RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DOLPP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000167130

Ensembl transcript IDs: ENST00000327812.12, ENST00000372546.9, ENST00000406974.7, ENST00000412363.1, ENST00000480255.2

Found 382 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCCAGGGAGAGGCAGTCTGCCCTCTGGGCATAGGGCGAAGGGCCTaGGAAGCTGACCGGGAGCCCTCTGTTCACAGGGCAGCCACCGGA +
Preference number: 1 (lower is better)
Translates to: AQGEAVCPLGIGRRA*EADREPSVHRAATG
Trigger: TCCGGTGGCTGCCCTGTGAACAGAGGGCTCCCGGTCAGCTTCCCAGGCCCTTCGCCCTATGCCCAGAGGGCAGACTGCCTCTCCCTGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
3UTR TCA 90 bp CAGACGCGTGCTCGCTCTGGGCCCTGCCCCCAGACAGGGAAACACTaGCCGAGGTTCTGGAACGGCAACGGTGGCAGGGAGGGTGTGGGG +
Preference number: 1 (lower is better)
Translates to: QTRARSGPCPQTGKH*PRFWNGNGGREGVG
Trigger: CCCCACACCCTCCCTGCCACCGTTGCCGTTCCAGAACCTCGGTCAGTGTTTCCCTGTCTGGGGGCAGGGCCCAGAGCGAGCACGCGTCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR TCA 90 bp AGAGGCAGTCTGCCCTCTGGGCATAGGGCGAAGGGCCTGGGAAGCTaGCCGGGAGCCCTCTGTTCACAGGGCAGCCACCGGAGAGCAGAT +
Preference number: 1 (lower is better)
Translates to: RGSLPSGHRAKGLGS*PGALCSQGSHRRAD
Trigger: ATCTGCTCTCCGGTGGCTGCCCTGTGAACAGAGGGCTCCCGGTCAGCTTCCCAGGCCCTTCGCCCTATGCCCAGAGGGCAGACTGCCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
3UTR CCA 90 bp CGGGGTAGAACACAACGACAGCAGCCGCCAGACGCGTGCTCGCTCTaGGCCCTGCCCCCAGACAGGGAAACACTGACCGAGGTTCTGGAA +
Preference number: 1 (lower is better)
Translates to: RGRTQRQQPPDACSL*ALPPDRETLTEVLE
Trigger: TTCCAGAACCTCGGTCAGTGTTTCCCTGTCTGGGGGCAGGGCCCAGAGCGAGCACGCGTCTGGCGGCTGCTGTCGTTGTGTTCTACCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR GCA 90 bp GCGGGCCAGATCTGGAGGCTGGACCCAGCCACACCCACTGGTCACTaGAGTTTCGTCCCCAGCTTGCGTTGTCTGTTCCTGGCTTCTGCC +
Preference number: 1 (lower is better)
Translates to: AGQIWRLDPATPTGH*SFVPSLRCLFLASA
Trigger: GGCAGAAGCCAGGAACAGACAACGCAAGCTGGGGACGAAACTGCAGTGACCAGTGGGTGTGGCTGGGTCCAGCCTCCAGATCTGGCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327812.12
ENST00000412363.1
3UTR CCA 90 bp GCATCGTGCGGGCCAGATCTGGAGGCTGGACCCAGCCACACCCACTaGTCACTGCAGTTTCGTCCCCAGCTTGCGTTGTCTGTTCCTGGC +
Preference number: 1 (lower is better)
Translates to: ASCGPDLEAGPSHTH*SLQFRPQLALSVPG
Trigger: GCCAGGAACAGACAACGCAAGCTGGGGACGAAACTGCAGTGACCAGTGGGTGTGGCTGGGTCCAGCCTCCAGATCTGGCCCGCACGATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327812.12
ENST00000412363.1
3UTR GCA 90 bp CTGCTTCGTCCCTGTCTGTCATCCTGTCCATCCTGCAAGGCATCGTaGGGGCCAGATCTGGAGGCTGGACCCAGCCACACCCACTGGTCA +
Preference number: 1 (lower is better)
Translates to: LLRPCLSSCPSCKAS*GPDLEAGPSHTHWS
Trigger: TGACCAGTGGGTGTGGCTGGGTCCAGCCTCCAGATCTGGCCCGCACGATGCCTTGCAGGATGGACAGGATGACAGACAGGGACGAAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327812.12
ENST00000412363.1
3UTR CCA 90 bp ATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCAGATCTGGAGGCTaGACCCAGCCACACCCACTGGTCACTGCAGTTTCGTCCCCAGCT +
Preference number: 1 (lower is better)
Translates to: ILSILQGIVRARSGG*TQPHPLVTAVSSPA
Trigger: AGCTGGGGACGAAACTGCAGTGACCAGTGGGTGTGGCTGGGTCCAGCCTCCAGATCTGGCCCGCACGATGCCTTGCAGGATGGACAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327812.12
ENST00000412363.1
3UTR GCA 90 bp ATTCAGAGCACACAGAGGGAAGGACGAGGGACTTCGGGTGCCTGTTaGCTCACTCCTCTCCTCACGGCTCCTTCCCATTTTGTTCACGTG +
Preference number: 1 (lower is better)
Translates to: IQSTQREGRGTSGAC*LTPLLTAPSHFVHV
Trigger: CACGTGAACAAAATGGGAAGGAGCCGTGAGGAGAGGAGTGAGGCAACAGGCACCCGAAGTCCCTCGTCCTTCCCTCTGTGTGCTCTGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR TCA 90 bp CTTCTGCCCGGGTTACCGTGTACTCAAACCAGAGTACGTTGGGAATaGGGCTTGTGTCTCGGATTAGGAAGAACTCGGAGACAGGCCTGC +
Preference number: 1 (lower is better)
Translates to: LLPGLPCTQTRVRWE*GLCLGLGRTRRQAC
Trigger: GCAGGCCTGTCTCCGAGTTCTTCCTAATCCGAGACACAAGCCTCATTCCCAACGTACTCTGGTTTGAGTACACGGTAACCCGGGCAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327812.12
3UTR TCA 90 bp TTCGAACACAGATCCCGAGTGACCCAGTTCAGTCCTCAAAACTTCTaGGAGTCTGGAGGCGTCTCCTCTCCACAACTCCCTTTCAGAGTG +
Preference number: 1 (lower is better)
Translates to: FEHRSRVTQFSPQNF*ESGGVSSPQLPFRV
Trigger: CACTCTGAAAGGGAGTTGTGGAGAGGAGACGCCTCCAGACTCTCAGAAGTTTTGAGGACTGAACTGGGTCACTCGGGATCTGTGTTCGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR GCA 90 bp CTCACGGCTCCTTCCCATTTTGTTCACGTGGGGATGAAGACTAACTaGTACTGGATGGCAGGACAAGAAAGAGCTGTAAACAGCTTGGGT +
Preference number: 1 (lower is better)
Translates to: LTAPSHFVHVGMKTN*YWMAGQERAVNSLG
Trigger: ACCCAAGCTGTTTACAGCTCTTTCTTGTCCTGCCATCCAGTAGCAGTTAGTCTTCATCCCCACGTGAACAAAATGGGAAGGAGCCGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR GCA 90 bp GGACAAGAAAGAGCTGTAAACAGCTTGGGTCTGCTCACCCAAATGTaGAGGCTCCTTTGTCAGAAAGCGATTATTGTCTTAGGGACAGGG +
Preference number: 1 (lower is better)
Translates to: GQERAVNSLGLLTQM*RLLCQKAIIVLGTG
Trigger: CCCTGTCCCTAAGACAATAATCGCTTTCTGACAAAGGAGCCTGCACATTTGGGTGAGCAGACCCAAGCTGTTTACAGCTCTTTCTTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR CCA 90 bp GAGGGAAACATGGAAACCGACCTACCTTCCCTAGAAATAAGCCCCTaGTCTTGGCATCTGGAATGGCTTTTGGACACTGCCTTTAACAAA +
Preference number: 1 (lower is better)
Translates to: EGNMETDLPSLEISP*SWHLEWLLDTAFNK
Trigger: TTTGTTAAAGGCAGTGTCCAAAAGCCATTCCAGATGCCAAGACCAGGGGCTTATTTCTAGGGAAGGTAGGTCGGTTTCCATGTTTCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR-3UTR GCA 90 bp CAACGGTGGCAGGGAGGGTGTGGGGTATGCTCCCCTCCTCCTGGCACCCAGGCCCAGGGAGAGGCAGTCTaGCCTCTGGGCATAGGGCGA +
Preference number: 2 (lower is better)
Translates to: QRWQGGCGVCSPPPGTQAQGEAV*PLGIGR
Trigger: TCGCCCTATGCCCAGAGGGCAGACTGCCTCTCCCTG...GGCCTGGGTGCCAGGAGGAGGGGAGCATACCCCACACCCTCCCTGCCACCGTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR-3UTR CCA 90 bp CACGCCACCTGGAATTCCTGGCCCCGAGACCAGAGGCGCGAGCCCTCCTCCTCCGCCAGATCTGGAGGCTaGACCCAGCCACACCCACTG +
Preference number: 2 (lower is better)
Translates to: HATWNSWPRDQRREPSSSARSGG*TQPHPL
Trigger: CAGTGGGTGTGGCTGGGTCCAGCCTCCAGATCTGGC...GGAGGAGGAGGGCTCGCGCCTCTGGTCTCGGGGCCAGGAATTCCAGGTGGCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
3UTR-3UTR GCA 90 bp CACGCCACCTGGAATTCCTGGCCCCGAGACCAGAGGCGCGAGCCCTCCTCCTCCTCCTGCAAGGCATCGTaGGGGCCAGATCTGGAGGCT +
Preference number: 2 (lower is better)
Translates to: HATWNSWPRDQRREPSSSSCKAS*GPDLEA
Trigger: AGCCTCCAGATCTGGCCCGCACGATGCCTTGCAGGA...GGAGGAGGAGGGCTCGCGCCTCTGGTCTCGGGGCCAGGAATTCCAGGTGGCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
3UTR-3UTR GCA 90 bp GCCCTGCCCCCAGACAGGGAAACACTGACCGAGGTTCTGGAACGGCAACGGTGGGCCGAGGGCACTTTCTaGCCAGCCAGGGGCTGGCAG +
Preference number: 2 (lower is better)
Translates to: ALPPDRETLTEVLERQRWAEGTF*PARGWQ
Trigger: CTGCCAGCCCCTGGCTGGGCAGAAAGTGCCCTCGGC...CCACCGTTGCCGTTCCAGAACCTCGGTCAGTGTTTCCCTGTCTGGGGGCAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR-3UTR CCA 90 bp ACTGACCGAGGTTCTGGAACGGCAACGGTGGCAGGGAGGGTGTGGGGTATGCTCCACAGCGAGGGTCTCTaGCCACGGCCCCCAGGCAGC +
Preference number: 2 (lower is better)
Translates to: TDRGSGTATVAGRVWGMLHSEGL*PRPPGS
Trigger: GCTGCCTGGGGGCCGTGGCCAGAGACCCTCGCTGTG...GAGCATACCCCACACCCTCCCTGCCACCGTTGCCGTTCCAGAACCTCGGTCAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR-3UTR TCA 90 bp AACGACAGCAGCCGCCAGACGCGTGCTCGCTCTGGGCCCTGCCCCCAGACAGGGAAAGGCTCCACTTGGTaGCTTGGGTCTGTAGAGGTC +
Preference number: 2 (lower is better)
Translates to: NDSSRQTRARSGPCPQTGKGSTW*LGSVEV
Trigger: GACCTCTACAGACCCAAGTCACCAAGTGGAGCCTTT...CCCTGTCTGGGGGCAGGGCCCAGAGCGAGCACGCGTCTGGCGGCTGCTGTCGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR-3UTR GCA 90 bp CCTCCACCCCACACCCAGGTGCCCATGCCGAGGGCACTTTCTGCCCAGCCAGGGTCTGTTCCTGGCTTCTaGCCGGGTTACCGTGTACTC +
Preference number: 2 (lower is better)
Translates to: PPPHTQVPMPRALSAQPGSVPGF*PGYRVL
Trigger: GAGTACACGGTAACCCGGGCAGAAGCCAGGAACAGA...CCCTGGCTGGGCAGAAAGTGCCCTCGGCATGGGCACCTGGGTGTGGGGTGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327812.12
ENST00000412363.1
3UTR-3UTR CCA 90 bp CGGGGTAGAACACAACGACAGCAGCCGCCAGACGCGTGCTCGCTCTGGGCCCTGTCCTGGTTGAGGGGCTaGTTCAGCCCTTTGGTCCAC +
Preference number: 2 (lower is better)
Translates to: RGRTQRQQPPDACSLWALSWLRG*FSPLVH
Trigger: GTGGACCAAAGGGCTGAACCAGCCCCTCAACCAGGA...CAGGGCCCAGAGCGAGCACGCGTCTGGCGGCTGCTGTCGTTGTGTTCTACCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR-3UTR TCA 90 bp CAACGGTGGCAGGGAGGGTGTGGGGTATGCTCCCCTCCTCCTGGCACCCAGGCCAAAGGCTCCACTTGGTaGCTTGGGTCTGTAGAGGTC +
Preference number: 2 (lower is better)
Translates to: QRWQGGCGVCSPPPGTQAKGSTW*LGSVEV
Trigger: GACCTCTACAGACCCAAGTCACCAAGTGGAGCCTTT...GGCCTGGGTGCCAGGAGGAGGGGAGCATACCCCACACCCTCCCTGCCACCGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR-3UTR GCA 90 bp TCAGAGCACACAGAGGGAAGGACGAGGGACTTCGGGTGCCTGTTGCCTCACTCCGGAGGGTGTGGGGTATaGTCCCCTCCTCCTGGCACC +
Preference number: 2 (lower is better)
Translates to: SEHTEGRTRDFGCLLPHSGGCGV*SPPPGT
Trigger: GGTGCCAGGAGGAGGGGAGCATACCCCACACCCTCC...GGAGTGAGGCAACAGGCACCCGAAGTCCCTCGTCCTTCCCTCTGTGTGCTCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR-3UTR GCA 90 bp TCAGAGCACACAGAGGGAAGGACGAGGGACTTCGGGTGCCTGTTGCCTCACTCCGCTCGCTCTGGGCCCTaGCCCCAGACAGGGAAACAC +
Preference number: 2 (lower is better)
Translates to: SEHTEGRTRDFGCLLPHSARSGP*PQTGKH
Trigger: GTGTTTCCCTGTCTGGGGGCAGGGCCCAGAGCGAGC...GGAGTGAGGCAACAGGCACCCGAAGTCCCTCGTCCTTCCCTCTGTGTGCTCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR-3UTR CCA 90 bp GGAAACACTGACCGAGGTTCTGGAACGGCAACGGTGGCAGGGAGGGTGTGGGGTGCCAGATCTGGAGGCTaGACCCAGCCACACCCACTG +
Preference number: 2 (lower is better)
Translates to: GNTDRGSGTATVAGRVWGARSGG*TQPHPL
Trigger: CAGTGGGTGTGGCTGGGTCCAGCCTCCAGATCTGGC...ACCCCACACCCTCCCTGCCACCGTTGCCGTTCCAGAACCTCGGTCAGTGTTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR-3UTR CCA 90 bp CAGAGTGACTTAGAGATGGGGGTCCCTTTAGGAAGAGCCCTCCCACGAACCAGGGACGCGTGCTCGCTCTaGGCCCTGCCCCCAGACAGG +
Preference number: 2 (lower is better)
Translates to: QSDLEMGVPLGRALPRTRDACSL*ALPPDR
Trigger: CCTGTCTGGGGGCAGGGCCCAGAGCGAGCACGCGTC...CCTGGTTCGTGGGAGGGCTCTTCCTAAAGGGACCCCCATCTCTAAGTCACTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR-3UTR GCA 90 bp TGCTTCGTCCCTGTCTGTCATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCAGCCCAGGGAGAGCACGTaGCTCCACAGCAAGTCCAGG +
Preference number: 2 (lower is better)
Translates to: CFVPVCHPVHPARHRAGQPREST*LHSKSR
Trigger: CCTGGACTTGCTGTGGAGGCACGTGCTCTCCCTGGG...CTGGCCCGCACGATGCCTTGCAGGATGGACAGGATGACAGACAGGGACGAAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327812.12
3UTR-3UTR GCA 90 bp TCAGAGCACACAGAGGGAAGGACGAGGGACTTCGGGTGCCTGTTGCCTCACTCCACACCCAGGTGCCCATaGCGAGGGCACTTTCTGCCC +
Preference number: 2 (lower is better)
Translates to: SEHTEGRTRDFGCLLPHSTPRCP*RGHFLP
Trigger: GGGCAGAAAGTGCCCTCGGCATGGGCACCTGGGTGT...GGAGTGAGGCAACAGGCACCCGAAGTCCCTCGTCCTTCCCTCTGTGTGCTCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR-3UTR GCA 90 bp GACAAGGACATATTCAGAGCACACAGAGGGAAGGACGAGGGACTTCGGGTGCCTGCCGAGGGCACTTTCTaGCCAGCCAGGGGCTGGCAG +
Preference number: 2 (lower is better)
Translates to: DKDIFRAHRGKDEGLRVPAEGTF*PARGWQ
Trigger: CTGCCAGCCCCTGGCTGGGCAGAAAGTGCCCTCGGC...AGGCACCCGAAGTCCCTCGTCCTTCCCTCTGTGTGCTCTGAATATGTCCTTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR-3UTR CCA 90 bp CTGCCCCCAGACAGGGAAACACTGACCGAGGTTCTGGAACGGCAACGGTGGCAGTCCTGGTTGAGGGGCTaGTTCAGCCCTTTGGTCCAC +
Preference number: 2 (lower is better)
Translates to: LPPDRETLTEVLERQRWQSWLRG*FSPLVH
Trigger: GTGGACCAAAGGGCTGAACCAGCCCCTCAACCAGGA...CTGCCACCGTTGCCGTTCCAGAACCTCGGTCAGTGTTTCCCTGTCTGGGGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR-3UTR CCA 90 bp CAGAGTGACTTAGAGATGGGGGTCCCTTTAGGAAGAGCCCTCCCACGAACCAGGGCCACCTGGAATTCCTaGCCCCGAGACCAGAGGCGC +
Preference number: 2 (lower is better)
Translates to: QSDLEMGVPLGRALPRTRATWNS*PRDQRR
Trigger: GCGCCTCTGGTCTCGGGGCCAGGAATTCCAGGTGGC...CCTGGTTCGTGGGAGGGCTCTTCCTAAAGGGACCCCCATCTCTAAGTCACTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR-3UTR CCA 90 bp GGAAACACTGACCGAGGTTCTGGAACGGCAACGGTGGCAGGGAGGGTGTGGGGTACTTCTCACGCCACCTaGAATTCCTGGCCCCGAGAC +
Preference number: 2 (lower is better)
Translates to: GNTDRGSGTATVAGRVWGTSHAT*NSWPRD
Trigger: GTCTCGGGGCCAGGAATTCCAGGTGGCGTGAGAAGT...ACCCCACACCCTCCCTGCCACCGTTGCCGTTCCAGAACCTCGGTCAGTGTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR-3UTR CCA 90 bp TTCAGAGCACACAGAGGGAAGGACGAGGGACTTCGGGTGCCTGTTGCCTCACTCCCCAGCCACACCCACTaGTCACTGCAGTTTCGTCCC +
Preference number: 2 (lower is better)
Translates to: FRAHRGKDEGLRVPVASLPSHTH*SLQFRP
Trigger: GGGACGAAACTGCAGTGACCAGTGGGTGTGGCTGGG...GAGTGAGGCAACAGGCACCCGAAGTCCCTCGTCCTTCCCTCTGTGTGCTCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327812.12
3UTR-3UTR CCA 90 bp CACGCCACCTGGAATTCCTGGCCCCGAGACCAGAGGCGCGAGCCCTCCTCCTCCGCTGGTTCAGCCCTTTaGTCCACCTTGTTCATTAAA +
Preference number: 2 (lower is better)
Translates to: HATWNSWPRDQRREPSSSAGSAL*STLFIK
Trigger: TTTAATGAACAAGGTGGACCAAAGGGCTGAACCAGC...GGAGGAGGAGGGCTCGCGCCTCTGGTCTCGGGGCCAGGAATTCCAGGTGGCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
3UTR-3UTR CCA 90 bp GTGGGGAGGATTCGAACACAGATCCCGAGTGACCCAGTTCAGTCCTCAAAACTTCACAGCGAGGGTCTCTaGCCACGGCCCCCAGGCAGC +
Preference number: 2 (lower is better)
Translates to: VGRIRTQIPSDPVQSSKLHSEGL*PRPPGS
Trigger: GCTGCCTGGGGGCCGTGGCCAGAGACCCTCGCTGTG...AAGTTTTGAGGACTGAACTGGGTCACTCGGGATCTGTGTTCGAATCCTCCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR-3UTR CCA 90 bp AAAGGGGTGGGGAGGATTCGAACACAGATCCCGAGTGACCCAGTTCAGTCCTCAATAGGGCGAAGGGCCTaGGAAGCTGACCGGGAGCCC +
Preference number: 2 (lower is better)
Translates to: KGVGRIRTQIPSDPVQSSIGRRA*EADREP
Trigger: GGGCTCCCGGTCAGCTTCCCAGGCCCTTCGCCCTAT...TGAGGACTGAACTGGGTCACTCGGGATCTGTGTTCGAATCCTCCCCACCCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR-3UTR CCA 90 bp TCAGAGCACACAGAGGGAAGGACGAGGGACTTCGGGTGCCTGTTGCCTCACTCCCAGAGAAAGCCCTTGTaGTGTTGGGTCAGTACGGGG +
Preference number: 2 (lower is better)
Translates to: SEHTEGRTRDFGCLLPHSQRKPL*CWVSTG
Trigger: CCCCGTACTGACCCAACACCACAAGGGCTTTCTCTG...GGAGTGAGGCAACAGGCACCCGAAGTCCCTCGTCCTTCCCTCTGTGTGCTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR-3UTR TCA 90 bp CATATTCAGAGCACACAGAGGGAAGGACGAGGGACTTCGGGTGCCTGTTGCCTCCAGACAGGGAAACACTaGCCGAGGTTCTGGAACGGC +
Preference number: 2 (lower is better)
Translates to: HIQSTQREGRGTSGACCLQTGKH*PRFWNG
Trigger: GCCGTTCCAGAACCTCGGTCAGTGTTTCCCTGTCTG...GAGGCAACAGGCACCCGAAGTCCCTCGTCCTTCCCTCTGTGTGCTCTGAATATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR-3UTR GCA 90 bp TTCAGAGCACACAGAGGGAAGGACGAGGGACTTCGGGTGCCTGTTGCCTCACTCTCTGTTCCTGGCTTCTaGCCGGGTTACCGTGTACTC +
Preference number: 2 (lower is better)
Translates to: FRAHRGKDEGLRVPVASLSVPGF*PGYRVL
Trigger: GAGTACACGGTAACCCGGGCAGAAGCCAGGAACAGA...GAGTGAGGCAACAGGCACCCGAAGTCCCTCGTCCTTCCCTCTGTGTGCTCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327812.12
3UTR-3UTR GCA 90 bp AAAGGGGTGGGGAGGATTCGAACACAGATCCCGAGTGACCCAGTTCAGTCCTCAACTTCGGGTGCCTGTTaGCTCACTCCTCTCCTCACG +
Preference number: 2 (lower is better)
Translates to: KGVGRIRTQIPSDPVQSSTSGAC*LTPLLT
Trigger: CGTGAGGAGAGGAGTGAGGCAACAGGCACCCGAAGT...TGAGGACTGAACTGGGTCACTCGGGATCTGTGTTCGAATCCTCCCCACCCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR CAA 90 bp GATTATTGTCTTAGGGACAGGGGACCAGAGAAAGCCCTTGTGGTGTaGGGTCAGTACGGGGTAGAACACAACGACAGCAGCCGCCAGACG +
Preference number: 2 (lower is better)
Translates to: DYCLRDRGPEKALVV*GQYGVEHNDSSRQT
Trigger: CGTCTGGCGGCTGCTGTCGTTGTGTTCTACCCCGTACTGACCCAACACCACAAGGGCTTTCTCTGGTCCCCTGTCCCTAAGACAATAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR-3UTR GCA 90 bp ACCAGAGAAAGCCCTTGTGGTGTTGGGTCAGTACGGGGTAGAACACAACGACAGTCATCCTGTCCATCCTaGAAGGCATCGTGCGGGCCA +
Preference number: 2 (lower is better)
Translates to: TRESPCGVGSVRGRTQRQSSCPS*KASCGP
Trigger: TGGCCCGCACGATGCCTTGCAGGATGGACAGGATGA...CTGTCGTTGTGTTCTACCCCGTACTGACCCAACACCACAAGGGCTTTCTCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR-3UTR TCA 90 bp ACGGCTCCTTCCCATTTTGTTCACGTGGGGATGAAGACTAACTGCTACTGGATGCAGACAGGGAAACACTaGCCGAGGTTCTGGAACGGC +
Preference number: 2 (lower is better)
Translates to: TAPSHFVHVGMKTNCYWMQTGKH*PRFWNG
Trigger: GCCGTTCCAGAACCTCGGTCAGTGTTTCCCTGTCTG...CATCCAGTAGCAGTTAGTCTTCATCCCCACGTGAACAAAATGGGAAGGAGCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR-3UTR GCA 90 bp CATGGAAACCGACCTACCTTCCCTAGAAATAAGCCCCTGGTCTTGGCATCTGGAACACCCACTGGTCACTaGAGTTTCGTCCCCAGCTTG +
Preference number: 2 (lower is better)
Translates to: HGNRPTFPRNKPLVLASGTPTGH*SFVPSL
Trigger: CAAGCTGGGGACGAAACTGCAGTGACCAGTGGGTGT...TCCAGATGCCAAGACCAGGGGCTTATTTCTAGGGAAGGTAGGTCGGTTTCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327812.12
3UTR CAA 90 bp TTCCTGGCTTCTGCCCGGGTTACCGTGTACTCAAACCAGAGTACGTaGGGAATGAGGCTTGTGTCTCGGATTAGGAAGAACTCGGAGACA +
Preference number: 2 (lower is better)
Translates to: FLASARVTVYSNQST*GMRLVSRIRKNSET
Trigger: TGTCTCCGAGTTCTTCCTAATCCGAGACACAAGCCTCATTCCCAACGTACTCTGGTTTGAGTACACGGTAACCCGGGCAGAAGCCAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327812.12
ENST00000412363.1
3UTR-3UTR TCA 90 bp CATGGAAACCGACCTACCTTCCCTAGAAATAAGCCCCTGGTCTTGGCATCTGGAAAAGGCTCCACTTGGTaGCTTGGGTCTGTAGAGGTC +
Preference number: 2 (lower is better)
Translates to: HGNRPTFPRNKPLVLASGKGSTW*LGSVEV
Trigger: GACCTCTACAGACCCAAGTCACCAAGTGGAGCCTTT...TCCAGATGCCAAGACCAGGGGCTTATTTCTAGGGAAGGTAGGTCGGTTTCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR-3UTR GCA 90 bp GTTACCGTGTACTCAAACCAGAGTACGTTGGGAATGAGGCTTGTGTCTCGGATTACTCGGAGACAGGCCTaGTGTAGGAGACTAGGAAGG +
Preference number: 2 (lower is better)
Translates to: VTVYSNQSTLGMRLVSRITRRQA*CRRLGR
Trigger: CCTTCCTAGTCTCCTACAGCAGGCCTGTCTCCGAGT...AATCCGAGACACAAGCCTCATTCCCAACGTACTCTGGTTTGAGTACACGGTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327812.12
3UTR-3UTR CCA 90 bp GACAAGGACATATTCAGAGCACACAGAGGGAAGGACGAGGGACTTCGGGTGCCTGCTGGTTCAGCCCTTTaGTCCACCTTGTTCATTAAA +
Preference number: 2 (lower is better)
Translates to: DKDIFRAHRGKDEGLRVPAGSAL*STLFIK
Trigger: TTTAATGAACAAGGTGGACCAAAGGGCTGAACCAGC...AGGCACCCGAAGTCCCTCGTCCTTCCCTCTGTGTGCTCTGAATATGTCCTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR-3UTR CCA 90 bp ATAAAAATAACGGGAGGGAAACATGGAAACCGACCTACCTTCCCTAGAAATAAGGCCACCTGGAATTCCTaGCCCCGAGACCAGAGGCGC +
Preference number: 2 (lower is better)
Translates to: IKITGGKHGNRPTFPRNKATWNS*PRDQRR
Trigger: GCGCCTCTGGTCTCGGGGCCAGGAATTCCAGGTGGC...CTTATTTCTAGGGAAGGTAGGTCGGTTTCCATGTTTCCCTCCCGTTATTTTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR-3UTR CCA 90 bp AAAATAAAAATAACGGGAGGGAAACATGGAAACCGACCTACCTTCCCTAGAAATGCCAGATCTGGAGGCTaGACCCAGCCACACCCACTG +
Preference number: 2 (lower is better)
Translates to: KIKITGGKHGNRPTFPRNARSGG*TQPHPL
Trigger: CAGTGGGTGTGGCTGGGTCCAGCCTCCAGATCTGGC...ATTTCTAGGGAAGGTAGGTCGGTTTCCATGTTTCCCTCCCGTTATTTTTATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR-3UTR CCA 90 bp AAAATAAAAATAACGGGAGGGAAACATGGAAACCGACCTACCTTCCCTAGAAATCTGGAACGGCAACGGTaGCAGGGAGGGTGTGGGGTA +
Preference number: 2 (lower is better)
Translates to: KIKITGGKHGNRPTFPRNLERQR*QGGCGV
Trigger: TACCCCACACCCTCCCTGCCACCGTTGCCGTTCCAG...ATTTCTAGGGAAGGTAGGTCGGTTTCCATGTTTCCCTCCCGTTATTTTTATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR-3UTR CCA 90 bp AAAATAAAAATAACGGGAGGGAAACATGGAAACCGACCTACCTTCCCTAGAAATTCCTGGTTGAGGGGCTaGTTCAGCCCTTTGGTCCAC +
Preference number: 2 (lower is better)
Translates to: KIKITGGKHGNRPTFPRNSWLRG*FSPLVH
Trigger: GTGGACCAAAGGGCTGAACCAGCCCCTCAACCAGGA...ATTTCTAGGGAAGGTAGGTCGGTTTCCATGTTTCCCTCCCGTTATTTTTATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR-3UTR CCA 90 bp AAAATAAAAATAACGGGAGGGAAACATGGAAACCGACCTACCTTCCCTAGAAATACTTCTCACGCCACCTaGAATTCCTGGCCCCGAGAC +
Preference number: 2 (lower is better)
Translates to: KIKITGGKHGNRPTFPRNTSHAT*NSWPRD
Trigger: GTCTCGGGGCCAGGAATTCCAGGTGGCGTGAGAAGT...ATTTCTAGGGAAGGTAGGTCGGTTTCCATGTTTCCCTCCCGTTATTTTTATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR-3UTR CCA 90 bp AAAATAAAAATAACGGGAGGGAAACATGGAAACCGACCTACCTTCCCTAGAAATCTCCACTTGGTGACTTaGGTCTGTAGAGGTCTCTGC +
Preference number: 2 (lower is better)
Translates to: KIKITGGKHGNRPTFPRNLHLVT*VCRGLC
Trigger: GCAGAGACCTCTACAGACCCAAGTCACCAAGTGGAG...ATTTCTAGGGAAGGTAGGTCGGTTTCCATGTTTCCCTCCCGTTATTTTTATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR-3UTR GCA 90 bp AAAATAAAAATAACGGGAGGGAAACATGGAAACCGACCTACCTTCCCTAGAAATGTCTGTAGAGGTCTCTaGTTCGTCCCTGTCTGTCAT +
Preference number: 2 (lower is better)
Translates to: KIKITGGKHGNRPTFPRNVCRGL*FVPVCH
Trigger: ATGACAGACAGGGACGAAGCAGAGACCTCTACAGAC...ATTTCTAGGGAAGGTAGGTCGGTTTCCATGTTTCCCTCCCGTTATTTTTATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR-3UTR GCA 90 bp ATTTCATTGATTTTTCTTAAATCAAACCACCTCATACTCGGCTTGTCTCAGGCAGTCTGTAGAGGTCTCTaGTTCGTCCCTGTCTGTCAT +
Preference number: 2 (lower is better)
Translates to: ISLIFLKSNHLILGLSQAVCRGL*FVPVCH
Trigger: ATGACAGACAGGGACGAAGCAGAGACCTCTACAGAC...TGCCTGAGACAAGCCGAGTATGAGGTGGTTTGATTTAAGAAAAATCAATGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR-3UTR GCA 90 bp ATTTCATTGATTTTTCTTAAATCAAACCACCTCATACTCGGCTTGTCTCAGGCACTGCTCACCCAAATGTaGAGGCTCCTTTGTCAGAAA +
Preference number: 2 (lower is better)
Translates to: ISLIFLKSNHLILGLSQALLTQM*RLLCQK
Trigger: TTTCTGACAAAGGAGCCTGCACATTTGGGTGAGCAG...TGCCTGAGACAAGCCGAGTATGAGGTGGTTTGATTTAAGAAAAATCAATGAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR GCA 72 bp CGGGGTAGAACACAACGACAGCAGCCGCCAGACGCGTaGTCGCTCTGGGCCCTGCCCCCAGACAGGGAAACA +
Preference number: 3 (lower is better)
Translates to: RGRTQRQQPPDA*SLWALPPDRET
Trigger: TGTTTCCCTGTCTGGGGGCAGGGCCCAGAGCGAGCACGCGTCTGGCGGCTGCTGTCGTTGTGTTCTACCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR CCA 72 bp GAGGCAGTCTGCCCTCTGGGCATAGGGCGAAGGGCCTaGGAAGCTGACCGGGAGCCCTCTGTTCACAGGGCA +
Preference number: 3 (lower is better)
Translates to: EAVCPLGIGRRA*EADREPSVHRA
Trigger: TGCCCTGTGAACAGAGGGCTCCCGGTCAGCTTCCCAGGCCCTTCGCCCTATGCCCAGAGGGCAGACTGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
3UTR CCA 72 bp ACACAACGACAGCAGCCGCCAGACGCGTGCTCGCTCTaGGCCCTGCCCCCAGACAGGGAAACACTGACCGAG +
Preference number: 3 (lower is better)
Translates to: TQRQQPPDACSL*ALPPDRETLTE
Trigger: CTCGGTCAGTGTTTCCCTGTCTGGGGGCAGGGCCCAGAGCGAGCACGCGTCTGGCGGCTGCTGTCGTTGTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR-3UTR CAA 90 bp CACCCAGGTGCCCATGCCGAGGGCACTTTCTGCCCAGCCAGGGGCTGGCAGCAGAGTTTCGTCCCCAGCTaGCGTTGTCTGTTCCTGGCT +
Preference number: 3 (lower is better)
Translates to: HPGAHAEGTFCPARGWQQSFVPS*RCLFLA
Trigger: AGCCAGGAACAGACAACGCAAGCTGGGGACGAAACT...CTGCTGCCAGCCCCTGGCTGGGCAGAAAGTGCCCTCGGCATGGGCACCTGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327812.12
ENST00000412363.1
3UTR GCA 72 bp CCCTGTCTGTCATCCTGTCCATCCTGCAAGGCATCGTaGGGGCCAGATCTGGAGGCTGGACCCAGCCACACC +
Preference number: 3 (lower is better)
Translates to: PCLSSCPSCKAS*GPDLEAGPSHT
Trigger: GGTGTGGCTGGGTCCAGCCTCCAGATCTGGCCCGCACGATGCCTTGCAGGATGGACAGGATGACAGACAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
3UTR CCA 72 bp ATCCTGCAAGGCATCGTGCGGGCCAGATCTGGAGGCTaGACCCAGCCACACCCACTGGTCACTGCAGTTTCG +
Preference number: 3 (lower is better)
Translates to: ILQGIVRARSGG*TQPHPLVTAVS
Trigger: CGAAACTGCAGTGACCAGTGGGTGTGGCTGGGTCCAGCCTCCAGATCTGGCCCGCACGATGCCTTGCAGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327812.12
ENST00000412363.1
3UTR CCA 72 bp AGGGAAACACTGACCGAGGTTCTGGAACGGCAACGGTaGCAGGGAGGGTGTGGGGTATGCTCCCCTCCTCCT +
Preference number: 3 (lower is better)
Translates to: RETLTEVLERQR*QGGCGVCSPPP
Trigger: AGGAGGAGGGGAGCATACCCCACACCCTCCCTGCCACCGTTGCCGTTCCAGAACCTCGGTCAGTGTTTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR TCA 72 bp AAGAGCCCTCCCACGAACCAGGCTGATAGGGATCTGTaGGCCCACACCCCAGACACAGGTTTGAGGGGGACC +
Preference number: 3 (lower is better)
Translates to: KSPPTNQADRDL*AHTPDTGLRGT
Trigger: GGTCCCCCTCAAACCTGTGTCTGGGGTGTGGGCTCACAGATCCCTATCAGCCTGGTTCGTGGGAGGGCTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR GCA 72 bp AGGAAGGCCACAGCGAGGAGTCCCAGGGAGAGCACGTaGCTCCACAGCAAGTCCAGGAACCTGGCGTTGTTT +
Preference number: 3 (lower is better)
Translates to: RKATARSPREST*LHSKSRNLALF
Trigger: AAACAACGCCAGGTTCCTGGACTTGCTGTGGAGGCACGTGCTCTCCCTGGGACTCCTCGCTGTGGCCTTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327812.12
3UTR-3UTR CAA 90 bp TCCTCCACCCCACACCCAGGTGCCCATGCCGAGGGCACTTTCTGCCCAGCCAGGTCAAACCAGAGTACGTaGGGAATGAGGCTTGTGTCT +
Preference number: 3 (lower is better)
Translates to: SSTPHPGAHAEGTFCPARSNQST*GMRLVS
Trigger: AGACACAAGCCTCATTCCCAACGTACTCTGGTTTGA...CCTGGCTGGGCAGAAAGTGCCCTCGGCATGGGCACCTGGGTGTGGGGTGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327812.12
ENST00000412363.1
3UTR GCA 72 bp TCTCTGCTTCGTCCCTGTCTGTCATCCTGTCCATCCTaGAAGGCATCGTGCGGGCCAGATCTGGAGGCTGGA +
Preference number: 3 (lower is better)
Translates to: SLLRPCLSSCPS*KASCGPDLEAG
Trigger: TCCAGCCTCCAGATCTGGCCCGCACGATGCCTTGCAGGATGGACAGGATGACAGACAGGGACGAAGCAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
3UTR GCA 72 bp ACACAGAGGGAAGGACGAGGGACTTCGGGTGCCTGTTaGCTCACTCCTCTCCTCACGGCTCCTTCCCATTTT +
Preference number: 3 (lower is better)
Translates to: TQREGRGTSGAC*LTPLLTAPSHF
Trigger: AAAATGGGAAGGAGCCGTGAGGAGAGGAGTGAGGCAACAGGCACCCGAAGTCCCTCGTCCTTCCCTCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR-3UTR CAA 90 bp CAGAGTGACTTAGAGATGGGGGTCCCTTTAGGAAGAGCCCTCCCACGAACCAGGAAAGCCCTTGTGGTGTaGGGTCAGTACGGGGTAGAA +
Preference number: 3 (lower is better)
Translates to: QSDLEMGVPLGRALPRTRKALVV*GQYGVE
Trigger: TTCTACCCCGTACTGACCCAACACCACAAGGGCTTT...CCTGGTTCGTGGGAGGGCTCTTCCTAAAGGGACCCCCATCTCTAAGTCACTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR-3UTR CAA 90 bp GACAAGGACATATTCAGAGCACACAGAGGGAAGGACGAGGGACTTCGGGTGCCTGACCAGAGAAAGCCCTaGTGGTGTTGGGTCAGTACG +
Preference number: 3 (lower is better)
Translates to: DKDIFRAHRGKDEGLRVPDQRKP*WCWVST
Trigger: CGTACTGACCCAACACCACAAGGGCTTTCTCTGGTC...AGGCACCCGAAGTCCCTCGTCCTTCCCTCTGTGTGCTCTGAATATGTCCTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR GCA 72 bp AGGCTCCACTTGGTGACTTGGGTCTGTAGAGGTCTCTaGTTCGTCCCTGTCTGTCATCCTGTCCATCCTGCA +
Preference number: 3 (lower is better)
Translates to: RLHLVTWVCRGL*FVPVCHPVHPA
Trigger: TGCAGGATGGACAGGATGACAGACAGGGACGAAGCAGAGACCTCTACAGACCCAAGTCACCAAGTGGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
3UTR-3UTR CAA 90 bp ACCAGAGAAAGCCCTTGTGGTGTTGGGTCAGTACGGGGTAGAACACAACGACAGAGTTTCGTCCCCAGCTaGCGTTGTCTGTTCCTGGCT +
Preference number: 3 (lower is better)
Translates to: TRESPCGVGSVRGRTQRQSFVPS*RCLFLA
Trigger: AGCCAGGAACAGACAACGCAAGCTGGGGACGAAACT...CTGTCGTTGTGTTCTACCCCGTACTGACCCAACACCACAAGGGCTTTCTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327812.12
3UTR TCA 72 bp AGATCCCGAGTGACCCAGTTCAGTCCTCAAAACTTCTaGGAGTCTGGAGGCGTCTCCTCTCCACAACTCCCT +
Preference number: 3 (lower is better)
Translates to: RSRVTQFSPQNF*ESGGVSSPQLP
Trigger: AGGGAGTTGTGGAGAGGAGACGCCTCCAGACTCTCAGAAGTTTTGAGGACTGAACTGGGTCACTCGGGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR-3UTR CAA 90 bp AAAATAAAAATAACGGGAGGGAAACATGGAAACCGACCTACCTTCCCTAGAAATCCCCCAGGGTCCTGGTaGAGGGGCTGGTTCAGCCCT +
Preference number: 3 (lower is better)
Translates to: KIKITGGKHGNRPTFPRNPPGSW*RGWFSP
Trigger: AGGGCTGAACCAGCCCCTCAACCAGGACCCTGGGGG...ATTTCTAGGGAAGGTAGGTCGGTTTCCATGTTTCCCTCCCGTTATTTTTATTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR CCA 72 bp AGTGACCCAGTTCAGTCCTCAAAACTTCTGAGAGTCTaGAGGCGTCTCCTCTCCACAACTCCCTTTCAGAGT +
Preference number: 3 (lower is better)
Translates to: SDPVQSSKLLRV*RRLLSTTPFQS
Trigger: ACTCTGAAAGGGAGTTGTGGAGAGGAGACGCCTCCAGACTCTCAGAAGTTTTGAGGACTGAACTGGGTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR CCA 72 bp ATGGAAACCGACCTACCTTCCCTAGAAATAAGCCCCTaGTCTTGGCATCTGGAATGGCTTTTGGACACTGCC +
Preference number: 3 (lower is better)
Translates to: METDLPSLEISP*SWHLEWLLDTA
Trigger: GGCAGTGTCCAAAAGCCATTCCAGATGCCAAGACCAGGGGCTTATTTCTAGGGAAGGTAGGTCGGTTTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR TCA 72 bp GGGTTACCGTGTACTCAAACCAGAGTACGTTGGGAATaGGGCTTGTGTCTCGGATTAGGAAGAACTCGGAGA +
Preference number: 3 (lower is better)
Translates to: GLPCTQTRVRWE*GLCLGLGRTRR
Trigger: TCTCCGAGTTCTTCCTAATCCGAGACACAAGCCTCATTCCCAACGTACTCTGGTTTGAGTACACGGTAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327812.12
ENST00000412363.1
3UTR TCA 72 bp TCCTCACGGCTCCTTCCCATTTTGTTCACGTGGGGATaGAGACTAACTGCTACTGGATGGCAGGACAAGAAA +
Preference number: 3 (lower is better)
Translates to: SSRLLPILFTWG*RLTATGWQDKK
Trigger: TTTCTTGTCCTGCCATCCAGTAGCAGTTAGTCTTCATCCCCACGTGAACAAAATGGGAAGGAGCCGTGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR GCA 72 bp CCTTCCCATTTTGTTCACGTGGGGATGAAGACTAACTaGTACTGGATGGCAGGACAAGAAAGAGCTGTAAAC +
Preference number: 3 (lower is better)
Translates to: PSHFVHVGMKTN*YWMAGQERAVN
Trigger: GTTTACAGCTCTTTCTTGTCCTGCCATCCAGTAGCAGTTAGTCTTCATCCCCACGTGAACAAAATGGGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR GCA 72 bp AGAGCTGTAAACAGCTTGGGTCTGCTCACCCAAATGTaGAGGCTCCTTTGTCAGAAAGCGATTATTGTCTTA +
Preference number: 3 (lower is better)
Translates to: RAVNSLGLLTQM*RLLCQKAIIVL
Trigger: TAAGACAATAATCGCTTTCTGACAAAGGAGCCTGCACATTTGGGTGAGCAGACCCAAGCTGTTTACAGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR-3UTR CAA 90 bp ATAAAAATAACGGGAGGGAAACATGGAAACCGACCTACCTTCCCTAGAAATAAGCATCTGGAATGGCTTTaGGACACTGCCTTTAACAAA +
Preference number: 3 (lower is better)
Translates to: IKITGGKHGNRPTFPRNKHLEWL*DTAFNK
Trigger: TTTGTTAAAGGCAGTGTCCAAAAGCCATTCCAGATG...CTTATTTCTAGGGAAGGTAGGTCGGTTTCCATGTTTCCCTCCCGTTATTTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp ACACAACGACAGCAGCCGCCAGACGCGTGCTCGCTCTGGGCCCTGCCCCCAGACCAGCCGCCAGACGCGTaGTCGCTCTGGGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: TQRQQPPDACSLWALPPDQPPDA*SLWALP
Trigger: GGGCAGGGCCCAGAGCGAGCACGCGTCTGGCGGCTG...GTCTGGGGGCAGGGCCCAGAGCGAGCACGCGTCTGGCGGCTGCTGTCGTTGTGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp CCCCACACCCAGGTGCCCATGCCGAGGGCACTTTCTGCCCAGCCAGGGGCTGGCGACGCGTGCTCGCTCTaGGCCCTGCCCCCAGACAGG +
Preference number: 4 (lower is better)
Translates to: PHTQVPMPRALSAQPGAGDACSL*ALPPDR
Trigger: CCTGTCTGGGGGCAGGGCCCAGAGCGAGCACGCGTC...GCCAGCCCCTGGCTGGGCAGAAAGTGCCCTCGGCATGGGCACCTGGGTGTGGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR TCA 90 bp CACGCCACCTGGAATTCCTGGCCCCGAGACCAGAGGCGCGAGCCCTCCTCCTCCGGTCACCGGCCGCCATaGAGCGGGGAGCGAGCACTG +
Preference number: 4 (lower is better)
Translates to: HATWNSWPRDQRREPSSSGHRPP*SGERAL
Trigger: CAGTGCTCGCTCCCCGCTTCATGGCGGCCGGTGACC...GGAGGAGGAGGGCTCGCGCCTCTGGTCTCGGGGCCAGGAATTCCAGGTGGCGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR TCA 90 bp CAACGGTGGCAGGGAGGGTGTGGGGTATGCTCCCCTCCTCCTGGCACCCAGGCCGGTCACCGGCCGCCATaGAGCGGGGAGCGAGCACTG +
Preference number: 4 (lower is better)
Translates to: QRWQGGCGVCSPPPGTQAGHRPP*SGERAL
Trigger: CAGTGCTCGCTCCCCGCTTCATGGCGGCCGGTGACC...GGCCTGGGTGCCAGGAGGAGGGGAGCATACCCCACACCCTCCCTGCCACCGTTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR TCA 90 bp CCACCCCACACCCAGGTGCCCATGCCGAGGGCACTTTCTGCCCAGCCAGGGGCTGGTCACCGGCCGCCATaGAGCGGGGAGCGAGCACTG +
Preference number: 4 (lower is better)
Translates to: PPHTQVPMPRALSAQPGAGHRPP*SGERAL
Trigger: CAGTGCTCGCTCCCCGCTTCATGGCGGCCGGTGACC...AGCCCCTGGCTGGGCAGAAAGTGCCCTCGGCATGGGCACCTGGGTGTGGGGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR GCA 90 bp AACGACAGCAGCCGCCAGACGCGTGCTCGCTCTGGGCCCTGCCCCCAGACAGGGGCCGAGGGCACTTTCTaGCCAGCCAGGGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: NDSSRQTRARSGPCPQTGAEGTF*PARGWQ
Trigger: CTGCCAGCCCCTGGCTGGGCAGAAAGTGCCCTCGGC...CCCTGTCTGGGGGCAGGGCCCAGAGCGAGCACGCGTCTGGCGGCTGCTGTCGTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp CACACCCAGGTGCCCATGCCGAGGGCACTTTCTGCCCAGCCAGGGGCTGGCAGCGACGCGTGCTCGCTCTaGGCCCTGCCCCCAGACAGG +
Preference number: 4 (lower is better)
Translates to: HTQVPMPRALSAQPGAGSDACSL*ALPPDR
Trigger: CCTGTCTGGGGGCAGGGCCCAGAGCGAGCACGCGTC...GCTGCCAGCCCCTGGCTGGGCAGAAAGTGCCCTCGGCATGGGCACCTGGGTGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR TCA 90 bp AACGACAGCAGCCGCCAGACGCGTGCTCGCTCTGGGCCCTGCCCCCAGACAGGGACCAGGCGATGGCCATaGGGCCTCCAGCGATGCCTC +
Preference number: 4 (lower is better)
Translates to: NDSSRQTRARSGPCPQTGTRRWP*GLQRCL
Trigger: GAGGCATCGCTGGAGGCCTCATGGCCATCGCCTGGT...CCCTGTCTGGGGGCAGGGCCCAGAGCGAGCACGCGTCTGGCGGCTGCTGTCGTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372546.9
CDS-3UTR GCA 90 bp CCCCACACCCAGGTGCCCATGCCGAGGGCACTTTCTGCCCAGCCAGGGGCTGGCGGAGGGTGTGGGGTATaGTCCCCTCCTCCTGGCACC +
Preference number: 4 (lower is better)
Translates to: PHTQVPMPRALSAQPGAGGGCGV*SPPPGT
Trigger: GGTGCCAGGAGGAGGGGAGCATACCCCACACCCTCC...GCCAGCCCCTGGCTGGGCAGAAAGTGCCCTCGGCATGGGCACCTGGGTGTGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp AACGACAGCAGCCGCCAGACGCGTGCTCGCTCTGGGCCCTGCCCCCAGACAGGGCCCAGGGAGAGCACGTaGCTCCACAGCAAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: NDSSRQTRARSGPCPQTGPREST*LHSKSR
Trigger: CCTGGACTTGCTGTGGAGGCACGTGCTCTCCCTGGG...CCCTGTCTGGGGGCAGGGCCCAGAGCGAGCACGCGTCTGGCGGCTGCTGTCGTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp CCCCACACCCAGGTGCCCATGCCGAGGGCACTTTCTGCCCAGCCAGGGGCTGGCGCCAGATCTGGAGGCTaGACCCAGCCACACCCACTG +
Preference number: 4 (lower is better)
Translates to: PHTQVPMPRALSAQPGAGARSGG*TQPHPL
Trigger: CAGTGGGTGTGGCTGGGTCCAGCCTCCAGATCTGGC...GCCAGCCCCTGGCTGGGCAGAAAGTGCCCTCGGCATGGGCACCTGGGTGTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR CCA 90 bp CAACGGTGGCAGGGAGGGTGTGGGGTATGCTCCCCTCCTCCTGGCACCCAGGCCCGTGCGGGCCAGATCTaGAGGCTGGACCCAGCCACA +
Preference number: 4 (lower is better)
Translates to: QRWQGGCGVCSPPPGTQARAGQI*RLDPAT
Trigger: TGTGGCTGGGTCCAGCCTCCAGATCTGGCCCGCACG...GGCCTGGGTGCCAGGAGGAGGGGAGCATACCCCACACCCTCCCTGCCACCGTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp TGCAAGGCATCGTGCGGGCCAGATCTGGAGGCTGGACCCAGCCACACCCACTGGGACGCGTGCTCGCTCTaGGCCCTGCCCCCAGACAGG +
Preference number: 4 (lower is better)
Translates to: CKASCGPDLEAGPSHTHWDACSL*ALPPDR
Trigger: CCTGTCTGGGGGCAGGGCCCAGAGCGAGCACGCGTC...CCAGTGGGTGTGGCTGGGTCCAGCCTCCAGATCTGGCCCGCACGATGCCTTGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp ACCCAGGTGCCCATGCCGAGGGCACTTTCTGCCCAGCCAGGGGCTGGCAGCAGCGTACTTGGTGCCCACTaGTGTGTGGGGGCCGTGTGC +
Preference number: 4 (lower is better)
Translates to: TQVPMPRALSAQPGAGSSVLGAH*CVGAVC
Trigger: GCACACGGCCCCCACACAGCAGTGGGCACCAAGTAC...GCTGCTGCCAGCCCCTGGCTGGGCAGAAAGTGCCCTCGGCATGGGCACCTGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327812.12
ENST00000412363.1
CDS-3UTR GCA 90 bp CACCCAGGTGCCCATGCCGAGGGCACTTTCTGCCCAGCCAGGGGCTGGCAGCAGGCATCCCGTACTTGGTaGCCACTGCTGTGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: HPGAHAEGTFCPARGWQQASRTW*PLLCGG
Trigger: GCCCCCACACAGCAGTGGGCACCAAGTACGGGATGC...CTGCTGCCAGCCCCTGGCTGGGCAGAAAGTGCCCTCGGCATGGGCACCTGGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR GCA 90 bp CACACCCAGGTGCCCATGCCGAGGGCACTTTCTGCCCAGCCAGGGGCTGGCAGCCCCAGGGAGAGCACGTaGCTCCACAGCAAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: HTQVPMPRALSAQPGAGSPREST*LHSKSR
Trigger: CCTGGACTTGCTGTGGAGGCACGTGCTCTCCCTGGG...GCTGCCAGCCCCTGGCTGGGCAGAAAGTGCCCTCGGCATGGGCACCTGGGTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp CCTCCACCCCACACCCAGGTGCCCATGCCGAGGGCACTTTCTGCCCAGCCAGGGCAGGGAGAGGCAGTCTaGCCTCTGGGCATAGGGCGA +
Preference number: 4 (lower is better)
Translates to: PPPHTQVPMPRALSAQPGQGEAV*PLGIGR
Trigger: TCGCCCTATGCCCAGAGGGCAGACTGCCTCTCCCTG...CCCTGGCTGGGCAGAAAGTGCCCTCGGCATGGGCACCTGGGTGTGGGGTGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR GCA 90 bp CCTCCACCCCACACCCAGGTGCCCATGCCGAGGGCACTTTCTGCCCAGCCAGGGGCACTGTCCGTCCGCTaGCATCTTACCCGGAGACCG +
Preference number: 4 (lower is better)
Translates to: PPPHTQVPMPRALSAQPGALSVR*HLTRRP
Trigger: CGGTCTCCGGGTAAGATGGCAGCGGACGGACAGTGC...CCCTGGCTGGGCAGAAAGTGCCCTCGGCATGGGCACCTGGGTGTGGGGTGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp CCTCCACCCCACACCCAGGTGCCCATGCCGAGGGCACTTTCTGCCCAGCCAGGGGACCCCCTCGTTCAGTaGCAGGCCCCCAAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: PPPHTQVPMPRALSAQPGDPLVQ*QAPKEG
Trigger: TCCTTCCTTGGGGGCCTGGCACTGAACGAGGGGGTC...CCCTGGCTGGGCAGAAAGTGCCCTCGGCATGGGCACCTGGGTGTGGGGTGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp CACCCAGGTGCCCATGCCGAGGGCACTTTCTGCCCAGCCAGGGGCTGGCAGCAGGCCAGATCTGGAGGCTaGACCCAGCCACACCCACTG +
Preference number: 4 (lower is better)
Translates to: HPGAHAEGTFCPARGWQQARSGG*TQPHPL
Trigger: CAGTGGGTGTGGCTGGGTCCAGCCTCCAGATCTGGC...CTGCTGCCAGCCCCTGGCTGGGCAGAAAGTGCCCTCGGCATGGGCACCTGGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR CCA 90 bp GCCCTGCCCCCAGACAGGGAAACACTGACCGAGGTTCTGGAACGGCAACGGTGGCACAGCGAGGGTCTCTaGCCACGGCCCCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: ALPPDRETLTEVLERQRWHSEGL*PRPPGS
Trigger: GCTGCCTGGGGGCCGTGGCCAGAGACCCTCGCTGTG...CCACCGTTGCCGTTCCAGAACCTCGGTCAGTGTTTCCCTGTCTGGGGGCAGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp TCCTCCACCCCACACCCAGGTGCCCATGCCGAGGGCACTTTCTGCCCAGCCAGGATAGGGCGAAGGGCCTaGGAAGCTGACCGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: SSTPHPGAHAEGTFCPARIGRRA*EADREP
Trigger: GGGCTCCCGGTCAGCTTCCCAGGCCCTTCGCCCTAT...CCTGGCTGGGCAGAAAGTGCCCTCGGCATGGGCACCTGGGTGTGGGGTGGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR GCA 90 bp CGGGGTAGAACACAACGACAGCAGCCGCCAGACGCGTGCTCGCTCTGGGCCCTGGCATCCCGTACTTGGTaGCCACTGCTGTGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: RGRTQRQQPPDACSLWALASRTW*PLLCGG
Trigger: GCCCCCACACAGCAGTGGGCACCAAGTACGGGATGC...CAGGGCCCAGAGCGAGCACGCGTCTGGCGGCTGCTGTCGTTGTGTTCTACCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp CCACCCCACACCCAGGTGCCCATGCCGAGGGCACTTTCTGCCCAGCCAGGGGCTTCCTGCAAGGCATCGTaGGGGCCAGATCTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: PPHTQVPMPRALSAQPGASCKAS*GPDLEA
Trigger: AGCCTCCAGATCTGGCCCGCACGATGCCTTGCAGGA...AGCCCCTGGCTGGGCAGAAAGTGCCCTCGGCATGGGCACCTGGGTGTGGGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR CCA 90 bp ACACAACGACAGCAGCCGCCAGACGCGTGCTCGCTCTGGGCCCTGCCCCCAGACAGGGCATCCCGTACTTaGTGCCCACTGCTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: TQRQQPPDACSLWALPPDRASRT*CPLLCG
Trigger: CCCACACAGCAGTGGGCACCAAGTACGGGATGCCCT...GTCTGGGGGCAGGGCCCAGAGCGAGCACGCGTCTGGCGGCTGCTGTCGTTGTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp CCCCACACCCAGGTGCCCATGCCGAGGGCACTTTCTGCCCAGCCAGGGGCTGGCTGCGTTGTCTGTTCCTaGCTTCTGCCCGGGTTACCG +
Preference number: 4 (lower is better)
Translates to: PHTQVPMPRALSAQPGAGCVVCS*LLPGLP
Trigger: CGGTAACCCGGGCAGAAGCCAGGAACAGACAACGCA...GCCAGCCCCTGGCTGGGCAGAAAGTGCCCTCGGCATGGGCACCTGGGTGTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR CCA 90 bp CACACCCAGGTGCCCATGCCGAGGGCACTTTCTGCCCAGCCAGGGGCTGGCAGCCCCAGCCACACCCACTaGTCACTGCAGTTTCGTCCC +
Preference number: 4 (lower is better)
Translates to: HTQVPMPRALSAQPGAGSPSHTH*SLQFRP
Trigger: GGGACGAAACTGCAGTGACCAGTGGGTGTGGCTGGG...GCTGCCAGCCCCTGGCTGGGCAGAAAGTGCCCTCGGCATGGGCACCTGGGTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR CCA 90 bp ACCCAGGTGCCCATGCCGAGGGCACTTTCTGCCCAGCCAGGGGCTGGCAGCAGCCCCAGCCACACCCACTaGTCACTGCAGTTTCGTCCC +
Preference number: 4 (lower is better)
Translates to: TQVPMPRALSAQPGAGSSPSHTH*SLQFRP
Trigger: GGGACGAAACTGCAGTGACCAGTGGGTGTGGCTGGG...GCTGCTGCCAGCCCCTGGCTGGGCAGAAAGTGCCCTCGGCATGGGCACCTGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR CCA 90 bp TCCTCCACCCCACACCCAGGTGCCCATGCCGAGGGCACTTTCTGCCCAGCCAGGCTGGAACGGCAACGGTaGCAGGGAGGGTGTGGGGTA +
Preference number: 4 (lower is better)
Translates to: SSTPHPGAHAEGTFCPARLERQR*QGGCGV
Trigger: TACCCCACACCCTCCCTGCCACCGTTGCCGTTCCAG...CCTGGCTGGGCAGAAAGTGCCCTCGGCATGGGCACCTGGGTGTGGGGTGGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp AACGACAGCAGCCGCCAGACGCGTGCTCGCTCTGGGCCCTGCCCCCAGACAGGGTCTGTTCCTGGCTTCTaGCCGGGTTACCGTGTACTC +
Preference number: 4 (lower is better)
Translates to: NDSSRQTRARSGPCPQTGSVPGF*PGYRVL
Trigger: GAGTACACGGTAACCCGGGCAGAAGCCAGGAACAGA...CCCTGTCTGGGGGCAGGGCCCAGAGCGAGCACGCGTCTGGCGGCTGCTGTCGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp CACGCCACCTGGAATTCCTGGCCCCGAGACCAGAGGCGCGAGCCCTCCTCCTCCTCATCCTGTCCATCCTaGAAGGCATCGTGCGGGCCA +
Preference number: 4 (lower is better)
Translates to: HATWNSWPRDQRREPSSSSSCPS*KASCGP
Trigger: TGGCCCGCACGATGCCTTGCAGGATGGACAGGATGA...GGAGGAGGAGGGCTCGCGCCTCTGGTCTCGGGGCCAGGAATTCCAGGTGGCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR GCA 90 bp CTGTCCATCCTGCAAGGCATCGTGCGGGCCAGATCTGGAGGCTGGACCCAGCCAGGAGGGTGTGGGGTATaGTCCCCTCCTCCTGGCACC +
Preference number: 4 (lower is better)
Translates to: LSILQGIVRARSGGWTQPGGCGV*SPPPGT
Trigger: GGTGCCAGGAGGAGGGGAGCATACCCCACACCCTCC...TGGCTGGGTCCAGCCTCCAGATCTGGCCCGCACGATGCCTTGCAGGATGGACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp CGGGGTAGAACACAACGACAGCAGCCGCCAGACGCGTGCTCGCTCTGGGCCCTGAGGGCATCCCGTACTTaGTGCCCACTGCTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: RGRTQRQQPPDACSLWALRASRT*CPLLCG
Trigger: CCCACACAGCAGTGGGCACCAAGTACGGGATGCCCT...CAGGGCCCAGAGCGAGCACGCGTCTGGCGGCTGCTGTCGTTGTGTTCTACCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp CCACCCCACACCCAGGTGCCCATGCCGAGGGCACTTTCTGCCCAGCCAGGGGCTTGCGTTGTCTGTTCCTaGCTTCTGCCCGGGTTACCG +
Preference number: 4 (lower is better)
Translates to: PPHTQVPMPRALSAQPGACVVCS*LLPGLP
Trigger: CGGTAACCCGGGCAGAAGCCAGGAACAGACAACGCA...AGCCCCTGGCTGGGCAGAAAGTGCCCTCGGCATGGGCACCTGGGTGTGGGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR CCA 90 bp CCTCCACCCCACACCCAGGTGCCCATGCCGAGGGCACTTTCTGCCCAGCCAGGGTGCGTTGTCTGTTCCTaGCTTCTGCCCGGGTTACCG +
Preference number: 4 (lower is better)
Translates to: PPPHTQVPMPRALSAQPGCVVCS*LLPGLP
Trigger: CGGTAACCCGGGCAGAAGCCAGGAACAGACAACGCA...CCCTGGCTGGGCAGAAAGTGCCCTCGGCATGGGCACCTGGGTGTGGGGTGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR CCA 90 bp TCCTCCACCCCACACCCAGGTGCCCATGCCGAGGGCACTTTCTGCCCAGCCAGGCCCAGCCACACCCACTaGTCACTGCAGTTTCGTCCC +
Preference number: 4 (lower is better)
Translates to: SSTPHPGAHAEGTFCPARPSHTH*SLQFRP
Trigger: GGGACGAAACTGCAGTGACCAGTGGGTGTGGCTGGG...CCTGGCTGGGCAGAAAGTGCCCTCGGCATGGGCACCTGGGTGTGGGGTGGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR TCA 90 bp CCCCACACCCAGGTGCCCATGCCGAGGGCACTTTCTGCCCAGCCAGGGGCTGGCAACTCCCTTTCAGAGTaGCTTAGAGATGGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: PHTQVPMPRALSAQPGAGNSLSE*LRDGGP
Trigger: GGGACCCCCATCTCTAAGTCACTCTGAAAGGGAGTT...GCCAGCCCCTGGCTGGGCAGAAAGTGCCCTCGGCATGGGCACCTGGGTGTGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp CCCCACACCCAGGTGCCCATGCCGAGGGCACTTTCTGCCCAGCCAGGGGCTGGCGCCAGAGAGATCACCTaGAGGATATTCGACGTGGGT +
Preference number: 4 (lower is better)
Translates to: PHTQVPMPRALSAQPGAGAREIT*RIFDVG
Trigger: ACCCACGTCGAATATCCTGCAGGTGATCTCTCTGGC...GCCAGCCCCTGGCTGGGCAGAAAGTGCCCTCGGCATGGGCACCTGGGTGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR GCA 90 bp CACGCCACCTGGAATTCCTGGCCCCGAGACCAGAGGCGCGAGCCCTCCTCCTCCTCTGTTCCTGGCTTCTaGCCGGGTTACCGTGTACTC +
Preference number: 4 (lower is better)
Translates to: HATWNSWPRDQRREPSSSSVPGF*PGYRVL
Trigger: GAGTACACGGTAACCCGGGCAGAAGCCAGGAACAGA...GGAGGAGGAGGGCTCGCGCCTCTGGTCTCGGGGCCAGGAATTCCAGGTGGCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR GCA 90 bp CCTGCAAGGCATCGTGCGGGCCAGATCTGGAGGCTGGACCCAGCCACACCCACTTCCTGCAAGGCATCGTaGGGGCCAGATCTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: PARHRAGQIWRLDPATPTSCKAS*GPDLEA
Trigger: AGCCTCCAGATCTGGCCCGCACGATGCCTTGCAGGA...AGTGGGTGTGGCTGGGTCCAGCCTCCAGATCTGGCCCGCACGATGCCTTGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR GCA 90 bp CTGTCCATCCTGCAAGGCATCGTGCGGGCCAGATCTGGAGGCTGGACCCAGCCACACCCCACACCCAGGTaGCCATGCCGAGGGCACTTT +
Preference number: 4 (lower is better)
Translates to: LSILQGIVRARSGGWTQPHPTPR*PCRGHF
Trigger: AAAGTGCCCTCGGCATGGGCACCTGGGTGTGGGGTG...TGGCTGGGTCCAGCCTCCAGATCTGGCCCGCACGATGCCTTGCAGGATGGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR GCA 90 bp CTGCCCCCAGACAGGGAAACACTGACCGAGGTTCTGGAACGGCAACGGTGGCAGGCTCGCTCTGGGCCCTaGCCCCAGACAGGGAAACAC +
Preference number: 4 (lower is better)
Translates to: LPPDRETLTEVLERQRWQARSGP*PQTGKH
Trigger: GTGTTTCCCTGTCTGGGGGCAGGGCCCAGAGCGAGC...CTGCCACCGTTGCCGTTCCAGAACCTCGGTCAGTGTTTCCCTGTCTGGGGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp CCTGCAAGGCATCGTGCGGGCCAGATCTGGAGGCTGGACCCAGCCACACCCACTAGGGCATCCCGTACTTaGTGCCCACTGCTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: PARHRAGQIWRLDPATPTRASRT*CPLLCG
Trigger: CCCACACAGCAGTGGGCACCAAGTACGGGATGCCCT...AGTGGGTGTGGCTGGGTCCAGCCTCCAGATCTGGCCCGCACGATGCCTTGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR CCA 90 bp ATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCAGATCTGGAGGCTGGACCCAGCGTGCGGGCCAGATCTaGAGGCTGGACCCAGCCACA +
Preference number: 4 (lower is better)
Translates to: ILSILQGIVRARSGGWTQRAGQI*RLDPAT
Trigger: TGTGGCTGGGTCCAGCCTCCAGATCTGGCCCGCACG...CTGGGTCCAGCCTCCAGATCTGGCCCGCACGATGCCTTGCAGGATGGACAGGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR CCA 90 bp CCCCACACCCAGGTGCCCATGCCGAGGGCACTTTCTGCCCAGCCAGGGGCTGGCCTCCACTTGGTGACTTaGGTCTGTAGAGGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: PHTQVPMPRALSAQPGAGLHLVT*VCRGLC
Trigger: GCAGAGACCTCTACAGACCCAAGTCACCAAGTGGAG...GCCAGCCCCTGGCTGGGCAGAAAGTGCCCTCGGCATGGGCACCTGGGTGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR CCA 90 bp TTCAGAGCACACAGAGGGAAGGACGAGGGACTTCGGGTGCCTGTTGCCTCACTCCACAGCGAGGGTCTCTaGCCACGGCCCCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: FRAHRGKDEGLRVPVASLHSEGL*PRPPGS
Trigger: GCTGCCTGGGGGCCGTGGCCAGAGACCCTCGCTGTG...GAGTGAGGCAACAGGCACCCGAAGTCCCTCGTCCTTCCCTCTGTGTGCTCTGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp TCGTCCCTGTCTGTCATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCAGATCTCACAGCGAGGGTCTCTaGCCACGGCCCCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: SSLSVILSILQGIVRARSHSEGL*PRPPGS
Trigger: GCTGCCTGGGGGCCGTGGCCAGAGACCCTCGCTGTG...AGATCTGGCCCGCACGATGCCTTGCAGGATGGACAGGATGACAGACAGGGACGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR CCA 90 bp CATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCAGATCTGGAGGCTGGACCCAGCCACCTGGAATTCCTaGCCCCGAGACCAGAGGCGC +
Preference number: 4 (lower is better)
Translates to: HPVHPARHRAGQIWRLDPATWNS*PRDQRR
Trigger: GCGCCTCTGGTCTCGGGGCCAGGAATTCCAGGTGGC...TGGGTCCAGCCTCCAGATCTGGCCCGCACGATGCCTTGCAGGATGGACAGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR CCA 90 bp CGGGGTAGAACACAACGACAGCAGCCGCCAGACGCGTGCTCGCTCTGGGCCCTGACTTCTCACGCCACCTaGAATTCCTGGCCCCGAGAC +
Preference number: 4 (lower is better)
Translates to: RGRTQRQQPPDACSLWALTSHAT*NSWPRD
Trigger: GTCTCGGGGCCAGGAATTCCAGGTGGCGTGAGAAGT...CAGGGCCCAGAGCGAGCACGCGTCTGGCGGCTGCTGTCGTTGTGTTCTACCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp CATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCAGATCTGGAGGCTGGACCCAATAGGGCGAAGGGCCTaGGAAGCTGACCGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: HPVHPARHRAGQIWRLDPIGRRA*EADREP
Trigger: GGGCTCCCGGTCAGCTTCCCAGGCCCTTCGCCCTAT...TGGGTCCAGCCTCCAGATCTGGCCCGCACGATGCCTTGCAGGATGGACAGGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR TCA 90 bp CACTGGTCACTGCAGTTTCGTCCCCAGCTTGCGTTGTCTGTTCCTGGCTTCTGCGGTCACCGGCCGCCATaGAGCGGGGAGCGAGCACTG +
Preference number: 4 (lower is better)
Translates to: HWSLQFRPQLALSVPGFCGHRPP*SGERAL
Trigger: CAGTGCTCGCTCCCCGCTTCATGGCGGCCGGTGACC...GCAGAAGCCAGGAACAGACAACGCAAGCTGGGGACGAAACTGCAGTGACCAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327812.12
ENST00000412363.1
CDS-3UTR TCA 90 bp ATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCAGATCTGGAGGCTGGACCCAGGATATTCGACGTGGGTaGGGGTCACCGGCCGCCATG +
Preference number: 4 (lower is better)
Translates to: ILSILQGIVRARSGGWTQDIRRG*GSPAAM
Trigger: CATGGCGGCCGGTGACCCTCACCCACGTCGAATATC...CTGGGTCCAGCCTCCAGATCTGGCCCGCACGATGCCTTGCAGGATGGACAGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR TCA 90 bp ACCCAGGTGCCCATGCCGAGGGCACTTTCTGCCCAGCCAGGGGCTGGCAGCAGCAAAGGCTCCACTTGGTaGCTTGGGTCTGTAGAGGTC +
Preference number: 4 (lower is better)
Translates to: TQVPMPRALSAQPGAGSSKGSTW*LGSVEV
Trigger: GACCTCTACAGACCCAAGTCACCAAGTGGAGCCTTT...GCTGCTGCCAGCCCCTGGCTGGGCAGAAAGTGCCCTCGGCATGGGCACCTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR TCA 90 bp CCTGCAAGGCATCGTGCGGGCCAGATCTGGAGGCTGGACCCAGCCACACCCACTGCTGATAGGGATCTGTaGGCCCACACCCCAGACACA +
Preference number: 4 (lower is better)
Translates to: PARHRAGQIWRLDPATPTADRDL*AHTPDT
Trigger: TGTGTCTGGGGTGTGGGCTCACAGATCCCTATCAGC...AGTGGGTGTGGCTGGGTCCAGCCTCCAGATCTGGCCCGCACGATGCCTTGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp CGGGGTAGAACACAACGACAGCAGCCGCCAGACGCGTGCTCGCTCTGGGCCCTGACACCCACTGGTCACTaGAGTTTCGTCCCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: RGRTQRQQPPDACSLWALTPTGH*SFVPSL
Trigger: CAAGCTGGGGACGAAACTGCAGTGACCAGTGGGTGT...CAGGGCCCAGAGCGAGCACGCGTCTGGCGGCTGCTGTCGTTGTGTTCTACCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp ATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCAGATCTGGAGGCTGGACCCAGCAGGGAGAGGCAGTCTaGCCTCTGGGCATAGGGCGA +
Preference number: 4 (lower is better)
Translates to: ILSILQGIVRARSGGWTQQGEAV*PLGIGR
Trigger: TCGCCCTATGCCCAGAGGGCAGACTGCCTCTCCCTG...CTGGGTCCAGCCTCCAGATCTGGCCCGCACGATGCCTTGCAGGATGGACAGGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR CCA 90 bp CACCCAGGTGCCCATGCCGAGGGCACTTTCTGCCCAGCCAGGGGCTGGCAGCAGCACATAAACTGGGAATaGCTGGAGGGCATCCCGTAC +
Preference number: 4 (lower is better)
Translates to: HPGAHAEGTFCPARGWQQHINWE*LEGIPY
Trigger: GTACGGGATGCCCTCCAGCCATTCCCAGTTTATGTG...CTGCTGCCAGCCCCTGGCTGGGCAGAAAGTGCCCTCGGCATGGGCACCTGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR CCA 90 bp CATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCAGATCTGGAGGCTGGACCCAGCCAGATCTGGAGGCTaGACCCAGCCACACCCACTG +
Preference number: 4 (lower is better)
Translates to: HPVHPARHRAGQIWRLDPARSGG*TQPHPL
Trigger: CAGTGGGTGTGGCTGGGTCCAGCCTCCAGATCTGGC...TGGGTCCAGCCTCCAGATCTGGCCCGCACGATGCCTTGCAGGATGGACAGGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR CCA 90 bp ATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCAGATCTGGAGGCTGGACCCAGCTGGAACGGCAACGGTaGCAGGGAGGGTGTGGGGTA +
Preference number: 4 (lower is better)
Translates to: ILSILQGIVRARSGGWTQLERQR*QGGCGV
Trigger: TACCCCACACCCTCCCTGCCACCGTTGCCGTTCCAG...CTGGGTCCAGCCTCCAGATCTGGCCCGCACGATGCCTTGCAGGATGGACAGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp AACGACAGCAGCCGCCAGACGCGTGCTCGCTCTGGGCCCTGCCCCCAGACAGGGAAACTTCTGAGAGTCTaGAGGCGTCTCCTCTCCACA +
Preference number: 4 (lower is better)
Translates to: NDSSRQTRARSGPCPQTGKLLRV*RRLLST
Trigger: TGTGGAGAGGAGACGCCTCCAGACTCTCAGAAGTTT...CCCTGTCTGGGGGCAGGGCCCAGAGCGAGCACGCGTCTGGCGGCTGCTGTCGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp CAACGGTGGCAGGGAGGGTGTGGGGTATGCTCCCCTCCTCCTGGCACCCAGGCCAACGGGAGGGAAACATaGAAACCGACCTACCTTCCC +
Preference number: 4 (lower is better)
Translates to: QRWQGGCGVCSPPPGTQANGRET*KPTYLP
Trigger: GGGAAGGTAGGTCGGTTTCCATGTTTCCCTCCCGTT...GGCCTGGGTGCCAGGAGGAGGGGAGCATACCCCACACCCTCCCTGCCACCGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR TCA 90 bp GGAAGGACGAGGGACTTCGGGTGCCTGTTGCCTCACTCCTCTCCTCACGGCTCCCAGACAGGGAAACACTaGCCGAGGTTCTGGAACGGC +
Preference number: 4 (lower is better)
Translates to: GRTRDFGCLLPHSSPHGSQTGKH*PRFWNG
Trigger: GCCGTTCCAGAACCTCGGTCAGTGTTTCCCTGTCTG...GGAGCCGTGAGGAGAGGAGTGAGGCAACAGGCACCCGAAGTCCCTCGTCCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR TCA 90 bp ACCCAGGTGCCCATGCCGAGGGCACTTTCTGCCCAGCCAGGGGCTGGCAGCAGCAACACAGATCCCGAGTaGCCCAGTTCAGTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: TQVPMPRALSAQPGAGSSNTDPE*PSSVLK
Trigger: TTTGAGGACTGAACTGGGTCACTCGGGATCTGTGTT...GCTGCTGCCAGCCCCTGGCTGGGCAGAAAGTGCCCTCGGCATGGGCACCTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp TCCTCCACCCCACACCCAGGTGCCCATGCCGAGGGCACTTTCTGCCCAGCCAGGGCCAGAGAGATCACCTaGAGGATATTCGACGTGGGT +
Preference number: 4 (lower is better)
Translates to: SSTPHPGAHAEGTFCPARAREIT*RIFDVG
Trigger: ACCCACGTCGAATATCCTGCAGGTGATCTCTCTGGC...CCTGGCTGGGCAGAAAGTGCCCTCGGCATGGGCACCTGGGTGTGGGGTGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR GCA 90 bp TGCTTCGTCCCTGTCTGTCATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCAGACACCCAGGTGCCCATaGCGAGGGCACTTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: CFVPVCHPVHPARHRAGQTPRCP*RGHFLP
Trigger: GGGCAGAAAGTGCCCTCGGCATGGGCACCTGGGTGT...CTGGCCCGCACGATGCCTTGCAGGATGGACAGGATGACAGACAGGGACGAAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR GCA 90 bp TCTGCTTCGTCCCTGTCTGTCATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCCAGGGAGAGGCAGTCTaGCCTCTGGGCATAGGGCGA +
Preference number: 4 (lower is better)
Translates to: SASSLSVILSILQGIVRAQGEAV*PLGIGR
Trigger: TCGCCCTATGCCCAGAGGGCAGACTGCCTCTCCCTG...GGCCCGCACGATGCCTTGCAGGATGGACAGGATGACAGACAGGGACGAAGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR GCA 90 bp TGCTTCGTCCCTGTCTGTCATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCAGGCACTGTCCGTCCGCTaGCATCTTACCCGGAGACCG +
Preference number: 4 (lower is better)
Translates to: CFVPVCHPVHPARHRAGQALSVR*HLTRRP
Trigger: CGGTCTCCGGGTAAGATGGCAGCGGACGGACAGTGC...CTGGCCCGCACGATGCCTTGCAGGATGGACAGGATGACAGACAGGGACGAAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp CATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCAGATCTGGAGGCTGGACCCAGTACTTGGTGCCCACTaGTGTGTGGGGGCCTCCACA +
Preference number: 4 (lower is better)
Translates to: HPVHPARHRAGQIWRLDPVLGAH*CVGAST
Trigger: TGTGGAGGCCCCCACACAGCAGTGGGCACCAAGTAC...TGGGTCCAGCCTCCAGATCTGGCCCGCACGATGCCTTGCAGGATGGACAGGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp ACTGACCGAGGTTCTGGAACGGCAACGGTGGCAGGGAGGGTGTGGGGTATGCTCGTACTTGGTGCCCACTaGTGTGTGGGGGCCTCCACA +
Preference number: 4 (lower is better)
Translates to: TDRGSGTATVAGRVWGMLVLGAH*CVGAST
Trigger: TGTGGAGGCCCCCACACAGCAGTGGGCACCAAGTAC...GAGCATACCCCACACCCTCCCTGCCACCGTTGCCGTTCCAGAACCTCGGTCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp TGCTTCGTCCCTGTCTGTCATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCAGGCAGGATATTCGACGTaGGTGAGGGTCACCGGCCGC +
Preference number: 4 (lower is better)
Translates to: CFVPVCHPVHPARHRAGQAGYST*VRVTGR
Trigger: GCGGCCGGTGACCCTCACCCACGTCGAATATCCTGC...CTGGCCCGCACGATGCCTTGCAGGATGGACAGGATGACAGACAGGGACGAAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR CCA 90 bp TCCCTGTCTGTCATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCAGATCTGGACGTGCGGGCCAGATCTaGAGGCTGGACCCAGCCACA +
Preference number: 4 (lower is better)
Translates to: SLSVILSILQGIVRARSGRAGQI*RLDPAT
Trigger: TGTGGCTGGGTCCAGCCTCCAGATCTGGCCCGCACG...TCCAGATCTGGCCCGCACGATGCCTTGCAGGATGGACAGGATGACAGACAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR CCA 90 bp CGGGGTAGAACACAACGACAGCAGCCGCCAGACGCGTGCTCGCTCTGGGCCCTGAAGCAGGTTCCCAGCTaGTCAGAGATGGGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: RGRTQRQQPPDACSLWALKQVPS*SEMGQE
Trigger: TTCCTGACCCATCTCTGACCAGCTGGGAACCTGCTT...CAGGGCCCAGAGCGAGCACGCGTCTGGCGGCTGCTGTCGTTGTGTTCTACCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp CACACCCAGGTGCCCATGCCGAGGGCACTTTCTGCCCAGCCAGGGGCTGGCAGCCCACAAAGAAAGGGGTaGGGAGGATTCGAACACAGA +
Preference number: 4 (lower is better)
Translates to: HTQVPMPRALSAQPGAGSPQRKG*GGFEHR
Trigger: TCTGTGTTCGAATCCTCCCCACCCCTTTCTTTGTGG...GCTGCCAGCCCCTGGCTGGGCAGAAAGTGCCCTCGGCATGGGCACCTGGGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp CGGGGTAGAACACAACGACAGCAGCCGCCAGACGCGTGCTCGCTCTGGGCCCTGAACGGGAGGGAAACATaGAAACCGACCTACCTTCCC +
Preference number: 4 (lower is better)
Translates to: RGRTQRQQPPDACSLWALNGRET*KPTYLP
Trigger: GGGAAGGTAGGTCGGTTTCCATGTTTCCCTCCCGTT...CAGGGCCCAGAGCGAGCACGCGTCTGGCGGCTGCTGTCGTTGTGTTCTACCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp CTGTCCATCCTGCAAGGCATCGTGCGGGCCAGATCTGGAGGCTGGACCCAGCCAGCCTCCACAGGGCCGTaGCTCCTGGATGACGTTTTT +
Preference number: 4 (lower is better)
Translates to: LSILQGIVRARSGGWTQPASTGP*LLDDVF
Trigger: AAAAACGTCATCCAGGAGCCACGGCCCTGTGGAGGC...TGGCTGGGTCCAGCCTCCAGATCTGGCCCGCACGATGCCTTGCAGGATGGACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp GGAAGGACGAGGGACTTCGGGTGCCTGTTGCCTCACTCCTCTCCTCACGGCTCCGCCTCCACAGGGCCGTaGCTCCTGGATGACGTTTTT +
Preference number: 4 (lower is better)
Translates to: GRTRDFGCLLPHSSPHGSASTGP*LLDDVF
Trigger: AAAAACGTCATCCAGGAGCCACGGCCCTGTGGAGGC...GGAGCCGTGAGGAGAGGAGTGAGGCAACAGGCACCCGAAGTCCCTCGTCCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp ACTGACCGAGGTTCTGGAACGGCAACGGTGGCAGGGAGGGTGTGGGGTATGCTCTCATCCTGTCCATCCTaGAAGGCATCGTGCGGGCCA +
Preference number: 4 (lower is better)
Translates to: TDRGSGTATVAGRVWGMLSSCPS*KASCGP
Trigger: TGGCCCGCACGATGCCTTGCAGGATGGACAGGATGA...GAGCATACCCCACACCCTCCCTGCCACCGTTGCCGTTCCAGAACCTCGGTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp TCGTCCCTGTCTGTCATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCAGATCTACACCCAGGTGCCCATaGCGAGGGCACTTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: SSLSVILSILQGIVRARSTPRCP*RGHFLP
Trigger: GGGCAGAAAGTGCCCTCGGCATGGGCACCTGGGTGT...AGATCTGGCCCGCACGATGCCTTGCAGGATGGACAGGATGACAGACAGGGACGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR GCA 90 bp TCCCTGTCTGTCATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCAGATCTGGACACCCCACACCCAGGTaGCCATGCCGAGGGCACTTT +
Preference number: 4 (lower is better)
Translates to: SLSVILSILQGIVRARSGHPTPR*PCRGHF
Trigger: AAAGTGCCCTCGGCATGGGCACCTGGGTGTGGGGTG...TCCAGATCTGGCCCGCACGATGCCTTGCAGGATGGACAGGATGACAGACAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR GCA 90 bp CTGCCCCCAGACAGGGAAACACTGACCGAGGTTCTGGAACGGCAACGGTGGCAGACGAGGGACTTCGGGTaGCTGTTGCCTCACTCCTCT +
Preference number: 4 (lower is better)
Translates to: LPPDRETLTEVLERQRWQTRDFG*LLPHSS
Trigger: AGAGGAGTGAGGCAACAGGCACCCGAAGTCCCTCGT...CTGCCACCGTTGCCGTTCCAGAACCTCGGTCAGTGTTTCCCTGTCTGGGGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp AACGACAGCAGCCGCCAGACGCGTGCTCGCTCTGGGCCCTGCCCCCAGACAGGGAGCACCAAAACATTGTaGTTCAGCAGCAGGTTAGGA +
Preference number: 4 (lower is better)
Translates to: NDSSRQTRARSGPCPQTGSTKTL*FSSRLG
Trigger: TCCTAACCTGCTGCTGAAGCACAATGTTTTGGTGCT...CCCTGTCTGGGGGCAGGGCCCAGAGCGAGCACGCGTCTGGCGGCTGCTGTCGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp TGTCTGTCATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCAGATCTGGAGGCTGACCCCCTCGTTCAGTaGCAGGCCCCCAAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: CLSSCPSCKASCGPDLEADPLVQ*QAPKEG
Trigger: TCCTTCCTTGGGGGCCTGGCACTGAACGAGGGGGTC...AGCCTCCAGATCTGGCCCGCACGATGCCTTGCAGGATGGACAGGATGACAGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp TCCCTGTCTGTCATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCAGATCTGGAGCAGGATATTCGACGTaGGTGAGGGTCACCGGCCGC +
Preference number: 4 (lower is better)
Translates to: SLSVILSILQGIVRARSGAGYST*VRVTGR
Trigger: GCGGCCGGTGACCCTCACCCACGTCGAATATCCTGC...TCCAGATCTGGCCCGCACGATGCCTTGCAGGATGGACAGGATGACAGACAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR CCA 90 bp CCTCCACCCCACACCCAGGTGCCCATGCCGAGGGCACTTTCTGCCCAGCCAGGGAAGAACCACATAAACTaGGAATGGCTGGAGGGCATC +
Preference number: 4 (lower is better)
Translates to: PPPHTQVPMPRALSAQPGKNHIN*EWLEGI
Trigger: GATGCCCTCCAGCCATTCCCAGTTTATGTGGTTCTT...CCCTGGCTGGGCAGAAAGTGCCCTCGGCATGGGCACCTGGGTGTGGGGTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR CCA 90 bp CATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCAGATCTGGAGGCTGGACCCATCCTGGTTGAGGGGCTaGTTCAGCCCTTTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: HPVHPARHRAGQIWRLDPSWLRG*FSPLVH
Trigger: GTGGACCAAAGGGCTGAACCAGCCCCTCAACCAGGA...TGGGTCCAGCCTCCAGATCTGGCCCGCACGATGCCTTGCAGGATGGACAGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR CCA 90 bp CATATTCAGAGCACACAGAGGGAAGGACGAGGGACTTCGGGTGCCTGTTGCCTCGCCACCTGGAATTCCTaGCCCCGAGACCAGAGGCGC +
Preference number: 4 (lower is better)
Translates to: HIQSTQREGRGTSGACCLATWNS*PRDQRR
Trigger: GCGCCTCTGGTCTCGGGGCCAGGAATTCCAGGTGGC...GAGGCAACAGGCACCCGAAGTCCCTCGTCCTTCCCTCTGTGTGCTCTGAATATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp CTGTCCATCCTGCAAGGCATCGTGCGGGCCAGATCTGGAGGCTGGACCCAGCCACAGGGCCGTGGCTCCTaGATGACGTTTTTGATCAGC +
Preference number: 4 (lower is better)
Translates to: LSILQGIVRARSGGWTQPQGRGS*MTFLIS
Trigger: GCTGATCAAAAACGTCATCCAGGAGCCACGGCCCTG...TGGCTGGGTCCAGCCTCCAGATCTGGCCCGCACGATGCCTTGCAGGATGGACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372546.9
ENST00000406974.7
3UTR CAA 72 bp GCCACACCCACTGGTCACTGCAGTTTCGTCCCCAGCTaGCGTTGTCTGTTCCTGGCTTCTGCCCGGGTTACC +
Preference number: 4 (lower is better)
Translates to: ATPTGHCSFVPS*RCLFLASARVT
Trigger: GGTAACCCGGGCAGAAGCCAGGAACAGACAACGCAAGCTGGGGACGAAACTGCAGTGACCAGTGGGTGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327812.12
ENST00000412363.1
CDS-3UTR TCA 90 bp TCAGAGCACACAGAGGGAAGGACGAGGGACTTCGGGTGCCTGTTGCCTCACTCCGCTGATAGGGATCTGTaGGCCCACACCCCAGACACA +
Preference number: 4 (lower is better)
Translates to: SEHTEGRTRDFGCLLPHSADRDL*AHTPDT
Trigger: TGTGTCTGGGGTGTGGGCTCACAGATCCCTATCAGC...GGAGTGAGGCAACAGGCACCCGAAGTCCCTCGTCCTTCCCTCTGTGTGCTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR TCA 90 bp TGCTTCGTCCCTGTCTGTCATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCAGGCTGATAGGGATCTGTaGGCCCACACCCCAGACACA +
Preference number: 4 (lower is better)
Translates to: CFVPVCHPVHPARHRAGQADRDL*AHTPDT
Trigger: TGTGTCTGGGGTGTGGGCTCACAGATCCCTATCAGC...CTGGCCCGCACGATGCCTTGCAGGATGGACAGGATGACAGACAGGGACGAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp CTGCTTCGTCCCTGTCTGTCATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCATCATCCTGTCCATCCTaGAAGGCATCGTGCGGGCCA +
Preference number: 4 (lower is better)
Translates to: LLRPCLSSCPSCKASCGPSSCPS*KASCGP
Trigger: TGGCCCGCACGATGCCTTGCAGGATGGACAGGATGA...TGGCCCGCACGATGCCTTGCAGGATGGACAGGATGACAGACAGGGACGAAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR GCA 90 bp TTCCTGGCTTCTGCCCGGGTTACCGTGTACTCAAACCAGAGTACGTTGGGAATGGCCGAGGGCACTTTCTaGCCAGCCAGGGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: FLASARVTVYSNQSTLGMAEGTF*PARGWQ
Trigger: CTGCCAGCCCCTGGCTGGGCAGAAAGTGCCCTCGGC...CATTCCCAACGTACTCTGGTTTGAGTACACGGTAACCCGGGCAGAAGCCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327812.12
ENST00000412363.1
CDS-3UTR GCA 90 bp CATATTCAGAGCACACAGAGGGAAGGACGAGGGACTTCGGGTGCCTGTTGCCTCCACCCCACACCCAGGTaGCCATGCCGAGGGCACTTT +
Preference number: 4 (lower is better)
Translates to: HIQSTQREGRGTSGACCLHPTPR*PCRGHF
Trigger: AAAGTGCCCTCGGCATGGGCACCTGGGTGTGGGGTG...GAGGCAACAGGCACCCGAAGTCCCTCGTCCTTCCCTCTGTGTGCTCTGAATATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp CTGGATGGCAGGACAAGAAAGAGCTGTAAACAGCTTGGGTCTGCTCACCCAAATCAGCCGCCAGACGCGTaGTCGCTCTGGGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: LDGRTRKSCKQLGSAHPNQPPDA*SLWALP
Trigger: GGGCAGGGCCCAGAGCGAGCACGCGTCTGGCGGCTG...ATTTGGGTGAGCAGACCCAAGCTGTTTACAGCTCTTTCTTGTCCTGCCATCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp CATATTCAGAGCACACAGAGGGAAGGACGAGGGACTTCGGGTGCCTGTTGCCTCGCAGGATATTCGACGTaGGTGAGGGTCACCGGCCGC +
Preference number: 4 (lower is better)
Translates to: HIQSTQREGRGTSGACCLAGYST*VRVTGR
Trigger: GCGGCCGGTGACCCTCACCCACGTCGAATATCCTGC...GAGGCAACAGGCACCCGAAGTCCCTCGTCCTTCCCTCTGTGTGCTCTGAATATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp TCCCTGTCTGTCATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCAGATCTGGAAGGGCATCCCGTACTTaGTGCCCACTGCTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: SLSVILSILQGIVRARSGRASRT*CPLLCG
Trigger: CCCACACAGCAGTGGGCACCAAGTACGGGATGCCCT...TCCAGATCTGGCCCGCACGATGCCTTGCAGGATGGACAGGATGACAGACAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR CCA 90 bp TGCAAGGCATCGTGCGGGCCAGATCTGGAGGCTGGACCCAGCCACACCCACTGGGCAAGTCCAGGAACCTaGCGTTGTTTGTTTGGTGCA +
Preference number: 4 (lower is better)
Translates to: CKASCGPDLEAGPSHTHWASPGT*RCLFGA
Trigger: TGCACCAAACAAACAACGCCAGGTTCCTGGACTTGC...CCAGTGGGTGTGGCTGGGTCCAGCCTCCAGATCTGGCCCGCACGATGCCTTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp CCCAGCTTGCGTTGTCTGTTCCTGGCTTCTGCCCGGGTTACCGTGTACTCAAACCTGGAACGGCAACGGTaGCAGGGAGGGTGTGGGGTA +
Preference number: 4 (lower is better)
Translates to: PSLRCLFLASARVTVYSNLERQR*QGGCGV
Trigger: TACCCCACACCCTCCCTGCCACCGTTGCCGTTCCAG...GTTTGAGTACACGGTAACCCGGGCAGAAGCCAGGAACAGACAACGCAAGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327812.12
CDS-3UTR CCA 90 bp GGAAGGACGAGGGACTTCGGGTGCCTGTTGCCTCACTCCTCTCCTCACGGCTCCAAGCAGGTTCCCAGCTaGTCAGAGATGGGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: GRTRDFGCLLPHSSPHGSKQVPS*SEMGQE
Trigger: TTCCTGACCCATCTCTGACCAGCTGGGAACCTGCTT...GGAGCCGTGAGGAGAGGAGTGAGGCAACAGGCACCCGAAGTCCCTCGTCCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp CCTGCAAGGCATCGTGCGGGCCAGATCTGGAGGCTGGACCCAGCCACACCCACTCCACAAAGAAAGGGGTaGGGAGGATTCGAACACAGA +
Preference number: 4 (lower is better)
Translates to: PARHRAGQIWRLDPATPTPQRKG*GGFEHR
Trigger: TCTGTGTTCGAATCCTCCCCACCCCTTTCTTTGTGG...AGTGGGTGTGGCTGGGTCCAGCCTCCAGATCTGGCCCGCACGATGCCTTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp TGCAAGGCATCGTGCGGGCCAGATCTGGAGGCTGGACCCAGCCACACCCACTGGCCTGGTCTTGGCATCTaGAATGGCTTTTGGACACTG +
Preference number: 4 (lower is better)
Translates to: CKASCGPDLEAGPSHTHWPGLGI*NGFWTL
Trigger: CAGTGTCCAAAAGCCATTCCAGATGCCAAGACCAGG...CCAGTGGGTGTGGCTGGGTCCAGCCTCCAGATCTGGCCCGCACGATGCCTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp CGGGGTAGAACACAACGACAGCAGCCGCCAGACGCGTGCTCGCTCTGGGCCCTGCTAGAAATAAGCCCCTaGTCTTGGCATCTGGAATGG +
Preference number: 4 (lower is better)
Translates to: RGRTQRQQPPDACSLWALLEISP*SWHLEW
Trigger: CCATTCCAGATGCCAAGACCAGGGGCTTATTTCTAG...CAGGGCCCAGAGCGAGCACGCGTCTGGCGGCTGCTGTCGTTGTGTTCTACCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR TCA 90 bp TGTCTGTCATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCAGATCTGGAGGCTCAGACAGGGAAACACTaGCCGAGGTTCTGGAACGGC +
Preference number: 4 (lower is better)
Translates to: CLSSCPSCKASCGPDLEAQTGKH*PRFWNG
Trigger: GCCGTTCCAGAACCTCGGTCAGTGTTTCCCTGTCTG...AGCCTCCAGATCTGGCCCGCACGATGCCTTGCAGGATGGACAGGATGACAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp TCTGCTTCGTCCCTGTCTGTCATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCTGTGTGGGGGCCGTGTaGAGCTCCCGCTTAAATATG +
Preference number: 4 (lower is better)
Translates to: SASSLSVILSILQGIVRACVGAV*SSRLNM
Trigger: CATATTTAAGCGGGAGCTGCACACGGCCCCCACACA...GGCCCGCACGATGCCTTGCAGGATGGACAGGATGACAGACAGGGACGAAGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327812.12
ENST00000412363.1
CDS-3UTR GCA 90 bp GGGTCTGTAGAGGTCTCTGCTTCGTCCCTGTCTGTCATCCTGTCCATCCTGCAAGCATCCCGTACTTGGTaGCCACTGCTGTGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: GSVEVSASSLSVILSILQASRTW*PLLCGG
Trigger: GCCCCCACACAGCAGTGGGCACCAAGTACGGGATGC...TTGCAGGATGGACAGGATGACAGACAGGGACGAAGCAGAGACCTCTACAGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR GCA 90 bp TCAGAGCACACAGAGGGAAGGACGAGGGACTTCGGGTGCCTGTTGCCTCACTCCACTCGGAGACAGGCCTaGTGTAGGAGACTAGGAAGG +
Preference number: 4 (lower is better)
Translates to: SEHTEGRTRDFGCLLPHSTRRQA*CRRLGR
Trigger: CCTTCCTAGTCTCCTACAGCAGGCCTGTCTCCGAGT...GGAGTGAGGCAACAGGCACCCGAAGTCCCTCGTCCTTCCCTCTGTGTGCTCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327812.12
ENST00000406974.7
CDS-3UTR GCA 90 bp GGAAGGACGAGGGACTTCGGGTGCCTGTTGCCTCACTCCTCTCCTCACGGCTCCGTCTGTAGAGGTCTCTaGTTCGTCCCTGTCTGTCAT +
Preference number: 4 (lower is better)
Translates to: GRTRDFGCLLPHSSPHGSVCRGL*FVPVCH
Trigger: ATGACAGACAGGGACGAAGCAGAGACCTCTACAGAC...GGAGCCGTGAGGAGAGGAGTGAGGCAACAGGCACCCGAAGTCCCTCGTCCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp ATTCGAACACAGATCCCGAGTGACCCAGTTCAGTCCTCAAAACTTCTGAGAGTCCAGCCGCCAGACGCGTaGTCGCTCTGGGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: IRTQIPSDPVQSSKLLRVQPPDA*SLWALP
Trigger: GGGCAGGGCCCAGAGCGAGCACGCGTCTGGCGGCTG...GACTCTCAGAAGTTTTGAGGACTGAACTGGGTCACTCGGGATCTGTGTTCGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp GGTCTCTGCTTCGTCCCTGTCTGTCATCCTGTCCATCCTGCAAGGCATCGTGCGACTTCGGGTGCCTGTTaGCTCACTCCTCTCCTCACG +
Preference number: 4 (lower is better)
Translates to: GLCFVPVCHPVHPARHRATSGAC*LTPLLT
Trigger: CGTGAGGAGAGGAGTGAGGCAACAGGCACCCGAAGT...CGCACGATGCCTTGCAGGATGGACAGGATGACAGACAGGGACGAAGCAGAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp TGTTGCCTCACTCCTCTCCTCACGGCTCCTTCCCATTTTGTTCACGTGGGGATGGGAGACAGGCCAGGCTaGTATCCTGGGGAACAGCGG +
Preference number: 4 (lower is better)
Translates to: CCLTPLLTAPSHFVHVGMGDRPG*YPGEQR
Trigger: CCGCTGTTCCCCAGGATAGCAGCCTGGCCTGTCTCC...CATCCCCACGTGAACAAAATGGGAAGGAGCCGTGAGGAGAGGAGTGAGGCAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372546.9
CDS-3UTR CCA 90 bp GTGGGGAGGATTCGAACACAGATCCCGAGTGACCCAGTTCAGTCCTCAAAACTTGTGCCCACTGCTGTGTaGGGGCCGTGTGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: VGRIRTQIPSDPVQSSKLVPTAV*GPCAAP
Trigger: GGGAGCTGCACACGGCCCCCACACAGCAGTGGGCAC...AAGTTTTGAGGACTGAACTGGGTCACTCGGGATCTGTGTTCGAATCCTCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327812.12
CDS-3UTR CCA 90 bp CCCCACACCCAGGTGCCCATGCCGAGGGCACTTTCTGCCCAGCCAGGGGCTGGCCTGGCGTTGTTTGTTTaGTGCATTCTTAAATACAGG +
Preference number: 4 (lower is better)
Translates to: PHTQVPMPRALSAQPGAGLALFV*CILKYR
Trigger: CCTGTATTTAAGAATGCACCAAACAAACAACGCCAG...GCCAGCCCCTGGCTGGGCAGAAAGTGCCCTCGGCATGGGCACCTGGGTGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp CTTGTGGTGTTGGGTCAGTACGGGGTAGAACACAACGACAGCAGCCGCCAGACGTCCTGGTTGAGGGGCTaGTTCAGCCCTTTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: LVVLGQYGVEHNDSSRQTSWLRG*FSPLVH
Trigger: GTGGACCAAAGGGCTGAACCAGCCCCTCAACCAGGA...CGTCTGGCGGCTGCTGTCGTTGTGTTCTACCCCGTACTGACCCAACACCACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp TTCCTGGCTTCTGCCCGGGTTACCGTGTACTCAAACCAGAGTACGTTGGGAATGATAGGGCGAAGGGCCTaGGAAGCTGACCGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: FLASARVTVYSNQSTLGMIGRRA*EADREP
Trigger: GGGCTCCCGGTCAGCTTCCCAGGCCCTTCGCCCTAT...CATTCCCAACGTACTCTGGTTTGAGTACACGGTAACCCGGGCAGAAGCCAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327812.12
ENST00000412363.1
CDS-3UTR CCA 90 bp ACTGACCGAGGTTCTGGAACGGCAACGGTGGCAGGGAGGGTGTGGGGTATGCTCAACGGGAGGGAAACATaGAAACCGACCTACCTTCCC +
Preference number: 4 (lower is better)
Translates to: TDRGSGTATVAGRVWGMLNGRET*KPTYLP
Trigger: GGGAAGGTAGGTCGGTTTCCATGTTTCCCTCCCGTT...GAGCATACCCCACACCCTCCCTGCCACCGTTGCCGTTCCAGAACCTCGGTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR TCA 90 bp CTGCTTCGTCCCTGTCTGTCATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCAAAAGGCTCCACTTGGTaGCTTGGGTCTGTAGAGGTC +
Preference number: 4 (lower is better)
Translates to: LLRPCLSSCPSCKASCGPKGSTW*LGSVEV
Trigger: GACCTCTACAGACCCAAGTCACCAAGTGGAGCCTTT...TGGCCCGCACGATGCCTTGCAGGATGGACAGGATGACAGACAGGGACGAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR GCA 90 bp TTGGTGACTTGGGTCTGTAGAGGTCTCTGCTTCGTCCCTGTCTGTCATCCTGTCGCATCCCGTACTTGGTaGCCACTGCTGTGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: LVTWVCRGLCFVPVCHPVASRTW*PLLCGG
Trigger: GCCCCCACACAGCAGTGGGCACCAAGTACGGGATGC...GACAGGATGACAGACAGGGACGAAGCAGAGACCTCTACAGACCCAAGTCACCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR GCA 90 bp CTTGTGGTGTTGGGTCAGTACGGGGTAGAACACAACGACAGCAGCCGCCAGACGTCTGTTCCTGGCTTCTaGCCGGGTTACCGTGTACTC +
Preference number: 4 (lower is better)
Translates to: LVVLGQYGVEHNDSSRQTSVPGF*PGYRVL
Trigger: GAGTACACGGTAACCCGGGCAGAAGCCAGGAACAGA...CGTCTGGCGGCTGCTGTCGTTGTGTTCTACCCCGTACTGACCCAACACCACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp CTTGTGGTGTTGGGTCAGTACGGGGTAGAACACAACGACAGCAGCCGCCAGACGACACCCACTGGTCACTaGAGTTTCGTCCCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: LVVLGQYGVEHNDSSRQTTPTGH*SFVPSL
Trigger: CAAGCTGGGGACGAAACTGCAGTGACCAGTGGGTGT...CGTCTGGCGGCTGCTGTCGTTGTGTTCTACCCCGTACTGACCCAACACCACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp TGTTGCCTCACTCCTCTCCTCACGGCTCCTTCCCATTTTGTTCACGTGGGGATGTCCTGCAAGGCATCGTaGGGGCCAGATCTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: CCLTPLLTAPSHFVHVGMSCKAS*GPDLEA
Trigger: AGCCTCCAGATCTGGCCCGCACGATGCCTTGCAGGA...CATCCCCACGTGAACAAAATGGGAAGGAGCCGTGAGGAGAGGAGTGAGGCAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp CTGGATGGCAGGACAAGAAAGAGCTGTAAACAGCTTGGGTCTGCTCACCCAAATGCCGAGGGCACTTTCTaGCCAGCCAGGGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LDGRTRKSCKQLGSAHPNAEGTF*PARGWQ
Trigger: CTGCCAGCCCCTGGCTGGGCAGAAAGTGCCCTCGGC...ATTTGGGTGAGCAGACCCAAGCTGTTTACAGCTCTTTCTTGTCCTGCCATCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp TTGGTGACTTGGGTCTGTAGAGGTCTCTGCTTCGTCCCTGTCTGTCATCCTGTCCACCCCACACCCAGGTaGCCATGCCGAGGGCACTTT +
Preference number: 4 (lower is better)
Translates to: LVTWVCRGLCFVPVCHPVHPTPR*PCRGHF
Trigger: AAAGTGCCCTCGGCATGGGCACCTGGGTGTGGGGTG...GACAGGATGACAGACAGGGACGAAGCAGAGACCTCTACAGACCCAAGTCACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR GCA 90 bp CATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCAGATCTGGAGGCTGGACCCACCAGCTCCAAAATCCTaGCTGCCTCTGACAAAACCA +
Preference number: 4 (lower is better)
Translates to: HPVHPARHRAGQIWRLDPPAPKS*LPLTKP
Trigger: TGGTTTTGTCAGAGGCAGGCAGGATTTTGGAGCTGG...TGGGTCCAGCCTCCAGATCTGGCCCGCACGATGCCTTGCAGGATGGACAGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR GCA 90 bp ACTGACCGAGGTTCTGGAACGGCAACGGTGGCAGGGAGGGTGTGGGGTATGCTCCCAGCTCCAAAATCCTaGCTGCCTCTGACAAAACCA +
Preference number: 4 (lower is better)
Translates to: TDRGSGTATVAGRVWGMLPAPKS*LPLTKP
Trigger: TGGTTTTGTCAGAGGCAGGCAGGATTTTGGAGCTGG...GAGCATACCCCACACCCTCCCTGCCACCGTTGCCGTTCCAGAACCTCGGTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp TTGCGTTGTCTGTTCCTGGCTTCTGCCCGGGTTACCGTGTACTCAAACCAGAGTCAGGGAGAGGCAGTCTaGCCTCTGGGCATAGGGCGA +
Preference number: 4 (lower is better)
Translates to: LRCLFLASARVTVYSNQSQGEAV*PLGIGR
Trigger: TCGCCCTATGCCCAGAGGGCAGACTGCCTCTCCCTG...ACTCTGGTTTGAGTACACGGTAACCCGGGCAGAAGCCAGGAACAGACAACGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327812.12
ENST00000412363.1
CDS-3UTR GCA 90 bp GCCCTGCCCCCAGACAGGGAAACACTGACCGAGGTTCTGGAACGGCAACGGTGGCTGCTCACCCAAATGTaGAGGCTCCTTTGTCAGAAA +
Preference number: 4 (lower is better)
Translates to: ALPPDRETLTEVLERQRWLLTQM*RLLCQK
Trigger: TTTCTGACAAAGGAGCCTGCACATTTGGGTGAGCAG...CCACCGTTGCCGTTCCAGAACCTCGGTCAGTGTTTCCCTGTCTGGGGGCAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp TTGGTGACTTGGGTCTGTAGAGGTCTCTGCTTCGTCCCTGTCTGTCATCCTGTCGCAGGATATTCGACGTaGGTGAGGGTCACCGGCCGC +
Preference number: 4 (lower is better)
Translates to: LVTWVCRGLCFVPVCHPVAGYST*VRVTGR
Trigger: GCGGCCGGTGACCCTCACCCACGTCGAATATCCTGC...GACAGGATGACAGACAGGGACGAAGCAGAGACCTCTACAGACCCAAGTCACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR CCA 90 bp GTGGGGAGGATTCGAACACAGATCCCGAGTGACCCAGTTCAGTCCTCAAAACTTCGTGCGGGCCAGATCTaGAGGCTGGACCCAGCCACA +
Preference number: 4 (lower is better)
Translates to: VGRIRTQIPSDPVQSSKLRAGQI*RLDPAT
Trigger: TGTGGCTGGGTCCAGCCTCCAGATCTGGCCCGCACG...AAGTTTTGAGGACTGAACTGGGTCACTCGGGATCTGTGTTCGAATCCTCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp TCAGAGCACACAGAGGGAAGGACGAGGGACTTCGGGTGCCTGTTGCCTCACTCCCTCCACTTGGTGACTTaGGTCTGTAGAGGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: SEHTEGRTRDFGCLLPHSLHLVT*VCRGLC
Trigger: GCAGAGACCTCTACAGACCCAAGTCACCAAGTGGAG...GGAGTGAGGCAACAGGCACCCGAAGTCCCTCGTCCTTCCCTCTGTGTGCTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp CACTGGTCACTGCAGTTTCGTCCCCAGCTTGCGTTGTCTGTTCCTGGCTTCTGCTCCTGGTTGAGGGGCTaGTTCAGCCCTTTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: HWSLQFRPQLALSVPGFCSWLRG*FSPLVH
Trigger: GTGGACCAAAGGGCTGAACCAGCCCCTCAACCAGGA...GCAGAAGCCAGGAACAGACAACGCAAGCTGGGGACGAAACTGCAGTGACCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327812.12
ENST00000412363.1
CDS-3UTR CCA 90 bp TGTCTGTCATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCAGATCTGGAGGCTCAGAGAAAGCCCTTGTaGTGTTGGGTCAGTACGGGG +
Preference number: 4 (lower is better)
Translates to: CLSSCPSCKASCGPDLEAQRKPL*CWVSTG
Trigger: CCCCGTACTGACCCAACACCACAAGGGCTTTCTCTG...AGCCTCCAGATCTGGCCCGCACGATGCCTTGCAGGATGGACAGGATGACAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp TCGTCCCTGTCTGTCATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCAGATCTCAGAGAAAGCCCTTGTaGTGTTGGGTCAGTACGGGG +
Preference number: 4 (lower is better)
Translates to: SSLSVILSILQGIVRARSQRKPL*CWVSTG
Trigger: CCCCGTACTGACCCAACACCACAAGGGCTTTCTCTG...AGATCTGGCCCGCACGATGCCTTGCAGGATGGACAGGATGACAGACAGGGACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp CGGGGTAGAACACAACGACAGCAGCCGCCAGACGCGTGCTCGCTCTGGGCCCTGAAGACTAACTGCTACTaGATGGCAGGACAAGAAAGA +
Preference number: 4 (lower is better)
Translates to: RGRTQRQQPPDACSLWALKTNCY*MAGQER
Trigger: TCTTTCTTGTCCTGCCATCCAGTAGCAGTTAGTCTT...CAGGGCCCAGAGCGAGCACGCGTCTGGCGGCTGCTGTCGTTGTGTTCTACCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp CTGCTTCGTCCCTGTCTGTCATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCAAAGCAGGTTCCCAGCTaGTCAGAGATGGGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: LLRPCLSSCPSCKASCGPKQVPS*SEMGQE
Trigger: TTCCTGACCCATCTCTGACCAGCTGGGAACCTGCTT...TGGCCCGCACGATGCCTTGCAGGATGGACAGGATGACAGACAGGGACGAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp CCTGCAAGGCATCGTGCGGGCCAGATCTGGAGGCTGGACCCAGCCACACCCACTTCTTGGCATCTGGAATaGCTTTTGGACACTGCCTTT +
Preference number: 4 (lower is better)
Translates to: PARHRAGQIWRLDPATPTSWHLE*LLDTAF
Trigger: AAAGGCAGTGTCCAAAAGCCATTCCAGATGCCAAGA...AGTGGGTGTGGCTGGGTCCAGCCTCCAGATCTGGCCCGCACGATGCCTTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp CTGCCCCCAGACAGGGAAACACTGACCGAGGTTCTGGAACGGCAACGGTGGCAGCCTGGTCTTGGCATCTaGAATGGCTTTTGGACACTG +
Preference number: 4 (lower is better)
Translates to: LPPDRETLTEVLERQRWQPGLGI*NGFWTL
Trigger: CAGTGTCCAAAAGCCATTCCAGATGCCAAGACCAGG...CTGCCACCGTTGCCGTTCCAGAACCTCGGTCAGTGTTTCCCTGTCTGGGGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR TCA 90 bp ATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCAGATCTGGAGGCTGGACCCAGAGAGTACGTTGGGAATaGGGCTTGTGTCTCGGATTA +
Preference number: 4 (lower is better)
Translates to: ILSILQGIVRARSGGWTQRVRWE*GLCLGL
Trigger: TAATCCGAGACACAAGCCTCATTCCCAACGTACTCT...CTGGGTCCAGCCTCCAGATCTGGCCCGCACGATGCCTTGCAGGATGGACAGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR TCA 90 bp TGTCTGTCATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCAGATCTGGAGGCTAAAGGCTCCACTTGGTaGCTTGGGTCTGTAGAGGTC +
Preference number: 4 (lower is better)
Translates to: CLSSCPSCKASCGPDLEAKGSTW*LGSVEV
Trigger: GACCTCTACAGACCCAAGTCACCAAGTGGAGCCTTT...AGCCTCCAGATCTGGCCCGCACGATGCCTTGCAGGATGGACAGGATGACAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR TCA 90 bp CTTGTGGTGTTGGGTCAGTACGGGGTAGAACACAACGACAGCAGCCGCCAGACGAGTCCTCAAAACTTCTaGGAGTCTGGAGGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: LVVLGQYGVEHNDSSRQTSPQNF*ESGGVS
Trigger: GGAGACGCCTCCAGACTCTCAGAAGTTTTGAGGACT...CGTCTGGCGGCTGCTGTCGTTGTGTTCTACCCCGTACTGACCCAACACCACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp CTTGTGGTGTTGGGTCAGTACGGGGTAGAACACAACGACAGCAGCCGCCAGACGGCCAGAGAGATCACCTaGAGGATATTCGACGTGGGT +
Preference number: 4 (lower is better)
Translates to: LVVLGQYGVEHNDSSRQTAREIT*RIFDVG
Trigger: ACCCACGTCGAATATCCTGCAGGTGATCTCTCTGGC...CGTCTGGCGGCTGCTGTCGTTGTGTTCTACCCCGTACTGACCCAACACCACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp GTGGGGAGGATTCGAACACAGATCCCGAGTGACCCAGTTCAGTCCTCAAAACTTACACCCAGGTGCCCATaGCGAGGGCACTTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: VGRIRTQIPSDPVQSSKLTPRCP*RGHFLP
Trigger: GGGCAGAAAGTGCCCTCGGCATGGGCACCTGGGTGT...AAGTTTTGAGGACTGAACTGGGTCACTCGGGATCTGTGTTCGAATCCTCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp CTGGATGGCAGGACAAGAAAGAGCTGTAAACAGCTTGGGTCTGCTCACCCAAATGGAGGGTGTGGGGTATaGTCCCCTCCTCCTGGCACC +
Preference number: 4 (lower is better)
Translates to: LDGRTRKSCKQLGSAHPNGGCGV*SPPPGT
Trigger: GGTGCCAGGAGGAGGGGAGCATACCCCACACCCTCC...ATTTGGGTGAGCAGACCCAAGCTGTTTACAGCTCTTTCTTGTCCTGCCATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp ACTGACCGAGGTTCTGGAACGGCAACGGTGGCAGGGAGGGTGTGGGGTATGCTCGGGATGAAGACTAACTaGTACTGGATGGCAGGACAA +
Preference number: 4 (lower is better)
Translates to: TDRGSGTATVAGRVWGMLGMKTN*YWMAGQ
Trigger: TTGTCCTGCCATCCAGTAGCAGTTAGTCTTCATCCC...GAGCATACCCCACACCCTCCCTGCCACCGTTGCCGTTCCAGAACCTCGGTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp GGGTCTGTAGAGGTCTCTGCTTCGTCCCTGTCTGTCATCCTGTCCATCCTGCAAACGAGGGACTTCGGGTaGCTGTTGCCTCACTCCTCT +
Preference number: 4 (lower is better)
Translates to: GSVEVSASSLSVILSILQTRDFG*LLPHSS
Trigger: AGAGGAGTGAGGCAACAGGCACCCGAAGTCCCTCGT...TTGCAGGATGGACAGGATGACAGACAGGGACGAAGCAGAGACCTCTACAGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp TCCCTGTCTGTCATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCAGATCTGGACACATAAACTGGGAATaGCTGGAGGGCATCCCGTAC +
Preference number: 4 (lower is better)
Translates to: SLSVILSILQGIVRARSGHINWE*LEGIPY
Trigger: GTACGGGATGCCCTCCAGCCATTCCCAGTTTATGTG...TCCAGATCTGGCCCGCACGATGCCTTGCAGGATGGACAGGATGACAGACAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR CCA 90 bp GTTCACGTGGGGATGAAGACTAACTGCTACTGGATGGCAGGACAAGAAAGAGCTGCCACCTGGAATTCCTaGCCCCGAGACCAGAGGCGC +
Preference number: 4 (lower is better)
Translates to: VHVGMKTNCYWMAGQERAATWNS*PRDQRR
Trigger: GCGCCTCTGGTCTCGGGGCCAGGAATTCCAGGTGGC...AGCTCTTTCTTGTCCTGCCATCCAGTAGCAGTTAGTCTTCATCCCCACGTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp GGGTCTGTAGAGGTCTCTGCTTCGTCCCTGTCTGTCATCCTGTCCATCCTGCAAACTTCTCACGCCACCTaGAATTCCTGGCCCCGAGAC +
Preference number: 4 (lower is better)
Translates to: GSVEVSASSLSVILSILQTSHAT*NSWPRD
Trigger: GTCTCGGGGCCAGGAATTCCAGGTGGCGTGAGAAGT...TTGCAGGATGGACAGGATGACAGACAGGGACGAAGCAGAGACCTCTACAGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR CCA 90 bp GCCCTGCCCCCAGACAGGGAAACACTGACCGAGGTTCTGGAACGGCAACGGTGGTCTTGGCATCTGGAATaGCTTTTGGACACTGCCTTT +
Preference number: 4 (lower is better)
Translates to: ALPPDRETLTEVLERQRWSWHLE*LLDTAF
Trigger: AAAGGCAGTGTCCAAAAGCCATTCCAGATGCCAAGA...CCACCGTTGCCGTTCCAGAACCTCGGTCAGTGTTTCCCTGTCTGGGGGCAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
3UTR CAA 72 bp CTTAGGGACAGGGGACCAGAGAAAGCCCTTGTGGTGTaGGGTCAGTACGGGGTAGAACACAACGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: LRDRGPEKALVV*GQYGVEHNDSS
Trigger: GCTGCTGTCGTTGTGTTCTACCCCGTACTGACCCAACACCACAAGGGCTTTCTCTGGTCCCCTGTCCCTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp GCTCCTTCCCATTTTGTTCACGTGGGGATGAAGACTAACTGCTACTGGATGGCAGTACTTGGTGCCCACTaGTGTGTGGGGGCCGTGTGC +
Preference number: 4 (lower is better)
Translates to: APSHFVHVGMKTNCYWMAVLGAH*CVGAVC
Trigger: GCACACGGCCCCCACACAGCAGTGGGCACCAAGTAC...TGCCATCCAGTAGCAGTTAGTCTTCATCCCCACGTGAACAAAATGGGAAGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327812.12
CDS-3UTR GCA 90 bp ACACAACGACAGCAGCCGCCAGACGCGTGCTCGCTCTGGGCCCTGCCCCCAGACGCGTTGTTTGTTTGGTaGATTCTTAAATACAGGAAA +
Preference number: 4 (lower is better)
Translates to: TQRQQPPDACSLWALPPDALFVW*ILKYRK
Trigger: TTTCCTGTATTTAAGAATGCACCAAACAAACAACGC...GTCTGGGGGCAGGGCCCAGAGCGAGCACGCGTCTGGCGGCTGCTGTCGTTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp CACACCCAGGTGCCCATGCCGAGGGCACTTTCTGCCCAGCCAGGGGCTGGCAGCGCGTTGTTTGTTTGGTaGATTCTTAAATACAGGAAA +
Preference number: 4 (lower is better)
Translates to: HTQVPMPRALSAQPGAGSALFVW*ILKYRK
Trigger: TTTCCTGTATTTAAGAATGCACCAAACAAACAACGC...GCTGCCAGCCCCTGGCTGGGCAGAAAGTGCCCTCGGCATGGGCACCTGGGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp AAAGGGGTGGGGAGGATTCGAACACAGATCCCGAGTGACCCAGTTCAGTCCTCATCTGTTCCTGGCTTCTaGCCGGGTTACCGTGTACTC +
Preference number: 4 (lower is better)
Translates to: KGVGRIRTQIPSDPVQSSSVPGF*PGYRVL
Trigger: GAGTACACGGTAACCCGGGCAGAAGCCAGGAACAGA...TGAGGACTGAACTGGGTCACTCGGGATCTGTGTTCGAATCCTCCCCACCCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp TGTTGCCTCACTCCTCTCCTCACGGCTCCTTCCCATTTTGTTCACGTGGGGATGACACCCACTGGTCACTaGAGTTTCGTCCCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: CCLTPLLTAPSHFVHVGMTPTGH*SFVPSL
Trigger: CAAGCTGGGGACGAAACTGCAGTGACCAGTGGGTGT...CATCCCCACGTGAACAAAATGGGAAGGAGCCGTGAGGAGAGGAGTGAGGCAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp TTGGTGACTTGGGTCTGTAGAGGTCTCTGCTTCGTCCCTGTCTGTCATCCTGTCTCATCCTGTCCATCCTaGAAGGCATCGTGCGGGCCA +
Preference number: 4 (lower is better)
Translates to: LVTWVCRGLCFVPVCHPVSSCPS*KASCGP
Trigger: TGGCCCGCACGATGCCTTGCAGGATGGACAGGATGA...GACAGGATGACAGACAGGGACGAAGCAGAGACCTCTACAGACCCAAGTCACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR GCA 90 bp TGTCTGTCATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCAGATCTGGAGGCTGTCTGTAGAGGTCTCTaGTTCGTCCCTGTCTGTCAT +
Preference number: 4 (lower is better)
Translates to: CLSSCPSCKASCGPDLEAVCRGL*FVPVCH
Trigger: ATGACAGACAGGGACGAAGCAGAGACCTCTACAGAC...AGCCTCCAGATCTGGCCCGCACGATGCCTTGCAGGATGGACAGGATGACAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR GCA 90 bp CTTGTGGTGTTGGGTCAGTACGGGGTAGAACACAACGACAGCAGCCGCCAGACGGTCTGTAGAGGTCTCTaGTTCGTCCCTGTCTGTCAT +
Preference number: 4 (lower is better)
Translates to: LVVLGQYGVEHNDSSRQTVCRGL*FVPVCH
Trigger: ATGACAGACAGGGACGAAGCAGAGACCTCTACAGAC...CGTCTGGCGGCTGCTGTCGTTGTGTTCTACCCCGTACTGACCCAACACCACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp CTGCAGTTTCGTCCCCAGCTTGCGTTGTCTGTTCCTGGCTTCTGCCCGGGTTACCCAGCTCCAAAATCCTaGCTGCCTCTGACAAAACCA +
Preference number: 4 (lower is better)
Translates to: LQFRPQLALSVPGFCPGYPAPKS*LPLTKP
Trigger: TGGTTTTGTCAGAGGCAGGCAGGATTTTGGAGCTGG...GTAACCCGGGCAGAAGCCAGGAACAGACAACGCAAGCTGGGGACGAAACTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327812.12
ENST00000412363.1
CDS-3UTR GCA 90 bp GTTACCGTGTACTCAAACCAGAGTACGTTGGGAATGAGGCTTGTGTCTCGGATTGCTCGCTCTGGGCCCTaGCCCCAGACAGGGAAACAC +
Preference number: 4 (lower is better)
Translates to: VTVYSNQSTLGMRLVSRIARSGP*PQTGKH
Trigger: GTGTTTCCCTGTCTGGGGGCAGGGCCCAGAGCGAGC...AATCCGAGACACAAGCCTCATTCCCAACGTACTCTGGTTTGAGTACACGGTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327812.12
CDS-3UTR GCA 90 bp CTGCTTCGTCCCTGTCTGTCATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCAGGGATGAAGACTAACTaGTACTGGATGGCAGGACAA +
Preference number: 4 (lower is better)
Translates to: LLRPCLSSCPSCKASCGPGMKTN*YWMAGQ
Trigger: TTGTCCTGCCATCCAGTAGCAGTTAGTCTTCATCCC...TGGCCCGCACGATGCCTTGCAGGATGGACAGGATGACAGACAGGGACGAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp TTGGTGACTTGGGTCTGTAGAGGTCTCTGCTTCGTCCCTGTCTGTCATCCTGTCACGAGGGACTTCGGGTaGCTGTTGCCTCACTCCTCT +
Preference number: 4 (lower is better)
Translates to: LVTWVCRGLCFVPVCHPVTRDFG*LLPHSS
Trigger: AGAGGAGTGAGGCAACAGGCACCCGAAGTCCCTCGT...GACAGGATGACAGACAGGGACGAAGCAGAGACCTCTACAGACCCAAGTCACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp GTCTGTCATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCAGATCTGGAGGCTGAAGAACCACATAAACTaGGAATGGCTGGAGGGCATC +
Preference number: 4 (lower is better)
Translates to: VCHPVHPARHRAGQIWRLKNHIN*EWLEGI
Trigger: GATGCCCTCCAGCCATTCCCAGTTTATGTGGTTCTT...CAGCCTCCAGATCTGGCCCGCACGATGCCTTGCAGGATGGACAGGATGACAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR CCA 90 bp GCTCCTTCCCATTTTGTTCACGTGGGGATGAAGACTAACTGCTACTGGATGGCAGCCAGATCTGGAGGCTaGACCCAGCCACACCCACTG +
Preference number: 4 (lower is better)
Translates to: APSHFVHVGMKTNCYWMAARSGG*TQPHPL
Trigger: CAGTGGGTGTGGCTGGGTCCAGCCTCCAGATCTGGC...TGCCATCCAGTAGCAGTTAGTCTTCATCCCCACGTGAACAAAATGGGAAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp CCCAGCTTGCGTTGTCTGTTCCTGGCTTCTGCCCGGGTTACCGTGTACTCAAACCTCCACTTGGTGACTTaGGTCTGTAGAGGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: PSLRCLFLASARVTVYSNLHLVT*VCRGLC
Trigger: GCAGAGACCTCTACAGACCCAAGTCACCAAGTGGAG...GTTTGAGTACACGGTAACCCGGGCAGAAGCCAGGAACAGACAACGCAAGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327812.12
ENST00000412363.1
CDS-3UTR CCA 90 bp ATTCGAACACAGATCCCGAGTGACCCAGTTCAGTCCTCAAAACTTCTGAGAGTCGCCACCTGGAATTCCTaGCCCCGAGACCAGAGGCGC +
Preference number: 4 (lower is better)
Translates to: IRTQIPSDPVQSSKLLRVATWNS*PRDQRR
Trigger: GCGCCTCTGGTCTCGGGGCCAGGAATTCCAGGTGGC...GACTCTCAGAAGTTTTGAGGACTGAACTGGGTCACTCGGGATCTGTGTTCGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp TTGGTGACTTGGGTCTGTAGAGGTCTCTGCTTCGTCCCTGTCTGTCATCCTGTCACTTCTCACGCCACCTaGAATTCCTGGCCCCGAGAC +
Preference number: 4 (lower is better)
Translates to: LVTWVCRGLCFVPVCHPVTSHAT*NSWPRD
Trigger: GTCTCGGGGCCAGGAATTCCAGGTGGCGTGAGAAGT...GACAGGATGACAGACAGGGACGAAGCAGAGACCTCTACAGACCCAAGTCACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR CCA 90 bp CTGCTTCGTCCCTGTCTGTCATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCACTAACTGCTACTGGATaGCAGGACAAGAAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: LLRPCLSSCPSCKASCGPLTATG*QDKKEL
Trigger: CAGCTCTTTCTTGTCCTGCCATCCAGTAGCAGTTAG...TGGCCCGCACGATGCCTTGCAGGATGGACAGGATGACAGACAGGGACGAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp GGTCTCTGCTTCGTCCCTGTCTGTCATCCTGTCCATCCTGCAAGGCATCGTGCGAAACTTCTGAGAGTCTaGAGGCGTCTCCTCTCCACA +
Preference number: 4 (lower is better)
Translates to: GLCFVPVCHPVHPARHRAKLLRV*RRLLST
Trigger: TGTGGAGAGGAGACGCCTCCAGACTCTCAGAAGTTT...CGCACGATGCCTTGCAGGATGGACAGGATGACAGACAGGGACGAAGCAGAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp TCCCTGTCTGTCATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCAGATCTGGACCTGGTCTTGGCATCTaGAATGGCTTTTGGACACTG +
Preference number: 4 (lower is better)
Translates to: SLSVILSILQGIVRARSGPGLGI*NGFWTL
Trigger: CAGTGTCCAAAAGCCATTCCAGATGCCAAGACCAGG...TCCAGATCTGGCCCGCACGATGCCTTGCAGGATGGACAGGATGACAGACAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR TCA 90 bp CTTGTGGTGTTGGGTCAGTACGGGGTAGAACACAACGACAGCAGCCGCCAGACGTTGTTCACGTGGGGATaGAGACTAACTGCTACTGGA +
Preference number: 4 (lower is better)
Translates to: LVVLGQYGVEHNDSSRQTLFTWG*RLTATG
Trigger: TCCAGTAGCAGTTAGTCTTCATCCCCACGTGAACAA...CGTCTGGCGGCTGCTGTCGTTGTGTTCTACCCCGTACTGACCCAACACCACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR TCA 90 bp AAAGGGGTGGGGAGGATTCGAACACAGATCCCGAGTGACCCAGTTCAGTCCTCAAGTCCTCAAAACTTCTaGGAGTCTGGAGGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: KGVGRIRTQIPSDPVQSSSPQNF*ESGGVS
Trigger: GGAGACGCCTCCAGACTCTCAGAAGTTTTGAGGACT...TGAGGACTGAACTGGGTCACTCGGGATCTGTGTTCGAATCCTCCCCACCCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp GCTTCTGCCCGGGTTACCGTGTACTCAAACCAGAGTACGTTGGGAATGAGGCTTACACCCACTGGTCACTaGAGTTTCGTCCCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: ASARVTVYSNQSTLGMRLTPTGH*SFVPSL
Trigger: CAAGCTGGGGACGAAACTGCAGTGACCAGTGGGTGT...AAGCCTCATTCCCAACGTACTCTGGTTTGAGTACACGGTAACCCGGGCAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327812.12
ENST00000412363.1
CDS-3UTR GCA 90 bp GCTCCTTCCCATTTTGTTCACGTGGGGATGAAGACTAACTGCTACTGGATGGCATCCTGCAAGGCATCGTaGGGGCCAGATCTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: APSHFVHVGMKTNCYWMASCKAS*GPDLEA
Trigger: AGCCTCCAGATCTGGCCCGCACGATGCCTTGCAGGA...TGCCATCCAGTAGCAGTTAGTCTTCATCCCCACGTGAACAAAATGGGAAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp GTTACCGTGTACTCAAACCAGAGTACGTTGGGAATGAGGCTTGTGTCTCGGATTACACCCAGGTGCCCATaGCGAGGGCACTTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: VTVYSNQSTLGMRLVSRITPRCP*RGHFLP
Trigger: GGGCAGAAAGTGCCCTCGGCATGGGCACCTGGGTGT...AATCCGAGACACAAGCCTCATTCCCAACGTACTCTGGTTTGAGTACACGGTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327812.12
ENST00000412363.1
CDS-3UTR GCA 90 bp TCGTCCCTGTCTGTCATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCAGATCTCTGCTCACCCAAATGTaGAGGCTCCTTTGTCAGAAA +
Preference number: 4 (lower is better)
Translates to: SSLSVILSILQGIVRARSLLTQM*RLLCQK
Trigger: TTTCTGACAAAGGAGCCTGCACATTTGGGTGAGCAG...AGATCTGGCCCGCACGATGCCTTGCAGGATGGACAGGATGACAGACAGGGACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp GTGGGGAGGATTCGAACACAGATCCCGAGTGACCCAGTTCAGTCCTCAAAACTTACTTCGGGTGCCTGTTaGCTCACTCCTCTCCTCACG +
Preference number: 4 (lower is better)
Translates to: VGRIRTQIPSDPVQSSKLTSGAC*LTPLLT
Trigger: CGTGAGGAGAGGAGTGAGGCAACAGGCACCCGAAGT...AAGTTTTGAGGACTGAACTGGGTCACTCGGGATCTGTGTTCGAATCCTCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp CTGCTTCGTCCCTGTCTGTCATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCAAGCACCAAAACATTGTaGTTCAGCAGCAGGTTAGGA +
Preference number: 4 (lower is better)
Translates to: LLRPCLSSCPSCKASCGPSTKTL*FSSRLG
Trigger: TCCTAACCTGCTGCTGAAGCACAATGTTTTGGTGCT...TGGCCCGCACGATGCCTTGCAGGATGGACAGGATGACAGACAGGGACGAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp AGTACGTTGGGAATGAGGCTTGTGTCTCGGATTAGGAAGAACTCGGAGACAGGCTGCGTTGTCTGTTCCTaGCTTCTGCCCGGGTTACCG +
Preference number: 4 (lower is better)
Translates to: STLGMRLVSRIRKNSETGCVVCS*LLPGLP
Trigger: CGGTAACCCGGGCAGAAGCCAGGAACAGACAACGCA...GCCTGTCTCCGAGTTCTTCCTAATCCGAGACACAAGCCTCATTCCCAACGTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327812.12
ENST00000412363.1
CDS-3UTR CCA 90 bp GTTCACGTGGGGATGAAGACTAACTGCTACTGGATGGCAGGACAAGAAAGAGCTCCCAGCCACACCCACTaGTCACTGCAGTTTCGTCCC +
Preference number: 4 (lower is better)
Translates to: VHVGMKTNCYWMAGQERAPSHTH*SLQFRP
Trigger: GGGACGAAACTGCAGTGACCAGTGGGTGTGGCTGGG...AGCTCTTTCTTGTCCTGCCATCCAGTAGCAGTTAGTCTTCATCCCCACGTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR TCA 90 bp TTGGTGACTTGGGTCTGTAGAGGTCTCTGCTTCGTCCCTGTCTGTCATCCTGTCAAAGGCTCCACTTGGTaGCTTGGGTCTGTAGAGGTC +
Preference number: 4 (lower is better)
Translates to: LVTWVCRGLCFVPVCHPVKGSTW*LGSVEV
Trigger: GACCTCTACAGACCCAAGTCACCAAGTGGAGCCTTT...GACAGGATGACAGACAGGGACGAAGCAGAGACCTCTACAGACCCAAGTCACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR TCA 90 bp GCTCCTTCCCATTTTGTTCACGTGGGGATGAAGACTAACTGCTACTGGATGGCACAGACAGGGAAACACTaGCCGAGGTTCTGGAACGGC +
Preference number: 4 (lower is better)
Translates to: APSHFVHVGMKTNCYWMAQTGKH*PRFWNG
Trigger: GCCGTTCCAGAACCTCGGTCAGTGTTTCCCTGTCTG...TGCCATCCAGTAGCAGTTAGTCTTCATCCCCACGTGAACAAAATGGGAAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR TCA 90 bp TTGGTGACTTGGGTCTGTAGAGGTCTCTGCTTCGTCCCTGTCTGTCATCCTGTCAACTCCCTTTCAGAGTaGCTTAGAGATGGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: LVTWVCRGLCFVPVCHPVNSLSE*LRDGGP
Trigger: GGGACCCCCATCTCTAAGTCACTCTGAAAGGGAGTT...GACAGGATGACAGACAGGGACGAAGCAGAGACCTCTACAGACCCAAGTCACCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR TCA 90 bp ACCAGAGAAAGCCCTTGTGGTGTTGGGTCAGTACGGGGTAGAACACAACGACAGAACTCCCTTTCAGAGTaGCTTAGAGATGGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: TRESPCGVGSVRGRTQRQNSLSE*LRDGGP
Trigger: GGGACCCCCATCTCTAAGTCACTCTGAAAGGGAGTT...CTGTCGTTGTGTTCTACCCCGTACTGACCCAACACCACAAGGGCTTTCTCTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR TCA 90 bp GGGTCTGTAGAGGTCTCTGCTTCGTCCCTGTCTGTCATCCTGTCCATCCTGCAAAACACAGATCCCGAGTaGCCCAGTTCAGTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: GSVEVSASSLSVILSILQNTDPE*PSSVLK
Trigger: TTTGAGGACTGAACTGGGTCACTCGGGATCTGTGTT...TTGCAGGATGGACAGGATGACAGACAGGGACGAAGCAGAGACCTCTACAGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp CCCAGCTTGCGTTGTCTGTTCCTGGCTTCTGCCCGGGTTACCGTGTACTCAAACCTGCTCACCCAAATGTaGAGGCTCCTTTGTCAGAAA +
Preference number: 4 (lower is better)
Translates to: PSLRCLFLASARVTVYSNLLTQM*RLLCQK
Trigger: TTTCTGACAAAGGAGCCTGCACATTTGGGTGAGCAG...GTTTGAGTACACGGTAACCCGGGCAGAAGCCAGGAACAGACAACGCAAGCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327812.12
CDS-3UTR GCA 90 bp CTGGATGGCAGGACAAGAAAGAGCTGTAAACAGCTTGGGTCTGCTCACCCAAATACTTCGGGTGCCTGTTaGCTCACTCCTCTCCTCACG +
Preference number: 4 (lower is better)
Translates to: LDGRTRKSCKQLGSAHPNTSGAC*LTPLLT
Trigger: CGTGAGGAGAGGAGTGAGGCAACAGGCACCCGAAGT...ATTTGGGTGAGCAGACCCAAGCTGTTTACAGCTCTTTCTTGTCCTGCCATCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp GCTTCTGCCCGGGTTACCGTGTACTCAAACCAGAGTACGTTGGGAATGAGGCTTCACATAAACTGGGAATaGCTGGAGGGCATCCCGTAC +
Preference number: 4 (lower is better)
Translates to: ASARVTVYSNQSTLGMRLHINWE*LEGIPY
Trigger: GTACGGGATGCCCTCCAGCCATTCCCAGTTTATGTG...AAGCCTCATTCCCAACGTACTCTGGTTTGAGTACACGGTAACCCGGGCAGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327812.12
ENST00000412363.1
CDS-3UTR CCA 90 bp CATATTCAGAGCACACAGAGGGAAGGACGAGGGACTTCGGGTGCCTGTTGCCTCAAGAACCACATAAACTaGGAATGGCTGGAGGGCATC +
Preference number: 4 (lower is better)
Translates to: HIQSTQREGRGTSGACCLKNHIN*EWLEGI
Trigger: GATGCCCTCCAGCCATTCCCAGTTTATGTGGTTCTT...GAGGCAACAGGCACCCGAAGTCCCTCGTCCTTCCCTCTGTGTGCTCTGAATATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp GACAAGGACATATTCAGAGCACACAGAGGGAAGGACGAGGGACTTCGGGTGCCTAAACTTCTGAGAGTCTaGAGGCGTCTCCTCTCCACA +
Preference number: 4 (lower is better)
Translates to: DKDIFRAHRGKDEGLRVPKLLRV*RRLLST
Trigger: TGTGGAGAGGAGACGCCTCCAGACTCTCAGAAGTTT...AGGCACCCGAAGTCCCTCGTCCTTCCCTCTGTGTGCTCTGAATATGTCCTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp TGTTGCCTCACTCCTCTCCTCACGGCTCCTTCCCATTTTGTTCACGTGGGGATGCCACAAAGAAAGGGGTaGGGAGGATTCGAACACAGA +
Preference number: 4 (lower is better)
Translates to: CCLTPLLTAPSHFVHVGMPQRKG*GGFEHR
Trigger: TCTGTGTTCGAATCCTCCCCACCCCTTTCTTTGTGG...CATCCCCACGTGAACAAAATGGGAAGGAGCCGTGAGGAGAGGAGTGAGGCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR TCA 90 bp GACAAGGACATATTCAGAGCACACAGAGGGAAGGACGAGGGACTTCGGGTGCCTTTGTTCACGTGGGGATaGAGACTAACTGCTACTGGA +
Preference number: 4 (lower is better)
Translates to: DKDIFRAHRGKDEGLRVPLFTWG*RLTATG
Trigger: TCCAGTAGCAGTTAGTCTTCATCCCCACGTGAACAA...AGGCACCCGAAGTCCCTCGTCCTTCCCTCTGTGTGCTCTGAATATGTCCTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp GGAAGGACGAGGGACTTCGGGTGCCTGTTGCCTCACTCCTCTCCTCACGGCTCCGCGTTGTTTGTTTGGTaGATTCTTAAATACAGGAAA +
Preference number: 4 (lower is better)
Translates to: GRTRDFGCLLPHSSPHGSALFVW*ILKYRK
Trigger: TTTCCTGTATTTAAGAATGCACCAAACAAACAACGC...GGAGCCGTGAGGAGAGGAGTGAGGCAACAGGCACCCGAAGTCCCTCGTCCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp GCTCCTTCCCATTTTGTTCACGTGGGGATGAAGACTAACTGCTACTGGATGGCAACTCGGAGACAGGCCTaGTGTAGGAGACTAGGAAGG +
Preference number: 4 (lower is better)
Translates to: APSHFVHVGMKTNCYWMATRRQA*CRRLGR
Trigger: CCTTCCTAGTCTCCTACAGCAGGCCTGTCTCCGAGT...TGCCATCCAGTAGCAGTTAGTCTTCATCCCCACGTGAACAAAATGGGAAGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327812.12
ENST00000406974.7
CDS-3UTR GCA 90 bp GCTTCTGCCCGGGTTACCGTGTACTCAAACCAGAGTACGTTGGGAATGAGGCTTGTCTGTAGAGGTCTCTaGTTCGTCCCTGTCTGTCAT +
Preference number: 4 (lower is better)
Translates to: ASARVTVYSNQSTLGMRLVCRGL*FVPVCH
Trigger: ATGACAGACAGGGACGAAGCAGAGACCTCTACAGAC...AAGCCTCATTCCCAACGTACTCTGGTTTGAGTACACGGTAACCCGGGCAGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327812.12
ENST00000412363.1
CDS-3UTR GCA 90 bp ATAAAAATAACGGGAGGGAAACATGGAAACCGACCTACCTTCCCTAGAAATAAGGCCGAGGGCACTTTCTaGCCAGCCAGGGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: IKITGGKHGNRPTFPRNKAEGTF*PARGWQ
Trigger: CTGCCAGCCCCTGGCTGGGCAGAAAGTGCCCTCGGC...CTTATTTCTAGGGAAGGTAGGTCGGTTTCCATGTTTCCCTCCCGTTATTTTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp TCTGCCCGGGTTACCGTGTACTCAAACCAGAGTACGTTGGGAATGAGGCTTGTGCCAGCTCCAAAATCCTaGCTGCCTCTGACAAAACCA +
Preference number: 4 (lower is better)
Translates to: SARVTVYSNQSTLGMRLVPAPKS*LPLTKP
Trigger: TGGTTTTGTCAGAGGCAGGCAGGATTTTGGAGCTGG...CACAAGCCTCATTCCCAACGTACTCTGGTTTGAGTACACGGTAACCCGGGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327812.12
ENST00000412363.1
CDS-3UTR CCA 90 bp CATGGAAACCGACCTACCTTCCCTAGAAATAAGCCCCTGGTCTTGGCATCTGGACACATAAACTGGGAATaGCTGGAGGGCATCCCGTAC +
Preference number: 4 (lower is better)
Translates to: HGNRPTFPRNKPLVLASGHINWE*LEGIPY
Trigger: GTACGGGATGCCCTCCAGCCATTCCCAGTTTATGTG...TCCAGATGCCAAGACCAGGGGCTTATTTCTAGGGAAGGTAGGTCGGTTTCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp GTGGGGAGGATTCGAACACAGATCCCGAGTGACCCAGTTCAGTCCTCAAAACTTCTCCACTTGGTGACTTaGGTCTGTAGAGGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: VGRIRTQIPSDPVQSSKLLHLVT*VCRGLC
Trigger: GCAGAGACCTCTACAGACCCAAGTCACCAAGTGGAG...AAGTTTTGAGGACTGAACTGGGTCACTCGGGATCTGTGTTCGAATCCTCCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp CAGAGTGACTTAGAGATGGGGGTCCCTTTAGGAAGAGCCCTCCCACGAACCAGGGCTGGTTCAGCCCTTTaGTCCACCTTGTTCATTAAA +
Preference number: 4 (lower is better)
Translates to: QSDLEMGVPLGRALPRTRAGSAL*STLFIK
Trigger: TTTAATGAACAAGGTGGACCAAAGGGCTGAACCAGC...CCTGGTTCGTGGGAGGGCTCTTCCTAAAGGGACCCCCATCTCTAAGTCACTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp GTTCACGTGGGGATGAAGACTAACTGCTACTGGATGGCAGGACAAGAAAGAGCTCAGGGCCGTGGCTCCTaGATGACGTTTTTGATCAGC +
Preference number: 4 (lower is better)
Translates to: VHVGMKTNCYWMAGQERAQGRGS*MTFLIS
Trigger: GCTGATCAAAAACGTCATCCAGGAGCCACGGCCCTG...AGCTCTTTCTTGTCCTGCCATCCAGTAGCAGTTAGTCTTCATCCCCACGTGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372546.9
ENST00000406974.7
CDS-3UTR TCA 90 bp TTGCGTTGTCTGTTCCTGGCTTCTGCCCGGGTTACCGTGTACTCAAACCAGAGTAGAGTACGTTGGGAATaGGGCTTGTGTCTCGGATTA +
Preference number: 4 (lower is better)
Translates to: LRCLFLASARVTVYSNQSRVRWE*GLCLGL
Trigger: TAATCCGAGACACAAGCCTCATTCCCAACGTACTCT...ACTCTGGTTTGAGTACACGGTAACCCGGGCAGAAGCCAGGAACAGACAACGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327812.12
ENST00000412363.1
CDS-3UTR TCA 90 bp TTGGTGACTTGGGTCTGTAGAGGTCTCTGCTTCGTCCCTGTCTGTCATCCTGTCTTGTTCACGTGGGGATaGAGACTAACTGCTACTGGA +
Preference number: 4 (lower is better)
Translates to: LVTWVCRGLCFVPVCHPVLFTWG*RLTATG
Trigger: TCCAGTAGCAGTTAGTCTTCATCCCCACGTGAACAA...GACAGGATGACAGACAGGGACGAAGCAGAGACCTCTACAGACCCAAGTCACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR TCA 90 bp GCTCCTTCCCATTTTGTTCACGTGGGGATGAAGACTAACTGCTACTGGATGGCAAGTCCTCAAAACTTCTaGGAGTCTGGAGGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: APSHFVHVGMKTNCYWMASPQNF*ESGGVS
Trigger: GGAGACGCCTCCAGACTCTCAGAAGTTTTGAGGACT...TGCCATCCAGTAGCAGTTAGTCTTCATCCCCACGTGAACAAAATGGGAAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp ATAAAAATAACGGGAGGGAAACATGGAAACCGACCTACCTTCCCTAGAAATAAGGCTCGCTCTGGGCCCTaGCCCCAGACAGGGAAACAC +
Preference number: 4 (lower is better)
Translates to: IKITGGKHGNRPTFPRNKARSGP*PQTGKH
Trigger: GTGTTTCCCTGTCTGGGGGCAGGGCCCAGAGCGAGC...CTTATTTCTAGGGAAGGTAGGTCGGTTTCCATGTTTCCCTCCCGTTATTTTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp TACTCAAACCAGAGTACGTTGGGAATGAGGCTTGTGTCTCGGATTAGGAAGAACTCCTGGTTGAGGGGCTaGTTCAGCCCTTTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: YSNQSTLGMRLVSRIRKNSWLRG*FSPLVH
Trigger: GTGGACCAAAGGGCTGAACCAGCCCCTCAACCAGGA...GTTCTTCCTAATCCGAGACACAAGCCTCATTCCCAACGTACTCTGGTTTGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327812.12
ENST00000412363.1
CDS-3UTR CCA 90 bp ATTTCATTGATTTTTCTTAAATCAAACCACCTCATACTCGGCTTGTCTCAGGCACACAGCGAGGGTCTCTaGCCACGGCCCCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: ISLIFLKSNHLILGLSQAHSEGL*PRPPGS
Trigger: GCTGCCTGGGGGCCGTGGCCAGAGACCCTCGCTGTG...TGCCTGAGACAAGCCGAGTATGAGGTGGTTTGATTTAAGAAAAATCAATGAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp TACTCAAACCAGAGTACGTTGGGAATGAGGCTTGTGTCTCGGATTAGGAAGAACACTTCTCACGCCACCTaGAATTCCTGGCCCCGAGAC +
Preference number: 4 (lower is better)
Translates to: YSNQSTLGMRLVSRIRKNTSHAT*NSWPRD
Trigger: GTCTCGGGGCCAGGAATTCCAGGTGGCGTGAGAAGT...GTTCTTCCTAATCCGAGACACAAGCCTCATTCCCAACGTACTCTGGTTTGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327812.12
ENST00000412363.1
CDS-3UTR CCA 90 bp TTGGTGACTTGGGTCTGTAGAGGTCTCTGCTTCGTCCCTGTCTGTCATCCTGTCCTAACTGCTACTGGATaGCAGGACAAGAAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: LVTWVCRGLCFVPVCHPVLTATG*QDKKEL
Trigger: CAGCTCTTTCTTGTCCTGCCATCCAGTAGCAGTTAG...GACAGGATGACAGACAGGGACGAAGCAGAGACCTCTACAGACCCAAGTCACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp TCTGCCCGGGTTACCGTGTACTCAAACCAGAGTACGTTGGGAATGAGGCTTGTGCTAGAAATAAGCCCCTaGTCTTGGCATCTGGAATGG +
Preference number: 4 (lower is better)
Translates to: SARVTVYSNQSTLGMRLVLEISP*SWHLEW
Trigger: CCATTCCAGATGCCAAGACCAGGGGCTTATTTCTAG...CACAAGCCTCATTCCCAACGTACTCTGGTTTGAGTACACGGTAACCCGGGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327812.12
CDS-3UTR TCA 90 bp GCTCCTTCCCATTTTGTTCACGTGGGGATGAAGACTAACTGCTACTGGATGGCAAACACAGATCCCGAGTaGCCCAGTTCAGTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: APSHFVHVGMKTNCYWMANTDPE*PSSVLK
Trigger: TTTGAGGACTGAACTGGGTCACTCGGGATCTGTGTT...TGCCATCCAGTAGCAGTTAGTCTTCATCCCCACGTGAACAAAATGGGAAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp GTGGGGAGGATTCGAACACAGATCCCGAGTGACCCAGTTCAGTCCTCAAAACTTGGGATGAAGACTAACTaGTACTGGATGGCAGGACAA +
Preference number: 4 (lower is better)
Translates to: VGRIRTQIPSDPVQSSKLGMKTN*YWMAGQ
Trigger: TTGTCCTGCCATCCAGTAGCAGTTAGTCTTCATCCC...AAGTTTTGAGGACTGAACTGGGTCACTCGGGATCTGTGTTCGAATCCTCCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp GTGGGGAGGATTCGAACACAGATCCCGAGTGACCCAGTTCAGTCCTCAAAACTTAGGAAGGAGATCGTGTaGAGCTCCCGCTTAAATATG +
Preference number: 4 (lower is better)
Translates to: VGRIRTQIPSDPVQSSKLRKEIV*SSRLNM
Trigger: CATATTTAAGCGGGAGCTGCACACGATCTCCTTCCT...AAGTTTTGAGGACTGAACTGGGTCACTCGGGATCTGTGTTCGAATCCTCCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp GCTCCTTCCCATTTTGTTCACGTGGGGATGAAGACTAACTGCTACTGGATGGCAGCAAGTCCAGGAACCTaGCGTTGTTTGTTTGGTGCA +
Preference number: 4 (lower is better)
Translates to: APSHFVHVGMKTNCYWMAASPGT*RCLFGA
Trigger: TGCACCAAACAAACAACGCCAGGTTCCTGGACTTGC...TGCCATCCAGTAGCAGTTAGTCTTCATCCCCACGTGAACAAAATGGGAAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp TTGCGTTGTCTGTTCCTGGCTTCTGCCCGGGTTACCGTGTACTCAAACCAGAGTGCTGGTTCAGCCCTTTaGTCCACCTTGTTCATTAAA +
Preference number: 4 (lower is better)
Translates to: LRCLFLASARVTVYSNQSAGSAL*STLFIK
Trigger: TTTAATGAACAAGGTGGACCAAAGGGCTGAACCAGC...ACTCTGGTTTGAGTACACGGTAACCCGGGCAGAAGCCAGGAACAGACAACGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327812.12
ENST00000412363.1
CDS-3UTR CCA 90 bp TTGGTGACTTGGGTCTGTAGAGGTCTCTGCTTCGTCCCTGTCTGTCATCCTGTCGCTGGTTCAGCCCTTTaGTCCACCTTGTTCATTAAA +
Preference number: 4 (lower is better)
Translates to: LVTWVCRGLCFVPVCHPVAGSAL*STLFIK
Trigger: TTTAATGAACAAGGTGGACCAAAGGGCTGAACCAGC...GACAGGATGACAGACAGGGACGAAGCAGAGACCTCTACAGACCCAAGTCACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR CCA 90 bp TTCCTGGCTTCTGCCCGGGTTACCGTGTACTCAAACCAGAGTACGTTGGGAATGGCTGGTTCAGCCCTTTaGTCCACCTTGTTCATTAAA +
Preference number: 4 (lower is better)
Translates to: FLASARVTVYSNQSTLGMAGSAL*STLFIK
Trigger: TTTAATGAACAAGGTGGACCAAAGGGCTGAACCAGC...CATTCCCAACGTACTCTGGTTTGAGTACACGGTAACCCGGGCAGAAGCCAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327812.12
ENST00000412363.1
CDS-3UTR CCA 90 bp AAAATAAAAATAACGGGAGGGAAACATGGAAACCGACCTACCTTCCCTAGAAATATAGGGCGAAGGGCCTaGGAAGCTGACCGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: KIKITGGKHGNRPTFPRNIGRRA*EADREP
Trigger: GGGCTCCCGGTCAGCTTCCCAGGCCCTTCGCCCTAT...ATTTCTAGGGAAGGTAGGTCGGTTTCCATGTTTCCCTCCCGTTATTTTTATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp GACAAGGACATATTCAGAGCACACAGAGGGAAGGACGAGGGACTTCGGGTGCCTAAGACTAACTGCTACTaGATGGCAGGACAAGAAAGA +
Preference number: 4 (lower is better)
Translates to: DKDIFRAHRGKDEGLRVPKTNCY*MAGQER
Trigger: TCTTTCTTGTCCTGCCATCCAGTAGCAGTTAGTCTT...AGGCACCCGAAGTCCCTCGTCCTTCCCTCTGTGTGCTCTGAATATGTCCTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp TTGCGTTGTCTGTTCCTGGCTTCTGCCCGGGTTACCGTGTACTCAAACCAGAGTTCTTGGCATCTGGAATaGCTTTTGGACACTGCCTTT +
Preference number: 4 (lower is better)
Translates to: LRCLFLASARVTVYSNQSSWHLE*LLDTAF
Trigger: AAAGGCAGTGTCCAAAAGCCATTCCAGATGCCAAGA...ACTCTGGTTTGAGTACACGGTAACCCGGGCAGAAGCCAGGAACAGACAACGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327812.12
CDS-3UTR TCA 90 bp GCTCCTTCCCATTTTGTTCACGTGGGGATGAAGACTAACTGCTACTGGATGGCAAGAGTACGTTGGGAATaGGGCTTGTGTCTCGGATTA +
Preference number: 4 (lower is better)
Translates to: APSHFVHVGMKTNCYWMARVRWE*GLCLGL
Trigger: TAATCCGAGACACAAGCCTCATTCCCAACGTACTCT...TGCCATCCAGTAGCAGTTAGTCTTCATCCCCACGTGAACAAAATGGGAAGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR GCA 90 bp TACTCAAACCAGAGTACGTTGGGAATGAGGCTTGTGTCTCGGATTAGGAAGAACGCCAGAGAGATCACCTaGAGGATATTCGACGTGGGT +
Preference number: 4 (lower is better)
Translates to: YSNQSTLGMRLVSRIRKNAREIT*RIFDVG
Trigger: ACCCACGTCGAATATCCTGCAGGTGATCTCTCTGGC...GTTCTTCCTAATCCGAGACACAAGCCTCATTCCCAACGTACTCTGGTTTGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327812.12
ENST00000412363.1
CDS-3UTR GCA 90 bp GCTCCTTCCCATTTTGTTCACGTGGGGATGAAGACTAACTGCTACTGGATGGCAAGGAAGGAGATCGTGTaGAGCTCCCGCTTAAATATG +
Preference number: 4 (lower is better)
Translates to: APSHFVHVGMKTNCYWMARKEIV*SSRLNM
Trigger: CATATTTAAGCGGGAGCTGCACACGATCTCCTTCCT...TGCCATCCAGTAGCAGTTAGTCTTCATCCCCACGTGAACAAAATGGGAAGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp GTTCACGTGGGGATGAAGACTAACTGCTACTGGATGGCAGGACAAGAAAGAGCTAAGAACCACATAAACTaGGAATGGCTGGAGGGCATC +
Preference number: 4 (lower is better)
Translates to: VHVGMKTNCYWMAGQERAKNHIN*EWLEGI
Trigger: GATGCCCTCCAGCCATTCCCAGTTTATGTGGTTCTT...AGCTCTTTCTTGTCCTGCCATCCAGTAGCAGTTAGTCTTCATCCCCACGTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp CTGGATGGCAGGACAAGAAAGAGCTGTAAACAGCTTGGGTCTGCTCACCCAAATCTAACTGCTACTGGATaGCAGGACAAGAAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: LDGRTRKSCKQLGSAHPNLTATG*QDKKEL
Trigger: CAGCTCTTTCTTGTCCTGCCATCCAGTAGCAGTTAG...ATTTGGGTGAGCAGACCCAAGCTGTTTACAGCTCTTTCTTGTCCTGCCATCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp TTGGTGACTTGGGTCTGTAGAGGTCTCTGCTTCGTCCCTGTCTGTCATCCTGTCCTGGCGTTGTTTGTTTaGTGCATTCTTAAATACAGG +
Preference number: 4 (lower is better)
Translates to: LVTWVCRGLCFVPVCHPVLALFV*CILKYR
Trigger: CCTGTATTTAAGAATGCACCAAACAAACAACGCCAG...GACAGGATGACAGACAGGGACGAAGCAGAGACCTCTACAGACCCAAGTCACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp ACCAGAGAAAGCCCTTGTGGTGTTGGGTCAGTACGGGGTAGAACACAACGACAGCTGGCGTTGTTTGTTTaGTGCATTCTTAAATACAGG +
Preference number: 4 (lower is better)
Translates to: TRESPCGVGSVRGRTQRQLALFV*CILKYR
Trigger: CCTGTATTTAAGAATGCACCAAACAAACAACGCCAG...CTGTCGTTGTGTTCTACCCCGTACTGACCCAACACCACAAGGGCTTTCTCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp TACTCAAACCAGAGTACGTTGGGAATGAGGCTTGTGTCTCGGATTAGGAAGAACGCAAGTCCAGGAACCTaGCGTTGTTTGTTTGGTGCA +
Preference number: 4 (lower is better)
Translates to: YSNQSTLGMRLVSRIRKNASPGT*RCLFGA
Trigger: TGCACCAAACAAACAACGCCAGGTTCCTGGACTTGC...GTTCTTCCTAATCCGAGACACAAGCCTCATTCCCAACGTACTCTGGTTTGAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327812.12
CDS-3UTR TCA 90 bp TACTCAAACCAGAGTACGTTGGGAATGAGGCTTGTGTCTCGGATTAGGAAGAACAGAGTACGTTGGGAATaGGGCTTGTGTCTCGGATTA +
Preference number: 4 (lower is better)
Translates to: YSNQSTLGMRLVSRIRKNRVRWE*GLCLGL
Trigger: TAATCCGAGACACAAGCCTCATTCCCAACGTACTCT...GTTCTTCCTAATCCGAGACACAAGCCTCATTCCCAACGTACTCTGGTTTGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327812.12
ENST00000412363.1
CDS-3UTR GCA 90 bp GTTACCGTGTACTCAAACCAGAGTACGTTGGGAATGAGGCTTGTGTCTCGGATTAGCACCAAAACATTGTaGTTCAGCAGCAGGTTAGGA +
Preference number: 4 (lower is better)
Translates to: VTVYSNQSTLGMRLVSRISTKTL*FSSRLG
Trigger: TCCTAACCTGCTGCTGAAGCACAATGTTTTGGTGCT...AATCCGAGACACAAGCCTCATTCCCAACGTACTCTGGTTTGAGTACACGGTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327812.12
CDS-3UTR CCA 90 bp TTGCGTTGTCTGTTCCTGGCTTCTGCCCGGGTTACCGTGTACTCAAACCAGAGTATCTGGAATGGCTTTTaGACACTGCCTTTAACAAAT +
Preference number: 4 (lower is better)
Translates to: LRCLFLASARVTVYSNQSIWNGF*TLPLTN
Trigger: ATTTGTTAAAGGCAGTGTCCAAAAGCCATTCCAGAT...ACTCTGGTTTGAGTACACGGTAACCCGGGCAGAAGCCAGGAACAGACAACGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327812.12
CDS-3UTR CCA 90 bp ACCAGAGAAAGCCCTTGTGGTGTTGGGTCAGTACGGGGTAGAACACAACGACAGATCTGGAATGGCTTTTaGACACTGCCTTTAACAAAT +
Preference number: 4 (lower is better)
Translates to: TRESPCGVGSVRGRTQRQIWNGF*TLPLTN
Trigger: ATTTGTTAAAGGCAGTGTCCAAAAGCCATTCCAGAT...CTGTCGTTGTGTTCTACCCCGTACTGACCCAACACCACAAGGGCTTTCTCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp CATGGAAACCGACCTACCTTCCCTAGAAATAAGCCCCTGGTCTTGGCATCTGGAATCTGGAATGGCTTTTaGACACTGCCTTTAACAAAT +
Preference number: 4 (lower is better)
Translates to: HGNRPTFPRNKPLVLASGIWNGF*TLPLTN
Trigger: ATTTGTTAAAGGCAGTGTCCAAAAGCCATTCCAGAT...TCCAGATGCCAAGACCAGGGGCTTATTTCTAGGGAAGGTAGGTCGGTTTCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp ATTTCATTGATTTTTCTTAAATCAAACCACCTCATACTCGGCTTGTCTCAGGCACAGAGAAAGCCCTTGTaGTGTTGGGTCAGTACGGGG +
Preference number: 4 (lower is better)
Translates to: ISLIFLKSNHLILGLSQAQRKPL*CWVSTG
Trigger: CCCCGTACTGACCCAACACCACAAGGGCTTTCTCTG...TGCCTGAGACAAGCCGAGTATGAGGTGGTTTGATTTAAGAAAAATCAATGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp ATAAAAATAACGGGAGGGAAACATGGAAACCGACCTACCTTCCCTAGAAATAAGCTAGAAATAAGCCCCTaGTCTTGGCATCTGGAATGG +
Preference number: 4 (lower is better)
Translates to: IKITGGKHGNRPTFPRNKLEISP*SWHLEW
Trigger: CCATTCCAGATGCCAAGACCAGGGGCTTATTTCTAG...CTTATTTCTAGGGAAGGTAGGTCGGTTTCCATGTTTCCCTCCCGTTATTTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CCA 90 bp AAAATAAAAATAACGGGAGGGAAACATGGAAACCGACCTACCTTCCCTAGAAATAAGACTAACTGCTACTaGATGGCAGGACAAGAAAGA +
Preference number: 4 (lower is better)
Translates to: KIKITGGKHGNRPTFPRNKTNCY*MAGQER
Trigger: TCTTTCTTGTCCTGCCATCCAGTAGCAGTTAGTCTT...ATTTCTAGGGAAGGTAGGTCGGTTTCCATGTTTCCCTCCCGTTATTTTTATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CAA 90 bp TCCTCCACCCCACACCCAGGTGCCCATGCCGAGGGCACTTTCTGCCCAGCCAGGCCCCCAGGGTCCTGGTaGAGGGGCTGGTTCAGCCCT +
Preference number: 5 (lower is better)
Translates to: SSTPHPGAHAEGTFCPARPPGSW*RGWFSP
Trigger: AGGGCTGAACCAGCCCCTCAACCAGGACCCTGGGGG...CCTGGCTGGGCAGAAAGTGCCCTCGGCATGGGCACCTGGGTGTGGGGTGGAGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR CAA 90 bp CACGCCACCTGGAATTCCTGGCCCCGAGACCAGAGGCGCGAGCCCTCCTCCTCCCGTCCCCAGCTTGCGTaGTCTGTTCCTGGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: HATWNSWPRDQRREPSSSRPQLA*SVPGFC
Trigger: GCAGAAGCCAGGAACAGACAACGCAAGCTGGGGACG...GGAGGAGGAGGGCTCGCGCCTCTGGTCTCGGGGCCAGGAATTCCAGGTGGCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS TCA 90 bp ATCACCTGCAGGATATTCGACGTGGGTGAGGGTCACCGGCCGCCATaGAGCGGGGAGCGAGCACTGTCCGTCCGCTGCCATCTTACCCGG +
Preference number: 5 (lower is better)
Translates to: ITCRIFDVGEGHRPP*SGERALSVRCHLTR
Trigger: CCGGGTAAGATGGCAGCGGACGGACAGTGCTCGCTCCCCGCTTCATGGCGGCCGGTGACCCTCACCCACGTCGAATATCCTGCAGGTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CAA 90 bp CTGTCCATCCTGCAAGGCATCGTGCGGGCCAGATCTGGAGGCTGGACCCAGCCAGAGGGCATCCCGTACTaGGTGCCCACTGCTGTGTGG +
Preference number: 5 (lower is better)
Translates to: LSILQGIVRARSGGWTQPEGIPY*VPTAVW
Trigger: CCACACAGCAGTGGGCACCAAGTACGGGATGCCCTC...TGGCTGGGTCCAGCCTCCAGATCTGGCCCGCACGATGCCTTGCAGGATGGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR CAA 90 bp CACGCCACCTGGAATTCCTGGCCCCGAGACCAGAGGCGCGAGCCCTCCTCCTCCGACCAGAGAAAGCCCTaGTGGTGTTGGGTCAGTACG +
Preference number: 5 (lower is better)
Translates to: HATWNSWPRDQRREPSSSDQRKP*WCWVST
Trigger: CGTACTGACCCAACACCACAAGGGCTTTCTCTGGTC...GGAGGAGGAGGGCTCGCGCCTCTGGTCTCGGGGCCAGGAATTCCAGGTGGCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CAA 90 bp GGCTGGACCCAGCCACACCCACTGGTCACTGCAGTTTCGTCCCCAGCTTGCGTTGAGGGCATCCCGTACTaGGTGCCCACTGCTGTGTGG +
Preference number: 5 (lower is better)
Translates to: GWTQPHPLVTAVSSPACVEGIPY*VPTAVW
Trigger: CCACACAGCAGTGGGCACCAAGTACGGGATGCCCTC...AACGCAAGCTGGGGACGAAACTGCAGTGACCAGTGGGTGTGGCTGGGTCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327812.12
ENST00000412363.1
CDS-3UTR CAA 90 bp TCCCTGTCTGTCATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCAGATCTGGACCCCCAGGGTCCTGGTaGAGGGGCTGGTTCAGCCCT +
Preference number: 5 (lower is better)
Translates to: SLSVILSILQGIVRARSGPPGSW*RGWFSP
Trigger: AGGGCTGAACCAGCCCCTCAACCAGGACCCTGGGGG...TCCAGATCTGGCCCGCACGATGCCTTGCAGGATGGACAGGATGACAGACAGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR CAA 90 bp CCACCCCACACCCAGGTGCCCATGCCGAGGGCACTTTCTGCCCAGCCAGGGGCTTTTTTGATCAGCCAGTaGACCCCCTCGTTCAGTGCC +
Preference number: 5 (lower is better)
Translates to: PPHTQVPMPRALSAQPGAFLISQ*TPSFSA
Trigger: GGCACTGAACGAGGGGGTCAACTGGCTGATCAAAAA...AGCCCCTGGCTGGGCAGAAAGTGCCCTCGGCATGGGCACCTGGGTGTGGGGTGG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CAA 90 bp CTGCTTCGTCCCTGTCTGTCATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCAGAGGGCATCCCGTACTaGGTGCCCACTGCTGTGTGG +
Preference number: 5 (lower is better)
Translates to: LLRPCLSSCPSCKASCGPEGIPY*VPTAVW
Trigger: CCACACAGCAGTGGGCACCAAGTACGGGATGCCCTC...TGGCCCGCACGATGCCTTGCAGGATGGACAGGATGACAGACAGGGACGAAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR CAA 90 bp CGGGGTAGAACACAACGACAGCAGCCGCCAGACGCGTGCTCGCTCTGGGCCCTGTCCTGGATGACGTTTTaGATCAGCCAGTTGACCCCC +
Preference number: 5 (lower is better)
Translates to: RGRTQRQQPPDACSLWALSWMTF*ISQLTP
Trigger: GGGGGTCAACTGGCTGATCAAAAACGTCATCCAGGA...CAGGGCCCAGAGCGAGCACGCGTCTGGCGGCTGCTGTCGTTGTGTTCTACCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CAA 90 bp TCCCTGTCTGTCATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCAGATCTGGAGAGGGCATCCCGTACTaGGTGCCCACTGCTGTGTGG +
Preference number: 5 (lower is better)
Translates to: SLSVILSILQGIVRARSGEGIPY*VPTAVW
Trigger: CCACACAGCAGTGGGCACCAAGTACGGGATGCCCTC...TCCAGATCTGGCCCGCACGATGCCTTGCAGGATGGACAGGATGACAGACAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR CAA 90 bp CACACCCAGGTGCCCATGCCGAGGGCACTTTCTGCCCAGCCAGGGGCTGGCAGCTCCAGGAACCTGGCGTaGTTTGTTTGGTGCATTCTT +
Preference number: 5 (lower is better)
Translates to: HTQVPMPRALSAQPGAGSSRNLA*FVWCIL
Trigger: AAGAATGCACCAAACAAACAACGCCAGGTTCCTGGA...GCTGCCAGCCCCTGGCTGGGCAGAAAGTGCCCTCGGCATGGGCACCTGGGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CAA 90 bp CACGCCACCTGGAATTCCTGGCCCCGAGACCAGAGGCGCGAGCCCTCCTCCTCCTCAAACCAGAGTACGTaGGGAATGAGGCTTGTGTCT +
Preference number: 5 (lower is better)
Translates to: HATWNSWPRDQRREPSSSSNQST*GMRLVS
Trigger: AGACACAAGCCTCATTCCCAACGTACTCTGGTTTGA...GGAGGAGGAGGGCTCGCGCCTCTGGTCTCGGGGCCAGGAATTCCAGGTGGCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR CAA 90 bp CTGCTTCGTCCCTGTCTGTCATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCACGTCCCCAGCTTGCGTaGTCTGTTCCTGGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: LLRPCLSSCPSCKASCGPRPQLA*SVPGFC
Trigger: GCAGAAGCCAGGAACAGACAACGCAAGCTGGGGACG...TGGCCCGCACGATGCCTTGCAGGATGGACAGGATGACAGACAGGGACGAAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR CAA 90 bp ACACAACGACAGCAGCCGCCAGACGCGTGCTCGCTCTGGGCCCTGCCCCCAGACAATAAGCCCCTGGTCTaGGCATCTGGAATGGCTTTT +
Preference number: 5 (lower is better)
Translates to: TQRQQPPDACSLWALPPDNKPLV*ASGMAF
Trigger: AAAAGCCATTCCAGATGCCAAGACCAGGGGCTTATT...GTCTGGGGGCAGGGCCCAGAGCGAGCACGCGTCTGGCGGCTGCTGTCGTTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CAA 90 bp CTGCAGTTTCGTCCCCAGCTTGCGTTGTCTGTTCCTGGCTTCTGCCCGGGTTACCGTCCCCAGCTTGCGTaGTCTGTTCCTGGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: LQFRPQLALSVPGFCPGYRPQLA*SVPGFC
Trigger: GCAGAAGCCAGGAACAGACAACGCAAGCTGGGGACG...GTAACCCGGGCAGAAGCCAGGAACAGACAACGCAAGCTGGGGACGAAACTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327812.12
ENST00000412363.1
CDS-3UTR CAA 90 bp GGTCTCTGCTTCGTCCCTGTCTGTCATCCTGTCCATCCTGCAAGGCATCGTGCGCGTCCCCAGCTTGCGTaGTCTGTTCCTGGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: GLCFVPVCHPVHPARHRARPQLA*SVPGFC
Trigger: GCAGAAGCCAGGAACAGACAACGCAAGCTGGGGACG...CGCACGATGCCTTGCAGGATGGACAGGATGACAGACAGGGACGAAGCAGAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR CAA 90 bp TTGCGTTGTCTGTTCCTGGCTTCTGCCCGGGTTACCGTGTACTCAAACCAGAGTCCCCCAGGGTCCTGGTaGAGGGGCTGGTTCAGCCCT +
Preference number: 5 (lower is better)
Translates to: LRCLFLASARVTVYSNQSPPGSW*RGWFSP
Trigger: AGGGCTGAACCAGCCCCTCAACCAGGACCCTGGGGG...ACTCTGGTTTGAGTACACGGTAACCCGGGCAGAAGCCAGGAACAGACAACGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327812.12
ENST00000412363.1
CDS-3UTR CAA 90 bp GGCTGGACCCAGCCACACCCACTGGTCACTGCAGTTTCGTCCCCAGCTTGCGTTGACCAGAGAAAGCCCTaGTGGTGTTGGGTCAGTACG +
Preference number: 5 (lower is better)
Translates to: GWTQPHPLVTAVSSPACVDQRKP*WCWVST
Trigger: CGTACTGACCCAACACCACAAGGGCTTTCTCTGGTC...AACGCAAGCTGGGGACGAAACTGCAGTGACCAGTGGGTGTGGCTGGGTCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327812.12
CDS-3UTR CAA 90 bp CTGCCCCCAGACAGGGAAACACTGACCGAGGTTCTGGAACGGCAACGGTGGCAGGACCAGAGAAAGCCCTaGTGGTGTTGGGTCAGTACG +
Preference number: 5 (lower is better)
Translates to: LPPDRETLTEVLERQRWQDQRKP*WCWVST
Trigger: CGTACTGACCCAACACCACAAGGGCTTTCTCTGGTC...CTGCCACCGTTGCCGTTCCAGAACCTCGGTCAGTGTTTCCCTGTCTGGGGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CAA 90 bp CACACCCAGGTGCCCATGCCGAGGGCACTTTCTGCCCAGCCAGGGGCTGGCAGCCACCTCATACTCGGCTaGTCTCAGGCAAAAAGTAAA +
Preference number: 5 (lower is better)
Translates to: HTQVPMPRALSAQPGAGSHLILG*SQAKSK
Trigger: TTTACTTTTTGCCTGAGACAAGCCGAGTATGAGGTG...GCTGCCAGCCCCTGGCTGGGCAGAAAGTGCCCTCGGCATGGGCACCTGGGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CAA 90 bp CTGCTTCGTCCCTGTCTGTCATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCAAGTTTCGTCCCCAGCTaGCGTTGTCTGTTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: LLRPCLSSCPSCKASCGPSFVPS*RCLFLA
Trigger: AGCCAGGAACAGACAACGCAAGCTGGGGACGAAACT...TGGCCCGCACGATGCCTTGCAGGATGGACAGGATGACAGACAGGGACGAAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR CAA 90 bp CATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCAGATCTGGAGGCTGGACCCAAAAGCCCTTGTGGTGTaGGGTCAGTACGGGGTAGAA +
Preference number: 5 (lower is better)
Translates to: HPVHPARHRAGQIWRLDPKALVV*GQYGVE
Trigger: TTCTACCCCGTACTGACCCAACACCACAAGGGCTTT...TGGGTCCAGCCTCCAGATCTGGCCCGCACGATGCCTTGCAGGATGGACAGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CAA 90 bp CACCCAGGTGCCCATGCCGAGGGCACTTTCTGCCCAGCCAGGGGCTGGCAGCAGAATGTGCAGGCTCCTTaGTCAGAAAGCGATTATTGT +
Preference number: 5 (lower is better)
Translates to: HPGAHAEGTFCPARGWQQNVQAP*SESDYC
Trigger: ACAATAATCGCTTTCTGACAAAGGAGCCTGCACATT...CTGCTGCCAGCCCCTGGCTGGGCAGAAAGTGCCCTCGGCATGGGCACCTGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CAA 90 bp CTGTCCATCCTGCAAGGCATCGTGCGGGCCAGATCTGGAGGCTGGACCCAGCCAAGAGCTGTAAACAGCTaGGGTCTGCTCACCCAAATG +
Preference number: 5 (lower is better)
Translates to: LSILQGIVRARSGGWTQPRAVNS*GLLTQM
Trigger: CATTTGGGTGAGCAGACCCAAGCTGTTTACAGCTCT...TGGCTGGGTCCAGCCTCCAGATCTGGCCCGCACGATGCCTTGCAGGATGGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CAA 90 bp GGAAGGACGAGGGACTTCGGGTGCCTGTTGCCTCACTCCTCTCCTCACGGCTCCTCAAACCAGAGTACGTaGGGAATGAGGCTTGTGTCT +
Preference number: 5 (lower is better)
Translates to: GRTRDFGCLLPHSSPHGSSNQST*GMRLVS
Trigger: AGACACAAGCCTCATTCCCAACGTACTCTGGTTTGA...GGAGCCGTGAGGAGAGGAGTGAGGCAACAGGCACCCGAAGTCCCTCGTCCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CAA 90 bp TGCTTCGTCCCTGTCTGTCATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCAGAAAGCCCTTGTGGTGTaGGGTCAGTACGGGGTAGAA +
Preference number: 5 (lower is better)
Translates to: CFVPVCHPVHPARHRAGQKALVV*GQYGVE
Trigger: TTCTACCCCGTACTGACCCAACACCACAAGGGCTTT...CTGGCCCGCACGATGCCTTGCAGGATGGACAGGATGACAGACAGGGACGAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CAA 90 bp GGAAACACTGACCGAGGTTCTGGAACGGCAACGGTGGCAGGGAGGGTGTGGGGTAGAGCTGTAAACAGCTaGGGTCTGCTCACCCAAATG +
Preference number: 5 (lower is better)
Translates to: GNTDRGSGTATVAGRVWGRAVNS*GLLTQM
Trigger: CATTTGGGTGAGCAGACCCAAGCTGTTTACAGCTCT...ACCCCACACCCTCCCTGCCACCGTTGCCGTTCCAGAACCTCGGTCAGTGTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CAA 90 bp GGCTGGACCCAGCCACACCCACTGGTCACTGCAGTTTCGTCCCCAGCTTGCGTTTCAAACCAGAGTACGTaGGGAATGAGGCTTGTGTCT +
Preference number: 5 (lower is better)
Translates to: GWTQPHPLVTAVSSPACVSNQST*GMRLVS
Trigger: AGACACAAGCCTCATTCCCAACGTACTCTGGTTTGA...AACGCAAGCTGGGGACGAAACTGCAGTGACCAGTGGGTGTGGCTGGGTCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327812.12
ENST00000412363.1
CDS-3UTR CAA 90 bp TGCAAGGCATCGTGCGGGCCAGATCTGGAGGCTGGACCCAGCCACACCCACTGGCATCTGGAATGGCTTTaGGACACTGCCTTTAACAAA +
Preference number: 5 (lower is better)
Translates to: CKASCGPDLEAGPSHTHWHLEWL*DTAFNK
Trigger: TTTGTTAAAGGCAGTGTCCAAAAGCCATTCCAGATG...CCAGTGGGTGTGGCTGGGTCCAGCCTCCAGATCTGGCCCGCACGATGCCTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CAA 90 bp ATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCAGATCTGGAGGCTGGACCCAGAATAAGCCCCTGGTCTaGGCATCTGGAATGGCTTTT +
Preference number: 5 (lower is better)
Translates to: ILSILQGIVRARSGGWTQNKPLV*ASGMAF
Trigger: AAAAGCCATTCCAGATGCCAAGACCAGGGGCTTATT...CTGGGTCCAGCCTCCAGATCTGGCCCGCACGATGCCTTGCAGGATGGACAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CAA 90 bp CTGTCCATCCTGCAAGGCATCGTGCGGGCCAGATCTGGAGGCTGGACCCAGCCAGGAACCTGGCGTTGTTaGTTTGGTGCATTCTTAAAT +
Preference number: 5 (lower is better)
Translates to: LSILQGIVRARSGGWTQPGTWRC*FGAFLN
Trigger: ATTTAAGAATGCACCAAACAAACAACGCCAGGTTCC...TGGCTGGGTCCAGCCTCCAGATCTGGCCCGCACGATGCCTTGCAGGATGGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CAA 90 bp GGGTCTGTAGAGGTCTCTGCTTCGTCCCTGTCTGTCATCCTGTCCATCCTGCAAAGTTTCGTCCCCAGCTaGCGTTGTCTGTTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: GSVEVSASSLSVILSILQSFVPS*RCLFLA
Trigger: AGCCAGGAACAGACAACGCAAGCTGGGGACGAAACT...TTGCAGGATGGACAGGATGACAGACAGGGACGAAGCAGAGACCTCTACAGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS-3UTR CAA 90 bp CTTGTGGTGTTGGGTCAGTACGGGGTAGAACACAACGACAGCAGCCGCCAGACGAGAGCTGTAAACAGCTaGGGTCTGCTCACCCAAATG +
Preference number: 5 (lower is better)
Translates to: LVVLGQYGVEHNDSSRQTRAVNS*GLLTQM
Trigger: CATTTGGGTGAGCAGACCCAAGCTGTTTACAGCTCT...CGTCTGGCGGCTGCTGTCGTTGTGTTCTACCCCGTACTGACCCAACACCACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CAA 90 bp CTGCTTCGTCCCTGTCTGTCATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCAAATAAGCCCCTGGTCTaGGCATCTGGAATGGCTTTT +
Preference number: 5 (lower is better)
Translates to: LLRPCLSSCPSCKASCGPNKPLV*ASGMAF
Trigger: AAAAGCCATTCCAGATGCCAAGACCAGGGGCTTATT...TGGCCCGCACGATGCCTTGCAGGATGGACAGGATGACAGACAGGGACGAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CAA 90 bp CAGAGTGACTTAGAGATGGGGGTCCCTTTAGGAAGAGCCCTCCCACGAACCAGGTCCTGGATGACGTTTTaGATCAGCCAGTTGACCCCC +
Preference number: 5 (lower is better)
Translates to: QSDLEMGVPLGRALPRTRSWMTF*ISQLTP
Trigger: GGGGGTCAACTGGCTGATCAAAAACGTCATCCAGGA...CCTGGTTCGTGGGAGGGCTCTTCCTAAAGGGACCCCCATCTCTAAGTCACTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372546.9
ENST00000406974.7
CDS TCA 90 bp CTTCTGCCCGGGTTACCGTGTACTCAAACCAGAGTACGTTGGGAATaGGGCTTGTGTCTCGGATTAGGAAGAACTCGGAGACAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: LLPGLPCTQTRVRWE*GLCLGLGRTRRQAR
Trigger: CCTGGCCTGTCTCCGAGTTCTTCCTAATCCGAGACACAAGCCTCATTCCCAACGTACTCTGGTTTGAGTACACGGTAACCCGGGCAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372546.9
CDS-3UTR CAA 90 bp GGTCTCTGCTTCGTCCCTGTCTGTCATCCTGTCCATCCTGCAAGGCATCGTGCGTCCAGGAACCTGGCGTaGTTTGTTTGGTGCATTCTT +
Preference number: 5 (lower is better)
Translates to: GLCFVPVCHPVHPARHRASRNLA*FVWCIL
Trigger: AAGAATGCACCAAACAAACAACGCCAGGTTCCTGGA...CGCACGATGCCTTGCAGGATGGACAGGATGACAGACAGGGACGAAGCAGAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CAA 90 bp TTCCTGGCTTCTGCCCGGGTTACCGTGTACTCAAACCAGAGTACGTTGGGAATGAGTTTCGTCCCCAGCTaGCGTTGTCTGTTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: FLASARVTVYSNQSTLGMSFVPS*RCLFLA
Trigger: AGCCAGGAACAGACAACGCAAGCTGGGGACGAAACT...CATTCCCAACGTACTCTGGTTTGAGTACACGGTAACCCGGGCAGAAGCCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327812.12
ENST00000412363.1
CDS-3UTR CAA 90 bp TGTTGCCTCACTCCTCTCCTCACGGCTCCTTCCCATTTTGTTCACGTGGGGATGAAAGCCCTTGTGGTGTaGGGTCAGTACGGGGTAGAA +
Preference number: 5 (lower is better)
Translates to: CCLTPLLTAPSHFVHVGMKALVV*GQYGVE
Trigger: TTCTACCCCGTACTGACCCAACACCACAAGGGCTTT...CATCCCCACGTGAACAAAATGGGAAGGAGCCGTGAGGAGAGGAGTGAGGCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CAA 90 bp GGAAACACTGACCGAGGTTCTGGAACGGCAACGGTGGCAGGGAGGGTGTGGGGTCATCTGGAATGGCTTTaGGACACTGCCTTTAACAAA +
Preference number: 5 (lower is better)
Translates to: GNTDRGSGTATVAGRVWGHLEWL*DTAFNK
Trigger: TTTGTTAAAGGCAGTGTCCAAAAGCCATTCCAGATG...ACCCCACACCCTCCCTGCCACCGTTGCCGTTCCAGAACCTCGGTCAGTGTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CAA 90 bp CTTGTGGTGTTGGGTCAGTACGGGGTAGAACACAACGACAGCAGCCGCCAGACGCACCTCATACTCGGCTaGTCTCAGGCAAAAAGTAAA +
Preference number: 5 (lower is better)
Translates to: LVVLGQYGVEHNDSSRQTHLILG*SQAKSK
Trigger: TTTACTTTTTGCCTGAGACAAGCCGAGTATGAGGTG...CGTCTGGCGGCTGCTGTCGTTGTGTTCTACCCCGTACTGACCCAACACCACAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CAA 90 bp ACCAGAGAAAGCCCTTGTGGTGTTGGGTCAGTACGGGGTAGAACACAACGACAGTTTTTGATCAGCCAGTaGACCCCCTCGTTCAGTGCC +
Preference number: 5 (lower is better)
Translates to: TRESPCGVGSVRGRTQRQFLISQ*TPSFSA
Trigger: GGCACTGAACGAGGGGGTCAACTGGCTGATCAAAAA...CTGTCGTTGTGTTCTACCCCGTACTGACCCAACACCACAAGGGCTTTCTCTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372546.9
ENST00000406974.7
CDS TCA 90 bp CTTCTGCCCGGGTTACCGTGTACTCAAACCAGAGTACGTTGGGAATaGGGCTTGTGTCTCGGATTAGGAAGAACTCGGAGACAGGCCTTA +
Preference number: 5 (lower is better)
Translates to: LLPGLPCTQTRVRWE*GLCLGLGRTRRQAL
Trigger: TAAGGCCTGTCTCCGAGTTCTTCCTAATCCGAGACACAAGCCTCATTCCCAACGTACTCTGGTTTGAGTACACGGTAACCCGGGCAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412363.1
CDS CCA 90 bp GGAGTCCCAGGGAGAGCACGTGCCTCCACAGCAAGTCCAGGAACCTaGCGTTGTTTGTTTGGTGCATTCTTAAATACAGGAAAAGGAAGG +
Preference number: 5 (lower is better)
Translates to: GVPGRARASTASPGT*RCLFGAFLNTGKGR
Trigger: CCTTCCTTTTCCTGTATTTAAGAATGCACCAAACAAACAACGCCAGGTTCCTGGACTTGCTGTGGAGGCACGTGCTCTCCCTGGGACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CAA 90 bp TGTCTGTCATCCTGTCCATCCTGCAAGGCATCGTGCGGGCCAGATCTGGAGGCTAATGTGCAGGCTCCTTaGTCAGAAAGCGATTATTGT +
Preference number: 5 (lower is better)
Translates to: CLSSCPSCKASCGPDLEANVQAP*SESDYC
Trigger: ACAATAATCGCTTTCTGACAAAGGAGCCTGCACATT...AGCCTCCAGATCTGGCCCGCACGATGCCTTGCAGGATGGACAGGATGACAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CAA 90 bp CACTGGTCACTGCAGTTTCGTCCCCAGCTTGCGTTGTCTGTTCCTGGCTTCTGCGAAAGCACCAAAACATaGTGCTTCAGCAGCAGGTTA +
Preference number: 5 (lower is better)
Translates to: HWSLQFRPQLALSVPGFCESTKT*CFSSRL
Trigger: TAACCTGCTGCTGAAGCACAATGTTTTGGTGCTTTC...GCAGAAGCCAGGAACAGACAACGCAAGCTGGGGACGAAACTGCAGTGACCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327812.12
CDS-3UTR CAA 90 bp TGTTGCCTCACTCCTCTCCTCACGGCTCCTTCCCATTTTGTTCACGTGGGGATGGAAAGCACCAAAACATaGTGCTTCAGCAGCAGGTTA +
Preference number: 5 (lower is better)
Translates to: CCLTPLLTAPSHFVHVGMESTKT*CFSSRL
Trigger: TAACCTGCTGCTGAAGCACAATGTTTTGGTGCTTTC...CATCCCCACGTGAACAAAATGGGAAGGAGCCGTGAGGAGAGGAGTGAGGCAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CAA 90 bp GTGGGGAGGATTCGAACACAGATCCCGAGTGACCCAGTTCAGTCCTCAAAACTTTCCAGGAACCTGGCGTaGTTTGTTTGGTGCATTCTT +
Preference number: 5 (lower is better)
Translates to: VGRIRTQIPSDPVQSSKLSRNLA*FVWCIL
Trigger: AAGAATGCACCAAACAAACAACGCCAGGTTCCTGGA...AAGTTTTGAGGACTGAACTGGGTCACTCGGGATCTGTGTTCGAATCCTCCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CAA 90 bp CATGGAAACCGACCTACCTTCCCTAGAAATAAGCCCCTGGTCTTGGCATCTGGATCAAACCAGAGTACGTaGGGAATGAGGCTTGTGTCT +
Preference number: 5 (lower is better)
Translates to: HGNRPTFPRNKPLVLASGSNQST*GMRLVS
Trigger: AGACACAAGCCTCATTCCCAACGTACTCTGGTTTGA...TCCAGATGCCAAGACCAGGGGCTTATTTCTAGGGAAGGTAGGTCGGTTTCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CAA 90 bp ATTTCATTGATTTTTCTTAAATCAAACCACCTCATACTCGGCTTGTCTCAGGCACCCCCAGGGTCCTGGTaGAGGGGCTGGTTCAGCCCT +
Preference number: 5 (lower is better)
Translates to: ISLIFLKSNHLILGLSQAPPGSW*RGWFSP
Trigger: AGGGCTGAACCAGCCCCTCAACCAGGACCCTGGGGG...TGCCTGAGACAAGCCGAGTATGAGGTGGTTTGATTTAAGAAAAATCAATGAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CAA 90 bp TTGGTGACTTGGGTCTGTAGAGGTCTCTGCTTCGTCCCTGTCTGTCATCCTGTCGAAAGCACCAAAACATaGTGCTTCAGCAGCAGGTTA +
Preference number: 5 (lower is better)
Translates to: LVTWVCRGLCFVPVCHPVESTKT*CFSSRL
Trigger: TAACCTGCTGCTGAAGCACAATGTTTTGGTGCTTTC...GACAGGATGACAGACAGGGACGAAGCAGAGACCTCTACAGACCCAAGTCACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CAA 90 bp ACCAGAGAAAGCCCTTGTGGTGTTGGGTCAGTACGGGGTAGAACACAACGACAGCACCTCATACTCGGCTaGTCTCAGGCAAAAAGTAAA +
Preference number: 5 (lower is better)
Translates to: TRESPCGVGSVRGRTQRQHLILG*SQAKSK
Trigger: TTTACTTTTTGCCTGAGACAAGCCGAGTATGAGGTG...CTGTCGTTGTGTTCTACCCCGTACTGACCCAACACCACAAGGGCTTTCTCTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS-3UTR CAA 90 bp ATAAAAATAACGGGAGGGAAACATGGAAACCGACCTACCTTCCCTAGAAATAAGAATGTGCAGGCTCCTTaGTCAGAAAGCGATTATTGT +
Preference number: 5 (lower is better)
Translates to: IKITGGKHGNRPTFPRNKNVQAP*SESDYC
Trigger: ACAATAATCGCTTTCTGACAAAGGAGCCTGCACATT...CTTATTTCTAGGGAAGGTAGGTCGGTTTCCATGTTTCCCTCCCGTTATTTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS TCA 72 bp GGCCAGAGAGATCACCTGCAGGATATTCGACGTGGGTaGGGGTCACCGGCCGCCATGAAGCGGGGAGCGAGC +
Preference number: 6 (lower is better)
Translates to: GQRDHLQDIRRG*GSPAAMKRGAS
Trigger: GCTCGCTCCCCGCTTCATGGCGGCCGGTGACCCTCACCCACGTCGAATATCCTGCAGGTGATCTCTCTGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS TCA 72 bp AGGATATTCGACGTGGGTGAGGGTCACCGGCCGCCATaGAGCGGGGAGCGAGCACTGTCCGTCCGCTGCCAT +
Preference number: 6 (lower is better)
Translates to: RIFDVGEGHRPP*SGERALSVRCH
Trigger: ATGGCAGCGGACGGACAGTGCTCGCTCCCCGCTTCATGGCGGCCGGTGACCCTCACCCACGTCGAATATCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372546.9
ENST00000406974.7
CDS CCA 72 bp AGGTGGCCAGAGAGATCACCTGCAGGATATTCGACGTaGGTGAGGGTCACCGGCCGCCATGAAGCGGGGAGC +
Preference number: 6 (lower is better)
Translates to: RWPERSPAGYST*VRVTGRHEAGS
Trigger: GCTCCCCGCTTCATGGCGGCCGGTGACCCTCACCCACGTCGAATATCCTGCAGGTGATCTCTCTGGCCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
ENST00000412363.1
CDS GCA 72 bp GGAATGGCTGGAGGGCATCCCGTACTTGGTGCCCACTaGTGTGTGGGGGCCGTGTGCAGCTCCCGCTTAAAT +
Preference number: 6 (lower is better)
Translates to: GMAGGHPVLGAH*CVGAVCSSRLN
Trigger: ATTTAAGCGGGAGCTGCACACGGCCCCCACACAGCAGTGGGCACCAAGTACGGGATGCCCTCCAGCCATTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327812.12
ENST00000412363.1
CDS CAA 72 bp GGGCCTCCACAGGGCCGTGGCTCCTGGATGACGTTTTaGATCAGCCAGTTGACCCCCTCGTTCAGTGCCAGG +
Preference number: 6 (lower is better)
Translates to: GPPQGRGSWMTF*ISQLTPSFSAR
Trigger: CCTGGCACTGAACGAGGGGGTCAACTGGCTGATCAAAAACGTCATCCAGGAGCCACGGCCCTGTGGAGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372546.9
ENST00000406974.7
ENST00000480255.2
CDS CAA 72 bp CACATAAACTGGGAATGGCTGGAGGGCATCCCGTACTaGGTGCCCACTGCTGTGTGGGGGCCGTGTGCAGCT +
Preference number: 6 (lower is better)
Translates to: HINWEWLEGIPY*VPTAVWGPCAA
Trigger: AGCTGCACACGGCCCCCACACAGCAGTGGGCACCAAGTACGGGATGCCCTCCAGCCATTCCCAGTTTATGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327812.12
ENST00000412363.1
CDS CCA 72 bp GCTCAGGTAGGCAAGGAGGTGGCCAGAGAGATCACCTaGCAAGACAGAGAACAGAATCAGGAGGACAGGGCA +
Preference number: 6 (lower is better)
Translates to: AQVGKEVAREIT*QDREQNQEDRA
Trigger: TGCCCTGTCCTCCTGATTCTGTTCTCTGTCTTGCCAGGTGATCTCTCTGGCCACCTCCTTGCCTACCTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480255.2
CDS CCA 72 bp GGGAGAGCACGTGCCTCCACAGCAAGTCCAGGAACCTaGCGTTGTTTGTTTGGTGCATTCTTAAATACAGGA +
Preference number: 6 (lower is better)
Translates to: GRARASTASPGT*RCLFGAFLNTG
Trigger: TCCTGTATTTAAGAATGCACCAAACAAACAACGCCAGGTTCCTGGACTTGCTGTGGAGGCACGTGCTCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS CAA 72 bp CGTGCCTCCACAGCAAGTCCAGGAACCTGGCGTTGTTaGTTTGGTGCATTCTTAAATACAGGAAAAGGAAGG +
Preference number: 6 (lower is better)
Translates to: RASTASPGTWRC*FGAFLNTGKGR
Trigger: CCTTCCTTTTCCTGTATTTAAGAATGCACCAAACAAACAACGCCAGGTTCCTGGACTTGCTGTGGAGGCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7
CDS CAA 72 bp AGCACGTGCCTCCACAGCAAGTCCAGGAACCTGGCGTaGTTTGTTTGGTGCATTCTTAAATACAGGAAAAGG +
Preference number: 6 (lower is better)
Translates to: STCLHSKSRNLA*FVWCILKYRKR
Trigger: CCTTTTCCTGTATTTAAGAATGCACCAAACAAACAACGCCAGGTTCCTGGACTTGCTGTGGAGGCACGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327812.12
ENST00000372546.9
ENST00000406974.7