RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DOCK9 (Homo sapiens)

Ensembl gene IDs: ENSG00000088387

Ensembl transcript IDs: ENST00000339416.7, ENST00000340449.7, ENST00000376460.5, ENST00000400228.6, ENST00000427887.2, ENST00000442173.5, ENST00000448493.7, ENST00000450257.2, ENST00000472874.1, ENST00000473165.1, ENST00000479769.1, ENST00000481051.1, ENST00000627024.2, ENST00000630992.2, ENST00000638020.1, ENST00000652315.1, ENST00000682017.1

Found 2055 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGGAGATGGCGCCCAGCAGGTCCTTGTGCAGGCTGTTGTCCAGGGTaGTTCCCTTCTGCGGCGTCACCAGCGGATTCACAGCTGGTAGAG +
Preference number: 1 (lower is better)
Translates to: RRWRPAGPCAGCCPG*FPSAASPADSQLVE
Trigger: CTCTACCAGCTGTGAATCCGCTGGTGACGCCGCAGAAGGGAAGCACCCTGGACAACAGCCTGCACAAGGACCTGCTGGGCGCCATCTCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR TCA 90 bp AGGCTACCCGGAAGTAGGTCCCCAGAAGCCTGCGGCCCGAGTGCATaGCCTCGGTCACTTTGCTGTAGGCCCGGTGCAGCGTGTCATACA +
Preference number: 1 (lower is better)
Translates to: RLPGSRSPEACGPSA*PRSLCCRPGAACHT
Trigger: TGTATGACACGCTGCACCGGGCCTACAGCAAAGTGACCGAGGTCATGCACTCGGGCCGCAGGCTTCTGGGGACCTACTTCCGGGTAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
3UTR GCA 90 bp CCCAGCAGGTCCTTGTGCAGGCTGTTGTCCAGGGTGCTTCCCTTCTaGGGCGTCACCAGCGGATTCACAGCTGGTAGAGCCAGGGATTCA +
Preference number: 1 (lower is better)
Translates to: PSRSLCRLLSRVLPF*GVTSGFTAGRARDS
Trigger: TGAATCCCTGGCTCTACCAGCTGTGAATCCGCTGGTGACGCCGCAGAAGGGAAGCACCCTGGACAACAGCCTGCACAAGGACCTGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR CCA 90 bp TGGAGAGAAGCCCACAAGAGCATGGAGCGTTACCAATGCCGGAGATaGCGCCCAGCAGGTCCTTGTGCAGGCTGTTGTCCAGGGTGCTTC +
Preference number: 1 (lower is better)
Translates to: WREAHKSMERYQCRR*RPAGPCAGCCPGCF
Trigger: GAAGCACCCTGGACAACAGCCTGCACAAGGACCTGCTGGGCGCCATCTCCGGCATTGGTAACGCTCCATGCTCTTGTGGGCTTCTCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR GCA 90 bp GATGTCGGCGATGAGCTCGTAGCGCTCGGCTTTCCAGAGTCCATCTaGGCACTGCTCAAGGAGCTCCATCAGCACATCCTCGTTGAAATG +
Preference number: 1 (lower is better)
Translates to: DVGDELVALGFPESI*ALLKELHQHILVEM
Trigger: CATTTCAACGAGGATGTGCTGATGGAGCTCCTTGAGCAGTGCGCAGATGGACTCTGGAAAGCCGAGCGCTACGAGCTCATCGCCGACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
3UTR CCA 90 bp CTGCATCCCCACGTCTTCCATCATGGAGGCCTCCTCGTCGATGTTTaGGGTAATGACCCTGAAGGCGGTGCATCCTTGTCTAAACACGCC +
Preference number: 1 (lower is better)
Translates to: LHPHVFHHGGLLVDV*GNDPEGGASLSKHA
Trigger: GGCGTGTTTAGACAAGGATGCACCGCCTTCAGGGTCATTACCCCAAACATCGACGAGGAGGCCTCCATGATGGAAGACGTGGGGATGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
3UTR CCA 90 bp ACCGCGACTTCTTCCTGTGTGGCTCTGGTGAGGACTCGGAACAGCTaGTTTAGGATAGTGGGCAAGAAGGCGATCATCACGTGGCCTTCC +
Preference number: 1 (lower is better)
Translates to: TATSSCVALVRTRNS*FRIVGKKAIITWPS
Trigger: GGAAGGCCACGTGATGATCGCCTTCTTGCCCACTATCCTAAACCAGCTGTTCCGAGTCCTCACCAGAGCCACACAGGAAGAAGTCGCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR CCA 90 bp CCAAGACACTTTCAGAGTGATGGTGGAGAGAAGCCCACAAGAGCATaGAGCGTTACCAATGCCGGAGATGGCGCCCAGCAGGTCCTTGTG +
Preference number: 1 (lower is better)
Translates to: PRHFQSDGGEKPTRA*SVTNAGDGAQQVLV
Trigger: CACAAGGACCTGCTGGGCGCCATCTCCGGCATTGGTAACGCTCCATGCTCTTGTGGGCTTCTCTCCACCATCACTCTGAAAGTGTCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR CCA 90 bp TTCCGTGCTGAACCAAAAGGCGTGCCTCCAGCGGAAAGGCCTGGCTaGTTTGGCAGATGGCATCAGGAGATTTGGACTCTGTGTCTGGCA +
Preference number: 1 (lower is better)
Translates to: FRAEPKGVPPAERPG*FGRWHQEIWTLCLA
Trigger: TGCCAGACACAGAGTCCAAATCTCCTGATGCCATCTGCCAAACCAGCCAGGCCTTTCCGCTGGAGGCACGCCTTTTGGTTCAGCACGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR GCA 90 bp AAACGACTCTTTGGACTTGTACATTCCGTGCTGAACCAAAAGGCGTaGCTCCAGCGGAAAGGCCTGGCTGGTTTGGCAGATGGCATCAGG +
Preference number: 1 (lower is better)
Translates to: KRLFGLVHSVLNQKA*LQRKGLAGLADGIR
Trigger: CCTGATGCCATCTGCCAAACCAGCCAGGCCTTTCCGCTGGAGGCACGCCTTTTGGTTCAGCACGGAATGTACAAGTCCAAAGAGTCGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR CCA 90 bp AGCCGGTCACTGTTGGCACAGTTGTTGATGATGGACAGGGACTGCTaGAATCTGGTTCCCCCAATGCCAACAACGTCTGCTATCAGCTGG +
Preference number: 1 (lower is better)
Translates to: SRSLLAQLLMMDRDC*NLVPPMPTTSAISW
Trigger: CCAGCTGATAGCAGACGTTGTTGGCATTGGGGGAACCAGATTCCAGCAGTCCCTGTCCATCATCAACAACTGTGCCAACAGTGACCGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
3UTR TCA 90 bp GCCATGAGATGTAATCACACGACCGAAGACGAGCTGGTCATCCCGTaGACCATTGTGCTTGTTGGAGTCCCACTGATGGCGTTGAAGATG +
Preference number: 1 (lower is better)
Translates to: AMRCNHTTEDELVIP*TIVLVGVPLMALKM
Trigger: CATCTTCAACGCCATCAGTGGGACTCCAACAAGCACAATGGTTCACGGGATGACCAGCTCGTCTTCGGTCGTGTGATTACATCTCATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000630992.2
ENST00000652315.1
3UTR GCA 90 bp GGACAGGGACTGCTGGAATCTGGTTCCCCCAATGCCAACAACGTCTaGTATCAGCTGGCTGACAGATATGATGACTTGCAAATGTGTCCG +
Preference number: 1 (lower is better)
Translates to: GQGLLESGSPNANNV*YQLADRYDDLQMCP
Trigger: CGGACACATTTGCAAGTCATCATATCTGTCAGCCAGCTGATAGCAGACGTTGTTGGCATTGGGGGAACCAGATTCCAGCAGTCCCTGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
3UTR GCA 90 bp ATAAGCCGGTCACTGTTGGCACAGTTGTTGATGATGGACAGGGACTaGTGGAATCTGGTTCCCCCAATGCCAACAACGTCTGCTATCAGC +
Preference number: 1 (lower is better)
Translates to: ISRSLLAQLLMMDRD*WNLVPPMPTTSAIS
Trigger: GCTGATAGCAGACGTTGTTGGCATTGGGGGAACCAGATTCCAGCAGTCCCTGTCCATCATCAACAACTGTGCCAACAGTGACCGGCTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
3UTR TCA 90 bp ATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATaGGATGTAATCACACGACCGAAGACGAGCTGGTCATCCCGTGAA +
Preference number: 1 (lower is better)
Translates to: ILSLQMTKQVPTHGP*DVITRPKTSWSSRE
Trigger: TTCACGGGATGACCAGCTCGTCTTCGGTCGTGTGATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000630992.2
ENST00000652315.1
3UTR CCA 90 bp CGGAACAGCTGGTTTAGGATAGTGGGCAAGAAGGCGATCATCACGTaGCCTTCCATCGCATGCAGACTCTTAAGGTACTTTACAAGTTCG +
Preference number: 1 (lower is better)
Translates to: RNSWFRIVGKKAIIT*PSIACRLLRYFTSS
Trigger: CGAACTTGTAAAGTACCTTAAGAGTCTGCATGCGATGGAAGGCCACGTGATGATCGCCTTCTTGCCCACTATCCTAAACCAGCTGTTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR TCA 90 bp CCTGAGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTaGGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACT +
Preference number: 1 (lower is better)
Translates to: PEESQASGTFISGHG*GVSVVDYHKQEKNT
Trigger: AGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCTCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
3UTR CCA 90 bp GACTTCAAGGTCCTACCACACAAGTGTGACACGTTCACCAACTATTaGCTCCAAGACACTTTCAGAGTGATGGTGGAGAGAAGCCCACAA +
Preference number: 1 (lower is better)
Translates to: DFKVLPHKCDTFTNY*LQDTFRVMVERSPQ
Trigger: TTGTGGGCTTCTCTCCACCATCACTCTGAAAGTGTCTTGGAGCCAATAGTTGGTGAACGTGTCACACTTGTGTGGTAGGACCTTGAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR CCA 90 bp CAGACGCAAGCTGAAGATGCCATTACTTGGCACTTCACAACAGGCTaGTTGTTTTCAGATCTCAGTAGGCAAATGAGCTGCCATGGACTG +
Preference number: 1 (lower is better)
Translates to: QTQAEDAITWHFTTG*LFSDLSRQMSCHGL
Trigger: CAGTCCATGGCAGCTCATTTGCCTACTGAGATCTGAAAACAACCAGCCTGTTGTGAAGTGCCAAGTAATGGCATCTTCAGCTTGCGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR TCA 90 bp CAGAAGAAAGGCAAATGGAAACTCGTGACAGCAGCCAACATTTGCTaGGCATTTACCGTGTGCCAGGCTCTGTTGCAAGCATTTTGCATG +
Preference number: 1 (lower is better)
Translates to: QKKGKWKLVTAANIC*AFTVCQALLQAFCM
Trigger: CATGCAAAATGCTTGCAACAGAGCCTGGCACACGGTAAATGCTCAGCAAATGTTGGCTGCTGTCACGAGTTTCCATTTGCCTTTCTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR CCA 90 bp TGTGAGCACACATTCTCCCAGACGCAAGCTGAAGATGCCATTACTTaGCACTTCACAACAGGCTGGTTGTTTTCAGATCTCAGTAGGCAA +
Preference number: 1 (lower is better)
Translates to: CEHTFSQTQAEDAIT*HFTTGWLFSDLSRQ
Trigger: TTGCCTACTGAGATCTGAAAACAACCAGCCTGTTGTGAAGTGCCAAGTAATGGCATCTTCAGCTTGCGTCTGGGAGAATGTGTGCTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR TCA 90 bp TCGAGCTGGTCTTCTTTAATCAGACGTTCGTTTACCGCTAAGGCTTaGCCGCAAGCTTCCACAAATTGCCTGAAAACTTCCTTAAGCAGC +
Preference number: 1 (lower is better)
Translates to: SSWSSLIRRSFTAKA*PQASTNCLKTSLSS
Trigger: GCTGCTTAAGGAAGTTTTCAGGCAATTTGTGGAAGCTTGCGGTCAAGCCTTAGCGGTAAACGAACGTCTGATTAAAGAAGACCAGCTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR TCA 90 bp TCTCCCGTAAACAGTCGTTCAGGATCTGAGTCTTCTTCTGGACGATaGCATTTTCATAGTCGAGTGGCTCAATTAGCTTTGGCTTTGCCT +
Preference number: 1 (lower is better)
Translates to: SPVNSRSGSESSSGR*HFHSRVAQLALALP
Trigger: AGGCAAAGCCAAAGCTAATTGAGCCACTCGACTATGAAAATGTCATCGTCCAGAAGAAGACTCAGATCCTGAACGACTGTTTACGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479769.1
3UTR TCA 90 bp TGTGGGGTTTCTCATGTTAAATTCTACCCAGTTTCATCCCCTACATaGAATGGCGTATTACCACCACCACCACCGGCAAAGGTAAAGACA +
Preference number: 1 (lower is better)
Translates to: CGVSHVKFYPVSSPT*NGVLPPPPPAKVKT
Trigger: TGTCTTTACCTTTGCCGGTGGTGGTGGTGGTAATACGCCATTTCATGTAGGGGATGAAACTGGGTAGAATTTAACATGAGAAACCCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR TCA 90 bp TTCAGCCTAGGGATGCCACGAAATAAAGTGACACTAAGGGTGCTGTaGACGGGGAATATCTGGGAATCTGCTATAAACAACTATGAGCAG +
Preference number: 1 (lower is better)
Translates to: FSLGMPRNKVTLRVL*TGNIWESAINNYEQ
Trigger: CTGCTCATAGTTGTTTATAGCAGATTCCCAGATATTCCCCGTTCACAGCACCCTTAGTGTCACTTTATTTCGTGGCATCCCTAGGCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR GCA 90 bp GCAGAAGGCTTGAGAATCGTGGTCATGGATTTGGTCAGTTCTTCATaGACTGTCTTGTATTCAGAGGCAACATATGGCTCAGCCTTATAC +
Preference number: 1 (lower is better)
Translates to: AEGLRIVVMDLVSSS*TVLYSEATYGSALY
Trigger: GTATAAGGCTGAGCCATATGTTGCCTCTGAATACAAGACAGTGCATGAAGAACTGACCAAATCCATGACCACGATTCTCAAGCCTTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR CCA 90 bp TTGTTGGTGCTTATCCAGGGAATTGCTCTTCTCACTATTCCTTTCTaGAAGGCTGTTACCCGAATCTGTGCTTATGAGAGATCCTCTCGA +
Preference number: 1 (lower is better)
Translates to: LLVLIQGIALLTIPF*KAVTRICAYERSSR
Trigger: TCGAGAGGATCTCTCATAAGCACAGATTCGGGTAACAGCCTTCCAGAAAGGAATAGTGAGAAGAGCAATTCCCTGGATAAGCACCAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR TCA 90 bp TACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTaGCACGTTCACCAACTATTGGCTCCAAGACACTTTCAGAGTGAT +
Preference number: 1 (lower is better)
Translates to: YSGKQLRLQGPTTQV*HVHQLLAPRHFQSD
Trigger: ATCACTCTGAAAGTGTCTTGGAGCCAATAGTTGGTGAACGTGTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR GCA 90 bp CTTCTGAGTGATGTGTGGCATCAGCATATTTACAACGGTTTCCACTaGATGATGATAGGATGCAGGAAATCTCTGGTTTCGCAGCAACTT +
Preference number: 1 (lower is better)
Translates to: LLSDVWHQHIYNGFH*MMIGCRKSLVSQQL
Trigger: AAGTTGCTGCGAAACCAGAGATTTCCTGCATCCTATCATCATGCAGTGGAAACCGTTGTAAATATGCTGATGCCACACATCACTCAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR GCA 90 bp ACATCTCTTGATGAAGACAGCAAGGCTATGATTCGCGTTCTTAGATaGCTCTGGATTATCTCGAAACTTCTGAGTGATGTGTGGCATCAG +
Preference number: 1 (lower is better)
Translates to: TSLDEDSKAMIRVLR*LWIISKLLSDVWHQ
Trigger: CTGATGCCACACATCACTCAGAAGTTTCGAGATAATCCAGAGGCATCTAAGAACGCGAATCATAGCCTTGCTGTCTTCATCAAGAGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR GCA 90 bp TGGCATCAGCATATTTACAACGGTTTCCACTGCATGATGATAGGATaGAGGAAATCTCTGGTTTCGCAGCAACTTAACTTTGGAGTTCTC +
Preference number: 1 (lower is better)
Translates to: WHQHIYNGFHCMMIG*RKSLVSQQLNFGVL
Trigger: GAGAACTCCAAAGTTAAGTTGCTGCGAAACCAGAGATTTCCTGCATCCTATCATCATGCAGTGGAAACCGTTGTAAATATGCTGATGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR CCA 90 bp CTTGATGAAGACAGCAAGGCTATGATTCGCGTTCTTAGATGCCTCTaGATTATCTCGAAACTTCTGAGTGATGTGTGGCATCAGCATATT +
Preference number: 1 (lower is better)
Translates to: LDEDSKAMIRVLRCL*IISKLLSDVWHQHI
Trigger: AATATGCTGATGCCACACATCACTCAGAAGTTTCGAGATAATCCAGAGGCATCTAAGAACGCGAATCATAGCCTTGCTGTCTTCATCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR TCA 90 bp GTACATTATGTCCGGCATTTTCTTATGGAGAAACTATTAGAATCTTaGTTTGTGTCACGTGTTTTTCTCTCAGAGGTGGCCGCTCTTCTG +
Preference number: 1 (lower is better)
Translates to: VHYVRHFLMEKLLES*FVSRVFLSEVAALL
Trigger: CAGAAGAGCGGCCACCTCTGAGAGAAAAACACGTGACACAAATCAAGATTCTAATAGTTTCTCCATAAGAAAATGCCGGACATAATGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR TCA 90 bp CTCTGGTTTCGCAGCAACTTAACTTTGGAGTTCTCTATCAAATGCTaGGCCATAGATTTGATCAGTACATCAAAGAAAAACCATGAGTAC +
Preference number: 1 (lower is better)
Translates to: LWFRSNLTLEFSIKC*AIDLISTSKKNHEY
Trigger: GTACTCATGGTTTTTCTTTGATGTACTGATCAAATCTATGGCTCAGCATTTGATAGAGAACTCCAAAGTTAAGTTGCTGCGAAACCAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR TCA 90 bp GGTGCTGTGAACGGGGAATATCTGGGAATCTGCTATAAACAACTATaGGCAGAAAGGAAATCTAATGTGGAAATAAAATTTGTGATGTCC +
Preference number: 1 (lower is better)
Translates to: GAVNGEYLGICYKQL*AERKSNVEIKFVMS
Trigger: GGACATCACAAATTTTATTTCCACATTAGATTTCCTTTCTGCTCATAGTTGTTTATAGCAGATTCCCAGATATTCCCCGTTCACAGCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR TCA 90 bp CATGGTGACAGCTTTAAAGTACACCACCATTCACCACAGGATTTATaGTTTACCAATTACATACTCCACCATTTTGGCAAAAGGATGAAA +
Preference number: 1 (lower is better)
Translates to: HGDSFKVHHHSPQDL*FTNYILHHFGKRMK
Trigger: TTTCATCCTTTTGCCAAAATGGTGGAGTATGTAATTGGTAAATCATAAATCCTGTGGTGAATGGTGGTGTACTTTAAAGCTGTCACCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
3UTR CAA 90 bp GAGCATGGAGCGTTACCAATGCCGGAGATGGCGCCCAGCAGGTCCTaGTGCAGGCTGTTGTCCAGGGTGCTTCCCTTCTGCGGCGTCACC +
Preference number: 2 (lower is better)
Translates to: EHGALPMPEMAPSRS*CRLLSRVLPFCGVT
Trigger: GGTGACGCCGCAGAAGGGAAGCACCCTGGACAACAGCCTGCACAAGGACCTGCTGGGCGCCATCTCCGGCATTGGTAACGCTCCATGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR TCA 90 bp ATGACCCTGAAGGCGGTGCATCCTTGTCTAAACACGCCTCCCCGGCTCCTCCTCCGAGCCACGTCTTCCTaGGCTCGGGCGTGCTGGCAT +
Preference number: 2 (lower is better)
Translates to: MTLKAVHPCLNTPPRLLLRATSS*ARACWH
Trigger: ATGCCAGCACGCCCGAGCTCAGGAAGACGTGGCTCG...GAGGAGGAGCCGGGGAGGCGTGTTTAGACAAGGATGCACCGCCTTCAGGGTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339416.7
3UTR-3UTR TCA 90 bp GTAGGTCCCCAGAAGCCTGCGGCCCGAGTGCATGACCTCGGTCACTTTGCTGTACGAGCCACGTCTTCCTaGGCTCGGGCGTGCTGGCAT +
Preference number: 2 (lower is better)
Translates to: VGPQKPAARVHDLGHFAVRATSS*ARACWH
Trigger: ATGCCAGCACGCCCGAGCTCAGGAAGACGTGGCTCG...TACAGCAAAGTGACCGAGGTCATGCACTCGGGCCGCAGGCTTCTGGGGACCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
3UTR-3UTR TCA 90 bp CCGGCTCCTCCTCAGGCAGGCGCTATGGCTGTGGGGGAGAAGGGGCGGCTCCCAGCACATTGCTGCCTCTaGGAGATCGCCATTTTTGAC +
Preference number: 2 (lower is better)
Translates to: PAPPQAGAMAVGEKGRLPAHCCL*EIAIFD
Trigger: GTCAAAAATGGCGATCTCTCAGAGGCAGCAATGTGC...TGGGAGCCGCCCCTTCTCCCCCACAGCCATAGCGCCTGCCTGAGGAGGAGCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000339416.7
3UTR-3UTR GCA 90 bp GCGGCCCGAGTGCATGACCTCGGTCACTTTGCTGTAGGCCCGGTGCAGCGTGTCCATGGATCCTGGCCATaGTGTCGAGCCACGTCTTCC +
Preference number: 2 (lower is better)
Translates to: AARVHDLGHFAVGPVQRVHGSWP*CRATSS
Trigger: GGAAGACGTGGCTCGACAGCATGGCCAGGATCCATG...GACACGCTGCACCGGGCCTACAGCAAAGTGACCGAGGTCATGCACTCGGGCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
3UTR CAA 90 bp GATAGCCCGAAGGAAGGTTCGCCGAGACCGGGATGTGCTGCTCGCTaGTCACCACCCTTCCGTCTTTCAGGAGGGGAAGCCAGGAGTAGC +
Preference number: 2 (lower is better)
Translates to: DSPKEGSPRPGCAAR*SPPFRLSGGEARSS
Trigger: GCTACTCCTGGCTTCCCCTCCTGAAAGACGGAAGGGTGGTGACAAGCGAGCAGCACATCCCGGTCTCGGCGAACCTTCCTTCGGGCTATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR CAA 90 bp TTACCAATGCCGGAGATGGCGCCCAGCAGGTCCTTGTGCAGGCTGTaGTCCAGGGTGCTTCCCTTCTGCGGCGTCACCAGCGGATTCACA +
Preference number: 2 (lower is better)
Translates to: LPMPEMAPSRSLCRL*SRVLPFCGVTSGFT
Trigger: TGTGAATCCGCTGGTGACGCCGCAGAAGGGAAGCACCCTGGACAACAGCCTGCACAAGGACCTGCTGGGCGCCATCTCCGGCATTGGTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR GCA 90 bp CAGGCGCTATGGCTGTGGGGGAGAAGGGGCGGCTCCCACTGGACTGCTTCTTTCCTGGTGCAGAACATCTaGGTCCGAGTGGCCATAGCT +
Preference number: 2 (lower is better)
Translates to: QALWLWGRRGGSHWTASFLVQNI*VRVAIA
Trigger: AGCTATGGCCACTCGGACGCAGATGTTCTGCACCAG...GAAAGAAGCAGTCCAGTGGGAGCCGCCCCTTCTCCCCCACAGCCATAGCGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339416.7
3UTR-3UTR CCA 90 bp GTAGGTCCCCAGAAGCCTGCGGCCCGAGTGCATGACCTCGGTCACTTTGCTGTAAGGGGCGGCTCCCACTaGACTGCTTCTTTCCGTGTG +
Preference number: 2 (lower is better)
Translates to: VGPQKPAARVHDLGHFAVRGGSH*TASFRV
Trigger: CACACGGAAAGAAGCAGTCCAGTGGGAGCCGCCCCT...TACAGCAAAGTGACCGAGGTCATGCACTCGGGCCGCAGGCTTCTGGGGACCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339416.7
3UTR-3UTR CCA 90 bp CTCGGCTTTCCAGAGTCCATCTGCGCACTGCTCAAGGAGCTCCATCAGCACATCCTCAGGCAGGCGCTATaGCTGTGGGGGAGAAGGGGC +
Preference number: 2 (lower is better)
Translates to: LGFPESICALLKELHQHILRQAL*LWGRRG
Trigger: GCCCCTTCTCCCCCACAGCCATAGCGCCTGCCTGAG...GATGTGCTGATGGAGCTCCTTGAGCAGTGCGCAGATGGACTCTGGAAAGCCGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339416.7
3UTR-3UTR TCA 90 bp GGCCCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCGCTTTGTAGATGTCGGCGATaGGCTCGTAGCGCTCGGCTT +
Preference number: 2 (lower is better)
Translates to: GPVQRVIQMGQPLKIPPLCRCRR*ARSARL
Trigger: AAGCCGAGCGCTACGAGCTCATCGCCGACATCTACA...AAGCGGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
3UTR-3UTR CCA 90 bp GCGGCCCGAGTGCATGACCTCGGTCACTTTGCTGTAGGCCCGGTGCAGCGTGTCACATCCTCGTTGAAATaGACATCCTGCATCCCCACG +
Preference number: 2 (lower is better)
Translates to: AARVHDLGHFAVGPVQRVTSSLK*TSCIPT
Trigger: CGTGGGGATGCAGGATGTCCATTTCAACGAGGATGT...GACACGCTGCACCGGGCCTACAGCAAAGTGACCGAGGTCATGCACTCGGGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
3UTR-3UTR TCA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCCCCACACACGGGCCATaGGATGTAATCACACGACCG +
Preference number: 2 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTPTHGP*DVITRP
Trigger: CGGTCGTGTGATTACATCTCATGGCCCGTGTGTGGG...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
3UTR-3UTR GCA 90 bp CCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCGCTTCTCCATGGATCCTGGCCATaGTGTCGAGCCACGTCTTCC +
Preference number: 2 (lower is better)
Translates to: PVQRVIQMGQPLKIPPLLHGSWP*CRATSS
Trigger: GGAAGACGTGGCTCGACAGCATGGCCAGGATCCATG...GAGAAGCGGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
3UTR-3UTR GCA 90 bp GTAGGCCCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCGAGTCCATCTGCGCACTaGTCAAGGAGCTCCATCAGC +
Preference number: 2 (lower is better)
Translates to: VGPVQRVIQMGQPLKIPPSPSAH*SRSSIS
Trigger: GCTGATGGAGCTCCTTGAGCAGTGCGCAGATGGACT...CGGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGGGCCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
3UTR CAA 90 bp GTGCTGAACCAAAAGGCGTGCCTCCAGCGGAAAGGCCTGGCTGGTTaGGCAGATGGCATCAGGAGATTTGGACTCTGTGTCTGGCAGCTG +
Preference number: 2 (lower is better)
Translates to: VLNQKACLQRKGLAG*ADGIRRFGLCVWQL
Trigger: CAGCTGCCAGACACAGAGTCCAAATCTCCTGATGCCATCTGCCAAACCAGCCAGGCCTTTCCGCTGGAGGCACGCCTTTTGGTTCAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR TCA 90 bp GGCCCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCGCTTCACTGGGCAACCACATaGATAATGACCCGAGTCACG +
Preference number: 2 (lower is better)
Translates to: GPVQRVIQMGQPLKIPPLHWATT*IMTRVT
Trigger: CGTGACTCGGGTCATTATTCATGTGGTTGCCCAGTG...AAGCGGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR GCA 90 bp GCGGCCCGAGTGCATGACCTCGGTCACTTTGCTGTAGGCCCGGTGCAGCGTGTCTGGCCATTAGCACCGTaGGTATCCTTTTGGTTAAGT +
Preference number: 2 (lower is better)
Translates to: AARVHDLGHFAVGPVQRVWPLAP*VSFWLS
Trigger: ACTTAACCAAAAGGATACGCACGGTGCTAATGGCCA...GACACGCTGCACCGGGCCTACAGCAAAGTGACCGAGGTCATGCACTCGGGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
3UTR-3UTR GCA 90 bp CTCGGCTTTCCAGAGTCCATCTGCGCACTGCTCAAGGAGCTCCATCAGCACATCCCGGACCATAATGCCTaGCCATCCCAAGCTCCTGGT +
Preference number: 2 (lower is better)
Translates to: LGFPESICALLKELHQHIPDHNA*PSQAPG
Trigger: ACCAGGAGCTTGGGATGGGCAGGCATTATGGTCCGG...GATGTGCTGATGGAGCTCCTTGAGCAGTGCGCAGATGGACTCTGGAAAGCCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR CCA 90 bp GTAGGCCCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCGGGGACTGCTGGAATCTaGTTCCCCCAATGCCAACAA +
Preference number: 2 (lower is better)
Translates to: VGPVQRVIQMGQPLKIPPGTAGI*FPQCQQ
Trigger: TTGTTGGCATTGGGGGAACCAGATTCCAGCAGTCCC...CGGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGGGCCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
3UTR-3UTR CCA 90 bp GTAGGCCCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCGTGGTCGGCCAGGAGCTaGTTCTTAAACGCCAATGTA +
Preference number: 2 (lower is better)
Translates to: VGPVQRVIQMGQPLKIPPWSARS*FLNANV
Trigger: TACATTGGCGTTTAAGAACCAGCTCCTGGCCGACCA...CGGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGGGCCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
3UTR-3UTR CCA 90 bp TCCTGCATCCCCACGTCTTCCATCATGGAGGCCTCCTCGTCGATGTTTGGGGTACCACGTCTTCCATCATaGAGGCCTCCTCGTCGATGT +
Preference number: 2 (lower is better)
Translates to: SCIPTSSIMEASSSMFGVPRLPS*RPPRRC
Trigger: ACATCGACGAGGAGGCCTCCATGATGGAAGACGTGG...TACCCCAAACATCGACGAGGAGGCCTCCATGATGGAAGACGTGGGGATGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
3UTR-3UTR GCA 90 bp ATGACCCTGAAGGCGGTGCATCCTTGTCTAAACACGCCTCCCCGGCTCCTCCTCTCAAGTAATGACTGGTaGAGAACATCTGCGTCCGAG +
Preference number: 2 (lower is better)
Translates to: MTLKAVHPCLNTPPRLLLSSNDW*RTSASE
Trigger: CTCGGACGCAGATGTTCTGCACCAGTCATTACTTGA...GAGGAGGAGCCGGGGAGGCGTGTTTAGACAAGGATGCACCGCCTTCAGGGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339416.7
3UTR-3UTR GCA 90 bp ATGACCCTGAAGGCGGTGCATCCTTGTCTAAACACGCCTCCCCGGCTCCTCCTCAATGCCAACAACGTCTaGTATCAGCTGGCTGACAGA +
Preference number: 2 (lower is better)
Translates to: MTLKAVHPCLNTPPRLLLNANNV*YQLADR
Trigger: TCTGTCAGCCAGCTGATAGCAGACGTTGTTGGCATT...GAGGAGGAGCCGGGGAGGCGTGTTTAGACAAGGATGCACCGCCTTCAGGGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339416.7
3UTR-3UTR GCA 90 bp GGCCCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCGCTTATCTGGTTCCCCCAATaGCAACAACGTCTGCTATCA +
Preference number: 2 (lower is better)
Translates to: GPVQRVIQMGQPLKIPPLIWFPQ*QQRLLS
Trigger: TGATAGCAGACGTTGTTGGCATTGGGGGAACCAGAT...AAGCGGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
3UTR-3UTR CCA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTGGTCGGCCAGGAGCTaGTTCTTAAACGCCAATGTA +
Preference number: 2 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTWSARS*FLNANV
Trigger: TACATTGGCGTTTAAGAACCAGCTCCTGGCCGACCA...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR CCA 90 bp CTTTCCAGAGTCCATCTGCGCACTGCTCAAGGAGCTCCATCAGCACATCCTCGTCGACCGAAGACGAGCTaGTCATCCCGTGAACCATTG +
Preference number: 2 (lower is better)
Translates to: LSRVHLRTAQGAPSAHPRRPKTS*SSREPL
Trigger: CAATGGTTCACGGGATGACCAGCTCGTCTTCGGTCG...ACGAGGATGTGCTGATGGAGCTCCTTGAGCAGTGCGCAGATGGACTCTGGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR TCA 90 bp CTCCTTCGCCATTTCCCTGTAGTTGGCTTTCATTTCTTCCTGATACTCGAGCTGGGGCCAGCATTGACCTaGACACTCACGCTGCCCTGG +
Preference number: 2 (lower is better)
Translates to: LLRHFPVVGFHFFLILELGPALT*TLTLPW
Trigger: CCAGGGCAGCGTGAGTGTTCAGGTCAATGCTGGCCC...CAGCTCGAGTATCAGGAAGAAATGAAAGCCAACTACAGGGAAATGGCGAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR GCA 90 bp TGTAGGCCCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCTCAAGTAATGACTGGTaGAGAACATCTGCGTCCGAG +
Preference number: 2 (lower is better)
Translates to: CRPGAACHTDGPASQNPSSSNDW*RTSASE
Trigger: CTCGGACGCAGATGTTCTGCACCAGTCATTACTTGA...GGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGGGCCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
3UTR-3UTR GCA 90 bp AGCGCTCGGCTTTCCAGAGTCCATCTGCGCACTGCTCAAGGAGCTCCATCAGCAATCTGGTTCCCCCAATaGCAACAACGTCTGCTATCA +
Preference number: 2 (lower is better)
Translates to: SARLSRVHLRTAQGAPSAIWFPQ*QQRLLS
Trigger: TGATAGCAGACGTTGTTGGCATTGGGGGAACCAGAT...TGCTGATGGAGCTCCTTGAGCAGTGCGCAGATGGACTCTGGAAAGCCGAGCGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
3UTR-3UTR GCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTCCTTGGTCCTCCCTGTaGTCGGTCTCCCCAGTGATT +
Preference number: 2 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFPWSSL*SVSPVI
Trigger: AATCACTGGGGAGACCGAGCACAGGGAGGACCAAGG...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
3UTR-3UTR CCA 90 bp GAGCAGCTGGGAGGCCTCCGTCCTGATGGAGCTCAGCTTGGAGTTACAGCACTTGCTTCAAGTAATGACTaGTGCAGAACATCTGCGTCC +
Preference number: 2 (lower is better)
Translates to: EQLGGLRPDGAQLGVTALASSND*CRTSAS
Trigger: GGACGCAGATGTTCTGCACCAGTCATTACTTGAAGC...AAGTGCTGTAACTCCAAGCTGAGCTCCATCAGGACGGAGGCCTCCCAGCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
3UTR-3UTR CCA 90 bp GTAGGCCCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCGTTCAGAGGCAACATATaGCTCAGCCTTATACGCGTA +
Preference number: 2 (lower is better)
Translates to: VGPVQRVIQMGQPLKIPPFRGNI*LSLIRV
Trigger: TACGCGTATAAGGCTGAGCCATATGTTGCCTCTGAA...CGGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGGGCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR TCA 90 bp CCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCGCTTCTCTGGAGTTACAGCACTTaGGAATCTCGTAACACAGAG +
Preference number: 2 (lower is better)
Translates to: PVQRVIQMGQPLKIPPLLWSYST*ESRNTE
Trigger: CTCTGTGTTACGAGATTCTCAAGTGCTGTAACTCCA...GAGAAGCGGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
3UTR-3UTR TCA 90 bp CACACACGGGCCATGAGATGTAATCACACGACCGAAGACGAGCTGGTCATCCCGATGGCGTTGAAGATGTaGAGGGAATTCGGTAAGACG +
Preference number: 2 (lower is better)
Translates to: HTRAMRCNHTTEDELVIPMALKM*REFGKT
Trigger: CGTCTTACCGAATTCCCTTCACATCTTCAACGCCAT...CGGGATGACCAGCTCGTCTTCGGTCGTGTGATTACATCTCATGGCCCGTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000630992.2
ENST00000652315.1
3UTR-3UTR CCA 90 bp AGCGCTCGGCTTTCCAGAGTCCATCTGCGCACTGCTCAAGGAGCTCCATCAGCACCGTGCGTATCCTTTTaGTTAAGTCCTTCACATCAG +
Preference number: 2 (lower is better)
Translates to: SARLSRVHLRTAQGAPSAPCVSF*LSPSHQ
Trigger: CTGATGTGAAGGACTTAACCAAAAGGATACGCACGG...TGCTGATGGAGCTCCTTGAGCAGTGCGCAGATGGACTCTGGAAAGCCGAGCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
3UTR-3UTR TCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTGAGCTGGTCATCCCGTaGACCATTGTGCTTGTTGGA +
Preference number: 2 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFELVIP*TIVLVG
Trigger: TCCAACAAGCACAATGGTTCACGGGATGACCAGCTC...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000630992.2
ENST00000652315.1
3UTR-3UTR GCA 90 bp ATGACCCTGAAGGCGGTGCATCCTTGTCTAAACACGCCTCCCCGGCTCCTCCTCACAGATATGATGACTTaGAAATGTGTCCGGACAAAG +
Preference number: 2 (lower is better)
Translates to: MTLKAVHPCLNTPPRLLLTDMMT*KCVRTK
Trigger: CTTTGTCCGGACACATTTGCAAGTCATCATATCTGT...GAGGAGGAGCCGGGGAGGCGTGTTTAGACAAGGATGCACCGCCTTCAGGGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339416.7
3UTR-3UTR CCA 90 bp CTGGTTCCCCCAATGCCAACAACGTCTGCTATCAGCTGGCTGACAGATATGATGAGAGGATTATGTCCATaGTCGGCCAGGAGCTGGTTC +
Preference number: 2 (lower is better)
Translates to: LVPPMPTTSAISWLTDMMRGLCP*SARSWF
Trigger: GAACCAGCTCCTGGCCGACCATGGACATAATCCTCT...CATCATATCTGTCAGCCAGCTGATAGCAGACGTTGTTGGCATTGGGGGAACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
3UTR-3UTR CCA 90 bp TTAGGACAGTCTGCAGAATGGACAGGAGGCTCACCTGCCCGAAGAAGGCTACCCCCGTGCGTATCCTTTTaGTTAAGTCCTTCACATCAG +
Preference number: 2 (lower is better)
Translates to: LGQSAEWTGGSPARRRLPPCVSF*LSPSHQ
Trigger: CTGATGTGAAGGACTTAACCAAAAGGATACGCACGG...GGGTAGCCTTCTTCGGGCAGGTGAGCCTCCTGTCCATTCTGCAGACTGTCCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339416.7
3UTR-3UTR TCA 90 bp GTTACAGCACTTGAGAATCTCGTAACACAGAGCCGCACACATGTCCGCTCTCCCATGGCGTTGAAGATGTaGAGGGAATTCGGTAAGACG +
Preference number: 2 (lower is better)
Translates to: VTALENLVTQSRTHVRSPMALKM*REFGKT
Trigger: CGTCTTACCGAATTCCCTTCACATCTTCAACGCCAT...GGGAGAGCGGACATGTGTGCGGCTCTGTGTTACGAGATTCTCAAGTGCTGTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR TCA 90 bp GTCAGTGCGGAGCAATTGGAGGCTATGATGCTAAAGATCCCCAGTGGCCTATCTGGCTGTGAGCACCTGTaGCAATTCTTGGAGGATATG +
Preference number: 2 (lower is better)
Translates to: VSAEQLEAMMLKIPSGLSGCEHL*QFLEDM
Trigger: CATATCCTCCAAGAATTGTCACAGGTGCTCACAGCC...AGATAGGCCACTGGGGATCTTTAGCATCATAGCCTCCAATTGCTCCGCACTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR GCA 90 bp ACAGGCTGGTTGTTTTCAGATCTCAGTAGGCAAATGAGCTGCCATGGACTGGGATTTCCAGAGTCCATCTaGGCACTGCTCAAGGAGCTC +
Preference number: 2 (lower is better)
Translates to: TGWLFSDLSRQMSCHGLGFPESI*ALLKEL
Trigger: GAGCTCCTTGAGCAGTGCGCAGATGGACTCTGGAAA...TCCCAGTCCATGGCAGCTCATTTGCCTACTGAGATCTGAAAACAACCAGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR CCA 90 bp GGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCCCTTCATCTGGGCGGTaGCCATTAGCACCGTGCGTA +
Preference number: 2 (lower is better)
Translates to: GMAEGFQLLTITSRKRILPSSGR*PLAPCV
Trigger: TACGCACGGTGCTAATGGCCACCGCCCAGATGAAGG...GAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR CCA 90 bp TCCTGCATCCCCACGTCTTCCATCATGGAGGCCTCCTCGTCGATGTTTGGGGTATTTTTCTCTCAGAGGTaGCCGCTCTTCTGTTATTTC +
Preference number: 2 (lower is better)
Translates to: SCIPTSSIMEASSSMFGVFFSQR*PLFCYF
Trigger: GAAATAACAGAAGAGCGGCCACCTCTGAGAGAAAAA...TACCCCAAACATCGACGAGGAGGCCTCCATGATGGAAGACGTGGGGATGCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR TCA 90 bp ATGACTGGTGCAGAACATCTGCGTCCGAGTGGCCATAGCCATTGTCTACAGAAAAGAGATCGCCATTTTTaGCATGGATCCTGGCCATGC +
Preference number: 2 (lower is better)
Translates to: MTGAEHLRPSGHSHCLQKRDRHF*HGSWPC
Trigger: GCATGGCCAGGATCCATGTCAAAAATGGCGATCTCT...TTTCTGTAGACAATGGCTATGGCCACTCGGACGCAGATGTTCTGCACCAGTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR TCA 90 bp TTGATATCTTTCTCACACTGGCTATGTATCGCTTCCCCATGTACTGGAACTGGTCCCACACACGGGCCATaGGATGTAATCACACGACCG +
Preference number: 2 (lower is better)
Translates to: LISFSHWLCIASPCTGTGPTHGP*DVITRP
Trigger: CGGTCGTGTGATTACATCTCATGGCCCGTGTGTGGG...ACCAGTTCCAGTACATGGGGAAGCGATACATAGCCAGTGTGAGAAAGATATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR TCA 90 bp ATGACTGGTGCAGAACATCTGCGTCCGAGTGGCCATAGCCATTGTCTACAGAAAAACCCAGTTCAAAGATaGGGCTTCCCTGGAAGGTAC +
Preference number: 2 (lower is better)
Translates to: MTGAEHLRPSGHSHCLQKNPVQR*GFPGRY
Trigger: GTACCTTCCAGGGAAGCCTCATCTTTGAACTGGGTT...TTTCTGTAGACAATGGCTATGGCCACTCGGACGCAGATGTTCTGCACCAGTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR GCA 90 bp CTCCTTCGCCATTTCCCTGTAGTTGGCTTTCATTTCTTCCTGATACTCGAGCTGAGGCATCAATGTCAGTaGAGCCCTCCCTGCCATGTA +
Preference number: 2 (lower is better)
Translates to: LLRHFPVVGFHFFLILELRHQCQ*SPPCHV
Trigger: TACATGGCAGGGAGGGCTGCACTGACATTGATGCCT...CAGCTCGAGTATCAGGAAGAAATGAAAGCCAACTACAGGGAAATGGCGAAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR GCA 90 bp GTAGGCCCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCGTATAATGTTCATGGTTaGACACTACACGGAGAAATT +
Preference number: 2 (lower is better)
Translates to: VGPVQRVIQMGQPLKIPPYNVHG*TLHGEI
Trigger: AATTTCTCCGTGTAGTGTGCAACCATGAACATTATA...CGGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGGGCCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR GCA 90 bp ATGACTGGTGCAGAACATCTGCGTCCGAGTGGCCATAGCCATTGTCTACAGAAAATGAGGGACAGGAAATaGGAATGGTGCTGGCCAATC +
Preference number: 2 (lower is better)
Translates to: MTGAEHLRPSGHSHCLQKMRDRK*EWCWPI
Trigger: GATTGGCCAGCACCATTCGCATTTCCTGTCCCTCAT...TTTCTGTAGACAATGGCTATGGCCACTCGGACGCAGATGTTCTGCACCAGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR CAA 90 bp ACGCAAGCTGAAGATGCCATTACTTGGCACTTCACAACAGGCTGGTaGTTTTCAGATCTCAGTAGGCAAATGAGCTGCCATGGACTGGGA +
Preference number: 2 (lower is better)
Translates to: TQAEDAITWHFTTGW*FSDLSRQMSCHGLG
Trigger: TCCCAGTCCATGGCAGCTCATTTGCCTACTGAGATCTGAAAACAACCAGCCTGTTGTGAAGTGCCAAGTAATGGCATCTTCAGCTTGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR TCA 90 bp ACAGGCTGGTTGTTTTCAGATCTCAGTAGGCAAATGAGCTGCCATGGACTGGGAGTAAACTGCTATCTCTaGGGAAAAGCTAGCACAGGC +
Preference number: 2 (lower is better)
Translates to: TGWLFSDLSRQMSCHGLGVNCYL*GKASTG
Trigger: GCCTGTGCTAGCTTTTCCTCAGAGATAGCAGTTTAC...TCCCAGTCCATGGCAGCTCATTTGCCTACTGAGATCTGAAAACAACCAGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR TCA 90 bp CTCCTTCGCCATTTCCCTGTAGTTGGCTTTCATTTCTTCCTGATACTCGAGCTGATCTCAGTAGGCAAATaGGCTGCCATGGACTGGGAT +
Preference number: 2 (lower is better)
Translates to: LLRHFPVVGFHFFLILELISVGK*AAMDWD
Trigger: ATCCCAGTCCATGGCAGCTCATTTGCCTACTGAGAT...CAGCTCGAGTATCAGGAAGAAATGAAAGCCAACTACAGGGAAATGGCGAAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR GCA 90 bp CCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAAGCCGAGACCGGGATGTaGTGCTCGCTTGTCACCACC +
Preference number: 2 (lower is better)
Translates to: PGSLVQKLQWSVPLGHQKAETGM*CSLVTT
Trigger: GGTGGTGACAAGCGAGCAGCACATCCCGGTCTCGGC...TTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR CCA 90 bp CCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTCTCCCCTTCCCCTTaGTCCTCCCTGTGCTCGGTC +
Preference number: 2 (lower is better)
Translates to: PGSLVQKLQWSVPLGHQKLSPSP*SSLCSV
Trigger: GACCGAGCACAGGGAGGACCAAGGGGAAGGGGAGAG...TTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
3UTR-3UTR CCA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAACTCTCCCCTTCCCCTTaGTCCTCCCTGTGCTCGGTC +
Preference number: 2 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKLSPSP*SSLCSV
Trigger: GACCGAGCACAGGGAGGACCAAGGGGAAGGGGAGAG...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
3UTR-3UTR TCA 90 bp GGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCATTTCAGGGCATGGCTaGGGGGTTTCAGTTGTTGAC +
Preference number: 2 (lower is better)
Translates to: GMAEGFQLLTITSRKRILISGHG*GVSVVD
Trigger: GTCAACAACTGAAACCCCTCAGCCATGCCCTGAAAT...GAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
3UTR-3UTR TCA 90 bp CTGGTACATGACAGGGATGCGCTTCTTCACATAAGGGAAGCAGTGTATGGCTGTCTCGAAACTTCTGAGTaGTGTGTGGCATCAGCATAT +
Preference number: 2 (lower is better)
Translates to: LVHDRDALLHIREAVYGCLETSE*CVASAY
Trigger: ATATGCTGATGCCACACATCACTCAGAAGTTTCGAG...ACAGCCATACACTGCTTCCCTTATGTGAAGAAGCGCATCCCTGTCATGTACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR TCA 90 bp ATGACTGGTGCAGAACATCTGCGTCCGAGTGGCCATAGCCATTGTCTACAGAAATTGAAGACATATTTGTaGAGCTGGGTATTTGGGGGC +
Preference number: 2 (lower is better)
Translates to: MTGAEHLRPSGHSHCLQKLKTYL*SWVFGG
Trigger: GCCCCCAAATACCCAGCTTCACAAATATGTCTTCAA...TTTCTGTAGACAATGGCTATGGCCACTCGGACGCAGATGTTCTGCACCAGTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR GCA 90 bp GTCAGTGCGGAGCAATTGGAGGCTATGATGCTAAAGATCCCCAGTGGCCTATCTCATCCCTCTTCTTCGTaGTTCCTTTACTTGAGTTGT +
Preference number: 2 (lower is better)
Translates to: VSAEQLEAMMLKIPSGLSHPSSS*FLYLSC
Trigger: ACAACTCAAGTAAAGGAAGCACGAAGAAGAGGGATG...AGATAGGCCACTGGGGATCTTTAGCATCATAGCCTCCAATTGCTCCGCACTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR GCA 90 bp GTGCTTAATAAGCCGGTCACTGTTGGCACAGTTGTTGATGATGGACAGGGACTGTGGCCTTCCATCGCATaGAGACTCTTAAGGTACTTT +
Preference number: 2 (lower is better)
Translates to: VLNKPVTVGTVVDDGQGLWPSIA*RLLRYF
Trigger: AAAGTACCTTAAGAGTCTGCATGCGATGGAAGGCCA...CAGTCCCTGTCCATCATCAACAACTGTGCCAACAGTGACCGGCTTATTAAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR CCA 90 bp TTGATATCTTTCTCACACTGGCTATGTATCGCTTCCCCATGTACTGGAACTGGTCTCCTCGTCGATGTTTaGGGTAATGACCCTGAAGGC +
Preference number: 2 (lower is better)
Translates to: LISFSHWLCIASPCTGTGLLVDV*GNDPEG
Trigger: GCCTTCAGGGTCATTACCCCAAACATCGACGAGGAG...ACCAGTTCCAGTACATGGGGAAGCGATACATAGCCAGTGTGAGAAAGATATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR CCA 90 bp CAAAGGCTGAGAAGCTGTCAGTGTCCAACAGGTACACACCACCCATTTGTAGTGCTTTATTTCAGGGCATaGCTGAGGGGTTTCAGTTGT +
Preference number: 2 (lower is better)
Translates to: QRLRSCQCPTGTHHPFVVLYFRA*LRGFSC
Trigger: ACAACTGAAACCCCTCAGCCATGCCCTGAAATAAAG...CACTACAAATGGGTGGTGTGTACCTGTTGGACACTGACAGCTTCTCAGCCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR CAA 90 bp GAGTACTTCAGTAGTTTGTTGCTGGTGAGGAAATCGGCAGAAGGCTaGAGAATCGTGGTCATGGATTTGGTCAGTTCTTCATGCACTGTC +
Preference number: 2 (lower is better)
Translates to: EYFSSLLLVRKSAEG*RIVVMDLVSSSCTV
Trigger: GACAGTGCATGAAGAACTGACCAAATCCATGACCACGATTCTCAAGCCTTCTGCCGATTTCCTCACCAGCAACAAACTACTGAAGTACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR CAA 90 bp TCAGTTTCAAGTACTTTTCACAGCTGCAATGTCAGTGCGGAGCAATaGGAGGCTATGATGCTAAAGATCCCCAGTGGCCTATCTCCAAGT +
Preference number: 2 (lower is better)
Translates to: SVSSTFHSCNVSAEQ*EAMMLKIPSGLSPS
Trigger: ACTTGGAGATAGGCCACTGGGGATCTTTAGCATCATAGCCTCCAATTGCTCCGCACTGACATTGCAGCTGTGAAAAGTACTTGAAACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR GCA 90 bp ACTAAATCTCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCCTTGGTCCTCCCTGTaGTCGGTCTCCCCAGTGATT +
Preference number: 2 (lower is better)
Translates to: TKSPGSLVQKLQWSVPLGPWSSL*SVSPVI
Trigger: AATCACTGGGGAGACCGAGCACAGGGAGGACCAAGG...ACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGAGATTTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
3UTR CAA 90 bp CTGGTGAGGAAATCGGCAGAAGGCTTGAGAATCGTGGTCATGGATTaGGTCAGTTCTTCATGCACTGTCTTGTATTCAGAGGCAACATAT +
Preference number: 2 (lower is better)
Translates to: LVRKSAEGLRIVVMD*VSSSCTVLYSEATY
Trigger: ATATGTTGCCTCTGAATACAAGACAGTGCATGAAGAACTGACCAAATCCATGACCACGATTCTCAAGCCTTCTGCCGATTTCCTCACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR CAA 90 bp GATGTTTCCACTCATCTGACTCCTCTCTGCCAACCACCATACACTTaGTATCAGCTCTTAATCCCTCTAACGACCGTTTTGAAGACATGG +
Preference number: 2 (lower is better)
Translates to: DVSTHLTPLCQPPYT*YQLLIPLTTVLKTW
Trigger: CCATGTCTTCAAAACGGTCGTTAGAGGGATTAAGAGCTGATACAAAGTGTATGGTGGTTGGCAGAGAGGAGTCAGATGAGTGGAAACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR TCA 90 bp ATTAGAATCTTGATTTGTGTCACGTGTTTTTCTCTCAGAGGTGGCCGCTCTTCTATTTCAGGGCATGGCTaGGGGGTTTCAGTTGTTGAC +
Preference number: 2 (lower is better)
Translates to: IRILICVTCFSLRGGRSSISGHG*GVSVVD
Trigger: GTCAACAACTGAAACCCCTCAGCCATGCCCTGAAAT...AGAAGAGCGGCCACCTCTGAGAGAAAAACACGTGACACAAATCAAGATTCTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR TCA 90 bp CTGGTACATGACAGGGATGCGCTTCTTCACATAAGGGAAGCAGTGTATGGCTGTGTTAGAAACCACCTTTaGTCGCTAAAGACTAAATGC +
Preference number: 2 (lower is better)
Translates to: LVHDRDALLHIREAVYGCVRNHL*SLKTKC
Trigger: GCATTTAGTCTTTAGCGATCAAAGGTGGTTTCTAAC...ACAGCCATACACTGCTTCCCTTATGTGAAGAAGCGCATCCCTGTCATGTACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR GCA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTACCTTGGTCCTCCCTGTaGTCGGTCTCCCCAGTGATT +
Preference number: 2 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLPWSSL*SVSPVI
Trigger: AATCACTGGGGAGACCGAGCACAGGGAGGACCAAGG...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
3UTR-3UTR GCA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAACAGTGCAGCCCTCCCTaGCATGTAGATCCCAGAACC +
Preference number: 2 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKQCSPP*HVDPRT
Trigger: GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTG...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
3UTR-3UTR CCA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAACGACCGAAGACGAGCTaGTCATCCCGTGAACCATTG +
Preference number: 2 (lower is better)
Translates to: SSSRVSTTPLLRHNENFERPKTS*SSREPL
Trigger: CAATGGTTCACGGGATGACCAGCTCGTCTTCGGTCG...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000630992.2
ENST00000652315.1
3UTR-3UTR CCA 90 bp ACTAAATCTCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCGACCGAAGACGAGCTaGTCATCCCGTGAACCATTG +
Preference number: 2 (lower is better)
Translates to: TKSPGSLVQKLQWSVPLGRPKTS*SSREPL
Trigger: CAATGGTTCACGGGATGACCAGCTCGTCTTCGGTCG...ACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGAGATTTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000630992.2
ENST00000652315.1
3UTR-3UTR CCA 90 bp CAAAGGCTGAGAAGCTGTCAGTGTCCAACAGGTACACACCACCCATTTGTAGTGGTTCTTAGATGCCTCTaGATTATCTCGAAACTTCTG +
Preference number: 2 (lower is better)
Translates to: QRLRSCQCPTGTHHPFVVVLRCL*IISKLL
Trigger: CAGAAGTTTCGAGATAATCCAGAGGCATCTAAGAAC...CACTACAAATGGGTGGTGTGTACCTGTTGGACACTGACAGCTTCTCAGCCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR TCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAGAGCTGGTCATCCCGTaGACCATTGTGCTTGTTGGA +
Preference number: 2 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNEELVIP*TIVLVG
Trigger: TCCAACAAGCACAATGGTTCACGGGATGACCAGCTC...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000630992.2
ENST00000652315.1
3UTR-3UTR TCA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGCCCACACACGGGCCATaGGATGTAATCACACGACCG +
Preference number: 2 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLPTHGP*DVITRP
Trigger: CGGTCGTGTGATTACATCTCATGGCCCGTGTGTGGG...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
3UTR-3UTR GCA 90 bp GTCTTTTTAATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCTTGGTCCTCCCTGTaGTCGGTCTCCCCAGTGATT +
Preference number: 2 (lower is better)
Translates to: VFLIQMWYRMFNYSRAVIPWSSL*SVSPVI
Trigger: AATCACTGGGGAGACCGAGCACAGGGAGGACCAAGG...AATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTATTAAAAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
3UTR-3UTR GCA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCCAGTGCAGCCCTCCCTaGCATGTAGATCCCAGAACC +
Preference number: 2 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFQCSPP*HVDPRT
Trigger: GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTG...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
3UTR-3UTR GCA 90 bp TTGATATCTTTCTCACACTGGCTATGTATCGCTTCCCCATGTACTGGAACTGGTTACAACGGTTTCCACTaGATGATGATAGGATGCAGG +
Preference number: 2 (lower is better)
Translates to: LISFSHWLCIASPCTGTGYNGFH*MMIGCR
Trigger: CCTGCATCCTATCATCATGCAGTGGAAACCGTTGTA...ACCAGTTCCAGTACATGGGGAAGCGATACATAGCCAGTGTGAGAAAGATATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR CCA 90 bp GTTCCCTTAGGACTGCTGAACAATAAACACCCAGCAGCCACCCCAAATGGTCAGCATACTCCACCATTTTaGCAAAAGGATGAAATTCTT +
Preference number: 2 (lower is better)
Translates to: VPLGLLNNKHPAATPNGQHTPPF*QKDEIL
Trigger: AAGAATTTCATCCTTTTGCCAAAATGGTGGAGTATG...CTGACCATTTGGGGTGGCTGCTGGGTGTTTATTGTTCAGCAGTCCTAAGGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448493.7
3UTR-3UTR CCA 90 bp GTCAGTGCGGAGCAATTGGAGGCTATGATGCTAAAGATCCCCAGTGGCCTATCTCATACTCCACCATTTTaGCAAAAGGATGAAATTCTT +
Preference number: 2 (lower is better)
Translates to: VSAEQLEAMMLKIPSGLSHTPPF*QKDEIL
Trigger: AAGAATTTCATCCTTTTGCCAAAATGGTGGAGTATG...AGATAGGCCACTGGGGATCTTTAGCATCATAGCCTCCAATTGCTCCGCACTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR CAA 90 bp TTGAGAATCGTGGTCATGGATTTGGTCAGTTCTTCATGCACTGTCTaGTATTCAGAGGCAACATATGGCTCAGCCTTATACGCGTACTTA +
Preference number: 2 (lower is better)
Translates to: LRIVVMDLVSSSCTV*YSEATYGSALYAYL
Trigger: TAAGTACGCGTATAAGGCTGAGCCATATGTTGCCTCTGAATACAAGACAGTGCATGAAGAACTGACCAAATCCATGACCACGATTCTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR GCA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAAAGGCATCAATGTCAGTaGAGCCCTCCCTGCCATGTA +
Preference number: 2 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKRHQCQ*SPPCHV
Trigger: TACATGGCAGGGAGGGCTGCACTGACATTGATGCCT...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
3UTR-3UTR CCA 90 bp GGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCCTTCTGAGTGATGTGTaGCATCAGCATATTTACAAC +
Preference number: 2 (lower is better)
Translates to: GMAEGFQLLTITSRKRILLLSDV*HQHIYN
Trigger: GTTGTAAATATGCTGATGCCACACATCACTCAGAAG...GAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR CAA 90 bp GCTGGAGGTCTTGGTATCTTTGAATCCTGCCTTTTCCAAATGGCATaGGTAAGTTCAACGGAATATAATGTTCATGGTTGCACACTACAC +
Preference number: 2 (lower is better)
Translates to: AGGLGIFESCLFQMA*VSSTEYNVHGCTLH
Trigger: GTGTAGTGTGCAACCATGAACATTATATTCCGTTGAACTTACCAATGCCATTTGGAAAAGGCAGGATTCAAAGATACCAAGACCTCCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR TCA 90 bp ACTAAATCTCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTATGGCGTTGAAGATGTaGAGGGAATTCGGTAAGACG +
Preference number: 2 (lower is better)
Translates to: TKSPGSLVQKLQWSVPLGMALKM*REFGKT
Trigger: CGTCTTACCGAATTCCCTTCACATCTTCAACGCCAT...ACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGAGATTTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000630992.2
ENST00000652315.1
3UTR-3UTR TCA 90 bp CGTATCCTTTTGGTTAAGTCCTTCACATCAGAGGAGAAGCTGGTGTGCTTAATATGCTTTTCATGCAGCTaGGTGGGCAACTCTATTTTA +
Preference number: 2 (lower is better)
Translates to: RILLVKSFTSEEKLVCLICFSCS*VGNSIL
Trigger: TAAAATAGAGTTGCCCACTCAGCTGCATGAAAAGCA...TATTAAGCACACCAGCTTCTCCTCTGATGTGAAGGACTTAACCAAAAGGATACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR GCA 90 bp GTCTTTTTAATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTAGGCATCAATGTCAGTaGAGCCCTCCCTGCCATGTA +
Preference number: 2 (lower is better)
Translates to: VFLIQMWYRMFNYSRAVIRHQCQ*SPPCHV
Trigger: TACATGGCAGGGAGGGCTGCACTGACATTGATGCCT...AATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTATTAAAAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
3UTR-3UTR GCA 90 bp ATTAGAATCTTGATTTGTGTCACGTGTTTTTCTCTCAGAGGTGGCCGCTCTTCTTGCATGATGATAGGATaGAGGAAATCTCTGGTTTCG +
Preference number: 2 (lower is better)
Translates to: IRILICVTCFSLRGGRSSCMMIG*RKSLVS
Trigger: CGAAACCAGAGATTTCCTGCATCCTATCATCATGCA...AGAAGAGCGGCCACCTCTGAGAGAAAAACACGTGACACAAATCAAGATTCTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR CCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACCATTGTGCTTGTTaGAGTCCCACTGATGGCGTT +
Preference number: 2 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNENHCAC*SPTDGV
Trigger: AACGCCATCAGTGGGACTCCAACAAGCACAATGGTT...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000630992.2
ENST00000652315.1
3UTR-3UTR TCA 90 bp TTGATATCTTTCTCACACTGGCTATGTATCGCTTCCCCATGTACTGGAACTGGTAAACTCAACAAACGTTaGACAAAAAGCAAACAGCGT +
Preference number: 2 (lower is better)
Translates to: LISFSHWLCIASPCTGTGKLNKR*TKSKQR
Trigger: ACGCTGTTTGCTTTTTGTTCAACGTTTGTTGAGTTT...ACCAGTTCCAGTACATGGGGAAGCGATACATAGCCAGTGTGAGAAAGATATCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR TCA 90 bp ATTCCAAGCACACTTGATATCTTTCTCACACTGGCTATGTATCGCTTCCCCATGCATAAGTTCAGATGTTaGAGCCTTGTTCCAATATGT +
Preference number: 2 (lower is better)
Translates to: IPSTLDIFLTLAMYRFPMHKFRC*SLVPIC
Trigger: ACATATTGGAACAAGGCTTCAACATCTGAACTTATG...CATGGGGAAGCGATACATAGCCAGTGTGAGAAAGATATCAAGTGTGCTTGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR CAA 90 bp CATTTGCTGAGCATTTACCGTGTGCCAGGCTCTGTTGCAAGCATTTaGCATGAATTAACTCTTTTAATCTTTACAGTGTCAACTAAGGAG +
Preference number: 2 (lower is better)
Translates to: HLLSIYRVPGSVASI*HELTLLIFTVSTKE
Trigger: CTCCTTAGTTGACACTGTAAAGATTAAAAGAGTTAATTCATGCAAAATGCTTGCAACAGAGCCTGGCACACGGTAAATGCTCAGCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR CCA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCATTGTGCTTGTTaGAGTCCCACTGATGGCGTT +
Preference number: 2 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFNHCAC*SPTDGV
Trigger: AACGCCATCAGTGGGACTCCAACAAGCACAATGGTT...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000630992.2
ENST00000652315.1
3UTR-3UTR CCA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCTCGTTTCCTAAGGCTTaGGCTCCAGATTCGGTTTTC +
Preference number: 2 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFSFPKA*APDSVF
Trigger: GAAAACCGAATCTGGAGCCCAAGCCTTAGGAAACGA...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR TCA 72 bp GGAAGTAGGTCCCCAGAAGCCTGCGGCCCGAGTGCATaGCCTCGGTCACTTTGCTGTAGGCCCGGTGCAGCG +
Preference number: 3 (lower is better)
Translates to: GSRSPEACGPSA*PRSLCCRPGAA
Trigger: CGCTGCACCGGGCCTACAGCAAAGTGACCGAGGTCATGCACTCGGGCCGCAGGCTTCTGGGGACCTACTTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
3UTR GCA 72 bp CGCCCAGCAGGTCCTTGTGCAGGCTGTTGTCCAGGGTaGTTCCCTTCTGCGGCGTCACCAGCGGATTCACAG +
Preference number: 3 (lower is better)
Translates to: RPAGPCAGCCPG*FPSAASPADSQ
Trigger: CTGTGAATCCGCTGGTGACGCCGCAGAAGGGAAGCACCCTGGACAACAGCCTGCACAAGGACCTGCTGGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR GCA 72 bp CAGTGTATGGCTGTCAGGATGGTGCGCCGTTTGCACTaGTCTTCCACCCCGCCCTGCCTCTTCCCGGTCTGC +
Preference number: 3 (lower is better)
Translates to: QCMAVRMVRRLH*SSTPPCLFPVC
Trigger: GCAGACCGGGAAGAGGCAGGGCGGGGTGGAAGAGCAGTGCAAACGGCGCACCATCCTGACAGCCATACACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR TCA 72 bp CATGGATCCTGGCCATGCTGTCGAGCCACGTCTTCCTaGGCTCGGGCGTGCTGGCATAGGATTTGGCCAGGC +
Preference number: 3 (lower is better)
Translates to: HGSWPCCRATSS*ARACWHRIWPG
Trigger: GCCTGGCCAAATCCTATGCCAGCACGCCCGAGCTCAGGAAGACGTGGCTCGACAGCATGGCCAGGATCCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
3UTR GCA 72 bp TCCTTGTGCAGGCTGTTGTCCAGGGTGCTTCCCTTCTaGGGCGTCACCAGCGGATTCACAGCTGGTAGAGCC +
Preference number: 3 (lower is better)
Translates to: SLCRLLSRVLPF*GVTSGFTAGRA
Trigger: GGCTCTACCAGCTGTGAATCCGCTGGTGACGCCGCAGAAGGGAAGCACCCTGGACAACAGCCTGCACAAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR GCA 72 bp TGGAGAGAAGCCCACAAGAGCATGGAGCGTTACCAATaGCGGAGATGGCGCCCAGCAGGTCCTTGTGCAGGC +
Preference number: 3 (lower is better)
Translates to: WREAHKSMERYQ*RRWRPAGPCAG
Trigger: GCCTGCACAAGGACCTGCTGGGCGCCATCTCCGGCATTGGTAACGCTCCATGCTCTTGTGGGCTTCTCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR CCA 72 bp GCCCACAAGAGCATGGAGCGTTACCAATGCCGGAGATaGCGCCCAGCAGGTCCTTGTGCAGGCTGTTGTCCA +
Preference number: 3 (lower is better)
Translates to: AHKSMERYQCRR*RPAGPCAGCCP
Trigger: TGGACAACAGCCTGCACAAGGACCTGCTGGGCGCCATCTCCGGCATTGGTAACGCTCCATGCTCTTGTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR CAA 90 bp CAGGCGCTATGGCTGTGGGGGAGAAGGGGCGGCTCCCACTGGACTGCTTCTTTCCTGTTGGCACAGTTGTaGATGATGGACAGGGACTGC +
Preference number: 3 (lower is better)
Translates to: QALWLWGRRGGSHWTASFLLAQL*MMDRDC
Trigger: GCAGTCCCTGTCCATCATCAACAACTGTGCCAACAG...GAAAGAAGCAGTCCAGTGGGAGCCGCCCCTTCTCCCCCACAGCCATAGCGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339416.7
3UTR-3UTR CAA 90 bp TGGCTGTGGGGGAGAAGGGGCGGCTCCCACTGGACTGCTTCTTTCCGTGTGAGACGTGGACATAGCACATaGCTGCCTCTGAGAGATCGC +
Preference number: 3 (lower is better)
Translates to: WLWGRRGGSHWTASFRVRRGHST*LPLRDR
Trigger: GCGATCTCTCAGAGGCAGCAATGTGCTATGTCCACG...TCTCACACGGAAAGAAGCAGTCCAGTGGGAGCCGCCCCTTCTCCCCCACAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339416.7
3UTR-3UTR CAA 90 bp CAGGCGCTATGGCTGTGGGGGAGAAGGGGCGGCTCCCACTGGACTGCTTCTTTCGAGAGATCGCCATTTTaGACATGGATCCTGGCCATG +
Preference number: 3 (lower is better)
Translates to: QALWLWGRRGGSHWTASFERSPF*TWILAM
Trigger: CATGGCCAGGATCCATGTCAAAAATGGCGATCTCTC...GAAAGAAGCAGTCCAGTGGGAGCCGCCCCTTCTCCCCCACAGCCATAGCGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000339416.7
3UTR-3UTR CAA 90 bp GCGGCCCGAGTGCATGACCTCGGTCACTTTGCTGTAGGCCCGGTGCAGCGTGTCATCAGCACATCCTCGTaGAAATGGACATCCTGCATC +
Preference number: 3 (lower is better)
Translates to: AARVHDLGHFAVGPVQRVISTSS*KWTSCI
Trigger: GATGCAGGATGTCCATTTCAACGAGGATGTGCTGAT...GACACGCTGCACCGGGCCTACAGCAAAGTGACCGAGGTCATGCACTCGGGCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
3UTR CCA 72 bp TTCCACCCCGCCCTGCCTCTTCCCGGTCTGCGTAAATaGCATCTCAAACATGAAGCGGCGGATGTTGTGGGA +
Preference number: 3 (lower is better)
Translates to: FHPALPLPGLRK*HLKHEAADVVG
Trigger: TCCCACAACATCCGCCGCTTCATGTTTGAGATGCCATTTACGCAGACCGGGAAGAGGCAGGGCGGGGTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR CAA 90 bp GGCCCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCGCTTCTGATGGAGCTCAGCTaGGAGTTACAGCACTTGAGA +
Preference number: 3 (lower is better)
Translates to: GPVQRVIQMGQPLKIPPLLMELS*ELQHLR
Trigger: TCTCAAGTGCTGTAACTCCAAGCTGAGCTCCATCAG...AAGCGGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
3UTR CCA 72 bp TTTCAGAGTGATGGTGGAGAGAAGCCCACAAGAGCATaGAGCGTTACCAATGCCGGAGATGGCGCCCAGCAG +
Preference number: 3 (lower is better)
Translates to: FQSDGGEKPTRA*SVTNAGDGAQQ
Trigger: CTGCTGGGCGCCATCTCCGGCATTGGTAACGCTCCATGCTCTTGTGGGCTTCTCTCCACCATCACTCTGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR CCA 72 bp GAACCAAAAGGCGTGCCTCCAGCGGAAAGGCCTGGCTaGTTTGGCAGATGGCATCAGGAGATTTGGACTCTG +
Preference number: 3 (lower is better)
Translates to: EPKGVPPAERPG*FGRWHQEIWTL
Trigger: CAGAGTCCAAATCTCCTGATGCCATCTGCCAAACCAGCCAGGCCTTTCCGCTGGAGGCACGCCTTTTGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR CAA 90 bp AGCGCTCGGCTTTCCAGAGTCCATCTGCGCACTGCTCAAGGAGCTCCATCAGCACTGATGGAGCTCAGCTaGGAGTTACAGCACTTGAGA +
Preference number: 3 (lower is better)
Translates to: SARLSRVHLRTAQGAPSALMELS*ELQHLR
Trigger: TCTCAAGTGCTGTAACTCCAAGCTGAGCTCCATCAG...TGCTGATGGAGCTCCTTGAGCAGTGCGCAGATGGACTCTGGAAAGCCGAGCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
3UTR GCA 72 bp AGCTCCATCAGCACATCCTCGTTGAAATGGACATCCTaGATCCCCACGTCTTCCATCATGGAGGCCTCCTCG +
Preference number: 3 (lower is better)
Translates to: SSISTSSLKWTS*IPTSSIMEASS
Trigger: CGAGGAGGCCTCCATGATGGAAGACGTGGGGATGCAGGATGTCCATTTCAACGAGGATGTGCTGATGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
3UTR CCA 72 bp CACGTCTTCCATCATGGAGGCCTCCTCGTCGATGTTTaGGGTAATGACCCTGAAGGCGGTGCATCCTTGTCT +
Preference number: 3 (lower is better)
Translates to: HVFHHGGLLVDV*GNDPEGGASLS
Trigger: AGACAAGGATGCACCGCCTTCAGGGTCATTACCCCAAACATCGACGAGGAGGCCTCCATGATGGAAGACGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
3UTR CCA 72 bp AAAAGGCGTGCCTCCAGCGGAAAGGCCTGGCTGGTTTaGCAGATGGCATCAGGAGATTTGGACTCTGTGTCT +
Preference number: 3 (lower is better)
Translates to: KRRASSGKAWLV*QMASGDLDSVS
Trigger: AGACACAGAGTCCAAATCTCCTGATGCCATCTGCCAAACCAGCCAGGCCTTTCCGCTGGAGGCACGCCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR CAA 90 bp GCTTCTTCACATAAGGGAAGCAGTGTATGGCTGTCAGGATGGTGCGCCGTTTGCTTCGTCCCTCTTCCCTaGGTACCACTGAGTAGGTGG +
Preference number: 3 (lower is better)
Translates to: ASSHKGSSVWLSGWCAVCFVPLP*VPLSRW
Trigger: CCACCTACTCAGTGGTACCAAGGGAAGAGGGACGAA...GCAAACGGCGCACCATCCTGACAGCCATACACTGCTTCCCTTATGTGAAGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR TCA 72 bp TGTAATCACACGACCGAAGACGAGCTGGTCATCCCGTaGACCATTGTGCTTGTTGGAGTCCCACTGATGGCG +
Preference number: 3 (lower is better)
Translates to: CNHTTEDELVIP*TIVLVGVPLMA
Trigger: CGCCATCAGTGGGACTCCAACAAGCACAATGGTTCACGGGATGACCAGCTCGTCTTCGGTCGTGTGATTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000630992.2
ENST00000652315.1
3UTR GCA 72 bp TTTGGACTTGTACATTCCGTGCTGAACCAAAAGGCGTaGCTCCAGCGGAAAGGCCTGGCTGGTTTGGCAGAT +
Preference number: 3 (lower is better)
Translates to: FGLVHSVLNQKA*LQRKGLAGLAD
Trigger: ATCTGCCAAACCAGCCAGGCCTTTCCGCTGGAGGCACGCCTTTTGGTTCAGCACGGAATGTACAAGTCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR CCA 72 bp CACATTGCTGCCTCTGAGAGATCGCCATTTTTGACATaGATCCTGGCCATGCTGTCGAGCCACGTCTTCCTG +
Preference number: 3 (lower is better)
Translates to: HIAASERSPFLT*ILAMLSSHVFL
Trigger: CAGGAAGACGTGGCTCGACAGCATGGCCAGGATCCATGTCAAAAATGGCGATCTCTCAGAGGCAGCAATGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
3UTR CCA 72 bp TCTTCCTGTGTGGCTCTGGTGAGGACTCGGAACAGCTaGTTTAGGATAGTGGGCAAGAAGGCGATCATCACG +
Preference number: 3 (lower is better)
Translates to: SSCVALVRTRNS*FRIVGKKAIIT
Trigger: CGTGATGATCGCCTTCTTGCCCACTATCCTAAACCAGCTGTTCCGAGTCCTCACCAGAGCCACACAGGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR CAA 90 bp GAGCAGCTGGGAGGCCTCCGTCCTGATGGAGCTCAGCTTGGAGTTACAGCACTTATTTTCAGCAGTGGCTaGCCTCCATCTACCCATTTA +
Preference number: 3 (lower is better)
Translates to: EQLGGLRPDGAQLGVTALIFSSG*PPSTHL
Trigger: TAAATGGGTAGATGGAGGCAAGCCACTGCTGAAAAT...AAGTGCTGTAACTCCAAGCTGAGCTCCATCAGGACGGAGGCCTCCCAGCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR CAA 90 bp GTAGGCCCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCGCGCAGCAACTTAACTTaGGAGTTCTCTATCAAATGC +
Preference number: 3 (lower is better)
Translates to: VGPVQRVIQMGQPLKIPPRSNLT*EFSIKC
Trigger: GCATTTGATAGAGAACTCCAAAGTTAAGTTGCTGCG...CGGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGGGCCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR CAA 90 bp GTAGGCCCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCGAAGGTGAAACATCTCTaGATGAAGACAGCAAGGCTA +
Preference number: 3 (lower is better)
Translates to: VGPVQRVIQMGQPLKIPPKVKHL*MKTARL
Trigger: TAGCCTTGCTGTCTTCATCAAGAGATGTTTCACCTT...CGGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGGGCCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR TCA 72 bp CATAGCACATTGCTGCCTCTGAGAGATCGCCATTTTTaGCATGGATCCTGGCCATGCTGTCGAGCCACGTCT +
Preference number: 3 (lower is better)
Translates to: HSTLLPLRDRHF*HGSWPCCRATS
Trigger: AGACGTGGCTCGACAGCATGGCCAGGATCCATGTCAAAAATGGCGATCTCTCAGAGGCAGCAATGTGCTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
3UTR TCA 72 bp GTGCTTGTTGGAGTCCCACTGATGGCGTTGAAGATGTaGAGGGAATTCGGTAAGACGCTCGTCTTCTCCTCC +
Preference number: 3 (lower is better)
Translates to: VLVGVPLMALKM*REFGKTLVFSS
Trigger: GGAGGAGAAGACGAGCGTCTTACCGAATTCCCTTCACATCTTCAACGCCATCAGTGGGACTCCAACAAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000630992.2
ENST00000652315.1
3UTR CCA 72 bp CTGTTGGCACAGTTGTTGATGATGGACAGGGACTGCTaGAATCTGGTTCCCCCAATGCCAACAACGTCTGCT +
Preference number: 3 (lower is better)
Translates to: LLAQLLMMDRDC*NLVPPMPTTSA
Trigger: AGCAGACGTTGTTGGCATTGGGGGAACCAGATTCCAGCAGTCCCTGTCCATCATCAACAACTGTGCCAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
3UTR CCA 72 bp TCTGGGCGGTGGCCATTAGCACCGTGCGTATCCTTTTaGTTAAGTCCTTCACATCAGAGGAGAAGCTGGTGT +
Preference number: 3 (lower is better)
Translates to: SGRWPLAPCVSF*LSPSHQRRSWC
Trigger: ACACCAGCTTCTCCTCTGATGTGAAGGACTTAACCAAAAGGATACGCACGGTGCTAATGGCCACCGCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
3UTR CCA 72 bp AGACGAGCTGGTCATCCCGTGAACCATTGTGCTTGTTaGAGTCCCACTGATGGCGTTGAAGATGTGAAGGGA +
Preference number: 3 (lower is better)
Translates to: RRAGHPVNHCAC*SPTDGVEDVKG
Trigger: TCCCTTCACATCTTCAACGCCATCAGTGGGACTCCAACAAGCACAATGGTTCACGGGATGACCAGCTCGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000630992.2
ENST00000652315.1
3UTR-3UTR CAA 90 bp CTTTCCAGAGTCCATCTGCGCACTGCTCAAGGAGCTCCATCAGCACATCCTCGTACCTCAGTAGCAATGTaGGCTTCAAGTAATGACTGG +
Preference number: 3 (lower is better)
Translates to: LSRVHLRTAQGAPSAHPRTSVAM*ASSNDW
Trigger: CCAGTCATTACTTGAAGCCAACATTGCTACTGAGGT...ACGAGGATGTGCTGATGGAGCTCCTTGAGCAGTGCGCAGATGGACTCTGGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
3UTR-3UTR CAA 90 bp CTTTCCAGAGTCCATCTGCGCACTGCTCAAGGAGCTCCATCAGCACATCCTCGTATCGTGGTCATGGATTaGGTCAGTTCTTCATGCACT +
Preference number: 3 (lower is better)
Translates to: LSRVHLRTAQGAPSAHPRIVVMD*VSSSCT
Trigger: AGTGCATGAAGAACTGACCAAATCCATGACCACGAT...ACGAGGATGTGCTGATGGAGCTCCTTGAGCAGTGCGCAGATGGACTCTGGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR CAA 90 bp TCCTGCATCCCCACGTCTTCCATCATGGAGGCCTCCTCGTCGATGTTTGGGGTAGAGGTCTTGGTATCTTaGAATCCTGCCTTTTCCAAA +
Preference number: 3 (lower is better)
Translates to: SCIPTSSIMEASSSMFGVEVLVS*NPAFSK
Trigger: TTTGGAAAAGGCAGGATTCAAAGATACCAAGACCTC...TACCCCAAACATCGACGAGGAGGCCTCCATGATGGAAGACGTGGGGATGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR TCA 72 bp TTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATaGGATGTAATCACACGACCGAAGACGAGCTGGTCA +
Preference number: 3 (lower is better)
Translates to: LQMTKQVPTHGP*DVITRPKTSWS
Trigger: TGACCAGCTCGTCTTCGGTCGTGTGATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000630992.2
ENST00000652315.1
3UTR TCA 72 bp GGCAAATGGAAACTCGTGACAGCAGCCAACATTTGCTaGGCATTTACCGTGTGCCAGGCTCTGTTGCAAGCA +
Preference number: 3 (lower is better)
Translates to: GKWKLVTAANIC*AFTVCQALLQA
Trigger: TGCTTGCAACAGAGCCTGGCACACGGTAAATGCTCAGCAAATGTTGGCTGCTGTCACGAGTTTCCATTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR CCA 72 bp CTGGTTCCCCCAATGCCAACAACGTCTGCTATCAGCTaGCTGACAGATATGATGACTTGCAAATGTGTCCGG +
Preference number: 3 (lower is better)
Translates to: LVPPMPTTSAIS*LTDMMTCKCVR
Trigger: CCGGACACATTTGCAAGTCATCATATCTGTCAGCCAGCTGATAGCAGACGTTGTTGGCATTGGGGGAACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
3UTR-3UTR CAA 90 bp CCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATTCATCCCGTGAACCATaGTGCTTGTTGGAGTCCCAC +
Preference number: 3 (lower is better)
Translates to: PEFANDKASPHTRAMRCNSSREP*CLLESH
Trigger: GTGGGACTCCAACAAGCACAATGGTTCACGGGATGA...ATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000630992.2
ENST00000652315.1
3UTR TCA 72 bp TCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTaGGGGGTTTCAGTTGTTGACTATCACAAGCAGGAA +
Preference number: 3 (lower is better)
Translates to: SQASGTFISGHG*GVSVVDYHKQE
Trigger: TTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
3UTR TCA 72 bp AGTGGCTGCGTCTCCCCAGGAGAGAAACCATGTGAATaGTTGTCGCAAGGGACAGGTAAAAACCCTGTGAAA +
Preference number: 3 (lower is better)
Translates to: SGCVSPGEKPCE*LSQGTGKNPVK
Trigger: TTTCACAGGGTTTTTACCTGTCCCTTGCGACAATCATTCACATGGTTTCTCTCCTGGGGAGACGCAGCCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR GCA 72 bp CTGCTGGAATCTGGTTCCCCCAATGCCAACAACGTCTaGTATCAGCTGGCTGACAGATATGATGACTTGCAA +
Preference number: 3 (lower is better)
Translates to: LLESGSPNANNV*YQLADRYDDLQ
Trigger: TTGCAAGTCATCATATCTGTCAGCCAGCTGATAGCAGACGTTGTTGGCATTGGGGGAACCAGATTCCAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
3UTR-3UTR CAA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGCTTCCTTTACTTGAGTaGTCACAGCTGACATGGAAG +
Preference number: 3 (lower is better)
Translates to: GKHPEFANDKASPHTRAMLPLLE*SQLTWK
Trigger: CTTCCATGTCAGCTGTGACAACTCAAGTAAAGGAAG...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR CAA 90 bp GGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCGCTGAGGGGTTTCAGTaGTTGACTATCACAAGCAGG +
Preference number: 3 (lower is better)
Translates to: GMAEGFQLLTITSRKRILAEGFQ*LTITSR
Trigger: CCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGC...GAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
3UTR-3UTR CAA 90 bp GACAGATATGATGACTTGCAAATGTGTCCGGACAAAGGACTTCTTTCCAGTGTATCATCCCGTGAACCATaGTGCTTGTTGGAGTCCCAC +
Preference number: 3 (lower is better)
Translates to: DRYDDLQMCPDKGLLSSVSSREP*CLLESH
Trigger: GTGGGACTCCAACAAGCACAATGGTTCACGGGATGA...TACACTGGAAAGAAGTCCTTTGTCCGGACACATTTGCAAGTCATCATATCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR TCA 72 bp AAGAAGATAAATTCGTCCCTCTTCCCTTGGTACCACTaGGTAGGTGGAAAAAGAAACCCTGAGCCTCAGGAC +
Preference number: 3 (lower is better)
Translates to: KKINSSLFPWYH*VGGKRNPEPQD
Trigger: GTCCTGAGGCTCAGGGTTTCTTTTTCCACCTACTCAGTGGTACCAAGGGAAGAGGGACGAATTTATCTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR TCA 72 bp CAACAAACTTGTAGCATTCAAACTGGTAATAAACACTaGGGAGCCTACCCAACTCTGAGGGGTGTCATGGGG +
Preference number: 3 (lower is better)
Translates to: QQTCSIQTGNKH*GAYPTLRGVMG
Trigger: CCCCATGACACCCCTCAGAGTTGGGTAGGCTCCTCAGTGTTTATTACCAGTTTGAATGCTACAAGTTTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR CCA 72 bp GCTGAAGATGCCATTACTTGGCACTTCACAACAGGCTaGTTGTTTTCAGATCTCAGTAGGCAAATGAGCTGC +
Preference number: 3 (lower is better)
Translates to: AEDAITWHFTTG*LFSDLSRQMSC
Trigger: GCAGCTCATTTGCCTACTGAGATCTGAAAACAACCAGCCTGTTGTGAAGTGCCAAGTAATGGCATCTTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR CCA 72 bp ACATTCTCCCAGACGCAAGCTGAAGATGCCATTACTTaGCACTTCACAACAGGCTGGTTGTTTTCAGATCTC +
Preference number: 3 (lower is better)
Translates to: TFSQTQAEDAIT*HFTTGWLFSDL
Trigger: GAGATCTGAAAACAACCAGCCTGTTGTGAAGTGCCAAGTAATGGCATCTTCAGCTTGCGTCTGGGAGAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR CAA 90 bp GGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCGAGGGGTTTCAGTTGTaGACTATCACAAGCAGGAAA +
Preference number: 3 (lower is better)
Translates to: GMAEGFQLLTITSRKRILEGFQL*TITSRK
Trigger: TTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTC...GAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
3UTR-3UTR CAA 90 bp CTCCTTCGCCATTTCCCTGTAGTTGGCTTTCATTTCTTCCTGATACTCGAGCTGCAACCACCATACACTTaGTATCAGCTCTTAATCCCT +
Preference number: 3 (lower is better)
Translates to: LLRHFPVVGFHFFLILELQPPYT*YQLLIP
Trigger: AGGGATTAAGAGCTGATACAAAGTGTATGGTGGTTG...CAGCTCGAGTATCAGGAAGAAATGAAAGCCAACTACAGGGAAATGGCGAAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR TCA 72 bp TCTCATGTTAAATTCTACCCAGTTTCATCCCCTACATaGAATGGCGTATTACCACCACCACCACCGGCAAAG +
Preference number: 3 (lower is better)
Translates to: SHVKFYPVSSPT*NGVLPPPPPAK
Trigger: CTTTGCCGGTGGTGGTGGTGGTAATACGCCATTTCATGTAGGGGATGAAACTGGGTAGAATTTAACATGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR TCA 72 bp GGGATGCCACGAAATAAAGTGACACTAAGGGTGCTGTaGACGGGGAATATCTGGGAATCTGCTATAAACAAC +
Preference number: 3 (lower is better)
Translates to: GMPRNKVTLRVL*TGNIWESAINN
Trigger: GTTGTTTATAGCAGATTCCCAGATATTCCCCGTTCACAGCACCCTTAGTGTCACTTTATTTCGTGGCATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR TCA 72 bp TCCTTTCTGGAAGGCTGTTACCCGAATCTGTGCTTATaGGAGATCCTCTCGAATCAGCATTTCTCACACTGT +
Preference number: 3 (lower is better)
Translates to: SFLEGCYPNLCL*EILSNQHFSHC
Trigger: ACAGTGTGAGAAATGCTGATTCGAGAGGATCTCTCATAAGCACAGATTCGGGTAACAGCCTTCCAGAAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR CCA 72 bp GACAGCAAGGCTATGATTCGCGTTCTTAGATGCCTCTaGATTATCTCGAAACTTCTGAGTGATGTGTGGCAT +
Preference number: 3 (lower is better)
Translates to: DSKAMIRVLRCL*IISKLLSDVWH
Trigger: ATGCCACACATCACTCAGAAGTTTCGAGATAATCCAGAGGCATCTAAGAACGCGAATCATAGCCTTGCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR CCA 72 bp AGACTGAAGAAGGCTGTGAGCACCTGTGACAATTCTTaGAGGATATGTGTGTTTGTGTGTGTGTGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: RLKKAVSTCDNS*RICVFVCVCVC
Trigger: ACACACACACACACACACAAACACACATATCCTCCAAGAATTGTCACAGGTGCTCACAGCCTTCTTCAGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR CCA 72 bp TTAATCCCTCTAACGACCGTTTTGAAGACATGGGTATaGAGGGCAAAGAAGATAGACAACATCCTGCCATGG +
Preference number: 3 (lower is better)
Translates to: LIPLTTVLKTWV*RAKKIDNILPW
Trigger: CCATGGCAGGATGTTGTCTATCTTCTTTGCCCTCCATACCCATGTCTTCAAAACGGTCGTTAGAGGGATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR CCA 72 bp CAGCTCTTAATCCCTCTAACGACCGTTTTGAAGACATaGGTATGGAGGGCAAAGAAGATAGACAACATCCTG +
Preference number: 3 (lower is better)
Translates to: QLLIPLTTVLKT*VWRAKKIDNIL
Trigger: CAGGATGTTGTCTATCTTCTTTGCCCTCCATACCCATGTCTTCAAAACGGTCGTTAGAGGGATTAAGAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR CAA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAATCATCCCGTGAACCATaGTGCTTGTTGGAGTCCCAC +
Preference number: 3 (lower is better)
Translates to: SSSRVSTTPLLRHNENFESSREP*CLLESH
Trigger: GTGGGACTCCAACAAGCACAATGGTTCACGGGATGA...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000630992.2
ENST00000652315.1
3UTR-3UTR CAA 90 bp ATTCCAAGCACACTTGATATCTTTCTCACACTGGCTATGTATCGCTTCCCCATGAGATGTAAGGAGAGTTaGCTCTTGAAGGAGAAGCAC +
Preference number: 3 (lower is better)
Translates to: IPSTLDIFLTLAMYRFPMRCKES*LLKEKH
Trigger: GTGCTTCTCCTTCAAGAGCAAACTCTCCTTACATCT...CATGGGGAAGCGATACATAGCCAGTGTGAGAAAGATATCAAGTGTGCTTGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR TCA 72 bp TTCAACGACATCCCTCTTCTTCGTGCTTCCTTTACTTaGGTTGTCACAGCTGACATGGAAGAATGTGAGCAA +
Preference number: 3 (lower is better)
Translates to: FNDIPLLRASFT*VVTADMEECEQ
Trigger: TTGCTCACATTCTTCCATGTCAGCTGTGACAACTCAAGTAAAGGAAGCACGAAGAAGAGGGATGTCGTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR TCA 72 bp AAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTaGCACGTTCACCAACTATTGGCTCCAAGACACTTT +
Preference number: 3 (lower is better)
Translates to: KQLRLQGPTTQV*HVHQLLAPRHF
Trigger: AAAGTGTCTTGGAGCCAATAGTTGGTGAACGTGTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR TCA 72 bp TCTTCTTTAATCAGACGTTCGTTTACCGCTAAGGCTTaGCCGCAAGCTTCCACAAATTGCCTGAAAACTTCC +
Preference number: 3 (lower is better)
Translates to: SSLIRRSFTAKA*PQASTNCLKTS
Trigger: GGAAGTTTTCAGGCAATTTGTGGAAGCTTGCGGTCAAGCCTTAGCGGTAAACGAACGTCTGATTAAAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR GCA 72 bp GATGTGTGGCATCAGCATATTTACAACGGTTTCCACTaGATGATGATAGGATGCAGGAAATCTCTGGTTTCG +
Preference number: 3 (lower is better)
Translates to: DVWHQHIYNGFH*MMIGCRKSLVS
Trigger: CGAAACCAGAGATTTCCTGCATCCTATCATCATGCAGTGGAAACCGTTGTAAATATGCTGATGCCACACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR GCA 72 bp GATGAAGACAGCAAGGCTATGATTCGCGTTCTTAGATaGCTCTGGATTATCTCGAAACTTCTGAGTGATGTG +
Preference number: 3 (lower is better)
Translates to: DEDSKAMIRVLR*LWIISKLLSDV
Trigger: CACATCACTCAGAAGTTTCGAGATAATCCAGAGGCATCTAAGAACGCGAATCATAGCCTTGCTGTCTTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR GCA 72 bp CAAGTTTATCACAGCGAACCACGGAATTTCCCAATGTaGTACTTTGTTGGTGCTTATCCAGGGAATTGCTCT +
Preference number: 3 (lower is better)
Translates to: QVYHSEPRNFPM*YFVGAYPGNCS
Trigger: AGAGCAATTCCCTGGATAAGCACCAACAAAGTAGCACATTGGGAAATTCCGTGGTTCGCTGTGATAAACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR CCA 72 bp CTTATCCAGGGAATTGCTCTTCTCACTATTCCTTTCTaGAAGGCTGTTACCCGAATCTGTGCTTATGAGAGA +
Preference number: 3 (lower is better)
Translates to: LIQGIALLTIPF*KAVTRICAYER
Trigger: TCTCTCATAAGCACAGATTCGGGTAACAGCCTTCCAGAAAGGAATAGTGAGAAGAGCAATTCCCTGGATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR CCA 72 bp TTTCTCACACTGGCTATGTATCGCTTCCCCATGTACTaGAACTGGTGCAGGCAGACTTCAGATATTGTAAAA +
Preference number: 3 (lower is better)
Translates to: FLTLAMYRFPMY*NWCRQTSDIVK
Trigger: TTTTACAATATCTGAAGTCTGCCTGCACCAGTTCCAGTACATGGGGAAGCGATACATAGCCAGTGTGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR CCA 72 bp GTAAATGGCATCTCAAACATGAAGCGGCGGATGTTGTaGGATCTCTCAAACTCTGTTTTCCTTTCTTGCAAC +
Preference number: 3 (lower is better)
Translates to: VNGISNMKRRML*DLSNSVFLSCN
Trigger: GTTGCAAGAAAGGAAAACAGAGTTTGAGAGATCCCACAACATCCGCCGCTTCATGTTTGAGATGCCATTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR TCA 72 bp AACAGTCGTTCAGGATCTGAGTCTTCTTCTGGACGATaGCATTTTCATAGTCGAGTGGCTCAATTAGCTTTG +
Preference number: 3 (lower is better)
Translates to: NSRSGSESSSGR*HFHSRVAQLAL
Trigger: CAAAGCTAATTGAGCCACTCGACTATGAAAATGTCATCGTCCAGAAGAAGACTCAGATCCTGAACGACTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479769.1
3UTR TCA 72 bp GCGTTCTTAGATGCCTCTGGATTATCTCGAAACTTCTaGGTGATGTGTGGCATCAGCATATTTACAACGGTT +
Preference number: 3 (lower is better)
Translates to: AFLDASGLSRNF*VMCGISIFTTV
Trigger: AACCGTTGTAAATATGCTGATGCCACACATCACTCAGAAGTTTCGAGATAATCCAGAGGCATCTAAGAACGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR TCA 72 bp AAGGTGAAACATCTCTTGATGAAGACAGCAAGGCTATaGTTCGCGTTCTTAGATGCCTCTGGATTATCTCGA +
Preference number: 3 (lower is better)
Translates to: KVKHLLMKTARL*FAFLDASGLSR
Trigger: TCGAGATAATCCAGAGGCATCTAAGAACGCGAATCATAGCCTTGCTGTCTTCATCAAGAGATGTTTCACCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR TCA 72 bp GGAGAAATAAAGACTGAAGAAGGCTGTGAGCACCTGTaGCAATTCTTGGAGGATATGTGTGTTTGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: GEIKTEEGCEHL*QFLEDMCVCVC
Trigger: ACACACACAAACACACATATCCTCCAAGAATTGTCACAGGTGCTCACAGCCTTCTTCAGTCTTTATTTCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR TCA 72 bp CAACAGGCTGGTTGTTTTCAGATCTCAGTAGGCAAATaGGCTGCCATGGACTGGGATACTTCTAAGTTAAAA +
Preference number: 3 (lower is better)
Translates to: QQAGCFQISVGK*AAMDWDTSKLK
Trigger: TTTTAACTTAGAAGTATCCCAGTCCATGGCAGCTCATTTGCCTACTGAGATCTGAAAACAACCAGCCTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR TCA 72 bp GTCCGGCATTTTCTTATGGAGAAACTATTAGAATCTTaGTTTGTGTCACGTGTTTTTCTCTCAGAGGTGGCC +
Preference number: 3 (lower is better)
Translates to: VRHFLMEKLLES*FVSRVFLSEVA
Trigger: GGCCACCTCTGAGAGAAAAACACGTGACACAAATCAAGATTCTAATAGTTTCTCCATAAGAAAATGCCGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR CAA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAACCTCAGTAGCAATGTaGGCTTCAAGTAATGACTGG +
Preference number: 3 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNETSVAM*ASSNDW
Trigger: CCAGTCATTACTTGAAGCCAACATTGCTACTGAGGT...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR CAA 90 bp CCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAAGAAAGCATCCTGAGTTaGCAAATGACAAAGCAAGTC +
Preference number: 3 (lower is better)
Translates to: PGSLVQKLQWSVPLGHQKESILS*QMTKQV
Trigger: GACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTC...TTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
3UTR-3UTR CAA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTAGAGGGGTTTCAGTTGTaGACTATCACAAGCAGGAAA +
Preference number: 3 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLEGFQL*TITSRK
Trigger: TTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTC...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR GCA 72 bp CATATTTACAACGGTTTCCACTGCATGATGATAGGATaGAGGAAATCTCTGGTTTCGCAGCAACTTAACTTT +
Preference number: 3 (lower is better)
Translates to: HIYNGFHCMMIG*RKSLVSQQLNF
Trigger: AAAGTTAAGTTGCTGCGAAACCAGAGATTTCCTGCATCCTATCATCATGCAGTGGAAACCGTTGTAAATATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR CAA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAAGAAAGCATCCTGAGTTaGCAAATGACAAAGCAAGTC +
Preference number: 3 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKESILS*QMTKQV
Trigger: GACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTC...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
3UTR-3UTR CAA 90 bp ACTAAATCTCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTGTGTCTACCACACCTTaGTTAAGACACAATGAAAAC +
Preference number: 3 (lower is better)
Translates to: TKSPGSLVQKLQWSVPLGVSTTP*LRHNEN
Trigger: GTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACAC...ACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGAGATTTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
3UTR TCA 72 bp CTCCAAGTTCTAAAGAAGTCCCCAATCCTAACAAGGTaGATTCTGAATTGGAGAAGAGTCAAAAGAGTCAAA +
Preference number: 3 (lower is better)
Translates to: LQVLKKSPILTR*ILNWRRVKRVK
Trigger: TTTGACTCTTTTGACTCTTCTCCAATTCAGAATTCACCTTGTTAGGATTGGGGACTTCTTTAGAACTTGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR CCA 72 bp GGACTGGTATTATTATTGCAGGATAAATTTGGGCATTaGTGTGGGGTTTCTCATGTTAAATTCTACCCAGTT +
Preference number: 3 (lower is better)
Translates to: GLVLLLQDKFGH*CGVSHVKFYPV
Trigger: AACTGGGTAGAATTTAACATGAGAAACCCCACACCAATGCCCAAATTTATCCTGCAATAATAATACCAGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR CAA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAAGTGTCTACCACACCTTaGTTAAGACACAATGAAAAC +
Preference number: 3 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKVSTTP*LRHNEN
Trigger: GTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACAC...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
3UTR TCA 72 bp CGCAGCAACTTAACTTTGGAGTTCTCTATCAAATGCTaGGCCATAGATTTGATCAGTACATCAAAGAAAAAC +
Preference number: 3 (lower is better)
Translates to: RSNLTLEFSIKC*AIDLISTSKKN
Trigger: GTTTTTCTTTGATGTACTGATCAAATCTATGGCTCAGCATTTGATAGAGAACTCCAAAGTTAAGTTGCTGCG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR-3UTR CAA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGGTGTCTACCACACCTTaGTTAAGACACAATGAAAAC +
Preference number: 3 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLVSTTP*LRHNEN
Trigger: GTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACAC...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
3UTR TCA 72 bp GATGTAAACATCAATTCACTTGTTAGAAACCACCTTTaGTCGCTAAAGACTAAATGCATACCTGTTTCAGAA +
Preference number: 3 (lower is better)
Translates to: DVNINSLVRNHL*SLKTKCIPVSE
Trigger: TTCTGAAACAGGTATGCATTTAGTCTTTAGCGATCAAAGGTGGTTTCTAACAAGTGAATTGATGTTTACATC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp GCGGCCCGAGTGCATGACCTCGGTCACTTTGCTGTAGGCCCGGTGCAGCGTGTCCGAGCCACGTCTTCCTaGGCTCGGGCGTGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: AARVHDLGHFAVGPVQRVRATSS*ARACWH
Trigger: ATGCCAGCACGCCCGAGCTCAGGAAGACGTGGCTCG...GACACGCTGCACCGGGCCTACAGCAAAGTGACCGAGGTCATGCACTCGGGCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp CCGGCTCCTCCTCAGGCAGGCGCTATGGCTGTGGGGGAGAAGGGGCGGCTCCCAGAGACCGGGATGTGCTaGTCGCTTGTCACCACCCTT +
Preference number: 4 (lower is better)
Translates to: PAPPQAGAMAVGEKGRLPETGMC*SLVTTL
Trigger: AAGGGTGGTGACAAGCGAGCAGCACATCCCGGTCTC...TGGGAGCCGCCCCTTCTCCCCCACAGCCATAGCGCCTGCCTGAGGAGGAGCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339416.7
3UTR CAA 72 bp CCGGAGATGGCGCCCAGCAGGTCCTTGTGCAGGCTGTaGTCCAGGGTGCTTCCCTTCTGCGGCGTCACCAGC +
Preference number: 4 (lower is better)
Translates to: PEMAPSRSLCRL*SRVLPFCGVTS
Trigger: GCTGGTGACGCCGCAGAAGGGAAGCACCCTGGACAACAGCCTGCACAAGGACCTGCTGGGCGCCATCTCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp CCGGCTCCTCCTCAGGCAGGCGCTATGGCTGTGGGGGAGAAGGGGCGGCTCCCATGCATGGCGGCTTCATaGAGGATGCCCTTGAGGACA +
Preference number: 4 (lower is better)
Translates to: PAPPQAGAMAVGEKGRLPCMAAS*RMPLRT
Trigger: TGTCCTCAAGGGCATCCTTCATGAAGCCGCCATGCA...TGGGAGCCGCCCCTTCTCCCCCACAGCCATAGCGCCTGCCTGAGGAGGAGCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR GCA 90 bp GCGGCCCGAGTGCATGACCTCGGTCACTTTGCTGTAGGCCCGGTGCAGCGTGTCGCCGAGACCGGGATGTaGTGCTCGCTTGTCACCACC +
Preference number: 4 (lower is better)
Translates to: AARVHDLGHFAVGPVQRVAETGM*CSLVTT
Trigger: GGTGGTGACAAGCGAGCAGCACATCCCGGTCTCGGC...GACACGCTGCACCGGGCCTACAGCAAAGTGACCGAGGTCATGCACTCGGGCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp GCGGCCCGAGTGCATGACCTCGGTCACTTTGCTGTAGGCCCGGTGCAGCGTGTCGGATGGTGCGCCGTTTaGACTGCTCTTCCACCCCGC +
Preference number: 4 (lower is better)
Translates to: AARVHDLGHFAVGPVQRVGWCAV*TALPPR
Trigger: GCGGGGTGGAAGAGCAGTGCAAACGGCGCACCATCC...GACACGCTGCACCGGGCCTACAGCAAAGTGACCGAGGTCATGCACTCGGGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp CAGGCGCTATGGCTGTGGGGGAGAAGGGGCGGCTCCCACTGGACTGCTTCTTTCCTCAGGCAGGCGCTATaGCTGTGGGGGAGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: QALWLWGRRGGSHWTASFLRQAL*LWGRRG
Trigger: GCCCCTTCTCCCCCACAGCCATAGCGCCTGCCTGAG...GAAAGAAGCAGTCCAGTGGGAGCCGCCCCTTCTCCCCCACAGCCATAGCGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR TCA 90 bp GCGGCCCGAGTGCATGACCTCGGTCACTTTGCTGTAGGCCCGGTGCAGCGTGTCGCCAGCCATGCTTGGTaGTCCCACCCTTCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: AARVHDLGHFAVGPVQRVASHAW*SHPSGN
Trigger: GTTCCCAGAAGGGTGGGATCACCAAGCATGGCTGGC...GACACGCTGCACCGGGCCTACAGCAAAGTGACCGAGGTCATGCACTCGGGCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp CACACACGGGCCATGAGATGTAATCACACGACCGAAGACGAGCTGGTCATCCCGGCAGCTCGGCCGCCGTaGCCGGCTTACTCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: HTRAMRCNHTTEDELVIPAARPP*PAYSAP
Trigger: GGGCGCTGAGTAAGCCGGGCACGGCGGCCGAGCTGC...CGGGATGACCAGCTCGTCTTCGGTCGTGTGATTACATCTCATGGCCCGTGTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652315.1
CDS-3UTR TCA 90 bp TCTAAACACGCCTCCCCGGCTCCTCCTCAGGCAGGCGCTATGGCTGTGGGGGAGTGTAGATGTCGGCGATaGGCTCGTAGCGCTCGGCTT +
Preference number: 4 (lower is better)
Translates to: SKHASPAPPQAGAMAVGECRCRR*ARSARL
Trigger: AAGCCGAGCGCTACGAGCTCATCGCCGACATCTACA...CTCCCCCACAGCCATAGCGCCTGCCTGAGGAGGAGCCGGGGAGGCGTGTTTAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR GCA 90 bp CCGGCTCCTCCTCAGGCAGGCGCTATGGCTGTGGGGGAGAAGGGGCGGCTCCCAGTGGTGGCGAGCATTTaGCTCACTGAGAAATGGTTC +
Preference number: 4 (lower is better)
Translates to: PAPPQAGAMAVGEKGRLPVVASI*LTEKWF
Trigger: GAACCATTTCTCAGTGAGGCAAATGCTCGCCACCAC...TGGGAGCCGCCCCTTCTCCCCCACAGCCATAGCGCCTGCCTGAGGAGGAGCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR CCA 90 bp CCGGCTCCTCCTCAGGCAGGCGCTATGGCTGTGGGGGAGAAGGGGCGGCTCCCACCAGCTGCTGCAATCTaGCATGCATCATTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: PAPPQAGAMAVGEKGRLPPAAAI*HASFLF
Trigger: GAACAGGAATGATGCATGCCAGATTGCAGCAGCTGG...TGGGAGCCGCCCCTTCTCCCCCACAGCCATAGCGCCTGCCTGAGGAGGAGCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR TCA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCCGAGCCACGTCTTCCTaGGCTCGGGCGTGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTRATSS*ARACWH
Trigger: ATGCCAGCACGCCCGAGCTCAGGAAGACGTGGCTCG...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TGGCTGTGGGGGAGAAGGGGCGGCTCCCACTGGACTGCTTCTTTCCGTGTGAGAGGCTGTTGTCCAGGGTaGTTCCCTTCTGCGGCGTCA +
Preference number: 4 (lower is better)
Translates to: WLWGRRGGSHWTASFRVRGCCPG*FPSAAS
Trigger: TGACGCCGCAGAAGGGAAGCACCCTGGACAACAGCC...TCTCACACGGAAAGAAGCAGTCCAGTGGGAGCCGCCCCTTCTCCCCCACAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR CCA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCAGTGGTCAGCCCCGCTaGCTGGGTCTGCAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTSGQPR*LGLQSL
Trigger: CAGGCTCTGCAGACCCAGCCAGCGGGGCTGACCACT...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442173.5
CDS-3UTR CCA 90 bp GCGGCCCGAGTGCATGACCTCGGTCACTTTGCTGTAGGCCCGGTGCAGCGTGTCCTTATTGTCAGCCAGTaGCTGCGTCTCCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: AARVHDLGHFAVGPVQRVLIVSQ*LRLPRR
Trigger: TCTCCTGGGGAGACGCAGCCACTGGCTGACAATAAG...GACACGCTGCACCGGGCCTACAGCAAAGTGACCGAGGTCATGCACTCGGGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR CAA 72 bp GCGTTACCAATGCCGGAGATGGCGCCCAGCAGGTCCTaGTGCAGGCTGTTGTCCAGGGTGCTTCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: ALPMPEMAPSRS*CRLLSRVLPFC
Trigger: GCAGAAGGGAAGCACCCTGGACAACAGCCTGCACAAGGACCTGCTGGGCGCCATCTCCGGCATTGGTAACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp CAGGCGCTATGGCTGTGGGGGAGAAGGGGCGGCTCCCACTGGACTGCTTCTTTCGCTCAGCGCAATGTGTaGTGCTCCCCTGAAGGACTT +
Preference number: 4 (lower is better)
Translates to: QALWLWGRRGGSHWTASFAQRNV*CSPEGL
Trigger: AAGTCCTTCAGGGGAGCATCACACATTGCGCTGAGC...GAAAGAAGCAGTCCAGTGGGAGCCGCCCCTTCTCCCCCACAGCCATAGCGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR TCA 90 bp GTAGGCCCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCGTGCGGCCCGAGTGCATaGCCTCGGTCACTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: VGPVQRVIQMGQPLKIPPCGPSA*PRSLCC
Trigger: ACAGCAAAGTGACCGAGGTCATGCACTCGGGCCGCA...CGGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGGGCCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR TCA 90 bp GCGGCCCGAGTGCATGACCTCGGTCACTTTGCTGTAGGCCCGGTGCAGCGTGTCATGGCATCTCAAACATaGAGCGGCGGATGTTGTGGG +
Preference number: 4 (lower is better)
Translates to: AARVHDLGHFAVGPVQRVMASQT*SGGCCG
Trigger: CCCACAACATCCGCCGCTTCATGTTTGAGATGCCAT...GACACGCTGCACCGGGCCTACAGCAAAGTGACCGAGGTCATGCACTCGGGCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR GCA 90 bp CCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCGCTTCTCATGGGCTCTGCCCACTaGCATTCATCAGCGCCGGGG +
Preference number: 4 (lower is better)
Translates to: PVQRVIQMGQPLKIPPLLMGSAH*HSSAPG
Trigger: CCCCGGCGCTGATGAATGGCAGTGGGCAGAGCCCAT...GAGAAGCGGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCGGATGGTGCGCCGTTTaGACTGCTCTTCCACCCCGC +
Preference number: 4 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTGWCAV*TALPPR
Trigger: GCGGGGTGGAAGAGCAGTGCAAACGGCGCACCATCC...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCCTCTCCCCTTCCCCTTaGTCCTCCCTGTGCTCGGTC +
Preference number: 4 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTLSPSP*SSLCSV
Trigger: GACCGAGCACAGGGAGGACCAAGGGGAAGGGGAGAG...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp ATCCTGAGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGAGTGGTCAGCCCCGCTaGCTGGGTCTGCAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: ILRSHRHPGPLFQGMAEGSGQPR*LGLQSL
Trigger: CAGGCTCTGCAGACCCAGCCAGCGGGGCTGACCACT...CCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCTCAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627024.2
CDS-3UTR CCA 90 bp ATCCTGAGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGCTTCCCAGGCACAAGTaGTCAGCCCCGCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: ILRSHRHPGPLFQGMAEGLPRHK*SAPLAG
Trigger: CCCAGCCAGCGGGGCTGACCACTTGTGCCTGGGAAG...CCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCTCAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp CAGGCGCTATGGCTGTGGGGGAGAAGGGGCGGCTCCCACTGGACTGCTTCTTTCACAGAAGGGAAGCTCTaGGCTGCCGTACTAGAATCC +
Preference number: 4 (lower is better)
Translates to: QALWLWGRRGGSHWTASFTEGKL*AAVLES
Trigger: GGATTCTAGTACGGCAGCTCAGAGCTTCCCTTCTGT...GAAAGAAGCAGTCCAGTGGGAGCCGCCCCTTCTCCCCCACAGCCATAGCGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR TCA 90 bp GAGCAGCTGGGAGGCCTCCGTCCTGATGGAGCTCAGCTTGGAGTTACAGCACTTGCCAGCCATGCTTGGTaGTCCCACCCTTCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: EQLGGLRPDGAQLGVTALASHAW*SHPSGN
Trigger: GTTCCCAGAAGGGTGGGATCACCAAGCATGGCTGGC...AAGTGCTGTAACTCCAAGCTGAGCTCCATCAGGACGGAGGCCTCCCAGCTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR TCA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCGCCAGCCATGCTTGGTaGTCCCACCCTTCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTASHAW*SHPSGN
Trigger: GTTCCCAGAAGGGTGGGATCACCAAGCATGGCTGGC...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GCGGCCCGAGTGCATGACCTCGGTCACTTTGCTGTAGGCCCGGTGCAGCGTGTCAGAGATCGCCATTTTTaGCATGGATCCTGGCCATGC +
Preference number: 4 (lower is better)
Translates to: AARVHDLGHFAVGPVQRVRDRHF*HGSWPC
Trigger: GCATGGCCAGGATCCATGTCAAAAATGGCGATCTCT...GACACGCTGCACCGGGCCTACAGCAAAGTGACCGAGGTCATGCACTCGGGCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR TCA 90 bp TGTAGGCCCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCTGCGGCCCGAGTGCATaGCCTCGGTCACTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: CRPGAACHTDGPASQNPSCGPSA*PRSLCC
Trigger: ACAGCAAAGTGACCGAGGTCATGCACTCGGGCCGCA...GGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGGGCCTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR TCA 90 bp TCCTGCATCCCCACGTCTTCCATCATGGAGGCCTCCTCGTCGATGTTTGGGGTAGGGCCAGCATTGACCTaGACACTCACGCTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SCIPTSSIMEASSSMFGVGPALT*TLTLPW
Trigger: CCAGGGCAGCGTGAGTGTTCAGGTCAATGCTGGCCC...TACCCCAAACATCGACGAGGAGGCCTCCATGATGGAAGACGTGGGGATGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp GCGGCCCGAGTGCATGACCTCGGTCACTTTGCTGTAGGCCCGGTGCAGCGTGTCAAGACACTTTCAGAGTaGTGGTGGAGAGAAGCCCAC +
Preference number: 4 (lower is better)
Translates to: AARVHDLGHFAVGPVQRVKTLSE*WWREAH
Trigger: GTGGGCTTCTCTCCACCATCACTCTGAAAGTGTCTT...GACACGCTGCACCGGGCCTACAGCAAAGTGACCGAGGTCATGCACTCGGGCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR GCA 90 bp TCCTGCATCCCCACGTCTTCCATCATGGAGGCCTCCTCGTCGATGTTTGGGGTAGCCGAGACCGGGATGTaGTGCTCGCTTGTCACCACC +
Preference number: 4 (lower is better)
Translates to: SCIPTSSIMEASSSMFGVAETGM*CSLVTT
Trigger: GGTGGTGACAAGCGAGCAGCACATCCCGGTCTCGGC...TACCCCAAACATCGACGAGGAGGCCTCCATGATGGAAGACGTGGGGATGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp CCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCGCTTCTCAGCCTGCGGCCCGAGTaGATGACCTCGGTCACTTTG +
Preference number: 4 (lower is better)
Translates to: PVQRVIQMGQPLKIPPLLSLRPE*MTSVTL
Trigger: CAAAGTGACCGAGGTCATGCACTCGGGCCGCAGGCT...GAGAAGCGGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp TGTAGGCCCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCAGCCTGCGGCCCGAGTaGATGACCTCGGTCACTTTG +
Preference number: 4 (lower is better)
Translates to: CRPGAACHTDGPASQNPSSLRPE*MTSVTL
Trigger: CAAAGTGACCGAGGTCATGCACTCGGGCCGCAGGCT...GGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGGGCCTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp GAAGTAGAGCAGCTGGGAGGCCTCCGTCCTGATGGAGCTCAGCTTGGAGTTACAGACAGGAGGCTCACCTaGCCGAAGAAGGCTACCCGG +
Preference number: 4 (lower is better)
Translates to: EVEQLGGLRPDGAQLGVTDRRLT*PKKATR
Trigger: CCGGGTAGCCTTCTTCGGGCAGGTGAGCCTCCTGTC...TGTAACTCCAAGCTGAGCTCCATCAGGACGGAGGCCTCCCAGCTGCTCTACTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR GCA 90 bp AGAGCAGCATCTCCCGTAAACAGTCGTTCAGGATCTGAGTCTTCTTCTGGACGAGCTGCGACATCCTCCTaGCCCCGCCGCCTCCGCCTC +
Preference number: 4 (lower is better)
Translates to: RAASPVNSRSGSESSSGRAATSS*PRRLRL
Trigger: GAGGCGGAGGCGGCGGGGGCAGGAGGATGTCGCAGC...TCGTCCAGAAGAAGACTCAGATCCTGAACGACTGTTTACGGGAGATGCTGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479769.1
CDS-3UTR GCA 90 bp CGTAAGGGAAGAGCAGCATCTCCCGTAAACAGTCGTTCAGGATCTGAGTCTTCTGCAGCTCGGCCGCCGTaGCCGGCTTACTCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: RKGRAASPVNSRSGSESSAARPP*PAYSAP
Trigger: GGGCGCTGAGTAAGCCGGGCACGGCGGCCGAGCTGC...AGAAGACTCAGATCCTGAACGACTGTTTACGGGAGATGCTGCTCTTCCCTTACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479769.1
CDS-3UTR CCA 90 bp CAGGCGCTATGGCTGTGGGGGAGAAGGGGCGGCTCCCACTGGACTGCTTCTTTCCCACATCCTCTTCCTTaGCTCTTCCGAAACAGGCTC +
Preference number: 4 (lower is better)
Translates to: QALWLWGRRGGSHWTASFPHPLP*LFRNRL
Trigger: GAGCCTGTTTCGGAAGAGCCAAGGAAGAGGATGTGG...GAAAGAAGCAGTCCAGTGGGAGCCGCCCCTTCTCCCCCACAGCCATAGCGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR CCA 90 bp GTAGGCCCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCGGTGATCCCACCCTTCTaGGAACCAAGGGAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: VGPVQRVIQMGQPLKIPPVIPPF*EPREAA
Trigger: TGCTGCCTCCCTTGGTTCCCAGAAGGGTGGGATCAC...CGGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGGGCCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp AGGGACTGCTGGAATCTGGTTCCCCCAATGCCAACAACGTCTGCTATCAGCTGGGCGCCGGGGACGTGGTaGCGAGCATTTGCCTCACTG +
Preference number: 4 (lower is better)
Translates to: RDCWNLVPPMPTTSAISWAPGTW*RAFASL
Trigger: CAGTGAGGCAAATGCTCGCCACCACGTCCCCGGCGC...CCAGCTGATAGCAGACGTTGTTGGCATTGGGGGAACCAGATTCCAGCAGTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp TCTAAACACGCCTCCCCGGCTCCTCCTCAGGCAGGCGCTATGGCTGTGGGGGAGGCTTCTTGTGAAAACTaGCCCACCAGGTCTGCCATA +
Preference number: 4 (lower is better)
Translates to: SKHASPAPPQAGAMAVGEASCEN*PTRSAI
Trigger: TATGGCAGACCTGGTGGGCCAGTTTTCACAAGAAGC...CTCCCCCACAGCCATAGCGCCTGCCTGAGGAGGAGCCGGGGAGGCGTGTTTAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR CCA 90 bp GCGGCCCGAGTGCATGACCTCGGTCACTTTGCTGTAGGCCCGGTGCAGCGTGTCAGGACTCGGAACAGCTaGTTTAGGATAGTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: AARVHDLGHFAVGPVQRVRTRNS*FRIVGK
Trigger: CTTGCCCACTATCCTAAACCAGCTGTTCCGAGTCCT...GACACGCTGCACCGGGCCTACAGCAAAGTGACCGAGGTCATGCACTCGGGCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR TCA 90 bp TGGCTGTGGGGGAGAAGGGGCGGCTCCCACTGGACTGCTTCTTTCCGTGTGAGACACTGGGCAACCACATaGATAATGACCCGAGTCACG +
Preference number: 4 (lower is better)
Translates to: WLWGRRGGSHWTASFRVRHWATT*IMTRVT
Trigger: CGTGACTCGGGTCATTATTCATGTGGTTGCCCAGTG...TCTCACACGGAAAGAAGCAGTCCAGTGGGAGCCGCCCCTTCTCCCCCACAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR TCA 90 bp TGTAGGCCCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCTGTAGATGTCGGCGATaGGCTCGTAGCGCTCGGCTT +
Preference number: 4 (lower is better)
Translates to: CRPGAACHTDGPASQNPSCRCRR*ARSARL
Trigger: AAGCCGAGCGCTACGAGCTCATCGCCGACATCTACA...GGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGGGCCTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp AGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGATGGGCTCTGCCCACTaGCATTCATCAGCGCCGGGG +
Preference number: 4 (lower is better)
Translates to: RSHRHPGPLFQGMAEGFQMGSAH*HSSAPG
Trigger: CCCCGGCGCTGATGAATGGCAGTGGGCAGAGCCCAT...CTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCGAGACCGGGATGTGCTaGTCGCTTGTCACCACCCTT +
Preference number: 4 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTETGMC*SLVTTL
Trigger: AAGGGTGGTGACAAGCGAGCAGCACATCCCGGTCTC...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp AGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGGCCGAGACCGGGATGTaGTGCTCGCTTGTCACCACC +
Preference number: 4 (lower is better)
Translates to: RSHRHPGPLFQGMAEGFQAETGM*CSLVTT
Trigger: GGTGGTGACAAGCGAGCAGCACATCCCGGTCTCGGC...CTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp GTAGGTCCCCAGAAGCCTGCGGCCCGAGTGCATGACCTCGGTCACTTTGCTGTACTGGTGCAGAACATCTaGGTCCGAGTGGCCATAGCT +
Preference number: 4 (lower is better)
Translates to: VGPQKPAARVHDLGHFAVLVQNI*VRVAIA
Trigger: AGCTATGGCCACTCGGACGCAGATGTTCTGCACCAG...TACAGCAAAGTGACCGAGGTCATGCACTCGGGCCGCAGGCTTCTGGGGACCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR GCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTGCCGAGGAGCACAGCTaGCGGAGCTCCGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFAEEHS*RSSATF
Trigger: GAAGGTGGCGGAGCTCCGGCAGCTGTGCTCCTCGGC...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp CCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCGCTTCTCGTGATCCCACCCTTCTaGGAACCAAGGGAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: PVQRVIQMGQPLKIPPLLVIPPF*EPREAA
Trigger: TGCTGCCTCCCTTGGTTCCCAGAAGGGTGGGATCAC...GAGAAGCGGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp TGGGAGGCCTCCGTCCTGATGGAGCTCAGCTTGGAGTTACAGCACTTGAGAATCTCAGCGCCGGGGACGTaGTGGCGAGCATTTGCCTCA +
Preference number: 4 (lower is better)
Translates to: WEASVLMELSLELQHLRISAPGT*WRAFAS
Trigger: TGAGGCAAATGCTCGCCACCACGTCCCCGGCGCTGA...GATTCTCAAGTGCTGTAACTCCAAGCTGAGCTCCATCAGGACGGAGGCCTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp TGTAGGCCCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCGCCCTTGAGGACAGATaGGCTCTGCCCACTGCCATT +
Preference number: 4 (lower is better)
Translates to: CRPGAACHTDGPASQNPSALEDR*ALPTAI
Trigger: AATGGCAGTGGGCAGAGCCCATCTGTCCTCAAGGGC...GGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGGGCCTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp AGAGCATGGAGCGTTACCAATGCCGGAGATGGCGCCCAGCAGGTCCTTGTGCAGCGCTTCCCCATGTACTaGAACTGGTGCAGGCAGACT +
Preference number: 4 (lower is better)
Translates to: RAWSVTNAGDGAQQVLVQRFPMY*NWCRQT
Trigger: AGTCTGCCTGCACCAGTTCCAGTACATGGGGAAGCG...CTGCACAAGGACCTGCTGGGCGCCATCTCCGGCATTGGTAACGCTCCATGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp GCGGCCCGAGTGCATGACCTCGGTCACTTTGCTGTAGGCCCGGTGCAGCGTGTCTGTTCATCATCTTCGTaGGAGTCGCCATTTCGCTTT +
Preference number: 4 (lower is better)
Translates to: AARVHDLGHFAVGPVQRVCSSSS*ESPFRF
Trigger: AAAGCGAAATGGCGACTCTCACGAAGATGATGAACA...GACACGCTGCACCGGGCCTACAGCAAAGTGACCGAGGTCATGCACTCGGGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR TCA 90 bp GCGGCCCGAGTGCATGACCTCGGTCACTTTGCTGTAGGCCCGGTGCAGCGTGTCTTATCTCGAAACTTCTaGGTGATGTGTGGCATCAGC +
Preference number: 4 (lower is better)
Translates to: AARVHDLGHFAVGPVQRVLSRNF*VMCGIS
Trigger: GCTGATGCCACACATCACTCAGAAGTTTCGAGATAA...GACACGCTGCACCGGGCCTACAGCAAAGTGACCGAGGTCATGCACTCGGGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp TGGCTGTGGGGGAGAAGGGGCGGCTCCCACTGGACTGCTTCTTTCCGTGTGAGAAACAAACAAGCTCTGTaGTTCCTCTTCCGCCTTCGC +
Preference number: 4 (lower is better)
Translates to: WLWGRRGGSHWTASFRVRNKQAL*FLFRLR
Trigger: GCGAAGGCGGAAGAGGAAGCACAGAGCTTGTTTGTT...TCTCACACGGAAAGAAGCAGTCCAGTGGGAGCCGCCCCTTCTCCCCCACAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR GCA 90 bp TGGCTGTGGGGGAGAAGGGGCGGCTCCCACTGGACTGCTTCTTTCCGTGTGAGAAGTCTTTGGCATGCCTaGTTGGCATTCTTCAGCACC +
Preference number: 4 (lower is better)
Translates to: WLWGRRGGSHWTASFRVRSLWHA*LAFFST
Trigger: GGTGCTGAAGAATGCCAAGCAGGCATGCCAAAGACT...TCTCACACGGAAAGAAGCAGTCCAGTGGGAGCCGCCCCTTCTCCCCCACAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR GCA 90 bp AGGGACTGCTGGAATCTGGTTCCCCCAATGCCAACAACGTCTGCTATCAGCTGGAGGGTGCTTCCCTTCTaGGGCGTCACCAGCGGATTC +
Preference number: 4 (lower is better)
Translates to: RDCWNLVPPMPTTSAISWRVLPF*GVTSGF
Trigger: GAATCCGCTGGTGACGCCGCAGAAGGGAAGCACCCT...CCAGCTGATAGCAGACGTTGTTGGCATTGGGGGAACCAGATTCCAGCAGTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp GGCCCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCGCTTTATATGGAGAAGCAATaGCGGAGATGGCGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: GPVQRVIQMGQPLKIPPLYMEKQ*RRWRPA
Trigger: TGCTGGGCGCCATCTCCGGCATTGCTTCTCCATATA...AAGCGGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR GCA 90 bp GAGCAGCTGGGAGGCCTCCGTCCTGATGGAGCTCAGCTTGGAGTTACAGCACTTAGTCCATCTGCGCACTaGTCAAGGAGCTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: EQLGGLRPDGAQLGVTALSPSAH*SRSSIS
Trigger: GCTGATGGAGCTCCTTGAGCAGTGCGCAGATGGACT...AAGTGCTGTAACTCCAAGCTGAGCTCCATCAGGACGGAGGCCTCCCAGCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTGCGAGTCCCTGGCCGTaGAAGGCACAGGCATGCCAG +
Preference number: 4 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFASPWP*KAQACQ
Trigger: CTGGCATGCCTGTGCCTTGCACGGCCAGGGACTCGC...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
CDS-3UTR GCA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGGCGAGTCCCTGGCCGTaGAAGGCACAGGCATGCCAG +
Preference number: 4 (lower is better)
Translates to: GKHPEFANDKASPHTRAMASPWP*KAQACQ
Trigger: CTGGCATGCCTGTGCCTTGCACGGCCAGGGACTCGC...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
CDS-3UTR GCA 90 bp ATCCTGAGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGTGCAACTGGAACAGCTaGGAGTCCCTGGCCGTGCAA +
Preference number: 4 (lower is better)
Translates to: ILRSHRHPGPLFQGMAEGCNWNS*ESLAVQ
Trigger: TTGCACGGCCAGGGACTCGCAGCTGTTCCAGTTGCA...CCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCTCAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTGTGCGCCGTTTGCACTaGTCTTCCACCCCGCCCTGC +
Preference number: 4 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFVRRLH*SSTPPC
Trigger: GCAGGGCGGGGTGGAAGAGCAGTGCAAACGGCGCAC...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGGCCGAGGAGCACAGCTaGCGGAGCTCCGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: ALESILSLQMTKQVPTHGAEEHS*RSSATF
Trigger: GAAGGTGGCGGAGCTCCGGCAGCTGTGCTCCTCGGC...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCGCCGAGGAGCACAGCTaGCGGAGCTCCGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRAAEEHS*RSSATF
Trigger: GAAGGTGGCGGAGCTCCGGCAGCTGTGCTCCTCGGC...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp CGTAAGGGAAGAGCAGCATCTCCCGTAAACAGTCGTTCAGGATCTGAGTCTTCTGAGTGGCTCACCTGCTaGCAGGAGCACGGAGCCGCG +
Preference number: 4 (lower is better)
Translates to: RKGRAASPVNSRSGSESSEWLTC*QEHGAA
Trigger: CGCGGCTCCGTGCTCCTGGCAGCAGGTGAGCCACTC...AGAAGACTCAGATCCTGAACGACTGTTTACGGGAGATGCTGCTCTTCCCTTACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479769.1
CDS-3UTR CCA 90 bp CACACACGGGCCATGAGATGTAATCACACGACCGAAGACGAGCTGGTCATCCCGGTGATCCCACCCTTCTaGGAACCAAGGGAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: HTRAMRCNHTTEDELVIPVIPPF*EPREAA
Trigger: TGCTGCCTCCCTTGGTTCCCAGAAGGGTGGGATCAC...CGGGATGACCAGCTCGTCTTCGGTCGTGTGATTACATCTCATGGCCCGTGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TGTTGGCTTCAAGTAATGACTGGTGCAGAACATCTGCGTCCGAGTGGCCATAGCGCGCCGGGGACGTGGTaGCGAGCATTTGCCTCACTG +
Preference number: 4 (lower is better)
Translates to: CWLQVMTGAEHLRPSGHSAPGTW*RAFASL
Trigger: CAGTGAGGCAAATGCTCGCCACCACGTCCCCGGCGC...GCTATGGCCACTCGGACGCAGATGTTCTGCACCAGTCATTACTTGAAGCCAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTGCGCCGGGGACGTGGTaGCGAGCATTTGCCTCACTG +
Preference number: 4 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFAPGTW*RAFASL
Trigger: CAGTGAGGCAAATGCTCGCCACCACGTCCCCGGCGC...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGGCGCCGGGGACGTGGTaGCGAGCATTTGCCTCACTG +
Preference number: 4 (lower is better)
Translates to: GKHPEFANDKASPHTRAMAPGTW*RAFASL
Trigger: CAGTGAGGCAAATGCTCGCCACCACGTCCCCGGCGC...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GCTTCTTCACATAAGGGAAGCAGTGTATGGCTGTCAGGATGGTGCGCCGTTTGCTCAGCGCCGGGGACGTaGTGGCGAGCATTTGCCTCA +
Preference number: 4 (lower is better)
Translates to: ASSHKGSSVWLSGWCAVCSAPGT*WRAFAS
Trigger: TGAGGCAAATGCTCGCCACCACGTCCCCGGCGCTGA...GCAAACGGCGCACCATCCTGACAGCCATACACTGCTTCCCTTATGTGAAGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCCGCTTCCCCATGTACTaGAACTGGTGCAGGCAGACT +
Preference number: 4 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTRFPMY*NWCRQT
Trigger: AGTCTGCCTGCACCAGTTCCAGTACATGGGGAAGCG...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp CAGGCGCTATGGCTGTGGGGGAGAAGGGGCGGCTCCCACTGGACTGCTTCTTTCGCTTCAAGTAATGACTaGTGCAGAACATCTGCGTCC +
Preference number: 4 (lower is better)
Translates to: QALWLWGRRGGSHWTASFASSND*CRTSAS
Trigger: GGACGCAGATGTTCTGCACCAGTCATTACTTGAAGC...GAAAGAAGCAGTCCAGTGGGAGCCGCCCCTTCTCCCCCACAGCCATAGCGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR CCA 90 bp GTAGGCCCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCGAGAGGATTATGTCCATaGTCGGCCAGGAGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: VGPVQRVIQMGQPLKIPPRGLCP*SARSWF
Trigger: GAACCAGCTCCTGGCCGACCATGGACATAATCCTCT...CGGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGGGCCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp TTAGGACAGTCTGCAGAATGGACAGGAGGCTCACCTGCCCGAAGAAGGCTACCCCCTTCATCTGGGCGGTaGCCATTAGCACCGTGCGTA +
Preference number: 4 (lower is better)
Translates to: LGQSAEWTGGSPARRRLPPSSGR*PLAPCV
Trigger: TACGCACGGTGCTAATGGCCACCGCCCAGATGAAGG...GGGTAGCCTTCTTCGGGCAGGTGAGCCTCCTGTCCATTCTGCAGACTGTCCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR CCA 90 bp CACACACGGGCCATGAGATGTAATCACACGACCGAAGACGAGCTGGTCATCCCGCCTTCATCTGGGCGGTaGCCATTAGCACCGTGCGTA +
Preference number: 4 (lower is better)
Translates to: HTRAMRCNHTTEDELVIPPSSGR*PLAPCV
Trigger: TACGCACGGTGCTAATGGCCACCGCCCAGATGAAGG...CGGGATGACCAGCTCGTCTTCGGTCGTGTGATTACATCTCATGGCCCGTGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp CCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCGCTTCTCCCACGTCTTCCATCATaGAGGCCTCCTCGTCGATGT +
Preference number: 4 (lower is better)
Translates to: PVQRVIQMGQPLKIPPLLPRLPS*RPPRRC
Trigger: ACATCGACGAGGAGGCCTCCATGATGGAAGACGTGG...GAGAAGCGGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCCGACCGAAGACGAGCTaGTCATCCCGTGAACCATTG +
Preference number: 4 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTRPKTS*SSREPL
Trigger: CAATGGTTCACGGGATGACCAGCTCGTCTTCGGTCG...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp CACACACGGGCCATGAGATGTAATCACACGACCGAAGACGAGCTGGTCATCCCGTTCTGGAGCAGTGGCTaGGAATGGGGCAAAGCAGGG +
Preference number: 4 (lower is better)
Translates to: HTRAMRCNHTTEDELVIPFWSSG*EWGKAG
Trigger: CCCTGCTTTGCCCCATTCCCAGCCACTGCTCCAGAA...CGGGATGACCAGCTCGTCTTCGGTCGTGTGATTACATCTCATGGCCCGTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR CAA 72 bp GATGTTTGGGGTAATGACCCTGAAGGCGGTGCATCCTaGTCTAAACACGCCTCCCCGGCTCCTCCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: DVWGNDPEGGAS*SKHASPAPPQA
Trigger: TGCCTGAGGAGGAGCCGGGGAGGCGTGTTTAGACAAGGATGCACCGCCTTCAGGGTCATTACCCCAAACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR TCA 90 bp ATGACCCTGAAGGCGGTGCATCCTTGTCTAAACACGCCTCCCCGGCTCCTCCTCACTGTACCATCTTCGTaGCAAGCAGTCACCGGTACT +
Preference number: 4 (lower is better)
Translates to: MTLKAVHPCLNTPPRLLLTVPSS*QAVTGT
Trigger: AGTACCGGTGACTGCTTGTCACGAAGATGGTACAGT...GAGGAGGAGCCGGGGAGGCGTGTTTAGACAAGGATGCACCGCCTTCAGGGTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR TCA 90 bp GCGGCCCGAGTGCATGACCTCGGTCACTTTGCTGTAGGCCCGGTGCAGCGTGTCTCTTCTTCTGGACGATaGCATTTTCATAGTCGAGTG +
Preference number: 4 (lower is better)
Translates to: AARVHDLGHFAVGPVQRVSSSGR*HFHSRV
Trigger: CACTCGACTATGAAAATGTCATCGTCCAGAAGAAGA...GACACGCTGCACCGGGCCTACAGCAAAGTGACCGAGGTCATGCACTCGGGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR TCA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCACCTCATGGTCACGCTaGTGGCACTGTTCATGTTGC +
Preference number: 4 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTTSWSR*WHCSCC
Trigger: GCAACATGAACAGTGCCATCAGCGTGACCATGAGGT...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp CAGGCGCTATGGCTGTGGGGGAGAAGGGGCGGCTCCCACTGGACTGCTTCTTTCTGTTCATCATCTTCGTaGGAGTCGCCATTTCGCTTT +
Preference number: 4 (lower is better)
Translates to: QALWLWGRRGGSHWTASFCSSSS*ESPFRF
Trigger: AAAGCGAAATGGCGACTCTCACGAAGATGATGAACA...GAAAGAAGCAGTCCAGTGGGAGCCGCCCCTTCTCCCCCACAGCCATAGCGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR TCA 90 bp AGGGACTGCTGGAATCTGGTTCCCCCAATGCCAACAACGTCTGCTATCAGCTGGCATGAAGGATGCCCTTaGGGACAGATGGGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: RDCWNLVPPMPTTSAISWHEGCP*GQMGSA
Trigger: GGCAGAGCCCATCTGTCCTCAAGGGCATCCTTCATG...CCAGCTGATAGCAGACGTTGTTGGCATTGGGGGAACCAGATTCCAGCAGTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR TCA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCGAGCTGGTCATCCCGTaGACCATTGTGCTTGTTGGA +
Preference number: 4 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTELVIP*TIVLVG
Trigger: TCCAACAAGCACAATGGTTCACGGGATGACCAGCTC...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp AGAGCAGCATCTCCCGTAAACAGTCGTTCAGGATCTGAGTCTTCTTCTGGACGATACTCAGCGCCCGGGTaGACTTCCGAGTCTCCGCCG +
Preference number: 4 (lower is better)
Translates to: RAASPVNSRSGSESSSGRYSAPG*TSESPP
Trigger: CGGCGGAGACTCGGAAGTTCACCCGGGCGCTGAGTA...TCGTCCAGAAGAAGACTCAGATCCTGAACGACTGTTTACGGGAGATGCTGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479769.1
CDS-3UTR GCA 90 bp CCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCGCTTCTCTTGTACAGCCAGCCATaGTTGGTGATCCCACCCTTC +
Preference number: 4 (lower is better)
Translates to: PVQRVIQMGQPLKIPPLLLYSQP*LVIPPF
Trigger: GAAGGGTGGGATCACCAAGCATGGCTGGCTGTACAA...GAGAAGCGGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp GGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTGAGACCGGGATGTGCTaGTCGCTTGTCACCACCCTT +
Preference number: 4 (lower is better)
Translates to: GVTGIRDLYFRAWLRGFSETGMC*SLVTTL
Trigger: AAGGGTGGTGACAAGCGAGCAGCACATCCCGGTCTC...ACTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGGCCGAGACCGGGATGTaGTGCTCGCTTGTCACCACC +
Preference number: 4 (lower is better)
Translates to: GKHPEFANDKASPHTRAMAETGM*CSLVTT
Trigger: GGTGGTGACAAGCGAGCAGCACATCCCGGTCTCGGC...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp AGGGACTGCTGGAATCTGGTTCCCCCAATGCCAACAACGTCTGCTATCAGCTGGCCGGACCATAATGCCTaGCCATCCCAAGCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: RDCWNLVPPMPTTSAISWPDHNA*PSQAPG
Trigger: ACCAGGAGCTTGGGATGGGCAGGCATTATGGTCCGG...CCAGCTGATAGCAGACGTTGTTGGCATTGGGGGAACCAGATTCCAGCAGTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp CCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCGCTTCTCAGGCTGCCCAGCTGCTaGAATCTGGCATGCATCATT +
Preference number: 4 (lower is better)
Translates to: PVQRVIQMGQPLKIPPLLRLPSC*NLACII
Trigger: AATGATGCATGCCAGATTGCAGCAGCTGGGCAGCCT...GAGAAGCGGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR GCA 90 bp CTTTCCAGAGTCCATCTGCGCACTGCTCAAGGAGCTCCATCAGCACATCCTCGTTCCAGGCTGCCCAGCTaGTGCAATCTGGCATGCATC +
Preference number: 4 (lower is better)
Translates to: LSRVHLRTAQGAPSAHPRSRLPS*CNLACI
Trigger: GATGCATGCCAGATTGCAGCAGCTGGGCAGCCTGGA...ACGAGGATGTGCTGATGGAGCTCCTTGAGCAGTGCGCAGATGGACTCTGGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR GCA 90 bp TCCTGCATCCCCACGTCTTCCATCATGGAGGCCTCCTCGTCGATGTTTGGGGTAGAGAGTTATCCAGGCTaGCCAGCTGCTGCAATCTGG +
Preference number: 4 (lower is better)
Translates to: SCIPTSSIMEASSSMFGVESYPG*PAAAIW
Trigger: CCAGATTGCAGCAGCTGGGCAGCCTGGATAACTCTC...TACCCCAAACATCGACGAGGAGGCCTCCATGATGGAAGACGTGGGGATGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR GCA 90 bp AGCGCTCGGCTTTCCAGAGTCCATCTGCGCACTGCTCAAGGAGCTCCATCAGCAGGACTTAGGACAGTCTaGAGAATGGACAGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: SARLSRVHLRTAQGAPSAGLRTV*RMDRRL
Trigger: GAGCCTCCTGTCCATTCTGCAGACTGTCCTAAGTCC...TGCTGATGGAGCTCCTTGAGCAGTGCGCAGATGGACTCTGGAAAGCCGAGCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR GCA 90 bp AACTGTATGATCCTGAGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCGAGTCCCTGGCCGTaGAAGGCACAGGCATGCCAG +
Preference number: 4 (lower is better)
Translates to: NCMILRSHRHPGPLFQGMASPWP*KAQACQ
Trigger: CTGGCATGCCTGTGCCTTGCACGGCCAGGGACTCGC...CATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCTCAGGATCATACAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp GGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCGAGTCCCTGGCCGTaGAAGGCACAGGCATGCCAG +
Preference number: 4 (lower is better)
Translates to: GFGKHPEFANDKASPHTRASPWP*KAQACQ
Trigger: CTGGCATGCCTGTGCCTTGCACGGCCAGGGACTCGC...CCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
CDS-3UTR GCA 90 bp AGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTGCAACTGGAACAGCTaGGAGTCCCTGGCCGTGCAA +
Preference number: 4 (lower is better)
Translates to: RSHRHPGPLFQGMAEGFQCNWNS*ESLAVQ
Trigger: TTGCACGGCCAGGGACTCGCAGCTGTTCCAGTTGCA...CTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCGTGCGCCGTTTGCACTaGTCTTCCACCCCGCCCTGC +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRAVRRLH*SSTPPC
Trigger: GCAGGGCGGGGTGGAAGAGCAGTGCAAACGGCGCAC...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGGTGCGCCGTTTGCACTaGTCTTCCACCCCGCCCTGC +
Preference number: 4 (lower is better)
Translates to: ALESILSLQMTKQVPTHGVRRLH*SSTPPC
Trigger: GCAGGGCGGGGTGGAAGAGCAGTGCAAACGGCGCAC...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp CCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATGCCGAGGAGCACAGCTaGCGGAGCTCCGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: PEFANDKASPHTRAMRCNAEEHS*RSSATF
Trigger: GAAGGTGGCGGAGCTCCGGCAGCTGTGCTCCTCGGC...ATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp AATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACACGGCAGCTCGGCCGCCGTaGCCGGCTTACTCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: NTQESNLDFKVLPHKCDTAARPP*PAYSAP
Trigger: GGGCGCTGAGTAAGCCGGGCACGGCGGCCGAGCTGC...CGTGTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427887.2
CDS-3UTR GCA 90 bp CATCGTAAGGGAAGAGCAGCATCTCCCGTAAACAGTCGTTCAGGATCTGAGTCTTGGGAGTGGCTCACCTaGTGCCAGGAGCACGGAGCC +
Preference number: 4 (lower is better)
Translates to: HRKGRAASPVNSRSGSESWEWLT*CQEHGA
Trigger: GGCTCCGTGCTCCTGGCAGCAGGTGAGCCACTCCCA...AGACTCAGATCCTGAACGACTGTTTACGGGAGATGCTGCTCTTCCCTTACGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479769.1
CDS-3UTR CCA 90 bp GGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTGTGATCCCACCCTTCTaGGAACCAAGGGAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: GVTGIRDLYFRAWLRGFSVIPPF*EPREAA
Trigger: TGCTGCCTCCCTTGGTTCCCAGAAGGGTGGGATCAC...ACTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp GGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCGCCGGGGACGTGGTaGCGAGCATTTGCCTCACTG +
Preference number: 4 (lower is better)
Translates to: GFGKHPEFANDKASPHTRAPGTW*RAFASL
Trigger: CAGTGAGGCAAATGCTCGCCACCACGTCCCCGGCGC...CCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp AGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGGCCCTTGAGGACAGATaGGCTCTGCCCACTGCCATT +
Preference number: 4 (lower is better)
Translates to: RSHRHPGPLFQGMAEGFQALEDR*ALPTAI
Trigger: AATGGCAGTGGGCAGAGCCCATCTGTCCTCAAGGGC...CTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp TCCTGCATCCCCACGTCTTCCATCATGGAGGCCTCCTCGTCGATGTTTGGGGTACGCTTCCCCATGTACTaGAACTGGTGCAGGCAGACT +
Preference number: 4 (lower is better)
Translates to: SCIPTSSIMEASSSMFGVRFPMY*NWCRQT
Trigger: AGTCTGCCTGCACCAGTTCCAGTACATGGGGAAGCG...TACCCCAAACATCGACGAGGAGGCCTCCATGATGGAAGACGTGGGGATGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp AGCGCTCGGCTTTCCAGAGTCCATCTGCGCACTGCTCAAGGAGCTCCATCAGCACTCCTCGTCGATGTTTaGGGTAATGACCCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: SARLSRVHLRTAQGAPSALLVDV*GNDPEG
Trigger: GCCTTCAGGGTCATTACCCCAAACATCGACGAGGAG...TGCTGATGGAGCTCCTTGAGCAGTGCGCAGATGGACTCTGGAAAGCCGAGCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCACACTCACGCTGCCCTaGAGTTTGAGCTGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTTLTLP*SLSCSL
Trigger: CAAACTGCAGCTCAAACTCCAGGGCAGCGTGAGTGT...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGCTTCCCAGGCACAAGTaGTCAGCCCCGCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GFGKHPEFANDKASPHTRLPRHK*SAPLAG
Trigger: CCCAGCCAGCGGGGCTGACCACTTGTGCCTGGGAAG...CCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442173.5
ENST00000630992.2
CDS-3UTR CCA 90 bp ACAGGCTGGTTGTTTTCAGATCTCAGTAGGCAAATGAGCTGCCATGGACTGGGACTTCCCAGGCACAAGTaGTCAGCCCCGCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: TGWLFSDLSRQMSCHGLGLPRHK*SAPLAG
Trigger: CCCAGCCAGCGGGGCTGACCACTTGTGCCTGGGAAG...TCCCAGTCCATGGCAGCTCATTTGCCTACTGAGATCTGAAAACAACCAGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCGCACAGGCATGCCAGTaGTCCAAGGAAGGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTAQACQ*SKEGKE
Trigger: TTCCTTTCCTTCCTTGGACCACTGGCATGCCTGTGC...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442173.5
ENST00000630992.2
CDS-3UTR CCA 90 bp GGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTGCGGAAAGGCCTGGCTaGTTTGGCAGATGGCATCAG +
Preference number: 4 (lower is better)
Translates to: GVTGIRDLYFRAWLRGFSAERPG*FGRWHQ
Trigger: CTGATGCCATCTGCCAAACCAGCCAGGCCTTTCCGC...ACTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp TCCTGCATCCCCACGTCTTCCATCATGGAGGCCTCCTCGTCGATGTTTGGGGTACTTCGCAGGCACTGTTaGGCATATGTATCGACCCTG +
Preference number: 4 (lower is better)
Translates to: SCIPTSSIMEASSSMFGVLRRHC*AYVSTL
Trigger: CAGGGTCGATACATATGCTCAACAGTGCCTGCGAAG...TACCCCAAACATCGACGAGGAGGCCTCCATGATGGAAGACGTGGGGATGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR TCA 90 bp CACACACGGGCCATGAGATGTAATCACACGACCGAAGACGAGCTGGTCATCCCGCTTCGCAGGCACTGTTaGGCATATGTATCGACCCTG +
Preference number: 4 (lower is better)
Translates to: HTRAMRCNHTTEDELVIPLRRHC*AYVSTL
Trigger: CAGGGTCGATACATATGCTCAACAGTGCCTGCGAAG...CGGGATGACCAGCTCGTCTTCGGTCGTGTGATTACATCTCATGGCCCGTGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGGCCAGCCATGCTTGGTaGTCCCACCCTTCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: GKHPEFANDKASPHTRAMASHAW*SHPSGN
Trigger: GTTCCCAGAAGGGTGGGATCACCAAGCATGGCTGGC...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp ATCCTGAGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGACCTCATGGTCACGCTaGTGGCACTGTTCATGTTGC +
Preference number: 4 (lower is better)
Translates to: ILRSHRHPGPLFQGMAEGTSWSR*WHCSCC
Trigger: GCAACATGAACAGTGCCATCAGCGTGACCATGAGGT...CCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCTCAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp CTGAGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGTTTTGCATGGCGGCTTCATaGAGGATGCCCTTGAGGACA +
Preference number: 4 (lower is better)
Translates to: LRSHRHPGPLFQGMAEGFCMAAS*RMPLRT
Trigger: TGTCCTCAAGGGCATCCTTCATGAAGCCGCCATGCA...AAACCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp TCTAAACACGCCTCCCCGGCTCCTCCTCAGGCAGGCGCTATGGCTGTGGGGGAGAGTCTGCAAGTAACTTaGGCATGTCATCATTGGATA +
Preference number: 4 (lower is better)
Translates to: SKHASPAPPQAGAMAVGESLQVT*ACHHWI
Trigger: TATCCAATGATGACATGCTCAAGTTACTTGCAGACT...CTCCCCCACAGCCATAGCGCCTGCCTGAGGAGGAGCCGGGGAGGCGTGTTTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR TCA 90 bp GTAGGCCCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCGCGTGCTTCCTTTACTTaGGTTGTCACAGCTGACATG +
Preference number: 4 (lower is better)
Translates to: VGPVQRVIQMGQPLKIPPRASFT*VVTADM
Trigger: CATGTCAGCTGTGACAACTCAAGTAAAGGAAGCACG...CGGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGGGCCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR TCA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCGTGGCTATCCTTGCCTaGTGGCTCCTTGAAGCATAT +
Preference number: 4 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTVAILA*WLLEAY
Trigger: ATATGCTTCAAGGAGCCATCAGGCAAGGATAGCCAC...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCAGAGATCGCCATTTTTaGCATGGATCCTGGCCATGC +
Preference number: 4 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTRDRHF*HGSWPC
Trigger: GCATGGCCAGGATCCATGTCAAAAATGGCGATCTCT...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GAGCAGCTGGGAGGCCTCCGTCCTGATGGAGCTCAGCTTGGAGTTACAGCACTTAGAGATCGCCATTTTTaGCATGGATCCTGGCCATGC +
Preference number: 4 (lower is better)
Translates to: EQLGGLRPDGAQLGVTALRDRHF*HGSWPC
Trigger: GCATGGCCAGGATCCATGTCAAAAATGGCGATCTCT...AAGTGCTGTAACTCCAAGCTGAGCTCCATCAGGACGGAGGCCTCCCAGCTGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR TCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTTGCGGCCCGAGTGCATaGCCTCGGTCACTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFCGPSA*PRSLCC
Trigger: ACAGCAAAGTGACCGAGGTCATGCACTCGGGCCGCA...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GTAGGCCCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCGTTTCCGACAGCGGTGTaGGTTTGGGTTCCTTGTAAA +
Preference number: 4 (lower is better)
Translates to: VGPVQRVIQMGQPLKIPPFPTAV*VWVPCK
Trigger: TTTACAAGGAACCCAAACTCACACCGCTGTCGGAAA...CGGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGGGCCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp GGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGGGCCAGCATTGACCTaGACACTCACGCTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GFGKHPEFANDKASPHTRGPALT*TLTLPW
Trigger: CCAGGGCAGCGTGAGTGTTCAGGTCAATGCTGGCCC...CCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TGGGAGGCCTCCGTCCTGATGGAGCTCAGCTTGGAGTTACAGCACTTGAGAATCAGGACAGATGGGCTCTaGCCACTGCCATTCATCAGC +
Preference number: 4 (lower is better)
Translates to: WEASVLMELSLELQHLRIRTDGL*PLPFIS
Trigger: GCTGATGAATGGCAGTGGGCAGAGCCCATCTGTCCT...GATTCTCAAGTGCTGTAACTCCAAGCTGAGCTCCATCAGGACGGAGGCCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp GCTTCTTCACATAAGGGAAGCAGTGTATGGCTGTCAGGATGGTGCGCCGTTTGCCCGGACCATAATGCCTaGCCATCCCAAGCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: ASSHKGSSVWLSGWCAVCPDHNA*PSQAPG
Trigger: ACCAGGAGCTTGGGATGGGCAGGCATTATGGTCCGG...GCAAACGGCGCACCATCCTGACAGCCATACACTGCTTCCCTTATGTGAAGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR GCA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGGGTGCTTCCCTTCTaGGGCGTCACCAGCGGATTC +
Preference number: 4 (lower is better)
Translates to: GKHPEFANDKASPHTRAMRVLPF*GVTSGF
Trigger: GAATCCGCTGGTGACGCCGCAGAAGGGAAGCACCCT...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GTTCCCTTAGGACTGCTGAACAATAAACACCCAGCAGCCACCCCAAATGGTCAGGGCTGTTGTCCAGGGTaGTTCCCTTCTGCGGCGTCA +
Preference number: 4 (lower is better)
Translates to: VPLGLLNNKHPAATPNGQGCCPG*FPSAAS
Trigger: TGACGCCGCAGAAGGGAAGCACCCTGGACAACAGCC...CTGACCATTTGGGGTGGCTGCTGGGTGTTTATTGTTCAGCAGTCCTAAGGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448493.7
CDS-3UTR GCA 90 bp CACACACGGGCCATGAGATGTAATCACACGACCGAAGACGAGCTGGTCATCCCGTATATGGAGAAGCAATaGCGGAGATGGCGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: HTRAMRCNHTTEDELVIPYMEKQ*RRWRPA
Trigger: TGCTGGGCGCCATCTCCGGCATTGCTTCTCCATATA...CGGGATGACCAGCTCGTCTTCGGTCGTGTGATTACATCTCATGGCCCGTGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376460.5
ENST00000652315.1
CDS-3UTR GCA 90 bp TCCTGCATCCCCACGTCTTCCATCATGGAGGCCTCCTCGTCGATGTTTGGGGTATTTCCAGAGTCCATCTaGGCACTGCTCAAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: SCIPTSSIMEASSSMFGVFPESI*ALLKEL
Trigger: GAGCTCCTTGAGCAGTGCGCAGATGGACTCTGGAAA...TACCCCAAACATCGACGAGGAGGCCTCCATGATGGAAGACGTGGGGATGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp GTTCCCTTAGGACTGCTGAACAATAAACACCCAGCAGCCACCCCAAATGGTCAGAGCCTGCGGCCCGAGTaGATGACCTCGGTCACTTTG +
Preference number: 4 (lower is better)
Translates to: VPLGLLNNKHPAATPNGQSLRPE*MTSVTL
Trigger: CAAAGTGACCGAGGTCATGCACTCGGGCCGCAGGCT...CTGACCATTTGGGGTGGCTGCTGGGTGTTTATTGTTCAGCAGTCCTAAGGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448493.7
CDS-3UTR GCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTAGCCTGCGGCCCGAGTaGATGACCTCGGTCACTTTG +
Preference number: 4 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFSLRPE*MTSVTL
Trigger: CAAAGTGACCGAGGTCATGCACTCGGGCCGCAGGCT...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp CCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATAGGGCCCGGGCTCTCTaGTTCCACTTCGCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: PEFANDKASPHTRAMRCNRARAL*FHFALS
Trigger: GCTCAGGGCGAAGTGGAAGCAGAGAGCCCGGGCCCT...ATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
CDS-3UTR GCA 90 bp GGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGGCCCGGGCTCTCTaGTTCCACTTCGCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: GPLFQGMAEGFQLLTITSRARAL*FHFALS
Trigger: GCTCAGGGCGAAGTGGAAGCAGAGAGCCCGGGCCCT...GCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp CCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATGTGCGCCGTTTGCACTaGTCTTCCACCCCGCCCTGC +
Preference number: 4 (lower is better)
Translates to: PEFANDKASPHTRAMRCNVRRLH*SSTPPC
Trigger: GCAGGGCGGGGTGGAAGAGCAGTGCAAACGGCGCAC...ATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGGGATGGTGCGCCGTTTaGACTGCTCTTCCACCCCGC +
Preference number: 4 (lower is better)
Translates to: ALESILSLQMTKQVPTHGGWCAV*TALPPR
Trigger: GCGGGGTGGAAGAGCAGTGCAAACGGCGCACCATCC...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACGCCGAGGAGCACAGCTaGCGGAGCTCCGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: VIGFGKHPEFANDKASPHAEEHS*RSSATF
Trigger: GAAGGTGGCGGAGCTCCGGCAGCTGTGCTCCTCGGC...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GCTTCTTCACATAAGGGAAGCAGTGTATGGCTGTCAGGATGGTGCGCCGTTTGCCCTTGGTCCTCCCTGTaGTCGGTCTCCCCAGTGATT +
Preference number: 4 (lower is better)
Translates to: ASSHKGSSVWLSGWCAVCPWSSL*SVSPVI
Trigger: AATCACTGGGGAGACCGAGCACAGGGAGGACCAAGG...GCAAACGGCGCACCATCCTGACAGCCATACACTGCTTCCCTTATGTGAAGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR GCA 90 bp AATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACACGCCAGGCCGCGCCCTCTaGACCGTGTCACGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: NTQESNLDFKVLPHKCDTPGRAL*TVSRPK
Trigger: CTTGGGGCGTGACACGGTGCAGAGGGCGCGGCCTGG...CGTGTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427887.2
CDS-3UTR GCA 90 bp AAGAATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACGCTGCGACATCCTCCTaGCCCCGCCGCCTCCGCCTC +
Preference number: 4 (lower is better)
Translates to: KNTQESNLDFKVLPHKCDAATSS*PRRLRL
Trigger: GAGGCGGAGGCGGCGGGGGCAGGAGGATGTCGCAGC...GTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427887.2
CDS-3UTR GCA 90 bp CTGAGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGTTTTTGTCAGCCAGTGGCTaGGTCTCCCCAGGAGAGAAA +
Preference number: 4 (lower is better)
Translates to: LRSHRHPGPLFQGMAEGFLSASG*VSPGEK
Trigger: TTTCTCTCCTGGGGAGACGCAGCCACTGGCTGACAA...AAACCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp CCGAAGGAAGGTTCGCCGAGACCGGGATGTGCTGCTCGCTTGTCACCACCCTTCTGCCTCACTGAGAAATaGTTCAGGTCTACGTGGAAA +
Preference number: 4 (lower is better)
Translates to: PKEGSPRPGCAARLSPPFCLTEK*FRSTWK
Trigger: TTTCCACGTAGACCTGAACCATTTCTCAGTGAGGCA...GAAGGGTGGTGACAAGCGAGCAGCACATCCCGGTCTCGGCGAACCTTCCTTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp GGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCGCGCCGGGGACGTGGTaGCGAGCATTTGCCTCACTG +
Preference number: 4 (lower is better)
Translates to: GPLFQGMAEGFQLLTITSAPGTW*RAFASL
Trigger: CAGTGAGGCAAATGCTCGCCACCACGTCCCCGGCGC...GCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp AGAGCATGGAGCGTTACCAATGCCGGAGATGGCGCCCAGCAGGTCCTTGTGCAGTTCTTCAGCACCTTCTaGGCCACCTTAGAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: RAWSVTNAGDGAQQVLVQFFSTF*ATLEES
Trigger: AGACTCTTCTAAGGTGGCCCAGAAGGTGCTGAAGAA...CTGCACAAGGACCTGCTGGGCGCCATCTCCGGCATTGGTAACGCTCCATGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp GAAGTAGAGCAGCTGGGAGGCCTCCGTCCTGATGGAGCTCAGCTTGGAGTTACAAAGGCGATCATCACGTaGCCTTCCATCGCATGCAGA +
Preference number: 4 (lower is better)
Translates to: EVEQLGGLRPDGAQLGVTKAIIT*PSIACR
Trigger: TCTGCATGCGATGGAAGGCCACGTGATGATCGCCTT...TGTAACTCCAAGCTGAGCTCCATCAGGACGGAGGCCTCCCAGCTGCTCTACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp GCGGCCCGAGTGCATGACCTCGGTCACTTTGCTGTAGGCCCGGTGCAGCGTGTCGTTCTTAGATGCCTCTaGATTATCTCGAAACTTCTG +
Preference number: 4 (lower is better)
Translates to: AARVHDLGHFAVGPVQRVVLRCL*IISKLL
Trigger: CAGAAGTTTCGAGATAATCCAGAGGCATCTAAGAAC...GACACGCTGCACCGGGCCTACAGCAAAGTGACCGAGGTCATGCACTCGGGCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp TGGCTGTGGGGGAGAAGGGGCGGCTCCCACTGGACTGCTTCTTTCCGTGTGAGATTCAAAGAGGGTCTTTaGGTCTCCAGGAGCAAAACA +
Preference number: 4 (lower is better)
Translates to: WLWGRRGGSHWTASFRVRFKEGL*VSRSKT
Trigger: TGTTTTGCTCCTGGAGACCCAAAGACCCTCTTTGAA...TCTCACACGGAAAGAAGCAGTCCAGTGGGAGCCGCCCCTTCTCCCCCACAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR CCA 90 bp GTTACAGCACTTGAGAATCTCGTAACACAGAGCCGCACACATGTCCGCTCTCCCAAGCAATGCCGGAGATaGCGCCCAGCAGGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: VTALENLVTQSRTHVRSPKQCRR*RPAGPC
Trigger: ACAAGGACCTGCTGGGCGCCATCTCCGGCATTGCTT...GGGAGAGCGGACATGTGTGCGGCTCTGTGTTACGAGATTCTCAAGTGCTGTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR CCA 90 bp TGTTGGCTTCAAGTAATGACTGGTGCAGAACATCTGCGTCCGAGTGGCCATAGCAGGGGCGGCTCCCACTaGACTGCTTCTTTCCGTGTG +
Preference number: 4 (lower is better)
Translates to: CWLQVMTGAEHLRPSGHSRGGSH*TASFRV
Trigger: CACACGGAAAGAAGCAGTCCAGTGGGAGCCGCCCCT...GCTATGGCCACTCGGACGCAGATGTTCTGCACCAGTCATTACTTGAAGCCAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR CCA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGGGGCGGCTCCCACTaGACTGCTTCTTTCCGTGTG +
Preference number: 4 (lower is better)
Translates to: GKHPEFANDKASPHTRAMRGGSH*TASFRV
Trigger: CACACGGAAAGAAGCAGTCCAGTGGGAGCCGCCCCT...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000652315.1
CDS-3UTR CCA 90 bp CCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATCTCAGGCAGGCGCTATaGCTGTGGGGGAGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: PEFANDKASPHTRAMRCNLRQAL*LWGRRG
Trigger: GCCCCTTCTCCCCCACAGCCATAGCGCCTGCCTGAG...ATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000652315.1
CDS-3UTR CCA 90 bp TGTAGGCCCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCACATCCTCGTTGAAATaGACATCCTGCATCCCCACG +
Preference number: 4 (lower is better)
Translates to: CRPGAACHTDGPASQNPSTSSLK*TSCIPT
Trigger: CGTGGGGATGCAGGATGTCCATTTCAACGAGGATGT...GGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGGGCCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCCCCGGTCTGCGTAAATaGCATCTCAAACATGAAGCG +
Preference number: 4 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTPGLRK*HLKHEA
Trigger: CGCTTCATGTTTGAGATGCCATTTACGCAGACCGGG...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTGTATGGCTGTCAGGATaGTGCGCCGTTTGCACTGCT +
Preference number: 4 (lower is better)
Translates to: GVTGIRDLYFRAWLRGFSVWLSG*CAVCTA
Trigger: AGCAGTGCAAACGGCGCACCATCCTGACAGCCATAC...ACTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp ATCCTGAGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGAAGCCCACAAGAGCATaGAGCGTTACCAATGCCGGA +
Preference number: 4 (lower is better)
Translates to: ILRSHRHPGPLFQGMAEGKPTRA*SVTNAG
Trigger: TCCGGCATTGGTAACGCTCCATGCTCTTGTGGGCTT...CCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCTCAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp TCCTGCATCCCCACGTCTTCCATCATGGAGGCCTCCTCGTCGATGTTTGGGGTAAAGCCCACAAGAGCATaGAGCGTTACCAATGCCGGA +
Preference number: 4 (lower is better)
Translates to: SCIPTSSIMEASSSMFGVKPTRA*SVTNAG
Trigger: TCCGGCATTGGTAACGCTCCATGCTCTTGTGGGCTT...TACCCCAAACATCGACGAGGAGGCCTCCATGATGGAAGACGTGGGGATGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp CTGGAATCTGGTTCCCCCAATGCCAACAACGTCTGCTATCAGCTGGCTGACAGATCCAGCGGAAAGGCCTaGCTGGTTTGGCAGATGGCA +
Preference number: 4 (lower is better)
Translates to: LESGSPNANNVCYQLADRSSGKA*LVWQMA
Trigger: TGCCATCTGCCAAACCAGCCAGGCCTTTCCGCTGGA...TCTGTCAGCCAGCTGATAGCAGACGTTGTTGGCATTGGGGGAACCAGATTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp CCGAAGGAAGGTTCGCCGAGACCGGGATGTGCTGCTCGCTTGTCACCACCCTTCAAACTTCTCTTCAAATaGCTTCACTTCTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: PKEGSPRPGCAARLSPPFKLLFK*LHFWLS
Trigger: GCTGAGCCAGAAGTGAAGTCATTTGAAGAGAAGTTT...GAAGGGTGGTGACAAGCGAGCAGCACATCCCGGTCTCGGCGAACCTTCCTTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp CTTCAAGTAATGACTGGTGCAGAACATCTGCGTCCGAGTGGCCATAGCTGTGGTCATGAAGGATGCCCTTaGGGACAGATGGGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: LQVMTGAEHLRPSGHSCGHEGCP*GQMGSA
Trigger: GGCAGAGCCCATCTGTCCTCAAGGGCATCCTTCATG...ACCACAGCTATGGCCACTCGGACGCAGATGTTCTGCACCAGTCATTACTTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR TCA 90 bp GCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATCACACGACCCATGAAGGATGCCCTTaGGGACAGATGGGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: ANDKASPHTRAMRCNHTTHEGCP*GQMGSA
Trigger: GGCAGAGCCCATCTGTCCTCAAGGGCATCCTTCATG...GGTCGTGTGATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GGCCCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCGCTTTGTGTGATGCTCCCCTaGAGGACTTTTTCAATTCTG +
Preference number: 4 (lower is better)
Translates to: GPVQRVIQMGQPLKIPPLCVMLP*RTFSIL
Trigger: CAGAATTGAAAAAGTCCTTCAGGGGAGCATCACACA...AAGCGGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR TCA 90 bp AGAGCATGGAGCGTTACCAATGCCGGAGATGGCGCCCAGCAGGTCCTTGTGCAGTGTGTGATGCTCCCCTaGAGGACTTTTTCAATTCTG +
Preference number: 4 (lower is better)
Translates to: RAWSVTNAGDGAQQVLVQCVMLP*RTFSIL
Trigger: CAGAATTGAAAAAGTCCTTCAGGGGAGCATCACACA...CTGCACAAGGACCTGCTGGGCGCCATCTCCGGCATTGGTAACGCTCCATGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp CTCGGCTTTCCAGAGTCCATCTGCGCACTGCTCAAGGAGCTCCATCAGCACATCCCTCCACTTCAAACGTaGTGGGAGTTTTACTGCAGG +
Preference number: 4 (lower is better)
Translates to: LGFPESICALLKELHQHIPPLQT*WEFYCR
Trigger: CCTGCAGTAAAACTCCCATCACGTTTGAAGTGGAGG...GATGTGCTGATGGAGCTCCTTGAGCAGTGCGCAGATGGACTCTGGAAAGCCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR TCA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCATGCACTTAAGGGGCTaGGAGTCTTCCTCATCTGAA +
Preference number: 4 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTMHLRG*ESSSSE
Trigger: TTCAGATGAGGAAGACTCTCAGCCCCTTAAGTGCAT...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000652315.1
CDS-3UTR TCA 90 bp GAGCAGCTGGGAGGCCTCCGTCCTGATGGAGCTCAGCTTGGAGTTACAGCACTTCGCGTACTTAACATATaGCCTCAAGTGGCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: EQLGGLRPDGAQLGVTALRVLNI*PQVALQ
Trigger: TTGGAGAGCCACTTGAGGTCATATGTTAAGTACGCG...AAGTGCTGTAACTCCAAGCTGAGCTCCATCAGGACGGAGGCCTCCCAGCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR TCA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCAATCGGCAGAAGGCTTaGGAATCGTGGTCATGGATT +
Preference number: 4 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTNRQKA*ESWSWI
Trigger: AATCCATGACCACGATTCTCAAGCCTTCTGCCGATT...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GAGCAGCTGGGAGGCCTCCGTCCTGATGGAGCTCAGCTTGGAGTTACAGCACTTAAGACAGCAAGGCTATaGTTCGCGTTCTTAGATGCC +
Preference number: 4 (lower is better)
Translates to: EQLGGLRPDGAQLGVTALKTARL*FAFLDA
Trigger: GGCATCTAAGAACGCGAATCATAGCCTTGCTGTCTT...AAGTGCTGTAACTCCAAGCTGAGCTCCATCAGGACGGAGGCCTCCCAGCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR TCA 90 bp GTAGGTCCCCAGAAGCCTGCGGCCCGAGTGCATGACCTCGGTCACTTTGCTGTATGCCTGATGGCTCCTTaGAGCATATCTGTCATCAAA +
Preference number: 4 (lower is better)
Translates to: VGPQKPAARVHDLGHFAVCLMAP*SISVIK
Trigger: TTTGATGACAGATATGCTTCAAGGAGCCATCAGGCA...TACAGCAAAGTGACCGAGGTCATGCACTCGGGCCGCAGGCTTCTGGGGACCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR TCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTTGTAGATGTCGGCGATaGGCTCGTAGCGCTCGGCTT +
Preference number: 4 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFCRCRR*ARSARL
Trigger: AAGCCGAGCGCTACGAGCTCATCGCCGACATCTACA...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCTGCGGCCCGAGTGCATaGCCTCGGTCACTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRACGPSA*PRSLCC
Trigger: ACAGCAAAGTGACCGAGGTCATGCACTCGGGCCGCA...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTCCGACAGCGGTGTaGGTTTGGGTTCCTTGTAAA +
Preference number: 4 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTFPTAV*VWVPCK
Trigger: TTTACAAGGAACCCAAACTCACACCGCTGTCGGAAA...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGCCCACACACGGGCCATaGGATGTAATCACACGACCG +
Preference number: 4 (lower is better)
Translates to: GKHPEFANDKASPHTRAMPTHGP*DVITRP
Trigger: CGGTCGTGTGATTACATCTCATGGCCCGTGTGTGGG...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp ATCCTGAGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGCAGGTCTTAAGGGGCTaGGAGTCTTCCTCATCTGAA +
Preference number: 4 (lower is better)
Translates to: ILRSHRHPGPLFQGMAEGQVLRG*ESSSSE
Trigger: TTCAGATGAGGAAGACTCTCAGCCCCTTAAGACCTG...CCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCTCAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp GTAGGCCCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCGTTCCCTTGGTACCACTaGGTAGGTGGAAAAAGAAAC +
Preference number: 4 (lower is better)
Translates to: VGPVQRVIQMGQPLKIPPFPWYH*VGGKRN
Trigger: GTTTCTTTTTCCACCTACTCAGTGGTACCAAGGGAA...CGGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGGGCCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp GTAGGCCCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCGTTGAAGACATATTTGTaGAGCTGGGTATTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: VGPVQRVIQMGQPLKIPPLKTYL*SWVFGG
Trigger: GCCCCCAAATACCCAGCTTCACAAATATGTCTTCAA...CGGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGGGCCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR GCA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCGATTTCTGCTTCTCTTaGACTCTTGGCAAGTTCCGG +
Preference number: 4 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTDFCFS*TLGKFR
Trigger: CCGGAACTTGCCAAGAGTGCAAGAGAAGCAGAAATC...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp CTCGGCTTTCCAGAGTCCATCTGCGCACTGCTCAAGGAGCTCCATCAGCACATCAGTCTTTGGCATGCCTaGTTGGCATTCTTCAGCACC +
Preference number: 4 (lower is better)
Translates to: LGFPESICALLKELHQHISLWHA*LAFFST
Trigger: GGTGCTGAAGAATGCCAAGCAGGCATGCCAAAGACT...GATGTGCTGATGGAGCTCCTTGAGCAGTGCGCAGATGGACTCTGGAAAGCCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp GGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCGCCGAGACCGGGATGTaGTGCTCGCTTGTCACCACC +
Preference number: 4 (lower is better)
Translates to: GPLFQGMAEGFQLLTITSAETGM*CSLVTT
Trigger: GGTGGTGACAAGCGAGCAGCACATCCCGGTCTCGGC...GCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCGGCTGTTGTCCAGGGTaGTTCCCTTCTGCGGCGTCA +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRAGCCPG*FPSAAS
Trigger: TGACGCCGCAGAAGGGAAGCACCCTGGACAACAGCC...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGGCTGTTGTCCAGGGTaGTTCCCTTCTGCGGCGTCA +
Preference number: 4 (lower is better)
Translates to: GFGKHPEFANDKASPHTRGCCPG*FPSAAS
Trigger: TGACGCCGCAGAAGGGAAGCACCCTGGACAACAGCC...CCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGTCCAGGCTGCCCAGCTaGTGCAATCTGGCATGCATC +
Preference number: 4 (lower is better)
Translates to: GKHPEFANDKASPHTRAMSRLPS*CNLACI
Trigger: GATGCATGCCAGATTGCAGCAGCTGGGCAGCCTGGA...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000652315.1
CDS-3UTR GCA 90 bp CCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCGCTTCTCAATGCCAACAACGTCTaGTATCAGCTGGCTGACAGA +
Preference number: 4 (lower is better)
Translates to: PVQRVIQMGQPLKIPPLLNANNV*YQLADR
Trigger: TCTGTCAGCCAGCTGATAGCAGACGTTGTTGGCATT...GAGAAGCGGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp ATGACCCTGAAGGCGGTGCATCCTTGTCTAAACACGCCTCCCCGGCTCCTCCTCTGGCCATTAGCACCGTaGGTATCCTTTTGGTTAAGT +
Preference number: 4 (lower is better)
Translates to: MTLKAVHPCLNTPPRLLLWPLAP*VSFWLS
Trigger: ACTTAACCAAAAGGATACGCACGGTGCTAATGGCCA...GAGGAGGAGCCGGGGAGGCGTGTTTAGACAAGGATGCACCGCCTTCAGGGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR GCA 90 bp CTGGAATCTGGTTCCCCCAATGCCAACAACGTCTGCTATCAGCTGGCTGACAGATCTGGGTCGTTCTCATaGTCCTTCATCTGGGCGGTG +
Preference number: 4 (lower is better)
Translates to: LESGSPNANNVCYQLADRSGSFS*SFIWAV
Trigger: CACCGCCCAGATGAAGGAGCATGAGAACGACCCAGA...TCTGTCAGCCAGCTGATAGCAGACGTTGTTGGCATTGGGGGAACCAGATTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGCATGGATCCTGGCCATaGTGTCGAGCCACGTCTTCC +
Preference number: 4 (lower is better)
Translates to: GKHPEFANDKASPHTRAMHGSWP*CRATSS
Trigger: GGAAGACGTGGCTCGACAGCATGGCCAGGATCCATG...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACAGGGCCCGGGCTCTCTaGTTCCACTTCGCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: VIGFGKHPEFANDKASPHRARAL*FHFALS
Trigger: GCTCAGGGCGAAGTGGAAGCAGAGAGCCCGGGCCCT...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
CDS-3UTR GCA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCCATCCCAGCTGCTCATaGATGATTTCAGAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTHPSCS*MISESS
Trigger: GGAGCTTTCTGAAATCATGCATGAGCAGCTGGGATG...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376460.5
ENST00000652315.1
CDS-3UTR GCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTCAGTGCAGCCCTCCCTaGCATGTAGATCCCAGAACC +
Preference number: 4 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFQCSPP*HVDPRT
Trigger: GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTG...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GTCAGTGCGGAGCAATTGGAGGCTATGATGCTAAAGATCCCCAGTGGCCTATCTCAGTGCAGCCCTCCCTaGCATGTAGATCCCAGAACC +
Preference number: 4 (lower is better)
Translates to: VSAEQLEAMMLKIPSGLSQCSPP*HVDPRT
Trigger: GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTG...AGATAGGCCACTGGGGATCTTTAGCATCATAGCCTCCAATTGCTCCGCACTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR GCA 90 bp TGTTGGCTTCAAGTAATGACTGGTGCAGAACATCTGCGTCCGAGTGGCCATAGCCTGGTGCAGAACATCTaGGTCCGAGTGGCCATAGCC +
Preference number: 4 (lower is better)
Translates to: CWLQVMTGAEHLRPSGHSLVQNI*VRVAIA
Trigger: GGCTATGGCCACTCGGACGCAGATGTTCTGCACCAG...GCTATGGCCACTCGGACGCAGATGTTCTGCACCAGTCATTACTTGAAGCCAACA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR GCA 90 bp ACAGAGCCGCACACATGTCCGCTCTCCCTTCATAGAATGTTGAGGGAAACTTATGGAAGGTCCCCTCCCTaGTTCTGGAGCAGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: TEPHTCPLSLHRMLRETYGRSPP*FWSSGW
Trigger: CCAGCCACTGCTCCAGAAGCAGGGAGGGGACCTTCC...ATAAGTTTCCCTCAACATTCTATGAAGGGAGAGCGGACATGTGTGCGGCTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR GCA 90 bp GCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATCACACGACCCTGAACCAAAAGGCGTaGCTCCAGCGGAAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: ANDKASPHTRAMRCNHTTLNQKA*LQRKGL
Trigger: CAGGCCTTTCCGCTGGAGGCACGCCTTTTGGTTCAG...GGTCGTGTGATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp AGGGACTGCTGGAATCTGGTTCCCCCAATGCCAACAACGTCTGCTATCAGCTGGAGCAGTCACCGGTACTaGAACAGAAGGGAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: RDCWNLVPPMPTTSAISWSSHRY*NRREAL
Trigger: CAGAGCTTCCCTTCTGTTCCAGTACCGGTGACTGCT...CCAGCTGATAGCAGACGTTGTTGGCATTGGGGGAACCAGATTCCAGCAGTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR CCA 90 bp TGGGAGGCCTCCGTCCTGATGGAGCTCAGCTTGGAGTTACAGCACTTGAGAATCCTTCTCTTGCACTCTTaGCAAGTTCCGGCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: WEASVLMELSLELQHLRILLLHS*QVPAGS
Trigger: GCTACCTGCCGGAACTTGCCAAGAGTGCAAGAGAAG...GATTCTCAAGTGCTGTAACTCCAAGCTGAGCTCCATCAGGACGGAGGCCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp CCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATTCAGCGCCGGGGACGTaGTGGCGAGCATTTGCCTCA +
Preference number: 4 (lower is better)
Translates to: PEFANDKASPHTRAMRCNSAPGT*WRAFAS
Trigger: TGAGGCAAATGCTCGCCACCACGTCCCCGGCGCTGA...ATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTCTTCAGCACCTTCTaGGCCACCTTAGAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTFFSTF*ATLEES
Trigger: AGACTCTTCTAAGGTGGCCCAGAAGGTGCTGAAGAA...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTGGCATGCCTGCTTaGCATTCTTCAGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTFGMPA*HSSAPS
Trigger: AGAAGGTGCTGAAGAATGCCAAGCAGGCATGCCAAA...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GTAGGTCCCCAGAAGCCTGCGGCCCGAGTGCATGACCTCGGTCACTTTGCTGTAAGGCTGAGTGTGTTTTaGTATGCAGGGCACAAATTC +
Preference number: 4 (lower is better)
Translates to: VGPQKPAARVHDLGHFAVRLSVF*YAGHKF
Trigger: GAATTTGTGCCCTGCATACCAAAACACACTCAGCCT...TACAGCAAAGTGACCGAGGTCATGCACTCGGGCCGCAGGCTTCTGGGGACCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp CACACACGGGCCATGAGATGTAATCACACGACCGAAGACGAGCTGGTCATCCCGGCTTCTTGTGAAAACTaGCCCACCAGGTCTGCCATA +
Preference number: 4 (lower is better)
Translates to: HTRAMRCNHTTEDELVIPASCEN*PTRSAI
Trigger: TATGGCAGACCTGGTGGGCCAGTTTTCACAAGAAGC...CGGGATGACCAGCTCGTCTTCGGTCGTGTGATTACATCTCATGGCCCGTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376460.5
ENST00000652315.1
CDS-3UTR CCA 90 bp AGAGCATGGAGCGTTACCAATGCCGGAGATGGCGCCCAGCAGGTCCTTGTGCAGTTCAGAGGCAACATATaGCTCAGCCTTATACGCGTA +
Preference number: 4 (lower is better)
Translates to: RAWSVTNAGDGAQQVLVQFRGNI*LSLIRV
Trigger: TACGCGTATAAGGCTGAGCCATATGTTGCCTCTGAA...CTGCACAAGGACCTGCTGGGCGCCATCTCCGGCATTGGTAACGCTCCATGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAAGCAATGCCGGAGATaGCGCCCAGCAGGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: GKHPEFANDKASPHTRAMKQCRR*RPAGPC
Trigger: ACAAGGACCTGCTGGGCGCCATCTCCGGCATTGCTT...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000652315.1
CDS-3UTR CCA 90 bp GTTCCCTTAGGACTGCTGAACAATAAACACCCAGCAGCCACCCCAAATGGTCAGAAGCAATGCCGGAGATaGCGCCCAGCAGGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: VPLGLLNNKHPAATPNGQKQCRR*RPAGPC
Trigger: ACAAGGACCTGCTGGGCGCCATCTCCGGCATTGCTT...CTGACCATTTGGGGTGGCTGCTGGGTGTTTATTGTTCAGCAGTCCTAAGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448493.7
CDS-3UTR CCA 90 bp GTAGGCCCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCGACGTCTGCTATCAGCTaGCTGACAGATATGATGACT +
Preference number: 4 (lower is better)
Translates to: VGPVQRVIQMGQPLKIPPTSAIS*LTDMMT
Trigger: AGTCATCATATCTGTCAGCCAGCTGATAGCAGACGT...CGGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGGGCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp CTTTCCAGAGTCCATCTGCGCACTGCTCAAGGAGCTCCATCAGCACATCCTCGTGGGACTGCTGGAATCTaGTTCCCCCAATGCCAACAA +
Preference number: 4 (lower is better)
Translates to: LSRVHLRTAQGAPSAHPRGTAGI*FPQCQQ
Trigger: TTGTTGGCATTGGGGGAACCAGATTCCAGCAGTCCC...ACGAGGATGTGCTGATGGAGCTCCTTGAGCAGTGCGCAGATGGACTCTGGAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp GGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTGGGACTGCTGGAATCTaGTTCCCCCAATGCCAACAA +
Preference number: 4 (lower is better)
Translates to: GVTGIRDLYFRAWLRGFSGTAGI*FPQCQQ
Trigger: TTGTTGGCATTGGGGGAACCAGATTCCAGCAGTCCC...ACTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGCCTTCATCTGGGCGGTaGCCATTAGCACCGTGCGTA +
Preference number: 4 (lower is better)
Translates to: GKHPEFANDKASPHTRAMPSSGR*PLAPCV
Trigger: TACGCACGGTGCTAATGGCCACCGCCCAGATGAAGG...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCAGGGGCGGCTCCCACTaGACTGCTTCTTTCCGTGTG +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRARGGSH*TASFRV
Trigger: CACACGGAAAGAAGCAGTCCAGTGGGAGCCGCCCCT...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000652315.1
CDS-3UTR CCA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCGCATCATTCCTGTTCTaGCTATGTATCGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTASFLF*LCIASP
Trigger: TGGGGAAGCGATACATAGCCAGAACAGGAATGATGC...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000652315.1
CDS-3UTR CCA 90 bp TCCTGCATCCCCACGTCTTCCATCATGGAGGCCTCCTCGTCGATGTTTGGGGTACCCGGTCTGCGTAAATaGCATCTCAAACATGAAGCG +
Preference number: 4 (lower is better)
Translates to: SCIPTSSIMEASSSMFGVPGLRK*HLKHEA
Trigger: CGCTTCATGTTTGAGATGCCATTTACGCAGACCGGG...TACCCCAAACATCGACGAGGAGGCCTCCATGATGGAAGACGTGGGGATGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTGTTCATCATCTTCGTaGGAGTCGCCATTTCGCTTT +
Preference number: 4 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTCSSSS*ESPFRF
Trigger: AAAGCGAAATGGCGACTCTCACGAAGATGATGAACA...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCATGAAGGATGCCCTTaGGGACAGATGGGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: ALESILSLQMTKQVPTHGHEGCP*GQMGSA
Trigger: GGCAGAGCCCATCTGTCCTCAAGGGCATCCTTCATG...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTGCTCAGCGCAATGTGTaGTGCTCCCCTGAAGGACTT +
Preference number: 4 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFAQRNV*CSPEGL
Trigger: AAGTCCTTCAGGGGAGCATCACACATTGCGCTGAGC...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTCCTCCACTTCAAACGTaGTGGGAGTTTTACTGCAGG +
Preference number: 4 (lower is better)
Translates to: GVTGIRDLYFRAWLRGFSPPLQT*WEFYCR
Trigger: CCTGCAGTAAAACTCCCATCACGTTTGAAGTGGAGG...ACTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGCAAAGGCGCTTCTTGTaGAAACTGGCCCACCAGGTC +
Preference number: 4 (lower is better)
Translates to: GKHPEFANDKASPHTRAMQRRFL*KLAHQV
Trigger: GACCTGGTGGGCCAGTTTTCACAAGAAGCGCCTTTG...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp CACACACGGGCCATGAGATGTAATCACACGACCGAAGACGAGCTGGTCATCCCGCGTGCTTCCTTTACTTaGGTTGTCACAGCTGACATG +
Preference number: 4 (lower is better)
Translates to: HTRAMRCNHTTEDELVIPRASFT*VVTADM
Trigger: CATGTCAGCTGTGACAACTCAAGTAAAGGAAGCACG...CGGGATGACCAGCTCGTCTTCGGTCGTGTGATTACATCTCATGGCCCGTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp CTGGAATCTGGTTCCCCCAATGCCAACAACGTCTGCTATCAGCTGGCTGACAGACACTGGGCAACCACATaGATAATGACCCGAGTCACG +
Preference number: 4 (lower is better)
Translates to: LESGSPNANNVCYQLADRHWATT*IMTRVT
Trigger: CGTGACTCGGGTCATTATTCATGTGGTTGCCCAGTG...TCTGTCAGCCAGCTGATAGCAGACGTTGTTGGCATTGGGGGAACCAGATTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR TCA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTGCCTGATGGCTCCTTaGAGCATATCTGTCATCAAA +
Preference number: 4 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTCLMAP*SISVIK
Trigger: TTTGATGACAGATATGCTTCAAGGAGCCATCAGGCA...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp ATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGAGCCACGTCTTCCTaGGCTCGGGCGTGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: IGFGKHPEFANDKASPHTRATSS*ARACWH
Trigger: ATGCCAGCACGCCCGAGCTCAGGAAGACGTGGCTCG...TGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TGGTTCTTAAACGCCAATGTAAATAGAGAAAGCGTGTCCAGAGCTGTCAGGCAACGAGCCACGTCTTCCTaGGCTCGGGCGTGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: WFLNANVNRESVSRAVRQRATSS*ARACWH
Trigger: ATGCCAGCACGCCCGAGCTCAGGAAGACGTGGCTCG...TTGCCTGACAGCTCTGGACACGCTTTCTCTATTTACATTGGCGTTTAAGAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR TCA 90 bp GGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGTGTAGATGTCGGCGATaGGCTCGTAGCGCTCGGCTT +
Preference number: 4 (lower is better)
Translates to: GFGKHPEFANDKASPHTRCRCRR*ARSARL
Trigger: AAGCCGAGCGCTACGAGCTCATCGCCGACATCTACA...CCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp CACACACGGGCCATGAGATGTAATCACACGACCGAAGACGAGCTGGTCATCCCGTTTCCGACAGCGGTGTaGGTTTGGGTTCCTTGTAAA +
Preference number: 4 (lower is better)
Translates to: HTRAMRCNHTTEDELVIPFPTAV*VWVPCK
Trigger: TTTACAAGGAACCCAAACTCACACCGCTGTCGGAAA...CGGGATGACCAGCTCGTCTTCGGTCGTGTGATTACATCTCATGGCCCGTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCGCTTTCATTTCTTCCTaGTACTCGAGCTGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTAFISS*YSSWSS
Trigger: AGAAGACCAGCTCGAGTATCAGGAAGAAATGAAAGC...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp ATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACATACTCAGCGCCCGGGTaGACTTCCGAGTCTCCGCCG +
Preference number: 4 (lower is better)
Translates to: IGFGKHPEFANDKASPHTYSAPG*TSESPP
Trigger: CGGCGGAGACTCGGAAGTTCACCCGGGCGCTGAGTA...TGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652315.1
CDS-3UTR TCA 90 bp CTGAGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGTTTATTTCAGGGCATGGCTaGGGGGTTTCAGTTGTTGAC +
Preference number: 4 (lower is better)
Translates to: LRSHRHPGPLFQGMAEGFISGHG*GVSVVD
Trigger: GTCAACAACTGAAACCCCTCAGCCATGCCCTGAAAT...AAACCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp CTTTCCAGAGTCCATCTGCGCACTGCTCAAGGAGCTCCATCAGCACATCCTCGTATTTCAGGGCATGGCTaGGGGGTTTCAGTTGTTGAC +
Preference number: 4 (lower is better)
Translates to: LSRVHLRTAQGAPSAHPRISGHG*GVSVVD
Trigger: GTCAACAACTGAAACCCCTCAGCCATGCCCTGAAAT...ACGAGGATGTGCTGATGGAGCTCCTTGAGCAGTGCGCAGATGGACTCTGGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCGTTTCATCCCCTACATaGAATGGCGTATTACCACCA +
Preference number: 4 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTVSSPT*NGVLPP
Trigger: TGGTGGTAATACGCCATTTCATGTAGGGGATGAAAC...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR GCA 90 bp ATGACCCTGAAGGCGGTGCATCCTTGTCTAAACACGCCTCCCCGGCTCCTCCTCTTCCACTTCACTGTCTaGTGCCAAGAGATAACTACT +
Preference number: 4 (lower is better)
Translates to: MTLKAVHPCLNTPPRLLLFHFTV*CQEITT
Trigger: AGTAGTTATCTCTTGGCAGCAGACAGTGAAGTGGAA...GAGGAGGAGCCGGGGAGGCGTGTTTAGACAAGGATGCACCGCCTTCAGGGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR GCA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACATGGGCTCTGCCCACTaGCATTCATCAGCGCCGGGG +
Preference number: 4 (lower is better)
Translates to: VIGFGKHPEFANDKASPHMGSAH*HSSAPG
Trigger: CCCCGGCGCTGATGAATGGCAGTGGGCAGAGCCCAT...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GTCAGTGCGGAGCAATTGGAGGCTATGATGCTAAAGATCCCCAGTGGCCTATCTAGGACAGATGGGCTCTaGCCACTGCCATTCATCAGC +
Preference number: 4 (lower is better)
Translates to: VSAEQLEAMMLKIPSGLSRTDGL*PLPFIS
Trigger: GCTGATGAATGGCAGTGGGCAGAGCCCATCTGTCCT...AGATAGGCCACTGGGGATCTTTAGCATCATAGCCTCCAATTGCTCCGCACTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR GCA 90 bp ATGACCCTGAAGGCGGTGCATCCTTGTCTAAACACGCCTCCCCGGCTCCTCCTCCTTAAACAATGTCCTTaGTGCCCAAGCAAATGGCAT +
Preference number: 4 (lower is better)
Translates to: MTLKAVHPCLNTPPRLLLLKQCP*CPSKWH
Trigger: ATGCCATTTGCTTGGGCAGCAAGGACATTGTTTAAG...GAGGAGGAGCCGGGGAGGCGTGTTTAGACAAGGATGCACCGCCTTCAGGGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR GCA 90 bp GAGCAGCTGGGAGGCCTCCGTCCTGATGGAGCTCAGCTTGGAGTTACAGCACTTGAGTGTGTTTTGGTATaGAGGGCACAAATTCCTCCA +
Preference number: 4 (lower is better)
Translates to: EQLGGLRPDGAQLGVTALECVLV*RAQIPP
Trigger: TGGAGGAATTTGTGCCCTGCATACCAAAACACACTC...AAGTGCTGTAACTCCAAGCTGAGCTCCATCAGGACGGAGGCCTCCCAGCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCGAGTGTGTTTTGGTATaGAGGGCACAAATTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTECVLV*RAQIPP
Trigger: TGGAGGAATTTGTGCCCTGCATACCAAAACACACTC...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GTAGGCCCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCGCATCCCTCTTCTTCGTaGTTCCTTTACTTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: VGPVQRVIQMGQPLKIPPHPSSS*FLYLSC
Trigger: ACAACTCAAGTAAAGGAAGCACGAAGAAGAGGGATG...CGGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGGGCCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCGAGACCGGGATGTGCTaGTCGCTTGTCACCACCCTT +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRAETGMC*SLVTTL
Trigger: AAGGGTGGTGACAAGCGAGCAGCACATCCCGGTCTC...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGGAGACCGGGATGTGCTaGTCGCTTGTCACCACCCTT +
Preference number: 4 (lower is better)
Translates to: ALESILSLQMTKQVPTHGETGMC*SLVTTL
Trigger: AAGGGTGGTGACAAGCGAGCAGCACATCCCGGTCTC...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCGGACCATAATGCCTaGCCATCCCAAGCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: ALESILSLQMTKQVPTHGPDHNA*PSQAPG
Trigger: ACCAGGAGCTTGGGATGGGCAGGCATTATGGTCCGG...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCCCGGACCATAATGCCTaGCCATCCCAAGCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRAPDHNA*PSQAPG
Trigger: ACCAGGAGCTTGGGATGGGCAGGCATTATGGTCCGG...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GTAGGTCCCCAGAAGCCTGCGGCCCGAGTGCATGACCTCGGTCACTTTGCTGTATGCATGATGATAGGATaGAGGAAATCTCTGGTTTCG +
Preference number: 4 (lower is better)
Translates to: VGPQKPAARVHDLGHFAVCMMIG*RKSLVS
Trigger: CGAAACCAGAGATTTCCTGCATCCTATCATCATGCA...TACAGCAAAGTGACCGAGGTCATGCACTCGGGCCGCAGGCTTCTGGGGACCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp CCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCGCTTCTCTACAACGGTTTCCACTaGATGATGATAGGATGCAGG +
Preference number: 4 (lower is better)
Translates to: PVQRVIQMGQPLKIPPLLYNGFH*MMIGCR
Trigger: CCTGCATCCTATCATCATGCAGTGGAAACCGTTGTA...GAGAAGCGGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp CTCCTTCGCCATTTCCCTGTAGTTGGCTTTCATTTCTTCCTGATACTCGAGCTGAGGGTGCTTCCCTTCTaGGGCGTCACCAGCGGATTC +
Preference number: 4 (lower is better)
Translates to: LLRHFPVVGFHFFLILELRVLPF*GVTSGF
Trigger: GAATCCGCTGGTGACGCCGCAGAAGGGAAGCACCCT...CAGCTCGAGTATCAGGAAGAAATGAAAGCCAACTACAGGGAAATGGCGAAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR GCA 90 bp GGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCGGCTGTTGTCCAGGGTaGTTCCCTTCTGCGGCGTCA +
Preference number: 4 (lower is better)
Translates to: GPLFQGMAEGFQLLTITSGCCPG*FPSAAS
Trigger: TGACGCCGCAGAAGGGAAGCACCCTGGACAACAGCC...GCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp CCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATGGCTGTTGTCCAGGGTaGTTCCCTTCTGCGGCGTCA +
Preference number: 4 (lower is better)
Translates to: PEFANDKASPHTRAMRCNGCCPG*FPSAAS
Trigger: TGACGCCGCAGAAGGGAAGCACCCTGGACAACAGCC...ATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGGAGAGTTATCCAGGCTaGCCAGCTGCTGCAATCTGG +
Preference number: 4 (lower is better)
Translates to: GKHPEFANDKASPHTRAMESYPG*PAAAIW
Trigger: CCAGATTGCAGCAGCTGGGCAGCCTGGATAACTCTC...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000652315.1
CDS-3UTR GCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTCTGGTGCAGAACATCTaGGTCCGAGTGGCCATAGCT +
Preference number: 4 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFLVQNI*VRVAIA
Trigger: AGCTATGGCCACTCGGACGCAGATGTTCTGCACCAG...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000652315.1
CDS-3UTR GCA 90 bp GAAGTAGAGCAGCTGGGAGGCCTCCGTCCTGATGGAGCTCAGCTTGGAGTTACATCAAGTAATGACTGGTaGAGAACATCTGCGTCCGAG +
Preference number: 4 (lower is better)
Translates to: EVEQLGGLRPDGAQLGVTSSNDW*RTSASE
Trigger: CTCGGACGCAGATGTTCTGCACCAGTCATTACTTGA...TGTAACTCCAAGCTGAGCTCCATCAGGACGGAGGCCTCCCAGCTGCTCTACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTTCTGGGTCGTTCTCATaGTCCTTCATCTGGGCGGTG +
Preference number: 4 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFSGSFS*SFIWAV
Trigger: CACCGCCCAGATGAAGGAGCATGAGAACGACCCAGA...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGCATGGATCCTGGCCATaGTGTCGAGCCACGTCTTCC +
Preference number: 4 (lower is better)
Translates to: GFGKHPEFANDKASPHTRHGSWP*CRATSS
Trigger: GGAAGACGTGGCTCGACAGCATGGCCAGGATCCATG...CCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCCATGGATCCTGGCCATaGTGTCGAGCCACGTCTTCC +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRAHGSWP*CRATSS
Trigger: GGAAGACGTGGCTCGACAGCATGGCCAGGATCCATG...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp CTTTCCAGAGTCCATCTGCGCACTGCTCAAGGAGCTCCATCAGCACATCCTCGTTTCAGGTCAGTGTGGTaGTGGTACATGACAGGGATG +
Preference number: 4 (lower is better)
Translates to: LSRVHLRTAQGAPSAHPRFRSVW*WYMTGM
Trigger: CATCCCTGTCATGTACCAGCACCACACTGACCTGAA...ACGAGGATGTGCTGATGGAGCTCCTTGAGCAGTGCGCAGATGGACTCTGGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR GCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCCCTTGGTCCTCCCTGTaGTCGGTCTCCCCAGTGATT +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRAPWSSL*SVSPVI
Trigger: AATCACTGGGGAGACCGAGCACAGGGAGGACCAAGG...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp CGTAAGGGAAGAGCAGCATCTCCCGTAAACAGTCGTTCAGGATCTGAGTCTTCTGAGGTCTTCAGCAGCTaGTGGAAGCACTTCCGGGAC +
Preference number: 4 (lower is better)
Translates to: RKGRAASPVNSRSGSESSEVFSS*WKHFRD
Trigger: GTCCCGGAAGTGCTTCCAGCAGCTGCTGAAGACCTC...AGAAGACTCAGATCCTGAACGACTGTTTACGGGAGATGCTGCTCTTCCCTTACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479769.1
CDS-3UTR CCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCGTGATCCCACCCTTCTaGGAACCAAGGGAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRAVIPPF*EPREAA
Trigger: TGCTGCCTCCCTTGGTTCCCAGAAGGGTGGGATCAC...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp AATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACACGGCGCCGGGGACGTGGTaGCGAGCATTTGCCTCACTG +
Preference number: 4 (lower is better)
Translates to: NTQESNLDFKVLPHKCDTAPGTW*RAFASL
Trigger: CAGTGAGGCAAATGCTCGCCACCACGTCCCCGGCGC...CGTGTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACTCAGCGCCGGGGACGTaGTGGCGAGCATTTGCCTCA +
Preference number: 4 (lower is better)
Translates to: VIGFGKHPEFANDKASPHSAPGT*WRAFAS
Trigger: TGAGGCAAATGCTCGCCACCACGTCCCCGGCGCTGA...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGATCAGCGCCGGGGACGTaGTGGCGAGCATTTGCCTCA +
Preference number: 4 (lower is better)
Translates to: FQGMAEGFQLLTITSRKRSAPGT*WRAFAS
Trigger: TGAGGCAAATGCTCGCCACCACGTCCCCGGCGCTGA...TCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCGCCCTTGAGGACAGATaGGCTCTGCCCACTGCCATT +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRAALEDR*ALPTAI
Trigger: AATGGCAGTGGGCAGAGCCCATCTGTCCTCAAGGGC...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp CTCGGCTTTCCAGAGTCCATCTGCGCACTGCTCAAGGAGCTCCATCAGCACATCTTTGGCATGCCTGCTTaGCATTCTTCAGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: LGFPESICALLKELHQHIFGMPA*HSSAPS
Trigger: AGAAGGTGCTGAAGAATGCCAAGCAGGCATGCCAAA...GATGTGCTGATGGAGCTCCTTGAGCAGTGCGCAGATGGACTCTGGAAAGCCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp TCCTGCATCCCCACGTCTTCCATCATGGAGGCCTCCTCGTCGATGTTTGGGGTATCGTTTCCTAAGGCTTaGGCTCCAGATTCGGTTTTC +
Preference number: 4 (lower is better)
Translates to: SCIPTSSIMEASSSMFGVSFPKA*APDSVF
Trigger: GAAAACCGAATCTGGAGCCCAAGCCTTAGGAAACGA...TACCCCAAACATCGACGAGGAGGCCTCCATGATGGAAGACGTGGGGATGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp GTTCCCTTAGGACTGCTGAACAATAAACACCCAGCAGCCACCCCAAATGGTCAGCGCTTCCCCATGTACTaGAACTGGTGCAGGCAGACT +
Preference number: 4 (lower is better)
Translates to: VPLGLLNNKHPAATPNGQRFPMY*NWCRQT
Trigger: AGTCTGCCTGCACCAGTTCCAGTACATGGGGAAGCG...CTGACCATTTGGGGTGGCTGCTGGGTGTTTATTGTTCAGCAGTCCTAAGGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448493.7
CDS-3UTR CCA 90 bp CCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCGCTTCTCCCGTGCGTATCCTTTTaGTTAAGTCCTTCACATCAG +
Preference number: 4 (lower is better)
Translates to: PVQRVIQMGQPLKIPPLLPCVSF*LSPSHQ
Trigger: CTGATGTGAAGGACTTAACCAAAAGGATACGCACGG...GAGAAGCGGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCCCGTGCGTATCCTTTTaGTTAAGTCCTTCACATCAG +
Preference number: 4 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTPCVSF*LSPSHQ
Trigger: CTGATGTGAAGGACTTAACCAAAAGGATACGCACGG...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCCCTTCATCTGGGCGGTaGCCATTAGCACCGTGCGTA +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRAPSSGR*PLAPCV
Trigger: TACGCACGGTGCTAATGGCCACCGCCCAGATGAAGG...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTCCACGTCTTCCATCATaGAGGCCTCCTCGTCGATGT +
Preference number: 4 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFPRLPS*RPPRRC
Trigger: ACATCGACGAGGAGGCCTCCATGATGGAAGACGTGG...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTGTATGGCTGTCAGGATaGTGCGCCGTTTGCACTGCT +
Preference number: 4 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFVWLSG*CAVCTA
Trigger: AGCAGTGCAAACGGCGCACCATCCTGACAGCCATAC...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATCACACGACCAAGGGAAGCAGTGTATaGCTGTCAGGATGGTGCGCC +
Preference number: 4 (lower is better)
Translates to: ANDKASPHTRAMRCNHTTKGSSV*LSGWCA
Trigger: GGCGCACCATCCTGACAGCCATACACTGCTTCCCTT...GGTCGTGTGATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTAAGGGAAGCAGTGTATaGCTGTCAGGATGGTGCGCC +
Preference number: 4 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFKGSSV*LSGWCA
Trigger: GGCGCACCATCCTGACAGCCATACACTGCTTCCCTT...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACCTCTCCCCTTCCCCTTaGTCCTCCCTGTGCTCGGTC +
Preference number: 4 (lower is better)
Translates to: VIGFGKHPEFANDKASPHLSPSP*SSLCSV
Trigger: GACCGAGCACAGGGAGGACCAAGGGGAAGGGGAGAG...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp AACTGTATGATCCTGAGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGTACCAATGCCGGAGATaGCGCCCAGCAGGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: NCMILRSHRHPGPLFQGMYQCRR*RPAGPC
Trigger: ACAAGGACCTGCTGGGCGCCATCTCCGGCATTGGTA...CATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCTCAGGATCATACAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCCTTTATTTCAGGGCATaGCTGAGGGGTTTCAGTTGT +
Preference number: 4 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTLYFRA*LRGFSC
Trigger: ACAACTGAAACCCCTCAGCCATGCCCTGAAATAAAG...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp CTCGGCTTTCCAGAGTCCATCTGCGCACTGCTCAAGGAGCTCCATCAGCACATCGAAGATGCCATTACTTaGCACTTCACAACAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LGFPESICALLKELHQHIEDAIT*HFTTGW
Trigger: CCAGCCTGTTGTGAAGTGCCAAGTAATGGCATCTTC...GATGTGCTGATGGAGCTCCTTGAGCAGTGCGCAGATGGACTCTGGAAAGCCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR CAA 72 bp ATCTGGGCGGTGGCCATTAGCACCGTGCGTATCCTTTaGGTTAAGTCCTTCACATCAGAGGAGAAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: IWAVAISTVRIL*VKSFTSEEKLV
Trigger: CACCAGCTTCTCCTCTGATGTGAAGGACTTAACCAAAAGGATACGCACGGTGCTAATGGCCACCGCCCAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR TCA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGACCTCATGGTCACGCTaGTGGCACTGTTCATGTTGC +
Preference number: 4 (lower is better)
Translates to: GKHPEFANDKASPHTRAMTSWSR*WHCSCC
Trigger: GCAACATGAACAGTGCCATCAGCGTGACCATGAGGT...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GGCCCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCGCTTTTGCAGCTTCAAAGTTaGGCTGGAGGATCTTATTTA +
Preference number: 4 (lower is better)
Translates to: GPVQRVIQMGQPLKIPPLLQLQS*AGGSYL
Trigger: TAAATAAGATCCTCCAGCTCAACTTTGAAGCTGCAA...AAGCGGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR TCA 90 bp GGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCCATGAAGGATGCCCTTaGGGACAGATGGGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: GPLFQGMAEGFQLLTITSHEGCP*GQMGSA
Trigger: GGCAGAGCCCATCTGTCCTCAAGGGCATCCTTCATG...GCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGTGCATGGCGGCTTCATaGAGGATGCCCTTGAGGACA +
Preference number: 4 (lower is better)
Translates to: ALESILSLQMTKQVPTHGCMAAS*RMPLRT
Trigger: TGTCCTCAAGGGCATCCTTCATGAAGCCGCCATGCA...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TTAGGACAGTCTGCAGAATGGACAGGAGGCTCACCTGCCCGAAGAAGGCTACCCATGAGGACAAGTGACTaGAAATATTCCCTGCTTCGG +
Preference number: 4 (lower is better)
Translates to: LGQSAEWTGGSPARRRLPMRTSD*KYSLLR
Trigger: CCGAAGCAGGGAATATTTTCAGTCACTTGTCCTCAT...GGGTAGCCTTCTTCGGGCAGGTGAGCCTCCTGTCCATTCTGCAGACTGTCCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR TCA 90 bp CACACACGGGCCATGAGATGTAATCACACGACCGAAGACGAGCTGGTCATCCCGATGAGGACAAGTGACTaGAAATATTCCCTGCTTCGG +
Preference number: 4 (lower is better)
Translates to: HTRAMRCNHTTEDELVIPMRTSD*KYSLLR
Trigger: CCGAAGCAGGGAATATTTTCAGTCACTTGTCCTCAT...CGGGATGACCAGCTCGTCTTCGGTCGTGTGATTACATCTCATGGCCCGTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCTCAGCGCAATGTGTaGTGCTCCCCTGAAGGACTT +
Preference number: 4 (lower is better)
Translates to: GFGKHPEFANDKASPHTRAQRNV*CSPEGL
Trigger: AAGTCCTTCAGGGGAGCATCACACATTGCGCTGAGC...CCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp AGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGATGCACTTAAGGGGCTaGGAGTCTTCCTCATCTGAA +
Preference number: 4 (lower is better)
Translates to: RSHRHPGPLFQGMAEGFQMHLRG*ESSSSE
Trigger: TTCAGATGAGGAAGACTCTCAGCCCCTTAAGTGCAT...CTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627024.2
CDS-3UTR TCA 90 bp CACACACGGGCCATGAGATGTAATCACACGACCGAAGACGAGCTGGTCATCCCGTGCCTGATGGCTCCTTaGAGCATATCTGTCATCAAA +
Preference number: 4 (lower is better)
Translates to: HTRAMRCNHTTEDELVIPCLMAP*SISVIK
Trigger: TTTGATGACAGATATGCTTCAAGGAGCCATCAGGCA...CGGGATGACCAGCTCGTCTTCGGTCGTGTGATTACATCTCATGGCCCGTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp CCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATTGTAGATGTCGGCGATaGGCTCGTAGCGCTCGGCTT +
Preference number: 4 (lower is better)
Translates to: PEFANDKASPHTRAMRCNCRCRR*ARSARL
Trigger: AAGCCGAGCGCTACGAGCTCATCGCCGACATCTACA...ATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCGCTTCCACTTCGCCCTaGGCTGCATCCTTGTATTGC +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRAASTSP*AASLYC
Trigger: GCAATACAAGGATGCAGCTCAGGGCGAAGTGGAAGC...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
CDS-3UTR TCA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGATGGCATCTCAAACATaGAGCGGCGGATGTTGTGGG +
Preference number: 4 (lower is better)
Translates to: GKHPEFANDKASPHTRAMMASQT*SGGCCG
Trigger: CCCACAACATCCGCCGCTTCATGTTTGAGATGCCAT...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGTGTGGTGCTGGTACATaGCAGGGATGCGCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: GKHPEFANDKASPHTRAMCGAGT*QGCASS
Trigger: TGAAGAAGCGCATCCCTGTCATGTACCAGCACCACA...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGGAGCTGGTCATCCCGTaGACCATTGTGCTTGTTGGA +
Preference number: 4 (lower is better)
Translates to: GKHPEFANDKASPHTRAMELVIP*TIVLVG
Trigger: TCCAACAAGCACAATGGTTCACGGGATGACCAGCTC...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp AAGAATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACTACTCAGCGCCCGGGTaGACTTCCGAGTCTCCGCCG +
Preference number: 4 (lower is better)
Translates to: KNTQESNLDFKVLPHKCDYSAPG*TSESPP
Trigger: CGGCGGAGACTCGGAAGTTCACCCGGGCGCTGAGTA...GTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427887.2
CDS-3UTR TCA 90 bp AGAGCATGGAGCGTTACCAATGCCGGAGATGGCGCCCAGCAGGTCCTTGTGCAGCGAGGTGAATTCCTATaGAAAGTGGATTTGGATCTT +
Preference number: 4 (lower is better)
Translates to: RAWSVTNAGDGAQQVLVQRGEFL*KVDLDL
Trigger: AAGATCCAAATCCACTTTTCATAGGAATTCACCTCG...CTGCACAAGGACCTGCTGGGCGCCATCTCCGGCATTGGTAACGCTCCATGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp GTGCTTAATAAGCCGGTCACTGTTGGCACAGTTGTTGATGATGGACAGGGACTGTGTGTCTGGCAGCTGTaGGCACACATTCTCCCAGAC +
Preference number: 4 (lower is better)
Translates to: VLNKPVTVGTVVDDGQGLCVWQL*AHILPD
Trigger: GTCTGGGAGAATGTGTGCTCACAGCTGCCAGACACA...CAGTCCCTGTCCATCATCAACAACTGTGCCAACAGTGACCGGCTTATTAAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR GCA 90 bp AATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACACGATGGGCTCTGCCCACTaGCATTCATCAGCGCCGGGG +
Preference number: 4 (lower is better)
Translates to: NTQESNLDFKVLPHKCDTMGSAH*HSSAPG
Trigger: CCCCGGCGCTGATGAATGGCAGTGGGCAGAGCCCAT...CGTGTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp TCCTGCATCCCCACGTCTTCCATCATGGAGGCCTCCTCGTCGATGTTTGGGGTAACTGAAAATATTCCCTaGTTCGGATACTGCATGGCG +
Preference number: 4 (lower is better)
Translates to: SCIPTSSIMEASSSMFGVTENIP*FGYCMA
Trigger: CGCCATGCAGTATCCGAAGCAGGGAATATTTTCAGT...TACCCCAAACATCGACGAGGAGGCCTCCATGATGGAAGACGTGGGGATGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp CACACACGGGCCATGAGATGTAATCACACGACCGAAGACGAGCTGGTCATCCCGGAGTGTGTTTTGGTATaGAGGGCACAAATTCCTCCA +
Preference number: 4 (lower is better)
Translates to: HTRAMRCNHTTEDELVIPECVLV*RAQIPP
Trigger: TGGAGGAATTTGTGCCCTGCATACCAAAACACACTC...CGGGATGACCAGCTCGTCTTCGGTCGTGTGATTACATCTCATGGCCCGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GAGCAGCTGGGAGGCCTCCGTCCTGATGGAGCTCAGCTTGGAGTTACAGCACTTCATCCCTCTTCTTCGTaGTTCCTTTACTTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: EQLGGLRPDGAQLGVTALHPSSS*FLYLSC
Trigger: ACAACTCAAGTAAAGGAAGCACGAAGAAGAGGGATG...AAGTGCTGTAACTCCAAGCTGAGCTCCATCAGGACGGAGGCCTCCCAGCTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCCATCCCTCTTCTTCGTaGTTCCTTTACTTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTHPSSS*FLYLSC
Trigger: ACAACTCAAGTAAAGGAAGCACGAAGAAGAGGGATG...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp ACAGAGCCGCACACATGTCCGCTCTCCCTTCATAGAATGTTGAGGGAAACTTATGAGACCGGGATGTGCTaGTCGCTTGTCACCACCCTT +
Preference number: 4 (lower is better)
Translates to: TEPHTCPLSLHRMLRETYETGMC*SLVTTL
Trigger: AAGGGTGGTGACAAGCGAGCAGCACATCCCGGTCTC...ATAAGTTTCCCTCAACATTCTATGAAGGGAGAGCGGACATGTGTGCGGCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp ATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACAGCCGAGACCGGGATGTaGTGCTCGCTTGTCACCACC +
Preference number: 4 (lower is better)
Translates to: IGFGKHPEFANDKASPHTAETGM*CSLVTT
Trigger: GGTGGTGACAAGCGAGCAGCACATCCCGGTCTCGGC...TGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp ATCCTGAGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGTACAACGGTTTCCACTaGATGATGATAGGATGCAGG +
Preference number: 4 (lower is better)
Translates to: ILRSHRHPGPLFQGMAEGYNGFH*MMIGCR
Trigger: CCTGCATCCTATCATCATGCAGTGGAAACCGTTGTA...CCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCTCAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTTATATGGAGAAGCAATaGCGGAGATGGCGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFYMEKQ*RRWRPA
Trigger: TGCTGGGCGCCATCTCCGGCATTGCTTCTCCATATA...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000652315.1
CDS-3UTR GCA 90 bp ATGACCCTGAAGGCGGTGCATCCTTGTCTAAACACGCCTCCCCGGCTCCTCCTCCGGAATTTCCCAATGTaGTACTTTGTTGGTGCTTAT +
Preference number: 4 (lower is better)
Translates to: MTLKAVHPCLNTPPRLLLRNFPM*YFVGAY
Trigger: ATAAGCACCAACAAAGTAGCACATTGGGAAATTCCG...GAGGAGGAGCCGGGGAGGCGTGTTTAGACAAGGATGCACCGCCTTCAGGGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR GCA 90 bp GCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATCACACGACCAGGCTGCCCAGCTGCTaGAATCTGGCATGCATCATT +
Preference number: 4 (lower is better)
Translates to: ANDKASPHTRAMRCNHTTRLPSC*NLACII
Trigger: AATGATGCATGCCAGATTGCAGCAGCTGGGCAGCCT...GGTCGTGTGATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000652315.1
CDS-3UTR GCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCTCTGGGTCGTTCTCATaGTCCTTCATCTGGGCGGTG +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRASGSFS*SFIWAV
Trigger: CACCGCCCAGATGAAGGAGCATGAGAACGACCCAGA...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGAGTCCATCTGCGCACTaGTCAAGGAGCTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: GFGKHPEFANDKASPHTRSPSAH*SRSSIS
Trigger: GCTGATGGAGCTCCTTGAGCAGTGCGCAGATGGACT...CCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGAGTCCATCTGCGCACTaGTCAAGGAGCTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: ALESILSLQMTKQVPTHGSPSAH*SRSSIS
Trigger: GCTGATGGAGCTCCTTGAGCAGTGCGCAGATGGACT...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGTTTCCAGAGTCCATCTaGGCACTGCTCAAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: GKHPEFANDKASPHTRAMFPESI*ALLKEL
Trigger: GAGCTCCTTGAGCAGTGCGCAGATGGACTCTGGAAA...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGCACTTCGCCCTGAGCTaGATCCTTGTATTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: GFGKHPEFANDKASPHTRHFALS*ILVLQG
Trigger: CCCCTGCAATACAAGGATGCAGCTCAGGGCGAAGTG...CCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
CDS-3UTR GCA 90 bp GCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGAAAAGGGCCCGGGCTCTCTaGTTCCACTTCGCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: AEGFQLLTITSRKRILRKRARAL*FHFALS
Trigger: GCTCAGGGCGAAGTGGAAGCAGAGAGCCCGGGCCCT...TTTCCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGGCATCAATGTCAGTaGAGCCCTCCCTGCCATGTA +
Preference number: 4 (lower is better)
Translates to: GKHPEFANDKASPHTRAMRHQCQ*SPPCHV
Trigger: TACATGGCAGGGAGGGCTGCACTGACATTGATGCCT...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAAGCTGCGACATCCTCCTaGCCCCGCCGCCTCCGCCTC +
Preference number: 4 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKAATSS*PRRLRL
Trigger: GAGGCGGAGGCGGCGGGGGCAGGAGGATGTCGCAGC...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652315.1
CDS-3UTR GCA 90 bp CTCGGCTTTCCAGAGTCCATCTGCGCACTGCTCAAGGAGCTCCATCAGCACATCCCTAATAAAGAGAACTaGTGGGTGTGTCTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: LGFPESICALLKELHQHIPNKEN*WVCLSA
Trigger: GGCTGAAAGACACACCCAGCAGTTCTCTTTATTAGG...GATGTGCTGATGGAGCTCCTTGAGCAGTGCGCAGATGGACTCTGGAAAGCCGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp GTTCCCTTAGGACTGCTGAACAATAAACACCCAGCAGCCACCCCAAATGGTCAGCCACATCCTCTTCCTTaGCTCTTCCGAAACAGGCTC +
Preference number: 4 (lower is better)
Translates to: VPLGLLNNKHPAATPNGQPHPLP*LFRNRL
Trigger: GAGCCTGTTTCGGAAGAGCCAAGGAAGAGGATGTGG...CTGACCATTTGGGGTGGCTGCTGGGTGTTTATTGTTCAGCAGTCCTAAGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448493.7
CDS-3UTR CCA 90 bp TCCTGCATCCCCACGTCTTCCATCATGGAGGCCTCCTCGTCGATGTTTGGGGTATGCCTCACTGAGAAATaGTTCAGGTCTACGTGGAAA +
Preference number: 4 (lower is better)
Translates to: SCIPTSSIMEASSSMFGVCLTEK*FRSTWK
Trigger: TTTCCACGTAGACCTGAACCATTTCTCAGTGAGGCA...TACCCCAAACATCGACGAGGAGGCCTCCATGATGGAAGACGTGGGGATGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp ATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACATCAGCGCCGGGGACGTaGTGGCGAGCATTTGCCTCA +
Preference number: 4 (lower is better)
Translates to: IGFGKHPEFANDKASPHTSAPGT*WRAFAS
Trigger: TGAGGCAAATGCTCGCCACCACGTCCCCGGCGCTGA...TGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCGCCCTTGAGGACAGATaGGCTCTGCCCACTGCCATT +
Preference number: 4 (lower is better)
Translates to: GPLFQGMAEGFQLLTITSALEDR*ALPTAI
Trigger: AATGGCAGTGGGCAGAGCCCATCTGTCCTCAAGGGC...GCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp CTTTCCAGAGTCCATCTGCGCACTGCTCAAGGAGCTCCATCAGCACATCCTCGTTTCTTCAGCACCTTCTaGGCCACCTTAGAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: LSRVHLRTAQGAPSAHPRFFSTF*ATLEES
Trigger: AGACTCTTCTAAGGTGGCCCAGAAGGTGCTGAAGAA...ACGAGGATGTGCTGATGGAGCTCCTTGAGCAGTGCGCAGATGGACTCTGGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp AGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTTTGGCATGCCTGCTTaGCATTCTTCAGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: RSHRHPGPLFQGMAEGFQFGMPA*HSSAPS
Trigger: AGAAGGTGCTGAAGAATGCCAAGCAGGCATGCCAAA...CTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp AGAGCATGGAGCGTTACCAATGCCGGAGATGGCGCCCAGCAGGTCCTTGTGCAGTGTCTTGCCTGTAGATaGCAGAAAATCTGGCATTTT +
Preference number: 4 (lower is better)
Translates to: RAWSVTNAGDGAQQVLVQCLACR*QKIWHF
Trigger: AAAATGCCAGATTTTCTGCCATCTACAGGCAAGACA...CTGCACAAGGACCTGCTGGGCGCCATCTCCGGCATTGGTAACGCTCCATGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAAGGCGATCATCACGTaGCCTTCCATCGCATGCAGA +
Preference number: 4 (lower is better)
Translates to: GKHPEFANDKASPHTRAMKAIIT*PSIACR
Trigger: TCTGCATGCGATGGAAGGCCACGTGATGATCGCCTT...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp CACACACGGGCCATGAGATGTAATCACACGACCGAAGACGAGCTGGTCATCCCGCTCACTATTCCTTTCTaGAAGGCTGTTACCCGAATC +
Preference number: 4 (lower is better)
Translates to: HTRAMRCNHTTEDELVIPLTIPF*KAVTRI
Trigger: GATTCGGGTAACAGCCTTCCAGAAAGGAATAGTGAG...CGGGATGACCAGCTCGTCTTCGGTCGTGTGATTACATCTCATGGCCCGTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp CTGGAATCTGGTTCCCCCAATGCCAACAACGTCTGCTATCAGCTGGCTGACAGACCCATGTACTGGAACTaGTGCAGGCAGACTTCAGAT +
Preference number: 4 (lower is better)
Translates to: LESGSPNANNVCYQLADRPMYWN*CRQTSD
Trigger: ATCTGAAGTCTGCCTGCACCAGTTCCAGTACATGGG...TCTGTCAGCCAGCTGATAGCAGACGTTGTTGGCATTGGGGGAACCAGATTCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCGCTTCCCCATGTACTaGAACTGGTGCAGGCAGACT +
Preference number: 4 (lower is better)
Translates to: ALESILSLQMTKQVPTHGRFPMY*NWCRQT
Trigger: AGTCTGCCTGCACCAGTTCCAGTACATGGGGAAGCG...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp CCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCGCTTCTCCACACTTTGTTAAACTaGCTATGTATCGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: PVQRVIQMGQPLKIPPLLHTLLN*LCIASP
Trigger: TGGGGAAGCGATACATAGCCAGTTTAACAAAGTGTG...GAGAAGCGGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR CCA 90 bp AGGGACTGCTGGAATCTGGTTCCCCCAATGCCAACAACGTCTGCTATCAGCTGGGCTTCAAGTAATGACTaGTGCAGAACATCTGCGTCC +
Preference number: 4 (lower is better)
Translates to: RDCWNLVPPMPTTSAISWASSND*CRTSAS
Trigger: GGACGCAGATGTTCTGCACCAGTCATTACTTGAAGC...CCAGCTGATAGCAGACGTTGTTGGCATTGGGGGAACCAGATTCCAGCAGTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp GAGAGATCGCCATTTTTGACATGGATCCTGGCCATGCTGTCGAGCCACGTCTTCTGGTCGGCCAGGAGCTaGTTCTTAAACGCCAATGTA +
Preference number: 4 (lower is better)
Translates to: ERSPFLTWILAMLSSHVFWSARS*FLNANV
Trigger: TACATTGGCGTTTAAGAACCAGCTCCTGGCCGACCA...GAAGACGTGGCTCGACAGCATGGCCAGGATCCATGTCAAAAATGGCGATCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGAGGATTATGTCCATaGTCGGCCAGGAGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: GKHPEFANDKASPHTRAMRGLCP*SARSWF
Trigger: GAACCAGCTCCTGGCCGACCATGGACATAATCCTCT...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp CCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATCCTTCATCTGGGCGGTaGCCATTAGCACCGTGCGTA +
Preference number: 4 (lower is better)
Translates to: PEFANDKASPHTRAMRCNPSSGR*PLAPCV
Trigger: TACGCACGGTGCTAATGGCCACCGCCCAGATGAAGG...ATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTCTCCTCGTCGATGTTTaGGGTAATGACCCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFLLVDV*GNDPEG
Trigger: GCCTTCAGGGTCATTACCCCAAACATCGACGAGGAG...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCACGTCTTCCATCATaGAGGCCTCCTCGTCGATGT +
Preference number: 4 (lower is better)
Translates to: ALESILSLQMTKQVPTHGPRLPS*RPPRRC
Trigger: ACATCGACGAGGAGGCCTCCATGATGGAAGACGTGG...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCCCACGTCTTCCATCATaGAGGCCTCCTCGTCGATGT +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRAPRLPS*RPPRRC
Trigger: ACATCGACGAGGAGGCCTCCATGATGGAAGACGTGG...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GCTTCTTCACATAAGGGAAGCAGTGTATGGCTGTCAGGATGGTGCGCCGTTTGCACATCCTCGTTGAAATaGACATCCTGCATCCCCACG +
Preference number: 4 (lower is better)
Translates to: ASSHKGSSVWLSGWCAVCTSSLK*TSCIPT
Trigger: CGTGGGGATGCAGGATGTCCATTTCAACGAGGATGT...GCAAACGGCGCACCATCCTGACAGCCATACACTGCTTCCCTTATGTGAAGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp GTTACAGCACTTGAGAATCTCGTAACACAGAGCCGCACACATGTCCGCTCTCCCAGCGTGTCATACAGATaGGCCAGCCTCTCAAAATCC +
Preference number: 4 (lower is better)
Translates to: VTALENLVTQSRTHVRSPSVSYR*ASLSKS
Trigger: GGATTTTGAGAGGCTGGCCCATCTGTATGACACGCT...GGGAGAGCGGACATGTGTGCGGCTCTGTGTTACGAGATTCTCAAGTGCTGTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp ATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGACAGCTGCGAGTCCCTaGCCGTGCAAGGCACAGGCA +
Preference number: 4 (lower is better)
Translates to: MAEGFQLLTITSRKRILRTAASP*PCKAQA
Trigger: TGCCTGTGCCTTGCACGGCCAGGGACTCGCAGCTGT...CCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTTCACTGTCTGTAAACTaGTATTGCGCTGCCTGCCCG +
Preference number: 4 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFSLSVN*YCAACP
Trigger: CGGGCAGGCAGCGCAATACCAGTTTACAGACAGTGA...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000652315.1
CDS-3UTR CCA 90 bp GGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGTATGGCTGTCAGGATaGTGCGCCGTTTGCACTGCT +
Preference number: 4 (lower is better)
Translates to: GFGKHPEFANDKASPHTRVWLSG*CAVCTA
Trigger: AGCAGTGCAAACGGCGCACCATCCTGACAGCCATAC...CCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGAAGGGAAGCAGTGTATaGCTGTCAGGATGGTGCGCC +
Preference number: 4 (lower is better)
Translates to: GFGKHPEFANDKASPHTRKGSSV*LSGWCA
Trigger: GGCGCACCATCCTGACAGCCATACACTGCTTCCCTT...CCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GTTCACCAACTATTGGCTCCAAGACACTTTCAGAGTGATGGTGGAGAGAAGCCCAGGTCAGTGTGGTGCTaGTACATGACAGGGATGCGC +
Preference number: 4 (lower is better)
Translates to: VHQLLAPRHFQSDGGEKPRSVWC*YMTGMR
Trigger: GCGCATCCCTGTCATGTACCAGCACCACACTGACCT...GGGCTTCTCTCCACCATCACTCTGAAAGTGTCTTGGAGCCAATAGTTGGTGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTACACTCACGCTGCCCTaGAGTTTGAGCTGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFTLTLP*SLSCSL
Trigger: CAAACTGCAGCTCAAACTCCAGGGCAGCGTGAGTGT...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCCGACCGAAGACGAGCTaGTCATCCCGTGAACCATTG +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRARPKTS*SSREPL
Trigger: CAATGGTTCACGGGATGACCAGCTCGTCTTCGGTCG...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GTGCTTAATAAGCCGGTCACTGTTGGCACAGTTGTTGATGATGGACAGGGACTGCGACCGAAGACGAGCTaGTCATCCCGTGAACCATTG +
Preference number: 4 (lower is better)
Translates to: VLNKPVTVGTVVDDGQGLRPKTS*SSREPL
Trigger: CAATGGTTCACGGGATGACCAGCTCGTCTTCGGTCG...CAGTCCCTGTCCATCATCAACAACTGTGCCAACAGTGACCGGCTTATTAAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGGGAAGGAAAGGAAACTaGCTTCCCAGGCACAAGTGG +
Preference number: 4 (lower is better)
Translates to: GKHPEFANDKASPHTRAMGRKGN*LPRHKW
Trigger: CCACTTGTGCCTGGGAAGCCAGTTTCCTTTCCTTCC...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442173.5
ENST00000630992.2
CDS-3UTR CCA 90 bp CGTAAGGGAAGAGCAGCATCTCCCGTAAACAGTCGTTCAGGATCTGAGTCTTCTGTCTTCAGCAGCTGCTaGAAGCACTTCCGGGACACA +
Preference number: 4 (lower is better)
Translates to: RKGRAASPVNSRSGSESSVFSSC*KHFRDT
Trigger: TGTGTCCCGGAAGTGCTTCCAGCAGCTGCTGAAGAC...AGAAGACTCAGATCCTGAACGACTGTTTACGGGAGATGCTGCTCTTCCCTTACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479769.1
CDS-3UTR CCA 90 bp TCCTGCATCCCCACGTCTTCCATCATGGAGGCCTCCTCGTCGATGTTTGGGGTAGTGAAGCTGGGTATTTaGGGGCCTGCTATGATAAAA +
Preference number: 4 (lower is better)
Translates to: SCIPTSSIMEASSSMFGVVKLGI*GPAMIK
Trigger: TTTTATCATAGCAGGCCCCCAAATACCCAGCTTCAC...TACCCCAAACATCGACGAGGAGGCCTCCATGATGGAAGACGTGGGGATGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCCTTCGCAGGCACTGTTaGGCATATGTATCGACCCTG +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRALRRHC*AYVSTL
Trigger: CAGGGTCGATACATATGCTCAACAGTGCCTGCGAAG...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp ATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACAGCCAGCCATGCTTGGTaGTCCCACCCTTCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: IGFGKHPEFANDKASPHTASHAW*SHPSGN
Trigger: GTTCCCAGAAGGGTGGGATCACCAAGCATGGCTGGC...TGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp AATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACACGGCCAGCCATGCTTGGTaGTCCCACCCTTCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: NTQESNLDFKVLPHKCDTASHAW*SHPSGN
Trigger: GTTCCCAGAAGGGTGGGATCACCAAGCATGGCTGGC...CGTGTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp GTGCTTAATAAGCCGGTCACTGTTGGCACAGTTGTTGATGATGGACAGGGACTGACCTCATGGTCACGCTaGTGGCACTGTTCATGTTGC +
Preference number: 4 (lower is better)
Translates to: VLNKPVTVGTVVDDGQGLTSWSR*WHCSCC
Trigger: GCAACATGAACAGTGCCATCAGCGTGACCATGAGGT...CAGTCCCTGTCCATCATCAACAACTGTGCCAACAGTGACCGGCTTATTAAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR TCA 90 bp CCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATTGCATGGCGGCTTCATaGAGGATGCCCTTGAGGACA +
Preference number: 4 (lower is better)
Translates to: PEFANDKASPHTRAMRCNCMAAS*RMPLRT
Trigger: TGTCCTCAAGGGCATCCTTCATGAAGCCGCCATGCA...ATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCGCTCAGCGCAATGTGTaGTGCTCCCCTGAAGGACTT +
Preference number: 4 (lower is better)
Translates to: GPLFQGMAEGFQLLTITSAQRNV*CSPEGL
Trigger: AAGTCCTTCAGGGGAGCATCACACATTGCGCTGAGC...GCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCAGTCTGCAAGTAACTTaGGCATGTCATCATTGGATA +
Preference number: 4 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTSLQVT*ACHHWI
Trigger: TATCCAATGATGACATGCTCAAGTTACTTGCAGACT...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GGCCCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCGCTTCCTCATCTGAATCTTTaGATTCAATGCAAATCGCAA +
Preference number: 4 (lower is better)
Translates to: GPVQRVIQMGQPLKIPPLPHLNL*IQCKSQ
Trigger: TTGCGATTTGCATTGAATTCAAAGATTCAGATGAGG...AAGCGGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR TCA 90 bp CTGGAATCTGGTTCCCCCAATGCCAACAACGTCTGCTATCAGCTGGCTGACAGAATGCACTTAAGGGGCTaGGAGTCTTCCTCATCTGAA +
Preference number: 4 (lower is better)
Translates to: LESGSPNANNVCYQLADRMHLRG*ESSSSE
Trigger: TTCAGATGAGGAAGACTCTCAGCCCCTTAAGTGCAT...TCTGTCAGCCAGCTGATAGCAGACGTTGTTGGCATTGGGGGAACCAGATTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR TCA 90 bp GCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATCACACGACCGTGGCTATCCTTGCCTaGTGGCTCCTTGAAGCATAT +
Preference number: 4 (lower is better)
Translates to: ANDKASPHTRAMRCNHTTVAILA*WLLEAY
Trigger: ATATGCTTCAAGGAGCCATCAGGCAAGGATAGCCAC...GGTCGTGTGATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp ATCCTGAGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGCATTTCTCACACTGTTaGTGTTTGGAGTTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: ILRSHRHPGPLFQGMAEGHFSHC*CLELRL
Trigger: CAACCTCAACTCCAAACATCAACAGTGTGAGAAATG...CCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCTCAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp GTTACAGCACTTGAGAATCTCGTAACACAGAGCCGCACACATGTCCGCTCTCCCCCGAATCTGTGCTTATaGGAGATCCTCTCGAATCAG +
Preference number: 4 (lower is better)
Translates to: VTALENLVTQSRTHVRSPPNLCL*EILSNQ
Trigger: CTGATTCGAGAGGATCTCTCATAAGCACAGATTCGG...GGGAGAGCGGACATGTGTGCGGCTCTGTGTTACGAGATTCTCAAGTGCTGTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR TCA 90 bp GTCAGTGCGGAGCAATTGGAGGCTATGATGCTAAAGATCCCCAGTGGCCTATCTGCACATTGCTGCCTCTaGGAGATCGCCATTTTTGAC +
Preference number: 4 (lower is better)
Translates to: VSAEQLEAMMLKIPSGLSAHCCL*EIAIFD
Trigger: GTCAAAAATGGCGATCTCTCAGAGGCAGCAATGTGC...AGATAGGCCACTGGGGATCTTTAGCATCATAGCCTCCAATTGCTCCGCACTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp CCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATGCTTCCACTTCGCCCTaGGCTGCATCCTTGTATTGC +
Preference number: 4 (lower is better)
Translates to: PEFANDKASPHTRAMRCNASTSP*AASLYC
Trigger: GCAATACAAGGATGCAGCTCAGGGCGAAGTGGAAGC...ATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
CDS-3UTR TCA 90 bp ACAGGCTGGTTGTTTTCAGATCTCAGTAGGCAAATGAGCTGCCATGGACTGGGATGTGGTGCTGGTACATaGCAGGGATGCGCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: TGWLFSDLSRQMSCHGLGCGAGT*QGCASS
Trigger: TGAAGAAGCGCATCCCTGTCATGTACCAGCACCACA...TCCCAGTCCATGGCAGCTCATTTGCCTACTGAGATCTGAAAACAACCAGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGTGTGGTGCTGGTACATaGCAGGGATGCGCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: ALESILSLQMTKQVPTHGCGAGT*QGCASS
Trigger: TGAAGAAGCGCATCCCTGTCATGTACCAGCACCACA...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACCCCACACACGGGCCATaGGATGTAATCACACGACCG +
Preference number: 4 (lower is better)
Translates to: VIGFGKHPEFANDKASPHPTHGP*DVITRP
Trigger: CGGTCGTGTGATTACATCTCATGGCCCGTGTGTGGG...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp CTTTGCCTCAGGTCACTTAATGAAAGAACTCCTAGTGACCTCATAGGGCAGAGGTCCGGGACACATGACTaGCTCCAGGGAAAAGGGATC +
Preference number: 4 (lower is better)
Translates to: LCLRSLNERTPSDLIGQRSGTHD*LQGKGI
Trigger: GATCCCTTTTCCCTGGAGTCAGTCATGTGTCCCGGA...CCTCTGCCCTATGAGGTCACTAGGAGTTCTTTCATTAAGTGACCTGAGGCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479769.1
CDS-3UTR TCA 90 bp ATCCTGAGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGAAGGCAAGTAATCAATaGGGGACAGGAAATGCGAAT +
Preference number: 4 (lower is better)
Translates to: ILRSHRHPGPLFQGMAEGKASNQ*GTGNAN
Trigger: ATTCGCATTTCCTGTCCCTCATTGATTACTTGCCTT...CCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCTCAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR GCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCTTGTACAGCCAGCCATaGTTGGTGATCCCACCCTTC +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRALYSQP*LVIPPF
Trigger: GAAGGGTGGGATCACCAAGCATGGCTGGCTGTACAA...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GTGCTTAATAAGCCGGTCACTGTTGGCACAGTTGTTGATGATGGACAGGGACTGTTGTACAGCCAGCCATaGTTGGTGATCCCACCCTTC +
Preference number: 4 (lower is better)
Translates to: VLNKPVTVGTVVDDGQGLLYSQP*LVIPPF
Trigger: GAAGGGTGGGATCACCAAGCATGGCTGGCTGTACAA...CAGTCCCTGTCCATCATCAACAACTGTGCCAACAGTGACCGGCTTATTAAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp ATCCTGAGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGTTCCACTTCACTGTCTaGTGCCAAGAGATAACTACT +
Preference number: 4 (lower is better)
Translates to: ILRSHRHPGPLFQGMAEGFHFTV*CQEITT
Trigger: AGTAGTTATCTCTTGGCAGCAGACAGTGAAGTGGAA...CCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCTCAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTGTGGTGGCGAGCATTTaGCTCACTGAGAAATGGTTC +
Preference number: 4 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFVVASI*LTEKWF
Trigger: GAACCATTTCTCAGTGAGGCAAATGCTCGCCACCAC...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATCACACGACCGTGGTGGCGAGCATTTaGCTCACTGAGAAATGGTTC +
Preference number: 4 (lower is better)
Translates to: ANDKASPHTRAMRCNHTTVVASI*LTEKWF
Trigger: GAACCATTTCTCAGTGAGGCAAATGCTCGCCACCAC...GGTCGTGTGATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp CGTATCCTTTTGGTTAAGTCCTTCACATCAGAGGAGAAGCTGGTGTGCTTAATAATGGGCTCTGCCCACTaGCATTCATCAGCGCCGGGG +
Preference number: 4 (lower is better)
Translates to: RILLVKSFTSEEKLVCLIMGSAH*HSSAPG
Trigger: CCCCGGCGCTGATGAATGGCAGTGGGCAGAGCCCAT...TATTAAGCACACCAGCTTCTCCTCTGATGTGAAGGACTTAACCAAAAGGATACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp CACACACGGGCCATGAGATGTAATCACACGACCGAAGACGAGCTGGTCATCCCGAAACAATGTCCTTGCTaGCCAAGCAAATGGCATTCT +
Preference number: 4 (lower is better)
Translates to: HTRAMRCNHTTEDELVIPKQCPC*PSKWHS
Trigger: AGAATGCCATTTGCTTGGGCAGCAAGGACATTGTTT...CGGGATGACCAGCTCGTCTTCGGTCGTGTGATTACATCTCATGGCCCGTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp CACACACGGGCCATGAGATGTAATCACACGACCGAAGACGAGCTGGTCATCCCGCTTAAACAATGTCCTTaGTGCCCAAGCAAATGGCAT +
Preference number: 4 (lower is better)
Translates to: HTRAMRCNHTTEDELVIPLKQCP*CPSKWH
Trigger: ATGCCATTTGCTTGGGCAGCAAGGACATTGTTTAAG...CGGGATGACCAGCTCGTCTTCGGTCGTGTGATTACATCTCATGGCCCGTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTGAGTGTGTTTTGGTATaGAGGGCACAAATTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GVTGIRDLYFRAWLRGFSECVLV*RAQIPP
Trigger: TGGAGGAATTTGTGCCCTGCATACCAAAACACACTC...ACTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp CAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACCGGACCATAATGCCTaGCCATCCCAAGCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: QGMAEGFQLLTITSRKRIPDHNA*PSQAPG
Trigger: ACCAGGAGCTTGGGATGGGCAGGCATTATGGTCCGG...TATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp CTGAGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGTTTTGGCCTTCCATCGCATaGAGACTCTTAAGGTACTTT +
Preference number: 4 (lower is better)
Translates to: LRSHRHPGPLFQGMAEGFWPSIA*RLLRYF
Trigger: AAAGTACCTTAAGAGTCTGCATGCGATGGAAGGCCA...AAACCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp CCGAAGGAAGGTTCGCCGAGACCGGGATGTGCTGCTCGCTTGTCACCACCCTTCTATAATGTTCATGGTTaGACACTACACGGAGAAATT +
Preference number: 4 (lower is better)
Translates to: PKEGSPRPGCAARLSPPFYNVHG*TLHGEI
Trigger: AATTTCTCCGTGTAGTGTGCAACCATGAACATTATA...GAAGGGTGGTGACAAGCGAGCAGCACATCCCGGTCTCGGCGAACCTTCCTTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR GCA 90 bp ATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGGGCTGTTGTCCAGGGTaGTTCCCTTCTGCGGCGTCA +
Preference number: 4 (lower is better)
Translates to: MAEGFQLLTITSRKRILRGCCPG*FPSAAS
Trigger: TGACGCCGCAGAAGGGAAGCACCCTGGACAACAGCC...CCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp CACGTGTTTTTCTCTCAGAGGTGGCCGCTCTTCTGTTATTTCACACAGAAAAAGGGCTGTTGTCCAGGGTaGTTCCCTTCTGCGGCGTCA +
Preference number: 4 (lower is better)
Translates to: HVFFSQRWPLFCYFTQKKGCCPG*FPSAAS
Trigger: TGACGCCGCAGAAGGGAAGCACCCTGGACAACAGCC...CTTTTTCTGTGTGAAATAACAGAAGAGCGGCCACCTCTGAGAGAAAAACACGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR GCA 90 bp GTAGGCCCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCGAAGCATCATCAGACATaGTCTTTAAGATGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: VGPVQRVIQMGQPLKIPPKHHQT*SLRCRG
Trigger: TCCTCTACATCTTAAAGAGCATGTCTGATGATGCTT...CGGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGGGCCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp CTCGGCTTTCCAGAGTCCATCTGCGCACTGCTCAAGGAGCTCCATCAGCACATCATGTACTGGAACTGGTaGAGGCAGACTTCAGATATT +
Preference number: 4 (lower is better)
Translates to: LGFPESICALLKELHQHIMYWNW*RQTSDI
Trigger: AATATCTGAAGTCTGCCTGCACCAGTTCCAGTACAT...GATGTGCTGATGGAGCTCCTTGAGCAGTGCGCAGATGGACTCTGGAAAGCCGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp GAGAGATCGCCATTTTTGACATGGATCCTGGCCATGCTGTCGAGCCACGTCTTCTGCTGCAATCTGGCATaGATCATTCCTGTTCCAAGC +
Preference number: 4 (lower is better)
Translates to: ERSPFLTWILAMLSSHVFCCNLA*IIPVPS
Trigger: GCTTGGAACAGGAATGATGCATGCCAGATTGCAGCA...GAAGACGTGGCTCGACAGCATGGCCAGGATCCATGTCAAAAATGGCGATCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR GCA 90 bp CCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATTCTGGGTCGTTCTCATaGTCCTTCATCTGGGCGGTG +
Preference number: 4 (lower is better)
Translates to: PEFANDKASPHTRAMRCNSGSFS*SFIWAV
Trigger: CACCGCCCAGATGAAGGAGCATGAGAACGACCCAGA...ATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp ACAGAGCCGCACACATGTCCGCTCTCCCTTCATAGAATGTTGAGGGAAACTTATTCTGGGTCGTTCTCATaGTCCTTCATCTGGGCGGTG +
Preference number: 4 (lower is better)
Translates to: TEPHTCPLSLHRMLRETYSGSFS*SFIWAV
Trigger: CACCGCCCAGATGAAGGAGCATGAGAACGACCCAGA...ATAAGTTTCCCTCAACATTCTATGAAGGGAGAGCGGACATGTGTGCGGCTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp GCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATCACACGACCTTCAGGTCAGTGTGGTaGTGGTACATGACAGGGATG +
Preference number: 4 (lower is better)
Translates to: ANDKASPHTRAMRCNHTTFRSVW*WYMTGM
Trigger: CATCCCTGTCATGTACCAGCACCACACTGACCTGAA...GGTCGTGTGATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGAGCAGTCACCGGTACTaGAACAGAAGGGAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: GFGKHPEFANDKASPHTRSSHRY*NRREAL
Trigger: CAGAGCTTCCCTTCTGTTCCAGTACCGGTGACTGCT...CCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448493.7
CDS-3UTR CCA 90 bp GTGCTTAATAAGCCGGTCACTGTTGGCACAGTTGTTGATGATGGACAGGGACTGCCTGTCGTCTCAGGATaGCCGTCTGAAAGTCATCGT +
Preference number: 4 (lower is better)
Translates to: VLNKPVTVGTVVDDGQGLPVVSG*PSESHR
Trigger: ACGATGACTTTCAGACGGCCATCCTGAGACGACAGG...CAGTCCCTGTCCATCATCAACAACTGTGCCAACAGTGACCGGCTTATTAAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp GGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCGTGATCCCACCCTTCTaGGAACCAAGGGAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: GMAEGFQLLTITSRKRILVIPPF*EPREAA
Trigger: TGCTGCCTCCCTTGGTTCCCAGAAGGGTGGGATCAC...GAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACGTGATCCCACCCTTCTaGGAACCAAGGGAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: VIGFGKHPEFANDKASPHVIPPF*EPREAA
Trigger: TGCTGCCTCCCTTGGTTCCCAGAAGGGTGGGATCAC...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCCTTCTCTTGCACTCTTaGCAAGTTCCGGCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRALLLHS*QVPAGS
Trigger: GCTACCTGCCGGAACTTGCCAAGAGTGCAAGAGAAG...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTGTCTTGCCTGTAGATaGCAGAAAATCTGGCATTTT +
Preference number: 4 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTCLACR*QKIWHF
Trigger: AAAATGCCAGATTTTCTGCCATCTACAGGCAAGACA...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TGTAGGCCCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCAAACGTAAAGGTGATTaGTGTAGATGGTGTAAGGCT +
Preference number: 4 (lower is better)
Translates to: CRPGAACHTDGPASQNPSKRKGD*CRWCKA
Trigger: AGCCTTACACCATCTACACCAATCACCTTTACGTTT...GGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGGGCCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCAAACGTAAAGGTGATTaGTGTAGATGGTGTAAGGCT +
Preference number: 4 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTKRKGD*CRWCKA
Trigger: AGCCTTACACCATCTACACCAATCACCTTTACGTTT...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGGCTTCTTGTGAAAACTaGCCCACCAGGTCTGCCATA +
Preference number: 4 (lower is better)
Translates to: GKHPEFANDKASPHTRAMASCEN*PTRSAI
Trigger: TATGGCAGACCTGGTGGGCCAGTTTTCACAAGAAGC...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000652315.1
CDS-3UTR CCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTGCTTCTTGTGAAAACTaGCCCACCAGGTCTGCCATA +
Preference number: 4 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFASCEN*PTRSAI
Trigger: TATGGCAGACCTGGTGGGCCAGTTTTCACAAGAAGC...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000652315.1
CDS-3UTR CCA 90 bp GCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATCACACGACCGCTTCTTGTGAAAACTaGCCCACCAGGTCTGCCATA +
Preference number: 4 (lower is better)
Translates to: ANDKASPHTRAMRCNHTTASCEN*PTRSAI
Trigger: TATGGCAGACCTGGTGGGCCAGTTTTCACAAGAAGC...GGTCGTGTGATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000652315.1
CDS-3UTR CCA 90 bp AACTGTATGATCCTGAGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGAAGGCGATCATCACGTaGCCTTCCATCGCATGCAGA +
Preference number: 4 (lower is better)
Translates to: NCMILRSHRHPGPLFQGMKAIIT*PSIACR
Trigger: TCTGCATGCGATGGAAGGCCACGTGATGATCGCCTT...CATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCTCAGGATCATACAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp ATGACTGGTGCAGAACATCTGCGTCCGAGTGGCCATAGCCATTGTCTACAGAAAAAGGCGATCATCACGTaGCCTTCCATCGCATGCAGA +
Preference number: 4 (lower is better)
Translates to: MTGAEHLRPSGHSHCLQKKAIIT*PSIACR
Trigger: TCTGCATGCGATGGAAGGCCACGTGATGATCGCCTT...TTTCTGTAGACAATGGCTATGGCCACTCGGACGCAGATGTTCTGCACCAGTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGGACTCGGAACAGCTaGTTTAGGATAGTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: GKHPEFANDKASPHTRAMRTRNS*FRIVGK
Trigger: CTTGCCCACTATCCTAAACCAGCTGTTCCGAGTCCT...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GTCAGTGCGGAGCAATTGGAGGCTATGATGCTAAAGATCCCCAGTGGCCTATCTAGGACTCGGAACAGCTaGTTTAGGATAGTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: VSAEQLEAMMLKIPSGLSRTRNS*FRIVGK
Trigger: CTTGCCCACTATCCTAAACCAGCTGTTCCGAGTCCT...AGATAGGCCACTGGGGATCTTTAGCATCATAGCCTCCAATTGCTCCGCACTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp CACACACGGGCCATGAGATGTAATCACACGACCGAAGACGAGCTGGTCATCCCGGATGCAGGAAATCTCTaGTTTCGCAGCAACTTAACT +
Preference number: 4 (lower is better)
Translates to: HTRAMRCNHTTEDELVIPDAGNL*FRSNLT
Trigger: AGTTAAGTTGCTGCGAAACCAGAGATTTCCTGCATC...CGGGATGACCAGCTCGTCTTCGGTCGTGTGATTACATCTCATGGCCCGTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TGTAGGCCCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCCTTCTGAGTGATGTGTaGCATCAGCATATTTACAAC +
Preference number: 4 (lower is better)
Translates to: CRPGAACHTDGPASQNPSLLSDV*HQHIYN
Trigger: GTTGTAAATATGCTGATGCCACACATCACTCAGAAG...GGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGGGCCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp AGGGACTGCTGGAATCTGGTTCCCCCAATGCCAACAACGTCTGCTATCAGCTGGCTCACTATTCCTTTCTaGAAGGCTGTTACCCGAATC +
Preference number: 4 (lower is better)
Translates to: RDCWNLVPPMPTTSAISWLTIPF*KAVTRI
Trigger: GATTCGGGTAACAGCCTTCCAGAAAGGAATAGTGAG...CCAGCTGATAGCAGACGTTGTTGGCATTGGGGGAACCAGATTCCAGCAGTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGCCCATGTACTGGAACTaGTGCAGGCAGACTTCAGAT +
Preference number: 4 (lower is better)
Translates to: GKHPEFANDKASPHTRAMPMYWN*CRQTSD
Trigger: ATCTGAAGTCTGCCTGCACCAGTTCCAGTACATGGG...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GTTCCCTTAGGACTGCTGAACAATAAACACCCAGCAGCCACCCCAAATGGTCAGCCCATGTACTGGAACTaGTGCAGGCAGACTTCAGAT +
Preference number: 4 (lower is better)
Translates to: VPLGLLNNKHPAATPNGQPMYWN*CRQTSD
Trigger: ATCTGAAGTCTGCCTGCACCAGTTCCAGTACATGGG...CTGACCATTTGGGGTGGCTGCTGGGTGTTTATTGTTCAGCAGTCCTAAGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448493.7
CDS-3UTR CCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTCCAGCTGCTGCAATCTaGCATGCATCATTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFPAAAI*HASFLF
Trigger: GAACAGGAATGATGCATGCCAGATTGCAGCAGCTGG...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000652315.1
CDS-3UTR CCA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGGGGACTGCTGGAATCTaGTTCCCCCAATGCCAACAA +
Preference number: 4 (lower is better)
Translates to: ALESILSLQMTKQVPTHGGTAGI*FPQCQQ
Trigger: TTGTTGGCATTGGGGGAACCAGATTCCAGCAGTCCC...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp CTGGTTCCCCCAATGCCAACAACGTCTGCTATCAGCTGGCTGACAGATATGATGTCGCCATTTTTGACATaGATCCTGGCCATGCTGTCG +
Preference number: 4 (lower is better)
Translates to: LVPPMPTTSAISWLTDMMSPFLT*ILAMLS
Trigger: CGACAGCATGGCCAGGATCCATGTCAAAAATGGCGA...CATCATATCTGTCAGCCAGCTGATAGCAGACGTTGTTGGCATTGGGGGAACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGTCGCCATTTTTGACATaGATCCTGGCCATGCTGTCG +
Preference number: 4 (lower is better)
Translates to: GKHPEFANDKASPHTRAMSPFLT*ILAMLS
Trigger: CGACAGCATGGCCAGGATCCATGTCAAAAATGGCGA...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTTCGCCATTTTTGACATaGATCCTGGCCATGCTGTCG +
Preference number: 4 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFSPFLT*ILAMLS
Trigger: CGACAGCATGGCCAGGATCCATGTCAAAAATGGCGA...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGTCACTGTCTGTAAACTaGTATTGCGCTGCCTGCCCG +
Preference number: 4 (lower is better)
Translates to: ALESILSLQMTKQVPTHGSLSVN*YCAACP
Trigger: CGGGCAGGCAGCGCAATACCAGTTTACAGACAGTGA...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000652315.1
CDS-3UTR CCA 90 bp GCTTCTTCACATAAGGGAAGCAGTGTATGGCTGTCAGGATGGTGCGCCGTTTGCAAGCGGCGGATGTTGTaGGATCTCTCAAACTCTGTT +
Preference number: 4 (lower is better)
Translates to: ASSHKGSSVWLSGWCAVCKRRML*DLSNSV
Trigger: AACAGAGTTTGAGAGATCCCACAACATCCGCCGCTT...GCAAACGGCGCACCATCCTGACAGCCATACACTGCTTCCCTTATGTGAAGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp GCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATCACACGACCCCCGGTCTGCGTAAATaGCATCTCAAACATGAAGCG +
Preference number: 4 (lower is better)
Translates to: ANDKASPHTRAMRCNHTTPGLRK*HLKHEA
Trigger: CGCTTCATGTTTGAGATGCCATTTACGCAGACCGGG...GGTCGTGTGATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCACACTCACGCTGCCCTaGAGTTTGAGCTGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRATLTLP*SLSCSL
Trigger: CAAACTGCAGCTCAAACTCCAGGGCAGCGTGAGTGT...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGAAACTCTCCCCTTCCCCTTaGTCCTCCCTGTGCTCGGTC +
Preference number: 4 (lower is better)
Translates to: AEGFQLLTITSRKRILRKLSPSP*SSLCSV
Trigger: GACCGAGCACAGGGAGGACCAAGGGGAAGGGGAGAG...TTTCCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp CAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATATACCAATGCCGGAGATaGCGCCCAGCAGGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: QGMAEGFQLLTITSRKRIYQCRR*RPAGPC
Trigger: ACAAGGACCTGCTGGGCGCCATCTCCGGCATTGGTA...TATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp CTTTGCCTCAGGTCACTTAATGAAAGAACTCCTAGTGACCTCATAGGGCAGAGGGGAAAAGGGATCAACTaGGAGTGGCTCACCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LCLRSLNERTPSDLIGQRGKGIN*EWLTCC
Trigger: GCAGCAGGTGAGCCACTCCCAGTTGATCCCTTTTCC...CCTCTGCCCTATGAGGTCACTAGGAGTTCTTTCATTAAGTGACCTGAGGCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479769.1
CDS-3UTR CCA 90 bp GAAGTAGAGCAGCTGGGAGGCCTCCGTCCTGATGGAGCTCAGCTTGGAGTTACATTTTTCTCTCAGAGGTaGCCGCTCTTCTGTTATTTC +
Preference number: 4 (lower is better)
Translates to: EVEQLGGLRPDGAQLGVTFFSQR*PLFCYF
Trigger: GAAATAACAGAAGAGCGGCCACCTCTGAGAGAAAAA...TGTAACTCCAAGCTGAGCTCCATCAGGACGGAGGCCTCCCAGCTGCTCTACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp TGTTGGCTTCAAGTAATGACTGGTGCAGAACATCTGCGTCCGAGTGGCCATAGCTGGCATCAGGAGATTTaGACTCTGTGTCTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: CWLQVMTGAEHLRPSGHSWHQEI*TLCLAA
Trigger: AGCTGCCAGACACAGAGTCCAAATCTCCTGATGCCA...GCTATGGCCACTCGGACGCAGATGTTCTGCACCAGTCATTACTTGAAGCCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCAAGGCCTGGCTGGTTTaGCAGATGGCATCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRAKAWLV*QMASGD
Trigger: ATCTCCTGATGCCATCTGCCAAACCAGCCAGGCCTT...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGACTGTACCATCTTCGTaGCAAGCAGTCACCGGTACT +
Preference number: 4 (lower is better)
Translates to: ALESILSLQMTKQVPTHGTVPSS*QAVTGT
Trigger: AGTACCGGTGACTGCTTGTCACGAAGATGGTACAGT...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448493.7
CDS-3UTR TCA 90 bp TGGGAGGCCTCCGTCCTGATGGAGCTCAGCTTGGAGTTACAGCACTTGAGAATCGAAGTTTATCCAACTTaGCCACTTTGTTCGGAAGCT +
Preference number: 4 (lower is better)
Translates to: WEASVLMELSLELQHLRIEVYPT*PLCSEA
Trigger: AGCTTCCGAACAAAGTGGTCAAGTTGGATAAACTTC...GATTCTCAAGTGCTGTAACTCCAAGCTGAGCTCCATCAGGACGGAGGCCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR TCA 90 bp AGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGGAAGTTTATCCAACTTaGCCACTTTGTTCGGAAGCT +
Preference number: 4 (lower is better)
Translates to: RSHRHPGPLFQGMAEGFQEVYPT*PLCSEA
Trigger: AGCTTCCGAACAAAGTGGTCAAGTTGGATAAACTTC...CTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp AAGAATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACGCCAGCCATGCTTGGTaGTCCCACCCTTCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: KNTQESNLDFKVLPHKCDASHAW*SHPSGN
Trigger: GTTCCCAGAAGGGTGGGATCACCAAGCATGGCTGGC...GTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp ACAGAGCCGCACACATGTCCGCTCTCCCTTCATAGAATGTTGAGGGAAACTTATACCTCATGGTCACGCTaGTGGCACTGTTCATGTTGC +
Preference number: 4 (lower is better)
Translates to: TEPHTCPLSLHRMLRETYTSWSR*WHCSCC
Trigger: GCAACATGAACAGTGCCATCAGCGTGACCATGAGGT...ATAAGTTTCCCTCAACATTCTATGAAGGGAGAGCGGACATGTGTGCGGCTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR TCA 90 bp CTTTCCAGAGTCCATCTGCGCACTGCTCAAGGAGCTCCATCAGCACATCCTCGTAAACTTCTCTTCAAATaGCTTCACTTCTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: LSRVHLRTAQGAPSAHPRKLLFK*LHFWLS
Trigger: GCTGAGCCAGAAGTGAAGTCATTTGAAGAGAAGTTT...ACGAGGATGTGCTGATGGAGCTCCTTGAGCAGTGCGCAGATGGACTCTGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR TCA 90 bp ATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACATGAAGGATGCCCTTaGGGACAGATGGGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: IGFGKHPEFANDKASPHTHEGCP*GQMGSA
Trigger: GGCAGAGCCCATCTGTCCTCAAGGGCATCCTTCATG...TGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAACATGAAGGATGCCCTTaGGGACAGATGGGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: LFQGMAEGFQLLTITSRKHEGCP*GQMGSA
Trigger: GGCAGAGCCCATCTGTCCTCAAGGGCATCCTTCATG...TTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACTGCATGGCGGCTTCATaGAGGATGCCCTTGAGGACA +
Preference number: 4 (lower is better)
Translates to: VIGFGKHPEFANDKASPHCMAAS*RMPLRT
Trigger: TGTCCTCAAGGGCATCCTTCATGAAGCCGCCATGCA...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAGCTCAGCGCAATGTGTaGTGCTCCCCTGAAGGACTT +
Preference number: 4 (lower is better)
Translates to: FQGMAEGFQLLTITSRKRAQRNV*CSPEGL
Trigger: AAGTCCTTCAGGGGAGCATCACACATTGCGCTGAGC...TCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp GGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGCCTCCACTTCAAACGTaGTGGGAGTTTTACTGCAGG +
Preference number: 4 (lower is better)
Translates to: GFGKHPEFANDKASPHTRPPLQT*WEFYCR
Trigger: CCTGCAGTAAAACTCCCATCACGTTTGAAGTGGAGG...CCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GTTCCCTTAGGACTGCTGAACAATAAACACCCAGCAGCCACCCCAAATGGTCAGATGCACTTAAGGGGCTaGGAGTCTTCCTCATCTGAA +
Preference number: 4 (lower is better)
Translates to: VPLGLLNNKHPAATPNGQMHLRG*ESSSSE
Trigger: TTCAGATGAGGAAGACTCTCAGCCCCTTAAGTGCAT...CTGACCATTTGGGGTGGCTGCTGGGTGTTTATTGTTCAGCAGTCCTAAGGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448493.7
CDS-3UTR TCA 90 bp CCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATCACTGGGCAACCACATaGATAATGACCCGAGTCACG +
Preference number: 4 (lower is better)
Translates to: PEFANDKASPHTRAMRCNHWATT*IMTRVT
Trigger: CGTGACTCGGGTCATTATTCATGTGGTTGCCCAGTG...ATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp CTTCAAGTAATGACTGGTGCAGAACATCTGCGTCCGAGTGGCCATAGCTGTGGTAATCGGCAGAAGGCTTaGGAATCGTGGTCATGGATT +
Preference number: 4 (lower is better)
Translates to: LQVMTGAEHLRPSGHSCGNRQKA*ESWSWI
Trigger: AATCCATGACCACGATTCTCAAGCCTTCTGCCGATT...ACCACAGCTATGGCCACTCGGACGCAGATGTTCTGCACCAGTCATTACTTGAAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR TCA 90 bp CTTCAAGTAATGACTGGTGCAGAACATCTGCGTCCGAGTGGCCATAGCTGTGGTAAGACAGCAAGGCTATaGTTCGCGTTCTTAGATGCC +
Preference number: 4 (lower is better)
Translates to: LQVMTGAEHLRPSGHSCGKTARL*FAFLDA
Trigger: GGCATCTAAGAACGCGAATCATAGCCTTGCTGTCTT...ACCACAGCTATGGCCACTCGGACGCAGATGTTCTGCACCAGTCATTACTTGAAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR TCA 90 bp ATCCTGAGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGAGGTCTTGGTATCTTTaGATCCTGCCTTTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: ILRSHRHPGPLFQGMAEGRSWYL*ILPFPN
Trigger: ATTTGGAAAAGGCAGGATTCAAAGATACCAAGACCT...CCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCTCAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp AGCGCTCGGCTTTCCAGAGTCCATCTGCGCACTGCTCAAGGAGCTCCATCAGCACATAAGTTCAGATGTTaGAGCCTTGTTCCAATATGT +
Preference number: 4 (lower is better)
Translates to: SARLSRVHLRTAQGAPSAHKFRC*SLVPIC
Trigger: ACATATTGGAACAAGGCTTCAACATCTGAACTTATG...TGCTGATGGAGCTCCTTGAGCAGTGCGCAGATGGACTCTGGAAAGCCGAGCGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR TCA 90 bp CCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACGAGCCACGTCTTCCTaGGCTCGGGCGTGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: PGSLVQKLQWSVPLGHQKRATSS*ARACWH
Trigger: ATGCCAGCACGCCCGAGCTCAGGAAGACGTGGCTCG...TTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAACGAGCCACGTCTTCCTaGGCTCGGGCGTGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNERATSS*ARACWH
Trigger: ATGCCAGCACGCCCGAGCTCAGGAAGACGTGGCTCG...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCGCACATTGCTGCCTCTaGGAGATCGCCATTTTTGAC +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRAAHCCL*EIAIFD
Trigger: GTCAAAAATGGCGATCTCTCAGAGGCAGCAATGTGC...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp CATGAGAGGATTATGTCCATGGTCGGCCAGGAGCTGGTTCTTAAACGCCAATGTCTGCTTCTTTCCGTGTaGGATATTCTGCCACTAGGG +
Preference number: 4 (lower is better)
Translates to: HERIMSMVGQELVLKRQCLLLSV*DILPLG
Trigger: CCCTAGTGGCAGAATATCTCACACGGAAAGAAGCAG...ACATTGGCGTTTAAGAACCAGCTCCTGGCCGACCATGGACATAATCCTCTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR TCA 90 bp GGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGCTGCTTCTTTCCGTGTaGGATATTCTGCCACTAGGG +
Preference number: 4 (lower is better)
Translates to: GFGKHPEFANDKASPHTRLLLSV*DILPLG
Trigger: CCCTAGTGGCAGAATATCTCACACGGAAAGAAGCAG...CCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000652315.1
CDS-3UTR TCA 90 bp GGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGTCAGCACATCCTCGTTaGAATGGACATCCTGCATCC +
Preference number: 4 (lower is better)
Translates to: GFGKHPEFANDKASPHTRSAHPR*NGHPAS
Trigger: GGATGCAGGATGTCCATTTCAACGAGGATGTGCTGA...CCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCTCAGCACATCCTCGTTaGAATGGACATCCTGCATCC +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRASAHPR*NGHPAS
Trigger: GGATGCAGGATGTCCATTTCAACGAGGATGTGCTGA...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCTGCATTCTCGGCTaGAAACGCAAGTCAGAAAGT +
Preference number: 4 (lower is better)
Translates to: GFGKHPEFANDKASPHTRACILG*KRKSES
Trigger: ACTTTCTGACTTGCGTTTTCAGCCGAGAATGCAGGC...CCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
CDS-3UTR TCA 90 bp ATGACTGGTGCAGAACATCTGCGTCCGAGTGGCCATAGCCATTGTCTACAGAAAGCCTGCATTCTCGGCTaGAAACGCAAGTCAGAAAGT +
Preference number: 4 (lower is better)
Translates to: MTGAEHLRPSGHSHCLQKACILG*KRKSES
Trigger: ACTTTCTGACTTGCGTTTTCAGCCGAGAATGCAGGC...TTTCTGTAGACAATGGCTATGGCCACTCGGACGCAGATGTTCTGCACCAGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp CCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATATGGCATCTCAAACATaGAGCGGCGGATGTTGTGGG +
Preference number: 4 (lower is better)
Translates to: PEFANDKASPHTRAMRCNMASQT*SGGCCG
Trigger: CCCACAACATCCGCCGCTTCATGTTTGAGATGCCAT...ATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGTTTACCGCTAAGGCTTaGCCGCAAGCTTCCACAAAT +
Preference number: 4 (lower is better)
Translates to: GKHPEFANDKASPHTRAMFTAKA*PQASTN
Trigger: ATTTGTGGAAGCTTGCGGTCAAGCCTTAGCGGTAAA...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTTTTACCGCTAAGGCTTaGCCGCAAGCTTCCACAAAT +
Preference number: 4 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFFTAKA*PQASTN
Trigger: ATTTGTGGAAGCTTGCGGTCAAGCCTTAGCGGTAAA...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
50% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCAGCTGCTCATGCATaGTTTCAGAAAGCTCCTTCG +
Preference number: 4 (lower is better)
Translates to: ALESILSLQMTKQVPTHGPAAHA*FQKAPS
Trigger: CGAAGGAGCTTTCTGAAATCATGCATGAGCAGCTGG...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376460.5
ENST00000652315.1
CDS-3UTR TCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCCCAGCTGCTCATGCATaGTTTCAGAAAGCTCCTTCG +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRAPAAHA*FQKAPS
Trigger: CGAAGGAGCTTTCTGAAATCATGCATGAGCAGCTGG...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376460.5
ENST00000652315.1
CDS-3UTR TCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTATGGCGTTGAAGATGTaGAGGGAATTCGGTAAGACG +
Preference number: 4 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFMALKM*REFGKT
Trigger: CGTCTTACCGAATTCCCTTCACATCTTCAACGCCAT...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGATGGCGTTGAAGATGTaGAGGGAATTCGGTAAGACG +
Preference number: 4 (lower is better)
Translates to: GKHPEFANDKASPHTRAMMALKM*REFGKT
Trigger: CGTCTTACCGAATTCCCTTCACATCTTCAACGCCAT...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCGAGCTGGTCATCCCGTaGACCATTGTGCTTGTTGGA +
Preference number: 4 (lower is better)
Translates to: GPLFQGMAEGFQLLTITSELVIP*TIVLVG
Trigger: TCCAACAAGCACAATGGTTCACGGGATGACCAGCTC...GCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp AACTGTATGATCCTGAGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGAAGACACTTTCAGAGTaGTGGTGGAGAGAAGCCCAC +
Preference number: 4 (lower is better)
Translates to: NCMILRSHRHPGPLFQGMKTLSE*WWREAH
Trigger: GTGGGCTTCTCTCCACCATCACTCTGAAAGTGTCTT...CATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCTCAGGATCATACAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp GTTCCCTTAGGACTGCTGAACAATAAACACCCAGCAGCCACCCCAAATGGTCAGTGCTTGGGATTGTTCTaGATCTCAGAACCTGCCCAA +
Preference number: 4 (lower is better)
Translates to: VPLGLLNNKHPAATPNGQCLGLF*ISEPAQ
Trigger: TTGGGCAGGTTCTGAGATTCAGAACAATCCCAAGCA...CTGACCATTTGGGGTGGCTGCTGGGTGTTTATTGTTCAGCAGTCCTAAGGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448493.7
CDS-3UTR TCA 90 bp GGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGAACCCAGTTCAAAGATaGGGCTTCCCTGGAAGGTAC +
Preference number: 4 (lower is better)
Translates to: GFGKHPEFANDKASPHTRNPVQR*GFPGRY
Trigger: GTACCTTCCAGGGAAGCCTCATCTTTGAACTGGGTT...CCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp AACTGTATGATCCTGAGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGAGGAGAGTTTGCTCTTaGAGGAGAAGCACCAGGACT +
Preference number: 4 (lower is better)
Translates to: NCMILRSHRHPGPLFQGMRRVCS*RRSTRT
Trigger: AGTCCTGGTGCTTCTCCTTCAAGAGCAAACTCTCCT...CATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCTCAGGATCATACAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp ACAGAGCCGCACACATGTCCGCTCTCCCTTCATAGAATGTTGAGGGAAACTTATTTGTACATTCCGTGCTaGACCAAAAGGCGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: TEPHTCPLSLHRMLRETYLYIPC*TKRRAS
Trigger: GGAGGCACGCCTTTTGGTTCAGCACGGAATGTACAA...ATAAGTTTCCCTCAACATTCTATGAAGGGAGAGCGGACATGTGTGCGGCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp CTGGTACATGACAGGGATGCGCTTCTTCACATAAGGGAAGCAGTGTATGGCTGTGAACACAGTGATATGTaGCCTCAGCCAGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LVHDRDALLHIREAVYGCEHSDM*PQPEAA
Trigger: AGCAGCTTCTGGCTGAGGTCACATATCACTGTGTTC...ACAGCCATACACTGCTTCCCTTATGTGAAGAAGCGCATCCCTGTCATGTACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp ATGACTGGTGCAGAACATCTGCGTCCGAGTGGCCATAGCCATTGTCTACAGAAATCGAGGAGAACACAGTaGTATGTGACCTCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: MTGAEHLRPSGHSHCLQKSRRTQ*YVTSAR
Trigger: TCTGGCTGAGGTCACATATCACTGTGTTCTCCTCGA...TTTCTGTAGACAATGGCTATGGCCACTCGGACGCAGATGTTCTGCACCAGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR GCA 90 bp CCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATTTGTACAGCCAGCCATaGTTGGTGATCCCACCCTTC +
Preference number: 4 (lower is better)
Translates to: PEFANDKASPHTRAMRCNLYSQP*LVIPPF
Trigger: GAAGGGTGGGATCACCAAGCATGGCTGGCTGTACAA...ATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp AGGGACTGCTGGAATCTGGTTCCCCCAATGCCAACAACGTCTGCTATCAGCTGGTTCCACTTCACTGTCTaGTGCCAAGAGATAACTACT +
Preference number: 4 (lower is better)
Translates to: RDCWNLVPPMPTTSAISWFHFTV*CQEITT
Trigger: AGTAGTTATCTCTTGGCAGCAGACAGTGAAGTGGAA...CCAGCTGATAGCAGACGTTGTTGGCATTGGGGGAACCAGATTCCAGCAGTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp TGGGAGGCCTCCGTCCTGATGGAGCTCAGCTTGGAGTTACAGCACTTGAGAATCTCGCTTTTCTTGCATTaGAGCTTCAAAGTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: WEASVLMELSLELQHLRISLFLH*SFKVEL
Trigger: CAGCTCAACTTTGAAGCTGCAATGCAAGAAAAGCGA...GATTCTCAAGTGCTGTAACTCCAAGCTGAGCTCCATCAGGACGGAGGCCTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp GGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTTCGCTTTTCTTGCATTaGAGCTTCAAAGTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: GVTGIRDLYFRAWLRGFSSLFLH*SFKVEL
Trigger: CAGCTCAACTTTGAAGCTGCAATGCAAGAAAAGCGA...ACTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp ATCCTGAGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGCCATTTCGCTTTTCTTaGATTGCAGCTTCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: ILRSHRHPGPLFQGMAEGPFRFS*IAASKL
Trigger: CAACTTTGAAGCTGCAATGCAAGAAAAGCGAAATGG...CCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCTCAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCCAGAACCTTCCAATTTaGTTTGTTCATCATCTTCGT +
Preference number: 4 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTQNLPI*FVHHLR
Trigger: ACGAAGATGATGAACAAAGCAAATTGGAAGGTTCTG...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp CACACACGGGCCATGAGATGTAATCACACGACCGAAGACGAGCTGGTCATCCCGTTTCAGTTTGATTTCTaGTTCTCTTGCACTCTTGGC +
Preference number: 4 (lower is better)
Translates to: HTRAMRCNHTTEDELVIPFQFDF*FSCTLG
Trigger: GCCAAGAGTGCAAGAGAAGCAGAAATCAAACTGAAA...CGGGATGACCAGCTCGTCTTCGGTCGTGTGATTACATCTCATGGCCCGTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGAGTCTTTGGCATGCCTaGTTGGCATTCTTCAGCACC +
Preference number: 4 (lower is better)
Translates to: GFGKHPEFANDKASPHTRSLWHA*LAFFST
Trigger: GGTGCTGAAGAATGCCAAGCAGGCATGCCAAAGACT...CCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp AGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGCTTAAACAATGTCCTTaGTGCCCAAGCAAATGGCAT +
Preference number: 4 (lower is better)
Translates to: RSHRHPGPLFQGMAEGFQLKQCP*CPSKWH
Trigger: ATGCCATTTGCTTGGGCAGCAAGGACATTGTTTAAG...CTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp GTTACAGCACTTGAGAATCTCGTAACACAGAGCCGCACACATGTCCGCTCTCCCGAGTGTGTTTTGGTATaGAGGGCACAAATTCCTCCA +
Preference number: 4 (lower is better)
Translates to: VTALENLVTQSRTHVRSPECVLV*RAQIPP
Trigger: TGGAGGAATTTGTGCCCTGCATACCAAAACACACTC...GGGAGAGCGGACATGTGTGCGGCTCTGTGTTACGAGATTCTCAAGTGCTGTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp TTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAGAGACCGGGATGTGCTaGTCGCTTGTCACCACCCTT +
Preference number: 4 (lower is better)
Translates to: LFQGMAEGFQLLTITSRKETGMC*SLVTTL
Trigger: AAGGGTGGTGACAAGCGAGCAGCACATCCCGGTCTC...TTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp TTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAACCGGACCATAATGCCTaGCCATCCCAAGCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: LFQGMAEGFQLLTITSRKPDHNA*PSQAPG
Trigger: ACCAGGAGCTTGGGATGGGCAGGCATTATGGTCCGG...TTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp GCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGAAAAGGGTGCTTCCCTTCTaGGGCGTCACCAGCGGATTC +
Preference number: 4 (lower is better)
Translates to: AEGFQLLTITSRKRILRKRVLPF*GVTSGF
Trigger: GAATCCGCTGGTGACGCCGCAGAAGGGAAGCACCCT...TTTCCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp GGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTATGTACTGGAACTGGTaGAGGCAGACTTCAGATATT +
Preference number: 4 (lower is better)
Translates to: GVTGIRDLYFRAWLRGFSMYWNW*RQTSDI
Trigger: AATATCTGAAGTCTGCCTGCACCAGTTCCAGTACAT...ACTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR GCA 90 bp ATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACATCCAGGCTGCCCAGCTaGTGCAATCTGGCATGCATC +
Preference number: 4 (lower is better)
Translates to: IGFGKHPEFANDKASPHTSRLPS*CNLACI
Trigger: GATGCATGCCAGATTGCAGCAGCTGGGCAGCCTGGA...TGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000652315.1
CDS-3UTR GCA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGTCAAGTAATGACTGGTaGAGAACATCTGCGTCCGAG +
Preference number: 4 (lower is better)
Translates to: GKHPEFANDKASPHTRAMSSNDW*RTSASE
Trigger: CTCGGACGCAGATGTTCTGCACCAGTCATTACTTGA...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTAATGCCAACAACGTCTaGTATCAGCTGGCTGACAGA +
Preference number: 4 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFNANNV*YQLADR
Trigger: TCTGTCAGCCAGCTGATAGCAGACGTTGTTGGCATT...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTATCTGGTTCCCCCAATaGCAACAACGTCTGCTATCA +
Preference number: 4 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFIWFPQ*QQRLLS
Trigger: TGATAGCAGACGTTGTTGGCATTGGGGGAACCAGAT...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATCACACGACCATCTGGTTCCCCCAATaGCAACAACGTCTGCTATCA +
Preference number: 4 (lower is better)
Translates to: ANDKASPHTRAMRCNHTTIWFPQ*QQRLLS
Trigger: TGATAGCAGACGTTGTTGGCATTGGGGGAACCAGAT...GGTCGTGTGATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TTGATATCTTTCTCACACTGGCTATGTATCGCTTCCCCATGTACTGGAACTGGTCATGGATCCTGGCCATaGTGTCGAGCCACGTCTTCC +
Preference number: 4 (lower is better)
Translates to: LISFSHWLCIASPCTGTGHGSWP*CRATSS
Trigger: GGAAGACGTGGCTCGACAGCATGGCCAGGATCCATG...ACCAGTTCCAGTACATGGGGAAGCGATACATAGCCAGTGTGAGAAAGATATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR GCA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGTGCCTCTTCCCGGTCTaGGTAAATGGCATCTCAAAC +
Preference number: 4 (lower is better)
Translates to: ALESILSLQMTKQVPTHGCLFPV*VNGISN
Trigger: GTTTGAGATGCCATTTACGCAGACCGGGAAGAGGCA...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAAGTGCGCCGTTTGCACTaGTCTTCCACCCCGCCCTGC +
Preference number: 4 (lower is better)
Translates to: SSSRVSTTPLLRHNENFEVRRLH*SSTPPC
Trigger: GCAGGGCGGGGTGGAAGAGCAGTGCAAACGGCGCAC...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp CACACACGGGCCATGAGATGTAATCACACGACCGAAGACGAGCTGGTCATCCCGCAAGCTTCCACAAATTaGCTGAAAACTTCCTTAAGC +
Preference number: 4 (lower is better)
Translates to: HTRAMRCNHTTEDELVIPQASTN*LKTSLS
Trigger: GCTTAAGGAAGTTTTCAGGCAATTTGTGGAAGCTTG...CGGGATGACCAGCTCGTCTTCGGTCGTGTGATTACATCTCATGGCCCGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATCACACGACCCATCCCAGCTGCTCATaGATGATTTCAGAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: ANDKASPHTRAMRCNHTTHPSCS*MISESS
Trigger: GGAGCTTTCTGAAATCATGCATGAGCAGCTGGGATG...GGTCGTGTGATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376460.5
ENST00000652315.1
CDS-3UTR GCA 90 bp GTTCCCTTAGGACTGCTGAACAATAAACACCCAGCAGCCACCCCAAATGGTCAGGGGCAGATCTGCTCATaGATGATTTCAGAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: VPLGLLNNKHPAATPNGQGQICS*MISESS
Trigger: GGAGCTTTCTGAAATCATGCATGAGCAGATCTGCCC...CTGACCATTTGGGGTGGCTGCTGGGTGTTTATTGTTCAGCAGTCCTAAGGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448493.7
CDS-3UTR CCA 90 bp CCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATCTTCTCTTGCACTCTTaGCAAGTTCCGGCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: PEFANDKASPHTRAMRCNLLLHS*QVPAGS
Trigger: GCTACCTGCCGGAACTTGCCAAGAGTGCAAGAGAAG...ATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp ACTAAATCTCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTGCGCCGGGGACGTGGTaGCGAGCATTTGCCTCACTG +
Preference number: 4 (lower is better)
Translates to: TKSPGSLVQKLQWSVPLGAPGTW*RAFASL
Trigger: CAGTGAGGCAAATGCTCGCCACCACGTCCCCGGCGC...ACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGAGATTTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATCACACGACCTTCTTCAGCACCTTCTaGGCCACCTTAGAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: ANDKASPHTRAMRCNHTTFFSTF*ATLEES
Trigger: AGACTCTTCTAAGGTGGCCCAGAAGGTGCTGAAGAA...GGTCGTGTGATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp AACTGTATGATCCTGAGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGAGGACTCGGAACAGCTaGTTTAGGATAGTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: NCMILRSHRHPGPLFQGMRTRNS*FRIVGK
Trigger: CTTGCCCACTATCCTAAACCAGCTGTTCCGAGTCCT...CATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCTCAGGATCATACAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp GAGAGATCGCCATTTTTGACATGGATCCTGGCCATGCTGTCGAGCCACGTCTTCTTCAGAGGCAACATATaGCTCAGCCTTATACGCGTA +
Preference number: 4 (lower is better)
Translates to: ERSPFLTWILAMLSSHVFFRGNI*LSLIRV
Trigger: TACGCGTATAAGGCTGAGCCATATGTTGCCTCTGAA...GAAGACGTGGCTCGACAGCATGGCCAGGATCCATGTCAAAAATGGCGATCTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp CACACACGGGCCATGAGATGTAATCACACGACCGAAGACGAGCTGGTCATCCCGAATGTGCTACTTTGTTaGTGCTTATCCAGGGAATTG +
Preference number: 4 (lower is better)
Translates to: HTRAMRCNHTTEDELVIPNVLLC*CLSREL
Trigger: CAATTCCCTGGATAAGCACCAACAAAGTAGCACATT...CGGGATGACCAGCTCGTCTTCGGTCGTGTGATTACATCTCATGGCCCGTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp CATGAGAGGATTATGTCCATGGTCGGCCAGGAGCTGGTTCTTAAACGCCAATGTCCCATGTACTGGAACTaGTGCAGGCAGACTTCAGAT +
Preference number: 4 (lower is better)
Translates to: HERIMSMVGQELVLKRQCPMYWN*CRQTSD
Trigger: ATCTGAAGTCTGCCTGCACCAGTTCCAGTACATGGG...ACATTGGCGTTTAAGAACCAGCTCCTGGCCGACCATGGACATAATCCTCTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp GGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGCCCATGTACTGGAACTaGTGCAGGCAGACTTCAGAT +
Preference number: 4 (lower is better)
Translates to: GFGKHPEFANDKASPHTRPMYWN*CRQTSD
Trigger: ATCTGAAGTCTGCCTGCACCAGTTCCAGTACATGGG...CCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGGCTTCAAGTAATGACTaGTGCAGAACATCTGCGTCC +
Preference number: 4 (lower is better)
Translates to: GKHPEFANDKASPHTRAMASSND*CRTSAS
Trigger: GGACGCAGATGTTCTGCACCAGTCATTACTTGAAGC...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTGCTTCAAGTAATGACTaGTGCAGAACATCTGCGTCC +
Preference number: 4 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFASSND*CRTSAS
Trigger: GGACGCAGATGTTCTGCACCAGTCATTACTTGAAGC...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCTGGTCGGCCAGGAGCTaGTTCTTAAACGCCAATGTA +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRAWSARS*FLNANV
Trigger: TACATTGGCGTTTAAGAACCAGCTCCTGGCCGACCA...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GAGAGATCGCCATTTTTGACATGGATCCTGGCCATGCTGTCGAGCCACGTCTTCACGTCTGCTATCAGCTaGCTGACAGATATGATGACT +
Preference number: 4 (lower is better)
Translates to: ERSPFLTWILAMLSSHVFTSAIS*LTDMMT
Trigger: AGTCATCATATCTGTCAGCCAGCTGATAGCAGACGT...GAAGACGTGGCTCGACAGCATGGCCAGGATCCATGTCAAAAATGGCGATCTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp CCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATGGGACTGCTGGAATCTaGTTCCCCCAATGCCAACAA +
Preference number: 4 (lower is better)
Translates to: PEFANDKASPHTRAMRCNGTAGI*FPQCQQ
Trigger: TTGTTGGCATTGGGGGAACCAGATTCCAGCAGTCCC...ATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp ATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACCTTCATCTGGGCGGTaGCCATTAGCACCGTGCGTA +
Preference number: 4 (lower is better)
Translates to: IGFGKHPEFANDKASPHTPSSGR*PLAPCV
Trigger: TACGCACGGTGCTAATGGCCACCGCCCAGATGAAGG...TGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCTCGCCATTTTTGACATaGATCCTGGCCATGCTGTCG +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRASPFLT*ILAMLS
Trigger: CGACAGCATGGCCAGGATCCATGTCAAAAATGGCGA...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp ATGACTGGTGCAGAACATCTGCGTCCGAGTGGCCATAGCCATTGTCTACAGAAATCGCCATTTTTGACATaGATCCTGGCCATGCTGTCG +
Preference number: 4 (lower is better)
Translates to: MTGAEHLRPSGHSHCLQKSPFLT*ILAMLS
Trigger: CGACAGCATGGCCAGGATCCATGTCAAAAATGGCGA...TTTCTGTAGACAATGGCTATGGCCACTCGGACGCAGATGTTCTGCACCAGTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp ACTAAATCTCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCTCAGGCAGGCGCTATaGCTGTGGGGGAGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: TKSPGSLVQKLQWSVPLGLRQAL*LWGRRG
Trigger: GCCCCTTCTCCCCCACAGCCATAGCGCCTGCCTGAG...ACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGAGATTTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000652315.1
CDS-3UTR CCA 90 bp CCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATCTCCTCGTCGATGTTTaGGGTAATGACCCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: PEFANDKASPHTRAMRCNLLVDV*GNDPEG
Trigger: GCCTTCAGGGTCATTACCCCAAACATCGACGAGGAG...ATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGACCACGTCTTCCATCATaGAGGCCTCCTCGTCGATGT +
Preference number: 4 (lower is better)
Translates to: FQGMAEGFQLLTITSRKRPRLPS*RPPRRC
Trigger: ACATCGACGAGGAGGCCTCCATGATGGAAGACGTGG...TCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp GGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGAGCGTGTCATACAGATaGGCCAGCCTCTCAAAATCC +
Preference number: 4 (lower is better)
Translates to: GFGKHPEFANDKASPHTRSVSYR*ASLSKS
Trigger: GGATTTTGAGAGGCTGGCCCATCTGTATGACACGCT...CCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCAGCGTGTCATACAGATaGGCCAGCCTCTCAAAATCC +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRASVSYR*ASLSKS
Trigger: GGATTTTGAGAGGCTGGCCCATCTGTATGACACGCT...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGGCATCATTCCTGTTCTaGCTATGTATCGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: GKHPEFANDKASPHTRAMASFLF*LCIASP
Trigger: TGGGGAAGCGATACATAGCCAGAACAGGAATGATGC...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000652315.1
CDS-3UTR CCA 90 bp GTTCCCTTAGGACTGCTGAACAATAAACACCCAGCAGCCACCCCAAATGGTCAGGCATCATTCCTGTTCTaGCTATGTATCGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: VPLGLLNNKHPAATPNGQASFLF*LCIASP
Trigger: TGGGGAAGCGATACATAGCCAGAACAGGAATGATGC...CTGACCATTTGGGGTGGCTGCTGGGTGTTTATTGTTCAGCAGTCCTAAGGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448493.7
CDS-3UTR CCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTAAGCGGCGGATGTTGTaGGATCTCTCAAACTCTGTT +
Preference number: 4 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFKRRML*DLSNSV
Trigger: AACAGAGTTTGAGAGATCCCACAACATCCGCCGCTT...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCCGGTCTGCGTAAATaGCATCTCAAACATGAAGCG +
Preference number: 4 (lower is better)
Translates to: ALESILSLQMTKQVPTHGPGLRK*HLKHEA
Trigger: CGCTTCATGTTTGAGATGCCATTTACGCAGACCGGG...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCCCCGGTCTGCGTAAATaGCATCTCAAACATGAAGCG +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRAPGLRK*HLKHEA
Trigger: CGCTTCATGTTTGAGATGCCATTTACGCAGACCGGG...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACGTATGGCTGTCAGGATaGTGCGCCGTTTGCACTGCT +
Preference number: 4 (lower is better)
Translates to: VIGFGKHPEFANDKASPHVWLSG*CAVCTA
Trigger: AGCAGTGCAAACGGCGCACCATCCTGACAGCCATAC...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACAGGTCAGTGTGGTGCTaGTACATGACAGGGATGCGC +
Preference number: 4 (lower is better)
Translates to: VIGFGKHPEFANDKASPHRSVWC*YMTGMR
Trigger: GCGCATCCCTGTCATGTACCAGCACCACACTGACCT...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp AATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACACGTACCAATGCCGGAGATaGCGCCCAGCAGGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: NTQESNLDFKVLPHKCDTYQCRR*RPAGPC
Trigger: ACAAGGACCTGCTGGGCGCCATCTCCGGCATTGGTA...CGTGTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp AGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGACGTTCACCAACTATTaGCTCCAAGACACTTTCAGA +
Preference number: 4 (lower is better)
Translates to: RSHRHPGPLFQGMAEGFQTFTNY*LQDTFR
Trigger: TCTGAAAGTGTCTTGGAGCCAATAGTTGGTGAACGT...CTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
3UTR CAA 72 bp GATGTTTGGGGTAATGACCCTGAAGGCGGTGCATCCTaGTCTAAACACGCCTTTCCGTGTGAGATATTCTGC +
Preference number: 4 (lower is better)
Translates to: DVWGNDPEGGAS*SKHAFPCEIFC
Trigger: GCAGAATATCTCACACGGAAAGGCGTGTTTAGACAAGGATGCACCGCCTTCAGGGTCATTACCCCAAACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp GGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCCAGTCGTTCAGGATCTaGGTCTTCTTCTGGACGATG +
Preference number: 4 (lower is better)
Translates to: GPLFQGMAEGFQLLTITSQSFRI*VFFWTM
Trigger: CATCGTCCAGAAGAAGACTCAGATCCTGAACGACTG...GCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp GGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCCTTCGCAGGCACTGTTaGGCATATGTATCGACCCTG +
Preference number: 4 (lower is better)
Translates to: GMAEGFQLLTITSRKRILLRRHC*AYVSTL
Trigger: CAGGGTCGATACATATGCTCAACAGTGCCTGCGAAG...GAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp TTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAATGCATGGCGGCTTCATaGAGGATGCCCTTGAGGACA +
Preference number: 4 (lower is better)
Translates to: LFQGMAEGFQLLTITSRKCMAAS*RMPLRT
Trigger: TGTCCTCAAGGGCATCCTTCATGAAGCCGCCATGCA...TTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp AATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACACGTGCATGGCGGCTTCATaGAGGATGCCCTTGAGGACA +
Preference number: 4 (lower is better)
Translates to: NTQESNLDFKVLPHKCDTCMAAS*RMPLRT
Trigger: TGTCCTCAAGGGCATCCTTCATGAAGCCGCCATGCA...CGTGTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp TTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAGCTCAGCGCAATGTGTaGTGCTCCCCTGAAGGACTT +
Preference number: 4 (lower is better)
Translates to: LFQGMAEGFQLLTITSRKAQRNV*CSPEGL
Trigger: AAGTCCTTCAGGGGAGCATCACACATTGCGCTGAGC...TTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp AATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACACGCAAAGGCGCTTCTTGTaGAAACTGGCCCACCAGGTC +
Preference number: 4 (lower is better)
Translates to: NTQESNLDFKVLPHKCDTQRRFL*KLAHQV
Trigger: GACCTGGTGGGCCAGTTTTCACAAGAAGCGCCTTTG...CGTGTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp TTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAACAAAGGCGCTTCTTGTaGAAACTGGCCCACCAGGTC +
Preference number: 4 (lower is better)
Translates to: LFQGMAEGFQLLTITSRKQRRFL*KLAHQV
Trigger: GACCTGGTGGGCCAGTTTTCACAAGAAGCGCCTTTG...TTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp CTGGAATCTGGTTCCCCCAATGCCAACAACGTCTGCTATCAGCTGGCTGACAGATGCTTTTCATGCAGCTaGGTGGGCAACTCTATTTTA +
Preference number: 4 (lower is better)
Translates to: LESGSPNANNVCYQLADRCFSCS*VGNSIL
Trigger: TAAAATAGAGTTGCCCACTCAGCTGCATGAAAAGCA...TCTGTCAGCCAGCTGATAGCAGACGTTGTTGGCATTGGGGGAACCAGATTCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR TCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCCGTGCTTCCTTTACTTaGGTTGTCACAGCTGACATG +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRARASFT*VVTADM
Trigger: CATGTCAGCTGTGACAACTCAAGTAAAGGAAGCACG...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp CAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACACTGGGCAACCACATaGATAATGACCCGAGTCACG +
Preference number: 4 (lower is better)
Translates to: QGMAEGFQLLTITSRKRIHWATT*IMTRVT
Trigger: CGTGACTCGGGTCATTATTCATGTGGTTGCCCAGTG...TATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp GGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGCGCGTACTTAACATATaGCCTCAAGTGGCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: GFGKHPEFANDKASPHTRRVLNI*PQVALQ
Trigger: TTGGAGAGCCACTTGAGGTCATATGTTAAGTACGCG...CCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCCGCGTACTTAACATATaGCCTCAAGTGGCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRARVLNI*PQVALQ
Trigger: TTGGAGAGCCACTTGAGGTCATATGTTAAGTACGCG...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp ATCCTGAGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGTTCTCTATCAAATGCTaGGCCATAGATTTGATCAGT +
Preference number: 4 (lower is better)
Translates to: ILRSHRHPGPLFQGMAEGFSIKC*AIDLIS
Trigger: ACTGATCAAATCTATGGCTCAGCATTTGATAGAGAA...CCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCTCAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTCTCGAAACTTCTGAGTaGTGTGTGGCATCAGCATAT +
Preference number: 4 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFLETSE*CVASAY
Trigger: ATATGCTGATGCCACACATCACTCAGAAGTTTCGAG...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTTTATCTCGAAACTTCTaGGTGATGTGTGGCATCAGC +
Preference number: 4 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFLSRNF*VMCGIS
Trigger: GCTGATGCCACACATCACTCAGAAGTTTCGAGATAA...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
49% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGTTATCTCGAAACTTCTaGGTGATGTGTGGCATCAGC +
Preference number: 4 (lower is better)
Translates to: GKHPEFANDKASPHTRAMLSRNF*VMCGIS
Trigger: GCTGATGCCACACATCACTCAGAAGTTTCGAGATAA...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGAAGACAGCAAGGCTATaGTTCGCGTTCTTAGATGCC +
Preference number: 4 (lower is better)
Translates to: ALESILSLQMTKQVPTHGKTARL*FAFLDA
Trigger: GGCATCTAAGAACGCGAATCATAGCCTTGCTGTCTT...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCGTGGCTATCCTTGCCTaGTGGCTCCTTGAAGCATAT +
Preference number: 4 (lower is better)
Translates to: GPLFQGMAEGFQLLTITSVAILA*WLLEAY
Trigger: ATATGCTTCAAGGAGCCATCAGGCAAGGATAGCCAC...GCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp GTTACAGCACTTGAGAATCTCGTAACACAGAGCCGCACACATGTCCGCTCTCCCCATTTCTCACACTGTTaGTGTTTGGAGTTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: VTALENLVTQSRTHVRSPHFSHC*CLELRL
Trigger: CAACCTCAACTCCAAACATCAACAGTGTGAGAAATG...GGGAGAGCGGACATGTGTGCGGCTCTGTGTTACGAGATTCTCAAGTGCTGTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR TCA 90 bp TCCTGCATCCCCACGTCTTCCATCATGGAGGCCTCCTCGTCGATGTTTGGGGTACATAAGTTCAGATGTTaGAGCCTTGTTCCAATATGT +
Preference number: 4 (lower is better)
Translates to: SCIPTSSIMEASSSMFGVHKFRC*SLVPIC
Trigger: ACATATTGGAACAAGGCTTCAACATCTGAACTTATG...TACCCCAAACATCGACGAGGAGGCCTCCATGATGGAAGACGTGGGGATGCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR TCA 90 bp CTTCAAGTAATGACTGGTGCAGAACATCTGCGTCCGAGTGGCCATAGCTGTGGTTGGAGTTACAGCACTTaGGAATCTCGTAACACAGAG +
Preference number: 4 (lower is better)
Translates to: LQVMTGAEHLRPSGHSCGWSYST*ESRNTE
Trigger: CTCTGTGTTACGAGATTCTCAAGTGCTGTAACTCCA...ACCACAGCTATGGCCACTCGGACGCAGATGTTCTGCACCAGTCATTACTTGAAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR TCA 90 bp GCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATCACACGACCTGGAGTTACAGCACTTaGGAATCTCGTAACACAGAG +
Preference number: 4 (lower is better)
Translates to: ANDKASPHTRAMRCNHTTWSYST*ESRNTE
Trigger: CTCTGTGTTACGAGATTCTCAAGTGCTGTAACTCCA...GGTCGTGTGATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGCCTTTCCGTGTaGGATATTCTGCCACTAGGG +
Preference number: 4 (lower is better)
Translates to: VIGFGKHPEFANDKASPHTRLSV*DILPLG
Trigger: CCCTAGTGGCAGAATATCTCACACGGAAAGGCGTGT...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400228.6
ENST00000448493.7
ENST00000630992.2
CDS-3UTR TCA 90 bp GGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCGCCTGCATTCTCGGCTaGAAACGCAAGTCAGAAAGT +
Preference number: 4 (lower is better)
Translates to: GPLFQGMAEGFQLLTITSACILG*KRKSES
Trigger: ACTTTCTGACTTGCGTTTTCAGCCGAGAATGCAGGC...GCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTAGTTTAAGGAGTCTCTaGGAAATTTCCGACAGCGGT +
Preference number: 4 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFSLRSL*EISDSG
Trigger: ACCGCTGTCGGAAATTTCTCAGAGACTCCTTAAACT...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACTGTGGTGCTGGTACATaGCAGGGATGCGCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: VIGFGKHPEFANDKASPHCGAGT*QGCASS
Trigger: TGAAGAAGCGCATCCCTGTCATGTACCAGCACCACA...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAAGGGCCAGCATTGACCTaGACACTCACGCTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SSSRVSTTPLLRHNENFEGPALT*TLTLPW
Trigger: CCAGGGCAGCGTGAGTGTTCAGGTCAATGCTGGCCC...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTGCTTTCATTTCTTCCTaGTACTCGAGCTGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFAFISS*YSSWSS
Trigger: AGAAGACCAGCTCGAGTATCAGGAAGAAATGAAAGC...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGATGGCGTTGAAGATGTaGAGGGAATTCGGTAAGACG +
Preference number: 4 (lower is better)
Translates to: GFGKHPEFANDKASPHTRMALKM*REFGKT
Trigger: CGTCTTACCGAATTCCCTTCACATCTTCAACGCCAT...CCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTAGATCTGCTCATGCATaGTTTCAGAAAGCTCCTTCG +
Preference number: 4 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFRSAHA*FQKAPS
Trigger: CGAAGGAGCTTTCTGAAATCATGCATGAGCAGATCT...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400228.6
ENST00000448493.7
ENST00000630992.2
CDS-3UTR TCA 90 bp ATGACTGGTGCAGAACATCTGCGTCCGAGTGGCCATAGCCATTGTCTACAGAAACCTACCACACAAGTGTaGCACGTTCACCAACTATTG +
Preference number: 4 (lower is better)
Translates to: MTGAEHLRPSGHSHCLQKPTTQV*HVHQLL
Trigger: CAATAGTTGGTGAACGTGTCACACTTGTGTGGTAGG...TTTCTGTAGACAATGGCTATGGCCACTCGGACGCAGATGTTCTGCACCAGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp ACAGAGCCGCACACATGTCCGCTCTCCCTTCATAGAATGTTGAGGGAAACTTATATGTTTCCACTCATCTaGCTCCTCTCTGCCAACCAC +
Preference number: 4 (lower is better)
Translates to: TEPHTCPLSLHRMLRETYMFPLI*LLSANH
Trigger: GTGGTTGGCAGAGAGGAGTCAGATGAGTGGAAACAT...ATAAGTTTCCCTCAACATTCTATGAAGGGAGAGCGGACATGTGTGCGGCTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp GAGAGATCGCCATTTTTGACATGGATCCTGGCCATGCTGTCGAGCCACGTCTTCATAAGCCTGTCGAGGTaGATTCCTATGAAAAGTGGA +
Preference number: 4 (lower is better)
Translates to: ERSPFLTWILAMLSSHVFISLSR*IPMKSG
Trigger: TCCACTTTTCATAGGAATTCACCTCGACAGGCTTAT...GAAGACGTGGCTCGACAGCATGGCCAGGATCCATGTCAAAAATGGCGATCTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp CAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATATGGAAAAAGAAACCCTaGGCCTCAGGACGCTTGCCT +
Preference number: 4 (lower is better)
Translates to: QGMAEGFQLLTITSRKRIWKKKP*ASGRLP
Trigger: AGGCAAGCGTCCTGAGGCTCAGGGTTTCTTTTTCCA...TATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR GCA 90 bp TGGGAGGCCTCCGTCCTGATGGAGCTCAGCTTGGAGTTACAGCACTTGAGAATCTCTCTCCTTGCTGTTTaGACATATAAGCACAGTTTC +
Preference number: 4 (lower is better)
Translates to: WEASVLMELSLELQHLRISLLAV*TYKHSF
Trigger: GAAACTGTGCTTATATGTGCAAACAGCAAGGAGAGA...GATTCTCAAGTGCTGTAACTCCAAGCTGAGCTCCATCAGGACGGAGGCCTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR GCA 90 bp GGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCTTGTACAGCCAGCCATaGTTGGTGATCCCACCCTTC +
Preference number: 4 (lower is better)
Translates to: GMAEGFQLLTITSRKRILLYSQP*LVIPPF
Trigger: GAAGGGTGGGATCACCAAGCATGGCTGGCTGTACAA...GAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp AGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGCCATTTCGCTTTTCTTaGATTGCAGCTTCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: RSHRHPGPLFQGMAEGFQPFRFS*IAASKL
Trigger: CAACTTTGAAGCTGCAATGCAAGAAAAGCGAAATGG...CTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp TTAGGACAGTCTGCAGAATGGACAGGAGGCTCACCTGCCCGAAGAAGGCTACCCCAGAACCTTCCAATTTaGTTTGTTCATCATCTTCGT +
Preference number: 4 (lower is better)
Translates to: LGQSAEWTGGSPARRRLPQNLPI*FVHHLR
Trigger: ACGAAGATGATGAACAAAGCAAATTGGAAGGTTCTG...GGGTAGCCTTCTTCGGGCAGGTGAGCCTCCTGTCCATTCTGCAGACTGTCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR GCA 90 bp CACACACGGGCCATGAGATGTAATCACACGACCGAAGACGAGCTGGTCATCCCGCAGAACCTTCCAATTTaGTTTGTTCATCATCTTCGT +
Preference number: 4 (lower is better)
Translates to: HTRAMRCNHTTEDELVIPQNLPI*FVHHLR
Trigger: ACGAAGATGATGAACAAAGCAAATTGGAAGGTTCTG...CGGGATGACCAGCTCGTCTTCGGTCGTGTGATTACATCTCATGGCCCGTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp CCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAAATGGGCTCTGCCCACTaGCATTCATCAGCGCCGGGG +
Preference number: 4 (lower is better)
Translates to: PGSLVQKLQWSVPLGHQKMGSAH*HSSAPG
Trigger: CCCCGGCGCTGATGAATGGCAGTGGGCAGAGCCCAT...TTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp ATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACAAGGACAGATGGGCTCTaGCCACTGCCATTCATCAGC +
Preference number: 4 (lower is better)
Translates to: IGFGKHPEFANDKASPHTRTDGL*PLPFIS
Trigger: GCTGATGAATGGCAGTGGGCAGAGCCCATCTGTCCT...TGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTACTGAAAATATTCCCTaGTTCGGATACTGCATGGCG +
Preference number: 4 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFTENIP*FGYCMA
Trigger: CGCCATGCAGTATCCGAAGCAGGGAATATTTTCAGT...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGACTGAAAATATTCCCTaGTTCGGATACTGCATGGCG +
Preference number: 4 (lower is better)
Translates to: GKHPEFANDKASPHTRAMTENIP*FGYCMA
Trigger: CGCCATGCAGTATCCGAAGCAGGGAATATTTTCAGT...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGTCTTTGGCATGCCTaGTTGGCATTCTTCAGCACC +
Preference number: 4 (lower is better)
Translates to: GPLFQGMAEGFQLLTITSSLWHA*LAFFST
Trigger: GGTGCTGAAGAATGCCAAGCAGGCATGCCAAAGACT...GCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp CCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATAGTCTTTGGCATGCCTaGTTGGCATTCTTCAGCACC +
Preference number: 4 (lower is better)
Translates to: PEFANDKASPHTRAMRCNSLWHA*LAFFST
Trigger: GGTGCTGAAGAATGCCAAGCAGGCATGCCAAAGACT...ATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAGCCGAGACCGGGATGTaGTGCTCGCTTGTCACCACC +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNEAETGM*CSLVTT
Trigger: GGTGGTGACAAGCGAGCAGCACATCCCGGTCTCGGC...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATCACACGACCTACAACGGTTTCCACTaGATGATGATAGGATGCAGG +
Preference number: 4 (lower is better)
Translates to: ANDKASPHTRAMRCNHTTYNGFH*MMIGCR
Trigger: CCTGCATCCTATCATCATGCAGTGGAAACCGTTGTA...GGTCGTGTGATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTATAATGTTCATGGTTaGACACTACACGGAGAAATT +
Preference number: 4 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTYNVHG*TLHGEI
Trigger: AATTTCTCCGTGTAGTGTGCAACCATGAACATTATA...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TGGGAGGCCTCCGTCCTGATGGAGCTCAGCTTGGAGTTACAGCACTTGAGAATCGCTTATCCAGGGAATTaGTCTTCTCACTATTCCTTT +
Preference number: 4 (lower is better)
Translates to: WEASVLMELSLELQHLRIAYPGN*SSHYSF
Trigger: AAAGGAATAGTGAGAAGAGCAATTCCCTGGATAAGC...GATTCTCAAGTGCTGTAACTCCAAGCTGAGCTCCATCAGGACGGAGGCCTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACAGGCTGCCCAGCTGCTaGAATCTGGCATGCATCATT +
Preference number: 4 (lower is better)
Translates to: VIGFGKHPEFANDKASPHRLPSC*NLACII
Trigger: AATGATGCATGCCAGATTGCAGCAGCTGGGCAGCCT...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000652315.1
CDS-3UTR GCA 90 bp ATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACTGGTGCAGAACATCTaGGTCCGAGTGGCCATAGCT +
Preference number: 4 (lower is better)
Translates to: IGFGKHPEFANDKASPHTLVQNI*VRVAIA
Trigger: AGCTATGGCCACTCGGACGCAGATGTTCTGCACCAG...TGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000652315.1
CDS-3UTR GCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCTCAAGTAATGACTGGTaGAGAACATCTGCGTCCGAG +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRASSNDW*RTSASE
Trigger: CTCGGACGCAGATGTTCTGCACCAGTCATTACTTGA...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp AGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGACAGATATGATGACTTaGAAATGTGTCCGGACAAAG +
Preference number: 4 (lower is better)
Translates to: RSHRHPGPLFQGMAEGFQTDMMT*KCVRTK
Trigger: CTTTGTCCGGACACATTTGCAAGTCATCATATCTGT...CTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR GCA 90 bp CATGAGAGGATTATGTCCATGGTCGGCCAGGAGCTGGTTCTTAAACGCCAATGTATCTGGTTCCCCCAATaGCAACAACGTCTGCTATCA +
Preference number: 4 (lower is better)
Translates to: HERIMSMVGQELVLKRQCIWFPQ*QQRLLS
Trigger: TGATAGCAGACGTTGTTGGCATTGGGGGAACCAGAT...ACATTGGCGTTTAAGAACCAGCTCCTGGCCGACCATGGACATAATCCTCTCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp TTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAACACTTCGCCCTGAGCTaGATCCTTGTATTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: LFQGMAEGFQLLTITSRKHFALS*ILVLQG
Trigger: CCCCTGCAATACAAGGATGCAGCTCAGGGCGAAGTG...TTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp ACTAAATCTCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTGGATGGTGCGCCGTTTaGACTGCTCTTCCACCCCGC +
Preference number: 4 (lower is better)
Translates to: TKSPGSLVQKLQWSVPLGGWCAV*TALPPR
Trigger: GCGGGGTGGAAGAGCAGTGCAAACGGCGCACCATCC...ACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGAGATTTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAGGATGGTGCGCCGTTTaGACTGCTCTTCCACCCCGC +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNEGWCAV*TALPPR
Trigger: GCGGGGTGGAAGAGCAGTGCAAACGGCGCACCATCC...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp CCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATTTCAGGTCAGTGTGGTaGTGGTACATGACAGGGATG +
Preference number: 4 (lower is better)
Translates to: PEFANDKASPHTRAMRCNFRSVW*WYMTGM
Trigger: CATCCCTGTCATGTACCAGCACCACACTGACCTGAA...ATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp CTGAGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAAGCTTCCACAAATTaGCTGAAAACTTCCTTAAGC +
Preference number: 4 (lower is better)
Translates to: LRSHRHPGPLFQGMAEGFQASTN*LKTSLS
Trigger: GCTTAAGGAAGTTTTCAGGCAATTTGTGGAAGCTTG...AAACCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR GCA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACAGGCATCAATGTCAGTaGAGCCCTCCCTGCCATGTA +
Preference number: 4 (lower is better)
Translates to: VIGFGKHPEFANDKASPHRHQCQ*SPPCHV
Trigger: TACATGGCAGGGAGGGCTGCACTGACATTGATGCCT...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp AAGAATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACATGGAGCGTTACCAATaGCGGAGATGGCGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: KNTQESNLDFKVLPHKCDMERYQ*RRWRPA
Trigger: TGCTGGGCGCCATCTCCGGCATTGGTAACGCTCCAT...GTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCAAACAGGAGGGGTGGTaGAAACACAAGATGACACAC +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRAKQEGW*KHKMTH
Trigger: GTGTGTCATCTTGTGTTTGCACCACCCCTCCTGTTT...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448493.7
CDS-3UTR GCA 90 bp ACAGAGCCGCACACATGTCCGCTCTCCCTTCATAGAATGTTGAGGGAAACTTATCAGCTGCAATGTCAGTaGGGAGCAATTGGAGGCTAT +
Preference number: 4 (lower is better)
Translates to: TEPHTCPLSLHRMLRETYQLQCQ*GAIGGY
Trigger: ATAGCCTCCAATTGCTCCGCACTGACATTGCAGCTG...ATAAGTTTCCCTCAACATTCTATGAAGGGAGAGCGGACATGTGTGCGGCTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR GCA 90 bp ACAGGCTGGTTGTTTTCAGATCTCAGTAGGCAAATGAGCTGCCATGGACTGGGAAGTAGGCAAATGAGCTaGCATGGACTGGGATACTTC +
Preference number: 4 (lower is better)
Translates to: TGWLFSDLSRQMSCHGLGSRQMS*HGLGYF
Trigger: GAAGTATCCCAGTCCATGGCAGCTCATTTGCCTACT...TCCCAGTCCATGGCAGCTCATTTGCCTACTGAGATCTGAAAACAACCAGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp AGCGCTCGGCTTTCCAGAGTCCATCTGCGCACTGCTCAAGGAGCTCCATCAGCATTCATAGACATGAACTaGAAGTTTATCCAACTTGAC +
Preference number: 4 (lower is better)
Translates to: SARLSRVHLRTAQGAPSAFIDMN*KFIQLD
Trigger: GTCAAGTTGGATAAACTTCCAGTTCATGTCTATGAA...TGCTGATGGAGCTCCTTGAGCAGTGCGCAGATGGACTCTGGAAAGCCGAGCGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp GGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCCTTCTCTTGCACTCTTaGCAAGTTCCGGCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: GMAEGFQLLTITSRKRILLLLHS*QVPAGS
Trigger: GCTACCTGCCGGAACTTGCCAAGAGTGCAAGAGAAG...GAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp TTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGACTTCTCTTGCACTCTTaGCAAGTTCCGGCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: FQGMAEGFQLLTITSRKRLLLHS*QVPAGS
Trigger: GCTACCTGCCGGAACTTGCCAAGAGTGCAAGAGAAG...TCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp TGTTGGCTTCAAGTAATGACTGGTGCAGAACATCTGCGTCCGAGTGGCCATAGCTGGTTCAGGTCTACGTaGAAATCGGCAGAAATCTTC +
Preference number: 4 (lower is better)
Translates to: CWLQVMTGAEHLRPSGHSWFRST*KSAEIF
Trigger: GAAGATTTCTGCCGATTTCCACGTAGACCTGAACCA...GCTATGGCCACTCGGACGCAGATGTTCTGCACCAGTCATTACTTGAAGCCAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp GCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATCACACGACCTGCCTCACTGAGAAATaGTTCAGGTCTACGTGGAAA +
Preference number: 4 (lower is better)
Translates to: ANDKASPHTRAMRCNHTTCLTEK*FRSTWK
Trigger: TTTCCACGTAGACCTGAACCATTTCTCAGTGAGGCA...GGTCGTGTGATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp CCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAATCAGCGCCGGGGACGTaGTGGCGAGCATTTGCCTCA +
Preference number: 4 (lower is better)
Translates to: PGSLVQKLQWSVPLGHQKSAPGT*WRAFAS
Trigger: TGAGGCAAATGCTCGCCACCACGTCCCCGGCGCTGA...TTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp CATGAGAGGATTATGTCCATGGTCGGCCAGGAGCTGGTTCTTAAACGCCAATGTTACTGTCCTAGTCTTTaGCATGCCTGCTTGGCATTC +
Preference number: 4 (lower is better)
Translates to: HERIMSMVGQELVLKRQCYCPSL*HACLAF
Trigger: GAATGCCAAGCAGGCATGCCAAAGACTAGGACAGTA...ACATTGGCGTTTAAGAACCAGCTCCTGGCCGACCATGGACATAATCCTCTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp GGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGTACTGTCCTAGTCTTTaGCATGCCTGCTTGGCATTC +
Preference number: 4 (lower is better)
Translates to: GFGKHPEFANDKASPHTRYCPSL*HACLAF
Trigger: GAATGCCAAGCAGGCATGCCAAAGACTAGGACAGTA...CCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TGGGAGGCCTCCGTCCTGATGGAGCTCAGCTTGGAGTTACAGCACTTGAGAATCTGTCTTGCCTGTAGATaGCAGAAAATCTGGCATTTT +
Preference number: 4 (lower is better)
Translates to: WEASVLMELSLELQHLRICLACR*QKIWHF
Trigger: AAAATGCCAGATTTTCTGCCATCTACAGGCAAGACA...GATTCTCAAGTGCTGTAACTCCAAGCTGAGCTCCATCAGGACGGAGGCCTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp GCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATCACACGACCAGGCTGAGTGTGTTTTaGTATGCAGGGCACAAATTC +
Preference number: 4 (lower is better)
Translates to: ANDKASPHTRAMRCNHTTRLSVF*YAGHKF
Trigger: GAATTTGTGCCCTGCATACCAAAACACACTCAGCCT...GGTCGTGTGATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGTCGTTTCCTAAGGCTTaGGCTCCAGATTCGGTTTTC +
Preference number: 4 (lower is better)
Translates to: ALESILSLQMTKQVPTHGSFPKA*APDSVF
Trigger: GAAAACCGAATCTGGAGCCCAAGCCTTAGGAAACGA...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp CCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATAGGACTCGGAACAGCTaGTTTAGGATAGTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: PEFANDKASPHTRAMRCNRTRNS*FRIVGK
Trigger: CTTGCCCACTATCCTAAACCAGCTGTTCCGAGTCCT...ATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTTTCAGAGGCAACATATaGCTCAGCCTTATACGCGTA +
Preference number: 4 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFFRGNI*LSLIRV
Trigger: TACGCGTATAAGGCTGAGCCATATGTTGCCTCTGAA...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
49% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GTTCCCTTAGGACTGCTGAACAATAAACACCCAGCAGCCACCCCAAATGGTCAGTCGTGGTCATGGATTTaGTCAGTTCTTCATGCACTG +
Preference number: 4 (lower is better)
Translates to: VPLGLLNNKHPAATPNGQSWSWI*SVLHAL
Trigger: CAGTGCATGAAGAACTGACCAAATCCATGACCACGA...CTGACCATTTGGGGTGGCTGCTGGGTGTTTATTGTTCAGCAGTCCTAAGGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448493.7
CDS-3UTR CCA 90 bp CTGGAATCTGGTTCCCCCAATGCCAACAACGTCTGCTATCAGCTGGCTGACAGAGATGCAGGAAATCTCTaGTTTCGCAGCAACTTAACT +
Preference number: 4 (lower is better)
Translates to: LESGSPNANNVCYQLADRDAGNL*FRSNLT
Trigger: AGTTAAGTTGCTGCGAAACCAGAGATTTCCTGCATC...TCTGTCAGCCAGCTGATAGCAGACGTTGTTGGCATTGGGGGAACCAGATTCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGTTCAAAGAGGGTCTTTaGGTCTCCAGGAGCAAAACA +
Preference number: 4 (lower is better)
Translates to: GKHPEFANDKASPHTRAMFKEGL*VSRSKT
Trigger: TGTTTTGCTCCTGGAGACCCAAAGACCCTCTTTGAA...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTTTCAAAGAGGGTCTTTaGGTCTCCAGGAGCAAAACA +
Preference number: 4 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFFKEGL*VSRSKT
Trigger: TGTTTTGCTCCTGGAGACCCAAAGACCCTCTTTGAA...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
49% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TGGGAGGCCTCCGTCCTGATGGAGCTCAGCTTGGAGTTACAGCACTTGAGAATCAATGTGCTACTTTGTTaGTGCTTATCCAGGGAATTG +
Preference number: 4 (lower is better)
Translates to: WEASVLMELSLELQHLRINVLLC*CLSREL
Trigger: CAATTCCCTGGATAAGCACCAACAAAGTAGCACATT...GATTCTCAAGTGCTGTAACTCCAAGCTGAGCTCCATCAGGACGGAGGCCTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp CCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATCCCATGTACTGGAACTaGTGCAGGCAGACTTCAGAT +
Preference number: 4 (lower is better)
Translates to: PEFANDKASPHTRAMRCNPMYWN*CRQTSD
Trigger: ATCTGAAGTCTGCCTGCACCAGTTCCAGTACATGGG...ATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTCCGTGCGTATCCTTTTaGTTAAGTCCTTCACATCAG +
Preference number: 4 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFPCVSF*LSPSHQ
Trigger: CTGATGTGAAGGACTTAACCAAAAGGATACGCACGG...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp ATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACCACGTCTTCCATCATaGAGGCCTCCTCGTCGATGT +
Preference number: 4 (lower is better)
Translates to: IGFGKHPEFANDKASPHTPRLPS*RPPRRC
Trigger: ACATCGACGAGGAGGCCTCCATGATGGAAGACGTGG...TGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp CCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATACATCCTCGTTGAAATaGACATCCTGCATCCCCACG +
Preference number: 4 (lower is better)
Translates to: PEFANDKASPHTRAMRCNTSSLK*TSCIPT
Trigger: CGTGGGGATGCAGGATGTCCATTTCAACGAGGATGT...ATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp ACAGAGCCGCACACATGTCCGCTCTCCCTTCATAGAATGTTGAGGGAAACTTATAGCGTGTCATACAGATaGGCCAGCCTCTCAAAATCC +
Preference number: 4 (lower is better)
Translates to: TEPHTCPLSLHRMLRETYSVSYR*ASLSKS
Trigger: GGATTTTGAGAGGCTGGCCCATCTGTATGACACGCT...ATAAGTTTCCCTCAACATTCTATGAAGGGAGAGCGGACATGTGTGCGGCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAACAGCTGCGAGTCCCTaGCCGTGCAAGGCACAGGCA +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNETAASP*PCKAQA
Trigger: TGCCTGTGCCTTGCACGGCCAGGGACTCGCAGCTGT...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
CDS-3UTR CCA 90 bp ACTAAATCTCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTACAGCTGCGAGTCCCTaGCCGTGCAAGGCACAGGCA +
Preference number: 4 (lower is better)
Translates to: TKSPGSLVQKLQWSVPLGTAASP*PCKAQA
Trigger: TGCCTGTGCCTTGCACGGCCAGGGACTCGCAGCTGT...ACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGAGATTTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
CDS-3UTR CCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCGCATCATTCCTGTTCTaGCTATGTATCGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRAASFLF*LCIASP
Trigger: TGGGGAAGCGATACATAGCCAGAACAGGAATGATGC...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000652315.1
CDS-3UTR CCA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGAAGCGGCGGATGTTGTaGGATCTCTCAAACTCTGTT +
Preference number: 4 (lower is better)
Translates to: ALESILSLQMTKQVPTHGKRRML*DLSNSV
Trigger: AACAGAGTTTGAGAGATCCCACAACATCCGCCGCTT...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAAGGGAAGCAGTGTATaGCTGTCAGGATGGTGCGCC +
Preference number: 4 (lower is better)
Translates to: LFQGMAEGFQLLTITSRKKGSSV*LSGWCA
Trigger: GGCGCACCATCCTGACAGCCATACACTGCTTCCCTT...TTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp GGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGAACCATTGTGCTTGTTaGAGTCCCACTGATGGCGTT +
Preference number: 4 (lower is better)
Translates to: GFGKHPEFANDKASPHTRNHCAC*SPTDGV
Trigger: AACGCCATCAGTGGGACTCCAACAAGCACAATGGTT...CCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp ACTAAATCTCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCTCTCCCCTTCCCCTTaGTCCTCCCTGTGCTCGGTC +
Preference number: 4 (lower is better)
Translates to: TKSPGSLVQKLQWSVPLGLSPSP*SSLCSV
Trigger: GACCGAGCACAGGGAGGACCAAGGGGAAGGGGAGAG...ACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGAGATTTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAGCACAGGCATGCCAGTaGTCCAAGGAAGGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: FQGMAEGFQLLTITSRKRAQACQ*SKEGKE
Trigger: TTCCTTTCCTTCCTTGGACCACTGGCATGCCTGTGC...TCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
3UTR CAA 72 bp AGTACTTTTCACAGCTGCAATGTCAGTGCGGAGCAATaGGAGGCTATGATGCTAAAGATCCCCAGTGGCCTA +
Preference number: 4 (lower is better)
Translates to: STFHSCNVSAEQ*EAMMLKIPSGL
Trigger: TAGGCCACTGGGGATCTTTAGCATCATAGCCTCCAATTGCTCCGCACTGACATTGCAGCTGTGAAAAGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp GTCGTTCAGGATCTGAGTCTTCTTCTGGACGATGACATTTTCATAGTCGAGTGGCAGTCGTTCAGGATCTaGGTCTTCTTCTGGACGATG +
Preference number: 4 (lower is better)
Translates to: VVQDLSLLLDDDIFIVEWQSFRI*VFFWTM
Trigger: CATCGTCCAGAAGAAGACTCAGATCCTGAACGACTG...CCACTCGACTATGAAAATGTCATCGTCCAGAAGAAGACTCAGATCCTGAACGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479769.1
CDS-3UTR TCA 90 bp GCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATCACACGACCGAAGTTTATCCAACTTaGCCACTTTGTTCGGAAGCT +
Preference number: 4 (lower is better)
Translates to: ANDKASPHTRAMRCNHTTEVYPT*PLCSEA
Trigger: AGCTTCCGAACAAAGTGGTCAAGTTGGATAAACTTC...GGTCGTGTGATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAGCCAGCCATGCTTGGTaGTCCCACCCTTCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKASHAW*SHPSGN
Trigger: GTTCCCAGAAGGGTGGGATCACCAAGCATGGCTGGC...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCGATCCATCGCCAAGTTaGATCAGGTGGAAAAATCGT +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRADPSPS*IRWKNR
Trigger: ACGATTTTTCCACCTGATTCAACTTGGCGATGGATC...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCTGTTCATCATCTTCGTaGGAGTCGCCATTTCGCTTT +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRACSSSS*ESPFRF
Trigger: AAAGCGAAATGGCGACTCTCACGAAGATGATGAACA...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATCACACGACCAAACTTCTCTTCAAATaGCTTCACTTCTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: ANDKASPHTRAMRCNHTTKLLFK*LHFWLS
Trigger: GCTGAGCCAGAAGTGAAGTCATTTGAAGAGAAGTTT...GGTCGTGTGATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGTGTGTGATGCTCCCCTaGAGGACTTTTTCAATTCTG +
Preference number: 4 (lower is better)
Translates to: ALESILSLQMTKQVPTHGCVMLP*RTFSIL
Trigger: CAGAATTGAAAAAGTCCTTCAGGGGAGCATCACACA...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGACCTCCACTTCAAACGTaGTGGGAGTTTTACTGCAGG +
Preference number: 4 (lower is better)
Translates to: FQGMAEGFQLLTITSRKRPPLQT*WEFYCR
Trigger: CCTGCAGTAAAACTCCCATCACGTTTGAAGTGGAGG...TCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp GACAGATATGATGACTTGCAAATGTGTCCGGACAAAGGACTTCTTTCCAGTGTACAAAGGCGCTTCTTGTaGAAACTGGCCCACCAGGTC +
Preference number: 4 (lower is better)
Translates to: DRYDDLQMCPDKGLLSSVQRRFL*KLAHQV
Trigger: GACCTGGTGGGCCAGTTTTCACAAGAAGCGCCTTTG...TACACTGGAAAGAAGTCCTTTGTCCGGACACATTTGCAAGTCATCATATCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR TCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTTGCTTTTCATGCAGCTaGGTGGGCAACTCTATTTTA +
Preference number: 4 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFCFSCS*VGNSIL
Trigger: TAAAATAGAGTTGCCCACTCAGCTGCATGAAAAGCA...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TGTTGGCTTCAAGTAATGACTGGTGCAGAACATCTGCGTCCGAGTGGCCATAGCTGCTTTTCATGCAGCTaGGTGGGCAACTCTATTTTA +
Preference number: 4 (lower is better)
Translates to: CWLQVMTGAEHLRPSGHSCFSCS*VGNSIL
Trigger: TAAAATAGAGTTGCCCACTCAGCTGCATGAAAAGCA...GCTATGGCCACTCGGACGCAGATGTTCTGCACCAGTCATTACTTGAAGCCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR TCA 90 bp ATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACACTGGGCAACCACATaGATAATGACCCGAGTCACG +
Preference number: 4 (lower is better)
Translates to: IGFGKHPEFANDKASPHTHWATT*IMTRVT
Trigger: CGTGACTCGGGTCATTATTCATGTGGTTGCCCAGTG...TGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAACACTGGGCAACCACATaGATAATGACCCGAGTCACG +
Preference number: 4 (lower is better)
Translates to: LFQGMAEGFQLLTITSRKHWATT*IMTRVT
Trigger: CGTGACTCGGGTCATTATTCATGTGGTTGCCCAGTG...TTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp CATGAGAGGATTATGTCCATGGTCGGCCAGGAGCTGGTTCTTAAACGCCAATGTCTCGAAACTTCTGAGTaGTGTGTGGCATCAGCATAT +
Preference number: 4 (lower is better)
Translates to: HERIMSMVGQELVLKRQCLETSE*CVASAY
Trigger: ATATGCTGATGCCACACATCACTCAGAAGTTTCGAG...ACATTGGCGTTTAAGAACCAGCTCCTGGCCGACCATGGACATAATCCTCTCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR TCA 90 bp GCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATCACACGACCGTTGATGTTTGGAGTTaGGGTTGTATATGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: ANDKASPHTRAMRCNHTTVDVWS*GCIWRS
Trigger: GCTTCTCCATATACAACCTCAACTCCAAACATCAAC...GGTCGTGTGATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTGTTGATGTTTGGAGTTaGGGTTGTATATGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFVDVWS*GCIWRS
Trigger: GCTTCTCCATATACAACCTCAACTCCAAACATCAAC...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGTGGAGTTACAGCACTTaGGAATCTCGTAACACAGAG +
Preference number: 4 (lower is better)
Translates to: GFGKHPEFANDKASPHTRWSYST*ESRNTE
Trigger: CTCTGTGTTACGAGATTCTCAAGTGCTGTAACTCCA...CCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCTGGAGTTACAGCACTTaGGAATCTCGTAACACAGAG +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRAWSYST*ESRNTE
Trigger: CTCTGTGTTACGAGATTCTCAAGTGCTGTAACTCCA...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp ACTAAATCTCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTTGCGGCCCGAGTGCATaGCCTCGGTCACTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: TKSPGSLVQKLQWSVPLGCGPSA*PRSLCC
Trigger: ACAGCAAAGTGACCGAGGTCATGCACTCGGGCCGCA...ACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGAGATTTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAATGCGGCCCGAGTGCATaGCCTCGGTCACTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: SSSRVSTTPLLRHNENFECGPSA*PRSLCC
Trigger: ACAGCAAAGTGACCGAGGTCATGCACTCGGGCCGCA...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TTGATATCTTTCTCACACTGGCTATGTATCGCTTCCCCATGTACTGGAACTGGTACACGCCTTTCCGTGTaGGATATTCTGCCACTAGGG +
Preference number: 4 (lower is better)
Translates to: LISFSHWLCIASPCTGTGTRLSV*DILPLG
Trigger: CCCTAGTGGCAGAATATCTCACACGGAAAGGCGTGT...ACCAGTTCCAGTACATGGGGAAGCGATACATAGCCAGTGTGAGAAAGATATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp AAGAATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACGCTTCCACTTCGCCCTaGGCTGCATCCTTGTATTGC +
Preference number: 4 (lower is better)
Translates to: KNTQESNLDFKVLPHKCDASTSP*AASLYC
Trigger: GCAATACAAGGATGCAGCTCAGGGCGAAGTGGAAGC...GTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGAGTTTAAGGAGTCTCTaGGAAATTTCCGACAGCGGT +
Preference number: 4 (lower is better)
Translates to: ALESILSLQMTKQVPTHGSLRSL*EISDSG
Trigger: ACCGCTGTCGGAAATTTCTCAGAGACTCCTTAAACT...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp ATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACATGTGGTGCTGGTACATaGCAGGGATGCGCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: IGFGKHPEFANDKASPHTCGAGT*QGCASS
Trigger: TGAAGAAGCGCATCCCTGTCATGTACCAGCACCACA...TGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAAGGGCCAGCATTGACCTaGACACTCACGCTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKGPALT*TLTLPW
Trigger: CCAGGGCAGCGTGAGTGTTCAGGTCAATGCTGGCCC...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCTTTCATTTCTTCCTaGTACTCGAGCTGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: GFGKHPEFANDKASPHTRAFISS*YSSWSS
Trigger: AGAAGACCAGCTCGAGTATCAGGAAGAAATGAAAGC...CCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp ATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACAGAGCTGGTCATCCCGTaGACCATTGTGCTTGTTGGA +
Preference number: 4 (lower is better)
Translates to: IGFGKHPEFANDKASPHTELVIP*TIVLVG
Trigger: TCCAACAAGCACAATGGTTCACGGGATGACCAGCTC...TGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GAGAGATCGCCATTTTTGACATGGATCCTGGCCATGCTGTCGAGCCACGTCTTCCCAATCCTAACAAGGTaGATTCTGAATTGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: ERSPFLTWILAMLSSHVFPILTR*ILNWRR
Trigger: TCTTCTCCAATTCAGAATTCACCTTGTTAGGATTGG...GAAGACGTGGCTCGACAGCATGGCCAGGATCCATGTCAAAAATGGCGATCTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR GCA 90 bp GGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAACAAACAAGCTCTGTaGTTCCTCTTCCGCCTTCGC +
Preference number: 4 (lower is better)
Translates to: GMAEGFQLLTITSRKRILNKQAL*FLFRLR
Trigger: GCGAAGGCGGAAGAGGAAGCACAGAGCTTGTTTGTT...GAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp ATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACATTGTACAGCCAGCCATaGTTGGTGATCCCACCCTTC +
Preference number: 4 (lower is better)
Translates to: IGFGKHPEFANDKASPHTLYSQP*LVIPPF
Trigger: GAAGGGTGGGATCACCAAGCATGGCTGGCTGTACAA...TGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp ATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGTTGTACAGCCAGCCATaGTTGGTGATCCCACCCTTC +
Preference number: 4 (lower is better)
Translates to: MAEGFQLLTITSRKRILRLYSQP*LVIPPF
Trigger: GAAGGGTGGGATCACCAAGCATGGCTGGCTGTACAA...CCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp GCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATCACACGACCTTCCACTTCACTGTCTaGTGCCAAGAGATAACTACT +
Preference number: 4 (lower is better)
Translates to: ANDKASPHTRAMRCNHTTFHFTV*CQEITT
Trigger: AGTAGTTATCTCTTGGCAGCAGACAGTGAAGTGGAA...GGTCGTGTGATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGTTCCACTTCACTGTCTaGTGCCAAGAGATAACTACT +
Preference number: 4 (lower is better)
Translates to: GKHPEFANDKASPHTRAMFHFTV*CQEITT
Trigger: AGTAGTTATCTCTTGGCAGCAGACAGTGAAGTGGAA...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGTCGCTTTTCTTGCATTaGAGCTTCAAAGTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: GKHPEFANDKASPHTRAMSLFLH*SFKVEL
Trigger: CAGCTCAACTTTGAAGCTGCAATGCAAGAAAAGCGA...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCGATTTCTGCTTCTCTTaGACTCTTGGCAAGTTCCGG +
Preference number: 4 (lower is better)
Translates to: GPLFQGMAEGFQLLTITSDFCFS*TLGKFR
Trigger: CCGGAACTTGCCAAGAGTGCAAGAGAAGCAGAAATC...GCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp GAGAGATCGCCATTTTTGACATGGATCCTGGCCATGCTGTCGAGCCACGTCTTCTTTCAGTTTGATTTCTaGTTCTCTTGCACTCTTGGC +
Preference number: 4 (lower is better)
Translates to: ERSPFLTWILAMLSSHVFFQFDF*FSCTLG
Trigger: GCCAAGAGTGCAAGAGAAGCAGAAATCAAACTGAAA...GAAGACGTGGCTCGACAGCATGGCCAGGATCCATGTCAAAAATGGCGATCTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAAATGGGCTCTGCCCACTaGCATTCATCAGCGCCGGGG +
Preference number: 4 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKMGSAH*HSSAPG
Trigger: CCCCGGCGCTGATGAATGGCAGTGGGCAGAGCCCAT...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGAAAAGGACAGATGGGCTCTaGCCACTGCCATTCATCAGC +
Preference number: 4 (lower is better)
Translates to: AEGFQLLTITSRKRILRKRTDGL*PLPFIS
Trigger: GCTGATGAATGGCAGTGGGCAGAGCCCATCTGTCCT...TTTCCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp AACTGTATGATCCTGAGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGACTGAAAATATTCCCTaGTTCGGATACTGCATGGCG +
Preference number: 4 (lower is better)
Translates to: NCMILRSHRHPGPLFQGMTENIP*FGYCMA
Trigger: CGCCATGCAGTATCCGAAGCAGGGAATATTTTCAGT...CATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCTCAGGATCATACAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp GGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGACTGAAAATATTCCCTaGTTCGGATACTGCATGGCG +
Preference number: 4 (lower is better)
Translates to: GFGKHPEFANDKASPHTRTENIP*FGYCMA
Trigger: CGCCATGCAGTATCCGAAGCAGGGAATATTTTCAGT...CCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGCTTAAACAATGTCCTTaGTGCCCAAGCAAATGGCAT +
Preference number: 4 (lower is better)
Translates to: GKHPEFANDKASPHTRAMLKQCP*CPSKWH
Trigger: ATGCCATTTGCTTGGGCAGCAAGGACATTGTTTAAG...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp CTGGTTCCCCCAATGCCAACAACGTCTGCTATCAGCTGGCTGACAGATATGATGCATTGGATAGCTTATTaGTGTCTTGCCTGTAGATGG +
Preference number: 4 (lower is better)
Translates to: LVPPMPTTSAISWLTDMMHWIAY*CLACRW
Trigger: CCATCTACAGGCAAGACAGCAATAAGCTATCCAATG...CATCATATCTGTCAGCCAGCTGATAGCAGACGTTGTTGGCATTGGGGGAACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGGAGTGTGTTTTGGTATaGAGGGCACAAATTCCTCCA +
Preference number: 4 (lower is better)
Translates to: ALESILSLQMTKQVPTHGECVLV*RAQIPP
Trigger: TGGAGGAATTTGTGCCCTGCATACCAAAACACACTC...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTCATCCCTCTTCTTCGTaGTTCCTTTACTTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFHPSSS*FLYLSC
Trigger: ACAACTCAAGTAAAGGAAGCACGAAGAAGAGGGATG...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGTGGCCTTCCATCGCATaGAGACTCTTAAGGTACTTT +
Preference number: 4 (lower is better)
Translates to: GFGKHPEFANDKASPHTRWPSIA*RLLRYF
Trigger: AAAGTACCTTAAGAGTCTGCATGCGATGGAAGGCCA...CCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp CTGGTTCCCCCAATGCCAACAACGTCTGCTATCAGCTGGCTGACAGATATGATGTGCATGATGATAGGATaGAGGAAATCTCTGGTTTCG +
Preference number: 4 (lower is better)
Translates to: LVPPMPTTSAISWLTDMMCMMIG*RKSLVS
Trigger: CGAAACCAGAGATTTCCTGCATCCTATCATCATGCA...CATCATATCTGTCAGCCAGCTGATAGCAGACGTTGTTGGCATTGGGGGAACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp GCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATCACACGACCTGCATGATGATAGGATaGAGGAAATCTCTGGTTTCG +
Preference number: 4 (lower is better)
Translates to: ANDKASPHTRAMRCNHTTCMMIG*RKSLVS
Trigger: CGAAACCAGAGATTTCCTGCATCCTATCATCATGCA...GGTCGTGTGATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCTACAACGGTTTCCACTaGATGATGATAGGATGCAGG +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRAYNGFH*MMIGCR
Trigger: CCTGCATCCTATCATCATGCAGTGGAAACCGTTGTA...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAGGGTGCTTCCCTTCTaGGGCGTCACCAGCGGATTC +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNERVLPF*GVTSGF
Trigger: GAATCCGCTGGTGACGCCGCAGAAGGGAAGCACCCT...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAAAGGGTGCTTCCCTTCTaGGGCGTCACCAGCGGATTC +
Preference number: 4 (lower is better)
Translates to: SSSRVSTTPLLRHNENFERVLPF*GVTSGF
Trigger: GAATCCGCTGGTGACGCCGCAGAAGGGAAGCACCCT...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAATGCCAACAACGTCTaGTATCAGCTGGCTGACAGA +
Preference number: 4 (lower is better)
Translates to: GPLFQGMAEGFQLLTITSNANNV*YQLADR
Trigger: TCTGTCAGCCAGCTGATAGCAGACGTTGTTGGCATT...GCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR GCA 90 bp TTGATATCTTTCTCACACTGGCTATGTATCGCTTCCCCATGTACTGGAACTGGTTTTCCAGAGTCCATCTaGGCACTGCTCAAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: LISFSHWLCIASPCTGTGFPESI*ALLKEL
Trigger: GAGCTCCTTGAGCAGTGCGCAGATGGACTCTGGAAA...ACCAGTTCCAGTACATGGGGAAGCGATACATAGCCAGTGTGAGAAAGATATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR GCA 90 bp ACTAAATCTCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTAGCCTGCGGCCCGAGTaGATGACCTCGGTCACTTTG +
Preference number: 4 (lower is better)
Translates to: TKSPGSLVQKLQWSVPLGSLRPE*MTSVTL
Trigger: CAAAGTGACCGAGGTCATGCACTCGGGCCGCAGGCT...ACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGAGATTTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp ATTAGAATCTTGATTTGTGTCACGTGTTTTTCTCTCAGAGGTGGCCGCTCTTCTCACTTCGCCCTGAGCTaGATCCTTGTATTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: IRILICVTCFSLRGGRSSHFALS*ILVLQG
Trigger: CCCCTGCAATACAAGGATGCAGCTCAGGGCGAAGTG...AGAAGAGCGGCCACCTCTGAGAGAAAAACACGTGACACAAATCAAGATTCTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR GCA 90 bp GAGAGATCGCCATTTTTGACATGGATCCTGGCCATGCTGTCGAGCCACGTCTTCAATATCCTGGCCCAGTaGATAGCTTTTAAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: ERSPFLTWILAMLSSHVFNILAQ*IAFKVL
Trigger: AAGGACTTTAAAAGCTATGCACTGGGCCAGGATATT...GAAGACGTGGCTCGACAGCATGGCCAGGATCCATGTCAAAAATGGCGATCTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp GAAGTAGAGCAGCTGGGAGGCCTCCGTCCTGATGGAGCTCAGCTTGGAGTTACATTCATAGACATGAACTaGAAGTTTATCCAACTTGAC +
Preference number: 4 (lower is better)
Translates to: EVEQLGGLRPDGAQLGVTFIDMN*KFIQLD
Trigger: GTCAAGTTGGATAAACTTCCAGTTCATGTCTATGAA...TGTAACTCCAAGCTGAGCTCCATCAGGACGGAGGCCTCCCAGCTGCTCTACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGTGCCTCACTGAGAAATaGTTCAGGTCTACGTGGAAA +
Preference number: 4 (lower is better)
Translates to: ALESILSLQMTKQVPTHGCLTEK*FRSTWK
Trigger: TTTCCACGTAGACCTGAACCATTTCTCAGTGAGGCA...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp ACAGAGCCGCACACATGTCCGCTCTCCCTTCATAGAATGTTGAGGGAAACTTATTTTGGCATGCCTGCTTaGCATTCTTCAGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: TEPHTCPLSLHRMLRETYFGMPA*HSSAPS
Trigger: AGAAGGTGCTGAAGAATGCCAAGCAGGCATGCCAAA...ATAAGTTTCCCTCAACATTCTATGAAGGGAGAGCGGACATGTGTGCGGCTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp CCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATTACTGTCCTAGTCTTTaGCATGCCTGCTTGGCATTC +
Preference number: 4 (lower is better)
Translates to: PEFANDKASPHTRAMRCNYCPSL*HACLAF
Trigger: GAATGCCAAGCAGGCATGCCAAAGACTAGGACAGTA...ATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp CTCGGCTTTCCAGAGTCCATCTGCGCACTGCTCAAGGAGCTCCATCAGCACATCAGATGGCAGAAAATCTaGCATTTTTGTCAAGATTTC +
Preference number: 4 (lower is better)
Translates to: LGFPESICALLKELHQHIRWQKI*HFCQDF
Trigger: GAAATCTTGACAAAAATGCCAGATTTTCTGCCATCT...GATGTGCTGATGGAGCTCCTTGAGCAGTGCGCAGATGGACTCTGGAAAGCCGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp ACAGGCTGGTTGTTTTCAGATCTCAGTAGGCAAATGAGCTGCCATGGACTGGGAAGGCTGAGTGTGTTTTaGTATGCAGGGCACAAATTC +
Preference number: 4 (lower is better)
Translates to: TGWLFSDLSRQMSCHGLGRLSVF*YAGHKF
Trigger: GAATTTGTGCCCTGCATACCAAAACACACTCAGCCT...TCCCAGTCCATGGCAGCTCATTTGCCTACTGAGATCTGAAAACAACCAGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGAGGCTGAGTGTGTTTTaGTATGCAGGGCACAAATTC +
Preference number: 4 (lower is better)
Translates to: ALESILSLQMTKQVPTHGRLSVF*YAGHKF
Trigger: GAATTTGTGCCCTGCATACCAAAACACACTCAGCCT...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAGCTTCTTGTGAAAACTaGCCCACCAGGTCTGCCATA +
Preference number: 4 (lower is better)
Translates to: FQGMAEGFQLLTITSRKRASCEN*PTRSAI
Trigger: TATGGCAGACCTGGTGGGCCAGTTTTCACAAGAAGC...TCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000427887.2
ENST00000627024.2
CDS-3UTR CCA 90 bp CAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATAAGGACTCGGAACAGCTaGTTTAGGATAGTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: QGMAEGFQLLTITSRKRIRTRNS*FRIVGK
Trigger: CTTGCCCACTATCCTAAACCAGCTGTTCCGAGTCCT...TATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp GGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGTTCAGAGGCAACATATaGCTCAGCCTTATACGCGTA +
Preference number: 4 (lower is better)
Translates to: GFGKHPEFANDKASPHTRFRGNI*LSLIRV
Trigger: TACGCGTATAAGGCTGAGCCATATGTTGCCTCTGAA...CCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GTTCACCAACTATTGGCTCCAAGACACTTTCAGAGTGATGGTGGAGAGAAGCCCTCGTGGTCATGGATTTaGTCAGTTCTTCATGCACTG +
Preference number: 4 (lower is better)
Translates to: VHQLLAPRHFQSDGGEKPSWSWI*SVLHAL
Trigger: CAGTGCATGAAGAACTGACCAAATCCATGACCACGA...GGGCTTCTCTCCACCATCACTCTGAAAGTGTCTTGGAGCCAATAGTTGGTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGTTCAAAGAGGGTCTTTaGGTCTCCAGGAGCAAAACA +
Preference number: 4 (lower is better)
Translates to: ALESILSLQMTKQVPTHGFKEGL*VSRSKT
Trigger: TGTTTTGCTCCTGGAGACCCAAAGACCCTCTTTGAA...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GTTCACCAACTATTGGCTCCAAGACACTTTCAGAGTGATGGTGGAGAGAAGCCCTTCAAAGAGGGTCTTTaGGTCTCCAGGAGCAAAACA +
Preference number: 4 (lower is better)
Translates to: VHQLLAPRHFQSDGGEKPFKEGL*VSRSKT
Trigger: TGTTTTGCTCCTGGAGACCCAAAGACCCTCTTTGAA...GGGCTTCTCTCCACCATCACTCTGAAAGTGTCTTGGAGCCAATAGTTGGTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACTGGTCGGCCAGGAGCTaGTTCTTAAACGCCAATGTA +
Preference number: 4 (lower is better)
Translates to: VIGFGKHPEFANDKASPHWSARS*FLNANV
Trigger: TACATTGGCGTTTAAGAACCAGCTCCTGGCCGACCA...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp CAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATATGGTCGGCCAGGAGCTaGTTCTTAAACGCCAATGTA +
Preference number: 4 (lower is better)
Translates to: QGMAEGFQLLTITSRKRIWSARS*FLNANV
Trigger: TACATTGGCGTTTAAGAACCAGCTCCTGGCCGACCA...TATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCACGTCTGCTATCAGCTaGCTGACAGATATGATGACT +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRATSAIS*LTDMMT
Trigger: AGTCATCATATCTGTCAGCCAGCTGATAGCAGACGT...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCCCGTGCGTATCCTTTTaGTTAAGTCCTTCACATCAG +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRAPCVSF*LSPSHQ
Trigger: CTGATGTGAAGGACTTAACCAAAAGGATACGCACGG...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp ATGACTGGTGCAGAACATCTGCGTCCGAGTGGCCATAGCCATTGTCTACAGAAACCGTGCGTATCCTTTTaGTTAAGTCCTTCACATCAG +
Preference number: 4 (lower is better)
Translates to: MTGAEHLRPSGHSHCLQKPCVSF*LSPSHQ
Trigger: CTGATGTGAAGGACTTAACCAAAAGGATACGCACGG...TTTCTGTAGACAATGGCTATGGCCACTCGGACGCAGATGTTCTGCACCAGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAAGGGGCGGCTCCCACTaGACTGCTTCTTTCCGTGTG +
Preference number: 4 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKRGGSH*TASFRV
Trigger: CACACGGAAAGAAGCAGTCCAGTGGGAGCCGCCCCT...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000652315.1
CDS-3UTR CCA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGCTCAGGCAGGCGCTATaGCTGTGGGGGAGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLLRQAL*LWGRRG
Trigger: GCCCCTTCTCCCCCACAGCCATAGCGCCTGCCTGAG...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000652315.1
CDS-3UTR CCA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAAACAGCTGCGAGTCCCTaGCCGTGCAAGGCACAGGCA +
Preference number: 4 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKTAASP*PCKAQA
Trigger: TGCCTGTGCCTTGCACGGCCAGGGACTCGCAGCTGT...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
CDS-3UTR CCA 90 bp CCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATAACCATTGTGCTTGTTaGAGTCCCACTGATGGCGTT +
Preference number: 4 (lower is better)
Translates to: PEFANDKASPHTRAMRCNNHCAC*SPTDGV
Trigger: AACGCCATCAGTGGGACTCCAACAAGCACAATGGTT...ATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp ATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGAAGCCCACAAGAGCATaGAGCGTTACCAATGCCGGA +
Preference number: 4 (lower is better)
Translates to: MAEGFQLLTITSRKRILRKPTRA*SVTNAG
Trigger: TCCGGCATTGGTAACGCTCCATGCTCTTGTGGGCTT...CCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp ATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGGGAAGGAAAGGAAACTaGCTTCCCAGGCACAAGTGG +
Preference number: 4 (lower is better)
Translates to: MAEGFQLLTITSRKRILRGRKGN*LPRHKW
Trigger: CCACTTGTGCCTGGGAAGCCAGTTTCCTTTCCTTCC...CCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp ATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACAGCACAGGCATGCCAGTaGTCCAAGGAAGGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: IGFGKHPEFANDKASPHTAQACQ*SKEGKE
Trigger: TTCCTTTCCTTCCTTGGACCACTGGCATGCCTGTGC...TGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442173.5
ENST00000630992.2
CDS-3UTR CCA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGATATCTTTCTCACACTaGCTATGTATCGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: GKHPEFANDKASPHTRAMISFSH*LCIASP
Trigger: TGGGGAAGCGATACATAGCCAGTGTGAGAAAGATAT...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp CATGAGAGGATTATGTCCATGGTCGGCCAGGAGCTGGTTCTTAAACGCCAATGTGCAAATGAGCTGCCATaGACTGGGATACTTCTAAGT +
Preference number: 4 (lower is better)
Translates to: HERIMSMVGQELVLKRQCANELP*TGILLS
Trigger: ACTTAGAAGTATCCCAGTCCATGGCAGCTCATTTGC...ACATTGGCGTTTAAGAACCAGCTCCTGGCCGACCATGGACATAATCCTCTCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp ATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACAGTCGTTCAGGATCTaGGTCTTCTTCTGGACGATG +
Preference number: 4 (lower is better)
Translates to: IGFGKHPEFANDKASPHTQSFRI*VFFWTM
Trigger: CATCGTCCAGAAGAAGACTCAGATCCTGAACGACTG...TGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp AAGAATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACCTTCGCAGGCACTGTTaGGCATATGTATCGACCCTG +
Preference number: 4 (lower is better)
Translates to: KNTQESNLDFKVLPHKCDLRRHC*AYVSTL
Trigger: CAGGGTCGATACATATGCTCAACAGTGCCTGCGAAG...GTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp AAGAATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACACCTCATGGTCACGCTaGTGGCACTGTTCATGTTGC +
Preference number: 4 (lower is better)
Translates to: KNTQESNLDFKVLPHKCDTSWSR*WHCSCC
Trigger: GCAACATGAACAGTGCCATCAGCGTGACCATGAGGT...GTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp GGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCTGTTCATCATCTTCGTaGGAGTCGCCATTTCGCTTT +
Preference number: 4 (lower is better)
Translates to: GPLFQGMAEGFQLLTITSCSSSS*ESPFRF
Trigger: AAAGCGAAATGGCGACTCTCACGAAGATGATGAACA...GCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCAAACTTCTCTTCAAATaGCTTCACTTCTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRAKLLFK*LHFWLS
Trigger: GCTGAGCCAGAAGTGAAGTCATTTGAAGAGAAGTTT...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp ACAGAGCCGCACACATGTCCGCTCTCCCTTCATAGAATGTTGAGGGAAACTTATATGAGGACAAGTGACTaGAAATATTCCCTGCTTCGG +
Preference number: 4 (lower is better)
Translates to: TEPHTCPLSLHRMLRETYMRTSD*KYSLLR
Trigger: CCGAAGCAGGGAATATTTTCAGTCACTTGTCCTCAT...ATAAGTTTCCCTCAACATTCTATGAAGGGAGAGCGGACATGTGTGCGGCTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR TCA 90 bp CCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATTGTGTGATGCTCCCCTaGAGGACTTTTTCAATTCTG +
Preference number: 4 (lower is better)
Translates to: PEFANDKASPHTRAMRCNCVMLP*RTFSIL
Trigger: CAGAATTGAAAAAGTCCTTCAGGGGAGCATCACACA...ATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATCACACGACCAGTCTGCAAGTAACTTaGGCATGTCATCATTGGATA +
Preference number: 4 (lower is better)
Translates to: ANDKASPHTRAMRCNHTTSLQVT*ACHHWI
Trigger: TATCCAATGATGACATGCTCAAGTTACTTGCAGACT...GGTCGTGTGATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp AATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACACGCCTCCACTTCAAACGTaGTGGGAGTTTTACTGCAGG +
Preference number: 4 (lower is better)
Translates to: NTQESNLDFKVLPHKCDTPPLQT*WEFYCR
Trigger: CCTGCAGTAAAACTCCCATCACGTTTGAAGTGGAGG...CGTGTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp GGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCCGTGCTTCCTTTACTTaGGTTGTCACAGCTGACATG +
Preference number: 4 (lower is better)
Translates to: GMAEGFQLLTITSRKRILRASFT*VVTADM
Trigger: CATGTCAGCTGTGACAACTCAAGTAAAGGAAGCACG...GAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp GGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCCTCGAAACTTCTGAGTaGTGTGTGGCATCAGCATAT +
Preference number: 4 (lower is better)
Translates to: GPLFQGMAEGFQLLTITSLETSE*CVASAY
Trigger: ATATGCTGATGCCACACATCACTCAGAAGTTTCGAG...GCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp CCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATTTATCTCGAAACTTCTaGGTGATGTGTGGCATCAGC +
Preference number: 4 (lower is better)
Translates to: PEFANDKASPHTRAMRCNLSRNF*VMCGIS
Trigger: GCTGATGCCACACATCACTCAGAAGTTTCGAGATAA...ATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACAAGACAGCAAGGCTATaGTTCGCGTTCTTAGATGCC +
Preference number: 4 (lower is better)
Translates to: VIGFGKHPEFANDKASPHKTARL*FAFLDA
Trigger: GGCATCTAAGAACGCGAATCATAGCCTTGCTGTCTT...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTAGGTCTTGGTATCTTTaGATCCTGCCTTTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFRSWYL*ILPFPN
Trigger: ATTTGGAAAAGGCAGGATTCAAAGATACCAAGACCT...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCTGCCTGATGGCTCCTTaGAGCATATCTGTCATCAAA +
Preference number: 4 (lower is better)
Translates to: GPLFQGMAEGFQLLTITSCLMAP*SISVIK
Trigger: TTTGATGACAGATATGCTTCAAGGAGCCATCAGGCA...GCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp ATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGGTGGCTATCCTTGCCTaGTGGCTCCTTGAAGCATAT +
Preference number: 4 (lower is better)
Translates to: MAEGFQLLTITSRKRILRVAILA*WLLEAY
Trigger: ATATGCTTCAAGGAGCCATCAGGCAAGGATAGCCAC...CCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp GGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGCATTTCTCACACTGTTaGTGTTTGGAGTTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: GFGKHPEFANDKASPHTRHFSHC*CLELRL
Trigger: CAACCTCAACTCCAAACATCAACAGTGTGAGAAATG...CCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TGGTTCTTAAACGCCAATGTAAATAGAGAAAGCGTGTCCAGAGCTGTCAGGCAAGCACATTGCTGCCTCTaGGAGATCGCCATTTTTGAC +
Preference number: 4 (lower is better)
Translates to: WFLNANVNRESVSRAVRQAHCCL*EIAIFD
Trigger: GTCAAAAATGGCGATCTCTCAGAGGCAGCAATGTGC...TTGCCTGACAGCTCTGGACACGCTTTCTCTATTTACATTGGCGTTTAAGAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR TCA 90 bp ATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACATCAGCACATCCTCGTTaGAATGGACATCCTGCATCC +
Preference number: 4 (lower is better)
Translates to: IGFGKHPEFANDKASPHTSAHPR*NGHPAS
Trigger: GGATGCAGGATGTCCATTTCAACGAGGATGTGCTGA...TGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAATGTAGATGTCGGCGATaGGCTCGTAGCGCTCGGCTT +
Preference number: 4 (lower is better)
Translates to: SSSRVSTTPLLRHNENFECRCRR*ARSARL
Trigger: AAGCCGAGCGCTACGAGCTCATCGCCGACATCTACA...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACTTTCCGACAGCGGTGTaGGTTTGGGTTCCTTGTAAA +
Preference number: 4 (lower is better)
Translates to: VIGFGKHPEFANDKASPHFPTAV*VWVPCK
Trigger: TTTACAAGGAACCCAAACTCACACCGCTGTCGGAAA...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCGGGCCAGCATTGACCTaGACACTCACGCTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFGPALT*TLTLPW
Trigger: CCAGGGCAGCGTGAGTGTTCAGGTCAATGCTGGCCC...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACATGGCGTTGAAGATGTaGAGGGAATTCGGTAAGACG +
Preference number: 4 (lower is better)
Translates to: VIGFGKHPEFANDKASPHMALKM*REFGKT
Trigger: CGTCTTACCGAATTCCCTTCACATCTTCAACGCCAT...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGATCTGCTCATGCATaGTTTCAGAAAGCTCCTTCG +
Preference number: 4 (lower is better)
Translates to: GPLFQGMAEGFQLLTITSRSAHA*FQKAPS
Trigger: CGAAGGAGCTTTCTGAAATCATGCATGAGCAGATCT...GCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp ATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGAAGACACTTTCAGAGTaGTGGTGGAGAGAAGCCCAC +
Preference number: 4 (lower is better)
Translates to: MAEGFQLLTITSRKRILRKTLSE*WWREAH
Trigger: GTGGGCTTCTCTCCACCATCACTCTGAAAGTGTCTT...CCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp GGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCCCTACCACACAAGTGTaGCACGTTCACCAACTATTG +
Preference number: 4 (lower is better)
Translates to: GMAEGFQLLTITSRKRILPTTQV*HVHQLL
Trigger: CAATAGTTGGTGAACGTGTCACACTTGTGTGGTAGG...GAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp ATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACAGGCTGTGAGCACCTGTaGCAATTCTTGGAGGATATG +
Preference number: 4 (lower is better)
Translates to: IGFGKHPEFANDKASPHTGCEHL*QFLEDM
Trigger: CATATCCTCCAAGAATTGTCACAGGTGCTCACAGCC...TGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp GGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGAGAGAAACCATGTaGATGATTGTCGCAAGGGAC +
Preference number: 4 (lower is better)
Translates to: GMAEGFQLLTITSRKRILRRETM*MIVARD
Trigger: GTCCCTTGCGACAATCATTCACATGGTTTCTCTCCT...GAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp CACGTGTTTTTCTCTCAGAGGTGGCCGCTCTTCTGTTATTTCACACAGAAAAAGATCTCAGTAGGCAAATaGGCTGCCATGGACTGGGAT +
Preference number: 4 (lower is better)
Translates to: HVFFSQRWPLFCYFTQKKISVGK*AAMDWD
Trigger: ATCCCAGTCCATGGCAGCTCATTTGCCTACTGAGAT...CTTTTTCTGTGTGAAATAACAGAAGAGCGGCCACCTCTGAGAGAAAAACACGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp TTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAACACTAAGGGTGCTGTaGACGGGGAATATCTGGGAA +
Preference number: 4 (lower is better)
Translates to: LFQGMAEGFQLLTITSRKTLRVL*TGNIWE
Trigger: TTCCCAGATATTCCCCGTTCACAGCACCCTTAGTGT...TTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR GCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCTCGCTTTTCTTGCATTaGAGCTTCAAAGTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRASLFLH*SFKVEL
Trigger: CAGCTCAACTTTGAAGCTGCAATGCAAGAAAAGCGA...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGTCGCTTTTCTTGCATTaGAGCTTCAAAGTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: GFGKHPEFANDKASPHTRSLFLH*SFKVEL
Trigger: CAGCTCAACTTTGAAGCTGCAATGCAAGAAAAGCGA...CCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TGTTGGCTTCAAGTAATGACTGGTGCAGAACATCTGCGTCCGAGTGGCCATAGCCCATTTCGCTTTTCTTaGATTGCAGCTTCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: CWLQVMTGAEHLRPSGHSPFRFS*IAASKL
Trigger: CAACTTTGAAGCTGCAATGCAAGAAAAGCGAAATGG...GCTATGGCCACTCGGACGCAGATGTTCTGCACCAGTCATTACTTGAAGCCAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp AATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACACGGTGGTGGCGAGCATTTaGCTCACTGAGAAATGGTTC +
Preference number: 4 (lower is better)
Translates to: NTQESNLDFKVLPHKCDTVVASI*LTEKWF
Trigger: GAACCATTTCTCAGTGAGGCAAATGCTCGCCACCAC...CGTGTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGATGGGCTCTGCCCACTaGCATTCATCAGCGCCGGGG +
Preference number: 4 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLMGSAH*HSSAPG
Trigger: CCCCGGCGCTGATGAATGGCAGTGGGCAGAGCCCAT...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GTGCTTAATAAGCCGGTCACTGTTGGCACAGTTGTTGATGATGGACAGGGACTGAAACAATGTCCTTGCTaGCCAAGCAAATGGCATTCT +
Preference number: 4 (lower is better)
Translates to: VLNKPVTVGTVVDDGQGLKQCPC*PSKWHS
Trigger: AGAATGCCATTTGCTTGGGCAGCAAGGACATTGTTT...CAGTCCCTGTCCATCATCAACAACTGTGCCAACAGTGACCGGCTTATTAAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp AACTGTATGATCCTGAGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGAAACAATGTCCTTGCTaGCCAAGCAAATGGCATTCT +
Preference number: 4 (lower is better)
Translates to: NCMILRSHRHPGPLFQGMKQCPC*PSKWHS
Trigger: AGAATGCCATTTGCTTGGGCAGCAAGGACATTGTTT...CATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCTCAGGATCATACAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp GTGCTTAATAAGCCGGTCACTGTTGGCACAGTTGTTGATGATGGACAGGGACTGCATTGGATAGCTTATTaGTGTCTTGCCTGTAGATGG +
Preference number: 4 (lower is better)
Translates to: VLNKPVTVGTVVDDGQGLHWIAY*CLACRW
Trigger: CCATCTACAGGCAAGACAGCAATAAGCTATCCAATG...CAGTCCCTGTCCATCATCAACAACTGTGCCAACAGTGACCGGCTTATTAAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCCATTGGATAGCTTATTaGTGTCTTGCCTGTAGATGG +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRAHWIAY*CLACRW
Trigger: CCATCTACAGGCAAGACAGCAATAAGCTATCCAATG...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCCATCCCTCTTCTTCGTaGTTCCTTTACTTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRAHPSSS*FLYLSC
Trigger: ACAACTCAAGTAAAGGAAGCACGAAGAAGAGGGATG...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGGCCGAGACCGGGATGTaGTGCTCGCTTGTCACCACC +
Preference number: 4 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLAETGM*CSLVTT
Trigger: GGTGGTGACAAGCGAGCAGCACATCCCGGTCTCGGC...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAACCGGACCATAATGCCTaGCCATCCCAAGCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNEPDHNA*PSQAPG
Trigger: ACCAGGAGCTTGGGATGGGCAGGCATTATGGTCCGG...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp CTTTCCAGAGTCCATCTGCGCACTGCTCAAGGAGCTCCATCAGCACATCCTCGTTATAATGTTCATGGTTaGACACTACACGGAGAAATT +
Preference number: 4 (lower is better)
Translates to: LSRVHLRTAQGAPSAHPRYNVHG*TLHGEI
Trigger: AATTTCTCCGTGTAGTGTGCAACCATGAACATTATA...ACGAGGATGTGCTGATGGAGCTCCTTGAGCAGTGCGCAGATGGACTCTGGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAAAGGGTGCTTCCCTTCTaGGGCGTCACCAGCGGATTC +
Preference number: 4 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKRVLPF*GVTSGF
Trigger: GAATCCGCTGGTGACGCCGCAGAAGGGAAGCACCCT...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GTTCCCTTAGGACTGCTGAACAATAAACACCCAGCAGCCACCCCAAATGGTCAGGCTTATCCAGGGAATTaGTCTTCTCACTATTCCTTT +
Preference number: 4 (lower is better)
Translates to: VPLGLLNNKHPAATPNGQAYPGN*SSHYSF
Trigger: AAAGGAATAGTGAGAAGAGCAATTCCCTGGATAAGC...CTGACCATTTGGGGTGGCTGCTGGGTGTTTATTGTTCAGCAGTCCTAAGGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448493.7
CDS-3UTR GCA 90 bp GCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATCACACGACCGCTTATCCAGGGAATTaGTCTTCTCACTATTCCTTT +
Preference number: 4 (lower is better)
Translates to: ANDKASPHTRAMRCNHTTAYPGN*SSHYSF
Trigger: AAAGGAATAGTGAGAAGAGCAATTCCCTGGATAAGC...GGTCGTGTGATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGATGTACTGGAACTGGTaGAGGCAGACTTCAGATATT +
Preference number: 4 (lower is better)
Translates to: GFGKHPEFANDKASPHTRMYWNW*RQTSDI
Trigger: AATATCTGAAGTCTGCCTGCACCAGTTCCAGTACAT...CCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAATCCAGGCTGCCCAGCTaGTGCAATCTGGCATGCATC +
Preference number: 4 (lower is better)
Translates to: SSSRVSTTPLLRHNENFESRLPS*CNLACI
Trigger: GATGCATGCCAGATTGCAGCAGCTGGGCAGCCTGGA...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000652315.1
CDS-3UTR GCA 90 bp TGTTGGCTTCAAGTAATGACTGGTGCAGAACATCTGCGTCCGAGTGGCCATAGCACAGATATGATGACTTaGAAATGTGTCCGGACAAAG +
Preference number: 4 (lower is better)
Translates to: CWLQVMTGAEHLRPSGHSTDMMT*KCVRTK
Trigger: CTTTGTCCGGACACATTTGCAAGTCATCATATCTGT...GCTATGGCCACTCGGACGCAGATGTTCTGCACCAGTCATTACTTGAAGCCAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTACAGATATGATGACTTaGAAATGTGTCCGGACAAAG +
Preference number: 4 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFTDMMT*KCVRTK
Trigger: CTTTGTCCGGACACATTTGCAAGTCATCATATCTGT...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp CAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATAATCTGGTTCCCCCAATaGCAACAACGTCTGCTATCA +
Preference number: 4 (lower is better)
Translates to: QGMAEGFQLLTITSRKRIIWFPQ*QQRLLS
Trigger: TGATAGCAGACGTTGTTGGCATTGGGGGAACCAGAT...TATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR GCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAACATGGATCCTGGCCATaGTGTCGAGCCACGTCTTCC +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNEHGSWP*CRATSS
Trigger: GGAAGACGTGGCTCGACAGCATGGCCAGGATCCATG...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAATGCAACTGGAACAGCTaGGAGTCCCTGGCCGTGCAA +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNECNWNS*ESLAVQ
Trigger: TTGCACGGCCAGGGACTCGCAGCTGTTCCAGTTGCA...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
CDS-3UTR GCA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACTGCTGCAATCTGGCATaGATCATTCCTGTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: VIGFGKHPEFANDKASPHCCNLA*IIPVLA
Trigger: AGCCAGAACAGGAATGATGCATGCCAGATTGCAGCA...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000652315.1
CDS-3UTR GCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTCAAGCTTCCACAAATTaGCTGAAAACTTCCTTAAGC +
Preference number: 4 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFQASTN*LKTSLS
Trigger: GCTTAAGGAAGTTTTCAGGCAATTTGTGGAAGCTTG...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAACCTTGGTCCTCCCTGTaGTCGGTCTCCCCAGTGATT +
Preference number: 4 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKPWSSL*SVSPVI
Trigger: AATCACTGGGGAGACCGAGCACAGGGAGGACCAAGG...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAACAGTGCAGCCCTCCCTaGCATGTAGATCCCAGAACC +
Preference number: 4 (lower is better)
Translates to: SSSRVSTTPLLRHNENFEQCSPP*HVDPRT
Trigger: GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTG...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGAAAAGGCATCAATGTCAGTaGAGCCCTCCCTGCCATGTA +
Preference number: 4 (lower is better)
Translates to: AEGFQLLTITSRKRILRKRHQCQ*SPPCHV
Trigger: TACATGGCAGGGAGGGCTGCACTGACATTGATGCCT...TTTCCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR GCA 90 bp GGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCAGATCTTCTCACCTaGTCATGCATGATTTCAGAA +
Preference number: 4 (lower is better)
Translates to: GFGKHPEFANDKASPHTRADLLT*SCMISE
Trigger: TTCTGAAATCATGCATGAGCAGGTGAGAAGATCTGC...CCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442173.5
CDS-3UTR CCA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAGTGATCCCACCCTTCTaGGAACCAAGGGAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKVIPPF*EPREAA
Trigger: TGCTGCCTCCCTTGGTTCCCAGAAGGGTGGGATCAC...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCTGCCTCACTGAGAAATaGTTCAGGTCTACGTGGAAA +
Preference number: 4 (lower is better)
Translates to: GPLFQGMAEGFQLLTITSCLTEK*FRSTWK
Trigger: TTTCCACGTAGACCTGAACCATTTCTCAGTGAGGCA...GCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAGCCCTTGAGGACAGATaGGCTCTGCCCACTGCCATT +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNEALEDR*ALPTAI
Trigger: AATGGCAGTGGGCAGAGCCCATCTGTCCTCAAGGGC...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp ACTAAATCTCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTGCCCTTGAGGACAGATaGGCTCTGCCCACTGCCATT +
Preference number: 4 (lower is better)
Translates to: TKSPGSLVQKLQWSVPLGALEDR*ALPTAI
Trigger: AATGGCAGTGGGCAGAGCCCATCTGTCCTCAAGGGC...ACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGAGATTTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACTTCTTCAGCACCTTCTaGGCCACCTTAGAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: VIGFGKHPEFANDKASPHFFSTF*ATLEES
Trigger: AGACTCTTCTAAGGTGGCCCAGAAGGTGCTGAAGAA...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp CAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATATACTGTCCTAGTCTTTaGCATGCCTGCTTGGCATTC +
Preference number: 4 (lower is better)
Translates to: QGMAEGFQLLTITSRKRIYCPSL*HACLAF
Trigger: GAATGCCAAGCAGGCATGCCAAAGACTAGGACAGTA...TATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp GGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTAGATGGCAGAAAATCTaGCATTTTTGTCAAGATTTC +
Preference number: 4 (lower is better)
Translates to: GVTGIRDLYFRAWLRGFSRWQKI*HFCQDF
Trigger: GAAATCTTGACAAAAATGCCAGATTTTCTGCCATCT...ACTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp AAGAATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACAAGGCGATCATCACGTaGCCTTCCATCGCATGCAGA +
Preference number: 4 (lower is better)
Translates to: KNTQESNLDFKVLPHKCDKAIIT*PSIACR
Trigger: TCTGCATGCGATGGAAGGCCACGTGATGATCGCCTT...GTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp ATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACAAGGACTCGGAACAGCTaGTTTAGGATAGTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: IGFGKHPEFANDKASPHTRTRNS*FRIVGK
Trigger: CTTGCCCACTATCCTAAACCAGCTGTTCCGAGTCCT...TGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCTTCAGAGGCAACATATaGCTCAGCCTTATACGCGTA +
Preference number: 4 (lower is better)
Translates to: GPLFQGMAEGFQLLTITSFRGNI*LSLIRV
Trigger: TACGCGTATAAGGCTGAGCCATATGTTGCCTCTGAA...GCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp ACAGAGCCGCACACATGTCCGCTCTCCCTTCATAGAATGTTGAGGGAAACTTATTCGTGGTCATGGATTTaGTCAGTTCTTCATGCACTG +
Preference number: 4 (lower is better)
Translates to: TEPHTCPLSLHRMLRETYSWSWI*SVLHAL
Trigger: CAGTGCATGAAGAACTGACCAAATCCATGACCACGA...ATAAGTTTCCCTCAACATTCTATGAAGGGAGAGCGGACATGTGTGCGGCTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp GTTCACCAACTATTGGCTCCAAGACACTTTCAGAGTGATGGTGGAGAGAAGCCCGATGCAGGAAATCTCTaGTTTCGCAGCAACTTAACT +
Preference number: 4 (lower is better)
Translates to: VHQLLAPRHFQSDGGEKPDAGNL*FRSNLT
Trigger: AGTTAAGTTGCTGCGAAACCAGAGATTTCCTGCATC...GGGCTTCTCTCCACCATCACTCTGAAAGTGTCTTGGAGCCAATAGTTGGTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp GCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATCACACGACCCTTCTGAGTGATGTGTaGCATCAGCATATTTACAAC +
Preference number: 4 (lower is better)
Translates to: ANDKASPHTRAMRCNHTTLLSDV*HQHIYN
Trigger: GTTGTAAATATGCTGATGCCACACATCACTCAGAAG...GGTCGTGTGATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGGTTCTTAGATGCCTCTaGATTATCTCGAAACTTCTG +
Preference number: 4 (lower is better)
Translates to: GKHPEFANDKASPHTRAMVLRCL*IISKLL
Trigger: CAGAAGTTTCGAGATAATCCAGAGGCATCTAAGAAC...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp CCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATCTCACTATTCCTTTCTaGAAGGCTGTTACCCGAATC +
Preference number: 4 (lower is better)
Translates to: PEFANDKASPHTRAMRCNLTIPF*KAVTRI
Trigger: GATTCGGGTAACAGCCTTCCAGAAAGGAATAGTGAG...ATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp ACTAAATCTCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCCTTCATCTGGGCGGTaGCCATTAGCACCGTGCGTA +
Preference number: 4 (lower is better)
Translates to: TKSPGSLVQKLQWSVPLGPSSGR*PLAPCV
Trigger: TACGCACGGTGCTAATGGCCACCGCCCAGATGAAGG...ACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGAGATTTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACAAGCGGCGGATGTTGTaGGATCTCTCAAACTCTGTT +
Preference number: 4 (lower is better)
Translates to: VIGFGKHPEFANDKASPHKRRML*DLSNSV
Trigger: AACAGAGTTTGAGAGATCCCACAACATCCGCCGCTT...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp ATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACCCGGTCTGCGTAAATaGCATCTCAAACATGAAGCG +
Preference number: 4 (lower is better)
Translates to: IGFGKHPEFANDKASPHTPGLRK*HLKHEA
Trigger: CGCTTCATGTTTGAGATGCCATTTACGCAGACCGGG...TGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACAACCATTGTGCTTGTTaGAGTCCCACTGATGGCGTT +
Preference number: 4 (lower is better)
Translates to: VIGFGKHPEFANDKASPHNHCAC*SPTDGV
Trigger: AACGCCATCAGTGGGACTCCAACAAGCACAATGGTT...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCCTCTCCCCTTCCCCTTaGTCCTCCCTGTGCTCGGTC +
Preference number: 4 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFLSPSP*SSLCSV
Trigger: GACCGAGCACAGGGAGGACCAAGGGGAAGGGGAGAG...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCCTTTATTTCAGGGCATaGCTGAGGGGTTTCAGTTGT +
Preference number: 4 (lower is better)
Translates to: GPLFQGMAEGFQLLTITSLYFRA*LRGFSC
Trigger: ACAACTGAAACCCCTCAGCCATGCCCTGAAATAAAG...GCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp ATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACATACATGTGGCTCTACTaGAAAACTGCCGGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: IGFGKHPEFANDKASPHTYMWLY*KTAGSC
Trigger: ACAGGAGCCGGCAGTTTTCCAGTAGAGCCACATGTA...TGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448493.7
CDS-3UTR CCA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGACCTGTGACAATTCTTaGAGGATATGTGTGTTTGTG +
Preference number: 4 (lower is better)
Translates to: GKHPEFANDKASPHTRAMTCDNS*RICVFV
Trigger: CACAAACACACATATCCTCCAAGAATTGTCACAGGT...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR CAA 72 bp GTGACCTCAGCCAGAAGCTGCTGTTTCAGCAGCAGGTaGTGCTATGCTCCTTTTGAAGACATATTTGTGAAG +
Preference number: 4 (lower is better)
Translates to: VTSARSCCFSSR*CYAPFEDIFVK
Trigger: CTTCACAAATATGTCTTCAAAAGGAGCATAGCACAACCTGCTGCTGAAACAGCAGCTTCTGGCTGAGGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp GACAGATATGATGACTTGCAAATGTGTCCGGACAAAGGACTTCTTTCCAGTGTACAGTCGTTCAGGATCTaGGTCTTCTTCTGGACGATG +
Preference number: 4 (lower is better)
Translates to: DRYDDLQMCPDKGLLSSVQSFRI*VFFWTM
Trigger: CATCGTCCAGAAGAAGACTCAGATCCTGAACGACTG...TACACTGGAAAGAAGTCCTTTGTCCGGACACATTTGCAAGTCATCATATCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR TCA 90 bp GGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCGAAGTTTATCCAACTTaGCCACTTTGTTCGGAAGCT +
Preference number: 4 (lower is better)
Translates to: GPLFQGMAEGFQLLTITSEVYPT*PLCSEA
Trigger: AGCTTCCGAACAAAGTGGTCAAGTTGGATAAACTTC...GCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp CAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATAGATCCATCGCCAAGTTaGATCAGGTGGAAAAATCGT +
Preference number: 4 (lower is better)
Translates to: QGMAEGFQLLTITSRKRIDPSPS*IRWKNR
Trigger: ACGATTTTTCCACCTGATTCAACTTGGCGATGGATC...TATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCTTGCAGCTTCAAAGTTaGGCTGGAGGATCTTATTTA +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRALQLQS*AGGSYL
Trigger: TAAATAAGATCCTCCAGCTCAACTTTGAAGCTGCAA...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATGAGGACAAGTGACTaGAAATATTCCCTGCTTCGG +
Preference number: 4 (lower is better)
Translates to: FQGMAEGFQLLTITSRKRMRTSD*KYSLLR
Trigger: CCGAAGCAGGGAATATTTTCAGTCACTTGTCCTCAT...TCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp TTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGATGTGTGATGCTCCCCTaGAGGACTTTTTCAATTCTG +
Preference number: 4 (lower is better)
Translates to: FQGMAEGFQLLTITSRKRCVMLP*RTFSIL
Trigger: CAGAATTGAAAAAGTCCTTCAGGGGAGCATCACACA...TCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp CAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATATGTGTGATGCTCCCCTaGAGGACTTTTTCAATTCTG +
Preference number: 4 (lower is better)
Translates to: QGMAEGFQLLTITSRKRICVMLP*RTFSIL
Trigger: CAGAATTGAAAAAGTCCTTCAGGGGAGCATCACACA...TATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp ACTAAATCTCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTGCTCAGCGCAATGTGTaGTGCTCCCCTGAAGGACTT +
Preference number: 4 (lower is better)
Translates to: TKSPGSLVQKLQWSVPLGAQRNV*CSPEGL
Trigger: AAGTCCTTCAGGGGAGCATCACACATTGCGCTGAGC...ACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGAGATTTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCAGTCTGCAAGTAACTTaGGCATGTCATCATTGGATA +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRASLQVT*ACHHWI
Trigger: TATCCAATGATGACATGCTCAAGTTACTTGCAGACT...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAACAAAGGCGCTTCTTGTaGAAACTGGCCCACCAGGTC +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNEQRRFL*KLAHQV
Trigger: GACCTGGTGGGCCAGTTTTCACAAGAAGCGCCTTTG...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp ATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGCGTGCTTCCTTTACTTaGGTTGTCACAGCTGACATG +
Preference number: 4 (lower is better)
Translates to: MAEGFQLLTITSRKRILRRASFT*VVTADM
Trigger: CATGTCAGCTGTGACAACTCAAGTAAAGGAAGCACG...CCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp TTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAACGCGTACTTAACATATaGCCTCAAGTGGCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: LFQGMAEGFQLLTITSRKRVLNI*PQVALQ
Trigger: TTGGAGAGCCACTTGAGGTCATATGTTAAGTACGCG...TTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp TTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAATCGGCAGAAGGCTTaGGAATCGTGGTCATGGATT +
Preference number: 4 (lower is better)
Translates to: LFQGMAEGFQLLTITSRKNRQKA*ESWSWI
Trigger: AATCCATGACCACGATTCTCAAGCCTTCTGCCGATT...TTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp CTTCAAGTAATGACTGGTGCAGAACATCTGCGTCCGAGTGGCCATAGCTGTGGTTTCTCTATCAAATGCTaGGCCATAGATTTGATCAGT +
Preference number: 4 (lower is better)
Translates to: LQVMTGAEHLRPSGHSCGFSIKC*AIDLIS
Trigger: ACTGATCAAATCTATGGCTCAGCATTTGATAGAGAA...ACCACAGCTATGGCCACTCGGACGCAGATGTTCTGCACCAGTCATTACTTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR TCA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGTTCTCTATCAAATGCTaGGCCATAGATTTGATCAGT +
Preference number: 4 (lower is better)
Translates to: GKHPEFANDKASPHTRAMFSIKC*AIDLIS
Trigger: ACTGATCAAATCTATGGCTCAGCATTTGATAGAGAA...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACCTCGAAACTTCTGAGTaGTGTGTGGCATCAGCATAT +
Preference number: 4 (lower is better)
Translates to: VIGFGKHPEFANDKASPHLETSE*CVASAY
Trigger: ATATGCTGATGCCACACATCACTCAGAAGTTTCGAG...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp CAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCGAAACTTCTGAGTaGTGTGTGGCATCAGCATAT +
Preference number: 4 (lower is better)
Translates to: QGMAEGFQLLTITSRKRILETSE*CVASAY
Trigger: ATATGCTGATGCCACACATCACTCAGAAGTTTCGAG...TATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCAGGTCTTGGTATCTTTaGATCCTGCCTTTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRARSWYL*ILPFPN
Trigger: ATTTGGAAAAGGCAGGATTCAAAGATACCAAGACCT...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCTGCCTGATGGCTCCTTaGAGCATATCTGTCATCAAA +
Preference number: 4 (lower is better)
Translates to: GMAEGFQLLTITSRKRILCLMAP*SISVIK
Trigger: TTTGATGACAGATATGCTTCAAGGAGCCATCAGGCA...GAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp CGTATCCTTTTGGTTAAGTCCTTCACATCAGAGGAGAAGCTGGTGTGCTTAATAGTGGCTATCCTTGCCTaGTGGCTCCTTGAAGCATAT +
Preference number: 4 (lower is better)
Translates to: RILLVKSFTSEEKLVCLIVAILA*WLLEAY
Trigger: ATATGCTTCAAGGAGCCATCAGGCAAGGATAGCCAC...TATTAAGCACACCAGCTTCTCCTCTGATGTGAAGGACTTAACCAAAAGGATACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR TCA 90 bp AAGAATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACGTGGCTATCCTTGCCTaGTGGCTCCTTGAAGCATAT +
Preference number: 4 (lower is better)
Translates to: KNTQESNLDFKVLPHKCDVAILA*WLLEAY
Trigger: ATATGCTTCAAGGAGCCATCAGGCAAGGATAGCCAC...GTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTCATAAGTTCAGATGTTaGAGCCTTGTTCCAATATGT +
Preference number: 4 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFHKFRC*SLVPIC
Trigger: ACATATTGGAACAAGGCTTCAACATCTGAACTTATG...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp CGTATCCTTTTGGTTAAGTCCTTCACATCAGAGGAGAAGCTGGTGTGCTTAATATCAGCACATCCTCGTTaGAATGGACATCCTGCATCC +
Preference number: 4 (lower is better)
Translates to: RILLVKSFTSEEKLVCLISAHPR*NGHPAS
Trigger: GGATGCAGGATGTCCATTTCAACGAGGATGTGCTGA...TATTAAGCACACCAGCTTCTCCTCTGATGTGAAGGACTTAACCAAAAGGATACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR TCA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACGCTTTCATTTCTTCCTaGTACTCGAGCTGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: VIGFGKHPEFANDKASPHAFISS*YSSWSS
Trigger: AGAAGACCAGCTCGAGTATCAGGAAGAAATGAAAGC...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAACCCACACACGGGCCATaGGATGTAATCACACGACCG +
Preference number: 4 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKPTHGP*DVITRP
Trigger: CGGTCGTGTGATTACATCTCATGGCCCGTGTGTGGG...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTACCCACACACGGGCCATaGGATGTAATCACACGACCG +
Preference number: 4 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLPTHGP*DVITRP
Trigger: CGGTCGTGTGATTACATCTCATGGCCCGTGTGTGGG...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAACCTACCACACAAGTGTaGCACGTTCACCAACTATTG +
Preference number: 4 (lower is better)
Translates to: LFQGMAEGFQLLTITSRKPTTQV*HVHQLL
Trigger: CAATAGTTGGTGAACGTGTCACACTTGTGTGGTAGG...TTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp GCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGAAAATTTCAGGGCATGGCTaGGGGGTTTCAGTTGTTGAC +
Preference number: 4 (lower is better)
Translates to: AEGFQLLTITSRKRILRKISGHG*GVSVVD
Trigger: GTCAACAACTGAAACCCCTCAGCCATGCCCTGAAAT...TTTCCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp ACAGAGCCGCACACATGTCCGCTCTCCCTTCATAGAATGTTGAGGGAAACTTATGGGACAGAAGACTTTTaGGAACTGATTTTAGCACTG +
Preference number: 4 (lower is better)
Translates to: TEPHTCPLSLHRMLRETYGTEDF*ELILAL
Trigger: CAGTGCTAAAATCAGTTCTCAAAAGTCTTCTGTCCC...ATAAGTTTCCCTCAACATTCTATGAAGGGAGAGCGGACATGTGTGCGGCTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp ATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGGTAAACTGCTATCTCTaGGGAAAAGCTAGCACAGGC +
Preference number: 4 (lower is better)
Translates to: MAEGFQLLTITSRKRILRVNCYL*GKASTG
Trigger: GCCTGTGCTAGCTTTTCCTCAGAGATAGCAGTTTAC...CCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp GTCAGTGCGGAGCAATTGGAGGCTATGATGCTAAAGATCCCCAGTGGCCTATCTCAGGTAAAAACCCTGTaGAAAAACTATGGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: VSAEQLEAMMLKIPSGLSQVKTL*KNYGLF
Trigger: AAAAAGGCCATAGTTTTTTCACAGGGTTTTTACCTG...AGATAGGCCACTGGGGATCTTTAGCATCATAGCCTCCAATTGCTCCGCACTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp CACGTGTTTTTCTCTCAGAGGTGGCCGCTCTTCTGTTATTTCACACAGAAAAAGGAGAAACCATGTGAATaGTTGTCGCAAGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: HVFFSQRWPLFCYFTQKKEKPCE*LSQGTG
Trigger: ACCTGTCCCTTGCGACAATCATTCACATGGTTTCTC...CTTTTTCTGTGTGAAATAACAGAAGAGCGGCCACCTCTGAGAGAAAAACACGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp GTTCACCAACTATTGGCTCCAAGACACTTTCAGAGTGATGGTGGAGAGAAGCCCGTGCTATGCTCCTTTTaGAGACATATTTGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: VHQLLAPRHFQSDGGEKPVLCSF*RHICEA
Trigger: AGCTTCACAAATATGTCTTCAAAAGGAGCATAGCAC...GGGCTTCTCTCCACCATCACTCTGAAAGTGTCTTGGAGCCAATAGTTGGTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp ATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGACTGGTAATAAACACTaGGGAGCCTACCCAACTCTG +
Preference number: 4 (lower is better)
Translates to: MAEGFQLLTITSRKRILRTGNKH*GAYPTL
Trigger: CAGAGTTGGGTAGGCTCCTCAGTGTTTATTACCAGT...CCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp ATGACTGGTGCAGAACATCTGCGTCCGAGTGGCCATAGCCATTGTCTACAGAAAGTTAGAAACCACCTTTaGTCGCTAAAGACTAAATGC +
Preference number: 4 (lower is better)
Translates to: MTGAEHLRPSGHSHCLQKVRNHL*SLKTKC
Trigger: GCATTTAGTCTTTAGCGATCAAAGGTGGTTTCTAAC...TTTCTGTAGACAATGGCTATGGCCACTCGGACGCAGATGTTCTGCACCAGTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR GCA 90 bp GGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCTCGCTTTTCTTGCATTaGAGCTTCAAAGTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: GPLFQGMAEGFQLLTITSSLFLH*SFKVEL
Trigger: CAGCTCAACTTTGAAGCTGCAATGCAAGAAAAGCGA...GCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCCCATTTCGCTTTTCTTaGATTGCAGCTTCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRAPFRFS*IAASKL
Trigger: CAACTTTGAAGCTGCAATGCAAGAAAAGCGAAATGG...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTCAGAACCTTCCAATTTaGTTTGTTCATCATCTTCGT +
Preference number: 4 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFQNLPI*FVHHLR
Trigger: ACGAAGATGATGAACAAAGCAAATTGGAAGGTTCTG...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAGATTTCTGCTTCTCTTaGACTCTTGGCAAGTTCCGG +
Preference number: 4 (lower is better)
Translates to: LFQGMAEGFQLLTITSRKDFCFS*TLGKFR
Trigger: CCGGAACTTGCCAAGAGTGCAAGAGAAGCAGAAATC...TTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp AATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACACGGATTTCTGCTTCTCTTaGACTCTTGGCAAGTTCCGG +
Preference number: 4 (lower is better)
Translates to: NTQESNLDFKVLPHKCDTDFCFS*TLGKFR
Trigger: CCGGAACTTGCCAAGAGTGCAAGAGAAGCAGAAATC...CGTGTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCTTTCAGTTTGATTTCTaGTTCTCTTGCACTCTTGGC +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRAFQFDF*FSCTLG
Trigger: GCCAAGAGTGCAAGAGAAGCAGAAATCAAACTGAAA...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGAAAGTGGTGGCGAGCATTTaGCTCACTGAGAAATGGTTC +
Preference number: 4 (lower is better)
Translates to: AEGFQLLTITSRKRILRKVVASI*LTEKWF
Trigger: GAACCATTTCTCAGTGAGGCAAATGCTCGCCACCAC...TTTCCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp TTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAACTGAAAATATTCCCTaGTTCGGATACTGCATGGCG +
Preference number: 4 (lower is better)
Translates to: FQGMAEGFQLLTITSRKRTENIP*FGYCMA
Trigger: CGCCATGCAGTATCCGAAGCAGGGAATATTTTCAGT...TCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp AAGAATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACAGTCTTTGGCATGCCTaGTTGGCATTCTTCAGCACC +
Preference number: 4 (lower is better)
Translates to: KNTQESNLDFKVLPHKCDSLWHA*LAFFST
Trigger: GGTGCTGAAGAATGCCAAGCAGGCATGCCAAAGACT...GTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp CTGGTTCCCCCAATGCCAACAACGTCTGCTATCAGCTGGCTGACAGATATGATGGTCAAGATTTCCAGATaGATCCTTAAACAATGTCCT +
Preference number: 4 (lower is better)
Translates to: LVPPMPTTSAISWLTDMMVKISR*ILKQCP
Trigger: AGGACATTGTTTAAGGATGCATCTGGAAATCTTGAC...CATCATATCTGTCAGCCAGCTGATAGCAGACGTTGTTGGCATTGGGGGAACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTAGAGACCGGGATGTGCTaGTCGCTTGTCACCACCCTT +
Preference number: 4 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLETGMC*SLVTTL
Trigger: AAGGGTGGTGACAAGCGAGCAGCACATCCCGGTCTC...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp CAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATATGGCCTTCCATCGCATaGAGACTCTTAAGGTACTTT +
Preference number: 4 (lower is better)
Translates to: QGMAEGFQLLTITSRKRIWPSIA*RLLRYF
Trigger: AAAGTACCTTAAGAGTCTGCATGCGATGGAAGGCCA...TATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACTGGCCTTCCATCGCATaGAGACTCTTAAGGTACTTT +
Preference number: 4 (lower is better)
Translates to: VIGFGKHPEFANDKASPHWPSIA*RLLRYF
Trigger: AAAGTACCTTAAGAGTCTGCATGCGATGGAAGGCCA...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp CCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATTGCATGATGATAGGATaGAGGAAATCTCTGGTTTCG +
Preference number: 4 (lower is better)
Translates to: PEFANDKASPHTRAMRCNCMMIG*RKSLVS
Trigger: CGAAACCAGAGATTTCCTGCATCCTATCATCATGCA...ATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp AACTGTATGATCCTGAGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGATTCGCGTTCTTAGATaGCTCTGGATTATCTCGAAA +
Preference number: 4 (lower is better)
Translates to: NCMILRSHRHPGPLFQGMIRVLR*LWIISK
Trigger: TTTCGAGATAATCCAGAGGCATCTAAGAACGCGAAT...CATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCTCAGGATCATACAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGGCTTATCCAGGGAATTaGTCTTCTCACTATTCCTTT +
Preference number: 4 (lower is better)
Translates to: ALESILSLQMTKQVPTHGAYPGN*SSHYSF
Trigger: AAAGGAATAGTGAGAAGAGCAATTCCCTGGATAAGC...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp AACTGTATGATCCTGAGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTTATCCAGGGAATTaGTCTTCTCACTATTCCTTT +
Preference number: 4 (lower is better)
Translates to: NCMILRSHRHPGPLFQGMAYPGN*SSHYSF
Trigger: AAAGGAATAGTGAGAAGAGCAATTCCCTGGATAAGC...CATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCTCAGGATCATACAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR GCA 90 bp ACTAAATCTCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTGAGAGTTATCCAGGCTaGCCAGCTGCTGCAATCTGG +
Preference number: 4 (lower is better)
Translates to: TKSPGSLVQKLQWSVPLGESYPG*PAAAIW
Trigger: CCAGATTGCAGCAGCTGGGCAGCCTGGATAACTCTC...ACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGAGATTTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000652315.1
CDS-3UTR GCA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAAGAGAGTTATCCAGGCTaGCCAGCTGCTGCAATCTGG +
Preference number: 4 (lower is better)
Translates to: SSSRVSTTPLLRHNENFEESYPG*PAAAIW
Trigger: CCAGATTGCAGCAGCTGGGCAGCCTGGATAACTCTC...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000652315.1
CDS-3UTR GCA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAGAGAGTTATCCAGGCTaGCCAGCTGCTGCAATCTGG +
Preference number: 4 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKESYPG*PAAAIW
Trigger: CCAGATTGCAGCAGCTGGGCAGCCTGGATAACTCTC...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000652315.1
CDS-3UTR GCA 90 bp ATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACATCAAGTAATGACTGGTaGAGAACATCTGCGTCCGAG +
Preference number: 4 (lower is better)
Translates to: IGFGKHPEFANDKASPHTSSNDW*RTSASE
Trigger: CTCGGACGCAGATGTTCTGCACCAGTCATTACTTGA...TGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp CCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAATCTGGGTCGTTCTCATaGTCCTTCATCTGGGCGGTG +
Preference number: 4 (lower is better)
Translates to: PGSLVQKLQWSVPLGHQKSGSFS*SFIWAV
Trigger: CACCGCCCAGATGAAGGAGCATGAGAACGACCCAGA...TTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTACATGGATCCTGGCCATaGTGTCGAGCCACGTCTTCC +
Preference number: 4 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLHGSWP*CRATSS
Trigger: GGAAGACGTGGCTCGACAGCATGGCCAGGATCCATG...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAGTCCATCTGCGCACTaGTCAAGGAGCTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNESPSAH*SRSSIS
Trigger: GCTGATGGAGCTCCTTGAGCAGTGCGCAGATGGACT...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGAGCCTGCGGCCCGAGTaGATGACCTCGGTCACTTTG +
Preference number: 4 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLSLRPE*MTSVTL
Trigger: CAAAGTGACCGAGGTCATGCACTCGGGCCGCAGGCT...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAACACTTCGCCCTGAGCTaGATCCTTGTATTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKHFALS*ILVLQG
Trigger: CCCCTGCAATACAAGGATGCAGCTCAGGGCGAAGTG...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
CDS-3UTR GCA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGAGTCACCTGGATGTATaGATACTTAGAATCCAGATC +
Preference number: 4 (lower is better)
Translates to: ALESILSLQMTKQVPTHGSHLDV*ILRIQI
Trigger: GATCTGGATTCTAAGTATGCATACATCCAGGTGACT...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp CATGAGAGGATTATGTCCATGGTCGGCCAGGAGCTGGTTCTTAAACGCCAATGTAGTCACCTGGATGTATaGATACTTAGAATCCAGATC +
Preference number: 4 (lower is better)
Translates to: HERIMSMVGQELVLKRQCSHLDV*ILRIQI
Trigger: GATCTGGATTCTAAGTATGCATACATCCAGGTGACT...ACATTGGCGTTTAAGAACCAGCTCCTGGCCGACCATGGACATAATCCTCTCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR GCA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTACAGTGCAGCCCTCCCTaGCATGTAGATCCCAGAACC +
Preference number: 4 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLQCSPP*HVDPRT
Trigger: GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTG...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp ACAGGCTGGTTGTTTTCAGATCTCAGTAGGCAAATGAGCTGCCATGGACTGGGAAGTTGGCTCAAGAGTTaGATTCCATTACTTCACCTT +
Preference number: 4 (lower is better)
Translates to: TGWLFSDLSRQMSCHGLGSWLKS*IPLLHL
Trigger: AAGGTGAAGTAATGGAATGCAACTCTTGAGCCAACT...TCCCAGTCCATGGCAGCTCATTTGCCTACTGAGATCTGAAAACAACCAGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACTGGTTCAGGTCTACGTaGAAATCGGCAGAAATCTTC +
Preference number: 4 (lower is better)
Translates to: VIGFGKHPEFANDKASPHWFRST*KSAEIF
Trigger: GAAGATTTCTGCCGATTTCCACGTAGACCTGAACCA...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp CAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATATGGTTCAGGTCTACGTaGAAATCGGCAGAAATCTTC +
Preference number: 4 (lower is better)
Translates to: QGMAEGFQLLTITSRKRIWFRST*KSAEIF
Trigger: GAAGATTTCTGCCGATTTCCACGTAGACCTGAACCA...TATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAAGCCCTTGAGGACAGATaGGCTCTGCCCACTGCCATT +
Preference number: 4 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKALEDR*ALPTAI
Trigger: AATGGCAGTGGGCAGAGCCCATCTGTCCTCAAGGGC...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp AATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACACGTTCTTCAGCACCTTCTaGGCCACCTTAGAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: NTQESNLDFKVLPHKCDTFFSTF*ATLEES
Trigger: AGACTCTTCTAAGGTGGCCCAGAAGGTGCTGAAGAA...CGTGTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp ATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACATTCTTCAGCACCTTCTaGGCCACCTTAGAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: IGFGKHPEFANDKASPHTFFSTF*ATLEES
Trigger: AGACTCTTCTAAGGTGGCCCAGAAGGTGCTGAAGAA...TGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp ATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGTTTGGCATGCCTGCTTaGCATTCTTCAGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: MAEGFQLLTITSRKRILRFGMPA*HSSAPS
Trigger: AGAAGGTGCTGAAGAATGCCAAGCAGGCATGCCAAA...CCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp TTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAATACTGTCCTAGTCTTTaGCATGCCTGCTTGGCATTC +
Preference number: 4 (lower is better)
Translates to: LFQGMAEGFQLLTITSRKYCPSL*HACLAF
Trigger: GAATGCCAAGCAGGCATGCCAAAGACTAGGACAGTA...TTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp AATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACACGTACTGTCCTAGTCTTTaGCATGCCTGCTTGGCATTC +
Preference number: 4 (lower is better)
Translates to: NTQESNLDFKVLPHKCDTYCPSL*HACLAF
Trigger: GAATGCCAAGCAGGCATGCCAAAGACTAGGACAGTA...CGTGTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCTGTCTTGCCTGTAGATaGCAGAAAATCTGGCATTTT +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRACLACR*QKIWHF
Trigger: AAAATGCCAGATTTTCTGCCATCTACAGGCAAGACA...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp CAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATAAGGCTGAGTGTGTTTTaGTATGCAGGGCACAAATTC +
Preference number: 4 (lower is better)
Translates to: QGMAEGFQLLTITSRKRIRLSVF*YAGHKF
Trigger: GAATTTGTGCCCTGCATACCAAAACACACTCAGCCT...TATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp TTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAAGGCTGAGTGTGTTTTaGTATGCAGGGCACAAATTC +
Preference number: 4 (lower is better)
Translates to: FQGMAEGFQLLTITSRKRRLSVF*YAGHKF
Trigger: GAATTTGTGCCCTGCATACCAAAACACACTCAGCCT...TCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp GGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGAAACGTAAAGGTGATTaGTGTAGATGGTGTAAGGCT +
Preference number: 4 (lower is better)
Translates to: GFGKHPEFANDKASPHTRKRKGD*CRWCKA
Trigger: AGCCTTACACCATCTACACCAATCACCTTTACGTTT...CCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp ATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGTCGTTTCCTAAGGCTTaGGCTCCAGATTCGGTTTTC +
Preference number: 4 (lower is better)
Translates to: MAEGFQLLTITSRKRILRSFPKA*APDSVF
Trigger: GAAAACCGAATCTGGAGCCCAAGCCTTAGGAAACGA...CCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp AATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACACGTCGTTTCCTAAGGCTTaGGCTCCAGATTCGGTTTTC +
Preference number: 4 (lower is better)
Translates to: NTQESNLDFKVLPHKCDTSFPKA*APDSVF
Trigger: GAAAACCGAATCTGGAGCCCAAGCCTTAGGAAACGA...CGTGTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp TTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGATTCAGAGGCAACATATaGCTCAGCCTTATACGCGTA +
Preference number: 4 (lower is better)
Translates to: FQGMAEGFQLLTITSRKRFRGNI*LSLIRV
Trigger: TACGCGTATAAGGCTGAGCCATATGTTGCCTCTGAA...TCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACTCGTGGTCATGGATTTaGTCAGTTCTTCATGCACTG +
Preference number: 4 (lower is better)
Translates to: VIGFGKHPEFANDKASPHSWSWI*SVLHAL
Trigger: CAGTGCATGAAGAACTGACCAAATCCATGACCACGA...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCTCGTGGTCATGGATTTaGTCAGTTCTTCATGCACTG +
Preference number: 4 (lower is better)
Translates to: GMAEGFQLLTITSRKRILSWSWI*SVLHAL
Trigger: CAGTGCATGAAGAACTGACCAAATCCATGACCACGA...GAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCTTCTGAGTGATGTGTaGCATCAGCATATTTACAAC +
Preference number: 4 (lower is better)
Translates to: ALESILSLQMTKQVPTHGLLSDV*HQHIYN
Trigger: GTTGTAAATATGCTGATGCCACACATCACTCAGAAG...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGTTCTTAGATGCCTCTaGATTATCTCGAAACTTCTG +
Preference number: 4 (lower is better)
Translates to: GFGKHPEFANDKASPHTRVLRCL*IISKLL
Trigger: CAGAAGTTTCGAGATAATCCAGAGGCATCTAAGAAC...CCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTAAAGCAATGCCGGAGATaGCGCCCAGCAGGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLKQCRR*RPAGPC
Trigger: ACAAGGACCTGCTGGGCGCCATCTCCGGCATTGCTT...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000652315.1
CDS-3UTR CCA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGAATGTGCTACTTTGTTaGTGCTTATCCAGGGAATTG +
Preference number: 4 (lower is better)
Translates to: ALESILSLQMTKQVPTHGNVLLC*CLSREL
Trigger: CAATTCCCTGGATAAGCACCAACAAAGTAGCACATT...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACGTCTGCTATCAGCTaGCTGACAGATATGATGACT +
Preference number: 4 (lower is better)
Translates to: VIGFGKHPEFANDKASPHTSAIS*LTDMMT
Trigger: AGTCATCATATCTGTCAGCCAGCTGATAGCAGACGT...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp ATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACAAAGCGGCGGATGTTGTaGGATCTCTCAAACTCTGTT +
Preference number: 4 (lower is better)
Translates to: IGFGKHPEFANDKASPHTKRRML*DLSNSV
Trigger: AACAGAGTTTGAGAGATCCCACAACATCCGCCGCTT...TGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAAGGTCAGTGTGGTGCTaGTACATGACAGGGATGCGC +
Preference number: 4 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKRSVWC*YMTGMR
Trigger: GCGCATCCCTGTCATGTACCAGCACCACACTGACCT...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAACGACCGAAGACGAGCTaGTCATCCCGTGAACCATTG +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNERPKTS*SSREPL
Trigger: CAATGGTTCACGGGATGACCAGCTCGTCTTCGGTCG...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
3UTR CAA 72 bp GGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTaGTTGACTATCACAAGCAGGAAAAGAATACTCAGG +
Preference number: 4 (lower is better)
Translates to: GPLFQGMAEGFQ*LTITSRKRILR
Trigger: CCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
3UTR CAA 72 bp AGTAGTTTGTTGCTGGTGAGGAAATCGGCAGAAGGCTaGAGAATCGTGGTCATGGATTTGGTCAGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: SSLLLVRKSAEG*RIVVMDLVSSS
Trigger: TGAAGAACTGACCAAATCCATGACCACGATTCTCAAGCCTTCTGCCGATTTCCTCACCAGCAACAAACTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR CAA 72 bp ACTCATCTGACTCCTCTCTGCCAACCACCATACACTTaGTATCAGCTCTTAATCCCTCTAACGACCGTTTTG +
Preference number: 4 (lower is better)
Translates to: THLTPLCQPPYT*YQLLIPLTTVL
Trigger: CAAAACGGTCGTTAGAGGGATTAAGAGCTGATACAAAGTGTATGGTGGTTGGCAGAGAGGAGTCAGATGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR CAA 72 bp GAAGATGCCATTACTTGGCACTTCACAACAGGCTGGTaGTTTTCAGATCTCAGTAGGCAAATGAGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: EDAITWHFTTGW*FSDLSRQMSCH
Trigger: ATGGCAGCTCATTTGCCTACTGAGATCTGAAAACAACCAGCCTGTTGTGAAGTGCCAAGTAATGGCATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR CAA 72 bp TGCGTAAATGGCATCTCAAACATGAAGCGGCGGATGTaGTGGGATCTCTCAAACTCTGTTTTCCTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: CVNGISNMKRRM*WDLSNSVFLSC
Trigger: GCAAGAAAGGAAAACAGAGTTTGAGAGATCCCACAACATCCGCCGCTTCATGTTTGAGATGCCATTTACGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAACTTCGCAGGCACTGTTaGGCATATGTATCGACCCTG +
Preference number: 4 (lower is better)
Translates to: SSSRVSTTPLLRHNENFELRRHC*AYVSTL
Trigger: CAGGGTCGATACATATGCTCAACAGTGCCTGCGAAG...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACGAAGTTTATCCAACTTaGCCACTTTGTTCGGAAGCT +
Preference number: 4 (lower is better)
Translates to: VIGFGKHPEFANDKASPHEVYPT*PLCSEA
Trigger: AGCTTCCGAACAAAGTGGTCAAGTTGGATAAACTTC...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACCTCATGGTCACGCTaGTGGCACTGTTCATGTTGC +
Preference number: 4 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKTSWSR*WHCSCC
Trigger: GCAACATGAACAGTGCCATCAGCGTGACCATGAGGT...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAATGTTCATCATCTTCGTaGGAGTCGCCATTTCGCTTT +
Preference number: 4 (lower is better)
Translates to: LFQGMAEGFQLLTITSRKCSSSS*ESPFRF
Trigger: AAAGCGAAATGGCGACTCTCACGAAGATGATGAACA...TTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGCATGAAGGATGCCCTTaGGGACAGATGGGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLHEGCP*GQMGSA
Trigger: GGCAGAGCCCATCTGTCCTCAAGGGCATCCTTCATG...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAATGCATGGCGGCTTCATaGAGGATGCCCTTGAGGACA +
Preference number: 4 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKCMAAS*RMPLRT
Trigger: TGTCCTCAAGGGCATCCTTCATGAAGCCGCCATGCA...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAATGAGGACAAGTGACTaGAAATATTCCCTGCTTCGG +
Preference number: 4 (lower is better)
Translates to: LFQGMAEGFQLLTITSRKMRTSD*KYSLLR
Trigger: CCGAAGCAGGGAATATTTTCAGTCACTTGTCCTCAT...TTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTAGCTCAGCGCAATGTGTaGTGCTCCCCTGAAGGACTT +
Preference number: 4 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLAQRNV*CSPEGL
Trigger: AAGTCCTTCAGGGGAGCATCACACATTGCGCTGAGC...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGAAAATGCACTTAAGGGGCTaGGAGTCTTCCTCATCTGAA +
Preference number: 4 (lower is better)
Translates to: AEGFQLLTITSRKRILRKMHLRG*ESSSSE
Trigger: TTCAGATGAGGAAGACTCTCAGCCCCTTAAGTGCAT...TTTCCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000427887.2
ENST00000627024.2
CDS-3UTR TCA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAACAAAGGCGCTTCTTGTaGAAACTGGCCCACCAGGTC +
Preference number: 4 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKQRRFL*KLAHQV
Trigger: GACCTGGTGGGCCAGTTTTCACAAGAAGCGCCTTTG...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp AAGAATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACCGTGCTTCCTTTACTTaGGTTGTCACAGCTGACATG +
Preference number: 4 (lower is better)
Translates to: KNTQESNLDFKVLPHKCDRASFT*VVTADM
Trigger: CATGTCAGCTGTGACAACTCAAGTAAAGGAAGCACG...GTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAACACTGGGCAACCACATaGATAATGACCCGAGTCACG +
Preference number: 4 (lower is better)
Translates to: SSSRVSTTPLLRHNENFEHWATT*IMTRVT
Trigger: CGTGACTCGGGTCATTATTCATGTGGTTGCCCAGTG...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAACACTGGGCAACCACATaGATAATGACCCGAGTCACG +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNEHWATT*IMTRVT
Trigger: CGTGACTCGGGTCATTATTCATGTGGTTGCCCAGTG...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp AAGAATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACCGCGTACTTAACATATaGCCTCAAGTGGCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: KNTQESNLDFKVLPHKCDRVLNI*PQVALQ
Trigger: TTGGAGAGCCACTTGAGGTCATATGTTAAGTACGCG...GTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp ATTAGAATCTTGATTTGTGTCACGTGTTTTTCTCTCAGAGGTGGCCGCTCTTCTAATCGGCAGAAGGCTTaGGAATCGTGGTCATGGATT +
Preference number: 4 (lower is better)
Translates to: IRILICVTCFSLRGGRSSNRQKA*ESWSWI
Trigger: AATCCATGACCACGATTCTCAAGCCTTCTGCCGATT...AGAAGAGCGGCCACCTCTGAGAGAAAAACACGTGACACAAATCAAGATTCTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCTTCTCTATCAAATGCTaGGCCATAGATTTGATCAGT +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRAFSIKC*AIDLIS
Trigger: ACTGATCAAATCTATGGCTCAGCATTTGATAGAGAA...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAATTATCTCGAAACTTCTaGGTGATGTGTGGCATCAGC +
Preference number: 4 (lower is better)
Translates to: LFQGMAEGFQLLTITSRKLSRNF*VMCGIS
Trigger: GCTGATGCCACACATCACTCAGAAGTTTCGAGATAA...TTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp AAGAATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACAAGACAGCAAGGCTATaGTTCGCGTTCTTAGATGCC +
Preference number: 4 (lower is better)
Translates to: KNTQESNLDFKVLPHKCDKTARL*FAFLDA
Trigger: GGCATCTAAGAACGCGAATCATAGCCTTGCTGTCTT...GTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp ACAGAGCCGCACACATGTCCGCTCTCCCTTCATAGAATGTTGAGGGAAACTTATAGGTCTTGGTATCTTTaGATCCTGCCTTTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: TEPHTCPLSLHRMLRETYRSWYL*ILPFPN
Trigger: ATTTGGAAAAGGCAGGATTCAAAGATACCAAGACCT...ATAAGTTTCCCTCAACATTCTATGAAGGGAGAGCGGACATGTGTGCGGCTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR TCA 90 bp CCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATAGGTCTTGGTATCTTTaGATCCTGCCTTTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: PEFANDKASPHTRAMRCNRSWYL*ILPFPN
Trigger: ATTTGGAAAAGGCAGGATTCAAAGATACCAAGACCT...ATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACGTTGATGTTTGGAGTTaGGGTTGTATATGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: VIGFGKHPEFANDKASPHVDVWS*GCIWRS
Trigger: GCTTCTCCATATACAACCTCAACTCCAAACATCAAC...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp CCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAAACACGCCTTTCCGTGTaGGATATTCTGCCACTAGGG +
Preference number: 4 (lower is better)
Translates to: PGSLVQKLQWSVPLGHQKTRLSV*DILPLG
Trigger: CCCTAGTGGCAGAATATCTCACACGGAAAGGCGTGT...TTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000400228.6
ENST00000448493.7
ENST00000630992.2
CDS-3UTR TCA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTAGCTTCCACTTCGCCCTaGGCTGCATCCTTGTATTGC +
Preference number: 4 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLASTSP*AASLYC
Trigger: GCAATACAAGGATGCAGCTCAGGGCGAAGTGGAAGC...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
CDS-3UTR TCA 90 bp ATTCCAAGCACACTTGATATCTTTCTCACACTGGCTATGTATCGCTTCCCCATGAGTTTAAGGAGTCTCTaGGAAATTTCCGACAGCGGT +
Preference number: 4 (lower is better)
Translates to: IPSTLDIFLTLAMYRFPMSLRSL*EISDSG
Trigger: ACCGCTGTCGGAAATTTCTCAGAGACTCCTTAAACT...CATGGGGAAGCGATACATAGCCAGTGTGAGAAAGATATCAAGTGTGCTTGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAATGGCATCTCAAACATaGAGCGGCGGATGTTGTGGG +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNEMASQT*SGGCCG
Trigger: CCCACAACATCCGCCGCTTCATGTTTGAGATGCCAT...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GTCTTTTTAATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCCACACACGGGCCATaGGATGTAATCACACGACCG +
Preference number: 4 (lower is better)
Translates to: VFLIQMWYRMFNYSRAVIPTHGP*DVITRP
Trigger: CGGTCGTGTGATTACATCTCATGGCCCGTGTGTGGG...AATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTATTAAAAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAACTCCCAGACGCAAGCTaGAGATGCCATTACTTGGCA +
Preference number: 4 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKLPDAS*RCHYLA
Trigger: TGCCAAGTAATGGCATCTTCAGCTTGCGTCTGGGAG...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR GCA 90 bp CCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAATTGTACAGCCAGCCATaGTTGGTGATCCCACCCTTC +
Preference number: 4 (lower is better)
Translates to: PGSLVQKLQWSVPLGHQKLYSQP*LVIPPF
Trigger: GAAGGGTGGGATCACCAAGCATGGCTGGCTGTACAA...TTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp CGTATCCTTTTGGTTAAGTCCTTCACATCAGAGGAGAAGCTGGTGTGCTTAATAGATTTCTGCTTCTCTTaGACTCTTGGCAAGTTCCGG +
Preference number: 4 (lower is better)
Translates to: RILLVKSFTSEEKLVCLIDFCFS*TLGKFR
Trigger: CCGGAACTTGCCAAGAGTGCAAGAGAAGCAGAAATC...TATTAAGCACACCAGCTTCTCCTCTGATGTGAAGGACTTAACCAAAAGGATACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCGTCAAGATTTCCAGATaGATCCTTAAACAATGTCCT +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRAVKISR*ILKQCP
Trigger: AGGACATTGTTTAAGGATGCATCTGGAAATCTTGAC...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACCATTGGATAGCTTATTaGTGTCTTGCCTGTAGATGG +
Preference number: 4 (lower is better)
Translates to: VIGFGKHPEFANDKASPHHWIAY*CLACRW
Trigger: CCATCTACAGGCAAGACAGCAATAAGCTATCCAATG...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp AATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACACGGAGTGTGTTTTGGTATaGAGGGCACAAATTCCTCCA +
Preference number: 4 (lower is better)
Translates to: NTQESNLDFKVLPHKCDTECVLV*RAQIPP
Trigger: TGGAGGAATTTGTGCCCTGCATACCAAAACACACTC...CGTGTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp GGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCCATCCCTCTTCTTCGTaGTTCCTTTACTTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: GMAEGFQLLTITSRKRILHPSSS*FLYLSC
Trigger: ACAACTCAAGTAAAGGAAGCACGAAGAAGAGGGATG...GAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp TTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGATGCATGATGATAGGATaGAGGAAATCTCTGGTTTCG +
Preference number: 4 (lower is better)
Translates to: FQGMAEGFQLLTITSRKRCMMIG*RKSLVS
Trigger: CGAAACCAGAGATTTCCTGCATCCTATCATCATGCA...TCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGAAGCATCATCAGACATaGTCTTTAAGATGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: ALESILSLQMTKQVPTHGKHHQT*SLRCRG
Trigger: TCCTCTACATCTTAAAGAGCATGTCTGATGATGCTT...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp ACAGGCTGGTTGTTTTCAGATCTCAGTAGGCAAATGAGCTGCCATGGACTGGGAAAGCATCATCAGACATaGTCTTTAAGATGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: TGWLFSDLSRQMSCHGLGKHHQT*SLRCRG
Trigger: TCCTCTACATCTTAAAGAGCATGTCTGATGATGCTT...TCCCAGTCCATGGCAGCTCATTTGCCTACTGAGATCTGAAAACAACCAGCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR GCA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCAAGCATCATCAGACATaGTCTTTAAGATGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: FGKHPEFANDKASPHTRAKHHQT*SLRCRG
Trigger: TCCTCTACATCTTAAAGAGCATGTCTGATGATGCTT...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACATGTACTGGAACTGGTaGAGGCAGACTTCAGATATT +
Preference number: 4 (lower is better)
Translates to: VIGFGKHPEFANDKASPHMYWNW*RQTSDI
Trigger: AATATCTGAAGTCTGCCTGCACCAGTTCCAGTACAT...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp CCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAAAGGCTGCCCAGCTGCTaGAATCTGGCATGCATCATT +
Preference number: 4 (lower is better)
Translates to: PGSLVQKLQWSVPLGHQKRLPSC*NLACII
Trigger: AATGATGCATGCCAGATTGCAGCAGCTGGGCAGCCT...TTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000652315.1
CDS-3UTR GCA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAAAGGCTGCCCAGCTGCTaGAATCTGGCATGCATCATT +
Preference number: 4 (lower is better)
Translates to: SSSRVSTTPLLRHNENFERLPSC*NLACII
Trigger: AATGATGCATGCCAGATTGCAGCAGCTGGGCAGCCT...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000652315.1
CDS-3UTR GCA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCTCCAGGCTGCCCAGCTaGTGCAATCTGGCATGCATC +
Preference number: 4 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFSRLPS*CNLACI
Trigger: GATGCATGCCAGATTGCAGCAGCTGGGCAGCCTGGA...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000652315.1
CDS-3UTR GCA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTAAGTCCATCTGCGCACTaGTCAAGGAGCTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLSPSAH*SRSSIS
Trigger: GCTGATGGAGCTCCTTGAGCAGTGCGCAGATGGACT...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAATTTCCAGAGTCCATCTaGGCACTGCTCAAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKFPESI*ALLKEL
Trigger: GAGCTCCTTGAGCAGTGCGCAGATGGACTCTGGAAA...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCTGCAACTGGAACAGCTaGGAGTCCCTGGCCGTGCAA +
Preference number: 4 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFCNWNS*ESLAVQ
Trigger: TTGCACGGCCAGGGACTCGCAGCTGTTCCAGTTGCA...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
CDS-3UTR GCA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGCAGTGCAGCCCTCCCTaGCATGTAGATCCCAGAACC +
Preference number: 4 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLQCSPP*HVDPRT
Trigger: GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTG...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GTCTTTTTAATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCAGTGCAGCCCTCCCTaGCATGTAGATCCCAGAACC +
Preference number: 4 (lower is better)
Translates to: VFLIQMWYRMFNYSRAVIQCSPP*HVDPRT
Trigger: GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTG...AATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTATTAAAAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp CCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAAAGGCATCAATGTCAGTaGAGCCCTCCCTGCCATGTA +
Preference number: 4 (lower is better)
Translates to: PGSLVQKLQWSVPLGHQKRHQCQ*SPPCHV
Trigger: TACATGGCAGGGAGGGCTGCACTGACATTGATGCCT...TTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAAGGCATCAATGTCAGTaGAGCCCTCCCTGCCATGTA +
Preference number: 4 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKRHQCQ*SPPCHV
Trigger: TACATGGCAGGGAGGGCTGCACTGACATTGATGCCT...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAGGCATCAATGTCAGTaGAGCCCTCCCTGCCATGTA +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNERHQCQ*SPPCHV
Trigger: TACATGGCAGGGAGGGCTGCACTGACATTGATGCCT...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGATGGAGCGTTACCAATaGCGGAGATGGCGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLMERYQ*RRWRPA
Trigger: TGCTGGGCGCCATCTCCGGCATTGGTAACGCTCCAT...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR GCA 90 bp CAAAGGCTGAGAAGCTGTCAGTGTCCAACAGGTACACACCACCCATTTGTAGTGATTCTAGCCACAAACTaGTACGTTCTTCTGGAATTA +
Preference number: 4 (lower is better)
Translates to: QRLRSCQCPTGTHHPFVVILATN*YVLLEL
Trigger: TAATTCCAGAAGAACGTAGCAGTTTGTGGCTAGAAT...CACTACAAATGGGTGGTGTGTACCTGTTGGACACTGACAGCTTCTCAGCCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGGCTTCAAAGTTGAGCTaGAGGATCTTATTTAGAATT +
Preference number: 4 (lower is better)
Translates to: GKHPEFANDKASPHTRAMASKLS*RILFRI
Trigger: AATTCTAAATAAGATCCTCCAGCTCAACTTTGAAGC...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp ACTAAATCTCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCTTCTCTTGCACTCTTaGCAAGTTCCGGCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: TKSPGSLVQKLQWSVPLGLLLHS*QVPAGS
Trigger: GCTACCTGCCGGAACTTGCCAAGAGTGCAAGAGAAG...ACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGAGATTTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAATGGTTCAGGTCTACGTaGAAATCGGCAGAAATCTTC +
Preference number: 4 (lower is better)
Translates to: LFQGMAEGFQLLTITSRKWFRST*KSAEIF
Trigger: GAAGATTTCTGCCGATTTCCACGTAGACCTGAACCA...TTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp AATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACACGTGCCTCACTGAGAAATaGTTCAGGTCTACGTGGAAA +
Preference number: 4 (lower is better)
Translates to: NTQESNLDFKVLPHKCDTCLTEK*FRSTWK
Trigger: TTTCCACGTAGACCTGAACCATTTCTCAGTGAGGCA...CGTGTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCGCCCTTGAGGACAGATaGGCTCTGCCCACTGCCATT +
Preference number: 4 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFALEDR*ALPTAI
Trigger: AATGGCAGTGGGCAGAGCCCATCTGTCCTCAAGGGC...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGAAATTCTTCAGCACCTTCTaGGCCACCTTAGAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: AEGFQLLTITSRKRILRKFFSTF*ATLEES
Trigger: AGACTCTTCTAAGGTGGCCCAGAAGGTGCTGAAGAA...TTTCCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTAGATGGCAGAAAATCTaGCATTTTTGTCAAGATTTC +
Preference number: 4 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFRWQKI*HFCQDF
Trigger: GAAATCTTGACAAAAATGCCAGATTTTCTGCCATCT...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGGCAGAAAATCTaGCATTTTTGTCAAGATTTC +
Preference number: 4 (lower is better)
Translates to: GKHPEFANDKASPHTRAMRWQKI*HFCQDF
Trigger: GAAATCTTGACAAAAATGCCAGATTTTCTGCCATCT...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAAACGTAAAGGTGATTaGTGTAGATGGTGTAAGGCT +
Preference number: 4 (lower is better)
Translates to: GPLFQGMAEGFQLLTITSKRKGD*CRWCKA
Trigger: AGCCTTACACCATCTACACCAATCACCTTTACGTTT...GCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp ACAGAGCCGCACACATGTCCGCTCTCCCTTCATAGAATGTTGAGGGAAACTTATAAACGTAAAGGTGATTaGTGTAGATGGTGTAAGGCT +
Preference number: 4 (lower is better)
Translates to: TEPHTCPLSLHRMLRETYKRKGD*CRWCKA
Trigger: AGCCTTACACCATCTACACCAATCACCTTTACGTTT...ATAAGTTTCCCTCAACATTCTATGAAGGGAGAGCGGACATGTGTGCGGCTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp CCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAAAAGGCGATCATCACGTaGCCTTCCATCGCATGCAGA +
Preference number: 4 (lower is better)
Translates to: PGSLVQKLQWSVPLGHQKKAIIT*PSIACR
Trigger: TCTGCATGCGATGGAAGGCCACGTGATGATCGCCTT...TTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGG
44% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAAAAGGCGATCATCACGTaGCCTTCCATCGCATGCAGA +
Preference number: 4 (lower is better)
Translates to: SSSRVSTTPLLRHNENFEKAIIT*PSIACR
Trigger: TCTGCATGCGATGGAAGGCCACGTGATGATCGCCTT...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp ATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGTCGTGGTCATGGATTTaGTCAGTTCTTCATGCACTG +
Preference number: 4 (lower is better)
Translates to: MAEGFQLLTITSRKRILRSWSWI*SVLHAL
Trigger: CAGTGCATGAAGAACTGACCAAATCCATGACCACGA...CCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp AATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACACGTTCAAAGAGGGTCTTTaGGTCTCCAGGAGCAAAACA +
Preference number: 4 (lower is better)
Translates to: NTQESNLDFKVLPHKCDTFKEGL*VSRSKT
Trigger: TGTTTTGCTCCTGGAGACCCAAAGACCCTCTTTGAA...CGTGTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAAGCAATGCCGGAGATaGCGCCCAGCAGGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFKQCRR*RPAGPC
Trigger: ACAAGGACCTGCTGGGCGCCATCTCCGGCATTGCTT...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000652315.1
CDS-3UTR CCA 90 bp CCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATAATGTGCTACTTTGTTaGTGCTTATCCAGGGAATTG +
Preference number: 4 (lower is better)
Translates to: PEFANDKASPHTRAMRCNNVLLC*CLSREL
Trigger: CAATTCCCTGGATAAGCACCAACAAAGTAGCACATT...ATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTACGCTTCCCCATGTACTaGAACTGGTGCAGGCAGACT +
Preference number: 4 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLRFPMY*NWCRQT
Trigger: AGTCTGCCTGCACCAGTTCCAGTACATGGGGAAGCG...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAAAGAGGATTATGTCCATaGTCGGCCAGGAGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: SSSRVSTTPLLRHNENFERGLCP*SARSWF
Trigger: GAACCAGCTCCTGGCCGACCATGGACATAATCCTCT...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAGAGGATTATGTCCATaGTCGGCCAGGAGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNERGLCP*SARSWF
Trigger: GAACCAGCTCCTGGCCGACCATGGACATAATCCTCT...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAAGGGACTGCTGGAATCTaGTTCCCCCAATGCCAACAA +
Preference number: 4 (lower is better)
Translates to: SSSRVSTTPLLRHNENFEGTAGI*FPQCQQ
Trigger: TTGTTGGCATTGGGGGAACCAGATTCCAGCAGTCCC...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp CCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAAGGGACTGCTGGAATCTaGTTCCCCCAATGCCAACAA +
Preference number: 4 (lower is better)
Translates to: PGSLVQKLQWSVPLGHQKGTAGI*FPQCQQ
Trigger: TTGTTGGCATTGGGGGAACCAGATTCCAGCAGTCCC...TTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp ACTAAATCTCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCTCCTCGTCGATGTTTaGGGTAATGACCCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: TKSPGSLVQKLQWSVPLGLLVDV*GNDPEG
Trigger: GCCTTCAGGGTCATTACCCCAAACATCGACGAGGAG...ACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGAGATTTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAACTCCTCGTCGATGTTTaGGGTAATGACCCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKLLVDV*GNDPEG
Trigger: GCCTTCAGGGTCATTACCCCAAACATCGACGAGGAG...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAATCACTGTCTGTAAACTaGTATTGCGCTGCCTGCCCG +
Preference number: 4 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKSLSVN*YCAACP
Trigger: CGGGCAGGCAGCGCAATACCAGTTTACAGACAGTGA...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000652315.1
CDS-3UTR CCA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAAGTATGGCTGTCAGGATaGTGCGCCGTTTGCACTGCT +
Preference number: 4 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKVWLSG*CAVCTA
Trigger: AGCAGTGCAAACGGCGCACCATCCTGACAGCCATAC...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACACTCACGCTGCCCTaGAGTTTGAGCTGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKTLTLP*SLSCSL
Trigger: CAAACTGCAGCTCAAACTCCAGGGCAGCGTGAGTGT...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp CCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAAACACTCACGCTGCCCTaGAGTTTGAGCTGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: PGSLVQKLQWSVPLGHQKTLTLP*SLSCSL
Trigger: CAAACTGCAGCTCAAACTCCAGGGCAGCGTGAGTGT...TTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp ACTAAATCTCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTACACTCACGCTGCCCTaGAGTTTGAGCTGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: TKSPGSLVQKLQWSVPLGTLTLP*SLSCSL
Trigger: CAAACTGCAGCTCAAACTCCAGGGCAGCGTGAGTGT...ACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGAGATTTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGAAAAACCATTGTGCTTGTTaGAGTCCCACTGATGGCGTT +
Preference number: 4 (lower is better)
Translates to: AEGFQLLTITSRKRILRKNHCAC*SPTDGV
Trigger: AACGCCATCAGTGGGACTCCAACAAGCACAATGGTT...TTTCCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp ACAGAGCCGCACACATGTCCGCTCTCCCTTCATAGAATGTTGAGGGAAACTTATGATAAATTTGGGCATTaGTGTGGGGTTTCTCATGTT +
Preference number: 4 (lower is better)
Translates to: TEPHTCPLSLHRMLRETYDKFGH*CGVSHV
Trigger: AACATGAGAAACCCCACACCAATGCCCAAATTTATC...ATAAGTTTCCCTCAACATTCTATGAAGGGAGAGCGGACATGTGTGCGGCTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR CAA 72 bp GTGGTCATGGATTTGGTCAGTTCTTCATGCACTGTCTaGTATTCAGAGGCAACATATGGCTCAGCCTTATAC +
Preference number: 4 (lower is better)
Translates to: VVMDLVSSSCTV*YSEATYGSALY
Trigger: GTATAAGGCTGAGCCATATGTTGCCTCTGAATACAAGACAGTGCATGAAGAACTGACCAAATCCATGACCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR CAA 72 bp AAATCGGCAGAAGGCTTGAGAATCGTGGTCATGGATTaGGTCAGTTCTTCATGCACTGTCTTGTATTCAGAG +
Preference number: 4 (lower is better)
Translates to: KSAEGLRIVVMD*VSSSCTVLYSE
Trigger: CTCTGAATACAAGACAGTGCATGAAGAACTGACCAAATCCATGACCACGATTCTCAAGCCTTCTGCCGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAAACAGAAGGGAAGCTCTaGGCTGCCGTACTAGAATCC +
Preference number: 4 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKTEGKL*AAVLES
Trigger: GGATTCTAGTACGGCAGCTCAGAGCTTCCCTTCTGT...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448493.7
CDS-3UTR TCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAACAGTCGTTCAGGATCTaGGTCTTCTTCTGGACGATG +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNEQSFRI*VFFWTM
Trigger: CATCGTCCAGAAGAAGACTCAGATCCTGAACGACTG...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp CCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACAGTCGTTCAGGATCTaGGTCTTCTTCTGGACGATG +
Preference number: 4 (lower is better)
Translates to: PGSLVQKLQWSVPLGHQKQSFRI*VFFWTM
Trigger: CATCGTCCAGAAGAAGACTCAGATCCTGAACGACTG...TTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAAACCTCATGGTCACGCTaGTGGCACTGTTCATGTTGC +
Preference number: 4 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKTSWSR*WHCSCC
Trigger: GCAACATGAACAGTGCCATCAGCGTGACCATGAGGT...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp CGTATCCTTTTGGTTAAGTCCTTCACATCAGAGGAGAAGCTGGTGTGCTTAATAGATCCATCGCCAAGTTaGATCAGGTGGAAAAATCGT +
Preference number: 4 (lower is better)
Translates to: RILLVKSFTSEEKLVCLIDPSPS*IRWKNR
Trigger: ACGATTTTTCCACCTGATTCAACTTGGCGATGGATC...TATTAAGCACACCAGCTTCTCCTCTGATGTGAAGGACTTAACCAAAAGGATACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR TCA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACTTGCAGCTTCAAAGTTaGGCTGGAGGATCTTATTTA +
Preference number: 4 (lower is better)
Translates to: VIGFGKHPEFANDKASPHLQLQS*AGGSYL
Trigger: TAAATAAGATCCTCCAGCTCAACTTTGAAGCTGCAA...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp AATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACACGAAACTTCTCTTCAAATaGCTTCACTTCTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: NTQESNLDFKVLPHKCDTKLLFK*LHFWLS
Trigger: GCTGAGCCAGAAGTGAAGTCATTTGAAGAGAAGTTT...CGTGTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp TTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAAGTCTGCAAGTAACTTaGGCATGTCATCATTGGATA +
Preference number: 4 (lower is better)
Translates to: FQGMAEGFQLLTITSRKRSLQVT*ACHHWI
Trigger: TATCCAATGATGACATGCTCAAGTTACTTGCAGACT...TCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp CCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATCCTCATCTGAATCTTTaGATTCAATGCAAATCGCAA +
Preference number: 4 (lower is better)
Translates to: PEFANDKASPHTRAMRCNPHLNL*IQCKSQ
Trigger: TTGCGATTTGCATTGAATTCAAAGATTCAGATGAGG...ATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GTCTTTTTAATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCAAAGGCGCTTCTTGTaGAAACTGGCCCACCAGGTC +
Preference number: 4 (lower is better)
Translates to: VFLIQMWYRMFNYSRAVIQRRFL*KLAHQV
Trigger: GACCTGGTGGGCCAGTTTTCACAAGAAGCGCCTTTG...AATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTATTAAAAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAATGCTTTTCATGCAGCTaGGTGGGCAACTCTATTTTA +
Preference number: 4 (lower is better)
Translates to: LFQGMAEGFQLLTITSRKCFSCS*VGNSIL
Trigger: TAAAATAGAGTTGCCCACTCAGCTGCATGAAAAGCA...TTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp GGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGTCTTGGTATCTTTaGATCCTGCCTTTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: GMAEGFQLLTITSRKRILRSWYL*ILPFPN
Trigger: ATTTGGAAAAGGCAGGATTCAAAGATACCAAGACCT...GAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp GCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGAAATGCCTGATGGCTCCTTaGAGCATATCTGTCATCAAA +
Preference number: 4 (lower is better)
Translates to: AEGFQLLTITSRKRILRKCLMAP*SISVIK
Trigger: TTTGATGACAGATATGCTTCAAGGAGCCATCAGGCA...TTTCCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp CCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAAGTGGCTATCCTTGCCTaGTGGCTCCTTGAAGCATAT +
Preference number: 4 (lower is better)
Translates to: PGSLVQKLQWSVPLGHQKVAILA*WLLEAY
Trigger: ATATGCTTCAAGGAGCCATCAGGCAAGGATAGCCAC...TTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp ATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACATTTCTCACACTGTTaGTGTTTGGAGTTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: IGFGKHPEFANDKASPHTHFSHC*CLELRL
Trigger: CAACCTCAACTCCAAACATCAACAGTGTGAGAAATG...TGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp CCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATCATAAGTTCAGATGTTaGAGCCTTGTTCCAATATGT +
Preference number: 4 (lower is better)
Translates to: PEFANDKASPHTRAMRCNHKFRC*SLVPIC
Trigger: ACATATTGGAACAAGGCTTCAACATCTGAACTTATG...ATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAAGAGATCGCCATTTTTaGCATGGATCCTGGCCATGC +
Preference number: 4 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKRDRHF*HGSWPC
Trigger: GCATGGCCAGGATCCATGTCAAAAATGGCGATCTCT...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAGAGATCGCCATTTTTaGCATGGATCCTGGCCATGC +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNERDRHF*HGSWPC
Trigger: GCATGGCCAGGATCCATGTCAAAAATGGCGATCTCT...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp CCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAAGCACATTGCTGCCTCTaGGAGATCGCCATTTTTGAC +
Preference number: 4 (lower is better)
Translates to: PGSLVQKLQWSVPLGHQKAHCCL*EIAIFD
Trigger: GTCAAAAATGGCGATCTCTCAGAGGCAGCAATGTGC...TTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAATCAGCACATCCTCGTTaGAATGGACATCCTGCATCC +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNESAHPR*NGHPAS
Trigger: GGATGCAGGATGTCCATTTCAACGAGGATGTGCTGA...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAATCAGCACATCCTCGTTaGAATGGACATCCTGCATCC +
Preference number: 4 (lower is better)
Translates to: SSSRVSTTPLLRHNENFESAHPR*NGHPAS
Trigger: GGATGCAGGATGTCCATTTCAACGAGGATGTGCTGA...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAGCCTGCATTCTCGGCTaGAAACGCAAGTCAGAAAGT +
Preference number: 4 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKACILG*KRKSES
Trigger: ACTTTCTGACTTGCGTTTTCAGCCGAGAATGCAGGC...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
CDS-3UTR TCA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTATGTGGTGCTGGTACATaGCAGGGATGCGCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLCGAGT*QGCASS
Trigger: TGAAGAAGCGCATCCCTGTCATGTACCAGCACCACA...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTAGAGCTGGTCATCCCGTaGACCATTGTGCTTGTTGGA +
Preference number: 4 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLELVIP*TIVLVG
Trigger: TCCAACAAGCACAATGGTTCACGGGATGACCAGCTC...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp CCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAAAACTGCCGGCTCCTGTaGTTTGCTTGGGATTGTTCT +
Preference number: 4 (lower is better)
Translates to: PGSLVQKLQWSVPLGHQKNCRLL*FAWDCS
Trigger: AGAACAATCCCAAGCAAATCACAGGAGCCGGCAGTT...TTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGG
43% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448493.7
CDS-3UTR GCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACAAACAAGCTCTGTaGTTCCTCTTCCGCCTTCGC +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNENKQAL*FLFRLR
Trigger: GCGAAGGCGGAAGAGGAAGCACAGAGCTTGTTTGTT...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp ATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACATTCCACTTCACTGTCTaGTGCCAAGAGATAACTACT +
Preference number: 4 (lower is better)
Translates to: IGFGKHPEFANDKASPHTFHFTV*CQEITT
Trigger: AGTAGTTATCTCTTGGCAGCAGACAGTGAAGTGGAA...TGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGATTTCAGTTTGATTTCTaGTTCTCTTGCACTCTTGGC +
Preference number: 4 (lower is better)
Translates to: FQGMAEGFQLLTITSRKRFQFDF*FSCTLG
Trigger: GCCAAGAGTGCAAGAGAAGCAGAAATCAAACTGAAA...TCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACTTTCAGTTTGATTTCTaGTTCTCTTGCACTCTTGGC +
Preference number: 4 (lower is better)
Translates to: VIGFGKHPEFANDKASPHFQFDF*FSCTLG
Trigger: GCCAAGAGTGCAAGAGAAGCAGAAATCAAACTGAAA...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAGTGGTGGCGAGCATTTaGCTCACTGAGAAATGGTTC +
Preference number: 4 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKVVASI*LTEKWF
Trigger: GAACCATTTCTCAGTGAGGCAAATGCTCGCCACCAC...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp CCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAAGTGGTGGCGAGCATTTaGCTCACTGAGAAATGGTTC +
Preference number: 4 (lower is better)
Translates to: PGSLVQKLQWSVPLGHQKVVASI*LTEKWF
Trigger: GAACCATTTCTCAGTGAGGCAAATGCTCGCCACCAC...TTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAGGACAGATGGGCTCTaGCCACTGCCATTCATCAGC +
Preference number: 4 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFRTDGL*PLPFIS
Trigger: GCTGATGAATGGCAGTGGGCAGAGCCCATCTGTCCT...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGAGGACAGATGGGCTCTaGCCACTGCCATTCATCAGC +
Preference number: 4 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLRTDGL*PLPFIS
Trigger: GCTGATGAATGGCAGTGGGCAGAGCCCATCTGTCCT...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAAGTCTTTGGCATGCCTaGTTGGCATTCTTCAGCACC +
Preference number: 4 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKSLWHA*LAFFST
Trigger: GGTGCTGAAGAATGCCAAGCAGGCATGCCAAAGACT...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp AATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACACGAAACAATGTCCTTGCTaGCCAAGCAAATGGCATTCT +
Preference number: 4 (lower is better)
Translates to: NTQESNLDFKVLPHKCDTKQCPC*PSKWHS
Trigger: AGAATGCCATTTGCTTGGGCAGCAAGGACATTGTTT...CGTGTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp CACGTGTTTTTCTCTCAGAGGTGGCCGCTCTTCTGTTATTTCACACAGAAAAAGAAACAATGTCCTTGCTaGCCAAGCAAATGGCATTCT +
Preference number: 4 (lower is better)
Translates to: HVFFSQRWPLFCYFTQKKKQCPC*PSKWHS
Trigger: AGAATGCCATTTGCTTGGGCAGCAAGGACATTGTTT...CTTTTTCTGTGTGAAATAACAGAAGAGCGGCCACCTCTGAGAGAAAAACACGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR GCA 90 bp ATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACTTAAACAATGTCCTTaGTGCCCAAGCAAATGGCAT +
Preference number: 4 (lower is better)
Translates to: IGFGKHPEFANDKASPHTLKQCP*CPSKWH
Trigger: ATGCCATTTGCTTGGGCAGCAAGGACATTGTTTAAG...TGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp CCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATGTCAAGATTTCCAGATaGATCCTTAAACAATGTCCT +
Preference number: 4 (lower is better)
Translates to: PEFANDKASPHTRAMRCNVKISR*ILKQCP
Trigger: AGGACATTGTTTAAGGATGCATCTGGAAATCTTGAC...ATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp CTCCTTCGCCATTTCCCTGTAGTTGGCTTTCATTTCTTCCTGATACTCGAGCTGGTCAAGATTTCCAGATaGATCCTTAAACAATGTCCT +
Preference number: 4 (lower is better)
Translates to: LLRHFPVVGFHFFLILELVKISR*ILKQCP
Trigger: AGGACATTGTTTAAGGATGCATCTGGAAATCTTGAC...CAGCTCGAGTATCAGGAAGAAATGAAAGCCAACTACAGGGAAATGGCGAAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR GCA 90 bp TTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAACATTGGATAGCTTATTaGTGTCTTGCCTGTAGATGG +
Preference number: 4 (lower is better)
Translates to: LFQGMAEGFQLLTITSRKHWIAY*CLACRW
Trigger: CCATCTACAGGCAAGACAGCAATAAGCTATCCAATG...TTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp AAGAATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACTACAACGGTTTCCACTaGATGATGATAGGATGCAGG +
Preference number: 4 (lower is better)
Translates to: KNTQESNLDFKVLPHKCDYNGFH*MMIGCR
Trigger: CCTGCATCCTATCATCATGCAGTGGAAACCGTTGTA...GTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACATTCGCGTTCTTAGATaGCTCTGGATTATCTCGAAA +
Preference number: 4 (lower is better)
Translates to: VIGFGKHPEFANDKASPHIRVLR*LWIISK
Trigger: TTTCGAGATAATCCAGAGGCATCTAAGAACGCGAAT...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGTATAATGTTCATGGTTaGACACTACACGGAGAAATT +
Preference number: 4 (lower is better)
Translates to: GFGKHPEFANDKASPHTRYNVHG*TLHGEI
Trigger: AATTTCTCCGTGTAGTGTGCAACCATGAACATTATA...CCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTATATATGGAGAAGCAATaGCGGAGATGGCGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLYMEKQ*RRWRPA
Trigger: TGCTGGGCGCCATCTCCGGCATTGCTTCTCCATATA...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000652315.1
CDS-3UTR GCA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCCTGGTGCAGAACATCTaGGTCCGAGTGGCCATAGCT +
Preference number: 4 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFLVQNI*VRVAIA
Trigger: AGCTATGGCCACTCGGACGCAGATGTTCTGCACCAG...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000652315.1
CDS-3UTR GCA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGCTGGTGCAGAACATCTaGGTCCGAGTGGCCATAGCT +
Preference number: 4 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLLVQNI*VRVAIA
Trigger: AGCTATGGCCACTCGGACGCAGATGTTCTGCACCAG...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000652315.1
CDS-3UTR GCA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAGTCCATCTGCGCACTaGTCAAGGAGCTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFSPSAH*SRSSIS
Trigger: GCTGATGGAGCTCCTTGAGCAGTGCGCAGATGGACT...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GTCTTTTTAATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTAGTCCATCTGCGCACTaGTCAAGGAGCTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: VFLIQMWYRMFNYSRAVISPSAH*SRSSIS
Trigger: GCTGATGGAGCTCCTTGAGCAGTGCGCAGATGGACT...AATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTATTAAAAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTATTTCCAGAGTCCATCTaGGCACTGCTCAAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLFPESI*ALLKEL
Trigger: GAGCTCCTTGAGCAGTGCGCAGATGGACTCTGGAAA...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAATTCAGGTCAGTGTGGTaGTGGTACATGACAGGGATG +
Preference number: 4 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKFRSVW*WYMTGM
Trigger: CATCCCTGTCATGTACCAGCACCACACTGACCTGAA...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp CCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAATTCAGGTCAGTGTGGTaGTGGTACATGACAGGGATG +
Preference number: 4 (lower is better)
Translates to: PGSLVQKLQWSVPLGHQKFRSVW*WYMTGM
Trigger: CATCCCTGTCATGTACCAGCACCACACTGACCTGAA...TTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp CAAAGGCTGAGAAGCTGTCAGTGTCCAACAGGTACACACCACCCATTTGTAGTGGCTTCAAAGTTGAGCTaGAGGATCTTATTTAGAATT +
Preference number: 4 (lower is better)
Translates to: QRLRSCQCPTGTHHPFVVASKLS*RILFRI
Trigger: AATTCTAAATAAGATCCTCCAGCTCAACTTTGAAGC...CACTACAAATGGGTGGTGTGTACCTGTTGGACACTGACAGCTTCTCAGCCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp GGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCTTCAAAGTTGAGCTaGAGGATCTTATTTAGAATT +
Preference number: 4 (lower is better)
Translates to: GFGKHPEFANDKASPHTRASKLS*RILFRI
Trigger: AATTCTAAATAAGATCCTCCAGCTCAACTTTGAAGC...CCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTACTTCTCTTGCACTCTTaGCAAGTTCCGGCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLLLLHS*QVPAGS
Trigger: GCTACCTGCCGGAACTTGCCAAGAGTGCAAGAGAAG...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp AAGAATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACTGGTTCAGGTCTACGTaGAAATCGGCAGAAATCTTC +
Preference number: 4 (lower is better)
Translates to: KNTQESNLDFKVLPHKCDWFRST*KSAEIF
Trigger: GAAGATTTCTGCCGATTTCCACGTAGACCTGAACCA...GTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp AACTGTATGATCCTGAGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGAGATGGCAGAAAATCTaGCATTTTTGTCAAGATTTC +
Preference number: 4 (lower is better)
Translates to: NCMILRSHRHPGPLFQGMRWQKI*HFCQDF
Trigger: GAAATCTTGACAAAAATGCCAGATTTTCTGCCATCT...CATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCTCAGGATCATACAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp ACTAAATCTCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTAGGACTCGGAACAGCTaGTTTAGGATAGTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: TKSPGSLVQKLQWSVPLGRTRNS*FRIVGK
Trigger: CTTGCCCACTATCCTAAACCAGCTGTTCCGAGTCCT...ACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGAGATTTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACCTTCTGAGTGATGTGTaGCATCAGCATATTTACAAC +
Preference number: 4 (lower is better)
Translates to: VIGFGKHPEFANDKASPHLLSDV*HQHIYN
Trigger: GTTGTAAATATGCTGATGCCACACATCACTCAGAAG...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp AAGAATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACTTCAAAGAGGGTCTTTaGGTCTCCAGGAGCAAAACA +
Preference number: 4 (lower is better)
Translates to: KNTQESNLDFKVLPHKCDFKEGL*VSRSKT
Trigger: TGTTTTGCTCCTGGAGACCCAAAGACCCTCTTTGAA...GTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAAGGGACTGCTGGAATCTaGTTCCCCCAATGCCAACAA +
Preference number: 4 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKGTAGI*FPQCQQ
Trigger: TTGTTGGCATTGGGGGAACCAGATTCCAGCAGTCCC...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTACTCCTCGTCGATGTTTaGGGTAATGACCCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLLLVDV*GNDPEG
Trigger: GCCTTCAGGGTCATTACCCCAAACATCGACGAGGAG...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGCCACGTCTTCCATCATaGAGGCCTCCTCGTCGATGT +
Preference number: 4 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLPRLPS*RPPRRC
Trigger: ACATCGACGAGGAGGCCTCCATGATGGAAGACGTGG...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp CCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAAACATCCTCGTTGAAATaGACATCCTGCATCCCCACG +
Preference number: 4 (lower is better)
Translates to: PGSLVQKLQWSVPLGHQKTSSLK*TSCIPT
Trigger: CGTGGGGATGCAGGATGTCCATTTCAACGAGGATGT...TTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAAACATCCTCGTTGAAATaGACATCCTGCATCCCCACG +
Preference number: 4 (lower is better)
Translates to: SSSRVSTTPLLRHNENFETSSLK*TSCIPT
Trigger: CGTGGGGATGCAGGATGTCCATTTCAACGAGGATGT...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAACATCCTCGTTGAAATaGACATCCTGCATCCCCACG +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNETSSLK*TSCIPT
Trigger: CGTGGGGATGCAGGATGTCCATTTCAACGAGGATGT...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAAGCGTGTCATACAGATaGGCCAGCCTCTCAAAATCC +
Preference number: 4 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKSVSYR*ASLSKS
Trigger: GGATTTTGAGAGGCTGGCCCATCTGTATGACACGCT...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAAGGGAAGCAGTGTATaGCTGTCAGGATGGTGCGCC +
Preference number: 4 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFKGSSV*LSGWCA
Trigger: GGCGCACCATCCTGACAGCCATACACTGCTTCCCTT...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGAGGTCAGTGTGGTGCTaGTACATGACAGGGATGCGC +
Preference number: 4 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLRSVWC*YMTGMR
Trigger: GCGCATCCCTGTCATGTACCAGCACCACACTGACCT...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAGGTCAGTGTGGTGCTaGTACATGACAGGGATGCGC +
Preference number: 4 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFRSVWC*YMTGMR
Trigger: GCGCATCCCTGTCATGTACCAGCACCACACTGACCT...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCCGACCGAAGACGAGCTaGTCATCCCGTGAACCATTG +
Preference number: 4 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFRPKTS*SSREPL
Trigger: CAATGGTTCACGGGATGACCAGCTCGTCTTCGGTCG...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAACGTTCACCAACTATTaGCTCCAAGACACTTTCAGA +
Preference number: 4 (lower is better)
Translates to: LFQGMAEGFQLLTITSRKTFTNY*LQDTFR
Trigger: TCTGAAAGTGTCTTGGAGCCAATAGTTGGTGAACGT...TTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp AAGAATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACCTTTATTTCAGGGCATaGCTGAGGGGTTTCAGTTGT +
Preference number: 4 (lower is better)
Translates to: KNTQESNLDFKVLPHKCDLYFRA*LRGFSC
Trigger: ACAACTGAAACCCCTCAGCCATGCCCTGAAATAAAG...GTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
3UTR CAA 72 bp CCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTaGACTATCACAAGCAGGAAAAGAATACTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: PLFQGMAEGFQL*TITSRKRILRK
Trigger: TTTCCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp GTCTTTTTAATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCTTCGCAGGCACTGTTaGGCATATGTATCGACCCTG +
Preference number: 4 (lower is better)
Translates to: VFLIQMWYRMFNYSRAVILRRHC*AYVSTL
Trigger: CAGGGTCGATACATATGCTCAACAGTGCCTGCGAAG...AATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTATTAAAAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GACAGATATGATGACTTGCAAATGTGTCCGGACAAAGGACTTCTTTCCAGTGTAGAAGTTTATCCAACTTaGCCACTTTGTTCGGAAGCT +
Preference number: 4 (lower is better)
Translates to: DRYDDLQMCPDKGLLSSVEVYPT*PLCSEA
Trigger: AGCTTCCGAACAAAGTGGTCAAGTTGGATAAACTTC...TACACTGGAAAGAAGTCCTTTGTCCGGACACATTTGCAAGTCATCATATCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR TCA 90 bp AATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACACGTTGCAGCTTCAAAGTTaGGCTGGAGGATCTTATTTA +
Preference number: 4 (lower is better)
Translates to: NTQESNLDFKVLPHKCDTLQLQS*AGGSYL
Trigger: TAAATAAGATCCTCCAGCTCAACTTTGAAGCTGCAA...CGTGTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp TTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAATTGCAGCTTCAAAGTTaGGCTGGAGGATCTTATTTA +
Preference number: 4 (lower is better)
Translates to: LFQGMAEGFQLLTITSRKLQLQS*AGGSYL
Trigger: TAAATAAGATCCTCCAGCTCAACTTTGAAGCTGCAA...TTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp AAGAATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACAAACTTCTCTTCAAATaGCTTCACTTCTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: KNTQESNLDFKVLPHKCDKLLFK*LHFWLS
Trigger: GCTGAGCCAGAAGTGAAGTCATTTGAAGAGAAGTTT...GTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp AATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACACGAGTCTGCAAGTAACTTaGGCATGTCATCATTGGATA +
Preference number: 4 (lower is better)
Translates to: NTQESNLDFKVLPHKCDTSLQVT*ACHHWI
Trigger: TATCCAATGATGACATGCTCAAGTTACTTGCAGACT...CGTGTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTACCTCCACTTCAAACGTaGTGGGAGTTTTACTGCAGG +
Preference number: 4 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLPPLQT*WEFYCR
Trigger: CCTGCAGTAAAACTCCCATCACGTTTGAAGTGGAGG...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp CAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACCTCATCTGAATCTTTaGATTCAATGCAAATCGCAA +
Preference number: 4 (lower is better)
Translates to: QGMAEGFQLLTITSRKRIPHLNL*IQCKSQ
Trigger: TTGCGATTTGCATTGAATTCAAAGATTCAGATGAGG...TATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp ACTAAATCTCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTATGCACTTAAGGGGCTaGGAGTCTTCCTCATCTGAA +
Preference number: 4 (lower is better)
Translates to: TKSPGSLVQKLQWSVPLGMHLRG*ESSSSE
Trigger: TTCAGATGAGGAAGACTCTCAGCCCCTTAAGTGCAT...ACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGAGATTTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000652315.1
CDS-3UTR TCA 90 bp AAGAATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACTGCTTTTCATGCAGCTaGGTGGGCAACTCTATTTTA +
Preference number: 4 (lower is better)
Translates to: KNTQESNLDFKVLPHKCDCFSCS*VGNSIL
Trigger: TAAAATAGAGTTGCCCACTCAGCTGCATGAAAAGCA...GTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAACGTGCTTCCTTTACTTaGGTTGTCACAGCTGACATG +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNERASFT*VVTADM
Trigger: CATGTCAGCTGTGACAACTCAAGTAAAGGAAGCACG...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAACGCGTACTTAACATATaGCCTCAAGTGGCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKRVLNI*PQVALQ
Trigger: TTGGAGAGCCACTTGAGGTCATATGTTAAGTACGCG...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp ACTAAATCTCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCGCGTACTTAACATATaGCCTCAAGTGGCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: TKSPGSLVQKLQWSVPLGRVLNI*PQVALQ
Trigger: TTGGAGAGCCACTTGAGGTCATATGTTAAGTACGCG...ACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGAGATTTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACTTCTCTATCAAATGCTaGGCCATAGATTTGATCAGT +
Preference number: 4 (lower is better)
Translates to: VIGFGKHPEFANDKASPHFSIKC*AIDLIS
Trigger: ACTGATCAAATCTATGGCTCAGCATTTGATAGAGAA...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAAAGACAGCAAGGCTATaGTTCGCGTTCTTAGATGCC +
Preference number: 4 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKKTARL*FAFLDA
Trigger: GGCATCTAAGAACGCGAATCATAGCCTTGCTGTCTT...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAAAAGACAGCAAGGCTATaGTTCGCGTTCTTAGATGCC +
Preference number: 4 (lower is better)
Translates to: SSSRVSTTPLLRHNENFEKTARL*FAFLDA
Trigger: GGCATCTAAGAACGCGAATCATAGCCTTGCTGTCTT...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp CGTATCCTTTTGGTTAAGTCCTTCACATCAGAGGAGAAGCTGGTGTGCTTAATAGTTGATGTTTGGAGTTaGGGTTGTATATGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: RILLVKSFTSEEKLVCLIVDVWS*GCIWRS
Trigger: GCTTCTCCATATACAACCTCAACTCCAAACATCAAC...TATTAAGCACACCAGCTTCTCCTCTGATGTGAAGGACTTAACCAAAAGGATACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR TCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAACCGAATCTGTGCTTATaGGAGATCCTCTCGAATCAG +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNEPNLCL*EILSNQ
Trigger: CTGATTCGAGAGGATCTCTCATAAGCACAGATTCGG...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAACCGAATCTGTGCTTATaGGAGATCCTCTCGAATCAG +
Preference number: 4 (lower is better)
Translates to: SSSRVSTTPLLRHNENFEPNLCL*EILSNQ
Trigger: CTGATTCGAGAGGATCTCTCATAAGCACAGATTCGG...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp CCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACCGAATCTGTGCTTATaGGAGATCCTCTCGAATCAG +
Preference number: 4 (lower is better)
Translates to: PGSLVQKLQWSVPLGHQKPNLCL*EILSNQ
Trigger: CTGATTCGAGAGGATCTCTCATAAGCACAGATTCGG...TTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAAGCACATTGCTGCCTCTaGGAGATCGCCATTTTTGAC +
Preference number: 4 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKAHCCL*EIAIFD
Trigger: GTCAAAAATGGCGATCTCTCAGAGGCAGCAATGTGC...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTAGCACATTGCTGCCTCTaGGAGATCGCCATTTTTGAC +
Preference number: 4 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLAHCCL*EIAIFD
Trigger: GTCAAAAATGGCGATCTCTCAGAGGCAGCAATGTGC...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAACTGCTTCTTTCCGTGTaGGATATTCTGCCACTAGGG +
Preference number: 4 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKLLLSV*DILPLG
Trigger: CCCTAGTGGCAGAATATCTCACACGGAAAGAAGCAG...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000652315.1
CDS-3UTR TCA 90 bp ACTAAATCTCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTTTTCCGACAGCGGTGTaGGTTTGGGTTCCTTGTAAA +
Preference number: 4 (lower is better)
Translates to: TKSPGSLVQKLQWSVPLGFPTAV*VWVPCK
Trigger: TTTACAAGGAACCCAAACTCACACCGCTGTCGGAAA...ACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGAGATTTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGATGGCATCTCAAACATaGAGCGGCGGATGTTGTGGG +
Preference number: 4 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLMASQT*SGGCCG
Trigger: CCCACAACATCCGCCGCTTCATGTTTGAGATGCCAT...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAATTTACCGCTAAGGCTTaGCCGCAAGCTTCCACAAAT +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNEFTAKA*PQASTN
Trigger: ATTTGTGGAAGCTTGCGGTCAAGCCTTAGCGGTAAA...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAATTTACCGCTAAGGCTTaGCCGCAAGCTTCCACAAAT +
Preference number: 4 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKFTAKA*PQASTN
Trigger: ATTTGTGGAAGCTTGCGGTCAAGCCTTAGCGGTAAA...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp CCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAATTTACCGCTAAGGCTTaGCCGCAAGCTTCCACAAAT +
Preference number: 4 (lower is better)
Translates to: PGSLVQKLQWSVPLGHQKFTAKA*PQASTN
Trigger: ATTTGTGGAAGCTTGCGGTCAAGCCTTAGCGGTAAA...TTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAATGGCGTTGAAGATGTaGAGGGAATTCGGTAAGACG +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNEMALKM*REFGKT
Trigger: CGTCTTACCGAATTCCCTTCACATCTTCAACGCCAT...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGGAGCTGGTCATCCCGTaGACCATTGTGCTTGTTGGA +
Preference number: 4 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLELVIP*TIVLVG
Trigger: TCCAACAAGCACAATGGTTCACGGGATGACCAGCTC...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp ACTAAATCTCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTTCACCTGCTCATGCATaGTTTCAGAAAGCTCCTTCG +
Preference number: 4 (lower is better)
Translates to: TKSPGSLVQKLQWSVPLGSPAHA*FQKAPS
Trigger: CGAAGGAGCTTTCTGAAATCATGCATGAGCAGGTGA...ACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGAGATTTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442173.5
CDS-3UTR GCA 90 bp AAGAATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACTTCCACTTCACTGTCTaGTGCCAAGAGATAACTACT +
Preference number: 4 (lower is better)
Translates to: KNTQESNLDFKVLPHKCDFHFTV*CQEITT
Trigger: AGTAGTTATCTCTTGGCAGCAGACAGTGAAGTGGAA...GTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp ATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGCCATTTCGCTTTTCTTaGATTGCAGCTTCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: MAEGFQLLTITSRKRILRPFRFS*IAASKL
Trigger: CAACTTTGAAGCTGCAATGCAAGAAAAGCGAAATGG...CCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp GGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCCAGAACCTTCCAATTTaGTTTGTTCATCATCTTCGT +
Preference number: 4 (lower is better)
Translates to: GMAEGFQLLTITSRKRILQNLPI*FVHHLR
Trigger: ACGAAGATGATGAACAAAGCAAATTGGAAGGTTCTG...GAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp ACTAAATCTCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTGATTTCTGCTTCTCTTaGACTCTTGGCAAGTTCCGG +
Preference number: 4 (lower is better)
Translates to: TKSPGSLVQKLQWSVPLGDFCFS*TLGKFR
Trigger: CCGGAACTTGCCAAGAGTGCAAGAGAAGCAGAAATC...ACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGAGATTTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGAAACTTAAACAATGTCCTTaGTGCCCAAGCAAATGGCAT +
Preference number: 4 (lower is better)
Translates to: AEGFQLLTITSRKRILRKLKQCP*CPSKWH
Trigger: ATGCCATTTGCTTGGGCAGCAAGGACATTGTTTAAG...TTTCCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp AAGAATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACCATTGGATAGCTTATTaGTGTCTTGCCTGTAGATGG +
Preference number: 4 (lower is better)
Translates to: KNTQESNLDFKVLPHKCDHWIAY*CLACRW
Trigger: CCATCTACAGGCAAGACAGCAATAAGCTATCCAATG...GTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp GCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGAAACATCCCTCTTCTTCGTaGTTCCTTTACTTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: AEGFQLLTITSRKRILRKHPSSS*FLYLSC
Trigger: ACAACTCAAGTAAAGGAAGCACGAAGAAGAGGGATG...TTTCCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp GCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGAAATGCATGATGATAGGATaGAGGAAATCTCTGGTTTCG +
Preference number: 4 (lower is better)
Translates to: AEGFQLLTITSRKRILRKCMMIG*RKSLVS
Trigger: CGAAACCAGAGATTTCCTGCATCCTATCATCATGCA...TTTCCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp TGGTTCTTAAACGCCAATGTAAATAGAGAAAGCGTGTCCAGAGCTGTCAGGCAAATTCGCGTTCTTAGATaGCTCTGGATTATCTCGAAA +
Preference number: 4 (lower is better)
Translates to: WFLNANVNRESVSRAVRQIRVLR*LWIISK
Trigger: TTTCGAGATAATCCAGAGGCATCTAAGAACGCGAAT...TTGCCTGACAGCTCTGGACACGCTTTCTCTATTTACATTGGCGTTTAAGAACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR GCA 90 bp ATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGATTCGCGTTCTTAGATaGCTCTGGATTATCTCGAAA +
Preference number: 4 (lower is better)
Translates to: MAEGFQLLTITSRKRILRIRVLR*LWIISK
Trigger: TTTCGAGATAATCCAGAGGCATCTAAGAACGCGAAT...CCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp AATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACACGCGGAATTTCCCAATGTaGTACTTTGTTGGTGCTTAT +
Preference number: 4 (lower is better)
Translates to: NTQESNLDFKVLPHKCDTRNFPM*YFVGAY
Trigger: ATAAGCACCAACAAAGTAGCACATTGGGAAATTCCG...CGTGTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR GCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAATCAAGTAATGACTGGTaGAGAACATCTGCGTCCGAG +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNESSNDW*RTSASE
Trigger: CTCGGACGCAGATGTTCTGCACCAGTCATTACTTGA...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp ACTAAATCTCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTTCAAGTAATGACTGGTaGAGAACATCTGCGTCCGAG +
Preference number: 4 (lower is better)
Translates to: TKSPGSLVQKLQWSVPLGSSNDW*RTSASE
Trigger: CTCGGACGCAGATGTTCTGCACCAGTCATTACTTGA...ACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGAGATTTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp CCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAAAATGCCAACAACGTCTaGTATCAGCTGGCTGACAGA +
Preference number: 4 (lower is better)
Translates to: PGSLVQKLQWSVPLGHQKNANNV*YQLADR
Trigger: TCTGTCAGCCAGCTGATAGCAGACGTTGTTGGCATT...TTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGG
42% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAAAATGCCAACAACGTCTaGTATCAGCTGGCTGACAGA +
Preference number: 4 (lower is better)
Translates to: SSSRVSTTPLLRHNENFENANNV*YQLADR
Trigger: TCTGTCAGCCAGCTGATAGCAGACGTTGTTGGCATT...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAAATGCCAACAACGTCTaGTATCAGCTGGCTGACAGA +
Preference number: 4 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKNANNV*YQLADR
Trigger: TCTGTCAGCCAGCTGATAGCAGACGTTGTTGGCATT...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAAATCTGGTTCCCCCAATaGCAACAACGTCTGCTATCA +
Preference number: 4 (lower is better)
Translates to: SSSRVSTTPLLRHNENFEIWFPQ*QQRLLS
Trigger: TGATAGCAGACGTTGTTGGCATTGGGGGAACCAGAT...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGTTTCCAGAGTCCATCTaGGCACTGCTCAAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLFPESI*ALLKEL
Trigger: GAGCTCCTTGAGCAGTGCGCAGATGGACTCTGGAAA...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCTTTCCAGAGTCCATCTaGGCACTGCTCAAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFFPESI*ALLKEL
Trigger: GAGCTCCTTGAGCAGTGCGCAGATGGACTCTGGAAA...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAATGCTGCAATCTGGCATaGATCATTCCTGTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKCCNLA*IIPVLA
Trigger: AGCCAGAACAGGAATGATGCATGCCAGATTGCAGCA...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000652315.1
CDS-3UTR GCA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTATGCCTCTTCCCGGTCTaGGTAAATGGCATCTCAAAC +
Preference number: 4 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLCLFPV*VNGISN
Trigger: GTTTGAGATGCCATTTACGCAGACCGGGAAGAGGCA...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAATGCCTCTTCCCGGTCTaGGTAAATGGCATCTCAAAC +
Preference number: 4 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKCLFPV*VNGISN
Trigger: GTTTGAGATGCCATTTACGCAGACCGGGAAGAGGCA...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTATTCAGGTCAGTGTGGTaGTGGTACATGACAGGGATG +
Preference number: 4 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLFRSVW*WYMTGM
Trigger: CATCCCTGTCATGTACCAGCACCACACTGACCTGAA...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp ATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACAAGCTTCCACAAATTaGCTGAAAACTTCCTTAAGC +
Preference number: 4 (lower is better)
Translates to: IGFGKHPEFANDKASPHTQASTN*LKTSLS
Trigger: GCTTAAGGAAGTTTTCAGGCAATTTGTGGAAGCTTG...TGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAGGGCAGATCTGCTCATaGATGATTTCAGAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKGQICS*MISESS
Trigger: GGAGCTTTCTGAAATCATGCATGAGCAGATCTGCCC...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400228.6
ENST00000448493.7
ENST00000630992.2
CDS-3UTR GCA 90 bp ATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACAATGACACACCTCGGATaGACCAAACCTTTAAAGTAT +
Preference number: 4 (lower is better)
Translates to: IGFGKHPEFANDKASPHTMTHLG*TKPLKY
Trigger: ATACTTTAAAGGTTTGGTGCATCCGAGGTGTGTCAT...TGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448493.7
CDS-3UTR GCA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTAATGAGGGACAGGAAATaGGAATGGTGCTGGCCAATC +
Preference number: 4 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLMRDRK*EWCWPI
Trigger: GATTGGCCAGCACCATTCGCATTTCCTGTCCCTCAT...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR GCA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGACCTCAGCCAGAAGCTaGTGTTTCAGCAGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLTSARS*CFSSRL
Trigger: CAACCTGCTGCTGAAACAGCAGCTTCTGGCTGAGGT...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAATTTGGCATGCCTGCTTaGCATTCTTCAGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: SSSRVSTTPLLRHNENFEFGMPA*HSSAPS
Trigger: AGAAGGTGCTGAAGAATGCCAAGCAGGCATGCCAAA...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAATTTGGCATGCCTGCTTaGCATTCTTCAGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNEFGMPA*HSSAPS
Trigger: AGAAGGTGCTGAAGAATGCCAAGCAGGCATGCCAAA...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAATGTCTTGCCTGTAGATaGCAGAAAATCTGGCATTTT +
Preference number: 4 (lower is better)
Translates to: LFQGMAEGFQLLTITSRKCLACR*QKIWHF
Trigger: AAAATGCCAGATTTTCTGCCATCTACAGGCAAGACA...TTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp AATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACACGAAACGTAAAGGTGATTaGTGTAGATGGTGTAAGGCT +
Preference number: 4 (lower is better)
Translates to: NTQESNLDFKVLPHKCDTKRKGD*CRWCKA
Trigger: AGCCTTACACCATCTACACCAATCACCTTTACGTTT...CGTGTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAATCGTTTCCTAAGGCTTaGGCTCCAGATTCGGTTTTC +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNESFPKA*APDSVF
Trigger: GAAAACCGAATCTGGAGCCCAAGCCTTAGGAAACGA...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAATCGTTTCCTAAGGCTTaGGCTCCAGATTCGGTTTTC +
Preference number: 4 (lower is better)
Translates to: SSSRVSTTPLLRHNENFESFPKA*APDSVF
Trigger: GAAAACCGAATCTGGAGCCCAAGCCTTAGGAAACGA...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAATCGTTTCCTAAGGCTTaGGCTCCAGATTCGGTTTTC +
Preference number: 4 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKSFPKA*APDSVF
Trigger: GAAAACCGAATCTGGAGCCCAAGCCTTAGGAAACGA...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGAAAGATGCAGGAAATCTCTaGTTTCGCAGCAACTTAACT +
Preference number: 4 (lower is better)
Translates to: AEGFQLLTITSRKRILRKDAGNL*FRSNLT
Trigger: AGTTAAGTTGCTGCGAAACCAGAGATTTCCTGCATC...TTTCCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp TTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAACTTCTGAGTGATGTGTaGCATCAGCATATTTACAAC +
Preference number: 4 (lower is better)
Translates to: LFQGMAEGFQLLTITSRKLLSDV*HQHIYN
Trigger: GTTGTAAATATGCTGATGCCACACATCACTCAGAAG...TTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp ATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGGTTCTTAGATGCCTCTaGATTATCTCGAAACTTCTG +
Preference number: 4 (lower is better)
Translates to: MAEGFQLLTITSRKRILRVLRCL*IISKLL
Trigger: CAGAAGTTTCGAGATAATCCAGAGGCATCTAAGAAC...CCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp TTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAGTTCTTAGATGCCTCTaGATTATCTCGAAACTTCTG +
Preference number: 4 (lower is better)
Translates to: LFQGMAEGFQLLTITSRKVLRCL*IISKLL
Trigger: CAGAAGTTTCGAGATAATCCAGAGGCATCTAAGAAC...TTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTACCAGCTGCTGCAATCTaGCATGCATCATTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLPAAAI*HASFLF
Trigger: GAACAGGAATGATGCATGCCAGATTGCAGCAGCTGG...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000652315.1
CDS-3UTR CCA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAGCTTCAAGTAATGACTaGTGCAGAACATCTGCGTCC +
Preference number: 4 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKASSND*CRTSAS
Trigger: GGACGCAGATGTTCTGCACCAGTCATTACTTGAAGC...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAGAGGATTATGTCCATaGTCGGCCAGGAGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFRGLCP*SARSWF
Trigger: GAACCAGCTCCTGGCCGACCATGGACATAATCCTCT...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGAGAGGATTATGTCCATaGTCGGCCAGGAGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLRGLCP*SARSWF
Trigger: GAACCAGCTCCTGGCCGACCATGGACATAATCCTCT...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTATCGCCATTTTTGACATaGATCCTGGCCATGCTGTCG +
Preference number: 4 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLSPFLT*ILAMLS
Trigger: CGACAGCATGGCCAGGATCCATGTCAAAAATGGCGA...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GTCTTTTTAATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCTCCTCGTCGATGTTTaGGGTAATGACCCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: VFLIQMWYRMFNYSRAVILLVDV*GNDPEG
Trigger: GCCTTCAGGGTCATTACCCCAAACATCGACGAGGAG...AATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTATTAAAAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAAACATCCTCGTTGAAATaGACATCCTGCATCCCCACG +
Preference number: 4 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKTSSLK*TSCIPT
Trigger: CGTGGGGATGCAGGATGTCCATTTCAACGAGGATGT...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTAAGCGTGTCATACAGATaGGCCAGCCTCTCAAAATCC +
Preference number: 4 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLSVSYR*ASLSKS
Trigger: GGATTTTGAGAGGCTGGCCCATCTGTATGACACGCT...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCGGAAGGAAAGGAAACTaGCTTCCCAGGCACAAGTGG +
Preference number: 4 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFGRKGN*LPRHKW
Trigger: CCACTTGTGCCTGGGAAGCCAGTTTCCTTTCCTTCC...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000442173.5
ENST00000630992.2
CDS-3UTR TCA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAAGATCCATCGCCAAGTTaGATCAGGTGGAAAAATCGT +
Preference number: 4 (lower is better)
Translates to: SSSRVSTTPLLRHNENFEDPSPS*IRWKNR
Trigger: ACGATTTTTCCACCTGATTCAACTTGGCGATGGATC...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp CCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAAGATCCATCGCCAAGTTaGATCAGGTGGAAAAATCGT +
Preference number: 4 (lower is better)
Translates to: PGSLVQKLQWSVPLGHQKDPSPS*IRWKNR
Trigger: ACGATTTTTCCACCTGATTCAACTTGGCGATGGATC...TTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAATGTTCATCATCTTCGTaGGAGTCGCCATTTCGCTTT +
Preference number: 4 (lower is better)
Translates to: SSSRVSTTPLLRHNENFECSSSS*ESPFRF
Trigger: AAAGCGAAATGGCGACTCTCACGAAGATGATGAACA...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAATGAGGACAAGTGACTaGAAATATTCCCTGCTTCGG +
Preference number: 4 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKMRTSD*KYSLLR
Trigger: CCGAAGCAGGGAATATTTTCAGTCACTTGTCCTCAT...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAATGAGGACAAGTGACTaGAAATATTCCCTGCTTCGG +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNEMRTSD*KYSLLR
Trigger: CCGAAGCAGGGAATATTTTCAGTCACTTGTCCTCAT...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp CCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAATGTGTGATGCTCCCCTaGAGGACTTTTTCAATTCTG +
Preference number: 4 (lower is better)
Translates to: PGSLVQKLQWSVPLGHQKCVMLP*RTFSIL
Trigger: CAGAATTGAAAAAGTCCTTCAGGGGAGCATCACACA...TTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCCCTCCACTTCAAACGTaGTGGGAGTTTTACTGCAGG +
Preference number: 4 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFPPLQT*WEFYCR
Trigger: CCTGCAGTAAAACTCCCATCACGTTTGAAGTGGAGG...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp ATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGCCTCATCTGAATCTTTaGATTCAATGCAAATCGCAA +
Preference number: 4 (lower is better)
Translates to: MAEGFQLLTITSRKRILRPHLNL*IQCKSQ
Trigger: TTGCGATTTGCATTGAATTCAAAGATTCAGATGAGG...CCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAAATGCACTTAAGGGGCTaGGAGTCTTCCTCATCTGAA +
Preference number: 4 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKMHLRG*ESSSSE
Trigger: TTCAGATGAGGAAGACTCTCAGCCCCTTAAGTGCAT...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000652315.1
CDS-3UTR TCA 90 bp ATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGTTCTCTATCAAATGCTaGGCCATAGATTTGATCAGT +
Preference number: 4 (lower is better)
Translates to: MAEGFQLLTITSRKRILRFSIKC*AIDLIS
Trigger: ACTGATCAAATCTATGGCTCAGCATTTGATAGAGAA...CCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAATTATCTCGAAACTTCTaGGTGATGTGTGGCATCAGC +
Preference number: 4 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKLSRNF*VMCGIS
Trigger: GCTGATGCCACACATCACTCAGAAGTTTCGAGATAA...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp ACTAAATCTCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTTTATCTCGAAACTTCTaGGTGATGTGTGGCATCAGC +
Preference number: 4 (lower is better)
Translates to: TKSPGSLVQKLQWSVPLGLSRNF*VMCGIS
Trigger: GCTGATGCCACACATCACTCAGAAGTTTCGAGATAA...ACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGAGATTTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp ACTAAATCTCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTTGCCTGATGGCTCCTTaGAGCATATCTGTCATCAAA +
Preference number: 4 (lower is better)
Translates to: TKSPGSLVQKLQWSVPLGCLMAP*SISVIK
Trigger: TTTGATGACAGATATGCTTCAAGGAGCCATCAGGCA...ACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGAGATTTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAATGCCTGATGGCTCCTTaGAGCATATCTGTCATCAAA +
Preference number: 4 (lower is better)
Translates to: SSSRVSTTPLLRHNENFECLMAP*SISVIK
Trigger: TTTGATGACAGATATGCTTCAAGGAGCCATCAGGCA...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGGTGGCTATCCTTGCCTaGTGGCTCCTTGAAGCATAT +
Preference number: 4 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLVAILA*WLLEAY
Trigger: ATATGCTTCAAGGAGCCATCAGGCAAGGATAGCCAC...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAACCGAATCTGTGCTTATaGGAGATCCTCTCGAATCAG +
Preference number: 4 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKPNLCL*EILSNQ
Trigger: CTGATTCGAGAGGATCTCTCATAAGCACAGATTCGG...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAATGGAGTTACAGCACTTaGGAATCTCGTAACACAGAG +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNEWSYST*ESRNTE
Trigger: CTCTGTGTTACGAGATTCTCAAGTGCTGTAACTCCA...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAATGGAGTTACAGCACTTaGGAATCTCGTAACACAGAG +
Preference number: 4 (lower is better)
Translates to: SSSRVSTTPLLRHNENFEWSYST*ESRNTE
Trigger: CTCTGTGTTACGAGATTCTCAAGTGCTGTAACTCCA...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GTCTTTTTAATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTAGAGATCGCCATTTTTaGCATGGATCCTGGCCATGC +
Preference number: 4 (lower is better)
Translates to: VFLIQMWYRMFNYSRAVIRDRHF*HGSWPC
Trigger: GCATGGCCAGGATCCATGTCAAAAATGGCGATCTCT...AATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTATTAAAAAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GTCTTTTTAATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTGCACATTGCTGCCTCTaGGAGATCGCCATTTTTGAC +
Preference number: 4 (lower is better)
Translates to: VFLIQMWYRMFNYSRAVIAHCCL*EIAIFD
Trigger: GTCAAAAATGGCGATCTCTCAGAGGCAGCAATGTGC...AATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTATTAAAAAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGCTGCTTCTTTCCGTGTaGGATATTCTGCCACTAGGG +
Preference number: 4 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLLLLSV*DILPLG
Trigger: CCCTAGTGGCAGAATATCTCACACGGAAAGAAGCAG...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000652315.1
CDS-3UTR TCA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAATTTCCGACAGCGGTGTaGGTTTGGGTTCCTTGTAAA +
Preference number: 4 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKFPTAV*VWVPCK
Trigger: TTTACAAGGAACCCAAACTCACACCGCTGTCGGAAA...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp ACTAAATCTCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTAGTTTAAGGAGTCTCTaGGAAATTTCCGACAGCGGT +
Preference number: 4 (lower is better)
Translates to: TKSPGSLVQKLQWSVPLGSLRSL*EISDSG
Trigger: ACCGCTGTCGGAAATTTCTCAGAGACTCCTTAAACT...ACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGAGATTTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTATTTACCGCTAAGGCTTaGCCGCAAGCTTCCACAAAT +
Preference number: 4 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLFTAKA*PQASTN
Trigger: ATTTGTGGAAGCTTGCGGTCAAGCCTTAGCGGTAAA...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAAGCTTTCATTTCTTCCTaGTACTCGAGCTGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: SSSRVSTTPLLRHNENFEAFISS*YSSWSS
Trigger: AGAAGACCAGCTCGAGTATCAGGAAGAAATGAAAGC...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp CCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAAGCTTTCATTTCTTCCTaGTACTCGAGCTGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: PGSLVQKLQWSVPLGHQKAFISS*YSSWSS
Trigger: AGAAGACCAGCTCGAGTATCAGGAAGAAATGAAAGC...TTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAGATCTGCTCATGCATaGTTTCAGAAAGCTCCTTCG +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNERSAHA*FQKAPS
Trigger: CGAAGGAGCTTTCTGAAATCATGCATGAGCAGATCT...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400228.6
ENST00000448493.7
ENST00000630992.2
CDS-3UTR GCA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTAGATTTCTGCTTCTCTTaGACTCTTGGCAAGTTCCGG +
Preference number: 4 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLDFCFS*TLGKFR
Trigger: CCGGAACTTGCCAAGAGTGCAAGAGAAGCAGAAATC...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp ATTAGAATCTTGATTTGTGTCACGTGTTTTTCTCTCAGAGGTGGCCGCTCTTCTTTTCAGTTTGATTTCTaGTTCTCTTGCACTCTTGGC +
Preference number: 4 (lower is better)
Translates to: IRILICVTCFSLRGGRSSFQFDF*FSCTLG
Trigger: GCCAAGAGTGCAAGAGAAGCAGAAATCAAACTGAAA...AGAAGAGCGGCCACCTCTGAGAGAAAAACACGTGACACAAATCAAGATTCTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR GCA 90 bp GTCTTTTTAATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTGTGGTGGCGAGCATTTaGCTCACTGAGAAATGGTTC +
Preference number: 4 (lower is better)
Translates to: VFLIQMWYRMFNYSRAVIVVASI*LTEKWF
Trigger: GAACCATTTCTCAGTGAGGCAAATGCTCGCCACCAC...AATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTATTAAAAAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAAACTGAAAATATTCCCTaGTTCGGATACTGCATGGCG +
Preference number: 4 (lower is better)
Translates to: SSSRVSTTPLLRHNENFETENIP*FGYCMA
Trigger: CGCCATGCAGTATCCGAAGCAGGGAATATTTTCAGT...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GTCTTTTTAATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTAGTCTTTGGCATGCCTaGTTGGCATTCTTCAGCACC +
Preference number: 4 (lower is better)
Translates to: VFLIQMWYRMFNYSRAVISLWHA*LAFFST
Trigger: GGTGCTGAAGAATGCCAAGCAGGCATGCCAAAGACT...AATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTATTAAAAAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp AATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACACGGTCAAGATTTCCAGATaGATCCTTAAACAATGTCCT +
Preference number: 4 (lower is better)
Translates to: NTQESNLDFKVLPHKCDTVKISR*ILKQCP
Trigger: AGGACATTGTTTAAGGATGCATCTGGAAATCTTGAC...CGTGTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAAGAGTGTGTTTTGGTATaGAGGGCACAAATTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SSSRVSTTPLLRHNENFEECVLV*RAQIPP
Trigger: TGGAGGAATTTGTGCCCTGCATACCAAAACACACTC...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAATGGCCTTCCATCGCATaGAGACTCTTAAGGTACTTT +
Preference number: 4 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKWPSIA*RLLRYF
Trigger: AAAGTACCTTAAGAGTCTGCATGCGATGGAAGGCCA...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAATACAACGGTTTCCACTaGATGATGATAGGATGCAGG +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNEYNGFH*MMIGCR
Trigger: CCTGCATCCTATCATCATGCAGTGGAAACCGTTGTA...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp AAGAATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACATTCGCGTTCTTAGATaGCTCTGGATTATCTCGAAA +
Preference number: 4 (lower is better)
Translates to: KNTQESNLDFKVLPHKCDIRVLR*LWIISK
Trigger: TTTCGAGATAATCCAGAGGCATCTAAGAACGCGAAT...GTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp CAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATATATAATGTTCATGGTTaGACACTACACGGAGAAATT +
Preference number: 4 (lower is better)
Translates to: QGMAEGFQLLTITSRKRIYNVHG*TLHGEI
Trigger: AATTTCTCCGTGTAGTGTGCAACCATGAACATTATA...TATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTAATCTGGTTCCCCCAATaGCAACAACGTCTGCTATCA +
Preference number: 4 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLIWFPQ*QQRLLS
Trigger: TGATAGCAGACGTTGTTGGCATTGGGGGAACCAGAT...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAATGGCCATTAGCACCGTaGGTATCCTTTTGGTTAAGT +
Preference number: 4 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKWPLAP*VSFWLS
Trigger: ACTTAACCAAAAGGATACGCACGGTGCTAATGGCCA...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAATGGCCATTAGCACCGTaGGTATCCTTTTGGTTAAGT +
Preference number: 4 (lower is better)
Translates to: SSSRVSTTPLLRHNENFEWPLAP*VSFWLS
Trigger: ACTTAACCAAAAGGATACGCACGGTGCTAATGGCCA...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp CCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAATGGCCATTAGCACCGTaGGTATCCTTTTGGTTAAGT +
Preference number: 4 (lower is better)
Translates to: PGSLVQKLQWSVPLGHQKWPLAP*VSFWLS
Trigger: ACTTAACCAAAAGGATACGCACGGTGCTAATGGCCA...TTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAATGCTGCAATCTGGCATaGATCATTCCTGTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKCCNLA*IIPVLA
Trigger: AGCCAGAACAGGAATGATGCATGCCAGATTGCAGCA...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000652315.1
CDS-3UTR GCA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCTGCCTCTTCCCGGTCTaGGTAAATGGCATCTCAAAC +
Preference number: 4 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFCLFPV*VNGISN
Trigger: GTTTGAGATGCCATTTACGCAGACCGGGAAGAGGCA...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAACTTCTCACCTGCTCATaGATGATTTCAGAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNELLTCS*MISESS
Trigger: GGAGCTTTCTGAAATCATGCATGAGCAGGTGAGAAG...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442173.5
CDS-3UTR CCA 90 bp CAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATATTCATAGACATGAACTaGAAGTTTATCCAACTTGAC +
Preference number: 4 (lower is better)
Translates to: QGMAEGFQLLTITSRKRIFIDMN*KFIQLD
Trigger: GTCAAGTTGGATAAACTTCCAGTTCATGTCTATGAA...TATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp TTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGATTCATAGACATGAACTaGAAGTTTATCCAACTTGAC +
Preference number: 4 (lower is better)
Translates to: FQGMAEGFQLLTITSRKRFIDMN*KFIQLD
Trigger: GTCAAGTTGGATAAACTTCCAGTTCATGTCTATGAA...TCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACTTCATAGACATGAACTaGAAGTTTATCCAACTTGAC +
Preference number: 4 (lower is better)
Translates to: VIGFGKHPEFANDKASPHFIDMN*KFIQLD
Trigger: GTCAAGTTGGATAAACTTCCAGTTCATGTCTATGAA...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAGCTTCAAAGTTGAGCTaGAGGATCTTATTTAGAATT +
Preference number: 4 (lower is better)
Translates to: FQGMAEGFQLLTITSRKRASKLS*RILFRI
Trigger: AATTCTAAATAAGATCCTCCAGCTCAACTTTGAAGC...TCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAATGGTTCAGGTCTACGTaGAAATCGGCAGAAATCTTC +
Preference number: 4 (lower is better)
Translates to: SSSRVSTTPLLRHNENFEWFRST*KSAEIF
Trigger: GAAGATTTCTGCCGATTTCCACGTAGACCTGAACCA...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTATTTGGCATGCCTGCTTaGCATTCTTCAGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLFGMPA*HSSAPS
Trigger: AGAAGGTGCTGAAGAATGCCAAGCAGGCATGCCAAA...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGATGGCAGAAAATCTaGCATTTTTGTCAAGATTTC +
Preference number: 4 (lower is better)
Translates to: GMAEGFQLLTITSRKRILRWQKI*HFCQDF
Trigger: GAAATCTTGACAAAAATGCCAGATTTTCTGCCATCT...GAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp AAGAATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACTGTCTTGCCTGTAGATaGCAGAAAATCTGGCATTTT +
Preference number: 4 (lower is better)
Translates to: KNTQESNLDFKVLPHKCDCLACR*QKIWHF
Trigger: AAAATGCCAGATTTTCTGCCATCTACAGGCAAGACA...GTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp CCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAAAGGCTGAGTGTGTTTTaGTATGCAGGGCACAAATTC +
Preference number: 4 (lower is better)
Translates to: PGSLVQKLQWSVPLGHQKRLSVF*YAGHKF
Trigger: GAATTTGTGCCCTGCATACCAAAACACACTCAGCCT...TTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAGGCTGAGTGTGTTTTaGTATGCAGGGCACAAATTC +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNERLSVF*YAGHKF
Trigger: GAATTTGTGCCCTGCATACCAAAACACACTCAGCCT...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp CCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAATTCAGAGGCAACATATaGCTCAGCCTTATACGCGTA +
Preference number: 4 (lower is better)
Translates to: PGSLVQKLQWSVPLGHQKFRGNI*LSLIRV
Trigger: TACGCGTATAAGGCTGAGCCATATGTTGCCTCTGAA...TTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAATCGTGGTCATGGATTTaGTCAGTTCTTCATGCACTG +
Preference number: 4 (lower is better)
Translates to: SSSRVSTTPLLRHNENFESWSWI*SVLHAL
Trigger: CAGTGCATGAAGAACTGACCAAATCCATGACCACGA...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp ACTAAATCTCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTTCGTGGTCATGGATTTaGTCAGTTCTTCATGCACTG +
Preference number: 4 (lower is better)
Translates to: TKSPGSLVQKLQWSVPLGSWSWI*SVLHAL
Trigger: CAGTGCATGAAGAACTGACCAAATCCATGACCACGA...ACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGAGATTTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TCTCTGGTTTCGCAGCAACTTAACTTTGGAGTTCTCTATCAAATGCTGAGCCATGTTCTTAGATGCCTCTaGATTATCTCGAAACTTCTG +
Preference number: 4 (lower is better)
Translates to: SLVSQQLNFGVLYQMLSHVLRCL*IISKLL
Trigger: CAGAAGTTTCGAGATAATCCAGAGGCATCTAAGAAC...ATGGCTCAGCATTTGATAGAGAACTCCAAAGTTAAGTTGCTGCGAAACCAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp ACTAAATCTCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCTCACTATTCCTTTCTaGAAGGCTGTTACCCGAATC +
Preference number: 4 (lower is better)
Translates to: TKSPGSLVQKLQWSVPLGLTIPF*KAVTRI
Trigger: GATTCGGGTAACAGCCTTCCAGAAAGGAATAGTGAG...ACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGAGATTTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GTCTTTTTAATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGCTGCTGCAATCTaGCATGCATCATTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: VFLIQMWYRMFNYSRAVIPAAAI*HASFLF
Trigger: GAACAGGAATGATGCATGCCAGATTGCAGCAGCTGG...AATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTATTAAAAAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000652315.1
CDS-3UTR CCA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCTGGTCGGCCAGGAGCTaGTTCTTAAACGCCAATGTA +
Preference number: 4 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFWSARS*FLNANV
Trigger: TACATTGGCGTTTAAGAACCAGCTCCTGGCCGACCA...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp ACTAAATCTCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTACGTCTGCTATCAGCTaGCTGACAGATATGATGACT +
Preference number: 4 (lower is better)
Translates to: TKSPGSLVQKLQWSVPLGTSAIS*LTDMMT
Trigger: AGTCATCATATCTGTCAGCCAGCTGATAGCAGACGT...ACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGAGATTTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAACGTCTGCTATCAGCTaGCTGACAGATATGATGACT +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNETSAIS*LTDMMT
Trigger: AGTCATCATATCTGTCAGCCAGCTGATAGCAGACGT...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGTCGCCATTTTTGACATaGATCCTGGCCATGCTGTCG +
Preference number: 4 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLSPFLT*ILAMLS
Trigger: CGACAGCATGGCCAGGATCCATGTCAAAAATGGCGA...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAAAAGCGGCGGATGTTGTaGGATCTCTCAAACTCTGTT +
Preference number: 4 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKKRRML*DLSNSV
Trigger: AACAGAGTTTGAGAGATCCCACAACATCCGCCGCTT...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAAAACCATTGTGCTTGTTaGAGTCCCACTGATGGCGTT +
Preference number: 4 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKNHCAC*SPTDGV
Trigger: AACGCCATCAGTGGGACTCCAACAAGCACAATGGTT...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACCATACTCCACCATTTTaGCAAAAGGATGAAATTCTT +
Preference number: 4 (lower is better)
Translates to: VIGFGKHPEFANDKASPHHTPPF*QKDEIL
Trigger: AAGAATTTCATCCTTTTGCCAAAATGGTGGAGTATG...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTAATCCCCTACATGAAATaGCGTATTACCACCACCACC +
Preference number: 4 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLIPYMK*RITTTT
Trigger: GGTGGTGGTGGTAATACGCCATTTCATGTAGGGGAT...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAGAAGTTTATCCAACTTaGCCACTTTGTTCGGAAGCT +
Preference number: 4 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKEVYPT*PLCSEA
Trigger: AGCTTCCGAACAAAGTGGTCAAGTTGGATAAACTTC...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTAGATCCATCGCCAAGTTaGATCAGGTGGAAAAATCGT +
Preference number: 4 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLDPSPS*IRWKNR
Trigger: ACGATTTTTCCACCTGATTCAACTTGGCGATGGATC...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTATGTTCATCATCTTCGTaGGAGTCGCCATTTCGCTTT +
Preference number: 4 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLCSSSS*ESPFRF
Trigger: AAAGCGAAATGGCGACTCTCACGAAGATGATGAACA...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAAAACTTCTCTTCAAATaGCTTCACTTCTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKKLLFK*LHFWLS
Trigger: GCTGAGCCAGAAGTGAAGTCATTTGAAGAGAAGTTT...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
40% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTAATGAGGACAAGTGACTaGAAATATTCCCTGCTTCGG +
Preference number: 4 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLMRTSD*KYSLLR
Trigger: CCGAAGCAGGGAATATTTTCAGTCACTTGTCCTCAT...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GACAGATATGATGACTTGCAAATGTGTCCGGACAAAGGACTTCTTTCCAGTGTACCTCATCTGAATCTTTaGATTCAATGCAAATCGCAA +
Preference number: 4 (lower is better)
Translates to: DRYDDLQMCPDKGLLSSVPHLNL*IQCKSQ
Trigger: TTGCGATTTGCATTGAATTCAAAGATTCAGATGAGG...TACACTGGAAAGAAGTCCTTTGTCCGGACACATTTGCAAGTCATCATATCTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR TCA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAATGCTTTTCATGCAGCTaGGTGGGCAACTCTATTTTA +
Preference number: 4 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKCFSCS*VGNSIL
Trigger: TAAAATAGAGTTGCCCACTCAGCTGCATGAAAAGCA...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GTCTTTTTAATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTAATCGGCAGAAGGCTTaGGAATCGTGGTCATGGATT +
Preference number: 4 (lower is better)
Translates to: VFLIQMWYRMFNYSRAVINRQKA*ESWSWI
Trigger: AATCCATGACCACGATTCTCAAGCCTTCTGCCGATT...AATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTATTAAAAAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGAATCGGCAGAAGGCTTaGGAATCGTGGTCATGGATT +
Preference number: 4 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLNRQKA*ESWSWI
Trigger: AATCCATGACCACGATTCTCAAGCCTTCTGCCGATT...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp AAGAATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACTTCTCTATCAAATGCTaGGCCATAGATTTGATCAGT +
Preference number: 4 (lower is better)
Translates to: KNTQESNLDFKVLPHKCDFSIKC*AIDLIS
Trigger: ACTGATCAAATCTATGGCTCAGCATTTGATAGAGAA...GTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR TCA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAACTCGAAACTTCTGAGTaGTGTGTGGCATCAGCATAT +
Preference number: 4 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKLETSE*CVASAY
Trigger: ATATGCTGATGCCACACATCACTCAGAAGTTTCGAG...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp CCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAAGTTGATGTTTGGAGTTaGGGTTGTATATGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: PGSLVQKLQWSVPLGHQKVDVWS*GCIWRS
Trigger: GCTTCTCCATATACAACCTCAACTCCAAACATCAAC...TTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAACATTTCTCACACTGTTaGTGTTTGGAGTTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNEHFSHC*CLELRL
Trigger: CAACCTCAACTCCAAACATCAACAGTGTGAGAAATG...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAACATTTCTCACACTGTTaGTGTTTGGAGTTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKHFSHC*CLELRL
Trigger: CAACCTCAACTCCAAACATCAACAGTGTGAGAAATG...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TCTCTGGTTTCGCAGCAACTTAACTTTGGAGTTCTCTATCAAATGCTGAGCCATAAACTCAACAAACGTTaGACAAAAAGCAAACAGCGT +
Preference number: 4 (lower is better)
Translates to: SLVSQQLNFGVLYQMLSHKLNKR*TKSKQR
Trigger: ACGCTGTTTGCTTTTTGTTCAACGTTTGTTGAGTTT...ATGGCTCAGCATTTGATAGAGAACTCCAAAGTTAAGTTGCTGCGAAACCAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR GCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAATTCCACTTCACTGTCTaGTGCCAAGAGATAACTACT +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNEFHFTV*CQEITT
Trigger: AGTAGTTATCTCTTGGCAGCAGACAGTGAAGTGGAA...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAATCGCTTTTCTTGCATTaGAGCTTCAAAGTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNESLFLH*SFKVEL
Trigger: CAGCTCAACTTTGAAGCTGCAATGCAAGAAAAGCGA...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp AAGAATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACCAGAACCTTCCAATTTaGTTTGTTCATCATCTTCGT +
Preference number: 4 (lower is better)
Translates to: KNTQESNLDFKVLPHKCDQNLPI*FVHHLR
Trigger: ACGAAGATGATGAACAAAGCAAATTGGAAGGTTCTG...GTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp GTCTTTTTAATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTGATTTCTGCTTCTCTTaGACTCTTGGCAAGTTCCGG +
Preference number: 4 (lower is better)
Translates to: VFLIQMWYRMFNYSRAVIDFCFS*TLGKFR
Trigger: CCGGAACTTGCCAAGAGTGCAAGAGAAGCAGAAATC...AATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTATTAAAAAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAAAACAATGTCCTTGCTaGCCAAGCAAATGGCATTCT +
Preference number: 4 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKKQCPC*PSKWHS
Trigger: AGAATGCCATTTGCTTGGGCAGCAAGGACATTGTTT...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
40% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAAAAACAATGTCCTTGCTaGCCAAGCAAATGGCATTCT +
Preference number: 4 (lower is better)
Translates to: SSSRVSTTPLLRHNENFEKQCPC*PSKWHS
Trigger: AGAATGCCATTTGCTTGGGCAGCAAGGACATTGTTT...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp ACTAAATCTCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATTGGATAGCTTATTaGTGTCTTGCCTGTAGATGG +
Preference number: 4 (lower is better)
Translates to: TKSPGSLVQKLQWSVPLGHWIAY*CLACRW
Trigger: CCATCTACAGGCAAGACAGCAATAAGCTATCCAATG...ACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGAGATTTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAACATTGGATAGCTTATTaGTGTCTTGCCTGTAGATGG +
Preference number: 4 (lower is better)
Translates to: SSSRVSTTPLLRHNENFEHWIAY*CLACRW
Trigger: CCATCTACAGGCAAGACAGCAATAAGCTATCCAATG...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAATGGCCTTCCATCGCATaGAGACTCTTAAGGTACTTT +
Preference number: 4 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKWPSIA*RLLRYF
Trigger: AAAGTACCTTAAGAGTCTGCATGCGATGGAAGGCCA...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCGGGCAGATCTGCTCATaGATGATTTCAGAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFGQICS*MISESS
Trigger: GGAGCTTTCTGAAATCATGCATGAGCAGATCTGCCC...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000400228.6
ENST00000448493.7
ENST00000630992.2
CDS-3UTR CCA 90 bp TTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAGCTTCAAAGTTGAGCTaGAGGATCTTATTTAGAATT +
Preference number: 4 (lower is better)
Translates to: LFQGMAEGFQLLTITSRKASKLS*RILFRI
Trigger: AATTCTAAATAAGATCCTCCAGCTCAACTTTGAAGC...TTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CCA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGTACTGTCCTAGTCTTTaGCATGCCTGCTTGGCATTC +
Preference number: 4 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLYCPSL*HACLAF
Trigger: GAATGCCAAGCAGGCATGCCAAAGACTAGGACAGTA...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCTACTGTCCTAGTCTTTaGCATGCCTGCTTGGCATTC +
Preference number: 4 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFYCPSL*HACLAF
Trigger: GAATGCCAAGCAGGCATGCCAAAGACTAGGACAGTA...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp ATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACAAGATGGCAGAAAATCTaGCATTTTTGTCAAGATTTC +
Preference number: 4 (lower is better)
Translates to: IGFGKHPEFANDKASPHTRWQKI*HFCQDF
Trigger: GAAATCTTGACAAAAATGCCAGATTTTCTGCCATCT...TGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GTCTTTTTAATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTTCGTTTCCTAAGGCTTaGGCTCCAGATTCGGTTTTC +
Preference number: 4 (lower is better)
Translates to: VFLIQMWYRMFNYSRAVISFPKA*APDSVF
Trigger: GAAAACCGAATCTGGAGCCCAAGCCTTAGGAAACGA...AATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTATTAAAAAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAGATGCAGGAAATCTCTaGTTTCGCAGCAACTTAACT +
Preference number: 4 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKDAGNL*FRSNLT
Trigger: AGTTAAGTTGCTGCGAAACCAGAGATTTCCTGCATC...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTACTCACTATTCCTTTCTaGAAGGCTGTTACCCGAATC +
Preference number: 4 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLLTIPF*KAVTRI
Trigger: GATTCGGGTAACAGCCTTCCAGAAAGGAATAGTGAG...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTACCGTGCGTATCCTTTTaGTTAAGTCCTTCACATCAG +
Preference number: 4 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLPCVSF*LSPSHQ
Trigger: CTGATGTGAAGGACTTAACCAAAAGGATACGCACGG...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GTCTTTTTAATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTAACCATTGTGCTTGTTaGAGTCCCACTGATGGCGTT +
Preference number: 4 (lower is better)
Translates to: VFLIQMWYRMFNYSRAVINHCAC*SPTDGV
Trigger: AACGCCATCAGTGGGACTCCAACAAGCACAATGGTT...AATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTATTAAAAAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp AATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACACGCATACTCCACCATTTTaGCAAAAGGATGAAATTCTT +
Preference number: 4 (lower is better)
Translates to: NTQESNLDFKVLPHKCDTHTPPF*QKDEIL
Trigger: AAGAATTTCATCCTTTTGCCAAAATGGTGGAGTATG...CGTGTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp ATTCCAAGCACACTTGATATCTTTCTCACACTGGCTATGTATCGCTTCCCCATGAACCAGGTTAAGGACTaGTATTATTATTGCAGGATA +
Preference number: 4 (lower is better)
Translates to: IPSTLDIFLTLAMYRFPMNQVKD*YYYCRI
Trigger: TATCCTGCAATAATAATACCAGTCCTTAACCTGGTT...CATGGGGAAGCGATACATAGCCAGTGTGAGAAAGATATCAAGTGTGCTTGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp CCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAATTGCAGCTTCAAAGTTaGGCTGGAGGATCTTATTTA +
Preference number: 4 (lower is better)
Translates to: PGSLVQKLQWSVPLGHQKLQLQS*AGGSYL
Trigger: TAAATAAGATCCTCCAGCTCAACTTTGAAGCTGCAA...TTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp ACTAAATCTCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTTTGCAGCTTCAAAGTTaGGCTGGAGGATCTTATTTA +
Preference number: 4 (lower is better)
Translates to: TKSPGSLVQKLQWSVPLGLQLQS*AGGSYL
Trigger: TAAATAAGATCCTCCAGCTCAACTTTGAAGCTGCAA...ACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGAGATTTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTAAAACTTCTCTTCAAATaGCTTCACTTCTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLKLLFK*LHFWLS
Trigger: GCTGAGCCAGAAGTGAAGTCATTTGAAGAGAAGTTT...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAATGCTTTTCATGCAGCTaGGTGGGCAACTCTATTTTA +
Preference number: 4 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKCFSCS*VGNSIL
Trigger: TAAAATAGAGTTGCCCACTCAGCTGCATGAAAAGCA...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGCTCGAAACTTCTGAGTaGTGTGTGGCATCAGCATAT +
Preference number: 4 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLLETSE*CVASAY
Trigger: ATATGCTGATGCCACACATCACTCAGAAGTTTCGAG...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCCTCGAAACTTCTGAGTaGTGTGTGGCATCAGCATAT +
Preference number: 4 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFLETSE*CVASAY
Trigger: ATATGCTGATGCCACACATCACTCAGAAGTTTCGAG...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAAGTTGATGTTTGGAGTTaGGGTTGTATATGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKVDVWS*GCIWRS
Trigger: GCTTCTCCATATACAACCTCAACTCCAAACATCAAC...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GTCTTTTTAATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTTGGAGTTACAGCACTTaGGAATCTCGTAACACAGAG +
Preference number: 4 (lower is better)
Translates to: VFLIQMWYRMFNYSRAVIWSYST*ESRNTE
Trigger: CTCTGTGTTACGAGATTCTCAAGTGCTGTAACTCCA...AATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTATTAAAAAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAACCATTTCGCTTTTCTTaGATTGCAGCTTCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNEPFRFS*IAASKL
Trigger: CAACTTTGAAGCTGCAATGCAAGAAAAGCGAAATGG...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGACTGAAAATATTCCCTaGTTCGGATACTGCATGGCG +
Preference number: 4 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLTENIP*FGYCMA
Trigger: CGCCATGCAGTATCCGAAGCAGGGAATATTTTCAGT...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAACTTAAACAATGTCCTTaGTGCCCAAGCAAATGGCAT +
Preference number: 4 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKLKQCP*CPSKWH
Trigger: ATGCCATTTGCTTGGGCAGCAAGGACATTGTTTAAG...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GTCTTTTTAATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTTGGCCTTCCATCGCATaGAGACTCTTAAGGTACTTT +
Preference number: 4 (lower is better)
Translates to: VFLIQMWYRMFNYSRAVIWPSIA*RLLRYF
Trigger: AAAGTACCTTAAGAGTCTGCATGCGATGGAAGGCCA...AATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTATTAAAAAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAATTCGCGTTCTTAGATaGCTCTGGATTATCTCGAAA +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNEIRVLR*LWIISK
Trigger: TTTCGAGATAATCCAGAGGCATCTAAGAACGCGAAT...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGAAATATAATGTTCATGGTTaGACACTACACGGAGAAATT +
Preference number: 4 (lower is better)
Translates to: AEGFQLLTITSRKRILRKYNVHG*TLHGEI
Trigger: AATTTCTCCGTGTAGTGTGCAACCATGAACATTATA...TTTCCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR GCA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAACGGAATTTCCCAATGTaGTACTTTGTTGGTGCTTAT +
Preference number: 4 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKRNFPM*YFVGAY
Trigger: ATAAGCACCAACAAAGTAGCACATTGGGAAATTCCG...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAACGGAATTTCCCAATGTaGTACTTTGTTGGTGCTTAT +
Preference number: 4 (lower is better)
Translates to: SSSRVSTTPLLRHNENFERNFPM*YFVGAY
Trigger: ATAAGCACCAACAAAGTAGCACATTGGGAAATTCCG...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAACGGAATTTCCCAATGTaGTACTTTGTTGGTGCTTAT +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNERNFPM*YFVGAY
Trigger: ATAAGCACCAACAAAGTAGCACATTGGGAAATTCCG...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTAATGTACTGGAACTGGTaGAGGCAGACTTCAGATATT +
Preference number: 4 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLMYWNW*RQTSDI
Trigger: AATATCTGAAGTCTGCCTGCACCAGTTCCAGTACAT...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACAGATATGATGACTTaGAAATGTGTCCGGACAAAG +
Preference number: 4 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKTDMMT*KCVRTK
Trigger: CTTTGTCCGGACACATTTGCAAGTCATCATATCTGT...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAAACAGATATGATGACTTaGAAATGTGTCCGGACAAAG +
Preference number: 4 (lower is better)
Translates to: SSSRVSTTPLLRHNENFETDMMT*KCVRTK
Trigger: CTTTGTCCGGACACATTTGCAAGTCATCATATCTGT...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GTCTTTTTAATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTTGGCCATTAGCACCGTaGGTATCCTTTTGGTTAAGT +
Preference number: 4 (lower is better)
Translates to: VFLIQMWYRMFNYSRAVIWPLAP*VSFWLS
Trigger: ACTTAACCAAAAGGATACGCACGGTGCTAATGGCCA...AATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTATTAAAAAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp ACTAAATCTCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTAGTCACCTGGATGTATaGATACTTAGAATCCAGATC +
Preference number: 4 (lower is better)
Translates to: TKSPGSLVQKLQWSVPLGSHLDV*ILRIQI
Trigger: GATCTGGATTCTAAGTATGCATACATCCAGGTGACT...ACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGAGATTTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp CCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAAAGTCACCTGGATGTATaGATACTTAGAATCCAGATC +
Preference number: 4 (lower is better)
Translates to: PGSLVQKLQWSVPLGHQKSHLDV*ILRIQI
Trigger: GATCTGGATTCTAAGTATGCATACATCCAGGTGACT...TTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAGTCACCTGGATGTATaGATACTTAGAATCCAGATC +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNESHLDV*ILRIQI
Trigger: GATCTGGATTCTAAGTATGCATACATCCAGGTGACT...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAACAAGCTTCCACAAATTaGCTGAAAACTTCCTTAAGC +
Preference number: 4 (lower is better)
Translates to: SSSRVSTTPLLRHNENFEQASTN*LKTSLS
Trigger: GCTTAAGGAAGTTTTCAGGCAATTTGTGGAAGCTTG...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp AAGAATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACTCGCTAAAGACTAAATaGATACCTGTTTCAGAATGT +
Preference number: 4 (lower is better)
Translates to: KNTQESNLDFKVLPHKCDSLKTK*IPVSEC
Trigger: ACATTCTGAAACAGGTATGCATTTAGTCTTTAGCGA...GTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp GACAGATATGATGACTTGCAAATGTGTCCGGACAAAGGACTTCTTTCCAGTGTAGCTTCAAAGTTGAGCTaGAGGATCTTATTTAGAATT +
Preference number: 4 (lower is better)
Translates to: DRYDDLQMCPDKGLLSSVASKLS*RILFRI
Trigger: AATTCTAAATAAGATCCTCCAGCTCAACTTTGAAGC...TACACTGGAAAGAAGTCCTTTGTCCGGACACATTTGCAAGTCATCATATCTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CCA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCTGGTTCAGGTCTACGTaGAAATCGGCAGAAATCTTC +
Preference number: 4 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFWFRST*KSAEIF
Trigger: GAAGATTTCTGCCGATTTCCACGTAGACCTGAACCA...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCTGCCTCACTGAGAAATaGTTCAGGTCTACGTGGAAA +
Preference number: 4 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFCLTEK*FRSTWK
Trigger: TTTCCACGTAGACCTGAACCATTTCTCAGTGAGGCA...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp CCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAATGTCTTGCCTGTAGATaGCAGAAAATCTGGCATTTT +
Preference number: 4 (lower is better)
Translates to: PGSLVQKLQWSVPLGHQKCLACR*QKIWHF
Trigger: AAAATGCCAGATTTTCTGCCATCTACAGGCAAGACA...TTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAATGTCTTGCCTGTAGATaGCAGAAAATCTGGCATTTT +
Preference number: 4 (lower is better)
Translates to: SSSRVSTTPLLRHNENFECLACR*QKIWHF
Trigger: AAAATGCCAGATTTTCTGCCATCTACAGGCAAGACA...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCTTCAGAGGCAACATATaGCTCAGCCTTATACGCGTA +
Preference number: 4 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFFRGNI*LSLIRV
Trigger: TACGCGTATAAGGCTGAGCCATATGTTGCCTCTGAA...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAAGATGCAGGAAATCTCTaGTTTCGCAGCAACTTAACT +
Preference number: 4 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKDAGNL*FRSNLT
Trigger: AGTTAAGTTGCTGCGAAACCAGAGATTTCCTGCATC...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp ACTAAATCTCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTGTTCTTAGATGCCTCTaGATTATCTCGAAACTTCTG +
Preference number: 4 (lower is better)
Translates to: TKSPGSLVQKLQWSVPLGVLRCL*IISKLL
Trigger: CAGAAGTTTCGAGATAATCCAGAGGCATCTAAGAAC...ACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGAGATTTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGTTCAAAGAGGGTCTTTaGGTCTCCAGGAGCAAAACA +
Preference number: 4 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLFKEGL*VSRSKT
Trigger: TGTTTTGCTCCTGGAGACCCAAAGACCCTCTTTGAA...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCCTCACTATTCCTTTCTaGAAGGCTGTTACCCGAATC +
Preference number: 4 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFLTIPF*KAVTRI
Trigger: GATTCGGGTAACAGCCTTCCAGAAAGGAATAGTGAG...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAATGTGCTACTTTGTTaGTGCTTATCCAGGGAATTG +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNENVLLC*CLSREL
Trigger: CAATTCCCTGGATAAGCACCAACAAAGTAGCACATT...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGACGTCTGCTATCAGCTaGCTGACAGATATGATGACT +
Preference number: 4 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLTSAIS*LTDMMT
Trigger: AGTCATCATATCTGTCAGCCAGCTGATAGCAGACGT...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCTCACTGTCTGTAAACTaGTATTGCTGCCCGAAGAAG +
Preference number: 4 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFSLSVN*YCCPKK
Trigger: CTTCTTCGGGCAGCAATACCAGTTTACAGACAGTGA...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000400228.6
CDS-3UTR CCA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAAGATGAGGCTTCCCTaGAAGGTACTCCTAAAAGAG +
Preference number: 4 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFKMRLP*KVLLKE
Trigger: CTCTTTTAGGAGTACCTTCCAGGGAAGCCTCATCTT...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCATGAGCCACCGTGCCTaGTCAGTCTTTAACTCTTTA +
Preference number: 4 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFMSHRA*SVFNSL
Trigger: TAAAGAGTTAAAGACTGACCAGGCACGGTGGCTCAT...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAACACTTCACAACAGGCTaGTTGTTTTCAGATCTCAGT +
Preference number: 4 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKHFTTG*LFSDLS
Trigger: ACTGAGATCTGAAAACAACCAGCCTGTTGTGAAGTG...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp ACTAAATCTCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTTTTCTGTTAGGAAGTTaGCTCAAGAGTTGCATTCCA +
Preference number: 4 (lower is better)
Translates to: TKSPGSLVQKLQWSVPLGFLLGS*LKSCIP
Trigger: TGGAATGCAACTCTTGAGCCAACTTCCTAACAGAAA...ACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGAGATTTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR CAA 72 bp CTTGGTATCTTTGAATCCTGCCTTTTCCAAATGGCATaGGTAAGTTCAACGGAATATAATGTTCATGGTTGC +
Preference number: 4 (lower is better)
Translates to: LGIFESCLFQMA*VSSTEYNVHGC
Trigger: GCAACCATGAACATTATATTCCGTTGAACTTACCAATGCCATTTGGAAAAGGCAGGATTCAAAGATACCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAACCTCATCTGAATCTTTaGATTCAATGCAAATCGCAA +
Preference number: 4 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKPHLNL*IQCKSQ
Trigger: TTGCGATTTGCATTGAATTCAAAGATTCAGATGAGG...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp CCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACCTCATCTGAATCTTTaGATTCAATGCAAATCGCAA +
Preference number: 4 (lower is better)
Translates to: PGSLVQKLQWSVPLGHQKPHLNL*IQCKSQ
Trigger: TTGCGATTTGCATTGAATTCAAAGATTCAGATGAGG...TTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGTGCTTTTCATGCAGCTaGGTGGGCAACTCTATTTTA +
Preference number: 4 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLCFSCS*VGNSIL
Trigger: TAAAATAGAGTTGCCCACTCAGCTGCATGAAAAGCA...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAAAGGTCTTGGTATCTTTaGATCCTGCCTTTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKRSWYL*ILPFPN
Trigger: ATTTGGAAAAGGCAGGATTCAAAGATACCAAGACCT...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAACATAAGTTCAGATGTTaGAGCCTTGTTCCAATATGT +
Preference number: 4 (lower is better)
Translates to: SSSRVSTTPLLRHNENFEHKFRC*SLVPIC
Trigger: ACATATTGGAACAAGGCTTCAACATCTGAACTTATG...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAAAGAACACAGAAGTCATaGAAAAGAACACAGAACTCA +
Preference number: 4 (lower is better)
Translates to: SSSRVSTTPLLRHNENFERTQKS*KRTQNS
Trigger: TGAGTTCTGTGTTCTTTTTCATGACTTCTGTGTTCT...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR GCA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAACCATTTCGCTTTTCTTaGATTGCAGCTTCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKPFRFS*IAASKL
Trigger: CAACTTTGAAGCTGCAATGCAAGAAAAGCGAAATGG...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp ACTAAATCTCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCAGAACCTTCCAATTTaGTTTGTTCATCATCTTCGT +
Preference number: 4 (lower is better)
Translates to: TKSPGSLVQKLQWSVPLGQNLPI*FVHHLR
Trigger: ACGAAGATGATGAACAAAGCAAATTGGAAGGTTCTG...ACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGAGATTTAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAACAGAACCTTCCAATTTaGTTTGTTCATCATCTTCGT +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNEQNLPI*FVHHLR
Trigger: ACGAAGATGATGAACAAAGCAAATTGGAAGGTTCTG...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCCTTAAACAATGTCCTTaGTGCCCAAGCAAATGGCAT +
Preference number: 4 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFLKQCP*CPSKWH
Trigger: ATGCCATTTGCTTGGGCAGCAAGGACATTGTTTAAG...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GTCTTTTTAATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCATCCCTCTTCTTCGTaGTTCCTTTACTTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: VFLIQMWYRMFNYSRAVIHPSSS*FLYLSC
Trigger: ACAACTCAAGTAAAGGAAGCACGAAGAAGAGGGATG...AATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTATTAAAAAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GTCTTTTTAATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTTGCATGATGATAGGATaGAGGAAATCTCTGGTTTCG +
Preference number: 4 (lower is better)
Translates to: VFLIQMWYRMFNYSRAVICMMIG*RKSLVS
Trigger: CGAAACCAGAGATTTCCTGCATCCTATCATCATGCA...AATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTATTAAAAAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGTGCATGATGATAGGATaGAGGAAATCTCTGGTTTCG +
Preference number: 4 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLCMMIG*RKSLVS
Trigger: CGAAACCAGAGATTTCCTGCATCCTATCATCATGCA...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAAGCTTATCCAGGGAATTaGTCTTCTCACTATTCCTTT +
Preference number: 4 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKAYPGN*SSHYSF
Trigger: AAAGGAATAGTGAGAAGAGCAATTCCCTGGATAAGC...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGATGTACTGGAACTGGTaGAGGCAGACTTCAGATATT +
Preference number: 4 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLMYWNW*RQTSDI
Trigger: AATATCTGAAGTCTGCCTGCACCAGTTCCAGTACAT...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAAACAGATATGATGACTTaGAAATGTGTCCGGACAAAG +
Preference number: 4 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKTDMMT*KCVRTK
Trigger: CTTTGTCCGGACACATTTGCAAGTCATCATATCTGT...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCTTCCAGATCCAAGGCTaGATCTGTCTGACTTTAAAG +
Preference number: 4 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFFQIQG*ICLTLK
Trigger: CTTTAAAGTCAGACAGATGCAGCCTTGGATCTGGAA...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAAAAACGTAAAGGTGATTaGTGTAGATGGTGTAAGGCT +
Preference number: 4 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKKRKGD*CRWCKA
Trigger: AGCCTTACACCATCTACACCAATCACCTTTACGTTT...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCGATGCAGGAAATCTCTaGTTTCGCAGCAACTTAACT +
Preference number: 4 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFDAGNL*FRSNLT
Trigger: AGTTAAGTTGCTGCGAAACCAGAGATTTCCTGCATC...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGACGTTCACCAACTATTaGCTCCAAGACACTTTCAGA +
Preference number: 4 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLTFTNY*LQDTFR
Trigger: TCTGAAAGTGTCTTGGAGCCAATAGTTGGTGAACGT...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CCA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAATTTAAAACGACTCTTTaGACTTGTACATTCCGTGCT +
Preference number: 4 (lower is better)
Translates to: SSSRVSTTPLLRHNENFEFKTTL*TCTFRA
Trigger: AGCACGGAATGTACAAGTCCAAAGAGTCGTTTTAAA...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630992.2
3UTR CAA 72 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTaGTTAAGACACAATGAAAACTTTGAATATTGCCAG +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTP*LRHNENFEYCQ
Trigger: CTGGCAATATTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
3UTR CAA 72 bp CAGGTTAAGGACTGGTATTATTATTGCAGGATAAATTaGGGCATTGGTGTGGGGTTTCTCATGTTAAATTCT +
Preference number: 4 (lower is better)
Translates to: QVKDWYYYCRIN*GIGVGFLMLNS
Trigger: AGAATTTAACATGAGAAACCCCACACCAATGCCCAAATTTATCCTGCAATAATAATACCAGTCCTTAACCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR TCA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCTTGCAGCTTCAAAGTTaGGCTGGAGGATCTTATTTA +
Preference number: 4 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFLQLQS*AGGSYL
Trigger: TAAATAAGATCCTCCAGCTCAACTTTGAAGCTGCAA...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAGTCTGCAAGTAACTTaGGCATGTCATCATTGGATA +
Preference number: 4 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFSLQVT*ACHHWI
Trigger: TATCCAATGATGACATGCTCAAGTTACTTGCAGACT...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GTCTTTTTAATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTTCTCTCCTTGCTGTTTaGACATATAAGCACAGTTTC +
Preference number: 4 (lower is better)
Translates to: VFLIQMWYRMFNYSRAVISLLAV*TYKHSF
Trigger: GAAACTGTGCTTATATGTGCAAACAGCAAGGAGAGA...AATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTATTAAAAAGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448493.7
CDS-3UTR GCA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCTTTCAGTTTGATTTCTaGTTCTCTTGCACTCTTGGC +
Preference number: 4 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFFQFDF*FSCTLG
Trigger: GCCAAGAGTGCAAGAGAAGCAGAAATCAAACTGAAA...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGATTCGCGTTCTTAGATaGCTCTGGATTATCTCGAAA +
Preference number: 4 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLIRVLR*LWIISK
Trigger: TTTCGAGATAATCCAGAGGCATCTAAGAACGCGAAT...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCATTCGCGTTCTTAGATaGCTCTGGATTATCTCGAAA +
Preference number: 4 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFIRVLR*LWIISK
Trigger: TTTCGAGATAATCCAGAGGCATCTAAGAACGCGAAT...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGACAGATATGATGACTTaGAAATGTGTCCGGACAAAG +
Preference number: 4 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLTDMMT*KCVRTK
Trigger: CTTTGTCCGGACACATTTGCAAGTCATCATATCTGT...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAATTCATAGACATGAACTaGAAGTTTATCCAACTTGAC +
Preference number: 4 (lower is better)
Translates to: SSSRVSTTPLLRHNENFEFIDMN*KFIQLD
Trigger: GTCAAGTTGGATAAACTTCCAGTTCATGTCTATGAA...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAATTCATAGACATGAACTaGAAGTTTATCCAACTTGAC +
Preference number: 4 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKFIDMN*KFIQLD
Trigger: GTCAAGTTGGATAAACTTCCAGTTCATGTCTATGAA...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp ACTAAATCTCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTGCTTCAAAGTTGAGCTaGAGGATCTTATTTAGAATT +
Preference number: 4 (lower is better)
Translates to: TKSPGSLVQKLQWSVPLGASKLS*RILFRI
Trigger: AATTCTAAATAAGATCCTCCAGCTCAACTTTGAAGC...ACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGAGATTTAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAGCTTCAAAGTTGAGCTaGAGGATCTTATTTAGAATT +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNEASKLS*RILFRI
Trigger: AATTCTAAATAAGATCCTCCAGCTCAACTTTGAAGC...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAGATGGCAGAAAATCTaGCATTTTTGTCAAGATTTC +
Preference number: 4 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNERWQKI*HFCQDF
Trigger: GAAATCTTGACAAAAATGCCAGATTTTCTGCCATCT...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGAATGTGCTACTTTGTTaGTGCTTATCCAGGGAATTG +
Preference number: 4 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLNVLLC*CLSREL
Trigger: CAATTCCCTGGATAAGCACCAACAAAGTAGCACATT...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAACATACTCCACCATTTTaGCAAAAGGATGAAATTCTT +
Preference number: 4 (lower is better)
Translates to: SSSRVSTTPLLRHNENFEHTPPF*QKDEIL
Trigger: AAGAATTTCATCCTTTTGCCAAAATGGTGGAGTATG...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCCCTCATCTGAATCTTTaGATTCAATGCAAATCGCAA +
Preference number: 4 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFPHLNL*IQCKSQ
Trigger: TTGCGATTTGCATTGAATTCAAAGATTCAGATGAGG...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCTTCTCTATCAAATGCTaGGCCATAGATTTGATCAGT +
Preference number: 4 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFFSIKC*AIDLIS
Trigger: ACTGATCAAATCTATGGCTCAGCATTTGATAGAGAA...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR TCA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCCATAAGTTCAGATGTTaGAGCCTTGTTCCAATATGT +
Preference number: 4 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFHKFRC*SLVPIC
Trigger: ACATATTGGAACAAGGCTTCAACATCTGAACTTATG...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAATATAATGTTCATGGTTaGACACTACACGGAGAAATT +
Preference number: 4 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKYNVHG*TLHGEI
Trigger: AATTTCTCCGTGTAGTGTGCAACCATGAACATTATA...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGAAGCATCATCAGACATaGTCTTTAAGATGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLKHHQT*SLRCRG
Trigger: TCCTCTACATCTTAAAGAGCATGTCTGATGATGCTT...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAACATACTCCACCATTTTaGCAAAAGGATGAAATTCTT +
Preference number: 4 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKHTPPF*QKDEIL
Trigger: AAGAATTTCATCCTTTTGCCAAAATGGTGGAGTATG...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR GCA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCTATAATGTTCATGGTTaGACACTACACGGAGAAATT +
Preference number: 4 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFYNVHG*TLHGEI
Trigger: AATTTCTCCGTGTAGTGTGCAACCATGAACATTATA...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CCA 90 bp GTCTTTTTAATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTTTCATAGACATGAACTaGAAGTTTATCCAACTTGAC +
Preference number: 4 (lower is better)
Translates to: VFLIQMWYRMFNYSRAVIFIDMN*KFIQLD
Trigger: GTCAAGTTGGATAAACTTCCAGTTCATGTCTATGAA...AATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTATTAAAAAGAC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TCTAAACACGCCTCCCCGGCTCCTCCTCAGGCAGGCGCTATGGCTGTGGGGGAGTCCTTGTGCAGGCTGTaGTCCAGGGTGCTTCCCTTC +
Preference number: 5 (lower is better)
Translates to: SKHASPAPPQAGAMAVGESLCRL*SRVLPF
Trigger: GAAGGGAAGCACCCTGGACAACAGCCTGCACAAGGA...CTCCCCCACAGCCATAGCGCCTGCCTGAGGAGGAGCCGGGGAGGCGTGTTTAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS CCA 90 bp CGGATACTGCATGGCGGCTTCATGAAGGATGCCCTTGAGGACAGATaGGCTCTGCCCACTGCCATTCATCAGCGCCGGGGACGTGGTGGC +
Preference number: 5 (lower is better)
Translates to: RILHGGFMKDALEDR*ALPTAIHQRRGRGG
Trigger: GCCACCACGTCCCCGGCGCTGATGAATGGCAGTGGGCAGAGCCCATCTGTCCTCAAGGGCATCCTTCATGAAGCCGCCATGCAGTATCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000339416.7
ENST00000376460.5
ENST00000427887.2
ENST00000442173.5
ENST00000448493.7
ENST00000627024.2
ENST00000630992.2
ENST00000652315.1
ENST00000682017.1
CDS-3UTR CAA 90 bp GCGGCCCGAGTGCATGACCTCGGTCACTTTGCTGTAGGCCCGGTGCAGCGTGTCAAAGGCCTGGCTGGTTaGGCAGATGGCATCAGGAGA +
Preference number: 5 (lower is better)
Translates to: AARVHDLGHFAVGPVQRVKGLAG*ADGIRR
Trigger: TCTCCTGATGCCATCTGCCAAACCAGCCAGGCCTTT...GACACGCTGCACCGGGCCTACAGCAAAGTGACCGAGGTCATGCACTCGGGCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CAA 90 bp CCGGCTCCTCCTCAGGCAGGCGCTATGGCTGTGGGGGAGAAGGGGCGGCTCCCACTTCCTTTACTTGAGTaGTCACAGCTGACATGGAAG +
Preference number: 5 (lower is better)
Translates to: PAPPQAGAMAVGEKGRLPLPLLE*SQLTWK
Trigger: CTTCCATGTCAGCTGTGACAACTCAAGTAAAGGAAG...TGGGAGCCGCCCCTTCTCCCCCACAGCCATAGCGCCTGCCTGAGGAGGAGCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR CAA 90 bp CTCGGCTTTCCAGAGTCCATCTGCGCACTGCTCAAGGAGCTCCATCAGCACATCGCGCCCAGCAGGTCCTaGTGCAGGCTGTTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: LGFPESICALLKELHQHIAPSRS*CRLLSR
Trigger: CCTGGACAACAGCCTGCACAAGGACCTGCTGGGCGC...GATGTGCTGATGGAGCTCCTTGAGCAGTGCGCAGATGGACTCTGGAAAGCCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp ATCCTGAGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGGCGCCCAGCAGGTCCTaGTGCAGGCTGTTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: ILRSHRHPGPLFQGMAEGAPSRS*CRLLSR
Trigger: CCTGGACAACAGCCTGCACAAGGACCTGCTGGGCGC...CCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCTCAGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp GGCCCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCGCTTGAAGGCGGTGCATCCTaGTCTAAACACGCCTCCCCG +
Preference number: 5 (lower is better)
Translates to: GPVQRVIQMGQPLKIPPLEGGAS*SKHASP
Trigger: CGGGGAGGCGTGTTTAGACAAGGATGCACCGCCTTC...AAGCGGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR CAA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCAGGATGGTGCGCCGTTaGCACTGCTCTTCCACCCCG +
Preference number: 5 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTRMVRR*HCSSTP
Trigger: CGGGGTGGAAGAGCAGTGCAAACGGCGCACCATCCT...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GTAGGCCCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCGGTGGCTCAATTAGCTTaGGCTTTGCCGGCACAGGGC +
Preference number: 5 (lower is better)
Translates to: VGPVQRVIQMGQPLKIPPVAQLA*ALPAQG
Trigger: GCCCTGTGCCGGCAAAGCCAAAGCTAATTGAGCCAC...CGGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGGGCCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CAA 90 bp ATCCTGAGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGAGGATGGTGCGCCGTTaGCACTGCTCTTCCACCCCG +
Preference number: 5 (lower is better)
Translates to: ILRSHRHPGPLFQGMAEGRMVRR*HCSSTP
Trigger: CGGGGTGGAAGAGCAGTGCAAACGGCGCACCATCCT...CCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCTCAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CAA 90 bp CCGAAGGAAGGTTCGCCGAGACCGGGATGTGCTGCTCGCTTGTCACCACCCTTCTTCGTCCCTCTTCCCTaGGTACCACTGAGTAGGTGG +
Preference number: 5 (lower is better)
Translates to: PKEGSPRPGCAARLSPPFFVPLP*VPLSRW
Trigger: CCACCTACTCAGTGGTACCAAGGGAAGAGGGACGAA...GAAGGGTGGTGACAAGCGAGCAGCACATCCCGGTCTCGGCGAACCTTCCTTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS TCA 90 bp CAGAGGTCTTCAGCAGCTGCTGGAAGCACTTCCGGGACACATGACTaGCTCCAGGGAAAAGGGATCAACTGGGAGTGGCTCACCTGCTGC +
Preference number: 5 (lower is better)
Translates to: QRSSAAAGSTSGTHD*LQGKGINWEWLTCC
Trigger: GCAGCAGGTGAGCCACTCCCAGTTGATCCCTTTTCCCTGGAGTCAGTCATGTGTCCCGGAAGTGCTTCCAGCAGCTGCTGAAGACCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479769.1
CDS TCA 90 bp AGGGCAGAGGTCTTCAGCAGCTGCTGGAAGCACTTCCGGGACACATaGCTGACTCCAGGGAAAAGGGATCAACTGGGAGTGGCTCACCTG +
Preference number: 5 (lower is better)
Translates to: RAEVFSSCWKHFRDT*LTPGKRDQLGVAHL
Trigger: CAGGTGAGCCACTCCCAGTTGATCCCTTTTCCCTGGAGTCAGTCATGTGTCCCGGAAGTGCTTCCAGCAGCTGCTGAAGACCTCTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479769.1
CDS-3UTR CAA 90 bp GCGGCCCGAGTGCATGACCTCGGTCACTTTGCTGTAGGCCCGGTGCAGCGTGTCAAGGCTGAGTGTGTTTaGGTATGCAGGGCACAAATT +
Preference number: 5 (lower is better)
Translates to: AARVHDLGHFAVGPVQRVKAECV*VCRAQI
Trigger: AATTTGTGCCCTGCATACCAAAACACACTCAGCCTT...GACACGCTGCACCGGGCCTACAGCAAAGTGACCGAGGTCATGCACTCGGGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCCGTGGACATAGCACATaGCTGCCTCTGAGAGATCGC +
Preference number: 5 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTRGHST*LPLRDR
Trigger: GCGATCTCTCAGAGGCAGCAATGTGCTATGTCCACG...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS GCA 90 bp GTCACGCTGATGGCACTGTTCATGTTGCCTTTGTACAGCCAGCCATaGTTGGTGATCCCACCCTTCTGGGAACCAAGGGAGGCAGCATCC +
Preference number: 5 (lower is better)
Translates to: VTLMALFMLPLYSQP*LVIPPFWEPREAAS
Trigger: GGATGCTGCCTCCCTTGGTTCCCAGAAGGGTGGGATCACCAAGCATGGCTGGCTGTACAAAGGCAACATGAACAGTGCCATCAGCGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339416.7
ENST00000376460.5
ENST00000427887.2
ENST00000442173.5
ENST00000448493.7
ENST00000627024.2
ENST00000630992.2
ENST00000652315.1
ENST00000682017.1
CDS GCA 90 bp TGCCCACTGCCATTCATCAGCGCCGGGGACGTGGTGGCGAGCATTTaGCTCACTGAGAAATGGTTCAGGTCTACGTGGAAATCGGCAGAA +
Preference number: 5 (lower is better)
Translates to: CPLPFISAGDVVASI*LTEKWFRSTWKSAE
Trigger: TTCTGCCGATTTCCACGTAGACCTGAACCATTTCTCAGTGAGGCAAATGCTCGCCACCACGTCCCCGGCGCTGATGAATGGCAGTGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000339416.7
ENST00000376460.5
ENST00000427887.2
ENST00000442173.5
ENST00000448493.7
ENST00000627024.2
ENST00000630992.2
ENST00000652315.1
ENST00000682017.1
CDS GCA 90 bp TTCTCGGCTGAAAACGCAAGTCAGAAAGTCTGCAACTGGAACAGCTaGGAGTCCCTGGCCGTGCAAGGCACAGGCATGCCAGTGGTCCAA +
Preference number: 5 (lower is better)
Translates to: FSAENASQKVCNWNS*ESLAVQGTGMPVVQ
Trigger: TTGGACCACTGGCATGCCTGTGCCTTGCACGGCCAGGGACTCGCAGCTGTTCCAGTTGCAGACTTTCTGACTTGCGTTTTCAGCCGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000442173.5
ENST00000627024.2
ENST00000630992.2
ENST00000682017.1
CDS-3UTR CAA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCGCAGCATCCTCATCTTaGTCGACCTCCTCGTCAACT +
Preference number: 5 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTAASSS*STSSST
Trigger: AGTTGACGAGGAGGTCGACAAAGATGAGGATGCTGC...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GGCCCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCGCTTCTGTTCATGTTGCCTTaGTACAGCCAGCCATGCTTG +
Preference number: 5 (lower is better)
Translates to: GPVQRVIQMGQPLKIPPLLFMLP*YSQPCL
Trigger: CAAGCATGGCTGGCTGTACAAAGGCAACATGAACAG...AAGCGGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp CCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCGCTTCTCCTTTGGCATGCCTGCTaGGCATTCTTCAGCACCTTC +
Preference number: 5 (lower is better)
Translates to: PVQRVIQMGQPLKIPPLLLWHAC*AFFSTF
Trigger: GAAGGTGCTGAAGAATGCCAAGCAGGCATGCCAAAG...GAGAAGCGGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCCCAGGAGTAGCCAACTaGGGTTTCAACGACATCCCT +
Preference number: 5 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTPGVAN*GFNDIP
Trigger: AGGGATGTCGTTGAAACCCAAGTTGGCTACTCCTGG...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp CTGAGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGTTTTCCTTGTGCAGGCTGTaGTCCAGGGTGCTTCCCTTC +
Preference number: 5 (lower is better)
Translates to: LRSHRHPGPLFQGMAEGFSLCRL*SRVLPF
Trigger: GAAGGGAAGCACCCTGGACAACAGCCTGCACAAGGA...AAACCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGGCGCCCAGCAGGTCCTaGTGCAGGCTGTTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: ALESILSLQMTKQVPTHGAPSRS*CRLLSR
Trigger: CCTGGACAACAGCCTGCACAAGGACCTGCTGGGCGC...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp AGCGCTCGGCTTTCCAGAGTCCATCTGCGCACTGCTCAAGGAGCTCCATCAGCACTGTTGGCACAGTTGTaGATGATGGACAGGGACTGC +
Preference number: 5 (lower is better)
Translates to: SARLSRVHLRTAQGAPSALLAQL*MMDRDC
Trigger: GCAGTCCCTGTCCATCATCAACAACTGTGCCAACAG...TGCTGATGGAGCTCCTTGAGCAGTGCGCAGATGGACTCTGGAAAGCCGAGCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp GGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTGTGGCTCAATTAGCTTaGGCTTTGCCGGCACAGGGC +
Preference number: 5 (lower is better)
Translates to: GVTGIRDLYFRAWLRGFSVAQLA*ALPAQG
Trigger: GCCCTGTGCCGGCAAAGCCAAAGCTAATTGAGCCAC...ACTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTCATCCCGTGAACCATaGTGCTTGTTGGAGTCCCAC +
Preference number: 5 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTSSREP*CLLESH
Trigger: GTGGGACTCCAACAAGCACAATGGTTCACGGGATGA...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS CCA 90 bp ACAGGCTCCCACTGTACCATCTTCGTGACAAGCAGTCACCGGTACTaGAACAGAAGGGAAGCTCTGAGCTGCCGTACTAGAATCCGCTCC +
Preference number: 5 (lower is better)
Translates to: TGSHCTIFVTSSHRY*NRREALSCRTRIRS
Trigger: GGAGCGGATTCTAGTACGGCAGCTCAGAGCTTCCCTTCTGTTCCAGTACCGGTGACTGCTTGTCACGAAGATGGTACAGTGGGAGCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000448493.7
CDS CCA 90 bp AAAACGCAAGTCAGAAAGTCTGCAACTGGAACAGCTGCGAGTCCCTaGCCGTGCAAGGCACAGGCATGCCAGTGGTCCAAGGAAGGAAAG +
Preference number: 5 (lower is better)
Translates to: KTQVRKSATGTAASP*PCKAQACQWSKEGK
Trigger: CTTTCCTTCCTTGGACCACTGGCATGCCTGTGCCTTGCACGGCCAGGGACTCGCAGCTGTTCCAGTTGCAGACTTTCTGACTTGCGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000442173.5
ENST00000627024.2
ENST00000630992.2
ENST00000682017.1
CDS-3UTR CAA 90 bp TTAGGACAGTCTGCAGAATGGACAGGAGGCTCACCTGCCCGAAGAAGGCTACCCCCTTCGCAGGCACTGTaGAGCATATGTATCGACCCT +
Preference number: 5 (lower is better)
Translates to: LGQSAEWTGGSPARRRLPPSQAL*SICIDP
Trigger: AGGGTCGATACATATGCTCAACAGTGCCTGCGAAGG...GGGTAGCCTTCTTCGGGCAGGTGAGCCTCCTGTCCATTCTGCAGACTGTCCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR CAA 90 bp TGTAGGCCCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCATGGCACTGTTCATGTaGCCTTTGTACAGCCAGCCA +
Preference number: 5 (lower is better)
Translates to: CRPGAACHTDGPASQNPSMALFM*PLYSQP
Trigger: TGGCTGGCTGTACAAAGGCAACATGAACAGTGCCAT...GGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGGGCCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp TTAGGACAGTCTGCAGAATGGACAGGAGGCTCACCTGCCCGAAGAAGGCTACCCCCAGGAGTAGCCAACTaGGGTTTCAACGACATCCCT +
Preference number: 5 (lower is better)
Translates to: LGQSAEWTGGSPARRRLPPGVAN*GFNDIP
Trigger: AGGGATGTCGTTGAAACCCAAGTTGGCTACTCCTGG...GGGTAGCCTTCTTCGGGCAGGTGAGCCTCCTGTCCATTCTGCAGACTGTCCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR CAA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCGTCAAGCTGGAGGTCTaGGTATCTTTGAATCCTGCC +
Preference number: 5 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTVKLEV*VSLNPA
Trigger: GGCAGGATTCAAAGATACCAAGACCTCCAGCTTGAC...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp CCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATGCGCCCAGCAGGTCCTaGTGCAGGCTGTTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: PEFANDKASPHTRAMRCNAPSRS*CRLLSR
Trigger: CCTGGACAACAGCCTGCACAAGGACCTGCTGGGCGC...ATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp CAGGCGCTATGGCTGTGGGGGAGAAGGGGCGGCTCCCACTGGACTGCTTCTTTCCAATGTGCTACTTTGTaGGTGCTTATCCAGGGAATT +
Preference number: 5 (lower is better)
Translates to: QALWLWGRRGGSHWTASFQCATL*VLIQGI
Trigger: AATTCCCTGGATAAGCACCAACAAAGTAGCACATTG...GAAAGAAGCAGTCCAGTGGGAGCCGCCCCTTCTCCCCCACAGCCATAGCGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR CAA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCCTGATGGAGCTCAGCTaGGAGTTACAGCACTTGAGA +
Preference number: 5 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTLMELS*ELQHLR
Trigger: TCTCAAGTGCTGTAACTCCAAGCTGAGCTCCATCAG...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GAGCAGCTGGGAGGCCTCCGTCCTGATGGAGCTCAGCTTGGAGTTACAGCACTTCTGATGGAGCTCAGCTaGGAGTTACAGCACTTGAGA +
Preference number: 5 (lower is better)
Translates to: EQLGGLRPDGAQLGVTALLMELS*ELQHLR
Trigger: TCTCAAGTGCTGTAACTCCAAGCTGAGCTCCATCAG...AAGTGCTGTAACTCCAAGCTGAGCTCCATCAGGACGGAGGCCTCCCAGCTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp CTTTCCAGAGTCCATCTGCGCACTGCTCAAGGAGCTCCATCAGCACATCCTCGTCGTGGACATAGCACATaGCTGCCTCTGAGAGATCGC +
Preference number: 5 (lower is better)
Translates to: LSRVHLRTAQGAPSAHPRRGHST*LPLRDR
Trigger: GCGATCTCTCAGAGGCAGCAATGTGCTATGTCCACG...ACGAGGATGTGCTGATGGAGCTCCTTGAGCAGTGCGCAGATGGACTCTGGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGAGGATGGTGCGCCGTTaGCACTGCTCTTCCACCCCG +
Preference number: 5 (lower is better)
Translates to: ALESILSLQMTKQVPTHGRMVRR*HCSSTP
Trigger: CGGGGTGGAAGAGCAGTGCAAACGGCGCACCATCCT...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp ATCCTGAGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGTCATCCCGTGAACCATaGTGCTTGTTGGAGTCCCAC +
Preference number: 5 (lower is better)
Translates to: ILRSHRHPGPLFQGMAEGSSREP*CLLESH
Trigger: GTGGGACTCCAACAAGCACAATGGTTCACGGGATGA...CCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCTCAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CAA 90 bp CACACACGGGCCATGAGATGTAATCACACGACCGAAGACGAGCTGGTCATCCCGTCATCCCGTGAACCATaGTGCTTGTTGGAGTCCCAC +
Preference number: 5 (lower is better)
Translates to: HTRAMRCNHTTEDELVIPSSREP*CLLESH
Trigger: GTGGGACTCCAACAAGCACAATGGTTCACGGGATGA...CGGGATGACCAGCTCGTCTTCGGTCGTGTGATTACATCTCATGGCCCGTGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000630992.2
ENST00000652315.1
CDS GCA 90 bp ATTTATCAGCCTGCATTCTCGGCTGAAAACGCAAGTCAGAAAGTCTaGAACTGGAACAGCTGCGAGTCCCTGGCCGTGCAAGGCACAGGC +
Preference number: 5 (lower is better)
Translates to: IYQPAFSAENASQKV*NWNSCESLAVQGTG
Trigger: GCCTGTGCCTTGCACGGCCAGGGACTCGCAGCTGTTCCAGTTGCAGACTTTCTGACTTGCGTTTTCAGCCGAGAATGCAGGCTGATAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000627024.2
ENST00000630992.2
ENST00000682017.1
CDS GCA 90 bp CAGCTCTCCTCCTCCTCTTCAGCACTGCGTATGACACAAGCAGAGTaGCTTCGGAGCAGCTTCTCCCTCTTATCCAGGGAATTGCTCTTC +
Preference number: 5 (lower is better)
Translates to: QLSSSSSALRMTQAE*LRSSFSLLSRELLF
Trigger: GAAGAGCAATTCCCTGGATAAGAGGGAGAAGCTGCTCCGAAGGCACTCTGCTTGTGTCATACGCAGTGCTGAAGAGGAGGAGGAGAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638020.1
CDS-3UTR CAA 90 bp GTAGGCCCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCGACCTCAGTAGCAATGTaGGCTTCAAGTAATGACTGG +
Preference number: 5 (lower is better)
Translates to: VGPVQRVIQMGQPLKIPPTSVAM*ASSNDW
Trigger: CCAGTCATTACTTGAAGCCAACATTGCTACTGAGGT...CGGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGGGCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCATAAGCCGGTCACTGTaGGCACAGTTGTTGATGATG +
Preference number: 5 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTISRSL*AQLLMM
Trigger: CATCATCAACAACTGTGCCAACAGTGACCGGCTTAT...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp CACACACGGGCCATGAGATGTAATCACACGACCGAAGACGAGCTGGTCATCCCGTCCAGATCCTTAGGGTaGACCTTGCCAGAATCCTGT +
Preference number: 5 (lower is better)
Translates to: HTRAMRCNHTTEDELVIPSRSLG*TLPESC
Trigger: ACAGGATTCTGGCAAGGTCAACCCTAAGGATCTGGA...CGGGATGACCAGCTCGTCTTCGGTCGTGTGATTACATCTCATGGCCCGTGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GCGGCCCGAGTGCATGACCTCGGTCACTTTGCTGTAGGCCCGGTGCAGCGTGTCTGTCAGGATATCGCTTaGTGTTTGTATCATCTAAGA +
Preference number: 5 (lower is better)
Translates to: AARVHDLGHFAVGPVQRVCQDIA*CLYHLR
Trigger: TCTTAGATGATACAAACACAAAGCGATATCCTGACA...GACACGCTGCACCGGGCCTACAGCAAAGTGACCGAGGTCATGCACTCGGGCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CAA 90 bp GTAGGCCCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCGCACACAGAAAAAGTCTaGCGGGACAGAAGACTTTTG +
Preference number: 5 (lower is better)
Translates to: VGPVQRVIQMGQPLKIPPHTEKV*RDRRLL
Trigger: CAAAAGTCTTCTGTCCCGCAAGACTTTTTCTGTGTG...CGGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGGGCCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CAA 90 bp TGTAGGCCCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCTGTGAAGCTGGGTATTaGGGGGCCTGCTATGATAAA +
Preference number: 5 (lower is better)
Translates to: CRPGAACHTDGPASQNPSCEAGY*GACYDK
Trigger: TTTATCATAGCAGGCCCCCAAATACCCAGCTTCACA...GGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGGGCCTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS TCA 90 bp GTGACTGAAAATATTCCCTGCTTCGGATACTGCATGGCGGCTTCATaGAGGATGCCCTTGAGGACAGATGGGCTCTGCCCACTGCCATTC +
Preference number: 5 (lower is better)
Translates to: VTENIPCFGYCMAAS*RMPLRTDGLCPLPF
Trigger: GAATGGCAGTGGGCAGAGCCCATCTGTCCTCAAGGGCATCCTTCATGAAGCCGCCATGCAGTATCCGAAGCAGGGAATATTTTCAGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000339416.7
ENST00000376460.5
ENST00000427887.2
ENST00000442173.5
ENST00000448493.7
ENST00000627024.2
ENST00000630992.2
ENST00000652315.1
ENST00000682017.1
CDS-3UTR CAA 90 bp CTGGAATCTGGTTCCCCCAATGCCAACAACGTCTGCTATCAGCTGGCTGACAGATCCACATCCTCTTCCTaGGCTCTTCCGAAACAGGCT +
Preference number: 5 (lower is better)
Translates to: LESGSPNANNVCYQLADRSTSSS*ALPKQA
Trigger: AGCCTGTTTCGGAAGAGCCAAGGAAGAGGATGTGGA...TCTGTCAGCCAGCTGATAGCAGACGTTGTTGGCATTGGGGGAACCAGATTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR CAA 90 bp TCCTGCATCCCCACGTCTTCCATCATGGAGGCCTCCTCGTCGATGTTTGGGGTATCCAACTTGACCACTTaGTTCGGAAGCTGTCGAAAC +
Preference number: 5 (lower is better)
Translates to: SCIPTSSIMEASSSMFGVSNLTT*FGSCRN
Trigger: GTTTCGACAGCTTCCGAACAAAGTGGTCAAGTTGGA...TACCCCAAACATCGACGAGGAGGCCTCCATGATGGAAGACGTGGGGATGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp CTGAGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGTTTATGGCACTGTTCATGTaGCCTTTGTACAGCCAGCCA +
Preference number: 5 (lower is better)
Translates to: LRSHRHPGPLFQGMAEGFMALFM*PLYSQP
Trigger: TGGCTGGCTGTACAAAGGCAACATGAACAGTGCCAT...AAACCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp AGAGCATGGAGCGTTACCAATGCCGGAGATGGCGCCCAGCAGGTCCTTGTGCAGGCCATTTCGCTTTTCTaGCATTGCAGCTTCAAAGTT +
Preference number: 5 (lower is better)
Translates to: RAWSVTNAGDGAQQVLVQAISLF*HCSFKV
Trigger: AACTTTGAAGCTGCAATGCAAGAAAAGCGAAATGGC...CTGCACAAGGACCTGCTGGGCGCCATCTCCGGCATTGGTAACGCTCCATGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CAA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCATCGTGGTCATGGATTaGGTCAGTTCTTCATGCACT +
Preference number: 5 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTIVVMD*VSSSCT
Trigger: AGTGCATGAAGAACTGACCAAATCCATGACCACGAT...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GAAGTAGAGCAGCTGGGAGGCCTCCGTCCTGATGGAGCTCAGCTTGGAGTTACAAAATCGGCAGAAGGCTaGAGAATCGTGGTCATGGAT +
Preference number: 5 (lower is better)
Translates to: EVEQLGGLRPDGAQLGVTKSAEG*RIVVMD
Trigger: ATCCATGACCACGATTCTCAAGCCTTCTGCCGATTT...TGTAACTCCAAGCTGAGCTCCATCAGGACGGAGGCCTCCCAGCTGCTCTACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp AGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGGTCAAGCTGGAGGTCTaGGTATCTTTGAATCCTGCC +
Preference number: 5 (lower is better)
Translates to: RSHRHPGPLFQGMAEGFQVKLEV*VSLNPA
Trigger: GGCAGGATTCAAAGATACCAAGACCTCCAGCTTGAC...CTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTGCCTGATGGCTCCTaGAAGCATATCTGTCATCAA +
Preference number: 5 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTLPDGS*KHICHQ
Trigger: TTGATGACAGATATGCTTCAAGGAGCCATCAGGCAA...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCTCCTTGTGCAGGCTGTaGTCCAGGGTGCTTCCCTTC +
Preference number: 5 (lower is better)
Translates to: FGKHPEFANDKASPHTRASLCRL*SRVLPF
Trigger: GAAGGGAAGCACCCTGGACAACAGCCTGCACAAGGA...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp AATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACACGGCGCCCAGCAGGTCCTaGTGCAGGCTGTTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: NTQESNLDFKVLPHKCDTAPSRS*CRLLSR
Trigger: CCTGGACAACAGCCTGCACAAGGACCTGCTGGGCGC...CGTGTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp AGGGACTGCTGGAATCTGGTTCCCCCAATGCCAACAACGTCTGCTATCAGCTGGCTGATGGAGCTCAGCTaGGAGTTACAGCACTTGAGA +
Preference number: 5 (lower is better)
Translates to: RDCWNLVPPMPTTSAISWLMELS*ELQHLR
Trigger: TCTCAAGTGCTGTAACTCCAAGCTGAGCTCCATCAG...CCAGCTGATAGCAGACGTTGTTGGCATTGGGGGAACCAGATTCCAGCAGTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp CACACACGGGCCATGAGATGTAATCACACGACCGAAGACGAGCTGGTCATCCCGATAAGCCGGTCACTGTaGGCACAGTTGTTGATGATG +
Preference number: 5 (lower is better)
Translates to: HTRAMRCNHTTEDELVIPISRSL*AQLLMM
Trigger: CATCATCAACAACTGTGCCAACAGTGACCGGCTTAT...CGGGATGACCAGCTCGTCTTCGGTCGTGTGATTACATCTCATGGCCCGTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCACCGTGCGTATCCTTTaGGTTAAGTCCTTCACATCA +
Preference number: 5 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTTVRIL*VKSFTS
Trigger: TGATGTGAAGGACTTAACCAAAAGGATACGCACGGT...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGCGTGGACATAGCACATaGCTGCCTCTGAGAGATCGC +
Preference number: 5 (lower is better)
Translates to: GKHPEFANDKASPHTRAMRGHST*LPLRDR
Trigger: GCGATCTCTCAGAGGCAGCAATGTGCTATGTCCACG...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATCACACGACCCGTGGACATAGCACATaGCTGCCTCTGAGAGATCGC +
Preference number: 5 (lower is better)
Translates to: ANDKASPHTRAMRCNHTTRGHST*LPLRDR
Trigger: GCGATCTCTCAGAGGCAGCAATGTGCTATGTCCACG...GGTCGTGTGATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GAAGTAGAGCAGCTGGGAGGCCTCCGTCCTGATGGAGCTCAGCTTGGAGTTACAATCAGCACATCCTCGTaGAAATGGACATCCTGCATC +
Preference number: 5 (lower is better)
Translates to: EVEQLGGLRPDGAQLGVTISTSS*KWTSCI
Trigger: GATGCAGGATGTCCATTTCAACGAGGATGTGCTGAT...TGTAACTCCAAGCTGAGCTCCATCAGGACGGAGGCCTCCCAGCTGCTCTACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp GGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTGCTGAGGGGTTTCAGTaGTTGACTATCACAAGCAGG +
Preference number: 5 (lower is better)
Translates to: GVTGIRDLYFRAWLRGFSAEGFQ*LTITSR
Trigger: CCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGC...ACTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp CTTTCCAGAGTCCATCTGCGCACTGCTCAAGGAGCTCCATCAGCACATCCTCGTGCTGAGGGGTTTCAGTaGTTGACTATCACAAGCAGG +
Preference number: 5 (lower is better)
Translates to: LSRVHLRTAQGAPSAHPRAEGFQ*LTITSR
Trigger: CCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGC...ACGAGGATGTGCTGATGGAGCTCCTTGAGCAGTGCGCAGATGGACTCTGGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS TCA 90 bp AACAAACAAGCTCTGTGCTTCCTCTTCCGCCTTCGCAGGCACTGTTaGGCATATGTATCGACCCTGTCGTCTCAGGATGGCCGTCTGAAA +
Preference number: 5 (lower is better)
Translates to: NKQALCFLFRLRRHC*AYVSTLSSQDGRLK
Trigger: TTTCAGACGGCCATCCTGAGACGACAGGGTCGATACATATGCTCAACAGTGCCTGCGAAGGCGGAAGAGGAAGCACAGAGCTTGTTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339416.7
ENST00000376460.5
ENST00000427887.2
ENST00000442173.5
ENST00000448493.7
ENST00000627024.2
ENST00000630992.2
ENST00000652315.1
ENST00000682017.1
CDS CCA 90 bp TGTTACGGGAAACAGGCAATGTCTGAGACTTTCGATCATGAACTATaGGTCCCAACCCCTCCTGGTTCCCAAGCAGGAAGGAGAAGAGCC +
Preference number: 5 (lower is better)
Translates to: CYGKQAMSETFDHEL*VPTPPGSQAGRRRA
Trigger: GGCTCTTCTCCTTCCTGCTTGGGAACCAGGAGGGGTTGGGACCCATAGTTCATGATCGAAAGTCTCAGACATTGCCTGTTTCCCGTAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340449.7
ENST00000472874.1
CDS-3UTR CAA 90 bp GGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTTCCAACTTGACCACTTaGTTCGGAAGCTGTCGAAAC +
Preference number: 5 (lower is better)
Translates to: GVTGIRDLYFRAWLRGFSSNLTT*FGSCRN
Trigger: GTTTCGACAGCTTCCGAACAAAGTGGTCAAGTTGGA...ACTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp TCCTGCATCCCCACGTCTTCCATCATGGAGGCCTCCTCGTCGATGTTTGGGGTAGGAAGTTTATCCAACTaGACCACTTTGTTCGGAAGC +
Preference number: 5 (lower is better)
Translates to: SCIPTSSIMEASSSMFGVGSLSN*TTLFGS
Trigger: GCTTCCGAACAAAGTGGTCAAGTTGGATAAACTTCC...TACCCCAAACATCGACGAGGAGGCCTCCATGATGGAAGACGTGGGGATGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp TGGGAGGCCTCCGTCCTGATGGAGCTCAGCTTGGAGTTACAGCACTTGAGAATCGGATCCATCGCCAAGTaGAATCAGGTGGAAAAATCG +
Preference number: 5 (lower is better)
Translates to: WEASVLMELSLELQHLRIGSIAK*NQVEKS
Trigger: CGATTTTTCCACCTGATTCAACTTGGCGATGGATCC...GATTCTCAAGTGCTGTAACTCCAAGCTGAGCTCCATCAGGACGGAGGCCTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCGCCATTTCGCTTTTCTaGCATTGCAGCTTCAAAGTT +
Preference number: 5 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTAISLF*HCSFKV
Trigger: AACTTTGAAGCTGCAATGCAAGAAAAGCGAAATGGC...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GTAGGTCCCCAGAAGCCTGCGGCCCGAGTGCATGACCTCGGTCACTTTGCTGTAGCAGAAATCTTCCGGTaGTATTTTATGTCAAACAGG +
Preference number: 5 (lower is better)
Translates to: VGPQKPAARVHDLGHFAVAEIFR*YFMSNR
Trigger: CCTGTTTGACATAAAATACAACCGGAAGATTTCTGC...TACAGCAAAGTGACCGAGGTCATGCACTCGGGCCGCAGGCTTCTGGGGACCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGCCAGGAGTAGCCAACTaGGGTTTCAACGACATCCCT +
Preference number: 5 (lower is better)
Translates to: GKHPEFANDKASPHTRAMPGVAN*GFNDIP
Trigger: AGGGATGTCGTTGAAACCCAAGTTGGCTACTCCTGG...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GAAGTAGAGCAGCTGGGAGGCCTCCGTCCTGATGGAGCTCAGCTTGGAGTTACAATTTTCAGCAGTGGCTaGCCTCCATCTACCCATTTA +
Preference number: 5 (lower is better)
Translates to: EVEQLGGLRPDGAQLGVTIFSSG*PPSTHL
Trigger: TAAATGGGTAGATGGAGGCAAGCCACTGCTGAAAAT...TGTAACTCCAAGCTGAGCTCCATCAGGACGGAGGCCTCCCAGCTGCTCTACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp AGCGCTCGGCTTTCCAGAGTCCATCTGCGCACTGCTCAAGGAGCTCCATCAGCACGCAGCAACTTAACTTaGGAGTTCTCTATCAAATGC +
Preference number: 5 (lower is better)
Translates to: SARLSRVHLRTAQGAPSARSNLT*EFSIKC
Trigger: GCATTTGATAGAGAACTCCAAAGTTAAGTTGCTGCG...TGCTGATGGAGCTCCTTGAGCAGTGCGCAGATGGACTCTGGAAAGCCGAGCGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCAAGGTGAAACATCTCTaGATGAAGACAGCAAGGCTA +
Preference number: 5 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTKVKHL*MKTARL
Trigger: TAGCCTTGCTGTCTTCATCAAGAGATGTTTCACCTT...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GAGCAGCTGGGAGGCCTCCGTCCTGATGGAGCTCAGCTTGGAGTTACAGCACTTGAGGTCTTGGTATCTTaGAATCCTGCCTTTTCCAAA +
Preference number: 5 (lower is better)
Translates to: EQLGGLRPDGAQLGVTALEVLVS*NPAFSK
Trigger: TTTGGAAAAGGCAGGATTCAAAGATACCAAGACCTC...AAGTGCTGTAACTCCAAGCTGAGCTCCATCAGGACGGAGGCCTCCCAGCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp GCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGAAAGCGCCCAGCAGGTCCTaGTGCAGGCTGTTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: AEGFQLLTITSRKRILRKAPSRS*CRLLSR
Trigger: CCTGGACAACAGCCTGCACAAGGACCTGCTGGGCGC...TTTCCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp TGTAGGCCCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCTGTTTGGAGTTGAGGTaGTATATGGAGAAGCAATGC +
Preference number: 5 (lower is better)
Translates to: CRPGAACHTDGPASQNPSCLELR*YMEKQC
Trigger: GCATTGCTTCTCCATATACAACCTCAACTCCAAACA...GGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGGGCCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR CAA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTGTTTGGAGTTGAGGTaGTATATGGAGAAGCAATGC +
Preference number: 5 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTCLELR*YMEKQC
Trigger: GCATTGCTTCTCCATATACAACCTCAACTCCAAACA...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000652315.1
CDS-3UTR CAA 90 bp CTTCAAGTAATGACTGGTGCAGAACATCTGCGTCCGAGTGGCCATAGCTGTGGTCTGTTGGCACAGTTGTaGATGATGGACAGGGACTGC +
Preference number: 5 (lower is better)
Translates to: LQVMTGAEHLRPSGHSCGLLAQL*MMDRDC
Trigger: GCAGTCCCTGTCCATCATCAACAACTGTGCCAACAG...ACCACAGCTATGGCCACTCGGACGCAGATGTTCTGCACCAGTCATTACTTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR CAA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGCTGTTGGCACAGTTGTaGATGATGGACAGGGACTGC +
Preference number: 5 (lower is better)
Translates to: GKHPEFANDKASPHTRAMLLAQL*MMDRDC
Trigger: GCAGTCCCTGTCCATCATCAACAACTGTGCCAACAG...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACGAAGGCGGTGCATCCTaGTCTAAACACGCCTCCCCG +
Preference number: 5 (lower is better)
Translates to: VIGFGKHPEFANDKASPHEGGAS*SKHASP
Trigger: CGGGGAGGCGTGTTTAGACAAGGATGCACCGCCTTC...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000652315.1
CDS-3UTR CAA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGGAAGGCGGTGCATCCTaGTCTAAACACGCCTTTCCG +
Preference number: 5 (lower is better)
Translates to: ALESILSLQMTKQVPTHGEGGAS*SKHAFP
Trigger: CGGAAAGGCGTGTTTAGACAAGGATGCACCGCCTTC...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400228.6
ENST00000448493.7
ENST00000630992.2
CDS-3UTR CAA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCGTGGCTCAATTAGCTTaGGCTTTGCCAGGAGCACGG +
Preference number: 5 (lower is better)
Translates to: FGKHPEFANDKASPHTRAVAQLA*ALPGAR
Trigger: CCGTGCTCCTGGCAAAGCCAAAGCTAATTGAGCCAC...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652315.1
CDS-3UTR CAA 90 bp CTGGAATCTGGTTCCCCCAATGCCAACAACGTCTGCTATCAGCTGGCTGACAGAGACAGCAGCCAACATTaGCTGAGCATTTACCGTGTG +
Preference number: 5 (lower is better)
Translates to: LESGSPNANNVCYQLADRDSSQH*LSIYRV
Trigger: CACACGGTAAATGCTCAGCAAATGTTGGCTGCTGTC...TCTGTCAGCCAGCTGATAGCAGACGTTGTTGGCATTGGGGGAACCAGATTCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CAA 90 bp GTTACAGCACTTGAGAATCTCGTAACACAGAGCCGCACACATGTCCGCTCTCCCGTCAGTGCGGAGCAATaGGAGGCTATGATGCTAAAG +
Preference number: 5 (lower is better)
Translates to: VTALENLVTQSRTHVRSPVSAEQ*EAMMLK
Trigger: CTTTAGCATCATAGCCTCCAATTGCTCCGCACTGAC...GGGAGAGCGGACATGTGTGCGGCTCTGTGTTACGAGATTCTCAAGTGCTGTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CAA 90 bp CTGAGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCTCAGAGTCTCAAGCTaGATTCCAGAACTAGAGTCC +
Preference number: 5 (lower is better)
Translates to: LRSHRHPGPLFQGMAEGFLRVSS*IPELES
Trigger: GGACTCTAGTTCTGGAATCAAGCTTGAGACTCTGAG...AAACCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CAA 90 bp ACAGAGCCGCACACATGTCCGCTCTCCCTTCATAGAATGTTGAGGGAAACTTATGTGGCTCAATTAGCTTaGGCTTTGCCAGCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: TEPHTCPLSLHRMLRETYVAQLA*ALPARR
Trigger: CCTCCTGGCTGGCAAAGCCAAAGCTAATTGAGCCAC...ATAAGTTTCCCTCAACATTCTATGAAGGGAGAGCGGACATGTGTGCGGCTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR CAA 90 bp AGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGGGAAGTTTATCCAACTaGACCACTTTGTTCGGAAGC +
Preference number: 5 (lower is better)
Translates to: RSHRHPGPLFQGMAEGFQGSLSN*TTLFGS
Trigger: GCTTCCGAACAAAGTGGTCAAGTTGGATAAACTTCC...CTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp CATGAGAGGATTATGTCCATGGTCGGCCAGGAGCTGGTTCTTAAACGCCAATGTGCAGCATCCTCATCTTaGTCGACCTCCTCGTCAACT +
Preference number: 5 (lower is better)
Translates to: HERIMSMVGQELVLKRQCAASSS*STSSST
Trigger: AGTTGACGAGGAGGTCGACAAAGATGAGGATGCTGC...ACATTGGCGTTTAAGAACCAGCTCCTGGCCGACCATGGACATAATCCTCTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp ATGACTGGTGCAGAACATCTGCGTCCGAGTGGCCATAGCCATTGTCTACAGAAAGCAGCATCCTCATCTTaGTCGACCTCCTCGTCAACT +
Preference number: 5 (lower is better)
Translates to: MTGAEHLRPSGHSHCLQKAASSS*STSSST
Trigger: AGTTGACGAGGAGGTCGACAAAGATGAGGATGCTGC...TTTCTGTAGACAATGGCTATGGCCACTCGGACGCAGATGTTCTGCACCAGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CAA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTATGGCACTGTTCATGTaGCCTTTGTACAGCCAGCCA +
Preference number: 5 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFMALFM*PLYSQP
Trigger: TGGCTGGCTGTACAAAGGCAACATGAACAGTGCCAT...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCATTGCAGCTTCAAAGTaGAGCTGGAGGATCTTATTT +
Preference number: 5 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTIAASK*SWRILF
Trigger: AAATAAGATCCTCCAGCTCAACTTTGAAGCTGCAAT...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GTAGGCCCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCGCTTTCACTTTTCAGTTaGATTTCTGCTTCTCTTGCA +
Preference number: 5 (lower is better)
Translates to: VGPVQRVIQMGQPLKIPPLSLFS*ISASLA
Trigger: TGCAAGAGAAGCAGAAATCAAACTGAAAAGTGAAAG...CGGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGGGCCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCGCAGAAATCTTCCGGTaGTATTTTATGTCAAACAGG +
Preference number: 5 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTAEIFR*YFMSNR
Trigger: CCTGTTTGACATAAAATACAACCGGAAGATTTCTGC...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TGTAGGCCCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCTTGAGCATGTCATCATaGGATAGCTTATTGCTGTCT +
Preference number: 5 (lower is better)
Translates to: CRPGAACHTDGPASQNPSLSMSS*DSLLLS
Trigger: AGACAGCAATAAGCTATCCAATGATGACATGCTCAA...GGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGGGCCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCAAGTCTGCAAGTAACTaGAGCATGTCATCATTGGAT +
Preference number: 5 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTKSASN*SMSSLD
Trigger: ATCCAATGATGACATGCTCAAGTTACTTGCAGACTT...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTCTTCCTTTACTTGAGTaGTCACAGCTGACATGGAAG +
Preference number: 5 (lower is better)
Translates to: GVTGIRDLYFRAWLRGFSLPLLE*SQLTWK
Trigger: CTTCCATGTCAGCTGTGACAACTCAAGTAAAGGAAG...ACTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp AGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGATCGTGGTCATGGATTaGGTCAGTTCTTCATGCACT +
Preference number: 5 (lower is better)
Translates to: RSHRHPGPLFQGMAEGFQIVVMD*VSSSCT
Trigger: AGTGCATGAAGAACTGACCAAATCCATGACCACGAT...CTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp ATCCTGAGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGGAGGTCTTGGTATCTTaGAATCCTGCCTTTTCCAAA +
Preference number: 5 (lower is better)
Translates to: ILRSHRHPGPLFQGMAEGEVLVS*NPAFSK
Trigger: TTTGGAAAAGGCAGGATTCAAAGATACCAAGACCTC...CCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCTCAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGGTCAAGCTGGAGGTCTaGGTATCTTTGAATCCTGCC +
Preference number: 5 (lower is better)
Translates to: GKHPEFANDKASPHTRAMVKLEV*VSLNPA
Trigger: GGCAGGATTCAAAGATACCAAGACCTCCAGCTTGAC...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTGTCAAGCTGGAGGTCTaGGTATCTTTGAATCCTGCC +
Preference number: 5 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFVKLEV*VSLNPA
Trigger: GGCAGGATTCAAAGATACCAAGACCTCCAGCTTGAC...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp CACACACGGGCCATGAGATGTAATCACACGACCGAAGACGAGCTGGTCATCCCGTGTTTGGAGTTGAGGTaGTATATGGAGAAGCAATGC +
Preference number: 5 (lower is better)
Translates to: HTRAMRCNHTTEDELVIPCLELR*YMEKQC
Trigger: GCATTGCTTCTCCATATACAACCTCAACTCCAAACA...CGGGATGACCAGCTCGTCTTCGGTCGTGTGATTACATCTCATGGCCCGTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376460.5
ENST00000652315.1
CDS-3UTR CAA 90 bp TCCTGCATCCCCACGTCTTCCATCATGGAGGCCTCCTCGTCGATGTTTGGGGTAGCATTTCTCACACTGTaGATGTTTGGAGTTGAGGTT +
Preference number: 5 (lower is better)
Translates to: SCIPTSSIMEASSSMFGVAFLTL*MFGVEV
Trigger: AACCTCAACTCCAAACATCAACAGTGTGAGAAATGC...TACCCCAAACATCGACGAGGAGGCCTCCATGATGGAAGACGTGGGGATGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp CTCGGCTTTCCAGAGTCCATCTGCGCACTGCTCAAGGAGCTCCATCAGCACATCCAATGTGCTACTTTGTaGGTGCTTATCCAGGGAATT +
Preference number: 5 (lower is better)
Translates to: LGFPESICALLKELHQHIQCATL*VLIQGI
Trigger: AATTCCCTGGATAAGCACCAACAAAGTAGCACATTG...GATGTGCTGATGGAGCTCCTTGAGCAGTGCGCAGATGGACTCTGGAAAGCCGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp CACACACGGGCCATGAGATGTAATCACACGACCGAAGACGAGCTGGTCATCCCGGACAGATATGATGACTaGCAAATGTGTCCGGACAAA +
Preference number: 5 (lower is better)
Translates to: HTRAMRCNHTTEDELVIPDRYDD*QMCPDK
Trigger: TTTGTCCGGACACATTTGCAAGTCATCATATCTGTC...CGGGATGACCAGCTCGTCTTCGGTCGTGTGATTACATCTCATGGCCCGTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCCTGTTGGCACAGTTGTaGATGATGGACAGGGACTGC +
Preference number: 5 (lower is better)
Translates to: FGKHPEFANDKASPHTRALLAQL*MMDRDC
Trigger: GCAGTCCCTGTCCATCATCAACAACTGTGCCAACAG...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp CTTCAAGTAATGACTGGTGCAGAACATCTGCGTCCGAGTGGCCATAGCTGTGGTTCACTGTTGGCACAGTaGTTGATGATGGACAGGGAC +
Preference number: 5 (lower is better)
Translates to: LQVMTGAEHLRPSGHSCGSLLAQ*LMMDRD
Trigger: GTCCCTGTCCATCATCAACAACTGTGCCAACAGTGA...ACCACAGCTATGGCCACTCGGACGCAGATGTTCTGCACCAGTCATTACTTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR CAA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGTCACTGTTGGCACAGTaGTTGATGATGGACAGGGAC +
Preference number: 5 (lower is better)
Translates to: GKHPEFANDKASPHTRAMSLLAQ*LMMDRD
Trigger: GTCCCTGTCCATCATCAACAACTGTGCCAACAGTGA...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATCACACGACCTCACTGTTGGCACAGTaGTTGATGATGGACAGGGAC +
Preference number: 5 (lower is better)
Translates to: ANDKASPHTRAMRCNHTTSLLAQ*LMMDRD
Trigger: GTCCCTGTCCATCATCAACAACTGTGCCAACAGTGA...GGTCGTGTGATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GTTACAGCACTTGAGAATCTCGTAACACAGAGCCGCACACATGTCCGCTCTCCCATAAGCCGGTCACTGTaGGCACAGTTGTTGATGATG +
Preference number: 5 (lower is better)
Translates to: VTALENLVTQSRTHVRSPISRSL*AQLLMM
Trigger: CATCATCAACAACTGTGCCAACAGTGACCGGCTTAT...GGGAGAGCGGACATGTGTGCGGCTCTGTGTTACGAGATTCTCAAGTGCTGTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTGAGAGATCGCCATTTTaGACATGGATCCTGGCCATG +
Preference number: 5 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFERSPF*TWILAM
Trigger: CATGGCCAGGATCCATGTCAAAAATGGCGATCTCTC...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACGTGGCTCAATTAGCTTaGGCTTTGCCGGCACAGGGC +
Preference number: 5 (lower is better)
Translates to: VIGFGKHPEFANDKASPHVAQLA*ALPAQG
Trigger: GCCCTGTGCCGGCAAAGCCAAAGCTAATTGAGCCAC...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
CDS-3UTR CAA 90 bp GGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGTCATCCCGTGAACCATaGTGCTTGTTGGAGTCCCAC +
Preference number: 5 (lower is better)
Translates to: GFGKHPEFANDKASPHTRSSREP*CLLESH
Trigger: GTGGGACTCCAACAAGCACAATGGTTCACGGGATGA...CCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGTCATCCCGTGAACCATaGTGCTTGTTGGAGTCCCAC +
Preference number: 5 (lower is better)
Translates to: ALESILSLQMTKQVPTHGSSREP*CLLESH
Trigger: GTGGGACTCCAACAAGCACAATGGTTCACGGGATGA...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCGTGTCTACCACACCTTaGTTAAGACACAATGAAAAC +
Preference number: 5 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTVSTTP*LRHNEN
Trigger: GTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACAC...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGACAATTAGCTTTGGCTTaGCCAGGAGCACGGAGCCGC +
Preference number: 5 (lower is better)
Translates to: FQGMAEGFQLLTITSRKRQLALA*PGARSR
Trigger: GCGGCTCCGTGCTCCTGGCAAAGCCAAAGCTAATTG...TCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427887.2
CDS-3UTR CAA 90 bp GGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTGAGGGGTTTCAGTTGTaGACTATCACAAGCAGGAAA +
Preference number: 5 (lower is better)
Translates to: GVTGIRDLYFRAWLRGFSEGFQL*TITSRK
Trigger: TTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTC...ACTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTGCCGGCTCCTGTGATTaGCTTGGGATTGTTCTGAAT +
Preference number: 5 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFAGSCD*LGIVLN
Trigger: ATTCAGAACAATCCCAAGCAAATCACAGGAGCCGGC...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448493.7
CDS CCA 90 bp GTCCCCCTCACTGTGTTATTGTGTGTAGGAGAACAGGGACATGCATaGACTATCATCGACTGCATGCTGCTGGGTGACTTCAAAGTGACA +
Preference number: 5 (lower is better)
Translates to: VPLTVLLCVGEQGHA*TIIDCMLLGDFKVT
Trigger: TGTCACTTTGAAGTCACCCAGCAGCATGCAGTCGATGATAGTCCATGCATGTCCCTGTTCTCCTACACACAATAACACAGTGAGGGGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340449.7
CDS-3UTR CAA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGTCCAACTTGACCACTTaGTTCGGAAGCTGTCGAAAC +
Preference number: 5 (lower is better)
Translates to: GKHPEFANDKASPHTRAMSNLTT*FGSCRN
Trigger: GTTTCGACAGCTTCCGAACAAAGTGGTCAAGTTGGA...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTTCCAACTTGACCACTTaGTTCGGAAGCTGTCGAAAC +
Preference number: 5 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFSNLTT*FGSCRN
Trigger: GTTTCGACAGCTTCCGAACAAAGTGGTCAAGTTGGA...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCTGTTCATGTTGCCTTaGTACAGCCAGCCATGCTTG +
Preference number: 5 (lower is better)
Translates to: ALESILSLQMTKQVPTHGLFMLP*YSQPCL
Trigger: CAAGCATGGCTGGCTGTACAAAGGCAACATGAACAG...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATCACACGACCGGATCCATCGCCAAGTaGAATCAGGTGGAAAAATCG +
Preference number: 5 (lower is better)
Translates to: ANDKASPHTRAMRCNHTTGSIAK*NQVEKS
Trigger: CGATTTTTCCACCTGATTCAACTTGGCGATGGATCC...GGTCGTGTGATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCAGGAATCCAGAAATATaGATCCTTTTGGTTCTTTGG +
Preference number: 5 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTRNPEI*ILLVLW
Trigger: CCAAAGAACCAAAAGGATCAATATTTCTGGATTCCT...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCCTTTCACTTTTCAGTTaGATTTCTGCTTCTCTTGCA +
Preference number: 5 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTLSLFS*ISASLA
Trigger: TGCAAGAGAAGCAGAAATCAAACTGAAAAGTGAAAG...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GAAGTAGAGCAGCTGGGAGGCCTCCGTCCTGATGGAGCTCAGCTTGGAGTTACATTGAGCATGTCATCATaGGATAGCTTATTGCTGTCT +
Preference number: 5 (lower is better)
Translates to: EVEQLGGLRPDGAQLGVTLSMSS*DSLLLS
Trigger: AGACAGCAATAAGCTATCCAATGATGACATGCTCAA...TGTAACTCCAAGCTGAGCTCCATCAGGACGGAGGCCTCCCAGCTGCTCTACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp GAAGTAGAGCAGCTGGGAGGCCTCCGTCCTGATGGAGCTCAGCTTGGAGTTACAAAGTCTGCAAGTAACTaGAGCATGTCATCATTGGAT +
Preference number: 5 (lower is better)
Translates to: EVEQLGGLRPDGAQLGVTKSASN*SMSSLD
Trigger: ATCCAATGATGACATGCTCAAGTTACTTGCAGACTT...TGTAACTCCAAGCTGAGCTCCATCAGGACGGAGGCCTCCCAGCTGCTCTACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp ATCCTGAGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGATTGTAATGTCTAGATaGCCTAAAATCACTGGGAGC +
Preference number: 5 (lower is better)
Translates to: ILRSHRHPGPLFQGMAEGIVMSR*PKITGS
Trigger: GCTCCCAGTGATTTTAGGCAATCTAGACATTACAAT...CCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCTCAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp TCCTGCATCCCCACGTCTTCCATCATGGAGGCCTCCTCGTCGATGTTTGGGGTAATTGTAATGTCTAGATaGCCTAAAATCACTGGGAGC +
Preference number: 5 (lower is better)
Translates to: SCIPTSSIMEASSSMFGVIVMSR*PKITGS
Trigger: GCTCCCAGTGATTTTAGGCAATCTAGACATTACAAT...TACCCCAAACATCGACGAGGAGGCCTCCATGATGGAAGACGTGGGGATGCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp CTGGAATCTGGTTCCCCCAATGCCAACAACGTCTGCTATCAGCTGGCTGACAGAAAGGCTGAGTGTGTTTaGGTATGCAGGGCACAAATT +
Preference number: 5 (lower is better)
Translates to: LESGSPNANNVCYQLADRKAECV*VCRAQI
Trigger: AATTTGTGCCCTGCATACCAAAACACACTCAGCCTT...TCTGTCAGCCAGCTGATAGCAGACGTTGTTGGCATTGGGGGAACCAGATTCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAAATCGGCAGAAGGCTaGAGAATCGTGGTCATGGAT +
Preference number: 5 (lower is better)
Translates to: GKHPEFANDKASPHTRAMKSAEG*RIVVMD
Trigger: ATCCATGACCACGATTCTCAAGCCTTCTGCCGATTT...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGATTCAAAGAGGGTCTTaGGGTCTCCAGGAGCAAAAC +
Preference number: 5 (lower is better)
Translates to: GKHPEFANDKASPHTRAMIQRGS*GLQEQN
Trigger: GTTTTGCTCCTGGAGACCCAAAGACCCTCTTTGAAT...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp CTTCAAGTAATGACTGGTGCAGAACATCTGCGTCCGAGTGGCCATAGCTGTGGTTCCCAATGTGCTACTTaGTTGGTGCTTATCCAGGGA +
Preference number: 5 (lower is better)
Translates to: LQVMTGAEHLRPSGHSCGSQCAT*LVLIQG
Trigger: TCCCTGGATAAGCACCAACAAAGTAGCACATTGGGA...ACCACAGCTATGGCCACTCGGACGCAGATGTTCTGCACCAGTCATTACTTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR CAA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGTCCCAATGTGCTACTTaGTTGGTGCTTATCCAGGGA +
Preference number: 5 (lower is better)
Translates to: GKHPEFANDKASPHTRAMSQCAT*LVLIQG
Trigger: TCCCTGGATAAGCACCAACAAAGTAGCACATTGGGA...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATCACACGACCTCCCAATGTGCTACTTaGTTGGTGCTTATCCAGGGA +
Preference number: 5 (lower is better)
Translates to: ANDKASPHTRAMRCNHTTSQCAT*LVLIQG
Trigger: TCCCTGGATAAGCACCAACAAAGTAGCACATTGGGA...GGTCGTGTGATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp AGGGACTGCTGGAATCTGGTTCCCCCAATGCCAACAACGTCTGCTATCAGCTGGGACAGATATGATGACTaGCAAATGTGTCCGGACAAA +
Preference number: 5 (lower is better)
Translates to: RDCWNLVPPMPTTSAISWDRYDD*QMCPDK
Trigger: TTTGTCCGGACACATTTGCAAGTCATCATATCTGTC...CCAGCTGATAGCAGACGTTGTTGGCATTGGGGGAACCAGATTCCAGCAGTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp TGGGAGGCCTCCGTCCTGATGGAGCTCAGCTTGGAGTTACAGCACTTGAGAATCGACAGATATGATGACTaGCAAATGTGTCCGGACAAA +
Preference number: 5 (lower is better)
Translates to: WEASVLMELSLELQHLRIDRYDD*QMCPDK
Trigger: TTTGTCCGGACACATTTGCAAGTCATCATATCTGTC...GATTCTCAAGTGCTGTAACTCCAAGCTGAGCTCCATCAGGACGGAGGCCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGTCACTGTTGGCACAGTaGTTGATGATGGACAGGGAC +
Preference number: 5 (lower is better)
Translates to: ALESILSLQMTKQVPTHGSLLAQ*LMMDRD
Trigger: GTCCCTGTCCATCATCAACAACTGTGCCAACAGTGA...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp AGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGGAAAGCATCCTGAGTTaGCAAATGACAAAGCAAGTC +
Preference number: 5 (lower is better)
Translates to: RSHRHPGPLFQGMAEGFQESILS*QMTKQV
Trigger: GACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTC...CTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CAA 90 bp TCCCCCAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTGGTTCTAAACTGCTaGACTAGTTTTAAGCTCACA +
Preference number: 5 (lower is better)
Translates to: SPRHQCQCSPPCHVDPRTLVLNC*TSFKLT
Trigger: TGTGAGCTTAAAACTAGTCAAGCAGTTTAGAACCAA...GGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TGTAGGCCCGGTGCAGCGTGTCATACAGATGGGCCAGCCTCTCAAAATCCCTCCTGTTTGGAGTTGAGGTaGTATATGGAGAAGCTAAAT +
Preference number: 5 (lower is better)
Translates to: CRPGAACHTDGPASQNPSCLELR*YMEKLN
Trigger: ATTTAGCTTCTCCATATACAACCTCAACTCCAAACA...GGAGGGATTTTGAGAGGCTGGCCCATCTGTATGACACGCTGCACCGGGCCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CAA 90 bp GGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGTCCAACTTGACCACTTaGTTCGGAAGCTGTCGAAAC +
Preference number: 5 (lower is better)
Translates to: GFGKHPEFANDKASPHTRSNLTT*FGSCRN
Trigger: GTTTCGACAGCTTCCGAACAAAGTGGTCAAGTTGGA...CCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GTCAGTGCGGAGCAATTGGAGGCTATGATGCTAAAGATCCCCAGTGGCCTATCTGGAAGTTTATCCAACTaGACCACTTTGTTCGGAAGC +
Preference number: 5 (lower is better)
Translates to: VSAEQLEAMMLKIPSGLSGSLSN*TTLFGS
Trigger: GCTTCCGAACAAAGTGGTCAAGTTGGATAAACTTCC...AGATAGGCCACTGGGGATCTTTAGCATCATAGCCTCCAATTGCTCCGCACTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CAA 90 bp GGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCGCAGCATCCTCATCTTaGTCGACCTCCTCGTCAACT +
Preference number: 5 (lower is better)
Translates to: GMAEGFQLLTITSRKRILAASSS*STSSST
Trigger: AGTTGACGAGGAGGTCGACAAAGATGAGGATGCTGC...GAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACGCAGCATCCTCATCTTaGTCGACCTCCTCGTCAACT +
Preference number: 5 (lower is better)
Translates to: VIGFGKHPEFANDKASPHAASSS*STSSST
Trigger: AGTTGACGAGGAGGTCGACAAAGATGAGGATGCTGC...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGGGATCCATCGCCAAGTaGAATCAGGTGGAAAAATCG +
Preference number: 5 (lower is better)
Translates to: ALESILSLQMTKQVPTHGGSIAK*NQVEKS
Trigger: CGATTTTTCCACCTGATTCAACTTGGCGATGGATCC...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TGGGAGGCCTCCGTCCTGATGGAGCTCAGCTTGGAGTTACAGCACTTGAGAATCATTGCAGCTTCAAAGTaGAGCTGGAGGATCTTATTT +
Preference number: 5 (lower is better)
Translates to: WEASVLMELSLELQHLRIIAASK*SWRILF
Trigger: AAATAAGATCCTCCAGCTCAACTTTGAAGCTGCAAT...GATTCTCAAGTGCTGTAACTCCAAGCTGAGCTCCATCAGGACGGAGGCCTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp CTGAGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGTTTATTGCAGCTTCAAAGTaGAGCTGGAGGATCTTATTT +
Preference number: 5 (lower is better)
Translates to: LRSHRHPGPLFQGMAEGFIAASK*SWRILF
Trigger: AAATAAGATCCTCCAGCTCAACTTTGAAGCTGCAAT...AAACCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp GAGAGATCGCCATTTTTGACATGGATCCTGGCCATGCTGTCGAGCCACGTCTTCGCCATTTCGCTTTTCTaGCATTGCAGCTTCAAAGTT +
Preference number: 5 (lower is better)
Translates to: ERSPFLTWILAMLSSHVFAISLF*HCSFKV
Trigger: AACTTTGAAGCTGCAATGCAAGAAAAGCGAAATGGC...GAAGACGTGGCTCGACAGCATGGCCAGGATCCATGTCAAAAATGGCGATCTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp GAAGTAGAGCAGCTGGGAGGCCTCCGTCCTGATGGAGCTCAGCTTGGAGTTACACTTTCACTTTTCAGTTaGATTTCTGCTTCTCTTGCA +
Preference number: 5 (lower is better)
Translates to: EVEQLGGLRPDGAQLGVTLSLFS*ISASLA
Trigger: TGCAAGAGAAGCAGAAATCAAACTGAAAAGTGAAAG...TGTAACTCCAAGCTGAGCTCCATCAGGACGGAGGCCTCCCAGCTGCTCTACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACCCAGGAGTAGCCAACTaGGGTTTCAACGACATCCCT +
Preference number: 5 (lower is better)
Translates to: VIGFGKHPEFANDKASPHPGVAN*GFNDIP
Trigger: AGGGATGTCGTTGAAACCCAAGTTGGCTACTCCTGG...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGATTTTCAGCAGTGGCTaGCCTCCATCTACCCATTTA +
Preference number: 5 (lower is better)
Translates to: GKHPEFANDKASPHTRAMIFSSG*PPSTHL
Trigger: TAAATGGGTAGATGGAGGCAAGCCACTGCTGAAAAT...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATCACACGACCATTTTCAGCAGTGGCTaGCCTCCATCTACCCATTTA +
Preference number: 5 (lower is better)
Translates to: ANDKASPHTRAMRCNHTTIFSSG*PPSTHL
Trigger: TAAATGGGTAGATGGAGGCAAGCCACTGCTGAAAAT...GGTCGTGTGATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGATCGTGGTCATGGATTaGGTCAGTTCTTCATGCACT +
Preference number: 5 (lower is better)
Translates to: GKHPEFANDKASPHTRAMIVVMD*VSSSCT
Trigger: AGTGCATGAAGAACTGACCAAATCCATGACCACGAT...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGTACTTCAGTAGTTTGTaGCTGGTGAGGAAATCGGCA +
Preference number: 5 (lower is better)
Translates to: GKHPEFANDKASPHTRAMYFSSL*LVRKSA
Trigger: TGCCGATTTCCTCACCAGCAACAAACTACTGAAGTA...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTTACTTCAGTAGTTTGTaGCTGGTGAGGAAATCGGCA +
Preference number: 5 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFYFSSL*LVRKSA
Trigger: TGCCGATTTCCTCACCAGCAACAAACTACTGAAGTA...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GTCAGTGCGGAGCAATTGGAGGCTATGATGCTAAAGATCCCCAGTGGCCTATCTTACTTCAGTAGTTTGTaGCTGGTGAGGAAATCGGCA +
Preference number: 5 (lower is better)
Translates to: VSAEQLEAMMLKIPSGLSYFSSL*LVRKSA
Trigger: TGCCGATTTCCTCACCAGCAACAAACTACTGAAGTA...AGATAGGCCACTGGGGATCTTTAGCATCATAGCCTCCAATTGCTCCGCACTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CAA 90 bp AACTGTATGATCCTGAGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGATTCAAAGAGGGTCTTaGGGTCTCCAGGAGCAAAAC +
Preference number: 5 (lower is better)
Translates to: NCMILRSHRHPGPLFQGMIQRGS*GLQEQN
Trigger: GTTTTGCTCCTGGAGACCCAAAGACCCTCTTTGAAT...CATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCTCAGGATCATACAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATTCAAAGAGGGTCTTaGGGTCTCCAGGAGCAAAAC +
Preference number: 5 (lower is better)
Translates to: FGKHPEFANDKASPHTRAIQRGS*GLQEQN
Trigger: GTTTTGCTCCTGGAGACCCAAAGACCCTCTTTGAAT...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp AAGAATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACTCCTTGTGCAGGCTGTaGTCCAGGGTGCTTCCCTTC +
Preference number: 5 (lower is better)
Translates to: KNTQESNLDFKVLPHKCDSLCRL*SRVLPF
Trigger: GAAGGGAAGCACCCTGGACAACAGCCTGCACAAGGA...GTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTAGCGCCCAGCAGGTCCTaGTGCAGGCTGTTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLAPSRS*CRLLSR
Trigger: CCTGGACAACAGCCTGCACAAGGACCTGCTGGGCGC...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAAGCGCCCAGCAGGTCCTaGTGCAGGCTGTTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKAPSRS*CRLLSR
Trigger: CCTGGACAACAGCCTGCACAAGGACCTGCTGGGCGC...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GTTCCCTTAGGACTGCTGAACAATAAACACCCAGCAGCCACCCCAAATGGTCAGACCTCAGTAGCAATGTaGGCTTCAAGTAATGACTGG +
Preference number: 5 (lower is better)
Translates to: VPLGLLNNKHPAATPNGQTSVAM*ASSNDW
Trigger: CCAGTCATTACTTGAAGCCAACATTGCTACTGAGGT...CTGACCATTTGGGGTGGCTGCTGGGTGTTTATTGTTCAGCAGTCCTAAGGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448493.7
CDS-3UTR CAA 90 bp GGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGATAAGCCGGTCACTGTaGGCACAGTTGTTGATGATG +
Preference number: 5 (lower is better)
Translates to: GFGKHPEFANDKASPHTRISRSL*AQLLMM
Trigger: CATCATCAACAACTGTGCCAACAGTGACCGGCTTAT...CCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp CAAAGGCTGAGAAGCTGTCAGTGTCCAACAGGTACACACCACCCATTTGTAGTGATAAGCCGGTCACTGTaGGCACAGTTGTTGATGATG +
Preference number: 5 (lower is better)
Translates to: QRLRSCQCPTGTHHPFVVISRSL*AQLLMM
Trigger: CATCATCAACAACTGTGCCAACAGTGACCGGCTTAT...CACTACAAATGGGTGGTGTGTACCTGTTGGACACTGACAGCTTCTCAGCCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CAA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGATCAGCACATCCTCGTaGAAATGGACATCCTGCATC +
Preference number: 5 (lower is better)
Translates to: ALESILSLQMTKQVPTHGISTSS*KWTSCI
Trigger: GATGCAGGATGTCCATTTCAACGAGGATGTGCTGAT...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp ATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACAGAAGGCGGTGCATCCTaGTCTAAACACGCCTTTCCG +
Preference number: 5 (lower is better)
Translates to: IGFGKHPEFANDKASPHTEGGAS*SKHAFP
Trigger: CGGAAAGGCGTGTTTAGACAAGGATGCACCGCCTTC...TGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400228.6
ENST00000448493.7
ENST00000630992.2
CDS-3UTR CAA 90 bp GGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTATCACCAGTTCCTTTTaGACACTTCTACTACTTGTC +
Preference number: 5 (lower is better)
Translates to: GVTGIRDLYFRAWLRGFSITSSF*TLLLLV
Trigger: GACAAGTAGTAGAAGTGTCAAAAAGGAACTGGTGAT...ACTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAAGGATGGTGCGCCGTTaGCACTGCTCTTCCACCCCG +
Preference number: 5 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKRMVRR*HCSSTP
Trigger: CGGGGTGGAAGAGCAGTGCAAACGGCGCACCATCCT...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAGGATGGTGCGCCGTTaGCACTGCTCTTCCACCCCG +
Preference number: 5 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNERMVRR*HCSSTP
Trigger: CGGGGTGGAAGAGCAGTGCAAACGGCGCACCATCCT...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCGCTGAGGGGTTTCAGTaGTTGACTATCACAAGCAGG +
Preference number: 5 (lower is better)
Translates to: GPLFQGMAEGFQLLTITSAEGFQ*LTITSR
Trigger: CCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGC...GCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp CTTTGCCTCAGGTCACTTAATGAAAGAACTCCTAGTGACCTCATAGGGCAGAGGGTGGCTCAATTAGCTTaGGCTTTGCCTCAGGTCACT +
Preference number: 5 (lower is better)
Translates to: LCLRSLNERTPSDLIGQRVAQLA*ALPQVT
Trigger: AGTGACCTGAGGCAAAGCCAAAGCTAATTGAGCCAC...CCTCTGCCCTATGAGGTCACTAGGAGTTCTTTCATTAAGTGACCTGAGGCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479769.1
CDS-3UTR CAA 90 bp ATTAGAATCTTGATTTGTGTCACGTGTTTTTCTCTCAGAGGTGGCCGCTCTTCTCGGGTTTTCACCATGTaGGCCAGGCTGGTGTCGAAC +
Preference number: 5 (lower is better)
Translates to: IRILICVTCFSLRGGRSSRVFTM*ARLVSN
Trigger: GTTCGACACCAGCCTGGCCAACATGGTGAAAACCCG...AGAAGAGCGGCCACCTCTGAGAGAAAAACACGTGACACAAATCAAGATTCTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS TCA 90 bp GCAGGAGATTTACATGTGGCTCTACTGGAAAACTGCCGGCTCCTGTaGTTTGCTTGGGATTGTTCTGAATCTCAGAACCTGCCCAAAATG +
Preference number: 5 (lower is better)
Translates to: AGDLHVALLENCRLL*FAWDCSESQNLPKM
Trigger: CATTTTGGGCAGGTTCTGAGATTCAGAACAATCCCAAGCAAATCACAGGAGCCGGCAGTTTTCCAGTAGAGCCACATGTAAATCTCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448493.7
CDS-3UTR CAA 90 bp CTCCTTCGCCATTTCCCTGTAGTTGGCTTTCATTTCTTCCTGATACTCGAGCTGTCCAACTTGACCACTTaGTTCGGAAGCTGTCGAAAC +
Preference number: 5 (lower is better)
Translates to: LLRHFPVVGFHFFLILELSNLTT*FGSCRN
Trigger: GTTTCGACAGCTTCCGAACAAAGTGGTCAAGTTGGA...CAGCTCGAGTATCAGGAAGAAATGAAAGCCAACTACAGGGAAATGGCGAAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CAA 90 bp TTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAGCAGCATCCTCATCTTaGTCGACCTCCTCGTCAACT +
Preference number: 5 (lower is better)
Translates to: LFQGMAEGFQLLTITSRKAASSS*STSSST
Trigger: AGTTGACGAGGAGGTCGACAAAGATGAGGATGCTGC...TTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACCTGTTCATGTTGCCTTaGTACAGCCAGCCATGCTTG +
Preference number: 5 (lower is better)
Translates to: VIGFGKHPEFANDKASPHLFMLP*YSQPCL
Trigger: CAAGCATGGCTGGCTGTACAAAGGCAACATGAACAG...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACATGGCACTGTTCATGTaGCCTTTGTACAGCCAGCCA +
Preference number: 5 (lower is better)
Translates to: VIGFGKHPEFANDKASPHMALFM*PLYSQP
Trigger: TGGCTGGCTGTACAAAGGCAACATGAACAGTGCCAT...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp CTGAGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCTGAGGGGTTTAGGAATCCAGAAATATaGATCCTTTTGGTTCTTTGG +
Preference number: 5 (lower is better)
Translates to: LRSHRHPGPLFQGMAEGFRNPEI*ILLVLW
Trigger: CCAAAGAACCAAAAGGATCAATATTTCTGGATTCCT...AAACCCCTCAGCCATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp AATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACACGCTTTGGCATGCCTGCTaGGCATTCTTCAGCACCTTC +
Preference number: 5 (lower is better)
Translates to: NTQESNLDFKVLPHKCDTLWHAC*AFFSTF
Trigger: GAAGGTGCTGAAGAATGCCAAGCAGGCATGCCAAAG...CGTGTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp CTGGAATCTGGTTCCCCCAATGCCAACAACGTCTGCTATCAGCTGGCTGACAGAATTGTAATGTCTAGATaGCCTAAAATCACTGGGAGC +
Preference number: 5 (lower is better)
Translates to: LESGSPNANNVCYQLADRIVMSR*PKITGS
Trigger: GCTCCCAGTGATTTTAGGCAATCTAGACATTACAAT...TCTGTCAGCCAGCTGATAGCAGACGTTGTTGGCATTGGGGGAACCAGATTCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCTTCCTTTACTTGAGTaGTCACAGCTGACATGGAAG +
Preference number: 5 (lower is better)
Translates to: ALESILSLQMTKQVPTHGLPLLE*SQLTWK
Trigger: CTTCCATGTCAGCTGTGACAACTCAAGTAAAGGAAG...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAACCAGGAGTAGCCAACTaGGGTTTCAACGACATCCCT +
Preference number: 5 (lower is better)
Translates to: LFQGMAEGFQLLTITSRKPGVAN*GFNDIP
Trigger: AGGGATGTCGTTGAAACCCAAGTTGGCTACTCCTGG...TTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp GTGCTTAATAAGCCGGTCACTGTTGGCACAGTTGTTGATGATGGACAGGGACTGATCGTGGTCATGGATTaGGTCAGTTCTTCATGCACT +
Preference number: 5 (lower is better)
Translates to: VLNKPVTVGTVVDDGQGLIVVMD*VSSSCT
Trigger: AGTGCATGAAGAACTGACCAAATCCATGACCACGAT...CAGTCCCTGTCCATCATCAACAACTGTGCCAACAGTGACCGGCTTATTAAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp ACAGGCTGGTTGTTTTCAGATCTCAGTAGGCAAATGAGCTGCCATGGACTGGGAATCGTGGTCATGGATTaGGTCAGTTCTTCATGCACT +
Preference number: 5 (lower is better)
Translates to: TGWLFSDLSRQMSCHGLGIVVMD*VSSSCT
Trigger: AGTGCATGAAGAACTGACCAAATCCATGACCACGAT...TCCCAGTCCATGGCAGCTCATTTGCCTACTGAGATCTGAAAACAACCAGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CAA 90 bp GCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATCACACGACCGAGGTCTTGGTATCTTaGAATCCTGCCTTTTCCAAA +
Preference number: 5 (lower is better)
Translates to: ANDKASPHTRAMRCNHTTEVLVS*NPAFSK
Trigger: TTTGGAAAAGGCAGGATTCAAAGATACCAAGACCTC...GGTCGTGTGATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTGAGGTCTTGGTATCTTaGAATCCTGCCTTTTCCAAA +
Preference number: 5 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFEVLVS*NPAFSK
Trigger: TTTGGAAAAGGCAGGATTCAAAGATACCAAGACCTC...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAGTCAAGCTGGAGGTCTaGGTATCTTTGAATCCTGCC +
Preference number: 5 (lower is better)
Translates to: FQGMAEGFQLLTITSRKRVKLEV*VSLNPA
Trigger: GGCAGGATTCAAAGATACCAAGACCTCCAGCTTGAC...TCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp GTGCTTAATAAGCCGGTCACTGTTGGCACAGTTGTTGATGATGGACAGGGACTGTTGCCTGATGGCTCCTaGAAGCATATCTGTCATCAA +
Preference number: 5 (lower is better)
Translates to: VLNKPVTVGTVVDDGQGLLPDGS*KHICHQ
Trigger: TTGATGACAGATATGCTTCAAGGAGCCATCAGGCAA...CAGTCCCTGTCCATCATCAACAACTGTGCCAACAGTGACCGGCTTATTAAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp GTTCACCAACTATTGGCTCCAAGACACTTTCAGAGTGATGGTGGAGAGAAGCCCTTGCCTGATGGCTCCTaGAAGCATATCTGTCATCAA +
Preference number: 5 (lower is better)
Translates to: VHQLLAPRHFQSDGGEKPLPDGS*KHICHQ
Trigger: TTGATGACAGATATGCTTCAAGGAGCCATCAGGCAA...GGGCTTCTCTCCACCATCACTCTGAAAGTGTCTTGGAGCCAATAGTTGGTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CAA 90 bp GTGCTTAATAAGCCGGTCACTGTTGGCACAGTTGTTGATGATGGACAGGGACTGACCTCAGTAGCAATGTaGGCTTCAAGTAATGACTGG +
Preference number: 5 (lower is better)
Translates to: VLNKPVTVGTVVDDGQGLTSVAM*ASSNDW
Trigger: CCAGTCATTACTTGAAGCCAACATTGCTACTGAGGT...CAGTCCCTGTCCATCATCAACAACTGTGCCAACAGTGACCGGCTTATTAAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp ATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACTGTTGGCACAGTTGTaGATGATGGACAGGGACTGC +
Preference number: 5 (lower is better)
Translates to: IGFGKHPEFANDKASPHTLLAQL*MMDRDC
Trigger: GCAGTCCCTGTCCATCATCAACAACTGTGCCAACAG...TGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACTCACTGTTGGCACAGTaGTTGATGATGGACAGGGAC +
Preference number: 5 (lower is better)
Translates to: VIGFGKHPEFANDKASPHSLLAQ*LMMDRD
Trigger: GTCCCTGTCCATCATCAACAACTGTGCCAACAGTGA...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGACCGTGCGTATCCTTTaGGTTAAGTCCTTCACATCA +
Preference number: 5 (lower is better)
Translates to: GFGKHPEFANDKASPHTRTVRIL*VKSFTS
Trigger: TGATGTGAAGGACTTAACCAAAAGGATACGCACGGT...CCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAAGAAGGCGGTGCATCCTaGTCTAAACACGCCTCCCCG +
Preference number: 5 (lower is better)
Translates to: SSSRVSTTPLLRHNENFEEGGAS*SKHASP
Trigger: CGGGGAGGCGTGTTTAGACAAGGATGCACCGCCTTC...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000652315.1
CDS-3UTR CAA 90 bp AAGAATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACGAAGGCGGTGCATCCTaGTCTAAACACGCCTTTCCG +
Preference number: 5 (lower is better)
Translates to: KNTQESNLDFKVLPHKCDEGGAS*SKHAFP
Trigger: CGGAAAGGCGTGTTTAGACAAGGATGCACCGCCTTC...GTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CAA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACTCCAGATCCTTAGGGTaGACCTTGCCAGAATCCTGT +
Preference number: 5 (lower is better)
Translates to: VIGFGKHPEFANDKASPHSRSLG*TLPESC
Trigger: ACAGGATTCTGGCAAGGTCAACCCTAAGGATCTGGA...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACATGAAGCGGCGGATGTaGTGGGATCTCTCAAACTCT +
Preference number: 5 (lower is better)
Translates to: VIGFGKHPEFANDKASPHMKRRM*WDLSNS
Trigger: AGAGTTTGAGAGATCCCACAACATCCGCCGCTTCAT...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAAAGGATGGTGCGCCGTTaGCACTGCTCTTCCACCCCG +
Preference number: 5 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKRMVRR*HCSSTP
Trigger: CGGGGTGGAAGAGCAGTGCAAACGGCGCACCATCCT...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGCAGCTTCACTTTATaGTCAGGATATCGCTTTGTG +
Preference number: 5 (lower is better)
Translates to: GKHPEFANDKASPHTRAMSSFTL*SGYRFV
Trigger: CACAAAGCGATATCCTGACAATAAAGTGAAGCTGCT...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGGCAAGCTTCCACAAATaGCCTGAAAACTTCCTTAAG +
Preference number: 5 (lower is better)
Translates to: GKHPEFANDKASPHTRAMASFHK*PENFLK
Trigger: CTTAAGGAAGTTTTCAGGCAATTTGTGGAAGCTTGC...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTGAAAGCATCCTGAGTTaGCAAATGACAAAGCAAGTC +
Preference number: 5 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFESILS*QMTKQV
Trigger: GACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTC...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp AAGAATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACGTGGCTCAATTAGCTTaGGCTTTGCCAGGAGCACGG +
Preference number: 5 (lower is better)
Translates to: KNTQESNLDFKVLPHKCDVAQLA*ALPGAR
Trigger: CCGTGCTCCTGGCAAAGCCAAAGCTAATTGAGCCAC...GTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427887.2
CDS-3UTR CAA 90 bp GGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAAGGAGAGTTTGCTCTaGAAGGAGAAGCACCAGGAC +
Preference number: 5 (lower is better)
Translates to: GMAEGFQLLTITSRKRILKESLL*KEKHQD
Trigger: GTCCTGGTGCTTCTCCTTCAAGAGCAAACTCTCCTT...GAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CAA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGAGATGTAAGGAGAGTTaGCTCTTGAAGGAGAAGCAC +
Preference number: 5 (lower is better)
Translates to: ALESILSLQMTKQVPTHGRCKES*LLKEKH
Trigger: GTGCTTCTCCTTCAAGAGCAAACTCTCCTTACATCT...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CAA 90 bp ATGACTGGTGCAGAACATCTGCGTCCGAGTGGCCATAGCCATTGTCTACAGAAATTCACAACAGGCTGGTaGTTTTCAGATCTCAGTAGG +
Preference number: 5 (lower is better)
Translates to: MTGAEHLRPSGHSHCLQKFTTGW*FSDLSR
Trigger: CCTACTGAGATCTGAAAACAACCAGCCTGTTGTGAA...TTTCTGTAGACAATGGCTATGGCCACTCGGACGCAGATGTTCTGCACCAGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS TCA 90 bp TCTCCCGTAAACAGTCGTTCAGGATCTGAGTCTTCTTCTGGACGATaGCATTTTCATAGTCGAGTGGCTCAATTAGCTTTGGCTTTGCCG +
Preference number: 5 (lower is better)
Translates to: SPVNSRSGSESSSGR*HFHSRVAQLALALP
Trigger: CGGCAAAGCCAAAGCTAATTGAGCCACTCGACTATGAAAATGTCATCGTCCAGAAGAAGACTCAGATCCTGAACGACTGTTTACGGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000627024.2
ENST00000630992.2
ENST00000682017.1
CDS CCA 90 bp GCACAGTGCCTTTCTGTGACAGAATTTACTGTTTGCCCATCTTCATaGGACAAAGTCAGGGAGAATCCAAGTCAAGGTAGAAGACGTTGC +
Preference number: 5 (lower is better)
Translates to: AQCLSVTEFTVCPSS*DKVRENPSQGRRRC
Trigger: GCAACGTCTTCTACCTTGACTTGGATTCTCCCTGACTTTGTCCCATGAAGATGGGCAAACAGTAAATTCTGTCACAGAAAGGCACTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340449.7
CDS CCA 90 bp CTTCTCCCTCTTATCCAGGGAATTGCTCTTCTCACTATTCCTTTCTaGAAGGCTGTTACCCGAATCTGTGCTTATGAGAGATCCTCTCGA +
Preference number: 5 (lower is better)
Translates to: LLPLIQGIALLTIPF*KAVTRICAYERSSR
Trigger: TCGAGAGGATCTCTCATAAGCACAGATTCGGGTAACAGCCTTCCAGAAAGGAATAGTGAGAAGAGCAATTCCCTGGATAAGAGGGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638020.1
CDS-3UTR CAA 90 bp TTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGATCCAACTTGACCACTTaGTTCGGAAGCTGTCGAAAC +
Preference number: 5 (lower is better)
Translates to: FQGMAEGFQLLTITSRKRSNLTT*FGSCRN
Trigger: GTTTCGACAGCTTCCGAACAAAGTGGTCAAGTTGGA...TCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp AATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACACGATGGCACTGTTCATGTaGCCTTTGTACAGCCAGCCA +
Preference number: 5 (lower is better)
Translates to: NTQESNLDFKVLPHKCDTMALFM*PLYSQP
Trigger: TGGCTGGCTGTACAAAGGCAACATGAACAGTGCCAT...CGTGTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACGGATCCATCGCCAAGTaGAATCAGGTGGAAAAATCG +
Preference number: 5 (lower is better)
Translates to: VIGFGKHPEFANDKASPHGSIAK*NQVEKS
Trigger: CGATTTTTCCACCTGATTCAACTTGGCGATGGATCC...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GAGAGATCGCCATTTTTGACATGGATCCTGGCCATGCTGTCGAGCCACGTCTTCAGGAATCCAGAAATATaGATCCTTTTGGTTCTTTGG +
Preference number: 5 (lower is better)
Translates to: ERSPFLTWILAMLSSHVFRNPEI*ILLVLW
Trigger: CCAAAGAACCAAAAGGATCAATATTTCTGGATTCCT...GAAGACGTGGCTCGACAGCATGGCCAGGATCCATGTCAAAAATGGCGATCTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGATTGCAGCTTCAAAGTaGAGCTGGAGGATCTTATTT +
Preference number: 5 (lower is better)
Translates to: GKHPEFANDKASPHTRAMIAASK*SWRILF
Trigger: AAATAAGATCCTCCAGCTCAACTTTGAAGCTGCAAT...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp AACTGTATGATCCTGAGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGCCATTTCGCTTTTCTaGCATTGCAGCTTCAAAGTT +
Preference number: 5 (lower is better)
Translates to: NCMILRSHRHPGPLFQGMAISLF*HCSFKV
Trigger: AACTTTGAAGCTGCAATGCAAGAAAAGCGAAATGGC...CATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCTCAGGATCATACAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCCCAGAACCTTCCAATTaGCTTTGTTCATCATCTTCG +
Preference number: 5 (lower is better)
Translates to: FGKHPEFANDKASPHTRAPEPSN*LCSSSS
Trigger: CGAAGATGATGAACAAAGCAAATTGGAAGGTTCTGG...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp CTGGAATCTGGTTCCCCCAATGCCAACAACGTCTGCTATCAGCTGGCTGACAGAGATAAATCATTGCACTaGACAAGGATCCTTTTTCCA +
Preference number: 5 (lower is better)
Translates to: LESGSPNANNVCYQLADRDKSLH*TRILFP
Trigger: TGGAAAAAGGATCCTTGTCAAGTGCAATGATTTATC...TCTGTCAGCCAGCTGATAGCAGACGTTGTTGGCATTGGGGGAACCAGATTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp GCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATCACACGACCGCAGAAATCTTCCGGTaGTATTTTATGTCAAACAGG +
Preference number: 5 (lower is better)
Translates to: ANDKASPHTRAMRCNHTTAEIFR*YFMSNR
Trigger: CCTGTTTGACATAAAATACAACCGGAAGATTTCTGC...GGTCGTGTGATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp AAGAATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACCTTTGGCATGCCTGCTaGGCATTCTTCAGCACCTTC +
Preference number: 5 (lower is better)
Translates to: KNTQESNLDFKVLPHKCDLWHAC*AFFSTF
Trigger: GAAGGTGCTGAAGAATGCCAAGCAGGCATGCCAAAG...GTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp GCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGAAACTTTGGCATGCCTGCTaGGCATTCTTCAGCACCTTC +
Preference number: 5 (lower is better)
Translates to: AEGFQLLTITSRKRILRKLWHAC*AFFSTF
Trigger: GAAGGTGCTGAAGAATGCCAAGCAGGCATGCCAAAG...TTTCCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp GTTCCCTTAGGACTGCTGAACAATAAACACCCAGCAGCCACCCCAAATGGTCAGTTGAGCATGTCATCATaGGATAGCTTATTGCTGTCT +
Preference number: 5 (lower is better)
Translates to: VPLGLLNNKHPAATPNGQLSMSS*DSLLLS
Trigger: AGACAGCAATAAGCTATCCAATGATGACATGCTCAA...CTGACCATTTGGGGTGGCTGCTGGGTGTTTATTGTTCAGCAGTCCTAAGGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448493.7
CDS-3UTR CAA 90 bp GCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATCACACGACCTTGAGCATGTCATCATaGGATAGCTTATTGCTGTCT +
Preference number: 5 (lower is better)
Translates to: ANDKASPHTRAMRCNHTTLSMSS*DSLLLS
Trigger: AGACAGCAATAAGCTATCCAATGATGACATGCTCAA...GGTCGTGTGATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp CTTCAAGTAATGACTGGTGCAGAACATCTGCGTCCGAGTGGCCATAGCTGTGGTAAGTCTGCAAGTAACTaGAGCATGTCATCATTGGAT +
Preference number: 5 (lower is better)
Translates to: LQVMTGAEHLRPSGHSCGKSASN*SMSSLD
Trigger: ATCCAATGATGACATGCTCAAGTTACTTGCAGACTT...ACCACAGCTATGGCCACTCGGACGCAGATGTTCTGCACCAGTCATTACTTGAAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR CAA 90 bp GCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGAAACCAGGAGTAGCCAACTaGGGTTTCAACGACATCCCT +
Preference number: 5 (lower is better)
Translates to: AEGFQLLTITSRKRILRKPGVAN*GFNDIP
Trigger: AGGGATGTCGTTGAAACCCAAGTTGGCTACTCCTGG...TTTCCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp GACAGATATGATGACTTGCAAATGTGTCCGGACAAAGGACTTCTTTCCAGTGTACCAGGAGTAGCCAACTaGGGTTTCAACGACATCCCT +
Preference number: 5 (lower is better)
Translates to: DRYDDLQMCPDKGLLSSVPGVAN*GFNDIP
Trigger: AGGGATGTCGTTGAAACCCAAGTTGGCTACTCCTGG...TACACTGGAAAGAAGTCCTTTGTCCGGACACATTTGCAAGTCATCATATCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp GGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCATTTTCAGCAGTGGCTaGCCTCCATCTACCCATTTA +
Preference number: 5 (lower is better)
Translates to: GPLFQGMAEGFQLLTITSIFSSG*PPSTHL
Trigger: TAAATGGGTAGATGGAGGCAAGCCACTGCTGAAAAT...GCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp GGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAAATCGGCAGAAGGCTaGAGAATCGTGGTCATGGAT +
Preference number: 5 (lower is better)
Translates to: GMAEGFQLLTITSRKRILKSAEG*RIVVMD
Trigger: ATCCATGACCACGATTCTCAAGCCTTCTGCCGATTT...GAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCGCAGCAACTTAACTTaGGAGTTCTCTATCAAATGC +
Preference number: 5 (lower is better)
Translates to: ALESILSLQMTKQVPTHGRSNLT*EFSIKC
Trigger: GCATTTGATAGAGAACTCCAAAGTTAAGTTGCTGCG...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCAAGGTGAAACATCTCTaGATGAAGACAGCAAGGCTA +
Preference number: 5 (lower is better)
Translates to: FGKHPEFANDKASPHTRAKVKHL*MKTARL
Trigger: TAGCCTTGCTGTCTTCATCAAGAGATGTTTCACCTT...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp AACTGTATGATCCTGAGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGAAGGTGAAACATCTCTaGATGAAGACAGCAAGGCTA +
Preference number: 5 (lower is better)
Translates to: NCMILRSHRHPGPLFQGMKVKHL*MKTARL
Trigger: TAGCCTTGCTGTCTTCATCAAGAGATGTTTCACCTT...CATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCTCAGGATCATACAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp TGGTTCTTAAACGCCAATGTAAATAGAGAAAGCGTGTCCAGAGCTGTCAGGCAAGTCAAGCTGGAGGTCTaGGTATCTTTGAATCCTGCC +
Preference number: 5 (lower is better)
Translates to: WFLNANVNRESVSRAVRQVKLEV*VSLNPA
Trigger: GGCAGGATTCAAAGATACCAAGACCTCCAGCTTGAC...TTGCCTGACAGCTCTGGACACGCTTTCTCTATTTACATTGGCGTTTAAGAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp AATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACACGGTCAAGCTGGAGGTCTaGGTATCTTTGAATCCTGCC +
Preference number: 5 (lower is better)
Translates to: NTQESNLDFKVLPHKCDTVKLEV*VSLNPA
Trigger: GGCAGGATTCAAAGATACCAAGACCTCCAGCTTGAC...CGTGTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAATCCTTGTGCAGGCTGTaGTCCAGGGTGCTTCCCTTC +
Preference number: 5 (lower is better)
Translates to: SSSRVSTTPLLRHNENFESLCRL*SRVLPF
Trigger: GAAGGGAAGCACCCTGGACAACAGCCTGCACAAGGA...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp CCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAATCCTTGTGCAGGCTGTaGTCCAGGGTGCTTCCCTTC +
Preference number: 5 (lower is better)
Translates to: PGSLVQKLQWSVPLGHQKSLCRL*SRVLPF
Trigger: GAAGGGAAGCACCCTGGACAACAGCCTGCACAAGGA...TTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGGCATTTCTCACACTGTaGATGTTTGGAGTTGAGGTT +
Preference number: 5 (lower is better)
Translates to: ALESILSLQMTKQVPTHGAFLTL*MFGVEV
Trigger: AACCTCAACTCCAAACATCAACAGTGTGAGAAATGC...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCAATGTGCTACTTTGTaGGTGCTTATCCAGGGAATT +
Preference number: 5 (lower is better)
Translates to: ALESILSLQMTKQVPTHGQCATL*VLIQGI
Trigger: AATTCCCTGGATAAGCACCAACAAAGTAGCACATTG...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp CATGAGAGGATTATGTCCATGGTCGGCCAGGAGCTGGTTCTTAAACGCCAATGTGAAGAGCCACACACTTaGTTAAACTGGCTATGTATC +
Preference number: 5 (lower is better)
Translates to: HERIMSMVGQELVLKRQCEEPHT*LNWLCI
Trigger: GATACATAGCCAGTTTAACAAAGTGTGTGGCTCTTC...ACATTGGCGTTTAAGAACCAGCTCCTGGCCGACCATGGACATAATCCTCTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS-3UTR CAA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCGACAGATATGATGACTaGCAAATGTGTCCGGACAAA +
Preference number: 5 (lower is better)
Translates to: FGKHPEFANDKASPHTRADRYDD*QMCPDK
Trigger: TTTGTCCGGACACATTTGCAAGTCATCATATCTGTC...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TGGTTCTTAAACGCCAATGTAAATAGAGAAAGCGTGTCCAGAGCTGTCAGGCAAGAGAGATCGCCATTTTaGACATGGATCCTGGCCATG +
Preference number: 5 (lower is better)
Translates to: WFLNANVNRESVSRAVRQERSPF*TWILAM
Trigger: CATGGCCAGGATCCATGTCAAAAATGGCGATCTCTC...TTGCCTGACAGCTCTGGACACGCTTTCTCTATTTACATTGGCGTTTAAGAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp ATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACAGAGAGATCGCCATTTTaGACATGGATCCTGGCCATG +
Preference number: 5 (lower is better)
Translates to: IGFGKHPEFANDKASPHTERSPF*TWILAM
Trigger: CATGGCCAGGATCCATGTCAAAAATGGCGATCTCTC...TGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTAGAAGGCGGTGCATCCTaGTCTAAACACGCCTCCCCG +
Preference number: 5 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLEGGAS*SKHASP
Trigger: CGGGGAGGCGTGTTTAGACAAGGATGCACCGCCTTC...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000652315.1
CDS-3UTR CAA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTATCACCAGTTCCTTTTaGACACTTCTACTACTTGTC +
Preference number: 5 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFITSSF*TLLLLV
Trigger: GACAAGTAGTAGAAGTGTCAAAAAGGAACTGGTGAT...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
CDS-3UTR CAA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGAGCAGCTTCACTTTATaGTCAGGATATCGCTTTGTG +
Preference number: 5 (lower is better)
Translates to: ALESILSLQMTKQVPTHGSSFTL*SGYRFV
Trigger: CACAAAGCGATATCCTGACAATAAAGTGAAGCTGCT...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp CTGGTACATGACAGGGATGCGCTTCTTCACATAAGGGAAGCAGTGTATGGCTGTAGCAGCTTCACTTTATaGTCAGGATATCGCTTTGTG +
Preference number: 5 (lower is better)
Translates to: LVHDRDALLHIREAVYGCSSFTL*SGYRFV
Trigger: CACAAAGCGATATCCTGACAATAAAGTGAAGCTGCT...ACAGCCATACACTGCTTCCCTTATGTGAAGAAGCGCATCCCTGTCATGTACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CAA 90 bp GGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGAGCAGCTTCACTTTATaGTCAGGATATCGCTTTGTG +
Preference number: 5 (lower is better)
Translates to: GFGKHPEFANDKASPHTRSSFTL*SGYRFV
Trigger: CACAAAGCGATATCCTGACAATAAAGTGAAGCTGCT...CCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCGAAAGCATCCTGAGTTaGCAAATGACAAAGCAAGTC +
Preference number: 5 (lower is better)
Translates to: FGKHPEFANDKASPHTRAESILS*QMTKQV
Trigger: GACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTC...GGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGGAAAGCATCCTGAGTTaGCAAATGACAAAGCAAGTC +
Preference number: 5 (lower is better)
Translates to: ALESILSLQMTKQVPTHGESILS*QMTKQV
Trigger: GACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTC...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp CAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACACGTTCACCAACTATaGGCTCCAAGACACTTTCAG +
Preference number: 5 (lower is better)
Translates to: QGMAEGFQLLTITSRKRIHVHQL*APRHFQ
Trigger: CTGAAAGTGTCTTGGAGCCAATAGTTGGTGAACGTG...TATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp AACTGTATGATCCTGAGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGTATTGCAGGATAAATTaGGGCATTGGTGTGGGGTTT +
Preference number: 5 (lower is better)
Translates to: NCMILRSHRHPGPLFQGMYCRIN*GIGVGF
Trigger: AAACCCCACACCAATGCCCAAATTTATCCTGCAATA...CATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCTCAGGATCATACAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CAA 90 bp ATGACTGGTGCAGAACATCTGCGTCCGAGTGGCCATAGCCATTGTCTACAGAAAAAGTTGGCTCAAGAGTaGCATTCCATTACTTCACCT +
Preference number: 5 (lower is better)
Translates to: MTGAEHLRPSGHSHCLQKKLAQE*HSITSP
Trigger: AGGTGAAGTAATGGAATGCAACTCTTGAGCCAACTT...TTTCTGTAGACAATGGCTATGGCCACTCGGACGCAGATGTTCTGCACCAGTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CAA 90 bp GGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGTTTTCTGTTAGGAAGTaGGCTCAAGAGTTGCATTCC +
Preference number: 5 (lower is better)
Translates to: GFGKHPEFANDKASPHTRFSVRK*AQELHS
Trigger: GGAATGCAACTCTTGAGCCAACTTCCTAACAGAAAA...CCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS TCA 90 bp TCTCCCGTAAACAGTCGTTCAGGATCTGAGTCTTCTTCTGGACGATaGCATTTTCATAGTCGAGTGGCTCAATTAGCTTTGGCTTTGCCA +
Preference number: 5 (lower is better)
Translates to: SPVNSRSGSESSSGR*HFHSRVAQLALALP
Trigger: TGGCAAAGCCAAAGCTAATTGAGCCACTCGACTATGAAAATGTCATCGTCCAGAAGAAGACTCAGATCCTGAACGACTGTTTACGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339416.7
ENST00000427887.2
ENST00000448493.7
ENST00000652315.1
CDS GCA 90 bp TTATTGTGTGTAGGAGAACAGGGACATGCATGGACTATCATCGACTaGATGCTGCTGGGTGACTTCAAAGTGACAATAAGAAGGCACAGT +
Preference number: 5 (lower is better)
Translates to: LLCVGEQGHAWTIID*MLLGDFKVTIRRHS
Trigger: ACTGTGCCTTCTTATTGTCACTTTGAAGTCACCCAGCAGCATGCAGTCGATGATAGTCCATGCATGTCCCTGTTCTCCTACACACAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340449.7
CDS-3UTR CAA 90 bp CCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAAGTGGCTCAATTAGCTTaGGCTTTGCCAGCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: PGSLVQKLQWSVPLGHQKVAQLA*ALPARR
Trigger: CCTCCTGGCTGGCAAAGCCAAAGCTAATTGAGCCAC...TTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448493.7
CDS-3UTR CAA 90 bp AAGAATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACCTGTTCATGTTGCCTTaGTACAGCCAGCCATGCTTG +
Preference number: 5 (lower is better)
Translates to: KNTQESNLDFKVLPHKCDLFMLP*YSQPCL
Trigger: CAAGCATGGCTGGCTGTACAAAGGCAACATGAACAG...GTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp TTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAGGATCCATCGCCAAGTaGAATCAGGTGGAAAAATCG +
Preference number: 5 (lower is better)
Translates to: LFQGMAEGFQLLTITSRKGSIAK*NQVEKS
Trigger: CGATTTTTCCACCTGATTCAACTTGGCGATGGATCC...TTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTAGGAATCCAGAAATATaGATCCTTTTGGTTCTTTGG +
Preference number: 5 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFRNPEI*ILLVLW
Trigger: CCAAAGAACCAAAAGGATCAATATTTCTGGATTCCT...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp ACAGAGCCGCACACATGTCCGCTCTCCCTTCATAGAATGTTGAGGGAAACTTATCCAGAACCTTCCAATTaGCTTTGTTCATCATCTTCG +
Preference number: 5 (lower is better)
Translates to: TEPHTCPLSLHRMLRETYPEPSN*LCSSSS
Trigger: CGAAGATGATGAACAAAGCAAATTGGAAGGTTCTGG...ATAAGTTTCCCTCAACATTCTATGAAGGGAGAGCGGACATGTGTGCGGCTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp GGACCTTTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCCCAGAACCTTCCAATTaGCTTTGTTCATCATCTTCG +
Preference number: 5 (lower is better)
Translates to: GPLFQGMAEGFQLLTITSPEPSN*LCSSSS
Trigger: CGAAGATGATGAACAAAGCAAATTGGAAGGTTCTGG...GCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAAAGGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp GTTCCCTTAGGACTGCTGAACAATAAACACCCAGCAGCCACCCCAAATGGTCAGCTTTCACTTTTCAGTTaGATTTCTGCTTCTCTTGCA +
Preference number: 5 (lower is better)
Translates to: VPLGLLNNKHPAATPNGQLSLFS*ISASLA
Trigger: TGCAAGAGAAGCAGAAATCAAACTGAAAAGTGAAAG...CTGACCATTTGGGGTGGCTGCTGGGTGTTTATTGTTCAGCAGTCCTAAGGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448493.7
CDS-3UTR CAA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTGATAAATCATTGCACTaGACAAGGATCCTTTTTCCA +
Preference number: 5 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFDKSLH*TRILFP
Trigger: TGGAAAAAGGATCCTTGTCAAGTGCAATGATTTATC...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGGCAGAAATCTTCCGGTaGTATTTTATGTCAAACAGG +
Preference number: 5 (lower is better)
Translates to: ALESILSLQMTKQVPTHGAEIFR*YFMSNR
Trigger: CCTGTTTGACATAAAATACAACCGGAAGATTTCTGC...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp CAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATAAAGGCTGAGTGTGTTTaGGTATGCAGGGCACAAATT +
Preference number: 5 (lower is better)
Translates to: QGMAEGFQLLTITSRKRIKAECV*VCRAQI
Trigger: AATTTGTGCCCTGCATACCAAAACACACTCAGCCTT...TATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp GGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAAGGCTGAGTGTGTTTaGGTATGCAGGGCACAAATT +
Preference number: 5 (lower is better)
Translates to: GMAEGFQLLTITSRKRILKAECV*VCRAQI
Trigger: AATTTGTGCCCTGCATACCAAAACACACTCAGCCTT...GAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACCTTCCTTTACTTGAGTaGTCACAGCTGACATGGAAG +
Preference number: 5 (lower is better)
Translates to: VIGFGKHPEFANDKASPHLPLLE*SQLTWK
Trigger: CTTCCATGTCAGCTGTGACAACTCAAGTAAAGGAAG...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCCTTCCTTTACTTGAGTaGTCACAGCTGACATGGAAG +
Preference number: 5 (lower is better)
Translates to: GMAEGFQLLTITSRKRILLPLLE*SQLTWK
Trigger: CTTCCATGTCAGCTGTGACAACTCAAGTAAAGGAAG...GAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp GGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCATTTTCAGCAGTGGCTaGCCTCCATCTACCCATTTA +
Preference number: 5 (lower is better)
Translates to: GMAEGFQLLTITSRKRILIFSSG*PPSTHL
Trigger: TAAATGGGTAGATGGAGGCAAGCCACTGCTGAAAAT...GAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp AATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACACGAAATCGGCAGAAGGCTaGAGAATCGTGGTCATGGAT +
Preference number: 5 (lower is better)
Translates to: NTQESNLDFKVLPHKCDTKSAEG*RIVVMD
Trigger: ATCCATGACCACGATTCTCAAGCCTTCTGCCGATTT...CGTGTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp CAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATATACTTCAGTAGTTTGTaGCTGGTGAGGAAATCGGCA +
Preference number: 5 (lower is better)
Translates to: QGMAEGFQLLTITSRKRIYFSSL*LVRKSA
Trigger: TGCCGATTTCCTCACCAGCAACAAACTACTGAAGTA...TATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp GGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCTACTTCAGTAGTTTGTaGCTGGTGAGGAAATCGGCA +
Preference number: 5 (lower is better)
Translates to: GMAEGFQLLTITSRKRILYFSSL*LVRKSA
Trigger: TGCCGATTTCCTCACCAGCAACAAACTACTGAAGTA...GAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp AATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACACGATTCAAAGAGGGTCTTaGGGTCTCCAGGAGCAAAAC +
Preference number: 5 (lower is better)
Translates to: NTQESNLDFKVLPHKCDTIQRGS*GLQEQN
Trigger: GTTTTGCTCCTGGAGACCCAAAGACCCTCTTTGAAT...CGTGTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp ATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGATTCAAAGAGGGTCTTaGGGTCTCCAGGAGCAAAAC +
Preference number: 5 (lower is better)
Translates to: MAEGFQLLTITSRKRILRIQRGS*GLQEQN
Trigger: GTTTTGCTCCTGGAGACCCAAAGACCCTCTTTGAAT...CCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp TTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGATTGCCTGATGGCTCCTaGAAGCATATCTGTCATCAA +
Preference number: 5 (lower is better)
Translates to: FQGMAEGFQLLTITSRKRLPDGS*KHICHQ
Trigger: TTGATGACAGATATGCTTCAAGGAGCCATCAGGCAA...TCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACTTGCCTGATGGCTCCTaGAAGCATATCTGTCATCAA +
Preference number: 5 (lower is better)
Translates to: VIGFGKHPEFANDKASPHLPDGS*KHICHQ
Trigger: TTGATGACAGATATGCTTCAAGGAGCCATCAGGCAA...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp ATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACAATAAGCCGGTCACTGTaGGCACAGTTGTTGATGATG +
Preference number: 5 (lower is better)
Translates to: IGFGKHPEFANDKASPHTISRSL*AQLLMM
Trigger: CATCATCAACAACTGTGCCAACAGTGACCGGCTTAT...TGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAACGTGGACATAGCACATaGCTGCCTCTGAGAGATCGC +
Preference number: 5 (lower is better)
Translates to: SSSRVSTTPLLRHNENFERGHST*LPLRDR
Trigger: GCGATCTCTCAGAGGCAGCAATGTGCTATGTCCACG...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp ATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACAATCAGCACATCCTCGTaGAAATGGACATCCTGCATC +
Preference number: 5 (lower is better)
Translates to: IGFGKHPEFANDKASPHTISTSS*KWTSCI
Trigger: GATGCAGGATGTCCATTTCAACGAGGATGTGCTGAT...TGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACTCCTTAGGGTTGACCTaGCCAGAATCCTGTATCATT +
Preference number: 5 (lower is better)
Translates to: VIGFGKHPEFANDKASPHSLGLT*PESCII
Trigger: AATGATACAGGATTCTGGCAAGGTCAACCCTAAGGA...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTGATATCGCTTTGTGTTaGTATCATCTAAGAAAGCTC +
Preference number: 5 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFDIALC*YHLRKL
Trigger: GAGCTTTCTTAGATGATACAAACACAAAGCGATATC...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATCACACGACCGATATCGCTTTGTGTTaGTATCATCTAAGAAAGCTC +
Preference number: 5 (lower is better)
Translates to: ANDKASPHTRAMRCNHTTDIALC*YHLRKL
Trigger: GAGCTTTCTTAGATGATACAAACACAAAGCGATATC...GGTCGTGTGATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATCACACGACCTGTCAGGATATCGCTTaGTGTTTGTATCATCTAAGA +
Preference number: 5 (lower is better)
Translates to: ANDKASPHTRAMRCNHTTCQDIA*CLYHLR
Trigger: TCTTAGATGATACAAACACAAAGCGATATCCTGACA...GGTCGTGTGATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGTTGGTTCTAAACTGCTaGACTAGTTTTAAGCTCACA +
Preference number: 5 (lower is better)
Translates to: GKHPEFANDKASPHTRAMLVLNC*TSFKLT
Trigger: TGTGAGCTTAAAACTAGTCAAGCAGTTTAGAACCAA...CATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp ATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGCACGTTCACCAACTATaGGCTCCAAGACACTTTCAG +
Preference number: 5 (lower is better)
Translates to: MAEGFQLLTITSRKRILRHVHQL*APRHFQ
Trigger: CTGAAAGTGTCTTGGAGCCAATAGTTGGTGAACGTG...CCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp TGTTGGCTTCAAGTAATGACTGGTGCAGAACATCTGCGTCCGAGTGGCCATAGCAAGGTGAATTCTGAATaGGAGAAGAGTCAAAAGAGT +
Preference number: 5 (lower is better)
Translates to: CWLQVMTGAEHLRPSGHSKVNSE*EKSQKS
Trigger: ACTCTTTTGACTCTTCTCCAATTCAGAATTCACCTT...GCTATGGCCACTCGGACGCAGATGTTCTGCACCAGTCATTACTTGAAGCCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CAA 90 bp CAGGCATCAATGTCAGTGCAGCCCTCCCTGCCATGTAGATCCCAGAACCTTTTTAATGTAGAACAGCATTaGAAGAACACAGAAGTCATG +
Preference number: 5 (lower is better)
Translates to: QASMSVQPSLPCRSQNLFNVEQH*KNTEVM
Trigger: CATGACTTCTGTGTTCTTCAAATGCTGTTCTACATT...AAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS TCA 90 bp AAAACTGGCCCACCAGGTCTTAAGGGGCTGAGAGTCTTCCTCATCTaGATCTTTGAATTCAATGCAAATCGCAATATTTCTAGCCTTGGC +
Preference number: 5 (lower is better)
Translates to: KTGPPGLKGLRVFLI*IFEFNANRNISSLG
Trigger: GCCAAGGCTAGAAATATTGCGATTTGCATTGAATTCAAAGATTCAGATGAGGAAGACTCTCAGCCCCTTAAGACCTGGTGGGCCAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS GCA 90 bp GAACCATGGCAATTTTTGTATAGAGCAGAGCATATCTTTCCACAGTaGATGGAGCAAAGTCACATCATCTCCACTCCTGTTTTCCTTGGC +
Preference number: 5 (lower is better)
Translates to: EPWQFLYRAEHIFPQ*MEQSHIISTPVFLG
Trigger: GCCAAGGAAAACAGGAGTGGAGATGATGTGACTTTGCTCCATGCACTGTGGAAAGATATGCTCTGCTCTATACAAAAATTGCCATGGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340449.7
CDS CCA 90 bp CATGGCAATTTTTGTATAGAGCAGAGCATATCTTTCCACAGTGCATaGAGCAAAGTCACATCATCTCCACTCCTGTTTTCCTTGGCCCAT +
Preference number: 5 (lower is better)
Translates to: HGNFCIEQSISFHSA*SKVTSSPLLFSLAH
Trigger: ATGGGCCAAGGAAAACAGGAGTGGAGATGATGTGACTTTGCTCCATGCACTGTGGAAAGATATGCTCTGCTCTATACAAAAATTGCCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340449.7
CDS-3UTR CAA 90 bp ATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACAGGAAGTTTATCCAACTaGACCACTTTGTTCGGAAGC +
Preference number: 5 (lower is better)
Translates to: IGFGKHPEFANDKASPHTGSLSN*TTLFGS
Trigger: GCTTCCGAACAAAGTGGTCAAGTTGGATAAACTTCC...TGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp ATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGGGAAGTTTATCCAACTaGACCACTTTGTTCGGAAGC +
Preference number: 5 (lower is better)
Translates to: MAEGFQLLTITSRKRILRGSLSN*TTLFGS
Trigger: GCTTCCGAACAAAGTGGTCAAGTTGGATAAACTTCC...CCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp AAGAATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACGGATCCATCGCCAAGTaGAATCAGGTGGAAAAATCG +
Preference number: 5 (lower is better)
Translates to: KNTQESNLDFKVLPHKCDGSIAK*NQVEKS
Trigger: CGATTTTTCCACCTGATTCAACTTGGCGATGGATCC...GTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp CAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACCAGAACCTTCCAATTaGCTTTGTTCATCATCTTCG +
Preference number: 5 (lower is better)
Translates to: QGMAEGFQLLTITSRKRIPEPSN*LCSSSS
Trigger: CGAAGATGATGAACAAAGCAAATTGGAAGGTTCTGG...TATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGGATAAATCATTGCACTaGACAAGGATCCTTTTTCCA +
Preference number: 5 (lower is better)
Translates to: ALESILSLQMTKQVPTHGDKSLH*TRILFP
Trigger: TGGAAAAAGGATCCTTGTCAAGTGCAATGATTTATC...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp AACTGTATGATCCTGAGGAGTCACAGGCATCCGGGACCTTTATTTCAGGGCATGGATAAATCATTGCACTaGACAAGGATCCTTTTTCCA +
Preference number: 5 (lower is better)
Translates to: NCMILRSHRHPGPLFQGMDKSLH*TRILFP
Trigger: TGGAAAAAGGATCCTTGTCAAGTGCAATGATTTATC...CATGCCCTGAAATAAAGGTCCCGGATGCCTGTGACTCCTCAGGATCATACAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp CCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATGCAGAAATCTTCCGGTaGTATTTTATGTCAAACAGG +
Preference number: 5 (lower is better)
Translates to: PEFANDKASPHTRAMRCNAEIFR*YFMSNR
Trigger: CCTGTTTGACATAAAATACAACCGGAAGATTTCTGC...ATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp ACTAAATCTCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCTTTGGCATGCCTGCTaGGCATTCTTCAGCACCTTC +
Preference number: 5 (lower is better)
Translates to: TKSPGSLVQKLQWSVPLGLWHAC*AFFSTF
Trigger: GAAGGTGCTGAAGAATGCCAAGCAGGCATGCCAAAG...ACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGAGATTTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp CCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGCCATGAGATGTAATTTGAGCATGTCATCATaGGATAGCTTATTGCTGTCT +
Preference number: 5 (lower is better)
Translates to: PEFANDKASPHTRAMRCNLSMSS*DSLLLS
Trigger: AGACAGCAATAAGCTATCCAATGATGACATGCTCAA...ATTACATCTCATGGCCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp ATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACAAAGGCTGAGTGTGTTTaGGTATGCAGGGCACAAATT +
Preference number: 5 (lower is better)
Translates to: IGFGKHPEFANDKASPHTKAECV*VCRAQI
Trigger: AATTTGTGCCCTGCATACCAAAACACACTCAGCCTT...TGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp AATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACACGCTTCCTTTACTTGAGTaGTCACAGCTGACATGGAAG +
Preference number: 5 (lower is better)
Translates to: NTQESNLDFKVLPHKCDTLPLLE*SQLTWK
Trigger: CTTCCATGTCAGCTGTGACAACTCAAGTAAAGGAAG...CGTGTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp TTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAATCGTGGTCATGGATTaGGTCAGTTCTTCATGCACT +
Preference number: 5 (lower is better)
Translates to: LFQGMAEGFQLLTITSRKIVVMD*VSSSCT
Trigger: AGTGCATGAAGAACTGACCAAATCCATGACCACGAT...TTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp CGTATCCTTTTGGTTAAGTCCTTCACATCAGAGGAGAAGCTGGTGTGCTTAATAAAATCGGCAGAAGGCTaGAGAATCGTGGTCATGGAT +
Preference number: 5 (lower is better)
Translates to: RILLVKSFTSEEKLVCLIKSAEG*RIVVMD
Trigger: ATCCATGACCACGATTCTCAAGCCTTCTGCCGATTT...TATTAAGCACACCAGCTTCTCCTCTGATGTGAAGGACTTAACCAAAAGGATACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp CGTATCCTTTTGGTTAAGTCCTTCACATCAGAGGAGAAGCTGGTGTGCTTAATAATTCAAAGAGGGTCTTaGGGTCTCCAGGAGCAAAAC +
Preference number: 5 (lower is better)
Translates to: RILLVKSFTSEEKLVCLIIQRGS*GLQEQN
Trigger: GTTTTGCTCCTGGAGACCCAAAGACCCTCTTTGAAT...TATTAAGCACACCAGCTTCTCCTCTGATGTGAAGGACTTAACCAAAAGGATACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCTCCTTGTGCAGGCTGTaGTCCAGGGTGCTTCCCTTC +
Preference number: 5 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFSLCRL*SRVLPF
Trigger: GAAGGGAAGCACCCTGGACAACAGCCTGCACAAGGA...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GTCTTTTTAATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTTCCTTGTGCAGGCTGTaGTCCAGGGTGCTTCCCTTC +
Preference number: 5 (lower is better)
Translates to: VFLIQMWYRMFNYSRAVISLCRL*SRVLPF
Trigger: GAAGGGAAGCACCCTGGACAACAGCCTGCACAAGGA...AATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTATTAAAAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GACAGATATGATGACTTGCAAATGTGTCCGGACAAAGGACTTCTTTCCAGTGTATCCCAATGTGCTACTTaGTTGGTGCTTATCCAGGGA +
Preference number: 5 (lower is better)
Translates to: DRYDDLQMCPDKGLLSSVSQCAT*LVLIQG
Trigger: TCCCTGGATAAGCACCAACAAAGTAGCACATTGGGA...TACACTGGAAAGAAGTCCTTTGTCCGGACACATTTGCAAGTCATCATATCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACGACAGATATGATGACTaGCAAATGTGTCCGGACAAA +
Preference number: 5 (lower is better)
Translates to: VIGFGKHPEFANDKASPHDRYDD*QMCPDK
Trigger: TTTGTCCGGACACATTTGCAAGTCATCATATCTGTC...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGGATATCGCTTTGTGTTaGTATCATCTAAGAAAGCTC +
Preference number: 5 (lower is better)
Translates to: ALESILSLQMTKQVPTHGDIALC*YHLRKL
Trigger: GAGCTTTCTTAGATGATACAAACACAAAGCGATATC...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGTGTCAGGATATCGCTTaGTGTTTGTATCATCTAAGA +
Preference number: 5 (lower is better)
Translates to: GFGKHPEFANDKASPHTRCQDIA*CLYHLR
Trigger: TCTTAGATGATACAAACACAAAGCGATATCCTGACA...CCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAATCATCCCGTGAACCATaGTGCTTGTTGGAGTCCCAC +
Preference number: 5 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNESSREP*CLLESH
Trigger: GTGGGACTCCAACAAGCACAATGGTTCACGGGATGA...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACGGGTTGGTTCTAAACTGCTaGACTAGTTTTAAGCTCACA +
Preference number: 5 (lower is better)
Translates to: ALESILSLQMTKQVPTHGLVLNC*TSFKLT
Trigger: TGTGAGCTTAAAACTAGTCAAGCAGTTTAGAACCAA...CCCGTGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCCAATTAGCTTTGGCTTaGCCAGGAGCACGGAGCCGC +
Preference number: 5 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFQLALA*PGARSR
Trigger: GCGGCTCCGTGCTCCTGGCAAAGCCAAAGCTAATTG...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000652315.1
CDS-3UTR CAA 90 bp CAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACAACCACCATACACTTaGTATCAGCTCTTAATCCCT +
Preference number: 5 (lower is better)
Translates to: QGMAEGFQLLTITSRKRIQPPYT*YQLLIP
Trigger: AGGGATTAAGAGCTGATACAAAGTGTATGGTGGTTG...TATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS CCA 90 bp AAAGTGACAATAAGAAGGCACAGTGTTCATCAAACTCGACCACCGTaGATGGCAAACATGTACAAGGTTCACAGTCTAGTTCAGGATCTT +
Preference number: 5 (lower is better)
Translates to: KVTIRRHSVHQTRPP*MANMYKVHSLVQDL
Trigger: AAGATCCTGAACTAGACTGTGAACCTTGTACATGTTTGCCATCCACGGTGGTCGAGTTTGATGAACACTGTGCCTTCTTATTGTCACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340449.7
CDS-3UTR CAA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTATCCACATCCTCTTCCTaGGCTCTTCCGAAACAGGCT +
Preference number: 5 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLSTSSS*ALPKQA
Trigger: AGCCTGTTTCGGAAGAGCCAAGGAAGAGGATGTGGA...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448493.7
CDS-3UTR CAA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAAGCAGCATCCTCATCTTaGTCGACCTCCTCGTCAACT +
Preference number: 5 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKAASSS*STSSST
Trigger: AGTTGACGAGGAGGTCGACAAAGATGAGGATGCTGC...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAACTGTTCATGTTGCCTTaGTACAGCCAGCCATGCTTG +
Preference number: 5 (lower is better)
Translates to: SSSRVSTTPLLRHNENFELFMLP*YSQPCL
Trigger: CAAGCATGGCTGGCTGTACAAAGGCAACATGAACAG...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAAATGGCACTGTTCATGTaGCCTTTGTACAGCCAGCCA +
Preference number: 5 (lower is better)
Translates to: SSSRVSTTPLLRHNENFEMALFM*PLYSQP
Trigger: TGGCTGGCTGTACAAAGGCAACATGAACAGTGCCAT...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACGCAGAAATCTTCCGGTaGTATTTTATGTCAAACAGG +
Preference number: 5 (lower is better)
Translates to: VIGFGKHPEFANDKASPHAEIFR*YFMSNR
Trigger: CCTGTTTGACATAAAATACAACCGGAAGATTTCTGC...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTACTTTGGCATGCCTGCTaGGCATTCTTCAGCACCTTC +
Preference number: 5 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLLWHAC*AFFSTF
Trigger: GAAGGTGCTGAAGAATGCCAAGCAGGCATGCCAAAG...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp CAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATATTGAGCATGTCATCATaGGATAGCTTATTGCTGTCT +
Preference number: 5 (lower is better)
Translates to: QGMAEGFQLLTITSRKRILSMSS*DSLLLS
Trigger: AGACAGCAATAAGCTATCCAATGATGACATGCTCAA...TATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp TTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGATTGAGCATGTCATCATaGGATAGCTTATTGCTGTCT +
Preference number: 5 (lower is better)
Translates to: FQGMAEGFQLLTITSRKRLSMSS*DSLLLS
Trigger: AGACAGCAATAAGCTATCCAATGATGACATGCTCAA...TCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp CAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATAAAGTCTGCAAGTAACTaGAGCATGTCATCATTGGAT +
Preference number: 5 (lower is better)
Translates to: QGMAEGFQLLTITSRKRIKSASN*SMSSLD
Trigger: ATCCAATGATGACATGCTCAAGTTACTTGCAGACTT...TATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACATTGTAATGTCTAGATaGCCTAAAATCACTGGGAGC +
Preference number: 5 (lower is better)
Translates to: VIGFGKHPEFANDKASPHIVMSR*PKITGS
Trigger: GCTCCCAGTGATTTTAGGCAATCTAGACATTACAAT...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp CGTATCCTTTTGGTTAAGTCCTTCACATCAGAGGAGAAGCTGGTGTGCTTAATATACTTCAGTAGTTTGTaGCTGGTGAGGAAATCGGCA +
Preference number: 5 (lower is better)
Translates to: RILLVKSFTSEEKLVCLIYFSSL*LVRKSA
Trigger: TGCCGATTTCCTCACCAGCAACAAACTACTGAAGTA...TATTAAGCACACCAGCTTCTCCTCTGATGTGAAGGACTTAACCAAAAGGATACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp ATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGCGCAGCAACTTAACTTaGGAGTTCTCTATCAAATGC +
Preference number: 5 (lower is better)
Translates to: MAEGFQLLTITSRKRILRRSNLT*EFSIKC
Trigger: GCATTTGATAGAGAACTCCAAAGTTAAGTTGCTGCG...CCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp TTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAACGCAGCAACTTAACTTaGGAGTTCTCTATCAAATGC +
Preference number: 5 (lower is better)
Translates to: LFQGMAEGFQLLTITSRKRSNLT*EFSIKC
Trigger: GCATTTGATAGAGAACTCCAAAGTTAAGTTGCTGCG...TTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp TGGTTCTTAAACGCCAATGTAAATAGAGAAAGCGTGTCCAGAGCTGTCAGGCAAAAGGTGAAACATCTCTaGATGAAGACAGCAAGGCTA +
Preference number: 5 (lower is better)
Translates to: WFLNANVNRESVSRAVRQKVKHL*MKTARL
Trigger: TAGCCTTGCTGTCTTCATCAAGAGATGTTTCACCTT...TTGCCTGACAGCTCTGGACACGCTTTCTCTATTTACATTGGCGTTTAAGAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp ATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGAAGGTGAAACATCTCTaGATGAAGACAGCAAGGCTA +
Preference number: 5 (lower is better)
Translates to: MAEGFQLLTITSRKRILRKVKHL*MKTARL
Trigger: TAGCCTTGCTGTCTTCATCAAGAGATGTTTCACCTT...CCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp CCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAAGTCAAGCTGGAGGTCTaGGTATCTTTGAATCCTGCC +
Preference number: 5 (lower is better)
Translates to: PGSLVQKLQWSVPLGHQKVKLEV*VSLNPA
Trigger: GGCAGGATTCAAAGATACCAAGACCTCCAGCTTGAC...TTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp ATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACACAATGTGCTACTTTGTaGGTGCTTATCCAGGGAATT +
Preference number: 5 (lower is better)
Translates to: IGFGKHPEFANDKASPHTQCATL*VLIQGI
Trigger: AATTCCCTGGATAAGCACCAACAAAGTAGCACATTG...TGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAACTGATGGAGCTCAGCTaGGAGTTACAGCACTTGAGA +
Preference number: 5 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKLMELS*ELQHLR
Trigger: TCTCAAGTGCTGTAACTCCAAGCTGAGCTCCATCAG...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTACTGTTGGCACAGTTGTaGATGATGGACAGGGACTGC +
Preference number: 5 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLLLAQL*MMDRDC
Trigger: GCAGTCCCTGTCCATCATCAACAACTGTGCCAACAG...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GACAGATATGATGACTTGCAAATGTGTCCGGACAAAGGACTTCTTTCCAGTGTAACCGTGCGTATCCTTTaGGTTAAGTCCTTCACATCA +
Preference number: 5 (lower is better)
Translates to: DRYDDLQMCPDKGLLSSVTVRIL*VKSFTS
Trigger: TGATGTGAAGGACTTAACCAAAAGGATACGCACGGT...TACACTGGAAAGAAGTCCTTTGTCCGGACACATTTGCAAGTCATCATATCTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000630992.2
CDS-3UTR CAA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAGAGAGATCGCCATTTTaGACATGGATCCTGGCCATG +
Preference number: 5 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKERSPF*TWILAM
Trigger: CATGGCCAGGATCCATGTCAAAAATGGCGATCTCTC...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCCGTGGACATAGCACATaGCTGCCTCTGAGAGATCGC +
Preference number: 5 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFRGHST*LPLRDR
Trigger: GCGATCTCTCAGAGGCAGCAATGTGCTATGTCCACG...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATCACCAGTTCCTTTTaGACACTTCTACTACTTGTC +
Preference number: 5 (lower is better)
Translates to: FQGMAEGFQLLTITSRKRITSSF*TLLLLV
Trigger: GACAAGTAGTAGAAGTGTCAAAAAGGAACTGGTGAT...TCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp AAGAATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACTCCTTAGGGTTGACCTaGCCAGAATCCTGTATCATT +
Preference number: 5 (lower is better)
Translates to: KNTQESNLDFKVLPHKCDSLGLT*PESCII
Trigger: AATGATACAGGATTCTGGCAAGGTCAACCCTAAGGA...GTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CAA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAATCCAGATCCTTAGGGTaGACCTTGCCAGAATCCTGT +
Preference number: 5 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNESRSLG*TLPESC
Trigger: ACAGGATTCTGGCAAGGTCAACCCTAAGGATCTGGA...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp ACTAAATCTCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTTCCAGATCCTTAGGGTaGACCTTGCCAGAATCCTGT +
Preference number: 5 (lower is better)
Translates to: TKSPGSLVQKLQWSVPLGSRSLG*TLPESC
Trigger: ACAGGATTCTGGCAAGGTCAACCCTAAGGATCTGGA...ACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGAGATTTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAATGAAGCGGCGGATGTaGTGGGATCTCTCAAACTCT +
Preference number: 5 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKMKRRM*WDLSNS
Trigger: AGAGTTTGAGAGATCCCACAACATCCGCCGCTTCAT...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp ATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACAGCAAGCTTCCACAAATaGCCTGAAAACTTCCTTAAG +
Preference number: 5 (lower is better)
Translates to: IGFGKHPEFANDKASPHTASFHK*PENFLK
Trigger: CTTAAGGAAGTTTTCAGGCAATTTGTGGAAGCTTGC...TGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp AAGAATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACGAGGGGTTTCAGTTGTaGACTATCACAAGCAGGAAA +
Preference number: 5 (lower is better)
Translates to: KNTQESNLDFKVLPHKCDEGFQL*TITSRK
Trigger: TTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTC...GTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS GCA 90 bp TCATGGGACAAAGTCAGGGAGAATCCAAGTCAAGGTAGAAGACGTTaGTGGTATAAGGACACCTTGTATATACTTGCATTTAGTACTCCA +
Preference number: 5 (lower is better)
Translates to: SWDKVRENPSQGRRR*WYKDTLYILAFSTP
Trigger: TGGAGTACTAAATGCAAGTATATACAAGGTGTCCTTATACCAGCAACGTCTTCTACCTTGACTTGGATTCTCCCTGACTTTGTCCCATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340449.7
CDS-3UTR CAA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGGCAGCATCCTCATCTTaGTCGACCTCCTCGTCAACT +
Preference number: 5 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLAASSS*STSSST
Trigger: AGTTGACGAGGAGGTCGACAAAGATGAGGATGCTGC...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAACTGTTCATGTTGCCTTaGTACAGCCAGCCATGCTTG +
Preference number: 5 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKLFMLP*YSQPCL
Trigger: CAAGCATGGCTGGCTGTACAAAGGCAACATGAACAG...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTAATGGCACTGTTCATGTaGCCTTTGTACAGCCAGCCA +
Preference number: 5 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLMALFM*PLYSQP
Trigger: TGGCTGGCTGTACAAAGGCAACATGAACAGTGCCAT...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAGGATCCATCGCCAAGTaGAATCAGGTGGAAAAATCG +
Preference number: 5 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKGSIAK*NQVEKS
Trigger: CGATTTTTCCACCTGATTCAACTTGGCGATGGATCC...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp AAGAATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACGCCATTTCGCTTTTCTaGCATTGCAGCTTCAAAGTT +
Preference number: 5 (lower is better)
Translates to: KNTQESNLDFKVLPHKCDAISLF*HCSFKV
Trigger: AACTTTGAAGCTGCAATGCAAGAAAAGCGAAATGGC...GTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp GCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGAAACCAGAACCTTCCAATTaGCTTTGTTCATCATCTTCG +
Preference number: 5 (lower is better)
Translates to: AEGFQLLTITSRKRILRKPEPSN*LCSSSS
Trigger: CGAAGATGATGAACAAAGCAAATTGGAAGGTTCTGG...TTTCCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp TTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGACTTTCACTTTTCAGTTaGATTTCTGCTTCTCTTGCA +
Preference number: 5 (lower is better)
Translates to: FQGMAEGFQLLTITSRKRLSLFS*ISASLA
Trigger: TGCAAGAGAAGCAGAAATCAAACTGAAAAGTGAAAG...TCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp CAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTTTCACTTTTCAGTTaGATTTCTGCTTCTCTTGCA +
Preference number: 5 (lower is better)
Translates to: QGMAEGFQLLTITSRKRILSLFS*ISASLA
Trigger: TGCAAGAGAAGCAGAAATCAAACTGAAAAGTGAAAG...TATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp TTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAGCAGAAATCTTCCGGTaGTATTTTATGTCAAACAGG +
Preference number: 5 (lower is better)
Translates to: LFQGMAEGFQLLTITSRKAEIFR*YFMSNR
Trigger: CCTGTTTGACATAAAATACAACCGGAAGATTTCTGC...TTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp GTCTTTTTAATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCTTTGGCATGCCTGCTaGGCATTCTTCAGCACCTTC +
Preference number: 5 (lower is better)
Translates to: VFLIQMWYRMFNYSRAVILWHAC*AFFSTF
Trigger: GAAGGTGCTGAAGAATGCCAAGCAGGCATGCCAAAG...AATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTATTAAAAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp ATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACATTGAGCATGTCATCATaGGATAGCTTATTGCTGTCT +
Preference number: 5 (lower is better)
Translates to: IGFGKHPEFANDKASPHTLSMSS*DSLLLS
Trigger: AGACAGCAATAAGCTATCCAATGATGACATGCTCAA...TGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp ATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGAAGTCTGCAAGTAACTaGAGCATGTCATCATTGGAT +
Preference number: 5 (lower is better)
Translates to: MAEGFQLLTITSRKRILRKSASN*SMSSLD
Trigger: ATCCAATGATGACATGCTCAAGTTACTTGCAGACTT...CCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp AATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACACGATTGTAATGTCTAGATaGCCTAAAATCACTGGGAGC +
Preference number: 5 (lower is better)
Translates to: NTQESNLDFKVLPHKCDTIVMSR*PKITGS
Trigger: GCTCCCAGTGATTTTAGGCAATCTAGACATTACAAT...CGTGTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp ATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACAATTGTAATGTCTAGATaGCCTAAAATCACTGGGAGC +
Preference number: 5 (lower is better)
Translates to: IGFGKHPEFANDKASPHTIVMSR*PKITGS
Trigger: GCTCCCAGTGATTTTAGGCAATCTAGACATTACAAT...TGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGCCAGGAGTAGCCAACTaGGGTTTCAACGACATCCCT +
Preference number: 5 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLPGVAN*GFNDIP
Trigger: AGGGATGTCGTTGAAACCCAAGTTGGCTACTCCTGG...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAAAATCGGCAGAAGGCTaGAGAATCGTGGTCATGGAT +
Preference number: 5 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKKSAEG*RIVVMD
Trigger: ATCCATGACCACGATTCTCAAGCCTTCTGCCGATTT...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
42% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAAATTCAAAGAGGGTCTTaGGGTCTCCAGGAGCAAAAC +
Preference number: 5 (lower is better)
Translates to: SSSRVSTTPLLRHNENFEIQRGS*GLQEQN
Trigger: GTTTTGCTCCTGGAGACCCAAAGACCCTCTTTGAAT...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAATTCAAAGAGGGTCTTaGGGTCTCCAGGAGCAAAAC +
Preference number: 5 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKIQRGS*GLQEQN
Trigger: GTTTTGCTCCTGGAGACCCAAAGACCCTCTTTGAAT...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp AAGAATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACGAGGTCTTGGTATCTTaGAATCCTGCCTTTTCCAAA +
Preference number: 5 (lower is better)
Translates to: KNTQESNLDFKVLPHKCDEVLVS*NPAFSK
Trigger: TTTGGAAAAGGCAGGATTCAAAGATACCAAGACCTC...GTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAATCCCAATGTGCTACTTaGTTGGTGCTTATCCAGGGA +
Preference number: 5 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNESQCAT*LVLIQG
Trigger: TCCCTGGATAAGCACCAACAAAGTAGCACATTGGGA...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTACTGATGGAGCTCAGCTaGGAGTTACAGCACTTGAGA +
Preference number: 5 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLLMELS*ELQHLR
Trigger: TCTCAAGTGCTGTAACTCCAAGCTGAGCTCCATCAG...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGCTGTTGGCACAGTTGTaGATGATGGACAGGGACTGC +
Preference number: 5 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLLLAQL*MMDRDC
Trigger: GCAGTCCCTGTCCATCATCAACAACTGTGCCAACAG...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAATAAGCCGGTCACTGTaGGCACAGTTGTTGATGATG +
Preference number: 5 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKISRSL*AQLLMM
Trigger: CATCATCAACAACTGTGCCAACAGTGACCGGCTTAT...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAAATCAGCACATCCTCGTaGAAATGGACATCCTGCATC +
Preference number: 5 (lower is better)
Translates to: SSSRVSTTPLLRHNENFEISTSS*KWTSCI
Trigger: GATGCAGGATGTCCATTTCAACGAGGATGTGCTGAT...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAATCCAGATCCTTAGGGTaGACCTTGCCAGAATCCTGT +
Preference number: 5 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKSRSLG*TLPESC
Trigger: ACAGGATTCTGGCAAGGTCAACCCTAAGGATCTGGA...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAAATGAAGCGGCGGATGTaGTGGGATCTCTCAAACTCT +
Preference number: 5 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKMKRRM*WDLSNS
Trigger: AGAGTTTGAGAGATCCCACAACATCCGCCGCTTCAT...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACGATATCGCTTTGTGTTaGTATCATCTAAGAAAGCTC +
Preference number: 5 (lower is better)
Translates to: VIGFGKHPEFANDKASPHDIALC*YHLRKL
Trigger: GAGCTTTCTTAGATGATACAAACACAAAGCGATATC...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GTGATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACTGTCAGGATATCGCTTaGTGTTTGTATCATCTAAGA +
Preference number: 5 (lower is better)
Translates to: VIGFGKHPEFANDKASPHCQDIA*CLYHLR
Trigger: TCTTAGATGATACAAACACAAAGCGATATCCTGACA...GTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp AAGAATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACGCAAGCTTCCACAAATaGCCTGAAAACTTCCTTAAG +
Preference number: 5 (lower is better)
Translates to: KNTQESNLDFKVLPHKCDASFHK*PENFLK
Trigger: CTTAAGGAAGTTTTCAGGCAATTTGTGGAAGCTTGC...GTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CAA 90 bp ATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACAGTGTCTACCACACCTTaGTTAAGACACAATGAAAAC +
Preference number: 5 (lower is better)
Translates to: IGFGKHPEFANDKASPHTVSTTP*LRHNEN
Trigger: GTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACAC...TGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GTCTTTTTAATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTATGGCATCAGGAGATTaGGACTCTGTGTCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: VFLIQMWYRMFNYSRAVIMASGD*DSVSGS
Trigger: GCTGCCAGACACAGAGTCCAAATCTCCTGATGCCAT...AATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTATTAAAAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS CCA 90 bp GAGTCGCCATTTCGCTTTTCTTGCATTGCAGCTTCAAAGTTGAGCTaGAGGATCTTATTTAGAATTGTGATCCATTCTTCCATTTCCACT +
Preference number: 5 (lower is better)
Translates to: ESPFRFSCIAASKLS*RILFRIVIHSSIST
Trigger: AGTGGAAATGGAAGAATGGATCACAATTCTAAATAAGATCCTCCAGCTCAACTTTGAAGCTGCAATGCAAGAAAAGCGAAATGGCGACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000339416.7
ENST00000376460.5
ENST00000427887.2
ENST00000442173.5
ENST00000448493.7
ENST00000627024.2
ENST00000630992.2
ENST00000652315.1
ENST00000682017.1
CDS-3UTR CAA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTATCCAACTTGACCACTTaGTTCGGAAGCTGTCGAAAC +
Preference number: 5 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLSNLTT*FGSCRN
Trigger: GTTTCGACAGCTTCCGAACAAAGTGGTCAAGTTGGA...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAGGAAGTTTATCCAACTaGACCACTTTGTTCGGAAGC +
Preference number: 5 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNEGSLSN*TTLFGS
Trigger: GCTTCCGAACAAAGTGGTCAAGTTGGATAAACTTCC...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp CCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAAGGAAGTTTATCCAACTaGACCACTTTGTTCGGAAGC +
Preference number: 5 (lower is better)
Translates to: PGSLVQKLQWSVPLGHQKGSLSN*TTLFGS
Trigger: GCTTCCGAACAAAGTGGTCAAGTTGGATAAACTTCC...TTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAAGGAAGTTTATCCAACTaGACCACTTTGTTCGGAAGC +
Preference number: 5 (lower is better)
Translates to: SSSRVSTTPLLRHNENFEGSLSN*TTLFGS
Trigger: GCTTCCGAACAAAGTGGTCAAGTTGGATAAACTTCC...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCATGGCACTGTTCATGTaGCCTTTGTACAGCCAGCCA +
Preference number: 5 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFMALFM*PLYSQP
Trigger: TGGCTGGCTGTACAAAGGCAACATGAACAGTGCCAT...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TTATTTCAGGGCATGGCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGGAATCCAGAAATATaGATCCTTTTGGTTCTTTGG +
Preference number: 5 (lower is better)
Translates to: LFQGMAEGFQLLTITSRKRNPEI*ILLVLW
Trigger: CCAAAGAACCAAAAGGATCAATATTTCTGGATTCCT...TTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGCCATGCCCTGAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp GCTGAGGGGTTTCAGTTGTTGACTATCACAAGCAGGAAAAGAATACTCAGGAAAATTGCAGCTTCAAAGTaGAGCTGGAGGATCTTATTT +
Preference number: 5 (lower is better)
Translates to: AEGFQLLTITSRKRILRKIAASK*SWRILF
Trigger: AAATAAGATCCTCCAGCTCAACTTTGAAGCTGCAAT...TTTCCTGAGTATTCTTTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp AAGAATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACGCAGAAATCTTCCGGTaGTATTTTATGTCAAACAGG +
Preference number: 5 (lower is better)
Translates to: KNTQESNLDFKVLPHKCDAEIFR*YFMSNR
Trigger: CCTGTTTGACATAAAATACAACCGGAAGATTTCTGC...GTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAAAAGGCTGAGTGTGTTTaGGTATGCAGGGCACAAATT +
Preference number: 5 (lower is better)
Translates to: SSSRVSTTPLLRHNENFEKAECV*VCRAQI
Trigger: AATTTGTGCCCTGCATACCAAAACACACTCAGCCTT...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp ACTAAATCTCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCTTCCTTTACTTGAGTaGTCACAGCTGACATGGAAG +
Preference number: 5 (lower is better)
Translates to: TKSPGSLVQKLQWSVPLGLPLLE*SQLTWK
Trigger: CTTCCATGTCAGCTGTGACAACTCAAGTAAAGGAAG...ACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGAGATTTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAACTTCCTTTACTTGAGTaGTCACAGCTGACATGGAAG +
Preference number: 5 (lower is better)
Translates to: SSSRVSTTPLLRHNENFELPLLE*SQLTWK
Trigger: CTTCCATGTCAGCTGTGACAACTCAAGTAAAGGAAG...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAATTTTCAGCAGTGGCTaGCCTCCATCTACCCATTTA +
Preference number: 5 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKIFSSG*PPSTHL
Trigger: TAAATGGGTAGATGGAGGCAAGCCACTGCTGAAAAT...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTAAAATCGGCAGAAGGCTaGAGAATCGTGGTCATGGAT +
Preference number: 5 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLKSAEG*RIVVMD
Trigger: ATCCATGACCACGATTCTCAAGCCTTCTGCCGATTT...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp ACTAAATCTCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTTTGCCTGATGGCTCCTaGAAGCATATCTGTCATCAA +
Preference number: 5 (lower is better)
Translates to: TKSPGSLVQKLQWSVPLGLPDGS*KHICHQ
Trigger: TTGATGACAGATATGCTTCAAGGAGCCATCAGGCAA...ACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGAGATTTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAATCCCAATGTGCTACTTaGTTGGTGCTTATCCAGGGA +
Preference number: 5 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKSQCAT*LVLIQG
Trigger: TCCCTGGATAAGCACCAACAAAGTAGCACATTGGGA...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACCTCAGTAGCAATGTaGGCTTCAAGTAATGACTGG +
Preference number: 5 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKTSVAM*ASSNDW
Trigger: CCAGTCATTACTTGAAGCCAACATTGCTACTGAGGT...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCCTGATGGAGCTCAGCTaGGAGTTACAGCACTTGAGA +
Preference number: 5 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFLMELS*ELQHLR
Trigger: TCTCAAGTGCTGTAACTCCAAGCTGAGCTCCATCAG...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCTCACTGTTGGCACAGTaGTTGATGATGGACAGGGAC +
Preference number: 5 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFSLLAQ*LMMDRD
Trigger: GTCCCTGTCCATCATCAACAACTGTGCCAACAGTGA...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAAACCGTGCGTATCCTTTaGGTTAAGTCCTTCACATCA +
Preference number: 5 (lower is better)
Translates to: SSSRVSTTPLLRHNENFETVRIL*VKSFTS
Trigger: TGATGTGAAGGACTTAACCAAAAGGATACGCACGGT...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAACCGTGCGTATCCTTTaGGTTAAGTCCTTCACATCA +
Preference number: 5 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNETVRIL*VKSFTS
Trigger: TGATGTGAAGGACTTAACCAAAAGGATACGCACGGT...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GTCTTTTTAATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTGAGAGATCGCCATTTTaGACATGGATCCTGGCCATG +
Preference number: 5 (lower is better)
Translates to: VFLIQMWYRMFNYSRAVIERSPF*TWILAM
Trigger: CATGGCCAGGATCCATGTCAAAAATGGCGATCTCTC...AATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTATTAAAAAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAATCCTTAGGGTTGACCTaGCCAGAATCCTGTATCATT +
Preference number: 5 (lower is better)
Translates to: SSSRVSTTPLLRHNENFESLGLT*PESCII
Trigger: AATGATACAGGATTCTGGCAAGGTCAACCCTAAGGA...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGATGAAGCGGCGGATGTaGTGGGATCTCTCAAACTCT +
Preference number: 5 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLMKRRM*WDLSNS
Trigger: AGAGTTTGAGAGATCCCACAACATCCGCCGCTTCAT...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GTCTTTTTAATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTATGAAGCGGCGGATGTaGTGGGATCTCTCAAACTCT +
Preference number: 5 (lower is better)
Translates to: VFLIQMWYRMFNYSRAVIMKRRM*WDLSNS
Trigger: AGAGTTTGAGAGATCCCACAACATCCGCCGCTTCAT...AATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTATTAAAAAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp ATTGGCTTTGGAAAGCATCCTGAGTTTGCAAATGACAAAGCAAGTCCCCACACAGATATCGCTTTGTGTTaGTATCATCTAAGAAAGCTC +
Preference number: 5 (lower is better)
Translates to: IGFGKHPEFANDKASPHTDIALC*YHLRKL
Trigger: GAGCTTTCTTAGATGATACAAACACAAAGCGATATC...TGTGTGGGGACTTGCTTTGTCATTTGCAAACTCAGGATGCTTTCCAAAGCCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GACAGATATGATGACTTGCAAATGTGTCCGGACAAAGGACTTCTTTCCAGTGTAGTGTCTACCACACCTTaGTTAAGACACAATGAAAAC +
Preference number: 5 (lower is better)
Translates to: DRYDDLQMCPDKGLLSSVVSTTP*LRHNEN
Trigger: GTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACAC...TACACTGGAAAGAAGTCCTTTGTCCGGACACATTTGCAAGTCATCATATCTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CAA 90 bp CCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAAGAGGGGTTTCAGTTGTaGACTATCACAAGCAGGAAA +
Preference number: 5 (lower is better)
Translates to: PGSLVQKLQWSVPLGHQKEGFQL*TITSRK
Trigger: TTTCCTGCTTGTGATAGTCAACAACTGAAACCCCTC...TTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CAA 90 bp ATTCCAAGCACACTTGATATCTTTCTCACACTGGCTATGTATCGCTTCCCCATGGGACTGGTATTATTATaGCAGGATAAATTTGGGCAT +
Preference number: 5 (lower is better)
Translates to: IPSTLDIFLTLAMYRFPMGLVLL*QDKFGH
Trigger: ATGCCCAAATTTATCCTGCAATAATAATACCAGTCC...CATGGGGAAGCGATACATAGCCAGTGTGAGAAAGATATCAAGTGTGCTTGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CAA 90 bp ATTCCAAGCACACTTGATATCTTTCTCACACTGGCTATGTATCGCTTCCCCATGAAAAGAAGCAAAGGCTaGAACATGGTTTCATTAAGC +
Preference number: 5 (lower is better)
Translates to: IPSTLDIFLTLAMYRFPMKRSKG*NMVSLS
Trigger: GCTTAATGAAACCATGTTCAAGCCTTTGCTTCTTTT...CATGGGGAAGCGATACATAGCCAGTGTGAGAAAGATATCAAGTGTGCTTGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CAA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGGGATCCATCGCCAAGTaGAATCAGGTGGAAAAATCG +
Preference number: 5 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLGSIAK*NQVEKS
Trigger: CGATTTTTCCACCTGATTCAACTTGGCGATGGATCC...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp AAGAATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACAGGAATCCAGAAATATaGATCCTTTTGGTTCTTTGG +
Preference number: 5 (lower is better)
Translates to: KNTQESNLDFKVLPHKCDRNPEI*ILLVLW
Trigger: CCAAAGAACCAAAAGGATCAATATTTCTGGATTCCT...GTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp CCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACCAGAACCTTCCAATTaGCTTTGTTCATCATCTTCG +
Preference number: 5 (lower is better)
Translates to: PGSLVQKLQWSVPLGHQKPEPSN*LCSSSS
Trigger: CGAAGATGATGAACAAAGCAAATTGGAAGGTTCTGG...TTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAACCAGAACCTTCCAATTaGCTTTGTTCATCATCTTCG +
Preference number: 5 (lower is better)
Translates to: SSSRVSTTPLLRHNENFEPEPSN*LCSSSS
Trigger: CGAAGATGATGAACAAAGCAAATTGGAAGGTTCTGG...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp AAGAATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACGATAAATCATTGCACTaGACAAGGATCCTTTTTCCA +
Preference number: 5 (lower is better)
Translates to: KNTQESNLDFKVLPHKCDDKSLH*TRILFP
Trigger: TGGAAAAAGGATCCTTGTCAAGTGCAATGATTTATC...GTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000627024.2
ENST00000630992.2
CDS-3UTR CAA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTATACTTCAGTAGTTTGTaGCTGGTGAGGAAATCGGCA +
Preference number: 5 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLYFSSL*LVRKSA
Trigger: TGCCGATTTCCTCACCAGCAACAAACTACTGAAGTA...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAACGCAGCAACTTAACTTaGGAGTTCTCTATCAAATGC +
Preference number: 5 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNERSNLT*EFSIKC
Trigger: GCATTTGATAGAGAACTCCAAAGTTAAGTTGCTGCG...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAACGCAGCAACTTAACTTaGGAGTTCTCTATCAAATGC +
Preference number: 5 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKRSNLT*EFSIKC
Trigger: GCATTTGATAGAGAACTCCAAAGTTAAGTTGCTGCG...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp CCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACGCAGCAACTTAACTTaGGAGTTCTCTATCAAATGC +
Preference number: 5 (lower is better)
Translates to: PGSLVQKLQWSVPLGHQKRSNLT*EFSIKC
Trigger: GCATTTGATAGAGAACTCCAAAGTTAAGTTGCTGCG...TTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp ACTAAATCTCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTAAGGTGAAACATCTCTaGATGAAGACAGCAAGGCTA +
Preference number: 5 (lower is better)
Translates to: TKSPGSLVQKLQWSVPLGKVKHL*MKTARL
Trigger: TAGCCTTGCTGTCTTCATCAAGAGATGTTTCACCTT...ACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGAGATTTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAAAGGTGAAACATCTCTaGATGAAGACAGCAAGGCTA +
Preference number: 5 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKKVKHL*MKTARL
Trigger: TAGCCTTGCTGTCTTCATCAAGAGATGTTTCACCTT...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAGAGGTCTTGGTATCTTaGAATCCTGCCTTTTCCAAA +
Preference number: 5 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKEVLVS*NPAFSK
Trigger: TTTGGAAAAGGCAGGATTCAAAGATACCAAGACCTC...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAGAGGTCTTGGTATCTTaGAATCCTGCCTTTTCCAAA +
Preference number: 5 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNEEVLVS*NPAFSK
Trigger: TTTGGAAAAGGCAGGATTCAAAGATACCAAGACCTC...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTATTGCCTGATGGCTCCTaGAAGCATATCTGTCATCAA +
Preference number: 5 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLLPDGS*KHICHQ
Trigger: TTGATGACAGATATGCTTCAAGGAGCCATCAGGCAA...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAATGTTTGGAGTTGAGGTaGTATATGGAGAAGCAATGC +
Preference number: 5 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNECLELR*YMEKQC
Trigger: GCATTGCTTCTCCATATACAACCTCAACTCCAAACA...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000652315.1
CDS-3UTR CAA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAAGCATTTCTCACACTGTaGATGTTTGGAGTTGAGGTT +
Preference number: 5 (lower is better)
Translates to: SSSRVSTTPLLRHNENFEAFLTL*MFGVEV
Trigger: AACCTCAACTCCAAACATCAACAGTGTGAGAAATGC...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAGCATTTCTCACACTGTaGATGTTTGGAGTTGAGGTT +
Preference number: 5 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKAFLTL*MFGVEV
Trigger: AACCTCAACTCCAAACATCAACAGTGTGAGAAATGC...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAACAATGTGCTACTTTGTaGGTGCTTATCCAGGGAATT +
Preference number: 5 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKQCATL*VLIQGI
Trigger: AATTCCCTGGATAAGCACCAACAAAGTAGCACATTG...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAAACCTCAGTAGCAATGTaGGCTTCAAGTAATGACTGG +
Preference number: 5 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKTSVAM*ASSNDW
Trigger: CCAGTCATTACTTGAAGCCAACATTGCTACTGAGGT...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAGACAGATATGATGACTaGCAAATGTGTCCGGACAAA +
Preference number: 5 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNEDRYDD*QMCPDK
Trigger: TTTGTCCGGACACATTTGCAAGTCATCATATCTGTC...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCATCAGCACATCCTCGTaGAAATGGACATCCTGCATC +
Preference number: 5 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFISTSS*KWTSCI
Trigger: GATGCAGGATGTCCATTTCAACGAGGATGTGCTGAT...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp AAGAATACTCAGGAAAGCAACTTAGACTTCAAGGTCCTACCACACAAGTGTGACGATATCGCTTTGTGTTaGTATCATCTAAGAAAGCTC +
Preference number: 5 (lower is better)
Translates to: KNTQESNLDFKVLPHKCDDIALC*YHLRKL
Trigger: GAGCTTTCTTAGATGATACAAACACAAAGCGATATC...GTCACACTTGTGTGGTAGGACCTTGAAGTCTAAGTTGCTTTCCTGAGTATTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630992.2
CDS-3UTR CAA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAGCAAGCTTCCACAAATaGCCTGAAAACTTCCTTAAG +
Preference number: 5 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKASFHK*PENFLK
Trigger: CTTAAGGAAGTTTTCAGGCAATTTGTGGAAGCTTGC...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS TCA 90 bp TTTATCCAACTTGACCACTTTGTTCGGAAGCTGTCGAAACTCTCCTaGGTAATCTTCATATTTATAGTTCACAAGATGCCAGTCAGAGTT +
Preference number: 5 (lower is better)
Translates to: FIQLDHFVRKLSKLS*VIFIFIVHKMPVRV
Trigger: AACTCTGACTGGCATCTTGTGAACTATAAATATGAAGATTACTCAGGAGAGTTTCGACAGCTTCCGAACAAAGTGGTCAAGTTGGATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339416.7
ENST00000376460.5
ENST00000427887.2
ENST00000442173.5
ENST00000448493.7
ENST00000627024.2
ENST00000630992.2
ENST00000652315.1
ENST00000682017.1
CDS TCA 90 bp TTGGGACAGAAATCTTCAGCTTCTCACATTCACTGTTTTAAGCTGTaGGGCATTTTATTCTACTTGGCACAATATTCTCCAAATGCCATC +
Preference number: 5 (lower is better)
Translates to: LGQKSSASHIHCFKL*GILFYLAQYSPNAI
Trigger: GATGGCATTTGGAGAATATTGTGCCAAGTAGAATAAAATGCCTCACAGCTTAAAACAGTGAATGTGAGAAGCTGAAGATTTCTGTCCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340449.7
CDS-3UTR CAA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAAGCCATTTCGCTTTTCTaGCATTGCAGCTTCAAAGTT +
Preference number: 5 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKAISLF*HCSFKV
Trigger: AACTTTGAAGCTGCAATGCAAGAAAAGCGAAATGGC...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTAGCCATTTCGCTTTTCTaGCATTGCAGCTTCAAAGTT +
Preference number: 5 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLAISLF*HCSFKV
Trigger: AACTTTGAAGCTGCAATGCAAGAAAAGCGAAATGGC...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAAAAGTCTGCAAGTAACTaGAGCATGTCATCATTGGAT +
Preference number: 5 (lower is better)
Translates to: SSSRVSTTPLLRHNENFEKSASN*SMSSLD
Trigger: ATCCAATGATGACATGCTCAAGTTACTTGCAGACTT...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp ACTAAATCTCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTAAGTCTGCAAGTAACTaGAGCATGTCATCATTGGAT +
Preference number: 5 (lower is better)
Translates to: TKSPGSLVQKLQWSVPLGKSASN*SMSSLD
Trigger: ATCCAATGATGACATGCTCAAGTTACTTGCAGACTT...ACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGAGATTTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAAATTGTAATGTCTAGATaGCCTAAAATCACTGGGAGC +
Preference number: 5 (lower is better)
Translates to: SSSRVSTTPLLRHNENFEIVMSR*PKITGS
Trigger: GCTCCCAGTGATTTTAGGCAATCTAGACATTACAAT...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp ACTAAATCTCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTATTGTAATGTCTAGATaGCCTAAAATCACTGGGAGC +
Preference number: 5 (lower is better)
Translates to: TKSPGSLVQKLQWSVPLGIVMSR*PKITGS
Trigger: GCTCCCAGTGATTTTAGGCAATCTAGACATTACAAT...ACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGAGATTTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGAAGGCTGAGTGTGTTTaGGTATGCAGGGCACAAATT +
Preference number: 5 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLKAECV*VCRAQI
Trigger: AATTTGTGCCCTGCATACCAAAACACACTCAGCCTT...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGATCGTGGTCATGGATTaGGTCAGTTCTTCATGCACT +
Preference number: 5 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLIVVMD*VSSSCT
Trigger: AGTGCATGAAGAACTGACCAAATCCATGACCACGAT...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GTCTTTTTAATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTATCGTGGTCATGGATTaGGTCAGTTCTTCATGCACT +
Preference number: 5 (lower is better)
Translates to: VFLIQMWYRMFNYSRAVIIVVMD*VSSSCT
Trigger: AGTGCATGAAGAACTGACCAAATCCATGACCACGAT...AATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTATTAAAAAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGTACTTCAGTAGTTTGTaGCTGGTGAGGAAATCGGCA +
Preference number: 5 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLYFSSL*LVRKSA
Trigger: TGCCGATTTCCTCACCAGCAACAAACTACTGAAGTA...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAAGAGGTCTTGGTATCTTaGAATCCTGCCTTTTCCAAA +
Preference number: 5 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKEVLVS*NPAFSK
Trigger: TTTGGAAAAGGCAGGATTCAAAGATACCAAGACCTC...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAAGCATTTCTCACACTGTaGATGTTTGGAGTTGAGGTT +
Preference number: 5 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKAFLTL*MFGVEV
Trigger: AACCTCAACTCCAAACATCAACAGTGTGAGAAATGC...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGACCGTGCGTATCCTTTaGGTTAAGTCCTTCACATCA +
Preference number: 5 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLTVRIL*VKSFTS
Trigger: TGATGTGAAGGACTTAACCAAAAGGATACGCACGGT...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCACCGTGCGTATCCTTTaGGTTAAGTCCTTCACATCA +
Preference number: 5 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFTVRIL*VKSFTS
Trigger: TGATGTGAAGGACTTAACCAAAAGGATACGCACGGT...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCTCCTTAGGGTTGACCTaGCCAGAATCCTGTATCATT +
Preference number: 5 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFSLGLT*PESCII
Trigger: AATGATACAGGATTCTGGCAAGGTCAACCCTAAGGA...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGTCCTTAGGGTTGACCTaGCCAGAATCCTGTATCATT +
Preference number: 5 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLSLGLT*PESCII
Trigger: AATGATACAGGATTCTGGCAAGGTCAACCCTAAGGA...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAAAGCAGCTTCACTTTATaGTCAGGATATCGCTTTGTG +
Preference number: 5 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKSSFTL*SGYRFV
Trigger: CACAAAGCGATATCCTGACAATAAAGTGAAGCTGCT...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTAGCAAGCTTCCACAAATaGCCTGAAAACTTCCTTAAG +
Preference number: 5 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLASFHK*PENFLK
Trigger: CTTAAGGAAGTTTTCAGGCAATTTGTGGAAGCTTGC...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAGTGTCTACCACACCTTaGTTAAGACACAATGAAAAC +
Preference number: 5 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNEVSTTP*LRHNEN
Trigger: GTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACAC...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAAGTGTCTACCACACCTTaGTTAAGACACAATGAAAAC +
Preference number: 5 (lower is better)
Translates to: SSSRVSTTPLLRHNENFEVSTTP*LRHNEN
Trigger: GTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACAC...TTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAGTGTCTACCACACCTTaGTTAAGACACAATGAAAAC +
Preference number: 5 (lower is better)
Translates to: SWFTGTKITMVSSLRSSKVSTTP*LRHNEN
Trigger: GTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACAC...TTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTAATTGCAGCTTCAAAGTaGAGCTGGAGGATCTTATTT +
Preference number: 5 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLIAASK*SWRILF
Trigger: AAATAAGATCCTCCAGCTCAACTTTGAAGCTGCAAT...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GTCTTTTTAATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGAACCTTCCAATTaGCTTTGTTCATCATCTTCG +
Preference number: 5 (lower is better)
Translates to: VFLIQMWYRMFNYSRAVIPEPSN*LCSSSS
Trigger: CGAAGATGATGAACAAAGCAAATTGGAAGGTTCTGG...AATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTATTAAAAAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp ACTAAATCTCCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCTTTCACTTTTCAGTTaGATTTCTGCTTCTCTTGCA +
Preference number: 5 (lower is better)
Translates to: TKSPGSLVQKLQWSVPLGLSLFS*ISASLA
Trigger: TGCAAGAGAAGCAGAAATCAAACTGAAAAGTGAAAG...ACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGGAGATTTAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp AAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAACTTTCACTTTTCAGTTaGATTTCTGCTTCTCTTGCA +
Preference number: 5 (lower is better)
Translates to: KSKSSSRVSTTPLLRHNELSLFS*ISASLA
Trigger: TGCAAGAGAAGCAGAAATCAAACTGAAAAGTGAAAG...TTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGCGCAGCAACTTAACTTaGGAGTTCTCTATCAAATGC +
Preference number: 5 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLRSNLT*EFSIKC
Trigger: GCATTTGATAGAGAACTCCAAAGTTAAGTTGCTGCG...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GTCTTTTTAATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTTGTTTGGAGTTGAGGTaGTATATGGAGAAGCAATGC +
Preference number: 5 (lower is better)
Translates to: VFLIQMWYRMFNYSRAVICLELR*YMEKQC
Trigger: GCATTGCTTCTCCATATACAACCTCAACTCCAAACA...AATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTATTAAAAAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000652315.1
CDS-3UTR CAA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCGCATTTCTCACACTGTaGATGTTTGGAGTTGAGGTT +
Preference number: 5 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFAFLTL*MFGVEV
Trigger: AACCTCAACTCCAAACATCAACAGTGTGAGAAATGC...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCCAATGTGCTACTTTGTaGGTGCTTATCCAGGGAATT +
Preference number: 5 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFQCATL*VLIQGI
Trigger: AATTCCCTGGATAAGCACCAACAAAGTAGCACATTG...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAAATCACCAGTTCCTTTTaGACACTTCTACTACTTGTC +
Preference number: 5 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKITSSF*TLLLLV
Trigger: GACAAGTAGTAGAAGTGTCAAAAAGGAACTGGTGAT...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000630992.2
CDS-3UTR CAA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGAGCAGCTTCACTTTATaGTCAGGATATCGCTTTGTG +
Preference number: 5 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLSSFTL*SGYRFV
Trigger: CACAAAGCGATATCCTGACAATAAAGTGAAGCTGCT...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp CCTGGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAATTGGTTCTAAACTGCTaGACTAGTTTTAAGCTCACA +
Preference number: 5 (lower is better)
Translates to: PGSLVQKLQWSVPLGHQKLVLNC*TSFKLT
Trigger: TGTGAGCTTAAAACTAGTCAAGCAGTTTAGAACCAA...TTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACCAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp TGGTCAGTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCATTGCAGCTTCAAAGTaGAGCTGGAGGATCTTATTT +
Preference number: 5 (lower is better)
Translates to: WSVPLGHQKLVTKIVLVFIAASK*SWRILF
Trigger: AAATAAGATCCTCCAGCTCAACTTTGAAGCTGCAAT...GAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAACTGACCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGATTGCAGCTTCAAAGTaGAGCTGGAGGATCTTATTT +
Preference number: 5 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLIAASK*SWRILF
Trigger: AAATAAGATCCTCCAGCTCAACTTTGAAGCTGCAAT...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GGTTCACTGGTACAAAAATTACAATGGTCAGTTCCCTTAGGTCATCAAAAACTAGATAAATCATTGCACTaGACAAGGATCCTTTTTCCA +
Preference number: 5 (lower is better)
Translates to: GSLVQKLQWSVPLGHQKLDKSLH*TRILFP
Trigger: TGGAAAAAGGATCCTTGTCAAGTGCAATGATTTATC...TAGTTTTTGATGACCTAAGGGAACTGACCATTGTAATTTTTGTACCAGTGAACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GTCTTTTTAATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTAAGTCTGCAAGTAACTaGAGCATGTCATCATTGGAT +
Preference number: 5 (lower is better)
Translates to: VFLIQMWYRMFNYSRAVIKSASN*SMSSLD
Trigger: ATCCAATGATGACATGCTCAAGTTACTTGCAGACTT...AATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTATTAAAAAGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp ATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTCCAGTTAAATGTCAGGATATCGCTTaGTGTTTGTATCATCTAAGA +
Preference number: 5 (lower is better)
Translates to: IQMWYRMFNYSRAVIPVKCQDIA*CLYHLR
Trigger: TCTTAGATGATACAAACACAAAGCGATATCCTGACA...TTTAACTGGAATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGAGGAATCCAGAAATATaGATCCTTTTGGTTCTTTGG +
Preference number: 5 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLRNPEI*ILLVLW
Trigger: CCAAAGAACCAAAAGGATCAATATTTCTGGATTCCT...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GTCTTTTTAATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTGATAAATCATTGCACTaGACAAGGATCCTTTTTCCA +
Preference number: 5 (lower is better)
Translates to: VFLIQMWYRMFNYSRAVIDKSLH*TRILFP
Trigger: TGGAAAAAGGATCCTTGTCAAGTGCAATGATTTATC...AATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTATTAAAAAGAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GTCTTTTTAATACAGATGTGGTACAGAATGTTTAATTACAGCAGGGCAGTGATTTTGGTTCTAAACTGCTaGACTAGTTTTAAGCTCACA +
Preference number: 5 (lower is better)
Translates to: VFLIQMWYRMFNYSRAVILVLNC*TSFKLT
Trigger: TGTGAGCTTAAAACTAGTCAAGCAGTTTAGAACCAA...AATCACTGCCCTGCTGTAATTAAACATTCTGTACCACATCTGTATTAAAAAGAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS-3UTR CAA 90 bp GTTCCCTTAGGTCATCAAAAACTAGTCACAAAAATAGTTCTTGTATTCAACCTGTTGGTTCTAAACTGCTaGACTAGTTTTAAGCTCACA +
Preference number: 5 (lower is better)
Translates to: VPLGHQKLVTKIVLVFNLLVLNC*TSFKLT
Trigger: TGTGAGCTTAAAACTAGTCAAGCAGTTTAGAACCAA...CAGGTTGAATACAAGAACTATTTTTGTGACTAGTTTTTGATGACCTAAGGGAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000376460.5
ENST00000400228.6
ENST00000442173.5
ENST00000448493.7
ENST00000630992.2
ENST00000652315.1
CDS TCA 72 bp GCTCGGCCGCCGTGCCCGGCTTACTCAGCGCCCGGGTaGACTTCCGAGTCTCCGCCGAGGCGGGGAGCAGCG +
Preference number: 6 (lower is better)
Translates to: ARPPCPAYSAPG*TSESPPRRGAA
Trigger: CGCTGCTCCCCGCCTCGGCGGAGACTCGGAAGTTCACCCGGGCGCTGAGTAAGCCGGGCACGGCGGCCGAGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427887.2
ENST00000479769.1
ENST00000652315.1
CDS CAA 90 bp GAAGCAATGCCGGAGATGGCGCCCAGCAGGTCCTTGTGCAGGCTGTaGTCCAGGGTGCTTCCCTTCTGCGGCGTCACCAGCGGATTCACA +
Preference number: 6 (lower is better)
Translates to: EAMPEMAPSRSLCRL*SRVLPFCGVTSGFT
Trigger: TGTGAATCCGCTGGTGACGCCGCAGAAGGGAAGCACCCTGGACAACAGCCTGCACAAGGACCTGCTGGGCGCCATCTCCGGCATTGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339416.7
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000652315.1
ENST00000682017.1
CDS CAA 72 bp GGAGAAGCAATGCCGGAGATGGCGCCCAGCAGGTCCTaGTGCAGGCTGTTGTCCAGGGTGCTTCCCTTCTGC +
Preference number: 6 (lower is better)
Translates to: GEAMPEMAPSRS*CRLLSRVLPFC
Trigger: GCAGAAGGGAAGCACCCTGGACAACAGCCTGCACAAGGACCTGCTGGGCGCCATCTCCGGCATTGCTTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339416.7
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000472874.1
ENST00000652315.1
ENST00000682017.1
CDS CCA 72 bp CATGGCGGCTTCATGAAGGATGCCCTTGAGGACAGATaGGCTCTGCCCACTGCCATTCATCAGCGCCGGGGA +
Preference number: 6 (lower is better)
Translates to: HGGFMKDALEDR*ALPTAIHQRRG
Trigger: TCCCCGGCGCTGATGAATGGCAGTGGGCAGAGCCCATCTGTCCTCAAGGGCATCCTTCATGAAGCCGCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000339416.7
ENST00000376460.5
ENST00000427887.2
ENST00000442173.5
ENST00000448493.7
ENST00000627024.2
ENST00000630992.2
ENST00000652315.1
ENST00000682017.1
CDS CAA 90 bp GTTGTATATGGAGAAGCAATGCCGGAGATGGCGCCCAGCAGGTCCTaGTGCAGGCTGTTGTCCAGGGTGCTTCCCTTCTGCGGCGTCACC +
Preference number: 6 (lower is better)
Translates to: VVYGEAMPEMAPSRS*CRLLSRVLPFCGVT
Trigger: GGTGACGCCGCAGAAGGGAAGCACCCTGGACAACAGCCTGCACAAGGACCTGCTGGGCGCCATCTCCGGCATTGCTTCTCCATATACAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339416.7
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000652315.1
ENST00000682017.1
CDS TCA 72 bp TCACCAGAGCAGATGAAAATGAGACCAGGGCTGCAATaGCACCTGTCCCCTGTCCCGGAGCCAACCGTCCCC +
Preference number: 6 (lower is better)
Translates to: SPEQMKMRPGLQ*HLSPVPEPTVP
Trigger: GGGGACGGTTGGCTCCGGGACAGGGGACAGGTGTCATTGCAGCCCTGGTCTCATTTTCATCTGCTCTGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340449.7
CDS GCA 72 bp AAGTCTGCAACTGGAACAGCTGCGAGTCCCTGGCCGTaGAAGGCACAGGCATGCCAGTGGTCCAAGGAAGGA +
Preference number: 6 (lower is better)
Translates to: KSATGTAASPWP*KAQACQWSKEG
Trigger: TCCTTCCTTGGACCACTGGCATGCCTGTGCCTTGCACGGCCAGGGACTCGCAGCTGTTCCAGTTGCAGACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000442173.5
ENST00000627024.2
ENST00000630992.2
ENST00000682017.1
CDS CCA 72 bp GGCTCTGCCCACTGCCATTCATCAGCGCCGGGGACGTaGTGGCGAGCATTTGCCTCACTGAGAAATGGTTCA +
Preference number: 6 (lower is better)
Translates to: GSAHCHSSAPGT*WRAFASLRNGS
Trigger: TGAACCATTTCTCAGTGAGGCAAATGCTCGCCACCACGTCCCCGGCGCTGATGAATGGCAGTGGGCAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000339416.7
ENST00000376460.5
ENST00000427887.2
ENST00000442173.5
ENST00000448493.7
ENST00000627024.2
ENST00000630992.2
ENST00000652315.1
ENST00000682017.1
CDS CCA 72 bp GCGCTATGGCTGTGGGGGAGAAGGGGCGGCTCCCACTaGACTGCTTCTAAACATGAGGAAATGCATCACCTG +
Preference number: 6 (lower is better)
Translates to: ALWLWGRRGGSH*TASKHEEMHHL
Trigger: CAGGTGATGCATTTCCTCATGTTTAGAAGCAGTCCAGTGGGAGCCGCCCCTTCTCCCCCACAGCCATAGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481051.1
CDS CAA 90 bp CACCTGTCCCCTGTCCCGGAGCCAACCGTCCCCCTCACTGTGTTATaGTGTGTAGGAGAACAGGGACATGCATGGACTATCATCGACTGC +
Preference number: 6 (lower is better)
Translates to: HLSPVPEPTVPLTVL*CVGEQGHAWTIIDC
Trigger: GCAGTCGATGATAGTCCATGCATGTCCCTGTTCTCCTACACACAATAACACAGTGAGGGGGACGGTTGGCTCCGGGACAGGGGACAGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340449.7
CDS TCA 72 bp GCTCTGTGCTTCCTCTTCCGCCTTCGCAGGCACTGTTaGGCATATGTATCGACCCTGTCGTCTCAGGATGGC +
Preference number: 6 (lower is better)
Translates to: ALCFLFRLRRHC*AYVSTLSSQDG
Trigger: GCCATCCTGAGACGACAGGGTCGATACATATGCTCAACAGTGCCTGCGAAGGCGGAAGAGGAAGCACAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339416.7
ENST00000376460.5
ENST00000427887.2
ENST00000442173.5
ENST00000448493.7
ENST00000627024.2
ENST00000630992.2
ENST00000652315.1
ENST00000682017.1
CDS TCA 72 bp TCAGCAGCTGCTGGAAGCACTTCCGGGACACATGACTaGCTCCAGGGAAAAGGGATCAACTGGGAGTGGCTC +
Preference number: 6 (lower is better)
Translates to: SAAAGSTSGTHD*LQGKGINWEWL
Trigger: GAGCCACTCCCAGTTGATCCCTTTTCCCTGGAGTCAGTCATGTGTCCCGGAAGTGCTTCCAGCAGCTGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479769.1
CDS TCA 72 bp TCGGATACTGCATGGCGGCTTCATGAAGGATGCCCTTaGGGACAGATGGGCTCTGCCCACTGCCATTCATCA +
Preference number: 6 (lower is better)
Translates to: SDTAWRLHEGCP*GQMGSAHCHSS
Trigger: TGATGAATGGCAGTGGGCAGAGCCCATCTGTCCTCAAGGGCATCCTTCATGAAGCCGCCATGCAGTATCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339416.7
ENST00000376460.5
ENST00000427887.2
ENST00000442173.5
ENST00000448493.7
ENST00000627024.2
ENST00000630992.2
ENST00000652315.1
ENST00000682017.1
CDS TCA 72 bp CAAGCAGTCACCGGTACTGGAACAGAAGGGAAGCTCTaGGCTGCCGTACTAGAATCCGCTCCTGCTCAACAG +
Preference number: 6 (lower is better)
Translates to: QAVTGTGTEGKL*AAVLESAPAQQ
Trigger: CTGTTGAGCAGGAGCGGATTCTAGTACGGCAGCTCAGAGCTTCCCTTCTGTTCCAGTACCGGTGACTGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448493.7
CDS CAA 72 bp AGCTCTGTGCTTCCTCTTCCGCCTTCGCAGGCACTGTaGAGCATATGTATCGACCCTGTCGTCTCAGGATGG +
Preference number: 6 (lower is better)
Translates to: SSVLPLPPSQAL*SICIDPVVSGW
Trigger: CCATCCTGAGACGACAGGGTCGATACATATGCTCAACAGTGCCTGCGAAGGCGGAAGAGGAAGCACAGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339416.7
ENST00000376460.5
ENST00000427887.2
ENST00000442173.5
ENST00000448493.7
ENST00000627024.2
ENST00000630992.2
ENST00000652315.1
ENST00000682017.1
CDS CAA 72 bp CCTGTCCCGGAGCCAACCGTCCCCCTCACTGTGTTATaGTGTGTAGGAGAACAGGGACATGCATGGACTATC +
Preference number: 6 (lower is better)
Translates to: PVPEPTVPLTVL*CVGEQGHAWTI
Trigger: GATAGTCCATGCATGTCCCTGTTCTCCTACACACAATAACACAGTGAGGGGGACGGTTGGCTCCGGGACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340449.7
CDS TCA 72 bp GCTCTTCCGAAACAGGCTCCCACTGTACCATCTTCGTaGCAAGCAGTCACCGGTACTGGAACAGAAGGGAAG +
Preference number: 6 (lower is better)
Translates to: ALPKQAPTVPSS*QAVTGTGTEGK
Trigger: CTTCCCTTCTGTTCCAGTACCGGTGACTGCTTGTCACGAAGATGGTACAGTGGGAGCCTGTTTCGGAAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000448493.7
CDS TCA 72 bp TGTTCATGTTGCCTTTGTACAGCCAGCCATGCTTGGTaGTCCCACCCTTCTGGGAACCAAGGGAGGCAGCAT +
Preference number: 6 (lower is better)
Translates to: CSCCLCTASHAW*SHPSGNQGRQH
Trigger: ATGCTGCCTCCCTTGGTTCCCAGAAGGGTGGGATCACCAAGCATGGCTGGCTGTACAAAGGCAACATGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339416.7
ENST00000376460.5
ENST00000427887.2
ENST00000442173.5
ENST00000448493.7
ENST00000627024.2
ENST00000630992.2
ENST00000652315.1
ENST00000682017.1
CDS TCA 72 bp AATATTCCCTGCTTCGGATACTGCATGGCGGCTTCATaGAGGATGCCCTTGAGGACAGATGGGCTCTGCCCA +
Preference number: 6 (lower is better)
Translates to: NIPCFGYCMAAS*RMPLRTDGLCP
Trigger: TGGGCAGAGCCCATCTGTCCTCAAGGGCATCCTTCATGAAGCCGCCATGCAGTATCCGAAGCAGGGAATATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339416.7
ENST00000376460.5
ENST00000427887.2
ENST00000442173.5
ENST00000448493.7
ENST00000627024.2
ENST00000630992.2
ENST00000652315.1
ENST00000682017.1
CDS GCA 72 bp ATGGCACTGTTCATGTTGCCTTTGTACAGCCAGCCATaGTTGGTGATCCCACCCTTCTGGGAACCAAGGGAG +
Preference number: 6 (lower is better)
Translates to: MALFMLPLYSQP*LVIPPFWEPRE
Trigger: CTCCCTTGGTTCCCAGAAGGGTGGGATCACCAAGCATGGCTGGCTGTACAAAGGCAACATGAACAGTGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339416.7
ENST00000376460.5
ENST00000427887.2
ENST00000442173.5
ENST00000448493.7
ENST00000627024.2
ENST00000630992.2
ENST00000652315.1
ENST00000682017.1
CDS GCA 72 bp TCCTCCTCTTCAGCACTGCGTATGACACAAGCAGAGTaGCTTCGGAGCAGCTTCTCCCTCTTATCCAGGGAA +
Preference number: 6 (lower is better)
Translates to: SSSSALRMTQAE*LRSSFSLLSRE
Trigger: TTCCCTGGATAAGAGGGAGAAGCTGCTCCGAAGGCACTCTGCTTGTGTCATACGCAGTGCTGAAGAGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638020.1
CDS TCA 72 bp TCCTCCAGGGGGCAGATCATCCCAGCTGCTCATGCATaGTTTCAGAAAGCTCCTTCGCCATTTCCCTGTAGT +
Preference number: 6 (lower is better)
Translates to: SSRGQIIPAAHA*FQKAPSPFPCS
Trigger: ACTACAGGGAAATGGCGAAGGAGCTTTCTGAAATCATGCATGAGCAGCTGGGATGATCTGCCCCCTGGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376460.5
ENST00000652315.1
CDS CCA 72 bp CACTGTACCATCTTCGTGACAAGCAGTCACCGGTACTaGAACAGAAGGGAAGCTCTGAGCTGCCGTACTAGA +
Preference number: 6 (lower is better)
Translates to: HCTIFVTSSHRY*NRREALSCRTR
Trigger: TCTAGTACGGCAGCTCAGAGCTTCCCTTCTGTTCCAGTACCGGTGACTGCTTGTCACGAAGATGGTACAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000448493.7
CDS CAA 90 bp GAGCCACTGGAGAACTTAGTACTTCCGGCAGTGGGAGGGAAGGTGTaGCATTCAATGTCTCCTCTGGCAAAGGTGGAATCATTAGAAGGG +
Preference number: 6 (lower is better)
Translates to: EPLENLVLPAVGGKV*HSMSPLAKVESLEG
Trigger: CCCTTCTAATGATTCCACCTTTGCCAGAGGAGACATTGAATGCAACACCTTCCCTCCCACTGCCGGAAGTACTAAGTTCTCCAGTGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638020.1
CDS TCA 72 bp TCCTCCAGGGGGCAGATCTTCTCACCTGCTCATGCATaGTTTCAGAAAGCTCCTTCGCCATTTCCCTGTAGT +
Preference number: 6 (lower is better)
Translates to: SSRGQIFSPAHA*FQKAPSPFPCS
Trigger: ACTACAGGGAAATGGCGAAGGAGCTTTCTGAAATCATGCATGAGCAGGTGAGAAGATCTGCCCCCTGGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442173.5
CDS CCA 72 bp AAACAGGCAATGTCTGAGACTTTCGATCATGAACTATaGGTCCCAACCCCTCCTGGTTCCCAAGCAGGAAGG +
Preference number: 6 (lower is better)
Translates to: KQAMSETFDHEL*VPTPPGSQAGR
Trigger: CCTTCCTGCTTGGGAACCAGGAGGGGTTGGGACCCATAGTTCATGATCGAAAGTCTCAGACATTGCCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340449.7
ENST00000472874.1
CDS TCA 72 bp GGTGATGGTGTAAAACTGCAGCAAAGGCGCTTCTTGTaGAAACTGGCCCACCAGGTCTGCCATAAATGCACT +
Preference number: 6 (lower is better)
Translates to: GDGVKLQQRRFL*KLAHQVCHKCT
Trigger: AGTGCATTTATGGCAGACCTGGTGGGCCAGTTTTCACAAGAAGCGCCTTTGCTGCAGTTTTACACCATCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339416.7
ENST00000376460.5
ENST00000427887.2
ENST00000442173.5
ENST00000448493.7
ENST00000627024.2
ENST00000652315.1
ENST00000682017.1
CDS TCA 72 bp GCAAAGGTGGAATCATTAGAAGGGAAAAATCCACAGTaGCCCGGTTTTTCCTGGCTGACTGGCAGCTCTCCT +
Preference number: 6 (lower is better)
Translates to: AKVESLEGKNPQ*PGFSWLTGSSP
Trigger: AGGAGAGCTGCCAGTCAGCCAGGAAAAACCGGGTCACTGTGGATTTTTCCCTTCTAATGATTCCACCTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000638020.1
CDS GCA 72 bp TTAAAAGTGAGAGAGTTATCCAGGCTGCCCAGCTGCTaGAATCTGGCATGCATCATTCCTGTTCCAAGCAGG +
Preference number: 6 (lower is better)
Translates to: LKVRELSRLPSC*NLACIIPVPSR
Trigger: CCTGCTTGGAACAGGAATGATGCATGCCAGATTGCAGCAGCTGGGCAGCCTGGATAACTCTCTCACTTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339416.7
CDS CCA 72 bp GCCCAAGCAAATGGCATTCTATACTGTCCTAGTCTTTaGCATGCCTGCTTGGCATTCTTCAGCACCTTCTGG +
Preference number: 6 (lower is better)
Translates to: AQANGILYCPSL*HACLAFFSTFW
Trigger: CCAGAAGGTGCTGAAGAATGCCAAGCAGGCATGCCAAAGACTAGGACAGTATAGAATGCCATTTGCTTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339416.7
ENST00000376460.5
ENST00000427887.2
ENST00000442173.5
ENST00000448493.7
ENST00000627024.2
ENST00000630992.2
ENST00000652315.1
ENST00000682017.1
CDS CAA 72 bp GGCATTCTATACTGTCCTAGTCTTTGGCATGCCTGCTaGGCATTCTTCAGCACCTTCTGGGCCACCTTAGAA +
Preference number: 6 (lower is better)
Translates to: GILYCPSLWHAC*AFFSTFWATLE
Trigger: TTCTAAGGTGGCCCAGAAGGTGCTGAAGAATGCCAAGCAGGCATGCCAAAGACTAGGACAGTATAGAATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339416.7
ENST00000376460.5
ENST00000427887.2
ENST00000442173.5
ENST00000448493.7
ENST00000627024.2
ENST00000630992.2
ENST00000652315.1
ENST00000682017.1
CDS CAA 72 bp ATGTGGCTCTACTGGAAAACTGCCGGCTCCTGTGATTaGCTTGGGATTGTTCTGAATCTCAGAACCTGCCCA +
Preference number: 6 (lower is better)
Translates to: MWLYWKTAGSCD*LGIVLNLRTCP
Trigger: TGGGCAGGTTCTGAGATTCAGAACAATCCCAAGCAAATCACAGGAGCCGGCAGTTTTCCAGTAGAGCCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448493.7
CDS CAA 72 bp GAGAACTTAGTACTTCCGGCAGTGGGAGGGAAGGTGTaGCATTCAATGTCTCCTCTGGCAAAGGTGGAATCA +
Preference number: 6 (lower is better)
Translates to: ENLVLPAVGGKV*HSMSPLAKVES
Trigger: TGATTCCACCTTTGCCAGAGGAGACATTGAATGCAACACCTTCCCTCCCACTGCCGGAAGTACTAAGTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638020.1
CDS GCA 72 bp AATGGCATTCTATACTGTCCTAGTCTTTGGCATGCCTaGTTGGCATTCTTCAGCACCTTCTGGGCCACCTTA +
Preference number: 6 (lower is better)
Translates to: NGILYCPSLWHA*LAFFSTFWATL
Trigger: TAAGGTGGCCCAGAAGGTGCTGAAGAATGCCAAGCAGGCATGCCAAAGACTAGGACAGTATAGAATGCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339416.7
ENST00000376460.5
ENST00000427887.2
ENST00000442173.5
ENST00000448493.7
ENST00000627024.2
ENST00000630992.2
ENST00000652315.1
ENST00000682017.1
CDS GCA 72 bp TTAAAAGTGAGAGAGTTATCCAGGCTGCCCAGCTGCTaGAATCTGGCATGCATCATTCCTGTTCTGTTACGG +
Preference number: 6 (lower is better)
Translates to: LKVRELSRLPSC*NLACIIPVLLR
Trigger: CCGTAACAGAACAGGAATGATGCATGCCAGATTGCAGCAGCTGGGCAGCCTGGATAACTCTCTCACTTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340449.7
ENST00000450257.2
ENST00000682017.1
CDS GCA 72 bp TTAAAAGTGAGAGAGTTATCCAGGCTGCCCAGCTGCTaGAATCTGGCATGCATCATTCCTGTTCTGGCTATG +
Preference number: 6 (lower is better)
Translates to: LKVRELSRLPSC*NLACIIPVLAM
Trigger: CATAGCCAGAACAGGAATGATGCATGCCAGATTGCAGCAGCTGGGCAGCCTGGATAACTCTCTCACTTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000652315.1
CDS CCA 72 bp ACTGTGTTATTGTGTGTAGGAGAACAGGGACATGCATaGACTATCATCGACTGCATGCTGCTGGGTGACTTC +
Preference number: 6 (lower is better)
Translates to: TVLLCVGEQGHA*TIIDCMLLGDF
Trigger: GAAGTCACCCAGCAGCATGCAGTCGATGATAGTCCATGCATGTCCCTGTTCTCCTACACACAATAACACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340449.7
CDS CCA 72 bp AAACAGGCAATGTCTGAGACTTTCGATCATGAACTATaGGTCCCAACCCCTCCTGGTTCCTGGCTATGTATC +
Preference number: 6 (lower is better)
Translates to: KQAMSETFDHEL*VPTPPGSWLCI
Trigger: GATACATAGCCAGGAACCAGGAGGGGTTGGGACCCATAGTTCATGATCGAAAGTCTCAGACATTGCCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450257.2
ENST00000682017.1
CDS CAA 72 bp CCCAGCACAGTGCCTTTCTGTGACAGAATTTACTGTTaGCCCATCTTCATGGGACAAAGTCAGGGAGAATCC +
Preference number: 6 (lower is better)
Translates to: PSTVPFCDRIYC*PIFMGQSQGES
Trigger: GGATTCTCCCTGACTTTGTCCCATGAAGATGGGCAAACAGTAAATTCTGTCACAGAAAGGCACTGTGCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340449.7
CDS CAA 90 bp CAAGCAAATGGCATTCTATACTGTCCTAGTCTTTGGCATGCCTGCTaGGCATTCTTCAGCACCTTCTGGGCCACCTTAGAAGAGTCTGAA +
Preference number: 6 (lower is better)
Translates to: QANGILYCPSLWHAC*AFFSTFWATLEESE
Trigger: TTCAGACTCTTCTAAGGTGGCCCAGAAGGTGCTGAAGAATGCCAAGCAGGCATGCCAAAGACTAGGACAGTATAGAATGCCATTTGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339416.7
ENST00000376460.5
ENST00000427887.2
ENST00000442173.5
ENST00000448493.7
ENST00000627024.2
ENST00000630992.2
ENST00000652315.1
ENST00000682017.1
CDS TCA 72 bp CTACTTGTCCTGCATTTATCAGCCTGCATTCTCGGCTaGAAACGCAAGTCAGAAAGTCTGCAACTGGAACAG +
Preference number: 6 (lower is better)
Translates to: LLVLHLSACILG*KRKSESLQLEQ
Trigger: CTGTTCCAGTTGCAGACTTTCTGACTTGCGTTTTCAGCCGAGAATGCAGGCTGATAAATGCAGGACAAGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000627024.2
ENST00000630992.2
ENST00000682017.1
CDS GCA 72 bp GTAGGAGAACAGGGACATGCATGGACTATCATCGACTaGATGCTGCTGGGTGACTTCAAAGTGACAATAAGA +
Preference number: 6 (lower is better)
Translates to: VGEQGHAWTIID*MLLGDFKVTIR
Trigger: TCTTATTGTCACTTTGAAGTCACCCAGCAGCATGCAGTCGATGATAGTCCATGCATGTCCCTGTTCTCCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340449.7
CDS CCA 72 bp TCCTGGTTCCTGGCTATGTATCGCTTCCCCATGTACTaGAACTGGTGCAGGCAGACTTCAGATATTGTAAAA +
Preference number: 6 (lower is better)
Translates to: SWFLAMYRFPMY*NWCRQTSDIVK
Trigger: TTTTACAATATCTGAAGTCTGCCTGCACCAGTTCCAGTACATGGGGAAGCGATACATAGCCAGGAACCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450257.2
ENST00000682017.1
CDS CAA 72 bp GGTGATTGGTGTAGATGGTGTAAGGCTGAGTGTGTTTaGGTATGCAGGGCACAAATTCCTCCACTTCAAACG +
Preference number: 6 (lower is better)
Translates to: GDWCRWCKAECV*VCRAQIPPLQT
Trigger: CGTTTGAAGTGGAGGAATTTGTGCCCTGCATACCAAAACACACTCAGCCTTACACCATCTACACCAATCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339416.7
ENST00000376460.5
ENST00000427887.2
ENST00000442173.5
ENST00000448493.7
ENST00000473165.1
ENST00000627024.2
ENST00000630992.2
ENST00000652315.1
ENST00000682017.1
CDS TCA 72 bp ACATGCATGGACTATCATCGACTGCATGCTGCTGGGTaGCTTCAAAGTGACAATAAGAAGGCACAGTGTTCA +
Preference number: 6 (lower is better)
Translates to: TCMDYHRLHAAG*LQSDNKKAQCS
Trigger: TGAACACTGTGCCTTCTTATTGTCACTTTGAAGTCACCCAGCAGCATGCAGTCGATGATAGTCCATGCATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340449.7
CDS CCA 72 bp GTGATTGGTGTAGATGGTGTAAGGCTGAGTGTGTTTTaGTATGCAGGGCACAAATTCCTCCACTTCAAACGT +
Preference number: 6 (lower is better)
Translates to: VIGVDGVRLSVF*YAGHKFLHFKR
Trigger: ACGTTTGAAGTGGAGGAATTTGTGCCCTGCATACCAAAACACACTCAGCCTTACACCATCTACACCAATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339416.7
ENST00000376460.5
ENST00000427887.2
ENST00000442173.5
ENST00000448493.7
ENST00000473165.1
ENST00000627024.2
ENST00000630992.2
ENST00000652315.1
ENST00000682017.1
CDS CCA 72 bp ATAAGAAGGCACAGTGTTCATCAAACTCGACCACCGTaGATGGCAAACATGTACAAGGTTCACAGTCTAGTT +
Preference number: 6 (lower is better)
Translates to: IRRHSVHQTRPP*MANMYKVHSLV
Trigger: AACTAGACTGTGAACCTTGTACATGTTTGCCATCCACGGTGGTCGAGTTTGATGAACACTGTGCCTTCTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340449.7
CDS CCA 72 bp ATTCCTGTTCTGGCTATGTATCGCTTCCCCATGTACTaGAACTGGTGCAGGCAGACTTCAGATATTGTAAAA +
Preference number: 6 (lower is better)
Translates to: IPVLAMYRFPMY*NWCRQTSDIVK
Trigger: TTTTACAATATCTGAAGTCTGCCTGCACCAGTTCCAGTACATGGGGAAGCGATACATAGCCAGAACAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376460.5
ENST00000442173.5
ENST00000448493.7
ENST00000652315.1
CDS GCA 72 bp TGTGATCCATTCTTCCATTTCCACTTCACTGTCTGCTaGCAAGAGATAACTACTTTTGTCCTGCATCTTGAG +
Preference number: 6 (lower is better)
Translates to: CDPFFHFHFTVC*QEITTFVLHLE
Trigger: CTCAAGATGCAGGACAAAAGTAGTTATCTCTTGGCAGCAGACAGTGAAGTGGAAATGGAAGAATGGATCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000339416.7
ENST00000376460.5
ENST00000427887.2
ENST00000442173.5
ENST00000448493.7
ENST00000627024.2
ENST00000630992.2
ENST00000652315.1
ENST00000682017.1
CDS CCA 72 bp TTTGTCGACCTCCTCGTCAACTTCATAGACATGAACTaGAAGTTTATCCAACTTGACCACTTTGTTCGGAAG +
Preference number: 6 (lower is better)
Translates to: FVDLLVNFIDMN*KFIQLDHFVRK
Trigger: CTTCCGAACAAAGTGGTCAAGTTGGATAAACTTCCAGTTCATGTCTATGAAGTTGACGAGGAGGTCGACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339416.7
ENST00000376460.5
ENST00000427887.2
ENST00000442173.5
ENST00000448493.7
ENST00000627024.2
ENST00000630992.2
ENST00000652315.1
ENST00000682017.1
CDS CCA 72 bp TTTTGTATAGAGCAGAGCATATCTTTCCACAGTGCATaGAGCAAAGTCACATCATCTCCACTCCTGTTTTCC +
Preference number: 6 (lower is better)
Translates to: FCIEQSISFHSA*SKVTSSPLLFS
Trigger: GGAAAACAGGAGTGGAGATGATGTGACTTTGCTCCATGCACTGTGGAAAGATATGCTCTGCTCTATACAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340449.7
CDS TCA 72 bp CCATCTTCTCAGGTTTCCGAAAGTCTGCAAGTAACTTaGGCATGTCATCATTGGATAGCTTATTGCTGTCTT +
Preference number: 6 (lower is better)
Translates to: PSSQVSESLQVT*ACHHWIAYCCL
Trigger: AAGACAGCAATAAGCTATCCAATGATGACATGCTCAAGTTACTTGCAGACTTTCGGAAACCTGAGAAGATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339416.7
ENST00000376460.5
ENST00000427887.2
ENST00000442173.5
ENST00000448493.7
ENST00000627024.2
ENST00000630992.2
ENST00000652315.1
ENST00000682017.1
CDS TCA 72 bp TTGGTATGCAGGGCACAAATTCCTCCACTTCAAACGTaGTGGGAGTTTTACTGCAGGTTTCAAATTGTTTTG +
Preference number: 6 (lower is better)
Translates to: LVCRAQIPPLQT*WEFYCRFQIVL
Trigger: CAAAACAATTTGAAACCTGCAGTAAAACTCCCATCACGTTTGAAGTGGAGGAATTTGTGCCCTGCATACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339416.7
ENST00000376460.5
ENST00000427887.2
ENST00000442173.5
ENST00000448493.7
ENST00000473165.1
ENST00000627024.2
ENST00000630992.2
ENST00000652315.1
ENST00000682017.1
CDS CCA 72 bp TTTGTTAAACTGGCTATGTATCGCTTCCCCATGTACTaGAACTGGTGCAGGCAGACTTCAGATATTGTAAAA +
Preference number: 6 (lower is better)
Translates to: FVKLAMYRFPMY*NWCRQTSDIVK
Trigger: TTTTACAATATCTGAAGTCTGCCTGCACCAGTTCCAGTACATGGGGAAGCGATACATAGCCAGTTTAACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339416.7
ENST00000472874.1
CDS CAA 72 bp TCGCCATTTCGCTTTTCTTGCATTGCAGCTTCAAAGTaGAGCTGGAGGATCTTATTTAGAATTGTGATCCAT +
Preference number: 6 (lower is better)
Translates to: SPFRFSCIAASK*SWRILFRIVIH
Trigger: ATGGATCACAATTCTAAATAAGATCCTCCAGCTCAACTTTGAAGCTGCAATGCAAGAAAAGCGAAATGGCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000339416.7
ENST00000376460.5
ENST00000427887.2
ENST00000442173.5
ENST00000448493.7
ENST00000627024.2
ENST00000630992.2
ENST00000652315.1
ENST00000682017.1
CDS CAA 72 bp ATCTTTTTCACATGCAGCAGAGAACCATGGCAATTTTaGTATAGAGCAGAGCATATCTTTCCACAGTGCATG +
Preference number: 6 (lower is better)
Translates to: IFFTCSREPWQF*YRAEHIFPQCM
Trigger: CATGCACTGTGGAAAGATATGCTCTGCTCTATACAAAAATTGCCATGGTTCTCTGCTGCATGTGAAAAAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340449.7
CDS CCA 72 bp TTTCGCTTTTCTTGCATTGCAGCTTCAAAGTTGAGCTaGAGGATCTTATTTAGAATTGTGATCCATTCTTCC +
Preference number: 6 (lower is better)
Translates to: FRFSCIAASKLS*RILFRIVIHSS
Trigger: GGAAGAATGGATCACAATTCTAAATAAGATCCTCCAGCTCAACTTTGAAGCTGCAATGCAAGAAAAGCGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000339416.7
ENST00000376460.5
ENST00000427887.2
ENST00000442173.5
ENST00000448493.7
ENST00000627024.2
ENST00000630992.2
ENST00000652315.1
ENST00000682017.1
CDS CAA 72 bp AAGTCTGAGGAAACATTATCAATTGTAATGTCTAGATaGCCTAAAATCACTGGGAGCTTAGCCATCTTCTCA +
Preference number: 6 (lower is better)
Translates to: KSEETLSIVMSR*PKITGSLAIFS
Trigger: TGAGAAGATGGCTAAGCTCCCAGTGATTTTAGGCAATCTAGACATTACAATTGATAATGTTTCCTCAGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000339416.7
ENST00000376460.5
ENST00000427887.2
ENST00000442173.5
ENST00000448493.7
ENST00000627024.2
ENST00000630992.2
ENST00000652315.1
ENST00000682017.1
CDS CAA 72 bp AGTCAAGGTAGAAGACGTTGCTGGTATAAGGACACCTaGTATATACTTGCATTTAGTACTCCAAAACTCAAA +
Preference number: 6 (lower is better)
Translates to: SQGRRRCWYKDT*YILAFSTPKLK
Trigger: TTTGAGTTTTGGAGTACTAAATGCAAGTATATACAAGGTGTCCTTATACCAGCAACGTCTTCTACCTTGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340449.7
CDS TCA 72 bp AAATCTTCAGCTTCTCACATTCACTGTTTTAAGCTGTaGGGCATTTTATTCTACTTGGCACAATATTCTCCA +
Preference number: 6 (lower is better)
Translates to: KSSASHIHCFKL*GILFYLAQYSP
Trigger: TGGAGAATATTGTGCCAAGTAGAATAAAATGCCTCACAGCTTAAAACAGTGAATGTGAGAAGCTGAAGATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340449.7