCAGCTCACTaGCAGCCGGCCTGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: SVTLSCTETPRDPRQACPSNAAH*QPACRA
Trigger: TGCCCGGCAGGCCGGCTGCCAGTGAGCTGCATTCGA...GGGGCAGGCCTGTCGTGGGTCCCTTGGTGTTTCTGTACAGGAGAGAGTCACACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GGTAGGGATGTGACGTGTGTCCATCCTGCCCTTGGGAACCAGAACACAGGGCTGTGCTGCCAGGCACGCTaGGGCTCTGGTAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: GRDVTCVHPALGNQNTGLCCQAR*GSGREG
Trigger: GCCTTCCCTACCAGAGCCCCAGCGTGCCTGGCAGCA...CAGCCCTGTGTTCTGGTTCCCAAGGGCAGGATGGACACACGTCACATCCCTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GAAGTCTTAAATAAGTCACTGTGCGTGCCTCATGGGCCGAGGAGGGGGTATCCTGGGGGTGCTGTGGCGTaGAGCTGCGGGACCCCACGG +
Preference number: 4 (lower is better)
Translates to: EVLNKSLCVPHGPRRGYPGGAVA*SCGTPR
Trigger: CCGTGGGGTCCCGCAGCTCCACGCCACAGCACCCCC...AGGATACCCCCTCCTCGGCCCATGAGGCACGCACAGTGACTTATTTAAGACTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GGTAGGGATGTGACGTGTGTCCATCCTGCCCTTGGGAACCAGAACACAGGGCTGGGGGGCTGTGCTTGCTaGAGGGCGACTGCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: GRDVTCVHPALGNQNTGLGGCAC*RATAWH
Trigger: GTGCCAAGCAGTCGCCCTCCAGCAAGCACAGCCCCC...CAGCCCTGTGTTCTGGTTCCCAAGGGCAGGATGGACACACGTCACATCCCTACC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GTGGCGAATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTGTGAACAGGGAGTTCTaGCTGAGGGCGGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: VANPLAGPPCRHVSLYRAVNREF*LRAELA
Trigger: GGCCAGCTCCGCCCTCAGCCAGAACTCCCTGTTCAC...AGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATTCGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp TCTCCTGTACAGAAACACCAAGGGACCCACGACAGGCCTGCCCCGCATCGCAGGTGCTCAGGAAAGGGTTaGCGTCCGAGCCCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: SPVQKHQGTHDRPAPHRRCSGKG*RPSPPC
Trigger: GCAAGGAGGGCTCGGACGCCAACCCTTTCCTGAGCA...CCTGCGATGCGGGGCAGGCCTGTCGTGGGTCCCTTGGTGTTTCTGTACAGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR TCA 90 bp GTCCTCACAGCACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCATCGGATGGTCTCGATaGTTTCATGAGCAGCATCGT +
Preference number: 4 (lower is better)
Translates to: VLTAPSRSTWPAASPRRPIGWSR*FHEQHR
Trigger: ACGATGCTGCTCATGAAATCATCGAGACCATCCGAT...GGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGTGCTGTGAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR TCA 90 bp GCGGACCGTGACAATGCGCGCAATCCAAATACAGTTCACCCGGAAGACACGGCATCCACTTGCTGCTATTaGCTGGCTCGCCGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: ADRDNARNPNTVHPEDTASTCCY*LARRRA
Trigger: CGCCCGCCGGCGAGCCAGTCAATAGCAGCAAGTGGA...TGCCGTGTCTTCCGGGTGAACTGTATTTGGATTGCGCGCATTGTCACGGTCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR TCA 90 bp GATGTGACGTGTGTCCATCCTGCCCTTGGGAACCAGAACACAGGGCTGGCAGCTGGTTGTGGCCATTCTTaGGGTCGACCTCGCGGTCCC +
Preference number: 4 (lower is better)
Translates to: DVTCVHPALGNQNTGLAAGCGHS*GRPRGP
Trigger: GGGACCGCGAGGTCGACCTCAAGAATGGCCACAACC...AGCTGCCAGCCCTGTGTTCTGGTTCCCAAGGGCAGGATGGACACACGTCACATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR TCA 90 bp GGAATGTGGTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGCATAGGTCTCGCGGTTaGGGTAGAAATCCTAGTTAC +
Preference number: 4 (lower is better)
Translates to: GMWWRRACLWYGSSASGEHRSRG*GRNPSY
Trigger: GTAACTAGGATTTCTACCTCAACCGCGAGACCTATG...CTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCACATTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp CCCACAGGGCCCGGCTGTGGTAAAGAGGTCGGCGACCTCCGTTTCTCTAATGTATTGTCCTGCTCCAGCTaGTCCGACTGCTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: PTGPGCGKEVGDLRFSNVLSCSS*SDCSRS
Trigger: GCTGCGGGAGCAGTCGGAGCAGCTGGAGCAGGACAA...TACATTAGAGAAACGGAGGTCGCCGACCTCTTTACCACAGCCGGGCCCTGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586024.1
CDS-3UTR GCA 90 bp GATGTGACGTGTGTCCATCCTGCCCTTGGGAACCAGAACACAGGGCTGGCAGCTGGGAGCTTGTTGGGCTaGACGGTGCTGAGCGGGATG +
Preference number: 4 (lower is better)
Translates to: DVTCVHPALGNQNTGLAAGSLLG*TVLSGM
Trigger: CATCCCGCTCAGCACCGTGCAGCCCAACAAGCTCCC...AGCTGCCAGCCCTGTGTTCTGGTTCCCAAGGGCAGGATGGACACACGTCACATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp AATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTCTCATACAGCACATGGCCAGCTaGGTCACCGCGCAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: NPLAGPPCRHVSLYRALIQHMAS*VTAQAP
Trigger: AGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTG...TATGAGAGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp CTTGTCGCAGAGCCTCTGCATGCTCTCGAAGCTGGGCACTGCATGTGCCGAGGTCGCAGAGCCTCTGCATaGTCTCGAAGCTGGGCACTG +
Preference number: 4 (lower is better)
Translates to: LVAEPLHALEAGHCMCRGRRASA*SRSWAL
Trigger: CAGTGCCCAGCTTCGAGAGCATGCAGAGGCTCTGCG...ACCTCGGCACATGCAGTGCCCAGCTTCGAGAGCATGCAGAGGCTCTGCGACAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478937.3
CDS-3UTR GCA 90 bp GCTCGGGAGCACGTGAGTGGTGCTTCCCGACGTCCGTCAGCCGCCCGTGAGAGCGCAGCAACGGTTTGGTaGAGTCATTTGAAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: AREHVSGASRRPSAARESAATVW*SHLKRQ
Trigger: CTGCCTTTTCAAATGACTGCACCAAACCGTTGCTGC...GCTCTCACGGGCGGCTGACGGACGTCGGGAAGCACCACTCACGTGCTCCCGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586024.1
CDS-3UTR CCA 90 bp AATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTCTCATAGCGCCTCCGCCATCTTaGGCCGGCGTGAAGCGAGCA +
Preference number: 4 (lower is better)
Translates to: NPLAGPPCRHVSLYRALIAPPPS*AGVKRA
Trigger: TGCTCGCTTCACGCCGGCCCAAGATGGCGGAGGCGC...TATGAGAGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GTGGCGAATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTCCCTTCCACAGCTGGTaGATGCTGTCGATGGCACGG +
Preference number: 4 (lower is better)
Translates to: VANPLAGPPCRHVSLYRAPFHSW*MLSMAR
Trigger: CCGTGCCATCGACAGCATCCACCAGCTGTGGAAGGG...AGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATTCGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GTCGAAGGAGGTCTCCCCGTACACCTCGGGGGAGAAGGGCTCGTAGTTGTTGAGGCGTGTTCAGCTTCATaGGCTGCGTGGTGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: VEGGLPVHLGGEGLVVVEACSAS*AAWCPS
Trigger: GGAAGGGCACCACGCAGCCCATGAAGCTGAACACGC...CTCAACAACTACGAGCCCTTCTCCCCCGAGGTGTACGGGGAGACCTCCTTCGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478937.3
CDS-3UTR CCA 90 bp CGCCGATTCACAGTGGAGCTCCCGTCCGTCCTTGCCTCTGCCGTCCAGGGGTGGATCTCATCAATCATCTaGGCCACCAGGTCGAAGGAG +
Preference number: 4 (lower is better)
Translates to: RRFTVELPSVLASAVQGWISSII*ATRSKE
Trigger: CTCCTTCGACCTGGTGGCCCAGATGATTGATGAGAT...CCACCCCTGGACGGCAGAGGCAAGGACGGACGGGAGCTCCACTGTGAATCGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp ATTAGTGTGACTCTCTCCTGTACAGAAACACCAAGGGACCCACGACAGGCCTGCCCAGGTGCAGCCGGCTaGCGTCAGGCTCCAGCTCGC +
Preference number: 4 (lower is better)
Translates to: ISVTLSCTETPRDPRQACPGAAG*RQAPAR
Trigger: GCGAGCTGGAGCCTGACGCCAGCCGGCTGCACCTGG...GCAGGCCTGTCGTGGGTCCCTTGGTGTTTCTGTACAGGAGAGAGTCACACTAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp CCGTCCTCACAGCACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCGTAATCTCCAGGGGCTaGTTGATGTTACTGACCATG +
Preference number: 4 (lower is better)
Translates to: PSSQHHRAAHGQLRHRAGVISRG*LMLLTM
Trigger: CATGGTCAGTAACATCAACCAGCCCCTGGAGATTAC...GCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGTGCTGTGAGGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp AATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTCTCATACTTGCTGCTATTGACTaGCTCGCCGGCGGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: NPLAGPPCRHVSLYRALILAAID*LAGGRG
Trigger: CCCGCGCCCGCCGGCGAGCCAGTCAATAGCAGCAAG...TATGAGAGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp GGTCCACACCGTCCTTGCATAGGTCTCGCGGTTGAGGTAGAAATCCTAGTTACCCTGTGGCGAATCCGCTaGCGGGCCCGCCCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: GPHRPCIGLAVEVEILVTLWRIR*RARPAD
Trigger: GTCTGCAGGGCGGGCCCGCCAGCGGATTCGCCACAG...GGTAACTAGGATTTCTACCTCAACCGCGAGACCTATGCAAGGACGGTGTGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457590.2
CDS-3UTR CCA 90 bp CATCGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAAATACAAAAGTAAATGCCACCGGGGCAGGCTGTaGCGAATCCGCTGGCGGGCC +
Preference number: 4 (lower is better)
Translates to: HRRACCEPWTAEKYKSKCHRGRL*RIRWRA
Trigger: GGCCCGCCAGCGGATTCGCCACAGCCTGCCCCGGTG...GCATTTACTTTTGTATTTCTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp GCCCCGCATCGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAAATACAAAAGTGTCCTGAACATACGGTaGCCTGCGTGGGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: APHRRACCEPWTAEKYKSVLNIR*PAWAGA
Trigger: GGCTCCTGCCCACGCAGGCCACCGTATGTTCAGGAC...ACTTTTGTATTTCTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGATGCGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp ACAGTCAGCAGCAGCAGCACAGGTCCCCGCCAGCTGCCCACGGAAACTCAGGCCCACCACCCCTCAGTCTaGGAGTGTCTGAGAAGAACA +
Preference number: 4 (lower is better)
Translates to: TVSSSSTGPRQLPTETQAHHPSV*ECLRRT
Trigger: TGTTCTTCTCAGACACTCCCAGACTGAGGGGTGGTG...GGCCTGAGTTTCCGTGGGCAGCTGGCGGGGACCTGTGCTGCTGCTGCTGACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GCCCCGCATCGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAAATACAAAAGTGGGGGCAAGAAAGCTTaGTTAGGCGGGAGGGACGCG +
Preference number: 4 (lower is better)
Translates to: APHRRACCEPWTAEKYKSGGKKA*LGGRDA
Trigger: CGCGTCCCTCCCGCCTAACCAAGCTTTCTTGCCCCC...ACTTTTGTATTTCTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGATGCGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000457590.2
CDS-3UTR CCA 90 bp AATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTCTCATAAGCCGGGGCAGGGGCTaGTGGTGCACCGTGAAGGAG +
Preference number: 4 (lower is better)
Translates to: NPLAGPPCRHVSLYRALISRGRG*WCTVKE
Trigger: CTCCTTCACGGTGCACCACCAGCCCCTGCCCCGGCT...TATGAGAGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457590.2
CDS-3UTR CCA 90 bp GTCGAAGGAGGTCTCCCCGTACACCTCGGGGGAGAAGGGCTCGTAGTTGTTGAGGCATGCTCTCGAAGCTaGGCACTGCATGTGCCGAGG +
Preference number: 4 (lower is better)
Translates to: VEGGLPVHLGGEGLVVVEACSRS*ALHVPR
Trigger: CCTCGGCACATGCAGTGCCCAGCTTCGAGAGCATGC...CTCAACAACTACGAGCCCTTCTCCCCCGAGGTGTACGGGGAGACCTCCTTCGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478937.3
3UTR CAA 72 bp AGGGGCTCCCCGATGCCATCTCACAGGAGCAAGCACTaGAGAAGGTGGGCTCAGCAAGTGCCACACAGCCCA +
Preference number: 4 (lower is better)
Translates to: RGSPMPSHRSKH*RRWAQQVPHSP
Trigger: TGGGCTGTGTGGCACTTGCTGAGCCCACCTTCTCAAGTGCTTGCTCCTGTGAGATGGCATCGGGGAGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR TCA 90 bp CAAACTGGACCAGTCCCAGCCTCCTGCGGCGCGTGCCGCCGATTCACAGTGGAGCCTCCTGTTCCTCCCTaGGTTTTGGGTTTTTCAGAC +
Preference number: 4 (lower is better)
Translates to: QTGPVPASCGACRRFTVEPPVPP*VLGFSD
Trigger: GTCTGAAAAACCCAAAACTCAGGGAGGAACAGGAGG...CTCCACTGTGAATCGGCGGCACGCGCCGCAGGAGGCTGGGACTGGTCCAGTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR TCA 90 bp CGCCGATTCACAGTGGAGCTCCCGTCCGTCCTTGCCTCTGCCGTCCAGGGGTGGGAGAAGCACCATCACTaGAGCTGTGTAAACTCAGGT +
Preference number: 4 (lower is better)
Translates to: RRFTVELPSVLASAVQGWEKHHH*SCVNSG
Trigger: ACCTGAGTTTACACAGCTTCAGTGATGGTGCTTCTC...CCACCCCTGGACGGCAGAGGCAAGGACGGACGGGAGCTCCACTGTGAATCGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR TCA 90 bp GCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGCAAGGGCGCAGAGAAGCACCATCACTaGAGCTGTGTAAACTCAGGT +
Preference number: 4 (lower is better)
Translates to: AAHGQLRHRAGPFTCKGAEKHHH*SCVNSG
Trigger: ACCTGAGTTTACACAGCTTCAGTGATGGTGCTTCTC...TGCGCCCTTGCATGTGAAGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR TCA 90 bp CCGTCCTCACAGCACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCTGCCACTCATTAGTGTaGCTCTCTCCTGTACAGAAA +
Preference number: 4 (lower is better)
Translates to: PSSQHHRAAHGQLRHRAGCHSLV*LSPVQK
Trigger: TTTCTGTACAGGAGAGAGTCACACTAATGAGTGGCA...GCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGTGCTGTGAGGACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR TCA 90 bp TCCTCACAGCACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTGCCACTCATTAGTGTaGCTCTCTCCTGTACAGAAA +
Preference number: 4 (lower is better)
Translates to: SSQHHRAAHGQLRHRAGPCHSLV*LSPVQK
Trigger: TTTCTGTACAGGAGAGAGTCACACTAATGAGTGGCA...GGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGTGCTGTGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp GACCAGGGACTCGGCCGTCTCTGCCATCAACCCTGTGGCGTATCCGGCCCGTGGTCGAGGACACGATTCTaGCACCTTCCTTCATGTTTG +
Preference number: 4 (lower is better)
Translates to: DQGLGRLCHQPCGVSGPWSRTRF*HLPSCL
Trigger: CAAACATGAAGGAAGGTGGCAGAATCGTGTCCTCGA...CCACGGGCCGGATACGCCACAGGGTTGATGGCAGAGACGGCCGAGTCCCTGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp TCTCCTGTACAGAAACACCAAGGGACCCACGACAGGCCTGCCCCGCATCGCAGGCCGTTCTCCTTGGTGTaGTCAGCTCTCGAATGCAGC +
Preference number: 4 (lower is better)
Translates to: SPVQKHQGTHDRPAPHRRPFSLV*SALECS
Trigger: GCTGCATTCGAGAGCTGAGCACACCAAGGAGAACGG...CCTGCGATGCGGGGCAGGCCTGTCGTGGGTCCCTTGGTGTTTCTGTACAGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp AATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTCTCATAGCAGGCCCCTTCACATaGAAGGGCGCAACCCACGCC +
Preference number: 4 (lower is better)
Translates to: NPLAGPPCRHVSLYRALIAGPFT*KGATHA
Trigger: GGCGTGGGTTGCGCCCTTGCATGTGAAGGGGCCTGC...TATGAGAGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp ACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGCATTAAATAAGTCACTGTaGGTGCCTCATGGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: TIAQHMASCVTAQAPSHALNKSL*VPHGPR
Trigger: CCTCGGCCCATGAGGCACGCACAGTGACTTATTTAA...TGCATGTGAAGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp CCACTCATTAGTGTGACTCTCTCCTGTACAGAAACACCAAGGGACCCACGACAGGGCAGGGGCTGGTGGTaGACCGTGAAGGAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: PLISVTLSCTETPRDPRQGRGWW*TVKEGR
Trigger: CCGCCCCTCCTTCACGGTGCACCACCAGCCCCTGCC...CTGTCGTGGGTCCCTTGGTGTTTCTGTACAGGAGAGAGTCACACTAATGAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457590.2
CDS-3UTR GCA 90 bp ATGCTGTCGATGGCACGGTTGTACTTGTCGCAGAGCCTCTGCATGCTCTCGAAGCGTGTGGCCTGGAAGTaGACAGGAGCCGGGCATGGC +
Preference number: 4 (lower is better)
Translates to: MLSMARLYLSQSLCMLSKRVAWK*TGAGHG
Trigger: GCCATGCCCGGCTCCTGTGCACTTCCAGGCCACACG...CTTCGAGAGCATGCAGAGGCTCTGCGACAAGTACAACCGTGCCATCGACAGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478937.3
CDS-3UTR CCA 90 bp CACAGGTCCCCGCCAGCTGCCCACGGAAACTCAGGCCAGGTGCCAGCACCAGGCAGGAACTGCAGGTACTaGATCTTGAAGGACTCTAGA +
Preference number: 4 (lower is better)
Translates to: HRSPPAAHGNSGQVPAPGRNCRY*ILKDSR
Trigger: TCTAGAGTCCTTCAAGATCCAGTACCTGCAGTTCCT...GCCTGGTGCTGGCACCTGGCCTGAGTTTCCGTGGGCAGCTGGCGGGGACCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GATGTGACGTGTGTCCATCCTGCCCTTGGGAACCAGAACACAGGGCTGGCAGCTTGCTCCCGCAGCTGCTaGTTATGGGCGGAGATCTCC +
Preference number: 4 (lower is better)
Translates to: DVTCVHPALGNQNTGLAACSRSC*LWAEIS
Trigger: GGAGATCTCCGCCCATAACCAGCAGCTGCGGGAGCA...AGCTGCCAGCCCTGTGTTCTGGTTCCCAAGGGCAGGATGGACACACGTCACATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GAAGTCTTAAATAAGTCACTGTGCGTGCCTCATGGGCCGAGGAGGGGGTATCCTGGCACCGTGTGGTCCTaGCTCAGGTGCCGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: EVLNKSLCVPHGPRRGYPGTVWS*LRCRLS
Trigger: GCTGAGGCGGCACCTGAGCCAGGACCACACGGTGCC...AGGATACCCCCTCCTCGGCCCATGAGGCACGCACAGTGACTTATTTAAGACTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GAAGTCTTAAATAAGTCACTGTGCGTGCCTCATGGGCCGAGGAGGGGGTATCCTCGCCTGCGCTCAAGCTaGGCGTCCCCGCAGATGCTC +
Preference number: 4 (lower is better)
Translates to: EVLNKSLCVPHGPRRGYPRLRSS*ASPQML
Trigger: GAGCATCTGCGGGGACGCCCAGCTTGAGCGCAGGCG...AGGATACCCCCTCCTCGGCCCATGAGGCACGCACAGTGACTTATTTAAGACTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GCCCCGCATCGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAAATACAAAAGTTGTGCCCCATTGGTCTaGCTCAGAGGCCGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: APHRRACCEPWTAEKYKSCAPLV*LRGRSF
Trigger: GAAGGAGCGGCCTCTGAGCCAGACCAATGGGGCACA...ACTTTTGTATTTCTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGATGCGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp GTGGCGAATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTAGTAGTGTGCCCCATTaGTCTGGCTCAGAGGCCGCT +
Preference number: 4 (lower is better)
Translates to: VANPLAGPPCRHVSLYRASSVPH*SGSEAA
Trigger: AGCGGCCTCTGAGCCAGACCAATGGGGCACACTACT...AGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATTCGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp GTGGCGAATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTCAATTCGAGCACTGCTaGGCTCGTCCTCAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: VANPLAGPPCRHVSLYRAQFEHC*ARPQSL
Trigger: CAGGCTCTGAGGACGAGCCCAGCAGTGCTCGAATTG...AGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATTCGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp AGTGTGACTCTCTCCTGTACAGAAACACCAAGGGACCCACGACAGGCCTGCCCCTGCTCAGGAAAGGGTTaGCGTCCGAGCCCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: SVTLSCTETPRDPRQACPCSGKG*RPSPPC
Trigger: GCAAGGAGGGCTCGGACGCCAACCCTTTCCTGAGCA...GGGGCAGGCCTGTCGTGGGTCCCTTGGTGTTTCTGTACAGGAGAGAGTCACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp GTGGCGAATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTCGGAAAAGCTGCCCATaGCGTGCGAGTTGGTCAGTC +
Preference number: 4 (lower is better)
Translates to: VANPLAGPPCRHVSLYRARKSCP*RASWSV
Trigger: GACTGACCAACTCGCACGCCATGGGCAGCTTTTCCG...AGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATTCGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp ACAGGCCTGCCCCGCATCGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAAATACGCATATGACCCAGTaGGCTCAAGGAGACTTCTGC +
Preference number: 4 (lower is better)
Translates to: TGLPRIAGHAASHGQPRNTHMTQ*AQGDFC
Trigger: GCAGAAGTCTCCTTGAGCCCACTGGGTCATATGCGT...ATTTCTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGATGCGGGGCAGGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
3UTR CAA 72 bp CACAGCTGGTGGATGCTGTCGATGGCACGGTTGTACTaGTCGCAGAGCCTCTGCATGCTCTCGAAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: HSWWMLSMARLY*SQSLCMLSKLG
Trigger: GCCCAGCTTCGAGAGCATGCAGAGGCTCTGCGACAAGTACAACCGTGCCATCGACAGCATCCACCAGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478937.3
CDS-3UTR TCA 90 bp TGTACTTGTCGCAGAGCCTCTGCATGCTCTCGAAGCTGGGCACTGCATGTGCCGAGGGCTCGTAGTTGTTaGGCTTCTCGGGGTCGGTCA +
Preference number: 4 (lower is better)
Translates to: CTCRRASACSRSWALHVPRARSC*ASRGRS
Trigger: TGACCGACCCCGAGAAGCTCAACAACTACGAGCCCT...CGGCACATGCAGTGCCCAGCTTCGAGAGCATGCAGAGGCTCTGCGACAAGTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478937.3
CDS-3UTR TCA 90 bp GCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGCAAGGGCGCATCATCCAATTTTTGCTaGAACAGCCTCCTGATCTCC +
Preference number: 4 (lower is better)
Translates to: AAHGQLRHRAGPFTCKGASSNFC*NSLLIS
Trigger: GGAGATCAGGAGGCTGTTTCAGCAAAAATTGGATGA...TGCGCCCTTGCATGTGAAGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR TCA 90 bp ATCGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAAATACAAAAGTAAATGCAGGTTGGTGCCCGGGCTaGGTCCGTCAGCCCCCGACA +
Preference number: 4 (lower is better)
Translates to: IAGHAASHGQPRNTKVNAGWCPG*VRQPPT
Trigger: TGTCGGGGGCTGACGGACTCAGCCCGGGCACCAACC...TGCATTTACTTTTGTATTTCTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp CCCACAGGGCCCGGCTGTGGTAAAGAGGTCGGCGACCTCCGTTTCTCTAATGTATCCAGGCAGTGCCTCTaGTTCTCCGAGATCTGGCTC +
Preference number: 4 (lower is better)
Translates to: PTGPGCGKEVGDLRFSNVSRQCL*FSEIWL
Trigger: GAGCCAGATCTCGGAGAAGCAGAGGCACTGCCTGGA...TACATTAGAGAAACGGAGGTCGCCGACCTCTTTACCACAGCCGGGCCCTGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586024.1
CDS-3UTR GCA 90 bp GCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGCAAGGGCGCAGCATTAGCACCAATCTaGTTTTCAAGTGTGGACGAG +
Preference number: 4 (lower is better)
Translates to: AAHGQLRHRAGPFTCKGAALAPI*FSSVDE
Trigger: CTCGTCCACACTTGAAAAGCAGATTGGTGCTAATGC...TGCGCCCTTGCATGTGAAGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp GGACCAGTCCCAGCCTCCTGCGGCGCGTGCCGCCGATTCACAGTGGAGCTCCCGTTTTCGGGGGAGATTTaGTTTCTAAGGAGATTGTTG +
Preference number: 4 (lower is better)
Translates to: GPVPASCGACRRFTVELPFSGEI*FLRRLL
Trigger: CAACAATCTCCTTAGAAAGCAAATCTCCCCCGAAAA...CGGGAGCTCCACTGTGAATCGGCGGCACGCGCCGCAGGAGGCTGGGACTGGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp AATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTCTCATAGCCAGGCCGTCCAGCTaGCTCTTGCTCAGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: NPLAGPPCRHVSLYRALIARPSS*LLLRKG
Trigger: CCCTTTCCTGAGCAAGAGGCAGCTGGACGGCCTGGC...TATGAGAGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp AATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTCTCATATCCAACTGTGCCGCCTaGCACCCCGGAAAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: NPLAGPPCRHVSLYRALISNCAA*HPGKAA
Trigger: GGCAGCTTTTCCGGGGTGGCAGGCGGCACAGTTGGA...TATGAGAGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp ATTAGTGTGACTCTCTCCTGTACAGAAACACCAAGGGACCCACGACAGGCCTGCCGTGGGCAGGAGCCCTaGATGGCCATCTGCAGGACC +
Preference number: 4 (lower is better)
Translates to: ISVTLSCTETPRDPRQACRGQEP*MAICRT
Trigger: GGTCCTGCAGATGGCCATGCAGGGCTCCTGCCCACG...GCAGGCCTGTCGTGGGTCCCTTGGTGTTTCTGTACAGGAGAGAGTCACACTAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GGGCATGCTGCGAGCCATGGACAGCCGAGAAATACAAAAGTAAATGCACTTGTTTTGCTCTCGCGCTGCTaGCGGCGCCGGGCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: GHAASHGQPRNTKVNALVLLSRC*RRRAAS
Trigger: GGAGGCAGCCCGGCGCCGCCAGCAGCGCGAGAGCAA...AACAAGTGCATTTACTTTTGTATTTCTCGGCTGTCCATGGCTCGCAGCATGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GGGCCCGGCTGTGGTAAAGAGGTCGGCGACCTCCGTTTCTCTAATGTACGCTGGTGCTTCTCCGAGATCTaGCTCTTCAGGGCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: GPGCGKEVGDLRFSNVRWCFSEI*LFRACF
Trigger: GAAGCAGGCCCTGAAGAGCCAGATCTCGGAGAAGCA...CCAGCGTACATTAGAGAAACGGAGGTCGCCGACCTCTTTACCACAGCCGGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586024.1
CDS-3UTR CCA 90 bp CCAGTGGCTCTGAGACCCAGTGCGTGTCCTGAACATACGGTGGCCTGCGTGGGCGAGATGAAGAGGTTGTaGCCATTCTTGAGGTCGACC +
Preference number: 4 (lower is better)
Translates to: PVALRPSACPEHTVACVGEMKRL*PFLRST
Trigger: GGTCGACCTCAAGAATGGCCACAACCTCTTCATCTC...GCCCACGCAGGCCACCGTATGTTCAGGACACGCACTGGGTCTCAGAGCCACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp AGTGTGACTCTCTCCTGTACAGAAACACCAAGGGACCCACGACAGGCCTGCCCCAAAGTAATGCTCTGGTaGCCCTGCGCACGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: SVTLSCTETPRDPRQACPKVMLW*PCARWP
Trigger: AGGCCACCGTGCGCAGGGCCACCAGAGCATTACTTT...GGGGCAGGCCTGTCGTGGGTCCCTTGGTGTTTCTGTACAGGAGAGAGTCACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457590.2
CDS-3UTR TCA 90 bp TCTCCTGTACAGAAACACCAAGGGACCCACGACAGGCCTGCCCCGCATCGCAGGCGTCGTCGGTCATCTTaGTCTCATCAATCATCTGGG +
Preference number: 4 (lower is better)
Translates to: SPVQKHQGTHDRPAPHRRRRRSS*SHQSSG
Trigger: CCCAGATGATTGATGAGATCAAGATGACCGACGACG...CCTGCGATGCGGGGCAGGCCTGTCGTGGGTCCCTTGGTGTTTCTGTACAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp AGTGTGACTCTCTCCTGTACAGAAACACCAAGGGACCCACGACAGGCCTGCCCCTCTCAATTCGAGCACTaGTGGGCTCGTCCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: SVTLSCTETPRDPRQACPSQFEH*WARPQS
Trigger: GCTCTGAGGACGAGCCCAGCAGTGCTCGAATTGAGA...GGGGCAGGCCTGTCGTGGGTCCCTTGGTGTTTCTGTACAGGAGAGAGTCACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp CCACTCATTAGTGTGACTCTCTCCTGTACAGAAACACCAAGGGACCCACGACAGGAGCTGAACAGCGACTaGAGCACGGAGGAGCCGGCC +
Preference number: 4 (lower is better)
Translates to: PLISVTLSCTETPRDPRQELNSD*STEEPA
Trigger: GGCCGGCTCCTCCGTGCTGCAGTCGCTGTTCAGCTC...CTGTCGTGGGTCCCTTGGTGTTTCTGTACAGGAGAGAGTCACACTAATGAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp AATACAGTTCACCCGGAAGACACGGCAGAGCCTCCCACGTTACAAAGGCTGACACCACCCCGGAAAAGCTaGCCATGGCGTGCGAGTTGG +
Preference number: 4 (lower is better)
Translates to: NTVHPEDTAEPPTLQRLTPPRKS*PWRASW
Trigger: CCAACTCGCACGCCATGGGCAGCTTTTCCGGGGTGG...TGTCAGCCTTTGTAACGTGGGAGGCTCTGCCGTGTCTTCCGGGTGAACTGTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp GCGGACCGTGACAATGCGCGCAATCCAAATACAGTTCACCCGGAAGACACGGCAAGTTACCTCCAACTGTaGCGCCTGCCACCCCGGAAA +
Preference number: 4 (lower is better)
Translates to: ADRDNARNPNTVHPEDTASYLQL*RLPPRK
Trigger: TTTCCGGGGTGGCAGGCGGCACAGTTGGAGGTAACT...TGCCGTGTCTTCCGGGTGAACTGTATTTGGATTGCGCGCATTGTCACGGTCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp CTTGATCTCATCAATCATCTGGGCCACCAGGTCGAAGGAGGTCTCCCCGTACACGCTGGGCACTGCATGTaGCGAGGTTCACACTTCCCC +
Preference number: 4 (lower is better)
Translates to: LDLINHLGHQVEGGLPVHAGHCM*RGSHFP
Trigger: GGGGAAGTGTGAACCTCGGCACATGCAGTGCCCAGC...GTGTACGGGGAGACCTCCTTCGACCTGGTGGCCCAGATGATTGATGAGATCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478937.3
CDS-3UTR GCA 90 bp TTGTACTTGTCGCAGAGCCTCTGCATGCTCTCGAAGCTGGGCACTGCATGTGCCCTCGAAGCTGGGCACTaGATGTGCCGAGGTTCACAC +
Preference number: 4 (lower is better)
Translates to: LYLSQSLCMLSKLGTACALEAGH*MCRGSH
Trigger: GTGTGAACCTCGGCACATGCAGTGCCCAGCTTCGAG...GGCACATGCAGTGCCCAGCTTCGAGAGCATGCAGAGGCTCTGCGACAAGTACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478937.3
CDS-3UTR CCA 90 bp CACGGTTGTACTTGTCGCAGAGCCTCTGCATGCTCTCGAAGCTGGGCACTGCATGTGCCCTTCCACAGCTaGTGGATGCTGTCGATGGCA +
Preference number: 4 (lower is better)
Translates to: HGCTCRRASACSRSWALHVPFHS*WMLSMA
Trigger: TGCCATCGACAGCATCCACCAGCTGTGGAAGGGCAC...ATGCAGTGCCCAGCTTCGAGAGCATGCAGAGGCTCTGCGACAAGTACAACCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478937.3
CDS-3UTR CCA 90 bp CATCGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAAATACAAAAGTAAATGCACCTGGAGCACGACCTaGCCCACACCGCTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: HRRACCEPWTAEKYKSKCTWSTT*PTPLPK
Trigger: CTTGGGGAGCGGTGTGGGCCAGGTCGTGCTCCAGGT...GCATTTACTTTTGTATTTCTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GTGGCGAATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTGATGTTTGCAGTTGGTaGCAGCAGCAACCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: VANPLAGPPCRHVSLYRADVCSW*QQQPGA
Trigger: TGCTCCAGGTTGCTGCTGCCACCAACTGCAAACATC...AGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATTCGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR TCA 90 bp CCTCCGAGGAATGTGGTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCTTCTACTGTTTATTCTaGAGTTCAGAGGTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: PPRNVVATGLPLVREQRVFYCLF*SSEVQR
Trigger: CCTTTGCACCTCTGAACTTCAGAATAAACAGTAGAA...GACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCACATTCCTCGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR TCA 90 bp ATCGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAAATACAAAAGTAAATGCAGTAGGCATCCTGGGGTaGGGAGGCCGCCGTCTGAGA +
Preference number: 4 (lower is better)
Translates to: IAGHAASHGQPRNTKVNAVGILG*GGRRLR
Trigger: TCTCAGACGGCGGCCTCCTCACCCCAGGATGCCTAC...TGCATTTACTTTTGTATTTCTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR TCA 90 bp ACAAAAATGGTCAGAACCCAAATATGCTCTTCCCGAGGGCTCTACTCCAGGCAGCCTCGCAGCGAGCCTTaGGCAGCTGCAAGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: TKMVRTQICSSRGLYSRQPRSEP*AAASSG
Trigger: GCCAGAGCTTGCAGCTGCTCAAGGCTCGCTGCGAGG...CTGCCTGGAGTAGAGCCCTCGGGAAGAGCATATTTGGGTTCTGACCATTTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586024.1
CDS-3UTR TCA 90 bp GGTAGGGATGTGACGTGTGTCCATCCTGCCCTTGGGAACCAGAACACAGGGCTGCTAGTTCACGTGTGGTaGCACGCATATGACCCAGTG +
Preference number: 4 (lower is better)
Translates to: GRDVTCVHPALGNQNTGLLVHVW*HAYDPV
Trigger: CACTGGGTCATATGCGTGTCACCACACGTGAACTAG...CAGCCCTGTGTTCTGGTTCCCAAGGGCAGGATGGACACACGTCACATCCCTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR TCA 90 bp ACCCAAATATGCTCTTCCCGAGGGCTCTACTCCAGGCAGACCCACAGGGCCCGGTTTGGTGCAGTCATTTaGAAAGGCAGCAGAGGTCCA +
Preference number: 4 (lower is better)
Translates to: TQICSSRGLYSRQTHRARFGAVI*KGSRGP
Trigger: TGGACCTCTGCTGCCTTTTCAAATGACTGCACCAAA...CCGGGCCCTGTGGGTCTGCCTGGAGTAGAGCCCTCGGGAAGAGCATATTTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586024.1
CDS-3UTR GCA 90 bp CAAAAATGGTCAGAACCCAAATATGCTCTTCCCGAGGGCTCTACTCCAGGCAGAAGCGCGCGGTTGTCCTaGTCCAGCTGCTCCGACTGC +
Preference number: 4 (lower is better)
Translates to: QKWSEPKYALPEGSTPGRSARLS*SSCSDC
Trigger: GCAGTCGGAGCAGCTGGAGCAGGACAACCGCGCGCT...TCTGCCTGGAGTAGAGCCCTCGGGAAGAGCATATTTGGGTTCTGACCATTTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586024.1
CDS-3UTR GCA 90 bp ATCGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAAATACAAAAGTAAATGCACCCTTCCCACGCAGGTaGAGGGACAGGGCGTCGTCA +
Preference number: 4 (lower is better)
Translates to: IAGHAASHGQPRNTKVNAPFPRR*RDRASS
Trigger: TGACGACGCCCTGTCCCTGCACCTGCGTGGGAAGGG...TGCATTTACTTTTGTATTTCTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp ATTAGTGTGACTCTCTCCTGTACAGAAACACCAAGGGACCCACGACAGGCCTGCTGCACTTGTTCAACGTaGCCGCGCCGTCCTCACAGC +
Preference number: 4 (lower is better)
Translates to: ISVTLSCTETPRDPRQACCTCST*PRRPHS
Trigger: GCTGTGAGGACGGCGCGGGCACGTTGAACAAGTGCA...GCAGGCCTGTCGTGGGTCCCTTGGTGTTTCTGTACAGGAGAGAGTCACACTAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp TTGTACTTGTCGCAGAGCCTCTGCATGCTCTCGAAGCTGGGCACTGCATGTGCCGGTGGATGCTGTCGATaGCACGGTTGTACTTGTCGC +
Preference number: 4 (lower is better)
Translates to: LYLSQSLCMLSKLGTACAGGCCR*HGCTCR
Trigger: GCGACAAGTACAACCGTGCCATCGACAGCATCCACC...GGCACATGCAGTGCCCAGCTTCGAGAGCATGCAGAGGCTCTGCGACAAGTACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478937.3
CDS-3UTR CCA 90 bp GCCCCGCATCGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAAATACAAAAGTGCATCCAGTGCAGTTTaGTTCTTCTTGGGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: APHRRACCEPWTAEKYKSASSAV*FFLGFR
Trigger: GCGGAAGCCCAAGAAGAACCAAACTGCACTGGATGC...ACTTTTGTATTTCTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGATGCGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTCTCATATATAGATATCCACGGAGCCGAGGTTaGCCTGCAGGGACATGGGGC +
Preference number: 4 (lower is better)
Translates to: AGPPCRHVSLYRALIYRYPRSRG*PAGTWG
Trigger: GCCCCATGTCCCTGCAGGCCAACCTCGGCTCCGTGG...ATATCTATATATGAGAGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp GCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTCTCATATATAGATATCGACGGGCCTGCCTTTaGTACGGGAGCAGCGCGTCG +
Preference number: 4 (lower is better)
Translates to: AGPPCRHVSLYRALIYRYRRACL*YGSSAS
Trigger: CGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCG...ATATCTATATATGAGAGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp AATACAGTTCACCCGGAAGACACGGCAGAGCCTCCCACGTTACAAAGGCTGACAGAAGCCTTTCCTCCGTaGCTCCCTTTGGAGGCCACG +
Preference number: 4 (lower is better)
Translates to: NTVHPEDTAEPPTLQRLTEAFPP*LPLEAT
Trigger: CGTGGCCTCCAAAGGGAGCCACGGAGGAAAGGCTTC...TGTCAGCCTTTGTAACGTGGGAGGCTCTGCCGTGTCTTCCGGGTGAACTGTATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp CATCTTGATCTCATCAATCATCTGGGCCACCAGGTCGAAGGAGGTCTCCCCGTACAGGCACAGAGCGTGTaGCCTGGAAGTGCACAGGAG +
Preference number: 4 (lower is better)
Translates to: HLDLINHLGHQVEGGLPVQAQSV*PGSAQE
Trigger: CTCCTGTGCACTTCCAGGCCACACGCTCTGTGCCTG...TACGGGGAGACCTCCTTCGACCTGGTGGCCCAGATGATTGATGAGATCAAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478937.3
CDS-3UTR CCA 90 bp TCTACTCCAGGCAGACCCACAGGGCCCGGCTGTGGTAAAGAGGTCGGCGACCTCCTTGCAGCAACGGTTTaGTGCAGTCATTTGAAAAGG +
Preference number: 4 (lower is better)
Translates to: STPGRPTGPGCGKEVGDLLAATV*CSHLKR
Trigger: CCTTTTCAAATGACTGCACCAAACCGTTGCTGCAAG...GAGGTCGCCGACCTCTTTACCACAGCCGGGCCCTGTGGGTCTGCCTGGAGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586024.1
CDS-3UTR TCA 90 bp ACTTGTCGCAGAGCCTCTGCATGCTCTCGAAGCTGGGCACTGCATGTGCCGAGGATCGGATGGTCTCGATaGTTTCATGAGCAGCATCGT +
Preference number: 4 (lower is better)
Translates to: TCRRASACSRSWALHVPRIGWSR*FHEQHR
Trigger: ACGATGCTGCTCATGAAATCATCGAGACCATCCGAT...CCTCGGCACATGCAGTGCCCAGCTTCGAGAGCATGCAGAGGCTCTGCGACAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478937.3
CDS-3UTR GCA 90 bp GATGTGACGTGTGTCCATCCTGCCCTTGGGAACCAGAACACAGGGCTGGCAGCTTTGTCGCAGAGCCTCTaGATGCTCTCGAAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: DVTCVHPALGNQNTGLAALSQSL*MLSKLL
Trigger: CAAAAGCTTCGAGAGCATGCAGAGGCTCTGCGACAA...AGCTGCCAGCCCTGTGTTCTGGTTCCCAAGGGCAGGATGGACACACGTCACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp ATCGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAAATACAAAAGTAAATGCATTGTCCTGCTCCAGCTaGTCCGACTGCTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: IAGHAASHGQPRNTKVNALSCSS*SDCSRS
Trigger: GCTGCGGGAGCAGTCGGAGCAGCTGGAGCAGGACAA...TGCATTTACTTTTGTATTTCTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp GCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTCTCATATATAGATATTGGTGGCGACGGGCCTaGCTTTGGTACGGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: AGPPCRHVSLYRALIYRYWWRRA*LWYGSS
Trigger: GCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCA...ATATCTATATATGAGAGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp CGCCGATTCACAGTGGAGCTCCCGTCCGTCCTTGCCTCTGCCGTCCAGGGGTGGAAATACAAAAGTAAATaGACTTGTTCAACGTGCCCG +
Preference number: 4 (lower is better)
Translates to: RRFTVELPSVLASAVQGWKYKSK*TCSTCP
Trigger: CGGGCACGTTGAACAAGTGCATTTACTTTTGTATTT...CCACCCCTGGACGGCAGAGGCAAGGACGGACGGGAGCTCCACTGTGAATCGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp AATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTCTCATAGGTGGATGCTGTCGATaGCACGGTTGTACTTGTCGC +
Preference number: 4 (lower is better)
Translates to: NPLAGPPCRHVSLYRALIGGCCR*HGCTCR
Trigger: GCGACAAGTACAACCGTGCCATCGACAGCATCCACC...TATGAGAGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp CCACTCATTAGTGTGACTCTCTCCTGTACAGAAACACCAAGGGACCCACGACAGGCCTCGGGGCCCTTGTaGGGAAGAGAAGCACCATCA +
Preference number: 4 (lower is better)
Translates to: PLISVTLSCTETPRDPRQASGPL*GREAPS
Trigger: TGATGGTGCTTCTCTTCCCCACAAGGGCCCCGAGGC...CTGTCGTGGGTCCCTTGGTGTTTCTGTACAGGAGAGAGTCACACTAATGAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp CATCGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAAATACAAAAGTAAATGCGCGAGTTGGTCAGTCTaGTGGCAGCGGACGACACGT +
Preference number: 4 (lower is better)
Translates to: HRRACCEPWTAEKYKSKCASWSV*WQRTTR
Trigger: ACGTGTCGTCCGCTGCCACCAGACTGACCAACTCGC...GCATTTACTTTTGTATTTCTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp CCACTCATTAGTGTGACTCTCTCCTGTACAGAAACACCAAGGGACCCACGACAGTGGAGGGTGGATCTGTaGCACCTTGGGGAAGGGGCT +
Preference number: 4 (lower is better)
Translates to: PLISVTLSCTETPRDPRQWRVDL*HLGEGA
Trigger: AGCCCCTTCCCCAAGGTGCCACAGATCCACCCTCCA...CTGTCGTGGGTCCCTTGGTGTTTCTGTACAGGAGAGAGTCACACTAATGAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp CATCGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAAATACAAAAGTAAATGCGCGGAGGGCACCGCGTaGTTAAAGACACCCAACACC +
Preference number: 4 (lower is better)
Translates to: HRRACCEPWTAEKYKSKCAEGTA*LKTPNT
Trigger: GGTGTTGGGTGTCTTTAACCACGCGGTGCCCTCCGC...GCATTTACTTTTGTATTTCTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457590.2
CDS-3UTR CCA 90 bp AAAAATGGTCAGAACCCAAATATGCTCTTCCCGAGGGCTCTACTCCAGGCAGACACAGTGTCGACGGGATaGGGCTCTGCAGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: KNGQNPNMLFPRALLQADTVSTG*GSAAPG
Trigger: GCCTGGAGCTGCAGAGCCCCATCCCGTCGACACTGT...GTCTGCCTGGAGTAGAGCCCTCGGGAAGAGCATATTTGGGTTCTGACCATTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586024.1
CDS-3UTR GCA 90 bp GGGCATGCTGCGAGCCATGGACAGCCGAGAAATACAAAAGTAAATGCACTTGTTGGCCTTCTCCAACTGTaGCGCCTGCCACCCCGGAAA +
Preference number: 4 (lower is better)
Translates to: GHAASHGQPRNTKVNALVGLLQL*RLPPRK
Trigger: TTTCCGGGGTGGCAGGCGGCACAGTTGGAGAAGGCC...AACAAGTGCATTTACTTTTGTATTTCTCGGCTGTCCATGGCTCGCAGCATGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457590.2
CDS-3UTR CCA 90 bp GCTCCCCAAGTCCACAAACAGGTCGTCGTCGGTCATCTTGATCTCATCAATCATGCTTCATGGGCTGCGTaGTGCCCTTCCACAGCTGGT +
Preference number: 4 (lower is better)
Translates to: APQVHKQVVVGHLDLINHASWAA*CPSTAG
Trigger: ACCAGCTGTGGAAGGGCACCACGCAGCCCATGAAGC...ATGATTGATGAGATCAAGATGACCGACGACGACCTGTTTGTGGACTTGGGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478937.3
CDS-3UTR CCA 90 bp ATCGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAAATACAAAAGTAAATGCAGGTGAGGCCAGGTACTaGGGCGTGTTCTGCTTCGAC +
Preference number: 4 (lower is better)
Translates to: IAGHAASHGQPRNTKVNAGEARY*GVFCFD
Trigger: GTCGAAGCAGAACACGCCCCAGTACCTGGCCTCACC...TGCATTTACTTTTGTATTTCTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTCTCATATATAGATATTGCGGGACCCCACGGTaGCAAAAAGGCTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: AGPPCRHVSLYRALIYRYCGTPR*QKGSQS
Trigger: GCTCTGGGAGCCTTTTTGCCACCGTGGGGTCCCGCA...ATATCTATATATGAGAGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GGGCATGCTGCGAGCCATGGACAGCCGAGAAATACAAAAGTAAATGCACTTGTTCAGCTCCCTGGAGGGTaGATCTGTGGCACCTTGGGG +
Preference number: 4 (lower is better)
Translates to: GHAASHGQPRNTKVNALVQLPGG*ICGTLG
Trigger: CCCCAAGGTGCCACAGATCCACCCTCCAGGGAGCTG...AACAAGTGCATTTACTTTTGTATTTCTCGGCTGTCCATGGCTCGCAGCATGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTCTCATATATAGATATACCAGAACACAGGGCTaGCAGCTCCCTGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: AGPPCRHVSLYRALIYRYTRTQG*QLPGGW
Trigger: CCACCCTCCAGGGAGCTGCCAGCCCTGTGTTCTGGT...ATATCTATATATGAGAGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp CCACTCATTAGTGTGACTCTCTCCTGTACAGAAACACCAAGGGACCCACGACAGGAGAAAGTAATGCTCTaGTGGCCCTGCGCACGGTGG +
Preference number: 4 (lower is better)
Translates to: PLISVTLSCTETPRDPRQEKVML*WPCARW
Trigger: CCACCGTGCGCAGGGCCACCAGAGCATTACTTTCTC...CTGTCGTGGGTCCCTTGGTGTTTCTGTACAGGAGAGAGTCACACTAATGAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457590.2
3UTR CAA 72 bp CTCCCCAAGTCCACAAACAGGTCGTCGTCGGTCATCTaGATCTCATCAATCATCTGGGCCACCAGGTCGAAG +
Preference number: 4 (lower is better)
Translates to: LPKSTNRSSSVI*ISSIIWATRSK
Trigger: CTTCGACCTGGTGGCCCAGATGATTGATGAGATCAAGATGACCGACGACGACCTGTTTGTGGACTTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478937.3
CDS-3UTR TCA 90 bp GGGCATGCTGCGAGCCATGGACAGCCGAGAAATACAAAAGTAAATGCACTTGTTACCCAGTGCGTGTCCTaGACATACGGTGGCCTGCGT +
Preference number: 4 (lower is better)
Translates to: GHAASHGQPRNTKVNALVTQCVS*TYGGLR
Trigger: ACGCAGGCCACCGTATGTTCAGGACACGCACTGGGT...AACAAGTGCATTTACTTTTGTATTTCTCGGCTGTCCATGGCTCGCAGCATGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp TGTCACCTAGAGGGAGGCAGAAGTAATACAGTGTTTAAAGAATGTGTCTTGTTCCCCAGGAAGGACCGGTaGGTCTGGGCGGAGGACGCC +
Preference number: 4 (lower is better)
Translates to: CHLEGGRSNTVFKECVLFPRKDR*VWAEDA
Trigger: GGCGTCCTCCGCCCAGACGCACCGGTCCTTCCTGGG...GAACAAGACACATTCTTTAAACACTGTATTACTTCTGCCTCCCTCTAGGTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp GAAAAGATGATGACAAAAATGGTCAGAACCCAAATATGCTCTTCCCGAGGGCTCGACGGGATGGGGCTCTaGAGCTCCAGGCAGTGCCTC +
Preference number: 4 (lower is better)
Translates to: EKMMTKMVRTQICSSRGLDGMGL*SSRQCL
Trigger: GAGGCACTGCCTGGAGCTGCAGAGCCCCATCCCGTC...GAGCCCTCGGGAAGAGCATATTTGGGTTCTGACCATTTTTGTCATCATCTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000586024.1
CDS-3UTR CCA 90 bp ATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGCAAGGTGCTCTCGAAGCTTTTaGTGTCATAGTCAATTAAAA +
Preference number: 4 (lower is better)
Translates to: IAQHMASCVTAQAPSHARCSRSF*CHSQLK
Trigger: TTTTAATTGACTATGACACCAAAAGCTTCGAGAGCA...CCTTGCATGTGAAGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp GGGCATGCTGCGAGCCATGGACAGCCGAGAAATACAAAAGTAAATGCACTTGTTGGGTGGGGAGGGCACTaGGCACCACTTAAGAGGACA +
Preference number: 4 (lower is better)
Translates to: GHAASHGQPRNTKVNALVGWGGH*APLKRT
Trigger: TGTCCTCTTAAGTGGTGCCCAGTGCCCTCCCCACCC...AACAAGTGCATTTACTTTTGTATTTCTCGGCTGTCCATGGCTCGCAGCATGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR TCA 90 bp AATACAGTTCACCCGGAAGACACGGCAGAGCCTCCCACGTTACAAAGGCTGACAATTTCATCCACTTCCTaGACTCGCGGTCCATGGTCT +
Preference number: 4 (lower is better)
Translates to: NTVHPEDTAEPPTLQRLTISSTS*TRGPWS
Trigger: AGACCATGGACCGCGAGTTCAGGAAGTGGATGAAAT...TGTCAGCCTTTGTAACGTGGGAGGCTCTGCCGTGTCTTCCGGGTGAACTGTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp CTCCCCAAGTCCACAAACAGGTCGTCGTCGGTCATCTTGATCTCATCAATCATCTCCACAGCTGGTGGATaGTGTCGATGGCACGGTTGT +
Preference number: 4 (lower is better)
Translates to: LPKSTNRSSSVILISSIISTAGG*CRWHGC
Trigger: ACAACCGTGCCATCGACAGCATCCACCAGCTGTGGA...GATGATTGATGAGATCAAGATGACCGACGACGACCTGTTTGTGGACTTGGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478937.3
CDS-3UTR GCA 90 bp GCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTCTCATATATAGATATCGTCCAGCTGCCTCTTaGTCAGGAAAGGGTTGGCGT +
Preference number: 4 (lower is better)
Translates to: AGPPCRHVSLYRALIYRYRPAAS*SGKGWR
Trigger: ACGCCAACCCTTTCCTGAGCAAGAGGCAGCTGGACG...ATATCTATATATGAGAGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR GCA 90 bp TGTCACCTAGAGGGAGGCAGAAGTAATACAGTGTTTAAAGAATGTGTCTTGTTCGAGCCGAGGTTGGCCTaGAGGGACATGGGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: CHLEGGRSNTVFKECVLFEPRLA*RDMGPS
Trigger: GCTCGGCCCCATGTCCCTGCAGGCCAACCTCGGCTC...GAACAAGACACATTCTTTAAACACTGTATTACTTCTGCCTCCCTCTAGGTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp AATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTCTCATAGTAATCTCCAGGGGCTaGTTGATGTTACTGACCATG +
Preference number: 4 (lower is better)
Translates to: NPLAGPPCRHVSLYRALIVISRG*LMLLTM
Trigger: CATGGTCAGTAACATCAACCAGCCCCTGGAGATTAC...TATGAGAGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp ATTAGTGTGACTCTCTCCTGTACAGAAACACCAAGGGACCCACGACAGGCCTGCGAGATGAAGAGGTTGTaGCCATTCTTGAGGTCGACC +
Preference number: 4 (lower is better)
Translates to: ISVTLSCTETPRDPRQACEMKRL*PFLRST
Trigger: GGTCGACCTCAAGAATGGCCACAACCTCTTCATCTC...GCAGGCCTGTCGTGGGTCCCTTGGTGTTTCTGTACAGGAGAGAGTCACACTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CCA 90 bp GAAAAGATGATGACAAAAATGGTCAGAACCCAAATATGCTCTTCCCGAGGGCTCTCGGGAGCACGTGAGTaGTGCTTCCCGACGTCCGTC +
Preference number: 4 (lower is better)
Translates to: EKMMTKMVRTQICSSRGLSGARE*CFPTSV
Trigger: GACGGACGTCGGGAAGCACCACTCACGTGCTCCCGA...GAGCCCTCGGGAAGAGCATATTTGGGTTCTGACCATTTTTGTCATCATCTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586024.1
CDS-3UTR GCA 90 bp GAAGTCTTAAATAAGTCACTGTGCGTGCCTCATGGGCCGAGGAGGGGGTATCCTACCTTCCTTCATGTTTaGAAACCGCTCCTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: EVLNKSLCVPHGPRRGYPTFLHV*KPLLQL
Trigger: CAGCTGAAGGAGCGGTTTGCAAACATGAAGGAAGGT...AGGATACCCCCTCCTCGGCCCATGAGGCACGCACAGTGACTTATTTAAGACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp TGTCACCTAGAGGGAGGCAGAAGTAATACAGTGTTTAAAGAATGTGTCTTGTTCGGCAGGAGCCCTGCATaGCCATCTGCAGGACCCGTG +
Preference number: 4 (lower is better)
Translates to: CHLEGGRSNTVFKECVLFGRSPA*PSAGPV
Trigger: CACGGGTCCTGCAGATGGCCATGCAGGGCTCCTGCC...GAACAAGACACATTCTTTAAACACTGTATTACTTCTGCCTCCCTCTAGGTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR GCA 90 bp GGTAGGGATGTGACGTGTGTCCATCCTGCCCTTGGGAACCAGAACACAGGGCTGAAATACAAAAGTAAATaGACTTGTTCAACGTGCCCG +
Preference number: 4 (lower is better)
Translates to: GRDVTCVHPALGNQNTGLKYKSK*TCSTCP
Trigger: CGGGCACGTTGAACAAGTGCATTTACTTTTGTATTT...CAGCCCTGTGTTCTGGTTCCCAAGGGCAGGATGGACACACGTCACATCCCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CCA 90 bp CTCCCCAAGTCCACAAACAGGTCGTCGTCGGTCATCTTGATCTCATCAATCATCATCTCATCAATCATCTaGGCCACCAGGTCGAAGGAG +
Preference number: 4 (lower is better)
Translates to: LPKSTNRSSSVILISSIIISSII*ATRSKE
Trigger: CTCCTTCGACCTGGTGGCCCAGATGATTGATGAGAT...GATGATTGATGAGATCAAGATGACCGACGACGACCTGTTTGTGGACTTGGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478937.3
CDS-3UTR CCA 90 bp TGTCACCTAGAGGGAGGCAGAAGTAATACAGTGTTTAAAGAATGTGTCTTGTTCCAGTTTGGTTCTTCTTaGGCTTCCGCTCGGGGTTCG +
Preference number: 4 (lower is better)
Translates to: CHLEGGRSNTVFKECVLFQFGSS*ASARGS
Trigger: CGAACCCCGAGCGGAAGCCCAAGAAGAACCAAACTG...GAACAAGACACATTCTTTAAACACTGTATTACTTCTGCCTCCCTCTAGGTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS CCA 90 bp AACTGCGGTCCCGGCGGGAAGGGGCCCAGGAAGGACCGGTGCGTCTaGGCGGAGGACGCCGCGCCGCCTGCGGAGGACGCCGCCGGGGCC +
Preference number: 5 (lower is better)
Translates to: NCGPGGKGPRKDRCV*AEDAAPPAEDAAGA
Trigger: GGCCCCGGCGGCGTCCTCCGCAGGCGGCGCGGCGTCCTCCGCCCAGACGCACCGGTCCTTCCTGGGCCCCTTCCCGCCGGGACCGCAGTT
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS GCA 90 bp AGCGCGAACTGCGGTCCCGGCGGGAAGGGGCCCAGGAAGGACCGGTaGGTCTGGGCGGAGGACGCCGCGCCGCCTGCGGAGGACGCCGCC +
Preference number: 5 (lower is better)
Translates to: SANCGPGGKGPRKDR*VWAEDAAPPAEDAA
Trigger: GGCGGCGTCCTCCGCAGGCGGCGCGGCGTCCTCCGCCCAGACGCACCGGTCCTTCCTGGGCCCCTTCCCGCCGGGACCGCAGTTCGCGCT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS CCA 90 bp AGGGAGGCGGCATGCCGAGGGACACCCACACCGCGGACGGCCCCGTaGCGCTGGCCTGTGGGATCCCGGGCGCGGCCTGGGCCAGGGCCA +
Preference number: 5 (lower is better)
Translates to: REAACRGTPTPRTAP*RWPVGSRARPGPGP
Trigger: TGGCCCTGGCCCAGGCCGCGCCCGGGATCCCACAGGCCAGCGCCACGGGGCCGTCCGCGGTGTGGGTGTCCCTCGGCATGCCGCCTCCCT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457590.2
CDS CCA 90 bp AGGCCGAGGCGCTGGCCGCCGCCTGCAGCGGGCTCGGGCCCAGTGTaGCGCTGCCACATGCAGCCCCGCGGCCGACACGGGCTCCAAACG +
Preference number: 5 (lower is better)
Translates to: RPRRWPPPAAGSGPV*RCHMQPRGRHGLQT
Trigger: CGTTTGGAGCCCGTGTCGGCCGCGGGGCTGCATGTGGCAGCGCCACACTGGGCCCGAGCCCGCTGCAGGCGGCGGCCAGCGCCTCGGCCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446286.1
ENST00000457590.2
CDS CCA 90 bp CGGACGGCAGGGCTCGGCGCTTGGGGGACACGCCTGCGCTCAAGCTaGGCGTCCCCGCAGATGCTCGCTTCCGCCGGCCGCGCCTGCGAC +
Preference number: 5 (lower is better)
Translates to: RTAGLGAWGTRLRSS*ASPQMLASAGRACD
Trigger: GTCGCAGGCGCGGCCGGCGGAAGCGAGCATCTGCGGGGACGCCCAGCTTGAGCGCAGGCGTGTCCCCCAAGCGCCGAGCCCTGCCGTCCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000482433.1
CDS GCA 90 bp GTCCCCGCAGATGCTCGCTTCCGCCGGCCGCGCCTGCGACTGTCCTaGCCGTGGCTCGGCACACAGTCCCCACGGGCGCTGGCGGTCAGG +
Preference number: 5 (lower is better)
Translates to: VPADARFRRPRLRLS*PWLGTQSPRALAVR
Trigger: CCTGACCGCCAGCGCCCGTGGGGACTGTGTGCCGAGCCACGGGCAGGACAGTCGCAGGCGCGGCCGGCGGAAGCGAGCATCTGCGGGGAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000482433.1
CDS GCA 90 bp GCCCGCACAGCGGTAGGCCGCCCTCCCCTGCCTCCTTGCCGCGGCTaGCCTCGCCCTTCAGCCCAGCCAGGCCGTCCAGCTGCCTCTTGC +
Preference number: 5 (lower is better)
Translates to: ARTAVGRPPLPPCRG*PRPSAQPGRPAASC
Trigger: GCAAGAGGCAGCTGGACGGCCTGGCTGGGCTGAAGGGCGAGGGCAGCCGCGGCAAGGAGGCAGGGGAGGGCGGCCTACCGCTGTGCGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS GCA 90 bp GGCCGCCGCCTGCAGCGGGCTCGGGCCCAGTGTGGCGCTGCCACATaGAGCCCCGCGGCCGACACGGGCTCCAAACGGATGAGCAGAGGC +
Preference number: 5 (lower is better)
Translates to: GRRLQRARAQCGAAT*SPAADTGSKRMSRG
Trigger: GCCTCTGCTCATCCGTTTGGAGCCCGTGTCGGCCGCGGGGCTGCATGTGGCAGCGCCACACTGGGCCCGAGCCCGCTGCAGGCGGCGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446286.1
ENST00000457590.2
CDS CCA 90 bp GCAGATGCTCGCTTCCGCCGGCCGCGCCTGCGACTGTCCTGCCCGTaGCTCGGCACACAGTCCCCACGGGCGCTGGCGGTCAGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: ADARFRRPRLRLSCP*LGTQSPRALAVRGL
Trigger: CAGCCCCCTGACCGCCAGCGCCCGTGGGGACTGTGTGCCGAGCCACGGGCAGGACAGTCGCAGGCGCGGCCGGCGGAAGCGAGCATCTGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000482433.1
CDS CCA 90 bp CCCGGGCCTTGGCGGCCTTGCCGCTCAGCAGTGGGGTCTTGTCCGTaGGCCCGCACAGCGGTAGGCCGCCCTCCCCTGCCTCCTTGCCGC +
Preference number: 5 (lower is better)
Translates to: PGPWRPCRSAVGSCP*ARTAVGRPPLPPCR
Trigger: GCGGCAAGGAGGCAGGGGAGGGCGGCCTACCGCTGTGCGGGCCCACGGACAAGACCCCACTGCTGAGCGGCAAGGCCGCCAAGGCCCGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS CCA 90 bp GCACGGAGGAGCCGGCCACGGAGCCGAGGTTGGCCTGCAGGGACATaGGGCCGAGCGCGAACTGCGGTCCCGGCGGGAAGGGGCCCAGGA +
Preference number: 5 (lower is better)
Translates to: ARRSRPRSRGWPAGT*GRARTAVPAGRGPG
Trigger: TCCTGGGCCCCTTCCCGCCGGGACCGCAGTTCGCGCTCGGCCCCATGTCCCTGCAGGCCAACCTCGGCTCCGTGGCCGGCTCCTCCGTGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS GCA 90 bp TCAAGCTGGGCGTCCCCGCAGATGCTCGCTTCCGCCGGCCGCGCCTaGGACTGTCCTGCCCGTGGCTCGGCACACAGTCCCCACGGGCGC +
Preference number: 5 (lower is better)
Translates to: SSWASPQMLASAGRA*DCPARGSAHSPHGR
Trigger: GCGCCCGTGGGGACTGTGTGCCGAGCCACGGGCAGGACAGTCGCAGGCGCGGCCGGCGGAAGCGAGCATCTGCGGGGACGCCCAGCTTGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000482433.1
CDS GCA 90 bp GCGCTTGGGGGACACGCCTGCGCTCAAGCTGGGCGTCCCCGCAGATaGTCGCTTCCGCCGGCCGCGCCTGCGACTGTCCTGCCCGTGGCT +
Preference number: 5 (lower is better)
Translates to: ALGGHACAQAGRPRR*SLPPAAPATVLPVA
Trigger: AGCCACGGGCAGGACAGTCGCAGGCGCGGCCGGCGGAAGCGAGCATCTGCGGGGACGCCCAGCTTGAGCGCAGGCGTGTCCCCCAAGCGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000482433.1
CDS GCA 90 bp AAGGCCAGCGACGGACGGCAGGGCTCGGCGCTTGGGGGACACGCCTaGGCTCAAGCTGGGCGTCCCCGCAGATGCTCGCTTCCGCCGGCC +
Preference number: 5 (lower is better)
Translates to: KASDGRQGSALGGHA*AQAGRPRRCSLPPA
Trigger: GGCCGGCGGAAGCGAGCATCTGCGGGGACGCCCAGCTTGAGCGCAGGCGTGTCCCCCAAGCGCCGAGCCCTGCCGTCCGTCGCTGGCCTT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000482433.1
CDS-3UTR CAA 90 bp GGCAGGCGCGGGCCTGGGGACGAGATAGCACCGGGGCAGGCTGTGGCGAATCCGGCGTCCGAGCCCTCCTaGCCGCGCTGCGAGGGGAAG +
Preference number: 5 (lower is better)
Translates to: GRRGPGDEIAPGQAVANPASEPS*PRCEGK
Trigger: CTTCCCCTCGCAGCGCGGCAAGGAGGGCTCGGACGC...CGGATTCGCCACAGCCTGCCCCGGTGCTATCTCGTCCCCAGGCCCGCGCCTGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CAA 90 bp CGGCAGGCCGGCGGGCACCATGCCGCGGGCGCGAGTTGGTCCACACCGTCCTTGGCGACGGGCCTGCCTTaGGTACGGGAGCAGCGCGTC +
Preference number: 5 (lower is better)
Translates to: RQAGGHHAAGASWSTPSLATGLP*VREQRV
Trigger: GACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGC...CAAGGACGGTGTGGACCAACTCGCGCCCGCGGCATGGTGCCCGCCGGCCTGCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CAA 90 bp CGTCACCGCGCAGGCCCCTTCACATGCAAGGGCGCAACCCACGCCCCGGAGGGTGAGGGGCGGGCGCCCTaGTGCGGGAGGGAGGTGAGC +
Preference number: 5 (lower is better)
Translates to: RHRAGPFTCKGATHAPEGEGRAP*CGREVS
Trigger: GCTCACCTCCCTCCCGCACAAGGGCGCCCGCCCCTC...ACCCTCCGGGGCGTGGGTTGCGCCCTTGCATGTGAAGGGGCCTGCGCGGTGACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457590.2
CDS GCA 90 bp ACGGAGCCGAGGTTGGCCTGCAGGGACATGGGGCCGAGCGCGAACTaGGGTCCCGGCGGGAAGGGGCCCAGGAAGGACCGGTGCGTCTGG +
Preference number: 5 (lower is better)
Translates to: TEPRLACRDMGPSAN*GPGGKGPRKDRCVW
Trigger: CCAGACGCACCGGTCCTTCCTGGGCCCCTTCCCGCCGGGACCGCAGTTCGCGCTCGGCCCCATGTCCCTGCAGGCCAACCTCGGCTCCGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS GCA 90 bp AGCGACTGCAGCACGGAGGAGCCGGCCACGGAGCCGAGGTTGGCCTaGAGGGACATGGGGCCGAGCGCGAACTGCGGTCCCGGCGGGAAG +
Preference number: 5 (lower is better)
Translates to: SDCSTEEPATEPRLA*RDMGPSANCGPGGK
Trigger: CTTCCCGCCGGGACCGCAGTTCGCGCTCGGCCCCATGTCCCTGCAGGCCAACCTCGGCTCCGTGGCCGGCTCCTCCGTGCTGCAGTCGCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398665.8
ENST00000446286.1
ENST00000457590.2
CDS-3UTR CAA 90 bp CGTCACCGCGCAGGCCCCTTCACATGCAAGGGCGCAACCCACGCCCCGGAGGGTCCGCGGAGCGCGCGGTaGTCCTGCTCCAGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: RHRAGPFTCKGATHAPEGPRSAR*SCSSCS
Trigger: GGAGCAGCTGGAGCAGGACAACCGCGCGCTCCGCGG...ACCCTCCGGGGCGTGGGTTGCGCCCTTGCATGTGAAGGGGCCTGCGCGGTGACG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CAA 90 bp GTGGGAGCCCGGCAGGCCGGCGGGCACCATGCCGCGGGCGCGAGTTGGTCCACACTGACCGGGAGCTTGTaGGGCTGCACGGTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: VGARQAGGHHAAGASWSTLTGSL*GCTVLS
Trigger: GCTCAGCACCGTGCAGCCCAACAAGCTCCCGGTCAG...TGTGGACCAACTCGCGCCCGCGGCATGGTGCCCGCCGGCCTGCCGGGCTCCCAC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CAA 90 bp CGGCAGGCCGGCGGGCACCATGCCGCGGGCGCGAGTTGGTCCACACCGTCCTTGCTCAGCAGTGGGGTCTaGTCCGTGGGCCCGCACAGC +
Preference number: 5 (lower is better)
Translates to: RQAGGHHAAGASWSTPSLLSSGV*SVGPHS
Trigger: GCTGTGCGGGCCCACGGACAAGACCCCACTGCTGAG...CAAGGACGGTGTGGACCAACTCGCGCCCGCGGCATGGTGCCCGCCGGCCTGCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CAA 90 bp CAGGCGCGGGCCTGGGGACGAGATAGCACCGGGGCAGGCTGTGGCGAATCCGCTCGGGCCTTGGCGGCCTaGCCGCTCAGCAGTGGGGTC +
Preference number: 5 (lower is better)
Translates to: QARAWGRDSTGAGCGESARALAA*PLSSGV
Trigger: GACCCCACTGCTGAGCGGCAAGGCCGCCAAGGCCCG...AGCGGATTCGCCACAGCCTGCCCCGGTGCTATCTCGTCCCCAGGCCCGCGCCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS TCA 90 bp GGCCCCCGCCGAAGGTGCAGCCGTTGGCAGGGTTGGTGCCCGGGCTaGGTCCGTCAGCCCCCGACAGGGAGCCGGGAAAGCCTTTCCTGG +
Preference number: 5 (lower is better)
Translates to: GPRRRCSRWQGWCPG*VRQPPTGSRESLSW
Trigger: CCAGGAAAGGCTTTCCCGGCTCCCTGTCGGGGGCTGACGGACTCAGCCCGGGCACCAACCCTGCCAACGGCTGCACCTTCGGCGGGGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS TCA 90 bp CAGCGGACGACACGTGCACCAGGCCTGCGGCGGCCGGCACAGAGCTaGACAGCGACTGCAGCACGGAGGAGCCGGCCACGGAGCCGAGGT +
Preference number: 5 (lower is better)
Translates to: QRTTRAPGLRRPAQS*TATAARRSRPRSRG
Trigger: ACCTCGGCTCCGTGGCCGGCTCCTCCGTGCTGCAGTCGCTGTTCAGCTCTGTGCCGGCCGCCGCAGGCCTGGTGCACGTGTCGTCCGCTG
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398665.8
ENST00000446286.1
ENST00000457590.2
CDS GCA 90 bp GCGTCAGGCTCCAGCTCGCGGCCCAGGGCGCCCTTCCCACGCAGGTaGAGGGACAGGGCGTCGTCAGGCGGCACACAGGACTTGAGCTGC +
Preference number: 5 (lower is better)
Translates to: ASGSSSRPRAPFPRR*RDRASSGGTQDLSC
Trigger: GCAGCTCAAGTCCTGTGTGCCGCCTGACGACGCCCTGTCCCTGCACCTGCGTGGGAAGGGCGCCCTGGGCCGCGAGCTGGAGCCTGACGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398665.8
ENST00000482433.1
ENST00000608122.1
CDS GCA 90 bp ACGTGCACCAGGCCTGCGGCGGCCGGCACAGAGCTGAACAGCGACTaGAGCACGGAGGAGCCGGCCACGGAGCCGAGGTTGGCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: TCTRPAAAGTELNSD*STEEPATEPRLACR
Trigger: CCTGCAGGCCAACCTCGGCTCCGTGGCCGGCTCCTCCGTGCTGCAGTCGCTGTTCAGCTCTGTGCCGGCCGCCGCAGGCCTGGTGCACGT
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398665.8
ENST00000446286.1
ENST00000457590.2
CDS CCA 90 bp ACCAGAGTCCATGGGGGCGTCGGCGGGGCCGGCCACCTTGCCCTCTaGGCCCTTAGTGGGCGTGGCCGCGTTGCTCTTGCTCTCGCGCTG +
Preference number: 5 (lower is better)
Translates to: TRVHGGVGGAGHLAL*ALSGRGRVALALAL
Trigger: CAGCGCGAGAGCAAGAGCAACGCGGCCACGCCCACTAAGGGCCCAGAGGGCAAGGTGGCCGGCCCCGCCGACGCCCCCATGGACTCTGGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS CCA 90 bp GAAGCTTCTGCAGCGCGGGCGGGGTGGGCGCCACCAGCAGCGGGTTaGGGGAGTGCCGCTGCACGCTCGGAGGTAGCTGGTAGAACGGGC +
Preference number: 5 (lower is better)
Translates to: EASAARAGWAPPAAG*GSAAARSEVAGRTG
Trigger: GCCCGTTCTACCAGCTACCTCCGAGCGTGCAGCGGCACTCCCCCAACCCGCTGCTGGTGGCGCCCACCCCGCCCGCGCTGCAGAAGCTTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS CCA 90 bp GGTGCGGCTAGGCCAGACAGCTTCTCCAGGCGCGGCCGGCCGACGTaGCTAGGGGTACAGGGCACCACCTCCTGGTCCAGGGGTGAGGCC +
Preference number: 5 (lower is better)
Translates to: GAARPDSFSRRGRPT*LGVQGTTSWSRGEA
Trigger: GGCCTCACCCCTGGACCAGGAGGTGGTGCCCTGTACCCCTAGCCACGTCGGCCGGCCGCGCCTGGAGAAGCTGTCTGGCCTAGCCGCACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000482433.1
CDS-3UTR CAA 90 bp GTCCTCACAGCACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCGCCACCAGCAGCGGGTaGGGGGAGTGCCGCTGCACG +
Preference number: 5 (lower is better)
Translates to: VLTAPSRSTWPAASPRRPATSSG*GECRCT
Trigger: CGTGCAGCGGCACTCCCCCAACCCGCTGCTGGTGGC...GGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGTGCTGTGAGGAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CAA 90 bp GAGGGAGCAGCTCGGGAGCACGTGAGTGGTGCTTCCCGACGTCCGTCAGCCGCCCCGCGGAGCGCGCGGTaGTCCTGCTCCAGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: EGAAREHVSGASRRPSAAPRSAR*SCSSCS
Trigger: GGAGCAGCTGGAGCAGGACAACCGCGCGCTCCGCGG...GGCGGCTGACGGACGTCGGGAAGCACCACTCACGTGCTCCCGAGCTGCTCCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586024.1
CDS-3UTR CAA 90 bp GGCAGGCGCGGGCCTGGGGACGAGATAGCACCGGGGCAGGCTGTGGCGAATCCGGCCGCCTCGGGGCCCTaGTGGGGAAGAGAAGCACCA +
Preference number: 5 (lower is better)
Translates to: GRRGPGDEIAPGQAVANPAASGP*WGREAP
Trigger: TGGTGCTTCTCTTCCCCACAAGGGCCCCGAGGCGGC...CGGATTCGCCACAGCCTGCCCCGGTGCTATCTCGTCCCCAGGCCCGCGCCTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CAA 90 bp GAATGTGGTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGCGCGTCCGAGCCCTCCTaGCCGCGCTGCGAGGGGAAG +
Preference number: 5 (lower is better)
Translates to: ECGGDGPAFGTGAARRGSASEPS*PRCEGK
Trigger: CTTCCCCTCGCAGCGCGGCAAGGAGGGCTCGGACGC...GCTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCACATTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS TCA 90 bp AGTCCGTCAGCCCCCGACAGGGAGCCGGGAAAGCCTTTCCTGGGGTaGGCGGCCAGCTTGGCATCGGCAGAGGGCTCCTCCAGGGCGGGC +
Preference number: 5 (lower is better)
Translates to: SPSAPDREPGKPFLG*AASLASAEGSSRAG
Trigger: GCCCGCCCTGGAGGAGCCCTCTGCCGATGCCAAGCTGGCCGCTCACCCCAGGAAAGGCTTTCCCGGCTCCCTGTCGGGGGCTGACGGACT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS GCA 90 bp CCAGCTGCCTCTTGCTCAGGAAAGGGTTGGCGTCCGAGCCCTCCTTaGCGCGCTGCGAGGGGAAGCTCAGCGGGGAGCTCAGGCCGGCCG +
Preference number: 5 (lower is better)
Translates to: PAASCSGKGWRPSPP*RAARGSSAGSSGRP
Trigger: CGGCCGGCCTGAGCTCCCCGCTGAGCTTCCCCTCGCAGCGCGGCAAGGAGGGCTCGGACGCCAACCCTTTCCTGAGCAAGAGGCAGCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS CCA 90 bp GAGGCAGCGAGAACTTGGTGCAGTCCAGCTCCAGGTGCAGCCGGCTaGCGTCAGGCTCCAGCTCGCGGCCCAGGGCGCCCTTCCCACGCA +
Preference number: 5 (lower is better)
Translates to: EAARTWCSPAPGAAG*RQAPARGPGRPSHA
Trigger: TGCGTGGGAAGGGCGCCCTGGGCCGCGAGCTGGAGCCTGACGCCAGCCGGCTGCACCTGGAGCTGGACTGCACCAAGTTCTCGCTGCCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398665.8
ENST00000482433.1
ENST00000608122.1
CDS CCA 90 bp TGCGACTGTCCTGCCCGTGGCTCGGCACACAGTCCCCACGGGCGCTaGCGGTCAGGGGGCTGTGCTTGCTGGAGGGCGACTGCTTGGCAC +
Preference number: 5 (lower is better)
Translates to: CDCPARGSAHSPHGR*RSGGCACWRATAWH
Trigger: GTGCCAAGCAGTCGCCCTCCAGCAAGCACAGCCCCCTGACCGCCAGCGCCCGTGGGGACTGTGTGCCGAGCCACGGGCAGGACAGTCGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000482433.1
CDS-3UTR CAA 90 bp GGAATGTGGTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGGTGGCCGCGTTGCTCTaGCTCTCGCGCTGCTGGCGG +
Preference number: 5 (lower is better)
Translates to: GMWWRRACLWYGSSASGEVAALL*LSRCWR
Trigger: CCGCCAGCAGCGCGAGAGCAAGAGCAACGCGGCCAC...CTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCACATTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CAA 90 bp GGACCAGTCCCAGCCTCCTGCGGCGCGTGCCGCCGATTCACAGTGGAGCTCCCGCTGGAGGGCGACTGCTaGGCACTGCCCGCACCAGTG +
Preference number: 5 (lower is better)
Translates to: GPVPASCGACRRFTVELPLEGDC*ALPAPV
Trigger: CACTGGTGCGGGCAGTGCCAAGCAGTCGCCCTCCAG...CGGGAGCTCCACTGTGAATCGGCGGCACGCGCCGCAGGAGGCTGGGACTGGTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CAA 90 bp GACCAGGGACTCGGCCGTCTCTGCCATCAACCCTGTGGCGTATCCGGCCCGTGGCGGGCCTTGGCGGCCTaGCCGCTCAGCAGTGGGGTC +
Preference number: 5 (lower is better)
Translates to: DQGLGRLCHQPCGVSGPWRALAA*PLSSGV
Trigger: GACCCCACTGCTGAGCGGCAAGGCCGCCAAGGCCCG...CCACGGGCCGGATACGCCACAGGGTTGATGGCAGAGACGGCCGAGTCCCTGGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CAA 90 bp CAAACTGGACCAGTCCCAGCCTCCTGCGGCGCGTGCCGCCGATTCACAGTGGAGTCGCGGTCCCGGGCCTaGGCGGCCTTGCCGCTCAGC +
Preference number: 5 (lower is better)
Translates to: QTGPVPASCGACRRFTVESRSRA*AALPLS
Trigger: GCTGAGCGGCAAGGCCGCCAAGGCCCGGGACCGCGA...CTCCACTGTGAATCGGCGGCACGCGCCGCAGGAGGCTGGGACTGGTCCAGTTTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CAA 90 bp CCGGCGGGCACCATGCCGCGGGCGCGAGTTGGTCCACACCGTCCTTGCATAGGTGCCACGGAGCCGAGGTaGGCCTGCAGGGACATGGGG +
Preference number: 5 (lower is better)
Translates to: PAGTMPRARVGPHRPCIGATEPR*ACRDMG
Trigger: CCCCATGTCCCTGCAGGCCAACCTCGGCTCCGTGGC...ACCTATGCAAGGACGGTGTGGACCAACTCGCGCCCGCGGCATGGTGCCCGCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CAA 90 bp CGTCACCGCGCAGGCCCCTTCACATGCAAGGGCGCAACCCACGCCCCGGAGGGTAGCTCCCGTCCGTCCTaGCCTCTGCCGTCCAGGGGT +
Preference number: 5 (lower is better)
Translates to: RHRAGPFTCKGATHAPEGSSRPS*PLPSRG
Trigger: ACCCCTGGACGGCAGAGGCAAGGACGGACGGGAGCT...ACCCTCCGGGGCGTGGGTTGCGCCCTTGCATGTGAAGGGGCCTGCGCGGTGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS GCA 90 bp CACTCTCAGGATCTGAGAAGCCGGAATCGGAGGGCAGGTCTCCCTTaGTGGCCTCGGGCAACGGGCCCTGGGCGGCCCCACCAAGCCGGG +
Preference number: 5 (lower is better)
Translates to: HSQDLRSRNRRAGLP*WPRATGPGRPHQAG
Trigger: CCCGGCTTGGTGGGGCCGCCCAGGGCCCGTTGCCCGAGGCCAGCAAGGGAGACCTGCCCTCCGATTCCGGCTTCTCAGATCCTGAGAGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000482433.1
CDS GCA 90 bp TGCCTCTCGCAGAGCAGACCTCACCCCAAGGGCACAACCCAGCCCTaGGAGGGCAGAACTGCCCGGGCTTCGGTGGCCTCTCCAGGGCCC +
Preference number: 5 (lower is better)
Translates to: CLSQSRPHPKGTTQP*EGRTARASVASPGP
Trigger: GGGCCCTGGAGAGGCCACCGAAGCCCGGGCAGTTCTGCCCTCGCAGGGCTGGGTTGTGCCCTTGGGGTGAGGTCTGCTCTGCGAGAGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482433.1
CDS CCA 90 bp TCTCAGGATCTGAGAAGCCGGAATCGGAGGGCAGGTCTCCCTTGCTaGCCTCGGGCAACGGGCCCTGGGCGGCCCCACCAAGCCGGGGAC +
Preference number: 5 (lower is better)
Translates to: SQDLRSRNRRAGLPC*PRATGPGRPHQAGD
Trigger: GTCCCCGGCTTGGTGGGGCCGCCCAGGGCCCGTTGCCCGAGGCCAGCAAGGGAGACCTGCCCTCCGATTCCGGCTTCTCAGATCCTGAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000482433.1
CDS CCA 90 bp CCACCCCGGAAAAGCTGCCCATGGCGTGCGAGTTGGTCAGTCTGGTaGCAGCGGACGACACGTGCACCAGGCCTGCGGCGGCCGGCACAG +
Preference number: 5 (lower is better)
Translates to: PPRKSCPWRASWSVW*QRTTRAPGLRRPAQ
Trigger: CTGTGCCGGCCGCCGCAGGCCTGGTGCACGTGTCGTCCGCTGCCACCAGACTGACCAACTCGCACGCCATGGGCAGCTTTTCCGGGGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398665.8
ENST00000446286.1
ENST00000457590.2
CDS CCA 90 bp CTGCCACCCCGGAAAAGCTGCCCATGGCGTGCGAGTTGGTCAGTCTaGTGGCAGCGGACGACACGTGCACCAGGCCTGCGGCGGCCGGCA +
Preference number: 5 (lower is better)
Translates to: LPPRKSCPWRASWSV*WQRTTRAPGLRRPA
Trigger: TGCCGGCCGCCGCAGGCCTGGTGCACGTGTCGTCCGCTGCCACCAGACTGACCAACTCGCACGCCATGGGCAGCTTTTCCGGGGTGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398665.8
ENST00000446286.1
ENST00000457590.2
CDS-3UTR CAA 90 bp CGCCGATTCACAGTGGAGCTCCCGTCCGTCCTTGCCTCTGCCGTCCAGGGGTGGCAGCCGTTGGCAGGGTaGGTGCCCGGGCTGAGTCCG +
Preference number: 5 (lower is better)
Translates to: RRFTVELPSVLASAVQGWQPLAG*VPGLSP
Trigger: CGGACTCAGCCCGGGCACCAACCCTGCCAACGGCTG...CCACCCCTGGACGGCAGAGGCAAGGACGGACGGGAGCTCCACTGTGAATCGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CAA 90 bp CCCACCCACAGTCAGCAGCAGCAGCACAGGTCCCCGCCAGCTGCCCACGGAAACCCGAAGGTGCAGCCGTaGGCAGGGTTGGTGCCCGGG +
Preference number: 5 (lower is better)
Translates to: PTHSQQQQHRSPPAAHGNPKVQP*AGLVPG
Trigger: CCCGGGCACCAACCCTGCCAACGGCTGCACCTTCGG...GTTTCCGTGGGCAGCTGGCGGGGACCTGTGCTGCTGCTGCTGACTGTGGGTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CAA 90 bp CCGTCCTCACAGCACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCGCCGCCTCGGGGCCCTaGTGGGGAAGAGAAGCACCA +
Preference number: 5 (lower is better)
Translates to: PSSQHHRAAHGQLRHRAGAASGP*WGREAP
Trigger: TGGTGCTTCTCTTCCCCACAAGGGCCCCGAGGCGGC...GCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGTGCTGTGAGGACGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CAA 90 bp CAGGCGCGGGCCTGGGGACGAGATAGCACCGGGGCAGGCTGTGGCGAATCCGCTCCCATGGCGTGCGAGTaGGTCAGTCTGGTGGCAGCG +
Preference number: 5 (lower is better)
Translates to: QARAWGRDSTGAGCGESAPMACE*VSLVAA
Trigger: CGCTGCCACCAGACTGACCAACTCGCACGCCATGGG...AGCGGATTCGCCACAGCCTGCCCCGGTGCTATCTCGTCCCCAGGCCCGCGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CAA 90 bp CCCACAGCAGCTGGGAGAACCAGCACAGGCTCCAAGGGATGGGTGCCAGGCGTGGGCCAGGCTCGGGGCTaGGGGCTCAGGCAGAGGCAC +
Preference number: 5 (lower is better)
Translates to: PTAAGRTSTGSKGWVPGVGQARG*GLRQRH
Trigger: GTGCCTCTGCCTGAGCCCCAAGCCCCGAGCCTGGCC...CACGCCTGGCACCCATCCCTTGGAGCCTGTGCTGGTTCTCCCAGCTGCTGTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CAA 90 bp GTGCTTCCCGACGTCCGTCAGCCGCCCGTGAGAGCCCGCCTCCGGGGACAGCCTCCTCCGGGGACAGCCTaGCAGCAACGGTTTGGTGCA +
Preference number: 5 (lower is better)
Translates to: VLPDVRQPPVRARLRGQPPPGTA*QQRFGA
Trigger: TGCACCAAACCGTTGCTGCAAGGCTGTCCCCGGAGG...AGGCTGTCCCCGGAGGCGGGCTCTCACGGGCGGCTGACGGACGTCGGGAAGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586024.1
CDS GCA 90 bp GCCTTGAGCAGCTGCAAGCTCTGGCCGCGGAGCGCGCGGTTGTCCTaGTCCAGCTGCTCCGACTGCTCCCGCAGCTGCTGGTTATGGGCG +
Preference number: 5 (lower is better)
Translates to: ALSSCKLWPRSARLS*SSCSDCSRSCWLWA
Trigger: CGCCCATAACCAGCAGCTGCGGGAGCAGTCGGAGCAGCTGGAGCAGGACAACCGCGCGCTCCGCGGCCAGAGCTTGCAGCTGCTCAAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398665.8
ENST00000586024.1
ENST00000591498.1
CDS GCA 90 bp GGCCGGAACGTGAACAGGGAGTTCTGGCTGAGGGCGGAGCTGGCCTaGAGCGGGCTGTCCGCCGACTTGGCCAGGCCGATGTCGGAGATG +
Preference number: 5 (lower is better)
Translates to: GRNVNREFWLRAELA*SGLSADLARPMSEM
Trigger: CATCTCCGACATCGGCCTGGCCAAGTCGGCGGACAGCCCGCTGCAGGCCAGCTCCGCCCTCAGCCAGAACTCCCTGTTCACGTTCCGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS GCA 90 bp CCCATGGCGTGCGAGTTGGTCAGTCTGGTGGCAGCGGACGACACGTaGACCAGGCCTGCGGCGGCCGGCACAGAGCTGAACAGCGACTGC +
Preference number: 5 (lower is better)
Translates to: PMACELVSLVAADDT*TRPAAAGTELNSDC
Trigger: GCAGTCGCTGTTCAGCTCTGTGCCGGCCGCCGCAGGCCTGGTGCACGTGTCGTCCGCTGCCACCAGACTGACCAACTCGCACGCCATGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398665.8
ENST00000446286.1
ENST00000457590.2
CDS CCA 90 bp GCTCTCGAATGCAGCTCACTGGCAGCCGGCCTGCCGGGCACCGTGTaGTCCTGGCTCAGGTGCCGCCTCAGCACAATCTTGGCCGGGGAC +
Preference number: 5 (lower is better)
Translates to: ALECSSLAAGLPGTV*SWLRCRLSTILAGD
Trigger: GTCCCCGGCCAAGATTGTGCTGAGGCGGCACCTGAGCCAGGACCACACGGTGCCCGGCAGGCCGGCTGCCAGTGAGCTGCATTCGAGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000482433.1
CDS CCA 90 bp TCAGCCCAGCCAGGCCGTCCAGCTGCCTCTTGCTCAGGAAAGGGTTaGCGTCCGAGCCCTCCTTGCCGCGCTGCGAGGGGAAGCTCAGCG +
Preference number: 5 (lower is better)
Translates to: SAQPGRPAASCSGKG*RPSPPCRAARGSSA
Trigger: CGCTGAGCTTCCCCTCGCAGCGCGGCAAGGAGGGCTCGGACGCCAACCCTTTCCTGAGCAAGAGGCAGCTGGACGGCCTGGCTGGGCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS CCA 90 bp AGGAGGCTTCCGGGAGGCACGGCCGCCGCAGAGATGAAGAGGTTGTaGCCATTCTTGAGGTCGACCTCGCGGTCCCGGGCCTTGGCGGCC +
Preference number: 5 (lower is better)
Translates to: RRLPGGTAAAEMKRL*PFLRSTSRSRALAA
Trigger: GGCCGCCAAGGCCCGGGACCGCGAGGTCGACCTCAAGAATGGCCACAACCTCTTCATCTCTGCGGCGGCCGTGCCTCCCGGAAGCCTCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS CCA 90 bp CTGTGCCGCCTGCCACCCCGGAAAAGCTGCCCATGGCGTGCGAGTTaGTCAGTCTGGTGGCAGCGGACGACACGTGCACCAGGCCTGCGG +
Preference number: 5 (lower is better)
Translates to: LCRLPPRKSCPWRAS*SVWWQRTTRAPGLR
Trigger: CCGCAGGCCTGGTGCACGTGTCGTCCGCTGCCACCAGACTGACCAACTCGCACGCCATGGGCAGCTTTTCCGGGGTGGCAGGCGGCACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398665.8
ENST00000446286.1
ENST00000457590.2
CDS-3UTR CAA 90 bp ACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGCAGTGGGCGTGGCCGCGTaGCTCTTGCTCTCGCGCTGC +
Preference number: 5 (lower is better)
Translates to: TIAQHMASCVTAQAPSHAVGVAA*LLLSRC
Trigger: GCAGCGCGAGAGCAAGAGCAACGCGGCCACGCCCAC...TGCATGTGAAGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CAA 90 bp TGTCTGGGCTGCTGGGAGCTGCAACTGAGGGGTCTAGGGTCGGGGCTGACGCTGCAGCCGTTGGCAGGGTaGGTGCCCGGGCTGAGTCCG +
Preference number: 5 (lower is better)
Translates to: CLGCWELQLRGLGSGLTLQPLAG*VPGLSP
Trigger: CGGACTCAGCCCGGGCACCAACCCTGCCAACGGCTG...CAGCGTCAGCCCCGACCCTAGACCCCTCAGTTGCAGCTCCCAGCAGCCCAGACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CAA 90 bp CCTCCGAGGAATGTGGTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCCTCAGCAGTGGGGTCTaGTCCGTGGGCCCGCACAGC +
Preference number: 5 (lower is better)
Translates to: PPRNVVATGLPLVREQRVLSSGV*SVGPHS
Trigger: GCTGTGCGGGCCCACGGACAAGACCCCACTGCTGAG...GACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCACATTCCTCGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS TCA 90 bp GCGCTGCCACATGCAGCCCCGCGGCCGACACGGGCTCCAAACGGATaGGCAGAGGCGGAGGGCACCGCGTGGTTAAAGACACCCAACACC +
Preference number: 5 (lower is better)
Translates to: ALPHAAPRPTRAPNG*AEAEGTAWLKTPNT
Trigger: GGTGTTGGGTGTCTTTAACCACGCGGTGCCCTCCGCCTCTGCTCATCCGTTTGGAGCCCGTGTCGGCCGCGGGGCTGCATGTGGCAGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457590.2
CDS TCA 90 bp GAGCTCGAGCCTGCCAGAGTGTGGCTCCATGACACCCAGGGCCGCTaGGAAACCATCCAGCCGAGGGGCCCAGGCCTGCCTGCTGTGACG +
Preference number: 5 (lower is better)
Translates to: ELEPARVWLHDTQGR*ETIQPRGPGLPAVT
Trigger: CGTCACAGCAGGCAGGCCTGGGCCCCTCGGCTGGATGGTTTCTCAGCGGCCCTGGGTGTCATGGAGCCACACTCTGGCAGGCTCGAGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608122.1
CDS GCA 90 bp CGAGTTGGTCAGTCTGGTGGCAGCGGACGACACGTGCACCAGGCCTaGGGCGGCCGGCACAGAGCTGAACAGCGACTGCAGCACGGAGGA +
Preference number: 5 (lower is better)
Translates to: RVGQSGGSGRHVHQA*GGRHRAEQRLQHGG
Trigger: TCCTCCGTGCTGCAGTCGCTGTTCAGCTCTGTGCCGGCCGCCGCAGGCCTGGTGCACGTGTCGTCCGCTGCCACCAGACTGACCAACTCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398665.8
ENST00000446286.1
ENST00000457590.2
CDS CCA 90 bp GGGGTACAGGGCACCACCTCCTGGTCCAGGGGTGAGGCCAGGTACTaGGGCGTGTTCTGCTTCGACGAAGGCCGGCTCAGCACACCGCAG +
Preference number: 5 (lower is better)
Translates to: GVQGTTSWSRGEARY*GVFCFDEGRLSTPQ
Trigger: CTGCGGTGTGCTGAGCCGGCCTTCGTCGAAGCAGAACACGCCCCAGTACCTGGCCTCACCCCTGGACCAGGAGGTGGTGCCCTGTACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398665.8
ENST00000482433.1
ENST00000608122.1
CDS CCA 90 bp GAATGCAGCTCACTGGCAGCCGGCCTGCCGGGCACCGTGTGGTCCTaGCTCAGGTGCCGCCTCAGCACAATCTTGGCCGGGGACAGCCTA +
Preference number: 5 (lower is better)
Translates to: ECSSLAAGLPGTVWS*LRCRLSTILAGDSL
Trigger: TAGGCTGTCCCCGGCCAAGATTGTGCTGAGGCGGCACCTGAGCCAGGACCACACGGTGCCCGGCAGGCCGGCTGCCAGTGAGCTGCATTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000482433.1
CDS CCA 90 bp GGGGCCGCGGGTCCTGAGGGCTCAGCTTCATGCTGCCAGGCACGCTaGGGCTCTGGTAGGGAAGGCCGTTCTCCTTGGTGTGCTCAGCTC +
Preference number: 5 (lower is better)
Translates to: GAAGPEGSASCCQAR*GSGREGRSPWCAQL
Trigger: GAGCTGAGCACACCAAGGAGAACGGCCTTCCCTACCAGAGCCCCAGCGTGCCTGGCAGCATGAAGCTGAGCCCTCAGGACCCGCGGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000482433.1
CDS TCA 90 bp GCGCTGCCACATGCAGCCCCGCGGCCGACACGGGCTCCAAACGGATaGGCAGAGGCGGAGGGCACCGCGTGGTTAAAGACACCTCCAACT +
Preference number: 5 (lower is better)
Translates to: ALPHAAPRPTRAPNG*AEAEGTAWLKTPPT
Trigger: AGTTGGAGGTGTCTTTAACCACGCGGTGCCCTCCGCCTCTGCTCATCCGTTTGGAGCCCGTGTCGGCCGCGGGGCTGCATGTGGCAGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446286.1
CDS TCA 90 bp AGCTCCCAGAGCCTTGCCAGAGCCCGGGCGGCCACACCTAGCAGGTaGCCTCCACGGGAGAAAGTAATGCTCTGGTGGCCCTGCGCACGG +
Preference number: 5 (lower is better)
Translates to: SSQSLARARAATPSR*PPREKVMLWWPCAR
Trigger: CCGTGCGCAGGGCCACCAGAGCATTACTTTCTCCCGTGGAGGTCACCTGCTAGGTGTGGCCGCCCGGGCTCTGGCAAGGCTCTGGGAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457590.2
CDS GCA 90 bp CCTTGGTGTGCTCAGCTCTCGAATGCAGCTCACTGGCAGCCGGCCTaGCGGGCACCGTGTGGTCCTGGCTCAGGTGCCGCCTCAGCACAA +
Preference number: 5 (lower is better)
Translates to: PWCAQLSNAAHWQPA*RAPCGPGSGAASAQ
Trigger: TTGTGCTGAGGCGGCACCTGAGCCAGGACCACACGGTGCCCGGCAGGCCGGCTGCCAGTGAGCTGCATTCGAGAGCTGAGCACACCAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000482433.1
CDS GCA 90 bp CCTCCAACTGTGCCGCCTGCCACCCCGGAAAAGCTGCCCATGGCGTaGGAGTTGGTCAGTCTGGTGGCAGCGGACGACACGTGCACCAGG +
Preference number: 5 (lower is better)
Translates to: PPTVPPATPEKLPMA*ELVSLVAADDTCTR
Trigger: CCTGGTGCACGTGTCGTCCGCTGCCACCAGACTGACCAACTCGCACGCCATGGGCAGCTTTTCCGGGGTGGCAGGCGGCACAGTTGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000446286.1
CDS CCA 90 bp GTCGGAGATGGGCGAGAAGGTGGACTTCCACTTGCTGCTATTGACTaGCTCGCCGGCGGGCGCGGGCTTCCTTCCCGCCAAGCCACCACC +
Preference number: 5 (lower is better)
Translates to: VGDGREGGLPLAAID*LAGGRGLPSRQATT
Trigger: GGTGGTGGCTTGGCGGGAAGGAAGCCCGCGCCCGCCGGCGAGCCAGTCAATAGCAGCAAGTGGAAGTCCACCTTCTCGCCCATCTCCGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CAA 90 bp GTGGGAGCCCGGCAGGCCGGCGGGCACCATGCCGCGGGCGCGAGTTGGTCCACACACCTTCCTTCATGTTaGCAAACCGCTCCTTCAGCT +
Preference number: 5 (lower is better)
Translates to: VGARQAGGHHAAGASWSTHLPSC*QTAPSA
Trigger: AGCTGAAGGAGCGGTTTGCAAACATGAAGGAAGGTG...TGTGGACCAACTCGCGCCCGCGGCATGGTGCCCGCCGGCCTGCCGGGCTCCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CAA 90 bp ACAGGCCCAGGGCTCAGAACAGGAGGGTGTCCGCAGGCAGCCACCACACTAGTTTTGGGGCGCCCGCGCTaGCGGCCAGCCATCTTCCTC +
Preference number: 5 (lower is better)
Translates to: TGPGLRTGGCPQAATTLVLGRPR*RPAIFL
Trigger: GAGGAAGATGGCTGGCCGCAAGCGCGGGCGCCCCAA...AACTAGTGTGGTGGCTGCCTGCGGACACCCTCCTGTTCTGAGCCCTGGGCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CAA 90 bp CAAACTGGACCAGTCCCAGCCTCCTGCGGCGCGTGCCGCCGATTCACAGTGGAGGCAGTGTTCATCTTCTaGGGGCGCCCGCGCTTGCGG +
Preference number: 5 (lower is better)
Translates to: QTGPVPASCGACRRFTVEAVFIF*GRPRLR
Trigger: CCGCAAGCGCGGGCGCCCCAAGAAGATGAACACTGC...CTCCACTGTGAATCGGCGGCACGCGCCGCAGGAGGCTGGGACTGGTCCAGTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CAA 90 bp ATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGCAAGGGGCGGCACACAGGACTaGAGCTGCAGGAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: IAQHMASCVTAQAPSHARGGTQD*SCRSSC
Trigger: GCAGGAGCTCCTGCAGCTCAAGTCCTGTGTGCCGCC...CCTTGCATGTGAAGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CAA 90 bp TGGTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGCCGGCCAAGGTGGACTTCCACTaGCTGCTATTGACTGGCTCG +
Preference number: 5 (lower is better)
Translates to: WWRRACLWYGSSASGEPAKVDFH*LLLTGS
Trigger: CGAGCCAGTCAATAGCAGCAAGTGGAAGTCCACCTT...GGCCGGCTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CAA 90 bp ACAGGCCCAGGGCTCAGAACAGGAGGGTGTCCGCAGGCAGCCACCACACTAGTTGGGCTGTCCGCCGACTaGGCCAGGCCGATGTCGGAG +
Preference number: 5 (lower is better)
Translates to: TGPGLRTGGCPQAATTLVGLSAD*ARPMSE
Trigger: CTCCGACATCGGCCTGGCCAAGTCGGCGGACAGCCC...AACTAGTGTGGTGGCTGCCTGCGGACACCCTCCTGTTCTGAGCCCTGGGCCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CAA 90 bp GTCCTCACAGCACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCAGGTTGTGGCCATTCTaGAGGTCGACCTCGCGGTCC +
Preference number: 5 (lower is better)
Translates to: VLTAPSRSTWPAASPRRPRLWPF*RSTSRS
Trigger: GGACCGCGAGGTCGACCTCAAGAATGGCCACAACCT...GGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGTGCTGTGAGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CAA 90 bp TGGTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGCCGGCCGCAGAGATGAAGAGGTaGTGGCCATTCTTGAGGTCG +
Preference number: 5 (lower is better)
Translates to: WWRRACLWYGSSASGEPAAEMKR*WPFLRS
Trigger: CGACCTCAAGAATGGCCACAACCTCTTCATCTCTGC...GGCCGGCTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CAA 90 bp GGAATGTGGTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGGAACGGGGTTCGGCGTaGTCAGCGTCTAGTCAGCAC +
Preference number: 5 (lower is better)
Translates to: GMWWRRACLWYGSSASGEERGSA*SASSQH
Trigger: GTGCTGACTAGACGCTGACAACGCCGAACCCCGTTC...CTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCACATTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS TCA 90 bp CGATGTCGGAGATGGGCGAGAAGGTGGACTTCCACTTGCTGCTATTaGCTGGCTCGCCGGCGGGCGCGGGCTTCCTTCCCGCCAAGCCAC +
Preference number: 5 (lower is better)
Translates to: RCRRWARRWTSTCCY*LARRRARASFPPSH
Trigger: GTGGCTTGGCGGGAAGGAAGCCCGCGCCCGCCGGCGAGCCAGTCAATAGCAGCAAGTGGAAGTCCACCTTCTCGCCCATCTCCGACATCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS TCA 90 bp CCACGGTCGTGTGCCATTGGGCACTGCTGTGTGTGGAGCCGATCCTaGGTCAGGGGCCTCCCAGCTGTGAGTACAGGAGCCCCCGAGAGC +
Preference number: 5 (lower is better)
Translates to: PRSCAIGHCCVWSRS*VRGLPAVSTGAPES
Trigger: GCTCTCGGGGGCTCCTGTACTCACAGCTGGGAGGCCCCTGACTCAGGATCGGCTCCACACACAGCAGTGCCCAATGGCACACGACCGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482433.1
CDS TCA 90 bp GCTATGGCCGCCTTGAAGGCCGCAGCCATGCTTCCCAGCCCACGATaGGTGGTGCACTTCCATGACCACCCGGGGACAAAGGGCGGCCTC +
Preference number: 5 (lower is better)
Translates to: AMAALKAAAMLPSPR*VVHFHDHPGTKGGL
Trigger: GAGGCCGCCCTTTGTCCCCGGGTGGTCATGGAAGTGCACCACTCATCGTGGGCTGGGAAGCATGGCTGCGGCCTTCAAGGCGGCCATAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482433.1
CDS GCA 90 bp TCTCCAACTGTGCCGCCTGCCACCCCGGAAAAGCTGCCCATGGCGTaGGAGTTGGTCAGTCTGGTGGCAGCGGACGACACGTGCACCAGG +
Preference number: 5 (lower is better)
Translates to: SPTVPPATPEKLPMA*ELVSLVAADDTCTR
Trigger: CCTGGTGCACGTGTCGTCCGCTGCCACCAGACTGACCAACTCGCACGCCATGGGCAGCTTTTCCGGGGTGGCAGGCGGCACAGTTGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457590.2
CDS GCA 90 bp CACGGTGGCCTTCTCCAACTGTGCCGCCTGCCACCCCGGAAAAGCTaGCCATGGCGTGCGAGTTGGTCAGTCTGGTGGCAGCGGACGACA +
Preference number: 5 (lower is better)
Translates to: HGGLLQLCRLPPRKS*PWRASWSVWWQRTT
Trigger: TGTCGTCCGCTGCCACCAGACTGACCAACTCGCACGCCATGGGCAGCTTTTCCGGGGTGGCAGGCGGCACAGTTGGAGAAGGCCACCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457590.2
CDS GCA 90 bp CGGGGACAAAGGGCGGCCTCCCTGCTTCTGCCAATGAGGCCTCAGTaGAGGGGCGCAGCAAGGCGCTTCTGGAGTTGGCTGTTTGCCACC +
Preference number: 5 (lower is better)
Translates to: RGQRAASLLLPMRPQ*RGAARRFWSWLFAT
Trigger: GGTGGCAAACAGCCAACTCCAGAAGCGCCTTGCTGCGCCCCTGCACTGAGGCCTCATTGGCAGAAGCAGGGAGGCCGCCCTTTGTCCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482433.1
CDS CCA 90 bp GGCCTTCTCCAACTGTGCCGCCTGCCACCCCGGAAAAGCTGCCCATaGCGTGCGAGTTGGTCAGTCTGGTGGCAGCGGACGACACGTGCA +
Preference number: 5 (lower is better)
Translates to: GLLQLCRLPPRKSCP*RASWSVWWQRTTRA
Trigger: TGCACGTGTCGTCCGCTGCCACCAGACTGACCAACTCGCACGCCATGGGCAGCTTTTCCGGGGTGGCAGGCGGCACAGTTGGAGAAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457590.2
CDS CCA 90 bp GAAACCATGCCGCTACCAGCACGGAGGCCCACGGTCGTGTGCCATTaGGCACTGCTGTGTGTGGAGCCGATCCTGAGTCAGGGGCCTCCC +
Preference number: 5 (lower is better)
Translates to: ETMPLPARRPTVVCH*ALLCVEPILSQGPP
Trigger: GGGAGGCCCCTGACTCAGGATCGGCTCCACACACAGCAGTGCCCAATGGCACACGACCGTGGGCCTCCGTGCTGGTAGCGGCATGGTTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482433.1
CDS-3UTR CAA 90 bp CGTGTGGCCTGGAAGTGCACAGGAGCCGGGCATGGCGGGCGACACTCACCGCTCCTGTCGATGGCACGGTaGTACTTGTCGCAGAGCCTC +
Preference number: 5 (lower is better)
Translates to: RVAWKCTGAGHGGRHSPLLSMAR*YLSQSL
Trigger: GAGGCTCTGCGACAAGTACAACCGTGCCATCGACAG...GAGCGGTGAGTGTCGCCCGCCATGCCCGGCTCCTGTGCACTTCCAGGCCACACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478937.3
CDS-3UTR CAA 90 bp GATGTGACGTGTGTCCATCCTGCCCTTGGGAACCAGAACACAGGGCTGGCAGCTGCGGGGCCGGCCACCTaGCCCTCTGGGCCCTTAGTG +
Preference number: 5 (lower is better)
Translates to: DVTCVHPALGNQNTGLAAAGPAT*PSGPLV
Trigger: CACTAAGGGCCCAGAGGGCAAGGTGGCCGGCCCCGC...AGCTGCCAGCCCTGTGTTCTGGTTCCCAAGGGCAGGATGGACACACGTCACATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CAA 90 bp AATGTGGTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGCCGGAAGGCCGTTCTCCTaGGTGTGCTCAGCTCTCGAA +
Preference number: 5 (lower is better)
Translates to: NVVATGLPLVREQRVGGAGRPFS*VCSALE
Trigger: TTCGAGAGCTGAGCACACCAAGGAGAACGGCCTTCC...GGCTCCCCCGACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGCCACCACATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CAA 90 bp GGACCAGTCCCAGCCTCCTGCGGCGCGTGCCGCCGATTCACAGTGGAGCTCCCGCACAGGAGCAAGCACTaGAGAAGGTGGGCTCAGCAA +
Preference number: 5 (lower is better)
Translates to: GPVPASCGACRRFTVELPHRSKH*RRWAQQ
Trigger: TTGCTGAGCCCACCTTCTCAAGTGCTTGCTCCTGTG...CGGGAGCTCCACTGTGAATCGGCGGCACGCGCCGCAGGAGGCTGGGACTGGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS TCA 90 bp GAGCACTGCTGGGCTCGTCCTCAGAGCCTGGCTCCTCGTCTGAGGTaGGTGGGGAGTAGTGTGCCCCATTGGTCTGGCTCAGAGGCCGCT +
Preference number: 5 (lower is better)
Translates to: EHCWARPQSLAPRLR*VGSSVPHWSGSEAA
Trigger: AGCGGCCTCTGAGCCAGACCAATGGGGCACACTACTCCCCACTCACCTCAGACGAGGAGCCAGGCTCTGAGGACGAGCCCAGCAGTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS TCA 90 bp CTGAGACGCTGCCTCCCAAGAAGCCTCCTGGTGCGGGCTCCCCGCTaGGCTAGGCTTCCTCTGAGTAAGTTGCCCTCTGGCCCCGTGATC +
Preference number: 5 (lower is better)
Translates to: LRRCLPRSLLVRAPR*ARLPLSKLPSGPVI
Trigger: GATCACGGGGCCAGAGGGCAACTTACTCAGAGGAAGCCTAGCTCAGCGGGGAGCCCGCACCAGGAGGCTTCTTGGGAGGCAGCGTCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482433.1
CDS GCA 90 bp AGCTCCTGCTGCCGCTGGCTCTTCTCTAGCTCCACAATGCTGATCTaGAGGAGGAGAGATGGTGTCAGGCCCGCCCCACCGGGGGACCAC +
Preference number: 5 (lower is better)
Translates to: SSCCRWLFSSSTMLI*RRRDGVRPAPPGDH
Trigger: GTGGTCCCCCGGTGGGGCGGGCCTGACACCATCTCTCCTCCTGCAGATCAGCATTGTGGAGCTAGAGAAGAGCCAGCGGCAGCAGGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482433.1
CDS GCA 90 bp GGGAGTCTCGCTCTGTGGCCCAGGCAGTGGCCGATCTCAGTTCACTaGAAGCCCCGCCTCCCGGGTTCACATCATTCTCCTGCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: GSLALWPRQWPISVH*KPRLPGSHHSPASA
Trigger: GGCTGAGGCAGGAGAATGATGTGAACCCGGGAGGCGGGGCTTGCAGTGAACTGAGATCGGCCACTGCCTGGGCCACAGAGCGAGACTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482433.1
CDS CCA 90 bp TGGAGAGCTCCGGGCTCATGCTGCTCAAGTGAGGCAGCGAGAACTTaGTGCAGTCCAGCTCCAGGTGCAGCCGGCTGGCGTCAGGCTCCA +
Preference number: 5 (lower is better)
Translates to: WRAPGSCCSSEAART*CSPAPGAAGWRQAP
Trigger: TGGAGCCTGACGCCAGCCGGCTGCACCTGGAGCTGGACTGCACCAAGTTCTCGCTGCCTCACTTGAGCAGCATGAGCCCGGAGCTCTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398665.8
ENST00000482433.1
ENST00000608122.1
CDS CCA 90 bp AGACACCTCCAACTGTGCCGCCTGCCACCCCGGAAAAGCTGCCCATaGCGTGCGAGTTGGTCAGTCTGGTGGCAGCGGACGACACGTGCA +
Preference number: 5 (lower is better)
Translates to: RHLQLCRLPPRKSCP*RASWSVWWQRTTRA
Trigger: TGCACGTGTCGTCCGCTGCCACCAGACTGACCAACTCGCACGCCATGGGCAGCTTTTCCGGGGTGGCAGGCGGCACAGTTGGAGGTGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446286.1
CDS-3UTR CAA 90 bp AGGCAGGGGCGCCGGCAGCTCTGTCTGGGCTGCTGGGAGCTGCAACTGAGGGGTATGGCACGGTTGTACTaGTCGCAGAGCCTCTGCATG +
Preference number: 5 (lower is better)
Translates to: RQGRRQLCLGCWELQLRGMARLY*SQSLCM
Trigger: CATGCAGAGGCTCTGCGACAAGTACAACCGTGCCAT...ACCCCTCAGTTGCAGCTCCCAGCAGCCCAGACAGAGCTGCCGGCGCCCCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CAA 90 bp GTCCTCACAGCACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCATGGTCTCCGCATACTaGGCCGGGATGTCTGCTTTC +
Preference number: 5 (lower is better)
Translates to: VLTAPSRSTWPAASPRRPMVSAY*AGMSAF
Trigger: GAAAGCAGACATCCCGGCCAAGTATGCGGAGACCAT...GGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGTGCTGTGAGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CAA 90 bp ACAGGCCTGCCCCGCATCGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAAATATGCTGACCGGGAGCTaGTTGGGCTGCACGGTGCTG +
Preference number: 5 (lower is better)
Translates to: TGLPRIAGHAASHGQPRNMLTGS*LGCTVL
Trigger: CAGCACCGTGCAGCCCAACAAGCTCCCGGTCAGCAT...ATTTCTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGATGCGGGGCAGGCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CAA 90 bp GCCCCGCATCGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAAATACAAAAGTGGGCTGTCCGCCGACTaGGCCAGGCCGATGTCGGAG +
Preference number: 5 (lower is better)
Translates to: APHRRACCEPWTAEKYKSGLSAD*ARPMSE
Trigger: CTCCGACATCGGCCTGGCCAAGTCGGCGGACAGCCC...ACTTTTGTATTTCTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGATGCGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CAA 90 bp AGTGTGACTCTCTCCTGTACAGAAACACCAAGGGACCCACGACAGGCCTGCCCCCCGAAGGTGCAGCCGTaGGCAGGGTTGGTGCCCGGG +
Preference number: 5 (lower is better)
Translates to: SVTLSCTETPRDPRQACPPKVQP*AGLVPG
Trigger: CCCGGGCACCAACCCTGCCAACGGCTGCACCTTCGG...GGGGCAGGCCTGTCGTGGGTCCCTTGGTGTTTCTGTACAGGAGAGAGTCACACT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CAA 90 bp TGTCTGGGCTGCTGGGAGCTGCAACTGAGGGGTCTAGGGTCGGGGCTGACGCTGTTGCTCAGGAAAGGGTaGGCGTCCGAGCCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: CLGCWELQLRGLGSGLTLLLRKG*ASEPSL
Trigger: CAAGGAGGGCTCGGACGCCAACCCTTTCCTGAGCAA...CAGCGTCAGCCCCGACCCTAGACCCCTCAGTTGCAGCTCCCAGCAGCCCAGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CAA 90 bp CAAACTGGACCAGTCCCAGCCTCCTGCGGCGCGTGCCGCCGATTCACAGTGGAGGAACGGGGTTCGGCGTaGTCAGCGTCTAGTCAGCAC +
Preference number: 5 (lower is better)
Translates to: QTGPVPASCGACRRFTVEERGSA*SASSQH
Trigger: GTGCTGACTAGACGCTGACAACGCCGAACCCCGTTC...CTCCACTGTGAATCGGCGGCACGCGCCGCAGGAGGCTGGGACTGGTCCAGTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CAA 90 bp GTGCTTCCCGACGTCCGTCAGCCGCCCGTGAGAGCCCGCCTCCGGGGACAGCCTGTTTGGTGCAGTCATTaGAAAAGGCAGCAGAGGTCC +
Preference number: 5 (lower is better)
Translates to: VLPDVRQPPVRARLRGQPVWCSH*KRQQRS
Trigger: GGACCTCTGCTGCCTTTTCAAATGACTGCACCAAAC...AGGCTGTCCCCGGAGGCGGGCTCTCACGGGCGGCTGACGGACGTCGGGAAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586024.1
CDS TCA 90 bp GCACCAGGTCCATCAACAGTGAAACCACGCTGGGGACACGTAAGGTaGGCAGGCGGGCACAGTGTCGACGGGATGGGGCTCTGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: APGPSTVKPRWGHVR*AGGHSVDGMGLCSS
Trigger: GGAGCTGCAGAGCCCCATCCCGTCGACACTGTGCCCGCCTGCTCACCTTACGTGTCCCCAGCGTGGTTTCACTGTTGATGGACCTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586024.1
CDS GCA 90 bp AGGTGCAGGGACAGGGCGTCGTCAGGCGGCACACAGGACTTGAGCTaGAGGAGCTCCTGCTGCCGCTGGCTCTTCTCTAGCTCCACAATG +
Preference number: 5 (lower is better)
Translates to: RCRDRASSGGTQDLS*RSSCCRWLFSSSTM
Trigger: CATTGTGGAGCTAGAGAAGAGCCAGCGGCAGCAGGAGCTCCTGCAGCTCAAGTCCTGTGTGCCGCCTGACGACGCCCTGTCCCTGCACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398665.8
ENST00000482433.1
ENST00000608122.1
CDS GCA 90 bp GAACCAGAAACCATGCCGCTACCAGCACGGAGGCCCACGGTCGTGTaGCATTGGGCACTGCTGTGTGTGGAGCCGATCCTGAGTCAGGGG +
Preference number: 5 (lower is better)
Translates to: EPETMPLPARRPTVV*HWALLCVEPILSQG
Trigger: CCCCTGACTCAGGATCGGCTCCACACACAGCAGTGCCCAATGGCACACGACCGTGGGCCTCCGTGCTGGTAGCGGCATGGTTTCTGGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482433.1
CDS GCA 90 bp CTCAGTTCACTGCAAGCCCCGCCTCCCGGGTTCACATCATTCTCCTaGCTCAGCCTCCCAGGCACCCGCCACCACGCCCGGCTAATCTTT +
Preference number: 5 (lower is better)
Translates to: LSSLQAPPPGFTSFS*LSLPGTRHHARLIF
Trigger: AAAGATTAGCCGGGCGTGGTGGCGGGTGCCTGGGAGGCTGAGGCAGGAGAATGATGTGAACCCGGGAGGCGGGGCTTGCAGTGAACTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482433.1
CDS GCA 90 bp GACGTCCGTCAGCCGCCCGTGAGAGCCCGCCTCCGGGGACAGCCTTaGAGCAACGGTTTGGTGCAGTCATTTGAAAAGGCAGCAGAGGTC +
Preference number: 5 (lower is better)
Translates to: DVRQPPVRARLRGQP*SNGLVQSFEKAAEV
Trigger: GACCTCTGCTGCCTTTTCAAATGACTGCACCAAACCGTTGCTGCAAGGCTGTCCCCGGAGGCGGGCTCTCACGGGCGGCTGACGGACGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586024.1
CDS CCA 90 bp AGTTACCTCCAACTGTGCCGCCTGCCACCCCGGAAAAGCTGCCCATaGCGTGCGAGTTGGTCAGTCTGGTGGCAGCGGACGACACGTGCA +
Preference number: 5 (lower is better)
Translates to: SYLQLCRLPPRKSCP*RASWSVWWQRTTRA
Trigger: TGCACGTGTCGTCCGCTGCCACCAGACTGACCAACTCGCACGCCATGGGCAGCTTTTCCGGGGTGGCAGGCGGCACAGTTGGAGGTAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS CCA 90 bp GAGGCCGAGATGGCTGCAGCTGAGCCCGATCCGCATCCCAGCTCGTaGGATGCAGGAAAGGGTGTCAGTAATGAGGCGTGGCGGTTTGGG +
Preference number: 5 (lower is better)
Translates to: EAEMAAAEPDPHPSS*DAGKGVSNEAWRFG
Trigger: CCCAAACCGCCACGCCTCATTACTGACACCCTTTCCTGCATCCCACGAGCTGGGATGCGGATCGGGCTCAGCTGCAGCCATCTCGGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482433.1
CDS CCA 90 bp AAGCAGGAGGTGTCAGTGTCGGGAGACCCAGGTATGAGGCCGAGATaGCTGCAGCTGAGCCCGATCCGCATCCCAGCTCGTGGGATGCAG +
Preference number: 5 (lower is better)
Translates to: KQEVSVSGDPGMRPR*LQLSPIRIPARGMQ
Trigger: CTGCATCCCACGAGCTGGGATGCGGATCGGGCTCAGCTGCAGCCATCTCGGCCTCATACCTGGGTCTCCCGACACTGACACCTCCTGCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482433.1
CDS-3UTR CAA 90 bp ACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGCACTGTCGATGGCACGGTaGTACTTGTCGCAGAGCCTC +
Preference number: 5 (lower is better)
Translates to: TIAQHMASCVTAQAPSHALSMAR*YLSQSL
Trigger: GAGGCTCTGCGACAAGTACAACCGTGCCATCGACAG...TGCATGTGAAGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CAA 90 bp GCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGCAAGGGCGCAGGCATCCAGTGCAGTTaGGTTCTTCTTGGGCTTCCG +
Preference number: 5 (lower is better)
Translates to: AAHGQLRHRAGPFTCKGAGIQCS*VLLGLP
Trigger: CGGAAGCCCAAGAAGAACCAAACTGCACTGGATGCC...TGCGCCCTTGCATGTGAAGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CAA 90 bp CCGGCGGGCACCATGCCGCGGGCGCGAGTTGGTCCACACCGTCCTTGCATAGGTAAGGTGGACTTCCACTaGCTGCTATTGACTGGCTCG +
Preference number: 5 (lower is better)
Translates to: PAGTMPRARVGPHRPCIGKVDFH*LLLTGS
Trigger: CGAGCCAGTCAATAGCAGCAAGTGGAAGTCCACCTT...ACCTATGCAAGGACGGTGTGGACCAACTCGCGCCCGCGGCATGGTGCCCGCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CAA 90 bp ACAGGCCTGCCCCGCATCGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAAATTTGCTCAGGAAAGGGTaGGCGTCCGAGCCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: TGLPRIAGHAASHGQPRNLLRKG*ASEPSL
Trigger: CAAGGAGGGCTCGGACGCCAACCCTTTCCTGAGCAA...ATTTCTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGATGCGGGGCAGGCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CAA 90 bp TCTCCTGTACAGAAACACCAAGGGACCCACGACAGGCCTGCCCCGCATCGCAGGCCGTCCAGCTGCCTCTaGCTCAGGAAAGGGTTGGCG +
Preference number: 5 (lower is better)
Translates to: SPVQKHQGTHDRPAPHRRPSSCL*LRKGLA
Trigger: CGCCAACCCTTTCCTGAGCAAGAGGCAGCTGGACGG...CCTGCGATGCGGGGCAGGCCTGTCGTGGGTCCCTTGGTGTTTCTGTACAGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CAA 90 bp GAAGTCTTAAATAAGTCACTGTGCGTGCCTCATGGGCCGAGGAGGGGGTATCCTTCGCGGTCCCGGGCCTaGGCGGCCTTGCCGCTCAGC +
Preference number: 5 (lower is better)
Translates to: EVLNKSLCVPHGPRRGYPSRSRA*AALPLS
Trigger: GCTGAGCGGCAAGGCCGCCAAGGCCCGGGACCGCGA...AGGATACCCCCTCCTCGGCCCATGAGGCACGCACAGTGACTTATTTAAGACTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CAA 90 bp GATGTGACGTGTGTCCATCCTGCCCTTGGGAACCAGAACACAGGGCTGGCAGCTTGCCGCGGGCGCGAGTaGGTCCACACCGTCCTTGCA +
Preference number: 5 (lower is better)
Translates to: DVTCVHPALGNQNTGLAACRGRE*VHTVLA
Trigger: TGCAAGGACGGTGTGGACCAACTCGCGCCCGCGGCA...AGCTGCCAGCCCTGTGTTCTGGTTCCCAAGGGCAGGATGGACACACGTCACATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS GCA 90 bp CCGGCGGGCACCATGCCGCGGGCGCGAGTTGGTCCACACCGTCCTTaGATAGGTCTCGCGGTTGAGGTAGAAATCCTAGTTACCTCCAAC +
Preference number: 5 (lower is better)
Translates to: PAGTMPRARVGPHRP*IGLAVEVEILVTSN
Trigger: GTTGGAGGTAACTAGGATTTCTACCTCAACCGCGAGACCTATGCAAGGACGGTGTGGACCAACTCGCGCCCGCGGCATGGTGCCCGCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS GCA 90 bp AGCAGAGACTGCTCAGGCGGCACCTTCTCAAGGAACCAGAAACCATaGCGCTACCAGCACGGAGGCCCACGGTCGTGTGCCATTGGGCAC +
Preference number: 5 (lower is better)
Translates to: SRDCSGGTFSRNQKP*RYQHGGPRSCAIGH
Trigger: GTGCCCAATGGCACACGACCGTGGGCCTCCGTGCTGGTAGCGGCATGGTTTCTGGTTCCTTGAGAAGGTGCCGCCTGAGCAGTCTCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482433.1
CDS CCA 90 bp GGTTCTTCTTGGGCTTCCGCTCGGGGTTCGCAGTGTTCATCTTCTTaGGGCGCCCGCGCTTGCGGCCAGCCATCTTCCTCCCCTTCTTGT +
Preference number: 5 (lower is better)
Translates to: GSSWASARGSQCSSS*GARACGQPSSSPSC
Trigger: ACAAGAAGGGGAGGAAGATGGCTGGCCGCAAGCGCGGGCGCCCCAAGAAGATGAACACTGCGAACCCCGAGCGGAAGCCCAAGAAGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS CCA 90 bp GGCTCAGCACACCGCAGAGCTCATAGCCAGCAGCCTGGCCGTTCATaGAGAGCTCCGGGCTCATGCTGCTCAAGTGAGGCAGCGAGAACT +
Preference number: 5 (lower is better)
Translates to: GSAHRRAHSQQPGRS*RAPGSCCSSEAART
Trigger: AGTTCTCGCTGCCTCACTTGAGCAGCATGAGCCCGGAGCTCTCCATGAACGGCCAGGCTGCTGGCTATGAGCTCTGCGGTGTGCTGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398665.8
ENST00000482433.1
ENST00000608122.1
CDS-3UTR CAA 90 bp GTCCTCACAGCACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCTTGTTTAGCTTCTTCTaGCGGGCTTTGGAGGGAGAC +
Preference number: 5 (lower is better)
Translates to: VLTAPSRSTWPAASPRRPLFSFF*RALEGD
Trigger: GTCTCCCTCCAAAGCCCGCAAGAAGAAGCTAAACAA...GGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGCGCGATGGTGCTGTGAGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CAA 90 bp GGACCAGTCCCAGCCTCCTGCGGCGCGTGCCGCCGATTCACAGTGGAGCTCCCGTGCAGGTACTGGATCTaGAAGGACTCTAGAAGCTTC +
Preference number: 5 (lower is better)
Translates to: GPVPASCGACRRFTVELPCRYWI*KDSRSF
Trigger: GAAGCTTCTAGAGTCCTTCAAGATCCAGTACCTGCA...CGGGAGCTCCACTGTGAATCGGCGGCACGCGCCGCAGGAGGCTGGGACTGGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CAA 90 bp GCTCGGGAGCACGTGAGTGGTGCTTCCCGACGTCCGTCAGCCGCCCGTGAGAGCGATCTCCTTCTGCGCTaGAATCAGGTCGTTGTAGGT +
Preference number: 5 (lower is better)
Translates to: AREHVSGASRRPSAARESDLLLR*NQVVVG
Trigger: ACCTACAACGACCTGATTCAAGCGCAGAAGGAGATC...GCTCTCACGGGCGGCTGACGGACGTCGGGAAGCACCACTCACGTGCTCCCGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586024.1
CDS-3UTR CAA 90 bp GTGGCGAATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTCGCCTCAGCACAATCTaGGCCGGGGACAGCCTAGTG +
Preference number: 5 (lower is better)
Translates to: VANPLAGPPCRHVSLYRARLSTI*AGDSLV
Trigger: CACTAGGCTGTCCCCGGCCAAGATTGTGCTGAGGCG...AGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATTCGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CAA 90 bp GATGTGACGTGTGTCCATCCTGCCCTTGGGAACCAGAACACAGGGCTGGCAGCTGTCAGGGGGCTGTGCTaGCTGGAGGGCGACTGCTTG +
Preference number: 5 (lower is better)
Translates to: DVTCVHPALGNQNTGLAAVRGLC*LEGDCL
Trigger: CAAGCAGTCGCCCTCCAGCAAGCACAGCCCCCTGAC...AGCTGCCAGCCCTGTGTTCTGGTTCCCAAGGGCAGGATGGACACACGTCACATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CAA 90 bp GACCAGGGACTCGGCCGTCTCTGCCATCAACCCTGTGGCGTATCCGGCCCGTGGATCTCCAGGGGCTGGTaGATGTTACTGACCATGGAG +
Preference number: 5 (lower is better)
Translates to: DQGLGRLCHQPCGVSGPWISRGW*MLLTME
Trigger: CTCCATGGTCAGTAACATCAACCAGCCCCTGGAGAT...CCACGGGCCGGATACGCCACAGGGTTGATGGCAGAGACGGCCGAGTCCCTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CAA 90 bp GCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGCAAGGGCGCAATCTCCAGGGGCTGGTaGATGTTACTGACCATGGAG +
Preference number: 5 (lower is better)
Translates to: AAHGQLRHRAGPFTCKGAISRGW*MLLTME
Trigger: CTCCATGGTCAGTAACATCAACCAGCCCCTGGAGAT...TGCGCCCTTGCATGTGAAGGGGCCTGCGCGGTGACGCAGCTGGCCATGTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CAA 90 bp GATGTGACGTGTGTCCATCCTGCCCTTGGGAACCAGAACACAGGGCTGGCAGCTCCCATGGCGTGCGAGTaGGTCAGTCTGGTGGCAGCG +
Preference number: 5 (lower is better)
Translates to: DVTCVHPALGNQNTGLAAPMACE*VSLVAA
Trigger: CGCTGCCACCAGACTGACCAACTCGCACGCCATGGG...AGCTGCCAGCCCTGTGTTCTGGTTCCCAAGGGCAGGATGGACACACGTCACATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CAA 90 bp CCCACAGCAGCTGGGAGAACCAGCACAGGCTCCAAGGGATGGGTGCCAGGCGTGCAGAACTCAGCTATGTaGGAGGGTGGGGGTCTGAGA +
Preference number: 5 (lower is better)
Translates to: PTAAGRTSTGSKGWVPGVQNSAM*EGGGLR
Trigger: TCTCAGACCCCCACCCTCCAACATAGCTGAGTTCTG...CACGCCTGGCACCCATCCCTTGGAGCCTGTGCTGGTTCTCCCAGCTGCTGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS TCA 90 bp AATTCGAGCACTGCTGGGCTCGTCCTCAGAGCCTGGCTCCTCGTCTaGGGTGAGTGGGGAGTAGTGTGCCCCATTGGTCTGGCTCAGAGG +
Preference number: 5 (lower is better)
Translates to: NSSTAGLVLRAWLLV*GEWGVVCPIGLAQR
Trigger: CCTCTGAGCCAGACCAATGGGGCACACTACTCCCCACTCACCTCAGACGAGGAGCCAGGCTCTGAGGACGAGCCCAGCAGTGCTCGAATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS TCA 90 bp GTGAGTACAGGAGCCCCCGAGAGCACTGGGGCCGACCTCACGGGCTaGATTAATACACCCAAGCAGGAGGTGTCAGTGTCGGGAGACCCA +
Preference number: 5 (lower is better)
Translates to: VSTGAPESTGADLTG*INTPKQEVSVSGDP
Trigger: TGGGTCTCCCGACACTGACACCTCCTGCTTGGGTGTATTAATTCAGCCCGTGAGGTCGGCCCCAGTGCTCTCGGGGGCTCCTGTACTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482433.1
CDS GCA 90 bp TCCAGGCAGTGCCTCTGCTTCTCCGAGATCTGGCTCTTCAGGGCCTaGTTCTCCTTCAACAGCTTCTCCAGCGACAGCGTGGCCCAGTCC +
Preference number: 5 (lower is better)
Translates to: SRQCLCFSEIWLFRA*FSFNSFSSDSVAQS
Trigger: GGACTGGGCCACGCTGTCGCTGGAGAAGCTGTTGAAGGAGAAGCAGGCCCTGAAGAGCCAGATCTCGGAGAAGCAGAGGCACTGCCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398665.8
ENST00000586024.1
ENST00000608122.1
CDS GCA 90 bp CATAGCCAGCAGCCTGGCCGTTCATGGAGAGCTCCGGGCTCATGCTaGTCAAGTGAGGCAGCGAGAACTTGGTGCAGTCCAGCTCCAGGT +
Preference number: 5 (lower is better)
Translates to: HSQQPGRSWRAPGSC*SSEAARTWCSPAPG
Trigger: ACCTGGAGCTGGACTGCACCAAGTTCTCGCTGCCTCACTTGAGCAGCATGAGCCCGGAGCTCTCCATGAACGGCCAGGCTGCTGGCTATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398665.8
ENST00000482433.1
ENST00000608122.1
CDS GCA 90 bp GCTCATAGCCAGCAGCCTGGCCGTTCATGGAGAGCTCCGGGCTCATaGTGCTCAAGTGAGGCAGCGAGAACTTGGTGCAGTCCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: AHSQQPGRSWRAPGS*CSSEAARTWCSPAP
Trigger: TGGAGCTGGACTGCACCAAGTTCTCGCTGCCTCACTTGAGCAGCATGAGCCCGGAGCTCTCCATGAACGGCCAGGCTGCTGGCTATGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398665.8
ENST00000482433.1
ENST00000608122.1
CDS GCA 90 bp AATCCTAGTTACCTCCAACTGTGCCGCCTGCCACCCCGGAAAAGCTaGCCATGGCGTGCGAGTTGGTCAGTCTGGTGGCAGCGGACGACA +
Preference number: 5 (lower is better)
Translates to: NPSYLQLCRLPPRKS*PWRASWSVWWQRTT
Trigger: TGTCGTCCGCTGCCACCAGACTGACCAACTCGCACGCCATGGGCAGCTTTTCCGGGGTGGCAGGCGGCACAGTTGGAGGTAACTAGGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS CCA 90 bp CCGGGATGTCTGCTTTCTCGACGCCATAGTGATGTTTGCAGTTGGTaGCAGCAGCAACCTGGAGCACGACCTGGCCCACACCGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: PGCLLSRRHSDVCSW*QQQPGARPGPHRSP
Trigger: TGGGGAGCGGTGTGGGCCAGGTCGTGCTCCAGGTTGCTGCTGCCACCAACTGCAAACATCACTATGGCGTCGAGAAAGCAGACATCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000452696.5
CDS CCA 90 bp TCAGGCGGCACACAGGACTTGAGCTGCAGGAGCTCCTGCTGCCGCTaGCTCTTCTCTAGCTCCACAATGCTGATCTGCAGCTCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: SGGTQDLSCRSSCCR*LFSSSTMLICSSRQ
Trigger: CTGCCTGGAGCTGCAGATCAGCATTGTGGAGCTAGAGAAGAGCCAGCGGCAGCAGGAGCTCCTGCAGCTCAAGTCCTGTGTGCCGCCTGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000608122.1
CDS-3UTR CAA 90 bp ATTAGTGTGACTCTCTCCTGTACAGAAACACCAAGGGACCCACGACAGGCCTGCAGCGCCTCCGCCATCTaGGGCCGGCGTGAAGCGAGC +
Preference number: 5 (lower is better)
Translates to: ISVTLSCTETPRDPRQACSASAI*GRREAS
Trigger: GCTCGCTTCACGCCGGCCCAAGATGGCGGAGGCGCT...GCAGGCCTGTCGTGGGTCCCTTGGTGTTTCTGTACAGGAGAGAGTCACACTAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CAA 90 bp AATACAGTTCACCCGGAAGACACGGCAGAGCCTCCCACGTTACAAAGGCTGACAGCCACGGAGCCGAGGTaGGCCTGCAGGGACATGGGG +
Preference number: 5 (lower is better)
Translates to: NTVHPEDTAEPPTLQRLTATEPR*ACRDMG
Trigger: CCCCATGTCCCTGCAGGCCAACCTCGGCTCCGTGGC...TGTCAGCCTTTGTAACGTGGGAGGCTCTGCCGTGTCTTCCGGGTGAACTGTATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS TCA 90 bp CCTCTGAGTAAGTTGCCCTCTGGCCCCGTGATCTCAGAGACACCATaGGGAAAGCCCATGGCTGCGTGGCCTCCCTCCCTCCTGTTCTCA +
Preference number: 5 (lower is better)
Translates to: PLSKLPSGPVISETP*GKPMAAWPPSLLFS
Trigger: TGAGAACAGGAGGGAGGGAGGCCACGCAGCCATGGGCTTTCCTCATGGTGTCTCTGAGATCACGGGGCCAGAGGGCAACTTACTCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482433.1
CDS TCA 90 bp CCGCCTCCGGGGACAGCCTTGCAGCAACGGTTTGGTGCAGTCATTTaGAAAGGCAGCAGAGGTCCAGCGACAGGGCACCAGGTCCATCAA +
Preference number: 5 (lower is better)
Translates to: PPPGTALQQRFGAVI*KGSRGPATGHQVHQ
Trigger: TTGATGGACCTGGTGCCCTGTCGCTGGACCTCTGCTGCCTTTTCAAATGACTGCACCAAACCGTTGCTGCAAGGCTGTCCCCGGAGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586024.1
CDS GCA 90 bp GCTTGCGGCCAGCCATCTTCCTCCCCTTCTTGTTTAGCTTCTTCTTaGGGGCTTTGGAGGGAGACGGCTTCTTCACGGTGGCTGCTCCCG +
Preference number: 5 (lower is better)
Translates to: ACGQPSSSPSCLASS*GLWRETASSRWLLP
Trigger: CGGGAGCAGCCACCGTGAAGAAGCCGTCTCCCTCCAAAGCCCGCAAGAAGAAGCTAAACAAGAAGGGGAGGAAGATGGCTGGCCGCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS CCA 90 bp ACACGGTCTGAGCGTGCAGGGCATCCAGTGCAGTTTGGTTCTTCTTaGGCTTCCGCTCGGGGTTCGCAGTGTTCATCTTCTTGGGGCGCC +
Preference number: 5 (lower is better)
Translates to: TRSERAGHPVQFGSS*ASARGSQCSSSWGA
Trigger: GGCGCCCCAAGAAGATGAACACTGCGAACCCCGAGCGGAAGCCCAAGAAGAACCAAACTGCACTGGATGCCCTGCACGCTCAGACCGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS TCA 90 bp GGTGATGGTGAACACAATCCTCCTCTTGGCTTCACTCTCAGGATCTaGGAAGCCGGAATCGGAGGGCAGGTCTCCCTTGCTGGCCTCGGG +
Preference number: 5 (lower is better)
Translates to: GDGEHNPPLGFTLRI*EAGIGGQVSLAGLG
Trigger: CCCGAGGCCAGCAAGGGAGACCTGCCCTCCGATTCCGGCTTCTCAGATCCTGAGAGTGAAGCCAAGAGGAGGATTGTGTTCACCATCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000482433.1
CDS GCA 90 bp CTCTGGCCCCGTGATCTCAGAGACACCATGAGGAAAGCCCATGGCTaGGTGGCCTCCCTCCCTCCTGTTCTCAGAAGACAACTCAGCTTG +
Preference number: 5 (lower is better)
Translates to: LWPRDLRDTMRKAHG*VASLPPVLRRQLSL
Trigger: CAAGCTGAGTTGTCTTCTGAGAACAGGAGGGAGGGAGGCCACGCAGCCATGGGCTTTCCTCATGGTGTCTCTGAGATCACGGGGCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482433.1
CDS CCA 90 bp TCAGGCGGCACACAGGACTTGAGCTGCAGGAGCTCCTGCTGCCGCTaGCTCTTCTCTAGCTCCACAATGCTGATCTGCAGGAGGAGAGAT +
Preference number: 5 (lower is better)
Translates to: SGGTQDLSCRSSCCR*LFSSSTMLICRRRD
Trigger: ATCTCTCCTCCTGCAGATCAGCATTGTGGAGCTAGAGAAGAGCCAGCGGCAGCAGGAGCTCCTGCAGCTCAAGTCCTGTGTGCCGCCTGA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482433.1
CDS CCA 90 bp GCTGCGTGGCCTCCCTCCCTCCTGTTCTCAGAAGACAACTCAGCTTaGATACTCCAAGCTATGGCCGCCTTGAAGGCCGCAGCCATGCTT +
Preference number: 5 (lower is better)
Translates to: AAWPPSLLFSEDNSA*ILQAMAALKAAAML
Trigger: AAGCATGGCTGCGGCCTTCAAGGCGGCCATAGCTTGGAGTATCCAAGCTGAGTTGTCTTCTGAGAACAGGAGGGAGGGAGGCCACGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482433.1
CDS-3UTR CAA 90 bp GTCGAAGGAGGTCTCCCCGTACACCTCGGGGGAGAAGGGCTCGTAGTTGTTGAGATGGCACGGTTGTACTaGTCGCAGAGCCTCTGCATG +
Preference number: 5 (lower is better)
Translates to: VEGGLPVHLGGEGLVVVEMARLY*SQSLCM
Trigger: CATGCAGAGGCTCTGCGACAAGTACAACCGTGCCAT...CTCAACAACTACGAGCCCTTCTCCCCCGAGGTGTACGGGGAGACCTCCTTCGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478937.3
CDS-3UTR CAA 90 bp ATCGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAAATACAAAAGTAAATGCAGAGGGCAGGTCTCCCTaGCTGGCCTCGGGCAACGGG +
Preference number: 5 (lower is better)
Translates to: IAGHAASHGQPRNTKVNAEGRSP*LASGNG
Trigger: CCCGTTGCCCGAGGCCAGCAAGGGAGACCTGCCCTC...TGCATTTACTTTTGTATTTCTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CAA 90 bp ACAGGCCCAGGGCTCAGAACAGGAGGGTGTCCGCAGGCAGCCACCACACTAGTTGCAGAGATGAAGAGGTaGTGGCCATTCTTGAGGTCG +
Preference number: 5 (lower is better)
Translates to: TGPGLRTGGCPQAATTLVAEMKR*WPFLRS
Trigger: CGACCTCAAGAATGGCCACAACCTCTTCATCTCTGC...AACTAGTGTGGTGGCTGCCTGCGGACACCCTCCTGTTCTGAGCCCTGGGCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CAA 90 bp GCTCTACTCCAGGCAGACCCACAGGGCCCGGCTGTGGTAAAGAGGTCGGCGACCCCTTGCAGCAACGGTTaGGTGCAGTCATTTGAAAAG +
Preference number: 5 (lower is better)
Translates to: ALLQADPQGPAVVKRSATPCSNG*VQSFEK
Trigger: CTTTTCAAATGACTGCACCAAACCGTTGCTGCAAGG...GGTCGCCGACCTCTTTACCACAGCCGGGCCCTGTGGGTCTGCCTGGAGTAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586024.1
CDS GCA 90 bp CATACTTGGCCGGGATGTCTGCTTTCTCGACGCCATAGTGATGTTTaGAGTTGGTGGCAGCAGCAACCTGGAGCACGACCTGGCCCACAC +
Preference number: 5 (lower is better)
Translates to: HTWPGCLLSRRHSDV*SWWQQQPGARPGPH
Trigger: GTGTGGGCCAGGTCGTGCTCCAGGTTGCTGCTGCCACCAACTGCAAACATCACTATGGCGTCGAGAAAGCAGACATCCCGGCCAAGTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000452696.5
CDS GCA 90 bp CCTGAACTCGCGGTCCATGGTCTCCGCATACTTGGCCGGGATGTCTaGTTTCTCGACGCCATAGTGATGTTTGCAGTTGGTGGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: PELAVHGLRILGRDV*FLDAIVMFAVGGSS
Trigger: GCTGCTGCCACCAACTGCAAACATCACTATGGCGTCGAGAAAGCAGACATCCCGGCCAAGTATGCGGAGACCATGGACCGCGAGTTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000452696.5
CDS-3UTR CAA 90 bp GCGGACCGTGACAATGCGCGCAATCCAAATACAGTTCACCCGGAAGACACGGCAGCAGTTTGGTTCTTCTaGGGCTTCCGCTCGGGGTTC +
Preference number: 5 (lower is better)
Translates to: ADRDNARNPNTVHPEDTAAVWFF*GFRSGF
Trigger: GAACCCCGAGCGGAAGCCCAAGAAGAACCAAACTGC...TGCCGTGTCTTCCGGGTGAACTGTATTTGGATTGCGCGCATTGTCACGGTCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CAA 90 bp CGCCGATTCACAGTGGAGCTCCCGTCCGTCCTTGCCTCTGCCGTCCAGGGGTGGGTTTTCGGGGGAGATTaGCTTTCTAAGGAGATTGTT +
Preference number: 5 (lower is better)
Translates to: RRFTVELPSVLASAVQGWVFGGD*LSKEIV
Trigger: AACAATCTCCTTAGAAAGCAAATCTCCCCCGAAAAC...CCACCCCTGGACGGCAGAGGCAAGGACGGACGGGAGCTCCACTGTGAATCGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CAA 90 bp AATACAGTTCACCCGGAAGACACGGCAGAGCCTCCCACGTTACAAAGGCTGACACCGTCCAGCTGCCTCTaGCTCAGGAAAGGGTTGGCG +
Preference number: 5 (lower is better)
Translates to: NTVHPEDTAEPPTLQRLTPSSCL*LRKGLA
Trigger: CGCCAACCCTTTCCTGAGCAAGAGGCAGCTGGACGG...TGTCAGCCTTTGTAACGTGGGAGGCTCTGCCGTGTCTTCCGGGTGAACTGTATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CAA 90 bp ATCGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAAATACAAAAGTAAATGCAAGCTCCCGTCCGTCCTaGCCTCTGCCGTCCAGGGGT +
Preference number: 5 (lower is better)
Translates to: IAGHAASHGQPRNTKVNASSRPS*PLPSRG
Trigger: ACCCCTGGACGGCAGAGGCAAGGACGGACGGGAGCT...TGCATTTACTTTTGTATTTCTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS-3UTR CAA 90 bp GCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTCTCATATATAGATATGCGACGGGCCTGCCTTaGGTACGGGAGCAGCGCGTC +
Preference number: 5 (lower is better)
Translates to: AGPPCRHVSLYRALIYRYATGLP*VREQRV
Trigger: GACGCGCTGCTCCCGTACCAAAGGCAGGCCCGTCGC...ATATCTATATATGAGAGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS TCA 90 bp AGGCGCTTCTGGAGTTGGCTGTTTGCCACCCAGTTGAAAATCTCCTaGAACTGTCACTGCCTCTCGCAGAGCAGACCTCACCCCAAGGGC +
Preference number: 5 (lower is better)
Translates to: RRFWSWLFATQLKIS*NCHCLSQSRPHPKG
Trigger: GCCCTTGGGGTGAGGTCTGCTCTGCGAGAGGCAGTGACAGTTTCAGGAGATTTTCAACTGGGTGGCAAACAGCCAACTCCAGAAGCGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482433.1
CDS TCA 90 bp TCTCAGAAGACAACTCAGCTTGGATACTCCAAGCTATGGCCGCCTTaGAGGCCGCAGCCATGCTTCCCAGCCCACGATGAGTGGTGCACT +
Preference number: 5 (lower is better)
Translates to: SQKTTQLGYSKLWPP*RPQPCFPAHDEWCT
Trigger: AGTGCACCACTCATCGTGGGCTGGGAAGCATGGCTGCGGCCTTCAAGGCGGCCATAGCTTGGAGTATCCAAGCTGAGTTGTCTTCTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482433.1
CDS GCA 90 bp GCATCCTCTCTGGCTCTCTGCAGAAACTGGGCTAACAGCAGAGACTaGTCAGGCGGCACCTTCTCAAGGAACCAGAAACCATGCCGCTAC +
Preference number: 5 (lower is better)
Translates to: ASSLALCRNWANSRD*SGGTFSRNQKPCRY
Trigger: GTAGCGGCATGGTTTCTGGTTCCTTGAGAAGGTGCCGCCTGAGCAGTCTCTGCTGTTAGCCCAGTTTCTGCAGAGAGCCAGAGAGGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482433.1
CDS CCA 90 bp CAGCCATCTTCCTCCCCTTCTTGTTTAGCTTCTTCTTGCGGGCTTTaGAGGGAGACGGCTTCTTCACGGTGGCTGCTCCCGCCTTCTCTT +
Preference number: 5 (lower is better)
Translates to: QPSSSPSCLASSCGL*RETASSRWLLPPSL
Trigger: AAGAGAAGGCGGGAGCAGCCACCGTGAAGAAGCCGTCTCCCTCCAAAGCCCGCAAGAAGAAGCTAAACAAGAAGGGGAGGAAGATGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CAA 90 bp ACTTGTCGCAGAGCCTCTGCATGCTCTCGAAGCTGGGCACTGCATGTGCCGAGGTTCTCCATAGCGAGCTaGAGATCCGGGATTTCTTCA +
Preference number: 5 (lower is better)
Translates to: TCRRASACSRSWALHVPRFSIAS*RSGISS
Trigger: TGAAGAAATCCCGGATCTCAAGCTCGCTATGGAGAA...CCTCGGCACATGCAGTGCCCAGCTTCGAGAGCATGCAGAGGCTCTGCGACAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478937.3
CDS-3UTR CAA 90 bp TGTCACCTAGAGGGAGGCAGAAGTAATACAGTGTTTAAAGAATGTGTCTTGTTCGGCAGGGCTCGGCGCTaGGGGGACACGCCTGCGCTC +
Preference number: 5 (lower is better)
Translates to: CHLEGGRSNTVFKECVLFGRARR*GDTPAL
Trigger: GAGCGCAGGCGTGTCCCCCAAGCGCCGAGCCCTGCC...GAACAAGACACATTCTTTAAACACTGTATTACTTCTGCCTCCCTCTAGGTGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CAA 90 bp CATCGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAAATACAAAAGTAAATGCACCATGGAGTTGAGGTaGAGGGGAGACCCCGAAGGC +
Preference number: 5 (lower is better)
Translates to: HRRACCEPWTAEKYKSKCTMELR*RGDPEG
Trigger: GCCTTCGGGGTCTCCCCTCAACCTCAACTCCATGGT...GCATTTACTTTTGTATTTCTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CAA 90 bp CCACTCATTAGTGTGACTCTCTCCTGTACAGAAACACCAAGGGACCCACGACAGAGGTTGTGGCCATTCTaGAGGTCGACCTCGCGGTCC +
Preference number: 5 (lower is better)
Translates to: PLISVTLSCTETPRDPRQRLWPF*RSTSRS
Trigger: GGACCGCGAGGTCGACCTCAAGAATGGCCACAACCT...CTGTCGTGGGTCCCTTGGTGTTTCTGTACAGGAGAGAGTCACACTAATGAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS CCA 90 bp CGGCTTCCACAACAGACAGGCCTGCAGTGTCAACAAAAGCCAAAGTaGCATCCTCTCTGGCTCTCTGCAGAAACTGGGCTAACAGCAGAG +
Preference number: 5 (lower is better)
Translates to: RLPQQTGLQCQQKPK*HPLWLSAETGLTAE
Trigger: CTCTGCTGTTAGCCCAGTTTCTGCAGAGAGCCAGAGAGGATGCCACTTTGGCTTTTGTTGACACTGCAGGCCTGTCTGTTGTGGAAGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482433.1
CDS-3UTR CAA 90 bp GAAGTCTTAAATAAGTCACTGTGCGTGCCTCATGGGCCGAGGAGGGGGTATCCTTTACTGACCATGGAGTaGAGGTTGAGGGGAGACCCC +
Preference number: 5 (lower is better)
Translates to: EVLNKSLCVPHGPRRGYPLLTME*RLRGDP
Trigger: GGGGTCTCCCCTCAACCTCAACTCCATGGTCAGTAA...AGGATACCCCCTCCTCGGCCCATGAGGCACGCACAGTGACTTATTTAAGACTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CAA 90 bp GGTCCACACCGTCCTTGCATAGGTCTCGCGGTTGAGGTAGAAATCCTAGTTACCTTACTGACCATGGAGTaGAGGTTGAGGGGAGACCCC +
Preference number: 5 (lower is better)
Translates to: GPHRPCIGLAVEVEILVTLLTME*RLRGDP
Trigger: GGGGTCTCCCCTCAACCTCAACTCCATGGTCAGTAA...GGTAACTAGGATTTCTACCTCAACCGCGAGACCTATGCAAGGACGGTGTGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457590.2
CDS-3UTR CAA 90 bp CTTCCACAGCTGGTGGATGCTGTCGATGGCACGGTTGTACTTGTCGCAGAGCCTTCGTCGTCGGTCATCTaGATCTCATCAATCATCTGG +
Preference number: 5 (lower is better)
Translates to: LPQLVDAVDGTVVLVAEPSSSVI*ISSIIW
Trigger: CCAGATGATTGATGAGATCAAGATGACCGACGACGA...AGGCTCTGCGACAAGTACAACCGTGCCATCGACAGCATCCACCAGCTGTGGAAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478937.3
CDS-3UTR CAA 90 bp AATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTCTCATAGATCTCCTTCTGCGCTaGAATCAGGTCGTTGTAGGT +
Preference number: 5 (lower is better)
Translates to: NPLAGPPCRHVSLYRALIDLLLR*NQVVVG
Trigger: ACCTACAACGACCTGATTCAAGCGCAGAAGGAGATC...TATGAGAGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CAA 90 bp GGGCATGCTGCGAGCCATGGACAGCCGAGAAATACAAAAGTAAATGCACTTGTTTTCTTCTTGCGGGCTTaGGAGGGAGACGGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: GHAASHGQPRNTKVNALVFFLRA*EGDGFF
Trigger: GAAGAAGCCGTCTCCCTCCAAAGCCCGCAAGAAGAA...AACAAGTGCATTTACTTTTGTATTTCTCGGCTGTCCATGGCTCGCAGCATGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CAA 90 bp CCACTCATTAGTGTGACTCTCTCCTGTACAGAAACACCAAGGGACCCACGACAGTTCTCCATAGCGAGCTaGAGATCCGGGATTTCTTCA +
Preference number: 5 (lower is better)
Translates to: PLISVTLSCTETPRDPRQFSIAS*RSGISS
Trigger: TGAAGAAATCCCGGATCTCAAGCTCGCTATGGAGAA...CTGTCGTGGGTCCCTTGGTGTTTCTGTACAGGAGAGAGTCACACTAATGAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CAA 90 bp GGGCATGCTGCGAGCCATGGACAGCCGAGAAATACAAAAGTAAATGCACTTGTTAATATAACACTCGTGTaGGCGATTCGCTCCCTCCAC +
Preference number: 5 (lower is better)
Translates to: GHAASHGQPRNTKVNALVNITLV*AIRSLH
Trigger: GTGGAGGGAGCGAATCGCCAACACGAGTGTTATATT...AACAAGTGCATTTACTTTTGTATTTCTCGGCTGTCCATGGCTCGCAGCATGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CAA 90 bp GCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTCTCATATATAGATATTCGTCGTCGGTCATCTaGATCTCATCAATCATCTGG +
Preference number: 5 (lower is better)
Translates to: AGPPCRHVSLYRALIYRYSSSVI*ISSIIW
Trigger: CCAGATGATTGATGAGATCAAGATGACCGACGACGA...ATATCTATATATGAGAGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS-3UTR CAA 90 bp ATCGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAAATACAAAAGTAAATGCAGTTTTCGGGGGAGATTaGCTTTCTAAGGAGATTGTT +
Preference number: 5 (lower is better)
Translates to: IAGHAASHGQPRNTKVNAVFGGD*LSKEIV
Trigger: AACAATCTCCTTAGAAAGCAAATCTCCCCCGAAAAC...TGCATTTACTTTTGTATTTCTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS TCA 90 bp CACAAATATAACACTCGTGTTGGCGATTCGCTCCCTCCACTCTTCTaGGAGGAAATCGCCTCTCTCCAATGTGTATTCTGCATGCTTTTT +
Preference number: 5 (lower is better)
Translates to: HKYNTRVGDSLPPLF*EEIASLQCVFCMLF
Trigger: AAAAAGCATGCAGAATACACATTGGAGAGAGGCGATTTCCTCTCAGAAGAGTGGAGGGAGCGAATCGCCAACACGAGTGTTATATTTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS TCA 90 bp ATTCTGCCACCTTCCTTCATGTTTGCAAACCGCTCCTTCAGCTGGTaGTCCACCTCAGGACCAAAGGCAAAATTATTCACAAATATAACA +
Preference number: 5 (lower is better)
Translates to: ILPPSFMFANRSFSW*STSGPKAKLFTNIT
Trigger: TGTTATATTTGTGAATAATTTTGCCTTTGGTCCTGAGGTGGATCACCAGCTGAAGGAGCGGTTTGCAAACATGAAGGAAGGTGGCAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS CCA 72 bp GCATGCCGAGGGACACCCACACCGCGGACGGCCCCGTaGCGCTGGCCTGTGGGATCCCGGGCGCGGCCTGGG +
Preference number: 6 (lower is better)
Translates to: ACRGTPTPRTAP*RWPVGSRARPG
Trigger: CCCAGGCCGCGCCCGGGATCCCACAGGCCAGCGCCACGGGGCCGTCCGCGGTGTGGGTGTCCCTCGGCATGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457590.2
CDS CCA 72 bp CGCTTCCGCCGGCCGCGCCTGCGACTGTCCTGCCCGTaGCTCGGCACACAGTCCCCACGGGCGCTGGCGGTC +
Preference number: 6 (lower is better)
Translates to: RFRRPRLRLSCP*LGTQSPRALAV
Trigger: GACCGCCAGCGCCCGTGGGGACTGTGTGCCGAGCCACGGGCAGGACAGTCGCAGGCGCGGCCGGCGGAAGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000482433.1
CDS CAA 90 bp AGGTCCGCGGCCAGGCCCCCGCCGAAGGTGCAGCCGTTGGCAGGGTaGGTGCCCGGGCTGAGTCCGTCAGCCCCCGACAGGGAGCCGGGA +
Preference number: 6 (lower is better)
Translates to: RSAARPPPKVQPLAG*VPGLSPSAPDREPG
Trigger: TCCCGGCTCCCTGTCGGGGGCTGACGGACTCAGCCCGGGCACCAACCCTGCCAACGGCTGCACCTTCGGCGGGGGCCTGGCCGCGGACCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS CAA 90 bp TCGCGGTCCCGGGCCTTGGCGGCCTTGCCGCTCAGCAGTGGGGTCTaGTCCGTGGGCCCGCACAGCGGTAGGCCGCCCTCCCCTGCCTCC +
Preference number: 6 (lower is better)
Translates to: SRSRALAALPLSSGV*SVGPHSGRPPSPAS
Trigger: GGAGGCAGGGGAGGGCGGCCTACCGCTGTGCGGGCCCACGGACAAGACCCCACTGCTGAGCGGCAAGGCCGCCAAGGCCCGGGACCGCGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS GCA 72 bp GCGGTAGGCCGCCCTCCCCTGCCTCCTTGCCGCGGCTaGCCTCGCCCTTCAGCCCAGCCAGGCCGTCCAGCT +
Preference number: 6 (lower is better)
Translates to: AVGRPPLPPCRG*PRPSAQPGRPA
Trigger: AGCTGGACGGCCTGGCTGGGCTGAAGGGCGAGGGCAGCCGCGGCAAGGAGGCAGGGGAGGGCGGCCTACCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS CCA 72 bp GCAGCGCGGGCGGGGTGGGCGCCACCAGCAGCGGGTTaGGGGAGTGCCGCTGCACGCTCGGAGGTAGCTGGT +
Preference number: 6 (lower is better)
Translates to: AARAGWAPPAAG*GSAAARSEVAG
Trigger: ACCAGCTACCTCCGAGCGTGCAGCGGCACTCCCCCAACCCGCTGCTGGTGGCGCCCACCCCGCCCGCGCTGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS CAA 72 bp TGCAGCGCGGGCGGGGTGGGCGCCACCAGCAGCGGGTaGGGGGAGTGCCGCTGCACGCTCGGAGGTAGCTGG +
Preference number: 6 (lower is better)
Translates to: CSAGGVGATSSG*GECRCTLGGSW
Trigger: CCAGCTACCTCCGAGCGTGCAGCGGCACTCCCCCAACCCGCTGCTGGTGGCGCCCACCCCGCCCGCGCTGCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS GCA 72 bp GATGCTCGCTTCCGCCGGCCGCGCCTGCGACTGTCCTaGCCGTGGCTCGGCACACAGTCCCCACGGGCGCTG +
Preference number: 6 (lower is better)
Translates to: DARFRRPRLRLS*PWLGTQSPRAL
Trigger: CAGCGCCCGTGGGGACTGTGTGCCGAGCCACGGGCAGGACAGTCGCAGGCGCGGCCGGCGGAAGCGAGCATC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000482433.1
CDS GCA 72 bp GCGTCCCCGCAGATGCTCGCTTCCGCCGGCCGCGCCTaGGACTGTCCTGCCCGTGGCTCGGCACACAGTCCC +
Preference number: 6 (lower is better)
Translates to: ASPQMLASAGRA*DCPARGSAHSP
Trigger: GGGACTGTGTGCCGAGCCACGGGCAGGACAGTCGCAGGCGCGGCCGGCGGAAGCGAGCATCTGCGGGGACGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000482433.1
CDS CCA 72 bp GGCAGGTCTCCCTTGCTGGCCTCGGGCAACGGGCCCTaGGCGGCCCCACCAAGCCGGGGACTGGAGGAGAGC +
Preference number: 6 (lower is better)
Translates to: GRSPLLASGNGP*AAPPSRGLEES
Trigger: GCTCTCCTCCAGTCCCCGGCTTGGTGGGGCCGCCCAGGGCCCGTTGCCCGAGGCCAGCAAGGGAGACCTGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000482433.1
CDS CCA 72 bp AGCCGGCCACGGAGCCGAGGTTGGCCTGCAGGGACATaGGGCCGAGCGCGAACTGCGGTCCCGGCGGGAAGG +
Preference number: 6 (lower is better)
Translates to: SRPRSRGWPAGT*GRARTAVPAGR
Trigger: CCTTCCCGCCGGGACCGCAGTTCGCGCTCGGCCCCATGTCCCTGCAGGCCAACCTCGGCTCCGTGGCCGGCT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398665.8
ENST00000446286.1
ENST00000457590.2
CDS CAA 72 bp CCCTCTGGGCCCTTAGTGGGCGTGGCCGCGTTGCTCTaGCTCTCGCGCTGCTGGCGGCGCCGGGCTGCCTCC +
Preference number: 6 (lower is better)
Translates to: PSGPLVGVAALL*LSRCWRRRAAS
Trigger: GGAGGCAGCCCGGCGCCGCCAGCAGCGCGAGAGCAAGAGCAACGCGGCCACGCCCACTAAGGGCCCAGAGGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS CAA 72 bp CCAGAGTCCATGGGGGCGTCGGCGGGGCCGGCCACCTaGCCCTCTGGGCCCTTAGTGGGCGTGGCCGCGTTG +
Preference number: 6 (lower is better)
Translates to: PESMGASAGPAT*PSGPLVGVAAL
Trigger: CAACGCGGCCACGCCCACTAAGGGCCCAGAGGGCAAGGTGGCCGGCCCCGCCGACGCCCCCATGGACTCTGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS CAA 72 bp GCCAGGCCCCCGCCGAAGGTGCAGCCGTTGGCAGGGTaGGTGCCCGGGCTGAGTCCGTCAGCCCCCGACAGG +
Preference number: 6 (lower is better)
Translates to: ARPPPKVQPLAG*VPGLSPSAPDR
Trigger: CCTGTCGGGGGCTGACGGACTCAGCCCGGGCACCAACCCTGCCAACGGCTGCACCTTCGGCGGGGGCCTGGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS CAA 72 bp CGGGCCTTGGCGGCCTTGCCGCTCAGCAGTGGGGTCTaGTCCGTGGGCCCGCACAGCGGTAGGCCGCCCTCC +
Preference number: 6 (lower is better)
Translates to: RALAALPLSSGV*SVGPHSGRPPS
Trigger: GGAGGGCGGCCTACCGCTGTGCGGGCCCACGGACAAGACCCCACTGCTGAGCGGCAAGGCCGCCAAGGCCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS GCA 72 bp TCCAGCTCGCGGCCCAGGGCGCCCTTCCCACGCAGGTaGAGGGACAGGGCGTCGTCAGGCGGCACACAGGAC +
Preference number: 6 (lower is better)
Translates to: SSSRPRAPFPRR*RDRASSGGTQD
Trigger: GTCCTGTGTGCCGCCTGACGACGCCCTGTCCCTGCACCTGCGTGGGAAGGGCGCCCTGGGCCGCGAGCTGGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398665.8
ENST00000482433.1
ENST00000608122.1
CDS GCA 72 bp GGACACGCCTGCGCTCAAGCTGGGCGTCCCCGCAGATaGTCGCTTCCGCCGGCCGCGCCTGCGACTGTCCTG +
Preference number: 6 (lower is better)
Translates to: GHACAQAGRPRR*SLPPAAPATVL
Trigger: CAGGACAGTCGCAGGCGCGGCCGGCGGAAGCGAGCATCTGCGGGGACGCCCAGCTTGAGCGCAGGCGTGTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000482433.1
CDS GCA 72 bp CTGCAGCGGGCTCGGGCCCAGTGTGGCGCTGCCACATaGAGCCCCGCGGCCGACACGGGCTCCAAACGGATG +
Preference number: 6 (lower is better)
Translates to: LQRARAQCGAAT*SPAADTGSKRM
Trigger: CATCCGTTTGGAGCCCGTGTCGGCCGCGGGGCTGCATGTGGCAGCGCCACACTGGGCCCGAGCCCGCTGCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446286.1
ENST00000457590.2
CDS CCA 72 bp CATGGGGGCGTCGGCGGGGCCGGCCACCTTGCCCTCTaGGCCCTTAGTGGGCGTGGCCGCGTTGCTCTTGCT +
Preference number: 6 (lower is better)
Translates to: HGGVGGAGHLAL*ALSGRGRVALA
Trigger: AGCAAGAGCAACGCGGCCACGCCCACTAAGGGCCCAGAGGGCAAGGTGGCCGGCCCCGCCGACGCCCCCATG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS CCA 72 bp CCTGCCCGTGGCTCGGCACACAGTCCCCACGGGCGCTaGCGGTCAGGGGGCTGTGCTTGCTGGAGGGCGACT +
Preference number: 6 (lower is better)
Translates to: PARGSAHSPHGR*RSGGCACWRAT
Trigger: AGTCGCCCTCCAGCAAGCACAGCCCCCTGACCGCCAGCGCCCGTGGGGACTGTGTGCCGAGCCACGGGCAGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000482433.1
CDS CCA 72 bp TGGCGGCCTTGCCGCTCAGCAGTGGGGTCTTGTCCGTaGGCCCGCACAGCGGTAGGCCGCCCTCCCCTGCCT +
Preference number: 6 (lower is better)
Translates to: WRPCRSAVGSCP*ARTAVGRPPLP
Trigger: AGGCAGGGGAGGGCGGCCTACCGCTGTGCGGGCCCACGGACAAGACCCCACTGCTGAGCGGCAAGGCCGCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS CAA 90 bp CTGAACAGCGACTGCAGCACGGAGGAGCCGGCCACGGAGCCGAGGTaGGCCTGCAGGGACATGGGGCCGAGCGCGAACTGCGGTCCCGGC +
Preference number: 6 (lower is better)
Translates to: LNSDCSTEEPATEPR*ACRDMGPSANCGPG
Trigger: GCCGGGACCGCAGTTCGCGCTCGGCCCCATGTCCCTGCAGGCCAACCTCGGCTCCGTGGCCGGCTCCTCCGTGCTGCAGTCGCTGTTCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398665.8
ENST00000446286.1
ENST00000457590.2
CDS GCA 72 bp AGTCCCCACGGGCGCTGGCGGTCAGGGGGCTGTGCTTaGTGGAGGGCGACTGCTTGGCACTGCCCGCACCAG +
Preference number: 6 (lower is better)
Translates to: SPHGRWRSGGCA*WRATAWHCPHQ
Trigger: CTGGTGCGGGCAGTGCCAAGCAGTCGCCCTCCAGCAAGCACAGCCCCCTGACCGCCAGCGCCCGTGGGGACT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000482433.1
CDS GCA 72 bp GACGGACGGCAGGGCTCGGCGCTTGGGGGACACGCCTaGGCTCAAGCTGGGCGTCCCCGCAGATGCTCGCTT +
Preference number: 6 (lower is better)
Translates to: DGRQGSALGGHA*AQAGRPRRCSL
Trigger: AAGCGAGCATCTGCGGGGACGCCCAGCTTGAGCGCAGGCGTGTCCCCCAAGCGCCGAGCCCTGCCGTCCGTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000482433.1
CDS GCA 72 bp AGGCCTGCGGCGGCCGGCACAGAGCTGAACAGCGACTaGAGCACGGAGGAGCCGGCCACGGAGCCGAGGTTG +
Preference number: 6 (lower is better)
Translates to: RPAAAGTELNSD*STEEPATEPRL
Trigger: CAACCTCGGCTCCGTGGCCGGCTCCTCCGTGCTGCAGTCGCTGTTCAGCTCTGTGCCGGCCGCCGCAGGCCT
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398665.8
ENST00000446286.1
ENST00000457590.2
CDS CCA 72 bp GGGCGGAGCTGGCCTGCAGCGGGCTGTCCGCCGACTTaGCCAGGCCGATGTCGGAGATGGGCGAGAAGGTGG +
Preference number: 6 (lower is better)
Translates to: GRSWPAAGCPPT*PGRCRRWARRW
Trigger: CCACCTTCTCGCCCATCTCCGACATCGGCCTGGCCAAGTCGGCGGACAGCCCGCTGCAGGCCAGCTCCGCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS CCA 72 bp ACTGCAGCACGGAGGAGCCGGCCACGGAGCCGAGGTTaGCCTGCAGGGACATGGGGCCGAGCGCGAACTGCG +
Preference number: 6 (lower is better)
Translates to: TAARRSRPRSRG*PAGTWGRARTA
Trigger: CGCAGTTCGCGCTCGGCCCCATGTCCCTGCAGGCCAACCTCGGCTCCGTGGCCGGCTCCTCCGTGCTGCAGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398665.8
ENST00000446286.1
ENST00000457590.2
CDS CAA 72 bp ACCTTGCCCTCTGGGCCCTTAGTGGGCGTGGCCGCGTaGCTCTTGCTCTCGCGCTGCTGGCGGCGCCGGGCT +
Preference number: 6 (lower is better)
Translates to: TLPSGPLVGVAA*LLLSRCWRRRA
Trigger: AGCCCGGCGCCGCCAGCAGCGCGAGAGCAAGAGCAACGCGGCCACGCCCACTAAGGGCCCAGAGGGCAAGGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS CAA 72 bp GTGAAAAGGCCAGCGACGGACGGCAGGGCTCGGCGCTaGGGGGACACGCCTGCGCTCAAGCTGGGCGTCCCC +
Preference number: 6 (lower is better)
Translates to: VKRPATDGRARR*GDTPALKLGVP
Trigger: GGGGACGCCCAGCTTGAGCGCAGGCGTGTCCCCCAAGCGCCGAGCCCTGCCGTCCGTCGCTGGCCTTTTCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000482433.1
CDS CAA 72 bp TTGAGGTCGACCTCGCGGTCCCGGGCCTTGGCGGCCTaGCCGCTCAGCAGTGGGGTCTTGTCCGTGGGCCCG +
Preference number: 6 (lower is better)
Translates to: LRSTSRSRALAA*PLSSGVLSVGP
Trigger: CGGGCCCACGGACAAGACCCCACTGCTGAGCGGCAAGGCCGCCAAGGCCCGGGACCGCGAGGTCGACCTCAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS CAA 72 bp GACTGCAGCACGGAGGAGCCGGCCACGGAGCCGAGGTaGGCCTGCAGGGACATGGGGCCGAGCGCGAACTGC +
Preference number: 6 (lower is better)
Translates to: DCSTEEPATEPR*ACRDMGPSANC
Trigger: GCAGTTCGCGCTCGGCCCCATGTCCCTGCAGGCCAACCTCGGCTCCGTGGCCGGCTCCTCCGTGCTGCAGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398665.8
ENST00000446286.1
ENST00000457590.2
CDS CAA 90 bp TCCTCAGCACCAGAGTCCATGGGGGCGTCGGCGGGGCCGGCCACCTaGCCCTCTGGGCCCTTAGTGGGCGTGGCCGCGTTGCTCTTGCTC +
Preference number: 6 (lower is better)
Translates to: SSAPESMGASAGPAT*PSGPLVGVAALLLL
Trigger: GAGCAAGAGCAACGCGGCCACGCCCACTAAGGGCCCAGAGGGCAAGGTGGCCGGCCCCGCCGACGCCCCCATGGACTCTGGTGCTGAGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS CAA 90 bp TGTAAACTCAGGTCCGCGGCCAGGCCCCCGCCGAAGGTGCAGCCGTaGGCAGGGTTGGTGCCCGGGCTGAGTCCGTCAGCCCCCGACAGG +
Preference number: 6 (lower is better)
Translates to: CKLRSAARPPPKVQP*AGLVPGLSPSAPDR
Trigger: CCTGTCGGGGGCTGACGGACTCAGCCCGGGCACCAACCCTGCCAACGGCTGCACCTTCGGCGGGGGCCTGGCCGCGGACCTGAGTTTACA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS TCA 72 bp GCCCCCGACAGGGAGCCGGGAAAGCCTTTCCTGGGGTaGGCGGCCAGCTTGGCATCGGCAGAGGGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: APDREPGKPFLG*AASLASAEGSS
Trigger: GGAGGAGCCCTCTGCCGATGCCAAGCTGGCCGCTCACCCCAGGAAAGGCTTTCCCGGCTCCCTGTCGGGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS TCA 72 bp CGAAGGTGCAGCCGTTGGCAGGGTTGGTGCCCGGGCTaGGTCCGTCAGCCCCCGACAGGGAGCCGGGAAAGC +
Preference number: 6 (lower is better)
Translates to: RRCSRWQGWCPG*VRQPPTGSRES
Trigger: GCTTTCCCGGCTCCCTGTCGGGGGCTGACGGACTCAGCCCGGGCACCAACCCTGCCAACGGCTGCACCTTCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS GCA 72 bp AGCTGCAAGCTCTGGCCGCGGAGCGCGCGGTTGTCCTaGTCCAGCTGCTCCGACTGCTCCCGCAGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: SCKLWPRSARLS*SSCSDCSRSCW
Trigger: CCAGCAGCTGCGGGAGCAGTCGGAGCAGCTGGAGCAGGACAACCGCGCGCTCCGCGGCCAGAGCTTGCAGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398665.8
ENST00000586024.1
ENST00000591498.1
CDS GCA 72 bp GCTCAGCTCTCGAATGCAGCTCACTGGCAGCCGGCCTaGCGGGCACCGTGTGGTCCTGGCTCAGGTGCCGCC +
Preference number: 6 (lower is better)
Translates to: AQLSNAAHWQPA*RAPCGPGSGAA
Trigger: GGCGGCACCTGAGCCAGGACCACACGGTGCCCGGCAGGCCGGCTGCCAGTGAGCTGCATTCGAGAGCTGAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000482433.1
CDS GCA 72 bp GATCTGAGAAGCCGGAATCGGAGGGCAGGTCTCCCTTaGTGGCCTCGGGCAACGGGCCCTGGGCGGCCCCAC +
Preference number: 6 (lower is better)
Translates to: DLRSRNRRAGLP*WPRATGPGRPH
Trigger: GTGGGGCCGCCCAGGGCCCGTTGCCCGAGGCCAGCAAGGGAGACCTGCCCTCCGATTCCGGCTTCTCAGATC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000482433.1
CDS GCA 72 bp CTGCAAGCCCCGCCTCCCGGGTTCACATCATTCTCCTaGCTCAGCCTCCCAGGCACCCGCCACCACGCCCGG +
Preference number: 6 (lower is better)
Translates to: LQAPPPGFTSFS*LSLPGTRHHAR
Trigger: CCGGGCGTGGTGGCGGGTGCCTGGGAGGCTGAGGCAGGAGAATGATGTGAACCCGGGAGGCGGGGCTTGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482433.1
CDS CCA 72 bp AGGCCAGACAGCTTCTCCAGGCGCGGCCGGCCGACGTaGCTAGGGGTACAGGGCACCACCTCCTGGTCCAGG +
Preference number: 6 (lower is better)
Translates to: RPDSFSRRGRPT*LGVQGTTSWSR
Trigger: CCTGGACCAGGAGGTGGTGCCCTGTACCCCTAGCCACGTCGGCCGGCCGCGCCTGGAGAAGCTGTCTGGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000482433.1
CDS CCA 72 bp TCACTGGCAGCCGGCCTGCCGGGCACCGTGTGGTCCTaGCTCAGGTGCCGCCTCAGCACAATCTTGGCCGGG +
Preference number: 6 (lower is better)
Translates to: SLAAGLPGTVWS*LRCRLSTILAG
Trigger: CCCGGCCAAGATTGTGCTGAGGCGGCACCTGAGCCAGGACCACACGGTGCCCGGCAGGCCGGCTGCCAGTGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000482433.1
CDS CCA 72 bp CTGAGAAGCCGGAATCGGAGGGCAGGTCTCCCTTGCTaGCCTCGGGCAACGGGCCCTGGGCGGCCCCACCAA +
Preference number: 6 (lower is better)
Translates to: LRSRNRRAGLPC*PRATGPGRPHQ
Trigger: TTGGTGGGGCCGCCCAGGGCCCGTTGCCCGAGGCCAGCAAGGGAGACCTGCCCTCCGATTCCGGCTTCTCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000482433.1
CDS CAA 72 bp GGATCTGAGAAGCCGGAATCGGAGGGCAGGTCTCCCTaGCTGGCCTCGGGCAACGGGCCCTGGGCGGCCCCA +
Preference number: 6 (lower is better)
Translates to: GSEKPESEGRSP*LASGNGPWAAP
Trigger: TGGGGCCGCCCAGGGCCCGTTGCCCGAGGCCAGCAAGGGAGACCTGCCCTCCGATTCCGGCTTCTCAGATCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000482433.1
CDS CAA 72 bp AGGGCGGAGCTGGCCTGCAGCGGGCTGTCCGCCGACTaGGCCAGGCCGATGTCGGAGATGGGCGAGAAGGTG +
Preference number: 6 (lower is better)
Translates to: RAELACSGLSAD*ARPMSEMGEKV
Trigger: CACCTTCTCGCCCATCTCCGACATCGGCCTGGCCAAGTCGGCGGACAGCCCGCTGCAGGCCAGCTCCGCCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS CAA 72 bp GCCAGGCCGTCCAGCTGCCTCTTGCTCAGGAAAGGGTaGGCGTCCGAGCCCTCCTTGCCGCGCTGCGAGGGG +
Preference number: 6 (lower is better)
Translates to: ARPSSCLLLRKG*ASEPSLPRCEG
Trigger: CCCCTCGCAGCGCGGCAAGGAGGGCTCGGACGCCAACCCTTTCCTGAGCAAGAGGCAGCTGGACGGCCTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS CAA 90 bp CTCGGCACACAGTCCCCACGGGCGCTGGCGGTCAGGGGGCTGTGCTaGCTGGAGGGCGACTGCTTGGCACTGCCCGCACCAGTGGTGATG +
Preference number: 6 (lower is better)
Translates to: LGTQSPRALAVRGLC*LEGDCLALPAPVVM
Trigger: CATCACCACTGGTGCGGGCAGTGCCAAGCAGTCGCCCTCCAGCAAGCACAGCCCCCTGACCGCCAGCGCCCGTGGGGACTGTGTGCCGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000482433.1
CDS CAA 90 bp TCCAGCTGCCTCTTGCTCAGGAAAGGGTTGGCGTCCGAGCCCTCCTaGCCGCGCTGCGAGGGGAAGCTCAGCGGGGAGCTCAGGCCGGCC +
Preference number: 6 (lower is better)
Translates to: SSCLLLRKGLASEPS*PRCEGKLSGELRPA
Trigger: GGCCGGCCTGAGCTCCCCGCTGAGCTTCCCCTCGCAGCGCGGCAAGGAGGGCTCGGACGCCAACCCTTTCCTGAGCAAGAGGCAGCTGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS CAA 90 bp TGGCCATTCTTGAGGTCGACCTCGCGGTCCCGGGCCTTGGCGGCCTaGCCGCTCAGCAGTGGGGTCTTGTCCGTGGGCCCGCACAGCGGT +
Preference number: 6 (lower is better)
Translates to: WPFLRSTSRSRALAA*PLSSGVLSVGPHSG
Trigger: ACCGCTGTGCGGGCCCACGGACAAGACCCCACTGCTGAGCGGCAAGGCCGCCAAGGCCCGGGACCGCGAGGTCGACCTCAAGAATGGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS CAA 90 bp CCGGGAGGCACGGCCGCCGCAGAGATGAAGAGGTTGTGGCCATTCTaGAGGTCGACCTCGCGGTCCCGGGCCTTGGCGGCCTTGCCGCTC +
Preference number: 6 (lower is better)
Translates to: PGGTAAAEMKRLWPF*RSTSRSRALAALPL
Trigger: GAGCGGCAAGGCCGCCAAGGCCCGGGACCGCGAGGTCGACCTCAAGAATGGCCACAACCTCTTCATCTCTGCGGCGGCCGTGCCTCCCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS CAA 90 bp CGGCTGGGCAGCACCACGCTGGCCAGGGGAATGCTGACCGGGAGCTaGTTGGGCTGCACGGTGCTGAGCGGGATGCTGATGGGCAGGCTG +
Preference number: 6 (lower is better)
Translates to: RLGSTTLARGMLTGS*LGCTVLSGMLMGRL
Trigger: CAGCCTGCCCATCAGCATCCCGCTCAGCACCGTGCAGCCCAACAAGCTCCCGGTCAGCATTCCCCTGGCCAGCGTGGTGCTGCCCAGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000482433.1
CDS CAA 90 bp TCACTCTCAGGATCTGAGAAGCCGGAATCGGAGGGCAGGTCTCCCTaGCTGGCCTCGGGCAACGGGCCCTGGGCGGCCCCACCAAGCCGG +
Preference number: 6 (lower is better)
Translates to: SLSGSEKPESEGRSP*LASGNGPWAAPPSR
Trigger: CCGGCTTGGTGGGGCCGCCCAGGGCCCGTTGCCCGAGGCCAGCAAGGGAGACCTGCCCTCCGATTCCGGCTTCTCAGATCCTGAGAGTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000482433.1
CDS GCA 72 bp ACAGGGGCCGCGGGTCCTGAGGGCTCAGCTTCATGCTaGCAGGCACGCTGGGGCTCTGGTAGGGAAGGCCGT +
Preference number: 6 (lower is better)
Translates to: TGAAGPEGSASC*QARWGSGREGR
Trigger: ACGGCCTTCCCTACCAGAGCCCCAGCGTGCCTGGCAGCATGAAGCTGAGCCCTCAGGACCCGCGGCCCCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000482433.1
CDS GCA 72 bp CAGTCTGGTGGCAGCGGACGACACGTGCACCAGGCCTaGGGCGGCCGGCACAGAGCTGAACAGCGACTGCAG +
Preference number: 6 (lower is better)
Translates to: QSGGSGRHVHQA*GGRHRAEQRLQ
Trigger: CTGCAGTCGCTGTTCAGCTCTGTGCCGGCCGCCGCAGGCCTGGTGCACGTGTCGTCCGCTGCCACCAGACTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398665.8
ENST00000446286.1
ENST00000457590.2
CDS CCA 72 bp AGCTCCTCGCAGCGAGCCTTGAGCAGCTGCAAGCTCTaGCCGCGGAGCGCGCGGTTGTCCTGCTCCAGCTGC +
Preference number: 6 (lower is better)
Translates to: SSSQRALSSCKL*PRSARLSCSSC
Trigger: GCAGCTGGAGCAGGACAACCGCGCGCTCCGCGGCCAGAGCTTGCAGCTGCTCAAGGCTCGCTGCGAGGAGCT
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398665.8
ENST00000586024.1
ENST00000591498.1
CDS CCA 72 bp CGTCAGCCCCCGACAGGGAGCCGGGAAAGCCTTTCCTaGGGTGAGCGGCCAGCTTGGCATCGGCAGAGGGCT +
Preference number: 6 (lower is better)
Translates to: RQPPTGSRESLS*GERPAWHRQRA
Trigger: AGCCCTCTGCCGATGCCAAGCTGGCCGCTCACCCCAGGAAAGGCTTTCCCGGCTCCCTGTCGGGGGCTGACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS CCA 72 bp CCAGGCCGTCCAGCTGCCTCTTGCTCAGGAAAGGGTTaGCGTCCGAGCCCTCCTTGCCGCGCTGCGAGGGGA +
Preference number: 6 (lower is better)
Translates to: PGRPAASCSGKG*RPSPPCRAARG
Trigger: TCCCCTCGCAGCGCGGCAAGGAGGGCTCGGACGCCAACCCTTTCCTGAGCAAGAGGCAGCTGGACGGCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS CCA 72 bp CAGAAGCGCGGGCTCAGGGTTAGAGGCCAGCAGCGTTaGGGGAGGAGGCAAGGCGGCGTTAGGTGGAGGGGG +
Preference number: 6 (lower is better)
Translates to: QKRGLRVRGQQR*GRRQGGVRWRG
Trigger: CCCCCTCCACCTAACGCCGCCTTGCCTCCTCCCCCAACGCTGCTGGCCTCTAACCCTGAGCCCGCGCTTCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457590.2
CDS CAA 90 bp CTGGGCAGCACCACGCTGGCCAGGGGAATGCTGACCGGGAGCTTGTaGGGCTGCACGGTGCTGAGCGGGATGCTGATGGGCAGGCTGGTG +
Preference number: 6 (lower is better)
Translates to: LGSTTLARGMLTGSL*GCTVLSGMLMGRLV
Trigger: CACCAGCCTGCCCATCAGCATCCCGCTCAGCACCGTGCAGCCCAACAAGCTCCCGGTCAGCATTCCCCTGGCCAGCGTGGTGCTGCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000482433.1
CDS CAA 90 bp TTCTGGCTGAGGGCGGAGCTGGCCTGCAGCGGGCTGTCCGCCGACTaGGCCAGGCCGATGTCGGAGATGGGCGAGAAGGTGGACTTCCAC +
Preference number: 6 (lower is better)
Translates to: FWLRAELACSGLSAD*ARPMSEMGEKVDFH
Trigger: GTGGAAGTCCACCTTCTCGCCCATCTCCGACATCGGCCTGGCCAAGTCGGCGGACAGCCCGCTGCAGGCCAGCTCCGCCCTCAGCCAGAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS CAA 90 bp TTCAGCCCAGCCAGGCCGTCCAGCTGCCTCTTGCTCAGGAAAGGGTaGGCGTCCGAGCCCTCCTTGCCGCGCTGCGAGGGGAAGCTCAGC +
Preference number: 6 (lower is better)
Translates to: FSPARPSSCLLLRKG*ASEPSLPRCEGKLS
Trigger: GCTGAGCTTCCCCTCGCAGCGCGGCAAGGAGGGCTCGGACGCCAACCCTTTCCTGAGCAAGAGGCAGCTGGACGGCCTGGCTGGGCTGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS CAA 90 bp CTGAGGAGGCTTCCGGGAGGCACGGCCGCCGCAGAGATGAAGAGGTaGTGGCCATTCTTGAGGTCGACCTCGCGGTCCCGGGCCTTGGCG +
Preference number: 6 (lower is better)
Translates to: LRRLPGGTAAAEMKR*WPFLRSTSRSRALA
Trigger: CGCCAAGGCCCGGGACCGCGAGGTCGACCTCAAGAATGGCCACAACCTCTTCATCTCTGCGGCGGCCGTGCCTCCCGGAAGCCTCCTCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS CAA 90 bp ACTGTGCCGCCTGCCACCCCGGAAAAGCTGCCCATGGCGTGCGAGTaGGTCAGTCTGGTGGCAGCGGACGACACGTGCACCAGGCCTGCG +
Preference number: 6 (lower is better)
Translates to: TVPPATPEKLPMACE*VSLVAADDTCTRPA
Trigger: CGCAGGCCTGGTGCACGTGTCGTCCGCTGCCACCAGACTGACCAACTCGCACGCCATGGGCAGCTTTTCCGGGGTGGCAGGCGGCACAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398665.8
ENST00000446286.1
ENST00000457590.2
CDS TCA 72 bp CCCGGGGACAAAGGGCGGCCTCCCTGCTTCTGCCAATaGGGCCTCAGTGCAGGGGCGCAGCAAGGCGCTTCT +
Preference number: 6 (lower is better)
Translates to: PGDKGRPPCFCQ*GLSAGAQQGAS
Trigger: AGAAGCGCCTTGCTGCGCCCCTGCACTGAGGCCTCATTGGCAGAAGCAGGGAGGCCGCCCTTTGTCCCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482433.1
CDS TCA 72 bp CCTGCCAGAGTGTGGCTCCATGACACCCAGGGCCGCTaGGAAACCATCCAGCCGAGGGGCCCAGGCCTGCCT +
Preference number: 6 (lower is better)
Translates to: PARVWLHDTQGR*ETIQPRGPGLP
Trigger: AGGCAGGCCTGGGCCCCTCGGCTGGATGGTTTCTCAGCGGCCCTGGGTGTCATGGAGCCACACTCTGGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608122.1
CDS GCA 72 bp CGCCCTTCAGCCCAGCCAGGCCGTCCAGCTGCCTCTTaGTCAGGAAAGGGTTGGCGTCCGAGCCCTCCTTGC +
Preference number: 6 (lower is better)
Translates to: RPSAQPGRPAAS*SGKGWRPSPPC
Trigger: GCAAGGAGGGCTCGGACGCCAACCCTTTCCTGAGCAAGAGGCAGCTGGACGGCCTGGCTGGGCTGAAGGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS GCA 72 bp TGCGAGTTGGTCAGTCTGGTGGCAGCGGACGACACGTaGACCAGGCCTGCGGCGGCCGGCACAGAGCTGAAC +
Preference number: 6 (lower is better)
Translates to: CELVSLVAADDT*TRPAAAGTELN
Trigger: GTTCAGCTCTGTGCCGGCCGCCGCAGGCCTGGTGCACGTGTCGTCCGCTGCCACCAGACTGACCAACTCGCA
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398665.8
ENST00000446286.1
ENST00000457590.2
CDS GCA 72 bp GTGCCGCCTGCCACCCCGGAAAAGCTGCCCATGGCGTaGGAGTTGGTCAGTCTGGTGGCAGCGGACGACACG +
Preference number: 6 (lower is better)
Translates to: VPPATPEKLPMA*ELVSLVAADDT
Trigger: CGTGTCGTCCGCTGCCACCAGACTGACCAACTCGCACGCCATGGGCAGCTTTTCCGGGGTGGCAGGCGGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398665.8
ENST00000446286.1
ENST00000457590.2
CDS CCA 72 bp TGCAGCTCACTGGCAGCCGGCCTGCCGGGCACCGTGTaGTCCTGGCTCAGGTGCCGCCTCAGCACAATCTTG +
Preference number: 6 (lower is better)
Translates to: CSSLAAGLPGTV*SWLRCRLSTIL
Trigger: CAAGATTGTGCTGAGGCGGCACCTGAGCCAGGACCACACGGTGCCCGGCAGGCCGGCTGCCAGTGAGCTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000482433.1
CDS CAA 72 bp CTCTTGCTCAGGAAAGGGTTGGCGTCCGAGCCCTCCTaGCCGCGCTGCGAGGGGAAGCTCAGCGGGGAGCTC +
Preference number: 6 (lower is better)
Translates to: LLLRKGLASEPS*PRCEGKLSGEL
Trigger: GAGCTCCCCGCTGAGCTTCCCCTCGCAGCGCGGCAAGGAGGGCTCGGACGCCAACCCTTTCCTGAGCAAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS CAA 72 bp ACGGCCGCCGCAGAGATGAAGAGGTTGTGGCCATTCTaGAGGTCGACCTCGCGGTCCCGGGCCTTGGCGGCC +
Preference number: 6 (lower is better)
Translates to: TAAAEMKRLWPF*RSTSRSRALAA
Trigger: GGCCGCCAAGGCCCGGGACCGCGAGGTCGACCTCAAGAATGGCCACAACCTCTTCATCTCTGCGGCGGCCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS CAA 90 bp CGGGCGCTGGCGGTCAGGGGGCTGTGCTTGCTGGAGGGCGACTGCTaGGCACTGCCCGCACCAGTGGTGATGGTGAACACAATCCTCCTC +
Preference number: 6 (lower is better)
Translates to: RALAVRGLCLLEGDC*ALPAPVVMVNTILL
Trigger: GAGGAGGATTGTGTTCACCATCACCACTGGTGCGGGCAGTGCCAAGCAGTCGCCCTCCAGCAAGCACAGCCCCCTGACCGCCAGCGCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000482433.1
CDS TCA 72 bp CATGCAGCCCCGCGGCCGACACGGGCTCCAAACGGATaGGCAGAGGCGGAGGGCACCGCGTGGTTAAAGACA +
Preference number: 6 (lower is better)
Translates to: HAAPRPTRAPNG*AEAEGTAWLKT
Trigger: TGTCTTTAACCACGCGGTGCCCTCCGCCTCTGCTCATCCGTTTGGAGCCCGTGTCGGCCGCGGGGCTGCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446286.1
ENST00000457590.2
CDS GCA 72 bp TGGTCCAGGGGTGAGGCCAGGTACTGGGGCGTGTTCTaGTTCGACGAAGGCCGGCTCAGCACACCGCAGAGC +
Preference number: 6 (lower is better)
Translates to: WSRGEARYWGVF*FDEGRLSTPQS
Trigger: GCTCTGCGGTGTGCTGAGCCGGCCTTCGTCGAAGCAGAACACGCCCCAGTACCTGGCCTCACCCCTGGACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398665.8
ENST00000482433.1
ENST00000608122.1
CDS GCA 72 bp TCTTGCTCAGGAAAGGGTTGGCGTCCGAGCCCTCCTTaGCGCGCTGCGAGGGGAAGCTCAGCGGGGAGCTCA +
Preference number: 6 (lower is better)
Translates to: SCSGKGWRPSPP*RAARGSSAGSS
Trigger: TGAGCTCCCCGCTGAGCTTCCCCTCGCAGCGCGGCAAGGAGGGCTCGGACGCCAACCCTTTCCTGAGCAAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS GCA 72 bp AGGGCGGCCTCCCTGCTTCTGCCAATGAGGCCTCAGTaGAGGGGCGCAGCAAGGCGCTTCTGGAGTTGGCTG +
Preference number: 6 (lower is better)
Translates to: RAASLLLPMRPQ*RGAARRFWSWL
Trigger: CAGCCAACTCCAGAAGCGCCTTGCTGCGCCCCTGCACTGAGGCCTCATTGGCAGAAGCAGGGAGGCCGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482433.1
CDS CCA 72 bp TGGGCTTCCGCTCGGGGTTCGCAGTGTTCATCTTCTTaGGGCGCCCGCGCTTGCGGCCAGCCATCTTCCTCC +
Preference number: 6 (lower is better)
Translates to: WASARGSQCSSS*GARACGQPSSS
Trigger: GGAGGAAGATGGCTGGCCGCAAGCGCGGGCGCCCCAAGAAGATGAACACTGCGAACCCCGAGCGGAAGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS CCA 72 bp TGCGGGACCCCACGGTGGCAAAAAGGCTCCCAGAGCTaGAGGACTCATCCAAGGTGGCCGGCTCGGCTCCAG +
Preference number: 6 (lower is better)
Translates to: CGTPRWQKGSQS*RTHPRWPARLQ
Trigger: CTGGAGCCGAGCCGGCCACCTTGGATGAGTCCTCCAGCTCTGGGAGCCTTTTTGCCACCGTGGGGTCCCGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000482433.1
CDS CCA 72 bp GGGCGAGAAGGTGGACTTCCACTTGCTGCTATTGACTaGCTCGCCGGCGGGCGCGGGCTTCCTTCCCGCCAA +
Preference number: 6 (lower is better)
Translates to: GREGGLPLAAID*LAGGRGLPSRQ
Trigger: TTGGCGGGAAGGAAGCCCGCGCCCGCCGGCGAGCCAGTCAATAGCAGCAAGTGGAAGTCCACCTTCTCGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS CCA 72 bp AAAAGCTGCCCATGGCGTGCGAGTTGGTCAGTCTGGTaGCAGCGGACGACACGTGCACCAGGCCTGCGGCGG +
Preference number: 6 (lower is better)
Translates to: KSCPWRASWSVW*QRTTRAPGLRR
Trigger: CCGCCGCAGGCCTGGTGCACGTGTCGTCCGCTGCCACCAGACTGACCAACTCGCACGCCATGGGCAGCTTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398665.8
ENST00000446286.1
ENST00000457590.2
CDS CCA 72 bp CGGAAAAGCTGCCCATGGCGTGCGAGTTGGTCAGTCTaGTGGCAGCGGACGACACGTGCACCAGGCCTGCGG +
Preference number: 6 (lower is better)
Translates to: RKSCPWRASWSV*WQRTTRAPGLR
Trigger: CCGCAGGCCTGGTGCACGTGTCGTCCGCTGCCACCAGACTGACCAACTCGCACGCCATGGGCAGCTTTTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398665.8
ENST00000446286.1
ENST00000457590.2
CDS CCA 72 bp CAACTGTGCCGCCTGCCACCCCGGAAAAGCTGCCCATaGCGTGCGAGTTGGTCAGTCTGGTGGCAGCGGACG +
Preference number: 6 (lower is better)
Translates to: QLCRLPPRKSCP*RASWSVWWQRT
Trigger: CGTCCGCTGCCACCAGACTGACCAACTCGCACGCCATGGGCAGCTTTTCCGGGGTGGCAGGCGGCACAGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398665.8
ENST00000446286.1
ENST00000457590.2
CDS CAA 72 bp ACCACGCTGGCCAGGGGAATGCTGACCGGGAGCTTGTaGGGCTGCACGGTGCTGAGCGGGATGCTGATGGGC +
Preference number: 6 (lower is better)
Translates to: TTLARGMLTGSL*GCTVLSGMLMG
Trigger: GCCCATCAGCATCCCGCTCAGCACCGTGCAGCCCAACAAGCTCCCGGTCAGCATTCCCCTGGCCAGCGTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000482433.1
CDS CAA 72 bp CCGATGTCGGAGATGGGCGAGAAGGTGGACTTCCACTaGCTGCTATTGACTGGCTCGCCGGCGGGCGCGGGC +
Preference number: 6 (lower is better)
Translates to: PMSEMGEKVDFH*LLLTGSPAGAG
Trigger: GCCCGCGCCCGCCGGCGAGCCAGTCAATAGCAGCAAGTGGAAGTCCACCTTCTCGCCCATCTCCGACATCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS CAA 72 bp TCGCCCTTCAGCCCAGCCAGGCCGTCCAGCTGCCTCTaGCTCAGGAAAGGGTTGGCGTCCGAGCCCTCCTTG +
Preference number: 6 (lower is better)
Translates to: SPFSPARPSSCL*LRKGLASEPSL
Trigger: CAAGGAGGGCTCGGACGCCAACCCTTTCCTGAGCAAGAGGCAGCTGGACGGCCTGGCTGGGCTGAAGGGCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS CAA 72 bp CTTCCGGGAGGCACGGCCGCCGCAGAGATGAAGAGGTaGTGGCCATTCTTGAGGTCGACCTCGCGGTCCCGG +
Preference number: 6 (lower is better)
Translates to: LPGGTAAAEMKR*WPFLRSTSRSR
Trigger: CCGGGACCGCGAGGTCGACCTCAAGAATGGCCACAACCTCTTCATCTCTGCGGCGGCCGTGCCTCCCGGAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS CAA 72 bp CCTGCCACCCCGGAAAAGCTGCCCATGGCGTGCGAGTaGGTCAGTCTGGTGGCAGCGGACGACACGTGCACC +
Preference number: 6 (lower is better)
Translates to: PATPEKLPMACE*VSLVAADDTCT
Trigger: GGTGCACGTGTCGTCCGCTGCCACCAGACTGACCAACTCGCACGCCATGGGCAGCTTTTCCGGGGTGGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398665.8
ENST00000446286.1
ENST00000457590.2
CDS CAA 90 bp CCGATGTCGGAGATGGGCGAGAAGGTGGACTTCCACTTGCTGCTATaGACTGGCTCGCCGGCGGGCGCGGGCTTCCTTCCCGCCAAGCCA +
Preference number: 6 (lower is better)
Translates to: PMSEMGEKVDFHLLL*TGSPAGAGFLPAKP
Trigger: TGGCTTGGCGGGAAGGAAGCCCGCGCCCGCCGGCGAGCCAGTCAATAGCAGCAAGTGGAAGTCCACCTTCTCGCCCATCTCCGACATCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS CAA 90 bp TTGGCCAGGCCGATGTCGGAGATGGGCGAGAAGGTGGACTTCCACTaGCTGCTATTGACTGGCTCGCCGGCGGGCGCGGGCTTCCTTCCC +
Preference number: 6 (lower is better)
Translates to: LARPMSEMGEKVDFH*LLLTGSPAGAGFLP
Trigger: GGGAAGGAAGCCCGCGCCCGCCGGCGAGCCAGTCAATAGCAGCAAGTGGAAGTCCACCTTCTCGCCCATCTCCGACATCGGCCTGGCCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS TCA 72 bp AGATGGGCGAGAAGGTGGACTTCCACTTGCTGCTATTaGCTGGCTCGCCGGCGGGCGCGGGCTTCCTTCCCG +
Preference number: 6 (lower is better)
Translates to: RWARRWTSTCCY*LARRRARASFP
Trigger: CGGGAAGGAAGCCCGCGCCCGCCGGCGAGCCAGTCAATAGCAGCAAGTGGAAGTCCACCTTCTCGCCCATCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS GCA 72 bp CACCTCCAACTGTGCCGCCTGCCACCCCGGAAAAGCTaGCCATGGCGTGCGAGTTGGTCAGTCTGGTGGCAG +
Preference number: 6 (lower is better)
Translates to: HLQLCRLPPRKS*PWRASWSVWWQ
Trigger: CTGCCACCAGACTGACCAACTCGCACGCCATGGGCAGCTTTTCCGGGGTGGCAGGCGGCACAGTTGGAGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446286.1
CDS GCA 72 bp ACCATGCCGCTACCAGCACGGAGGCCCACGGTCGTGTaGCATTGGGCACTGCTGTGTGTGGAGCCGATCCTG +
Preference number: 6 (lower is better)
Translates to: TMPLPARRPTVV*HWALLCVEPIL
Trigger: CAGGATCGGCTCCACACACAGCAGTGCCCAATGGCACACGACCGTGGGCCTCCGTGCTGGTAGCGGCATGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482433.1
CDS CCA 72 bp CCGGGCTCATGCTGCTCAAGTGAGGCAGCGAGAACTTaGTGCAGTCCAGCTCCAGGTGCAGCCGGCTGGCGT +
Preference number: 6 (lower is better)
Translates to: PGSCCSSEAART*CSPAPGAAGWR
Trigger: ACGCCAGCCGGCTGCACCTGGAGCTGGACTGCACCAAGTTCTCGCTGCCTCACTTGAGCAGCATGAGCCCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398665.8
ENST00000482433.1
ENST00000608122.1
CDS CCA 72 bp CTGCCACCCCGGAAAAGCTGCCCATGGCGTGCGAGTTaGTCAGTCTGGTGGCAGCGGACGACACGTGCACCA +
Preference number: 6 (lower is better)
Translates to: LPPRKSCPWRAS*SVWWQRTTRAP
Trigger: TGGTGCACGTGTCGTCCGCTGCCACCAGACTGACCAACTCGCACGCCATGGGCAGCTTTTCCGGGGTGGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398665.8
ENST00000446286.1
ENST00000457590.2
CDS CCA 72 bp CCGCTACCAGCACGGAGGCCCACGGTCGTGTGCCATTaGGCACTGCTGTGTGTGGAGCCGATCCTGAGTCAG +
Preference number: 6 (lower is better)
Translates to: PLPARRPTVVCH*ALLCVEPILSQ
Trigger: CTGACTCAGGATCGGCTCCACACACAGCAGTGCCCAATGGCACACGACCGTGGGCCTCCGTGCTGGTAGCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482433.1
CDS CAA 72 bp TTGGGCTTCCGCTCGGGGTTCGCAGTGTTCATCTTCTaGGGGCGCCCGCGCTTGCGGCCAGCCATCTTCCTC +
Preference number: 6 (lower is better)
Translates to: LGFRSGFAVFIF*GRPRLRPAIFL
Trigger: GAGGAAGATGGCTGGCCGCAAGCGCGGGCGCCCCAAGAAGATGAACACTGCGAACCCCGAGCGGAAGCCCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS CAA 72 bp AGCACCACGCTGGCCAGGGGAATGCTGACCGGGAGCTaGTTGGGCTGCACGGTGCTGAGCGGGATGCTGATG +
Preference number: 6 (lower is better)
Translates to: STTLARGMLTGS*LGCTVLSGMLM
Trigger: CATCAGCATCCCGCTCAGCACCGTGCAGCCCAACAAGCTCCCGGTCAGCATTCCCCTGGCCAGCGTGGTGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000482433.1
CDS CAA 72 bp GCGGTCAGGGGGCTGTGCTTGCTGGAGGGCGACTGCTaGGCACTGCCCGCACCAGTGGTGATGGTGAACACA +
Preference number: 6 (lower is better)
Translates to: AVRGLCLLEGDC*ALPAPVVMVNT
Trigger: TGTGTTCACCATCACCACTGGTGCGGGCAGTGCCAAGCAGTCGCCCTCCAGCAAGCACAGCCCCCTGACCGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000482433.1
CDS CAA 72 bp GAGATGGGCGAGAAGGTGGACTTCCACTTGCTGCTATaGACTGGCTCGCCGGCGGGCGCGGGCTTCCTTCCC +
Preference number: 6 (lower is better)
Translates to: EMGEKVDFHLLL*TGSPAGAGFLP
Trigger: GGGAAGGAAGCCCGCGCCCGCCGGCGAGCCAGTCAATAGCAGCAAGTGGAAGTCCACCTTCTCGCCCATCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS CAA 72 bp GAGGGGCGGGCGCCCTTGTGCGGGAGGGAGGTGAGCTaGATAGACAAAGAGGCGTTAGCAGGCGGCAGAGAG +
Preference number: 6 (lower is better)
Translates to: EGRAPLCGREVS*IDKEALAGGRE
Trigger: CTCTCTGCCGCCTGCTAACGCCTCTTTGTCTATCAAGCTCACCTCCCTCCCGCACAAGGGCGCCCGCCCCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457590.2
CDS CAA 72 bp GCCGCTACCAGCACGGAGGCCCACGGTCGTGTGCCATaGGGCACTGCTGTGTGTGGAGCCGATCCTGAGTCA +
Preference number: 6 (lower is better)
Translates to: AATSTEAHGRVP*GTAVCGADPES
Trigger: TGACTCAGGATCGGCTCCACACACAGCAGTGCCCAATGGCACACGACCGTGGGCCTCCGTGCTGGTAGCGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482433.1
CDS CAA 90 bp AGAAACCATGCCGCTACCAGCACGGAGGCCCACGGTCGTGTGCCATaGGGCACTGCTGTGTGTGGAGCCGATCCTGAGTCAGGGGCCTCC +
Preference number: 6 (lower is better)
Translates to: RNHAATSTEAHGRVP*GTAVCGADPESGAS
Trigger: GGAGGCCCCTGACTCAGGATCGGCTCCACACACAGCAGTGCCCAATGGCACACGACCGTGGGCCTCCGTGCTGGTAGCGGCATGGTTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482433.1
CDS CAA 90 bp CCGCCCGTGAGAGCCCGCCTCCGGGGACAGCCTTGCAGCAACGGTTaGGTGCAGTCATTTGAAAAGGCAGCAGAGGTCCAGCGACAGGGC +
Preference number: 6 (lower is better)
Translates to: PPVRARLRGQPCSNG*VQSFEKAAEVQRQG
Trigger: GCCCTGTCGCTGGACCTCTGCTGCCTTTTCAAATGACTGCACCAAACCGTTGCTGCAAGGCTGTCCCCGGAGGCGGGCTCTCACGGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586024.1
CDS TCA 72 bp CCTCGGGGCCCTTGTGGGGAAGAGAAGCACCATCACTaGAGCTGTGTAAACTCAGGTCCGCGGCCAGGCCCC +
Preference number: 6 (lower is better)
Translates to: PRGPCGEEKHHH*SCVNSGPRPGP
Trigger: GGGGCCTGGCCGCGGACCTGAGTTTACACAGCTTCAGTGATGGTGCTTCTCTTCCCCACAAGGGCCCCGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS TCA 72 bp CATGCTTCCCAGCCCACGATGAGTGGTGCACTTCCATaGCCACCCGGGGACAAAGGGCGGCCTCCCTGCTTC +
Preference number: 6 (lower is better)
Translates to: HASQPTMSGALP*PPGDKGRPPCF
Trigger: GAAGCAGGGAGGCCGCCCTTTGTCCCCGGGTGGTCATGGAAGTGCACCACTCATCGTGGGCTGGGAAGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482433.1
CDS GCA 72 bp GGCTCATGCTGCTCAAGTGAGGCAGCGAGAACTTGGTaGAGTCCAGCTCCAGGTGCAGCCGGCTGGCGTCAG +
Preference number: 6 (lower is better)
Translates to: GSCCSSEAARTW*SPAPGAAGWRQ
Trigger: CTGACGCCAGCCGGCTGCACCTGGAGCTGGACTGCACCAAGTTCTCGCTGCCTCACTTGAGCAGCATGAGCC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398665.8
ENST00000482433.1
ENST00000608122.1
CDS GCA 72 bp TACCTCCAACTGTGCCGCCTGCCACCCCGGAAAAGCTaGCCATGGCGTGCGAGTTGGTCAGTCTGGTGGCAG +
Preference number: 6 (lower is better)
Translates to: YLQLCRLPPRKS*PWRASWSVWWQ
Trigger: CTGCCACCAGACTGACCAACTCGCACGCCATGGGCAGCTTTTCCGGGGTGGCAGGCGGCACAGTTGGAGGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS GCA 72 bp AAGAAAGCTTGGTTAGGCGGGAGGGACGCGAGGCTCTaGAGAAGCGCGGGCTCAGGGTTAGAGGCCAGCAGC +
Preference number: 6 (lower is better)
Translates to: KKAWLGGRDARL*RSAGSGLEASS
Trigger: GCTGCTGGCCTCTAACCCTGAGCCCGCGCTTCTGCAGAGCCTCGCGTCCCTCCCGCCTAACCAAGCTTTCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457590.2
CDS GCA 72 bp TGCTCAGGCGGCACCTTCTCAAGGAACCAGAAACCATaGCGCTACCAGCACGGAGGCCCACGGTCGTGTGCC +
Preference number: 6 (lower is better)
Translates to: CSGGTFSRNQKP*RYQHGGPRSCA
Trigger: GGCACACGACCGTGGGCCTCCGTGCTGGTAGCGGCATGGTTTCTGGTTCCTTGAGAAGGTGCCGCCTGAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482433.1
CDS CCA 72 bp CCTGCTTCTCCTTCAACAGCTTCTCCAGCGACAGCGTaGCCCAGTCCAGCTGCAGCTCCTCGCAGCGAGCCT +
Preference number: 6 (lower is better)
Translates to: PASPSTASPATA*PSPAAAPRSEP
Trigger: AGGCTCGCTGCGAGGAGCTGCAGCTGGACTGGGCCACGCTGTCGCTGGAGAAGCTGTTGAAGGAGAAGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398665.8
ENST00000586024.1
ENST00000591498.1
ENST00000608122.1
CDS CCA 72 bp GGTCCTGAGGGCTCAGCTTCATGCTGCCAGGCACGCTaGGGCTCTGGTAGGGAAGGCCGTTCTCCTTGGTGT +
Preference number: 6 (lower is better)
Translates to: GPEGSASCCQAR*GSGREGRSPWC
Trigger: ACACCAAGGAGAACGGCCTTCCCTACCAGAGCCCCAGCGTGCCTGGCAGCATGAAGCTGAGCCCTCAGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000482433.1
CDS TCA 72 bp ACTGCTGGGCTCGTCCTCAGAGCCTGGCTCCTCGTCTaGGGTGAGTGGGGAGTAGTGTGCCCCATTGGTCTG +
Preference number: 6 (lower is better)
Translates to: TAGLVLRAWLLV*GEWGVVCPIGL
Trigger: CAGACCAATGGGGCACACTACTCCCCACTCACCTCAGACGAGGAGCCAGGCTCTGAGGACGAGCCCAGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS TCA 72 bp CCTGCTGCCGCTGGCTCTTCTCTAGCTCCACAATGCTaGTCTGCAGGAGGAGAGATGGTGTCAGGCCCGCCC +
Preference number: 6 (lower is better)
Translates to: PAAAGSSLAPQC*SAGGEMVSGPP
Trigger: GGGCGGGCCTGACACCATCTCTCCTCCTGCAGATCAGCATTGTGGAGCTAGAGAAGAGCCAGCGGCAGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482433.1
CDS TCA 72 bp GGAGCCCCCGAGAGCACTGGGGCCGACCTCACGGGCTaGATTAATACACCCAAGCAGGAGGTGTCAGTGTCG +
Preference number: 6 (lower is better)
Translates to: GAPESTGADLTG*INTPKQEVSVS
Trigger: CGACACTGACACCTCCTGCTTGGGTGTATTAATTCAGCCCGTGAGGTCGGCCCCAGTGCTCTCGGGGGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482433.1
CDS TCA 72 bp GCCTTGAAGGCCGCAGCCATGCTTCCCAGCCCACGATaGGTGGTGCACTTCCATGACCACCCGGGGACAAAG +
Preference number: 6 (lower is better)
Translates to: ALKAAAMLPSPR*VVHFHDHPGTK
Trigger: CTTTGTCCCCGGGTGGTCATGGAAGTGCACCACTCATCGTGGGCTGGGAAGCATGGCTGCGGCCTTCAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482433.1
CDS TCA 72 bp AAGTTGCCCTCTGGCCCCGTGATCTCAGAGACACCATaGGGAAAGCCCATGGCTGCGTGGCCTCCCTCCCTC +
Preference number: 6 (lower is better)
Translates to: KLPSGPVISETP*GKPMAAWPPSL
Trigger: GAGGGAGGGAGGCCACGCAGCCATGGGCTTTCCTCATGGTGTCTCTGAGATCACGGGGCCAGAGGGCAACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482433.1
CDS TCA 72 bp CCATCAACAGTGAAACCACGCTGGGGACACGTAAGGTaGGCAGGCGGGCACAGTGTCGACGGGATGGGGCTC +
Preference number: 6 (lower is better)
Translates to: PSTVKPRWGHVR*AGGHSVDGMGL
Trigger: GAGCCCCATCCCGTCGACACTGTGCCCGCCTGCTCACCTTACGTGTCCCCAGCGTGGTTTCACTGTTGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586024.1
CDS GCA 72 bp GCGGGCTTTGGAGGGAGACGGCTTCTTCACGGTGGCTaGTCCCGCCTTCTCTTCCTCAGCACCAGAGTCCAT +
Preference number: 6 (lower is better)
Translates to: AGFGGRRLLHGG*SRLLFLSTRVH
Trigger: ATGGACTCTGGTGCTGAGGAAGAGAAGGCGGGAGCAGCCACCGTGAAGAAGCCGTCTCCCTCCAAAGCCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS GCA 72 bp CAGCCGCCCGTGAGAGCCCGCCTCCGGGGACAGCCTTaGAGCAACGGTTTGGTGCAGTCATTTGAAAAGGCA +
Preference number: 6 (lower is better)
Translates to: QPPVRARLRGQP*SNGLVQSFEKA
Trigger: TGCCTTTTCAAATGACTGCACCAAACCGTTGCTGCAAGGCTGTCCCCGGAGGCGGGCTCTCACGGGCGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586024.1
CDS CCA 72 bp CACCGCAGAGCTCATAGCCAGCAGCCTGGCCGTTCATaGAGAGCTCCGGGCTCATGCTGCTCAAGTGAGGCA +
Preference number: 6 (lower is better)
Translates to: HRRAHSQQPGRS*RAPGSCCSSEA
Trigger: TGCCTCACTTGAGCAGCATGAGCCCGGAGCTCTCCATGAACGGCCAGGCTGCTGGCTATGAGCTCTGCGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398665.8
ENST00000482433.1
ENST00000608122.1
CDS CCA 72 bp GCACGCTGGGGCTCTGGTAGGGAAGGCCGTTCTCCTTaGTGTGCTCAGCTCTCGAATGCAGCTCACTGGCAG +
Preference number: 6 (lower is better)
Translates to: ARWGSGREGRSP*CAQLSNAAHWQ
Trigger: CTGCCAGTGAGCTGCATTCGAGAGCTGAGCACACCAAGGAGAACGGCCTTCCCTACCAGAGCCCCAGCGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000482433.1
CDS GCA 72 bp CAGCAGCCTGGCCGTTCATGGAGAGCTCCGGGCTCATaGTGCTCAAGTGAGGCAGCGAGAACTTGGTGCAGT +
Preference number: 6 (lower is better)
Translates to: QQPGRSWRAPGS*CSSEAARTWCS
Trigger: ACTGCACCAAGTTCTCGCTGCCTCACTTGAGCAGCATGAGCCCGGAGCTCTCCATGAACGGCCAGGCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398665.8
ENST00000482433.1
ENST00000608122.1
CDS GCA 72 bp CCCGCCTCCGGGGACAGCCTTGCAGCAACGGTTTGGTaGAGTCATTTGAAAAGGCAGCAGAGGTCCAGCGAC +
Preference number: 6 (lower is better)
Translates to: PASGDSLAATVW*SHLKRQQRSSD
Trigger: GTCGCTGGACCTCTGCTGCCTTTTCAAATGACTGCACCAAACCGTTGCTGCAAGGCTGTCCCCGGAGGCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586024.1
CDS CCA 72 bp TATGGTGCGGTCGATAGTGTGCAGGTAGTAGGAGACTaGCTTCCCCGTCCACGACACCGAGCCCTTCAGGGG +
Preference number: 6 (lower is better)
Translates to: YGAVDSVQVVGD*LPRPRHRALQG
Trigger: CCCCTGAAGGGCTCGGTGTCGTGGACGGGGAAGCCAGTCTCCTACTACCTGCACACTATCGACCGCACCATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS CCA 72 bp ATGGCTGCAGCTGAGCCCGATCCGCATCCCAGCTCGTaGGATGCAGGAAAGGGTGTCAGTAATGAGGCGTGG +
Preference number: 6 (lower is better)
Translates to: MAAAEPDPHPSS*DAGKGVSNEAW
Trigger: CCACGCCTCATTACTGACACCCTTTCCTGCATCCCACGAGCTGGGATGCGGATCGGGCTCAGCTGCAGCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482433.1
CDS CAA 90 bp CGCTTGCGGCCAGCCATCTTCCTCCCCTTCTTGTTTAGCTTCTTCTaGCGGGCTTTGGAGGGAGACGGCTTCTTCACGGTGGCTGCTCCC +
Preference number: 6 (lower is better)
Translates to: RLRPAIFLPFLFSFF*RALEGDGFFTVAAP
Trigger: GGGAGCAGCCACCGTGAAGAAGCCGTCTCCCTCCAAAGCCCGCAAGAAGAAGCTAAACAAGAAGGGGAGGAAGATGGCTGGCCGCAAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS CAA 90 bp TTCTTGGGGCGCCCGCGCTTGCGGCCAGCCATCTTCCTCCCCTTCTaGTTTAGCTTCTTCTTGCGGGCTTTGGAGGGAGACGGCTTCTTC +
Preference number: 6 (lower is better)
Translates to: FLGRPRLRPAIFLPF*FSFFLRALEGDGFF
Trigger: GAAGAAGCCGTCTCCCTCCAAAGCCCGCAAGAAGAAGCTAAACAAGAAGGGGAGGAAGATGGCTGGCCGCAAGCGCGGGCGCCCCAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS GCA 72 bp GGTTCGCAGTGTTCATCTTCTTGGGGCGCCCGCGCTTaGGGCCAGCCATCTTCCTCCCCTTCTTGTTTAGCT +
Preference number: 6 (lower is better)
Translates to: GSQCSSSWGARA*GQPSSSPSCLA
Trigger: AGCTAAACAAGAAGGGGAGGAAGATGGCTGGCCGCAAGCGCGGGCGCCCCAAGAAGATGAACACTGCGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS CAA 72 bp AGACACGGTCTGAGCGTGCAGGGCATCCAGTGCAGTTaGGTTCTTCTTGGGCTTCCGCTCGGGGTTCGCAGT +
Preference number: 6 (lower is better)
Translates to: RHGLSVQGIQCS*VLLGLPLGVRS
Trigger: ACTGCGAACCCCGAGCGGAAGCCCAAGAAGAACCAAACTGCACTGGATGCCCTGCACGCTCAGACCGTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS CAA 90 bp CCAGCCATCTTCCTCCCCTTCTTGTTTAGCTTCTTCTTGCGGGCTTaGGAGGGAGACGGCTTCTTCACGGTGGCTGCTCCCGCCTTCTCT +
Preference number: 6 (lower is better)
Translates to: PAIFLPFLFSFFLRA*EGDGFFTVAAPAFS
Trigger: AGAGAAGGCGGGAGCAGCCACCGTGAAGAAGCCGTCTCCCTCCAAAGCCCGCAAGAAGAAGCTAAACAAGAAGGGGAGGAAGATGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS TCA 72 bp GGGACAGCCTTGCAGCAACGGTTTGGTGCAGTCATTTaGAAAGGCAGCAGAGGTCCAGCGACAGGGCACCAG +
Preference number: 6 (lower is better)
Translates to: GTALQQRFGAVI*KGSRGPATGHQ
Trigger: CTGGTGCCCTGTCGCTGGACCTCTGCTGCCTTTTCAAATGACTGCACCAAACCGTTGCTGCAAGGCTGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586024.1
CDS GCA 72 bp TGCCTCTGCTTCTCCGAGATCTGGCTCTTCAGGGCCTaGTTCTCCTTCAACAGCTTCTCCAGCGACAGCGTG +
Preference number: 6 (lower is better)
Translates to: CLCFSEIWLFRA*FSFNSFSSDSV
Trigger: CACGCTGTCGCTGGAGAAGCTGTTGAAGGAGAAGCAGGCCCTGAAGAGCCAGATCTCGGAGAAGCAGAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398665.8
ENST00000586024.1
ENST00000608122.1
CDS GCA 72 bp GAGGTAGAAATCCTAGTTACCTCCAACTGTGCCGCCTaGCACCCCGGAAAAGCTGCCCATGGCGTGCGAGTT +
Preference number: 6 (lower is better)
Translates to: EVEILVTSNCAA*HPGKAAHGVRV
Trigger: AACTCGCACGCCATGGGCAGCTTTTCCGGGGTGGCAGGCGGCACAGTTGGAGGTAACTAGGATTTCTACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS CCA 72 bp CTGCTTTCTCGACGCCATAGTGATGTTTGCAGTTGGTaGCAGCAGCAACCTGGAGCACGACCTGGCCCACAC +
Preference number: 6 (lower is better)
Translates to: LLSRRHSDVCSW*QQQPGARPGPH
Trigger: GTGTGGGCCAGGTCGTGCTCCAGGTTGCTGCTGCCACCAACTGCAAACATCACTATGGCGTCGAGAAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000452696.5
CDS CCA 72 bp TCCTCCCCTTCTTGTTTAGCTTCTTCTTGCGGGCTTTaGAGGGAGACGGCTTCTTCACGGTGGCTGCTCCCG +
Preference number: 6 (lower is better)
Translates to: SSPSCLASSCGL*RETASSRWLLP
Trigger: CGGGAGCAGCCACCGTGAAGAAGCCGTCTCCCTCCAAAGCCCGCAAGAAGAAGCTAAACAAGAAGGGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS CCA 72 bp ATGAGGCCTCAGTGCAGGGGCGCAGCAAGGCGCTTCTaGAGTTGGCTGTTTGCCACCCAGTTGAAAATCTCC +
Preference number: 6 (lower is better)
Translates to: MRPQCRGAARRF*SWLFATQLKIS
Trigger: GGAGATTTTCAACTGGGTGGCAAACAGCCAACTCCAGAAGCGCCTTGCTGCGCCCCTGCACTGAGGCCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482433.1
CDS TCA 72 bp CCGAGCCCTTCAGGGGCGAGAGCTCCACCACGCGCATaGTGGTGCCGATGTCACTCAAGTTTCTACTGTTTA +
Preference number: 6 (lower is better)
Translates to: PSPSGARAPPRA*WCRCHSSFYCL
Trigger: TAAACAGTAGAAACTTGAGTGACATCGGCACCATCATGCGCGTGGTGGAGCTCTCGCCCCTGAAGGGCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS CCA 72 bp GAGCGTGCAGGGCATCCAGTGCAGTTTGGTTCTTCTTaGGCTTCCGCTCGGGGTTCGCAGTGTTCATCTTCT +
Preference number: 6 (lower is better)
Translates to: ERAGHPVQFGSS*ASARGSQCSSS
Trigger: AGAAGATGAACACTGCGAACCCCGAGCGGAAGCCCAAGAAGAACCAAACTGCACTGGATGCCCTGCACGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS CAA 72 bp TTCCTCCCCTTCTTGTTTAGCTTCTTCTTGCGGGCTTaGGAGGGAGACGGCTTCTTCACGGTGGCTGCTCCC +
Preference number: 6 (lower is better)
Translates to: FLPFLFSFFLRA*EGDGFFTVAAP
Trigger: GGGAGCAGCCACCGTGAAGAAGCCGTCTCCCTCCAAAGCCCGCAAGAAGAAGCTAAACAAGAAGGGGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS CAA 72 bp CAGCTGCTGGTTATGGGCGGAGATCTCCTTCTGCGCTaGAATCAGGTCGTTGTAGGTCAGCGCCTTCACACC +
Preference number: 6 (lower is better)
Translates to: QLLVMGGDLLLR*NQVVVGQRLHT
Trigger: GGTGTGAAGGCGCTGACCTACAACGACCTGATTCAAGCGCAGAAGGAGATCTCCGCCCATAACCAGCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398665.8
ENST00000586024.1
ENST00000591498.1
CDS TCA 72 bp GAACACAATCCTCCTCTTGGCTTCACTCTCAGGATCTaGGAAGCCGGAATCGGAGGGCAGGTCTCCCTTGCT +
Preference number: 6 (lower is better)
Translates to: EHNPPLGFTLRI*EAGIGGQVSLA
Trigger: AGCAAGGGAGACCTGCCCTCCGATTCCGGCTTCTCAGATCCTGAGAGTGAAGCCAAGAGGAGGATTGTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000482433.1
CDS GCA 72 bp GCGGTCCATGGTCTCCGCATACTTGGCCGGGATGTCTaGTTTCTCGACGCCATAGTGATGTTTGCAGTTGGT +
Preference number: 6 (lower is better)
Translates to: AVHGLRILGRDV*FLDAIVMFAVG
Trigger: ACCAACTGCAAACATCACTATGGCGTCGAGAAAGCAGACATCCCGGCCAAGTATGCGGAGACCATGGACCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000452696.5
CDS GCA 72 bp CTGGCTCTCTGCAGAAACTGGGCTAACAGCAGAGACTaGTCAGGCGGCACCTTCTCAAGGAACCAGAAACCA +
Preference number: 6 (lower is better)
Translates to: LALCRNWANSRD*SGGTFSRNQKP
Trigger: TGGTTTCTGGTTCCTTGAGAAGGTGCCGCCTGAGCAGTCTCTGCTGTTAGCCCAGTTTCTGCAGAGAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482433.1
CDS CCA 72 bp GTCTCCGGGGACGAGATGGCTGTAATCTCCAGGGGCTaGTTGATGTTACTGACCATGGAGTTGAGGTTGAGG +
Preference number: 6 (lower is better)
Translates to: VSGDEMAVISRG*LMLLTMELRLR
Trigger: CCTCAACCTCAACTCCATGGTCAGTAACATCAACCAGCCCCTGGAGATTACAGCCATCTCGTCCCCGGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398665.8
ENST00000457590.2
CDS CAA 72 bp CACAGCTGGTGGATGCTGTCGATGGCACGGTTGTACTaGTCGCAGAGCCTCTGCATGCTCTCGAAGCTTTTG +
Preference number: 6 (lower is better)
Translates to: HSWWMLSMARLY*SQSLCMLSKLL
Trigger: CAAAAGCTTCGAGAGCATGCAGAGGCTCTGCGACAAGTACAACCGTGCCATCGACAGCATCCACCAGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS CAA 72 bp CCAGCCATCTTCCTCCCCTTCTTGTTTAGCTTCTTCTaGCGGGCTTTGGAGGGAGACGGCTTCTTCACGGTG +
Preference number: 6 (lower is better)
Translates to: PAIFLPFLFSFF*RALEGDGFFTV
Trigger: CACCGTGAAGAAGCCGTCTCCCTCCAAAGCCCGCAAGAAGAAGCTAAACAAGAAGGGGAGGAAGATGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS CAA 72 bp TGCAGCTGGTGGATGCTGTCGATGGCACGGTTGTACTaGTCGCAGAGCCTCTGCATGCTCTCGAAGCTTTTG +
Preference number: 6 (lower is better)
Translates to: CSWWMLSMARLY*SQSLCMLSKLL
Trigger: CAAAAGCTTCGAGAGCATGCAGAGGCTCTGCGACAAGTACAACCGTGCCATCGACAGCATCCACCAGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452696.5
CDS TCA 72 bp AGTTGGTCCACACCGTCCTTGCATAGGTCTCGCGGTTaGGGTAGAAATCCTAGTTACCTCCAACTGTGCCGC +
Preference number: 6 (lower is better)
Translates to: SWSTPSLHRSRG*GRNPSYLQLCR
Trigger: GCGGCACAGTTGGAGGTAACTAGGATTTCTACCTCAACCGCGAGACCTATGCAAGGACGGTGTGGACCAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS TCA 72 bp TGGAGTTGGCTGTTTGCCACCCAGTTGAAAATCTCCTaGAACTGTCACTGCCTCTCGCAGAGCAGACCTCAC +
Preference number: 6 (lower is better)
Translates to: WSWLFATQLKIS*NCHCLSQSRPH
Trigger: GTGAGGTCTGCTCTGCGAGAGGCAGTGACAGTTTCAGGAGATTTTCAACTGGGTGGCAAACAGCCAACTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482433.1
CDS GCA 72 bp ACATGCTGTCTCTGCGGCTTCCACAACAGACAGGCCTaGAGTGTCAACAAAAGCCAAAGTGGCATCCTCTCT +
Preference number: 6 (lower is better)
Translates to: TCCLCGFHNRQA*SVNKSQSGILS
Trigger: AGAGAGGATGCCACTTTGGCTTTTGTTGACACTGCAGGCCTGTCTGTTGTGGAAGCCGCAGAGACAGCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482433.1
CDS TCA 72 bp AACACTCGTGTTGGCGATTCGCTCCCTCCACTCTTCTaGGAGGAAATCGCCTCTCTCCAATGTGTATTCTGC +
Preference number: 6 (lower is better)
Translates to: NTRVGDSLPPLF*EEIASLQCVFC
Trigger: GCAGAATACACATTGGAGAGAGGCGATTTCCTCTCAGAAGAGTGGAGGGAGCGAATCGCCAACACGAGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS CCA 72 bp CTGCAGTGTCAACAAAAGCCAAAGTGGCATCCTCTCTaGCTCTCTGCAGAAACTGGGCTAACAGCAGAGACT +
Preference number: 6 (lower is better)
Translates to: LQCQQKPKWHPL*LSAETGLTAET
Trigger: AGTCTCTGCTGTTAGCCCAGTTTCTGCAGAGAGCCAGAGAGGATGCCACTTTGGCTTTTGTTGACACTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482433.1
CDS TCA 72 bp CCTTCCTTCATGTTTGCAAACCGCTCCTTCAGCTGGTaGTCCACCTCAGGACCAAAGGCAAAATTATTCACA +
Preference number: 6 (lower is better)
Translates to: PSFMFANRSFSW*STSGPKAKLFT
Trigger: TGTGAATAATTTTGCCTTTGGTCCTGAGGTGGATCACCAGCTGAAGGAGCGGTTTGCAAACATGAAGGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398665.8
CDS TCA 72 bp TGGTGCCGATGTCACTCAAGTTTCTACTGTTTATTCTaGAGTTCAGAGGTGCAAAGGGTTTCGAGGACACGA +
Preference number: 6 (lower is better)
Translates to: WCRCHSSFYCLF*SSEVQRVSRTR
Trigger: TCGTGTCCTCGAAACCCTTTGCACCTCTGAACTTCAGAATAAACAGTAGAAACTTGAGTGACATCGGCACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398665.8