RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DOK3 (Homo sapiens)

Ensembl gene IDs: ENSG00000146094

Ensembl transcript IDs: ENST00000312943.10, ENST00000357198.9, ENST00000377112.8, ENST00000500323.2, ENST00000501403.6, ENST00000502380.1, ENST00000502885.5, ENST00000506493.5, ENST00000509310.1, ENST00000510380.5, ENST00000510389.1, ENST00000510898.7, ENST00000512660.1

Found 600 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGCCCTGGAGGCATGACGCTTGCGTGCGTGGCTGGCTCCTAGGATaGCGCCAGGAGCAGGAGCAGAGGAGGGAACGCAGCATGGAAGTC +
Preference number: 1 (lower is better)
Translates to: EPWRHDACVRGWLLG*RQEQEQRRERSMEV
Trigger: GACTTCCATGCTGCGTTCCCTCCTCTGCTCCTGCTCCTGGCGCCATCCTAGGAGCCAGCCACGCACGCAAGCGTCATGCCTCCAGGGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR TCA 90 bp GTTCAGGATGTGCCAAGGGTGTGTGCAGCTGAGGTGGAGTTGCGGTaGGGGGCTGGGCAGTCAGAGCCCTGGAGGCATGACGCTTGCGTG +
Preference number: 1 (lower is better)
Translates to: VQDVPRVCAAEVELR*GAGQSEPWRHDACV
Trigger: CACGCAAGCGTCATGCCTCCAGGGCTCTGACTGCCCAGCCCCTCACCGCAACTCCACCTCAGCTGCACACACCCTTGGCACATCCTGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR GCA 90 bp GGCAGAGGCCTCGAAGAGCCAGAAAAGGGTCCCTGCAGGTCGACATaGCTAGGCAGGGGCGGTACTGGCCGCACTAAAGGAAGTGAGCTG +
Preference number: 1 (lower is better)
Translates to: GRGLEEPEKGPCRST*LGRGGTGRTKGSEL
Trigger: CAGCTCACTTCCTTTAGTGCGGCCAGTACCGCCCCTGCCTAGGCATGTCGACCTGCAGGGACCCTTTTCTGGCTCTTCGAGGCCTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR TCA 90 bp GGTGCTTGTGTTGGCCGCAATGAACGTGGGCAGGGGCGTGTGCCGTaGGTGCCCCTGCCGGGAGCTGCTCTGAGCTTTATTATCTGTGAG +
Preference number: 1 (lower is better)
Translates to: GACVGRNERGQGRVP*VPLPGAALSFIICE
Trigger: CTCACAGATAATAAAGCTCAGAGCAGCTCCCGGCAGGGGCACTCACGGCACACGCCCCTGCCCACGTTCATTGCGGCCAACACAAGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR TCA 90 bp TGCTTAAATGGATTTCTCTGGCTGTGGGCAGCTGTGTGCAGGCACTaGGGAGGTCTGGGCTCGCCCAAGGCCGGGGACTTTGCCAGACCA +
Preference number: 1 (lower is better)
Translates to: CLNGFLWLWAAVCRH*GGLGSPKAGDFARP
Trigger: TGGTCTGGCAAAGTCCCCGGCCTTGGGCGAGCCCAGACCTCCTCAGTGCCTGCACACAGCTGCCCACAGCCAGAGAAATCCATTTAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR GCA 90 bp AAGCCTCACAGCTCCCTCCGCCTGCCTCTTCGTGTCACTCGGCCGTaGAGAGCAACATGGAGTCCTAATGATTTCCATCCCGTCTGTCTG +
Preference number: 1 (lower is better)
Translates to: KPHSSLRLPLRVTRP*RATWSPNDFHPVCL
Trigger: CAGACAGACGGGATGGAAATCATTAGGACTCCATGTTGCTCTGCACGGCCGAGTGACACGAAGAGGCAGGCGGAGGGAGCTGTGAGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR CCA 90 bp TCCCTCCGCCTGCCTCTTCGTGTCACTCGGCCGTGCAGAGCAACATaGAGTCCTAATGATTTCCATCCCGTCTGTCTGCTGCAGTGGGTT +
Preference number: 1 (lower is better)
Translates to: SLRLPLRVTRPCRAT*SPNDFHPVCLLQWV
Trigger: AACCCACTGCAGCAGACAGACGGGATGGAAATCATTAGGACTCCATGTTGCTCTGCACGGCCGAGTGACACGAAGAGGCAGGCGGAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR TCA 90 bp GGTCTGGGCTCGCCCAAGGCCGGGGACTTTGCCAGACCAGTAAGATaGAACGAGAGAGAACAGGGGGAAGGGACTATGGAGAACAAAGAG +
Preference number: 1 (lower is better)
Translates to: GLGSPKAGDFARPVR*NEREQGEGTMENKE
Trigger: CTCTTTGTTCTCCATAGTCCCTTCCCCCTGTTCTCTCTCGTTTCATCTTACTGGTCTGGCAAAGTCCCCGGCCTTGGGCGAGCCCAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR GCA 90 bp GCCCTACTAGGGAACAGGGTCTCTTGTGGCAGGGAGTGCCTGCCTTaGACTGTTAAGAAGGATGCAGGCAGTCTGCTTAAATGGATTTCT +
Preference number: 1 (lower is better)
Translates to: ALLGNRVSCGRECLP*TVKKDAGSLLKWIS
Trigger: AGAAATCCATTTAAGCAGACTGCCTGCATCCTTCTTAACAGTGCAAGGCAGGCACTCCCTGCCACAAGAGACCCTGTTCCCTAGTAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR GCA 90 bp AGAAAAGCTGCCCTACTAGGGAACAGGGTCTCTTGTGGCAGGGAGTaGCTGCCTTGCACTGTTAAGAAGGATGCAGGCAGTCTGCTTAAA +
Preference number: 1 (lower is better)
Translates to: RKAALLGNRVSCGRE*LPCTVKKDAGSLLK
Trigger: TTTAAGCAGACTGCCTGCATCCTTCTTAACAGTGCAAGGCAGGCACTCCCTGCCACAAGAGACCCTGTTCCCTAGTAGGGCAGCTTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR GCA 90 bp TTCTACTGTAGGGGTAGGAAGAAGACAGATGGATGCCAGTACACTTaGAGATACGGTGGGAGAGCCCGACCTGTTTCCCCAATATGCCTG +
Preference number: 1 (lower is better)
Translates to: FYCRGRKKTDGCQYT*RYGGRARPVSPICL
Trigger: CAGGCATATTGGGGAAACAGGTCGGGCTCTCCCACCGTATCTGCAAGTGTACTGGCATCCATCTGTCTTCTTCCTACCCCTACAGTAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR GCA 90 bp GACAGACACTGTTTCTACTGTAGGGGTAGGAAGAAGACAGATGGATaGCAGTACACTTGCAGATACGGTGGGAGAGCCCGACCTGTTTCC +
Preference number: 1 (lower is better)
Translates to: DRHCFYCRGRKKTDG*QYTCRYGGRARPVS
Trigger: GGAAACAGGTCGGGCTCTCCCACCGTATCTGCAAGTGTACTGGCATCCATCTGTCTTCTTCCTACCCCTACAGTAGAAACAGTGTCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR CCA 90 bp AGCCTAGGACCCTGGGAAGAACTCAGAGAAGGCAGCAGTAGAGGCTaGGAAGGAGATTGTTATGAGGTAGGAGGAATAGCAAGTAACGGG +
Preference number: 1 (lower is better)
Translates to: SLGPWEELREGSSRG*EGDCYEVGGIASNG
Trigger: CCCGTTACTTGCTATTCCTCCTACCTCATAACAATCTCCTTCCCAGCCTCTACTGCTGCCTTCTCTGAGTTCTTCCCAGGGTCCTAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000510898.7
3UTR CCA 90 bp GAAGTATCTGCAAATTGTTGGAGTTTCAGCAGGGAACAAGTGTTTTaGACGAGGGTGTCTCTGAAATCCCTTCCACCTGCACCCCGCCCC +
Preference number: 1 (lower is better)
Translates to: EVSANCWSFSREQVF*TRVSLKSLPPAPRP
Trigger: GGGGCGGGGTGCAGGTGGAAGGGATTTCAGAGACACCCTCGTCCAAAACACTTGTTCCCTGCTGAAACTCCAACAATTTGCAGATACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR GCA 90 bp CCTTTACAGATGAGGAGACTGACGCCTGGGGTTCCCAGAAGTATCTaGAAATTGTTGGAGTTTCAGCAGGGAACAAGTGTTTTGGACGAG +
Preference number: 1 (lower is better)
Translates to: PLQMRRLTPGVPRSI*KLLEFQQGTSVLDE
Trigger: CTCGTCCAAAACACTTGTTCCCTGCTGAAACTCCAACAATTTGCAGATACTTCTGGGAACCCCAGGCGTCAGTCTCCTCATCTGTAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR TCA 90 bp GAGGTGGCCGAAGAGGAATGTGAGGTCAAGGGAAGGTTTAAAATGTaGAATTACAGAGCATGTTTGCGTGTGGCTGGAAAAGCTGCTGGT +
Preference number: 1 (lower is better)
Translates to: EVAEEECEVKGRFKM*NYRACLRVAGKAAG
Trigger: ACCAGCAGCTTTTCCAGCCACACGCAAACATGCTCTGTAATTTCACATTTTAAACCTTCCCTTGACCTCACATTCCTCTTCGGCCACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR TCA 90 bp GTGGAAATGAAAGTAATCAACAACTCTTTTGAACAGTTTTTGCTGTaGAGAGGAACAGAGAAACAGAGGTGGCCGAAGAGGAATGTGAGG +
Preference number: 1 (lower is better)
Translates to: VEMKVINNSFEQFLL*RGTEKQRWPKRNVR
Trigger: CCTCACATTCCTCTTCGGCCACCTCTGTTTCTCTGTTCCTCTTCACAGCAAAAACTGTTCAAAAGAGTTGTTGATTACTTTCATTTCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR-3UTR CCA 90 bp GGCTGTGGGCAGCTGTGTGCAGGCACTGAGGAGGTCTGGGCTCGCCCAAGGCCGACAAAGAGGGGATGGTaGGCAGAGGCCTCGAAGAGC +
Preference number: 2 (lower is better)
Translates to: GCGQLCAGTEEVWARPRPTKRGW*AEASKS
Trigger: GCTCTTCGAGGCCTCTGCCCACCATCCCCTCTTTGT...CGGCCTTGGGCGAGCCCAGACCTCCTCAGTGCCTGCACACAGCTGCCCACAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR-3UTR GCA 90 bp GGAGGTTCTGGGGAGGAGAAAAGCTGCCCTACTAGGGAACAGGGTCTCTTGTGGGTGGGCAGGGGCGTGTaGCGTGAGTGCCCCTGCCGG +
Preference number: 2 (lower is better)
Translates to: GGSGEEKSCPTREQGLLWVGRGV*RECPCR
Trigger: CCGGCAGGGGCACTCACGGCACACGCCCCTGCCCAC...CCACAAGAGACCCTGTTCCCTAGTAGGGCAGCTTTTCTCCTCCCCAGAACCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR-3UTR CCA 90 bp AAGCCTCACAGCTCCCTCCGCCTGCCTCTTCGTGTCACTCGGCCGTGCAGAGCAGGTCACCTGTGCCCCTaGAACCGGCACAGGGTGCTT +
Preference number: 2 (lower is better)
Translates to: KPHSSLRLPLRVTRPCRAGHLCP*NRHRVL
Trigger: AAGCACCCTGTGCCGGTTCCAGGGGCACAGGTGACC...TGCTCTGCACGGCCGAGTGACACGAAGAGGCAGGCGGAGGGAGCTGTGAGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR-3UTR TCA 90 bp GAGCAGGAGCAGAGGAGGGAACGCAGCATGGAAGTCTTCAGGAAACTTCTCTCCCAGGGGCGTGTGCCGTaGGTGCCCCTGCCGGGAGCT +
Preference number: 2 (lower is better)
Translates to: EQEQRRERSMEVFRKLLSQGRVP*VPLPGA
Trigger: AGCTCCCGGCAGGGGCACTCACGGCACACGCCCCTG...GGAGAGAAGTTTCCTGAAGACTTCCATGCTGCGTTCCCTCCTCTGCTCCTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR-3UTR CCA 90 bp TCTCTTGTGGCAGGGAGTGCCTGCCTTGCACTGTTAAGAAGGATGCAGGCAGTCGGCACTGAGGAGGTCTaGGCTCGCCCAAGGCCGGGG +
Preference number: 2 (lower is better)
Translates to: SLVAGSACLALLRRMQAVGTEEV*ARPRPG
Trigger: CCCCGGCCTTGGGCGAGCCCAGACCTCCTCAGTGCC...GACTGCCTGCATCCTTCTTAACAGTGCAAGGCAGGCACTCCCTGCCACAAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR-3UTR TCA 90 bp GGAGGTTCTGGGGAGGAGAAAAGCTGCCCTACTAGGGAACAGGGTCTCTTGTGGCTGCTGCAGTGGGTTTaGGCCCACGGGTGGCAGGTA +
Preference number: 2 (lower is better)
Translates to: GGSGEEKSCPTREQGLLWLLQWV*AHGWQV
Trigger: TACCTGCCACCCGTGGGCTCAAACCCACTGCAGCAG...CCACAAGAGACCCTGTTCCCTAGTAGGGCAGCTTTTCTCCTCCCCAGAACCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR-3UTR GCA 90 bp GGCTGTGGGCAGCTGTGTGCAGGCACTGAGGAGGTCTGGGCTCGCCCAAGGCCGATTACAGAGCATGTTTaGGTGTGGCTGGAAAAGCTG +
Preference number: 2 (lower is better)
Translates to: GCGQLCAGTEEVWARPRPITEHV*VWLEKL
Trigger: CAGCTTTTCCAGCCACACGCAAACATGCTCTGTAAT...CGGCCTTGGGCGAGCCCAGACCTCCTCAGTGCCTGCACACAGCTGCCCACAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR-3UTR GCA 90 bp GCTGCCCTACTAGGGAACAGGGTCTCTTGTGGCAGGGAGTGCCTGCCTTGCACTGCCCCTGCCGGGAGCTaGTCTGAGCTTTATTATCTG +
Preference number: 2 (lower is better)
Translates to: AALLGNRVSCGRECLPCTAPAGS*SELYYL
Trigger: CAGATAATAAAGCTCAGAGCAGCTCCCGGCAGGGGC...AGTGCAAGGCAGGCACTCCCTGCCACAAGAGACCCTGTTCCCTAGTAGGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR-3UTR TCA 90 bp TCTCTTGTGGCAGGGAGTGCCTGCCTTGCACTGTTAAGAAGGATGCAGGCAGTCTTGTGTTGGCCGCAATaGACGTGGGCAGGGGCGTGT +
Preference number: 2 (lower is better)
Translates to: SLVAGSACLALLRRMQAVLCWPQ*TWAGAC
Trigger: ACACGCCCCTGCCCACGTTCATTGCGGCCAACACAA...GACTGCCTGCATCCTTCTTAACAGTGCAAGGCAGGCACTCCCTGCCACAAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR-3UTR GCA 90 bp GGGATCAGAGCACAGCTGGGGACAGACACTGTTTCTACTGTAGGGGTAGGAAGAGGCCTGCCTTGTTCCTaGAGGCCAGGGTGGACACAG +
Preference number: 2 (lower is better)
Translates to: GIRAQLGTDTVSTVGVGRGLPCS*RPGWTQ
Trigger: CTGTGTCCACCCTGGCCTGCAGGAACAAGGCAGGCC...TCTTCCTACCCCTACAGTAGAAACAGTGTCTGTCCCCAGCTGTGCTCTGATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR-3UTR GCA 90 bp GGCTTTCAGGAGATTCTTTGTGTAGCAGGGTTGAGCTACACTACATCTGAGCCTGGCGTGTGCCGTGAGTaGCCCTGCCGGGAGCTGCTC +
Preference number: 2 (lower is better)
Translates to: GFQEILCVAGLSYTTSEPGVCRE*PCRELL
Trigger: GAGCAGCTCCCGGCAGGGGCACTCACGGCACACGCC...AGGCTCAGATGTAGTGTAGCTCAACCCTGCTACACAAAGAATCTCCTGAAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR-3UTR GCA 90 bp GAAGGGACTATGGAGAACAAAGAGGGGATGGTGGGCAGAGGCCTCGAAGAGCCACGTGTCACTCGGCCGTaGAGAGCAACATGGAGTCCT +
Preference number: 2 (lower is better)
Translates to: EGTMENKEGMVGRGLEEPRVTRP*RATWSP
Trigger: AGGACTCCATGTTGCTCTGCACGGCCGAGTGACACG...TGGCTCTTCGAGGCCTCTGCCCACCATCCCCTCTTTGTTCTCCATAGTCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR-3UTR CCA 90 bp GGAGAGCCCGACCTGTTTCCCCAATATGCCTGTGAGGAGACATTGGGTGGGGATACAAAGAGGGGATGGTaGGCAGAGGCCTCGAAGAGC +
Preference number: 2 (lower is better)
Translates to: GEPDLFPQYACEETLGGDTKRGW*AEASKS
Trigger: GCTCTTCGAGGCCTCTGCCCACCATCCCCTCTTTGT...ATCCCCACCCAATGTCTCCTCACAGGCATATTGGGGAAACAGGTCGGGCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR-3UTR CCA 90 bp GCACTGTTAAGAAGGATGCAGGCAGTCTGCTTAAATGGATTTCTCTGGCTGTGGGGCACTGAGGAGGTCTaGGCTCGCCCAAGGCCGGGG +
Preference number: 2 (lower is better)
Translates to: ALLRRMQAVCLNGFLWLWGTEEV*ARPRPG
Trigger: CCCCGGCCTTGGGCGAGCCCAGACCTCCTCAGTGCC...CCACAGCCAGAGAAATCCATTTAAGCAGACTGCCTGCATCCTTCTTAACAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR-3UTR GCA 90 bp GGAGGTTCTGGGGAGGAGAAAAGCTGCCCTACTAGGGAACAGGGTCTCTTGTGGGGGGAGGAGAAAAGCTaGCCTACTAGGGAACAGGGT +
Preference number: 2 (lower is better)
Translates to: GGSGEEKSCPTREQGLLWGEEKS*PTREQG
Trigger: ACCCTGTTCCCTAGTAGGGCAGCTTTTCTCCTCCCC...CCACAAGAGACCCTGTTCCCTAGTAGGGCAGCTTTTCTCCTCCCCAGAACCTCC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR-3UTR CCA 90 bp GAGCAGGAGCAGAGGAGGGAACGCAGCATGGAAGTCTTCAGGAAACTTCTCTCCGAACAGGGTCTCTTGTaGCAGGGAGTGCCTGCCTTG +
Preference number: 2 (lower is better)
Translates to: EQEQRRERSMEVFRKLLSEQGLL*QGVPAL
Trigger: CAAGGCAGGCACTCCCTGCCACAAGAGACCCTGTTC...GGAGAGAAGTTTCCTGAAGACTTCCATGCTGCGTTCCCTCCTCTGCTCCTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR-3UTR TCA 90 bp GAGCAGAGGAGGGAACGCAGCATGGAAGTCTTCAGGAAACTTCTCTCCCCCTGGGCCAGACCAGTAAGATaGAACGAGAGAGAACAGGGG +
Preference number: 2 (lower is better)
Translates to: EQRRERSMEVFRKLLSPWARPVR*NEREQG
Trigger: CCCCTGTTCTCTCTCGTTTCATCTTACTGGTCTGGC...CCAGGGGGAGAGAAGTTTCCTGAAGACTTCCATGCTGCGTTCCCTCCTCTGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR-3UTR TCA 90 bp CAGATACGGTGGGAGAGCCCGACCTGTTTCCCCAATATGCCTGTGAGGAGACATTCCCCAATATGCCTGTaGGGAGACATTGGGTGGGGA +
Preference number: 2 (lower is better)
Translates to: QIRWESPTCFPNMPVRRHSPICL*GDIGWG
Trigger: TCCCCACCCAATGTCTCCTCACAGGCATATTGGGGA...ATGTCTCCTCACAGGCATATTGGGGAAACAGGTCGGGCTCTCCCACCGTATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR-3UTR TCA 90 bp GGTAGGATGAATGGGCGCAGGAGAGAGTGGGGACAGCTCAATTTTCCAAGCTCTTCTGCACACTATTCATaGGGAGGGCAGGGCAGGGCT +
Preference number: 2 (lower is better)
Translates to: GRMNGRRREWGQLNFPSSSAHYS*GGQGRA
Trigger: AGCCCTGCCCTGCCCTCCTCATGAATAGTGTGCAGA...AGAGCTTGGAAAATTGAGCTGTCCCCACTCTCTCCTGCGCCCATTCATCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR-3UTR TCA 90 bp ACTATGGAGAACAAAGAGGGGATGGTGGGCAGAGGCCTCGAAGAGCCAGAAAAGGGACGAGGGTGTCTCTaGAATCCCTTCCACCTGCAC +
Preference number: 2 (lower is better)
Translates to: TMENKEGMVGRGLEEPEKGRGCL*NPFHLH
Trigger: GTGCAGGTGGAAGGGATTTCAGAGACACCCTCGTCC...CTTTTCTGGCTCTTCGAGGCCTCTGCCCACCATCCCCTCTTTGTTCTCCATAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR-3UTR GCA 90 bp GGGGACAGACACTGTTTCTACTGTAGGGGTAGGAAGAAGACAGATGGATGCCAGCATGGGCCCAATGTTTaGCCACCAGCCCACCCTCCT +
Preference number: 2 (lower is better)
Translates to: GDRHCFYCRGRKKTDGCQHGPNV*PPAHPP
Trigger: AGGAGGGTGGGCTGGTGGGCAAACATTGGGCCCATG...CTGGCATCCATCTGTCTTCTTCCTACCCCTACAGTAGAAACAGTGTCTGTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR-3UTR GCA 90 bp ACTATGGAGAACAAAGAGGGGATGGTGGGCAGAGGCCTCGAAGAGCCAGAAAAGATCCCGTCTGTCTGCTaGAGTGGGTTTGAGCCCACG +
Preference number: 2 (lower is better)
Translates to: TMENKEGMVGRGLEEPEKIPSVC*SGFEPT
Trigger: CGTGGGCTCAAACCCACTGCAGCAGACAGACGGGAT...CTTTTCTGGCTCTTCGAGGCCTCTGCCCACCATCCCCTCTTTGTTCTCCATAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR-3UTR CCA 90 bp GGTTCTGGGGAGGAGAAAAGCTGCCCTACTAGGGAACAGGGTCTCTTGTGGCAGAGGGGGAAGGGACTATaGAGAACAAAGAGGGGATGG +
Preference number: 2 (lower is better)
Translates to: GSGEEKSCPTREQGLLWQRGKGL*RTKRGW
Trigger: CCATCCCCTCTTTGTTCTCCATAGTCCCTTCCCCCT...CTGCCACAAGAGACCCTGTTCCCTAGTAGGGCAGCTTTTCTCCTCCCCAGAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR-3UTR TCA 90 bp CAGAGCCGAGTGCTGCTGAGAAGTCAAAGTCCTTGTTGCTTTTGTTTTGGAGAAAGAGCCCTGGAGGCATaGCGCTTGCGTGCGTGGCTG +
Preference number: 2 (lower is better)
Translates to: QSRVLLRSQSPCCFCFGERALEA*RLRAWL
Trigger: CAGCCACGCACGCAAGCGTCATGCCTCCAGGGCTCT...TTCTCCAAAACAAAAGCAACAAGGACTTTGACTTCTCAGCAGCACTCGGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR-3UTR GCA 90 bp GGGATCAGAGCACAGCTGGGGACAGACACTGTTTCTACTGTAGGGGTAGGAAGAGTGGCAGGGAGTGCCTaGCTTGCACTGTTAAGAAGG +
Preference number: 2 (lower is better)
Translates to: GIRAQLGTDTVSTVGVGRVAGSA*LALLRR
Trigger: CCTTCTTAACAGTGCAAGGCAGGCACTCCCTGCCAC...TCTTCCTACCCCTACAGTAGAAACAGTGTCTGTCCCCAGCTGTGCTCTGATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR-3UTR GCA 90 bp ACTATGGAGAACAAAGAGGGGATGGTGGGCAGAGGCCTCGAAGAGCCAGAAAAGGGGGAGGAGAAAAGCTaGCCTACTAGGGAACAGGGT +
Preference number: 2 (lower is better)
Translates to: TMENKEGMVGRGLEEPEKGEEKS*PTREQG
Trigger: ACCCTGTTCCCTAGTAGGGCAGCTTTTCTCCTCCCC...CTTTTCTGGCTCTTCGAGGCCTCTGCCCACCATCCCCTCTTTGTTCTCCATAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR-3UTR CCA 90 bp ACTATGGAGAACAAAGAGGGGATGGTGGGCAGAGGCCTCGAAGAGCCAGAAAAGCTAAAGGAAGTGAGCTaGAAGGAGGTGGCGGCCAGA +
Preference number: 2 (lower is better)
Translates to: TMENKEGMVGRGLEEPEKLKEVS*KEVAAR
Trigger: TCTGGCCGCCACCTCCTTCCAGCTCACTTCCTTTAG...CTTTTCTGGCTCTTCGAGGCCTCTGCCCACCATCCCCTCTTTGTTCTCCATAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR-3UTR CCA 90 bp AGAGGAACAGAGAAACAGAGGTGGCCGAAGAGGAATGTGAGGTCAAGGGAAGGTGAACAGGGTCTCTTGTaGCAGGGAGTGCCTGCCTTG +
Preference number: 2 (lower is better)
Translates to: RGTEKQRWPKRNVRSREGEQGLL*QGVPAL
Trigger: CAAGGCAGGCACTCCCTGCCACAAGAGACCCTGTTC...ACCTTCCCTTGACCTCACATTCCTCTTCGGCCACCTCTGTTTCTCTGTTCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR-3UTR CCA 90 bp GGCTTTCAGGAGATTCTTTGTGTAGCAGGGTTGAGCTACACTACATCTGAGCCTGGGCAGTCAGAGCCCTaGAGGCATGACGCTTGCGTG +
Preference number: 2 (lower is better)
Translates to: GFQEILCVAGLSYTTSEPGQSEP*RHDACV
Trigger: CACGCAAGCGTCATGCCTCCAGGGCTCTGACTGCCC...AGGCTCAGATGTAGTGTAGCTCAACCCTGCTACACAAAGAATCTCCTGAAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR-3UTR TCA 90 bp GGGGACAGACACTGTTTCTACTGTAGGGGTAGGAAGAAGACAGATGGATGCCAGTCCCCAATATGCCTGTaGGGAGACATTGGGTGGGGA +
Preference number: 2 (lower is better)
Translates to: GDRHCFYCRGRKKTDGCQSPICL*GDIGWG
Trigger: TCCCCACCCAATGTCTCCTCACAGGCATATTGGGGA...CTGGCATCCATCTGTCTTCTTCCTACCCCTACAGTAGAAACAGTGTCTGTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR-3UTR TCA 90 bp GGAAGGAGGTGGCGGCCAGAGGATGAGGCTTGGACAGGAGAGAGCAAAAATTGTCAATTTTCCAAGCTCTaGGGTGAAAGGAGCCGGGAT +
Preference number: 2 (lower is better)
Translates to: GRRWRPEDEAWTGESKNCQFSKL*GERSRD
Trigger: ATCCCGGCTCCTTTCACCTCAGAGCTTGGAAAATTG...ACAATTTTTGCTCTCTCCTGTCCAAGCCTCATCCTCTGGCCGCCACCTCCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR-3UTR TCA 90 bp TTTCAAGAACCAGAGCCGAGTGCTGCTGAGAAGTCAAAGTCCTTGTTGCTTTTGCCCAGCGCCTGGCACTaGGTAGGCACGCAGCAAACT +
Preference number: 2 (lower is better)
Translates to: FQEPEPSAAEKSKSLLLLPSAWH*VGTQQT
Trigger: AGTTTGCTGCGTGCCTACTCAGTGCCAGGCGCTGGG...CAAAAGCAACAAGGACTTTGACTTCTCAGCAGCACTCGGCTCTGGTTCTTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR-3UTR CCA 90 bp ATGCAGGCAGTCTGCTTAAATGGATTTCTCTGGCTGTGGGCAGCTGTGTGCAGGAGGGGGAAGGGACTATaGAGAACAAAGAGGGGATGG +
Preference number: 2 (lower is better)
Translates to: MQAVCLNGFLWLWAAVCRRGKGL*RTKRGW
Trigger: CCATCCCCTCTTTGTTCTCCATAGTCCCTTCCCCCT...CCTGCACACAGCTGCCCACAGCCAGAGAAATCCATTTAAGCAGACTGCCTGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR-3UTR CCA 90 bp GGACAGCTCAATTTTCCAAGCTCTGAGGTGAAAGGAGCCGGGATCAGAGCACAGAGGGGGAAGGGACTATaGAGAACAAAGAGGGGATGG +
Preference number: 2 (lower is better)
Translates to: GQLNFPSSEVKGAGIRAQRGKGL*RTKRGW
Trigger: CCATCCCCTCTTTGTTCTCCATAGTCCCTTCCCCCT...CTGTGCTCTGATCCCGGCTCCTTTCACCTCAGAGCTTGGAAAATTGAGCTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR-3UTR CCA 90 bp ACTATGGAGAACAAAGAGGGGATGGTGGGCAGAGGCCTCGAAGAGCCAGAAAAGATAGACAGGAGGTTCTaGGGAGGAGAAAAGCTGCCC +
Preference number: 2 (lower is better)
Translates to: TMENKEGMVGRGLEEPEKIDRRF*GGEKLP
Trigger: GGGCAGCTTTTCTCCTCCCCAGAACCTCCTGTCTAT...CTTTTCTGGCTCTTCGAGGCCTCTGCCCACCATCCCCTCTTTGTTCTCCATAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR-3UTR TCA 90 bp GGACAGCTCAATTTTCCAAGCTCTGAGGTGAAAGGAGCCGGGATCAGAGCACAGAGAGCCGAGTGCTGCTaGGAAGTCAAAGTCCTTGTT +
Preference number: 2 (lower is better)
Translates to: GQLNFPSSEVKGAGIRAQRAECC*EVKVLV
Trigger: AACAAGGACTTTGACTTCTCAGCAGCACTCGGCTCT...CTGTGCTCTGATCCCGGCTCCTTTCACCTCAGAGCTTGGAAAATTGAGCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR-3UTR CCA 90 bp TCTTGTGGCAGGGAGTGCCTGCCTTGCACTGTTAAGAAGGATGCAGGCAGTCTGCCAGAGGATGAGGCTTaGACAGGAGAGAGCAAAAAT +
Preference number: 2 (lower is better)
Translates to: SCGRECLPCTVKKDAGSLPEDEA*TGESKN
Trigger: ATTTTTGCTCTCTCCTGTCCAAGCCTCATCCTCTGG...CAGACTGCCTGCATCCTTCTTAACAGTGCAAGGCAGGCACTCCCTGCCACAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR-3UTR CCA 90 bp GGCTTTCAGGAGATTCTTTGTGTAGCAGGGTTGAGCTACACTACATCTGAGCCTACAAAGAGGGGATGGTaGGCAGAGGCCTCGAAGAGC +
Preference number: 2 (lower is better)
Translates to: GFQEILCVAGLSYTTSEPTKRGW*AEASKS
Trigger: GCTCTTCGAGGCCTCTGCCCACCATCCCCTCTTTGT...AGGCTCAGATGTAGTGTAGCTCAACCCTGCTACACAAAGAATCTCCTGAAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000510898.7
3UTR-3UTR CCA 90 bp CAGATACGGTGGGAGAGCCCGACCTGTTTCCCCAATATGCCTGTGAGGAGACATTTAAATGGATTTCTCTaGCTGTGGGCAGCTGTGTGC +
Preference number: 2 (lower is better)
Translates to: QIRWESPTCFPNMPVRRHLNGFL*LWAAVC
Trigger: GCACACAGCTGCCCACAGCCAGAGAAATCCATTTAA...ATGTCTCCTCACAGGCATATTGGGGAAACAGGTCGGGCTCTCCCACCGTATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR-3UTR CCA 90 bp GGTTCTGGGGAGGAGAAAAGCTGCCCTACTAGGGAACAGGGTCTCTTGTGGCAGAGGGAACAAGTGTTTTaGACGAGGGTGTCTCTGAAA +
Preference number: 2 (lower is better)
Translates to: GSGEEKSCPTREQGLLWQREQVF*TRVSLK
Trigger: TTTCAGAGACACCCTCGTCCAAAACACTTGTTCCCT...CTGCCACAAGAGACCCTGTTCCCTAGTAGGGCAGCTTTTCTCCTCCCCAGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR CAA 90 bp AGAAGTATCTGCAAATTGTTGGAGTTTCAGCAGGGAACAAGTGTTTaGGACGAGGGTGTCTCTGAAATCCCTTCCACCTGCACCCCGCCC +
Preference number: 2 (lower is better)
Translates to: RSICKLLEFQQGTSV*DEGVSEIPSTCTPP
Trigger: GGGCGGGGTGCAGGTGGAAGGGATTTCAGAGACACCCTCGTCCAAAACACTTGTTCCCTGCTGAAACTCCAACAATTTGCAGATACTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR CAA 90 bp CAGATGAGGAGACTGACGCCTGGGGTTCCCAGAAGTATCTGCAAATaGTTGGAGTTTCAGCAGGGAACAAGTGTTTTGGACGAGGGTGTC +
Preference number: 2 (lower is better)
Translates to: QMRRLTPGVPRSICK*LEFQQGTSVLDEGV
Trigger: GACACCCTCGTCCAAAACACTTGTTCCCTGCTGAAACTCCAACAATTTGCAGATACTTCTGGGAACCCCAGGCGTCAGTCTCCTCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR-3UTR TCA 90 bp GGCTTTCAGGAGATTCTTTGTGTAGCAGGGTTGAGCTACACTACATCTGAGCCTTTCCAAGCTCTGAGGTaGAAGGAGCCGGGATCAGAG +
Preference number: 2 (lower is better)
Translates to: GFQEILCVAGLSYTTSEPFQALR*KEPGSE
Trigger: CTCTGATCCCGGCTCCTTTCACCTCAGAGCTTGGAA...AGGCTCAGATGTAGTGTAGCTCAACCCTGCTACACAAAGAATCTCCTGAAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000510898.7
3UTR CAA 90 bp ATGAGGAGACTGACGCCTGGGGTTCCCAGAAGTATCTGCAAATTGTaGGAGTTTCAGCAGGGAACAAGTGTTTTGGACGAGGGTGTCTCT +
Preference number: 2 (lower is better)
Translates to: MRRLTPGVPRSICKL*EFQQGTSVLDEGVS
Trigger: AGAGACACCCTCGTCCAAAACACTTGTTCCCTGCTGAAACTCCAACAATTTGCAGATACTTCTGGGAACCCCAGGCGTCAGTCTCCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR-3UTR TCA 90 bp GCACTGTTAAGAAGGATGCAGGCAGTCTGCTTAAATGGATTTCTCTGGCTGTGGGCCAGACCAGTAAGATaGAACGAGAGAGAACAGGGG +
Preference number: 2 (lower is better)
Translates to: ALLRRMQAVCLNGFLWLWARPVR*NEREQG
Trigger: CCCCTGTTCTCTCTCGTTTCATCTTACTGGTCTGGC...CCACAGCCAGAGAAATCCATTTAAGCAGACTGCCTGCATCCTTCTTAACAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR-3UTR GCA 90 bp AGTGCCTGCCTTGCACTGTTAAGAAGGATGCAGGCAGTCTGCTTAAATGGATTTACACAGGCGTGTGTCTaGATGGGCCCAATGTTTGCC +
Preference number: 2 (lower is better)
Translates to: SACLALLRRMQAVCLNGFTQACV*MGPMFA
Trigger: GGCAAACATTGGGCCCATGCAGACACACGCCTGTGT...AAATCCATTTAAGCAGACTGCCTGCATCCTTCTTAACAGTGCAAGGCAGGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR-3UTR CCA 90 bp AGTGCCTGCCTTGCACTGTTAAGAAGGATGCAGGCAGTCTGCTTAAATGGATTTCTAAAGGAAGTGAGCTaGAAGGAGGTGGCGGCCAGA +
Preference number: 2 (lower is better)
Translates to: SACLALLRRMQAVCLNGFLKEVS*KEVAAR
Trigger: TCTGGCCGCCACCTCCTTCCAGCTCACTTCCTTTAG...AAATCCATTTAAGCAGACTGCCTGCATCCTTCTTAACAGTGCAAGGCAGGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR-3UTR CCA 90 bp AGATCACTCACAGAACATGCATGGACATTTTTACAGGCTTTCAGGAGATTCTTTGCTTGCGTGCGTGGCTaGCTCCTAGGATGGCGCCAG +
Preference number: 2 (lower is better)
Translates to: RSLTEHAWTFLQAFRRFFACVRG*LLGWRQ
Trigger: CTGGCGCCATCCTAGGAGCCAGCCACGCACGCAAGC...AAAGAATCTCCTGAAAGCCTGTAAAAATGTCCATGCATGTTCTGTGAGTGATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR-3UTR GCA 90 bp AACCAGAGCCGAGTGCTGCTGAGAAGTCAAAGTCCTTGTTGCTTTTGTTTTGGATCTTGTGGCAGGGAGTaGCTGCCTTGCACTGTTAAG +
Preference number: 2 (lower is better)
Translates to: NQSRVLLRSQSPCCFCFGSCGRE*LPCTVK
Trigger: CTTAACAGTGCAAGGCAGGCACTCCCTGCCACAAGA...TCCAAAACAAAAGCAACAAGGACTTTGACTTCTCAGCAGCACTCGGCTCTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR-3UTR GCA 90 bp CAGAGCCGAGTGCTGCTGAGAAGTCAAAGTCCTTGTTGCTTTTGTTTTGGAGAAAGGGAGTGCCTGCCTTaGACTGTTAAGAAGGATGCA +
Preference number: 2 (lower is better)
Translates to: QSRVLLRSQSPCCFCFGERECLP*TVKKDA
Trigger: TGCATCCTTCTTAACAGTGCAAGGCAGGCACTCCCT...TTCTCCAAAACAAAAGCAACAAGGACTTTGACTTCTCAGCAGCACTCGGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR-3UTR CCA 90 bp AGGTGGCCGAAGAGGAATGTGAGGTCAAGGGAAGGTTTAAAATGTGAAATTACACTAAAGGAAGTGAGCTaGAAGGAGGTGGCGGCCAGA +
Preference number: 2 (lower is better)
Translates to: RWPKRNVRSREGLKCEITLKEVS*KEVAAR
Trigger: TCTGGCCGCCACCTCCTTCCAGCTCACTTCCTTTAG...TGTAATTTCACATTTTAAACCTTCCCTTGACCTCACATTCCTCTTCGGCCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR-3UTR CCA 90 bp AGGTGGCCGAAGAGGAATGTGAGGTCAAGGGAAGGTTTAAAATGTGAAATTACACCTGTGAGGAGACATTaGGTGGGGATAGACAGGAGG +
Preference number: 2 (lower is better)
Translates to: RWPKRNVRSREGLKCEITPVRRH*VGIDRR
Trigger: CCTCCTGTCTATCCCCACCCAATGTCTCCTCACAGG...TGTAATTTCACATTTTAAACCTTCCCTTGACCTCACATTCCTCTTCGGCCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR-3UTR CCA 90 bp GGTAGGATGAATGGGCGCAGGAGAGAGTGGGGACAGCTCAATTTTCCAAGCTCTCTCACAGAACATGCATaGACATTTTTACAGGCTTTC +
Preference number: 2 (lower is better)
Translates to: GRMNGRRREWGQLNFPSSLTEHA*TFLQAF
Trigger: GAAAGCCTGTAAAAATGTCCATGCATGTTCTGTGAG...AGAGCTTGGAAAATTGAGCTGTCCCCACTCTCTCCTGCGCCCATTCATCCTACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000510898.7
3UTR CAA 90 bp ATGGACATTTTTACAGGCTTTCAGGAGATTCTTTGTGTAGCAGGGTaGAGCTACACTACATCTGAGCCTAGGACCCTGGGAAGAACTCAG +
Preference number: 2 (lower is better)
Translates to: MDIFTGFQEILCVAG*SYTTSEPRTLGRTQ
Trigger: CTGAGTTCTTCCCAGGGTCCTAGGCTCAGATGTAGTGTAGCTCAACCCTGCTACACAAAGAATCTCCTGAAAGCCTGTAAAAATGTCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000510898.7
3UTR-3UTR TCA 90 bp AGTGCTGCTGAGAAGTCAAAGTCCTTGTTGCTTTTGTTTTGGAGAATAAGGTTGTCCCCAATATGCCTGTaGGGAGACATTGGGTGGGGA +
Preference number: 2 (lower is better)
Translates to: SAAEKSKSLLLLFWRIRLSPICL*GDIGWG
Trigger: TCCCCACCCAATGTCTCCTCACAGGCATATTGGGGA...CAACCTTATTCTCCAAAACAAAAGCAACAAGGACTTTGACTTCTCAGCAGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR-3UTR CCA 90 bp TTTCAAGAACCAGAGCCGAGTGCTGCTGAGAAGTCAAAGTCCTTGTTGCTTTTGTTAAATGGATTTCTCTaGCTGTGGGCAGCTGTGTGC +
Preference number: 2 (lower is better)
Translates to: FQEPEPSAAEKSKSLLLLLNGFL*LWAAVC
Trigger: GCACACAGCTGCCCACAGCCAGAGAAATCCATTTAA...CAAAAGCAACAAGGACTTTGACTTCTCAGCAGCACTCGGCTCTGGTTCTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR-3UTR TCA 90 bp AGGTGGCCGAAGAGGAATGTGAGGTCAAGGGAAGGTTTAAAATGTGAAATTACACAATTTTCCAAGCTCTaGGGTGAAAGGAGCCGGGAT +
Preference number: 2 (lower is better)
Translates to: RWPKRNVRSREGLKCEITQFSKL*GERSRD
Trigger: ATCCCGGCTCCTTTCACCTCAGAGCTTGGAAAATTG...TGTAATTTCACATTTTAAACCTTCCCTTGACCTCACATTCCTCTTCGGCCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR-3UTR CCA 90 bp AGTGCTGCTGAGAAGTCAAAGTCCTTGTTGCTTTTGTTTTGGAGAATAAGGTTGATAGACAGGAGGTTCTaGGGAGGAGAAAAGCTGCCC +
Preference number: 2 (lower is better)
Translates to: SAAEKSKSLLLLFWRIRLIDRRF*GGEKLP
Trigger: GGGCAGCTTTTCTCCTCCCCAGAACCTCCTGTCTAT...CAACCTTATTCTCCAAAACAAAAGCAACAAGGACTTTGACTTCTCAGCAGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR-3UTR CCA 90 bp TTCTTGGTAGATCACTCACAGAACATGCATGGACATTTTTACAGGCTTTCAGGAGGCAGCAGTAGAGGCTaGGAAGGAGATTGTTATGAG +
Preference number: 2 (lower is better)
Translates to: FLVDHSQNMHGHFYRLSGGSSRG*EGDCYE
Trigger: CTCATAACAATCTCCTTCCCAGCCTCTACTGCTGCC...TCCTGAAAGCCTGTAAAAATGTCCATGCATGTTCTGTGAGTGATCTACCAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000510898.7
3UTR-3UTR CCA 90 bp CAGAGCCGAGTGCTGCTGAGAAGTCAAAGTCCTTGTTGCTTTTGTTTTGGAGAACTCACAGAACATGCATaGACATTTTTACAGGCTTTC +
Preference number: 2 (lower is better)
Translates to: QSRVLLRSQSPCCFCFGELTEHA*TFLQAF
Trigger: GAAAGCCTGTAAAAATGTCCATGCATGTTCTGTGAG...TTCTCCAAAACAAAAGCAACAAGGACTTTGACTTCTCAGCAGCACTCGGCTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000510898.7
3UTR-3UTR CCA 90 bp GAGAATGGGGGTGAGAAAGTGGAAATGAAAGTAATCAACAACTCTTTTGAACAGCCAGAGGATGAGGCTTaGACAGGAGAGAGCAAAAAT +
Preference number: 2 (lower is better)
Translates to: ENGGEKVEMKVINNSFEQPEDEA*TGESKN
Trigger: ATTTTTGCTCTCTCCTGTCCAAGCCTCATCCTCTGG...CTGTTCAAAAGAGTTGTTGATTACTTTCATTTCCACTTTCTCACCCCCATTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR CAA 90 bp GTGTTTCAAGAACCAGAGCCGAGTGCTGCTGAGAAGTCAAAGTCCTaGTTGCTTTTGTTTTGGAGAATAAGGTTGGTGACTCTAATAAAA +
Preference number: 2 (lower is better)
Translates to: VFQEPEPSAAEKSKS*LLLFWRIRLVTLIK
Trigger: TTTTATTAGAGTCACCAACCTTATTCTCCAAAACAAAAGCAACAAGGACTTTGACTTCTCAGCAGCACTCGGCTCTGGTTCTTGAAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR-3UTR CCA 90 bp AGATCACTCACAGAACATGCATGGACATTTTTACAGGCTTTCAGGAGATTCTTTCCGTGCAGAGCAACATaGAGTCCTAATGATTTCCAT +
Preference number: 2 (lower is better)
Translates to: RSLTEHAWTFLQAFRRFFPCRAT*SPNDFH
Trigger: ATGGAAATCATTAGGACTCCATGTTGCTCTGCACGG...AAAGAATCTCCTGAAAGCCTGTAAAAATGTCCATGCATGTTCTGTGAGTGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR-3UTR CCA 90 bp AGATCACTCACAGAACATGCATGGACATTTTTACAGGCTTTCAGGAGATTCTTTTTGTTGCTTTTGTTTTaGAGAATAAGGTTGGTGACT +
Preference number: 2 (lower is better)
Translates to: RSLTEHAWTFLQAFRRFFLLLLF*RIRLVT
Trigger: AGTCACCAACCTTATTCTCCAAAACAAAAGCAACAA...AAAGAATCTCCTGAAAGCCTGTAAAAATGTCCATGCATGTTCTGTGAGTGATCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000510898.7
3UTR CCA 72 bp GGCTGTGGGCAGCTGTGTGCAGGCACTGAGGAGGTCTaGGCTCGCCCAAGGCCGGGGACTTTGCCAGACCAG +
Preference number: 3 (lower is better)
Translates to: GCGQLCAGTEEV*ARPRPGTLPDQ
Trigger: CTGGTCTGGCAAAGTCCCCGGCCTTGGGCGAGCCCAGACCTCCTCAGTGCCTGCACACAGCTGCCCACAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR TCA 72 bp CCTGGAACCGGCACAGGGTGCTTGTGTTGGCCGCAATaGACGTGGGCAGGGGCGTGTGCCGTGAGTGCCCCT +
Preference number: 3 (lower is better)
Translates to: PGTGTGCLCWPQ*TWAGACAVSAP
Trigger: AGGGGCACTCACGGCACACGCCCCTGCCCACGTTCATTGCGGCCAACACAAGCACCCTGTGCCGGTTCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR CCA 72 bp TCAGAGCCCTGGAGGCATGACGCTTGCGTGCGTGGCTaGCTCCTAGGATGGCGCCAGGAGCAGGAGCAGAGG +
Preference number: 3 (lower is better)
Translates to: SEPWRHDACVRG*LLGWRQEQEQR
Trigger: CCTCTGCTCCTGCTCCTGGCGCCATCCTAGGAGCCAGCCACGCACGCAAGCGTCATGCCTCCAGGGCTCTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR TCA 72 bp GTTGGCCGCAATGAACGTGGGCAGGGGCGTGTGCCGTaGGTGCCCCTGCCGGGAGCTGCTCTGAGCTTTATT +
Preference number: 3 (lower is better)
Translates to: VGRNERGQGRVP*VPLPGAALSFI
Trigger: AATAAAGCTCAGAGCAGCTCCCGGCAGGGGCACTCACGGCACACGCCCCTGCCCACGTTCATTGCGGCCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR TCA 72 bp AATGTCGGCTCCCGGAGAACAGGACCAAGGCTGTCCTaGACACGGCTGTGTCCCCCAGCGCCTGGCACTGAG +
Preference number: 3 (lower is better)
Translates to: NVGSRRTGPRLS*TRLCPPAPGTE
Trigger: CTCAGTGCCAGGCGCTGGGGGACACAGCCGTGTTCAGGACAGCCTTGGTCCTGTTCTCCGGGAGCCGACATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR-3UTR CAA 90 bp AGGGGCGGTACTGGCCGCACTAAAGGAAGTGAGCTGGAAGGAGGTGGCGGCCAGGCCTGTGAGGAGACATaGGGTGGGGATAGACAGGAG +
Preference number: 3 (lower is better)
Translates to: RGGTGRTKGSELEGGGGQACEET*GGDRQE
Trigger: CTCCTGTCTATCCCCACCCAATGTCTCCTCACAGGC...CTGGCCGCCACCTCCTTCCAGCTCACTTCCTTTAGTGCGGCCAGTACCGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR GCA 72 bp CTCGAAGAGCCAGAAAAGGGTCCCTGCAGGTCGACATaGCTAGGCAGGGGCGGTACTGGCCGCACTAAAGGA +
Preference number: 3 (lower is better)
Translates to: LEEPEKGPCRST*LGRGGTGRTKG
Trigger: TCCTTTAGTGCGGCCAGTACCGCCCCTGCCTAGGCATGTCGACCTGCAGGGACCCTTTTCTGGCTCTTCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR GCA 72 bp GCTCGGGCCTCCGGGTCTCCAGTTGGGCCCTCATGTTaGTCCTTCCTGAGTCTGACAAGTAAGCCTCACAGC +
Preference number: 3 (lower is better)
Translates to: ARASGSPVGPSC*SFLSLTSKPHS
Trigger: GCTGTGAGGCTTACTTGTCAGACTCAGGAAGGAGCAACATGAGGGCCCAACTGGAGACCCGGAGGCCCGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR-3UTR CAA 90 bp CAGATACGGTGGGAGAGCCCGACCTGTTTCCCCAATATGCCTGTGAGGAGACATTCTGCTGCAGTGGGTTaGAGCCCACGGGTGGCAGGT +
Preference number: 3 (lower is better)
Translates to: QIRWESPTCFPNMPVRRHSAAVG*SPRVAG
Trigger: ACCTGCCACCCGTGGGCTCAAACCCACTGCAGCAGA...ATGTCTCCTCACAGGCATATTGGGGAAACAGGTCGGGCTCTCCCACCGTATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR-3UTR CAA 90 bp ATGAAACGAGAGAGAACAGGGGGAAGGGACTATGGAGAACAAAGAGGGGATGGTCACAGGCGGCCTGCCTaGTTCCTGCAGGCCAGGGTG +
Preference number: 3 (lower is better)
Translates to: MKRERTGGRDYGEQRGDGHRRPA*FLQARV
Trigger: CACCCTGGCCTGCAGGAACAAGGCAGGCCGCCTGTG...ACCATCCCCTCTTTGTTCTCCATAGTCCCTTCCCCCTGTTCTCTCTCGTTTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR TCA 72 bp AATGATTTCCATCCCGTCTGTCTGCTGCAGTGGGTTTaGGCCCACGGGTGGCAGGTAAGGCCCAGGTCACCT +
Preference number: 3 (lower is better)
Translates to: NDFHPVCLLQWV*AHGWQVRPRSP
Trigger: AGGTGACCTGGGCCTTACCTGCCACCCGTGGGCTCAAACCCACTGCAGCAGACAGACGGGATGGAAATCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR GCA 72 bp AGCTCCCTCCGCCTGCCTCTTCGTGTCACTCGGCCGTaGAGAGCAACATGGAGTCCTAATGATTTCCATCCC +
Preference number: 3 (lower is better)
Translates to: SSLRLPLRVTRP*RATWSPNDFHP
Trigger: GGGATGGAAATCATTAGGACTCCATGTTGCTCTGCACGGCCGAGTGACACGAAGAGGCAGGCGGAGGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR CCA 72 bp CGCAGCATGGAAGTCTTCAGGAAACTTCTCTCCCCCTaGAATGTCGGCTCCCGGAGAACAGGACCAAGGCTG +
Preference number: 3 (lower is better)
Translates to: RSMEVFRKLLSP*NVGSRRTGPRL
Trigger: CAGCCTTGGTCCTGTTCTCCGGGAGCCGACATTCCAGGGGGAGAGAAGTTTCCTGAAGACTTCCATGCTGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR TCA 72 bp CAGGAGAGAGTGGGGACAGCTCAATTTTCCAAGCTCTaGGGTGAAAGGAGCCGGGATCAGAGCACAGCTGGG +
Preference number: 3 (lower is better)
Translates to: QERVGTAQFSKL*GERSRDQSTAG
Trigger: CCCAGCTGTGCTCTGATCCCGGCTCCTTTCACCTCAGAGCTTGGAAAATTGAGCTGTCCCCACTCTCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR GCA 72 bp GCCCTACTAGGGAACAGGGTCTCTTGTGGCAGGGAGTaGCTGCCTTGCACTGTTAAGAAGGATGCAGGCAGT +
Preference number: 3 (lower is better)
Translates to: ALLGNRVSCGRE*LPCTVKKDAGS
Trigger: ACTGCCTGCATCCTTCTTAACAGTGCAAGGCAGGCACTCCCTGCCACAAGAGACCCTGTTCCCTAGTAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR-3UTR CAA 90 bp ACTATGGAGAACAAAGAGGGGATGGTGGGCAGAGGCCTCGAAGAGCCAGAAAAGGCCTGTGAGGAGACATaGGGTGGGGATAGACAGGAG +
Preference number: 3 (lower is better)
Translates to: TMENKEGMVGRGLEEPEKACEET*GGDRQE
Trigger: CTCCTGTCTATCCCCACCCAATGTCTCCTCACAGGC...CTTTTCTGGCTCTTCGAGGCCTCTGCCCACCATCCCCTCTTTGTTCTCCATAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR GCA 72 bp AGGGGTAGGAAGAAGACAGATGGATGCCAGTACACTTaGAGATACGGTGGGAGAGCCCGACCTGTTTCCCCA +
Preference number: 3 (lower is better)
Translates to: RGRKKTDGCQYT*RYGGRARPVSP
Trigger: TGGGGAAACAGGTCGGGCTCTCCCACCGTATCTGCAAGTGTACTGGCATCCATCTGTCTTCTTCCTACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR CCA 72 bp CTGCCTCTTCGTGTCACTCGGCCGTGCAGAGCAACATaGAGTCCTAATGATTTCCATCCCGTCTGTCTGCTG +
Preference number: 3 (lower is better)
Translates to: LPLRVTRPCRAT*SPNDFHPVCLL
Trigger: CAGCAGACAGACGGGATGGAAATCATTAGGACTCCATGTTGCTCTGCACGGCCGAGTGACACGAAGAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR CCA 72 bp GAAGACAGATGGATGCCAGTACACTTGCAGATACGGTaGGAGAGCCCGACCTGTTTCCCCAATATGCCTGTG +
Preference number: 3 (lower is better)
Translates to: EDRWMPVHLQIR*ESPTCFPNMPV
Trigger: CACAGGCATATTGGGGAAACAGGTCGGGCTCTCCCACCGTATCTGCAAGTGTACTGGCATCCATCTGTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR GCA 72 bp GCCTGCCTTGCACTGTTAAGAAGGATGCAGGCAGTCTaGTTAAATGGATTTCTCTGGCTGTGGGCAGCTGTG +
Preference number: 3 (lower is better)
Translates to: ACLALLRRMQAV*LNGFLWLWAAV
Trigger: CACAGCTGCCCACAGCCAGAGAAATCCATTTAAGCAGACTGCCTGCATCCTTCTTAACAGTGCAAGGCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR-3UTR CAA 90 bp TTCTACTGTAGGGGTAGGAAGAAGACAGATGGATGCCAGTACACTTGCAGATACCACAGGGTGCTTGTGTaGGCCGCAATGAACGTGGGC +
Preference number: 3 (lower is better)
Translates to: FYCRGRKKTDGCQYTCRYHRVLV*AAMNVG
Trigger: GCCCACGTTCATTGCGGCCAACACAAGCACCCTGTG...GTATCTGCAAGTGTACTGGCATCCATCTGTCTTCTTCCTACCCCTACAGTAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR-3UTR CAA 90 bp GGAGGTTCTGGGGAGGAGAAAAGCTGCCCTACTAGGGAACAGGGTCTCTTGTGGAGAAGTATCTGCAAATaGTTGGAGTTTCAGCAGGGA +
Preference number: 3 (lower is better)
Translates to: GGSGEEKSCPTREQGLLWRSICK*LEFQQG
Trigger: TCCCTGCTGAAACTCCAACAATTTGCAGATACTTCT...CCACAAGAGACCCTGTTCCCTAGTAGGGCAGCTTTTCTCCTCCCCAGAACCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR GCA 72 bp TGTTTCTACTGTAGGGGTAGGAAGAAGACAGATGGATaGCAGTACACTTGCAGATACGGTGGGAGAGCCCGA +
Preference number: 3 (lower is better)
Translates to: CFYCRGRKKTDG*QYTCRYGGRAR
Trigger: TCGGGCTCTCCCACCGTATCTGCAAGTGTACTGGCATCCATCTGTCTTCTTCCTACCCCTACAGTAGAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR CCA 72 bp AAAGCTGCTGGTAGGATGAATGGGCGCAGGAGAGAGTaGGGACAGCTCAATTTTCCAAGCTCTGAGGTGAAA +
Preference number: 3 (lower is better)
Translates to: KAAGRMNGRRRE*GQLNFPSSEVK
Trigger: TTTCACCTCAGAGCTTGGAAAATTGAGCTGTCCCCACTCTCTCCTGCGCCCATTCATCCTACCAGCAGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR CCA 72 bp CCCTGGGAAGAACTCAGAGAAGGCAGCAGTAGAGGCTaGGAAGGAGATTGTTATGAGGTAGGAGGAATAGCA +
Preference number: 3 (lower is better)
Translates to: PWEELREGSSRG*EGDCYEVGGIA
Trigger: TGCTATTCCTCCTACCTCATAACAATCTCCTTCCCAGCCTCTACTGCTGCCTTCTCTGAGTTCTTCCCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000510898.7
3UTR-3UTR CAA 90 bp GGTTCTGGGGAGGAGAAAAGCTGCCCTACTAGGGAACAGGGTCTCTTGTGGCAGAGGAGAGAGCAAAAATaGTGTGTCCGTCATGAAAAT +
Preference number: 3 (lower is better)
Translates to: GSGEEKSCPTREQGLLWQRREQK*CVRHEN
Trigger: ATTTTCATGACGGACACACAATTTTTGCTCTCTCCT...CTGCCACAAGAGACCCTGTTCCCTAGTAGGGCAGCTTTTCTCCTCCCCAGAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR-3UTR CAA 90 bp AGGTGGCCGAAGAGGAATGTGAGGTCAAGGGAAGGTTTAAAATGTGAAATTACAGCCTGTGAGGAGACATaGGGTGGGGATAGACAGGAG +
Preference number: 3 (lower is better)
Translates to: RWPKRNVRSREGLKCEITACEET*GGDRQE
Trigger: CTCCTGTCTATCCCCACCCAATGTCTCCTCACAGGC...TGTAATTTCACATTTTAAACCTTCCCTTGACCTCACATTCCTCTTCGGCCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR GCA 72 bp ATGAGGAGACTGACGCCTGGGGTTCCCAGAAGTATCTaGAAATTGTTGGAGTTTCAGCAGGGAACAAGTGTT +
Preference number: 3 (lower is better)
Translates to: MRRLTPGVPRSI*KLLEFQQGTSV
Trigger: AACACTTGTTCCCTGCTGAAACTCCAACAATTTGCAGATACTTCTGGGAACCCCAGGCGTCAGTCTCCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR CCA 72 bp GCAAATTGTTGGAGTTTCAGCAGGGAACAAGTGTTTTaGACGAGGGTGTCTCTGAAATCCCTTCCACCTGCA +
Preference number: 3 (lower is better)
Translates to: ANCWSFSREQVF*TRVSLKSLPPA
Trigger: TGCAGGTGGAAGGGATTTCAGAGACACCCTCGTCCAAAACACTTGTTCCCTGCTGAAACTCCAACAATTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR-3UTR CAA 90 bp GGTAGGATGAATGGGCGCAGGAGAGAGTGGGGACAGCTCAATTTTCCAAGCTCTCTTGTTGCTTTTGTTTaGGAGAATAAGGTTGGTGAC +
Preference number: 3 (lower is better)
Translates to: GRMNGRRREWGQLNFPSSLVAFV*ENKVGD
Trigger: GTCACCAACCTTATTCTCCAAAACAAAAGCAACAAG...AGAGCTTGGAAAATTGAGCTGTCCCCACTCTCTCCTGCGCCCATTCATCCTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR-3UTR CAA 90 bp ACTATGGAGAACAAAGAGGGGATGGTGGGCAGAGGCCTCGAAGAGCCAGAAAAGGAGAAGTCAAAGTCCTaGTTGCTTTTGTTTTGGAGA +
Preference number: 3 (lower is better)
Translates to: TMENKEGMVGRGLEEPEKEKSKS*LLLFWR
Trigger: TCTCCAAAACAAAAGCAACAAGGACTTTGACTTCTC...CTTTTCTGGCTCTTCGAGGCCTCTGCCCACCATCCCCTCTTTGTTCTCCATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR TCA 72 bp GTAGGCACGCAGCAAACTCTCATCAAGGATTATGCCTaGTACGTCATCGGTTCTCTCTCCTTTACAGATGAG +
Preference number: 3 (lower is better)
Translates to: VGTQQTLIKDYA*YVIGSLSFTDE
Trigger: CTCATCTGTAAAGGAGAGAGAACCGATGACGTATCAGGCATAATCCTTGATGAGAGTTTGCTGCGTGCCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR-3UTR CAA 90 bp CAGAGCCGAGTGCTGCTGAGAAGTCAAAGTCCTTGTTGCTTTTGTTTTGGAGAAAATTACAGAGCATGTTaGCGTGTGGCTGGAAAAGCT +
Preference number: 3 (lower is better)
Translates to: QSRVLLRSQSPCCFCFGENYRAC*RVAGKA
Trigger: AGCTTTTCCAGCCACACGCAAACATGCTCTGTAATT...TTCTCCAAAACAAAAGCAACAAGGACTTTGACTTCTCAGCAGCACTCGGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR-3UTR CAA 90 bp AACCAGAGCCGAGTGCTGCTGAGAAGTCAAAGTCCTTGTTGCTTTTGTTTTGGAAATTACAGAGCATGTTaGCGTGTGGCTGGAAAAGCT +
Preference number: 3 (lower is better)
Translates to: NQSRVLLRSQSPCCFCFGNYRAC*RVAGKA
Trigger: AGCTTTTCCAGCCACACGCAAACATGCTCTGTAATT...TCCAAAACAAAAGCAACAAGGACTTTGACTTCTCAGCAGCACTCGGCTCTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR-3UTR CAA 90 bp TTCTACTGTAGGGGTAGGAAGAAGACAGATGGATGCCAGTACACTTGCAGATACAGGAGAGAGCAAAAATaGTGTGTCCGTCATGAAAAT +
Preference number: 3 (lower is better)
Translates to: FYCRGRKKTDGCQYTCRYRREQK*CVRHEN
Trigger: ATTTTCATGACGGACACACAATTTTTGCTCTCTCCT...GTATCTGCAAGTGTACTGGCATCCATCTGTCTTCTTCCTACCCCTACAGTAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR TCA 72 bp GAAGAGGAATGTGAGGTCAAGGGAAGGTTTAAAATGTaGAATTACAGAGCATGTTTGCGTGTGGCTGGAAAA +
Preference number: 3 (lower is better)
Translates to: EEECEVKGRFKM*NYRACLRVAGK
Trigger: TTTTCCAGCCACACGCAAACATGCTCTGTAATTTCACATTTTAAACCTTCCCTTGACCTCACATTCCTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR TCA 90 bp GGCTGTGGGCAGCTGTGTGCAGGCACTGAGGAGGTCTGGGCTCGCCCAAGGCCGCAGGGGCGTGTGCCGTaGGTGCCCCTGCCGGGAGCT +
Preference number: 4 (lower is better)
Translates to: GCGQLCAGTEEVWARPRPQGRVP*VPLPGA
Trigger: AGCTCCCGGCAGGGGCACTCACGGCACACGCCCCTG...CGGCCTTGGGCGAGCCCAGACCTCCTCAGTGCCTGCACACAGCTGCCCACAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR GCA 90 bp AGGGCTGAGGTCCTCCACAGGCGGCCTGCCTTGTTCCTGCAGGCCAGGGTGGACTTGTGGGGCTGCGGCTaGCGGGGCCCTCGTGCGGCT +
Preference number: 4 (lower is better)
Translates to: RAEVLHRRPALFLQARVDLWGCG*RGPRAA
Trigger: AGCCGCACGAGGGCCCCGGCAGCCGCAGCCCCACAA...GTCCACCCTGGCCTGCAGGAACAAGGCAGGCCGCCTGTGGAGGACCTCAGCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp AGGGCTGAGGTCCTCCACAGGCGGCCTGCCTTGTTCCTGCAGGCCAGGGTGGACGGGAGGGCAGAGAGGTaGCCCGTGGCAGGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RAEVLHRRPALFLQARVDGRAER*PVAGGR
Trigger: CCTGCCCCCTGCCACGGGCCACCTCTCTGCCCTCCC...GTCCACCCTGGCCTGCAGGAACAAGGCAGGCCGCCTGTGGAGGACCTCAGCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR TCA 90 bp GCCGCAATGAACGTGGGCAGGGGCGTGTGCCGTGAGTGCCCCTGCCGGGAGCTGAGAGCCCTGGAGGCATaGCGCTTGCGTGCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: AAMNVGRGVCRECPCRELRALEA*RLRAWL
Trigger: CAGCCACGCACGCAAGCGTCATGCCTCCAGGGCTCT...CAGCTCCCGGCAGGGGCACTCACGGCACACGCCCCTGCCCACGTTCATTGCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR TCA 90 bp AGGGCTGAGGTCCTCCACAGGCGGCCTGCCTTGTTCCTGCAGGCCAGGGTGGACCTGGGCACGCGCGTCTaGTCGCAGTCTGGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: RAEVLHRRPALFLQARVDLGTRV*SQSGSP
Trigger: CGGGGAGCCAGACTGCGATCAGACGCGCGTGCCCAG...GTCCACCCTGGCCTGCAGGAACAAGGCAGGCCGCCTGTGGAGGACCTCAGCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357198.9
CDS-3UTR TCA 90 bp AGGGCTGAGGTCCTCCACAGGCGGCCTGCCTTGTTCCTGCAGGCCAGGGTGGACCCTGTGCCCTCCACCTaGTCCAGCTCCAGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: RAEVLHRRPALFLQARVDPVPST*SSSSSR
Trigger: GCGGCTGCTGGAGCTGGATCAGGTGGAGGGCACAGG...GTCCACCCTGGCCTGCAGGAACAAGGCAGGCCGCCTGTGGAGGACCTCAGCCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR GCA 90 bp AGGGCTGAGGTCCTCCACAGGCGGCCTGCCTTGTTCCTGCAGGCCAGGGTGGACCGACCTGTCACCCGCTaGTCCCAGGCCACCATCCCG +
Preference number: 4 (lower is better)
Translates to: RAEVLHRRPALFLQARVDRPVTR*SQATIP
Trigger: CGGGATGGTGGCCTGGGAGCAGCGGGTGACAGGTCG...GTCCACCCTGGCCTGCAGGAACAAGGCAGGCCGCCTGTGGAGGACCTCAGCCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR GCA 90 bp AGGGCTGAGGTCCTCCACAGGCGGCCTGCCTTGTTCCTGCAGGCCAGGGTGGACTCAGGTTCCCCACCGTaGAGCGTGGGGCTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: RAEVLHRRPALFLQARVDSGSPP*SVGLAS
Trigger: GGAGGCCAGCCCCACGCTGCACGGTGGGGAACCTGA...GTCCACCCTGGCCTGCAGGAACAAGGCAGGCCGCCTGTGGAGGACCTCAGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR GCA 90 bp GGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCCCTGCCGGGGCCCTCGTaGGGCTCAGGTTCCCCACCG +
Preference number: 4 (lower is better)
Translates to: GGHRRVSAWAQCLPTSPPLPGPS*GSGSPP
Trigger: CGGTGGGGAACCTGAGCCGCACGAGGGCCCCGGCAG...GGGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR GCA 90 bp GGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCTTGTGGGGCTGCGGCTaGCGGGGCCCTCGTGCGGCT +
Preference number: 4 (lower is better)
Translates to: GWTQACVCMGPMFAHQPTLWGCG*RGPRAA
Trigger: AGCCGCACGAGGGCCCCGGCAGCCGCAGCCCCACAA...GGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp GGCTGTGGGCAGCTGTGTGCAGGCACTGAGGAGGTCTGGGCTCGCCCAAGGCCGTCAGCTGGCAGCGGGTaGCGGCCTCAGTCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: GCGQLCAGTEEVWARPRPSAGSG*RPQSSA
Trigger: TGCAGAGGACTGAGGCCGCCACCCGCTGCCAGCTGA...CGGCCTTGGGCGAGCCCAGACCTCCTCAGTGCCTGCACACAGCTGCCCACAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp GGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCGCCGGCCCCTTCAGCTaGCAGCGGGTGGCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: GWTQACVCMGPMFAHQPTAGPFS*QRVAAS
Trigger: TGAGGCCGCCACCCGCTGCCAGCTGAAGGGGCCGGC...GGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp GCCAGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCGCCGGCCCCTTCAGCTaGCAGCGGGTGGCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: ARVDTGVCLHGPNVCPPAAGPFS*QRVAAS
Trigger: TGAGGCCGCCACCCGCTGCCAGCTGAAGGGGCCGGC...GGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp GGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCGGGCCTGGTCAGCTCTaGCAGCCGCTCCCGCTGGCG +
Preference number: 4 (lower is better)
Translates to: GWTQACVCMGPMFAHQPTGPGQL*QPLPLA
Trigger: CGCCAGCGGGAGCGGCTGCCAGAGCTGACCAGGCCC...GGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp GGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCCGGGAGGGCAGAGAGGTaGCCCGTGGCAGGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GGHRRVSAWAQCLPTSPPGRAER*PVAGGR
Trigger: CCTGCCCCCTGCCACGGGCCACCTCTCTGCCCTCCC...GGGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR TCA 90 bp GCAGGCACTGAGGAGGTCTGGGCTCGCCCAAGGCCGGGGACTTTGCCAGACCAGCCTGGAGGCCTCCCTTaGCCACTCCACGCTGTCCGA +
Preference number: 4 (lower is better)
Translates to: AGTEEVWARPRPGTLPDQPGGLP*PLHAVR
Trigger: TCGGACAGCGTGGAGTGGTCAAGGGAGGCCTCCAGG...CTGGTCTGGCAAAGTCCCCGGCCTTGGGCGAGCCCAGACCTCCTCAGTGCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000377112.8
CDS-3UTR TCA 90 bp AGGGCTGAGGTCCTCCACAGGCGGCCTGCCTTGTTCCTGCAGGCCAGGGTGGACCCTGGAGGCCTCCCTTaGCCACTCCACGCTGTCCGA +
Preference number: 4 (lower is better)
Translates to: RAEVLHRRPALFLQARVDPGGLP*PLHAVR
Trigger: TCGGACAGCGTGGAGTGGTCAAGGGAGGCCTCCAGG...GTCCACCCTGGCCTGCAGGAACAAGGCAGGCCGCCTGTGGAGGACCTCAGCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501403.6
CDS-3UTR TCA 90 bp GGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCAGTCAGCCAGGCGGATaGCCCGTCGCTCCCCTCGCC +
Preference number: 4 (lower is better)
Translates to: GWTQACVCMGPMFAHQPTSQPGG*PVAPLA
Trigger: GGCGAGGGGAGCGACGGGTCATCCGCCTGGCTGACT...GGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR TCA 90 bp GGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCCAGTCAGCCAGGCGGATaGCCCGTCGCTCCCCTCGCC +
Preference number: 4 (lower is better)
Translates to: GGHRRVSAWAQCLPTSPPSQPGG*PVAPLA
Trigger: GGCGAGGGGAGCGACGGGTCATCCGCCTGGCTGACT...GGGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR TCA 90 bp AGGGCTGAGGTCCTCCACAGGCGGCCTGCCTTGTTCCTGCAGGCCAGGGTGGACGGCATCTGTGGATCCTaGGGAGGCCTCCCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: RAEVLHRRPALFLQARVDGICGS*GGLPCP
Trigger: GGGACAGGGGAGGCCTCCTCAGGATCCACAGATGCC...GTCCACCCTGGCCTGCAGGAACAAGGCAGGCCGCCTGTGGAGGACCTCAGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR GCA 90 bp AGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCTGCCGGGGCCCTCGTaGGGCTCAGGTTCCCCACCG +
Preference number: 4 (lower is better)
Translates to: RVDTGVCLHGPNVCPPAHLPGPS*GSGSPP
Trigger: CGGTGGGGAACCTGAGCCGCACGAGGGCCCCGGCAG...GTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR GCA 90 bp AGGGCTGAGGTCCTCCACAGGCGGCCTGCCTTGTTCCTGCAGGCCAGGGTGGACCTCTGGCCACCACTCTaGTGGGCGTTCAGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: RAEVLHRRPALFLQARVDLWPPL*WAFRAG
Trigger: ACCGGCCCTGAACGCCCAGCAGAGTGGTGGCCAGAG...GTCCACCCTGGCCTGCAGGAACAAGGCAGGCCGCCTGTGGAGGACCTCAGCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp AGGGCTGAGGTCCTCCACAGGCGGCCTGCCTTGTTCCTGCAGGCCAGGGTGGACCCTCCCTCAGCTGGATaGCGTCTGGGCCCAGCACCA +
Preference number: 4 (lower is better)
Translates to: RAEVLHRRPALFLQARVDPPSAG*RLGPAP
Trigger: TGGTGCTGGGCCCAGACGCCATCCAGCTGAGGGAGG...GTCCACCCTGGCCTGCAGGAACAAGGCAGGCCGCCTGTGGAGGACCTCAGCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp GCAGGCACTGAGGAGGTCTGGGCTCGCCCAAGGCCGGGGACTTTGCCAGACCAGGGCTGGCTCCTAGGATaGCGCCAGGAGCAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: AGTEEVWARPRPGTLPDQGWLLG*RQEQEQ
Trigger: CTGCTCCTGCTCCTGGCGCCATCCTAGGAGCCAGCC...CTGGTCTGGCAAAGTCCCCGGCCTTGGGCGAGCCCAGACCTCCTCAGTGCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp GCTGTGGGCAGCTGTGTGCAGGCACTGAGGAGGTCTGGGCTCGCCCAAGGCCGGGGGCAGTCAGAGCCCTaGAGGCATGACGCTTGCGTG +
Preference number: 4 (lower is better)
Translates to: AVGSCVQALRRSGLAQGRGQSEP*RHDACV
Trigger: CACGCAAGCGTCATGCCTCCAGGGCTCTGACTGCCC...CCGGCCTTGGGCGAGCCCAGACCTCCTCAGTGCCTGCACACAGCTGCCCACAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp AGGGGCGGTACTGGCCGCACTAAAGGAAGTGAGCTGGAAGGAGGTGGCGGCCAGGGCACTGAGGAGGTCTaGGCTCGCCCAAGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: RGGTGRTKGSELEGGGGQGTEEV*ARPRPG
Trigger: CCCCGGCCTTGGGCGAGCCCAGACCTCCTCAGTGCC...CTGGCCGCCACCTCCTTCCAGCTCACTTCCTTTAGTGCGGCCAGTACCGCCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp GGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCCAGTAGCGGCAGGCTCTaGGGTCCGGGCTCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GGHRRVSAWAQCLPTSPPSSGRL*GPGSAR
Trigger: CCTGGCCGAGCCCGGACCCCAGAGCCTGCCGCTACT...GGGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp AGGGCTGAGGTCCTCCACAGGCGGCCTGCCTTGTTCCTGCAGGCCAGGGTGGACTGGCCACCACTCTGCTaGGCGTTCAGGGCCGGTCAC +
Preference number: 4 (lower is better)
Translates to: RAEVLHRRPALFLQARVDWPPLC*AFRAGH
Trigger: GTGACCGGCCCTGAACGCCCAGCAGAGTGGTGGCCA...GTCCACCCTGGCCTGCAGGAACAAGGCAGGCCGCCTGTGGAGGACCTCAGCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR TCA 90 bp GGCTGTGGGCAGCTGTGTGCAGGCACTGAGGAGGTCTGGGCTCGCCCAAGGCCGAAGGGTGTGTGCAGCTaGGGTGGAGTTGCGGTGAGG +
Preference number: 4 (lower is better)
Translates to: GCGQLCAGTEEVWARPRPKGVCS*GGVAVR
Trigger: CCTCACCGCAACTCCACCTCAGCTGCACACACCCTT...CGGCCTTGGGCGAGCCCAGACCTCCTCAGTGCCTGCACACAGCTGCCCACAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR TCA 90 bp GGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCCCCTGTGCCCTCCACCTaGTCCAGCTCCAGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: GGHRRVSAWAQCLPTSPPPVPST*SSSSSR
Trigger: GCGGCTGCTGGAGCTGGATCAGGTGGAGGGCACAGG...GGGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR GCA 90 bp GGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCCGACCTGTCACCCGCTaGTCCCAGGCCACCATCCCG +
Preference number: 4 (lower is better)
Translates to: GWTQACVCMGPMFAHQPTRPVTR*SQATIP
Trigger: CGGGATGGTGGCCTGGGAGCAGCGGGTGACAGGTCG...GGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR GCA 90 bp AGGGCTGAGGTCCTCCACAGGCGGCCTGCCTTGTTCCTGCAGGCCAGGGTGGACTGTAGAGGGCCTGGGTaGCCTTGGCCTCCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: RAEVLHRRPALFLQARVDCRGPG*PWPPSA
Trigger: AGCTGAGGGAGGCCAAGGGCACCCAGGCCCTCTACA...GTCCACCCTGGCCTGCAGGAACAAGGCAGGCCGCCTGTGGAGGACCTCAGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR GCA 90 bp GCTGTGGGCAGCTGTGTGCAGGCACTGAGGAGGTCTGGGCTCGCCCAAGGCCGGTGTCGGAGCCGAACTTaGGCAGGAAGTGGTAGGGCC +
Preference number: 4 (lower is better)
Translates to: AVGSCVQALRRSGLAQGRCRSRT*AGSGRA
Trigger: GGCCCTACCACTTCCTGCGCAAGTTCGGCTCCGACA...CCGGCCTTGGGCGAGCCCAGACCTCCTCAGTGCCTGCACACAGCTGCCCACAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp GGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCCAGGCCAGCTGGCAGATaGGGCCCATCCAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: GGHRRVSAWAQCLPTSPPRPAGR*GPSRPG
Trigger: GCCAGGCCTGGATGGGCCCCATCTGCCAGCTGGCCT...GGGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp AAGCCTCACAGCTCCCTCCGCCTGCCTCTTCGTGTCACTCGGCCGTGCAGAGCAAGGCCAGCTGGCAGATaGGGCCCATCCAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: KPHSSLRLPLRVTRPCRARPAGR*GPSRPG
Trigger: GCCAGGCCTGGATGGGCCCCATCTGCCAGCTGGCCT...TGCTCTGCACGGCCGAGTGACACGAAGAGGCAGGCGGAGGGAGCTGTGAGGCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR CCA 90 bp GGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCCCCCGGGAAGGCCAGCTaGCAGATGGGGCCCATCCAG +
Preference number: 4 (lower is better)
Translates to: GGHRRVSAWAQCLPTSPPPGKAS*QMGPIQ
Trigger: CTGGATGGGCCCCATCTGCCAGCTGGCCTTCCCGGG...GGGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp GCCAGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCCCGGGAAGGCCAGCTaGCAGATGGGGCCCATCCAG +
Preference number: 4 (lower is better)
Translates to: ARVDTGVCLHGPNVCPPAPGKAS*QMGPIQ
Trigger: CTGGATGGGCCCCATCTGCCAGCTGGCCTTCCCGGG...GGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp GGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCCAGCTGGATGGCGTCTaGGCCCAGCACCAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: GWTQACVCMGPMFAHQPTQLDGV*AQHQQG
Trigger: GCCCTGCTGGTGCTGGGCCCAGACGCCATCCAGCTG...GGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp GCCAGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCAGCTGGATGGCGTCTaGGCCCAGCACCAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: ARVDTGVCLHGPNVCPPAQLDGV*AQHQQG
Trigger: GCCCTGCTGGTGCTGGGCCCAGACGCCATCCAGCTG...GGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp GCTGTGGGCAGCTGTGTGCAGGCACTGAGGAGGTCTGGGCTCGCCCAAGGCCGGTGGCTCAGGTCCTGGTaGCATCTCCCGAAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: AVGSCVQALRRSGLAQGRWLRSW*HLPKLS
Trigger: GGAGAGCTTCGGGAGATGCCACCAGGACCTGAGCCA...CCGGCCTTGGGCGAGCCCAGACCTCCTCAGTGCCTGCACACAGCTGCCCACAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR CCA 90 bp AGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACAGTAGCGGCAGGCTCTaGGGTCCGGGCTCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RVDTGVCLHGPNVCPPAHSSGRL*GPGSAR
Trigger: CCTGGCCGAGCCCGGACCCCAGAGCCTGCCGCTACT...GTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp AGGGCTGAGGTCCTCCACAGGCGGCCTGCCTTGTTCCTGCAGGCCAGGGTGGACTGCCTGGGGGCCCACTaGCACGCTTGCACACTGAAG +
Preference number: 4 (lower is better)
Translates to: RAEVLHRRPALFLQARVDCLGAH*HACTLK
Trigger: CTTCAGTGTGCAAGCGTGCCAGTGGGCCCCCAGGCA...GTCCACCCTGGCCTGCAGGAACAAGGCAGGCCGCCTGTGGAGGACCTCAGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp AGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCCCCACCGTGCAGCGTaGGGCTGGCCTCCAGCACAC +
Preference number: 4 (lower is better)
Translates to: RVDTGVCLHGPNVCPPAHPHRAA*GWPPAH
Trigger: GTGTGCTGGAGGCCAGCCCCACGCTGCACGGTGGGG...GTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp GCCAGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCAGATGGGACTGGTTGTaGGGCTGCGGCTGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: ARVDTGVCLHGPNVCPPARWDWL*GCGCRG
Trigger: GCCCCGGCAGCCGCAGCCCCACAACCAGTCCCATCT...GGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp GGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCAGATGGGACTGGTTGTaGGGCTGCGGCTGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: GWTQACVCMGPMFAHQPTRWDWL*GCGCRG
Trigger: GCCCCGGCAGCCGCAGCCCCACAACCAGTCCCATCT...GGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp GGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCCCAGGGTACTGTCGTTaGCCGGGCCGGGCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: GWTQACVCMGPMFAHQPTPGYCR*PGRASS
Trigger: TGAGCTGGCCCGGCCCGGCCAACGACAGTACCCTGG...GGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp AGGGCTGAGGTCCTCCACAGGCGGCCTGCCTTGTTCCTGCAGGCCAGGGTGGACCACCACTGTGCTGCCTaGGGCGGTTGGCCACCTCTT +
Preference number: 4 (lower is better)
Translates to: RAEVLHRRPALFLQARVDHHCAA*GGWPPL
Trigger: AAGAGGTGGCCAACCGCCCCAGGCAGCACAGTGGTG...GTCCACCCTGGCCTGCAGGAACAAGGCAGGCCGCCTGTGGAGGACCTCAGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501403.6
CDS-3UTR CCA 90 bp AGGGCTGAGGTCCTCCACAGGCGGCCTGCCTTGTTCCTGCAGGCCAGGGTGGACTGTCTCTCCCCTTCCTaGGGTGCAGCCCAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: RAEVLHRRPALFLQARVDCLSPS*GAAQAP
Trigger: AGGAGCCTGGGCTGCACCCCAGGAAGGGGAGAGACA...GTCCACCCTGGCCTGCAGGAACAAGGCAGGCCGCCTGTGGAGGACCTCAGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501403.6
CDS-3UTR TCA 90 bp GGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCCAGCCGTGCCACGCCTaGTGGGCCTCCTGCATACAG +
Preference number: 4 (lower is better)
Translates to: GWTQACVCMGPMFAHQPTQPCHA*WASCIQ
Trigger: CTGTATGCAGGAGGCCCATCAGGCGTGGCACGGCTG...GGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR TCA 90 bp GCCAGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCGGCATCTGTGGATCCTaGGGAGGCCTCCCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: ARVDTGVCLHGPNVCPPAGICGS*GGLPCP
Trigger: GGGACAGGGGAGGCCTCCTCAGGATCCACAGATGCC...GGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR TCA 90 bp GCAGGCACTGAGGAGGTCTGGGCTCGCCCAAGGCCGGGGACTTTGCCAGACCAGAAGGGTGTGTGCAGCTaGGGTGGAGTTGCGGTGAGG +
Preference number: 4 (lower is better)
Translates to: AGTEEVWARPRPGTLPDQKGVCS*GGVAVR
Trigger: CCTCACCGCAACTCCACCTCAGCTGCACACACCCTT...CTGGTCTGGCAAAGTCCCCGGCCTTGGGCGAGCCCAGACCTCCTCAGTGCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR TCA 90 bp GGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCGGGCACAGGGGGTGCTaGAGGCAAAGAGGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: GWTQACVCMGPMFAHQPTGHRGC*RQRGPH
Trigger: GTGAGGGCCTCTTTGCCTTCAGCACCCCCTGTGCCC...GGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR TCA 90 bp GCCAGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCGGGCACAGGGGGTGCTaGAGGCAAAGAGGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: ARVDTGVCLHGPNVCPPAGHRGC*RQRGPH
Trigger: GTGAGGGCCTCTTTGCCTTCAGCACCCCCTGTGCCC...GGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR TCA 90 bp GCCAGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCGCCTTGAAACCTGCCTaGGGGTCAGGGCGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: ARVDTGVCLHGPNVCPPAALKPA*GSGRPV
Trigger: CACAGGCCGCCCTGACCCTCAGGCAGGTTTCAAGGC...GGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR GCA 90 bp GCAGGCACTGAGGAGGTCTGGGCTCGCCCAAGGCCGGGGACTTTGCCAGACCAGGCCCACTGGCACGCTTaGACACTGAAGCGTAGAGCC +
Preference number: 4 (lower is better)
Translates to: AGTEEVWARPRPGTLPDQAHWHA*TLKRRA
Trigger: GGCTCTACGCTTCAGTGTGCAAGCGTGCCAGTGGGC...CTGGTCTGGCAAAGTCCCCGGCCTTGGGCGAGCCCAGACCTCCTCAGTGCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR GCA 90 bp AGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACTCAGGTTCCCCACCGTaGAGCGTGGGGCTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: RVDTGVCLHGPNVCPPAHSGSPP*SVGLAS
Trigger: GGAGGCCAGCCCCACGCTGCACGGTGGGGAACCTGA...GTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR GCA 90 bp GAACAAAGAGGGGATGGTGGGCAGAGGCCTCGAAGAGCCAGAAAAGGGTCCCTGCTGCCGGGGCCCTCGTaGGGCTCAGGTTCCCCACCG +
Preference number: 4 (lower is better)
Translates to: EQRGDGGQRPRRARKGSLLPGPS*GSGSPP
Trigger: CGGTGGGGAACCTGAGCCGCACGAGGGCCCCGGCAG...CAGGGACCCTTTTCTGGCTCTTCGAGGCCTCTGCCCACCATCCCCTCTTTGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR GCA 90 bp GAACAAAGAGGGGATGGTGGGCAGAGGCCTCGAAGAGCCAGAAAAGGGTCCCTGTTGTGGGGCTGCGGCTaGCGGGGCCCTCGTGCGGCT +
Preference number: 4 (lower is better)
Translates to: EQRGDGGQRPRRARKGSLLWGCG*RGPRAA
Trigger: AGCCGCACGAGGGCCCCGGCAGCCGCAGCCCCACAA...CAGGGACCCTTTTCTGGCTCTTCGAGGCCTCTGCCCACCATCCCCTCTTTGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR GCA 90 bp GCCAGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCGGTCAGGGCGGCCTGTaGCCTCCACCTGATCCAGCT +
Preference number: 4 (lower is better)
Translates to: ARVDTGVCLHGPNVCPPAGQGGL*PPPDPA
Trigger: AGCTGGATCAGGTGGAGGGCACAGGCCGCCCTGACC...GGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR GCA 90 bp GGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCGGTCAGGGCGGCCTGTaGCCTCCACCTGATCCAGCT +
Preference number: 4 (lower is better)
Translates to: GWTQACVCMGPMFAHQPTGQGGL*PPPDPA
Trigger: AGCTGGATCAGGTGGAGGGCACAGGCCGCCCTGACC...GGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR GCA 90 bp GGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCCCTCTGGCCACCACTCTaGTGGGCGTTCAGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: GGHRRVSAWAQCLPTSPPLWPPL*WAFRAG
Trigger: ACCGGCCCTGAACGCCCAGCAGAGTGGTGGCCAGAG...GGGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp AGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACAGGCCAGCTGGCAGATaGGGCCCATCCAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: RVDTGVCLHGPNVCPPAHRPAGR*GPSRPG
Trigger: GCCAGGCCTGGATGGGCCCCATCTGCCAGCTGGCCT...GTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp AGGGCTGAGGTCCTCCACAGGCGGCCTGCCTTGTTCCTGCAGGCCAGGGTGGACGAGACTGGGCATCTGTaGATCCTGAGGAGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: RAEVLHRRPALFLQARVDETGHL*ILRRPP
Trigger: GGGAGGCCTCCTCAGGATCCACAGATGCCCAGTCTC...GTCCACCCTGGCCTGCAGGAACAAGGCAGGCCGCCTGTGGAGGACCTCAGCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp GGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCTCAGCTGGCAGCGGGTaGCGGCCTCAGTCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: GWTQACVCMGPMFAHQPTSAGSG*RPQSSA
Trigger: TGCAGAGGACTGAGGCCGCCACCCGCTGCCAGCTGA...GGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp GGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCCCTCCCTCAGCTGGATaGCGTCTGGGCCCAGCACCA +
Preference number: 4 (lower is better)
Translates to: GWTQACVCMGPMFAHQPTPPSAG*RLGPAP
Trigger: TGGTGCTGGGCCCAGACGCCATCCAGCTGAGGGAGG...GGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp GCTGGAAAAGCTGCTGGTAGGATGAATGGGCGCAGGAGAGAGTGGGGACAGCTCGGGAGGGCAGAGAGGTaGCCCGTGGCAGGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: AGKAAGRMNGRRREWGQLGRAER*PVAGGR
Trigger: CCTGCCCCCTGCCACGGGCCACCTCTCTGCCCTCCC...GAGCTGTCCCCACTCTCTCCTGCGCCCATTCATCCTACCAGCAGCTTTTCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR CCA 90 bp AGGGCTGAGGTCCTCCACAGGCGGCCTGCCTTGTTCCTGCAGGCCAGGGTGGACTGGCTCAGGTCCTGGTaGCATCTCCCGAAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: RAEVLHRRPALFLQARVDWLRSW*HLPKLS
Trigger: GGAGAGCTTCGGGAGATGCCACCAGGACCTGAGCCA...GTCCACCCTGGCCTGCAGGAACAAGGCAGGCCGCCTGTGGAGGACCTCAGCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp GGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCCCGTGCAGCGTGGGGCTaGCCTCCAGCACACACAGGT +
Preference number: 4 (lower is better)
Translates to: GGHRRVSAWAQCLPTSPPRAAWG*PPAHTG
Trigger: ACCTGTGTGTGCTGGAGGCCAGCCCCACGCTGCACG...GGGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp GGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCCGTGCAGCGTGGGGCTaGCCTCCAGCACACACAGGT +
Preference number: 4 (lower is better)
Translates to: GWTQACVCMGPMFAHQPTRAAWG*PPAHTG
Trigger: ACCTGTGTGTGCTGGAGGCCAGCCCCACGCTGCACG...GGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp AGGGCTGAGGTCCTCCACAGGCGGCCTGCCTTGTTCCTGCAGGCCAGGGTGGACTGTGGTAGATGGGACTaGTTGTGGGGCTGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: RAEVLHRRPALFLQARVDCGRWD*LWGCGC
Trigger: GCAGCCGCAGCCCCACAACCAGTCCCATCTACCACA...GTCCACCCTGGCCTGCAGGAACAAGGCAGGCCGCCTGTGGAGGACCTCAGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp AGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCCAGGGTACTGTCGTTaGCCGGGCCGGGCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: RVDTGVCLHGPNVCPPAHPGYCR*PGRASS
Trigger: TGAGCTGGCCCGGCCCGGCCAACGACAGTACCCTGG...GTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp GGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCAGCAGCCGCCGGTACTaGGCCTCCAGGGTACTGTCG +
Preference number: 4 (lower is better)
Translates to: GWTQACVCMGPMFAHQPTSSRRY*ASRVLS
Trigger: CGACAGTACCCTGGAGGCCCAGTACCGGCGGCTGCT...GGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp AGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCCGGTCACAAGGGGCTaGGCCCTTCCTCCGCTCACG +
Preference number: 4 (lower is better)
Translates to: RVDTGVCLHGPNVCPPAHPVTRG*ALPPLT
Trigger: CGTGAGCGGAGGAAGGGCCCAGCCCCTTGTGACCGG...GTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp GGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCTGGCCACCACTCTGCTaGGCGTTCAGGGCCGGTCAC +
Preference number: 4 (lower is better)
Translates to: GWTQACVCMGPMFAHQPTWPPLC*AFRAGH
Trigger: GTGACCGGCCCTGAACGCCCAGCAGAGTGGTGGCCA...GGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR TCA 90 bp GGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCCTTCGCTCGGTGGTGGTaGGCAGGAAGGCACCGGTGT +
Preference number: 4 (lower is better)
Translates to: GGHRRVSAWAQCLPTSPPFARWW*AGRHRC
Trigger: ACACCGGTGCCTTCCTGCTCACCACCACCGAGCGAA...GGGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR TCA 90 bp GCCAGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCAGGCCTGGCGGTGCTaGGCAGCCAGTAGATGGCTT +
Preference number: 4 (lower is better)
Translates to: ARVDTGVCLHGPNVCPPAQAWRC*AASRWL
Trigger: AAGCCATCTACTGGCTGCTCAGCACCGCCAGGCCTG...GGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR TCA 90 bp AGGGGCGGTACTGGCCGCACTAAAGGAAGTGAGCTGGAAGGAGGTGGCGGCCAGCAGGCCTGGCGGTGCTaGGCAGCCAGTAGATGGCTT +
Preference number: 4 (lower is better)
Translates to: RGGTGRTKGSELEGGGGQQAWRC*AASRWL
Trigger: AAGCCATCTACTGGCTGCTCAGCACCGCCAGGCCTG...CTGGCCGCCACCTCCTTCCAGCTCACTTCCTTTAGTGCGGCCAGTACCGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000510898.7
CDS-3UTR TCA 90 bp AGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACGGCACGCTTGCACACTaGAGCGTAGAGCCCGGACGC +
Preference number: 4 (lower is better)
Translates to: RVDTGVCLHGPNVCPPAHGTLAH*SVEPGR
Trigger: GCGTCCGGGCTCTACGCTTCAGTGTGCAAGCGTGCC...GTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR TCA 90 bp AGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACGCCTTGAAACCTGCCTaGGGGTCAGGGCGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: RVDTGVCLHGPNVCPPAHALKPA*GSGRPV
Trigger: CACAGGCCGCCCTGACCCTCAGGCAGGTTTCAAGGC...GTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR TCA 90 bp AGGGGCGGTACTGGCCGCACTAAAGGAAGTGAGCTGGAAGGAGGTGGCGGCCAGCTGCTGCAGTGGGTTTaGGCCCACGGGTGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: RGGTGRTKGSELEGGGGQLLQWV*AHGWQV
Trigger: TACCTGCCACCCGTGGGCTCAAACCCACTGCAGCAG...CTGGCCGCCACCTCCTTCCAGCTCACTTCCTTTAGTGCGGCCAGTACCGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR GCA 90 bp GGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCGCGGCCTCAGTCCTCTaGACCACCACGGGAAACTCG +
Preference number: 4 (lower is better)
Translates to: GWTQACVCMGPMFAHQPTAASVL*TTTGNS
Trigger: CGAGTTTCCCGTGGTGGTGCAGAGGACTGAGGCCGC...GGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR GCA 90 bp GCCAGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCGCGGCCTCAGTCCTCTaGACCACCACGGGAAACTCG +
Preference number: 4 (lower is better)
Translates to: ARVDTGVCLHGPNVCPPAAASVL*TTTGNS
Trigger: CGAGTTTCCCGTGGTGGTGCAGAGGACTGAGGCCGC...GGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR GCA 90 bp GGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCCTGTAGAGGGCCTGGGTaGCCTTGGCCTCCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: GGHRRVSAWAQCLPTSPPCRGPG*PWPPSA
Trigger: AGCTGAGGGAGGCCAAGGGCACCCAGGCCCTCTACA...GGGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR GCA 90 bp GGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCCCCGGGCTCGGCCAGGTaGATTTTCCTGGACGTGGGT +
Preference number: 4 (lower is better)
Translates to: GGHRRVSAWAQCLPTSPPPGSAR*IFLDVG
Trigger: ACCCACGTCCAGGAAAATGCACCTGGCCGAGCCCGG...GGGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR GCA 90 bp GCCAGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCCGGGCTCGGCCAGGTaGATTTTCCTGGACGTGGGT +
Preference number: 4 (lower is better)
Translates to: ARVDTGVCLHGPNVCPPAPGSAR*IFLDVG
Trigger: ACCCACGTCCAGGAAAATGCACCTGGCCGAGCCCGG...GGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR GCA 90 bp GCCAGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCTTGGCCTTGAAACCTaGCTGAGGGTCAGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: ARVDTGVCLHGPNVCPPALGLET*LRVRAA
Trigger: GGCCGCCCTGACCCTCAGGCAGGTTTCAAGGCCAAG...GGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR GCA 90 bp GGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCCGGCCTGCCTTGTTCCTaGAGGCCAGGGTGGACACAG +
Preference number: 4 (lower is better)
Translates to: GGHRRVSAWAQCLPTSPPGLPCS*RPGWTQ
Trigger: CTGTGTCCACCCTGGCCTGCAGGAACAAGGCAGGCC...GGGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR GCA 90 bp GGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCGGCCTGCCTTGTTCCTaGAGGCCAGGGTGGACACAG +
Preference number: 4 (lower is better)
Translates to: GWTQACVCMGPMFAHQPTGLPCS*RPGWTQ
Trigger: CTGTGTCCACCCTGGCCTGCAGGAACAAGGCAGGCC...GGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR GCA 90 bp GGAGAGCCCGACCTGTTTCCCCAATATGCCTGTGAGGAGACATTGGGTGGGGATGTGGGCAGGGGCGTGTaGCGTGAGTGCCCCTGCCGG +
Preference number: 4 (lower is better)
Translates to: GEPDLFPQYACEETLGGDVGRGV*RECPCR
Trigger: CCGGCAGGGGCACTCACGGCACACGCCCCTGCCCAC...ATCCCCACCCAATGTCTCCTCACAGGCATATTGGGGAAACAGGTCGGGCTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR CCA 90 bp GGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCTCTCCAGAGGGTCCATaGTCACGGCCAGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: GWTQACVCMGPMFAHQPTSPEGP*SRPGAG
Trigger: CCCTGCTCCTGGCCGTGACCATGGACCCTCTGGAGA...GGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp GCAGGCACTGAGGAGGTCTGGGCTCGCCCAAGGCCGGGGACTTTGCCAGACCAGCCCCTCTTGGGAGACTaGGCATCTGTGGATCCTGAG +
Preference number: 4 (lower is better)
Translates to: AGTEEVWARPRPGTLPDQPLLGD*ASVDPE
Trigger: CTCAGGATCCACAGATGCCCAGTCTCCCAAGAGGGG...CTGGTCTGGCAAAGTCCCCGGCCTTGGGCGAGCCCAGACCTCCTCAGTGCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp AGGGCTGAGGTCCTCCACAGGCGGCCTGCCTTGTTCCTGCAGGCCAGGGTGGACCCCCTCTTGGGAGACTaGGCATCTGTGGATCCTGAG +
Preference number: 4 (lower is better)
Translates to: RAEVLHRRPALFLQARVDPLLGD*ASVDPE
Trigger: CTCAGGATCCACAGATGCCCAGTCTCCCAAGAGGGG...GTCCACCCTGGCCTGCAGGAACAAGGCAGGCCGCCTGTGGAGGACCTCAGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp GGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCCGGACCAGGCCCCTCTTaGGAGACTGGGCATCTGTGG +
Preference number: 4 (lower is better)
Translates to: GGHRRVSAWAQCLPTSPPGPGPS*ETGHLW
Trigger: CCACAGATGCCCAGTCTCCCAAGAGGGGCCTGGTCC...GGGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp AGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACTCAGCTGGCAGCGGGTaGCGGCCTCAGTCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: RVDTGVCLHGPNVCPPAHSAGSG*RPQSSA
Trigger: TGCAGAGGACTGAGGCCGCCACCCGCTGCCAGCTGA...GTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp GGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCCCCGTCTAGAGACAGCTaGTTCAGCTGGGCACGCGCG +
Preference number: 4 (lower is better)
Translates to: GGHRRVSAWAQCLPTSPPPSRDS*FSWARA
Trigger: CGCGCGTGCCCAGCTGAACCAGCTGTCTCTAGACGG...GGGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357198.9
CDS-3UTR CCA 90 bp GCCAGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCGGGTGGCTCAGGTCCTaGTGGCATCTCCCGAAGCTC +
Preference number: 4 (lower is better)
Translates to: ARVDTGVCLHGPNVCPPAGWLRS*WHLPKL
Trigger: GAGCTTCGGGAGATGCCACCAGGACCTGAGCCACCC...GGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp GGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCCGGGTGGCTCAGGTCCTaGTGGCATCTCCCGAAGCTC +
Preference number: 4 (lower is better)
Translates to: GGHRRVSAWAQCLPTSPPGWLRS*WHLPKL
Trigger: GAGCTTCGGGAGATGCCACCAGGACCTGAGCCACCC...GGGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp AGGGGCGGTACTGGCCGCACTAAAGGAAGTGAGCTGGAAGGAGGTGGCGGCCAGGGGTGGCTCAGGTCCTaGTGGCATCTCCCGAAGCTC +
Preference number: 4 (lower is better)
Translates to: RGGTGRTKGSELEGGGGQGWLRS*WHLPKL
Trigger: GAGCTTCGGGAGATGCCACCAGGACCTGAGCCACCC...CTGGCCGCCACCTCCTTCCAGCTCACTTCCTTTAGTGCGGCCAGTACCGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR CCA 90 bp AGGGCTGAGGTCCTCCACAGGCGGCCTGCCTTGTTCCTGCAGGCCAGGGTGGACTTTCCTGGACGTGGGTaGCTCAGGTCCTGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: RAEVLHRRPALFLQARVDFPGRG*LRSWWH
Trigger: ATGCCACCAGGACCTGAGCCACCCACGTCCAGGAAA...GTCCACCCTGGCCTGCAGGAACAAGGCAGGCCGCCTGTGGAGGACCTCAGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp GGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCCGGACGCCAGATCGTTaGGCTCCGGGCCTAGCAGTA +
Preference number: 4 (lower is better)
Translates to: GWTQACVCMGPMFAHQPTRTPDR*APGLAV
Trigger: TACTGCTAGGCCCGGAGCCCAACGATCTGGCGTCCG...GGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp GGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCCTGCCTGGGGGCCCACTaGCACGCTTGCACACTGAAG +
Preference number: 4 (lower is better)
Translates to: GGHRRVSAWAQCLPTSPPCLGAH*HACTLK
Trigger: CTTCAGTGTGCAAGCGTGCCAGTGGGCCCCCAGGCA...GGGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp GGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCCGGGACCTGTGTGTTCTaGCCTGCATCTCCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: GGHRRVSAWAQCLPTSPPGTCVF*PASPPG
Trigger: GCCTGGGGGAGATGCAGGCCAGAACACACAGGTCCC...GGGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000501403.6
CDS-3UTR GCA 90 bp GGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCTGTCGGAGCCGAACTTaGGCAGGAAGTGGTAGGGCC +
Preference number: 4 (lower is better)
Translates to: GWTQACVCMGPMFAHQPTCRSRT*AGSGRA
Trigger: GGCCCTACCACTTCCTGCGCAAGTTCGGCTCCGACA...GGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR GCA 90 bp GGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCGCCCACTGGCACGCTTaGACACTGAAGCGTAGAGCC +
Preference number: 4 (lower is better)
Translates to: GWTQACVCMGPMFAHQPTAHWHA*TLKRRA
Trigger: GGCTCTACGCTTCAGTGTGCAAGCGTGCCAGTGGGC...GGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR GCA 90 bp GCCAGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCGCCCACTGGCACGCTTaGACACTGAAGCGTAGAGCC +
Preference number: 4 (lower is better)
Translates to: ARVDTGVCLHGPNVCPPAAHWHA*TLKRRA
Trigger: GGCTCTACGCTTCAGTGTGCAAGCGTGCCAGTGGGC...GGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR GCA 90 bp AGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCTTGGCCTTGAAACCTaGCTGAGGGTCAGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: RVDTGVCLHGPNVCPPAHLGLET*LRVRAA
Trigger: GGCCGCCCTGACCCTCAGGCAGGTTTCAAGGCCAAG...GTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR GCA 90 bp GGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCCCATGGGCCCAATGTTTaGCCACCAGCCCACCCTCCT +
Preference number: 4 (lower is better)
Translates to: GGHRRVSAWAQCLPTSPPHGPNV*PPAHPP
Trigger: AGGAGGGTGGGCTGGTGGGCAAACATTGGGCCCATG...GGGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp AGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACGGACCAGGCCCCTCTTaGGAGACTGGGCATCTGTGG +
Preference number: 4 (lower is better)
Translates to: RVDTGVCLHGPNVCPPAHGPGPS*ETGHLW
Trigger: CCACAGATGCCCAGTCTCCCAAGAGGGGCCTGGTCC...GTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp GCTGCCCTACTAGGGAACAGGGTCTCTTGTGGCAGGGAGTGCCTGCCTTGCACTGGCTGGCTCCTAGGATaGCGCCAGGAGCAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: AALLGNRVSCGRECLPCTGWLLG*RQEQEQ
Trigger: CTGCTCCTGCTCCTGGCGCCATCCTAGGAGCCAGCC...AGTGCAAGGCAGGCACTCCCTGCCACAAGAGACCCTGTTCCCTAGTAGGGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp GGCTGTGGGCAGCTGTGTGCAGGCACTGAGGAGGTCTGGGCTCGCCCAAGGCCGAGGGGGAAGGGACTATaGAGAACAAAGAGGGGATGG +
Preference number: 4 (lower is better)
Translates to: GCGQLCAGTEEVWARPRPRGKGL*RTKRGW
Trigger: CCATCCCCTCTTTGTTCTCCATAGTCCCTTCCCCCT...CGGCCTTGGGCGAGCCCAGACCTCCTCAGTGCCTGCACACAGCTGCCCACAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp CGAGAGAGAACAGGGGGAAGGGACTATGGAGAACAAAGAGGGGATGGTGGGCAGGGCACTGAGGAGGTCTaGGCTCGCCCAAGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: RERTGGRDYGEQRGDGGQGTEEV*ARPRPG
Trigger: CCCCGGCCTTGGGCGAGCCCAGACCTCCTCAGTGCC...CTGCCCACCATCCCCTCTTTGTTCTCCATAGTCCCTTCCCCCTGTTCTCTCTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp CTGTGTGCAGGCACTGAGGAGGTCTGGGCTCGCCCAAGGCCGGGGACTTTGCCAGAACAGGGTCTCTTGTaGCAGGGAGTGCCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: LCAGTEEVWARPRPGTLPEQGLL*QGVPAL
Trigger: CAAGGCAGGCACTCCCTGCCACAAGAGACCCTGTTC...TGGCAAAGTCCCCGGCCTTGGGCGAGCCCAGACCTCCTCAGTGCCTGCACACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp AGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACGACAGCTGGTTCAGCTaGGCACGCGCGTCTGATCGC +
Preference number: 4 (lower is better)
Translates to: RVDTGVCLHGPNVCPPAHDSWFS*ARASDR
Trigger: GCGATCAGACGCGCGTGCCCAGCTGAACCAGCTGTC...GTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357198.9
CDS-3UTR CCA 90 bp GCCAGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCTGGCTCAGGTCCTGGTaGCATCTCCCGAAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: ARVDTGVCLHGPNVCPPAWLRSW*HLPKLS
Trigger: GGAGAGCTTCGGGAGATGCCACCAGGACCTGAGCCA...GGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp GGTTCTGGGGAGGAGAAAAGCTGCCCTACTAGGGAACAGGGTCTCTTGTGGCAGAGTAGCGGCAGGCTCTaGGGTCCGGGCTCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GSGEEKSCPTREQGLLWQSSGRL*GPGSAR
Trigger: CCTGGCCGAGCCCGGACCCCAGAGCCTGCCGCTACT...CTGCCACAAGAGACCCTGTTCCCTAGTAGGGCAGCTTTTCTCCTCCCCAGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR CCA 90 bp AGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCGGACGCCAGATCGTTaGGCTCCGGGCCTAGCAGTA +
Preference number: 4 (lower is better)
Translates to: RVDTGVCLHGPNVCPPAHRTPDR*APGLAV
Trigger: TACTGCTAGGCCCGGAGCCCAACGATCTGGCGTCCG...GTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp GAGCAGAGGAGGGAACGCAGCATGGAAGTCTTCAGGAAACTTCTCTCCCCCTGGCCCCACCGTGCAGCGTaGGGCTGGCCTCCAGCACAC +
Preference number: 4 (lower is better)
Translates to: EQRRERSMEVFRKLLSPWPHRAA*GWPPAH
Trigger: GTGTGCTGGAGGCCAGCCCCACGCTGCACGGTGGGG...CCAGGGGGAGAGAAGTTTCCTGAAGACTTCCATGCTGCGTTCCCTCCTCTGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR CCA 90 bp GCCAGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCTGTGGTAGATGGGACTaGTTGTGGGGCTGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: ARVDTGVCLHGPNVCPPACGRWD*LWGCGC
Trigger: GCAGCCGCAGCCCCACAACCAGTCCCATCTACCACA...GGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp GGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCGGCCGTTGTGGTAGATaGGACTGGTTGTGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GWTQACVCMGPMFAHQPTGRCGR*DWLWGC
Trigger: GCAGCCCCACAACCAGTCCCATCTACCACAACGGCC...GGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp GCCAGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCGGCCGTTGTGGTAGATaGGACTGGTTGTGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: ARVDTGVCLHGPNVCPPAGRCGR*DWLWGC
Trigger: GCAGCCCCACAACCAGTCCCATCTACCACAACGGCC...GGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR TCA 90 bp GCTGGAAAAGCTGCTGGTAGGATGAATGGGCGCAGGAGAGAGTGGGGACAGCTCCCTGGAGGCCTCCCTTaGCCACTCCACGCTGTCCGA +
Preference number: 4 (lower is better)
Translates to: AGKAAGRMNGRRREWGQLPGGLP*PLHAVR
Trigger: TCGGACAGCGTGGAGTGGTCAAGGGAGGCCTCCAGG...GAGCTGTCCCCACTCTCTCCTGCGCCCATTCATCCTACCAGCAGCTTTTCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000377112.8
CDS-3UTR TCA 90 bp GGAAGGAGGTGGCGGCCAGAGGATGAGGCTTGGACAGGAGAGAGCAAAAATTGTAGTCAGCCAGGCGGATaGCCCGTCGCTCCCCTCGCC +
Preference number: 4 (lower is better)
Translates to: GRRWRPEDEAWTGESKNCSQPGG*PVAPLA
Trigger: GGCGAGGGGAGCGACGGGTCATCCGCCTGGCTGACT...ACAATTTTTGCTCTCTCCTGTCCAAGCCTCATCCTCTGGCCGCCACCTCCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000510898.7
CDS-3UTR TCA 90 bp CTGTGTGCAGGCACTGAGGAGGTCTGGGCTCGCCCAAGGCCGGGGACTTTGCCATTCCAAGCTCTGAGGTaGAAGGAGCCGGGATCAGAG +
Preference number: 4 (lower is better)
Translates to: LCAGTEEVWARPRPGTLPFQALR*KEPGSE
Trigger: CTCTGATCCCGGCTCCTTTCACCTCAGAGCTTGGAA...TGGCAAAGTCCCCGGCCTTGGGCGAGCCCAGACCTCCTCAGTGCCTGCACACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR TCA 90 bp GCCAGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCTCTGCACACTATTCATaGGGAGGGCAGGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: ARVDTGVCLHGPNVCPPASAHYS*GGQGRA
Trigger: AGCCCTGCCCTGCCCTCCTCATGAATAGTGTGCAGA...GGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR TCA 90 bp AGGGGCGGTACTGGCCGCACTAAAGGAAGTGAGCTGGAAGGAGGTGGCGGCCAGTCTGCACACTATTCATaGGGAGGGCAGGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: RGGTGRTKGSELEGGGGQSAHYS*GGQGRA
Trigger: AGCCCTGCCCTGCCCTCCTCATGAATAGTGTGCAGA...CTGGCCGCCACCTCCTTCCAGCTCACTTCCTTTAGTGCGGCCAGTACCGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR GCA 90 bp AGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACTGTCGGAGCCGAACTTaGGCAGGAAGTGGTAGGGCC +
Preference number: 4 (lower is better)
Translates to: RVDTGVCLHGPNVCPPAHCRSRT*AGSGRA
Trigger: GGCCCTACCACTTCCTGCGCAAGTTCGGCTCCGACA...GTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR GCA 90 bp AGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCATAGAGGTGCTCATTaGCTGGGGGCCCACTGGCAC +
Preference number: 4 (lower is better)
Translates to: RVDTGVCLHGPNVCPPAHHRGAH*LGAHWH
Trigger: GTGCCAGTGGGCCCCCAGGCAATGAGCACCTCTATG...GTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR GCA 90 bp GAAGGGACTATGGAGAACAAAGAGGGGATGGTGGGCAGAGGCCTCGAAGAGCCATCAGGTTCCCCACCGTaGAGCGTGGGGCTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: EGTMENKEGMVGRGLEEPSGSPP*SVGLAS
Trigger: GGAGGCCAGCCCCACGCTGCACGGTGGGGAACCTGA...TGGCTCTTCGAGGCCTCTGCCCACCATCCCCTCTTTGTTCTCCATAGTCCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR CCA 90 bp AGAAAAGCTGCCCTACTAGGGAACAGGGTCTCTTGTGGCAGGGAGTGCCTGCCTCCCGGGAAGGCCAGCTaGCAGATGGGGCCCATCCAG +
Preference number: 4 (lower is better)
Translates to: RKAALLGNRVSCGRECLPPGKAS*QMGPIQ
Trigger: CTGGATGGGCCCCATCTGCCAGCTGGCCTTCCCGGG...AGGCAGGCACTCCCTGCCACAAGAGACCCTGTTCCCTAGTAGGGCAGCTTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000510898.7
CDS-3UTR CCA 90 bp AGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACGAGACTGGGCATCTGTaGATCCTGAGGAGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: RVDTGVCLHGPNVCPPAHETGHL*ILRRPP
Trigger: GGGAGGCCTCCTCAGGATCCACAGATGCCCAGTCTC...GTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp GGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCCTGGAGTTTTCCTCCATaGGGACCAGGCCCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: GGHRRVSAWAQCLPTSPPWSFPP*GPGPSW
Trigger: CCAAGAGGGGCCTGGTCCCCATGGAGGAAAACTCCA...GGGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp GCAGGCACTGAGGAGGTCTGGGCTCGCCCAAGGCCGGGGACTTTGCCAGACCAGGCCAGGAGGAGTAGATaGAGTTTTCCTCCATGGGGA +
Preference number: 4 (lower is better)
Translates to: AGTEEVWARPRPGTLPDQARRSR*SFPPWG
Trigger: TCCCCATGGAGGAAAACTCCATCTACTCCTCCTGGC...CTGGTCTGGCAAAGTCCCCGGCCTTGGGCGAGCCCAGACCTCCTCAGTGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp AGAAAAGCTGCCCTACTAGGGAACAGGGTCTCTTGTGGCAGGGAGTGCCTGCCTCAGCTGGATGGCGTCTaGGCCCAGCACCAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: RKAALLGNRVSCGRECLPQLDGV*AQHQQG
Trigger: GCCCTGCTGGTGCTGGGCCCAGACGCCATCCAGCTG...AGGCAGGCACTCCCTGCCACAAGAGACCCTGTTCCCTAGTAGGGCAGCTTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp GCAGGCACTGAGGAGGTCTGGGCTCGCCCAAGGCCGGGGACTTTGCCAGACCAGGAGGAGACTGACGCCTaGGGTTCCCAGAAGTATCTT +
Preference number: 4 (lower is better)
Translates to: AGTEEVWARPRPGTLPDQEETDA*GSQKYL
Trigger: AAGATACTTCTGGGAACCCCAGGCGTCAGTCTCCTC...CTGGTCTGGCAAAGTCCCCGGCCTTGGGCGAGCCCAGACCTCCTCAGTGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000377112.8
CDS-3UTR CCA 90 bp AGGGGCGGTACTGGCCGCACTAAAGGAAGTGAGCTGGAAGGAGGTGGCGGCCAGACAAAGAGGGGATGGTaGGCAGAGGCCTCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: RGGTGRTKGSELEGGGGQTKRGW*AEASKS
Trigger: GCTCTTCGAGGCCTCTGCCCACCATCCCCTCTTTGT...CTGGCCGCCACCTCCTTCCAGCTCACTTCCTTTAGTGCGGCCAGTACCGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp GCCAGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCGCATTTTCCTGGACGTaGGTGGCTCAGGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: ARVDTGVCLHGPNVCPPAAFSWT*VAQVLV
Trigger: CACCAGGACCTGAGCCACCCACGTCCAGGAAAATGC...GGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp GGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCGCATTTTCCTGGACGTaGGTGGCTCAGGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: GWTQACVCMGPMFAHQPTAFSWT*VAQVLV
Trigger: CACCAGGACCTGAGCCACCCACGTCCAGGAAAATGC...GGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp GGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCCCAGGTGCATTTTCCTaGACGTGGGTGGCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: GWTQACVCMGPMFAHQPTPGAFS*TWVAQV
Trigger: GACCTGAGCCACCCACGTCCAGGAAAATGCACCTGG...GGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp GGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCCCCAGGTGCATTTTCCTaGACGTGGGTGGCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: GGHRRVSAWAQCLPTSPPPGAFS*TWVAQV
Trigger: GACCTGAGCCACCCACGTCCAGGAAAATGCACCTGG...GGGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp TGGAGAACAAAGAGGGGATGGTGGGCAGAGGCCTCGAAGAGCCAGAAAAGGGTCAGATGGGACTGGTTGTaGGGCTGCGGCTGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: WRTKRGWWAEASKSQKRVRWDWL*GCGCRG
Trigger: GCCCCGGCAGCCGCAGCCCCACAACCAGTCCCATCT...GACCCTTTTCTGGCTCTTCGAGGCCTCTGCCCACCATCCCCTCTTTGTTCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR TCA 90 bp GCAGCATGGAAGTCTTCAGGAAACTTCTCTCCCCCTGGAATGTCGGCTCCCGGAGGCATCTGTGGATCCTaGGGAGGCCTCCCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: AAWKSSGNFSPPGMSAPGGICGS*GGLPCP
Trigger: GGGACAGGGGAGGCCTCCTCAGGATCCACAGATGCC...TCCGGGAGCCGACATTCCAGGGGGAGAGAAGTTTCCTGAAGACTTCCATGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR TCA 90 bp GGAGAGCCCGACCTGTTTCCCCAATATGCCTGTGAGGAGACATTGGGTGGGGATAGAGCCCTGGAGGCATaGCGCTTGCGTGCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GEPDLFPQYACEETLGGDRALEA*RLRAWL
Trigger: CAGCCACGCACGCAAGCGTCATGCCTCCAGGGCTCT...ATCCCCACCCAATGTCTCCTCACAGGCATATTGGGGAAACAGGTCGGGCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR TCA 90 bp CACTTGCAGATACGGTGGGAGAGCCCGACCTGTTTCCCCAATATGCCTGTGAGGAGAGCCCTGGAGGCATaGCGCTTGCGTGCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: HLQIRWESPTCFPNMPVRRALEA*RLRAWL
Trigger: CAGCCACGCACGCAAGCGTCATGCCTCCAGGGCTCT...CCTCACAGGCATATTGGGGAAACAGGTCGGGCTCTCCCACCGTATCTGCAAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR TCA 90 bp CGCCAGGAGCAGGAGCAGAGGAGGGAACGCAGCATGGAAGTCTTCAGGAAACTTGCCTTGAAACCTGCCTaGGGGTCAGGGCGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: RQEQEQRRERSMEVFRKLALKPA*GSGRPV
Trigger: CACAGGCCGCCCTGACCCTCAGGCAGGTTTCAAGGC...AAGTTTCCTGAAGACTTCCATGCTGCGTTCCCTCCTCTGCTCCTGCTCCTGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR TCA 90 bp AGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACTCTGCACACTATTCATaGGGAGGGCAGGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: RVDTGVCLHGPNVCPPAHSAHYS*GGQGRA
Trigger: AGCCCTGCCCTGCCCTCCTCATGAATAGTGTGCAGA...GTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR TCA 90 bp GCAGGCACTGAGGAGGTCTGGGCTCGCCCAAGGCCGGGGACTTTGCCAGACCAGTGCCGGGAGCTGCTCTaGGCTTTATTATCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: AGTEEVWARPRPGTLPDQCRELL*ALLSVS
Trigger: ACTCACAGATAATAAAGCTCAGAGCAGCTCCCGGCA...CTGGTCTGGCAAAGTCCCCGGCCTTGGGCGAGCCCAGACCTCCTCAGTGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR GCA 90 bp GCTGGAAAAGCTGCTGGTAGGATGAATGGGCGCAGGAGAGAGTGGGGACAGCTCGCTTCAAGACCACTGTaGTGCCTGGGGCGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: AGKAAGRMNGRRREWGQLASRPL*CLGRLA
Trigger: GGCCAACCGCCCCAGGCAGCACAGTGGTCTTGAAGC...GAGCTGTCCCCACTCTCTCCTGCGCCCATTCATCCTACCAGCAGCTTTTCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312943.10
CDS-3UTR GCA 90 bp GATACGGTGGGAGAGCCCGACCTGTTTCCCCAATATGCCTGTGAGGAGACATTGCGACCTGTCACCCGCTaGTCCCAGGCCACCATCCCG +
Preference number: 4 (lower is better)
Translates to: DTVGEPDLFPQYACEETLRPVTR*SQATIP
Trigger: CGGGATGGTGGCCTGGGAGCAGCGGGTGACAGGTCG...CAATGTCTCCTCACAGGCATATTGGGGAAACAGGTCGGGCTCTCCCACCGTATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000510898.7
CDS-3UTR GCA 90 bp GCTGGAAAAGCTGCTGGTAGGATGAATGGGCGCAGGAGAGAGTGGGGACAGCTCTGTAGAGGGCCTGGGTaGCCTTGGCCTCCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: AGKAAGRMNGRRREWGQLCRGPG*PWPPSA
Trigger: AGCTGAGGGAGGCCAAGGGCACCCAGGCCCTCTACA...GAGCTGTCCCCACTCTCTCCTGCGCCCATTCATCCTACCAGCAGCTTTTCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR GCA 90 bp GGAGAGCCCGACCTGTTTCCCCAATATGCCTGTGAGGAGACATTGGGTGGGGATGGTCAGGGCGGCCTGTaGCCTCCACCTGATCCAGCT +
Preference number: 4 (lower is better)
Translates to: GEPDLFPQYACEETLGGDGQGGL*PPPDPA
Trigger: AGCTGGATCAGGTGGAGGGCACAGGCCGCCCTGACC...ATCCCCACCCAATGTCTCCTCACAGGCATATTGGGGAAACAGGTCGGGCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR GCA 90 bp GGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCCACACAGGCGTGTGTCTaGATGGGCCCAATGTTTGCC +
Preference number: 4 (lower is better)
Translates to: GGHRRVSAWAQCLPTSPPTQACV*MGPMFA
Trigger: GGCAAACATTGGGCCCATGCAGACACACGCCTGTGT...GGGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR GCA 90 bp GGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCCGCCCCTGCCGGGAGCTaGTCTGAGCTTTATTATCTG +
Preference number: 4 (lower is better)
Translates to: GGHRRVSAWAQCLPTSPPAPAGS*SELYYL
Trigger: CAGATAATAAAGCTCAGAGCAGCTCCCGGCAGGGGC...GGGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357198.9
ENST00000510898.7
CDS-3UTR CCA 90 bp TCTCTTGTGGCAGGGAGTGCCTGCCTTGCACTGTTAAGAAGGATGCAGGCAGTCAGGCCAGCTGGCAGATaGGGCCCATCCAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: SLVAGSACLALLRRMQAVRPAGR*GPSRPG
Trigger: GCCAGGCCTGGATGGGCCCCATCTGCCAGCTGGCCT...GACTGCCTGCATCCTTCTTAACAGTGCAAGGCAGGCACTCCCTGCCACAAGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000510898.7
CDS-3UTR CCA 90 bp AGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCCCCTCTTGGGAGACTaGGCATCTGTGGATCCTGAG +
Preference number: 4 (lower is better)
Translates to: RVDTGVCLHGPNVCPPAHPLLGD*ASVDPE
Trigger: CTCAGGATCCACAGATGCCCAGTCTCCCAAGAGGGG...GTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp GAACAAAGAGGGGATGGTGGGCAGAGGCCTCGAAGAGCCAGAAAAGGGTCCCTGGGACCAGGCCCCTCTTaGGAGACTGGGCATCTGTGG +
Preference number: 4 (lower is better)
Translates to: EQRGDGGQRPRRARKGSLGPGPS*ETGHLW
Trigger: CCACAGATGCCCAGTCTCCCAAGAGGGGCCTGGTCC...CAGGGACCCTTTTCTGGCTCTTCGAGGCCTCTGCCCACCATCCCCTCTTTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp AGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACTGGAGTTTTCCTCCATaGGGACCAGGCCCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: RVDTGVCLHGPNVCPPAHWSFPP*GPGPSW
Trigger: CCAAGAGGGGCCTGGTCCCCATGGAGGAAAACTCCA...GTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp CGAGAGAGAACAGGGGGAAGGGACTATGGAGAACAAAGAGGGGATGGTGGGCAGTCAGCTGGCAGCGGGTaGCGGCCTCAGTCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: RERTGGRDYGEQRGDGGQSAGSG*RPQSSA
Trigger: TGCAGAGGACTGAGGCCGCCACCCGCTGCCAGCTGA...CTGCCCACCATCCCCTCTTTGTTCTCCATAGTCCCTTCCCCCTGTTCTCTCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp GGGGACAGACACTGTTTCTACTGTAGGGGTAGGAAGAAGACAGATGGATGCCAGGCCGGCCCCTTCAGCTaGCAGCGGGTGGCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: GDRHCFYCRGRKKTDGCQAGPFS*QRVAAS
Trigger: TGAGGCCGCCACCCGCTGCCAGCTGAAGGGGCCGGC...CTGGCATCCATCTGTCTTCTTCCTACCCCTACAGTAGAAACAGTGTCTGTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp GAAGGAGGTGGCGGCCAGAGGATGAGGCTTGGACAGGAGAGAGCAAAAATTGTGCAGCTGGATGGCGTCTaGGCCCAGCACCAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: EGGGGQRMRLGQERAKIVQLDGV*AQHQQG
Trigger: GCCCTGCTGGTGCTGGGCCCAGACGCCATCCAGCTG...CACAATTTTTGCTCTCTCCTGTCCAAGCCTCATCCTCTGGCCGCCACCTCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp GAACAAAGAGGGGATGGTGGGCAGAGGCCTCGAAGAGCCAGAAAAGGGTCCCTGGGGCAGTCAGAGCCCTaGAGGCATGACGCTTGCGTG +
Preference number: 4 (lower is better)
Translates to: EQRGDGGQRPRRARKGSLGQSEP*RHDACV
Trigger: CACGCAAGCGTCATGCCTCCAGGGCTCTGACTGCCC...CAGGGACCCTTTTCTGGCTCTTCGAGGCCTCTGCCCACCATCCCCTCTTTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp GCTGGAAAAGCTGCTGGTAGGATGAATGGGCGCAGGAGAGAGTGGGGACAGCTCGGGCAGTCAGAGCCCTaGAGGCATGACGCTTGCGTG +
Preference number: 4 (lower is better)
Translates to: AGKAAGRMNGRRREWGQLGQSEP*RHDACV
Trigger: CACGCAAGCGTCATGCCTCCAGGGCTCTGACTGCCC...GAGCTGTCCCCACTCTCTCCTGCGCCCATTCATCCTACCAGCAGCTTTTCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp AGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACTTTCCTGGACGTGGGTaGCTCAGGTCCTGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: RVDTGVCLHGPNVCPPAHFPGRG*LRSWWH
Trigger: ATGCCACCAGGACCTGAGCCACCCACGTCCAGGAAA...GTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR GCA 90 bp TGGAGAACAAAGAGGGGATGGTGGGCAGAGGCCTCGAAGAGCCAGAAAAGGGTCGCGGCCTCAGTCCTCTaGACCACCACGGGAAACTCG +
Preference number: 4 (lower is better)
Translates to: WRTKRGWWAEASKSQKRVAASVL*TTTGNS
Trigger: CGAGTTTCCCGTGGTGGTGCAGAGGACTGAGGCCGC...GACCCTTTTCTGGCTCTTCGAGGCCTCTGCCCACCATCCCCTCTTTGTTCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR GCA 90 bp GCTGGAAAAGCTGCTGGTAGGATGAATGGGCGCAGGAGAGAGTGGGGACAGCTCTGTCGGAGCCGAACTTaGGCAGGAAGTGGTAGGGCC +
Preference number: 4 (lower is better)
Translates to: AGKAAGRMNGRRREWGQLCRSRT*AGSGRA
Trigger: GGCCCTACCACTTCCTGCGCAAGTTCGGCTCCGACA...GAGCTGTCCCCACTCTCTCCTGCGCCCATTCATCCTACCAGCAGCTTTTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR GCA 90 bp GCTGGAAAAGCTGCTGGTAGGATGAATGGGCGCAGGAGAGAGTGGGGACAGCTCTGGAGGCATGACGCTTaGGTGCGTGGCTGGCTCCTA +
Preference number: 4 (lower is better)
Translates to: AGKAAGRMNGRRREWGQLWRHDA*VRGWLL
Trigger: TAGGAGCCAGCCACGCACGCAAGCGTCATGCCTCCA...GAGCTGTCCCCACTCTCTCCTGCGCCCATTCATCCTACCAGCAGCTTTTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR GCA 90 bp GGAGAGCCCGACCTGTTTCCCCAATATGCCTGTGAGGAGACATTGGGTGGGGATCCGGGCTCGGCCAGGTaGATTTTCCTGGACGTGGGT +
Preference number: 4 (lower is better)
Translates to: GEPDLFPQYACEETLGGDPGSAR*IFLDVG
Trigger: ACCCACGTCCAGGAAAATGCACCTGGCCGAGCCCGG...ATCCCCACCCAATGTCTCCTCACAGGCATATTGGGGAAACAGGTCGGGCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR GCA 90 bp AGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACACACAGGCGTGTGTCTaGATGGGCCCAATGTTTGCC +
Preference number: 4 (lower is better)
Translates to: RVDTGVCLHGPNVCPPAHTQACV*MGPMFA
Trigger: GGCAAACATTGGGCCCATGCAGACACACGCCTGTGT...GTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR GCA 90 bp ACGAGAGAGAACAGGGGGAAGGGACTATGGAGAACAAAGAGGGGATGGTGGGCAGAGACAGCACTGTGCTaGCTGGGGCGGTTGGCCACC +
Preference number: 4 (lower is better)
Translates to: TRENRGKGLWRTKRGWWAETALC*LGRLAT
Trigger: GGTGGCCAACCGCCCCAGGCAGCACAGTGCTGTCTC...TGCCCACCATCCCCTCTTTGTTCTCCATAGTCCCTTCCCCCTGTTCTCTCTCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377112.8
CDS-3UTR GCA 90 bp GCTGCCCTACTAGGGAACAGGGTCTCTTGTGGCAGGGAGTGCCTGCCTTGCACTCGTGTCACTCGGCCGTaGAGAGCAACATGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: AALLGNRVSCGRECLPCTRVTRP*RATWSP
Trigger: AGGACTCCATGTTGCTCTGCACGGCCGAGTGACACG...AGTGCAAGGCAGGCACTCCCTGCCACAAGAGACCCTGTTCCCTAGTAGGGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR CCA 90 bp CGAGAGAGAACAGGGGGAAGGGACTATGGAGAACAAAGAGGGGATGGTGGGCAGGACCACTGTGCTGCCTaGGGCGGTTGGCCACCTCTT +
Preference number: 4 (lower is better)
Translates to: RERTGGRDYGEQRGDGGQDHCAA*GGWPPL
Trigger: AAGAGGTGGCCAACCGCCCCAGGCAGCACAGTGGTC...CTGCCCACCATCCCCTCTTTGTTCTCCATAGTCCCTTCCCCCTGTTCTCTCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312943.10
CDS-3UTR CCA 90 bp AGAAAAGCTGCCCTACTAGGGAACAGGGTCTCTTGTGGCAGGGAGTGCCTGCCTTCTCCAGAGGGTCCATaGTCACGGCCAGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: RKAALLGNRVSCGRECLPSPEGP*SRPGAG
Trigger: CCCTGCTCCTGGCCGTGACCATGGACCCTCTGGAGA...AGGCAGGCACTCCCTGCCACAAGAGACCCTGTTCCCTAGTAGGGCAGCTTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp CACTTGCAGATACGGTGGGAGAGCCCGACCTGTTTCCCCAATATGCCTGTGAGGTCTCCAGAGGGTCCATaGTCACGGCCAGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: HLQIRWESPTCFPNMPVRSPEGP*SRPGAG
Trigger: CCCTGCTCCTGGCCGTGACCATGGACCCTCTGGAGA...CCTCACAGGCATATTGGGGAAACAGGTCGGGCTCTCCCACCGTATCTGCAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp TGGAGAACAAAGAGGGGATGGTGGGCAGAGGCCTCGAAGAGCCAGAAAAGGGTCGGACCAGGCCCCTCTTaGGAGACTGGGCATCTGTGG +
Preference number: 4 (lower is better)
Translates to: WRTKRGWWAEASKSQKRVGPGPS*ETGHLW
Trigger: CCACAGATGCCCAGTCTCCCAAGAGGGGCCTGGTCC...GACCCTTTTCTGGCTCTTCGAGGCCTCTGCCCACCATCCCCTCTTTGTTCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp CACTTGCAGATACGGTGGGAGAGCCCGACCTGTTTCCCCAATATGCCTGTGAGGGGACCAGGCCCCTCTTaGGAGACTGGGCATCTGTGG +
Preference number: 4 (lower is better)
Translates to: HLQIRWESPTCFPNMPVRGPGPS*ETGHLW
Trigger: CCACAGATGCCCAGTCTCCCAAGAGGGGCCTGGTCC...CCTCACAGGCATATTGGGGAAACAGGTCGGGCTCTCCCACCGTATCTGCAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp GGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCGCCAGGAGGAGTAGATaGAGTTTTCCTCCATGGGGA +
Preference number: 4 (lower is better)
Translates to: GWTQACVCMGPMFAHQPTARRSR*SFPPWG
Trigger: TCCCCATGGAGGAAAACTCCATCTACTCCTCCTGGC...GGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp GGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCCGCCAGGAGGAGTAGATaGAGTTTTCCTCCATGGGGA +
Preference number: 4 (lower is better)
Translates to: GGHRRVSAWAQCLPTSPPARRSR*SFPPWG
Trigger: TCCCCATGGAGGAAAACTCCATCTACTCCTCCTGGC...GGGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CCA 90 bp GATACGGTGGGAGAGCCCGACCTGTTTCCCCAATATGCCTGTGAGGAGACATTGCCTCCCTCAGCTGGATaGCGTCTGGGCCCAGCACCA +
Preference number: 4 (lower is better)
Translates to: DTVGEPDLFPQYACEETLPPSAG*RLGPAP
Trigger: TGGTGCTGGGCCCAGACGCCATCCAGCTGAGGGAGG...CAATGTCTCCTCACAGGCATATTGGGGAAACAGGTCGGGCTCTCCCACCGTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp CAGATACGGTGGGAGAGCCCGACCTGTTTCCCCAATATGCCTGTGAGGAGACATCCTCCCTCAGCTGGATaGCGTCTGGGCCCAGCACCA +
Preference number: 4 (lower is better)
Translates to: QIRWESPTCFPNMPVRRHPPSAG*RLGPAP
Trigger: TGGTGCTGGGCCCAGACGCCATCCAGCTGAGGGAGG...ATGTCTCCTCACAGGCATATTGGGGAAACAGGTCGGGCTCTCCCACCGTATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp GATACGGTGGGAGAGCCCGACCTGTTTCCCCAATATGCCTGTGAGGAGACATTGGCTTGCGTGCGTGGCTaGCTCCTAGGATGGCGCCAG +
Preference number: 4 (lower is better)
Translates to: DTVGEPDLFPQYACEETLACVRG*LLGWRQ
Trigger: CTGGCGCCATCCTAGGAGCCAGCCACGCACGCAAGC...CAATGTCTCCTCACAGGCATATTGGGGAAACAGGTCGGGCTCTCCCACCGTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp GCAGGCACTGAGGAGGTCTGGGCTCGCCCAAGGCCGGGGACTTTGCCAGACCAGTTAAATGGATTTCTCTaGCTGTGGGCAGCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: AGTEEVWARPRPGTLPDQLNGFL*LWAAVC
Trigger: GCACACAGCTGCCCACAGCCAGAGAAATCCATTTAA...CTGGTCTGGCAAAGTCCCCGGCCTTGGGCGAGCCCAGACCTCCTCAGTGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp CGCCAGGAGCAGGAGCAGAGGAGGGAACGCAGCATGGAAGTCTTCAGGAAACTTCGGACGCCAGATCGTTaGGCTCCGGGCCTAGCAGTA +
Preference number: 4 (lower is better)
Translates to: RQEQEQRRERSMEVFRKLRTPDR*APGLAV
Trigger: TACTGCTAGGCCCGGAGCCCAACGATCTGGCGTCCG...AAGTTTCCTGAAGACTTCCATGCTGCGTTCCCTCCTCTGCTCCTGCTCCTGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR CCA 90 bp GAACAAAGAGGGGATGGTGGGCAGAGGCCTCGAAGAGCCAGAAAAGGGTCCCTGTGTGGTAGATGGGACTaGTTGTGGGGCTGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: EQRGDGGQRPRRARKGSLCGRWD*LWGCGC
Trigger: GCAGCCGCAGCCCCACAACCAGTCCCATCTACCACA...CAGGGACCCTTTTCTGGCTCTTCGAGGCCTCTGCCCACCATCCCCTCTTTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR CCA 90 bp CAGGCAGTCTGCTTAAATGGATTTCTCTGGCTGTGGGCAGCTGTGTGCAGGCACTGGCCACCACTCTGCTaGGCGTTCAGGGCCGGTCAC +
Preference number: 4 (lower is better)
Translates to: QAVCLNGFLWLWAAVCRHWPPLC*AFRAGH
Trigger: GTGACCGGCCCTGAACGCCCAGCAGAGTGGTGGCCA...GTGCCTGCACACAGCTGCCCACAGCCAGAGAAATCCATTTAAGCAGACTGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR CCA 90 bp GGTTCTGGGGAGGAGAAAAGCTGCCCTACTAGGGAACAGGGTCTCTTGTGGCAGCAGCACTGTGCTGCCTaGGGCGGTTGGCCACCTCTT +
Preference number: 4 (lower is better)
Translates to: GSGEEKSCPTREQGLLWQQHCAA*GGWPPL
Trigger: AAGAGGTGGCCAACCGCCCCAGGCAGCACAGTGCTG...CTGCCACAAGAGACCCTGTTCCCTAGTAGGGCAGCTTTTCTCCTCCCCAGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377112.8
CDS-3UTR CCA 90 bp ACTATGGAGAACAAAGAGGGGATGGTGGGCAGAGGCCTCGAAGAGCCAGAAAAGCCGTCTAGAGACAGCTaGAGGGAGCCCCCGGCCACC +
Preference number: 4 (lower is better)
Translates to: TMENKEGMVGRGLEEPEKPSRDS*REPPAT
Trigger: GGTGGCCGGGGGCTCCCTCCAGCTGTCTCTAGACGG...CTTTTCTGGCTCTTCGAGGCCTCTGCCCACCATCCCCTCTTTGTTCTCCATAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR CCA 90 bp GAAGGGACTATGGAGAACAAAGAGGGGATGGTGGGCAGAGGCCTCGAAGAGCCAGGTCACCTGTGCCCCTaGAACCGGCACAGGGTGCTT +
Preference number: 4 (lower is better)
Translates to: EGTMENKEGMVGRGLEEPGHLCP*NRHRVL
Trigger: AAGCACCCTGTGCCGGTTCCAGGGGCACAGGTGACC...TGGCTCTTCGAGGCCTCTGCCCACCATCCCCTCTTTGTTCTCCATAGTCCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR TCA 90 bp CAGGCAGTCTGCTTAAATGGATTTCTCTGGCTGTGGGCAGCTGTGTGCAGGCACCAGGCCTGGCGGTGCTaGGCAGCCAGTAGATGGCTT +
Preference number: 4 (lower is better)
Translates to: QAVCLNGFLWLWAAVCRHQAWRC*AASRWL
Trigger: AAGCCATCTACTGGCTGCTCAGCACCGCCAGGCCTG...GTGCCTGCACACAGCTGCCCACAGCCAGAGAAATCCATTTAAGCAGACTGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000510898.7
CDS-3UTR TCA 90 bp CAGCTCAATTTTCCAAGCTCTGAGGTGAAAGGAGCCGGGATCAGAGCACAGCTGGGCATCTGTGGATCCTaGGGAGGCCTCCCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: QLNFPSSEVKGAGIRAQLGICGS*GGLPCP
Trigger: GGGACAGGGGAGGCCTCCTCAGGATCCACAGATGCC...CAGCTGTGCTCTGATCCCGGCTCCTTTCACCTCAGAGCTTGGAAAATTGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR TCA 90 bp GGAGAGCCCGACCTGTTTCCCCAATATGCCTGTGAGGAGACATTGGGTGGGGATAAGGGTGTGTGCAGCTaGGGTGGAGTTGCGGTGAGG +
Preference number: 4 (lower is better)
Translates to: GEPDLFPQYACEETLGGDKGVCS*GGVAVR
Trigger: CCTCACCGCAACTCCACCTCAGCTGCACACACCCTT...ATCCCCACCCAATGTCTCCTCACAGGCATATTGGGGAAACAGGTCGGGCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR TCA 90 bp ACTATGGAGAACAAAGAGGGGATGGTGGGCAGAGGCCTCGAAGAGCCAGAAAAGGGCACGCTTGCACACTaGAGCGTAGAGCCCGGACGC +
Preference number: 4 (lower is better)
Translates to: TMENKEGMVGRGLEEPEKGTLAH*SVEPGR
Trigger: GCGTCCGGGCTCTACGCTTCAGTGTGCAAGCGTGCC...CTTTTCTGGCTCTTCGAGGCCTCTGCCCACCATCCCCTCTTTGTTCTCCATAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR GCA 90 bp CAGGCAGTCTGCTTAAATGGATTTCTCTGGCTGTGGGCAGCTGTGTGCAGGCACGCGGCCTCAGTCCTCTaGACCACCACGGGAAACTCG +
Preference number: 4 (lower is better)
Translates to: QAVCLNGFLWLWAAVCRHAASVL*TTTGNS
Trigger: CGAGTTTCCCGTGGTGGTGCAGAGGACTGAGGCCGC...GTGCCTGCACACAGCTGCCCACAGCCAGAGAAATCCATTTAAGCAGACTGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR GCA 90 bp GATACGGTGGGAGAGCCCGACCTGTTTCCCCAATATGCCTGTGAGGAGACATTGCTTGGCCTTGAAACCTaGCTGAGGGTCAGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: DTVGEPDLFPQYACEETLLGLET*LRVRAA
Trigger: GGCCGCCCTGACCCTCAGGCAGGTTTCAAGGCCAAG...CAATGTCTCCTCACAGGCATATTGGGGAAACAGGTCGGGCTCTCCCACCGTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR GCA 90 bp ACTATGGAGAACAAAGAGGGGATGGTGGGCAGAGGCCTCGAAGAGCCAGAAAAGCTCTGGCCACCACTCTaGTGGGCGTTCAGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: TMENKEGMVGRGLEEPEKLWPPL*WAFRAG
Trigger: ACCGGCCCTGAACGCCCAGCAGAGTGGTGGCCAGAG...CTTTTCTGGCTCTTCGAGGCCTCTGCCCACCATCCCCTCTTTGTTCTCCATAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR GCA 90 bp GAAGGAGGTGGCGGCCAGAGGATGAGGCTTGGACAGGAGAGAGCAAAAATTGTGCTAGAGACAGCACTGTaGTGCCTGGGGCGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: EGGGGQRMRLGQERAKIVLETAL*CLGRLA
Trigger: GGCCAACCGCCCCAGGCAGCACAGTGCTGTCTCTAG...CACAATTTTTGCTCTCTCCTGTCCAAGCCTCATCCTCTGGCCGCCACCTCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377112.8
CDS-3UTR CCA 90 bp GAAGGGACTATGGAGAACAAAGAGGGGATGGTGGGCAGAGGCCTCGAAGAGCCAGAGACTGGGCATCTGTaGATCCTGAGGAGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: EGTMENKEGMVGRGLEEPETGHL*ILRRPP
Trigger: GGGAGGCCTCCTCAGGATCCACAGATGCCCAGTCTC...TGGCTCTTCGAGGCCTCTGCCCACCATCCCCTCTTTGTTCTCCATAGTCCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp GGTAGGATGAATGGGCGCAGGAGAGAGTGGGGACAGCTCAATTTTCCAAGCTCTCCTCCCTCAGCTGGATaGCGTCTGGGCCCAGCACCA +
Preference number: 4 (lower is better)
Translates to: GRMNGRRREWGQLNFPSSPPSAG*RLGPAP
Trigger: TGGTGCTGGGCCCAGACGCCATCCAGCTGAGGGAGG...AGAGCTTGGAAAATTGAGCTGTCCCCACTCTCTCCTGCGCCCATTCATCCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp GGGATCAGAGCACAGCTGGGGACAGACACTGTTTCTACTGTAGGGGTAGGAAGAGCTTGCGTGCGTGGCTaGCTCCTAGGATGGCGCCAG +
Preference number: 4 (lower is better)
Translates to: GIRAQLGTDTVSTVGVGRACVRG*LLGWRQ
Trigger: CTGGCGCCATCCTAGGAGCCAGCCACGCACGCAAGC...TCTTCCTACCCCTACAGTAGAAACAGTGTCTGTCCCCAGCTGTGCTCTGATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp GAAGGAGGTGGCGGCCAGAGGATGAGGCTTGGACAGGAGAGAGCAAAAATTGTGTGCCTGGGGGCCCACTaGCACGCTTGCACACTGAAG +
Preference number: 4 (lower is better)
Translates to: EGGGGQRMRLGQERAKIVCLGAH*HACTLK
Trigger: CTTCAGTGTGCAAGCGTGCCAGTGGGCCCCCAGGCA...CACAATTTTTGCTCTCTCCTGTCCAAGCCTCATCCTCTGGCCGCCACCTCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR TCA 90 bp GGTAGGATGAATGGGCGCAGGAGAGAGTGGGGACAGCTCAATTTTCCAAGCTCTCCCAGCGCCTGGCACTaGGTAGGCACGCAGCAAACT +
Preference number: 4 (lower is better)
Translates to: GRMNGRRREWGQLNFPSSPSAWH*VGTQQT
Trigger: AGTTTGCTGCGTGCCTACTCAGTGCCAGGCGCTGGG...AGAGCTTGGAAAATTGAGCTGTCCCCACTCTCTCCTGCGCCCATTCATCCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR TCA 90 bp AGGGGCGGTACTGGCCGCACTAAAGGAAGTGAGCTGGAAGGAGGTGGCGGCCAGAGGGGAGAATGGGGGTaGGAAAGTGGAAATGAAAGT +
Preference number: 4 (lower is better)
Translates to: RGGTGRTKGSELEGGGGQRGEWG*ESGNES
Trigger: ACTTTCATTTCCACTTTCTCACCCCCATTCTCCCCT...CTGGCCGCCACCTCCTTCCAGCTCACTTCCTTTAGTGCGGCCAGTACCGCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR TCA 90 bp GGCTGTGGGCAGCTGTGTGCAGGCACTGAGGAGGTCTGGGCTCGCCCAAGGCCGGAGCTTTATTATCTGTaGGTCTGCACACTATTCATG +
Preference number: 4 (lower is better)
Translates to: GCGQLCAGTEEVWARPRPELYYL*VCTLFM
Trigger: CATGAATAGTGTGCAGACTCACAGATAATAAAGCTC...CGGCCTTGGGCGAGCCCAGACCTCCTCAGTGCCTGCACACAGCTGCCCACAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR TCA 90 bp AGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACTGCCGGGAGCTGCTCTaGGCTTTATTATCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: RVDTGVCLHGPNVCPPAHCRELL*ALLSVS
Trigger: ACTCACAGATAATAAAGCTCAGAGCAGCTCCCGGCA...GTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357198.9
ENST00000510898.7
CDS-3UTR GCA 90 bp GGTAGGATGAATGGGCGCAGGAGAGAGTGGGGACAGCTCAATTTTCCAAGCTCTGCGGCCTCAGTCCTCTaGACCACCACGGGAAACTCG +
Preference number: 4 (lower is better)
Translates to: GRMNGRRREWGQLNFPSSAASVL*TTTGNS
Trigger: CGAGTTTCCCGTGGTGGTGCAGAGGACTGAGGCCGC...AGAGCTTGGAAAATTGAGCTGTCCCCACTCTCTCCTGCGCCCATTCATCCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR GCA 90 bp GCTGCCCTACTAGGGAACAGGGTCTCTTGTGGCAGGGAGTGCCTGCCTTGCACTATGAGGTTCAGGATGTaGCAAGGGTGTGTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: AALLGNRVSCGRECLPCTMRFRM*QGCVQL
Trigger: CAGCTGCACACACCCTTGGCACATCCTGAACCTCAT...AGTGCAAGGCAGGCACTCCCTGCCACAAGAGACCCTGTTCCCTAGTAGGGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR GCA 90 bp GAGCAGGAGCAGAGGAGGGAACGCAGCATGGAAGTCTTCAGGAAACTTCTCTCCCATAGAGGTGCTCATTaGCTGGGGGCCCACTGGCAC +
Preference number: 4 (lower is better)
Translates to: EQEQRRERSMEVFRKLLSHRGAH*LGAHWH
Trigger: GTGCCAGTGGGCCCCCAGGCAATGAGCACCTCTATG...GGAGAGAAGTTTCCTGAAGACTTCCATGCTGCGTTCCCTCCTCTGCTCCTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR CCA 90 bp GAACAAAGAGGGGATGGTGGGCAGAGGCCTCGAAGAGCCAGAAAAGGGTCCCTGGGTATACACTCACGCTaGGCATCCAGTCCACATGGG +
Preference number: 4 (lower is better)
Translates to: EQRGDGGQRPRRARKGSLGIHSR*ASSPHG
Trigger: CCCATGTGGACTGGATGCCCAGCGTGAGTGTATACC...CAGGGACCCTTTTCTGGCTCTTCGAGGCCTCTGCCCACCATCCCCTCTTTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312943.10
CDS-3UTR CCA 90 bp AGAAAAGCTGCCCTACTAGGGAACAGGGTCTCTTGTGGCAGGGAGTGCCTGCCTTGGAGTTTTCCTCCATaGGGACCAGGCCCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: RKAALLGNRVSCGRECLPWSFPP*GPGPSW
Trigger: CCAAGAGGGGCCTGGTCCCCATGGAGGAAAACTCCA...AGGCAGGCACTCCCTGCCACAAGAGACCCTGTTCCCTAGTAGGGCAGCTTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp AGTGCCTGCCTTGCACTGTTAAGAAGGATGCAGGCAGTCTGCTTAAATGGATTTGCCGGCCCCTTCAGCTaGCAGCGGGTGGCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: SACLALLRRMQAVCLNGFAGPFS*QRVAAS
Trigger: TGAGGCCGCCACCCGCTGCCAGCTGAAGGGGCCGGC...AAATCCATTTAAGCAGACTGCCTGCATCCTTCTTAACAGTGCAAGGCAGGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp ATGAAACGAGAGAGAACAGGGGGAAGGGACTATGGAGAACAAAGAGGGGATGGTCAGCTGGATGGCGTCTaGGCCCAGCACCAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: MKRERTGGRDYGEQRGDGQLDGV*AQHQQG
Trigger: GCCCTGCTGGTGCTGGGCCCAGACGCCATCCAGCTG...ACCATCCCCTCTTTGTTCTCCATAGTCCCTTCCCCCTGTTCTCTCTCGTTTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp GGGGACAGACACTGTTTCTACTGTAGGGGTAGGAAGAAGACAGATGGATGCCAGGGCTGGCTCCTAGGATaGCGCCAGGAGCAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: GDRHCFYCRGRKKTDGCQGWLLG*RQEQEQ
Trigger: CTGCTCCTGCTCCTGGCGCCATCCTAGGAGCCAGCC...CTGGCATCCATCTGTCTTCTTCCTACCCCTACAGTAGAAACAGTGTCTGTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp GCTGGAAAAGCTGCTGGTAGGATGAATGGGCGCAGGAGAGAGTGGGGACAGCTCCTAAAGGAAGTGAGCTaGAAGGAGGTGGCGGCCAGA +
Preference number: 4 (lower is better)
Translates to: AGKAAGRMNGRRREWGQLLKEVS*KEVAAR
Trigger: TCTGGCCGCCACCTCCTTCCAGCTCACTTCCTTTAG...GAGCTGTCCCCACTCTCTCCTGCGCCCATTCATCCTACCAGCAGCTTTTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp GACACTGTTTCTACTGTAGGGGTAGGAAGAAGACAGATGGATGCCAGTACACTTGGGCCTGGTCAGCTCTaGCAGCCGCTCCCGCTGGCG +
Preference number: 4 (lower is better)
Translates to: DTVSTVGVGRRQMDASTLGPGQL*QPLPLA
Trigger: CGCCAGCGGGAGCGGCTGCCAGAGCTGACCAGGCCC...AAGTGTACTGGCATCCATCTGTCTTCTTCCTACCCCTACAGTAGAAACAGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR TCA 90 bp GGGGACAGACACTGTTTCTACTGTAGGGGTAGGAAGAAGACAGATGGATGCCAGCCCAGCGCCTGGCACTaGGTAGGCACGCAGCAAACT +
Preference number: 4 (lower is better)
Translates to: GDRHCFYCRGRKKTDGCQPSAWH*VGTQQT
Trigger: AGTTTGCTGCGTGCCTACTCAGTGCCAGGCGCTGGG...CTGGCATCCATCTGTCTTCTTCCTACCCCTACAGTAGAAACAGTGTCTGTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR TCA 90 bp AGAGCAACATGGAGTCCTAATGATTTCCATCCCGTCTGTCTGCTGCAGTGGGTTGAGGTGGAGTTGCGGTaGGGGGCTGGGCAGTCAGAG +
Preference number: 4 (lower is better)
Translates to: RATWSPNDFHPVCLLQWVEVELR*GAGQSE
Trigger: CTCTGACTGCCCAGCCCCTCACCGCAACTCCACCTC...AACCCACTGCAGCAGACAGACGGGATGGAAATCATTAGGACTCCATGTTGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR TCA 90 bp AGAAAAGCTGCCCTACTAGGGAACAGGGTCTCTTGTGGCAGGGAGTGCCTGCCTTCCCCAATATGCCTGTaGGGAGACATTGGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: RKAALLGNRVSCGRECLPSPICL*GDIGWG
Trigger: TCCCCACCCAATGTCTCCTCACAGGCATATTGGGGA...AGGCAGGCACTCCCTGCCACAAGAGACCCTGTTCCCTAGTAGGGCAGCTTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR GCA 90 bp AGAGCACAGCTGGGGACAGACACTGTTTCTACTGTAGGGGTAGGAAGAAGACAGTGTAGAGGGCCTGGGTaGCCTTGGCCTCCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: RAQLGTDTVSTVGVGRRQCRGPG*PWPPSA
Trigger: AGCTGAGGGAGGCCAAGGGCACCCAGGCCCTCTACA...CTGTCTTCTTCCTACCCCTACAGTAGAAACAGTGTCTGTCCCCAGCTGTGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR GCA 90 bp GGTAGGATGAATGGGCGCAGGAGAGAGTGGGGACAGCTCAATTTTCCAAGCTCTTGGAGGCATGACGCTTaGGTGCGTGGCTGGCTCCTA +
Preference number: 4 (lower is better)
Translates to: GRMNGRRREWGQLNFPSSWRHDA*VRGWLL
Trigger: TAGGAGCCAGCCACGCACGCAAGCGTCATGCCTCCA...AGAGCTTGGAAAATTGAGCTGTCCCCACTCTCTCCTGCGCCCATTCATCCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR GCA 90 bp GGGGACAGACACTGTTTCTACTGTAGGGGTAGGAAGAAGACAGATGGATGCCAGCAGCTGAGGTGGAGTTaGGGTGAGGGGCTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: GDRHCFYCRGRKKTDGCQQLRWS*GEGLGS
Trigger: ACTGCCCAGCCCCTCACCGCAACTCCACCTCAGCTG...CTGGCATCCATCTGTCTTCTTCCTACCCCTACAGTAGAAACAGTGTCTGTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR GCA 90 bp AGAGGAACAGAGAAACAGAGGTGGCCGAAGAGGAATGTGAGGTCAAGGGAAGGTCAGCTGAGGTGGAGTTaGGGTGAGGGGCTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: RGTEKQRWPKRNVRSREGQLRWS*GEGLGS
Trigger: ACTGCCCAGCCCCTCACCGCAACTCCACCTCAGCTG...ACCTTCCCTTGACCTCACATTCCTCTTCGGCCACCTCTGTTTCTCTGTTCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR GCA 90 bp GAACAAAGAGGGGATGGTGGGCAGAGGCCTCGAAGAGCCAGAAAAGGGTCCCTGATGAGGTTCAGGATGTaGCAAGGGTGTGTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: EQRGDGGQRPRRARKGSLMRFRM*QGCVQL
Trigger: CAGCTGCACACACCCTTGGCACATCCTGAACCTCAT...CAGGGACCCTTTTCTGGCTCTTCGAGGCCTCTGCCCACCATCCCCTCTTTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR GCA 90 bp CGAGAGAGAACAGGGGGAAGGGACTATGGAGAACAAAGAGGGGATGGTGGGCAGGGGGAGGAGAAAAGCTaGCCTACTAGGGAACAGGGT +
Preference number: 4 (lower is better)
Translates to: RERTGGRDYGEQRGDGGQGEEKS*PTREQG
Trigger: ACCCTGTTCCCTAGTAGGGCAGCTTTTCTCCTCCCC...CTGCCCACCATCCCCTCTTTGTTCTCCATAGTCCCTTCCCCCTGTTCTCTCTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR GCA 90 bp AAGCCTCACAGCTCCCTCCGCCTGCCTCTTCGTGTCACTCGGCCGTGCAGAGCAATTACAGAGCATGTTTaGGTGTGGCTGGAAAAGCTG +
Preference number: 4 (lower is better)
Translates to: KPHSSLRLPLRVTRPCRAITEHV*VWLEKL
Trigger: CAGCTTTTCCAGCCACACGCAAACATGCTCTGTAAT...TGCTCTGCACGGCCGAGTGACACGAAGAGGCAGGCGGAGGGAGCTGTGAGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR GCA 90 bp ACTATGGAGAACAAAGAGGGGATGGTGGGCAGAGGCCTCGAAGAGCCAGAAAAGCATGGGCCCAATGTTTaGCCACCAGCCCACCCTCCT +
Preference number: 4 (lower is better)
Translates to: TMENKEGMVGRGLEEPEKHGPNV*PPAHPP
Trigger: AGGAGGGTGGGCTGGTGGGCAAACATTGGGCCCATG...CTTTTCTGGCTCTTCGAGGCCTCTGCCCACCATCCCCTCTTTGTTCTCCATAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR GCA 90 bp TCTCTTGTGGCAGGGAGTGCCTGCCTTGCACTGTTAAGAAGGATGCAGGCAGTCTCCATCCCGTCTGTCTaGTGCAGTGGGTTTGAGCCC +
Preference number: 4 (lower is better)
Translates to: SLVAGSACLALLRRMQAVSIPSV*CSGFEP
Trigger: GGGCTCAAACCCACTGCAGCAGACAGACGGGATGGA...GACTGCCTGCATCCTTCTTAACAGTGCAAGGCAGGCACTCCCTGCCACAAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR CCA 90 bp GAAGGAGGTGGCGGCCAGAGGATGAGGCTTGGACAGGAGAGAGCAAAAATTGTGTGGAGTTTTCCTCCATaGGGACCAGGCCCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: EGGGGQRMRLGQERAKIVWSFPP*GPGPSW
Trigger: CCAAGAGGGGCCTGGTCCCCATGGAGGAAAACTCCA...CACAATTTTTGCTCTCTCCTGTCCAAGCCTCATCCTCTGGCCGCCACCTCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp CAAGAACCAGAGCCGAGTGCTGCTGAGAAGTCAAAGTCCTTGTTGCTTTTGTTTGGCACTGAGGAGGTCTaGGCTCGCCCAAGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: QEPEPSAAEKSKSLLLLFGTEEV*ARPRPG
Trigger: CCCCGGCCTTGGGCGAGCCCAGACCTCCTCAGTGCC...AAACAAAAGCAACAAGGACTTTGACTTCTCAGCAGCACTCGGCTCTGGTTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp CAGGCAGTCTGCTTAAATGGATTTCTCTGGCTGTGGGCAGCTGTGTGCAGGCACGCATTTTCCTGGACGTaGGTGGCTCAGGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: QAVCLNGFLWLWAAVCRHAFSWT*VAQVLV
Trigger: CACCAGGACCTGAGCCACCCACGTCCAGGAAAATGC...GTGCCTGCACACAGCTGCCCACAGCCAGAGAAATCCATTTAAGCAGACTGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR TCA 90 bp TCTACTGTAGGGGTAGGAAGAAGACAGATGGATGCCAGTACACTTGCAGATACGGAGGTGGAGTTGCGGTaGGGGGCTGGGCAGTCAGAG +
Preference number: 4 (lower is better)
Translates to: STVGVGRRQMDASTLADTEVELR*GAGQSE
Trigger: CTCTGACTGCCCAGCCCCTCACCGCAACTCCACCTC...CGTATCTGCAAGTGTACTGGCATCCATCTGTCTTCTTCCTACCCCTACAGTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR TCA 90 bp ACGAGAGAGAACAGGGGGAAGGGACTATGGAGAACAAAGAGGGGATGGTGGGCATTCCAAGCTCTGAGGTaGAAGGAGCCGGGATCAGAG +
Preference number: 4 (lower is better)
Translates to: TRENRGKGLWRTKRGWWAFQALR*KEPGSE
Trigger: CTCTGATCCCGGCTCCTTTCACCTCAGAGCTTGGAA...TGCCCACCATCCCCTCTTTGTTCTCCATAGTCCCTTCCCCCTGTTCTCTCTCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR TCA 90 bp AACCAGAGCCGAGTGCTGCTGAGAAGTCAAAGTCCTTGTTGCTTTTGTTTTGGACCTGTGCCCTCCACCTaGTCCAGCTCCAGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: NQSRVLLRSQSPCCFCFGPVPST*SSSSSR
Trigger: GCGGCTGCTGGAGCTGGATCAGGTGGAGGGCACAGG...TCCAAAACAAAAGCAACAAGGACTTTGACTTCTCAGCAGCACTCGGCTCTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR TCA 90 bp GGGATCAGAGCACAGCTGGGGACAGACACTGTTTCTACTGTAGGGGTAGGAAGAGGACGAGGGTGTCTCTaGAATCCCTTCCACCTGCAC +
Preference number: 4 (lower is better)
Translates to: GIRAQLGTDTVSTVGVGRGRGCL*NPFHLH
Trigger: GTGCAGGTGGAAGGGATTTCAGAGACACCCTCGTCC...TCTTCCTACCCCTACAGTAGAAACAGTGTCTGTCCCCAGCTGTGCTCTGATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR GCA 90 bp AACCAGAGCCGAGTGCTGCTGAGAAGTCAAAGTCCTTGTTGCTTTTGTTTTGGACGACCTGTCACCCGCTaGTCCCAGGCCACCATCCCG +
Preference number: 4 (lower is better)
Translates to: NQSRVLLRSQSPCCFCFGRPVTR*SQATIP
Trigger: CGGGATGGTGGCCTGGGAGCAGCGGGTGACAGGTCG...TCCAAAACAAAAGCAACAAGGACTTTGACTTCTCAGCAGCACTCGGCTCTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000510898.7
CDS-3UTR GCA 90 bp GGAGAGCCCGACCTGTTTCCCCAATATGCCTGTGAGGAGACATTGGGTGGGGATTCTTGTGGCAGGGAGTaGCTGCCTTGCACTGTTAAG +
Preference number: 4 (lower is better)
Translates to: GEPDLFPQYACEETLGGDSCGRE*LPCTVK
Trigger: CTTAACAGTGCAAGGCAGGCACTCCCTGCCACAAGA...ATCCCCACCCAATGTCTCCTCACAGGCATATTGGGGAAACAGGTCGGGCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR GCA 90 bp TGGAGAACAAAGAGGGGATGGTGGGCAGAGGCCTCGAAGAGCCAGAAAAGGGTCTCTTGTGGCAGGGAGTaGCTGCCTTGCACTGTTAAG +
Preference number: 4 (lower is better)
Translates to: WRTKRGWWAEASKSQKRVSCGRE*LPCTVK
Trigger: CTTAACAGTGCAAGGCAGGCACTCCCTGCCACAAGA...GACCCTTTTCTGGCTCTTCGAGGCCTCTGCCCACCATCCCCTCTTTGTTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR GCA 90 bp GAAGGAGGTGGCGGCCAGAGGATGAGGCTTGGACAGGAGAGAGCAAAAATTGTGGGGGAGGAGAAAAGCTaGCCTACTAGGGAACAGGGT +
Preference number: 4 (lower is better)
Translates to: EGGGGQRMRLGQERAKIVGEEKS*PTREQG
Trigger: ACCCTGTTCCCTAGTAGGGCAGCTTTTCTCCTCCCC...CACAATTTTTGCTCTCTCCTGTCCAAGCCTCATCCTCTGGCCGCCACCTCCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR GCA 90 bp TCTTGTGGCAGGGAGTGCCTGCCTTGCACTGTTAAGAAGGATGCAGGCAGTCTGGCCCCTGCCGGGAGCTaGTCTGAGCTTTATTATCTG +
Preference number: 4 (lower is better)
Translates to: SCGRECLPCTVKKDAGSLAPAGS*SELYYL
Trigger: CAGATAATAAAGCTCAGAGCAGCTCCCGGCAGGGGC...CAGACTGCCTGCATCCTTCTTAACAGTGCAAGGCAGGCACTCCCTGCCACAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR CCA 90 bp AGAGGAACAGAGAAACAGAGGTGGCCGAAGAGGAATGTGAGGTCAAGGGAAGGTGAGACTGGGCATCTGTaGATCCTGAGGAGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: RGTEKQRWPKRNVRSREGETGHL*ILRRPP
Trigger: GGGAGGCCTCCTCAGGATCCACAGATGCCCAGTCTC...ACCTTCCCTTGACCTCACATTCCTCTTCGGCCACCTCTGTTTCTCTGTTCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp ACGAGAGAGAACAGGGGGAAGGGACTATGGAGAACAAAGAGGGGATGGTGGGCACTAAAGGAAGTGAGCTaGAAGGAGGTGGCGGCCAGA +
Preference number: 4 (lower is better)
Translates to: TRENRGKGLWRTKRGWWALKEVS*KEVAAR
Trigger: TCTGGCCGCCACCTCCTTCCAGCTCACTTCCTTTAG...TGCCCACCATCCCCTCTTTGTTCTCCATAGTCCCTTCCCCCTGTTCTCTCTCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp GGGATCAGAGCACAGCTGGGGACAGACACTGTTTCTACTGTAGGGGTAGGAAGAACAAAGAGGGGATGGTaGGCAGAGGCCTCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: GIRAQLGTDTVSTVGVGRTKRGW*AEASKS
Trigger: GCTCTTCGAGGCCTCTGCCCACCATCCCCTCTTTGT...TCTTCCTACCCCTACAGTAGAAACAGTGTCTGTCCCCAGCTGTGCTCTGATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp CACTTGCAGATACGGTGGGAGAGCCCGACCTGTTTCCCCAATATGCCTGTGAGGATAGACAGGAGGTTCTaGGGAGGAGAAAAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: HLQIRWESPTCFPNMPVRIDRRF*GGEKLP
Trigger: GGGCAGCTTTTCTCCTCCCCAGAACCTCCTGTCTAT...CCTCACAGGCATATTGGGGAAACAGGTCGGGCTCTCCCACCGTATCTGCAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp CGAGAGAGAACAGGGGGAAGGGACTATGGAGAACAAAGAGGGGATGGTGGGCAGATAGACAGGAGGTTCTaGGGAGGAGAAAAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: RERTGGRDYGEQRGDGGQIDRRF*GGEKLP
Trigger: GGGCAGCTTTTCTCCTCCCCAGAACCTCCTGTCTAT...CTGCCCACCATCCCCTCTTTGTTCTCCATAGTCCCTTCCCCCTGTTCTCTCTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp GGAGGTTCTGGGGAGGAGAAAAGCTGCCCTACTAGGGAACAGGGTCTCTTGTGGATAGACAGGAGGTTCTaGGGAGGAGAAAAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: GGSGEEKSCPTREQGLLWIDRRF*GGEKLP
Trigger: GGGCAGCTTTTCTCCTCCCCAGAACCTCCTGTCTAT...CCACAAGAGACCCTGTTCCCTAGTAGGGCAGCTTTTCTCCTCCCCAGAACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp CAGGCAGTCTGCTTAAATGGATTTCTCTGGCTGTGGGCAGCTGTGTGCAGGCACCCTGTGAGGAGACATTaGGTGGGGATAGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: QAVCLNGFLWLWAAVCRHPVRRH*VGIDRR
Trigger: CCTCCTGTCTATCCCCACCCAATGTCTCCTCACAGG...GTGCCTGCACACAGCTGCCCACAGCCAGAGAAATCCATTTAAGCAGACTGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp GAGCAGGAGCAGAGGAGGGAACGCAGCATGGAAGTCTTCAGGAAACTTCTCTCCCCTGTGAGGAGACATTaGGTGGGGATAGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: EQEQRRERSMEVFRKLLSPVRRH*VGIDRR
Trigger: CCTCCTGTCTATCCCCACCCAATGTCTCCTCACAGG...GGAGAGAAGTTTCCTGAAGACTTCCATGCTGCGTTCCCTCCTCTGCTCCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR CCA 90 bp GGCTGTGGGCAGCTGTGTGCAGGCACTGAGGAGGTCTGGGCTCGCCCAAGGCCGTTGTTGCTTTTGTTTTaGAGAATAAGGTTGGTGACT +
Preference number: 4 (lower is better)
Translates to: GCGQLCAGTEEVWARPRPLLLLF*RIRLVT
Trigger: AGTCACCAACCTTATTCTCCAAAACAAAAGCAACAA...CGGCCTTGGGCGAGCCCAGACCTCCTCAGTGCCTGCACACAGCTGCCCACAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp GAAGGAGGTGGCGGCCAGAGGATGAGGCTTGGACAGGAGAGAGCAAAAATTGTGCTGAGCCTAGGACCCTaGGAAGAACTCAGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: EGGGGQRMRLGQERAKIVLSLGP*EELREG
Trigger: GCCTTCTCTGAGTTCTTCCCAGGGTCCTAGGCTCAG...CACAATTTTTGCTCTCTCCTGTCCAAGCCTCATCCTCTGGCCGCCACCTCCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000510898.7
CDS-3UTR TCA 90 bp TCTACTGTAGGGGTAGGAAGAAGACAGATGGATGCCAGTACACTTGCAGATACGCCCAGCGCCTGGCACTaGGTAGGCACGCAGCAAACT +
Preference number: 4 (lower is better)
Translates to: STVGVGRRQMDASTLADTPSAWH*VGTQQT
Trigger: AGTTTGCTGCGTGCCTACTCAGTGCCAGGCGCTGGG...CGTATCTGCAAGTGTACTGGCATCCATCTGTCTTCTTCCTACCCCTACAGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR TCA 90 bp GACACTGTTTCTACTGTAGGGGTAGGAAGAAGACAGATGGATGCCAGTACACTTGAGGTGGAGTTGCGGTaGGGGGCTGGGCAGTCAGAG +
Preference number: 4 (lower is better)
Translates to: DTVSTVGVGRRQMDASTLEVELR*GAGQSE
Trigger: CTCTGACTGCCCAGCCCCTCACCGCAACTCCACCTC...AAGTGTACTGGCATCCATCTGTCTTCTTCCTACCCCTACAGTAGAAACAGTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR TCA 90 bp ACGAGAGAGAACAGGGGGAAGGGACTATGGAGAACAAAGAGGGGATGGTGGGCAGCCAGACCAGTAAGATaGAACGAGAGAGAACAGGGG +
Preference number: 4 (lower is better)
Translates to: TRENRGKGLWRTKRGWWAARPVR*NEREQG
Trigger: CCCCTGTTCTCTCTCGTTTCATCTTACTGGTCTGGC...TGCCCACCATCCCCTCTTTGTTCTCCATAGTCCCTTCCCCCTGTTCTCTCTCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR TCA 90 bp GGACAGCTCAATTTTCCAAGCTCTGAGGTGAAAGGAGCCGGGATCAGAGCACAGTCCCCAATATGCCTGTaGGGAGACATTGGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: GQLNFPSSEVKGAGIRAQSPICL*GDIGWG
Trigger: TCCCCACCCAATGTCTCCTCACAGGCATATTGGGGA...CTGTGCTCTGATCCCGGCTCCTTTCACCTCAGAGCTTGGAAAATTGAGCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR TCA 90 bp ACTATGGAGAACAAAGAGGGGATGGTGGGCAGAGGCCTCGAAGAGCCAGAAAAGTTCCAAGCTCTGAGGTaGAAGGAGCCGGGATCAGAG +
Preference number: 4 (lower is better)
Translates to: TMENKEGMVGRGLEEPEKFQALR*KEPGSE
Trigger: CTCTGATCCCGGCTCCTTTCACCTCAGAGCTTGGAA...CTTTTCTGGCTCTTCGAGGCCTCTGCCCACCATCCCCTCTTTGTTCTCCATAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR TCA 90 bp GGAGAGCCCGACCTGTTTCCCCAATATGCCTGTGAGGAGACATTGGGTGGGGATCAATTTTCCAAGCTCTaGGGTGAAAGGAGCCGGGAT +
Preference number: 4 (lower is better)
Translates to: GEPDLFPQYACEETLGGDQFSKL*GERSRD
Trigger: ATCCCGGCTCCTTTCACCTCAGAGCTTGGAAAATTG...ATCCCCACCCAATGTCTCCTCACAGGCATATTGGGGAAACAGGTCGGGCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR TCA 90 bp GGAGAGCCCGACCTGTTTCCCCAATATGCCTGTGAGGAGACATTGGGTGGGGATAGAGCCGAGTGCTGCTaGGAAGTCAAAGTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: GEPDLFPQYACEETLGGDRAECC*EVKVLV
Trigger: AACAAGGACTTTGACTTCTCAGCAGCACTCGGCTCT...ATCCCCACCCAATGTCTCCTCACAGGCATATTGGGGAAACAGGTCGGGCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR TCA 90 bp CAAGAACCAGAGCCGAGTGCTGCTGAGAAGTCAAAGTCCTTGTTGCTTTTGTTTGGGCACAGGGGGTGCTaGAGGCAAAGAGGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: QEPEPSAAEKSKSLLLLFGHRGC*RQRGPH
Trigger: GTGAGGGCCTCTTTGCCTTCAGCACCCCCTGTGCCC...AAACAAAAGCAACAAGGACTTTGACTTCTCAGCAGCACTCGGCTCTGGTTCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR TCA 90 bp GGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCGAGCTTTATTATCTGTaGGTCTGCACACTATTCATG +
Preference number: 4 (lower is better)
Translates to: GWTQACVCMGPMFAHQPTELYYL*VCTLFM
Trigger: CATGAATAGTGTGCAGACTCACAGATAATAAAGCTC...GGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357198.9
ENST00000510898.7
CDS-3UTR GCA 90 bp GGTAGGATGAATGGGCGCAGGAGAGAGTGGGGACAGCTCAATTTTCCAAGCTCTGTGGCAGGGAGTGCCTaGCTTGCACTGTTAAGAAGG +
Preference number: 4 (lower is better)
Translates to: GRMNGRRREWGQLNFPSSVAGSA*LALLRR
Trigger: CCTTCTTAACAGTGCAAGGCAGGCACTCCCTGCCAC...AGAGCTTGGAAAATTGAGCTGTCCCCACTCTCTCCTGCGCCCATTCATCCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR GCA 90 bp GGGATCAGAGCACAGCTGGGGACAGACACTGTTTCTACTGTAGGGGTAGGAAGAGGGGAGGAGAAAAGCTaGCCTACTAGGGAACAGGGT +
Preference number: 4 (lower is better)
Translates to: GIRAQLGTDTVSTVGVGRGEEKS*PTREQG
Trigger: ACCCTGTTCCCTAGTAGGGCAGCTTTTCTCCTCCCC...TCTTCCTACCCCTACAGTAGAAACAGTGTCTGTCCCCAGCTGTGCTCTGATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp GGGGACAGACACTGTTTCTACTGTAGGGGTAGGAAGAAGACAGATGGATGCCAGCCCCTCTTGGGAGACTaGGCATCTGTGGATCCTGAG +
Preference number: 4 (lower is better)
Translates to: GDRHCFYCRGRKKTDGCQPLLGD*ASVDPE
Trigger: CTCAGGATCCACAGATGCCCAGTCTCCCAAGAGGGG...CTGGCATCCATCTGTCTTCTTCCTACCCCTACAGTAGAAACAGTGTCTGTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp CAGGCAGTCTGCTTAAATGGATTTCTCTGGCTGTGGGCAGCTGTGTGCAGGCACGCCAGGAGGAGTAGATaGAGTTTTCCTCCATGGGGA +
Preference number: 4 (lower is better)
Translates to: QAVCLNGFLWLWAAVCRHARRSR*SFPPWG
Trigger: TCCCCATGGAGGAAAACTCCATCTACTCCTCCTGGC...GTGCCTGCACACAGCTGCCCACAGCCAGAGAAATCCATTTAAGCAGACTGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp AGTGCTGCTGAGAAGTCAAAGTCCTTGTTGCTTTTGTTTTGGAGAATAAGGTTGGCCGGCCCCTTCAGCTaGCAGCGGGTGGCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: SAAEKSKSLLLLFWRIRLAGPFS*QRVAAS
Trigger: TGAGGCCGCCACCCGCTGCCAGCTGAAGGGGCCGGC...CAACCTTATTCTCCAAAACAAAAGCAACAAGGACTTTGACTTCTCAGCAGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp AGAAAAGCTGCCCTACTAGGGAACAGGGTCTCTTGTGGCAGGGAGTGCCTGCCTGGCAGCAGTAGAGGCTaGGAAGGAGATTGTTATGAG +
Preference number: 4 (lower is better)
Translates to: RKAALLGNRVSCGRECLPGSSRG*EGDCYE
Trigger: CTCATAACAATCTCCTTCCCAGCCTCTACTGCTGCC...AGGCAGGCACTCCCTGCCACAAGAGACCCTGTTCCCTAGTAGGGCAGCTTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000510898.7
CDS-3UTR CCA 90 bp AGTGCCTGCCTTGCACTGTTAAGAAGGATGCAGGCAGTCTGCTTAAATGGATTTCGTGCAGCGTGGGGCTaGCCTCCAGCACACACAGGT +
Preference number: 4 (lower is better)
Translates to: SACLALLRRMQAVCLNGFRAAWG*PPAHTG
Trigger: ACCTGTGTGTGCTGGAGGCCAGCCCCACGCTGCACG...AAATCCATTTAAGCAGACTGCCTGCATCCTTCTTAACAGTGCAAGGCAGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR CCA 90 bp TTTCAAGAACCAGAGCCGAGTGCTGCTGAGAAGTCAAAGTCCTTGTTGCTTTTGGCCTTCTCACGCACCTaGTTCAGCTGGGCACGCGCG +
Preference number: 4 (lower is better)
Translates to: FQEPEPSAAEKSKSLLLLAFSRT*FSWARA
Trigger: CGCGCGTGCCCAGCTGAACCAGGTGCGTGAGAAGGC...CAAAAGCAACAAGGACTTTGACTTCTCAGCAGCACTCGGCTCTGGTTCTTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR CCA 90 bp GCCAGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCGTATCTGCAAATTGTTaGAGTTTCAGCAGGGAACAA +
Preference number: 4 (lower is better)
Translates to: ARVDTGVCLHGPNVCPPAVSANC*SFSREQ
Trigger: TTGTTCCCTGCTGAAACTCCAACAATTTGCAGATAC...GGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR TCA 90 bp CAGGCAGTCTGCTTAAATGGATTTCTCTGGCTGTGGGCAGCTGTGTGCAGGCACCAATTTTCCAAGCTCTaGGGTGAAAGGAGCCGGGAT +
Preference number: 4 (lower is better)
Translates to: QAVCLNGFLWLWAAVCRHQFSKL*GERSRD
Trigger: ATCCCGGCTCCTTTCACCTCAGAGCTTGGAAAATTG...GTGCCTGCACACAGCTGCCCACAGCCAGAGAAATCCATTTAAGCAGACTGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR GCA 90 bp AGAGGAACAGAGAAACAGAGGTGGCCGAAGAGGAATGTGAGGTCAAGGGAAGGTGTGGCAGGGAGTGCCTaGCTTGCACTGTTAAGAAGG +
Preference number: 4 (lower is better)
Translates to: RGTEKQRWPKRNVRSREGVAGSA*LALLRR
Trigger: CCTTCTTAACAGTGCAAGGCAGGCACTCCCTGCCAC...ACCTTCCCTTGACCTCACATTCCTCTTCGGCCACCTCTGTTTCTCTGTTCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp AGGTGGCCGAAGAGGAATGTGAGGTCAAGGGAAGGTTTAAAATGTGAAATTACACCCGGGAAGGCCAGCTaGCAGATGGGGCCCATCCAG +
Preference number: 4 (lower is better)
Translates to: RWPKRNVRSREGLKCEITPGKAS*QMGPIQ
Trigger: CTGGATGGGCCCCATCTGCCAGCTGGCCTTCCCGGG...TGTAATTTCACATTTTAAACCTTCCCTTGACCTCACATTCCTCTTCGGCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000510898.7
CDS-3UTR CCA 90 bp GGGGACAGACACTGTTTCTACTGTAGGGGTAGGAAGAAGACAGATGGATGCCAGCCTGTGAGGAGACATTaGGTGGGGATAGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: GDRHCFYCRGRKKTDGCQPVRRH*VGIDRR
Trigger: CCTCCTGTCTATCCCCACCCAATGTCTCCTCACAGG...CTGGCATCCATCTGTCTTCTTCCTACCCCTACAGTAGAAACAGTGTCTGTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp GGCTTTCAGGAGATTCTTTGTGTAGCAGGGTTGAGCTACACTACATCTGAGCCTGGCCGTTGTGGTAGATaGGACTGGTTGTGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GFQEILCVAGLSYTTSEPGRCGR*DWLWGC
Trigger: GCAGCCCCACAACCAGTCCCATCTACCACAACGGCC...AGGCTCAGATGTAGTGTAGCTCAACCCTGCTACACAAAGAATCTCCTGAAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR CCA 90 bp AGGTGGCCGAAGAGGAATGTGAGGTCAAGGGAAGGTTTAAAATGTGAAATTACACCAGGGTACTGTCGTTaGCCGGGCCGGGCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: RWPKRNVRSREGLKCEITPGYCR*PGRASS
Trigger: TGAGCTGGCCCGGCCCGGCCAACGACAGTACCCTGG...TGTAATTTCACATTTTAAACCTTCCCTTGACCTCACATTCCTCTTCGGCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR CCA 90 bp AGAGCAACATGGAGTCCTAATGATTTCCATCCCGTCTGTCTGCTGCAGTGGGTTCTCCGGGTCTCCAGTTaGGCCCTCATGTTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: RATWSPNDFHPVCLLQWVLRVSS*ALMLLL
Trigger: AAGGAGCAACATGAGGGCCCAACTGGAGACCCGGAG...AACCCACTGCAGCAGACAGACGGGATGGAAATCATTAGGACTCCATGTTGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR TCA 90 bp GAGAATGGGGGTGAGAAAGTGGAAATGAAAGTAATCAACAACTCTTTTGAACAGAGTCAGCCAGGCGGATaGCCCGTCGCTCCCCTCGCC +
Preference number: 4 (lower is better)
Translates to: ENGGEKVEMKVINNSFEQSQPGG*PVAPLA
Trigger: GGCGAGGGGAGCGACGGGTCATCCGCCTGGCTGACT...CTGTTCAAAAGAGTTGTTGATTACTTTCATTTCCACTTTCTCACCCCCATTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000510898.7
CDS-3UTR TCA 90 bp GGTTCTGGGGAGGAGAAAAGCTGCCCTACTAGGGAACAGGGTCTCTTGTGGCAGATCAAGGATTATGCCTaGTACGTCATCGGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: GSGEEKSCPTREQGLLWQIKDYA*YVIGSL
Trigger: GAGAGAACCGATGACGTATCAGGCATAATCCTTGAT...CTGCCACAAGAGACCCTGTTCCCTAGTAGGGCAGCTTTTCTCCTCCCCAGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR TCA 90 bp AGAGCACAGCTGGGGACAGACACTGTTTCTACTGTAGGGGTAGGAAGAAGACAGGCCAGACCAGTAAGATaGAACGAGAGAGAACAGGGG +
Preference number: 4 (lower is better)
Translates to: RAQLGTDTVSTVGVGRRQARPVR*NEREQG
Trigger: CCCCTGTTCTCTCTCGTTTCATCTTACTGGTCTGGC...CTGTCTTCTTCCTACCCCTACAGTAGAAACAGTGTCTGTCCCCAGCTGTGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR TCA 90 bp GGGGACAGACACTGTTTCTACTGTAGGGGTAGGAAGAAGACAGATGGATGCCAGGCCAGACCAGTAAGATaGAACGAGAGAGAACAGGGG +
Preference number: 4 (lower is better)
Translates to: GDRHCFYCRGRKKTDGCQARPVR*NEREQG
Trigger: CCCCTGTTCTCTCTCGTTTCATCTTACTGGTCTGGC...CTGGCATCCATCTGTCTTCTTCCTACCCCTACAGTAGAAACAGTGTCTGTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR TCA 90 bp AACCAGAGCCGAGTGCTGCTGAGAAGTCAAAGTCCTTGTTGCTTTTGTTTTGGATTGTGTTGGCCGCAATaGACGTGGGCAGGGGCGTGT +
Preference number: 4 (lower is better)
Translates to: NQSRVLLRSQSPCCFCFGLCWPQ*TWAGAC
Trigger: ACACGCCCCTGCCCACGTTCATTGCGGCCAACACAA...TCCAAAACAAAAGCAACAAGGACTTTGACTTCTCAGCAGCACTCGGCTCTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR GCA 90 bp AGTGCCTGCCTTGCACTGTTAAGAAGGATGCAGGCAGTCTGCTTAAATGGATTTTGTCGGAGCCGAACTTaGGCAGGAAGTGGTAGGGCC +
Preference number: 4 (lower is better)
Translates to: SACLALLRRMQAVCLNGFCRSRT*AGSGRA
Trigger: GGCCCTACCACTTCCTGCGCAAGTTCGGCTCCGACA...AAATCCATTTAAGCAGACTGCCTGCATCCTTCTTAACAGTGCAAGGCAGGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR GCA 90 bp GATGAGGCTTGGACAGGAGAGAGCAAAAATTGTGTGTCCGTCATGAAAATGAGGTGGAGGCATGACGCTTaGGTGCGTGGCTGGCTCCTA +
Preference number: 4 (lower is better)
Translates to: DEAWTGESKNCVSVMKMRWRHDA*VRGWLL
Trigger: TAGGAGCCAGCCACGCACGCAAGCGTCATGCCTCCA...CCTCATTTTCATGACGGACACACAATTTTTGCTCTCTCCTGTCCAAGCCTCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR GCA 90 bp GGGATCAGAGCACAGCTGGGGACAGACACTGTTTCTACTGTAGGGGTAGGAAGAAGGGAGTGCCTGCCTTaGACTGTTAAGAAGGATGCA +
Preference number: 4 (lower is better)
Translates to: GIRAQLGTDTVSTVGVGRRECLP*TVKKDA
Trigger: TGCATCCTTCTTAACAGTGCAAGGCAGGCACTCCCT...TCTTCCTACCCCTACAGTAGAAACAGTGTCTGTCCCCAGCTGTGCTCTGATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp AGTGCCTGCCTTGCACTGTTAAGAAGGATGCAGGCAGTCTGCTTAAATGGATTTGAGACTGGGCATCTGTaGATCCTGAGGAGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: SACLALLRRMQAVCLNGFETGHL*ILRRPP
Trigger: GGGAGGCCTCCTCAGGATCCACAGATGCCCAGTCTC...AAATCCATTTAAGCAGACTGCCTGCATCCTTCTTAACAGTGCAAGGCAGGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp AGAGCACAGCTGGGGACAGACACTGTTTCTACTGTAGGGGTAGGAAGAAGACAGGAGGAGACTGACGCCTaGGGTTCCCAGAAGTATCTT +
Preference number: 4 (lower is better)
Translates to: RAQLGTDTVSTVGVGRRQEETDA*GSQKYL
Trigger: AAGATACTTCTGGGAACCCCAGGCGTCAGTCTCCTC...CTGTCTTCTTCCTACCCCTACAGTAGAAACAGTGTCTGTCCCCAGCTGTGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000377112.8
CDS-3UTR CCA 90 bp GGCTTTCAGGAGATTCTTTGTGTAGCAGGGTTGAGCTACACTACATCTGAGCCTGAACAGGGTCTCTTGTaGCAGGGAGTGCCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: GFQEILCVAGLSYTTSEPEQGLL*QGVPAL
Trigger: CAAGGCAGGCACTCCCTGCCACAAGAGACCCTGTTC...AGGCTCAGATGTAGTGTAGCTCAACCCTGCTACACAAAGAATCTCCTGAAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000510898.7
CDS-3UTR CCA 90 bp AGGTGGCCGAAGAGGAATGTGAGGTCAAGGGAAGGTTTAAAATGTGAAATTACAAGCAGCCGCCGGTACTaGGCCTCCAGGGTACTGTCG +
Preference number: 4 (lower is better)
Translates to: RWPKRNVRSREGLKCEITSSRRY*ASRVLS
Trigger: CGACAGTACCCTGGAGGCCCAGTACCGGCGGCTGCT...TGTAATTTCACATTTTAAACCTTCCCTTGACCTCACATTCCTCTTCGGCCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR TCA 90 bp CAGGCAGTCTGCTTAAATGGATTTCTCTGGCTGTGGGCAGCTGTGTGCAGGCACATCAAGGATTATGCCTaGTACGTCATCGGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: QAVCLNGFLWLWAAVCRHIKDYA*YVIGSL
Trigger: GAGAGAACCGATGACGTATCAGGCATAATCCTTGAT...GTGCCTGCACACAGCTGCCCACAGCCAGAGAAATCCATTTAAGCAGACTGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR GCA 90 bp AGGTGGCCGAAGAGGAATGTGAGGTCAAGGGAAGGTTTAAAATGTGAAATTACATGTAGAGGGCCTGGGTaGCCTTGGCCTCCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: RWPKRNVRSREGLKCEITCRGPG*PWPPSA
Trigger: AGCTGAGGGAGGCCAAGGGCACCCAGGCCCTCTACA...TGTAATTTCACATTTTAAACCTTCCCTTGACCTCACATTCCTCTTCGGCCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR GCA 90 bp GAGCAGAGGAGGGAACGCAGCATGGAAGTCTTCAGGAAACTTCTCTCCCCCTGGTCTCATCAAGGATTATaGCTGATACGTCATCGGTTC +
Preference number: 4 (lower is better)
Translates to: EQRRERSMEVFRKLLSPWSHQGL*LIRHRF
Trigger: GAACCGATGACGTATCAGGCATAATCCTTGATGAGA...CCAGGGGGAGAGAAGTTTCCTGAAGACTTCCATGCTGCGTTCCCTCCTCTGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR GCA 90 bp CAGGCAGTCTGCTTAAATGGATTTCTCTGGCTGTGGGCAGCTGTGTGCAGGCACATTACAGAGCATGTTTaGGTGTGGCTGGAAAAGCTG +
Preference number: 4 (lower is better)
Translates to: QAVCLNGFLWLWAAVCRHITEHV*VWLEKL
Trigger: CAGCTTTTCCAGCCACACGCAAACATGCTCTGTAAT...GTGCCTGCACACAGCTGCCCACAGCCAGAGAAATCCATTTAAGCAGACTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR GCA 90 bp TTCTACTGTAGGGGTAGGAAGAAGACAGATGGATGCCAGTACACTTGCAGATACATCCCGTCTGTCTGCTaGAGTGGGTTTGAGCCCACG +
Preference number: 4 (lower is better)
Translates to: FYCRGRKKTDGCQYTCRYIPSVC*SGFEPT
Trigger: CGTGGGCTCAAACCCACTGCAGCAGACAGACGGGAT...GTATCTGCAAGTGTACTGGCATCCATCTGTCTTCTTCCTACCCCTACAGTAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR CCA 90 bp CAGAGCCGAGTGCTGCTGAGAAGTCAAAGTCCTTGTTGCTTTTGTTTTGGAGAACCCCTCTTGGGAGACTaGGCATCTGTGGATCCTGAG +
Preference number: 4 (lower is better)
Translates to: QSRVLLRSQSPCCFCFGEPLLGD*ASVDPE
Trigger: CTCAGGATCCACAGATGCCCAGTCTCCCAAGAGGGG...TTCTCCAAAACAAAAGCAACAAGGACTTTGACTTCTCAGCAGCACTCGGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp TTTCAAGAACCAGAGCCGAGTGCTGCTGAGAAGTCAAAGTCCTTGTTGCTTTTGTGGAGTTTTCCTCCATaGGGACCAGGCCCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: FQEPEPSAAEKSKSLLLLWSFPP*GPGPSW
Trigger: CCAAGAGGGGCCTGGTCCCCATGGAGGAAAACTCCA...CAAAAGCAACAAGGACTTTGACTTCTCAGCAGCACTCGGCTCTGGTTCTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp AGTGCTGCTGAGAAGTCAAAGTCCTTGTTGCTTTTGTTTTGGAGAATAAGGTTGGCTTGCGTGCGTGGCTaGCTCCTAGGATGGCGCCAG +
Preference number: 4 (lower is better)
Translates to: SAAEKSKSLLLLFWRIRLACVRG*LLGWRQ
Trigger: CTGGCGCCATCCTAGGAGCCAGCCACGCACGCAAGC...CAACCTTATTCTCCAAAACAAAAGCAACAAGGACTTTGACTTCTCAGCAGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp ATGCAGGCAGTCTGCTTAAATGGATTTCTCTGGCTGTGGGCAGCTGTGTGCAGGCCAGAGGATGAGGCTTaGACAGGAGAGAGCAAAAAT +
Preference number: 4 (lower is better)
Translates to: MQAVCLNGFLWLWAAVCRPEDEA*TGESKN
Trigger: ATTTTTGCTCTCTCCTGTCCAAGCCTCATCCTCTGG...CCTGCACACAGCTGCCCACAGCCAGAGAAATCCATTTAAGCAGACTGCCTGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp GGGATCAGAGCACAGCTGGGGACAGACACTGTTTCTACTGTAGGGGTAGGAAGATTAAATGGATTTCTCTaGCTGTGGGCAGCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: GIRAQLGTDTVSTVGVGRLNGFL*LWAAVC
Trigger: GCACACAGCTGCCCACAGCCAGAGAAATCCATTTAA...TCTTCCTACCCCTACAGTAGAAACAGTGTCTGTCCCCAGCTGTGCTCTGATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp GACACTGTTTCTACTGTAGGGGTAGGAAGAAGACAGATGGATGCCAGTACACTTTTTCCTGGACGTGGGTaGCTCAGGTCCTGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: DTVSTVGVGRRQMDASTLFPGRG*LRSWWH
Trigger: ATGCCACCAGGACCTGAGCCACCCACGTCCAGGAAA...AAGTGTACTGGCATCCATCTGTCTTCTTCCTACCCCTACAGTAGAAACAGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR CCA 90 bp TTCTACTGTAGGGGTAGGAAGAAGACAGATGGATGCCAGTACACTTGCAGATACCCAGGTGCATTTTCCTaGACGTGGGTGGCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: FYCRGRKKTDGCQYTCRYPGAFS*TWVAQV
Trigger: GACCTGAGCCACCCACGTCCAGGAAAATGCACCTGG...GTATCTGCAAGTGTACTGGCATCCATCTGTCTTCTTCCTACCCCTACAGTAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR CCA 90 bp AGATCACTCACAGAACATGCATGGACATTTTTACAGGCTTTCAGGAGATTCTTTCCGGTCACAAGGGGCTaGGCCCTTCCTCCGCTCACG +
Preference number: 4 (lower is better)
Translates to: RSLTEHAWTFLQAFRRFFPVTRG*ALPPLT
Trigger: CGTGAGCGGAGGAAGGGCCCAGCCCCTTGTGACCGG...AAAGAATCTCCTGAAAGCCTGTAAAAATGTCCATGCATGTTCTGTGAGTGATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR TCA 90 bp GAGAATGGGGGTGAGAAAGTGGAAATGAAAGTAATCAACAACTCTTTTGAACAGCAGCCGTGCCACGCCTaGTGGGCCTCCTGCATACAG +
Preference number: 4 (lower is better)
Translates to: ENGGEKVEMKVINNSFEQQPCHA*WASCIQ
Trigger: CTGTATGCAGGAGGCCCATCAGGCGTGGCACGGCTG...CTGTTCAAAAGAGTTGTTGATTACTTTCATTTCCACTTTCTCACCCCCATTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000510898.7
CDS-3UTR TCA 90 bp AGATCACTCACAGAACATGCATGGACATTTTTACAGGCTTTCAGGAGATTCTTTGGCATCTGTGGATCCTaGGGAGGCCTCCCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: RSLTEHAWTFLQAFRRFFGICGS*GGLPCP
Trigger: GGGACAGGGGAGGCCTCCTCAGGATCCACAGATGCC...AAAGAATCTCCTGAAAGCCTGTAAAAATGTCCATGCATGTTCTGTGAGTGATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000510898.7
CDS-3UTR TCA 90 bp AACCAGAGCCGAGTGCTGCTGAGAAGTCAAAGTCCTTGTTGCTTTTGTTTTGGATCCCCAATATGCCTGTaGGGAGACATTGGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: NQSRVLLRSQSPCCFCFGSPICL*GDIGWG
Trigger: TCCCCACCCAATGTCTCCTCACAGGCATATTGGGGA...TCCAAAACAAAAGCAACAAGGACTTTGACTTCTCAGCAGCACTCGGCTCTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR TCA 90 bp AGAGGAACAGAGAAACAGAGGTGGCCGAAGAGGAATGTGAGGTCAAGGGAAGGTAGGGGAGAATGGGGGTaGGAAAGTGGAAATGAAAGT +
Preference number: 4 (lower is better)
Translates to: RGTEKQRWPKRNVRSREGRGEWG*ESGNES
Trigger: ACTTTCATTTCCACTTTCTCACCCCCATTCTCCCCT...ACCTTCCCTTGACCTCACATTCCTCTTCGGCCACCTCTGTTTCTCTGTTCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR GCA 90 bp AGTGCTGCTGAGAAGTCAAAGTCCTTGTTGCTTTTGTTTTGGAGAATAAGGTTGCAGCTGAGGTGGAGTTaGGGTGAGGGGCTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: SAAEKSKSLLLLFWRIRLQLRWS*GEGLGS
Trigger: ACTGCCCAGCCCCTCACCGCAACTCCACCTCAGCTG...CAACCTTATTCTCCAAAACAAAAGCAACAAGGACTTTGACTTCTCAGCAGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR GCA 90 bp GATGAGGCTTGGACAGGAGAGAGCAAAAATTGTGTGTCCGTCATGAAAATGAGGGTGGCAGGGAGTGCCTaGCTTGCACTGTTAAGAAGG +
Preference number: 4 (lower is better)
Translates to: DEAWTGESKNCVSVMKMRVAGSA*LALLRR
Trigger: CCTTCTTAACAGTGCAAGGCAGGCACTCCCTGCCAC...CCTCATTTTCATGACGGACACACAATTTTTGCTCTCTCCTGTCCAAGCCTCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR GCA 90 bp GACACTGTTTCTACTGTAGGGGTAGGAAGAAGACAGATGGATGCCAGTACACTTACACAGGCGTGTGTCTaGATGGGCCCAATGTTTGCC +
Preference number: 4 (lower is better)
Translates to: DTVSTVGVGRRQMDASTLTQACV*MGPMFA
Trigger: GGCAAACATTGGGCCCATGCAGACACACGCCTGTGT...AAGTGTACTGGCATCCATCTGTCTTCTTCCTACCCCTACAGTAGAAACAGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR CCA 90 bp AGATCACTCACAGAACATGCATGGACATTTTTACAGGCTTTCAGGAGATTCTTTTCAGCTGGCAGCGGGTaGCGGCCTCAGTCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: RSLTEHAWTFLQAFRRFFSAGSG*RPQSSA
Trigger: TGCAGAGGACTGAGGCCGCCACCCGCTGCCAGCTGA...AAAGAATCTCCTGAAAGCCTGTAAAAATGTCCATGCATGTTCTGTGAGTGATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000510898.7
CDS-3UTR CCA 90 bp TGGAGAACAAAGAGGGGATGGTGGGCAGAGGCCTCGAAGAGCCAGAAAAGGGTCCTCACAGAACATGCATaGACATTTTTACAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: WRTKRGWWAEASKSQKRVLTEHA*TFLQAF
Trigger: GAAAGCCTGTAAAAATGTCCATGCATGTTCTGTGAG...GACCCTTTTCTGGCTCTTCGAGGCCTCTGCCCACCATCCCCTCTTTGTTCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000510898.7
3UTR CAA 72 bp CTGACGCCTGGGGTTCCCAGAAGTATCTGCAAATTGTaGGAGTTTCAGCAGGGAACAAGTGTTTTGGACGAG +
Preference number: 4 (lower is better)
Translates to: LTPGVPRSICKL*EFQQGTSVLDE
Trigger: CTCGTCCAAAACACTTGTTCCCTGCTGAAACTCCAACAATTTGCAGATACTTCTGGGAACCCCAGGCGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR TCA 90 bp ACTCACAGAACATGCATGGACATTTTTACAGGCTTTCAGGAGATTCTTTGTGTATTCGCTCGGTGGTGGTaGGCAGGAAGGCACCGGTGT +
Preference number: 4 (lower is better)
Translates to: THRTCMDIFTGFQEILCVFARWW*AGRHRC
Trigger: ACACCGGTGCCTTCCTGCTCACCACCACCGAGCGAA...TACACAAAGAATCTCCTGAAAGCCTGTAAAAATGTCCATGCATGTTCTGTGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000510898.7
CDS-3UTR TCA 90 bp GAGAATGGGGGTGAGAAAGTGGAAATGAAAGTAATCAACAACTCTTTTGAACAGTTCGCTCGGTGGTGGTaGGCAGGAAGGCACCGGTGT +
Preference number: 4 (lower is better)
Translates to: ENGGEKVEMKVINNSFEQFARWW*AGRHRC
Trigger: ACACCGGTGCCTTCCTGCTCACCACCACCGAGCGAA...CTGTTCAAAAGAGTTGTTGATTACTTTCATTTCCACTTTCTCACCCCCATTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000510898.7
CDS-3UTR TCA 90 bp TCTACTGTAGGGGTAGGAAGAAGACAGATGGATGCCAGTACACTTGCAGATACGAGAGCCGAGTGCTGCTaGGAAGTCAAAGTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: STVGVGRRQMDASTLADTRAECC*EVKVLV
Trigger: AACAAGGACTTTGACTTCTCAGCAGCACTCGGCTCT...CGTATCTGCAAGTGTACTGGCATCCATCTGTCTTCTTCCTACCCCTACAGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR GCA 90 bp GACACTGTTTCTACTGTAGGGGTAGGAAGAAGACAGATGGATGCCAGTACACTTATGAGGTTCAGGATGTaGCAAGGGTGTGTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: DTVSTVGVGRRQMDASTLMRFRM*QGCVQL
Trigger: CAGCTGCACACACCCTTGGCACATCCTGAACCTCAT...AAGTGTACTGGCATCCATCTGTCTTCTTCCTACCCCTACAGTAGAAACAGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR GCA 90 bp GCACTGTTAAGAAGGATGCAGGCAGTCTGCTTAAATGGATTTCTCTGGCTGTGGAGGGAGTGCCTGCCTTaGACTGTTAAGAAGGATGCA +
Preference number: 4 (lower is better)
Translates to: ALLRRMQAVCLNGFLWLWRECLP*TVKKDA
Trigger: TGCATCCTTCTTAACAGTGCAAGGCAGGCACTCCCT...CCACAGCCAGAGAAATCCATTTAAGCAGACTGCCTGCATCCTTCTTAACAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR GCA 90 bp TTCTACTGTAGGGGTAGGAAGAAGACAGATGGATGCCAGTACACTTGCAGATACTCTTGTGGCAGGGAGTaGCTGCCTTGCACTGTTAAG +
Preference number: 4 (lower is better)
Translates to: FYCRGRKKTDGCQYTCRYSCGRE*LPCTVK
Trigger: CTTAACAGTGCAAGGCAGGCACTCCCTGCCACAAGA...GTATCTGCAAGTGTACTGGCATCCATCTGTCTTCTTCCTACCCCTACAGTAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR GCA 90 bp GAGAATGGGGGTGAGAAAGTGGAAATGAAAGTAATCAACAACTCTTTTGAACAGGGCCTGCCTTGTTCCTaGAGGCCAGGGTGGACACAG +
Preference number: 4 (lower is better)
Translates to: ENGGEKVEMKVINNSFEQGLPCS*RPGWTQ
Trigger: CTGTGTCCACCCTGGCCTGCAGGAACAAGGCAGGCC...CTGTTCAAAAGAGTTGTTGATTACTTTCATTTCCACTTTCTCACCCCCATTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR CCA 90 bp GACACTGTTTCTACTGTAGGGGTAGGAAGAAGACAGATGGATGCCAGTACACTTGCCAGGAGGAGTAGATaGAGTTTTCCTCCATGGGGA +
Preference number: 4 (lower is better)
Translates to: DTVSTVGVGRRQMDASTLARRSR*SFPPWG
Trigger: TCCCCATGGAGGAAAACTCCATCTACTCCTCCTGGC...AAGTGTACTGGCATCCATCTGTCTTCTTCCTACCCCTACAGTAGAAACAGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp AGGTGGCCGAAGAGGAATGTGAGGTCAAGGGAAGGTTTAAAATGTGAAATTACAACAAAGAGGGGATGGTaGGCAGAGGCCTCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: RWPKRNVRSREGLKCEITTKRGW*AEASKS
Trigger: GCTCTTCGAGGCCTCTGCCCACCATCCCCTCTTTGT...TGTAATTTCACATTTTAAACCTTCCCTTGACCTCACATTCCTCTTCGGCCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp CAGAGCCGAGTGCTGCTGAGAAGTCAAAGTCCTTGTTGCTTTTGTTTTGGAGAAAGGGGGAAGGGACTATaGAGAACAAAGAGGGGATGG +
Preference number: 4 (lower is better)
Translates to: QSRVLLRSQSPCCFCFGERGKGL*RTKRGW
Trigger: CCATCCCCTCTTTGTTCTCCATAGTCCCTTCCCCCT...TTCTCCAAAACAAAAGCAACAAGGACTTTGACTTCTCAGCAGCACTCGGCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp GAGCAGGAGCAGAGGAGGGAACGCAGCATGGAAGTCTTCAGGAAACTTCTCTCCCTCACAGAACATGCATaGACATTTTTACAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: EQEQRRERSMEVFRKLLSLTEHA*TFLQAF
Trigger: GAAAGCCTGTAAAAATGTCCATGCATGTTCTGTGAG...GGAGAGAAGTTTCCTGAAGACTTCCATGCTGCGTTCCCTCCTCTGCTCCTGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR CCA 90 bp GGGGACAGACACTGTTTCTACTGTAGGGGTAGGAAGAAGACAGATGGATGCCAGCCGTGCAGAGCAACATaGAGTCCTAATGATTTCCAT +
Preference number: 4 (lower is better)
Translates to: GDRHCFYCRGRKKTDGCQPCRAT*SPNDFH
Trigger: ATGGAAATCATTAGGACTCCATGTTGCTCTGCACGG...CTGGCATCCATCTGTCTTCTTCCTACCCCTACAGTAGAAACAGTGTCTGTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510898.7
3UTR CAA 72 bp TTTACAGGCTTTCAGGAGATTCTTTGTGTAGCAGGGTaGAGCTACACTACATCTGAGCCTAGGACCCTGGGA +
Preference number: 4 (lower is better)
Translates to: FTGFQEILCVAG*SYTTSEPRTLG
Trigger: TCCCAGGGTCCTAGGCTCAGATGTAGTGTAGCTCAACCCTGCTACACAAAGAATCTCCTGAAAGCCTGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000510898.7
3UTR CAA 72 bp TGCAAATTGTTGGAGTTTCAGCAGGGAACAAGTGTTTaGGACGAGGGTGTCTCTGAAATCCCTTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: CKLLEFQQGTSV*DEGVSEIPSTC
Trigger: GCAGGTGGAAGGGATTTCAGAGACACCCTCGTCCAAAACACTTGTTCCCTGCTGAAACTCCAACAATTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR TCA 90 bp AACCAGAGCCGAGTGCTGCTGAGAAGTCAAAGTCCTTGTTGCTTTTGTTTTGGACAATTTTCCAAGCTCTaGGGTGAAAGGAGCCGGGAT +
Preference number: 4 (lower is better)
Translates to: NQSRVLLRSQSPCCFCFGQFSKL*GERSRD
Trigger: ATCCCGGCTCCTTTCACCTCAGAGCTTGGAAAATTG...TCCAAAACAAAAGCAACAAGGACTTTGACTTCTCAGCAGCACTCGGCTCTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR TCA 90 bp AGTGCCTGCCTTGCACTGTTAAGAAGGATGCAGGCAGTCTGCTTAAATGGATTTAGAGCCGAGTGCTGCTaGGAAGTCAAAGTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: SACLALLRRMQAVCLNGFRAECC*EVKVLV
Trigger: AACAAGGACTTTGACTTCTCAGCAGCACTCGGCTCT...AAATCCATTTAAGCAGACTGCCTGCATCCTTCTTAACAGTGCAAGGCAGGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR GCA 90 bp GACACTGTTTCTACTGTAGGGGTAGGAAGAAGACAGATGGATGCCAGTACACTTAGGGAGTGCCTGCCTTaGACTGTTAAGAAGGATGCA +
Preference number: 4 (lower is better)
Translates to: DTVSTVGVGRRQMDASTLRECLP*TVKKDA
Trigger: TGCATCCTTCTTAACAGTGCAAGGCAGGCACTCCCT...AAGTGTACTGGCATCCATCTGTCTTCTTCCTACCCCTACAGTAGAAACAGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp GCACTGTTAAGAAGGATGCAGGCAGTCTGCTTAAATGGATTTCTCTGGCTGTGGCCAGAGGATGAGGCTTaGACAGGAGAGAGCAAAAAT +
Preference number: 4 (lower is better)
Translates to: ALLRRMQAVCLNGFLWLWPEDEA*TGESKN
Trigger: ATTTTTGCTCTCTCCTGTCCAAGCCTCATCCTCTGG...CCACAGCCAGAGAAATCCATTTAAGCAGACTGCCTGCATCCTTCTTAACAGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp TCTACTGTAGGGGTAGGAAGAAGACAGATGGATGCCAGTACACTTGCAGATACGTTAAATGGATTTCTCTaGCTGTGGGCAGCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: STVGVGRRQMDASTLADTLNGFL*LWAAVC
Trigger: GCACACAGCTGCCCACAGCCAGAGAAATCCATTTAA...CGTATCTGCAAGTGTACTGGCATCCATCTGTCTTCTTCCTACCCCTACAGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp GAAGGGACTATGGAGAACAAAGAGGGGATGGTGGGCAGAGGCCTCGAAGAGCCATTGTTGCTTTTGTTTTaGAGAATAAGGTTGGTGACT +
Preference number: 4 (lower is better)
Translates to: EGTMENKEGMVGRGLEEPLLLLF*RIRLVT
Trigger: AGTCACCAACCTTATTCTCCAAAACAAAAGCAACAA...TGGCTCTTCGAGGCCTCTGCCCACCATCCCCTCTTTGTTCTCCATAGTCCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp TTTCAAGAACCAGAGCCGAGTGCTGCTGAGAAGTCAAAGTCCTTGTTGCTTTTGGGCAGCAGTAGAGGCTaGGAAGGAGATTGTTATGAG +
Preference number: 4 (lower is better)
Translates to: FQEPEPSAAEKSKSLLLLGSSRG*EGDCYE
Trigger: CTCATAACAATCTCCTTCCCAGCCTCTACTGCTGCC...CAAAAGCAACAAGGACTTTGACTTCTCAGCAGCACTCGGCTCTGGTTCTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000510898.7
CDS-3UTR CCA 90 bp ATGAAACGAGAGAGAACAGGGGGAAGGGACTATGGAGAACAAAGAGGGGATGGTAGGGAACAAGTGTTTTaGACGAGGGTGTCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: MKRERTGGRDYGEQRGDGREQVF*TRVSLK
Trigger: TTTCAGAGACACCCTCGTCCAAAACACTTGTTCCCT...ACCATCCCCTCTTTGTTCTCCATAGTCCCTTCCCCCTGTTCTCTCTCGTTTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR TCA 90 bp GGCTTTCAGGAGATTCTTTGTGTAGCAGGGTTGAGCTACACTACATCTGAGCCTATCAAGGATTATGCCTaGTACGTCATCGGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: GFQEILCVAGLSYTTSEPIKDYA*YVIGSL
Trigger: GAGAGAACCGATGACGTATCAGGCATAATCCTTGAT...AGGCTCAGATGTAGTGTAGCTCAACCCTGCTACACAAAGAATCTCCTGAAAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000510898.7
CDS-3UTR CCA 90 bp TTCTACTGTAGGGGTAGGAAGAAGACAGATGGATGCCAGTACACTTGCAGATACCCAGAGGATGAGGCTTaGACAGGAGAGAGCAAAAAT +
Preference number: 4 (lower is better)
Translates to: FYCRGRKKTDGCQYTCRYPEDEA*TGESKN
Trigger: ATTTTTGCTCTCTCCTGTCCAAGCCTCATCCTCTGG...GTATCTGCAAGTGTACTGGCATCCATCTGTCTTCTTCCTACCCCTACAGTAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CCA 90 bp ACTCACAGAACATGCATGGACATTTTTACAGGCTTTCAGGAGATTCTTTGTGTAGAACAGGGTCTCTTGTaGCAGGGAGTGCCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: THRTCMDIFTGFQEILCVEQGLL*QGVPAL
Trigger: CAAGGCAGGCACTCCCTGCCACAAGAGACCCTGTTC...TACACAAAGAATCTCCTGAAAGCCTGTAAAAATGTCCATGCATGTTCTGTGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000510898.7
CDS-3UTR CCA 90 bp GAGAATGGGGGTGAGAAAGTGGAAATGAAAGTAATCAACAACTCTTTTGAACAGGAGGAGACTGACGCCTaGGGTTCCCAGAAGTATCTG +
Preference number: 4 (lower is better)
Translates to: ENGGEKVEMKVINNSFEQEETDA*GSQKYL
Trigger: CAGATACTTCTGGGAACCCCAGGCGTCAGTCTCCTC...CTGTTCAAAAGAGTTGTTGATTACTTTCATTTCCACTTTCTCACCCCCATTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR TCA 90 bp AGGTGGCCGAAGAGGAATGTGAGGTCAAGGGAAGGTTTAAAATGTGAAATTACAAGGGGAGAATGGGGGTaGGAAAGTGGAAATGAAAGT +
Preference number: 4 (lower is better)
Translates to: RWPKRNVRSREGLKCEITRGEWG*ESGNES
Trigger: ACTTTCATTTCCACTTTCTCACCCCCATTCTCCCCT...TGTAATTTCACATTTTAAACCTTCCCTTGACCTCACATTCCTCTTCGGCCACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR GCA 90 bp TTCTACTGTAGGGGTAGGAAGAAGACAGATGGATGCCAGTACACTTGCAGATACTCTCATCAAGGATTATaGCTGATACGTCATCGGTTC +
Preference number: 4 (lower is better)
Translates to: FYCRGRKKTDGCQYTCRYSHQGL*LIRHRF
Trigger: GAACCGATGACGTATCAGGCATAATCCTTGATGAGA...GTATCTGCAAGTGTACTGGCATCCATCTGTCTTCTTCCTACCCCTACAGTAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR GCA 90 bp GAGAATGGGGGTGAGAAAGTGGAAATGAAAGTAATCAACAACTCTTTTGAACAGGTTGGGCCCTCATGTTaGTCCTTCCTGAGTCTGACA +
Preference number: 4 (lower is better)
Translates to: ENGGEKVEMKVINNSFEQVGPSC*SFLSLT
Trigger: TGTCAGACTCAGGAAGGAGCAACATGAGGGCCCAAC...CTGTTCAAAAGAGTTGTTGATTACTTTCATTTCCACTTTCTCACCCCCATTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR CCA 90 bp GAGAATGGGGGTGAGAAAGTGGAAATGAAAGTAATCAACAACTCTTTTGAACAGAGGGGGAAGGGACTATaGAGAACAAAGAGGGGATGG +
Preference number: 4 (lower is better)
Translates to: ENGGEKVEMKVINNSFEQRGKGL*RTKRGW
Trigger: CCATCCCCTCTTTGTTCTCCATAGTCCCTTCCCCCT...CTGTTCAAAAGAGTTGTTGATTACTTTCATTTCCACTTTCTCACCCCCATTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR GCA 90 bp GATGAGGCTTGGACAGGAGAGAGCAAAAATTGTGTGTCCGTCATGAAAATGAGGATCACTCACAGAACATaGATGGACATTTTTACAGGC +
Preference number: 4 (lower is better)
Translates to: DEAWTGESKNCVSVMKMRITHRT*MDIFTG
Trigger: GCCTGTAAAAATGTCCATGCATGTTCTGTGAGTGAT...CCTCATTTTCATGACGGACACACAATTTTTGCTCTCTCCTGTCCAAGCCTCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000510898.7
CDS-3UTR GCA 90 bp CAAGAACCAGAGCCGAGTGCTGCTGAGAAGTCAAAGTCCTTGTTGCTTTTGTTTATCACTCACAGAACATaGATGGACATTTTTACAGGC +
Preference number: 4 (lower is better)
Translates to: QEPEPSAAEKSKSLLLLFITHRT*MDIFTG
Trigger: GCCTGTAAAAATGTCCATGCATGTTCTGTGAGTGAT...AAACAAAAGCAACAAGGACTTTGACTTCTCAGCAGCACTCGGCTCTGGTTCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000510898.7
CDS-3UTR GCA 90 bp AGGTGGCCGAAGAGGAATGTGAGGTCAAGGGAAGGTTTAAAATGTGAAATTACATCTCATCAAGGATTATaGCTGATACGTCATCGGTTC +
Preference number: 4 (lower is better)
Translates to: RWPKRNVRSREGLKCEITSHQGL*LIRHRF
Trigger: GAACCGATGACGTATCAGGCATAATCCTTGATGAGA...TGTAATTTCACATTTTAAACCTTCCCTTGACCTCACATTCCTCTTCGGCCACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR GCA 90 bp AGATCACTCACAGAACATGCATGGACATTTTTACAGGCTTTCAGGAGATTCTTTATTACAGAGCATGTTTaGGTGTGGCTGGAAAAGCTG +
Preference number: 4 (lower is better)
Translates to: RSLTEHAWTFLQAFRRFFITEHV*VWLEKL
Trigger: CAGCTTTTCCAGCCACACGCAAACATGCTCTGTAAT...AAAGAATCTCCTGAAAGCCTGTAAAAATGTCCATGCATGTTCTGTGAGTGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000510898.7
CDS-3UTR CCA 90 bp CAGAGCCGAGTGCTGCTGAGAAGTCAAAGTCCTTGTTGCTTTTGTTTTGGAGAATTGTTGCTTTTGTTTTaGAGAATAAGGTTGGTGACT +
Preference number: 4 (lower is better)
Translates to: QSRVLLRSQSPCCFCFGELLLLF*RIRLVT
Trigger: AGTCACCAACCTTATTCTCCAAAACAAAAGCAACAA...TTCTCCAAAACAAAAGCAACAAGGACTTTGACTTCTCAGCAGCACTCGGCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
3UTR CAA 72 bp CCGAGTGCTGCTGAGAAGTCAAAGTCCTTGTTGCTTTaGTTTTGGAGAATAAGGTTGGTGACTCTAATAAAA +
Preference number: 4 (lower is better)
Translates to: PSAAEKSKSLLL*FWRIRLVTLIK
Trigger: TTTTATTAGAGTCACCAACCTTATTCTCCAAAACAAAAGCAACAAGGACTTTGACTTCTCAGCAGCACTCGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS GCA 90 bp GTCAGCCAGGCGGATGACCCGTCGCTCCCCTCGCCGGCCAGGCCCTaGCGACCTGTCACCCGCTGCTCCCAGGCCACCATCCCGGACCTC +
Preference number: 5 (lower is better)
Translates to: VSQADDPSLPSPARP*RPVTRCSQATIPDL
Trigger: GAGGTCCGGGATGGTGGCCTGGGAGCAGCGGGTGACAGGTCGGCAGGGCCTGGCCGGCGAGGGGAGCGACGGGTCATCCGCCTGGCTGAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312943.10
ENST00000357198.9
ENST00000500323.2
ENST00000501403.6
ENST00000502885.5
ENST00000506493.5
ENST00000510380.5
ENST00000510898.7
CDS TCA 90 bp TCTCGCCGTCAGCCGGCAGCACGGACACACAGTCAGCCAGGCGGATaGCCCGTCGCTCCCCTCGCCGGCCAGGCCCTGCCGACCTGTCAC +
Preference number: 5 (lower is better)
Translates to: SRRQPAARTHSQPGG*PVAPLAGQALPTCH
Trigger: GTGACAGGTCGGCAGGGCCTGGCCGGCGAGGGGAGCGACGGGTCATCCGCCTGGCTGACTGTGTGTCCGTGCTGCCGGCTGACGGCGAGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312943.10
ENST00000357198.9
ENST00000500323.2
ENST00000501403.6
ENST00000502885.5
ENST00000506493.5
ENST00000510380.5
ENST00000510898.7
CDS CCA 90 bp GTAGAGGGCCTGGGTGCCCTTGGCCTCCCTCAGCTGGATGGCGTCTaGGCCCAGCACCAGCAGGGCCGGCCCCTTCAGCTGGCAGCGGGT +
Preference number: 5 (lower is better)
Translates to: VEGLGALGLPQLDGV*AQHQQGRPLQLAAG
Trigger: ACCCGCTGCCAGCTGAAGGGGCCGGCCCTGCTGGTGCTGGGCCCAGACGCCATCCAGCTGAGGGAGGCCAAGGGCACCCAGGCCCTCTAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312943.10
ENST00000357198.9
ENST00000377112.8
ENST00000500323.2
ENST00000501403.6
ENST00000510380.5
ENST00000510898.7
CDS CCA 90 bp GCCAGCTGTAGAGGGCCTGGGTGCCCTTGGCCTCCCTCAGCTGGATaGCGTCTGGGCCCAGCACCAGCAGGGCCGGCCCCTTCAGCTGGC +
Preference number: 5 (lower is better)
Translates to: ASCRGPGCPWPPSAG*RLGPAPAGPAPSAG
Trigger: GCCAGCTGAAGGGGCCGGCCCTGCTGGTGCTGGGCCCAGACGCCATCCAGCTGAGGGAGGCCAAGGGCACCCAGGCCCTCTACAGCTGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312943.10
ENST00000357198.9
ENST00000377112.8
ENST00000500323.2
ENST00000501403.6
ENST00000510380.5
ENST00000510898.7
CDS CCA 90 bp CGTTGGCCGGGCCGGGCCAGCTCAAGTCCTGGCCGTTGTGGTAGATaGGACTGGTTGTGGGGCTGCGGCTGCCGGGGCCCTCGTGCGGCT +
Preference number: 5 (lower is better)
Translates to: RWPGRASSSPGRCGR*DWLWGCGCRGPRAA
Trigger: AGCCGCACGAGGGCCCCGGCAGCCGCAGCCCCACAACCAGTCCCATCTACCACAACGGCCAGGACTTGAGCTGGCCCGGCCCGGCCAACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS CCA 90 bp CTGGGCCCAGCACCAGCAGGGCCGGCCCCTTCAGCTGGCAGCGGGTaGCGGCCTCAGTCCTCTGCACCACCACGGGAAACTCGCCCACTT +
Preference number: 5 (lower is better)
Translates to: LGPAPAGPAPSAGSG*RPQSSAPPRETRPL
Trigger: AAGTGGGCGAGTTTCCCGTGGTGGTGCAGAGGACTGAGGCCGCCACCCGCTGCCAGCTGAAGGGGCCGGCCCTGCTGGTGCTGGGCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312943.10
ENST00000357198.9
ENST00000377112.8
ENST00000500323.2
ENST00000501403.6
ENST00000510380.5
ENST00000510898.7
CDS CCA 90 bp CCGGGCCGGGCCAGCTCAAGTCCTGGCCGTTGTGGTAGATGGGACTaGTTGTGGGGCTGCGGCTGCCGGGGCCCTCGTGCGGCTCAGGTT +
Preference number: 5 (lower is better)
Translates to: PGRASSSPGRCGRWD*LWGCGCRGPRAAQV
Trigger: AACCTGAGCCGCACGAGGGCCCCGGCAGCCGCAGCCCCACAACCAGTCCCATCTACCACAACGGCCAGGACTTGAGCTGGCCCGGCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS CCA 90 bp CGGGCCAGCTCAAGTCCTGGCCGTTGTGGTAGATGGGACTGGTTGTaGGGCTGCGGCTGCCGGGGCCCTCGTGCGGCTCAGGTTCCCCAC +
Preference number: 5 (lower is better)
Translates to: RASSSPGRCGRWDWL*GCGCRGPRAAQVPH
Trigger: GTGGGGAACCTGAGCCGCACGAGGGCCCCGGCAGCCGCAGCCCCACAACCAGTCCCATCTACCACAACGGCCAGGACTTGAGCTGGCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CAA 90 bp GGCTGTGGGCAGCTGTGTGCAGGCACTGAGGAGGTCTGGGCTCGCCCAAGGCCGGGTAGATGGGACTGGTaGTGGGGCTGCGGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: GCGQLCAGTEEVWARPRPGRWDW*WGCGCR
Trigger: CCGGCAGCCGCAGCCCCACAACCAGTCCCATCTACC...CGGCCTTGGGCGAGCCCAGACCTCCTCAGTGCCTGCACACAGCTGCCCACAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS CCA 90 bp TGCGCAGGAAGTGGTAGGGCCAGCTGTAGAGGGCCTGGGTGCCCTTaGCCTCCCTCAGCTGGATGGCGTCTGGGCCCAGCACCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: CAGSGRASCRGPGCP*PPSAGWRLGPAPAG
Trigger: CCCTGCTGGTGCTGGGCCCAGACGCCATCCAGCTGAGGGAGGCCAAGGGCACCCAGGCCCTCTACAGCTGGCCCTACCACTTCCTGCGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312943.10
ENST00000357198.9
ENST00000377112.8
ENST00000500323.2
ENST00000501403.6
ENST00000510380.5
ENST00000510898.7
CDS CCA 90 bp GACGCCAGATCGTTGGGCTCCGGGCCTAGCAGTAGCGGCAGGCTCTaGGGTCCGGGCTCGGCCAGGTGCATTTTCCTGGACGTGGGTGGC +
Preference number: 5 (lower is better)
Translates to: DARSLGSGPSSSGRL*GPGSARCIFLDVGG
Trigger: GCCACCCACGTCCAGGAAAATGCACCTGGCCGAGCCCGGACCCCAGAGCCTGCCGCTACTGCTAGGCCCGGAGCCCAACGATCTGGCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS CCA 90 bp CCAGCTCCAGCAGCCGCCGGTACTGGGCCTCCAGGGTACTGTCGTTaGCCGGGCCGGGCCAGCTCAAGTCCTGGCCGTTGTGGTAGATGG +
Preference number: 5 (lower is better)
Translates to: PAPAAAGTGPPGYCR*PGRASSSPGRCGRW
Trigger: CCATCTACCACAACGGCCAGGACTTGAGCTGGCCCGGCCCGGCCAACGACAGTACCCTGGAGGCCCAGTACCGGCGGCTGCTGGAGCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CAA 90 bp GCTGTGGGCAGCTGTGTGCAGGCACTGAGGAGGTCTGGGCTCGCCCAAGGCCGGGGGACCAGGCCCCTCTaGGGAGACTGGGCATCTGTG +
Preference number: 5 (lower is better)
Translates to: AVGSCVQALRRSGLAQGRGTRPL*GDWASV
Trigger: CACAGATGCCCAGTCTCCCAAGAGGGGCCTGGTCCC...CCGGCCTTGGGCGAGCCCAGACCTCCTCAGTGCCTGCACACAGCTGCCCACAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CAA 90 bp AGGGCTGAGGTCCTCCACAGGCGGCCTGCCTTGTTCCTGCAGGCCAGGGTGGACCCGGACGCCAGATCGTaGGGCTCCGGGCCTAGCAGT +
Preference number: 5 (lower is better)
Translates to: RAEVLHRRPALFLQARVDPDARS*GSGPSS
Trigger: ACTGCTAGGCCCGGAGCCCAACGATCTGGCGTCCGG...GTCCACCCTGGCCTGCAGGAACAAGGCAGGCCGCCTGTGGAGGACCTCAGCCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS GCA 90 bp GGGCCTAGCAGTAGCGGCAGGCTCTGGGGTCCGGGCTCGGCCAGGTaGATTTTCCTGGACGTGGGTGGCTCAGGTCCTGGTGGCATCTCC +
Preference number: 5 (lower is better)
Translates to: GPSSSGRLWGPGSAR*IFLDVGGSGPGGIS
Trigger: GGAGATGCCACCAGGACCTGAGCCACCCACGTCCAGGAAAATGCACCTGGCCGAGCCCGGACCCCAGAGCCTGCCGCTACTGCTAGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS CCA 90 bp GGGCTCGGCCAGGTGCATTTTCCTGGACGTGGGTGGCTCAGGTCCTaGTGGCATCTCCCGAAGCTCTCCGGGGGTGTCCAGGGAGGGCAG +
Preference number: 5 (lower is better)
Translates to: GLGQVHFPGRGWLRS*WHLPKLSGGVQGGQ
Trigger: CTGCCCTCCCTGGACACCCCCGGAGAGCTTCGGGAGATGCCACCAGGACCTGAGCCACCCACGTCCAGGAAAATGCACCTGGCCGAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS CCA 90 bp TGGCACGCTTGCACACTGAAGCGTAGAGCCCGGACGCCAGATCGTTaGGCTCCGGGCCTAGCAGTAGCGGCAGGCTCTGGGGTCCGGGCT +
Preference number: 5 (lower is better)
Translates to: WHACTLKRRARTPDR*APGLAVAAGSGVRA
Trigger: AGCCCGGACCCCAGAGCCTGCCGCTACTGCTAGGCCCGGAGCCCAACGATCTGGCGTCCGGGCTCTACGCTTCAGTGTGCAAGCGTGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS CCA 90 bp GGCTGCCGGGGCCCTCGTGCGGCTCAGGTTCCCCACCGTGCAGCGTaGGGCTGGCCTCCAGCACACACAGGTTCTCATAGAGGTGCTCAT +
Preference number: 5 (lower is better)
Translates to: GCRGPRAAQVPHRAA*GWPPAHTGSHRGAH
Trigger: ATGAGCACCTCTATGAGAACCTGTGTGTGCTGGAGGCCAGCCCCACGCTGCACGGTGGGGAACCTGAGCCGCACGAGGGCCCCGGCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS CCA 90 bp TCTGGCCACCACTCTGCTGGGCGTTCAGGGCCGGTCACAAGGGGCTaGGCCCTTCCTCCGCTCACGACTCAGCAGGGTCACCAGCTTGGC +
Preference number: 5 (lower is better)
Translates to: SGHHSAGRSGPVTRG*ALPPLTTQQGHQLG
Trigger: GCCAAGCTGGTGACCCTGCTGAGTCGTGAGCGGAGGAAGGGCCCAGCCCCTTGTGACCGGCCCTGAACGCCCAGCAGAGTGGTGGCCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CAA 90 bp GCCAGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCTCCAGGGTACTGTCGTaGGCCGGGCCGGGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: ARVDTGVCLHGPNVCPPASRVLS*AGPGQL
Trigger: GAGCTGGCCCGGCCCGGCCAACGACAGTACCCTGGA...GGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CAA 90 bp GGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCCTCCAGGGTACTGTCGTaGGCCGGGCCGGGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: GGHRRVSAWAQCLPTSPPSRVLS*AGPGQL
Trigger: GAGCTGGCCCGGCCCGGCCAACGACAGTACCCTGGA...GGGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS TCA 90 bp GGGAAGGCCAGCTGGCAGATGGGGCCCATCCAGGCCTGGCGGTGCTaGGCAGCCAGTAGATGGCTTCGCTCGGTGGTGGTGAGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: GKASWQMGPIQAWRC*AASRWLRSVVVSRK
Trigger: CTTCCTGCTCACCACCACCGAGCGAAGCCATCTACTGGCTGCTCAGCACCGCCAGGCCTGGATGGGCCCCATCTGCCAGCTGGCCTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312943.10
ENST00000357198.9
ENST00000500323.2
ENST00000501403.6
ENST00000502885.5
ENST00000506493.5
ENST00000510380.5
ENST00000510898.7
CDS TCA 90 bp TCCTTGCTCCCAGGACAGTGCCGCTGCAGGGAGGGGCTCCACCCTTaGGGCCTCCTCCAGCTCAGCCCCTCACCCTATTTAGGGCCCTCG +
Preference number: 5 (lower is better)
Translates to: SLLPGQCRCREGLHP*GLLQLSPSPYLGPS
Trigger: CGAGGGCCCTAAATAGGGTGAGGGGCTGAGCTGGAGGAGGCCTCAAGGGTGGAGCCCCTCCCTGCAGCGGCACTGTCCTGGGAGCAAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502380.1
CDS CCA 90 bp GTAGCGGCAGGCTCTGGGGTCCGGGCTCGGCCAGGTGCATTTTCCTaGACGTGGGTGGCTCAGGTCCTGGTGGCATCTCCCGAAGCTCTC +
Preference number: 5 (lower is better)
Translates to: VAAGSGVRARPGAFS*TWVAQVLVASPEAL
Trigger: GAGAGCTTCGGGAGATGCCACCAGGACCTGAGCCACCCACGTCCAGGAAAATGCACCTGGCCGAGCCCGGACCCCAGAGCCTGCCGCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CAA 90 bp GGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCCGGTAGATGGGACTGGTaGTGGGGCTGCGGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: GGHRRVSAWAQCLPTSPPGRWDW*WGCGCR
Trigger: CCGGCAGCCGCAGCCCCACAACCAGTCCCATCTACC...GGGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CAA 90 bp GCCAGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCGGTAGATGGGACTGGTaGTGGGGCTGCGGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: ARVDTGVCLHGPNVCPPAGRWDW*WGCGCR
Trigger: CCGGCAGCCGCAGCCCCACAACCAGTCCCATCTACC...GGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CAA 90 bp GGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCCCACAGGCGGCCTGCCTaGTTCCTGCAGGCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: GGHRRVSAWAQCLPTSPPHRRPA*FLQARV
Trigger: CACCCTGGCCTGCAGGAACAAGGCAGGCCGCCTGTG...GGGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CAA 90 bp GGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCCACAGGCGGCCTGCCTaGTTCCTGCAGGCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: GWTQACVCMGPMFAHQPTHRRPA*FLQARV
Trigger: CACCCTGGCCTGCAGGAACAAGGCAGGCCGCCTGTG...GGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS TCA 90 bp GGCCCTTCCTCCGCTCACGACTCAGCAGGGTCACCAGCTTGGCCTTaGAACCTGCCTGAGGGTCAGGGCGGCCTGTGCCCTCCACCTGAT +
Preference number: 5 (lower is better)
Translates to: GPSSAHDSAGSPAWP*NLPEGQGGLCPPPD
Trigger: ATCAGGTGGAGGGCACAGGCCGCCCTGACCCTCAGGCAGGTTTCAAGGCCAAGCTGGTGACCCTGCTGAGTCGTGAGCGGAGGAAGGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS TCA 90 bp GAGGCAGGGTCTGGCAGAGCCTGCTCAGCCCCTGCCGTCTCAGGCTaGCACCCGCACTCCATTCCACTCCCCATACCTGGGTGGGATCCT +
Preference number: 5 (lower is better)
Translates to: EAGSGRACSAPAVSG*HPHSIPLPIPGWDP
Trigger: AGGATCCCACCCAGGTATGGGGAGTGGAATGGAGTGCGGGTGTCAGCCTGAGACGGCAGGGGCTGAGCAGGCTCTGCCAGACCCTGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502380.1
ENST00000512660.1
CDS GCA 90 bp CCTCCGCTCACGACTCAGCAGGGTCACCAGCTTGGCCTTGAAACCTaGCTGAGGGTCAGGGCGGCCTGTGCCCTCCACCTGATCCAGCTC +
Preference number: 5 (lower is better)
Translates to: PPLTTQQGHQLGLET*LRVRAACALHLIQL
Trigger: GAGCTGGATCAGGTGGAGGGCACAGGCCGCCCTGACCCTCAGGCAGGTTTCAAGGCCAAGCTGGTGACCCTGCTGAGTCGTGAGCGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS GCA 90 bp ACCCTTGGGTGGCAGATTGTCCGTGCCACTTGGCTCAGCACAAGCTaGTCGGCAAACGCTCCCAGCCAGGAGCGGGCCTCTGCTCCCCAG +
Preference number: 5 (lower is better)
Translates to: TLGWQIVRATWLSTS*SANAPSQERASAPQ
Trigger: CTGGGGAGCAGAGGCCCGCTCCTGGCTGGGAGCGTTTGCCGAGCAGCTTGTGCTGAGCCAAGTGGCACGGACAATCTGCCACCCAAGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500323.2
CDS CCA 90 bp CTCGGCCAGGTGCATTTTCCTGGACGTGGGTGGCTCAGGTCCTGGTaGCATCTCCCGAAGCTCTCCGGGGGTGTCCAGGGAGGGCAGAGA +
Preference number: 5 (lower is better)
Translates to: LGQVHFPGRGWLRSW*HLPKLSGGVQGGQR
Trigger: TCTCTGCCCTCCCTGGACACCCCCGGAGAGCTTCGGGAGATGCCACCAGGACCTGAGCCACCCACGTCCAGGAAAATGCACCTGGCCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS CCA 90 bp CCCTCTCCCACTCCTGTATTTCCCATCTCTCCCGGAGGCAGGGTCTaGCAGAGCCTGCTCAGCCCCTGCCGTCTCAGGCTGACACCCGCA +
Preference number: 5 (lower is better)
Translates to: PSPTPVFPISPGGRV*QSLLSPCRLRLTPA
Trigger: TGCGGGTGTCAGCCTGAGACGGCAGGGGCTGAGCAGGCTCTGCCAGACCCTGCCTCCGGGAGAGATGGGAAATACAGGAGTGGGAGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502380.1
ENST00000512660.1
CDS-3UTR CAA 90 bp GCCAGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCGGGACCAGGCCCCTCTaGGGAGACTGGGCATCTGTG +
Preference number: 5 (lower is better)
Translates to: ARVDTGVCLHGPNVCPPAGTRPL*GDWASV
Trigger: CACAGATGCCCAGTCTCCCAAGAGGGGCCTGGTCCC...GGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CAA 90 bp AGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCCGGACGCCAGATCGTaGGGCTCCGGGCCTAGCAGT +
Preference number: 5 (lower is better)
Translates to: RVDTGVCLHGPNVCPPAHPDARS*GSGPSS
Trigger: ACTGCTAGGCCCGGAGCCCAACGATCTGGCGTCCGG...GTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS GCA 90 bp GGAGGGGAGCGGGAGGGTGAAGACCCTTGGGTGGCAGATTGTCCGTaGCACTTGGCTCAGCACAAGCTGCTCGGCAAACGCTCCCAGCCA +
Preference number: 5 (lower is better)
Translates to: GGEREGEDPWVADCP*HLAQHKLLGKRSQP
Trigger: TGGCTGGGAGCGTTTGCCGAGCAGCTTGTGCTGAGCCAAGTGGCACGGACAATCTGCCACCCAAGGGTCTTCACCCTCCCGCTCCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500323.2
CDS CCA 90 bp AGCGGGAGGGTGAAGACCCTTGGGTGGCAGATTGTCCGTGCCACTTaGCTCAGCACAAGCTGCTCGGCAAACGCTCCCAGCCAGGAGCGG +
Preference number: 5 (lower is better)
Translates to: SGRVKTLGWQIVRAT*LSTSCSANAPSQER
Trigger: CCGCTCCTGGCTGGGAGCGTTTGCCGAGCAGCTTGTGCTGAGCCAAGTGGCACGGACAATCTGCCACCCAAGGGTCTTCACCCTCCCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500323.2
CDS CCA 90 bp CCAGCACTTCTGCGGGAGGGGAGCGGGAGGGTGAAGACCCTTGGGTaGCAGATTGTCCGTGCCACTTGGCTCAGCACAAGCTGCTCGGCA +
Preference number: 5 (lower is better)
Translates to: PALLREGSGRVKTLG*QIVRATWLSTSCSA
Trigger: TGCCGAGCAGCTTGTGCTGAGCCAAGTGGCACGGACAATCTGCCACCCAAGGGTCTTCACCCTCCCGCTCCCCTCCCGCAGAAGTGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500323.2
CDS CCA 90 bp TCCGCCAGCACTTCTGCGGGAGGGGAGCGGGAGGGTGAAGACCCTTaGGTGGCAGATTGTCCGTGCCACTTGGCTCAGCACAAGCTGCTC +
Preference number: 5 (lower is better)
Translates to: SASTSAGGEREGEDP*VADCPCHLAQHKLL
Trigger: GAGCAGCTTGTGCTGAGCCAAGTGGCACGGACAATCTGCCACCCAAGGGTCTTCACCCTCCCGCTCCCCTCCCGCAGAAGTGCTGGCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500323.2
CDS-3UTR CAA 90 bp AGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACTCCTGGAGGCCTCCCTaGACCACTCCACGCTGTCCG +
Preference number: 5 (lower is better)
Translates to: RVDTGVCLHGPNVCPPAHSWRPP*TTPRCP
Trigger: CGGACAGCGTGGAGTGGTCAAGGGAGGCCTCCAGGA...GTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501403.6
CDS-3UTR CAA 90 bp AGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACGGGACCAGGCCCCTCTaGGGAGACTGGGCATCTGTG +
Preference number: 5 (lower is better)
Translates to: RVDTGVCLHGPNVCPPAHGTRPL*GDWASV
Trigger: CACAGATGCCCAGTCTCCCAAGAGGGGCCTGGTCCC...GTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CAA 90 bp GCTGGAAAAGCTGCTGGTAGGATGAATGGGCGCAGGAGAGAGTGGGGACAGCTCTCCAGGGTACTGTCGTaGGCCGGGCCGGGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: AGKAAGRMNGRRREWGQLSRVLS*AGPGQL
Trigger: GAGCTGGCCCGGCCCGGCCAACGACAGTACCCTGGA...GAGCTGTCCCCACTCTCTCCTGCGCCCATTCATCCTACCAGCAGCTTTTCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS GCA 90 bp GGTTCTCATAGAGGTGCTCATTGCCTGGGGGCCCACTGGCACGCTTaGACACTGAAGCGTAGAGCCCGGACGCCAGATCGTTGGGCTCCG +
Preference number: 5 (lower is better)
Translates to: GSHRGAHCLGAHWHA*TLKRRARTPDRWAP
Trigger: CGGAGCCCAACGATCTGGCGTCCGGGCTCTACGCTTCAGTGTGCAAGCGTGCCAGTGGGCCCCCAGGCAATGAGCACCTCTATGAGAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CAA 90 bp GGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCAAGGAGAACACGCCCTaGTCGGAGCCGAACTTGCGC +
Preference number: 5 (lower is better)
Translates to: GWTQACVCMGPMFAHQPTKENTP*SEPNLR
Trigger: GCGCAAGTTCGGCTCCGACAAGGGCGTGTTCTCCTT...GGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS GCA 90 bp TGGGGCTGGCCTCCAGCACACACAGGTTCTCATAGAGGTGCTCATTaGCTGGGGGCCCACTGGCACGCTTGCACACTGAAGCGTAGAGCC +
Preference number: 5 (lower is better)
Translates to: WGWPPAHTGSHRGAH*LGAHWHACTLKRRA
Trigger: GGCTCTACGCTTCAGTGTGCAAGCGTGCCAGTGGGCCCCCAGGCAATGAGCACCTCTATGAGAACCTGTGTGTGCTGGAGGCCAGCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CAA 90 bp AGAAAAGCTGCCCTACTAGGGAACAGGGTCTCTTGTGGCAGGGAGTGCCTGCCTTGCTGCCTGGGGCGGTaGGCCACCTCTTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: RKAALLGNRVSCGRECLPCCLGR*ATSSSW
Trigger: CCAGGAGGAAGAGGTGGCCAACCGCCCCAGGCAGCA...AGGCAGGCACTCCCTGCCACAAGAGACCCTGTTCCCTAGTAGGGCAGCTTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000377112.8
CDS-3UTR CAA 90 bp AGGGCTGAGGTCCTCCACAGGCGGCCTGCCTTGTTCCTGCAGGCCAGGGTGGACTTCCGCCAGCACTTCTaGCCAAACTTGACATGCTGC +
Preference number: 5 (lower is better)
Translates to: RAEVLHRRPALFLQARVDFRQHF*PNLTCC
Trigger: GCAGCATGTCAAGTTTGGCAAGAAGTGCTGGCGGAA...GTCCACCCTGGCCTGCAGGAACAAGGCAGGCCGCCTGTGGAGGACCTCAGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS CCA 90 bp GCACACACAGGTTCTCATAGAGGTGCTCATTGCCTGGGGGCCCACTaGCACGCTTGCACACTGAAGCGTAGAGCCCGGACGCCAGATCGT +
Preference number: 5 (lower is better)
Translates to: AHTGSHRGAHCLGAH*HACTLKRRARTPDR
Trigger: ACGATCTGGCGTCCGGGCTCTACGCTTCAGTGTGCAAGCGTGCCAGTGGGCCCCCAGGCAATGAGCACCTCTATGAGAACCTGTGTGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CAA 90 bp GGAAGGAGGTGGCGGCCAGAGGATGAGGCTTGGACAGGAGAGAGCAAAAATTGTCACAGGCGGCCTGCCTaGTTCCTGCAGGCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: GRRWRPEDEAWTGESKNCHRRPA*FLQARV
Trigger: CACCCTGGCCTGCAGGAACAAGGCAGGCCGCCTGTG...ACAATTTTTGCTCTCTCCTGTCCAAGCCTCATCCTCTGGCCGCCACCTCCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR CAA 90 bp AGGGCTGAGGTCCTCCACAGGCGGCCTGCCTTGTTCCTGCAGGCCAGGGTGGACCAGGGAACAAGTGTTTaGGACGAGGGTGTCTCTGAA +
Preference number: 5 (lower is better)
Translates to: RAEVLHRRPALFLQARVDQGTSV*DEGVSE
Trigger: TTCAGAGACACCCTCGTCCAAAACACTTGTTCCCTG...GTCCACCCTGGCCTGCAGGAACAAGGCAGGCCGCCTGTGGAGGACCTCAGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS CCA 90 bp ACTCGCCCACTTCCTGCCAGGAGGAGTAGATGGAGTTTTCCTCCATaGGGACCAGGCCCCTCTTGGGAGACTGGGCATCTGTGGATCCTG +
Preference number: 5 (lower is better)
Translates to: TRPLPARRSRWSFPP*GPGPSWETGHLWIL
Trigger: CAGGATCCACAGATGCCCAGTCTCCCAAGAGGGGCCTGGTCCCCATGGAGGAAAACTCCATCTACTCCTCCTGGCAGGAAGTGGGCGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312943.10
ENST00000357198.9
ENST00000377112.8
ENST00000500323.2
ENST00000501403.6
ENST00000510380.5
ENST00000510898.7
CDS-3UTR CAA 90 bp GCCAGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCTTCCGCCAGCACTTCTaGCCAAACTTGACATGCTGC +
Preference number: 5 (lower is better)
Translates to: ARVDTGVCLHGPNVCPPAFRQHF*PNLTCC
Trigger: GCAGCATGTCAAGTTTGGCAAGAAGTGCTGGCGGAA...GGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CAA 90 bp GGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACCTTCCGCCAGCACTTCTaGCCAAACTTGACATGCTGC +
Preference number: 5 (lower is better)
Translates to: GWTQACVCMGPMFAHQPTFRQHF*PNLTCC
Trigger: GCAGCATGTCAAGTTTGGCAAGAAGTGCTGGCGGAA...GGTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS-3UTR CAA 90 bp TCTTGTGGCAGGGAGTGCCTGCCTTGCACTGTTAAGAAGGATGCAGGCAGTCTGGGGACCAGGCCCCTCTaGGGAGACTGGGCATCTGTG +
Preference number: 5 (lower is better)
Translates to: SCGRECLPCTVKKDAGSLGTRPL*GDWASV
Trigger: CACAGATGCCCAGTCTCCCAAGAGGGGCCTGGTCCC...CAGACTGCCTGCATCCTTCTTAACAGTGCAAGGCAGGCACTCCCTGCCACAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CAA 90 bp CAGGCAGTCTGCTTAAATGGATTTCTCTGGCTGTGGGCAGCTGTGTGCAGGCACGGGACCAGGCCCCTCTaGGGAGACTGGGCATCTGTG +
Preference number: 5 (lower is better)
Translates to: QAVCLNGFLWLWAAVCRHGTRPL*GDWASV
Trigger: CACAGATGCCCAGTCTCCCAAGAGGGGCCTGGTCCC...GTGCCTGCACACAGCTGCCCACAGCCAGAGAAATCCATTTAAGCAGACTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CAA 90 bp CACTTGCAGATACGGTGGGAGAGCCCGACCTGTTTCCCCAATATGCCTGTGAGGTCTGCTGCAGTGGGTTaGAGCCCACGGGTGGCAGGT +
Preference number: 5 (lower is better)
Translates to: HLQIRWESPTCFPNMPVRSAAVG*SPRVAG
Trigger: ACCTGCCACCCGTGGGCTCAAACCCACTGCAGCAGA...CCTCACAGGCATATTGGGGAAACAGGTCGGGCTCTCCCACCGTATCTGCAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR CAA 90 bp ACTATGGAGAACAAAGAGGGGATGGTGGGCAGAGGCCTCGAAGAGCCAGAAAAGTCCTGGAGGCCTCCCTaGACCACTCCACGCTGTCCG +
Preference number: 5 (lower is better)
Translates to: TMENKEGMVGRGLEEPEKSWRPP*TTPRCP
Trigger: CGGACAGCGTGGAGTGGTCAAGGGAGGCCTCCAGGA...CTTTTCTGGCTCTTCGAGGCCTCTGCCCACCATCCCCTCTTTGTTCTCCATAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000377112.8
CDS-3UTR CAA 90 bp GGGGACAGACACTGTTTCTACTGTAGGGGTAGGAAGAAGACAGATGGATGCCAGTGCTGCCTGGGGCGGTaGGCCACCTCTTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: GDRHCFYCRGRKKTDGCQCCLGR*ATSSSW
Trigger: CCAGGAGGAAGAGGTGGCCAACCGCCCCAGGCAGCA...CTGGCATCCATCTGTCTTCTTCCTACCCCTACAGTAGAAACAGTGTCTGTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000377112.8
CDS-3UTR CAA 90 bp GAACAAAGAGGGGATGGTGGGCAGAGGCCTCGAAGAGCCAGAAAAGGGTCCCTGGCCTGTGAGGAGACATaGGGTGGGGATAGACAGGAG +
Preference number: 5 (lower is better)
Translates to: EQRGDGGQRPRRARKGSLACEET*GGDRQE
Trigger: CTCCTGTCTATCCCCACCCAATGTCTCCTCACAGGC...CAGGGACCCTTTTCTGGCTCTTCGAGGCCTCTGCCCACCATCCCCTCTTTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS TCA 90 bp CTCTCACCAGATGCTGAGATCCTGCCTCATCTGCTAGCGGTCTTGTaGCTGCCGTCCACGTTTCTGCGTGTGCGTCTTTCTCTCCCCTCG +
Preference number: 5 (lower is better)
Translates to: LSPDAEILPHLLAVL*LPSTFLRVRLSLPS
Trigger: CGAGGGGAGAGAAAGACGCACACGCAGAAACGTGGACGGCAGTCACAAGACCGCTAGCAGATGAGGCAGGATCTCAGCATCTGGTGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509310.1
ENST00000510389.1
CDS-3UTR CAA 90 bp AGAGGAACAGAGAAACAGAGGTGGCCGAAGAGGAATGTGAGGTCAAGGGAAGGTTCCTGGAGGCCTCCCTaGACCACTCCACGCTGTCCG +
Preference number: 5 (lower is better)
Translates to: RGTEKQRWPKRNVRSREGSWRPP*TTPRCP
Trigger: CGGACAGCGTGGAGTGGTCAAGGGAGGCCTCCAGGA...ACCTTCCCTTGACCTCACATTCCTCTTCGGCCACCTCTGTTTCTCTGTTCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000377112.8
CDS-3UTR CAA 90 bp ATGCAGGCAGTCTGCTTAAATGGATTTCTCTGGCTGTGGGCAGCTGTGTGCAGGCCTCCGGGTCTCCAGTaGGGCCCTCATGTTGCTCCT +
Preference number: 5 (lower is better)
Translates to: MQAVCLNGFLWLWAAVCRPPGLQ*GPHVAP
Trigger: AGGAGCAACATGAGGGCCCAACTGGAGACCCGGAGG...CCTGCACACAGCTGCCCACAGCCAGAGAAATCCATTTAAGCAGACTGCCTGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS GCA 90 bp CTTAGGGAGAGCTTGTGGCCTAAATGGCAGTTCTATGACATCTGCTaGCTCCTCAGTCAACGGAATGGAGGGCTCCCTCCAGGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: LRESLWPKWQFYDIC*LLSQRNGGLPPGGW
Trigger: CCAGCCACCTGGAGGGAGCCCTCCATTCCGTTGACTGAGGAGGCAGCAGATGTCATAGAACTGCCATTTAGGCCACAAGCTCTCCCTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509310.1
ENST00000510389.1
CDS GCA 90 bp AGGCTTAGGGAGAGCTTGTGGCCTAAATGGCAGTTCTATGACATCTaGTGCCTCCTCAGTCAACGGAATGGAGGGCTCCCTCCAGGTGGC +
Preference number: 5 (lower is better)
Translates to: RLRESLWPKWQFYDI*CLLSQRNGGLPPGG
Trigger: GCCACCTGGAGGGAGCCCTCCATTCCGTTGACTGAGGAGGCAGCAGATGTCATAGAACTGCCATTTAGGCCACAAGCTCTCCCTAAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509310.1
ENST00000510389.1
CDS-3UTR CAA 90 bp GGAAGGAGGTGGCGGCCAGAGGATGAGGCTTGGACAGGAGAGAGCAAAAATTGTGCCTGTGAGGAGACATaGGGTGGGGATAGACAGGAG +
Preference number: 5 (lower is better)
Translates to: GRRWRPEDEAWTGESKNCACEET*GGDRQE
Trigger: CTCCTGTCTATCCCCACCCAATGTCTCCTCACAGGC...ACAATTTTTGCTCTCTCCTGTCCAAGCCTCATCCTCTGGCCGCCACCTCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CAA 90 bp GCTGTGGGCAGCTGTGTGCAGGCACTGAGGAGGTCTGGGCTCGCCCAAGGCCGGAAGTCCTTGTTGCTTTaGTTTTGGAGAATAAGGTTG +
Preference number: 5 (lower is better)
Translates to: AVGSCVQALRRSGLAQGRKSLLL*FWRIRL
Trigger: CAACCTTATTCTCCAAAACAAAAGCAACAAGGACTT...CCGGCCTTGGGCGAGCCCAGACCTCCTCAGTGCCTGCACACAGCTGCCCACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS TCA 90 bp ATTTCATGGGTCAGAGGCTGTGAAGCTCTTCCCTGCTGGGAGGTTTaGGCCTTCGACCCTCTCCCACTCCTGTATTTCCCATCTCTCCCG +
Preference number: 5 (lower is better)
Translates to: ISWVRGCEALPCWEV*AFDPLPLLYFPSLP
Trigger: CGGGAGAGATGGGAAATACAGGAGTGGGAGAGGGTCGAAGGCTCAAACCTCCCAGCAGGGAAGAGCTTCACAGCCTCTGACCCATGAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502380.1
ENST00000512660.1
CDS-3UTR CAA 90 bp GGAGAGCCCGACCTGTTTCCCCAATATGCCTGTGAGGAGACATTGGGTGGGGATTTCCGCCAGCACTTCTaGCCAAACTTGACATGCTGC +
Preference number: 5 (lower is better)
Translates to: GEPDLFPQYACEETLGGDFRQHF*PNLTCC
Trigger: GCAGCATGTCAAGTTTGGCAAGAAGTGCTGGCGGAA...ATCCCCACCCAATGTCTCCTCACAGGCATATTGGGGAAACAGGTCGGGCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000510898.7
CDS-3UTR CAA 90 bp AGTGCCTGCCTTGCACTGTTAAGAAGGATGCAGGCAGTCTGCTTAAATGGATTTCCGGACGCCAGATCGTaGGGCTCCGGGCCTAGCAGT +
Preference number: 5 (lower is better)
Translates to: SACLALLRRMQAVCLNGFPDARS*GSGPSS
Trigger: ACTGCTAGGCCCGGAGCCCAACGATCTGGCGTCCGG...AAATCCATTTAAGCAGACTGCCTGCATCCTTCTTAACAGTGCAAGGCAGGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR CAA 90 bp GGGGACAGACACTGTTTCTACTGTAGGGGTAGGAAGAAGACAGATGGATGCCAGGCCTCCCCTGTCCCCTaGCCAAACTTGACATGCTGC +
Preference number: 5 (lower is better)
Translates to: GDRHCFYCRGRKKTDGCQASPVP*PNLTCC
Trigger: GCAGCATGTCAAGTTTGGCAAGGGGACAGGGGAGGC...CTGGCATCCATCTGTCTTCTTCCTACCCCTACAGTAGAAACAGTGTCTGTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000377112.8
CDS CCA 90 bp TGTCGTCTCTCAAAAGGCCATGAGAACTCGAGCTGGGACTGCTACTaGGTCATGTTTGTAAAGCATCCAGTGGCCGGGCAGACCACCAGA +
Preference number: 5 (lower is better)
Translates to: CRLSKGHENSSWDCY*VMFVKHPVAGQTTR
Trigger: TCTGGTGGTCTGCCCGGCCACTGGATGCTTTACAAACATGACCCAGTAGCAGTCCCAGCTCGAGTTCTCATGGCCTTTTGAGAGACGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500323.2
CDS-3UTR CAA 90 bp AAGCCTCACAGCTCCCTCCGCCTGCCTCTTCGTGTCACTCGGCCGTGCAGAGCACTTGTTGCTTTTGTTTaGGAGAATAAGGTTGGTGAC +
Preference number: 5 (lower is better)
Translates to: KPHSSLRLPLRVTRPCRALVAFV*ENKVGD
Trigger: GTCACCAACCTTATTCTCCAAAACAAAAGCAACAAG...TGCTCTGCACGGCCGAGTGACACGAAGAGGCAGGCGGAGGGAGCTGTGAGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR CAA 90 bp ATGAAACGAGAGAGAACAGGGGGAAGGGACTATGGAGAACAAAGAGGGGATGGTAAGGAGAACACGCCCTaGTCGGAGCCGAACTTGCGC +
Preference number: 5 (lower is better)
Translates to: MKRERTGGRDYGEQRGDGKENTP*SEPNLR
Trigger: GCGCAAGTTCGGCTCCGACAAGGGCGTGTTCTCCTT...ACCATCCCCTCTTTGTTCTCCATAGTCCCTTCCCCCTGTTCTCTCTCGTTTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS GCA 90 bp CATCAATGTCGTCTCTCAAAAGGCCATGAGAACTCGAGCTGGGACTaGTACTGGGTCATGTTTGTAAAGCATCCAGTGGCCGGGCAGACC +
Preference number: 5 (lower is better)
Translates to: HQCRLSKGHENSSWD*YWVMFVKHPVAGQT
Trigger: GGTCTGCCCGGCCACTGGATGCTTTACAAACATGACCCAGTAGCAGTCCCAGCTCGAGTTCTCATGGCCTTTTGAGAGACGACATTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500323.2
CDS-3UTR CAA 90 bp ATGAAACGAGAGAGAACAGGGGGAAGGGACTATGGAGAACAAAGAGGGGATGGTGCCTGTGAGGAGACATaGGGTGGGGATAGACAGGAG +
Preference number: 5 (lower is better)
Translates to: MKRERTGGRDYGEQRGDGACEET*GGDRQE
Trigger: CTCCTGTCTATCCCCACCCAATGTCTCCTCACAGGC...ACCATCCCCTCTTTGTTCTCCATAGTCCCTTCCCCCTGTTCTCTCTCGTTTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CAA 90 bp GAGCAGAGGAGGGAACGCAGCATGGAAGTCTTCAGGAAACTTCTCTCCCCCTGGCTTTGTGTAGCAGGGTaGAGCTACACTACATCTGAG +
Preference number: 5 (lower is better)
Translates to: EQRRERSMEVFRKLLSPWLCVAG*SYTTSE
Trigger: CTCAGATGTAGTGTAGCTCAACCCTGCTACACAAAG...CCAGGGGGAGAGAAGTTTCCTGAAGACTTCCATGCTGCGTTCCCTCCTCTGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR CAA 90 bp GGCTTTCAGGAGATTCTTTGTGTAGCAGGGTTGAGCTACACTACATCTGAGCCTCACAGGGTGCTTGTGTaGGCCGCAATGAACGTGGGC +
Preference number: 5 (lower is better)
Translates to: GFQEILCVAGLSYTTSEPHRVLV*AAMNVG
Trigger: GCCCACGTTCATTGCGGCCAACACAAGCACCCTGTG...AGGCTCAGATGTAGTGTAGCTCAACCCTGCTACACAAAGAATCTCCTGAAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR CAA 90 bp AGGGTGGACACAGGCGTGTGTCTGCATGGGCCCAATGTTTGCCCACCAGCCCACTTTTGGAGAATAAGGTaGGTGACTCTAATAAAAGCC +
Preference number: 5 (lower is better)
Translates to: RVDTGVCLHGPNVCPPAHFWRIR*VTLIKA
Trigger: GGCTTTTATTAGAGTCACCAACCTTATTCTCCAAAA...GTGGGCTGGTGGGCAAACATTGGGCCCATGCAGACACACGCCTGTGTCCACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR CAA 90 bp AGAAAAGCTGCCCTACTAGGGAACAGGGTCTCTTGTGGCAGGGAGTGCCTGCCTCTTTCAGGAGATTCTTaGTGTAGCAGGGTTGAGCTA +
Preference number: 5 (lower is better)
Translates to: RKAALLGNRVSCGRECLPLSGDS*CSRVEL
Trigger: TAGCTCAACCCTGCTACACAAAGAATCTCCTGAAAG...AGGCAGGCACTCCCTGCCACAAGAGACCCTGTTCCCTAGTAGGGCAGCTTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000510898.7
CDS-3UTR CAA 90 bp GCAGCATGGAAGTCTTCAGGAAACTTCTCTCCCCCTGGAATGTCGGCTCCCGGAAGAAGTATCTGCAAATaGTTGGAGTTTCAGCAGGGA +
Preference number: 5 (lower is better)
Translates to: AAWKSSGNFSPPGMSAPGRSICK*LEFQQG
Trigger: TCCCTGCTGAAACTCCAACAATTTGCAGATACTTCT...TCCGGGAGCCGACATTCCAGGGGGAGAGAAGTTTCCTGAAGACTTCCATGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR CAA 90 bp GGAAGGAGGTGGCGGCCAGAGGATGAGGCTTGGACAGGAGAGAGCAAAAATTGTAGGAGAGAGCAAAAATaGTGTGTCCGTCATGAAAAT +
Preference number: 5 (lower is better)
Translates to: GRRWRPEDEAWTGESKNCRREQK*CVRHEN
Trigger: ATTTTCATGACGGACACACAATTTTTGCTCTCTCCT...ACAATTTTTGCTCTCTCCTGTCCAAGCCTCATCCTCTGGCCGCCACCTCCTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CAA 90 bp GGGGACAGACACTGTTTCTACTGTAGGGGTAGGAAGAAGACAGATGGATGCCAGAATTACAGAGCATGTTaGCGTGTGGCTGGAAAAGCT +
Preference number: 5 (lower is better)
Translates to: GDRHCFYCRGRKKTDGCQNYRAC*RVAGKA
Trigger: AGCTTTTCCAGCCACACGCAAACATGCTCTGTAATT...CTGGCATCCATCTGTCTTCTTCCTACCCCTACAGTAGAAACAGTGTCTGTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CAA 90 bp GGTTCTGGGGAGGAGAAAAGCTGCCCTACTAGGGAACAGGGTCTCTTGTGGCAGTTTTGGAGAATAAGGTaGGTGACTCTAATAAAAGCC +
Preference number: 5 (lower is better)
Translates to: GSGEEKSCPTREQGLLWQFWRIR*VTLIKA
Trigger: GGCTTTTATTAGAGTCACCAACCTTATTCTCCAAAA...CTGCCACAAGAGACCCTGTTCCCTAGTAGGGCAGCTTTTCTCCTCCCCAGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CAA 90 bp TCTTGTGGCAGGGAGTGCCTGCCTTGCACTGTTAAGAAGGATGCAGGCAGTCTGGAGAAGTCAAAGTCCTaGTTGCTTTTGTTTTGGAGA +
Preference number: 5 (lower is better)
Translates to: SCGRECLPCTVKKDAGSLEKSKS*LLLFWR
Trigger: TCTCCAAAACAAAAGCAACAAGGACTTTGACTTCTC...CAGACTGCCTGCATCCTTCTTAACAGTGCAAGGCAGGCACTCCCTGCCACAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CAA 90 bp AGAGCACAGCTGGGGACAGACACTGTTTCTACTGTAGGGGTAGGAAGAAGACAGCTTTCAGGAGATTCTTaGTGTAGCAGGGTTGAGCTA +
Preference number: 5 (lower is better)
Translates to: RAQLGTDTVSTVGVGRRQLSGDS*CSRVEL
Trigger: TAGCTCAACCCTGCTACACAAAGAATCTCCTGAAAG...CTGTCTTCTTCCTACCCCTACAGTAGAAACAGTGTCTGTCCCCAGCTGTGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000510898.7
CDS-3UTR CAA 90 bp GGGATCAGAGCACAGCTGGGGACAGACACTGTTTCTACTGTAGGGGTAGGAAGAAGGAGAGAGCAAAAATaGTGTGTCCGTCATGAAAAT +
Preference number: 5 (lower is better)
Translates to: GIRAQLGTDTVSTVGVGRRREQK*CVRHEN
Trigger: ATTTTCATGACGGACACACAATTTTTGCTCTCTCCT...TCTTCCTACCCCTACAGTAGAAACAGTGTCTGTCCCCAGCTGTGCTCTGATCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CAA 90 bp CAGATACGGTGGGAGAGCCCGACCTGTTTCCCCAATATGCCTGTGAGGAGACATAAGTCCTTGTTGCTTTaGTTTTGGAGAATAAGGTTG +
Preference number: 5 (lower is better)
Translates to: QIRWESPTCFPNMPVRRHKSLLL*FWRIRL
Trigger: CAACCTTATTCTCCAAAACAAAAGCAACAAGGACTT...ATGTCTCCTCACAGGCATATTGGGGAAACAGGTCGGGCTCTCCCACCGTATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CAA 90 bp GCACTGTTAAGAAGGATGCAGGCAGTCTGCTTAAATGGATTTCTCTGGCTGTGGCTTTGTGTAGCAGGGTaGAGCTACACTACATCTGAG +
Preference number: 5 (lower is better)
Translates to: ALLRRMQAVCLNGFLWLWLCVAG*SYTTSE
Trigger: CTCAGATGTAGTGTAGCTCAACCCTGCTACACAAAG...CCACAGCCAGAGAAATCCATTTAAGCAGACTGCCTGCATCCTTCTTAACAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000510898.7
CDS-3UTR CAA 90 bp TCTACTGTAGGGGTAGGAAGAAGACAGATGGATGCCAGTACACTTGCAGATACGAATTACAGAGCATGTTaGCGTGTGGCTGGAAAAGCT +
Preference number: 5 (lower is better)
Translates to: STVGVGRRQMDASTLADTNYRAC*RVAGKA
Trigger: AGCTTTTCCAGCCACACGCAAACATGCTCTGTAATT...CGTATCTGCAAGTGTACTGGCATCCATCTGTCTTCTTCCTACCCCTACAGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CAA 90 bp TTCTTGGTAGATCACTCACAGAACATGCATGGACATTTTTACAGGCTTTCAGGAAGTTGGGCCCTCATGTaGCTCCTTCCTGAGTCTGAC +
Preference number: 5 (lower is better)
Translates to: FLVDHSQNMHGHFYRLSGSWALM*LLPESD
Trigger: GTCAGACTCAGGAAGGAGCAACATGAGGGCCCAACT...TCCTGAAAGCCTGTAAAAATGTCCATGCATGTTCTGTGAGTGATCTACCAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR CAA 90 bp AGAGCAACATGGAGTCCTAATGATTTCCATCCCGTCTGTCTGCTGCAGTGGGTTAGTATCTGCAAATTGTaGGAGTTTCAGCAGGGAACA +
Preference number: 5 (lower is better)
Translates to: RATWSPNDFHPVCLLQWVSICKL*EFQQGT
Trigger: TGTTCCCTGCTGAAACTCCAACAATTTGCAGATACT...AACCCACTGCAGCAGACAGACGGGATGGAAATCATTAGGACTCCATGTTGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510898.7
CDS-3UTR CAA 90 bp GATGAGGCTTGGACAGGAGAGAGCAAAAATTGTGTGTCCGTCATGAAAATGAGGAATTACAGAGCATGTTaGCGTGTGGCTGGAAAAGCT +
Preference number: 5 (lower is better)
Translates to: DEAWTGESKNCVSVMKMRNYRAC*RVAGKA
Trigger: AGCTTTTCCAGCCACACGCAAACATGCTCTGTAATT...CCTCATTTTCATGACGGACACACAATTTTTGCTCTCTCCTGTCCAAGCCTCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CAA 90 bp GCACTGTTAAGAAGGATGCAGGCAGTCTGCTTAAATGGATTTCTCTGGCTGTGGCTTGTTGCTTTTGTTTaGGAGAATAAGGTTGGTGAC +
Preference number: 5 (lower is better)
Translates to: ALLRRMQAVCLNGFLWLWLVAFV*ENKVGD
Trigger: GTCACCAACCTTATTCTCCAAAACAAAAGCAACAAG...CCACAGCCAGAGAAATCCATTTAAGCAGACTGCCTGCATCCTTCTTAACAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CAA 90 bp TCTACTGTAGGGGTAGGAAGAAGACAGATGGATGCCAGTACACTTGCAGATACGGAGAAGTCAAAGTCCTaGTTGCTTTTGTTTTGGAGA +
Preference number: 5 (lower is better)
Translates to: STVGVGRRQMDASTLADTEKSKS*LLLFWR
Trigger: TCTCCAAAACAAAAGCAACAAGGACTTTGACTTCTC...CGTATCTGCAAGTGTACTGGCATCCATCTGTCTTCTTCCTACCCCTACAGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CAA 90 bp GATGAGGCTTGGACAGGAGAGAGCAAAAATTGTGTGTCCGTCATGAAAATGAGGCTTGTTGCTTTTGTTTaGGAGAATAAGGTTGGTGAC +
Preference number: 5 (lower is better)
Translates to: DEAWTGESKNCVSVMKMRLVAFV*ENKVGD
Trigger: GTCACCAACCTTATTCTCCAAAACAAAAGCAACAAG...CCTCATTTTCATGACGGACACACAATTTTTGCTCTCTCCTGTCCAAGCCTCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CAA 90 bp TTCTACTGTAGGGGTAGGAAGAAGACAGATGGATGCCAGTACACTTGCAGATACAAGTCCTTGTTGCTTTaGTTTTGGAGAATAAGGTTG +
Preference number: 5 (lower is better)
Translates to: FYCRGRKKTDGCQYTCRYKSLLL*FWRIRL
Trigger: CAACCTTATTCTCCAAAACAAAAGCAACAAGGACTT...GTATCTGCAAGTGTACTGGCATCCATCTGTCTTCTTCCTACCCCTACAGTAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312943.10
ENST00000377112.8
ENST00000510898.7
CDS-3UTR CAA 90 bp AGATCACTCACAGAACATGCATGGACATTTTTACAGGCTTTCAGGAGATTCTTTGAGAAGTCAAAGTCCTaGTTGCTTTTGTTTTGGAGA +
Preference number: 5 (lower is better)
Translates to: RSLTEHAWTFLQAFRRFFEKSKS*LLLFWR
Trigger: TCTCCAAAACAAAAGCAACAAGGACTTTGACTTCTC...AAAGAATCTCCTGAAAGCCTGTAAAAATGTCCATGCATGTTCTGTGAGTGATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000510898.7
CDS-3UTR CAA 90 bp AGATCACTCACAGAACATGCATGGACATTTTTACAGGCTTTCAGGAGATTCTTTTTTTGGAGAATAAGGTaGGTGACTCTAATAAAAGCC +
Preference number: 5 (lower is better)
Translates to: RSLTEHAWTFLQAFRRFFFWRIR*VTLIKA
Trigger: GGCTTTTATTAGAGTCACCAACCTTATTCTCCAAAA...AAAGAATCTCCTGAAAGCCTGTAAAAATGTCCATGCATGTTCTGTGAGTGATCT
38% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000312943.10
ENST00000510898.7
CDS TCA 72 bp CAGCCGGCAGCACGGACACACAGTCAGCCAGGCGGATaGCCCGTCGCTCCCCTCGCCGGCCAGGCCCTGCCG +
Preference number: 6 (lower is better)
Translates to: QPAARTHSQPGG*PVAPLAGQALP
Trigger: CGGCAGGGCCTGGCCGGCGAGGGGAGCGACGGGTCATCCGCCTGGCTGACTGTGTGTCCGTGCTGCCGGCTG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312943.10
ENST00000357198.9
ENST00000500323.2
ENST00000501403.6
ENST00000502885.5
ENST00000506493.5
ENST00000510380.5
ENST00000510898.7
CDS CCA 72 bp AGGCCTCCCCTGTCCCCGGGAAGGCCAGCTGGCAGATaGGGCCCATCCAGGCCTGGCGGTGCTGAGCAGCCA +
Preference number: 6 (lower is better)
Translates to: RPPLSPGRPAGR*GPSRPGGAEQP
Trigger: TGGCTGCTCAGCACCGCCAGGCCTGGATGGGCCCCATCTGCCAGCTGGCCTTCCCGGGGACAGGGGAGGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312943.10
ENST00000357198.9
ENST00000500323.2
ENST00000501403.6
ENST00000502885.5
ENST00000506493.5
ENST00000510380.5
ENST00000510898.7
CDS CAA 90 bp GGCCGGGCCAGCTCAAGTCCTGGCCGTTGTGGTAGATGGGACTGGTaGTGGGGCTGCGGCTGCCGGGGCCCTCGTGCGGCTCAGGTTCCC +
Preference number: 6 (lower is better)
Translates to: GRASSSPGRCGRWDW*WGCGCRGPRAAQVP
Trigger: GGGAACCTGAGCCGCACGAGGGCCCCGGCAGCCGCAGCCCCACAACCAGTCCCATCTACCACAACGGCCAGGACTTGAGCTGGCCCGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS CCA 72 bp GCACCAGCAGGGCCGGCCCCTTCAGCTGGCAGCGGGTaGCGGCCTCAGTCCTCTGCACCACCACGGGAAACT +
Preference number: 6 (lower is better)
Translates to: APAGPAPSAGSG*RPQSSAPPRET
Trigger: AGTTTCCCGTGGTGGTGCAGAGGACTGAGGCCGCCACCCGCTGCCAGCTGAAGGGGCCGGCCCTGCTGGTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312943.10
ENST00000357198.9
ENST00000377112.8
ENST00000500323.2
ENST00000501403.6
ENST00000510380.5
ENST00000510898.7
CDS CCA 72 bp CCACCCTCCTGTCCCAGGGGGAGCACCTCTCCCCTCTaGCCACCACTCTGCTGGGCGTTCAGGGCCGGTCAC +
Preference number: 6 (lower is better)
Translates to: PPSCPRGSTSPL*PPLCWAFRAGH
Trigger: GTGACCGGCCCTGAACGCCCAGCAGAGTGGTGGCCAGAGGGGAGAGGTGCTCCCCCTGGGACAGGAGGGTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS GCA 72 bp CCCTTCAGCTGGCAGCGGGTGGCGGCCTCAGTCCTCTaGACCACCACGGGAAACTCGCCCACTTCCTGCCAG +
Preference number: 6 (lower is better)
Translates to: PFSWQRVAASVL*TTTGNSPTSCQ
Trigger: CTGGCAGGAAGTGGGCGAGTTTCCCGTGGTGGTGCAGAGGACTGAGGCCGCCACCCGCTGCCAGCTGAAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312943.10
ENST00000357198.9
ENST00000377112.8
ENST00000500323.2
ENST00000501403.6
ENST00000510380.5
ENST00000510898.7
CDS CCA 72 bp AGTGGTAGGGCCAGCTGTAGAGGGCCTGGGTGCCCTTaGCCTCCCTCAGCTGGATGGCGTCTGGGCCCAGCA +
Preference number: 6 (lower is better)
Translates to: SGRASCRGPGCP*PPSAGWRLGPA
Trigger: TGCTGGGCCCAGACGCCATCCAGCTGAGGGAGGCCAAGGGCACCCAGGCCCTCTACAGCTGGCCCTACCACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312943.10
ENST00000357198.9
ENST00000377112.8
ENST00000500323.2
ENST00000501403.6
ENST00000510380.5
ENST00000510898.7
CDS CCA 72 bp GGCTCTGGGGTCCGGGCTCGGCCAGGTGCATTTTCCTaGACGTGGGTGGCTCAGGTCCTGGTGGCATCTCCC +
Preference number: 6 (lower is better)
Translates to: GSGVRARPGAFS*TWVAQVLVASP
Trigger: GGGAGATGCCACCAGGACCTGAGCCACCCACGTCCAGGAAAATGCACCTGGCCGAGCCCGGACCCCAGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS CCA 72 bp TCAAGTCCTGGCCGTTGTGGTAGATGGGACTGGTTGTaGGGCTGCGGCTGCCGGGGCCCTCGTGCGGCTCAG +
Preference number: 6 (lower is better)
Translates to: SSPGRCGRWDWL*GCGCRGPRAAQ
Trigger: CTGAGCCGCACGAGGGCCCCGGCAGCCGCAGCCCCACAACCAGTCCCATCTACCACAACGGCCAGGACTTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS CCA 72 bp CACTCTGCTGGGCGTTCAGGGCCGGTCACAAGGGGCTaGGCCCTTCCTCCGCTCACGACTCAGCAGGGTCAC +
Preference number: 6 (lower is better)
Translates to: HSAGRSGPVTRG*ALPPLTTQQGH
Trigger: GTGACCCTGCTGAGTCGTGAGCGGAGGAAGGGCCCAGCCCCTTGTGACCGGCCCTGAACGCCCAGCAGAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS CAA 72 bp AGCTCAAGTCCTGGCCGTTGTGGTAGATGGGACTGGTaGTGGGGCTGCGGCTGCCGGGGCCCTCGTGCGGCT +
Preference number: 6 (lower is better)
Translates to: SSSPGRCGRWDW*WGCGCRGPRAA
Trigger: AGCCGCACGAGGGCCCCGGCAGCCGCAGCCCCACAACCAGTCCCATCTACCACAACGGCCAGGACTTGAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS CAA 72 bp CGAGGCAGGGGCAGAGGCTGCATTCTCCACCCACTGTaGGTCCTTGGCAGCTGCCTGGCAGCCAGGGGTCCC +
Preference number: 6 (lower is better)
Translates to: RGRGRGCILHPL*VLGSCLAARGP
Trigger: GGGACCCCTGGCTGCCAGGCAGCTGCCAAGGACCAACAGTGGGTGGAGAATGCAGCCTCTGCCCCTGCCTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502380.1
ENST00000512660.1
CDS CAA 90 bp CTCCTTGCTCCCAGGACAGTGCCGCTGCAGGGAGGGGCTCCACCCTaGAGGCCTCCTCCAGCTCAGCCCCTCACCCTATTTAGGGCCCTC +
Preference number: 6 (lower is better)
Translates to: LLAPRTVPLQGGAPP*RPPPAQPLTLFRAL
Trigger: GAGGGCCCTAAATAGGGTGAGGGGCTGAGCTGGAGGAGGCCTCAAGGGTGGAGCCCCTCCCTGCAGCGGCACTGTCCTGGGAGCAAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502380.1
CDS TCA 72 bp AGCTGGCAGATGGGGCCCATCCAGGCCTGGCGGTGCTaGGCAGCCAGTAGATGGCTTCGCTCGGTGGTGGTG +
Preference number: 6 (lower is better)
Translates to: SWQMGPIQAWRC*AASRWLRSVVV
Trigger: CACCACCACCGAGCGAAGCCATCTACTGGCTGCTCAGCACCGCCAGGCCTGGATGGGCCCCATCTGCCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312943.10
ENST00000357198.9
ENST00000500323.2
ENST00000501403.6
ENST00000502885.5
ENST00000506493.5
ENST00000510380.5
ENST00000510898.7
CDS GCA 72 bp AGTAGCGGCAGGCTCTGGGGTCCGGGCTCGGCCAGGTaGATTTTCCTGGACGTGGGTGGCTCAGGTCCTGGT +
Preference number: 6 (lower is better)
Translates to: SSGRLWGPGSAR*IFLDVGGSGPG
Trigger: ACCAGGACCTGAGCCACCCACGTCCAGGAAAATGCACCTGGCCGAGCCCGGACCCCAGAGCCTGCCGCTACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS CCA 72 bp GGGGTCCGGGCTCGGCCAGGTGCATTTTCCTGGACGTaGGTGGCTCAGGTCCTGGTGGCATCTCCCGAAGCT +
Preference number: 6 (lower is better)
Translates to: GVRARPGAFSWT*VAQVLVASPEA
Trigger: AGCTTCGGGAGATGCCACCAGGACCTGAGCCACCCACGTCCAGGAAAATGCACCTGGCCGAGCCCGGACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS CCA 72 bp TGCACACTGAAGCGTAGAGCCCGGACGCCAGATCGTTaGGCTCCGGGCCTAGCAGTAGCGGCAGGCTCTGGG +
Preference number: 6 (lower is better)
Translates to: CTLKRRARTPDR*APGLAVAAGSG
Trigger: CCCAGAGCCTGCCGCTACTGCTAGGCCCGGAGCCCAACGATCTGGCGTCCGGGCTCTACGCTTCAGTGTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS TCA 72 bp ATCCCGGACCTCCCAGCTCTCCAGCCGTGCCACGCCTaGTGGGCCTCCTGCATACAGCAGAGCCCACACCTT +
Preference number: 6 (lower is better)
Translates to: IPDLPALQPCHA*WASCIQQSPHL
Trigger: AAGGTGTGGGCTCTGCTGTATGCAGGAGGCCCATCAGGCGTGGCACGGCTGGAGAGCTGGGAGGTCCGGGAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312943.10
ENST00000357198.9
ENST00000500323.2
ENST00000501403.6
ENST00000502885.5
ENST00000506493.5
ENST00000510380.5
ENST00000510898.7
CDS TCA 72 bp CTCATTGCCTGGGGGCCCACTGGCACGCTTGCACACTaGAGCGTAGAGCCCGGACGCCAGATCGTTGGGCTC +
Preference number: 6 (lower is better)
Translates to: LIAWGPTGTLAH*SVEPGRQIVGL
Trigger: GAGCCCAACGATCTGGCGTCCGGGCTCTACGCTTCAGTGTGCAAGCGTGCCAGTGGGCCCCCAGGCAATGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS TCA 72 bp TCTGGCAGAGCCTGCTCAGCCCCTGCCGTCTCAGGCTaGCACCCGCACTCCATTCCACTCCCCATACCTGGG +
Preference number: 6 (lower is better)
Translates to: SGRACSAPAVSG*HPHSIPLPIPG
Trigger: CCCAGGTATGGGGAGTGGAATGGAGTGCGGGTGTCAGCCTGAGACGGCAGGGGCTGAGCAGGCTCTGCCAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502380.1
ENST00000512660.1
CDS CCA 72 bp TCCGGGCTCGGCCAGGTGCATTTTCCTGGACGTGGGTaGCTCAGGTCCTGGTGGCATCTCCCGAAGCTCTCC +
Preference number: 6 (lower is better)
Translates to: SGLGQVHFPGRG*LRSWWHLPKLS
Trigger: GGAGAGCTTCGGGAGATGCCACCAGGACCTGAGCCACCCACGTCCAGGAAAATGCACCTGGCCGAGCCCGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS CCA 72 bp CGTGCGGCTCAGGTTCCCCACCGTGCAGCGTGGGGCTaGCCTCCAGCACACACAGGTTCTCATAGAGGTGCT +
Preference number: 6 (lower is better)
Translates to: RAAQVPHRAAWG*PPAHTGSHRGA
Trigger: AGCACCTCTATGAGAACCTGTGTGTGCTGGAGGCCAGCCCCACGCTGCACGGTGGGGAACCTGAGCCGCACG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS CCA 72 bp CTGCGGGAGGGGAGCGGGAGGGTGAAGACCCTTGGGTaGCAGATTGTCCGTGCCACTTGGCTCAGCACAAGC +
Preference number: 6 (lower is better)
Translates to: LREGSGRVKTLG*QIVRATWLSTS
Trigger: GCTTGTGCTGAGCCAAGTGGCACGGACAATCTGCCACCCAAGGGTCTTCACCCTCCCGCTCCCCTCCCGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500323.2
CDS CAA 90 bp GAGCGGGAGGGTGAAGACCCTTGGGTGGCAGATTGTCCGTGCCACTaGGCTCAGCACAAGCTGCTCGGCAAACGCTCCCAGCCAGGAGCG +
Preference number: 6 (lower is better)
Translates to: EREGEDPWVADCPCH*AQHKLLGKRSQPGA
Trigger: CGCTCCTGGCTGGGAGCGTTTGCCGAGCAGCTTGTGCTGAGCCAAGTGGCACGGACAATCTGCCACCCAAGGGTCTTCACCCTCCCGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500323.2
CDS GCA 72 bp AGAGGTGCTCATTGCCTGGGGGCCCACTGGCACGCTTaGACACTGAAGCGTAGAGCCCGGACGCCAGATCGT +
Preference number: 6 (lower is better)
Translates to: RGAHCLGAHWHA*TLKRRARTPDR
Trigger: ACGATCTGGCGTCCGGGCTCTACGCTTCAGTGTGCAAGCGTGCCAGTGGGCCCCCAGGCAATGAGCACCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS GCA 72 bp TGGCAGATTGTCCGTGCCACTTGGCTCAGCACAAGCTaGTCGGCAAACGCTCCCAGCCAGGAGCGGGCCTCT +
Preference number: 6 (lower is better)
Translates to: WQIVRATWLSTS*SANAPSQERAS
Trigger: AGAGGCCCGCTCCTGGCTGGGAGCGTTTGCCGAGCAGCTTGTGCTGAGCCAAGTGGCACGGACAATCTGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500323.2
CDS CCA 72 bp GTGCATTTTCCTGGACGTGGGTGGCTCAGGTCCTGGTaGCATCTCCCGAAGCTCTCCGGGGGTGTCCAGGGA +
Preference number: 6 (lower is better)
Translates to: VHFPGRGWLRSW*HLPKLSGGVQG
Trigger: TCCCTGGACACCCCCGGAGAGCTTCGGGAGATGCCACCAGGACCTGAGCCACCCACGTCCAGGAAAATGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS CCA 72 bp CAGGTGCATTTTCCTGGACGTGGGTGGCTCAGGTCCTaGTGGCATCTCCCGAAGCTCTCCGGGGGTGTCCAG +
Preference number: 6 (lower is better)
Translates to: QVHFPGRGWLRS*WHLPKLSGGVQ
Trigger: CTGGACACCCCCGGAGAGCTTCGGGAGATGCCACCAGGACCTGAGCCACCCACGTCCAGGAAAATGCACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357198.9
ENST00000501403.6
ENST00000510898.7
CDS CCA 72 bp ACTTCTGCGGGAGGGGAGCGGGAGGGTGAAGACCCTTaGGTGGCAGATTGTCCGTGCCACTTGGCTCAGCAC +
Preference number: 6 (lower is better)
Translates to: TSAGGEREGEDP*VADCPCHLAQH
Trigger: GTGCTGAGCCAAGTGGCACGGACAATCTGCCACCCAAGGGTCTTCACCCTCCCGCTCCCCTCCCGCAGAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500323.2
CDS CCA 72 bp ACTCCTGTATTTCCCATCTCTCCCGGAGGCAGGGTCTaGCAGAGCCTGCTCAGCCCCTGCCGTCTCAGGCTG +
Preference number: 6 (lower is better)
Translates to: TPVFPISPGGRV*QSLLSPCRLRL
Trigger: CAGCCTGAGACGGCAGGGGCTGAGCAGGCTCTGCCAGACCCTGCCTCCGGGAGAGATGGGAAATACAGGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502380.1
ENST00000512660.1
CDS GCA 72 bp CGGGAGGGTGAAGACCCTTGGGTGGCAGATTGTCCGTaGCACTTGGCTCAGCACAAGCTGCTCGGCAAACGC +
Preference number: 6 (lower is better)
Translates to: REGEDPWVADCP*HLAQHKLLGKR
Trigger: GCGTTTGCCGAGCAGCTTGTGCTGAGCCAAGTGGCACGGACAATCTGCCACCCAAGGGTCTTCACCCTCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500323.2
CDS GCA 72 bp GGCTGCATTCTCCACCCACTGTTGGTCCTTGGCAGCTaGCTGGCAGCCAGGGGTCCCCACCTTGCCAAACTT +
Preference number: 6 (lower is better)
Translates to: GCILHPLLVLGS*LAARGPHLAKL
Trigger: AAGTTTGGCAAGGTGGGGACCCCTGGCTGCCAGGCAGCTGCCAAGGACCAACAGTGGGTGGAGAATGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502380.1
ENST00000512660.1
CDS CCA 72 bp GTGAAGACCCTTGGGTGGCAGATTGTCCGTGCCACTTaGCTCAGCACAAGCTGCTCGGCAAACGCTCCCAGC +
Preference number: 6 (lower is better)
Translates to: VKTLGWQIVRAT*LSTSCSANAPS
Trigger: GCTGGGAGCGTTTGCCGAGCAGCTTGTGCTGAGCCAAGTGGCACGGACAATCTGCCACCCAAGGGTCTTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500323.2
CDS CAA 72 bp GGTGAAGACCCTTGGGTGGCAGATTGTCCGTGCCACTaGGCTCAGCACAAGCTGCTCGGCAAACGCTCCCAG +
Preference number: 6 (lower is better)
Translates to: GEDPWVADCPCH*AQHKLLGKRSQ
Trigger: CTGGGAGCGTTTGCCGAGCAGCTTGTGCTGAGCCAAGTGGCACGGACAATCTGCCACCCAAGGGTCTTCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500323.2
CDS CCA 72 bp CTTCCTGCCAGGAGGAGTAGATGGAGTTTTCCTCCATaGGGACCAGGCCCCTCTTGGGAGACTGGGCATCTG +
Preference number: 6 (lower is better)
Translates to: LPARRSRWSFPP*GPGPSWETGHL
Trigger: CAGATGCCCAGTCTCCCAAGAGGGGCCTGGTCCCCATGGAGGAAAACTCCATCTACTCCTCCTGGCAGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312943.10
ENST00000357198.9
ENST00000377112.8
ENST00000500323.2
ENST00000501403.6
ENST00000510380.5
ENST00000510898.7
CDS TCA 72 bp GATGCTGAGATCCTGCCTCATCTGCTAGCGGTCTTGTaGCTGCCGTCCACGTTTCTGCGTGTGCGTCTTTCT +
Preference number: 6 (lower is better)
Translates to: DAEILPHLLAVL*LPSTFLRVRLS
Trigger: AGAAAGACGCACACGCAGAAACGTGGACGGCAGTCACAAGACCGCTAGCAGATGAGGCAGGATCTCAGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509310.1
ENST00000510389.1
CDS GCA 72 bp AGCTTGTGGCCTAAATGGCAGTTCTATGACATCTGCTaGCTCCTCAGTCAACGGAATGGAGGGCTCCCTCCA +
Preference number: 6 (lower is better)
Translates to: SLWPKWQFYDIC*LLSQRNGGLPP
Trigger: TGGAGGGAGCCCTCCATTCCGTTGACTGAGGAGGCAGCAGATGTCATAGAACTGCCATTTAGGCCACAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509310.1
ENST00000510389.1
CDS GCA 72 bp GAGAGCTTGTGGCCTAAATGGCAGTTCTATGACATCTaGTGCCTCCTCAGTCAACGGAATGGAGGGCTCCCT +
Preference number: 6 (lower is better)
Translates to: ESLWPKWQFYDI*CLLSQRNGGLP
Trigger: AGGGAGCCCTCCATTCCGTTGACTGAGGAGGCAGCAGATGTCATAGAACTGCCATTTAGGCCACAAGCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509310.1
ENST00000510389.1
CDS CCA 72 bp TCAAAAGGCCATGAGAACTCGAGCTGGGACTGCTACTaGGTCATGTTTGTAAAGCATCCAGTGGCCGGGCAG +
Preference number: 6 (lower is better)
Translates to: SKGHENSSWDCY*VMFVKHPVAGQ
Trigger: CTGCCCGGCCACTGGATGCTTTACAAACATGACCCAGTAGCAGTCCCAGCTCGAGTTCTCATGGCCTTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500323.2
CDS GCA 72 bp CGTCTCTCAAAAGGCCATGAGAACTCGAGCTGGGACTaGTACTGGGTCATGTTTGTAAAGCATCCAGTGGCC +
Preference number: 6 (lower is better)
Translates to: RLSKGHENSSWD*YWVMFVKHPVA
Trigger: GGCCACTGGATGCTTTACAAACATGACCCAGTAGCAGTCCCAGCTCGAGTTCTCATGGCCTTTTGAGAGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500323.2
CDS CCA 72 bp GCACAGAGCAGGCTTAGGGAGAGCTTGTGGCCTAAATaGCAGTTCTATGACATCTGCTGCCTCCTCAGTCAA +
Preference number: 6 (lower is better)
Translates to: AQSRLRESLWPK*QFYDICCLLSQ
Trigger: TTGACTGAGGAGGCAGCAGATGTCATAGAACTGCCATTTAGGCCACAAGCTCTCCCTAAGCCTGCTCTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509310.1
ENST00000510389.1
CDS TCA 72 bp CCTCCACAAGCATCAATGTCGTCTCTCAAAAGGCCATaGGAACTCGAGCTGGGACTGCTACTGGGTCATGTT +
Preference number: 6 (lower is better)
Translates to: PPQASMSSLKRP*ELELGLLLGHV
Trigger: AACATGACCCAGTAGCAGTCCCAGCTCGAGTTCTCATGGCCTTTTGAGAGACGACATTGATGCTTGTGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500323.2