RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DOK2 (Homo sapiens)

Ensembl gene IDs: ENSG00000147443

Ensembl transcript IDs: ENST00000276420.9, ENST00000517422.5, ENST00000518197.1, ENST00000522011.1, ENST00000523932.1, ENST00000524001.1

Found 173 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAGGAACGGGCCACCGCATCGAAGGGCACGGCATACTCCCCCTCCTaGCCCCGAGGCCGTGGAGCAGGCACCGGTGTGGTGGGTGAAGGC +
Preference number: 1 (lower is better)
Translates to: KERATASKGTAYSPS*PRGRGAGTGVVGEG
Trigger: GCCTTCACCCACCACACCGGTGCCTGCTCCACGGCCTCGGGGCCAGGAGGGGGAGTATGCCGTGCCCTTCGATGCGGTGGCCCGTTCCTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517422.5
3UTR TCA 90 bp GACAGGCCAGGCCTCGGGCTCCAGAAGGGGCAGAGGAGGTTCTTCTaGTGCAGTGGCCAGGAGGAGTCACCAGCAGAAGCCAAGGGGCGG +
Preference number: 1 (lower is better)
Translates to: DRPGLGLQKGQRRFF*CSGQEESPAEAKGR
Trigger: CCGCCCCTTGGCTTCTGCTGGTGACTCCTCCTGGCCACTGCATCAGAAGAACCTCCTCTGCCCCTTCTGGAGCCCGAGGCCTGGCCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276420.9
3UTR CCA 90 bp CTATCAGGCCGGGGCAGCGACGCGGGGATTGTGGCTGGCTGCGGTTaGGGTGTAGCGGGTGCAGCATTCTTCTGGGCAGAGATGGCCTCT +
Preference number: 1 (lower is better)
Translates to: LSGRGSDAGIVAGCG*GVAGAAFFWAEMAS
Trigger: AGAGGCCATCTCTGCCCAGAAGAATGCTGCACCCGCTACACCCCAACCGCAGCCAGCCACAATCCCCGCGTCGCTGCCCCGGCCTGATAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517422.5
3UTR CCA 90 bp AGGGCACCCTTCCTGCTTTGGGATGGTGACTCACCCAGCAGGCCCTaGGAGAGGCAATTTATCAGCCCCAACGAAGACAGGCCAGGCCTC +
Preference number: 1 (lower is better)
Translates to: RAPFLLWDGDSPSRP*ERQFISPNEDRPGL
Trigger: GAGGCCTGGCCTGTCTTCGTTGGGGCTGATAAATTGCCTCTCCCAGGGCCTGCTGGGTGAGTCACCATCCCAAAGCAGGAAGGGTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276420.9
3UTR CCA 90 bp ATTGTGGCTGGCTGCGGTTGGGGTGTAGCGGGTGCAGCATTCTTCTaGGCAGAGATGGCCTCTTCCAGGGCCAAGAAGATCTCATTGCCT +
Preference number: 1 (lower is better)
Translates to: IVAGCGWGVAGAAFF*AEMASSRAKKISLP
Trigger: AGGCAATGAGATCTTCTTGGCCCTGGAAGAGGCCATCTCTGCCCAGAAGAATGCTGCACCCGCTACACCCCAACCGCAGCCAGCCACAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517422.5
3UTR GCA 90 bp TGGGCAGAGATGGCCTCTTCCAGGGCCAAGAAGATCTCATTGCCTTaGCGGGTTTCGAACTCAAAGTTGCCCTCTCCAGAGACGCAGCGA +
Preference number: 1 (lower is better)
Translates to: WAEMASSRAKKISLP*RVSNSKLPSPETQR
Trigger: TCGCTGCGTCTCTGGAGAGGGCAACTTTGAGTTCGAAACCCGGCAAGGCAATGAGATCTTCTTGGCCCTGGAAGAGGCCATCTCTGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517422.5
3UTR-3UTR GCA 90 bp GGAACGGGCCACCGCATCGAAGGGCACGGCATACTCCCCCTCCTGGCCCCGAGGGGGATTGTGGCTGGCTaGGGTTGGGGTGTAGCGGGT +
Preference number: 2 (lower is better)
Translates to: GTGHRIEGHGILPLLAPRGIVAG*GWGVAG
Trigger: ACCCGCTACACCCCAACCGCAGCCAGCCACAATCCC...CCTCGGGGCCAGGAGGGGGAGTATGCCGTGCCCTTCGATGCGGTGGCCCGTTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000517422.5
3UTR CAA 90 bp CTGGGCAGAGATGGCCTCTTCCAGGGCCAAGAAGATCTCATTGCCTaGCCGGGTTTCGAACTCAAAGTTGCCCTCTCCAGAGACGCAGCG +
Preference number: 2 (lower is better)
Translates to: LGRDGLFQGQEDLIA*PGFELKVALSRDAA
Trigger: CGCTGCGTCTCTGGAGAGGGCAACTTTGAGTTCGAAACCCGGCAAGGCAATGAGATCTTCTTGGCCCTGGAAGAGGCCATCTCTGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517422.5
3UTR-3UTR CCA 90 bp GAAGTGGCCATCAGCAGGCAGGAGGCTTGCATAGCCAAGCAGCCCAAGCAATTGGCACCCTTCCTGCTTTaGGATGGTGACTCACCCAGC +
Preference number: 2 (lower is better)
Translates to: EVAISRQEACIAKQPKQLAPFLL*DGDSPS
Trigger: GCTGGGTGAGTCACCATCCCAAAGCAGGAAGGGTGC...CAATTGCTTGGGCTGCTTGGCTATGCAAGCCTCCTGCCTGCTGATGGCCACTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276420.9
3UTR-3UTR TCA 90 bp GGAGGCTTGCATAGCCAAGCAGCCCAAGCAATTGCTGACATCCTTTTGTCCTCTCCTGCTTTGGGATGGTaGCTCACCCAGCAGGCCCTG +
Preference number: 2 (lower is better)
Translates to: GGLHSQAAQAIADILLSSPALGW*LTQQAL
Trigger: CAGGGCCTGCTGGGTGAGTCACCATCCCAAAGCAGG...AGAGGACAAAAGGATGTCAGCAATTGCTTGGGCTGCTTGGCTATGCAAGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276420.9
3UTR-3UTR CCA 90 bp GGAGGCTTGCATAGCCAAGCAGCCCAAGCAATTGCTGACATCCTTTTGTCCTCTGAAGCCAAGGGGCGGTaGACCATCCCTCTGCTGCCT +
Preference number: 2 (lower is better)
Translates to: GGLHSQAAQAIADILLSSEAKGR*TIPLLP
Trigger: AGGCAGCAGAGGGATGGTCCACCGCCCCTTGGCTTC...AGAGGACAAAAGGATGTCAGCAATTGCTTGGGCTGCTTGGCTATGCAAGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276420.9
3UTR-3UTR CCA 90 bp GAAGTGGCCATCAGCAGGCAGGAGGCTTGCATAGCCAAGCAGCCCAAGCAATTGTCACCCAGCAGGCCCTaGGAGAGGCAATTTATCAGC +
Preference number: 2 (lower is better)
Translates to: EVAISRQEACIAKQPKQLSPSRP*ERQFIS
Trigger: GCTGATAAATTGCCTCTCCCAGGGCCTGCTGGGTGA...CAATTGCTTGGGCTGCTTGGCTATGCAAGCCTCCTGCCTGCTGATGGCCACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276420.9
3UTR CAA 90 bp GGAGGCTTGCATAGCCAAGCAGCCCAAGCAATTGCTGACATCCTTTaGTCCTCTGCCCTAAATGCCCCAGGTTCCTCCTCAGCTGGGGAA +
Preference number: 2 (lower is better)
Translates to: GGLHSQAAQAIADIL*SSALNAPGSSSAGE
Trigger: TTCCCCAGCTGAGGAGGAACCTGGGGCATTTAGGGCAGAGGACAAAAGGATGTCAGCAATTGCTTGGGCTGCTTGGCTATGCAAGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276420.9
3UTR-3UTR TCA 90 bp GGAGGCTTGCATAGCCAAGCAGCCCAAGCAATTGCTGACATCCTTTTGTCCTCTCAGAGGAGGTTCTTCTaGTGCAGTGGCCAGGAGGAG +
Preference number: 2 (lower is better)
Translates to: GGLHSQAAQAIADILLSSQRRFF*CSGQEE
Trigger: CTCCTCCTGGCCACTGCATCAGAAGAACCTCCTCTG...AGAGGACAAAAGGATGTCAGCAATTGCTTGGGCTGCTTGGCTATGCAAGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276420.9
3UTR-3UTR CCA 90 bp GGAGGCTTGCATAGCCAAGCAGCCCAAGCAATTGCTGACATCCTTTTGTCCTCTGTTCTTCTGATGCAGTaGCCAGGAGGAGTCACCAGC +
Preference number: 2 (lower is better)
Translates to: GGLHSQAAQAIADILLSSVLLMQ*PGGVTS
Trigger: GCTGGTGACTCCTCCTGGCCACTGCATCAGAAGAAC...AGAGGACAAAAGGATGTCAGCAATTGCTTGGGCTGCTTGGCTATGCAAGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276420.9
3UTR CCA 72 bp CCTGGCCCCGAGGCCGTGGAGCAGGCACCGGTGTGGTaGGTGAAGGCGGCGGCAGTGAGTCATGCGGCCGAG +
Preference number: 3 (lower is better)
Translates to: PGPEAVEQAPVW*VKAAAVSHAAE
Trigger: CTCGGCCGCATGACTCACTGCCGCCGCCTTCACCCACCACACCGGTGCCTGCTCCACGGCCTCGGGGCCAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517422.5
3UTR CCA 72 bp CCTCCTGGCCCCGAGGCCGTGGAGCAGGCACCGGTGTaGTGGGTGAAGGCGGCGGCAGTGAGTCATGCGGCC +
Preference number: 3 (lower is better)
Translates to: PPGPEAVEQAPV*WVKAAAVSHAA
Trigger: GGCCGCATGACTCACTGCCGCCGCCTTCACCCACCACACCGGTGCCTGCTCCACGGCCTCGGGGCCAGGAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517422.5
3UTR CCA 72 bp GCCACCGCATCGAAGGGCACGGCATACTCCCCCTCCTaGCCCCGAGGCCGTGGAGCAGGCACCGGTGTGGTG +
Preference number: 3 (lower is better)
Translates to: ATASKGTAYSPS*PRGRGAGTGVV
Trigger: CACCACACCGGTGCCTGCTCCACGGCCTCGGGGCCAGGAGGGGGAGTATGCCGTGCCCTTCGATGCGGTGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517422.5
3UTR-3UTR CAA 90 bp GGAACGGGCCACCGCATCGAAGGGCACGGCATACTCCCCCTCCTGGCCCCGAGGTGTGGCTGGCTGCGGTaGGGGTGTAGCGGGTGCAGC +
Preference number: 3 (lower is better)
Translates to: GTGHRIEGHGILPLLAPRCGWLR*GCSGCS
Trigger: GCTGCACCCGCTACACCCCAACCGCAGCCAGCCACA...CCTCGGGGCCAGGAGGGGGAGTATGCCGTGCCCTTCGATGCGGTGGCCCGTTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000517422.5
3UTR CCA 72 bp CGGGGCAGCGACGCGGGGATTGTGGCTGGCTGCGGTTaGGGTGTAGCGGGTGCAGCATTCTTCTGGGCAGAG +
Preference number: 3 (lower is better)
Translates to: RGSDAGIVAGCG*GVAGAAFFWAE
Trigger: CTCTGCCCAGAAGAATGCTGCACCCGCTACACCCCAACCGCAGCCAGCCACAATCCCCGCGTCGCTGCCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517422.5
3UTR TCA 72 bp GGCCTCGGGCTCCAGAAGGGGCAGAGGAGGTTCTTCTaGTGCAGTGGCCAGGAGGAGTCACCAGCAGAAGCC +
Preference number: 3 (lower is better)
Translates to: GLGLQKGQRRFF*CSGQEESPAEA
Trigger: GGCTTCTGCTGGTGACTCCTCCTGGCCACTGCATCAGAAGAACCTCCTCTGCCCCTTCTGGAGCCCGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276420.9
3UTR GCA 72 bp GTAGGAGGAGGGTGGTTCTCTCCAGGGCACCCTTCCTaGTTTGGGATGGTGACTCACCCAGCAGGCCCTGGG +
Preference number: 3 (lower is better)
Translates to: VGGGWFSPGHPS*FGMVTHPAGPG
Trigger: CCCAGGGCCTGCTGGGTGAGTCACCATCCCAAAGCAGGAAGGGTGCCCTGGAGAGAACCACCCTCCTCCTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276420.9
3UTR CCA 72 bp AGGAGGGTGGTTCTCTCCAGGGCACCCTTCCTGCTTTaGGATGGTGACTCACCCAGCAGGCCCTGGGAGAGG +
Preference number: 3 (lower is better)
Translates to: RRVVLSRAPFLL*DGDSPSRPWER
Trigger: CCTCTCCCAGGGCCTGCTGGGTGAGTCACCATCCCAAAGCAGGAAGGGTGCCCTGGAGAGAACCACCCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276420.9
3UTR GCA 72 bp GGGGATTGTGGCTGGCTGCGGTTGGGGTGTAGCGGGTaGAGCATTCTTCTGGGCAGAGATGGCCTCTTCCAG +
Preference number: 3 (lower is better)
Translates to: GDCGWLRLGCSG*SILLGRDGLFQ
Trigger: CTGGAAGAGGCCATCTCTGCCCAGAAGAATGCTGCACCCGCTACACCCCAACCGCAGCCAGCCACAATCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517422.5
3UTR CCA 72 bp GGCTGCGGTTGGGGTGTAGCGGGTGCAGCATTCTTCTaGGCAGAGATGGCCTCTTCCAGGGCCAAGAAGATC +
Preference number: 3 (lower is better)
Translates to: GCGWGVAGAAFF*AEMASSRAKKI
Trigger: GATCTTCTTGGCCCTGGAAGAGGCCATCTCTGCCCAGAAGAATGCTGCACCCGCTACACCCCAACCGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517422.5
3UTR-3UTR CAA 90 bp GGGGATTGTGGCTGGCTGCGGTTGGGGTGTAGCGGGTGCAGCATTCTTCTGGGCGCCAAGAAGATCTCATaGCCTTGCCGGGTTTCGAAC +
Preference number: 3 (lower is better)
Translates to: GDCGWLRLGCSGCSILLGAKKIS*PCRVSN
Trigger: GTTCGAAACCCGGCAAGGCAATGAGATCTTCTTGGC...GCCCAGAAGAATGCTGCACCCGCTACACCCCAACCGCAGCCAGCCACAATCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517422.5
3UTR GCA 72 bp GCTGTCCCTGAAGTGGCCATCAGCAGGCAGGAGGCTTaGATAGCCAAGCAGCCCAAGCAATTGCTGACATCC +
Preference number: 3 (lower is better)
Translates to: AVPEVAISRQEA*IAKQPKQLLTS
Trigger: GGATGTCAGCAATTGCTTGGGCTGCTTGGCTATGCAAGCCTCCTGCCTGCTGATGGCCACTTCAGGGACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276420.9
3UTR-3UTR CAA 90 bp ATCTCATTGCCTTGCCGGGTTTCGAACTCAAAGTTGCCCTCTCCAGAGACGCAGAAGGAAAAGGTTACCTaGTCCCGCCCAAAGCGCCGC +
Preference number: 3 (lower is better)
Translates to: ISLPCRVSNSKLPSPETQKEKVT*SRPKRR
Trigger: GCGGCGCTTTGGGCGGGACAAGGTAACCTTTTCCTT...CTGCGTCTCTGGAGAGGGCAACTTTGAGTTCGAAACCCGGCAAGGCAATGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517422.5
3UTR GCA 72 bp ATGGCCTCTTCCAGGGCCAAGAAGATCTCATTGCCTTaGCGGGTTTCGAACTCAAAGTTGCCCTCTCCAGAG +
Preference number: 3 (lower is better)
Translates to: MASSRAKKISLP*RVSNSKLPSPE
Trigger: CTCTGGAGAGGGCAACTTTGAGTTCGAAACCCGGCAAGGCAATGAGATCTTCTTGGCCCTGGAAGAGGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517422.5
3UTR GCA 72 bp CAGAGATGGCCTCTTCCAGGGCCAAGAAGATCTCATTaGCTTGCCGGGTTTCGAACTCAAAGTTGCCCTCTC +
Preference number: 3 (lower is better)
Translates to: QRWPLPGPRRSH*LAGFRTQSCPL
Trigger: GAGAGGGCAACTTTGAGTTCGAAACCCGGCAAGGCAATGAGATCTTCTTGGCCCTGGAAGAGGCCATCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517422.5
CDS-3UTR CCA 90 bp GGGCACTCTCCCCAGCCCGGAGGGTATAGGACCCCCGCAGGTGGCACCTCTCACCTGGCCCCGAGGCCGTaGAGCAGGCACCGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: GHSPQPGGYRTPAGGTSHLAPRP*SRHRCG
Trigger: ACCACACCGGTGCCTGCTCCACGGCCTCGGGGCCAG...GTGAGAGGTGCCACCTGCGGGGGTCCTATACCCTCCGGGCTGGGGAGAGTGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000517422.5
CDS-3UTR CCA 90 bp GGGCACTCTCCCCAGCCCGGAGGGTATAGGACCCCCGCAGGTGGCACCTCTCACGCGACGCGGGGATTGTaGCTGGCTGCGGTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: GHSPQPGGYRTPAGGTSHATRGL*LAAVGV
Trigger: CACCCCAACCGCAGCCAGCCACAATCCCCGCGTCGC...GTGAGAGGTGCCACCTGCGGGGGTCCTATACCCTCCGGGCTGGGGAGAGTGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000517422.5
CDS-3UTR GCA 90 bp GGAGGAGTCACCAGCAGAAGCCAAGGGGCGGTGGACCATCCCTCTGCTGCCTCTGTCGCCGCGCTCCGCTaGAGGGGCCGCCAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: GGVTSRSQGAVDHPSAASVAALR*RGRQEV
Trigger: TACCTCCTGGCGGCCCCTGCAGCGGAGCGCGGCGAC...AGAGGCAGCAGAGGGATGGTCCACCGCCCCTTGGCTTCTGCTGGTGACTCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR GCA 90 bp AAACCTGTAGGGCCAGTCGTACAGCTGGGTCCCTGGCTCGGGCCCACCCCACAGAGGAGGCAGATGGCCTaGACCCAGTCGCCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: KPVGPVVQLGPWLGPTPQRRQMA*TQSPRS
Trigger: GGAGCGCGGCGACTGGGTGCAGGCCATCTGCCTCCT...CTGTGGGGTGGGCCCGAGCCAGGGACCCAGCTGTACGACTGGCCCTACAGGTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517422.5
CDS-3UTR GCA 90 bp GGGCACTCTCCCCAGCCCGGAGGGTATAGGACCCCCGCAGGTGGCACCTCTCACGGGATTGTGGCTGGCTaGGGTTGGGGTGTAGCGGGT +
Preference number: 4 (lower is better)
Translates to: GHSPQPGGYRTPAGGTSHGIVAG*GWGVAG
Trigger: ACCCGCTACACCCCAACCGCAGCCAGCCACAATCCC...GTGAGAGGTGCCACCTGCGGGGGTCCTATACCCTCCGGGCTGGGGAGAGTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000517422.5
CDS-3UTR GCA 90 bp GGAGGAGTCACCAGCAGAAGCCAAGGGGCGGTGGACCATCCCTCTGCTGCCTCTCGCCTGCCTCCTCCATaGCTCACCCCGGGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: GGVTSRSQGAVDHPSAASRLPPP*LTPGLL
Trigger: CAGGAGCCCCGGGGTGAGGCATGGAGGAGGCAGGCG...AGAGGCAGCAGAGGGATGGTCCACCGCCCCTTGGCTTCTGCTGGTGACTCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR GCA 90 bp GGGTGGTTCTCTCCAGGGCACCCTTCCTGCTTTGGGATGGTGACTCACCCAGCATGGTGTCCCGGGGGCTaGTGGCCTCTCCGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: GWFSPGHPSCFGMVTHPAWCPGG*WPLRRP
Trigger: AGGCCGGCGGAGAGGCCAGCAGCCCCCGGGACACCA...TGCTGGGTGAGTCACCATCCCAAAGCAGGAAGGGTGCCCTGGAGAGAACCACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR CCA 90 bp GGAGGAGTCACCAGCAGAAGCCAAGGGGCGGTGGACCATCCCTCTGCTGCCTCTGGCCAGTCGTACAGCTaGGTCCCTGGCTCGGGCCCA +
Preference number: 4 (lower is better)
Translates to: GGVTSRSQGAVDHPSAASGQSYS*VPGSGP
Trigger: TGGGCCCGAGCCAGGGACCCAGCTGTACGACTGGCC...AGAGGCAGCAGAGGGATGGTCCACCGCCCCTTGGCTTCTGCTGGTGACTCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR GCA 90 bp CCCGAGGCCGTGGAGCAGGCACCGGTGTGGTGGGTGAAGGCGGCGGCAGTGAGTGAAGCCTTGTTTCACTaGCCCGTCTCCCATCCTCTG +
Preference number: 4 (lower is better)
Translates to: PEAVEQAPVWWVKAAAVSEALFH*PVSHPL
Trigger: CAGAGGATGGGAGACGGGGCAGTGAAACAAGGCTTC...ACTCACTGCCGCCGCCTTCACCCACCACACCGGTGCCTGCTCCACGGCCTCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517422.5
CDS-3UTR GCA 90 bp CCCGAGGCCGTGGAGCAGGCACCGGTGTGGTGGGTGAAGGCGGCGGCAGTGAGTTTGGGGTGTAGCGGGTaGAGCATTCTTCTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: PEAVEQAPVWWVKAAAVSLGCSG*SILLGR
Trigger: TCTGCCCAGAAGAATGCTGCACCCGCTACACCCCAA...ACTCACTGCCGCCGCCTTCACCCACCACACCGGTGCCTGCTCCACGGCCTCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517422.5
CDS-3UTR CCA 90 bp GGAGGAGTCACCAGCAGAAGCCAAGGGGCGGTGGACCATCCCTCTGCTGCCTCTCCAGGAAGAAGGCACTaGTGTCCCGGGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GGVTSRSQGAVDHPSAASPGRRH*CPGGCW
Trigger: CCAGCAGCCCCCGGGACACCAGTGCCTTCTTCCTGG...AGAGGCAGCAGAGGGATGGTCCACCGCCCCTTGGCTTCTGCTGGTGACTCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR CCA 90 bp TGTGGCTGGCTGCGGTTGGGGTGTAGCGGGTGCAGCATTCTTCTGGGCAGAGATGTACAGCTGGGTCCCTaGCTCGGGCCCACCCCACAG +
Preference number: 4 (lower is better)
Translates to: CGWLRLGCSGCSILLGRDVQLGP*LGPTPQ
Trigger: CTGTGGGGTGGGCCCGAGCCAGGGACCCAGCTGTAC...ATCTCTGCCCAGAAGAATGCTGCACCCGCTACACCCCAACCGCAGCCAGCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517422.5
CDS-3UTR CCA 90 bp GGGTGGTTCTCTCCAGGGCACCCTTCCTGCTTTGGGATGGTGACTCACCCAGCAGAGCAGGCACCGGTGTaGTGGGTGAAGGCGGCGGCA +
Preference number: 4 (lower is better)
Translates to: GWFSPGHPSCFGMVTHPAEQAPV*WVKAAA
Trigger: TGCCGCCGCCTTCACCCACCACACCGGTGCCTGCTC...TGCTGGGTGAGTCACCATCCCAAAGCAGGAAGGGTGCCCTGGAGAGAACCACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR GCA 90 bp GAGATGGCCTCTTCCAGGGCCAAGAAGATCTCATTGCCTTGCCGGGTTTCGAACGTCGCCGCGCTCCGCTaGAGGGGCCGCCAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: EMASSRAKKISLPCRVSNVAALR*RGRQEV
Trigger: TACCTCCTGGCGGCCCCTGCAGCGGAGCGCGGCGAC...GTTCGAAACCCGGCAAGGCAATGAGATCTTCTTGGCCCTGGAAGAGGCCATCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517422.5
CDS-3UTR CCA 90 bp GGAGGAGTCACCAGCAGAAGCCAAGGGGCGGTGGACCATCCCTCTGCTGCCTCTAGGCTGTCCCTGAAGTaGCCATCAGCAGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: GGVTSRSQGAVDHPSAASRLSLK*PSAGRR
Trigger: CCTCCTGCCTGCTGATGGCCACTTCAGGGACAGCCT...AGAGGCAGCAGAGGGATGGTCCACCGCCCCTTGGCTTCTGCTGGTGACTCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR TCA 90 bp GAAGTGGCCATCAGCAGGCAGGAGGCTTGCATAGCCAAGCAGCCCAAGCAATTGCGACCCTCCATACAGTaGGGCGCCGAAGCGGCGCCA +
Preference number: 4 (lower is better)
Translates to: EVAISRQEACIAKQPKQLRPSIQ*GAEAAP
Trigger: TGGCGCCGCTTCGGCGCCTCACTGTATGGAGGGTCG...CAATTGCTTGGGCTGCTTGGCTATGCAAGCCTCCTGCCTGCTGATGGCCACTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR GCA 90 bp GGGCACCCTTCCTGCTTTGGGATGGTGACTCACCCAGCAGGCCCTGGGAGAGGCGAGCTGAGGAGGGACTaGCAAGATGCCCCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: GHPSCFGMVTHPAGPGRGELRRD*QDAPEV
Trigger: AACTTCAGGGGCATCTTGGCAGTCCCTCCTCAGCTC...GCCTCTCCCAGGGCCTGCTGGGTGAGTCACCATCCCAAAGCAGGAAGGGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR GCA 90 bp GGGTGGTTCTCTCCAGGGCACCCTTCCTGCTTTGGGATGGTGACTCACCCAGCACTGTCAGCTGTCGCCTaGCTCCTCCATGCCTCACCC +
Preference number: 4 (lower is better)
Translates to: GWFSPGHPSCFGMVTHPALSAVA*LLHASP
Trigger: GGGTGAGGCATGGAGGAGGCAGGCGACAGCTGACAG...TGCTGGGTGAGTCACCATCCCAAAGCAGGAAGGGTGCCCTGGAGAGAACCACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR GCA 90 bp GAAGTGGCCATCAGCAGGCAGGAGGCTTGCATAGCCAAGCAGCCCAAGCAATTGCCGGCTGGCTGGACATaGTGGAGGCCAGCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: EVAISRQEACIAKQPKQLPAGWT*WRPAGS
Trigger: GGACCCTGCTGGCCTCCAGCATGTCCAGCCAGCCGG...CAATTGCTTGGGCTGCTTGGCTATGCAAGCCTCCTGCCTGCTGATGGCCACTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR GCA 90 bp GGAGGAGTCACCAGCAGAAGCCAAGGGGCGGTGGACCATCCCTCTGCTGCCTCTCCAGGGCACCCTTCCTaGTTTGGGATGGTGACTCAC +
Preference number: 4 (lower is better)
Translates to: GGVTSRSQGAVDHPSAASPGHPS*FGMVTH
Trigger: GTGAGTCACCATCCCAAAGCAGGAAGGGTGCCCTGG...AGAGGCAGCAGAGGGATGGTCCACCGCCCCTTGGCTTCTGCTGGTGACTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR GCA 90 bp GGCTTGCATAGCCAAGCAGCCCAAGCAATTGCTGACATCCTTTTGTCCTCTGCCCGCCATCCCCCTGGGTaGCTGGGCCCAGGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: GLHSQAAQAIADILLSSARHPPG*LGPGCP
Trigger: GGGACAGCCTGGGCCCAGGCACCCAGGGGGATGGCG...GGCAGAGGACAAAAGGATGTCAGCAATTGCTTGGGCTGCTTGGCTATGCAAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR CCA 90 bp TGTCCCGCCCAAAGCGCCGCAGAAACCTGTAGGGCCAGTCGTACAGCTGGGTCCGGTACAGGCGCTCCTTaGTCTCCAGGAAGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: CPAQSAAETCRASRTAGSGTGAP*SPGRRH
Trigger: GTGCCTTCTTCCTGGAGACCAAGGAGCGCCTGTACC...GGACCCAGCTGTACGACTGGCCCTACAGGTTTCTGCGGCGCTTTGGGCGGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517422.5
CDS-3UTR CCA 90 bp GCCCAAGCAATTGCTGACATCCTTTTGTCCTCTGCCCTAAATGCCCCAGGTTCCCTGCCGCCATCCCCCTaGGTGCCTGGGCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: AQAIADILLSSALNAPGSLPPSP*VPGPRL
Trigger: CAGCCTGGGCCCAGGCACCCAGGGGGATGGCGGCAG...GGAACCTGGGGCATTTAGGGCAGAGGACAAAAGGATGTCAGCAATTGCTTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR CCA 90 bp TGTCCCGCCCAAAGCGCCGCAGAAACCTGTAGGGCCAGTCGTACAGCTGGGTCCACAGCAAATTCCTTGTaGGGGCCGAGGGGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: CPAQSAAETCRASRTAGSTANSL*GPRGRP
Trigger: TGGCCTTCCCCTCGGCCCCCACAAGGAATTTGCTGT...GGACCCAGCTGTACGACTGGCCCTACAGGTTTCTGCGGCGCTTTGGGCGGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517422.5
CDS-3UTR TCA 90 bp GAAGTGGCCATCAGCAGGCAGGAGGCTTGCATAGCCAAGCAGCCCAAGCAATTGGGGTCGGCCAGGAGCTaGGGAGGGACTGCCAAGATG +
Preference number: 4 (lower is better)
Translates to: EVAISRQEACIAKQPKQLGSARS*GGTAKM
Trigger: CATCTTGGCAGTCCCTCCTCAGCTCCTGGCCGACCC...CAATTGCTTGGGCTGCTTGGCTATGCAAGCCTCCTGCCTGCTGATGGCCACTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR GCA 90 bp GAGGCCGTGGAGCAGGCACCGGTGTGGTGGGTGAAGGCGGCGGCAGTGAGTCATTTTCGAACTCAAAGTTaGCCTCTCCAGAGACGCAGC +
Preference number: 4 (lower is better)
Translates to: EAVEQAPVWWVKAAAVSHFRTQS*PLQRRS
Trigger: GCTGCGTCTCTGGAGAGGGCAACTTTGAGTTCGAAA...ATGACTCACTGCCGCCGCCTTCACCCACCACACCGGTGCCTGCTCCACGGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517422.5
CDS-3UTR CCA 90 bp GAAGTGGCCATCAGCAGGCAGGAGGCTTGCATAGCCAAGCAGCCCAAGCAATTGTCCTGCCCGGCTGGCTaGACATGCTGGAGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: EVAISRQEACIAKQPKQLSCPAG*TCWRPA
Trigger: TGCTGGCCTCCAGCATGTCCAGCCAGCCGGGCAGGA...CAATTGCTTGGGCTGCTTGGCTATGCAAGCCTCCTGCCTGCTGATGGCCACTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR TCA 90 bp GAGGCCGTGGAGCAGGCACCGGTGTGGTGGGTGAAGGCGGCGGCAGTGAGTCATAACGTCTGCTGCTGCTaGAGATACAAGAAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: EAVEQAPVWWVKAAAVSHNVCCC*RYKKPC
Trigger: ACAAGGCTTCTTGTATCTTCAGCAGCAGCAGACGTT...ATGACTCACTGCCGCCGCCTTCACCCACCACACCGGTGCCTGCTCCACGGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517422.5
CDS-3UTR TCA 90 bp GAAGTGGCCATCAGCAGGCAGGAGGCTTGCATAGCCAAGCAGCCCAAGCAATTGCCTGCTTTGGGATGGTaGCTCACCCAGCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: EVAISRQEACIAKQPKQLPALGW*LTQQAL
Trigger: CAGGGCCTGCTGGGTGAGTCACCATCCCAAAGCAGG...CAATTGCTTGGGCTGCTTGGCTATGCAAGCCTCCTGCCTGCTGATGGCCACTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR GCA 90 bp GGCTTGCATAGCCAAGCAGCCCAAGCAATTGCTGACATCCTTTTGTCCTCTGCCTTCTCCGGGCCCTCCTaGAGCTCCAGCCGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: GLHSQAAQAIADILLSSAFSGPS*SSSRAK
Trigger: CTTGGCCCGGCTGGAGCTGCAGGAGGGCCCGGAGAA...GGCAGAGGACAAAAGGATGTCAGCAATTGCTTGGGCTGCTTGGCTATGCAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR GCA 90 bp GATCTCATTGCCTTGCCGGGTTTCGAACTCAAAGTTGCCCTCTCCAGAGACGCATTCTCCGGGCCCTCCTaGAGCTCCAGCCGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: DLIALPGFELKVALSRDAFSGPS*SSSRAK
Trigger: CTTGGCCCGGCTGGAGCTGCAGGAGGGCCCGGAGAA...TGCGTCTCTGGAGAGGGCAACTTTGAGTTCGAAACCCGGCAAGGCAATGAGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517422.5
CDS-3UTR GCA 90 bp GCAGGAGGCTTGCATAGCCAAGCAGCCCAAGCAATTGCTGACATCCTTTTGTCCAGGAGGCAGATGGCCTaGACCCAGTCGCCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: AGGLHSQAAQAIADILLSRRQMA*TQSPRS
Trigger: GGAGCGCGGCGACTGGGTGCAGGCCATCTGCCTCCT...GGACAAAAGGATGTCAGCAATTGCTTGGGCTGCTTGGCTATGCAAGCCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR GCA 90 bp GGGTGGTTCTCTCCAGGGCACCCTTCCTGCTTTGGGATGGTGACTCACCCAGCAGGACCATCCCTCTGCTaGCTCTGTCACTTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: GWFSPGHPSCFGMVTHPAGPSLC*LCHFGP
Trigger: AGGCCCAAAGTGACAGAGGCAGCAGAGGGATGGTCC...TGCTGGGTGAGTCACCATCCCAAAGCAGGAAGGGTGCCCTGGAGAGAACCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR GCA 90 bp GAAGTGGCCATCAGCAGGCAGGAGGCTTGCATAGCCAAGCAGCCCAAGCAATTGAAAGGTGCAGGAAGCTaGCGCCATCCCCCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: EVAISRQEACIAKQPKQLKGAGS*RHPPGC
Trigger: GCACCCAGGGGGATGGCGGCAGCTTCCTGCACCTTT...CAATTGCTTGGGCTGCTTGGCTATGCAAGCCTCCTGCCTGCTGATGGCCACTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR CCA 90 bp GGCTTGCATAGCCAAGCAGCCCAAGCAATTGCTGACATCCTTTTGTCCTCTGCCAGGCCAGGAGGCAGATaGCCTGCACCCAGTCGCCGC +
Preference number: 4 (lower is better)
Translates to: GLHSQAAQAIADILLSSARPGGR*PAPSRR
Trigger: GCGGCGACTGGGTGCAGGCCATCTGCCTCCTGGCCT...GGCAGAGGACAAAAGGATGTCAGCAATTGCTTGGGCTGCTTGGCTATGCAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR CCA 90 bp GAGATGGCCTCTTCCAGGGCCAAGAAGATCTCATTGCCTTGCCGGGTTTCGAACGTGGCTGGCTGCGGTTaGGGTGTAGCGGGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: EMASSRAKKISLPCRVSNVAGCG*GVAGAA
Trigger: TGCTGCACCCGCTACACCCCAACCGCAGCCAGCCAC...GTTCGAAACCCGGCAAGGCAATGAGATCTTCTTGGCCCTGGAAGAGGCCATCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517422.5
CDS-3UTR CCA 90 bp GGCTTGCATAGCCAAGCAGCCCAAGCAATTGCTGACATCCTTTTGTCCTCTGCCGCGACGCGGGGATTGTaGCTGGCTGCGGTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: GLHSQAAQAIADILLSSAATRGL*LAAVGV
Trigger: CACCCCAACCGCAGCCAGCCACAATCCCCGCGTCGC...GGCAGAGGACAAAAGGATGTCAGCAATTGCTTGGGCTGCTTGGCTATGCAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR CCA 90 bp AGATCTCATTGCCTTGCCGGGTTTCGAACTCAAAGTTGCCCTCTCCAGAGACGCGAGCAGGCACCGGTGTaGTGGGTGAAGGCGGCGGCA +
Preference number: 4 (lower is better)
Translates to: RSHCLAGFRTQSCPLQRREQAPV*WVKAAA
Trigger: TGCCGCCGCCTTCACCCACCACACCGGTGCCTGCTC...GCGTCTCTGGAGAGGGCAACTTTGAGTTCGAAACCCGGCAAGGCAATGAGATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517422.5
CDS-3UTR CCA 90 bp GGAGGCTTGCATAGCCAAGCAGCCCAAGCAATTGCTGACATCCTTTTGTCCTCTCTGGCCCCGAGGCCGTaGAGCAGGCACCGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: GGLHSQAAQAIADILLSSLAPRP*SRHRCG
Trigger: ACCACACCGGTGCCTGCTCCACGGCCTCGGGGCCAG...AGAGGACAAAAGGATGTCAGCAATTGCTTGGGCTGCTTGGCTATGCAAGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR CCA 90 bp GCCCAAGCAATTGCTGACATCCTTTTGTCCTCTGCCCTAAATGCCCCAGGTTCCGCATACTCCCCCTCCTaGCCCCGAGGCCGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: AQAIADILLSSALNAPGSAYSPS*PRGRGA
Trigger: TGCTCCACGGCCTCGGGGCCAGGAGGGGGAGTATGC...GGAACCTGGGGCATTTAGGGCAGAGGACAAAAGGATGTCAGCAATTGCTTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR CCA 90 bp GGGTGGTTCTCTCCAGGGCACCCTTCCTGCTTTGGGATGGTGACTCACCCAGCAGGCTCATCGTATATGTaGTCAGGTCGAGGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GWFSPGHPSCFGMVTHPAGSSYM*SGRGGR
Trigger: CCTGCCCCCTCGACCTGACCACATATACGATGAGCC...TGCTGGGTGAGTCACCATCCCAAAGCAGGAAGGGTGCCCTGGAGAGAACCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR CCA 90 bp GAAGTGGCCATCAGCAGGCAGGAGGCTTGCATAGCCAAGCAGCCCAAGCAATTGGAAATCCTGCCCGGCTaGCTGGACATGCTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: EVAISRQEACIAKQPKQLEILPG*LDMLEA
Trigger: GGCCTCCAGCATGTCCAGCCAGCCGGGCAGGATTTC...CAATTGCTTGGGCTGCTTGGCTATGCAAGCCTCCTGCCTGCTGATGGCCACTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR TCA 90 bp GCTTGCATAGCCAAGCAGCCCAAGCAATTGCTGACATCCTTTTGTCCTCTGCCCCCGTCTCCCATCCTCTaGCCATCTCGGAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: ACIAKQPKQLLTSFCPLPPSPIL*PSRSPR
Trigger: CCTGGGGCTCCGAGATGGTCAGAGGATGGGAGACGG...GGGCAGAGGACAAAAGGATGTCAGCAATTGCTTGGGCTGCTTGGCTATGCAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR GCA 90 bp GCAGGAGGCTTGCATAGCCAAGCAGCCCAAGCAATTGCTGACATCCTTTTGTCCATGCAGGGCCGGCTCTaGTTTCCCTCTGGCCCCGAG +
Preference number: 4 (lower is better)
Translates to: AGGLHSQAAQAIADILLSMQGRL*FPSGPE
Trigger: CTCGGGGCCAGAGGGAAAGCAGAGCCGGCCCTGCAT...GGACAAAAGGATGTCAGCAATTGCTTGGGCTGCTTGGCTATGCAAGCCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR GCA 90 bp GGGTGGTTCTCTCCAGGGCACCCTTCCTGCTTTGGGATGGTGACTCACCCAGCAGACGCAGCGACGGCCTaGCTCAAAGGAAAAGGTTAC +
Preference number: 4 (lower is better)
Translates to: GWFSPGHPSCFGMVTHPADAATA*LKGKGY
Trigger: GTAACCTTTTCCTTTGAGGCAGGCCGTCGCTGCGTC...TGCTGGGTGAGTCACCATCCCAAAGCAGGAAGGGTGCCCTGGAGAGAACCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR CCA 90 bp AGATCTCATTGCCTTGCCGGGTTTCGAACTCAAAGTTGCCCTCTCCAGAGACGCCCAGGAAGAAGGCACTaGTGTCCCGGGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RSHCLAGFRTQSCPLQRRPGRRH*CPGGCW
Trigger: CCAGCAGCCCCCGGGACACCAGTGCCTTCTTCCTGG...GCGTCTCTGGAGAGGGCAACTTTGAGTTCGAAACCCGGCAAGGCAATGAGATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517422.5
CDS-3UTR CCA 90 bp GGAGGCTTGCATAGCCAAGCAGCCCAAGCAATTGCTGACATCCTTTTGTCCTCTGTACAGCTGGGTCCCTaGCTCGGGCCCACCCCACAG +
Preference number: 4 (lower is better)
Translates to: GGLHSQAAQAIADILLSSVQLGP*LGPTPQ
Trigger: CTGTGGGGTGGGCCCGAGCCAGGGACCCAGCTGTAC...AGAGGACAAAAGGATGTCAGCAATTGCTTGGGCTGCTTGGCTATGCAAGCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR CCA 90 bp GAAGATCTCATTGCCTTGCCGGGTTTCGAACTCAAAGTTGCCCTCTCCAGAGACGGCCAGTCGTACAGCTaGGTCCCTGGCTCGGGCCCA +
Preference number: 4 (lower is better)
Translates to: EDLIALPGFELKVALSRDGQSYS*VPGSGP
Trigger: TGGGCCCGAGCCAGGGACCCAGCTGTACGACTGGCC...GTCTCTGGAGAGGGCAACTTTGAGTTCGAAACCCGGCAAGGCAATGAGATCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517422.5
CDS-3UTR CCA 90 bp GCTTGCATAGCCAAGCAGCCCAAGCAATTGCTGACATCCTTTTGTCCTCTGCCCGTGGCTGGCTGCGGTTaGGGTGTAGCGGGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: ACIAKQPKQLLTSFCPLPVAGCG*GVAGAA
Trigger: TGCTGCACCCGCTACACCCCAACCGCAGCCAGCCAC...GGGCAGAGGACAAAAGGATGTCAGCAATTGCTTGGGCTGCTTGGCTATGCAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR CCA 90 bp GCCCAAGCAATTGCTGACATCCTTTTGTCCTCTGCCCTAAATGCCCCAGGTTCCCGCGGGGATTGTGGCTaGCTGCGGTTGGGGTGTAGC +
Preference number: 4 (lower is better)
Translates to: AQAIADILLSSALNAPGSRGDCG*LRLGCS
Trigger: GCTACACCCCAACCGCAGCCAGCCACAATCCCCGCG...GGAACCTGGGGCATTTAGGGCAGAGGACAAAAGGATGTCAGCAATTGCTTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR CCA 90 bp GAAGATCTCATTGCCTTGCCGGGTTTCGAACTCAAAGTTGCCCTCTCCAGAGACGCATACTCCCCCTCCTaGCCCCGAGGCCGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: EDLIALPGFELKVALSRDAYSPS*PRGRGA
Trigger: TGCTCCACGGCCTCGGGGCCAGGAGGGGGAGTATGC...GTCTCTGGAGAGGGCAACTTTGAGTTCGAAACCCGGCAAGGCAATGAGATCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517422.5
CDS-3UTR CCA 90 bp GGGTGGTTCTCTCCAGGGCACCCTTCCTGCTTTGGGATGGTGACTCACCCAGCATCACCCAGCAGGCCCTaGGAGAGGCAATTTATCAGC +
Preference number: 4 (lower is better)
Translates to: GWFSPGHPSCFGMVTHPASPSRP*ERQFIS
Trigger: GCTGATAAATTGCCTCTCCCAGGGCCTGCTGGGTGA...TGCTGGGTGAGTCACCATCCCAAAGCAGGAAGGGTGCCCTGGAGAGAACCACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR TCA 90 bp GAAGATCTCATTGCCTTGCCGGGTTTCGAACTCAAAGTTGCCCTCTCCAGAGACCCGTCTCCCATCCTCTaGCCATCTCGGAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: EDLIALPGFELKVALSRDPSPIL*PSRSPR
Trigger: CCTGGGGCTCCGAGATGGTCAGAGGATGGGAGACGG...GTCTCTGGAGAGGGCAACTTTGAGTTCGAAACCCGGCAAGGCAATGAGATCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517422.5
CDS-3UTR TCA 90 bp GGAGGAGTCACCAGCAGAAGCCAAGGGGCGGTGGACCATCCCTCTGCTGCCTCTAACGTCTGCTGCTGCTaGAGATACAAGAAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: GGVTSRSQGAVDHPSAASNVCCC*RYKKPC
Trigger: ACAAGGCTTCTTGTATCTTCAGCAGCAGCAGACGTT...AGAGGCAGCAGAGGGATGGTCCACCGCCCCTTGGCTTCTGCTGGTGACTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR GCA 90 bp GGAGGCTTGCATAGCCAAGCAGCCCAAGCAATTGCTGACATCCTTTTGTCCTCTGAGAGCTCCTTCCTCTaGCCGGGGAAGGCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: GGLHSQAAQAIADILLSSESSFL*PGKARR
Trigger: CCTCCTGGCCTTCCCCGGGCAGAGGAAGGAGCTCTC...AGAGGACAAAAGGATGTCAGCAATTGCTTGGGCTGCTTGGCTATGCAAGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR GCA 90 bp GCTTGCATAGCCAAGCAGCCCAAGCAATTGCTGACATCCTTTTGTCCTCTGCCCGGGATTGTGGCTGGCTaGGGTTGGGGTGTAGCGGGT +
Preference number: 4 (lower is better)
Translates to: ACIAKQPKQLLTSFCPLPGIVAG*GWGVAG
Trigger: ACCCGCTACACCCCAACCGCAGCCAGCCACAATCCC...GGGCAGAGGACAAAAGGATGTCAGCAATTGCTTGGGCTGCTTGGCTATGCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR CCA 90 bp AAGATCTCATTGCCTTGCCGGGTTTCGAACTCAAAGTTGCCCTCTCCAGAGACGCGCGGGGATTGTGGCTaGCTGCGGTTGGGGTGTAGC +
Preference number: 4 (lower is better)
Translates to: KISLPCRVSNSKLPSPETRGDCG*LRLGCS
Trigger: GCTACACCCCAACCGCAGCCAGCCACAATCCCCGCG...CGTCTCTGGAGAGGGCAACTTTGAGTTCGAAACCCGGCAAGGCAATGAGATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517422.5
CDS-3UTR CCA 90 bp GCCCAAGCAATTGCTGACATCCTTTTGTCCTCTGCCCTAAATGCCCCAGGTTCCGAAGCCAAGGGGCGGTaGACCATCCCTCTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: AQAIADILLSSALNAPGSEAKGR*TIPLLP
Trigger: AGGCAGCAGAGGGATGGTCCACCGCCCCTTGGCTTC...GGAACCTGGGGCATTTAGGGCAGAGGACAAAAGGATGTCAGCAATTGCTTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR TCA 90 bp GAAGTGGCCATCAGCAGGCAGGAGGCTTGCATAGCCAAGCAGCCCAAGCAATTGCTGCCAAGATGCCCCTaGAGTTCTTCCCCAAGGAAC +
Preference number: 4 (lower is better)
Translates to: EVAISRQEACIAKQPKQLLPRCP*SSSPRN
Trigger: GTTCCTTGGGGAAGAACTTCAGGGGCATCTTGGCAG...CAATTGCTTGGGCTGCTTGGCTATGCAAGCCTCCTGCCTGCTGATGGCCACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR TCA 90 bp GGGTGGTTCTCTCCAGGGCACCCTTCCTGCTTTGGGATGGTGACTCACCCAGCAAGCCCAAGCAATTGCTaGCATCCTTTTGTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: GWFSPGHPSCFGMVTHPASPSNC*HPFVLC
Trigger: GCAGAGGACAAAAGGATGTCAGCAATTGCTTGGGCT...TGCTGGGTGAGTCACCATCCCAAAGCAGGAAGGGTGCCCTGGAGAGAACCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR GCA 90 bp GGGTGGTTCTCTCCAGGGCACCCTTCCTGCTTTGGGATGGTGACTCACCCAGCAATTCATTTTCCTCCATaGAGGGCCGGCTCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: GWFSPGHPSCFGMVTHPAIHFPP*RAGSAF
Trigger: GAAAGCAGAGCCGGCCCTGCATGGAGGAAAATGAAT...TGCTGGGTGAGTCACCATCCCAAAGCAGGAAGGGTGCCCTGGAGAGAACCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR GCA 90 bp GCAGAGATGGCCTCTTCCAGGGCCAAGAAGATCTCATTGCCTTGCCGGGTTTCGGACGCAGCGACGGCCTaGCTCAAAGGAAAAGGTTAC +
Preference number: 4 (lower is better)
Translates to: AEMASSRAKKISLPCRVSDAATA*LKGKGY
Trigger: GTAACCTTTTCCTTTGAGGCAGGCCGTCGCTGCGTC...CGAAACCCGGCAAGGCAATGAGATCTTCTTGGCCCTGGAAGAGGCCATCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517422.5
CDS-3UTR TCA 90 bp GGCTTGCATAGCCAAGCAGCCCAAGCAATTGCTGACATCCTTTTGTCCTCTGCCTGTGGGGGCCGACTGTaGCTGCGCTGCTGTACAATT +
Preference number: 4 (lower is better)
Translates to: GLHSQAAQAIADILLSSACGGRL*LRCCTI
Trigger: AATTGTACAGCAGCGCAGTCACAGTCGGCCCCCACA...GGCAGAGGACAAAAGGATGTCAGCAATTGCTTGGGCTGCTTGGCTATGCAAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR TCA 90 bp GCAGGAGGCTTGCATAGCCAAGCAGCCCAAGCAATTGCTGACATCCTTTTGTCCCAGAGGAGGTTCTTCTaGTGCAGTGGCCAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: AGGLHSQAAQAIADILLSQRRFF*CSGQEE
Trigger: CTCCTCCTGGCCACTGCATCAGAAGAACCTCCTCTG...GGACAAAAGGATGTCAGCAATTGCTTGGGCTGCTTGGCTATGCAAGCCTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR TCA 90 bp GAAGTGGCCATCAGCAGGCAGGAGGCTTGCATAGCCAAGCAGCCCAAGCAATTGTGCCACCAAGAAATCTaGAAGGTGCAGGAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: EVAISRQEACIAKQPKQLCHQEI*KVQEAA
Trigger: GGCAGCTTCCTGCACCTTTCAGATTTCTTGGTGGCA...CAATTGCTTGGGCTGCTTGGCTATGCAAGCCTCCTGCCTGCTGATGGCCACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR GCA 90 bp GCAGGAGGCTTGCATAGCCAAGCAGCCCAAGCAATTGCTGACATCCTTTTGTCCGAAGCAGAGAAATCCTaGCCGGCTGGCTGGACATGC +
Preference number: 4 (lower is better)
Translates to: AGGLHSQAAQAIADILLSEAEKS*PAGWTC
Trigger: GCATGTCCAGCCAGCCGGGCAGGATTTCTCTGCTTC...GGACAAAAGGATGTCAGCAATTGCTTGGGCTGCTTGGCTATGCAAGCCTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR GCA 90 bp GCAGGAGGCTTGCATAGCCAAGCAGCCCAAGCAATTGCTGACATCCTTTTGTCCAGCAGGCAGGAGGCTTaGATAGCCAAGCAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: AGGLHSQAAQAIADILLSSRQEA*IAKQPK
Trigger: CTTGGGCTGCTTGGCTATGCAAGCCTCCTGCCTGCT...GGACAAAAGGATGTCAGCAATTGCTTGGGCTGCTTGGCTATGCAAGCCTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR CCA 90 bp GCCCAAGCAATTGCTGACATCCTTTTGTCCTCTGCCCTAAATGCCCCAGGTTCCGGTACAGGCGCTCCTTaGTCTCCAGGAAGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: AQAIADILLSSALNAPGSGTGAP*SPGRRH
Trigger: GTGCCTTCTTCCTGGAGACCAAGGAGCGCCTGTACC...GGAACCTGGGGCATTTAGGGCAGAGGACAAAAGGATGTCAGCAATTGCTTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR CCA 90 bp GCTTGCATAGCCAAGCAGCCCAAGCAATTGCTGACATCCTTTTGTCCTCTGCCCGCACCCTTCCTGCTTTaGGATGGTGACTCACCCAGC +
Preference number: 4 (lower is better)
Translates to: ACIAKQPKQLLTSFCPLPAPFLL*DGDSPS
Trigger: GCTGGGTGAGTCACCATCCCAAAGCAGGAAGGGTGC...GGGCAGAGGACAAAAGGATGTCAGCAATTGCTTGGGCTGCTTGGCTATGCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR GCA 90 bp GCCCAAGCAATTGCTGACATCCTTTTGTCCTCTGCCCTAAATGCCCCAGGTTCCGAAGCCTTGTTTCACTaGCCCGTCTCCCATCCTCTG +
Preference number: 4 (lower is better)
Translates to: AQAIADILLSSALNAPGSEALFH*PVSHPL
Trigger: CAGAGGATGGGAGACGGGGCAGTGAAACAAGGCTTC...GGAACCTGGGGCATTTAGGGCAGAGGACAAAAGGATGTCAGCAATTGCTTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR GCA 90 bp GCAGGAGGCTTGCATAGCCAAGCAGCCCAAGCAATTGCTGACATCCTTTTGTCCTTGGGGTGTAGCGGGTaGAGCATTCTTCTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: AGGLHSQAAQAIADILLSLGCSG*SILLGR
Trigger: TCTGCCCAGAAGAATGCTGCACCCGCTACACCCCAA...GGACAAAAGGATGTCAGCAATTGCTTGGGCTGCTTGGCTATGCAAGCCTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR GCA 90 bp GGAGGCTTGCATAGCCAAGCAGCCCAAGCAATTGCTGACATCCTTTTGTCCTCTGCAGGGTCTCCTCAATaGTGTCGTACAGAGGGTCGG +
Preference number: 4 (lower is better)
Translates to: GGLHSQAAQAIADILLSSAGSPQ*CRTEGR
Trigger: CCGACCCTCTGTACGACAGCATTGAGGAGACCCTGC...AGAGGACAAAAGGATGTCAGCAATTGCTTGGGCTGCTTGGCTATGCAAGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR GCA 90 bp GGAGGCTTGCATAGCCAAGCAGCCCAAGCAATTGCTGACATCCTTTTGTCCTCTGGTGGACCATCCCTCTaGTGCCTCTGTCACTTTGGG +
Preference number: 4 (lower is better)
Translates to: GGLHSQAAQAIADILLSSGGPSL*CLCHFG
Trigger: CCCAAAGTGACAGAGGCAGCAGAGGGATGGTCCACC...AGAGGACAAAAGGATGTCAGCAATTGCTTGGGCTGCTTGGCTATGCAAGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR CCA 90 bp GGCTTGCATAGCCAAGCAGCCCAAGCAATTGCTGACATCCTTTTGTCCTCTGCCACAGCAAATTCCTTGTaGGGGCCGACTGTGACTGCG +
Preference number: 4 (lower is better)
Translates to: GLHSQAAQAIADILLSSATANSL*GPTVTA
Trigger: CGCAGTCACAGTCGGCCCCCACAAGGAATTTGCTGT...GGCAGAGGACAAAAGGATGTCAGCAATTGCTTGGGCTGCTTGGCTATGCAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR CCA 90 bp GCTTGCATAGCCAAGCAGCCCAAGCAATTGCTGACATCCTTTTGTCCTCTGCCCGGTGCAGCATTCTTCTaGGCAGAGATGGCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: ACIAKQPKQLLTSFCPLPGAAFF*AEMASS
Trigger: GGAAGAGGCCATCTCTGCCCAGAAGAATGCTGCACC...GGGCAGAGGACAAAAGGATGTCAGCAATTGCTTGGGCTGCTTGGCTATGCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR CCA 90 bp AGATCTCATTGCCTTGCCGGGTTTCGAACTCAAAGTTGCCCTCTCCAGAGACGCGGTGCAGCATTCTTCTaGGCAGAGATGGCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: RSHCLAGFRTQSCPLQRRGAAFF*AEMASS
Trigger: GGAAGAGGCCATCTCTGCCCAGAAGAATGCTGCACC...GCGTCTCTGGAGAGGGCAACTTTGAGTTCGAAACCCGGCAAGGCAATGAGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517422.5
CDS-3UTR CCA 90 bp GCCCAAGCAATTGCTGACATCCTTTTGTCCTCTGCCCTAAATGCCCCAGGTTCCGTTCTTCTGATGCAGTaGCCAGGAGGAGTCACCAGC +
Preference number: 4 (lower is better)
Translates to: AQAIADILLSSALNAPGSVLLMQ*PGGVTS
Trigger: GCTGGTGACTCCTCCTGGCCACTGCATCAGAAGAAC...GGAACCTGGGGCATTTAGGGCAGAGGACAAAAGGATGTCAGCAATTGCTTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276420.9
3UTR CAA 72 bp GATGGCCTCTTCCAGGGCCAAGAAGATCTCATTGCCTaGCCGGGTTTCGAACTCAAAGTTGCCCTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: DGLFQGQEDLIA*PGFELKVALSR
Trigger: TCTGGAGAGGGCAACTTTGAGTTCGAAACCCGGCAAGGCAATGAGATCTTCTTGGCCCTGGAAGAGGCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517422.5
CDS-3UTR GCA 90 bp GGCTTGCATAGCCAAGCAGCCCAAGCAATTGCTGACATCCTTTTGTCCTCTGCCGGGGCCGACTGTGACTaGGCTGCTGTACAATTCATT +
Preference number: 4 (lower is better)
Translates to: GLHSQAAQAIADILLSSAGADCD*AAVQFI
Trigger: AATGAATTGTACAGCAGCGCAGTCACAGTCGGCCCC...GGCAGAGGACAAAAGGATGTCAGCAATTGCTTGGGCTGCTTGGCTATGCAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR CCA 90 bp GCCCAAGCAATTGCTGACATCCTTTTGTCCTCTGCCCTAAATGCCCCAGGTTCCGTCATACTCAGTTCCTaGCTGCCAGCCAGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: AQAIADILLSSALNAPGSVILSS*LPARSR
Trigger: TCTGCTTCTGGCTGGCAGCCAGGAACTGAGTATGAC...GGAACCTGGGGCATTTAGGGCAGAGGACAAAAGGATGTCAGCAATTGCTTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR GCA 90 bp GGCTTGCATAGCCAAGCAGCCCAAGCAATTGCTGACATCCTTTTGTCCTCTGCCTTTCGAACTCAAAGTTaGCCTCTCCAGAGACGCAGC +
Preference number: 4 (lower is better)
Translates to: GLHSQAAQAIADILLSSAFRTQS*PLQRRS
Trigger: GCTGCGTCTCTGGAGAGGGCAACTTTGAGTTCGAAA...GGCAGAGGACAAAAGGATGTCAGCAATTGCTTGGGCTGCTTGGCTATGCAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR GCA 90 bp GAGATGGCCTCTTCCAGGGCCAAGAAGATCTCATTGCCTTGCCGGGTTTCGAACCCAAGAAGATCTCATTaGCTTGCCGGGTTTCGAACT +
Preference number: 4 (lower is better)
Translates to: EMASSRAKKISLPCRVSNPRRSH*LAGFRT
Trigger: AGTTCGAAACCCGGCAAGGCAATGAGATCTTCTTGG...GTTCGAAACCCGGCAAGGCAATGAGATCTTCTTGGCCCTGGAAGAGGCCATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517422.5
CDS-3UTR GCA 90 bp GGCTTGCATAGCCAAGCAGCCCAAGCAATTGCTGACATCCTTTTGTCCTCTGCCTACTCAGTTCCTGGCTaGCAGCCAGAAGCAGAGAAA +
Preference number: 4 (lower is better)
Translates to: GLHSQAAQAIADILLSSAYSVPG*QPEAEK
Trigger: TTTCTCTGCTTCTGGCTGGCAGCCAGGAACTGAGTA...GGCAGAGGACAAAAGGATGTCAGCAATTGCTTGGGCTGCTTGGCTATGCAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR GCA 90 bp GCCCAAGCAATTGCTGACATCCTTTTGTCCTCTGCCCTAAATGCCCCAGGTTCCCATCCTTTTGTCCTCTaGCCTAAATGCCCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: AQAIADILLSSALNAPGSHPFVL*PKCPRF
Trigger: GAACCTGGGGCATTTAGGGCAGAGGACAAAAGGATG...GGAACCTGGGGCATTTAGGGCAGAGGACAAAAGGATGTCAGCAATTGCTTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR GCA 90 bp GGAGGCTTGCATAGCCAAGCAGCCCAAGCAATTGCTGACATCCTTTTGTCCTCTCCAAGAAGATCTCATTaGCTTGCCGGGTTTCGAACT +
Preference number: 4 (lower is better)
Translates to: GGLHSQAAQAIADILLSSPRRSH*LAGFRT
Trigger: AGTTCGAAACCCGGCAAGGCAATGAGATCTTCTTGG...AGAGGACAAAAGGATGTCAGCAATTGCTTGGGCTGCTTGGCTATGCAAGCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS GCA 90 bp GAAGGCCAGGAGGCAGATGGCCTGCACCCAGTCGCCGCGCTCCGCTaGAGGGGCCGCCAGGAGGTACAGGCGCTCCTTGGTCTCCAGGAA +
Preference number: 5 (lower is better)
Translates to: EGQEADGLHPVAALR*RGRQEVQALLGLQE
Trigger: TTCCTGGAGACCAAGGAGCGCCTGTACCTCCTGGCGGCCCCTGCAGCGGAGCGCGGCGACTGGGTGCAGGCCATCTGCCTCCTGGCCTTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276420.9
ENST00000517422.5
ENST00000523932.1
ENST00000524001.1
CDS GCA 90 bp CTGGAGGCCAGCAGGGTCCCTGTCAGCTGTCGCCTGCCTCCTCCATaGCTCACCCCGGGGCTCCTGCGGGCTGTCATAGAGGGACAGGGC +
Preference number: 5 (lower is better)
Translates to: LEASRVPVSCRLPPP*LTPGLLRAVIEGQG
Trigger: GCCCTGTCCCTCTATGACAGCCCGCAGGAGCCCCGGGGTGAGGCATGGAGGAGGCAGGCGACAGCTGACAGGGACCCTGCTGGCCTCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS TCA 90 bp CTGCAGCTCCAGCCGGGCCAAGGCGCAGTCCGACCCTCCATACAGTaGGGCGCCGAAGCGGCGCCATTTCTGTGCCAGAGGCGTGGGAGG +
Preference number: 5 (lower is better)
Translates to: LQLQPGQGAVRPSIQ*GAEAAPFLCQRRGR
Trigger: CCTCCCACGCCTCTGGCACAGAAATGGCGCCGCTTCGGCGCCTCACTGTATGGAGGGTCGGACTGCGCCTTGGCCCGGCTGGAGCTGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524001.1
CDS GCA 90 bp ACCTTCCGGGCAGCCTCACACCGACGAGGCTTCTCCGGGCCCTCCTaGAGCTCCAGCCGGGCCAAGGCGCAGTCCGACCCTCCATACAGT +
Preference number: 5 (lower is better)
Translates to: TFRAASHRRGFSGPS*SSSRAKAQSDPPYS
Trigger: ACTGTATGGAGGGTCGGACTGCGCCTTGGCCCGGCTGGAGCTGCAGGAGGGCCCGGAGAAGCCTCGTCGGTGTGAGGCTGCCCGGAAGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276420.9
ENST00000517422.5
ENST00000523932.1
ENST00000524001.1
CDS-3UTR CAA 90 bp AAACCTGTAGGGCCAGTCGTACAGCTGGGTCCCTGGCTCGGGCCCACCCCACAGTGTGGCTGGCTGCGGTaGGGGTGTAGCGGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: KPVGPVVQLGPWLGPTPQCGWLR*GCSGCS
Trigger: GCTGCACCCGCTACACCCCAACCGCAGCCAGCCACA...CTGTGGGGTGGGCCCGAGCCAGGGACCCAGCTGTACGACTGGCCCTACAGGTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517422.5
CDS GCA 90 bp GGCTGCCAGCCAGAAGCAGAGAAATCCTGCCCGGCTGGCTGGACATaGTGGAGGCCAGCAGGGTCCCTGTCAGCTGTCGCCTGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: GCQPEAEKSCPAGWT*WRPAGSLSAVACLL
Trigger: GAGGAGGCAGGCGACAGCTGACAGGGACCCTGCTGGCCTCCAGCATGTCCAGCCAGCCGGGCAGGATTTCTCTGCTTCTGGCTGGCAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR CAA 90 bp CCTGGCCCCGAGGCCGTGGAGCAGGCACCGGTGTGGTGGGTGAAGGCGGCGGCAGCCAAGAAGATCTCATaGCCTTGCCGGGTTTCGAAC +
Preference number: 5 (lower is better)
Translates to: PGPEAVEQAPVWWVKAAAAKKIS*PCRVSN
Trigger: GTTCGAAACCCGGCAAGGCAATGAGATCTTCTTGGC...TGCCGCCGCCTTCACCCACCACACCGGTGCCTGCTCCACGGCCTCGGGGCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517422.5
CDS-3UTR CAA 90 bp GGGTGGTTCTCTCCAGGGCACCCTTCCTGCTTTGGGATGGTGACTCACCCAGCAGCAGCGACGCGGGGATaGTGGCTGGCTGCGGTTGGG +
Preference number: 5 (lower is better)
Translates to: GWFSPGHPSCFGMVTHPAAATRG*WLAAVG
Trigger: CCCAACCGCAGCCAGCCACAATCCCCGCGTCGCTGC...TGCTGGGTGAGTCACCATCCCAAAGCAGGAAGGGTGCCCTGGAGAGAACCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS TCA 90 bp ACAGAGGGTCGGCCAGGAGCTGAGGAGGGACTGCCAAGATGCCCCTaGAGTTCTTCCCCAAGGAACGGGCCACCGCATCGAAGGGCACGG +
Preference number: 5 (lower is better)
Translates to: TEGRPGAEEGLPRCP*SSSPRNGPPHRRAR
Trigger: CCGTGCCCTTCGATGCGGTGGCCCGTTCCTTGGGGAAGAACTTCAGGGGCATCTTGGCAGTCCCTCCTCAGCTCCTGGCCGACCCTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276420.9
ENST00000524001.1
CDS-3UTR CAA 90 bp GGGCACCCTTCCTGCTTTGGGATGGTGACTCACCCAGCAGGCCCTGGGAGAGGCAAGGAAAAGGTTACCTaGTCCCGCCCAAAGCGCCGC +
Preference number: 5 (lower is better)
Translates to: GHPSCFGMVTHPAGPGRGKEKVT*SRPKRR
Trigger: GCGGCGCTTTGGGCGGGACAAGGTAACCTTTTCCTT...GCCTCTCCCAGGGCCTGCTGGGTGAGTCACCATCCCAAAGCAGGAAGGGTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS GCA 90 bp CTCAATGCTGTCGTACAGAGGGTCGGCCAGGAGCTGAGGAGGGACTaGCAAGATGCCCCTGAAGTTCTTCCCCAAGGAACGGGCCACCGC +
Preference number: 5 (lower is better)
Translates to: LNAVVQRVGQELRRD*QDAPEVLPQGTGHR
Trigger: GCGGTGGCCCGTTCCTTGGGGAAGAACTTCAGGGGCATCTTGGCAGTCCCTCCTCAGCTCCTGGCCGACCCTCTGTACGACAGCATTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276420.9
ENST00000524001.1
CDS-3UTR CAA 90 bp TGTCCCGCCCAAAGCGCCGCAGAAACCTGTAGGGCCAGTCGTACAGCTGGGTCCAGGTACAGGCGCTCCTaGGTCTCCAGGAAGAAGGCA +
Preference number: 5 (lower is better)
Translates to: CPAQSAAETCRASRTAGSRYRRS*VSRKKA
Trigger: TGCCTTCTTCCTGGAGACCAAGGAGCGCCTGTACCT...GGACCCAGCTGTACGACTGGCCCTACAGGTTTCTGCGGCGCTTTGGGCGGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517422.5
CDS-3UTR CAA 90 bp TGGCTGCGGTTGGGGTGTAGCGGGTGCAGCATTCTTCTGGGCAGAGATGGCCTCGTCACAGCAAATTCCTaGTGGGGGCCGAGGGGAAGG +
Preference number: 5 (lower is better)
Translates to: WLRLGCSGCSILLGRDGLVTANS*WGPRGR
Trigger: CCTTCCCCTCGGCCCCCACAAGGAATTTGCTGTGAC...GAGGCCATCTCTGCCCAGAAGAATGCTGCACCCGCTACACCCCAACCGCAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000517422.5
CDS GCA 90 bp GCTCATCGTATATGTGGTCAGGTCGAGGGGGCAGGGTCTCCTCAATaGTGTCGTACAGAGGGTCGGCCAGGAGCTGAGGAGGGACTGCCA +
Preference number: 5 (lower is better)
Translates to: AHRICGQVEGAGSPQ*CRTEGRPGAEEGLP
Trigger: TGGCAGTCCCTCCTCAGCTCCTGGCCGACCCTCTGTACGACAGCATTGAGGAGACCCTGCCCCCTCGACCTGACCACATATACGATGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276420.9
ENST00000524001.1
CDS-3UTR CAA 90 bp GCCGCAGAAACCTGTAGGGCCAGTCGTACAGCTGGGTCCCTGGCTCGGGCCCACAAGATACAAGAAGCCTaGTTTCACTGCCCCGTCTCC +
Preference number: 5 (lower is better)
Translates to: AAETCRASRTAGSLARAHKIQEA*FHCPVS
Trigger: GGAGACGGGGCAGTGAAACAAGGCTTCTTGTATCTT...GTGGGCCCGAGCCAGGGACCCAGCTGTACGACTGGCCCTACAGGTTTCTGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517422.5
CDS TCA 90 bp GGCAGGGTCTCCTCAATGCTGTCGTACAGAGGGTCGGCCAGGAGCTaGGGAGGGACTGCCAAGATGCCCCTGAAGTTCTTCCCCAAGGAA +
Preference number: 5 (lower is better)
Translates to: GRVSSMLSYRGSARS*GGTAKMPLKFFPKE
Trigger: TTCCTTGGGGAAGAACTTCAGGGGCATCTTGGCAGTCCCTCCTCAGCTCCTGGCCGACCCTCTGTACGACAGCATTGAGGAGACCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276420.9
ENST00000524001.1
CDS GCA 90 bp GGGCCAAGAAGATCTCATTGCCTTGCCGGGTTTCGAACTCAAAGTTaGCCTCTCCAGAGACGCAGCGACGGCCTTGTCCCGCCCAAAGCG +
Preference number: 5 (lower is better)
Translates to: GPRRSHCLAGFRTQS*PLQRRSDGLVPPKA
Trigger: CGCTTTGGGCGGGACAAGGCCGTCGCTGCGTCTCTGGAGAGGGCAACTTTGAGTTCGAAACCCGGCAAGGCAATGAGATCTTCTTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523932.1
CDS-3UTR CAA 90 bp GCAGGAGGCTTGCATAGCCAAGCAGCCCAAGCAATTGCTGACATCCTTTTGTCCTGTGGCTGGCTGCGGTaGGGGTGTAGCGGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: AGGLHSQAAQAIADILLSCGWLR*GCSGCS
Trigger: GCTGCACCCGCTACACCCCAACCGCAGCCAGCCACA...GGACAAAAGGATGTCAGCAATTGCTTGGGCTGCTTGGCTATGCAAGCCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR CAA 90 bp GGGTGGTTCTCTCCAGGGCACCCTTCCTGCTTTGGGATGGTGACTCACCCAGCAGTCACAGCAAATTCCTaGTGGGGGCCGACTGTGACT +
Preference number: 5 (lower is better)
Translates to: GWFSPGHPSCFGMVTHPAVTANS*WGPTVT
Trigger: AGTCACAGTCGGCCCCCACAAGGAATTTGCTGTGAC...TGCTGGGTGAGTCACCATCCCAAAGCAGGAAGGGTGCCCTGGAGAGAACCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR CAA 90 bp TGGCTGCGGTTGGGGTGTAGCGGGTGCAGCATTCTTCTGGGCAGAGATGGCCTCGTTTCGAACTCAAAGTaGCCCTCTCCAGAGACGCAG +
Preference number: 5 (lower is better)
Translates to: WLRLGCSGCSILLGRDGLVSNSK*PSPETQ
Trigger: CTGCGTCTCTGGAGAGGGCAACTTTGAGTTCGAAAC...GAGGCCATCTCTGCCCAGAAGAATGCTGCACCCGCTACACCCCAACCGCAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517422.5
CDS-3UTR CAA 90 bp TCTTCCAGGGCCAAGAAGATCTCATTGCCTTGCCGGGTTTCGAACTCAAAGTTGGCAGCGACGCGGGGATaGTGGCTGGCTGCGGTTGGG +
Preference number: 5 (lower is better)
Translates to: SSRAKKISLPCRVSNSKLAATRG*WLAAVG
Trigger: CCCAACCGCAGCCAGCCACAATCCCCGCGTCGCTGC...CAACTTTGAGTTCGAAACCCGGCAAGGCAATGAGATCTTCTTGGCCCTGGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517422.5
CDS-3UTR CAA 90 bp GAAGTGGCCATCAGCAGGCAGGAGGCTTGCATAGCCAAGCAGCCCAAGCAATTGAGGTACAGGCGCTCCTaGGTCTCCAGGAAGAAGGCA +
Preference number: 5 (lower is better)
Translates to: EVAISRQEACIAKQPKQLRYRRS*VSRKKA
Trigger: TGCCTTCTTCCTGGAGACCAAGGAGCGCCTGTACCT...CAATTGCTTGGGCTGCTTGGCTATGCAAGCCTCCTGCCTGCTGATGGCCACTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR CAA 90 bp GGGGATTGTGGCTGGCTGCGGTTGGGGTGTAGCGGGTGCAGCATTCTTCTGGGCGAAGATCTCATTGCCTaGCCGGGTTTCGAACTCAAA +
Preference number: 5 (lower is better)
Translates to: GDCGWLRLGCSGCSILLGEDLIA*PGFELK
Trigger: TTTGAGTTCGAAACCCGGCAAGGCAATGAGATCTTC...GCCCAGAAGAATGCTGCACCCGCTACACCCCAACCGCAGCCAGCCACAATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517422.5
CDS-3UTR CAA 90 bp GGGTGGTTCTCTCCAGGGCACCCTTCCTGCTTTGGGATGGTGACTCACCCAGCAGAAGATCTCATTGCCTaGCCGGGTTTCGAACTCAAA +
Preference number: 5 (lower is better)
Translates to: GWFSPGHPSCFGMVTHPAEDLIA*PGFELK
Trigger: TTTGAGTTCGAAACCCGGCAAGGCAATGAGATCTTC...TGCTGGGTGAGTCACCATCCCAAAGCAGGAAGGGTGCCCTGGAGAGAACCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR CAA 90 bp GGAGGCTTGCATAGCCAAGCAGCCCAAGCAATTGCTGACATCCTTTTGTCCTCTCAGCAGGCAGGAGGCTaGCATAGCCAAGCAGCCCAA +
Preference number: 5 (lower is better)
Translates to: GGLHSQAAQAIADILLSSQQAGG*HSQAAQ
Trigger: TTGGGCTGCTTGGCTATGCAAGCCTCCTGCCTGCTG...AGAGGACAAAAGGATGTCAGCAATTGCTTGGGCTGCTTGGCTATGCAAGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS GCA 90 bp AGGAGGAGTCACCAGCAGAAGCCAAGGGGCGGTGGACCATCCCTCTaGTGCCTCTGTCACTTTGGGCCTTTCTTTAGTACAACATTGTCA +
Preference number: 5 (lower is better)
Translates to: RRSHQQKPRGGGPSL*CLCHFGPFFSTTLS
Trigger: TGACAATGTTGTACTAAAGAAAGGCCCAAAGTGACAGAGGCAGCAGAGGGATGGTCCACCGCCCCTTGGCTTCTGCTGGTGACTCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS GCA 90 bp AGGAGTCACCAGCAGAAGCCAAGGGGCGGTGGACCATCCCTCTGCTaGCTCTGTCACTTTGGGCCTTTCTTTAGTACAACATTGTCATAC +
Preference number: 5 (lower is better)
Translates to: RSHQQKPRGGGPSLC*LCHFGPFFSTTLSY
Trigger: GTATGACAATGTTGTACTAAAGAAAGGCCCAAAGTGACAGAGGCAGCAGAGGGATGGTCCACCGCCCCTTGGCTTCTGCTGGTGACTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR CAA 90 bp TCTTCCAGGGCCAAGAAGATCTCATTGCCTTGCCGGGTTTCGAACTCAAAGTTGAAGGAAAAGGTTACCTaGTCCCGCCCAAAGCGCCGC +
Preference number: 5 (lower is better)
Translates to: SSRAKKISLPCRVSNSKLKEKVT*SRPKRR
Trigger: GCGGCGCTTTGGGCGGGACAAGGTAACCTTTTCCTT...CAACTTTGAGTTCGAAACCCGGCAAGGCAATGAGATCTTCTTGGCCCTGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517422.5
CDS-3UTR CAA 90 bp GCAGGAGGCTTGCATAGCCAAGCAGCCCAAGCAATTGCTGACATCCTTTTGTCCGCCAAGAAGATCTCATaGCCTTGCCGGGTTTCGAAC +
Preference number: 5 (lower is better)
Translates to: AGGLHSQAAQAIADILLSAKKIS*PCRVSN
Trigger: GTTCGAAACCCGGCAAGGCAATGAGATCTTCTTGGC...GGACAAAAGGATGTCAGCAATTGCTTGGGCTGCTTGGCTATGCAAGCCTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR CAA 90 bp GAAGTGGCCATCAGCAGGCAGGAGGCTTGCATAGCCAAGCAGCCCAAGCAATTGGCTGCCTCTGTCACTTaGGGCCTTTCTTTAGTACAA +
Preference number: 5 (lower is better)
Translates to: EVAISRQEACIAKQPKQLAASVT*GLSLVQ
Trigger: TTGTACTAAAGAAAGGCCCAAAGTGACAGAGGCAGC...CAATTGCTTGGGCTGCTTGGCTATGCAAGCCTCCTGCCTGCTGATGGCCACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR CAA 90 bp GAAGTGGCCATCAGCAGGCAGGAGGCTTGCATAGCCAAGCAGCCCAAGCAATTGAAGCAGCCCAAGCAATaGCTGACATCCTTTTGTCCT +
Preference number: 5 (lower is better)
Translates to: EVAISRQEACIAKQPKQLKQPKQ*LTSFCP
Trigger: AGGACAAAAGGATGTCAGCAATTGCTTGGGCTGCTT...CAATTGCTTGGGCTGCTTGGCTATGCAAGCCTCCTGCCTGCTGATGGCCACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS GCA 90 bp TTTGGGCCTTTCTTTAGTACAACATTGTCATACTCAGTTCCTGGCTaGCAGCCAGAAGCAGAGAAATCCTGCCCGGCTGGCTGGACATGC +
Preference number: 5 (lower is better)
Translates to: FGPFFSTTLSYSVPG*QPEAEKSCPAGWTC
Trigger: GCATGTCCAGCCAGCCGGGCAGGATTTCTCTGCTTCTGGCTGGCAGCCAGGAACTGAGTATGACAATGTTGTACTAAAGAAAGGCCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR CAA 90 bp GGAGGCTTGCATAGCCAAGCAGCCCAAGCAATTGCTGACATCCTTTTGTCCTCTGTTTCGAACTCAAAGTaGCCCTCTCCAGAGACGCAG +
Preference number: 5 (lower is better)
Translates to: GGLHSQAAQAIADILLSSVSNSK*PSPETQ
Trigger: CTGCGTCTCTGGAGAGGGCAACTTTGAGTTCGAAAC...AGAGGACAAAAGGATGTCAGCAATTGCTTGGGCTGCTTGGCTATGCAAGCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS-3UTR CAA 90 bp GGAGGCTTGCATAGCCAAGCAGCCCAAGCAATTGCTGACATCCTTTTGTCCTCTAAGATACAAGAAGCCTaGTTTCACTGCCCCGTCTCC +
Preference number: 5 (lower is better)
Translates to: GGLHSQAAQAIADILLSSKIQEA*FHCPVS
Trigger: GGAGACGGGGCAGTGAAACAAGGCTTCTTGTATCTT...AGAGGACAAAAGGATGTCAGCAATTGCTTGGGCTGCTTGGCTATGCAAGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS TCA 90 bp TTAATGGGAAACAGCTGGCCTGCCTCACCACTGCCCAGTTCTAAATaGGCGTACCAGAACTTTTCTAGAAAGTATTATCCACACACTTAT +
Preference number: 5 (lower is better)
Translates to: LMGNSWPASPLPSSK*AYQNFSRKYYPHTY
Trigger: ATAAGTGTGTGGATAATACTTTCTAGAAAAGTTCTGGTACGCTCATTTAGAACTGGGCAGTGGTGAGGCAGGCCAGCTGTTTCCCATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522011.1
CDS GCA 72 bp GCAGCCTCACACCGACGAGGCTTCTCCGGGCCCTCCTaGAGCTCCAGCCGGGCCAAGGCGCAGTCCGACCCT +
Preference number: 6 (lower is better)
Translates to: AASHRRGFSGPS*SSSRAKAQSDP
Trigger: AGGGTCGGACTGCGCCTTGGCCCGGCTGGAGCTGCAGGAGGGCCCGGAGAAGCCTCGTCGGTGTGAGGCTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276420.9
ENST00000517422.5
ENST00000523932.1
ENST00000524001.1
CDS GCA 72 bp GAGGCAGATGGCCTGCACCCAGTCGCCGCGCTCCGCTaGAGGGGCCGCCAGGAGGTACAGGCGCTCCTTGGT +
Preference number: 6 (lower is better)
Translates to: EADGLHPVAALR*RGRQEVQALLG
Trigger: ACCAAGGAGCGCCTGTACCTCCTGGCGGCCCCTGCAGCGGAGCGCGGCGACTGGGTGCAGGCCATCTGCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276420.9
ENST00000517422.5
ENST00000523932.1
ENST00000524001.1
CDS CAA 72 bp TCCGCTGCAGGGGCCGCCAGGAGGTACAGGCGCTCCTaGGTCTCCAGGAAGAAGGCACTGGTGTCCCGGGGG +
Preference number: 6 (lower is better)
Translates to: SAAGAARRYRRS*VSRKKALVSRG
Trigger: CCCCCGGGACACCAGTGCCTTCTTCCTGGAGACCAAGGAGCGCCTGTACCTCCTGGCGGCCCCTGCAGCGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276420.9
ENST00000517422.5
ENST00000523932.1
ENST00000524001.1
CDS TCA 72 bp CAGCCGGGCCAAGGCGCAGTCCGACCCTCCATACAGTaGGGCGCCGAAGCGGCGCCATTTCTGTGCCAGAGG +
Preference number: 6 (lower is better)
Translates to: QPGQGAVRPSIQ*GAEAAPFLCQR
Trigger: CCTCTGGCACAGAAATGGCGCCGCTTCGGCGCCTCACTGTATGGAGGGTCGGACTGCGCCTTGGCCCGGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524001.1
CDS TCA 72 bp CAGCCGGGCCAAGGCGCAGTCCGACCCTCCATACAGTaGGGCGCCGAAGCGGCGCCATTTCTTTCCAAACGT +
Preference number: 6 (lower is better)
Translates to: QPGQGAVRPSIQ*GAEAAPFLSKR
Trigger: ACGTTTGGAAAGAAATGGCGCCGCTTCGGCGCCTCACTGTATGGAGGGTCGGACTGCGCCTTGGCCCGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276420.9
ENST00000517422.5
ENST00000523932.1
CDS CCA 72 bp GACAGGGCAGCCACTCCCTCGGGCTCATCGTATATGTaGTCAGGTCGAGGGGGCAGGGTCTCCTCAATGCTG +
Preference number: 6 (lower is better)
Translates to: DRAATPSGSSYM*SGRGGRVSSML
Trigger: CAGCATTGAGGAGACCCTGCCCCCTCGACCTGACCACATATACGATGAGCCCGAGGGAGTGGCTGCCCTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276420.9
ENST00000524001.1
CDS GCA 72 bp GTCGTACAGAGGGTCGGCCAGGAGCTGAGGAGGGACTaGCAAGATGCCCCTGAAGTTCTTCCCCAAGGAACG +
Preference number: 6 (lower is better)
Translates to: VVQRVGQELRRD*QDAPEVLPQGT
Trigger: CGTTCCTTGGGGAAGAACTTCAGGGGCATCTTGGCAGTCCCTCCTCAGCTCCTGGCCGACCCTCTGTACGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276420.9
ENST00000524001.1
CDS GCA 72 bp ATATGTGGTCAGGTCGAGGGGGCAGGGTCTCCTCAATaGTGTCGTACAGAGGGTCGGCCAGGAGCTGAGGAG +
Preference number: 6 (lower is better)
Translates to: ICGQVEGAGSPQ*CRTEGRPGAEE
Trigger: CTCCTCAGCTCCTGGCCGACCCTCTGTACGACAGCATTGAGGAGACCCTGCCCCCTCGACCTGACCACATAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276420.9
ENST00000524001.1
CDS CAA 90 bp AGGGCCAAGAAGATCTCATTGCCTTGCCGGGTTTCGAACTCAAAGTaGCCCTCTCCAGAGACGCAGCGACGGCCTTGTCCCGCCCAAAGC +
Preference number: 6 (lower is better)
Translates to: RAKKISLPCRVSNSK*PSPETQRRPCPAQS
Trigger: GCTTTGGGCGGGACAAGGCCGTCGCTGCGTCTCTGGAGAGGGCAACTTTGAGTTCGAAACCCGGCAAGGCAATGAGATCTTCTTGGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523932.1
CDS TCA 72 bp TCCTCAATGCTGTCGTACAGAGGGTCGGCCAGGAGCTaGGGAGGGACTGCCAAGATGCCCCTGAAGTTCTTC +
Preference number: 6 (lower is better)
Translates to: SSMLSYRGSARS*GGTAKMPLKFF
Trigger: GAAGAACTTCAGGGGCATCTTGGCAGTCCCTCCTCAGCTCCTGGCCGACCCTCTGTACGACAGCATTGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276420.9
ENST00000524001.1
CDS GCA 72 bp AGATCTCATTGCCTTGCCGGGTTTCGAACTCAAAGTTaGCCTCTCCAGAGACGCAGCGACGGCCTTGTCCCG +
Preference number: 6 (lower is better)
Translates to: RSHCLAGFRTQS*PLQRRSDGLVP
Trigger: CGGGACAAGGCCGTCGCTGCGTCTCTGGAGAGGGCAACTTTGAGTTCGAAACCCGGCAAGGCAATGAGATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523932.1
CDS CAA 90 bp GGCCGACTTTCCAAACGTCTGCTGCTGCTGAAGATACAAGAAGCCTaGTTTCACTGCCCCGTCTCCCATCCTCTGACCATCTCGGAGCCC +
Preference number: 6 (lower is better)
Translates to: GRLSKRLLLLKIQEA*FHCPVSHPLTISEP
Trigger: GGGCTCCGAGATGGTCAGAGGATGGGAGACGGGGCAGTGAAACAAGGCTTCTTGTATCTTCAGCAGCAGCAGACGTTTGGAAAGTCGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518197.1
CDS GCA 72 bp CACCAGCAGAAGCCAAGGGGCGGTGGACCATCCCTCTaGTGCCTCTGTCACTTTGGGCCTTTCTTTAGTACA +
Preference number: 6 (lower is better)
Translates to: HQQKPRGGGPSL*CLCHFGPFFST
Trigger: TGTACTAAAGAAAGGCCCAAAGTGACAGAGGCAGCAGAGGGATGGTCCACCGCCCCTTGGCTTCTGCTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS CAA 72 bp AAGATCTCATTGCCTTGCCGGGTTTCGAACTCAAAGTaGCCCTCTCCAGAGACGCAGCGACGGCCTTGTCCC +
Preference number: 6 (lower is better)
Translates to: KISLPCRVSNSK*PSPETQRRPCP
Trigger: GGGACAAGGCCGTCGCTGCGTCTCTGGAGAGGGCAACTTTGAGTTCGAAACCCGGCAAGGCAATGAGATCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523932.1
CDS GCA 72 bp CAGCAGAAGCCAAGGGGCGGTGGACCATCCCTCTGCTaGCTCTGTCACTTTGGGCCTTTCTTTAGTACAACA +
Preference number: 6 (lower is better)
Translates to: QQKPRGGGPSLC*LCHFGPFFSTT
Trigger: TGTTGTACTAAAGAAAGGCCCAAAGTGACAGAGGCAGCAGAGGGATGGTCCACCGCCCCTTGGCTTCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS CAA 72 bp CTGGCTTCTGTAGGTCTCATGGTCACAGCAAATTCCTaGTGGGGGCCGACTGTGACTGCGCTGCTGTACAAT +
Preference number: 6 (lower is better)
Translates to: LASVGLMVTANS*WGPTVTALLYN
Trigger: ATTGTACAGCAGCGCAGTCACAGTCGGCCCCCACAAGGAATTTGCTGTGACCATGAGACCTACAGAAGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276420.9
ENST00000523932.1
CDS CAA 72 bp CTGGCTTCTGTAGGTCTCATGGTCACAGCAAATTCCTaGTGGGGGCCGACTTTCCAAACGTCTGCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: LASVGLMVTANS*WGPTFQTSAAA
Trigger: AGCAGCAGCAGACGTTTGGAAAGTCGGCCCCCACAAGGAATTTGCTGTGACCATGAGACCTACAGAAGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518197.1
CDS CAA 72 bp CTGGCTTCTGTAGGTCTCATGGTCACAGCAAATTCCTaGTGGGGGCCGACTGGGGAGAAGAAGAGAGAGAAG +
Preference number: 6 (lower is better)
Translates to: LASVGLMVTANS*WGPTGEKKREK
Trigger: CTTCTCTCTCTTCTTCTCCCCAGTCGGCCCCCACAAGGAATTTGCTGTGACCATGAGACCTACAGAAGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522011.1
CDS CAA 72 bp GGGGCGGTGGACCATCCCTCTGCTGCCTCTGTCACTTaGGGCCTTTCTTTAGTACAACATTGTCATACTCAG +
Preference number: 6 (lower is better)
Translates to: GAVDHPSAASVT*GLSLVQHCHTQ
Trigger: CTGAGTATGACAATGTTGTACTAAAGAAAGGCCCAAAGTGACAGAGGCAGCAGAGGGATGGTCCACCGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS CAA 90 bp AGAAGCCAAGGGGCGGTGGACCATCCCTCTGCTGCCTCTGTCACTTaGGGCCTTTCTTTAGTACAACATTGTCATACTCAGTTCCTGGCT +
Preference number: 6 (lower is better)
Translates to: RSQGAVDHPSAASVT*GLSLVQHCHTQFLA
Trigger: AGCCAGGAACTGAGTATGACAATGTTGTACTAAAGAAAGGCCCAAAGTGACAGAGGCAGCAGAGGGATGGTCCACCGCCCCTTGGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS GCA 72 bp TTCTTTAGTACAACATTGTCATACTCAGTTCCTGGCTaGCAGCCAGAAGCAGAGAAATCCTGCCCGGCTGGC +
Preference number: 6 (lower is better)
Translates to: FFSTTLSYSVPG*QPEAEKSCPAG
Trigger: GCCAGCCGGGCAGGATTTCTCTGCTTCTGGCTGGCAGCCAGGAACTGAGTATGACAATGTTGTACTAAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS CAA 72 bp TGCCTCTGTCACTTTGGGCCTTTCTTTAGTACAACATaGTCATACTCAGTTCCTGGCTGCCAGCCAGAAGCA +
Preference number: 6 (lower is better)
Translates to: CLCHFGPFFSTT*SYSVPGCQPEA
Trigger: TGCTTCTGGCTGGCAGCCAGGAACTGAGTATGACAATGTTGTACTAAAGAAAGGCCCAAAGTGACAGAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276420.9
CDS TCA 72 bp AACAGCTGGCCTGCCTCACCACTGCCCAGTTCTAAATaGGCGTACCAGAACTTTTCTAGAAAGTATTATCCA +
Preference number: 6 (lower is better)
Translates to: NSWPASPLPSSK*AYQNFSRKYYP
Trigger: TGGATAATACTTTCTAGAAAAGTTCTGGTACGCTCATTTAGAACTGGGCAGTGGTGAGGCAGGCCAGCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522011.1