RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DOCK7 (Homo sapiens)

Ensembl gene IDs: ENSG00000116641

Ensembl transcript IDs: ENST00000251157.10, ENST00000340370.10, ENST00000404627.3, ENST00000454575.6, ENST00000467758.1, ENST00000489185.1, ENST00000614472.5, ENST00000634223.1, ENST00000634264.1, ENST00000634495.2, ENST00000635088.1, ENST00000635123.1, ENST00000635253.2, ENST00000635348.1, ENST00000635827.1, ENST00000635983.1, ENST00000637208.1, ENST00000637255.1, ENST00000637487.1

Found 716 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCAGAGCTCAGGCGATAATGCTAGCTCAGCTGCTGCTCACCTACTaGTCTACGGCCCGGATCCTAACAGGCAGGACAGGTACCTGTCCG +
Preference number: 1 (lower is better)
Translates to: GRAQAIMLAQLLLTY*STARILTGRTGTCP
Trigger: CGGACAGGTACCTGTCCTGCCTGTTAGGATCCGGGCCGTAGAGCAGTAGGTGAGCAGCAGCTGAGCTAGCATTATCGCCTGAGCTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635827.1
3UTR GCA 90 bp GATGGGCTTCTCTCGAGCTGTCCTCGGCTTCGCCGTACCATTTCTTaGCTGGCACCTATGCTCCCAAGAATAGCTTCTTCAAGCTTTGCT +
Preference number: 1 (lower is better)
Translates to: DGLLSSCPRLRRTIS*LAPMLPRIASSSFA
Trigger: AGCAAAGCTTGAAGAAGCTATTCTTGGGAGCATAGGTGCCAGGCAAGAAATGGTACGGCGAAGCCGAGGACAGCTCGAGAGAAGCCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR CCA 90 bp TGCCAGGCCTTGTTAGTTGAGGGACCGATGTCCCTGCGATTGCCATaGCAACGGTCTGGCTTATCATACTTCCGCTCTCACTTTCATAAT +
Preference number: 1 (lower is better)
Translates to: CQALLVEGPMSLRLP*QRSGLSYFRSHFHN
Trigger: ATTATGAAAGTGAGAGCGGAAGTATGATAAGCCAGACCGTTGCCATGGCAATCGCAGGGACATCGGTCCCTCAACTAACAAGGCCTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR CCA 90 bp TACCTGTCCGCCACCTGGGGATTAGGAACCCCTGCAGTAAAGCACTaGCATACAGATCAGTGGAATGGGATGGAGAGTCCAGAAATAAAT +
Preference number: 1 (lower is better)
Translates to: YLSATWGLGTPAVKH*HTDQWNGMESPEIN
Trigger: ATTTATTTCTGGACTCTCCATCCCATTCCACTGATCTGTATGCCAGTGCTTTACTGCAGGGGTTCCTAATCCCCAGGTGGCGGACAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635827.1
3UTR CCA 90 bp TCCCAATCTCAAAGTTTTGCCTCATTAGTAGGTAAAGGGAGGCACTaGCGTGTGACCGTATTGTACCGATGCTACTGCTACAGTGTCGGA +
Preference number: 1 (lower is better)
Translates to: SQSQSFASLVGKGRH*RVTVLYRCYCYSVG
Trigger: TCCGACACTGTAGCAGTAGCATCGGTACAATACGGTCACACGCCAGTGCCTCCCTTTACCTACTAATGAGGCAAAACTTTGAGATTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR TCA 90 bp AACCTCAGGAGACAGTACAGAATAAGCCTGTGGTGGTTTTTCCAATaGGACTGGCAAGCAAAACTGGCCAGTCTTCAACCGTCCATTCTG +
Preference number: 1 (lower is better)
Translates to: NLRRQYRISLWWFFQ*DWQAKLASLQPSIL
Trigger: CAGAATGGACGGTTGAAGACTGGCCAGTTTTGCTTGCCAGTCTCATTGGAAAAACCACCACAGGCTTATTCTGTACTGTCTCCTGAGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000634223.1
ENST00000637208.1
3UTR TCA 90 bp GTGACCGTATTGTACCGATGCTACTGCTACAGTGTCGGAGAAGCCTaGGGCATAAATCAGCACACTGCTCTGTCTCTTCTTCAAATAAGA +
Preference number: 1 (lower is better)
Translates to: VTVLYRCYCYSVGEA*GINQHTALSLLQIR
Trigger: TCTTATTTGAAGAAGAGACAGAGCAGTGTGCTGATTTATGCCTCAGGCTTCTCCGACACTGTAGCAGTAGCATCGGTACAATACGGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR GCA 90 bp TACAGGCCATGCTGTGTAGTAGCACTTTTAGCACTCCACCAAGAATaGTCTCTTTGGATTCCGTTACAGAAACGGTCTGAACAACAATCT +
Preference number: 1 (lower is better)
Translates to: YRPCCVVALLALHQE*SLWIPLQKRSEQQS
Trigger: AGATTGTTGTTCAGACCGTTTCTGTAACGGAATCCAAAGAGAGCATTCTTGGTGGAGTGCTAAAAGTGCTACTACACAGCATGGCCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR GCA 90 bp CTACTGCTACAGTGTCGGAGAAGCCTGAGGCATAAATCAGCACACTaGTCTGTCTCTTCTTCAAATAAGAGTTCAGGAAACTTTGAAACC +
Preference number: 1 (lower is better)
Translates to: LLLQCRRSLRHKSAH*SVSSSNKSSGNFET
Trigger: GGTTTCAAAGTTTCCTGAACTCTTATTTGAAGAAGAGACAGAGCAGTGTGCTGATTTATGCCTCAGGCTTCTCCGACACTGTAGCAGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR CCA 90 bp TGCTGTGTAGTAGCACTTTTAGCACTCCACCAAGAATGCTCTCTTTaGATTCCGTTACAGAAACGGTCTGAACAACAATCTCTAATGTAT +
Preference number: 1 (lower is better)
Translates to: CCVVALLALHQECSL*IPLQKRSEQQSLMY
Trigger: ATACATTAGAGATTGTTGTTCAGACCGTTTCTGTAACGGAATCCAAAGAGAGCATTCTTGGTGGAGTGCTAAAAGTGCTACTACACAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR GCA 90 bp GTAGGCGGAAAACATAATGAATATATGATGCAAGAAGGCTGTTTCTaGCATGCTGGTCATGATTTCCTTCCAAGTTTTTGTGAAGTCGAT +
Preference number: 1 (lower is better)
Translates to: VGGKHNEYMMQEGCF*HAGHDFLPSFCEVD
Trigger: ATCGACTTCACAAAAACTTGGAAGGAAATCATGACCAGCATGGCAGAAACAGCCTTCTTGCATCATATATTCATTATGTTTTCCGCCTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR GCA 90 bp AACAAATCCTCTGTCCATAACAGACAACAGATCATTGAGAAAGAATaGAAGGCTTGTATTGAGTCTCTCAACCATTTCTGTGTCCTTCTG +
Preference number: 1 (lower is better)
Translates to: NKSSVHNRQQIIEKE*KACIESLNHFCVLL
Trigger: CAGAAGGACACAGAAATGGTTGAGAGACTCAATACAAGCCTTGCATTCTTTCTCAATGATCTGTTGTCTGTTATGGACAGAGGATTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR CCA 90 bp GAATCTCTTTCCAAACTCCCAGCACTGCTAACAATATTCATTAAATaGATTGCAGTCCAAGCAAAAGGCATGCGATATTTCCCAAGTCTT +
Preference number: 1 (lower is better)
Translates to: ESLSKLPALLTIFIK*IAVQAKGMRYFPSL
Trigger: AAGACTTGGGAAATATCGCATGCCTTTTGCTTGGACTGCAATCCATTTAATGAATATTGTTAGCAGTGCTGGGAGTTTGGAAAGAGATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614472.5
3UTR CCA 90 bp CATACTTCCGCTCTCACTTTCATAATCATCAGTGGCTATACAAATTaGTCTTCCTCGTTGATTGTGAGTTTCTGTAAAATCATACAGCTG +
Preference number: 1 (lower is better)
Translates to: HTSALTFIIISGYTN*SSSLIVSFCKIIQL
Trigger: CAGCTGTATGATTTTACAGAAACTCACAATCAACGAGGAAGACCAATTTGTATAGCCACTGATGATTATGAAAGTGAGAGCGGAAGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR TCA 90 bp GCCTTTCTACAATGCACAGATTATCCTTACTGGACTTCAATCCAGTaGAAGATCTACCAGAATACTAGAAAATTAGCTAGGAAACATTGC +
Preference number: 1 (lower is better)
Translates to: AFLQCTDYPYWTSIQ*KIYQNTRKLARKHC
Trigger: GCAATGTTTCCTAGCTAATTTTCTAGTATTCTGGTAGATCTTTCACTGGATTGAAGTCCAGTAAGGATAATCTGTGCATTGTAGAAAGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR CAA 90 bp GGAAACTGCCAGGCCTTGTTAGTTGAGGGACCGATGTCCCTGCGATaGCCATGGCAACGGTCTGGCTTATCATACTTCCGCTCTCACTTT +
Preference number: 2 (lower is better)
Translates to: GNCQALLVEGPMSLR*PWQRSGLSYFRSHF
Trigger: AAAGTGAGAGCGGAAGTATGATAAGCCAGACCGTTGCCATGGCAATCGCAGGGACATCGGTCCCTCAACTAACAAGGCCTGGCAGTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR CAA 90 bp AGATGGGCTTCTCTCGAGCTGTCCTCGGCTTCGCCGTACCATTTCTaGCCTGGCACCTATGCTCCCAAGAATAGCTTCTTCAAGCTTTGC +
Preference number: 2 (lower is better)
Translates to: RWASLELSSASPYHF*PGTYAPKNSFFKLC
Trigger: GCAAAGCTTGAAGAAGCTATTCTTGGGAGCATAGGTGCCAGGCAAGAAATGGTACGGCGAAGCCGAGGACAGCTCGAGAGAAGCCCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR-3UTR CCA 90 bp CTCTACGGCCCGGATCCTAACAGGCAGGACAGGTACCTGTCCGCCACCTGGGGAATACATGCTACGACATaGATGAACCTGAAAAACATT +
Preference number: 2 (lower is better)
Translates to: LYGPDPNRQDRYLSATWGIHATT*MNLKNI
Trigger: AATGTTTTTCAGGTTCATCCATGTCGTAGCATGTAT...TCCCCAGGTGGCGGACAGGTACCTGTCCTGCCTGTTAGGATCCGGGCCGTAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635827.1
3UTR-3UTR CCA 90 bp GCAAAGCTGATTCCCGAACGCTGCCACTGCAAACAACCCACTGCAAAGCCAGCTCATCATCTGGTGACGTaGGAGTCCCAGATATATCTG +
Preference number: 2 (lower is better)
Translates to: AKLIPERCHCKQPTAKPAHHLVT*ESQIYL
Trigger: CAGATATATCTGGGACTCCCACGTCACCAGATGATG...AGCTGGCTTTGCAGTGGGTTGTTTGCAGTGGCAGCGTTCGGGAATCAGCTTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR-3UTR TCA 90 bp GTAGATAAACTGCACTTTGGTTACAGGCCATGCTGTGTAGTAGCACTTTTAGCATGCCACTCGTTGACGTaGGGAGGAAACTGCCAGGCC +
Preference number: 2 (lower is better)
Translates to: VDKLHFGYRPCCVVALLACHSLT*GGNCQA
Trigger: GGCCTGGCAGTTTCCTCCTCACGTCAACGAGTGGCA...TGCTAAAAGTGCTACTACACAGCATGGCCTGTAACCAAAGTGCAGTTTATCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR-3UTR TCA 90 bp ATGTCCCTGCGATTGCCATGGCAACGGTCTGGCTTATCATACTTCCGCTCTCACAACCCTTACTCCCGATaGTTGATCGAACTTCATCAT +
Preference number: 2 (lower is better)
Translates to: MSLRLPWQRSGLSYFRSHNPYSR*LIELHH
Trigger: ATGATGAAGTTCGATCAATCATCGGGAGTAAGGGTT...GTGAGAGCGGAAGTATGATAAGCCAGACCGTTGCCATGGCAATCGCAGGGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR-3UTR GCA 90 bp AGACAGATCAAAAGGCTTCGACTTGATTCTGCTGAAAAGGTAGTGTGTTGCCTGCCCGAACGCTGCCACTaGAAACAACCCACTGCAAAG +
Preference number: 2 (lower is better)
Translates to: RQIKRLRLDSAEKVVCCLPERCH*KQPTAK
Trigger: CTTTGCAGTGGGTTGTTTGCAGTGGCAGCGTTCGGG...CAGGCAACACACTACCTTTTCAGCAGAATCAAGTCGAAGCCTTTTGATCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR-3UTR GCA 90 bp TATTTTCCAGAGCAGATACCTTCTTCATCTGGAGATACCACATCATCTGAGACCCGATGTCCCTGCGATTaGCATGGCAACGGTCTGGCT +
Preference number: 2 (lower is better)
Translates to: YFPEQIPSSSGDTTSSETRCPCD*HGNGLA
Trigger: AGCCAGACCGTTGCCATGGCAATCGCAGGGACATCG...GGTCTCAGATGATGTGGTATCTCCAGATGAAGAAGGTATCTGCTCTGGAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR-3UTR CCA 90 bp GTATCAGTTTATCTAGCAGAAGATGAAGAAATCGGACCACTGGTTCCAGCTGGGGTCCCCAATTCGGACTaGGAACAGGTGTTCATCCAG +
Preference number: 2 (lower is better)
Translates to: VSVYLAEDEEIGPLVPAGVPNSD*EQVFIQ
Trigger: CTGGATGAACACCTGTTCCCAGTCCGAATTGGGGAC...CCCAGCTGGAACCAGTGGTCCGATTTCTTCATCTTCTGCTAGATAAACTGATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000634223.1
ENST00000637208.1
3UTR-3UTR TCA 90 bp TATTTTCCAGAGCAGATACCTTCTTCATCTGGAGATACCACATCATCTGAGACCGGCTTGTTGCAAAGCTaGTTCCCGAACGCTGCCACT +
Preference number: 2 (lower is better)
Translates to: YFPEQIPSSSGDTTSSETGLLQS*FPNAAT
Trigger: AGTGGCAGCGTTCGGGAATCAGCTTTGCAACAAGCC...GGTCTCAGATGATGTGGTATCTCCAGATGAAGAAGGTATCTGCTCTGGAAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR-3UTR CCA 90 bp GGTGCAGCTGGGGCTCGGCATGGCATTGCTTGGATCCTCTCCATACATAAACTGTCTGTAAGTAGTGTTTaGAACATAAACATCCCTTGC +
Preference number: 2 (lower is better)
Translates to: GAAGARHGIAWILSIHKLSVSSV*NINIPC
Trigger: GCAAGGGATGTTTATGTTCCAAACACTACTTACAGA...CAGTTTATGTATGGAGAGGATCCAAGCAATGCCATGCCGAGCCCCAGCTGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614472.5
3UTR-3UTR CCA 90 bp GTATCAGTTTATCTAGCAGAAGATGAAGAAATCGGACCACTGGTTCCAGCTGGGACTGGCAAGCAAAACTaGCCAGTCTTCAACCGTCCA +
Preference number: 2 (lower is better)
Translates to: VSVYLAEDEEIGPLVPAGTGKQN*PVFNRP
Trigger: TGGACGGTTGAAGACTGGCCAGTTTTGCTTGCCAGT...CCCAGCTGGAACCAGTGGTCCGATTTCTTCATCTTCTGCTAGATAAACTGATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634223.1
ENST00000637208.1
3UTR-3UTR CCA 90 bp CAATCTCTGCTCTTGATTTGTCAAGCTTCTCTGTGTTTTGACGCCAGTGAGTCATCCCTGCGATTGCCATaGCAACGGTCTGGCTTATCA +
Preference number: 2 (lower is better)
Translates to: QSLLLICQASLCFDASESSLRLP*QRSGLS
Trigger: TGATAAGCCAGACCGTTGCCATGGCAATCGCAGGGA...TGACTCACTGGCGTCAAAACACAGAGAAGCTTGACAAATCAAGAGCAGAGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR-3UTR GCA 90 bp GAATTCCTCCTCTCTGACCAAGACCCTTTTCGTTCTCCAGTACTGATTTCTACTGTAAGACATCGTCCCTaGCCTCAAGGAGCTCACAAT +
Preference number: 2 (lower is better)
Translates to: EFLLSDQDPFRSPVLISTVRHRP*PQGAHN
Trigger: ATTGTGAGCTCCTTGAGGGCAGGGACGATGTCTTAC...AGTAGAAATCAGTACTGGAGAACGAAAAGGGTCTTGGTCAGAGAGGAGGAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614472.5
3UTR-3UTR TCA 90 bp GTATCAGTTTATCTAGCAGAAGATGAAGAAATCGGACCACTGGTTCCAGCTGGGTGGTGGTTTTTCCAATaGGACTGGCAAGCAAAACTG +
Preference number: 2 (lower is better)
Translates to: VSVYLAEDEEIGPLVPAGWWFFQ*DWQAKL
Trigger: CAGTTTTGCTTGCCAGTCTCATTGGAAAAACCACCA...CCCAGCTGGAACCAGTGGTCCGATTTCTTCATCTTCTGCTAGATAAACTGATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000634223.1
ENST00000637208.1
3UTR-3UTR TCA 90 bp TTAGGAACCCCTGCAGTAAAGCACTGGCATACAGATCAGTGGAATGGGATGGAGTACCATCAAGAAAAGTaGACTCACAGACTAGGAGAA +
Preference number: 2 (lower is better)
Translates to: LGTPAVKHWHTDQWNGMEYHQEK*THRLGE
Trigger: TTCTCCTAGTCTGTGAGTTCACTTTTCTTGATGGTA...CTCCATCCCATTCCACTGATCTGTATGCCAGTGCTTTACTGCAGGGGTTCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635827.1
3UTR-3UTR GCA 90 bp TTAGGAACCCCTGCAGTAAAGCACTGGCATACAGATCAGTGGAATGGGATGGAGGAGTACCACTTCACTTaGACTAGAATGACTACAATC +
Preference number: 2 (lower is better)
Translates to: LGTPAVKHWHTDQWNGMEEYHFT*TRMTTI
Trigger: GATTGTAGTCATTCTAGTGCAAGTGAAGTGGTACTC...CTCCATCCCATTCCACTGATCTGTATGCCAGTGCTTTACTGCAGGGGTTCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635827.1
3UTR-3UTR GCA 90 bp CAATCTCTGCTCTTGATTTGTCAAGCTTCTCTGTGTTTTGACGCCAGTGAGTCAAAGAACCAGGCTTGTTaGAAAGCTGATTCCCGAACG +
Preference number: 2 (lower is better)
Translates to: QSLLLICQASLCFDASESKNQAC*KADSRT
Trigger: CGTTCGGGAATCAGCTTTGCAACAAGCCTGGTTCTT...TGACTCACTGGCGTCAAAACACAGAGAAGCTTGACAAATCAAGAGCAGAGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR-3UTR CCA 90 bp TTCAATGTCAGCCCTATCAAAATCCCAGATGCCTTTGTGCACAAACTGACAGCTAAGGTGCAGCCAAATTaGAAAACAGTGTGGCAGTCC +
Preference number: 2 (lower is better)
Translates to: FNVSPIKIPDAFVHKLTAKVQPN*KTVWQS
Trigger: GGACTGCCACACTGTTTTCCAATTTGGCTGCACCTT...AGCTGTCAGTTTGTGCACAAAGGCATCTGGGATTTTGATAGGGCTGACATTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635827.1
3UTR-3UTR CCA 90 bp CTTGACGTCTCTGTGTGCGAAGACATACGATTACAACTTCGATCCATAGCCTGTCCTAGGTTAACTATTTaGCCAGCAATGACAGGAGGT +
Preference number: 2 (lower is better)
Translates to: LDVSVCEDIRLQLRSIACPRLTI*PAMTGG
Trigger: ACCTCCTGTCATTGCTGGCCAAATAGTTAACCTAGG...ACAGGCTATGGATCGAAGTTGTAATCGTATGTCTTCGCACACAGAGACGTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR-3UTR TCA 90 bp CTTGACGTCTCTGTGTGCGAAGACATACGATTACAACTTCGATCCATAGCCTGTTTCAACCGTCCATTCTaGAGCATTGGTATCCATGTA +
Preference number: 2 (lower is better)
Translates to: LDVSVCEDIRLQLRSIACFNRPF*SIGIHV
Trigger: TACATGGATACCAATGCTTCAGAATGGACGGTTGAA...ACAGGCTATGGATCGAAGTTGTAATCGTATGTCTTCGCACACAGAGACGTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR-3UTR TCA 90 bp TTAGGAACCCCTGCAGTAAAGCACTGGCATACAGATCAGTGGAATGGGATGGAGAAACATTATGGCAAGTaGAAGAAGCTAGCCACAAAA +
Preference number: 2 (lower is better)
Translates to: LGTPAVKHWHTDQWNGMEKHYGK*KKLATK
Trigger: TTTTGTGGCTAGCTTCTTTCACTTGCCATAATGTTT...CTCCATCCCATTCCACTGATCTGTATGCCAGTGCTTTACTGCAGGGGTTCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635827.1
3UTR-3UTR TCA 90 bp TATTTTCCAGAGCAGATACCTTCTTCATCTGGAGATACCACATCATCTGAGACCCTGCAATGTCATCCATaGAACGTTCTGGAAAACGAC +
Preference number: 2 (lower is better)
Translates to: YFPEQIPSSSGDTTSSETLQCHP*NVLEND
Trigger: GTCGTTTTCCAGAACGTTTCATGGATGACATTGCAG...GGTCTCAGATGATGTGGTATCTCCAGATGAAGAAGGTATCTGCTCTGGAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR-3UTR GCA 90 bp CTAGATCCCCTGCATGTGCAGCTCACAATAGGGTTCATGCTCCTACCAGAATCTAATAATACCAATACATaGTACGACATGGATGAACCT +
Preference number: 2 (lower is better)
Translates to: LDPLHVQLTIGFMLLPESNNTNT*YDMDEP
Trigger: AGGTTCATCCATGTCGTAGCATGTATTGGTATTATT...AGATTCTGGTAGGAGCATGAACCCTATTGTGAGCTGCACATGCAGGGGATCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635827.1
3UTR-3UTR CCA 90 bp ATTTCATGCCAGGTAGAGGAACCTCAGGAGACAGTACAGAATAAGCCTGTGGTGCCATGTATATCCAACTaGTGTTTCAAGAGGAGTATT +
Preference number: 2 (lower is better)
Translates to: ISCQVEEPQETVQNKPVVPCISN*CFKRSI
Trigger: AATACTCCTCTTGAAACACCAGTTGGATATACATGG...CACCACAGGCTTATTCTGTACTGTCTCCTGAGGTTCCTCTACCTGGCATGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634223.1
ENST00000637208.1
3UTR CAA 90 bp CGAACTTCATCATCTGGTGACGTGGGAGTCCCAGATATATCTGGATaGCTATTACTAAGGCTTCGAGAACGATTTAAATTAAGGCTTGCA +
Preference number: 2 (lower is better)
Translates to: RTSSSGDVGVPDISG*LLLRLRERFKLRLA
Trigger: TGCAAGCCTTAATTTAAATCGTTCTCGAAGCCTTAGTAATAGCAATCCAGATATATCTGGGACTCCCACGTCACCAGATGATGAAGTTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR-3UTR GCA 90 bp GAATTCCTCCTCTCTGACCAAGACCCTTTTCGTTCTCCAGTACTGATTTCTACTTTGGCAAAACTGATCTaGTTGACTCTTCAGTTTCTC +
Preference number: 2 (lower is better)
Translates to: EFLLSDQDPFRSPVLISTLAKLI*LTLQFL
Trigger: GAGAAACTGAAGAGTCAAGCAGATCAGTTTTGCCAA...AGTAGAAATCAGTACTGGAGAACGAAAAGGGTCTTGGTCAGAGAGGAGGAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614472.5
3UTR-3UTR GCA 90 bp TATTTTCCAGAGCAGATACCTTCTTCATCTGGAGATACCACATCATCTGAGACCAATAGCCGGTTTAGCTaGAAGACTGAGAGATCTGTA +
Preference number: 2 (lower is better)
Translates to: YFPEQIPSSSGDTTSSETNSRFS*KTERSV
Trigger: TACAGATCTCTCAGTCTTGCAGCTAAACCGGCTATT...GGTCTCAGATGATGTGGTATCTCCAGATGAAGAAGGTATCTGCTCTGGAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR-3UTR CCA 90 bp TTCAATGTCAGCCCTATCAAAATCCCAGATGCCTTTGTGCACAAACTGACAGCTAAAGGTAAAGTAATTTaGTATAGCAGCGGTCCCCAA +
Preference number: 2 (lower is better)
Translates to: FNVSPIKIPDAFVHKLTAKGKVI*YSSGPQ
Trigger: TTGGGGACCGCTGCTATACCAAATTACTTTACCTTT...AGCTGTCAGTTTGTGCACAAAGGCATCTGGGATTTTGATAGGGCTGACATTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635827.1
3UTR-3UTR TCA 90 bp GTAGATAAACTGCACTTTGGTTACAGGCCATGCTGTGTAGTAGCACTTTTAGCACTAAGTTATTTTCCATaGTTCGCATGTCCCCAATTC +
Preference number: 2 (lower is better)
Translates to: VDKLHFGYRPCCVVALLALSYFP*FACPQF
Trigger: GAATTGGGGACATGCGAATCATGGAAAATAACTTAG...TGCTAAAAGTGCTACTACACAGCATGGCCTGTAACCAAAGTGCAGTTTATCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR-3UTR TCA 90 bp CATATTTGCAATCTTTTGGTCTTGTACATTCGTAGAAAATCCAGAACTCTGAGAATCCATAGCCTGTGTTaGTTCTGCACTTGGACTGGG +
Preference number: 2 (lower is better)
Translates to: HICNLLVLYIRRKSRTLRIHSLC*FCTWTG
Trigger: CCCAGTCCAAGTGCAGAATCAACACAGGCTATGGAT...TCTCAGAGTTCTGGATTTTCTACGAATGTACAAGACCAAAAGATTGCAAATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR-3UTR TCA 90 bp CAATCTCTGCTCTTGATTTGTCAAGCTTCTCTGTGTTTTGACGCCAGTGAGTCATGCTCTCATGTCTTTTaGTTTCTTAAAGGTCAAGCT +
Preference number: 2 (lower is better)
Translates to: QSLLLICQASLCFDASESCSHVF*FLKGQA
Trigger: AGCTTGACCTTTAAGAAATCAAAAGACATGAGAGCA...TGACTCACTGGCGTCAAAACACAGAGAAGCTTGACAAATCAAGAGCAGAGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR-3UTR TCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCTTTCACACTCGATGTTaGATACATGGCTCTTTGCAG +
Preference number: 2 (lower is better)
Translates to: GLSMIFILLGLELVLESTFHTRC*IHGSLQ
Trigger: CTGCAAAGAGCCATGTATTCAACATCGAGTGTGAAA...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
3UTR-3UTR TCA 90 bp GTAGATAAACTGCACTTTGGTTACAGGCCATGCTGTGTAGTAGCACTTTTAGCAGTAAAATCATACAGCTaGGGTACAGTTTCCATGATA +
Preference number: 2 (lower is better)
Translates to: VDKLHFGYRPCCVVALLAVKSYS*GTVSMI
Trigger: TATCATGGAAACTGTACCTCAGCTGTATGATTTTAC...TGCTAAAAGTGCTACTACACAGCATGGCCTGTAACCAAAGTGCAGTTTATCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR-3UTR GCA 90 bp AGACAGATCAAAAGGCTTCGACTTGATTCTGCTGAAAAGGTAGTGTGTTGCCTGATCATTGAGAAAGAATaGAAGGCTTGTATTGAGTCT +
Preference number: 2 (lower is better)
Translates to: RQIKRLRLDSAEKVVCCLIIEKE*KACIES
Trigger: AGACTCAATACAAGCCTTGCATTCTTTCTCAATGAT...CAGGCAACACACTACCTTTTCAGCAGAATCAAGTCGAAGCCTTTTGATCTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR-3UTR CCA 90 bp ATCTTGAAACAGGATAAAAGCTGGAAGACCCACTCTTCTCAATTTCAAAACTTATGGCATACAGATCAGTaGAATGGGATGGAGAGTCCA +
Preference number: 2 (lower is better)
Translates to: ILKQDKSWKTHSSQFQNLWHTDQ*NGMESP
Trigger: TGGACTCTCCATCCCATTCCACTGATCTGTATGCCA...TAAGTTTTGAAATTGAGAAGAGTGGGTCTTCCAGCTTTTATCCTGTTTCAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635827.1
3UTR-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTTTTCACACTCGATGTTaGATACATGGCTCTTTGCAG +
Preference number: 2 (lower is better)
Translates to: LSMIFILLGLELVLESTLFHTRC*IHGSLQ
Trigger: CTGCAAAGAGCCATGTATTCAACATCGAGTGTGAAA...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
3UTR CAA 90 bp ATAAGGCTAAAAACAAATCCTCTGTCCATAACAGACAACAGATCATaGAGAAAGAATGCAAGGCTTGTATTGAGTCTCTCAACCATTTCT +
Preference number: 2 (lower is better)
Translates to: IRLKTNPLSITDNRS*RKNARLVLSLSTIS
Trigger: AGAAATGGTTGAGAGACTCAATACAAGCCTTGCATTCTTTCTCAATGATCTGTTGTCTGTTATGGACAGAGGATTTGTTTTTAGCCTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR-3UTR TCA 90 bp ATCTTGAAACAGGATAAAAGCTGGAAGACCCACTCTTCTCAATTTCAAAACTTACCAATACACACAAAATaGTGCTTAATATCGCTAGCT +
Preference number: 2 (lower is better)
Translates to: ILKQDKSWKTHSSQFQNLPIHTK*CLISLA
Trigger: AGCTAGCGATATTAAGCATCATTTTGTGTGTATTGG...TAAGTTTTGAAATTGAGAAGAGTGGGTCTTCCAGCTTTTATCCTGTTTCAAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635827.1
3UTR GCA 72 bp CAGGCGATAATGCTAGCTCAGCTGCTGCTCACCTACTaGTCTACGGCCCGGATCCTAACAGGCAGGACAGGT +
Preference number: 3 (lower is better)
Translates to: QAIMLAQLLLTY*STARILTGRTG
Trigger: ACCTGTCCTGCCTGTTAGGATCCGGGCCGTAGAGCAGTAGGTGAGCAGCAGCTGAGCTAGCATTATCGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635827.1
3UTR GCA 72 bp CCCAGGCTGGAGCATAGTAGCATGGTCTCAGCGCACTaGAAACTCTACCTTCCCGGCTCAAGCAATCCTCCC +
Preference number: 3 (lower is better)
Translates to: PRLEHSSMVSAH*KLYLPGSSNPP
Trigger: GGGAGGATTGCTTGAGCCGGGAAGGTAGAGTTTGCAGTGCGCTGAGACCATGCTACTATGCTCCAGCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR CCA 72 bp CACCAAAGAGGGAGAGGTCTAACTGTCGGTATAGGATaGGTGCAGCTGGGGCTCGGCATGGCATTGCTTGGA +
Preference number: 3 (lower is better)
Translates to: HQRGRGLTVGIG*VQLGLGMALLG
Trigger: TCCAAGCAATGCCATGCCGAGCCCCAGCTGCACCCATCCTATACCGACAGTTAGACCTCTCCCTCTTTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614472.5
3UTR CCA 72 bp GTCTCGTTTTGTTGCCCAGGCTGGAGCATAGTAGCATaGTCTCAGCGCACTGCAAACTCTACCTTCCCGGCT +
Preference number: 3 (lower is better)
Translates to: VSFCCPGWSIVA*SQRTANSTFPA
Trigger: AGCCGGGAAGGTAGAGTTTGCAGTGCGCTGAGACCATGCTACTATGCTCCAGCCTGGGCAACAAAACGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR GCA 72 bp CTCTCGAGCTGTCCTCGGCTTCGCCGTACCATTTCTTaGCTGGCACCTATGCTCCCAAGAATAGCTTCTTCA +
Preference number: 3 (lower is better)
Translates to: LSSCPRLRRTIS*LAPMLPRIASS
Trigger: TGAAGAAGCTATTCTTGGGAGCATAGGTGCCAGGCAAGAAATGGTACGGCGAAGCCGAGGACAGCTCGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR CCA 72 bp GCCACCTGGGGATTAGGAACCCCTGCAGTAAAGCACTaGCATACAGATCAGTGGAATGGGATGGAGAGTCCA +
Preference number: 3 (lower is better)
Translates to: ATWGLGTPAVKH*HTDQWNGMESP
Trigger: TGGACTCTCCATCCCATTCCACTGATCTGTATGCCAGTGCTTTACTGCAGGGGTTCCTAATCCCCAGGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635827.1
3UTR CCA 72 bp TTGTTAGTTGAGGGACCGATGTCCCTGCGATTGCCATaGCAACGGTCTGGCTTATCATACTTCCGCTCTCAC +
Preference number: 3 (lower is better)
Translates to: LLVEGPMSLRLP*QRSGLSYFRSH
Trigger: GTGAGAGCGGAAGTATGATAAGCCAGACCGTTGCCATGGCAATCGCAGGGACATCGGTCCCTCAACTAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR-3UTR CAA 90 bp AACTGTCGGTATAGGATGGGTGCAGCTGGGGCTCGGCATGGCATTGCTTGGATCAAGCATCATCTCCACTaGTTGTCCTTTCAAGTGATC +
Preference number: 3 (lower is better)
Translates to: NCRYRMGAAGARHGIAWIKHHLH*LSFQVI
Trigger: GATCACTTGAAAGGACAACAAGTGGAGATGATGCTT...GATCCAAGCAATGCCATGCCGAGCCCCAGCTGCACCCATCCTATACCGACAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614472.5
3UTR-3UTR CAA 90 bp AACTGTCGGTATAGGATGGGTGCAGCTGGGGCTCGGCATGGCATTGCTTGGATCGAACATAAACATCCCTaGCGGGAAACTCTAAGATTT +
Preference number: 3 (lower is better)
Translates to: NCRYRMGAAGARHGIAWIEHKHP*RETLRF
Trigger: AAATCTTAGAGTTTCCCGCAAGGGATGTTTATGTTC...GATCCAAGCAATGCCATGCCGAGCCCCAGCTGCACCCATCCTATACCGACAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614472.5
3UTR TCA 72 bp TTGTACCGATGCTACTGCTACAGTGTCGGAGAAGCCTaGGGCATAAATCAGCACACTGCTCTGTCTCTTCTT +
Preference number: 3 (lower is better)
Translates to: LYRCYCYSVGEA*GINQHTALSLL
Trigger: AAGAAGAGACAGAGCAGTGTGCTGATTTATGCCTCAGGCTTCTCCGACACTGTAGCAGTAGCATCGGTACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR CCA 72 bp GTTATTTTCCATGATTCGCATGTCCCCAATTCGGACTaGGAACAGGTGTTCATCCAGAGCATTGACCAGAGC +
Preference number: 3 (lower is better)
Translates to: VIFHDSHVPNSD*EQVFIQSIDQS
Trigger: GCTCTGGTCAATGCTCTGGATGAACACCTGTTCCCAGTCCGAATTGGGGACATGCGAATCATGGAAAATAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000634223.1
ENST00000637208.1
3UTR CCA 72 bp CAAAGTTTTGCCTCATTAGTAGGTAAAGGGAGGCACTaGCGTGTGACCGTATTGTACCGATGCTACTGCTAC +
Preference number: 3 (lower is better)
Translates to: QSFASLVGKGRH*RVTVLYRCYCY
Trigger: GTAGCAGTAGCATCGGTACAATACGGTCACACGCCAGTGCCTCCCTTTACCTACTAATGAGGCAAAACTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR-3UTR CAA 90 bp GGTGCAGCTGGGGCTCGGCATGGCATTGCTTGGATCCTCTCCATACATAAACTGAGTTTTTCTTTATTCTaGGTGGCATCTGCTTCTTTG +
Preference number: 3 (lower is better)
Translates to: GAAGARHGIAWILSIHKLSFSLF*VASASL
Trigger: CAAAGAAGCAGATGCCACCAAGAATAAAGAAAAACT...CAGTTTATGTATGGAGAGGATCCAAGCAATGCCATGCCGAGCCCCAGCTGCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614472.5
3UTR-3UTR CAA 90 bp TTCAATGTCAGCCCTATCAAAATCCCAGATGCCTTTGTGCACAAACTGACAGCTGAAGGTGCAGCCAAATaGGAAAACAGTGTGGCAGTC +
Preference number: 3 (lower is better)
Translates to: FNVSPIKIPDAFVHKLTAEGAAK*ENSVAV
Trigger: GACTGCCACACTGTTTTCCAATTTGGCTGCACCTTC...AGCTGTCAGTTTGTGCACAAAGGCATCTGGGATTTTGATAGGGCTGACATTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635827.1
3UTR TCA 72 bp AGACAGTACAGAATAAGCCTGTGGTGGTTTTTCCAATaGGACTGGCAAGCAAAACTGGCCAGTCTTCAACCG +
Preference number: 3 (lower is better)
Translates to: RQYRISLWWFFQ*DWQAKLASLQP
Trigger: CGGTTGAAGACTGGCCAGTTTTGCTTGCCAGTCTCATTGGAAAAACCACCACAGGCTTATTCTGTACTGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000634223.1
ENST00000637208.1
3UTR-3UTR CAA 90 bp GCCTGTGGTGGTTTTTCCAATGAGACTGGCAAGCAAAACTGGCCAGTCTTCAACGTCCATTCTGAAGCATaGGTATCCATGTATATCCAA +
Preference number: 3 (lower is better)
Translates to: ACGGFSNETGKQNWPVFNVHSEA*VSMYIQ
Trigger: TTGGATATACATGGATACCAATGCTTCAGAATGGAC...GTTGAAGACTGGCCAGTTTTGCTTGCCAGTCTCATTGGAAAAACCACCACAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000634223.1
ENST00000637208.1
3UTR-3UTR CAA 90 bp CAATGTCAGCCCTATCAAAATCCCAGATGCCTTTGTGCACAAACTGACAGCTGGATGCTAGTGGAATTTTaGAAGGTGCAGCCAAATTGG +
Preference number: 3 (lower is better)
Translates to: QCQPYQNPRCLCAQTDSWMLVEF*KVQPNW
Trigger: CCAATTTGGCTGCACCTTCAAAAATTCCACTAGCAT...CCAGCTGTCAGTTTGTGCACAAAGGCATCTGGGATTTTGATAGGGCTGACATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635827.1
3UTR TCA 72 bp GGCAAGCAAAACTGGCCAGTCTTCAACCGTCCATTCTaGAGCATTGGTATCCATGTATATCCAACTGGTGTT +
Preference number: 3 (lower is better)
Translates to: GKQNWPVFNRPF*SIGIHVYPTGV
Trigger: AACACCAGTTGGATATACATGGATACCAATGCTTCAGAATGGACGGTTGAAGACTGGCCAGTTTTGCTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634223.1
ENST00000637208.1
3UTR TCA 72 bp GCAATCCAAACAGTCCTTCAGCATCAGGGTCTAAAATaGCAGCCAGCTCTGTTAACACAAGTCCTGCCAAAT +
Preference number: 3 (lower is better)
Translates to: AIQTVLQHQGLK*QPALLTQVLPN
Trigger: ATTTGGCAGGACTTGTGTTAACAGAGCTGGCTGTCATTTTAGACCCTGATGCTGAAGGACTGTTTGGATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR GCA 72 bp CAGTGTCGGAGAAGCCTGAGGCATAAATCAGCACACTaGTCTGTCTCTTCTTCAAATAAGAGTTCAGGAAAC +
Preference number: 3 (lower is better)
Translates to: QCRRSLRHKSAH*SVSSSNKSSGN
Trigger: GTTTCCTGAACTCTTATTTGAAGAAGAGACAGAGCAGTGTGCTGATTTATGCCTCAGGCTTCTCCGACACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR-3UTR CAA 90 bp GTCGCCGTAAGACAGAAGATGGCCTTCTCATATCAGCAAGGAATTTGTAGAGATGCAAAACTGATCTGCTaGACTCTTCAGTTTCTCCAG +
Preference number: 3 (lower is better)
Translates to: VAVRQKMAFSYQQGICRDAKLIC*TLQFLQ
Trigger: CTGGAGAAACTGAAGAGTCAAGCAGATCAGTTTTGC...ATCTCTACAAATTCCTTGCTGATATGAGAAGGCCATCTTCTGTCTTACGGCGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614472.5
3UTR-3UTR CAA 90 bp CAATCTCTGCTCTTGATTTGTCAAGCTTCTCTGTGTTTTGACGCCAGTGAGTCACAGAACTCTGAGATGTaGCAGAAGAAACAGAAGGTG +
Preference number: 3 (lower is better)
Translates to: QSLLLICQASLCFDASESQNSEM*QKKQKV
Trigger: CACCTTCTGTTTCTTCTGCAACATCTCAGAGTTCTG...TGACTCACTGGCGTCAAAACACAGAGAAGCTTGACAAATCAAGAGCAGAGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR GCA 72 bp GATGTGCCCACCAAGGAGGATAGTGACATTGTTACCTaGATTTTAACCCTGGCAAAGTTATTCCCAATCTCA +
Preference number: 3 (lower is better)
Translates to: DVPTKEDSDIVT*ILTLAKLFPIS
Trigger: TGAGATTGGGAATAACTTTGCCAGGGTTAAAATGCAGGTAACAATGTCACTATCCTCCTTGGTGGGCACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR-3UTR CAA 90 bp CTTGACGTCTCTGTGTGCGAAGACATACGATTACAACTTCGATCCATAGCCTGTCCAGATATATCTGGATaGCTATTACTAAGGCTTCGA +
Preference number: 3 (lower is better)
Translates to: LDVSVCEDIRLQLRSIACPDISG*LLLRLR
Trigger: TCGAAGCCTTAGTAATAGCAATCCAGATATATCTGG...ACAGGCTATGGATCGAAGTTGTAATCGTATGTCTTCGCACACAGAGACGTCAAG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR-3UTR CAA 90 bp TATTTTCCAGAGCAGATACCTTCTTCATCTGGAGATACCACATCATCTGAGACCAAGCTTCTCTGTGTTTaGACGCCAGTGAGTCATATC +
Preference number: 3 (lower is better)
Translates to: YFPEQIPSSSGDTTSSETKLLCV*TPVSHI
Trigger: GATATGACTCACTGGCGTCAAAACACAGAGAAGCTT...GGTCTCAGATGATGTGGTATCTCCAGATGAAGAAGGTATCTGCTCTGGAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR TCA 72 bp GTTACAAGCATCATCTCCACTTGTTGTCCTTTCAAGTaGTCGTCTGCCAACAATACTAGAATTCCTCCTCTC +
Preference number: 3 (lower is better)
Translates to: VTSIISTCCPFK*SSANNTRIPPL
Trigger: GAGAGGAGGAATTCTAGTATTGTTGGCAGACGATCACTTGAAAGGACAACAAGTGGAGATGATGCTTGTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614472.5
3UTR GCA 72 bp AGTGTTGTAGATAAACTGCACTTTGGTTACAGGCCATaGTGTGTAGTAGCACTTTTAGCACTCCACCAAGAA +
Preference number: 3 (lower is better)
Translates to: SVVDKLHFGYRP*CVVALLALHQE
Trigger: TTCTTGGTGGAGTGCTAAAAGTGCTACTACACAGCATGGCCTGTAACCAAAGTGCAGTTTATCTACAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR CCA 72 bp TCAGTGGTATGGGATATATTATCAGGTGCTCAGTTATaGGTCTATACCAGTCATCAGGGAGTCACTAACTAC +
Preference number: 3 (lower is better)
Translates to: SVVWDILSGAQL*VYTSHQGVTNY
Trigger: GTAGTTAGTGACTCCCTGATGACTGGTATAGACCCATAACTGAGCACCTGATAATATATCCCATACCACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR-3UTR CAA 90 bp GAATTCCTCCTCTCTGACCAAGACCCTTTTCGTTCTCCAGTACTGATTTCTACTATATTTCCCAAGTCTTaGGCAAAACTGATCTGCTTG +
Preference number: 3 (lower is better)
Translates to: EFLLSDQDPFRSPVLISTIFPKS*AKLICL
Trigger: CAAGCAGATCAGTTTTGCCAAAGACTTGGGAAATAT...AGTAGAAATCAGTACTGGAGAACGAAAAGGGTCTTGGTCAGAGAGGAGGAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614472.5
3UTR-3UTR CAA 90 bp TTCAATGTCAGCCCTATCAAAATCCCAGATGCCTTTGTGCACAAACTGACAGCTCACATGAATGGTCAATaGACTTTCAATAAGGGATCT +
Preference number: 3 (lower is better)
Translates to: FNVSPIKIPDAFVHKLTAHMNGQ*TFNKGS
Trigger: AGATCCCTTATTGAAAGTCAATTGACCATTCATGTG...AGCTGTCAGTTTGTGCACAAAGGCATCTGGGATTTTGATAGGGCTGACATTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635827.1
3UTR CCA 72 bp TCCAAACTCCCAGCACTGCTAACAATATTCATTAAATaGATTGCAGTCCAAGCAAAAGGCATGCGATATTTC +
Preference number: 3 (lower is better)
Translates to: SKLPALLTIFIK*IAVQAKGMRYF
Trigger: GAAATATCGCATGCCTTTTGCTTGGACTGCAATCCATTTAATGAATATTGTTAGCAGTGCTGGGAGTTTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614472.5
3UTR CCA 72 bp CTAATATATAAGCCCAGATGGGGTTTTCCTGTAAGTTaGGGAGCAAGTTATCAATTCAAAGAGCCTTTCTAC +
Preference number: 3 (lower is better)
Translates to: LIYKPRWGFPVS*GASYQFKEPFY
Trigger: GTAGAAAGGCTCTTTGAATTGATAACTTGCTCCCCAACTTACAGGAAAACCCCATCTGGGCTTATATATTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR-3UTR CAA 90 bp CATATTTGCAATCTTTTGGTCTTGTACATTCGTAGAAAATCCAGAACTCTGAGAGTGTTAACCCAGGAATaGGAGCGATCTAAACCCTTA +
Preference number: 3 (lower is better)
Translates to: HICNLLVLYIRRKSRTLRVLTQE*ERSKPL
Trigger: TAAGGGTTTAGATCGCTCCAATTCCTGGGTTAACAC...TCTCAGAGTTCTGGATTTTCTACGAATGTACAAGACCAAAAGATTGCAAATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR CCA 72 bp TTATCATACTTCCGCTCTCACTTTCATAATCATCAGTaGCTATACAAATTGGTCTTCCTCGTTGATTGTGAG +
Preference number: 3 (lower is better)
Translates to: LSYFRSHFHNHQ*LYKLVFLVDCE
Trigger: CTCACAATCAACGAGGAAGACCAATTTGTATAGCCACTGATGATTATGAAAGTGAGAGCGGAAGTATGATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR TCA 72 bp CAATGCACAGATTATCCTTACTGGACTTCAATCCAGTaGAAGATCTACCAGAATACTAGAAAATTAGCTAGG +
Preference number: 3 (lower is better)
Translates to: QCTDYPYWTSIQ*KIYQNTRKLAR
Trigger: CCTAGCTAATTTTCTAGTATTCTGGTAGATCTTTCACTGGATTGAAGTCCAGTAAGGATAATCTGTGCATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR CCA 72 bp GCTCTCACTTTCATAATCATCAGTGGCTATACAAATTaGTCTTCCTCGTTGATTGTGAGTTTCTGTAAAATC +
Preference number: 3 (lower is better)
Translates to: ALTFIIISGYTN*SSSLIVSFCKI
Trigger: GATTTTACAGAAACTCACAATCAACGAGGAAGACCAATTTGTATAGCCACTGATGATTATGAAAGTGAGAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR-3UTR CAA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTTTTTCACACTCGATGTaGAATACATGGCTCTTTGCA +
Preference number: 3 (lower is better)
Translates to: LSMIFILLGLELVLESTLFSHSM*NTWLFA
Trigger: TGCAAAGAGCCATGTATTCAACATCGAGTGTGAAAA...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
37% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
3UTR CCA 72 bp TCCATTCTGAAGCATTGGTATCCATGTATATCCAACTaGTGTTTCAAGAGGAGTATTTTGTTTTTGTTGACA +
Preference number: 3 (lower is better)
Translates to: SILKHWYPCISN*CFKRSILFLLT
Trigger: TGTCAACAAAAACAAAATACTCCTCTTGAAACACCAGTTGGATATACATGGATACCAATGCTTCAGAATGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000634223.1
ENST00000637208.1
CDS-3UTR CCA 90 bp CTCTACGGCCCGGATCCTAACAGGCAGGACAGGTACCTGTCCGCCACCTGGGGATACCTGTCCGCCACCTaGGGATTAGGAACCCCTGCA +
Preference number: 4 (lower is better)
Translates to: LYGPDPNRQDRYLSATWGYLSAT*GLGTPA
Trigger: TGCAGGGGTTCCTAATCCCCAGGTGGCGGACAGGTA...TCCCCAGGTGGCGGACAGGTACCTGTCCTGCCTGTTAGGATCCGGGCCGTAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635827.1
CDS-3UTR GCA 90 bp CTCTACGGCCCGGATCCTAACAGGCAGGACAGGTACCTGTCCGCCACCTGGGGAATCCACTGGATCTACTaGTTCGGTAAGGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: LYGPDPNRQDRYLSATWGIHWIY*FGKGHC
Trigger: ACAGTGCCCCTTACCGAAGCAGTAGATCCAGTGGAT...TCCCCAGGTGGCGGACAGGTACCTGTCCTGCCTGTTAGGATCCGGGCCGTAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635827.1
CDS-3UTR CCA 90 bp GGTGCAGCTGGGGCTCGGCATGGCATTGCTTGGATCCTCTCCATACATAAACTGACTGTCGGTATAGGATaGGTGCAGCTGGGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: GAAGARHGIAWILSIHKLTVGIG*VQLGLG
Trigger: GCCGAGCCCCAGCTGCACCCATCCTATACCGACAGT...CAGTTTATGTATGGAGAGGATCCAAGCAATGCCATGCCGAGCCCCAGCTGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614472.5
CDS-3UTR TCA 90 bp GCAAAGCTGATTCCCGAACGCTGCCACTGCAAACAACCCACTGCAAAGCCAGCTTGTGGCATAATGCACTaGTCCTCCCAAACCCCCAGG +
Preference number: 4 (lower is better)
Translates to: AKLIPERCHCKQPTAKPACGIMH*SSQTPR
Trigger: CCTGGGGGTTTGGGAGGATCAGTGCATTATGCCACA...AGCTGGCTTTGCAGTGGGTTGTTTGCAGTGGCAGCGTTCGGGAATCAGCTTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR CAA 72 bp CAGGCCTTGTTAGTTGAGGGACCGATGTCCCTGCGATaGCCATGGCAACGGTCTGGCTTATCATACTTCCGC +
Preference number: 4 (lower is better)
Translates to: QALLVEGPMSLR*PWQRSGLSYFR
Trigger: GCGGAAGTATGATAAGCCAGACCGTTGCCATGGCAATCGCAGGGACATCGGTCCCTCAACTAACAAGGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CCA 90 bp AGACTGGCAAGCAAAACTGGCCAGTCTTCAACCGTCCATTCTGAAGCATTGGTAGTTCTGCTGATCTTCTaGGCGAAGGCGCGGCGCTCG +
Preference number: 4 (lower is better)
Translates to: RLASKTGQSSTVHSEALVVLLIF*AKARRS
Trigger: CGAGCGCCGCGCCTTCGCCCAGAAGATCAGCAGAAC...TACCAATGCTTCAGAATGGACGGTTGAAGACTGGCCAGTTTTGCTTGCCAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CCA 90 bp CATGTCCCCAATTCGGACTGGGAACAGGTGTTCATCCAGAGCATTGACCAGAGCATTCTGCACTTGGACTaGGGTTGGATCCCCATGGGG +
Preference number: 4 (lower is better)
Translates to: HVPNSDWEQVFIQSIDQSILHLD*GWIPMG
Trigger: CCCCATGGGGATCCAACCCCAGTCCAAGTGCAGAAT...GCTCTGGTCAATGCTCTGGATGAACACCTGTTCCCAGTCCGAATTGGGGACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR CAA 72 bp TCTCTCGAGCTGTCCTCGGCTTCGCCGTACCATTTCTaGCCTGGCACCTATGCTCCCAAGAATAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SLELSSASPYHF*PGTYAPKNSFF
Trigger: GAAGAAGCTATTCTTGGGAGCATAGGTGCCAGGCAAGAAATGGTACGGCGAAGCCGAGGACAGCTCGAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp GCAAGCAAAACTGGCCAGTCTTCAACCGTCCATTCTGAAGCATTGGTATCCATGCCAGGCCTTGTTAGTTaGGGGACCGATGTCCCTGCG +
Preference number: 4 (lower is better)
Translates to: ASKTGQSSTVHSEALVSMPGLVS*GTDVPA
Trigger: CGCAGGGACATCGGTCCCTCAACTAACAAGGCCTGG...CATGGATACCAATGCTTCAGAATGGACGGTTGAAGACTGGCCAGTTTTGCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CCA 90 bp CTCTACGGCCCGGATCCTAACAGGCAGGACAGGTACCTGTCCGCCACCTGGGGAACAGTCTCTAACATGTaGATCCATTTCACTTTCTTC +
Preference number: 4 (lower is better)
Translates to: LYGPDPNRQDRYLSATWGTVSNM*IHFTFF
Trigger: GAAGAAAGTGAAATGGATCCACATGTTAGAGACTGT...TCCCCAGGTGGCGGACAGGTACCTGTCCTGCCTGTTAGGATCCGGGCCGTAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635827.1
CDS-3UTR CCA 90 bp AACTGTCGGTATAGGATGGGTGCAGCTGGGGCTCGGCATGGCATTGCTTGGATCCACTGTGAGAGTAGCTaGTCGAAAGCTCGTCAAGTT +
Preference number: 4 (lower is better)
Translates to: NCRYRMGAAGARHGIAWIHCESS*SKARQV
Trigger: AACTTGACGAGCTTTCGACCAGCTACTCTCACAGTG...GATCCAAGCAATGCCATGCCGAGCCCCAGCTGCACCCATCCTATACCGACAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614472.5
CDS-3UTR CCA 90 bp ATGTCCCTGCGATTGCCATGGCAACGGTCTGGCTTATCATACTTCCGCTCTCACGCCATGGCAACGGTCTaGCTTATCATACTTCCGCTC +
Preference number: 4 (lower is better)
Translates to: MSLRLPWQRSGLSYFRSHAMATV*LIILPL
Trigger: GAGCGGAAGTATGATAAGCCAGACCGTTGCCATGGC...GTGAGAGCGGAAGTATGATAAGCCAGACCGTTGCCATGGCAATCGCAGGGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CCA 90 bp ATGTCCCTGCGATTGCCATGGCAACGGTCTGGCTTATCATACTTCCGCTCTCACATCAGGAGACCGGCATaGCATTGCTTGGATCCTCTC +
Preference number: 4 (lower is better)
Translates to: MSLRLPWQRSGLSYFRSHIRRPA*HCLDPL
Trigger: GAGAGGATCCAAGCAATGCCATGCCGGTCTCCTGAT...GTGAGAGCGGAAGTATGATAAGCCAGACCGTTGCCATGGCAATCGCAGGGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR CAA 72 bp TTAGTAGGTAAAGGGAGGCACTGGCGTGTGACCGTATaGTACCGATGCTACTGCTACAGTGTCGGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: LVGKGRHWRVTV*YRCYCYSVGEA
Trigger: GGCTTCTCCGACACTGTAGCAGTAGCATCGGTACAATACGGTCACACGCCAGTGCCTCCCTTTACCTACTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp CATGTCCCCAATTCGGACTGGGAACAGGTGTTCATCCAGAGCATTGACCAGAGCTTGGGGCCAGGAGTTTaGGATCAACCTGAGCAACAT +
Preference number: 4 (lower is better)
Translates to: HVPNSDWEQVFIQSIDQSLGPGV*DQPEQH
Trigger: ATGTTGCTCAGGTTGATCTCAAACTCCTGGCCCCAA...GCTCTGGTCAATGCTCTGGATGAACACCTGTTCCCAGTCCGAATTGGGGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR GCA 90 bp GCCTGTGGTGGTTTTTCCAATGAGACTGGCAAGCAAAACTGGCCAGTCTTCAACCCCGAACGCTGCCACTaGAAACAACCCACTGCAAAG +
Preference number: 4 (lower is better)
Translates to: ACGGFSNETGKQNWPVFNPERCH*KQPTAK
Trigger: CTTTGCAGTGGGTTGTTTGCAGTGGCAGCGTTCGGG...GTTGAAGACTGGCCAGTTTTGCTTGCCAGTCTCATTGGAAAAACCACCACAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CCA 90 bp AACTGTCGGTATAGGATGGGTGCAGCTGGGGCTCGGCATGGCATTGCTTGGATCCGGCATGGCATTGCTTaGATCCTCTCCATACATAAA +
Preference number: 4 (lower is better)
Translates to: NCRYRMGAAGARHGIAWIRHGIA*ILSIHK
Trigger: TTTATGTATGGAGAGGATCCAAGCAATGCCATGCCG...GATCCAAGCAATGCCATGCCGAGCCCCAGCTGCACCCATCCTATACCGACAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614472.5
CDS-3UTR CCA 90 bp TCCCCAATTCGGACTGGGAACAGGTGTTCATCCAGAGCATTGACCAGAGCAAAATGCAGCCTTGATGCCTaGGGTGAAGCAATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: SPIRTGNRCSSRALTRAKCSLDA*GEAILL
Trigger: CAGGAGGATTGCTTCACCCCAGGCATCAAGGCTGCA...TTTTGCTCTGGTCAATGCTCTGGATGAACACCTGTTCCCAGTCCGAATTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp AACTGTCGGTATAGGATGGGTGCAGCTGGGGCTCGGCATGGCATTGCTTGGATCTTCTTCCTCATCTGGTaGTGGATGCAAAGCAAAAAG +
Preference number: 4 (lower is better)
Translates to: NCRYRMGAAGARHGIAWIFFLIW*WMQSKK
Trigger: CTTTTTGCTTTGCATCCATCACCAGATGAGGAAGAA...GATCCAAGCAATGCCATGCCGAGCCCCAGCTGCACCCATCCTATACCGACAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614472.5
CDS-3UTR TCA 90 bp AAACTGGCCAGTCTTCAACCGTCCATTCTGAAGCATTGGTATCCATGTATATCCTGCCACTCGTTGACGTaGGGAGGAAACTGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: KLASLQPSILKHWYPCISCHSLT*GGNCQA
Trigger: GGCCTGGCAGTTTCCTCCTCACGTCAACGAGTGGCA...GGATATACATGGATACCAATGCTTCAGAATGGACGGTTGAAGACTGGCCAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp CAATGTCAGCCCTATCAAAATCCCAGATGCCTTTGTGCACAAACTGACAGCTGGATGCCACTACTGATCTaGGAGGAGGCAGAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: QCQPYQNPRCLCAQTDSWMPLLI*EEAELR
Trigger: CCTGAGCTCTGCCTCCTCTCAGATCAGTAGTGGCAT...CCAGCTGTCAGTTTGTGCACAAAGGCATCTGGGATTTTGATAGGGCTGACATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635827.1
CDS-3UTR GCA 90 bp ATGTCCCTGCGATTGCCATGGCAACGGTCTGGCTTATCATACTTCCGCTCTCACACCGTATTGTACCGATaGTACTGCTACAGTGTCGGA +
Preference number: 4 (lower is better)
Translates to: MSLRLPWQRSGLSYFRSHTVLYR*YCYSVG
Trigger: TCCGACACTGTAGCAGTAGCATCGGTACAATACGGT...GTGAGAGCGGAAGTATGATAAGCCAGACCGTTGCCATGGCAATCGCAGGGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CCA 90 bp TTAGGAACCCCTGCAGTAAAGCACTGGCATACAGATCAGTGGAATGGGATGGAGGGTCCCCAACCTTTCTaGCACCAAGGACTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: LGTPAVKHWHTDQWNGMEGPQPF*HQGLVS
Trigger: TGAAACCAGTCCTTGGTGCCAGAAAGGTTGGGGACC...CTCCATCCCATTCCACTGATCTGTATGCCAGTGCTTTACTGCAGGGGTTCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635827.1
CDS-3UTR CCA 90 bp GCCTGTGGTGGTTTTTCCAATGAGACTGGCAAGCAAAACTGGCCAGTCTTCAACATCAGGAGACCGGCATaGCATTGCTTGGATCCTCTC +
Preference number: 4 (lower is better)
Translates to: ACGGFSNETGKQNWPVFNIRRPA*HCLDPL
Trigger: GAGAGGATCCAAGCAATGCCATGCCGGTCTCCTGAT...GTTGAAGACTGGCCAGTTTTGCTTGCCAGTCTCATTGGAAAAACCACCACAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000634223.1
ENST00000637208.1
CDS-3UTR TCA 90 bp GGTGCAGCTGGGGCTCGGCATGGCATTGCTTGGATCCTCTCCATACATAAACTGTGTTGTCCTTTCAAGTaGTCGTCTGCCAACAATACT +
Preference number: 4 (lower is better)
Translates to: GAAGARHGIAWILSIHKLCCPFK*SSANNT
Trigger: AGTATTGTTGGCAGACGATCACTTGAAAGGACAACA...CAGTTTATGTATGGAGAGGATCCAAGCAATGCCATGCCGAGCCCCAGCTGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614472.5
CDS-3UTR TCA 90 bp CGCATGTCCCCAATTCGGACTGGGAACAGGTGTTCATCCAGAGCATTGACCAGAGAGTTCAGGAAACTTTaGAACCAAGGCTCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: RMSPIRTGNRCSSRALTREFRKL*NQGSLC
Trigger: ACACAGAGAGCCTTGGTTTCAAAGTTTCCTGAACTC...TCTGGTCAATGCTCTGGATGAACACCTGTTCCCAGTCCGAATTGGGGACATGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp CTAGATCCCCTGCATGTGCAGCTCACAATAGGGTTCATGCTCCTACCAGAATCTAAGACTCTGGGGGAATaGGGAGTGACCACTGCTAAT +
Preference number: 4 (lower is better)
Translates to: LDPLHVQLTIGFMLLPESKTLGE*GVTTAN
Trigger: ATTAGCAGTGGTCACTCCTCATTCCCCCAGAGTCTT...AGATTCTGGTAGGAGCATGAACCCTATTGTGAGCTGCACATGCAGGGGATCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635827.1
CDS-3UTR TCA 90 bp GCAAAGCTGATTCCCGAACGCTGCCACTGCAAACAACCCACTGCAAAGCCAGCTCTAACTTTACCTTTCTaGGGTAAAGGCTCATGGATG +
Preference number: 4 (lower is better)
Translates to: AKLIPERCHCKQPTAKPALTLPF*GKGSWM
Trigger: CATCCATGAGCCTTTACCTCAGAAAGGTAAAGTTAG...AGCTGGCTTTGCAGTGGGTTGTTTGCAGTGGCAGCGTTCGGGAATCAGCTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR GCA 90 bp AGACAGATCAAAAGGCTTCGACTTGATTCTGCTGAAAAGGTAGTGTGTTGCCTGAGGGACCGATGTCCCTaGGATTGCCATGGCAACGGT +
Preference number: 4 (lower is better)
Translates to: RQIKRLRLDSAEKVVCCLRDRCP*DCHGNG
Trigger: ACCGTTGCCATGGCAATCGCAGGGACATCGGTCCCT...CAGGCAACACACTACCTTTTCAGCAGAATCAAGTCGAAGCCTTTTGATCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR GCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTGTGCCTCCTCGCTCGTaGTCCCTCCCTCGCGGCCTC +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLVPPRS*SLPRGL
Trigger: GAGGCCGCGAGGGAGGGAGCACGAGCGAGGAGGCAC...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635253.2
CDS-3UTR GCA 90 bp AGACTGGCAAGCAAAACTGGCCAGTCTTCAACCGTCCATTCTGAAGCATTGGTAACCATCATAGCTCACTaGAGCCTTGATGCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: RLASKTGQSSTVHSEALVTIIAH*SLDAWG
Trigger: ACCCCAGGCATCAAGGCTGCAGTGAGCTATGATGGT...TACCAATGCTTCAGAATGGACGGTTGAAGACTGGCCAGTTTTGCTTGCCAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR GCA 90 bp TCCCCAATTCGGACTGGGAACAGGTGTTCATCCAGAGCATTGACCAGAGCAAAAAGGTGTGGGCCACTGTaGCTGACCTGTTTTACTTTC +
Preference number: 4 (lower is better)
Translates to: SPIRTGNRCSSRALTRAKRCGPL*LTCFTF
Trigger: GAAAGTAAAACAGGTCAGGCACAGTGGCCCACACCT...TTTTGCTCTGGTCAATGCTCTGGATGAACACCTGTTCCCAGTCCGAATTGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CCA 90 bp GCAAGCAAAACTGGCCAGTCTTCAACCGTCCATTCTGAAGCATTGGTATCCATGGTCCCCAATTCGGACTaGGAACAGGTGTTCATCCAG +
Preference number: 4 (lower is better)
Translates to: ASKTGQSSTVHSEALVSMVPNSD*EQVFIQ
Trigger: CTGGATGAACACCTGTTCCCAGTCCGAATTGGGGAC...CATGGATACCAATGCTTCAGAATGGACGGTTGAAGACTGGCCAGTTTTGCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000634223.1
ENST00000637208.1
CDS-3UTR CCA 90 bp TGGCAAGCAAAACTGGCCAGTCTTCAACCGTCCATTCTGAAGCATTGGTATCCACCATGGGGCAGCTTTTaGACCACCAGTGTTAACCCA +
Preference number: 4 (lower is better)
Translates to: WQAKLASLQPSILKHWYPPWGSF*TTSVNP
Trigger: TGGGTTAACACTGGTGGTCCAAAAGCTGCCCCATGG...TGGATACCAATGCTTCAGAATGGACGGTTGAAGACTGGCCAGTTTTGCTTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CCA 90 bp GCAAGCAAAACTGGCCAGTCTTCAACCGTCCATTCTGAAGCATTGGTATCCATGGGTAAAGGGAGGCACTaGCGTGTGACCGTATTGTAC +
Preference number: 4 (lower is better)
Translates to: ASKTGQSSTVHSEALVSMGKGRH*RVTVLY
Trigger: GTACAATACGGTCACACGCCAGTGCCTCCCTTTACC...CATGGATACCAATGCTTCAGAATGGACGGTTGAAGACTGGCCAGTTTTGCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CCA 90 bp GCCTGTGGTGGTTTTTCCAATGAGACTGGCAAGCAAAACTGGCCAGTCTTCAACGGTCAATCGCAGATCTaGAGAGGTCTGGTAACCCTT +
Preference number: 4 (lower is better)
Translates to: ACGGFSNETGKQNWPVFNGQSQI*RGLVTL
Trigger: AAGGGTTACCAGACCTCTCCAGATCTGCGATTGACC...GTTGAAGACTGGCCAGTTTTGCTTGCCAGTCTCATTGGAAAAACCACCACAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR CAA 72 bp GGGGCAGCTTTTGGACCACCAGTGTTAACCCAGGAATaGGAGCGATCTAAACCCTTACTCCCGATGATTGAT +
Preference number: 4 (lower is better)
Translates to: GAAFGPPVLTQE*ERSKPLLPMID
Trigger: ATCAATCATCGGGAGTAAGGGTTTAGATCGCTCCAATTCCTGGGTTAACACTGGTGGTCCAAAAGCTGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp CATGTCCCCAATTCGGACTGGGAACAGGTGTTCATCCAGAGCATTGACCAGAGCAACCCTTACTCCCGATaGTTGATCGAACTTCATCAT +
Preference number: 4 (lower is better)
Translates to: HVPNSDWEQVFIQSIDQSNPYSR*LIELHH
Trigger: ATGATGAAGTTCGATCAATCATCGGGAGTAAGGGTT...GCTCTGGTCAATGCTCTGGATGAACACCTGTTCCCAGTCCGAATTGGGGACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp TCAGTTTATCTAGCAGAAGATGAAGAAATCGGACCACTGGTTCCAGCTGGGATGCGCGGGTCTGAGTCGTaGCTGGAGAGTAAATTGTGT +
Preference number: 4 (lower is better)
Translates to: SVYLAEDEEIGPLVPAGMRGSES*LESKLC
Trigger: ACACAATTTACTCTCCAGTCACGACTCAGACCCGCG...CATCCCAGCTGGAACCAGTGGTCCGATTTCTTCATCTTCTGCTAGATAAACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR GCA 90 bp ATTTCATGCCAGGTAGAGGAACCTCAGGAGACAGTACAGAATAAGCCTGTGGTGATCCACTGGATCTACTaGTTCGGTAAGGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: ISCQVEEPQETVQNKPVVIHWIY*FGKGHC
Trigger: ACAGTGCCCCTTACCGAAGCAGTAGATCCAGTGGAT...CACCACAGGCTTATTCTGTACTGTCTCCTGAGGTTCCTCTACCTGGCATGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR GCA 90 bp CATGTCCCCAATTCGGACTGGGAACAGGTGTTCATCCAGAGCATTGACCAGAGCCTGAAACAAGAGTTCTaGAGTCCCGAGGACTATAAA +
Preference number: 4 (lower is better)
Translates to: HVPNSDWEQVFIQSIDQSLKQEF*SPEDYK
Trigger: TTTATAGTCCTCGGGACTGCAGAACTCTTGTTTCAG...GCTCTGGTCAATGCTCTGGATGAACACCTGTTCCCAGTCCGAATTGGGGACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR GCA 90 bp CAATGTCAGCCCTATCAAAATCCCAGATGCCTTTGTGCACAAACTGACAGCTGGCATCCTGGTAGCTGTTaGCATCTGGAGCTTCATCAG +
Preference number: 4 (lower is better)
Translates to: QCQPYQNPRCLCAQTDSWHPGSC*HLELHQ
Trigger: CTGATGAAGCTCCAGATGGCAACAGCTACCAGGATG...CCAGCTGTCAGTTTGTGCACAAAGGCATCTGGGATTTTGATAGGGCTGACATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635827.1
CDS-3UTR GCA 90 bp ATGTCCCTGCGATTGCCATGGCAACGGTCTGGCTTATCATACTTCCGCTCTCACCTTGACGTCTCTGTGTaGGAAGACATACGATTACAA +
Preference number: 4 (lower is better)
Translates to: MSLRLPWQRSGLSYFRSHLDVSV*EDIRLQ
Trigger: TTGTAATCGTATGTCTTCGCACACAGAGACGTCAAG...GTGAGAGCGGAAGTATGATAAGCCAGACCGTTGCCATGGCAATCGCAGGGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR GCA 90 bp ATGTCCCTGCGATTGCCATGGCAACGGTCTGGCTTATCATACTTCCGCTCTCACGTTTCCATCAATCAGTaGTTCGTGTTCAATCTCTGC +
Preference number: 4 (lower is better)
Translates to: MSLRLPWQRSGLSYFRSHVSINQ*FVFNLC
Trigger: GCAGAGATTGAACACGAAGCACTGATTGATGGAAAC...GTGAGAGCGGAAGTATGATAAGCCAGACCGTTGCCATGGCAATCGCAGGGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR GCA 90 bp AGACTGGCAAGCAAAACTGGCCAGTCTTCAACCGTCCATTCTGAAGCATTGGTATTGCTTCGTTCTGAGTaGTTGCCTGCCATGTTCTGC +
Preference number: 4 (lower is better)
Translates to: RLASKTGQSSTVHSEALVLLRSE*LPAMFC
Trigger: GCAGAACATGGCAGGCAAGCACTCAGAACGAAGCAA...TACCAATGCTTCAGAATGGACGGTTGAAGACTGGCCAGTTTTGCTTGCCAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR GCA 90 bp AGACTGGCAAGCAAAACTGGCCAGTCTTCAACCGTCCATTCTGAAGCATTGGTAAGACCGGCATGGCATTaGTTGGATCCTCTCCATACA +
Preference number: 4 (lower is better)
Translates to: RLASKTGQSSTVHSEALVRPAWH*LDPLHT
Trigger: TGTATGGAGAGGATCCAAGCAATGCCATGCCGGTCT...TACCAATGCTTCAGAATGGACGGTTGAAGACTGGCCAGTTTTGCTTGCCAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634223.1
ENST00000637208.1
CDS-3UTR GCA 90 bp TATTTTCCAGAGCAGATACCTTCTTCATCTGGAGATACCACATCATCTGAGACCGTGAAGCAATCCTCCTaGCTCTGCCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: YFPEQIPSSSGDTTSSETVKQSS*LCLPSS
Trigger: GCTACTCGGGAGGCAGAGGCAGGAGGATTGCTTCAC...GGTCTCAGATGATGTGGTATCTCCAGATGAAGAAGGTATCTGCTCTGGAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCGTTCTGCTGATCTTCTaGGCGAAGGCGCGGCGCTCG +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTVLLIF*AKARRS
Trigger: CGAGCGCCGCGCCTTCGCCCAGAAGATCAGCAGAAC...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp TGGCAAGCAAAACTGGCCAGTCTTCAACCGTCCATTCTGAAGCATTGGTATCCAACAAGTGCTGCTGAGTaGACTAGACACTGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: WQAKLASLQPSILKHWYPTSAAE*TRHCAA
Trigger: AGCTGCACAGTGTCTAGTCCACTCAGCAGCACTTGT...TGGATACCAATGCTTCAGAATGGACGGTTGAAGACTGGCCAGTTTTGCTTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CCA 90 bp AAAATTTGTCACTGTGAGAGTAGCTGGTCGAAAGCTCGTCAAGTTACAAGCATCAGCTGGGGCTCGGCATaGCATTGCTTGGATCCTCTC +
Preference number: 4 (lower is better)
Translates to: KICHCESSWSKARQVTSISWGSA*HCLDPL
Trigger: GAGAGGATCCAAGCAATGCCATGCCGAGCCCCAGCT...GATGCTTGTAACTTGACGAGCTTTCGACCAGCTACTCTCACAGTGACAAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614472.5
CDS-3UTR CCA 90 bp TTAGGAACCCCTGCAGTAAAGCACTGGCATACAGATCAGTGGAATGGGATGGAGAAGGTGCAGCCAAATTaGAAAACAGTGTGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: LGTPAVKHWHTDQWNGMEKVQPN*KTVWQS
Trigger: GGACTGCCACACTGTTTTCCAATTTGGCTGCACCTT...CTCCATCCCATTCCACTGATCTGTATGCCAGTGCTTTACTGCAGGGGTTCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635827.1
CDS-3UTR CCA 90 bp TTAGGAACCCCTGCAGTAAAGCACTGGCATACAGATCAGTGGAATGGGATGGAGTGGCATACAGATCAGTaGAATGGGATGGAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: LGTPAVKHWHTDQWNGMEWHTDQ*NGMESP
Trigger: TGGACTCTCCATCCCATTCCACTGATCTGTATGCCA...CTCCATCCCATTCCACTGATCTGTATGCCAGTGCTTTACTGCAGGGGTTCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635827.1
CDS-3UTR TCA 90 bp GGTGCAGCTGGGGCTCGGCATGGCATTGCTTGGATCCTCTCCATACATAAACTGTTTCTAGCAGAACCTTaGCGATTGGCAAAATTAAGA +
Preference number: 4 (lower is better)
Translates to: GAAGARHGIAWILSIHKLFLAEP*RLAKLR
Trigger: TCTTAATTTTGCCAATCGTCAAGGTTCTGCTAGAAA...CAGTTTATGTATGGAGAGGATCCAAGCAATGCCATGCCGAGCCCCAGCTGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614472.5
CDS-3UTR TCA 90 bp ATGTCCCTGCGATTGCCATGGCAACGGTCTGGCTTATCATACTTCCGCTCTCACCTAAGTTATTTTCCATaGTTCGCATGTCCCCAATTC +
Preference number: 4 (lower is better)
Translates to: MSLRLPWQRSGLSYFRSHLSYFP*FACPQF
Trigger: GAATTGGGGACATGCGAATCATGGAAAATAACTTAG...GTGAGAGCGGAAGTATGATAAGCCAGACCGTTGCCATGGCAATCGCAGGGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp ATTTCATGCCAGGTAGAGGAACCTCAGGAGACAGTACAGAATAAGCCTGTGGTGAACTTCATCATCTGGTaGCGTGGGAGTCCCAGATAT +
Preference number: 4 (lower is better)
Translates to: ISCQVEEPQETVQNKPVVNFIIW*RGSPRY
Trigger: ATATCTGGGACTCCCACGTCACCAGATGATGAAGTT...CACCACAGGCTTATTCTGTACTGTCTCCTGAGGTTCCTCTACCTGGCATGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp GTAGATAAACTGCACTTTGGTTACAGGCCATGCTGTGTAGTAGCACTTTTAGCAGGCTTGTTGCAAAGCTaGTTCCCGAACGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: VDKLHFGYRPCCVVALLAGLLQS*FPNAAT
Trigger: AGTGGCAGCGTTCGGGAATCAGCTTTGCAACAAGCC...TGCTAAAAGTGCTACTACACAGCATGGCCTGTAACCAAAGTGCAGTTTATCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp CGCATGTCCCCAATTCGGACTGGGAACAGGTGTTCATCCAGAGCATTGACCAGAGAAAATCCAGAACTCTaGGATGTTGCAGAAGAAACA +
Preference number: 4 (lower is better)
Translates to: RMSPIRTGNRCSSRALTRENPEL*DVAEET
Trigger: TGTTTCTTCTGCAACATCTCAGAGTTCTGGATTTTC...TCTGGTCAATGCTCTGGATGAACACCTGTTCCCAGTCCGAATTGGGGACATGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp GCAAAGCTGATTCCCGAACGCTGCCACTGCAAACAACCCACTGCAAAGCCAGCTGTAAAATCATACAGCTaGGGTACAGTTTCCATGATA +
Preference number: 4 (lower is better)
Translates to: AKLIPERCHCKQPTAKPAVKSYS*GTVSMI
Trigger: TATCATGGAAACTGTACCTCAGCTGTATGATTTTAC...AGCTGGCTTTGCAGTGGGTTGTTTGCAGTGGCAGCGTTCGGGAATCAGCTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCCAGGCCTTGTTAGTTaGGGGACCGATGTCCCTGCG +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTPGLVS*GTDVPA
Trigger: CGCAGGGACATCGGTCCCTCAACTAACAAGGCCTGG...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCTGCCACTCGTTGACGTaGGGAGGAAACTGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTCHSLT*GGNCQA
Trigger: GGCCTGGCAGTTTCCTCCTCACGTCAACGAGTGGCA...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp ATGTCCCTGCGATTGCCATGGCAACGGTCTGGCTTATCATACTTCCGCTCTCACTCACATTTACCCACTTaGCTACCCAAAAGTACTTGT +
Preference number: 4 (lower is better)
Translates to: MSLRLPWQRSGLSYFRSHSHLPT*LPKSTC
Trigger: ACAAGTACTTTTGGGTAGTCAAGTGGGTAAATGTGA...GTGAGAGCGGAAGTATGATAAGCCAGACCGTTGCCATGGCAATCGCAGGGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp GTAGATAAACTGCACTTTGGTTACAGGCCATGCTGTGTAGTAGCACTTTTAGCAAGCCTTCCAAGTAGCTaGGACCACAGGTACATGCCC +
Preference number: 4 (lower is better)
Translates to: VDKLHFGYRPCCVVALLASLPSS*DHRYMP
Trigger: GGGCATGTACCTGTGGTCTCAGCTACTTGGAAGGCT...TGCTAAAAGTGCTACTACACAGCATGGCCTGTAACCAAAGTGCAGTTTATCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp TCAGTTTATCTAGCAGAAGATGAAGAAATCGGACCACTGGTTCCAGCTGGGATGACTCTTGGGCCTAAGTaGTCTTCCTGCTTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: SVYLAEDEEIGPLVPAGMTLGPK*SSCFSL
Trigger: GAGACTGAAGCAGGAAGATCACTTAGGCCCAAGAGT...CATCCCAGCTGGAACCAGTGGTCCGATTTCTTCATCTTCTGCTAGATAAACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR GCA 90 bp TCAGTTTATCTAGCAGAAGATGAAGAAATCGGACCACTGGTTCCAGCTGGGATGCTTCCTAACTTCGGCTaGCACCGTTCTGCTGATCTT +
Preference number: 4 (lower is better)
Translates to: SVYLAEDEEIGPLVPAGMLPNFG*HRSADL
Trigger: AAGATCAGCAGAACGGTGGCAGCCGAAGTTAGGAAG...CATCCCAGCTGGAACCAGTGGTCCGATTTCTTCATCTTCTGCTAGATAAACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR GCA 90 bp GGTGCAGCTGGGGCTCGGCATGGCATTGCTTGGATCCTCTCCATACATAAACTGTCATCTGGTGATGGATaGAAAGCAAAAAGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: GAAGARHGIAWILSIHKLSSGDG*KAKSSL
Trigger: CAAAGAACTTTTTGCTTTGCATCCATCACCAGATGA...CAGTTTATGTATGGAGAGGATCCAAGCAATGCCATGCCGAGCCCCAGCTGCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614472.5
CDS-3UTR GCA 90 bp ATTTCATGCCAGGTAGAGGAACCTCAGGAGACAGTACAGAATAAGCCTGTGGTGAAGAACCAGGCTTGTTaGAAAGCTGATTCCCGAACG +
Preference number: 4 (lower is better)
Translates to: ISCQVEEPQETVQNKPVVKNQAC*KADSRT
Trigger: CGTTCGGGAATCAGCTTTGCAACAAGCCTGGTTCTT...CACCACAGGCTTATTCTGTACTGTCTCCTGAGGTTCCTCTACCTGGCATGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR GCA 90 bp TATTTTCCAGAGCAGATACCTTCTTCATCTGGAGATACCACATCATCTGAGACCCGCCGTACCATTTCTTaGCTGGCACCTATGCTCCCA +
Preference number: 4 (lower is better)
Translates to: YFPEQIPSSSGDTTSSETRRTIS*LAPMLP
Trigger: TGGGAGCATAGGTGCCAGGCAAGAAATGGTACGGCG...GGTCTCAGATGATGTGGTATCTCCAGATGAAGAAGGTATCTGCTCTGGAAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR GCA 90 bp CGCATGTCCCCAATTCGGACTGGGAACAGGTGTTCATCCAGAGCATTGACCAGATTTGGTTACAGGCCATaGTGTGTAGTAGCACTTTTA +
Preference number: 4 (lower is better)
Translates to: RMSPIRTGNRCSSRALTRFGYRP*CVVALL
Trigger: TAAAAGTGCTACTACACAGCATGGCCTGTAACCAAA...TCTGGTCAATGCTCTGGATGAACACCTGTTCCCAGTCCGAATTGGGGACATGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR GCA 90 bp GTCGCCGTAAGACAGAAGATGGCCTTCTCATATCAGCAAGGAATTTGTAGAGATGGCTCGGCATGGCATTaGTTGGATCCTCTCCATACA +
Preference number: 4 (lower is better)
Translates to: VAVRQKMAFSYQQGICRDGSAWH*LDPLHT
Trigger: TGTATGGAGAGGATCCAAGCAATGCCATGCCGAGCC...ATCTCTACAAATTCCTTGCTGATATGAGAAGGCCATCTTCTGTCTTACGGCGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614472.5
CDS-3UTR GCA 90 bp GAGAGTAGCTGGTCGAAAGCTCGTCAAGTTACAAGCATCATCTCCACTTGTTGTGTAAGACATCGTCCCTaGCCTCAAGGAGCTCACAAT +
Preference number: 4 (lower is better)
Translates to: ESSWSKARQVTSIISTCCVRHRP*PQGAHN
Trigger: ATTGTGAGCTCCTTGAGGGCAGGGACGATGTCTTAC...ACAACAAGTGGAGATGATGCTTGTAACTTGACGAGCTTTCGACCAGCTACTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614472.5
CDS-3UTR GCA 90 bp CATTCTGAAGCATTGGTATCCATGTATATCCAACTGGTGTTTCAAGAGGAGTATCAATCCTCCTGCCTCTaGCTCCCGAGTAGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: HSEALVSMYIQLVFQEEYQSSCL*LPSSWE
Trigger: CTCCCAGCTACTCGGGAGGCAGAGGCAGGAGGATTG...ATACTCCTCTTGAAACACCAGTTGGATATACATGGATACCAATGCTTCAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR GCA 90 bp GCAAGCAAAACTGGCCAGTCTTCAACCGTCCATTCTGAAGCATTGGTATCCATGTCACCCAGGCTAGAGTaGAGTGGTGATCATAGTTCA +
Preference number: 4 (lower is better)
Translates to: ASKTGQSSTVHSEALVSMSPRLE*SGDHSS
Trigger: TGAACTATGATCACCACTGCACTCTAGCCTGGGTGA...CATGGATACCAATGCTTCAGAATGGACGGTTGAAGACTGGCCAGTTTTGCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CCA 90 bp GCAAGCAAAACTGGCCAGTCTTCAACCGTCCATTCTGAAGCATTGGTATCCATGCACTGTGAGAGTAGCTaGTCGAAAGCTCGTCAAGTT +
Preference number: 4 (lower is better)
Translates to: ASKTGQSSTVHSEALVSMHCESS*SKARQV
Trigger: AACTTGACGAGCTTTCGACCAGCTACTCTCACAGTG...CATGGATACCAATGCTTCAGAATGGACGGTTGAAGACTGGCCAGTTTTGCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CCA 90 bp CAATCTCTGCTCTTGATTTGTCAAGCTTCTCTGTGTTTTGACGCCAGTGAGTCAGTCCCCAATTCGGACTaGGAACAGGTGTTCATCCAG +
Preference number: 4 (lower is better)
Translates to: QSLLLICQASLCFDASESVPNSD*EQVFIQ
Trigger: CTGGATGAACACCTGTTCCCAGTCCGAATTGGGGAC...TGACTCACTGGCGTCAAAACACAGAGAAGCTTGACAAATCAAGAGCAGAGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CCA 90 bp TCTAAGTTATTTTCCATGATTCGCATGTCCCCAATTCGGACTGGGAACAGGTGTTCCCTGCGATTGCCATaGCAACGGTCTGGCTTATCA +
Preference number: 4 (lower is better)
Translates to: SKLFSMIRMSPIRTGNRCSLRLP*QRSGLS
Trigger: TGATAAGCCAGACCGTTGCCATGGCAATCGCAGGGA...ACACCTGTTCCCAGTCCGAATTGGGGACATGCGAATCATGGAAAATAACTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CCA 90 bp CGCATGTCCCCAATTCGGACTGGGAACAGGTGTTCATCCAGAGCATTGACCAGAATATATAAGCCCAGATaGGGTTTTCCTGTAAGTTGG +
Preference number: 4 (lower is better)
Translates to: RMSPIRTGNRCSSRALTRIYKPR*GFPVSW
Trigger: CCAACTTACAGGAAAACCCCATCTGGGCTTATATAT...TCTGGTCAATGCTCTGGATGAACACCTGTTCCCAGTCCGAATTGGGGACATGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CCA 90 bp CTTGACGTCTCTGTGTGCGAAGACATACGATTACAACTTCGATCCATAGCCTGTCAGGCTAGAGTGCAATaGCACCATCATAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: LDVSVCEDIRLQLRSIACQARVQ*HHHSSL
Trigger: CAGTGAGCTATGATGGTGCCATTGCACTCTAGCCTG...ACAGGCTATGGATCGAAGTTGTAATCGTATGTCTTCGCACACAGAGACGTCAAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp AGACTGGCAAGCAAAACTGGCCAGTCTTCAACCGTCCATTCTGAAGCATTGGTACTGCAATGTCATCCATaGAACGTTCTGGAAAACGAC +
Preference number: 4 (lower is better)
Translates to: RLASKTGQSSTVHSEALVLQCHP*NVLEND
Trigger: GTCGTTTTCCAGAACGTTTCATGGATGACATTGCAG...TACCAATGCTTCAGAATGGACGGTTGAAGACTGGCCAGTTTTGCTTGCCAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp GCCTGTGGTGGTTTTTCCAATGAGACTGGCAAGCAAAACTGGCCAGTCTTCAACATGCAAGGCTTGTATTaGGTCTCTCAACCATTTCTG +
Preference number: 4 (lower is better)
Translates to: ACGGFSNETGKQNWPVFNMQGLY*VSQPFL
Trigger: CAGAAATGGTTGAGAGACTCAATACAAGCCTTGCAT...GTTGAAGACTGGCCAGTTTTGCTTGCCAGTCTCATTGGAAAAACCACCACAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp ATTTCATGCCAGGTAGAGGAACCTCAGGAGACAGTACAGAATAAGCCTGTGGTGCATCAGGGTCTAAAATaGCAGCCAGCTCTGTTAACA +
Preference number: 4 (lower is better)
Translates to: ISCQVEEPQETVQNKPVVHQGLK*QPALLT
Trigger: TGTTAACAGAGCTGGCTGTCATTTTAGACCCTGATG...CACCACAGGCTTATTCTGTACTGTCTCCTGAGGTTCCTCTACCTGGCATGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCACTCGAGCCTTTATCTaGGGGTCAGAGTACCGCGGG +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTTRAFI*GSEYRG
Trigger: CCCGCGGTACTCTGACCCTCAGATAAAGGCTCGAGT...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCTTGCCTGCCACTCGTTaGCGTGAGGAGGAAACTGCC +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTLPATR*REEETA
Trigger: GGCAGTTTCCTCCTCACGTCAACGAGTGGCAGGCAA...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp ATGTCCCTGCGATTGCCATGGCAACGGTCTGGCTTATCATACTTCCGCTCTCACTGCTCTCATGTCTTTTaGTTTCTTAAAGGTCAAGCT +
Preference number: 4 (lower is better)
Translates to: MSLRLPWQRSGLSYFRSHCSHVF*FLKGQA
Trigger: AGCTTGACCTTTAAGAAATCAAAAGACATGAGAGCA...GTGAGAGCGGAAGTATGATAAGCCAGACCGTTGCCATGGCAATCGCAGGGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCGGAGGCACTGGCGTGTaGCCGTATTGTACCGATGCT +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTGGTGV*PYCTDA
Trigger: AGCATCGGTACAATACGGTCACACGCCAGTGCCTCC...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp TCAGTTTATCTAGCAGAAGATGAAGAAATCGGACCACTGGTTCCAGCTGGGATGACCAGATCCTGGACCTaGTCAGGAAATGTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: SVYLAEDEEIGPLVPAGMTRSWT*SGNVVS
Trigger: GGAAACAACATTTCCTGATCAGGTCCAGGATCTGGT...CATCCCAGCTGGAACCAGTGGTCCGATTTCTTCATCTTCTGCTAGATAAACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR GCA 90 bp GGTGCAGCTGGGGCTCGGCATGGCATTGCTTGGATCCTCTCCATACATAAACTGTTTTCTGATGACAATTaGCCAGTCTTCTGTATAACT +
Preference number: 4 (lower is better)
Translates to: GAAGARHGIAWILSIHKLFSDDN*PVFCIT
Trigger: AGTTATACAGAAGACTGGGCAATTGTCATCAGAAAA...CAGTTTATGTATGGAGAGGATCCAAGCAATGCCATGCCGAGCCCCAGCTGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614472.5
CDS-3UTR GCA 90 bp GAATTCCTCCTCTCTGACCAAGACCCTTTTCGTTCTCCAGTACTGATTTCTACTCATCCTGGTAGCTGTTaGCATCTGGAGCTTCATCAG +
Preference number: 4 (lower is better)
Translates to: EFLLSDQDPFRSPVLISTHPGSC*HLELHQ
Trigger: CTGATGAAGCTCCAGATGGCAACAGCTACCAGGATG...AGTAGAAATCAGTACTGGAGAACGAAAAGGGTCTTGGTCAGAGAGGAGGAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614472.5
CDS-3UTR GCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCAGGGACCGATGTCCCTaGGATTGCCATGGCAACGGT +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTRDRCP*DCHGNG
Trigger: ACCGTTGCCATGGCAATCGCAGGGACATCGGTCCCT...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTGTTCTGCTGATCTTCTaGGCGAAGGCGCGGCGCTCG +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLVLLIF*AKARRS
Trigger: CGAGCGCCGCGCCTTCGCCCAGAAGATCAGCAGAAC...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp CGCATGTCCCCAATTCGGACTGGGAACAGGTGTTCATCCAGAGCATTGACCAGACCATGTATATCCAACTaGTGTTTCAAGAGGAGTATT +
Preference number: 4 (lower is better)
Translates to: RMSPIRTGNRCSSRALTRPCISN*CFKRSI
Trigger: AATACTCCTCTTGAAACACCAGTTGGATATACATGG...TCTGGTCAATGCTCTGGATGAACACCTGTTCCCAGTCCGAATTGGGGACATGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634223.1
ENST00000637208.1
CDS-3UTR CCA 90 bp TCTAAGTTATTTTCCATGATTCGCATGTCCCCAATTCGGACTGGGAACAGGTGTACTGGCAAGCAAAACTaGCCAGTCTTCAACCGTCCA +
Preference number: 4 (lower is better)
Translates to: SKLFSMIRMSPIRTGNRCTGKQN*PVFNRP
Trigger: TGGACGGTTGAAGACTGGCCAGTTTTGCTTGCCAGT...ACACCTGTTCCCAGTCCGAATTGGGGACATGCGAATCATGGAAAATAACTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000634223.1
ENST00000637208.1
CDS-3UTR CCA 90 bp ATTTCATGCCAGGTAGAGGAACCTCAGGAGACAGTACAGAATAAGCCTGTGGTGGAGGTAGATACAACATaGCCACTCGAGCCTTTATCT +
Preference number: 4 (lower is better)
Translates to: ISCQVEEPQETVQNKPVVEVDTT*PLEPLS
Trigger: AGATAAAGGCTCGAGTGGCCATGTTGTATCTACCTC...CACCACAGGCTTATTCTGTACTGTCTCCTGAGGTTCCTCTACCTGGCATGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CCA 90 bp GTAGATAAACTGCACTTTGGTTACAGGCCATGCTGTGTAGTAGCACTTTTAGCAAAAGGCACTTCCAGATaGGCTTCTCTCGAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: VDKLHFGYRPCCVVALLAKGTSR*ASLELS
Trigger: GGACAGCTCGAGAGAAGCCCATCTGGAAGTGCCTTT...TGCTAAAAGTGCTACTACACAGCATGGCCTGTAACCAAAGTGCAGTTTATCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CCA 90 bp CATGTCCCCAATTCGGACTGGGAACAGGTGTTCATCCAGAGCATTGACCAGAGCGCACAACACCATACCTaGCCAATTTTTCTAATTTTC +
Preference number: 4 (lower is better)
Translates to: HVPNSDWEQVFIQSIDQSAQHHT*PIFLIF
Trigger: GAAAATTAGAAAAATTGGCCAGGTATGGTGTTGTGC...GCTCTGGTCAATGCTCTGGATGAACACCTGTTCCCAGTCCGAATTGGGGACATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CCA 90 bp TCTAAGTTATTTTCCATGATTCGCATGTCCCCAATTCGGACTGGGAACAGGTGTTGCCTCCCGAGTAGCTaGGAGTACATATGCACAACA +
Preference number: 4 (lower is better)
Translates to: SKLFSMIRMSPIRTGNRCCLPSS*EYICTT
Trigger: TGTTGTGCATATGTACTCCCAGCTACTCGGGAGGCA...ACACCTGTTCCCAGTCCGAATTGGGGACATGCGAATCATGGAAAATAACTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CCA 90 bp CTTGACGTCTCTGTGTGCGAAGACATACGATTACAACTTCGATCCATAGCCTGTTTTTGTTGCCCAGGCTaGAGCATAGTAGCATGGTCT +
Preference number: 4 (lower is better)
Translates to: LDVSVCEDIRLQLRSIACFCCPG*SIVAWS
Trigger: AGACCATGCTACTATGCTCCAGCCTGGGCAACAAAA...ACAGGCTATGGATCGAAGTTGTAATCGTATGTCTTCGCACACAGAGACGTCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp AGACTGGCAAGCAAAACTGGCCAGTCTTCAACCGTCCATTCTGAAGCATTGGTATTCAACCGTCCATTCTaGAGCATTGGTATCCATGTA +
Preference number: 4 (lower is better)
Translates to: RLASKTGQSSTVHSEALVFNRPF*SIGIHV
Trigger: TACATGGATACCAATGCTTCAGAATGGACGGTTGAA...TACCAATGCTTCAGAATGGACGGTTGAAGACTGGCCAGTTTTGCTTGCCAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634223.1
ENST00000637208.1
CDS-3UTR TCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCTGTGGCATAATGCACTaGTCCTCCCAAACCCCCAGG +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTCGIMH*SSQTPR
Trigger: CCTGGGGGTTTGGGAGGATCAGTGCATTATGCCACA...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp GTAGATAAACTGCACTTTGGTTACAGGCCATGCTGTGTAGTAGCACTTTTAGCAATCCATAGCCTGTGTTaGTTCTGCACTTGGACTGGG +
Preference number: 4 (lower is better)
Translates to: VDKLHFGYRPCCVVALLAIHSLC*FCTWTG
Trigger: CCCAGTCCAAGTGCAGAATCAACACAGGCTATGGAT...TGCTAAAAGTGCTACTACACAGCATGGCCTGTAACCAAAGTGCAGTTTATCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCGGCTTGTTGCAAAGCTaGTTCCCGAACGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTGLLQS*FPNAAT
Trigger: AGTGGCAGCGTTCGGGAATCAGCTTTGCAACAAGCC...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTCCAGGCCTTGTTAGTTaGGGGACCGATGTCCCTGCG +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLPGLVS*GTDVPA
Trigger: CGCAGGGACATCGGTCCCTCAACTAACAAGGCCTGG...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTTGCCACTCGTTGACGTaGGGAGGAAACTGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLCHSLT*GGNCQA
Trigger: GGCCTGGCAGTTTCCTCCTCACGTCAACGAGTGGCA...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp CATGTCCCCAATTCGGACTGGGAACAGGTGTTCATCCAGAGCATTGACCAGAGCTTTTCTGATGACAATTaGCCAGTCTTCTGTATAACT +
Preference number: 4 (lower is better)
Translates to: HVPNSDWEQVFIQSIDQSFSDDN*PVFCIT
Trigger: AGTTATACAGAAGACTGGGCAATTGTCATCAGAAAA...GCTCTGGTCAATGCTCTGGATGAACACCTGTTCCCAGTCCGAATTGGGGACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR GCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCCCGAACGCTGCCACTaGAAACAACCCACTGCAAAG +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTPERCH*KQPTAK
Trigger: CTTTGCAGTGGGTTGTTTGCAGTGGCAGCGTTCGGG...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp GTAGATAAACTGCACTTTGGTTACAGGCCATGCTGTGTAGTAGCACTTTTAGCAGAAAAGGTAGTGTGTTaGCTGCCACTCGTTGACGTG +
Preference number: 4 (lower is better)
Translates to: VDKLHFGYRPCCVVALLAEKVVC*LPLVDV
Trigger: CACGTCAACGAGTGGCAGGCAACACACTACCTTTTC...TGCTAAAAGTGCTACTACACAGCATGGCCTGTAACCAAAGTGCAGTTTATCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR GCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCGCCGTACCATTTCTTaGCTGGCACCTATGCTCCCA +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTRRTIS*LAPMLP
Trigger: TGGGAGCATAGGTGCCAGGCAAGAAATGGTACGGCG...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp TATTTTCCAGAGCAGATACCTTCTTCATCTGGAGATACCACATCATCTGAGACCTTGTACCGATGCTACTaGTACAGTGTCGGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: YFPEQIPSSSGDTTSSETLYRCY*YSVGEA
Trigger: GGCTTCTCCGACACTGTAGCAGTAGCATCGGTACAA...GGTCTCAGATGATGTGGTATCTCCAGATGAAGAAGGTATCTGCTCTGGAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR GCA 90 bp TCCGTAAAATCCCTCCAATCTGTGAGATATCTCTGCAAGTTTGGTTATTGCAGGCAACACGAAAATAGGTaGCAAACATCCGCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: SVKSLQSVRYLCKFGYCRQHENR*QTSAPS
Trigger: GCTGGGAGCGGATGTTTGGCACCTATTTTCGTGTTG...CCTGCAATAACCAAACTTGCAGAGATATCTCACAGATTGGAGGGATTTTACGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635088.1
CDS-3UTR GCA 90 bp AAACTGGCCAGTCTTCAACCGTCCATTCTGAAGCATTGGTATCCATGTATATCCTCATCCAGGCTAGAGTaGAATGGCACCATCATAGCT +
Preference number: 4 (lower is better)
Translates to: KLASLQPSILKHWYPCISSSRLE*NGTIIA
Trigger: AGCTATGATGGTGCCATTGCACTCTAGCCTGGATGA...GGATATACATGGATACCAATGCTTCAGAATGGACGGTTGAAGACTGGCCAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CCA 90 bp AGACTGGCAAGCAAAACTGGCCAGTCTTCAACCGTCCATTCTGAAGCATTGGTAATCTTCCAAATCCACTaGATCTACTGCTTCGGTAAG +
Preference number: 4 (lower is better)
Translates to: RLASKTGQSSTVHSEALVIFQIH*IYCFGK
Trigger: CTTACCGAAGCAGTAGATCCAGTGGATTTGGAAGAT...TACCAATGCTTCAGAATGGACGGTTGAAGACTGGCCAGTTTTGCTTGCCAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCATTCTGCACTTGGACTaGGGTTGGATCCCCATGGGG +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTILHLD*GWIPMG
Trigger: CCCCATGGGGATCCAACCCCAGTCCAAGTGCAGAAT...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp TCCCCAATTCGGACTGGGAACAGGTGTTCATCCAGAGCATTGACCAGAGCAAAAAGTGGCTATACAAATTaGTCTTCCTCGTTGATTGTG +
Preference number: 4 (lower is better)
Translates to: SPIRTGNRCSSRALTRAKSGYTN*SSSLIV
Trigger: CACAATCAACGAGGAAGACCAATTTGTATAGCCACT...TTTTGCTCTGGTCAATGCTCTGGATGAACACCTGTTCCCAGTCCGAATTGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CCA 90 bp TCCCCAATTCGGACTGGGAACAGGTGTTCATCCAGAGCATTGACCAGAGCAAAAAGGTCTGGTAACCCTTaGCAATTCTGTACATTAGAT +
Preference number: 4 (lower is better)
Translates to: SPIRTGNRCSSRALTRAKRSGNP*QFCTLD
Trigger: ATCTAATGTACAGAATTGCCAAGGGTTACCAGACCT...TTTTGCTCTGGTCAATGCTCTGGATGAACACCTGTTCCCAGTCCGAATTGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CCA 90 bp TCCCCAATTCGGACTGGGAACAGGTGTTCATCCAGAGCATTGACCAGAGCAAAAGGTTTTCCTGTAAGTTaGGGAGCAAGTTATCAATTC +
Preference number: 4 (lower is better)
Translates to: SPIRTGNRCSSRALTRAKGFPVS*GASYQF
Trigger: GAATTGATAACTTGCTCCCCAACTTACAGGAAAACC...TTTTGCTCTGGTCAATGCTCTGGATGAACACCTGTTCCCAGTCCGAATTGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CCA 90 bp TATTTTCCAGAGCAGATACCTTCTTCATCTGGAGATACCACATCATCTGAGACCCAGTGTTGCCCAGACTaGTTTCAAACTTCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: YFPEQIPSSSGDTTSSETQCCPD*FQTSGL
Trigger: GAGGCCTGAAGTTTGAAACCAGTCTGGGCAACACTG...GGTCTCAGATGATGTGGTATCTCCAGATGAAGAAGGTATCTGCTCTGGAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp AAACTGGCCAGTCTTCAACCGTCCATTCTGAAGCATTGGTATCCATGTATATCCTTCTTCAGGTACAGCTaGAACAAGAGTTCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: KLASLQPSILKHWYPCISFFRYS*NKSSAV
Trigger: GACTGCAGAACTCTTGTTTCAGCTGTACCTGAAGAA...GGATATACATGGATACCAATGCTTCAGAATGGACGGTTGAAGACTGGCCAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp TTAGGAACCCCTGCAGTAAAGCACTGGCATACAGATCAGTGGAATGGGATGGAGTTCTTTGTGACGGTTTaGTTTCCTTTGGTCATCATT +
Preference number: 4 (lower is better)
Translates to: LGTPAVKHWHTDQWNGMEFFVTV*FPLVII
Trigger: AATGATGACCAAAGGAAATCAAACCGTCACAAAGAA...CTCCATCCCATTCCACTGATCTGTATGCCAGTGCTTTACTGCAGGGGTTCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635827.1
CDS-3UTR TCA 90 bp TCTAAGTTATTTTCCATGATTCGCATGTCCCCAATTCGGACTGGGAACAGGTGTTGGTGGTTTTTCCAATaGGACTGGCAAGCAAAACTG +
Preference number: 4 (lower is better)
Translates to: SKLFSMIRMSPIRTGNRCWWFFQ*DWQAKL
Trigger: CAGTTTTGCTTGCCAGTCTCATTGGAAAAACCACCA...ACACCTGTTCCCAGTCCGAATTGGGGACATGCGAATCATGGAAAATAACTTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000634223.1
ENST00000637208.1
CDS-3UTR TCA 90 bp TCCCCAATTCGGACTGGGAACAGGTGTTCATCCAGAGCATTGACCAGAGCAAAAGTCCTTCTGAAATCGTaGAACTATATCACTAGCAAT +
Preference number: 4 (lower is better)
Translates to: SPIRTGNRCSSRALTRAKVLLKS*NYITSN
Trigger: ATTGCTAGTGATATAGTTTCACGATTTCAGAAGGAC...TTTTGCTCTGGTCAATGCTCTGGATGAACACCTGTTCCCAGTCCGAATTGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCGCGGGTCTGAGTCGTaGCTGGAGAGTAAATTGTGT +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTRGSES*LESKLC
Trigger: ACACAATTTACTCTCCAGTCACGACTCAGACCCGCG...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTACTCGAGCCTTTATCTaGGGGTCAGAGTACCGCGGG +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLTRAFI*GSEYRG
Trigger: CCCGCGGTACTCTGACCCTCAGATAAAGGCTCGAGT...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp AAGCATTGGTATCCATGTATATCCAACTGGTGTTTCAAGAGGAGTATTTTGTTTACTCGAGCCTTTATCTaGGGGTCAGAGTACCGCGGG +
Preference number: 4 (lower is better)
Translates to: KHWYPCISNWCFKRSILFTRAFI*GSEYRG
Trigger: CCCGCGGTACTCTGACCCTCAGATAAAGGCTCGAGT...AAACAAAATACTCCTCTTGAAACACCAGTTGGATATACATGGATACCAATGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp AACAACTTCAACATTAAAAACACCTTTGTGATTATCTACCCATTTCATGCCAGGTTGCCTGCCACTCGTTaGCGTGAGGAGGAAACTGCC +
Preference number: 4 (lower is better)
Translates to: NNFNIKNTFVIIYPFHARLPATR*REEETA
Trigger: GGCAGTTTCCTCCTCACGTCAACGAGTGGCAGGCAA...CCTGGCATGAAATGGGTAGATAATCACAAAGGTGTTTTTAATGTTGAAGTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTGGAGGCACTGGCGTGTaGCCGTATTGTACCGATGCT +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLGGTGV*PYCTDA
Trigger: AGCATCGGTACAATACGGTCACACGCCAGTGCCTCC...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp CATATTTGCAATCTTTTGGTCTTGTACATTCGTAGAAAATCCAGAACTCTGAGAGGAGGCACTGGCGTGTaGCCGTATTGTACCGATGCT +
Preference number: 4 (lower is better)
Translates to: HICNLLVLYIRRKSRTLRGGTGV*PYCTDA
Trigger: AGCATCGGTACAATACGGTCACACGCCAGTGCCTCC...TCTCAGAGTTCTGGATTTTCTACGAATGTACAAGACCAAAAGATTGCAAATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp TATTTTCCAGAGCAGATACCTTCTTCATCTGGAGATACCACATCATCTGAGACCATGATTGCTTCGTTCTaGGTGCTTGCCTGCCATGTT +
Preference number: 4 (lower is better)
Translates to: YFPEQIPSSSGDTTSSETMIASF*VLACHV
Trigger: AACATGGCAGGCAAGCACTCAGAACGAAGCAATCAT...GGTCTCAGATGATGTGGTATCTCCAGATGAAGAAGGTATCTGCTCTGGAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCACTTCCAAAGGCCCCTaGTTCACTGTGGTGCCTACA +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTTSKGP*FTVVPT
Trigger: TGTAGGCACCACAGTGAATCAGGGGCCTTTGGAAGT...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCGAAGGCTCATTCGACTaGAGGAATCTCTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTEGSFD*RNLCGR
Trigger: CCTGCCACAGAGATTCCTTCAGTCGAATGAGCCTTC...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp GCCTGTGGTGGTTTTTCCAATGAGACTGGCAAGCAAAACTGGCCAGTCTTCAACCTCCCGAAAGGTTCATaGTTTATTATTTTGCATGGT +
Preference number: 4 (lower is better)
Translates to: ACGGFSNETGKQNWPVFNLPKGS*FIILHG
Trigger: ACCATGCAAAATAATAAATCATGAACCTTTCGGGAG...GTTGAAGACTGGCCAGTTTTGCTTGCCAGTCTCATTGGAAAAACCACCACAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR GCA 90 bp AGACTGGCAAGCAAAACTGGCCAGTCTTCAACCGTCCATTCTGAAGCATTGGTATTGGCAAAACTGATCTaGTTGACTCTTCAGTTTCTC +
Preference number: 4 (lower is better)
Translates to: RLASKTGQSSTVHSEALVLAKLI*LTLQFL
Trigger: GAGAAACTGAAGAGTCAAGCAGATCAGTTTTGCCAA...TACCAATGCTTCAGAATGGACGGTTGAAGACTGGCCAGTTTTGCTTGCCAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR GCA 90 bp CAATCTCTGCTCTTGATTTGTCAAGCTTCTCTGTGTTTTGACGCCAGTGAGTCATATCTACCCATTTCATaGCAGGTAGAGGAACCTCAG +
Preference number: 4 (lower is better)
Translates to: QSLLLICQASLCFDASESYLPIS*QVEEPQ
Trigger: CTGAGGTTCCTCTACCTGGCATGAAATGGGTAGATA...TGACTCACTGGCGTCAAAACACAGAGAAGCTTGACAAATCAAGAGCAGAGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR GCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTCGATGTCCCTGCGATTaGCATGGCAACGGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLRCPCD*HGNGLA
Trigger: AGCCAGACCGTTGCCATGGCAATCGCAGGGACATCG...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp AACAACTTCAACATTAAAAACACCTTTGTGATTATCTACCCATTTCATGCCAGGCGATGTCCCTGCGATTaGCATGGCAACGGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: NNFNIKNTFVIIYPFHARRCPCD*HGNGLA
Trigger: AGCCAGACCGTTGCCATGGCAATCGCAGGGACATCG...CCTGGCATGAAATGGGTAGATAATCACAAAGGTGTTTTTAATGTTGAAGTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR GCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTAGGGACCGATGTCCCTaGGATTGCCATGGCAACGGT +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLRDRCP*DCHGNG
Trigger: ACCGTTGCCATGGCAATCGCAGGGACATCGGTCCCT...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp GCCTGTGGTGGTTTTTCCAATGAGACTGGCAAGCAAAACTGGCCAGTCTTCAACTCCATTCTGAAGCATTaGTATCCATGTATATCCAAC +
Preference number: 4 (lower is better)
Translates to: ACGGFSNETGKQNWPVFNSILKH*YPCISN
Trigger: GTTGGATATACATGGATACCAATGCTTCAGAATGGA...GTTGAAGACTGGCCAGTTTTGCTTGCCAGTCTCATTGGAAAAACCACCACAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000634223.1
ENST00000637208.1
CDS-3UTR CCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCGTCCCCAATTCGGACTaGGAACAGGTGTTCATCCAG +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTVPNSD*EQVFIQ
Trigger: CTGGATGAACACCTGTTCCCAGTCCGAATTGGGGAC...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp TCCCCAATTCGGACTGGGAACAGGTGTTCATCCAGAGCATTGACCAGAGCAAAAAGTCCCAGATATATCTaGATTGCTATTACTAAGGCT +
Preference number: 4 (lower is better)
Translates to: SPIRTGNRCSSRALTRAKSPRYI*IAITKA
Trigger: AGCCTTAGTAATAGCAATCCAGATATATCTGGGACT...TTTTGCTCTGGTCAATGCTCTGGATGAACACCTGTTCCCAGTCCGAATTGGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCCATGGGGCAGCTTTTaGACCACCAGTGTTAACCCA +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTPWGSF*TTSVNP
Trigger: TGGGTTAACACTGGTGGTCCAAAAGCTGCCCCATGG...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp TCAGTTTATCTAGCAGAAGATGAAGAAATCGGACCACTGGTTCCAGCTGGGATGAGGACACCAGAACACTaGGATTCGGTAATGAGTAAA +
Preference number: 4 (lower is better)
Translates to: SVYLAEDEEIGPLVPAGMRTPEH*DSVMSK
Trigger: TTTACTCATTACCGAATCCCAGTGTTCTGGTGTCCT...CATCCCAGCTGGAACCAGTGGTCCGATTTCTTCATCTTCTGCTAGATAAACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCGCCATGGCAACGGTCTaGCTTATCATACTTCCGCTC +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTAMATV*LIILPL
Trigger: GAGCGGAAGTATGATAAGCCAGACCGTTGCCATGGC...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCTCCCTGCGATTGCCATaGCAACGGTCTGGCTTATCA +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTSLRLP*QRSGLS
Trigger: TGATAAGCCAGACCGTTGCCATGGCAATCGCAGGGA...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCAAAGGCACTTCCAGATaGGCTTCTCTCGAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTKGTSR*ASLELS
Trigger: GGACAGCTCGAGAGAAGCCCATCTGGAAGTGCCTTT...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251157.10
ENST00000454575.6
CDS-3UTR CCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCGGTAAAGGGAGGCACTaGCGTGTGACCGTATTGTAC +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTGKGRH*RVTVLY
Trigger: GTACAATACGGTCACACGCCAGTGCCTCCCTTTACC...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
3UTR CAA 72 bp GTCGAAAGCTCGTCAAGTTACAAGCATCATCTCCACTaGTTGTCCTTTCAAGTGATCGTCTGCCAACAATAC +
Preference number: 4 (lower is better)
Translates to: VESSSSYKHHLH*LSFQVIVCQQY
Trigger: GTATTGTTGGCAGACGATCACTTGAAAGGACAACAAGTGGAGATGATGCTTGTAACTTGACGAGCTTTCGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614472.5
3UTR CAA 72 bp GAACCTTCACACACTAGTGGAATGCTAGTGGAATTTTaGAAGGTGCAGCCAAATTGGAAAACAGTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: EPSHTSGMLVEF*KVQPNWKTVWQ
Trigger: CTGCCACACTGTTTTCCAATTTGGCTGCACCTTCAAAAATTCCACTAGCATTCCACTAGTGTGTGAAGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635827.1
CDS-3UTR TCA 90 bp TGGCAAGCAAAACTGGCCAGTCTTCAACCGTCCATTCTGAAGCATTGGTATCCATTCTTTGTGACGGTTTaGTTTCCTTTGGTCATCATT +
Preference number: 4 (lower is better)
Translates to: WQAKLASLQPSILKHWYPFFVTV*FPLVII
Trigger: AATGATGACCAAAGGAAATCAAACCGTCACAAAGAA...TGGATACCAATGCTTCAGAATGGACGGTTGAAGACTGGCCAGTTTTGCTTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp GCAAGCAAAACTGGCCAGTCTTCAACCGTCCATTCTGAAGCATTGGTATCCATGTTTCTAGCAGAACCTTaGCGATTGGCAAAATTAAGA +
Preference number: 4 (lower is better)
Translates to: ASKTGQSSTVHSEALVSMFLAEP*RLAKLR
Trigger: TCTTAATTTTGCCAATCGTCAAGGTTCTGCTAGAAA...CATGGATACCAATGCTTCAGAATGGACGGTTGAAGACTGGCCAGTTTTGCTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000634223.1
ENST00000637208.1
CDS-3UTR TCA 90 bp AAACTGGCCAGTCTTCAACCGTCCATTCTGAAGCATTGGTATCCATGTATATCCTTATCTAGCAGAAGATaGAGAAATCGGACCACTGGT +
Preference number: 4 (lower is better)
Translates to: KLASLQPSILKHWYPCISLSSRR*RNRTTG
Trigger: ACCAGTGGTCCGATTTCTTCATCTTCTGCTAGATAA...GGATATACATGGATACCAATGCTTCAGAATGGACGGTTGAAGACTGGCCAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634223.1
ENST00000637208.1
CDS-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTTGTGGCATAATGCACTaGTCCTCCCAAACCCCCAGG +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLCGIMH*SSQTPR
Trigger: CCTGGGGGTTTGGGAGGATCAGTGCATTATGCCACA...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCATCCATAGCCTGTGTTaGTTCTGCACTTGGACTGGG +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTIHSLC*FCTWTG
Trigger: CCCAGTCCAAGTGCAGAATCAACACAGGCTATGGAT...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCAGTGTCGGAGAAGCCTaGGGCATAAATCAGCACACT +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTSVGEA*GINQHT
Trigger: AGTGTGCTGATTTATGCCTCAGGCTTCTCCGACACT...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp ATTTCATGCCAGGTAGAGGAACCTCAGGAGACAGTACAGAATAAGCCTGTGGTGTCCCGATTAGCTTCATaGATAGGAATAAGTACTTTG +
Preference number: 4 (lower is better)
Translates to: ISCQVEEPQETVQNKPVVSRLAS*IGISTL
Trigger: CAAAGTACTTATTCCTATTCATGAAGCTAATCGGGA...CACCACAGGCTTATTCTGTACTGTCTCCTGAGGTTCCTCTACCTGGCATGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTGGGTCTGCGGGATCCTaGTGTGTTGCAAATGCCAAC +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLGSAGS*CVANAN
Trigger: GTTGGCATTTGCAACACATCAGGATCCCGCAGACCC...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCAATCTCTGTGGCAGGTaGCAGGCAATACTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTNLCGR*QAILPC
Trigger: ACAAGGCAGTATTGCCTGTCACCTGCCACAGAGATT...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp TCCATGTATATCCAACTGGTGTTTCAAGAGGAGTATTTTGTTTTTGTTGACAACGGTGGGAAGATCACCTaGACTCAGGAGGTGTCAAGG +
Preference number: 4 (lower is better)
Translates to: SMYIQLVFQEEYFVFVDNGGKIT*TQEVSR
Trigger: CCTTGACACCTCCTGAGTTCAGGTGATCTTCCCACC...GTTGTCAACAAAAACAAAATACTCCTCTTGAAACACCAGTTGGATATACATGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR GCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTCCTAACTTCGGCTaGCACCGTTCTGCTGATCTT +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTLPNFG*HRSADL
Trigger: AAGATCAGCAGAACGGTGGCAGCCGAAGTTAGGAAG...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCTATTGTCCGGAGATCTaGTTCCTAACTTCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTYCPEI*FLTSAA
Trigger: GGCAGCCGAAGTTAGGAAGCAGATCTCCGGACAATA...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCATCCACTGGATCTACTaGTTCGGTAAGGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTIHWIY*FGKGHC
Trigger: ACAGTGCCCCTTACCGAAGCAGTAGATCCAGTGGAT...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCATCCTGGTAGCTGTTaGCATCTGGAGCTTCATCAG +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTHPGSC*HLELHQ
Trigger: CTGATGAAGCTCCAGATGGCAACAGCTACCAGGATG...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp GAGAGTAGCTGGTCGAAAGCTCGTCAAGTTACAAGCATCATCTCCACTTGTTGTTTGGCAAAACTGATCTaGTTGACTCTTCAGTTTCTC +
Preference number: 4 (lower is better)
Translates to: ESSWSKARQVTSIISTCCLAKLI*LTLQFL
Trigger: GAGAAACTGAAGAGTCAAGCAGATCAGTTTTGCCAA...ACAACAAGTGGAGATGATGCTTGTAACTTGACGAGCTTTCGACCAGCTACTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614472.5
CDS-3UTR GCA 90 bp CAACCGTCCATTCTGAAGCATTGGTATCCATGTATATCCAACTGGTGTTTCAAGTATCTACCCATTTCATaGCAGGTAGAGGAACCTCAG +
Preference number: 4 (lower is better)
Translates to: QPSILKHWYPCISNWCFKYLPIS*QVEEPQ
Trigger: CTGAGGTTCCTCTACCTGGCATGAAATGGGTAGATA...CTTGAAACACCAGTTGGATATACATGGATACCAATGCTTCAGAATGGACGGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634223.1
ENST00000637208.1
CDS-3UTR GCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTCCCGAACGCTGCCACTaGAAACAACCCACTGCAAAG +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLPERCH*KQPTAK
Trigger: CTTTGCAGTGGGTTGTTTGCAGTGGCAGCGTTCGGG...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCGAAAAGGTAGTGTGTTaGCTGCCACTCGTTGACGTG +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTEKVVC*LPLVDV
Trigger: CACGTCAACGAGTGGCAGGCAACACACTACCTTTTC...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTCGCCGTACCATTTCTTaGCTGGCACCTATGCTCCCA +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLRRTIS*LAPMLP
Trigger: TGGGAGCATAGGTGCCAGGCAAGAAATGGTACGGCG...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCTTGTACCGATGCTACTaGTACAGTGTCGGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTLYRCY*YSVGEA
Trigger: GGCTTCTCCGACACTGTAGCAGTAGCATCGGTACAA...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCTTCGTTCTGAGTGCTTaGCTGCCATGTTCTGCAACC +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTFVLSA*LPCSAT
Trigger: GGTTGCAGAACATGGCAGGCAAGCACTCAGAACGAA...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp AGACTGGCAAGCAAAACTGGCCAGTCTTCAACCGTCCATTCTGAAGCATTGGTAGTAAACTTCATTAACTaGTTCATACATGCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: RLASKTGQSSTVHSEALVVNFIN*FIHASH
Trigger: ATGGCTGGCATGTATGAAGCAGTTAATGAAGTTTAC...TACCAATGCTTCAGAATGGACGGTTGAAGACTGGCCAGTTTTGCTTGCCAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR GCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCAACACGAAAATAGGTaGCAAACATCCGCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTQHENR*QTSAPS
Trigger: GCTGGGAGCGGATGTTTGGCACCTATTTTCGTGTTG...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251157.10
ENST00000635253.2
CDS-3UTR GCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCCTGATTCACTGTGGTaGCTACAGATCCCTGGAGTA +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTPDSLW*LQIPGV
Trigger: TACTCCAGGGATCTGTAGGCACCACAGTGAATCAGG...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp TCTAAGTTATTTTCCATGATTCGCATGTCCCCAATTCGGACTGGGAACAGGTGTATGAGATCTCAGTGTTaGCCAGACTGGTTTCAAACT +
Preference number: 4 (lower is better)
Translates to: SKLFSMIRMSPIRTGNRCMRSQC*PDWFQT
Trigger: AGTTTGAAACCAGTCTGGGCAACACTGAGATCTCAT...ACACCTGTTCCCAGTCCGAATTGGGGACATGCGAATCATGGAAAATAACTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CCA 90 bp TTCAATGTCAGCCCTATCAAAATCCCAGATGCCTTTGTGCACAAACTGACAGCTGTAGCTGTTGCCATCTaGAGCTTCATCAGATTCAAA +
Preference number: 4 (lower is better)
Translates to: FNVSPIKIPDAFVHKLTAVAVAI*SFIRFK
Trigger: TTTGAATCTGATGAAGCTCCAGATGGCAACAGCTAC...AGCTGTCAGTTTGTGCACAAAGGCATCTGGGATTTTGATAGGGCTGACATTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635827.1
CDS-3UTR CCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCACTGGCAAGCAAAACTaGCCAGTCTTCAACCGTCCA +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTTGKQN*PVFNRP
Trigger: TGGACGGTTGAAGACTGGCCAGTTTTGCTTGCCAGT...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTATTCTGCACTTGGACTaGGGTTGGATCCCCATGGGG +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLILHLD*GWIPMG
Trigger: CCCCATGGGGATCCAACCCCAGTCCAAGTGCAGAAT...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp GCCTGTGGTGGTTTTTCCAATGAGACTGGCAAGCAAAACTGGCCAGTCTTCAACTCAGAAAGAATCATATaGAGATTGAAAACCAGATCC +
Preference number: 4 (lower is better)
Translates to: ACGGFSNETGKQNWPVFNSERII*RLKTRS
Trigger: GGATCTGGTTTTCAATCTCCATATGATTCTTTCTGA...GTTGAAGACTGGCCAGTTTTGCTTGCCAGTCTCATTGGAAAAACCACCACAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCGGTCAATCGCAGATCTaGAGAGGTCTGGTAACCCTT +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTGQSQI*RGLVTL
Trigger: AAGGGTTACCAGACCTCTCCAGATCTGCGATTGACC...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCACAAGTGCTGCTGAGTaGACTAGACACTGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTTSAAE*TRHCAA
Trigger: AGCTGCACAGTGTCTAGTCCACTCAGCAGCACTTGT...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCCATCTGAAGCATTTTaGGGTCTGCGGGATCCTGAT +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTPSEAF*GLRDPD
Trigger: ATCAGGATCCCGCAGACCCCAAAATGCTTCAGATGG...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp TCCATGTATATCCAACTGGTGTTTCAAGAGGAGTATTTTGTTTTTGTTGACAACGGCAGGTGGATTGCTTaGGGCCAGGAGTTTGAGATC +
Preference number: 4 (lower is better)
Translates to: SMYIQLVFQEEYFVFVDNGRWIA*GQEFEI
Trigger: GATCTCAAACTCCTGGCCCCAAGCAATCCACCTGCC...GTTGTCAACAAAAACAAAATACTCCTCTTGAAACACCAGTTGGATATACATGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp ACTAGTGGAATGCTAGTGGAATTTTTGAAGGTGCAGCCAAATTGGAAAACAGTGTTCTTCAGGTACAGCTaGAACAAGAGTTCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: TSGMLVEFLKVQPNWKTVFFRYS*NKSSAV
Trigger: GACTGCAGAACTCTTGTTTCAGCTGTACCTGAAGAA...CACTGTTTTCCAATTTGGCTGCACCTTCAAAAATTCCACTAGCATTCCACTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635827.1
CDS-3UTR TCA 90 bp TATTTTCCAGAGCAGATACCTTCTTCATCTGGAGATACCACATCATCTGAGACCTTCTTCCTCATCTGGTaGTGGATGCAAAGCAAAAAG +
Preference number: 4 (lower is better)
Translates to: YFPEQIPSSSGDTTSSETFFLIW*WMQSKK
Trigger: CTTTTTGCTTTGCATCCATCACCAGATGAGGAAGAA...GGTCTCAGATGATGTGGTATCTCCAGATGAAGAAGGTATCTGCTCTGGAAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp CTTGACGTCTCTGTGTGCGAAGACATACGATTACAACTTCGATCCATAGCCTGTTTTCTAGCAGAACCTTaGCGATTGGCAAAATTAAGA +
Preference number: 4 (lower is better)
Translates to: LDVSVCEDIRLQLRSIACFLAEP*RLAKLR
Trigger: TCTTAATTTTGCCAATCGTCAAGGTTCTGCTAGAAA...ACAGGCTATGGATCGAAGTTGTAATCGTATGTCTTCGCACACAGAGACGTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp AAAGTATCAGTTTATCTAGCAGAAGATGAAGAAATCGGACCACTGGTTCCAGCTTGGTGGTTTTTCCAATaGGACTGGCAAGCAAAACTG +
Preference number: 4 (lower is better)
Translates to: KVSVYLAEDEEIGPLVPAWWFFQ*DWQAKL
Trigger: CAGTTTTGCTTGCCAGTCTCATTGGAAAAACCACCA...AGCTGGAACCAGTGGTCCGATTTCTTCATCTTCTGCTAGATAAACTGATACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000634223.1
ENST00000637208.1
CDS-3UTR TCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCAACTTCATCATCTGGTaGCGTGGGAGTCCCAGATAT +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTNFIIW*RGSPRY
Trigger: ATATCTGGGACTCCCACGTCACCAGATGATGAAGTT...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp GTAGATAAACTGCACTTTGGTTACAGGCCATGCTGTGTAGTAGCACTTTTAGCAAAAGCCAGCTCCTCGTaGAAAAGCTTTTTAGTTGGT +
Preference number: 4 (lower is better)
Translates to: VDKLHFGYRPCCVVALLAKASSS*KSFLVG
Trigger: ACCAACTAAAAAGCTTTTTCACGAGGAGCTGGCTTT...TGCTAAAAGTGCTACTACACAGCATGGCCTGTAACCAAAGTGCAGTTTATCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp GTAGATAAACTGCACTTTGGTTACAGGCCATGCTGTGTAGTAGCACTTTTAGCATCTTCATTAAAATTCTaGGATGTGCCCACCAAGGAG +
Preference number: 4 (lower is better)
Translates to: VDKLHFGYRPCCVVALLASSLKF*DVPTKE
Trigger: CTCCTTGGTGGGCACATCTCAGAATTTTAATGAAGA...TGCTAAAAGTGCTACTACACAGCATGGCCTGTAACCAAAGTGCAGTTTATCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCACCAGATCCTGGACCTaGTCAGGAAATGTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTTRSWT*SGNVVS
Trigger: GGAAACAACATTTCCTGATCAGGTCCAGGATCTGGT...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp TATTTTCCAGAGCAGATACCTTCTTCATCTGGAGATACCACATCATCTGAGACCGAATCATATGGAGATTaGAAACCAGATCCTGGACCT +
Preference number: 4 (lower is better)
Translates to: YFPEQIPSSSGDTTSSETESYGD*KPDPGP
Trigger: AGGTCCAGGATCTGGTTTTCAATCTCCATATGATTC...GGTCTCAGATGATGTGGTATCTCCAGATGAAGAAGGTATCTGCTCTGGAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCATGATTGCTTCGTTCTaGGTGCTTGCCTGCCATGTT +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTMIASF*VLACHV
Trigger: AACATGGCAGGCAAGCACTCAGAACGAAGCAATCAT...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp CGTAAAATCCCTCCAATCTGTGAGATATCTCTGCAAGTTTGGTTATTGCAGGCTAATCCCTCCAATCTGTaGGATATCTCTGCAAGTTTG +
Preference number: 4 (lower is better)
Translates to: RKIPPICEISLQVWLLQANPSNL*DISASL
Trigger: CAAACTTGCAGAGATATCTCACAGATTGGAGGGATT...AGCCTGCAATAACCAAACTTGCAGAGATATCTCACAGATTGGAGGGATTTTACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635088.1
CDS-3UTR TCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTTTGAATTGTTCATaGAGTTCCCCATGGGCACGG +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTLLNCS*SSPWAR
Trigger: CCGTGCCCATGGGGAACTTCATGAACAATTCAAAAG...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTACTTCCAAAGGCCCCTaGTTCACTGTGGTGCCTACA +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLTSKGP*FTVVPT
Trigger: TGTAGGCACCACAGTGAATCAGGGGCCTTTGGAAGT...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTGAGGGATCTTTCTGTTaGTCAGTGGCTGTAGGGCCT +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLEGSFC*SVAVGP
Trigger: AGGCCCTACAGCCACTGATCAACAGAAAGATCCCTC...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTGAAGGCTCATTCGACTaGAGGAATCTCTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLEGSFD*RNLCGR
Trigger: CCTGCCACAGAGATTCCTTCAGTCGAATGAGCCTTC...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp TTCAATGTCAGCCCTATCAAAATCCCAGATGCCTTTGTGCACAAACTGACAGCTTACCATCAAGAAAAGTaGACTCACAGACTAGGAGAA +
Preference number: 4 (lower is better)
Translates to: FNVSPIKIPDAFVHKLTAYHQEK*THRLGE
Trigger: TTCTCCTAGTCTGTGAGTTCACTTTTCTTGATGGTA...AGCTGTCAGTTTGTGCACAAAGGCATCTGGGATTTTGATAGGGCTGACATTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635827.1
CDS-3UTR GCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCTTACCGGCATGGCATTaGTTGGATCCTCTCCATACA +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTLPAWH*LDPLHT
Trigger: TGTATGGAGAGGATCCAAGCAATGCCATGCCGGTAA...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCAAGAACCAGGCTTGTTaGAAAGCTGATTCCCGAACG +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTKNQAC*KADSRT
Trigger: CGTTCGGGAATCAGCTTTGCAACAAGCCTGGTTCTT...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCACCGTATTGTACCGATaGTACTGCTACAGTGTCGGA +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTTVLYR*YCYSVG
Trigger: TCCGACACTGTAGCAGTAGCATCGGTACAATACGGT...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp TCTAAGTTATTTTCCATGATTCGCATGTCCCCAATTCGGACTGGGAACAGGTGTAGTGACATTGTTACCTaGATTTTAACCCTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: SKLFSMIRMSPIRTGNRCSDIVT*ILTLAK
Trigger: CTTTGCCAGGGTTAAAATGCAGGTAACAATGTCACT...ACACCTGTTCCCAGTCCGAATTGGGGACATGCGAATCATGGAAAATAACTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR GCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCAGCTTCAGCATGATTaGTTCGTTCTGAGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTQLQHD*FVLSAC
Trigger: GCAAGCACTCAGAACGAAGCAATCATGCTGAAGCTG...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCGGGATCCTGATGTGTTaGAAATGCCAACTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTGILMC*KCQLLC
Trigger: ACACAGGAGTTGGCATTTGCAACACATCAGGATCCC...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp TCTAAGTTATTTTCCATGATTCGCATGTCCCCAATTCGGACTGGGAACAGGTGTAGAGCCTTTCTACAATaGACAGATTATCCTTACTGG +
Preference number: 4 (lower is better)
Translates to: SKLFSMIRMSPIRTGNRCRAFLQ*TDYPYW
Trigger: CCAGTAAGGATAATCTGTGCATTGTAGAAAGGCTCT...ACACCTGTTCCCAGTCCGAATTGGGGACATGCGAATCATGGAAAATAACTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCACTGTGAGAGTAGCTaGTCGAAAGCTCGTCAAGTT +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTHCESS*SKARQV
Trigger: AACTTGACGAGCTTTCGACCAGCTACTCTCACAGTG...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp GTATCAGTTTATCTAGCAGAAGATGAAGAAATCGGACCACTGGTTCCAGCTGGGTCCATTCTGAAGCATTaGTATCCATGTATATCCAAC +
Preference number: 4 (lower is better)
Translates to: VSVYLAEDEEIGPLVPAGSILKH*YPCISN
Trigger: GTTGGATATACATGGATACCAATGCTTCAGAATGGA...CCCAGCTGGAACCAGTGGTCCGATTTCTTCATCTTCTGCTAGATAAACTGATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634223.1
ENST00000637208.1
CDS-3UTR CCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTGTCCCCAATTCGGACTaGGAACAGGTGTTCATCCAG +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLVPNSD*EQVFIQ
Trigger: CTGGATGAACACCTGTTCCCAGTCCGAATTGGGGAC...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTCCATGGGGCAGCTTTTaGACCACCAGTGTTAACCCA +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLPWGSF*TTSVNP
Trigger: TGGGTTAACACTGGTGGTCCAAAAGCTGCCCCATGG...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTTCCCTGCGATTGCCATaGCAACGGTCTGGCTTATCA +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLSLRLP*QRSGLS
Trigger: TGATAAGCCAGACCGTTGCCATGGCAATCGCAGGGA...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCGTACCATTTCTTGCCTaGCACCTATGCTCCCAAGAA +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTVPFLA*HLCSQE
Trigger: TTCTTGGGAGCATAGGTGCCAGGCAAGAAATGGTAC...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTAAAGGCACTTCCAGATaGGCTTCTCTCGAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLKGTSR*ASLELS
Trigger: GGACAGCTCGAGAGAAGCCCATCTGGAAGTGCCTTT...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251157.10
ENST00000454575.6
CDS-3UTR CCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTGGTAAAGGGAGGCACTaGCGTGTGACCGTATTGTAC +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLGKGRH*RVTVLY
Trigger: GTACAATACGGTCACACGCCAGTGCCTCCCTTTACC...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp CGTAAAATCCCTCCAATCTGTGAGATATCTCTGCAAGTTTGGTTATTGCAGGCTCCAAATCCCCGAACTTaGTTCCATAAAAACCAACAC +
Preference number: 4 (lower is better)
Translates to: RKIPPICEISLQVWLLQAPNPRT*FHKNQH
Trigger: GTGTTGGTTTTTATGGAACCAAGTTCGGGGATTTGG...AGCCTGCAATAACCAAACTTGCAGAGATATCTCACAGATTGGAGGGATTTTACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635088.1
CDS-3UTR CCA 90 bp CAATCTCTGCTCTTGATTTGTCAAGCTTCTCTGTGTTTTGACGCCAGTGAGTCAACTGAGCCAGAACTATaGCCAGTATTTCTGAACATA +
Preference number: 4 (lower is better)
Translates to: QSLLLICQASLCFDASESTEPEL*PVFLNI
Trigger: TATGTTCAGAAATACTGGCCATAGTTCTGGCTCAGT...TGACTCACTGGCGTCAAAACACAGAGAAGCTTGACAAATCAAGAGCAGAGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCTTCTTCAGGTACAGCTaGAACAAGAGTTCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTFFRYS*NKSSAV
Trigger: GACTGCAGAACTCTTGTTTCAGCTGTACCTGAAGAA...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp GTCGCCGTAAGACAGAAGATGGCCTTCTCATATCAGCAAGGAATTTGTAGAGATTTCTTTGTGACGGTTTaGTTTCCTTTGGTCATCATT +
Preference number: 4 (lower is better)
Translates to: VAVRQKMAFSYQQGICRDFFVTV*FPLVII
Trigger: AATGATGACCAAAGGAAATCAAACCGTCACAAAGAA...ATCTCTACAAATTCCTTGCTGATATGAGAAGGCCATCTTCTGTCTTACGGCGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614472.5
CDS-3UTR TCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCTGGTGGTTTTTCCAATaGGACTGGCAAGCAAAACTG +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTWWFFQ*DWQAKL
Trigger: CAGTTTTGCTTGCCAGTCTCATTGGAAAAACCACCA...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTGCCATGCTGGTCATaGTTTCCTTCCAAGTTTTTG +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTLPCWS*FPSKFL
Trigger: CAAAAACTTGGAAGGAAATCATGACCAGCATGGCAG...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTATCCATAGCCTGTGTTaGTTCTGCACTTGGACTGGG +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLIHSLC*FCTWTG
Trigger: CCCAGTCCAAGTGCAGAATCAACACAGGCTATGGAT...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTGCAATGTCATCCATaGAACGTTCTGGAAAACGAC +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTLQCHP*NVLEND
Trigger: GTCGTTTTCCAGAACGTTTCATGGATGACATTGCAG...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCATCAGGGTCTAAAATaGCAGCCAGCTCTGTTAACA +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTHQGLK*QPALLT
Trigger: TGTTAACAGAGCTGGCTGTCATTTTAGACCCTGATG...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCGAGTTCAGGAAACTTTaGAACCAAGGCTCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTEFRKL*NQGSLC
Trigger: ACACAGAGAGCCTTGGTTTCAAAGTTTCCTGAACTC...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTAGTGTCGGAGAAGCCTaGGGCATAAATCAGCACACT +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLSVGEA*GINQHT
Trigger: AGTGTGCTGATTTATGCCTCAGGCTTCTCCGACACT...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp TCCATGTATATCCAACTGGTGTTTCAAGAGGAGTATTTTGTTTTTGTTGACAACAGTGTCGGAGAAGCCTaGGGCATAAATCAGCACACT +
Preference number: 4 (lower is better)
Translates to: SMYIQLVFQEEYFVFVDNSVGEA*GINQHT
Trigger: AGTGTGCTGATTTATGCCTCAGGCTTCTCCGACACT...GTTGTCAACAAAAACAAAATACTCCTCTTGAAACACCAGTTGGATATACATGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp CTTGTTGTCCTTTCAAGTGATCGTCTGCCAACAATACTAGAATTCCTCCTCTCTATGGAAGCCCAAGCCTaGGAACTTTATTACAAGAAA +
Preference number: 4 (lower is better)
Translates to: LVVLSSDRLPTILEFLLSMEAQA*ELYYKK
Trigger: TTTCTTGTAATAAAGTTCTCAGGCTTGGGCTTCCAT...AGAGAGGAGGAATTCTAGTATTGTTGGCAGACGATCACTTGAAAGGACAACAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614472.5
CDS-3UTR TCA 90 bp ACTAGTGGAATGCTAGTGGAATTTTTGAAGGTGCAGCCAAATTGGAAAACAGTGCTGGTAAAGATATGCTaGAACTGGAACCTTCACACA +
Preference number: 4 (lower is better)
Translates to: TSGMLVEFLKVQPNWKTVLVKIC*NWNLHT
Trigger: TGTGTGAAGGTTCCAGTTTCAGCATATCTTTACCAG...CACTGTTTTCCAATTTGGCTGCACCTTCAAAAATTCCACTAGCATTCCACTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635827.1
CDS-3UTR TCA 90 bp TATTTTCCAGAGCAGATACCTTCTTCATCTGGAGATACCACATCATCTGAGACCTGGACTTCAATCCAGTaGAAGATCTACCAGAATACT +
Preference number: 4 (lower is better)
Translates to: YFPEQIPSSSGDTTSSETWTSIQ*KIYQNT
Trigger: AGTATTCTGGTAGATCTTTCACTGGATTGAAGTCCA...GGTCTCAGATGATGTGGTATCTCCAGATGAAGAAGGTATCTGCTCTGGAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp AAAGTATCAGTTTATCTAGCAGAAGATGAAGAAATCGGACCACTGGTTCCAGCTACCTTGATTTCTTCATaGAAATCAGGAGACCGGCAT +
Preference number: 4 (lower is better)
Translates to: KVSVYLAEDEEIGPLVPATLISS*KSGDRH
Trigger: ATGCCGGTCTCCTGATTTTCATGAAGAAATCAAGGT...AGCTGGAACCAGTGGTCCGATTTCTTCATCTTCTGCTAGATAAACTGATACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634223.1
ENST00000637208.1
CDS-3UTR GCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTCTTCCTAACTTCGGCTaGCACCGTTCTGCTGATCTT +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLLPNFG*HRSADL
Trigger: AAGATCAGCAGAACGGTGGCAGCCGAAGTTAGGAAG...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTTATTGTCCGGAGATCTaGTTCCTAACTTCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLYCPEI*FLTSAA
Trigger: GGCAGCCGAAGTTAGGAAGCAGATCTCCGGACAATA...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTATCCACTGGATCTACTaGTTCGGTAAGGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLIHWIY*FGKGHC
Trigger: ACAGTGCCCCTTACCGAAGCAGTAGATCCAGTGGAT...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTCATCCTGGTAGCTGTTaGCATCTGGAGCTTCATCAG +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLHPGSC*HLELHQ
Trigger: CTGATGAAGCTCCAGATGGCAACAGCTACCAGGATG...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp CATATTTGCAATCTTTTGGTCTTGTACATTCGTAGAAAATCCAGAACTCTGAGACATCCTGGTAGCTGTTaGCATCTGGAGCTTCATCAG +
Preference number: 4 (lower is better)
Translates to: HICNLLVLYIRRKSRTLRHPGSC*HLELHQ
Trigger: CTGATGAAGCTCCAGATGGCAACAGCTACCAGGATG...TCTCAGAGTTCTGGATTTTCTACGAATGTACAAGACCAAAAGATTGCAAATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR GCA 90 bp AAACTGGCCAGTCTTCAACCGTCCATTCTGAAGCATTGGTATCCATGTATATCCTCATCTGGTGATGGATaGAAAGCAAAAAGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: KLASLQPSILKHWYPCISSSGDG*KAKSSL
Trigger: CAAAGAACTTTTTGCTTTGCATCCATCACCAGATGA...GGATATACATGGATACCAATGCTTCAGAATGGACGGTTGAAGACTGGCCAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR GCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCTATCTACCCATTTCATaGCAGGTAGAGGAACCTCAG +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTYLPIS*QVEEPQ
Trigger: CTGAGGTTCCTCTACCTGGCATGAAATGGGTAGATA...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTGAAAAGGTAGTGTGTTaGCTGCCACTCGTTGACGTG +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLEKVVC*LPLVDV
Trigger: CACGTCAACGAGTGGCAGGCAACACACTACCTTTTC...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp AAAGTATCAGTTTATCTAGCAGAAGATGAAGAAATCGGACCACTGGTTCCAGCTAATAGCCGGTTTAGCTaGAAGACTGAGAGATCTGTA +
Preference number: 4 (lower is better)
Translates to: KVSVYLAEDEEIGPLVPANSRFS*KTERSV
Trigger: TACAGATCTCTCAGTCTTGCAGCTAAACCGGCTATT...AGCTGGAACCAGTGGTCCGATTTCTTCATCTTCTGCTAGATAAACTGATACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR GCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTTTGTACCGATGCTACTaGTACAGTGTCGGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLLYRCY*YSVGEA
Trigger: GGCTTCTCCGACACTGTAGCAGTAGCATCGGTACAA...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTTTCGTTCTGAGTGCTTaGCTGCCATGTTCTGCAACC +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLFVLSA*LPCSAT
Trigger: GGTTGCAGAACATGGCAGGCAAGCACTCAGAACGAA...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp CATATTTGCAATCTTTTGGTCTTGTACATTCGTAGAAAATCCAGAACTCTGAGATTCGTTCTGAGTGCTTaGCTGCCATGTTCTGCAACC +
Preference number: 4 (lower is better)
Translates to: HICNLLVLYIRRKSRTLRFVLSA*LPCSAT
Trigger: GGTTGCAGAACATGGCAGGCAAGCACTCAGAACGAA...TCTCAGAGTTCTGGATTTTCTACGAATGTACAAGACCAAAAGATTGCAAATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR GCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTTTGCTTCGTTCTGAGTaGTTGCCTGCCATGTTCTGC +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLLLRSE*LPAMFC
Trigger: GCAGAACATGGCAGGCAAGCACTCAGAACGAAGCAA...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCTCCGGTCCTCCAGCATaGTCAAATATTCAGCAACAA +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTSGPPA*SNIQQQ
Trigger: TTGTTGCTGAATATTTGAGCATGCTGGAGGACCGGA...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp AAGCATTGGTATCCATGTATATCCAACTGGTGTTTCAAGAGGAGTATTTTGTTTAGACCGGCATGGCATTaGTTGGATCCTCTCCATACA +
Preference number: 4 (lower is better)
Translates to: KHWYPCISNWCFKRSILFRPAWH*LDPLHT
Trigger: TGTATGGAGAGGATCCAAGCAATGCCATGCCGGTCT...AAACAAAATACTCCTCTTGAAACACCAGTTGGATATACATGGATACCAATGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634223.1
ENST00000637208.1
CDS-3UTR GCA 90 bp AAGCATTGGTATCCATGTATATCCAACTGGTGTTTCAAGAGGAGTATTTTGTTTAGGGTCTCGTTTTGTTaGCCAGGCTGGAGCATAGTA +
Preference number: 4 (lower is better)
Translates to: KHWYPCISNWCFKRSILFRVSFC*PGWSIV
Trigger: TACTATGCTCCAGCCTGGGCAACAAAACGAGACCCT...AAACAAAATACTCCTCTTGAAACACCAGTTGGATATACATGGATACCAATGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CCA 90 bp TCCAAACTCCCAGCACTGCTAACAATATTCATTAAATGGATTGCAGTCCAAGCAGTAGCTGTTGCCATCTaGAGCTTCATCAGATTCAAA +
Preference number: 4 (lower is better)
Translates to: SKLPALLTIFIKWIAVQAVAVAI*SFIRFK
Trigger: TTTGAATCTGATGAAGCTCCAGATGGCAACAGCTAC...TGCTTGGACTGCAATCCATTTAATGAATATTGTTAGCAGTGCTGGGAGTTTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614472.5
CDS-3UTR CCA 90 bp AAAGTATCAGTTTATCTAGCAGAAGATGAAGAAATCGGACCACTGGTTCCAGCTGTAGCTGTTGCCATCTaGAGCTTCATCAGATTCAAA +
Preference number: 4 (lower is better)
Translates to: KVSVYLAEDEEIGPLVPAVAVAI*SFIRFK
Trigger: TTTGAATCTGATGAAGCTCCAGATGGCAACAGCTAC...AGCTGGAACCAGTGGTCCGATTTCTTCATCTTCTGCTAGATAAACTGATACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CCA 90 bp TCGTCAAGTTACAAGCATCATCTCCACTTGTTGTCCTTTCAAGTGATCGTCTGCTCTGTAAGTAGTGTTTaGAACATAAACATCCCTTGC +
Preference number: 4 (lower is better)
Translates to: SSSYKHHLHLLSFQVIVCSVSSV*NINIPC
Trigger: GCAAGGGATGTTTATGTTCCAAACACTACTTACAGA...GCAGACGATCACTTGAAAGGACAACAAGTGGAGATGATGCTTGTAACTTGACGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614472.5
CDS-3UTR CCA 90 bp AGACAGATCAAAAGGCTTCGACTTGATTCTGCTGAAAAGGTAGTGTGTTGCCTGTCTGTAAGTAGTGTTTaGAACATAAACATCCCTTGC +
Preference number: 4 (lower is better)
Translates to: RQIKRLRLDSAEKVVCCLSVSSV*NINIPC
Trigger: GCAAGGGATGTTTATGTTCCAAACACTACTTACAGA...CAGGCAACACACTACCTTTTCAGCAGAATCAAGTCGAAGCCTTTTGATCTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCGGCATGGCATTGCTTaGATCCTCTCCATACATAAA +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTRHGIA*ILSIHK
Trigger: TTTATGTATGGAGAGGATCCAAGCAATGCCATGCCG...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTACTGGCAAGCAAAACTaGCCAGTCTTCAACCGTCCA +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLTGKQN*PVFNRP
Trigger: TGGACGGTTGAAGACTGGCCAGTTTTGCTTGCCAGT...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCGGTCTGAGTCGTGACTaGAGAGTAAATTGTGTACCA +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTGLSRD*RVNCVP
Trigger: TGGTACACAATTTACTCTCCAGTCACGACTCAGACC...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCGAGGTAGATACAACATaGCCACTCGAGCCTTTATCT +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTEVDTT*PLEPLS
Trigger: AGATAAAGGCTCGAGTGGCCATGTTGTATCTACCTC...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTGGTCAATCGCAGATCTaGAGAGGTCTGGTAACCCTT +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLGQSQI*RGLVTL
Trigger: AAGGGTTACCAGACCTCTCCAGATCTGCGATTGACC...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTACAAGTGCTGCTGAGTaGACTAGACACTGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLTSAAE*TRHCAA
Trigger: AGCTGCACAGTGTCTAGTCCACTCAGCAGCACTTGT...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTCCATCTGAAGCATTTTaGGGTCTGCGGGATCCTGAT +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLPSEAF*GLRDPD
Trigger: ATCAGGATCCCGCAGACCCCAAAATGCTTCAGATGG...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTTCAGACAGAAAAACCTaGGCAACTTCCAAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLSDRKT*ATSKGP
Trigger: GGGGCCTTTGGAAGTTGCCCAGGTTTTTCTGTCTGA...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTAAAGGCACTTCCAGATaGGCTTCTCTCAGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLKGTSR*ASLRRR
Trigger: TCTCCTCCTGAGAGAAGCCCATCTGGAAGTGCCTTT...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635253.2
CDS-3UTR TCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCTTCTTCCTCATCTGGTaGTGGATGCAAAGCAAAAAG +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTFFLIW*WMQSKK
Trigger: CTTTTTGCTTTGCATCCATCACCAGATGAGGAAGAA...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCTGTTGTCCTTTCAAGTaGTCGTCTGCCAACAATACT +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTCCPFK*SSANNT
Trigger: AGTATTGTTGGCAGACGATCACTTGAAAGGACAACA...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp CATTCTGAAGCATTGGTATCCATGTATATCCAACTGGTGTTTCAAGAGGAGTATTGTTGTCCTTTCAAGTaGTCGTCTGCCAACAATACT +
Preference number: 4 (lower is better)
Translates to: HSEALVSMYIQLVFQEEYCCPFK*SSANNT
Trigger: AGTATTGTTGGCAGACGATCACTTGAAAGGACAACA...ATACTCCTCTTGAAACACCAGTTGGATATACATGGATACCAATGCTTCAGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCTTCAACCGTCCATTCTaGAGCATTGGTATCCATGTA +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTFNRPF*SIGIHV
Trigger: TACATGGATACCAATGCTTCAGAATGGACGGTTGAA...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCTTATCTAGCAGAAGATaGAGAAATCGGACCACTGGT +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTLSSRR*RNRTTG
Trigger: ACCAGTGGTCCGATTTCTTCATCTTCTGCTAGATAA...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp CATTCTGAAGCATTGGTATCCATGTATATCCAACTGGTGTTTCAAGAGGAGTATTTATCTAGCAGAAGATaGAGAAATCGGACCACTGGT +
Preference number: 4 (lower is better)
Translates to: HSEALVSMYIQLVFQEEYLSSRR*RNRTTG
Trigger: ACCAGTGGTCCGATTTCTTCATCTTCTGCTAGATAA...ATACTCCTCTTGAAACACCAGTTGGATATACATGGATACCAATGCTTCAGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634223.1
ENST00000637208.1
CDS-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTAACTTCATCATCTGGTaGCGTGGGAGTCCCAGATAT +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLNFIIW*RGSPRY
Trigger: ATATCTGGGACTCCCACGTCACCAGATGATGAAGTT...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCAACCCTTACTCCCGATaGTTGATCGAACTTCATCAT +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTNPYSR*LIELHH
Trigger: ATGATGAAGTTCGATCAATCATCGGGAGTAAGGGTT...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCATGCAAGGCTTGTATTaGGTCTCTCAACCATTTCTG +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTMQGLY*VSQPFL
Trigger: CAGAAATGGTTGAGAGACTCAATACAAGCCTTGCAT...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCTCTTCATTAAAATTCTaGGATGTGCCCACCAAGGAG +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTSSLKF*DVPTKE
Trigger: CTCCTTGGTGGGCACATCTCAGAATTTTAATGAAGA...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTACCAGATCCTGGACCTaGTCAGGAAATGTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLTRSWT*SGNVVS
Trigger: GGAAACAACATTTCCTGATCAGGTCCAGGATCTGGT...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCGAATCATATGGAGATTaGAAACCAGATCCTGGACCT +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTESYGD*KPDPGP
Trigger: AGGTCCAGGATCTGGTTTTCAATCTCCATATGATTC...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTATGATTGCTTCGTTCTaGGTGCTTGCCTGCCATGTT +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLMIASF*VLACHV
Trigger: AACATGGCAGGCAAGCACTCAGAACGAAGCAATCAT...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp TCCGTAAAATCCCTCCAATCTGTGAGATATCTCTGCAAGTTTGGTTATTGCAGGTCCCGATTAGCTTCATaGATAGGAATAAGTACTTTG +
Preference number: 4 (lower is better)
Translates to: SVKSLQSVRYLCKFGYCRSRLAS*IGISTL
Trigger: CAAAGTACTTATTCCTATTCATGAAGCTAATCGGGA...CCTGCAATAACCAAACTTGCAGAGATATCTCACAGATTGGAGGGATTTTACGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635088.1
CDS-3UTR TCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCAATCCCTCCAATCTGTaGGATATCTCTGCAAGTTTG +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTNPSNL*DISASL
Trigger: CAAACTTGCAGAGATATCTCACAGATTGGAGGGATT...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTCTTTTGAATTGTTCATaGAGTTCCCCATGGGCACGG +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLLLNCS*SSPWAR
Trigger: CCGTGCCCATGGGGAACTTCATGAACAATTCAAAAG...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCACTGCCTTGTATAACTaGGGGATCTTTCTGTTGATC +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTTALYN*GIFLLI
Trigger: GATCAACAGAAAGATCCCTCAGTTATACAAGGCAGT...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTGAAACAAGAGTTCTaGAGTCCCGAGGACTATAAA +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTLKQEF*SPEDYK
Trigger: TTTATAGTCCTCGGGACTGCAGAACTCTTGTTTCAG...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp ACTAGTGGAATGCTAGTGGAATTTTTGAAGGTGCAGCCAAATTGGAAAACAGTGTTGGCAAAACTGATCTaGTTGACTCTTCAGTTTCTC +
Preference number: 4 (lower is better)
Translates to: TSGMLVEFLKVQPNWKTVLAKLI*LTLQFL
Trigger: GAGAAACTGAAGAGTCAAGCAGATCAGTTTTGCCAA...CACTGTTTTCCAATTTGGCTGCACCTTCAAAAATTCCACTAGCATTCCACTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635827.1
CDS-3UTR GCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTTTACCGGCATGGCATTaGTTGGATCCTCTCCATACA +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLLPAWH*LDPLHT
Trigger: TGTATGGAGAGGATCCAAGCAATGCCATGCCGGTAA...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTGACGTCTCTGTGTaGGAAGACATACGATTACAA +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTLDVSV*EDIRLQ
Trigger: TTGTAATCGTATGTCTTCGCACACAGAGACGTCAAG...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCAATAGCCGGTTTAGCTaGAAGACTGAGAGATCTGTA +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTNSRFS*KTERSV
Trigger: TACAGATCTCTCAGTCTTGCAGCTAAACCGGCTATT...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCGTTTCCATCAATCAGTaGTTCGTGTTCAATCTCTGC +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTVSINQ*FVFNLC
Trigger: GCAGAGATTGAACACGAAGCACTGATTGATGGAAAC...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTACCGTATTGTACCGATaGTACTGCTACAGTGTCGGA +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLTVLYR*YCYSVG
Trigger: TCCGACACTGTAGCAGTAGCATCGGTACAATACGGT...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp TCCATGTATATCCAACTGGTGTTTCAAGAGGAGTATTTTGTTTTTGTTGACAACCAGCTTCAGCATGATTaGTTCGTTCTGAGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: SMYIQLVFQEEYFVFVDNQLQHD*FVLSAC
Trigger: GCAAGCACTCAGAACGAAGCAATCATGCTGAAGCTG...GTTGTCAACAAAAACAAAATACTCCTCTTGAAACACCAGTTGGATATACATGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR GCA 90 bp CGTAAAATCCCTCCAATCTGTGAGATATCTCTGCAAGTTTGGTTATTGCAGGCTGTAAACTTCATTAACTaGTTCATACATGCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: RKIPPICEISLQVWLLQAVNFIN*FIHASH
Trigger: ATGGCTGGCATGTATGAAGCAGTTAATGAAGTTTAC...AGCCTGCAATAACCAAACTTGCAGAGATATCTCACAGATTGGAGGGATTTTACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635088.1
CDS-3UTR GCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTGGGATCCTGATGTGTTaGAAATGCCAACTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLGILMC*KCQLLC
Trigger: ACACAGGAGTTGGCATTTGCAACACATCAGGATCCC...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp GTAGATAAACTGCACTTTGGTTACAGGCCATGCTGTGTAGTAGCACTTTTAGCAGGATATATTATCAGGTaGTCAGTTATGGGTCTATAC +
Preference number: 4 (lower is better)
Translates to: VDKLHFGYRPCCVVALLAGYIIR*SVMGLY
Trigger: GTATAGACCCATAACTGAGCACCTGATAATATATCC...TGCTAAAAGTGCTACTACACAGCATGGCCTGTAACCAAAGTGCAGTTTATCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCATCTTCCAAATCCACTaGATCTACTGCTTCGGTAAG +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTIFQIH*IYCFGK
Trigger: CTTACCGAAGCAGTAGATCCAGTGGATTTGGAAGAT...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCGTAGCTGTTGCCATCTaGAGCTTCATCAGATTCAAA +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTVAVAI*SFIRFK
Trigger: TTTGAATCTGATGAAGCTCCAGATGGCAACAGCTAC...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTCACTGTGAGAGTAGCTaGTCGAAAGCTCGTCAAGTT +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLHCESS*SKARQV
Trigger: AACTTGACGAGCTTTCGACCAGCTACTCTCACAGTG...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTCAAAGATTACCGGCATaGCATTGCTTGGATCCTCTC +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLQRLPA*HCLDPL
Trigger: GAGAGGATCCAAGCAATGCCATGCCGGTAATCTTTG...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp TATTTTCCAGAGCAGATACCTTCTTCATCTGGAGATACCACATCATCTGAGACCCCATGTATATCCAACTaGTGTTTCAAGAGGAGTATT +
Preference number: 4 (lower is better)
Translates to: YFPEQIPSSSGDTTSSETPCISN*CFKRSI
Trigger: AATACTCCTCTTGAAACACCAGTTGGATATACATGG...GGTCTCAGATGATGTGGTATCTCCAGATGAAGAAGGTATCTGCTCTGGAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTCATCATCTGGTGACGTaGGAGTCCCAGATATATCTG +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLHHLVT*ESQIYL
Trigger: CAGATATATCTGGGACTCCCACGTCACCAGATGATG...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp TCCATGTATATCCAACTGGTGTTTCAAGAGGAGTATTTTGTTTTTGTTGACAACCATCATCTGGTGACGTaGGAGTCCCAGATATATCTG +
Preference number: 4 (lower is better)
Translates to: SMYIQLVFQEEYFVFVDNHHLVT*ESQIYL
Trigger: CAGATATATCTGGGACTCCCACGTCACCAGATGATG...GTTGTCAACAAAAACAAAATACTCCTCTTGAAACACCAGTTGGATATACATGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCAGGACACCAGAACACTaGGATTCGGTAATGAGTAAA +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTRTPEH*DSVMSK
Trigger: TTTACTCATTACCGAATCCCAGTGTTCTGGTGTCCT...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTGTACCATTTCTTGCCTaGCACCTATGCTCCCAAGAA +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLVPFLA*HLCSQE
Trigger: TTCTTGGGAGCATAGGTGCCAGGCAAGAAATGGTAC...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp TCCATGTATATCCAACTGGTGTTTCAAGAGGAGTATTTTGTTTTTGTTGACAACGTACCATTTCTTGCCTaGCACCTATGCTCCCAAGAA +
Preference number: 4 (lower is better)
Translates to: SMYIQLVFQEEYFVFVDNVPFLA*HLCSQE
Trigger: TTCTTGGGAGCATAGGTGCCAGGCAAGAAATGGTAC...GTTGTCAACAAAAACAAAATACTCCTCTTGAAACACCAGTTGGATATACATGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCCAAATCCCCGAACTTaGTTCCATAAAAACCAACAC +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTPNPRT*FHKNQH
Trigger: GTGTTGGTTTTTATGGAACCAAGTTCGGGGATTTGG...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTCTGAAGGAATCTCTGTaGCAGGTGACAGGCAATACT +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLLKESL*QVTGNT
Trigger: AGTATTGCCTGTCACCTGCCACAGAGATTCCTTCAG...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
3UTR CAA 72 bp TCATCTGGTGACGTGGGAGTCCCAGATATATCTGGATaGCTATTACTAAGGCTTCGAGAACGATTTAAATTA +
Preference number: 4 (lower is better)
Translates to: SSGDVGVPDISG*LLLRLRERFKL
Trigger: TAATTTAAATCGTTCTCGAAGCCTTAGTAATAGCAATCCAGATATATCTGGGACTCCCACGTCACCAGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTTTCTTCAGGTACAGCTaGAACAAGAGTTCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLFFRYS*NKSSAV
Trigger: GACTGCAGAACTCTTGTTTCAGCTGTACCTGAAGAA...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTTGGTGGTTTTTCCAATaGGACTGGCAAGCAAAACTG +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLWWFFQ*DWQAKL
Trigger: CAGTTTTGCTTGCCAGTCTCATTGGAAAAACCACCA...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTAAGTTATTTTCCATaGTTCGCATGTCCCCAATTC +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTLSYFP*FACPQF
Trigger: GAATTGGGGACATGCGAATCATGGAAAATAACTTAG...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp CATTCTGAAGCATTGGTATCCATGTATATCCAACTGGTGTTTCAAGAGGAGTATCTAAGTTATTTTCCATaGTTCGCATGTCCCCAATTC +
Preference number: 4 (lower is better)
Translates to: HSEALVSMYIQLVFQEEYLSYFP*FACPQF
Trigger: GAATTGGGGACATGCGAATCATGGAAAATAACTTAG...ATACTCCTCTTGAAACACCAGTTGGATATACATGGATACCAATGCTTCAGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000634223.1
ENST00000637208.1
CDS-3UTR TCA 90 bp CATTCTGAAGCATTGGTATCCATGTATATCCAACTGGTGTTTCAAGAGGAGTATGCTTCAAAAGATGCTTaGCCTAGGTTAACTATTTGG +
Preference number: 4 (lower is better)
Translates to: HSEALVSMYIQLVFQEEYASKDA*PRLTIW
Trigger: CCAAATAGTTAACCTAGGTCAAGCATCTTTTGAAGC...ATACTCCTCTTGAAACACCAGTTGGATATACATGGATACCAATGCTTCAGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTCTGCCATGCTGGTCATaGTTTCCTTCCAAGTTTTTG +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLLPCWS*FPSKFL
Trigger: CAAAAACTTGGAAGGAAATCATGACCAGCATGGCAG...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp CATATTTGCAATCTTTTGGTCTTGTACATTCGTAGAAAATCCAGAACTCTGAGACTGCCATGCTGGTCATaGTTTCCTTCCAAGTTTTTG +
Preference number: 4 (lower is better)
Translates to: HICNLLVLYIRRKSRTLRLPCWS*FPSKFL
Trigger: CAAAAACTTGGAAGGAAATCATGACCAGCATGGCAG...TCTCAGAGTTCTGGATTTTCTACGAATGTACAAGACCAAAAGATTGCAAATATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTCTTACTCCCGATGATTaGTCGAACTTCATCATCTGG +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLLTPDD*SNFIIW
Trigger: CCAGATGATGAAGTTCGATCAATCATCGGGAGTAAG...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp CATATTTGCAATCTTTTGGTCTTGTACATTCGTAGAAAATCCAGAACTCTGAGACTTACTCCCGATGATTaGTCGAACTTCATCATCTGG +
Preference number: 4 (lower is better)
Translates to: HICNLLVLYIRRKSRTLRLTPDD*SNFIIW
Trigger: CCAGATGATGAAGTTCGATCAATCATCGGGAGTAAG...TCTCAGAGTTCTGGATTTTCTACGAATGTACAAGACCAAAAGATTGCAAATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTCTGCAATGTCATCCATaGAACGTTCTGGAAAACGAC +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLLQCHP*NVLEND
Trigger: GTCGTTTTCCAGAACGTTTCATGGATGACATTGCAG...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCGAAAATCCAGAACTCTaGGATGTTGCAGAAGAAACA +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTENPEL*DVAEET
Trigger: TGTTTCTTCTGCAACATCTCAGAGTTCTGGATTTTC...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTGAGTTCAGGAAACTTTaGAACCAAGGCTCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLEFRKL*NQGSLC
Trigger: ACACAGAGAGCCTTGGTTTCAAAGTTTCCTGAACTC...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp ACTAGTGGAATGCTAGTGGAATTTTTGAAGGTGCAGCCAAATTGGAAAACAGTGCCAATACACACAAAATaGTGCTTAATATCGCTAGCT +
Preference number: 4 (lower is better)
Translates to: TSGMLVEFLKVQPNWKTVPIHTK*CLISLA
Trigger: AGCTAGCGATATTAAGCATCATTTTGTGTGTATTGG...CACTGTTTTCCAATTTGGCTGCACCTTCAAAAATTCCACTAGCATTCCACTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635827.1
CDS-3UTR GCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTTATCTACCCATTTCATaGCAGGTAGAGGAACCTCAG +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLYLPIS*QVEEPQ
Trigger: CTGAGGTTCCTCTACCTGGCATGAAATGGGTAGATA...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTGCACTCCACCAAGAATaGTCTCTTTGGATTCCGTTA +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLALHQE*SLWIPL
Trigger: TAACGGAATCCAAAGAGAGCATTCTTGGTGGAGTGC...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp AACAACTTCAACATTAAAAACACCTTTGTGATTATCTACCCATTTCATGCCAGGGCACTCCACCAAGAATaGTCTCTTTGGATTCCGTTA +
Preference number: 4 (lower is better)
Translates to: NNFNIKNTFVIIYPFHARALHQE*SLWIPL
Trigger: TAACGGAATCCAAAGAGAGCATTCTTGGTGGAGTGC...CCTGGCATGAAATGGGTAGATAATCACAAAGGTGTTTTTAATGTTGAAGTTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR GCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCTTTGGTTACAGGCCATaGTGTGTAGTAGCACTTTTA +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTFGYRP*CVVALL
Trigger: TAAAAGTGCTACTACACAGCATGGCCTGTAACCAAA...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp AAAGTATCAGTTTATCTAGCAGAAGATGAAGAAATCGGACCACTGGTTCCAGCTCATAAATCAGCACACTaGTCTGTCTCTTCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: KVSVYLAEDEEIGPLVPAHKSAH*SVSSSN
Trigger: ATTTGAAGAAGAGACAGAGCAGTGTGCTGATTTATG...AGCTGGAACCAGTGGTCCGATTTCTTCATCTTCTGCTAGATAAACTGATACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR GCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCAGTGACATTGTTACCTaGATTTTAACCCTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTSDIVT*ILTLAK
Trigger: CTTTGCCAGGGTTAAAATGCAGGTAACAATGTCACT...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTTCCGGTCCTCCAGCATaGTCAAATATTCAGCAACAA +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLSGPPA*SNIQQQ
Trigger: TTGTTGCTGAATATTTGAGCATGCTGGAGGACCGGA...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp AACAACTTCAACATTAAAAACACCTTTGTGATTATCTACCCATTTCATGCCAGGTCCGGTCCTCCAGCATaGTCAAATATTCAGCAACAA +
Preference number: 4 (lower is better)
Translates to: NNFNIKNTFVIIYPFHARSGPPA*SNIQQQ
Trigger: TTGTTGCTGAATATTTGAGCATGCTGGAGGACCGGA...CCTGGCATGAAATGGGTAGATAATCACAAAGGTGTTTTTAATGTTGAAGTTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR GCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCTCCTGTGTCTTTTTCTaGATGTCCTCAATAGCAACT +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTSCVFF*MSSIAT
Trigger: AGTTGCTATTGAGGACATGCAGAAAAAGACACAGGA...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTGATGTGTTGCAAATaGCAACTCCTGTGTCTTTTT +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTLMCCK*QLLCLF
Trigger: AAAAAGACACAGGAGTTGGCATTTGCAACACATCAG...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCAGGTTTTTGAGCAGTTaGGGAGAACCACTATATTGT +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTRFLSS*GEPLYC
Trigger: ACAATATAGTGGTTCTCCCCAACTGCTCAAAAACCT...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTCGGCATGGCATTGCTTaGATCCTCTCCATACATAAA +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLRHGIA*ILSIHK
Trigger: TTTATGTATGGAGAGGATCCAAGCAATGCCATGCCG...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp AAGCATTGGTATCCATGTATATCCAACTGGTGTTTCAAGAGGAGTATTTTGTTTCGGCATGGCATTGCTTaGATCCTCTCCATACATAAA +
Preference number: 4 (lower is better)
Translates to: KHWYPCISNWCFKRSILFRHGIA*ILSIHK
Trigger: TTTATGTATGGAGAGGATCCAAGCAATGCCATGCCG...AAACAAAATACTCCTCTTGAAACACCAGTTGGATATACATGGATACCAATGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634223.1
ENST00000637208.1
CDS-3UTR CCA 90 bp TCCATGTATATCCAACTGGTGTTTCAAGAGGAGTATTTTGTTTTTGTTGACAACCGGCATGGCATTGCTTaGATCCTCTCCATACATAAA +
Preference number: 4 (lower is better)
Translates to: SMYIQLVFQEEYFVFVDNRHGIA*ILSIHK
Trigger: TTTATGTATGGAGAGGATCCAAGCAATGCCATGCCG...GTTGTCAACAAAAACAAAATACTCCTCTTGAAACACCAGTTGGATATACATGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000634223.1
ENST00000637208.1
CDS-3UTR CCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTCCTAGGTTAACTATTTaGCCAGCAATGACAGGAGGT +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLPRLTI*PAMTGG
Trigger: ACCTCCTGTCATTGCTGGCCAAATAGTTAACCTAGG...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCATCCATGAAACGTTCTaGAAAACGACTTTTCCTTGG +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTIHETF*KTTFPW
Trigger: CCAAGGAAAAGTCGTTTTCCAGAACGTTTCATGGAT...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp CATTCTGAAGCATTGGTATCCATGTATATCCAACTGGTGTTTCAAGAGGAGTATATCCATGAAACGTTCTaGAAAACGACTTTTCCTTGG +
Preference number: 4 (lower is better)
Translates to: HSEALVSMYIQLVFQEEYIHETF*KTTFPW
Trigger: CCAAGGAAAAGTCGTTTTCCAGAACGTTTCATGGAT...ATACTCCTCTTGAAACACCAGTTGGATATACATGGATACCAATGCTTCAGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CCA 90 bp CATATTTGCAATCTTTTGGTCTTGTACATTCGTAGAAAATCCAGAACTCTGAGAGGTCTGAGTCGTGACTaGAGAGTAAATTGTGTACCA +
Preference number: 4 (lower is better)
Translates to: HICNLLVLYIRRKSRTLRGLSRD*RVNCVP
Trigger: TGGTACACAATTTACTCTCCAGTCACGACTCAGACC...TCTCAGAGTTCTGGATTTTCTACGAATGTACAAGACCAAAAGATTGCAAATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTGAGGTAGATACAACATaGCCACTCGAGCCTTTATCT +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLEVDTT*PLEPLS
Trigger: AGATAAAGGCTCGAGTGGCCATGTTGTATCTACCTC...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCAGTGGCTATACAAATTaGTCTTCCTCGTTGATTGTG +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTSGYTN*SSSLIV
Trigger: CACAATCAACGAGGAAGACCAATTTGTATAGCCACT...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCAGGTCTGGTAACCCTTaGCAATTCTGTACATTAGAT +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTRSGNP*QFCTLD
Trigger: ATCTAATGTACAGAATTGCCAAGGGTTACCAGACCT...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
3UTR CAA 72 bp CCCTCTTTCAGAGTTGATCGCCCTGCTCATTATAATTaGCTGTTTCTAATCCTGTTCTATCTTTTAACTGCT +
Preference number: 4 (lower is better)
Translates to: PSFRVDRPAHYN*LFLILFYLLTA
Trigger: AGCAGTTAAAAGATAGAACAGGATTAGAAACAGCAAATTATAATGAGCAGGGCGATCAACTCTGAAAGAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCTTCTTTGTGACGGTTTaGTTTCCTTTGGTCATCATT +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTFFVTV*FPLVII
Trigger: AATGATGACCAAAGGAAATCAAACCGTCACAAAGAA...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTTTCTTCCTCATCTGGTaGTGGATGCAAAGCAAAAAG +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLFFLIW*WMQSKK
Trigger: CTTTTTGCTTTGCATCCATCACCAGATGAGGAAGAA...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp GAACATATAAAGAACTCCTACAACTCAATGCCAAGAAGGTTAAAACCCCATTTATTCTTCCTCATCTGGTaGTGGATGCAAAGCAAAAAG +
Preference number: 4 (lower is better)
Translates to: EHIKNSYNSMPRRLKPHLFFLIW*WMQSKK
Trigger: CTTTTTGCTTTGCATCCATCACCAGATGAGGAAGAA...TAAATGGGGTTTTAACCTTCTTGGCATTGAGTTGTAGGAGTTCTTTATATGTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635827.1
CDS-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTTGTTGTCCTTTCAAGTaGTCGTCTGCCAACAATACT +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLCCPFK*SSANNT
Trigger: AGTATTGTTGGCAGACGATCACTTGAAAGGACAACA...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCTTTCTAGCAGAACCTTaGCGATTGGCAAAATTAAGA +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTFLAEP*RLAKLR
Trigger: TCTTAATTTTGCCAATCGTCAAGGTTCTGCTAGAAA...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTTTCAACCGTCCATTCTaGAGCATTGGTATCCATGTA +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLFNRPF*SIGIHV
Trigger: TACATGGATACCAATGCTTCAGAATGGACGGTTGAA...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp AACAACTTCAACATTAAAAACACCTTTGTGATTATCTACCCATTTCATGCCAGGTTCAACCGTCCATTCTaGAGCATTGGTATCCATGTA +
Preference number: 4 (lower is better)
Translates to: NNFNIKNTFVIIYPFHARFNRPF*SIGIHV
Trigger: TACATGGATACCAATGCTTCAGAATGGACGGTTGAA...CCTGGCATGAAATGGGTAGATAATCACAAAGGTGTTTTTAATGTTGAAGTTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000634223.1
ENST00000637208.1
CDS-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTTTATCTAGCAGAAGATaGAGAAATCGGACCACTGGT +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLLSSRR*RNRTTG
Trigger: ACCAGTGGTCCGATTTCTTCATCTTCTGCTAGATAA...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTAACCCTTACTCCCGATaGTTGATCGAACTTCATCAT +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLNPYSR*LIELHH
Trigger: ATGATGAAGTTCGATCAATCATCGGGAGTAAGGGTT...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTAAAGCCAGCTCCTCGTaGAAAAGCTTTTTAGTTGGT +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLKASSS*KSFLVG
Trigger: ACCAACTAAAAAGCTTTTTCACGAGGAGCTGGCTTT...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCGTCCTTCTGAAATCGTaGAACTATATCACTAGCAAT +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTVLLKS*NYITSN
Trigger: ATTGCTAGTGATATAGTTTCACGATTTCAGAAGGAC...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTATGCAAGGCTTGTATTaGGTCTCTCAACCATTTCTG +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLMQGLY*VSQPFL
Trigger: CAGAAATGGTTGAGAGACTCAATACAAGCCTTGCAT...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCTGCTCTCATGTCTTTTaGTTTCTTAAAGGTCAAGCT +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTCSHVF*FLKGQA
Trigger: AGCTTGACCTTTAAGAAATCAAAAGACATGAGAGCA...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTTCTTCATTAAAATTCTaGGATGTGCCCACCAAGGAG +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLSSLKF*DVPTKE
Trigger: CTCCTTGGTGGGCACATCTCAGAATTTTAATGAAGA...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTGAATCATATGGAGATTaGAAACCAGATCCTGGACCT +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLESYGD*KPDPGP
Trigger: AGGTCCAGGATCTGGTTTTCAATCTCCATATGATTC...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCTCCCGATTAGCTTCATaGATAGGAATAAGTACTTTG +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTSRLAS*IGISTL
Trigger: CAAAGTACTTATTCCTATTCATGAAGCTAATCGGGA...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTAATCCCTCCAATCTGTaGGATATCTCTGCAAGTTTG +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLNPSNL*DISASL
Trigger: CAAACTTGCAGAGATATCTCACAGATTGGAGGGATT...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCATGATCTCTTCTTTATaGGTGACATTGACCCTTGTT +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTMISSL*VTLTLV
Trigger: AACAAGGGTCAATGTCACTCATAAAGAAGAGATCAT...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTAGTCGCAGTTTATTATaGTGTCTGAAGAGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLSRSLL*CLKSFG
Trigger: CCCAAAGCTCTTCAGACATCATAATAAACTGCGACT...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTACTGCCTTGTATAACTaGGGGATCTTTCTGTTGATC +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLTALYN*GIFLLI
Trigger: GATCAACAGAAAGATCCCTCAGTTATACAAGGCAGT...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp TCCATGTATATCCAACTGGTGTTTCAAGAGGAGTATTTTGTTTTTGTTGACAACTCAGAAGGACATATCTaGCCATTTTATGTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: SMYIQLVFQEEYFVFVDNSEGHI*PFYVPV
Trigger: GACTGGGACATAAAATGGTCAGATATGTCCTTCTGA...GTTGTCAACAAAAACAAAATACTCCTCTTGAAACACCAGTTGGATATACATGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp CATATTTGCAATCTTTTGGTCTTGTACATTCGTAGAAAATCCAGAACTCTGAGAACCTTGATTTCTTCATaGAAATCAGGAGACCGGCAT +
Preference number: 4 (lower is better)
Translates to: HICNLLVLYIRRKSRTLRTLISS*KSGDRH
Trigger: ATGCCGGTCTCCTGATTTTCATGAAGAAATCAAGGT...TCTCAGAGTTCTGGATTTTCTACGAATGTACAAGACCAAAAGATTGCAAATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR GCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTCTGAAACAAGAGTTCTaGAGTCCCGAGGACTATAAA +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLLKQEF*SPEDYK
Trigger: TTTATAGTCCTCGGGACTGCAGAACTCTTGTTTCAG...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp AAACAAATCTTGAAACAGGATAAAAGCTGGAAGACCCACTCTTCTCAATTTCAACTGAAACAAGAGTTCTaGAGTCCCGAGGACTATAAA +
Preference number: 4 (lower is better)
Translates to: KQILKQDKSWKTHSSQFQLKQEF*SPEDYK
Trigger: TTTATAGTCCTCGGGACTGCAGAACTCTTGTTTCAG...TTGAAATTGAGAAGAGTGGGTCTTCCAGCTTTTATCCTGTTTCAAGATTTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635827.1
CDS-3UTR GCA 90 bp ACTAGTGGAATGCTAGTGGAATTTTTGAAGGTGCAGCCAAATTGGAAAACAGTGTTTTCTGATGACAATTaGCCAGTCTTCTGTATAACT +
Preference number: 4 (lower is better)
Translates to: TSGMLVEFLKVQPNWKTVFSDDN*PVFCIT
Trigger: AGTTATACAGAAGACTGGGCAATTGTCATCAGAAAA...CACTGTTTTCCAATTTGGCTGCACCTTCAAAAATTCCACTAGCATTCCACTAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635827.1
CDS-3UTR GCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCTCATCTGGTGATGGATaGAAAGCAAAAAGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTSSGDG*KAKSSL
Trigger: CAAAGAACTTTTTGCTTTGCATCCATCACCAGATGA...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTCTTGACGTCTCTGTGTaGGAAGACATACGATTACAA +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLLDVSV*EDIRLQ
Trigger: TTGTAATCGTATGTCTTCGCACACAGAGACGTCAAG...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTAATAGCCGGTTTAGCTaGAAGACTGAGAGATCTGTA +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLNSRFS*KTERSV
Trigger: TACAGATCTCTCAGTCTTGCAGCTAAACCGGCTATT...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTGTTTCCATCAATCAGTaGTTCGTGTTCAATCTCTGC +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLVSINQ*FVFNLC
Trigger: GCAGAGATTGAACACGAAGCACTGATTGATGGAAAC...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp AAACAAATCTTGAAACAGGATAAAAGCTGGAAGACCCACTCTTCTCAATTTCAAATCTTCCAAATCCACTaGATCTACTGCTTCGGTAAG +
Preference number: 4 (lower is better)
Translates to: KQILKQDKSWKTHSSQFQIFQIH*IYCFGK
Trigger: CTTACCGAAGCAGTAGATCCAGTGGATTTGGAAGAT...TTGAAATTGAGAAGAGTGGGTCTTCCAGCTTTTATCCTGTTTCAAGATTTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635827.1
CDS-3UTR CCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCACAGTCTCTAACATGTaGATCCATTTCACTTTCTTC +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTTVSNM*IHFTFF
Trigger: GAAGAAAGTGAAATGGATCCACATGTTAGAGACTGT...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTGTAGCTGTTGCCATCTaGAGCTTCATCAGATTCAAA +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLVAVAI*SFIRFK
Trigger: TTTGAATCTGATGAAGCTCCAGATGGCAACAGCTAC...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCTCTGTAAGTAGTGTTTaGAACATAAACATCCCTTGC +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTSVSSV*NINIPC
Trigger: GCAAGGGATGTTTATGTTCCAAACACTACTTACAGA...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCTCCATTCTGAAGCATTaGTATCCATGTATATCCAAC +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTSILKH*YPCISN
Trigger: GTTGGATATACATGGATACCAATGCTTCAGAATGGA...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCAGTCCCAGATATATCTaGATTGCTATTACTAAGGCT +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTSPRYI*IAITKA
Trigger: AGCCTTAGTAATAGCAATCCAGATATATCTGGGACT...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTAGGACACCAGAACACTaGGATTCGGTAATGAGTAAA +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLRTPEH*DSVMSK
Trigger: TTTACTCATTACCGAATCCCAGTGTTCTGGTGTCCT...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTCCAAATCCCCGAACTTaGTTCCATAAAAACCAACAC +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLPNPRT*FHKNQH
Trigger: GTGTTGGTTTTTATGGAACCAAGTTCGGGGATTTGG...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCATATGTGTCAAAGTATaGCTCCACATAGGTAATCTG +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTICVKV*LHIGNL
Trigger: CAGATTACCTATGTGGAGCCATACTTTGACACATAT...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp ACTAGTGGAATGCTAGTGGAATTTTTGAAGGTGCAGCCAAATTGGAAAACAGTGATACATGCTACGACATaGATGAACCTGAAAAACATT +
Preference number: 4 (lower is better)
Translates to: TSGMLVEFLKVQPNWKTVIHATT*MNLKNI
Trigger: AATGTTTTTCAGGTTCATCCATGTCGTAGCATGTAT...CACTGTTTTCCAATTTGGCTGCACCTTCAAAAATTCCACTAGCATTCCACTAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000635827.1
CDS-3UTR CCA 90 bp AAGCATTGGTATCCATGTATATCCAACTGGTGTTTCAAGAGGAGTATTTTGTTTTGTCAGCCACCATGCTaGGCTTTCATATCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: KHWYPCISNWCFKRSILFCQPPC*AFISFF
Trigger: AAAGAAAGATATGAAAGCCCAGCATGGTGGCTGACA...AAACAAAATACTCCTCTTGAAACACCAGTTGGATATACATGGATACCAATGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
3UTR CAA 72 bp ATAATCATCAGTGGCTATACAAATTGGTCTTCCTCGTaGATTGTGAGTTTCTGTAAAATCATACAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: IIISGYTNWSSS*IVSFCKIIQLR
Trigger: CCTCAGCTGTATGATTTTACAGAAACTCACAATCAACGAGGAAGACCAATTTGTATAGCCACTGATGATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTCTAAGTTATTTTCCATaGTTCGCATGTCCCCAATTC +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLLSYFP*FACPQF
Trigger: GAATTGGGGACATGCGAATCATGGAAAATAACTTAG...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTGCTTCAAAAGATGCTTaGCCTAGGTTAACTATTTGG +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLASKDA*PRLTIW
Trigger: CCAAATAGTTAACCTAGGTCAAGCATCTTTTGAAGC...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTGAAAATCCAGAACTCTaGGATGTTGCAGAAGAAACA +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLENPEL*DVAEET
Trigger: TGTTTCTTCTGCAACATCTCAGAGTTCTGGATTTTC...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTAGGGTGTACAGTACATaGATCGACGAAGATTGTAAT +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLRVYST*IDEDCN
Trigger: ATTACAATCTTCGTCGATTCATGTACTGTACACCCT...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCTTTTCTGATGACAATTaGCCAGTCTTCTGTATAACT +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTFSDDN*PVFCIT
Trigger: AGTTATACAGAAGACTGGGCAATTGTCATCAGAAAA...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTTTGGCAAAACTGATCTaGTTGACTCTTCAGTTTCTC +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLLAKLI*LTLQFL
Trigger: GAGAAACTGAAGAGTCAAGCAGATCAGTTTTGCCAA...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTTTTGGTTACAGGCCATaGTGTGTAGTAGCACTTTTA +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLFGYRP*CVVALL
Trigger: TAAAAGTGCTACTACACAGCATGGCCTGTAACCAAA...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTAGTGACATTGTTACCTaGATTTTAACCCTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLSDIVT*ILTLAK
Trigger: CTTTGCCAGGGTTAAAATGCAGGTAACAATGTCACT...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTTCCTGTGTCTTTTTCTaGATGTCCTCAATAGCAACT +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLSCVFF*MSSIAT
Trigger: AGTTGCTATTGAGGACATGCAGAAAAAGACACAGGA...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTCTGATGTGTTGCAAATaGCAACTCCTGTGTCTTTTT +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLLMCCK*QLLCLF
Trigger: AAAAAGACACAGGAGTTGGCATTTGCAACACATCAG...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp AAACAAATCTTGAAACAGGATAAAAGCTGGAAGACCCACTCTTCTCAATTTCAAGAGTACCACTTCACTTaGACTAGAATGACTACAATC +
Preference number: 4 (lower is better)
Translates to: KQILKQDKSWKTHSSQFQEYHFT*TRMTTI
Trigger: GATTGTAGTCATTCTAGTGCAAGTGAAGTGGTACTC...TTGAAATTGAGAAGAGTGGGTCTTCCAGCTTTTATCCTGTTTCAAGATTTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635827.1
CDS-3UTR GCA 90 bp AAACAAATCTTGAAACAGGATAAAAGCTGGAAGACCCACTCTTCTCAATTTCAATATCAAAATCCCAGATaGCTTTGTGCACAAACTGAC +
Preference number: 4 (lower is better)
Translates to: KQILKQDKSWKTHSSQFQYQNPR*LCAQTD
Trigger: GTCAGTTTGTGCACAAAGGCATCTGGGATTTTGATA...TTGAAATTGAGAAGAGTGGGTCTTCCAGCTTTTATCCTGTTTCAAGATTTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635827.1
CDS-3UTR CCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTAGGTTTTTGAGCAGTTaGGGAGAACCACTATATTGT +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLRFLSS*GEPLYC
Trigger: ACAATATAGTGGTTCTCCCCAACTGCTCAAAAACCT...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTATCCATGAAACGTTCTaGAAAACGACTTTTCCTTGG +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLIHETF*KTTFPW
Trigger: CCAAGGAAAAGTCGTTTTCCAGAACGTTTCATGGAT...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTAGTGGCTATACAAATTaGTCTTCCTCGTTGATTGTG +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLSGYTN*SSSLIV
Trigger: CACAATCAACGAGGAAGACCAATTTGTATAGCCACT...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCTCAGAAAGAATCATATaGAGATTGAAAACCAGATCC +
Preference number: 4 (lower is better)
Translates to: GLSMIFILLGLELVLESTSERII*RLKTRS
Trigger: GGATCTGGTTTTCAATCTCCATATGATTCTTTCTGA...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTAGGTCTGGTAACCCTTaGCAATTCTGTACATTAGAT +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLRSGNP*QFCTLD
Trigger: ATCTAATGTACAGAATTGCCAAGGGTTACCAGACCT...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp ATCTTGAAACAGGATAAAAGCTGGAAGACCCACTCTTCTCAATTTCAAAACTTAAAAGGTAAAGTAATTTaGTATAGCAGCGGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: ILKQDKSWKTHSSQFQNLKGKVI*YSSGPQ
Trigger: TTGGGGACCGCTGCTATACCAAATTACTTTACCTTT...TAAGTTTTGAAATTGAGAAGAGTGGGTCTTCCAGCTTTTATCCTGTTTCAAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000635827.1
CDS-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTCTTTGGTCATCATTCTaGCGGTCTATTTCTTCATTT +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLLWSSF*RSISSF
Trigger: AAATGAAGAAATAGACCGTCAGAATGATGACCAAAG...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTTTCTTTGTGACGGTTTaGTTTCCTTTGGTCATCATT +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLFFVTV*FPLVII
Trigger: AATGATGACCAAAGGAAATCAAACCGTCACAAAGAA...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTTTTCTAGCAGAACCTTaGCGATTGGCAAAATTAAGA +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLFLAEP*RLAKLR
Trigger: TCTTAATTTTGCCAATCGTCAAGGTTCTGCTAGAAA...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTGTCCTTCTGAAATCGTaGAACTATATCACTAGCAAT +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLVLLKS*NYITSN
Trigger: ATTGCTAGTGATATAGTTTCACGATTTCAGAAGGAC...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTGTAAAATCATACAGCTaGGGTACAGTTTCCATGATA +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLVKSYS*GTVSMI
Trigger: TATCATGGAAACTGTACCTCAGCTGTATGATTTTAC...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTTGCTCTCATGTCTTTTaGTTTCTTAAAGGTCAAGCT +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLCSHVF*FLKGQA
Trigger: AGCTTGACCTTTAAGAAATCAAAAGACATGAGAGCA...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTTCCCGATTAGCTTCATaGATAGGAATAAGTACTTTG +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLSRLAS*IGISTL
Trigger: CAAAGTACTTATTCCTATTCATGAAGCTAATCGGGA...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTTTTTGTCGAAATAGGTaGTTCTGTCCTTCATCTCAT +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLFCRNR*FCPSSH
Trigger: ATGAGATGAAGGACAGAATCACCTATTTCGACAAAA...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
36% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTATGATCTCTTCTTTATaGGTGACATTGACCCTTGTT +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLMISSL*VTLTLV
Trigger: AACAAGGGTCAATGTCACTCATAAAGAAGAGATCAT...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR TCA 90 bp GAACATATAAAGAACTCCTACAACTCAATGCCAAGAAGGTTAAAACCCCATTTAAAACATTATGGCAAGTaGAAGAAGCTAGCCACAAAA +
Preference number: 4 (lower is better)
Translates to: EHIKNSYNSMPRRLKPHLKHYGK*KKLATK
Trigger: TTTTGTGGCTAGCTTCTTTCACTTGCCATAATGTTT...TAAATGGGGTTTTAACCTTCTTGGCATTGAGTTGTAGGAGTTCTTTATATGTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635827.1
CDS-3UTR GCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTTCATCTGGTGATGGATaGAAAGCAAAAAGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLSSGDG*KAKSSL
Trigger: CAAAGAACTTTTTGCTTTGCATCCATCACCAGATGA...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp AAACAAATCTTGAAACAGGATAAAAGCTGGAAGACCCACTCTTCTCAATTTCAATCATCTGGTGATGGATaGAAAGCAAAAAGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: KQILKQDKSWKTHSSQFQSSGDG*KAKSSL
Trigger: CAAAGAACTTTTTGCTTTGCATCCATCACCAGATGA...TTGAAATTGAGAAGAGTGGGTCTTCCAGCTTTTATCCTGTTTCAAGATTTGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635827.1
CDS-3UTR GCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTCATAAATCAGCACACTaGTCTGTCTCTTCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLHKSAH*SVSSSN
Trigger: ATTTGAAGAAGAGACAGAGCAGTGTGCTGATTTATG...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTGTAAACTTCATTAACTaGTTCATACATGCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLVNFIN*FIHASH
Trigger: ATGGCTGGCATGTATGAAGCAGTTAATGAAGTTTAC...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp AAGCATTGGTATCCATGTATATCCAACTGGTGTTTCAAGAGGAGTATTTTGTTTACAGTCTCTAACATGTaGATCCATTTCACTTTCTTC +
Preference number: 4 (lower is better)
Translates to: KHWYPCISNWCFKRSILFTVSNM*IHFTFF
Trigger: GAAGAAAGTGAAATGGATCCACATGTTAGAGACTGT...AAACAAAATACTCCTCTTGAAACACCAGTTGGATATACATGGATACCAATGCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTTCTGTAAGTAGTGTTTaGAACATAAACATCCCTTGC +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLSVSSV*NINIPC
Trigger: GCAAGGGATGTTTATGTTCCAAACACTACTTACAGA...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTCCATGTATATCCAACTaGTGTTTCAAGAGGAGTATT +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLPCISN*CFKRSI
Trigger: AATACTCCTCTTGAAACACCAGTTGGATATACATGG...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTTCCATTCTGAAGCATTaGTATCCATGTATATCCAAC +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLSILKH*YPCISN
Trigger: GTTGGATATACATGGATACCAATGCTTCAGAATGGA...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTAGTCCCAGATATATCTaGATTGCTATTACTAAGGCT +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLSPRYI*IAITKA
Trigger: AGCCTTAGTAATAGCAATCCAGATATATCTGGGACT...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTATATGTGTCAAAGTATaGCTCCACATAGGTAATCTG +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLICVKV*LHIGNL
Trigger: CAGATTACCTATGTGGAGCCATACTTTGACACATAT...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
3UTR CAA 72 bp AAACTGGACTTTCACTGTTATATTTCTAGCAGAACCTaGACGATTGGCAAAATTAAGACTCTGAGGGTATAT +
Preference number: 4 (lower is better)
Translates to: KLDFHCYISSRT*TIGKIKTLRVY
Trigger: ATATACCCTCAGAGTCTTAATTTTGCCAATCGTCAAGGTTCTGCTAGAAATATAACAGTGAAAGTCCAGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614472.5
CDS-3UTR GCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTTTTTCTGATGACAATTaGCCAGTCTTCTGTATAACT +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLFSDDN*PVFCIT
Trigger: AGTTATACAGAAGACTGGGCAATTGTCATCAGAAAA...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
34% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTATCATTGAGAAAGAATaGAAGGCTTGTATTGAGTCT +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLIIEKE*KACIES
Trigger: AGACTCAATACAAGCCTTGCATTCTTTCTCAATGAT...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR GCA 90 bp CATATTTGCAATCTTTTGGTCTTGTACATTCGTAGAAAATCCAGAACTCTGAGAATCATTGAGAAAGAATaGAAGGCTTGTATTGAGTCT +
Preference number: 4 (lower is better)
Translates to: HICNLLVLYIRRKSRTLRIIEKE*KACIES
Trigger: AGACTCAATACAAGCCTTGCATTCTTTCTCAATGAT...TCTCAGAGTTCTGGATTTTCTACGAATGTACAAGACCAAAAGATTGCAAATATG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR GCA 90 bp AAACAAATCTTGAAACAGGATAAAAGCTGGAAGACCCACTCTTCTCAATTTCAAAATAATACCAATACATaGTACGACATGGATGAACCT +
Preference number: 4 (lower is better)
Translates to: KQILKQDKSWKTHSSQFQNNTNT*YDMDEP
Trigger: AGGTTCATCCATGTCGTAGCATGTATTGGTATTATT...TTGAAATTGAGAAGAGTGGGTCTTCCAGCTTTTATCCTGTTTCAAGATTTGTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635827.1
CDS-3UTR CCA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTTCAGAAAGAATCATATaGAGATTGAAAACCAGATCC +
Preference number: 4 (lower is better)
Translates to: LSMIFILLGLELVLESTLSERII*RLKTRS
Trigger: GGATCTGGTTTTCAATCTCCATATGATTCTTTCTGA...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp CTCTACGGCCCGGATCCTAACAGGCAGGACAGGTACCTGTCCGCCACCTGGGGAAAGGTTTTTGAGCAGTaGGGGAGAACCACTATATTG +
Preference number: 5 (lower is better)
Translates to: LYGPDPNRQDRYLSATWGKVFEQ*GRTTIL
Trigger: CAATATAGTGGTTCTCCCCAACTGCTCAAAAACCTT...TCCCCAGGTGGCGGACAGGTACCTGTCCTGCCTGTTAGGATCCGGGCCGTAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635827.1
CDS-3UTR CAA 90 bp GCAAAGCTGATTCCCGAACGCTGCCACTGCAAACAACCCACTGCAAAGCCAGCTGGAAACTGCCAGGCCTaGTTAGTTGAGGGACCGATG +
Preference number: 5 (lower is better)
Translates to: AKLIPERCHCKQPTAKPAGNCQA*LVEGPM
Trigger: CATCGGTCCCTCAACTAACAAGGCCTGGCAGTTTCC...AGCTGGCTTTGCAGTGGGTTGTTTGCAGTGGCAGCGTTCGGGAATCAGCTTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS GCA 90 bp AGGTTTTTGAGCAGTTGGGGAGAACCACTATATTGTCCGGAGATCTaGTTCCTAACTTCGGCTGCCACCGTTCTGCTGATCTTCTGGGCG +
Preference number: 5 (lower is better)
Translates to: RFLSSWGEPLYCPEI*FLTSAATVLLIFWA
Trigger: CGCCCAGAAGATCAGCAGAACGGTGGCAGCCGAAGTTAGGAAGCAGATCTCCGGACAATATAGTGGTTCTCCCCAACTGCTCAAAAACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000251157.10
ENST00000340370.10
ENST00000404627.3
ENST00000454575.6
ENST00000634264.1
ENST00000635123.1
ENST00000635253.2
ENST00000637208.1
CDS-3UTR CAA 90 bp ATTTCATGCCAGGTAGAGGAACCTCAGGAGACAGTACAGAATAAGCCTGTGGTGTCGCCGTACCATTTCTaGCCTGGCACCTATGCTCCC +
Preference number: 5 (lower is better)
Translates to: ISCQVEEPQETVQNKPVVSPYHF*PGTYAP
Trigger: GGGAGCATAGGTGCCAGGCAAGAAATGGTACGGCGA...CACCACAGGCTTATTCTGTACTGTCTCCTGAGGTTCCTCTACCTGGCATGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CAA 90 bp TCCCCAATTCGGACTGGGAACAGGTGTTCATCCAGAGCATTGACCAGAGCAAAAGAGACCGGCATGGCATaGCTTGGATCCTCTCCATAC +
Preference number: 5 (lower is better)
Translates to: SPIRTGNRCSSRALTRAKETGMA*LGSSPY
Trigger: GTATGGAGAGGATCCAAGCAATGCCATGCCGGTCTC...TTTTGCTCTGGTCAATGCTCTGGATGAACACCTGTTCCCAGTCCGAATTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000634223.1
ENST00000637208.1
CDS GCA 90 bp ATTGTGTACGTACCGAGCTGTCCTCGGCTTCGCCGTACCATTTCTTaGCTGGCACCTATGCTCCCAAGAATAGCTTCTTCAAGCTTTGCT +
Preference number: 5 (lower is better)
Translates to: IVYVPSCPRLRRTIS*LAPMLPRIASSSFA
Trigger: AGCAAAGCTTGAAGAAGCTATTCTTGGGAGCATAGGTGCCAGGCAAGAAATGGTACGGCGAAGCCGAGGACAGCTCGGTACGTACACAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340370.10
ENST00000635253.2
CDS-3UTR CAA 90 bp TATTTTCCAGAGCAGATACCTTCTTCATCTGGAGATACCACATCATCTGAGACCCCGATGTCCCTGCGATaGCCATGGCAACGGTCTGGC +
Preference number: 5 (lower is better)
Translates to: YFPEQIPSSSGDTTSSETPMSLR*PWQRSG
Trigger: GCCAGACCGTTGCCATGGCAATCGCAGGGACATCGG...GGTCTCAGATGATGTGGTATCTCCAGATGAAGAAGGTATCTGCTCTGGAAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CAA 90 bp GCAAAGCTGATTCCCGAACGCTGCCACTGCAAACAACCCACTGCAAAGCCAGCTAAGCTTCTCTGTGTTTaGACGCCAGTGAGTCATATC +
Preference number: 5 (lower is better)
Translates to: AKLIPERCHCKQPTAKPAKLLCV*TPVSHI
Trigger: GATATGACTCACTGGCGTCAAAACACAGAGAAGCTT...AGCTGGCTTTGCAGTGGGTTGTTTGCAGTGGCAGCGTTCGGGAATCAGCTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CAA 90 bp GCCTGTGGTGGTTTTTCCAATGAGACTGGCAAGCAAAACTGGCCAGTCTTCAACCTTCGTTCTGAGTGCTaGCCTGCCATGTTCTGCAAC +
Preference number: 5 (lower is better)
Translates to: ACGGFSNETGKQNWPVFNLRSEC*PAMFCN
Trigger: GTTGCAGAACATGGCAGGCAAGCACTCAGAACGAAG...GTTGAAGACTGGCCAGTTTTGCTTGCCAGTCTCATTGGAAAAACCACCACAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CAA 90 bp GAGAGTAGCTGGTCGAAAGCTCGTCAAGTTACAAGCATCATCTCCACTTGTTGTGGGCTCGGCATGGCATaGCTTGGATCCTCTCCATAC +
Preference number: 5 (lower is better)
Translates to: ESSWSKARQVTSIISTCCGLGMA*LGSSPY
Trigger: GTATGGAGAGGATCCAAGCAATGCCATGCCGAGCCC...ACAACAAGTGGAGATGATGCTTGTAACTTGACGAGCTTTCGACCAGCTACTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614472.5
CDS-3UTR CAA 90 bp AGACTGGCAAGCAAAACTGGCCAGTCTTCAACCGTCCATTCTGAAGCATTGGTAGAGACCGGCATGGCATaGCTTGGATCCTCTCCATAC +
Preference number: 5 (lower is better)
Translates to: RLASKTGQSSTVHSEALVETGMA*LGSSPY
Trigger: GTATGGAGAGGATCCAAGCAATGCCATGCCGGTCTC...TACCAATGCTTCAGAATGGACGGTTGAAGACTGGCCAGTTTTGCTTGCCAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634223.1
ENST00000637208.1
CDS-3UTR CAA 90 bp TGGCAAGCAAAACTGGCCAGTCTTCAACCGTCCATTCTGAAGCATTGGTATCCAAGGCCCAGCTACCCCTaGGGGTATCATCTATTGACA +
Preference number: 5 (lower is better)
Translates to: WQAKLASLQPSILKHWYPRPSYP*GYHLLT
Trigger: TGTCAATAGATGATACCCCAAGGGGTAGCTGGGCCT...TGGATACCAATGCTTCAGAATGGACGGTTGAAGACTGGCCAGTTTTGCTTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CAA 90 bp AACTGTCGGTATAGGATGGGTGCAGCTGGGGCTCGGCATGGCATTGCTTGGATCGTTCTTTGTGACGGTTaGATTTCCTTTGGTCATCAT +
Preference number: 5 (lower is better)
Translates to: NCRYRMGAAGARHGIAWIVLCDG*ISFGHH
Trigger: ATGATGACCAAAGGAAATCAAACCGTCACAAAGAAC...GATCCAAGCAATGCCATGCCGAGCCCCAGCTGCACCCATCCTATACCGACAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614472.5
CDS-3UTR CAA 90 bp ATGTCCCTGCGATTGCCATGGCAACGGTCTGGCTTATCATACTTCCGCTCTCACGTGTTAACCCAGGAATaGGAGCGATCTAAACCCTTA +
Preference number: 5 (lower is better)
Translates to: MSLRLPWQRSGLSYFRSHVLTQE*ERSKPL
Trigger: TAAGGGTTTAGATCGCTCCAATTCCTGGGTTAACAC...GTGAGAGCGGAAGTATGATAAGCCAGACCGTTGCCATGGCAATCGCAGGGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CAA 90 bp TCAGTTTATCTAGCAGAAGATGAAGAAATCGGACCACTGGTTCCAGCTGGGATGGTGTTGATTCTGCACTaGGACTGGGGTTGGATCCCC +
Preference number: 5 (lower is better)
Translates to: SVYLAEDEEIGPLVPAGMVLILH*DWGWIP
Trigger: GGGGATCCAACCCCAGTCCAAGTGCAGAATCAACAC...CATCCCAGCTGGAACCAGTGGTCCGATTTCTTCATCTTCTGCTAGATAAACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CAA 90 bp ATGTCCCTGCGATTGCCATGGCAACGGTCTGGCTTATCATACTTCCGCTCTCACTTCCCTCTTTCAGAGTaGATCGCCCTGCTCATTATA +
Preference number: 5 (lower is better)
Translates to: MSLRLPWQRSGLSYFRSHFPLSE*IALLII
Trigger: TATAATGAGCAGGGCGATCAACTCTGAAAGAGGGAA...GTGAGAGCGGAAGTATGATAAGCCAGACCGTTGCCATGGCAATCGCAGGGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CAA 90 bp GCAAAGCTGATTCCCGAACGCTGCCACTGCAAACAACCCACTGCAAAGCCAGCTGAACATAAACATCCCTaGCGGGAAACTCTAAGATTT +
Preference number: 5 (lower is better)
Translates to: AKLIPERCHCKQPTAKPAEHKHP*RETLRF
Trigger: AAATCTTAGAGTTTCCCGCAAGGGATGTTTATGTTC...AGCTGGCTTTGCAGTGGGTTGTTTGCAGTGGCAGCGTTCGGGAATCAGCTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CAA 90 bp AACTGTCGGTATAGGATGGGTGCAGCTGGGGCTCGGCATGGCATTGCTTGGATCATTTCTAGCAGAACCTaGACGATTGGCAAAATTAAG +
Preference number: 5 (lower is better)
Translates to: NCRYRMGAAGARHGIAWIISSRT*TIGKIK
Trigger: CTTAATTTTGCCAATCGTCAAGGTTCTGCTAGAAAT...GATCCAAGCAATGCCATGCCGAGCCCCAGCTGCACCCATCCTATACCGACAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614472.5
CDS-3UTR CAA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCCGATGTCCCTGCGATaGCCATGGCAACGGTCTGGC +
Preference number: 5 (lower is better)
Translates to: GLSMIFILLGLELVLESTPMSLR*PWQRSG
Trigger: GCCAGACCGTTGCCATGGCAATCGCAGGGACATCGG...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp TCAGTTTATCTAGCAGAAGATGAAGAAATCGGACCACTGGTTCCAGCTGGGATGTGGCGTGTGACCGTATaGTACCGATGCTACTGCTAC +
Preference number: 5 (lower is better)
Translates to: SVYLAEDEEIGPLVPAGMWRVTV*YRCYCY
Trigger: GTAGCAGTAGCATCGGTACAATACGGTCACACGCCA...CATCCCAGCTGGAACCAGTGGTCCGATTTCTTCATCTTCTGCTAGATAAACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CAA 90 bp GAATTCCTCCTCTCTGACCAAGACCCTTTTCGTTCTCCAGTACTGATTTCTACTAGGCCCAGCTACCCCTaGGGGTATCATCTATTGACA +
Preference number: 5 (lower is better)
Translates to: EFLLSDQDPFRSPVLISTRPSYP*GYHLLT
Trigger: TGTCAATAGATGATACCCCAAGGGGTAGCTGGGCCT...AGTAGAAATCAGTACTGGAGAACGAAAAGGGTCTTGGTCAGAGAGGAGGAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614472.5
CDS-3UTR CAA 90 bp GCAAAGCTGATTCCCGAACGCTGCCACTGCAAACAACCCACTGCAAAGCCAGCTTATTCATTAAATGGATaGCAGTCCAAGCAAAAGGCA +
Preference number: 5 (lower is better)
Translates to: AKLIPERCHCKQPTAKPAYSLNG*QSKQKA
Trigger: TGCCTTTTGCTTGGACTGCAATCCATTTAATGAATA...AGCTGGCTTTGCAGTGGGTTGTTTGCAGTGGCAGCGTTCGGGAATCAGCTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS CCA 90 bp ATCCACAGCCAAAGGATGAGTAATGAGGTAATCTTCCAAATCCACTaGATCTACTGCTTCGGTAAGGGGCACTGTGGTGTGATGGGATAT +
Preference number: 5 (lower is better)
Translates to: IHSQRMSNEVIFQIH*IYCFGKGHCGVMGY
Trigger: ATATCCCATCACACCACAGTGCCCCTTACCGAAGCAGTAGATCCAGTGGATTTGGAAGATTACCTCATTACTCATCCTTTGGCTGTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000251157.10
ENST00000340370.10
ENST00000404627.3
ENST00000454575.6
ENST00000634264.1
ENST00000635123.1
ENST00000635253.2
ENST00000635827.1
ENST00000637208.1
CDS-3UTR CAA 90 bp AAACTGGCCAGTCTTCAACCGTCCATTCTGAAGCATTGGTATCCATGTATATCCGGGAGAACCACTATATaGTCCGGAGATCTGCTTCCT +
Preference number: 5 (lower is better)
Translates to: KLASLQPSILKHWYPCISGRTTI*SGDLLP
Trigger: AGGAAGCAGATCTCCGGACAATATAGTGGTTCTCCC...GGATATACATGGATACCAATGCTTCAGAATGGACGGTTGAAGACTGGCCAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CAA 90 bp GCCTGTGGTGGTTTTTCCAATGAGACTGGCAAGCAAAACTGGCCAGTCTTCAACATGTTTGTAAGAAACTaGACGTCTCTGTGTGCGAAG +
Preference number: 5 (lower is better)
Translates to: ACGGFSNETGKQNWPVFNMFVRN*TSLCAK
Trigger: CTTCGCACACAGAGACGTCAAGTTTCTTACAAACAT...GTTGAAGACTGGCCAGTTTTGCTTGCCAGTCTCATTGGAAAAACCACCACAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CAA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTCCGATGTCCCTGCGATaGCCATGGCAACGGTCTGGC +
Preference number: 5 (lower is better)
Translates to: LSMIFILLGLELVLESTLPMSLR*PWQRSG
Trigger: GCCAGACCGTTGCCATGGCAATCGCAGGGACATCGG...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCTCGCCGTACCATTTCTaGCCTGGCACCTATGCTCCC +
Preference number: 5 (lower is better)
Translates to: GLSMIFILLGLELVLESTSPYHF*PGTYAP
Trigger: GGGAGCATAGGTGCCAGGCAAGAAATGGTACGGCGA...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp ATTTCATGCCAGGTAGAGGAACCTCAGGAGACAGTACAGAATAAGCCTGTGGTGCCACCTCAAATTTTCTaGACTTCCAAAGGCACTTCC +
Preference number: 5 (lower is better)
Translates to: ISCQVEEPQETVQNKPVVPPQIF*TSKGTS
Trigger: GGAAGTGCCTTTGGAAGTCAAGAAAATTTGAGGTGG...CACCACAGGCTTATTCTGTACTGTCTCCTGAGGTTCCTCTACCTGGCATGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CAA 90 bp ATTTCATGCCAGGTAGAGGAACCTCAGGAGACAGTACAGAATAAGCCTGTGGTGAGAGTTCAGGAAACTTaGAAACCAAGGCTCTCTGTG +
Preference number: 5 (lower is better)
Translates to: ISCQVEEPQETVQNKPVVRVQET*KPRLSV
Trigger: CACAGAGAGCCTTGGTTTCAAAGTTTCCTGAACTCT...CACCACAGGCTTATTCTGTACTGTCTCCTGAGGTTCCTCTACCTGGCATGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CAA 90 bp GCAAGCAAAACTGGCCAGTCTTCAACCGTCCATTCTGAAGCATTGGTATCCATGTGTAACCTCAAACTCTaGGGCCTAAGTGATCTTCCT +
Preference number: 5 (lower is better)
Translates to: ASKTGQSSTVHSEALVSMCNLKL*GLSDLP
Trigger: AGGAAGATCACTTAGGCCCAAGAGTTTGAGGTTACA...CATGGATACCAATGCTTCAGAATGGACGGTTGAAGACTGGCCAGTTTTGCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS GCA 90 bp CACTCCTCACAATACAGCTTATTCTTCCTTAGCGATTCTACTTACTaGTTCCACAATCCTCTGGGTGATAAGACTATGTCCGGGACGAAG +
Preference number: 5 (lower is better)
Translates to: HSSQYSLFFLSDSTY*FHNPLGDKTMSGTK
Trigger: CTTCGTCCCGGACATAGTCTTATCACCCAGAGGATTGTGGAAGCAGTAAGTAGAATCGCTAAGGAAGAATAAGCTGTATTGTGAGGAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634495.2
CDS-3UTR CAA 90 bp GCCTGTGGTGGTTTTTCCAATGAGACTGGCAAGCAAAACTGGCCAGTCTTCAACACAATATTAAGGTTTTaGAGCAGTTGGGGAGAACCA +
Preference number: 5 (lower is better)
Translates to: ACGGFSNETGKQNWPVFNTILRF*SSWGEP
Trigger: TGGTTCTCCCCAACTGCTCAAAAACCTTAATATTGT...GTTGAAGACTGGCCAGTTTTGCTTGCCAGTCTCATTGGAAAAACCACCACAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CAA 90 bp ACTAGTGGAATGCTAGTGGAATTTTTGAAGGTGCAGCCAAATTGGAAAACAGTGAGGCCCAGCTACCCCTaGGGGTATCATCTATTGACA +
Preference number: 5 (lower is better)
Translates to: TSGMLVEFLKVQPNWKTVRPSYP*GYHLLT
Trigger: TGTCAATAGATGATACCCCAAGGGGTAGCTGGGCCT...CACTGTTTTCCAATTTGGCTGCACCTTCAAAAATTCCACTAGCATTCCACTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000635827.1
CDS-3UTR CAA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCGGAAACTGCCAGGCCTaGTTAGTTGAGGGACCGATG +
Preference number: 5 (lower is better)
Translates to: GLSMIFILLGLELVLESTGNCQA*LVEGPM
Trigger: CATCGGTCCCTCAACTAACAAGGCCTGGCAGTTTCC...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp TGGCAAGCAAAACTGGCCAGTCTTCAACCGTCCATTCTGAAGCATTGGTATCCAGTTCAATCTCTGCTCTaGATTTGTCAAGCTTCTCTG +
Preference number: 5 (lower is better)
Translates to: WQAKLASLQPSILKHWYPVQSLL*ICQASL
Trigger: CAGAGAAGCTTGACAAATCAAGAGCAGAGATTGAAC...TGGATACCAATGCTTCAGAATGGACGGTTGAAGACTGGCCAGTTTTGCTTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CAA 90 bp TGGCAAGCAAAACTGGCCAGTCTTCAACCGTCCATTCTGAAGCATTGGTATCCAGTCACATTTACCCACTaGACTACCCAAAAGTACTTG +
Preference number: 5 (lower is better)
Translates to: WQAKLASLQPSILKHWYPVTFTH*TTQKYL
Trigger: CAAGTACTTTTGGGTAGTCAAGTGGGTAAATGTGAC...TGGATACCAATGCTTCAGAATGGACGGTTGAAGACTGGCCAGTTTTGCTTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS CCA 90 bp GCTTATTCTTCCTTAGCGATTCTACTTACTGCTTCCACAATCCTCTaGGTGATAAGACTATGTCCGGGACGAAGAAATCCATCTACCATG +
Preference number: 5 (lower is better)
Translates to: AYSSLAILLTASTIL*VIRLCPGRRNPSTM
Trigger: CATGGTAGATGGATTTCTTCGTCCCGGACATAGTCTTATCACCCAGAGGATTGTGGAAGCAGTAAGTAGAATCGCTAAGGAAGAATAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634495.2
CDS-3UTR CAA 90 bp TGGCAAGCAAAACTGGCCAGTCTTCAACCGTCCATTCTGAAGCATTGGTATCCATCTTTTAAGGTCATCTaGATCATCCTGGTAGCTGTT +
Preference number: 5 (lower is better)
Translates to: WQAKLASLQPSILKHWYPSFKVI*IILVAV
Trigger: AACAGCTACCAGGATGATCAAGATGACCTTAAAAGA...TGGATACCAATGCTTCAGAATGGACGGTTGAAGACTGGCCAGTTTTGCTTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CAA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCAGGCCCAGCTACCCCTaGGGGTATCATCTATTGACA +
Preference number: 5 (lower is better)
Translates to: GLSMIFILLGLELVLESTRPSYP*GYHLLT
Trigger: TGTCAATAGATGATACCCCAAGGGGTAGCTGGGCCT...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp CTAGATCCCCTGCATGTGCAGCTCACAATAGGGTTCATGCTCCTACCAGAATCTAGTTTTTCTTTATTCTaGGTGGCATCTGCTTCTTTG +
Preference number: 5 (lower is better)
Translates to: LDPLHVQLTIGFMLLPESSFSLF*VASASL
Trigger: CAAAGAAGCAGATGCCACCAAGAATAAAGAAAAACT...AGATTCTGGTAGGAGCATGAACCCTATTGTGAGCTGCACATGCAGGGGATCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635827.1
CDS-3UTR CAA 90 bp TTCAATGTCAGCCCTATCAAAATCCCAGATGCCTTTGTGCACAAACTGACAGCTGCAAAACTGATCTGCTaGACTCTTCAGTTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: FNVSPIKIPDAFVHKLTAAKLIC*TLQFLQ
Trigger: CTGGAGAAACTGAAGAGTCAAGCAGATCAGTTTTGC...AGCTGTCAGTTTGTGCACAAAGGCATCTGGGATTTTGATAGGGCTGACATTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635827.1
CDS-3UTR CAA 90 bp GTCGCCGTAAGACAGAAGATGGCCTTCTCATATCAGCAAGGAATTTGTAGAGATCATCATCTCCACTTGTaGTCCTTTCAAGTGATCGTC +
Preference number: 5 (lower is better)
Translates to: VAVRQKMAFSYQQGICRDHHLHL*SFQVIV
Trigger: GACGATCACTTGAAAGGACAACAAGTGGAGATGATG...ATCTCTACAAATTCCTTGCTGATATGAGAAGGCCATCTTCTGTCTTACGGCGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614472.5
CDS-3UTR CAA 90 bp CAATCTCTGCTCTTGATTTGTCAAGCTTCTCTGTGTTTTGACGCCAGTGAGTCACATCATCTCCACTTGTaGTCCTTTCAAGTGATCGTC +
Preference number: 5 (lower is better)
Translates to: QSLLLICQASLCFDASESHHLHL*SFQVIV
Trigger: GACGATCACTTGAAAGGACAACAAGTGGAGATGATG...TGACTCACTGGCGTCAAAACACAGAGAAGCTTGACAAATCAAGAGCAGAGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CAA 90 bp TGGCAAGCAAAACTGGCCAGTCTTCAACCGTCCATTCTGAAGCATTGGTATCCAGTCCATTCTGAAGCATaGGTATCCATGTATATCCAA +
Preference number: 5 (lower is better)
Translates to: WQAKLASLQPSILKHWYPVHSEA*VSMYIQ
Trigger: TTGGATATACATGGATACCAATGCTTCAGAATGGAC...TGGATACCAATGCTTCAGAATGGACGGTTGAAGACTGGCCAGTTTTGCTTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634223.1
ENST00000637208.1
CDS-3UTR CAA 90 bp AGACTGGCAAGCAAAACTGGCCAGTCTTCAACCGTCCATTCTGAAGCATTGGTAGTCAAGATAAGGATCTaGTGTATGGATAGACGAAAC +
Preference number: 5 (lower is better)
Translates to: RLASKTGQSSTVHSEALVVKIRI*CMDRRN
Trigger: GTTTCGTCTATCCATACACAAGATCCTTATCTTGAC...TACCAATGCTTCAGAATGGACGGTTGAAGACTGGCCAGTTTTGCTTGCCAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634223.1
ENST00000637208.1
CDS-3UTR CAA 90 bp AGACAGATCAAAAGGCTTCGACTTGATTCTGCTGAAAAGGTAGTGTGTTGCCTGCAGAACTCTGAGATGTaGCAGAAGAAACAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: RQIKRLRLDSAEKVVCCLQNSEM*QKKQKV
Trigger: CACCTTCTGTTTCTTCTGCAACATCTCAGAGTTCTG...CAGGCAACACACTACCTTTTCAGCAGAATCAAGTCGAAGCCTTTTGATCTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CAA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTTCGCCGTACCATTTCTaGCCTGGCACCTATGCTCCC +
Preference number: 5 (lower is better)
Translates to: LSMIFILLGLELVLESTLSPYHF*PGTYAP
Trigger: GGGAGCATAGGTGCCAGGCAAGAAATGGTACGGCGA...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp AGACTGGCAAGCAAAACTGGCCAGTCTTCAACCGTCCATTCTGAAGCATTGGTAATCTCTGCTCTTGATTaGTCAAGCTTCTCTGTGTTT +
Preference number: 5 (lower is better)
Translates to: RLASKTGQSSTVHSEALVISALD*SSFSVF
Trigger: AAACACAGAGAAGCTTGACAAATCAAGAGCAGAGAT...TACCAATGCTTCAGAATGGACGGTTGAAGACTGGCCAGTTTTGCTTGCCAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CAA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCTGGCGTGTGACCGTATaGTACCGATGCTACTGCTAC +
Preference number: 5 (lower is better)
Translates to: GLSMIFILLGLELVLESTWRVTV*YRCYCY
Trigger: GTAGCAGTAGCATCGGTACAATACGGTCACACGCCA...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTCGTTCTGAGTGCTaGCCTGCCATGTTCTGCAAC +
Preference number: 5 (lower is better)
Translates to: GLSMIFILLGLELVLESTLRSEC*PAMFCN
Trigger: GTTGCAGAACATGGCAGGCAAGCACTCAGAACGAAG...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCGGGATCCTGATGTGTaGCAAATGCCAACTCCTGTG +
Preference number: 5 (lower is better)
Translates to: GLSMIFILLGLELVLESTRDPDV*QMPTPV
Trigger: CACAGGAGTTGGCATTTGCAACACATCAGGATCCCG...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCAGGAGGAGAAGCTATaGTGTACGTACCGAGCTGTC +
Preference number: 5 (lower is better)
Translates to: GLSMIFILLGLELVLESTQEEKL*CTYRAV
Trigger: GACAGCTCGGTACGTACACAATAGCTTCTCCTCCTG...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635253.2
CDS-3UTR CAA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCGGGAGAACCACTATATaGTCCGGAGATCTGCTTCCT +
Preference number: 5 (lower is better)
Translates to: GLSMIFILLGLELVLESTGRTTI*SGDLLP
Trigger: AGGAAGCAGATCTCCGGACAATATAGTGGTTCTCCC...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp CAACCGTCCATTCTGAAGCATTGGTATCCATGTATATCCAACTGGTGTTTCAAGGCAAAACTGATCTGCTaGACTCTTCAGTTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: QPSILKHWYPCISNWCFKAKLIC*TLQFLQ
Trigger: CTGGAGAAACTGAAGAGTCAAGCAGATCAGTTTTGC...CTTGAAACACCAGTTGGATATACATGGATACCAATGCTTCAGAATGGACGGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CAA 90 bp CAATCTCTGCTCTTGATTTGTCAAGCTTCTCTGTGTTTTGACGCCAGTGAGTCAAAGCATCATCTCCACTaGTTGTCCTTTCAAGTGATC +
Preference number: 5 (lower is better)
Translates to: QSLLLICQASLCFDASESKHHLH*LSFQVI
Trigger: GATCACTTGAAAGGACAACAAGTGGAGATGATGCTT...TGACTCACTGGCGTCAAAACACAGAGAAGCTTGACAAATCAAGAGCAGAGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CAA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCATTACCGGCATGGCATaGCTTGGATCCTCTCCATAC +
Preference number: 5 (lower is better)
Translates to: GLSMIFILLGLELVLESTITGMA*LGSSPY
Trigger: GTATGGAGAGGATCCAAGCAATGCCATGCCGGTAAT...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTGTGTTGATTCTGCACTaGGACTGGGGTTGGATCCCC +
Preference number: 5 (lower is better)
Translates to: LSMIFILLGLELVLESTLVLILH*DWGWIP
Trigger: GGGGATCCAACCCCAGTCCAAGTGCAGAATCAACAC...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTGGAAACTGCCAGGCCTaGTTAGTTGAGGGACCGATG +
Preference number: 5 (lower is better)
Translates to: LSMIFILLGLELVLESTLGNCQA*LVEGPM
Trigger: CATCGGTCCCTCAACTAACAAGGCCTGGCAGTTTCC...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp TCCGTAAAATCCCTCCAATCTGTGAGATATCTCTGCAAGTTTGGTTATTGCAGGGATATCTCTGCAAGTTaGGTTATTGCAGGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: SVKSLQSVRYLCKFGYCRDISAS*VIAGSL
Trigger: CAAGGAGCCTGCAATAACCAAACTTGCAGAGATATC...CCTGCAATAACCAAACTTGCAGAGATATCTCACAGATTGGAGGGATTTTACGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635088.1
CDS GCA 90 bp GTGGATCCATTTCACTTTCTTCAGGTACAGCTGAAACAAGAGTTCTaGAGTCCCGAGGACTATAAACAACTTCAATATCATCTGGAGGAA +
Preference number: 5 (lower is better)
Translates to: VDPFHFLQVQLKQEF*SPEDYKQLQYHLEE
Trigger: TTCCTCCAGATGATATTGAAGTTGTTTATAGTCCTCGGGACTGCAGAACTCTTGTTTCAGCTGTACCTGAAGAAAGTGAAATGGATCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000251157.10
ENST00000340370.10
ENST00000404627.3
ENST00000454575.6
ENST00000634264.1
ENST00000635123.1
ENST00000635253.2
ENST00000635827.1
ENST00000637208.1
CDS-3UTR CAA 90 bp TTCAATGTCAGCCCTATCAAAATCCCAGATGCCTTTGTGCACAAACTGACAGCTTCTTTTAAGGTCATCTaGATCATCCTGGTAGCTGTT +
Preference number: 5 (lower is better)
Translates to: FNVSPIKIPDAFVHKLTASFKVI*IILVAV
Trigger: AACAGCTACCAGGATGATCAAGATGACCTTAAAAGA...AGCTGTCAGTTTGTGCACAAAGGCATCTGGGATTTTGATAGGGCTGACATTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635827.1
CDS-3UTR CAA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTAGGCCCAGCTACCCCTaGGGGTATCATCTATTGACA +
Preference number: 5 (lower is better)
Translates to: LSMIFILLGLELVLESTLRPSYP*GYHLLT
Trigger: TGTCAATAGATGATACCCCAAGGGGTAGCTGGGCCT...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp CTTGTTGTCCTTTCAAGTGATCGTCTGCCAACAATACTAGAATTCCTCCTCTCTGTTCGATCAAGTAAATaGGGAAGCAAAGCATCAGGA +
Preference number: 5 (lower is better)
Translates to: LVVLSSDRLPTILEFLLSVRSSK*GSKASG
Trigger: TCCTGATGCTTTGCTTCCCAATTTACTTGATCGAAC...AGAGAGGAGGAATTCTAGTATTGTTGGCAGACGATCACTTGAAAGGACAACAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614472.5
CDS-3UTR CAA 90 bp TCCAAACTCCCAGCACTGCTAACAATATTCATTAAATGGATTGCAGTCCAAGCAGCAAAACTGATCTGCTaGACTCTTCAGTTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: SKLPALLTIFIKWIAVQAAKLIC*TLQFLQ
Trigger: CTGGAGAAACTGAAGAGTCAAGCAGATCAGTTTTGC...TGCTTGGACTGCAATCCATTTAATGAATATTGTTAGCAGTGCTGGGAGTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614472.5
CDS-3UTR CAA 90 bp CTTGACGTCTCTGTGTGCGAAGACATACGATTACAACTTCGATCCATAGCCTGTATTTCTAGCAGAACCTaGACGATTGGCAAAATTAAG +
Preference number: 5 (lower is better)
Translates to: LDVSVCEDIRLQLRSIACISSRT*TIGKIK
Trigger: CTTAATTTTGCCAATCGTCAAGGTTCTGCTAGAAAT...ACAGGCTATGGATCGAAGTTGTAATCGTATGTCTTCGCACACAGAGACGTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CAA 90 bp AAACTGGCCAGTCTTCAACCGTCCATTCTGAAGCATTGGTATCCATGTATATCCGTCAAGATAAGGATCTaGTGTATGGATAGACGAAAC +
Preference number: 5 (lower is better)
Translates to: KLASLQPSILKHWYPCISVKIRI*CMDRRN
Trigger: GTTTCGTCTATCCATACACAAGATCCTTATCTTGAC...GGATATACATGGATACCAATGCTTCAGAATGGACGGTTGAAGACTGGCCAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634223.1
ENST00000637208.1
CDS-3UTR CAA 90 bp CAACCGTCCATTCTGAAGCATTGGTATCCATGTATATCCAACTGGTGTTTCAAGCAGTGGCTATACAAATaGGTCTTCCTCGTTGATTGT +
Preference number: 5 (lower is better)
Translates to: QPSILKHWYPCISNWCFKQWLYK*VFLVDC
Trigger: ACAATCAACGAGGAAGACCAATTTGTATAGCCACTG...CTTGAAACACCAGTTGGATATACATGGATACCAATGCTTCAGAATGGACGGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CAA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTTGGCGTGTGACCGTATaGTACCGATGCTACTGCTAC +
Preference number: 5 (lower is better)
Translates to: LSMIFILLGLELVLESTLWRVTV*YRCYCY
Trigger: GTAGCAGTAGCATCGGTACAATACGGTCACACGCCA...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTCTTCGTTCTGAGTGCTaGCCTGCCATGTTCTGCAAC +
Preference number: 5 (lower is better)
Translates to: LSMIFILLGLELVLESTLLRSEC*PAMFCN
Trigger: GTTGCAGAACATGGCAGGCAAGCACTCAGAACGAAG...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp TCCGTAAAATCCCTCCAATCTGTGAGATATCTCTGCAAGTTTGGTTATTGCAGGCTGCAAGTTTGGTTATaGCAGGCTCCTTGTAAACAA +
Preference number: 5 (lower is better)
Translates to: SVKSLQSVRYLCKFGYCRLQVWL*QAPCKQ
Trigger: TTGTTTACAAGGAGCCTGCAATAACCAAACTTGCAG...CCTGCAATAACCAAACTTGCAGAGATATCTCACAGATTGGAGGGATTTTACGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635088.1
CDS-3UTR CAA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTCGGGATCCTGATGTGTaGCAAATGCCAACTCCTGTG +
Preference number: 5 (lower is better)
Translates to: LSMIFILLGLELVLESTLRDPDV*QMPTPV
Trigger: CACAGGAGTTGGCATTTGCAACACATCAGGATCCCG...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCTCTCTCCAGTTCCCTTaGATACTCCTTTTGATCCGG +
Preference number: 5 (lower is better)
Translates to: GLSMIFILLGLELVLESTSLQFP*ILLLIR
Trigger: CCGGATCAAAAGGAGTATCAAAGGGAACTGGAGAGA...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp TATTTTCCAGAGCAGATACCTTCTTCATCTGGAGATACCACATCATCTGAGACCGGGTTTTCCTGTAAGTaGGGGAGCAAGTTATCAATT +
Preference number: 5 (lower is better)
Translates to: YFPEQIPSSSGDTTSSETGFSCK*GSKLSI
Trigger: AATTGATAACTTGCTCCCCAACTTACAGGAAAACCC...GGTCTCAGATGATGTGGTATCTCCAGATGAAGAAGGTATCTGCTCTGGAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS GCA 90 bp TGTCAAACTACTACGGAAGTATGCTTCACGGAAGCACAGTCATATTaGTTCGCCTGCAGGAAAAACTCACTTCATCTTTATTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: CQTTTEVCFTEAQSY*FACRKNSLHLYFFF
Trigger: GAAGAAGAAATAAAGATGAAGTGAGTTTTTCCTGCAGGCGAAGCAATATGACTGTGCTTCCGTGAAGCATACTTCCGTAGTAGTTTGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634495.2
CDS-3UTR CAA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTGGGAGAACCACTATATaGTCCGGAGATCTGCTTCCT +
Preference number: 5 (lower is better)
Translates to: LSMIFILLGLELVLESTLGRTTI*SGDLLP
Trigger: AGGAAGCAGATCTCCGGACAATATAGTGGTTCTCCC...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp CAATCTCTGCTCTTGATTTGTCAAGCTTCTCTGTGTTTTGACGCCAGTGAGTCAAGTTTTTCTTTATTCTaGGTGGCATCTGCTTCTTTG +
Preference number: 5 (lower is better)
Translates to: QSLLLICQASLCFDASESSFSLF*VASASL
Trigger: CAAAGAAGCAGATGCCACCAAGAATAAAGAAAAACT...TGACTCACTGGCGTCAAAACACAGAGAAGCTTGACAAATCAAGAGCAGAGATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CAA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCGCAAAACTGATCTGCTaGACTCTTCAGTTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: GLSMIFILLGLELVLESTAKLIC*TLQFLQ
Trigger: CTGGAGAAACTGAAGAGTCAAGCAGATCAGTTTTGC...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp GAATTCCTCCTCTCTGACCAAGACCCTTTTCGTTCTCCAGTACTGATTTCTACTTATTCATTAAATGGATaGCAGTCCAAGCAAAAGGCA +
Preference number: 5 (lower is better)
Translates to: EFLLSDQDPFRSPVLISTYSLNG*QSKQKA
Trigger: TGCCTTTTGCTTGGACTGCAATCCATTTAATGAATA...AGTAGAAATCAGTACTGGAGAACGAAAAGGGTCTTGGTCAGAGAGGAGGAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614472.5
CDS-3UTR CAA 90 bp TTCAATGTCAGCCCTATCAAAATCCCAGATGCCTTTGTGCACAAACTGACAGCTTATTCATTAAATGGATaGCAGTCCAAGCAAAAGGCA +
Preference number: 5 (lower is better)
Translates to: FNVSPIKIPDAFVHKLTAYSLNG*QSKQKA
Trigger: TGCCTTTTGCTTGGACTGCAATCCATTTAATGAATA...AGCTGTCAGTTTGTGCACAAAGGCATCTGGGATTTTGATAGGGCTGACATTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635827.1
CDS-3UTR CAA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCATCATCTCCACTTGTaGTCCTTTCAAGTGATCGTC +
Preference number: 5 (lower is better)
Translates to: GLSMIFILLGLELVLESTHHLHL*SFQVIV
Trigger: GACGATCACTTGAAAGGACAACAAGTGGAGATGATG...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp CTTGTTGTCCTTTCAAGTGATCGTCTGCCAACAATACTAGAATTCCTCCTCTCTGAACATAAACATCCCTaGCGGGAAACTCTAAGATTT +
Preference number: 5 (lower is better)
Translates to: LVVLSSDRLPTILEFLLSEHKHP*RETLRF
Trigger: AAATCTTAGAGTTTCCCGCAAGGGATGTTTATGTTC...AGAGAGGAGGAATTCTAGTATTGTTGGCAGACGATCACTTGAAAGGACAACAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614472.5
CDS-3UTR CAA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTATTACCGGCATGGCATaGCTTGGATCCTCTCCATAC +
Preference number: 5 (lower is better)
Translates to: LSMIFILLGLELVLESTLITGMA*LGSSPY
Trigger: GTATGGAGAGGATCCAAGCAATGCCATGCCGGTAAT...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCGTGTTAACCCAGGAATaGGAGCGATCTAAACCCTTA +
Preference number: 5 (lower is better)
Translates to: GLSMIFILLGLELVLESTVLTQE*ERSKPL
Trigger: TAAGGGTTTAGATCGCTCCAATTCCTGGGTTAACAC...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCAGAACTCTGAGATGTaGCAGAAGAAACAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: GLSMIFILLGLELVLESTQNSEM*QKKQKV
Trigger: CACCTTCTGTTTCTTCTGCAACATCTCAGAGTTCTG...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCCACCTCAAATTTTCTaGACTTCCAAAGGCACTTCC +
Preference number: 5 (lower is better)
Translates to: GLSMIFILLGLELVLESTPPQIF*TSKGTS
Trigger: GGAAGTGCCTTTGGAAGTCAAGAAAATTTGAGGTGG...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCAAGCTTCTCTGTGTTTaGACGCCAGTGAGTCATATC +
Preference number: 5 (lower is better)
Translates to: GLSMIFILLGLELVLESTKLLCV*TPVSHI
Trigger: GATATGACTCACTGGCGTCAAAACACAGAGAAGCTT...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCCAAGAATGCTCTCTTaGGATTCCGTTACAGAAACG +
Preference number: 5 (lower is better)
Translates to: GLSMIFILLGLELVLESTPRMLS*DSVTET
Trigger: CGTTTCTGTAACGGAATCCAAAGAGAGCATTCTTGG...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp CATTCTGAAGCATTGGTATCCATGTATATCCAACTGGTGTTTCAAGAGGAGTATCCAAGAATGCTCTCTTaGGATTCCGTTACAGAAACG +
Preference number: 5 (lower is better)
Translates to: HSEALVSMYIQLVFQEEYPRMLS*DSVTET
Trigger: CGTTTCTGTAACGGAATCCAAAGAGAGCATTCTTGG...ATACTCCTCTTGAAACACCAGTTGGATATACATGGATACCAATGCTTCAGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CAA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCAGAGTTCAGGAAACTTaGAAACCAAGGCTCTCTGTG +
Preference number: 5 (lower is better)
Translates to: GLSMIFILLGLELVLESTRVQET*KPRLSV
Trigger: CACAGAGAGCCTTGGTTTCAAAGTTTCCTGAACTCT...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCGATATCTCTGCAAGTTaGGTTATTGCAGGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: GLSMIFILLGLELVLESTDISAS*VIAGSL
Trigger: CAAGGAGCCTGCAATAACCAAACTTGCAGAGATATC...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp AAACAAATCTTGAAACAGGATAAAAGCTGGAAGACCCACTCTTCTCAATTTCAATTGTTTAGGGACAGGTaGCAAGACTCTGGGGGAATG +
Preference number: 5 (lower is better)
Translates to: KQILKQDKSWKTHSSQFQLFRDR*QDSGGM
Trigger: CATTCCCCCAGAGTCTTGCAACCTGTCCCTAAACAA...TTGAAATTGAGAAGAGTGGGTCTTCCAGCTTTTATCCTGTTTCAAGATTTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635827.1
CDS-3UTR CAA 90 bp ATCTTGAAACAGGATAAAAGCTGGAAGACCCACTCTTCTCAATTTCAAAACTTAGAAGGTGCAGCCAAATaGGAAAACAGTGTGGCAGTC +
Preference number: 5 (lower is better)
Translates to: ILKQDKSWKTHSSQFQNLEGAAK*ENSVAV
Trigger: GACTGCCACACTGTTTTCCAATTTGGCTGCACCTTC...TAAGTTTTGAAATTGAGAAGAGTGGGTCTTCCAGCTTTTATCCTGTTTCAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635827.1
CDS-3UTR CAA 90 bp ATCTTGAAACAGGATAAAAGCTGGAAGACCCACTCTTCTCAATTTCAAAACTTATTTCCACAGATGGGGTaGTGGGGATCGTTTCAGGAT +
Preference number: 5 (lower is better)
Translates to: ILKQDKSWKTHSSQFQNLFPQMG*WGSFQD
Trigger: ATCCTGAAACGATCCCCACAACCCCATCTGTGGAAA...TAAGTTTTGAAATTGAGAAGAGTGGGTCTTCCAGCTTTTATCCTGTTTCAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000635827.1
CDS-3UTR CAA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCAAGGTTTTTGAGCAGTaGGGGAGAACCACTATATTG +
Preference number: 5 (lower is better)
Translates to: GLSMIFILLGLELVLESTKVFEQ*GRTTIL
Trigger: CAATATAGTGGTTCTCCCCAACTGCTCAAAAACCTT...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp ACTAGTGGAATGCTAGTGGAATTTTTGAAGGTGCAGCCAAATTGGAAAACAGTGACAATATTAAGGTTTTaGAGCAGTTGGGGAGAACCA +
Preference number: 5 (lower is better)
Translates to: TSGMLVEFLKVQPNWKTVTILRF*SSWGEP
Trigger: TGGTTCTCCCCAACTGCTCAAAAACCTTAATATTGT...CACTGTTTTCCAATTTGGCTGCACCTTCAAAAATTCCACTAGCATTCCACTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000635827.1
CDS-3UTR CAA 90 bp TCCAAACTCCCAGCACTGCTAACAATATTCATTAAATGGATTGCAGTCCAAGCATCTTTTAAGGTCATCTaGATCATCCTGGTAGCTGTT +
Preference number: 5 (lower is better)
Translates to: SKLPALLTIFIKWIAVQASFKVI*IILVAV
Trigger: AACAGCTACCAGGATGATCAAGATGACCTTAAAAGA...TGCTTGGACTGCAATCCATTTAATGAATATTGTTAGCAGTGCTGGGAGTTTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614472.5
CDS-3UTR CAA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCGTTCGATCAAGTAAATaGGGAAGCAAAGCATCAGGA +
Preference number: 5 (lower is better)
Translates to: GLSMIFILLGLELVLESTVRSSK*GSKASG
Trigger: TCCTGATGCTTTGCTTCCCAATTTACTTGATCGAAC...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp CAACCGTCCATTCTGAAGCATTGGTATCCATGTATATCCAACTGGTGTTTCAAGATTTCTAGCAGAACCTaGACGATTGGCAAAATTAAG +
Preference number: 5 (lower is better)
Translates to: QPSILKHWYPCISNWCFKISSRT*TIGKIK
Trigger: CTTAATTTTGCCAATCGTCAAGGTTCTGCTAGAAAT...CTTGAAACACCAGTTGGATATACATGGATACCAATGCTTCAGAATGGACGGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634223.1
ENST00000637208.1
CDS-3UTR CAA 90 bp AAAGTATCAGTTTATCTAGCAGAAGATGAAGAAATCGGACCACTGGTTCCAGCTAATGCAAGGCTTGTATaGAGTCTCTCAACCATTTCT +
Preference number: 5 (lower is better)
Translates to: KVSVYLAEDEEIGPLVPANARLV*SLSTIS
Trigger: AGAAATGGTTGAGAGACTCAATACAAGCCTTGCATT...AGCTGGAACCAGTGGTCCGATTTCTTCATCTTCTGCTAGATAAACTGATACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CAA 90 bp CAACCGTCCATTCTGAAGCATTGGTATCCATGTATATCCAACTGGTGTTTCAAGAATTGGTCTTCCTCGTaGATTGTGAGTTTCTGTAAA +
Preference number: 5 (lower is better)
Translates to: QPSILKHWYPCISNWCFKNWSSS*IVSFCK
Trigger: TTTACAGAAACTCACAATCAACGAGGAAGACCAATT...CTTGAAACACCAGTTGGATATACATGGATACCAATGCTTCAGAATGGACGGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CAA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCGTTCAATCTCTGCTCTaGATTTGTCAAGCTTCTCTG +
Preference number: 5 (lower is better)
Translates to: GLSMIFILLGLELVLESTVQSLL*ICQASL
Trigger: CAGAGAAGCTTGACAAATCAAGAGCAGAGATTGAAC...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTGCAAGTTTGGTTATaGCAGGCTCCTTGTAAACAA +
Preference number: 5 (lower is better)
Translates to: GLSMIFILLGLELVLESTLQVWL*QAPCKQ
Trigger: TTGTTTACAAGGAGCCTGCAATAACCAAACTTGCAG...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTTCTCTCCAGTTCCCTTaGATACTCCTTTTGATCCGG +
Preference number: 5 (lower is better)
Translates to: LSMIFILLGLELVLESTLSLQFP*ILLLIR
Trigger: CCGGATCAAAAGGAGTATCAAAGGGAACTGGAGAGA...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCACAATATTAAGGTTTTaGAGCAGTTGGGGAGAACCA +
Preference number: 5 (lower is better)
Translates to: GLSMIFILLGLELVLESTTILRF*SSWGEP
Trigger: TGGTTCTCCCCAACTGCTCAAAAACCTTAATATTGT...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCTCTTTTAAGGTCATCTaGATCATCCTGGTAGCTGTT +
Preference number: 5 (lower is better)
Translates to: GLSMIFILLGLELVLESTSFKVI*IILVAV
Trigger: AACAGCTACCAGGATGATCAAGATGACCTTAAAAGA...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCGTTCTTTGTGACGGTTaGATTTCCTTTGGTCATCAT +
Preference number: 5 (lower is better)
Translates to: GLSMIFILLGLELVLESTVLCDG*ISFGHH
Trigger: ATGATGACCAAAGGAAATCAAACCGTCACAAAGAAC...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp TCCAAACTCCCAGCACTGCTAACAATATTCATTAAATGGATTGCAGTCCAAGCAAGTTTTTCTTTATTCTaGGTGGCATCTGCTTCTTTG +
Preference number: 5 (lower is better)
Translates to: SKLPALLTIFIKWIAVQASFSLF*VASASL
Trigger: CAAAGAAGCAGATGCCACCAAGAATAAAGAAAAACT...TGCTTGGACTGCAATCCATTTAATGAATATTGTTAGCAGTGCTGGGAGTTTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614472.5
CDS-3UTR CAA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTGCAAAACTGATCTGCTaGACTCTTCAGTTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: LSMIFILLGLELVLESTLAKLIC*TLQFLQ
Trigger: CTGGAGAAACTGAAGAGTCAAGCAGATCAGTTTTGC...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCATATTTCCCAAGTCTTaGGCAAAACTGATCTGCTTG +
Preference number: 5 (lower is better)
Translates to: GLSMIFILLGLELVLESTIFPKS*AKLICL
Trigger: CAAGCAGATCAGTTTTGCCAAAGACTTGGGAAATAT...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTCATCATCTCCACTTGTaGTCCTTTCAAGTGATCGTC +
Preference number: 5 (lower is better)
Translates to: LSMIFILLGLELVLESTLHHLHL*SFQVIV
Trigger: GACGATCACTTGAAAGGACAACAAGTGGAGATGATG...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCGAACATAAACATCCCTaGCGGGAAACTCTAAGATTT +
Preference number: 5 (lower is better)
Translates to: GLSMIFILLGLELVLESTEHKHP*RETLRF
Trigger: AAATCTTAGAGTTTCCCGCAAGGGATGTTTATGTTC...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCGTCCATTCTGAAGCATaGGTATCCATGTATATCCAA +
Preference number: 5 (lower is better)
Translates to: GLSMIFILLGLELVLESTVHSEA*VSMYIQ
Trigger: TTGGATATACATGGATACCAATGCTTCAGAATGGAC...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCCAGATATATCTGGATaGCTATTACTAAGGCTTCGA +
Preference number: 5 (lower is better)
Translates to: GLSMIFILLGLELVLESTPDISG*LLLRLR
Trigger: TCGAAGCCTTAGTAATAGCAATCCAGATATATCTGG...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTGTGTTAACCCAGGAATaGGAGCGATCTAAACCCTTA +
Preference number: 5 (lower is better)
Translates to: LSMIFILLGLELVLESTLVLTQE*ERSKPL
Trigger: TAAGGGTTTAGATCGCTCCAATTCCTGGGTTAACAC...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCAATGCAAGGCTTGTATaGAGTCTCTCAACCATTTCT +
Preference number: 5 (lower is better)
Translates to: GLSMIFILLGLELVLESTNARLV*SLSTIS
Trigger: AGAAATGGTTGAGAGACTCAATACAAGCCTTGCATT...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTCCACCTCAAATTTTCTaGACTTCCAAAGGCACTTCC +
Preference number: 5 (lower is better)
Translates to: LSMIFILLGLELVLESTLPPQIF*TSKGTS
Trigger: GGAAGTGCCTTTGGAAGTCAAGAAAATTTGAGGTGG...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTAAGCTTCTCTGTGTTTaGACGCCAGTGAGTCATATC +
Preference number: 5 (lower is better)
Translates to: LSMIFILLGLELVLESTLKLLCV*TPVSHI
Trigger: GATATGACTCACTGGCGTCAAAACACAGAGAAGCTT...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCATCTCTGCTCTTGATTaGTCAAGCTTCTCTGTGTTT +
Preference number: 5 (lower is better)
Translates to: GLSMIFILLGLELVLESTISALD*SSFSVF
Trigger: AAACACAGAGAAGCTTGACAAATCAAGAGCAGAGAT...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTCCAAGAATGCTCTCTTaGGATTCCGTTACAGAAACG +
Preference number: 5 (lower is better)
Translates to: LSMIFILLGLELVLESTLPRMLS*DSVTET
Trigger: CGTTTCTGTAACGGAATCCAAAGAGAGCATTCTTGG...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTAGAGTTCAGGAAACTTaGAAACCAAGGCTCTCTGTG +
Preference number: 5 (lower is better)
Translates to: LSMIFILLGLELVLESTLRVQET*KPRLSV
Trigger: CACAGAGAGCCTTGGTTTCAAAGTTTCCTGAACTCT...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTGATATCTCTGCAAGTTaGGTTATTGCAGGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: LSMIFILLGLELVLESTLDISAS*VIAGSL
Trigger: CAAGGAGCCTGCAATAACCAAACTTGCAGAGATATC...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCACAGGATTAGAGTCTTaGATTACTTCAACCACATCC +
Preference number: 5 (lower is better)
Translates to: GLSMIFILLGLELVLESTTGLES*ITSTTS
Trigger: GGATGTGGTTGAAGTAATCAAAGACTCTAATCCTGT...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCTTTTCACACTCGATGTaGAATACATGGCTCTTTGCA +
Preference number: 5 (lower is better)
Translates to: GLSMIFILLGLELVLESTFSHSM*NTWLFA
Trigger: TGCAAAGAGCCATGTATTCAACATCGAGTGTGAAAA...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTGTTCGATCAAGTAAATaGGGAAGCAAAGCATCAGGA +
Preference number: 5 (lower is better)
Translates to: LSMIFILLGLELVLESTLVRSSK*GSKASG
Trigger: TCCTGATGCTTTGCTTCCCAATTTACTTGATCGAAC...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp GAACATATAAAGAACTCCTACAACTCAATGCCAAGAAGGTTAAAACCCCATTTAGTTCGATCAAGTAAATaGGGAAGCAAAGCATCAGGA +
Preference number: 5 (lower is better)
Translates to: EHIKNSYNSMPRRLKPHLVRSSK*GSKASG
Trigger: TCCTGATGCTTTGCTTCCCAATTTACTTGATCGAAC...TAAATGGGGTTTTAACCTTCTTGGCATTGAGTTGTAGGAGTTCTTTATATGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635827.1
CDS-3UTR CAA 90 bp AAGCATTGGTATCCATGTATATCCAACTGGTGTTTCAAGAGGAGTATTTTGTTTGTTCGATCAAGTAAATaGGGAAGCAAAGCATCAGGA +
Preference number: 5 (lower is better)
Translates to: KHWYPCISNWCFKRSILFVRSSK*GSKASG
Trigger: TCCTGATGCTTTGCTTCCCAATTTACTTGATCGAAC...AAACAAAATACTCCTCTTGAAACACCAGTTGGATATACATGGATACCAATGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CAA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCAGTTTTTCTTTATTCTaGGTGGCATCTGCTTCTTTG +
Preference number: 5 (lower is better)
Translates to: GLSMIFILLGLELVLESTSFSLF*VASASL
Trigger: CAAAGAAGCAGATGCCACCAAGAATAAAGAAAAACT...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCTATTCATTAAATGGATaGCAGTCCAAGCAAAAGGCA +
Preference number: 5 (lower is better)
Translates to: GLSMIFILLGLELVLESTYSLNG*QSKQKA
Trigger: TGCCTTTTGCTTGGACTGCAATCCATTTAATGAATA...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTAAGCATCATCTCCACTaGTTGTCCTTTCAAGTGATC +
Preference number: 5 (lower is better)
Translates to: LSMIFILLGLELVLESTLKHHLH*LSFQVI
Trigger: GATCACTTGAAAGGACAACAAGTGGAGATGATGCTT...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCATTTCTAGCAGAACCTaGACGATTGGCAAAATTAAG +
Preference number: 5 (lower is better)
Translates to: GLSMIFILLGLELVLESTISSRT*TIGKIK
Trigger: CTTAATTTTGCCAATCGTCAAGGTTCTGCTAGAAAT...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTATGTTTGTAAGAAACTaGACGTCTCTGTGTGCGAAG +
Preference number: 5 (lower is better)
Translates to: LSMIFILLGLELVLESTLMFVRN*TSLCAK
Trigger: CTTCGCACACAGAGACGTCAAGTTTCTTACAAACAT...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCAATTGGTCTTCCTCGTaGATTGTGAGTTTCTGTAAA +
Preference number: 5 (lower is better)
Translates to: GLSMIFILLGLELVLESTNWSSS*IVSFCK
Trigger: TTTACAGAAACTCACAATCAACGAGGAAGACCAATT...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTCAGTGGCTATACAAATaGGTCTTCCTCGTTGATTGT +
Preference number: 5 (lower is better)
Translates to: LSMIFILLGLELVLESTLQWLYK*VFLVDC
Trigger: ACAATCAACGAGGAAGACCAATTTGTATAGCCACTG...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTGTTCAATCTCTGCTCTaGATTTGTCAAGCTTCTCTG +
Preference number: 5 (lower is better)
Translates to: LSMIFILLGLELVLESTLVQSLL*ICQASL
Trigger: CAGAGAAGCTTGACAAATCAAGAGCAGAGATTGAAC...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTCTGCAAGTTTGGTTATaGCAGGCTCCTTGTAAACAA +
Preference number: 5 (lower is better)
Translates to: LSMIFILLGLELVLESTLLQVWL*QAPCKQ
Trigger: TTGTTTACAAGGAGCCTGCAATAACCAAACTTGCAG...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp GGGCTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCGGATCTAATTTACACTaGTCTACAGGATTAGAGTCT +
Preference number: 5 (lower is better)
Translates to: GLSMIFILLGLELVLESTGSNLH*STGLES
Trigger: AGACTCTAATCCTGTAGACAAGTGTAAATTAGATCC...GGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAGCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp GAACATATAAAGAACTCCTACAACTCAATGCCAAGAAGGTTAAAACCCCATTTAATGCTAGTGGAATTTTaGAAGGTGCAGCCAAATTGG +
Preference number: 5 (lower is better)
Translates to: EHIKNSYNSMPRRLKPHLMLVEF*KVQPNW
Trigger: CCAATTTGGCTGCACCTTCAAAAATTCCACTAGCAT...TAAATGGGGTTTTAACCTTCTTGGCATTGAGTTGTAGGAGTTCTTTATATGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635827.1
CDS-3UTR CAA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTACAATATTAAGGTTTTaGAGCAGTTGGGGAGAACCA +
Preference number: 5 (lower is better)
Translates to: LSMIFILLGLELVLESTLTILRF*SSWGEP
Trigger: TGGTTCTCCCCAACTGCTCAAAAACCTTAATATTGT...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTTCTTTTAAGGTCATCTaGATCATCCTGGTAGCTGTT +
Preference number: 5 (lower is better)
Translates to: LSMIFILLGLELVLESTLSFKVI*IILVAV
Trigger: AACAGCTACCAGGATGATCAAGATGACCTTAAAAGA...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTGTTCTTTGTGACGGTTaGATTTCCTTTGGTCATCAT +
Preference number: 5 (lower is better)
Translates to: LSMIFILLGLELVLESTLVLCDG*ISFGHH
Trigger: ATGATGACCAAAGGAAATCAAACCGTCACAAAGAAC...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp GAACATATAAAGAACTCCTACAACTCAATGCCAAGAAGGTTAAAACCCCATTTAGTTCTTTGTGACGGTTaGATTTCCTTTGGTCATCAT +
Preference number: 5 (lower is better)
Translates to: EHIKNSYNSMPRRLKPHLVLCDG*ISFGHH
Trigger: ATGATGACCAAAGGAAATCAAACCGTCACAAAGAAC...TAAATGGGGTTTTAACCTTCTTGGCATTGAGTTGTAGGAGTTCTTTATATGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635827.1
CDS-3UTR CAA 90 bp AAGCATTGGTATCCATGTATATCCAACTGGTGTTTCAAGAGGAGTATTTTGTTTGTTCTTTGTGACGGTTaGATTTCCTTTGGTCATCAT +
Preference number: 5 (lower is better)
Translates to: KHWYPCISNWCFKRSILFVLCDG*ISFGHH
Trigger: ATGATGACCAAAGGAAATCAAACCGTCACAAAGAAC...AAACAAAATACTCCTCTTGAAACACCAGTTGGATATACATGGATACCAATGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CAA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTATATTTCCCAAGTCTTaGGCAAAACTGATCTGCTTG +
Preference number: 5 (lower is better)
Translates to: LSMIFILLGLELVLESTLIFPKS*AKLICL
Trigger: CAAGCAGATCAGTTTTGCCAAAGACTTGGGAAATAT...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp ATCTTGAAACAGGATAAAAGCTGGAAGACCCACTCTTCTCAATTTCAAAACTTAATATTTCCCAAGTCTTaGGCAAAACTGATCTGCTTG +
Preference number: 5 (lower is better)
Translates to: ILKQDKSWKTHSSQFQNLIFPKS*AKLICL
Trigger: CAAGCAGATCAGTTTTGCCAAAGACTTGGGAAATAT...TAAGTTTTGAAATTGAGAAGAGTGGGTCTTCCAGCTTTTATCCTGTTTCAAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635827.1
CDS-3UTR CAA 90 bp TCCATGTATATCCAACTGGTGTTTCAAGAGGAGTATTTTGTTTTTGTTGACAACATATTTCCCAAGTCTTaGGCAAAACTGATCTGCTTG +
Preference number: 5 (lower is better)
Translates to: SMYIQLVFQEEYFVFVDNIFPKS*AKLICL
Trigger: CAAGCAGATCAGTTTTGCCAAAGACTTGGGAAATAT...GTTGTCAACAAAAACAAAATACTCCTCTTGAAACACCAGTTGGATATACATGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CAA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTGAACATAAACATCCCTaGCGGGAAACTCTAAGATTT +
Preference number: 5 (lower is better)
Translates to: LSMIFILLGLELVLESTLEHKHP*RETLRF
Trigger: AAATCTTAGAGTTTCCCGCAAGGGATGTTTATGTTC...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTGTCCATTCTGAAGCATaGGTATCCATGTATATCCAA +
Preference number: 5 (lower is better)
Translates to: LSMIFILLGLELVLESTLVHSEA*VSMYIQ
Trigger: TTGGATATACATGGATACCAATGCTTCAGAATGGAC...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp CATATTTGCAATCTTTTGGTCTTGTACATTCGTAGAAAATCCAGAACTCTGAGAGTCCATTCTGAAGCATaGGTATCCATGTATATCCAA +
Preference number: 5 (lower is better)
Translates to: HICNLLVLYIRRKSRTLRVHSEA*VSMYIQ
Trigger: TTGGATATACATGGATACCAATGCTTCAGAATGGAC...TCTCAGAGTTCTGGATTTTCTACGAATGTACAAGACCAAAAGATTGCAAATATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CAA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTGTCAAGATAAGGATCTaGTGTATGGATAGACGAAAC +
Preference number: 5 (lower is better)
Translates to: LSMIFILLGLELVLESTLVKIRI*CMDRRN
Trigger: GTTTCGTCTATCCATACACAAGATCCTTATCTTGAC...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp AACAACTTCAACATTAAAAACACCTTTGTGATTATCTACCCATTTCATGCCAGGCCAGATATATCTGGATaGCTATTACTAAGGCTTCGA +
Preference number: 5 (lower is better)
Translates to: NNFNIKNTFVIIYPFHARPDISG*LLLRLR
Trigger: TCGAAGCCTTAGTAATAGCAATCCAGATATATCTGG...CCTGGCATGAAATGGGTAGATAATCACAAAGGTGTTTTTAATGTTGAAGTTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS-3UTR CAA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTAATGCAAGGCTTGTATaGAGTCTCTCAACCATTTCT +
Preference number: 5 (lower is better)
Translates to: LSMIFILLGLELVLESTLNARLV*SLSTIS
Trigger: AGAAATGGTTGAGAGACTCAATACAAGCCTTGCATT...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTACAGGATTAGAGTCTTaGATTACTTCAACCACATCC +
Preference number: 5 (lower is better)
Translates to: LSMIFILLGLELVLESTLTGLES*ITSTTS
Trigger: GGATGTGGTTGAAGTAATCAAAGACTCTAATCCTGT...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS TCA 90 bp TCACACCTTTTAGTAAAATCTTTAAAGCAGAGTCGCAGTTTATTATaGTGTCTGAAGAGCTTTGGGTCACTAGGTATTTCAGACAGAAAA +
Preference number: 5 (lower is better)
Translates to: SHLLVKSLKQSRSLL*CLKSFGSLGISDRK
Trigger: TTTTCTGTCTGAAATACCTAGTGACCCAAAGCTCTTCAGACATCATAATAAACTGCGACTCTGCTTTAAAGATTTTACTAAAAGGTGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000251157.10
ENST00000340370.10
ENST00000454575.6
ENST00000634264.1
ENST00000634495.2
ENST00000635123.1
ENST00000635253.2
ENST00000635983.1
ENST00000637255.1
CDS GCA 90 bp AATCTATCAGTATATACTCTGACTACGCTTCTGACTTACAACCTGTaGAATGGTTGTTGTTCCTTTTTCCTAATTGTTCTTCTCACAAAT +
Preference number: 5 (lower is better)
Translates to: NLSVYTLTTLLTYNL*NGCCSFFLIVLLTN
Trigger: ATTTGTGAGAAGAACAATTAGGAAAAAGGAACAACAACCATTGCACAGGTTGTAAGTCAGAAGCGTAGTCAGAGTATATACTGATAGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635983.1
CDS-3UTR CAA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTAGTTTTTCTTTATTCTaGGTGGCATCTGCTTCTTTG +
Preference number: 5 (lower is better)
Translates to: LSMIFILLGLELVLESTLSFSLF*VASASL
Trigger: CAAAGAAGCAGATGCCACCAAGAATAAAGAAAAACT...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTTATTCATTAAATGGATaGCAGTCCAAGCAAAAGGCA +
Preference number: 5 (lower is better)
Translates to: LSMIFILLGLELVLESTLYSLNG*QSKQKA
Trigger: TGCCTTTTGCTTGGACTGCAATCCATTTAATGAATA...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTATTTCTAGCAGAACCTaGACGATTGGCAAAATTAAG +
Preference number: 5 (lower is better)
Translates to: LSMIFILLGLELVLESTLISSRT*TIGKIK
Trigger: CTTAATTTTGCCAATCGTCAAGGTTCTGCTAGAAAT...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTAATTGGTCTTCCTCGTaGATTGTGAGTTTCTGTAAA +
Preference number: 5 (lower is better)
Translates to: LSMIFILLGLELVLESTLNWSSS*IVSFCK
Trigger: TTTACAGAAACTCACAATCAACGAGGAAGACCAATT...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp CTATCTATGATTTTTATTCTGCTAGGTTTGGAACTAGTTCTTGAGTCAACCCTTGGATCTAATTTACACTaGTCTACAGGATTAGAGTCT +
Preference number: 5 (lower is better)
Translates to: LSMIFILLGLELVLESTLGSNLH*STGLES
Trigger: AGACTCTAATCCTGTAGACAAGTGTAAATTAGATCC...AAGGGTTGACTCAAGAACTAGTTCCAAACCTAGCAGAATAAAAATCATAGATAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251157.10
ENST00000454575.6
ENST00000635253.2
CDS-3UTR CAA 90 bp AACAACTTCAACATTAAAAACACCTTTGTGATTATCTACCCATTTCATGCCAGGCCTGCTCATTATAATTaGCTGTTTCTAATCCTGTTC +
Preference number: 5 (lower is better)
Translates to: NNFNIKNTFVIIYPFHARPAHYN*LFLILF
Trigger: GAACAGGATTAGAAACAGCAAATTATAATGAGCAGG...CCTGGCATGAAATGGGTAGATAATCACAAAGGTGTTTTTAATGTTGAAGTTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637208.1
CDS TCA 72 bp GGGAGGATGCTTCAGCCCAGGAAGTGGAGAATGCAGTaGGCTGAGATTGTACCACTGCAATCCAGCCAGGGC +
Preference number: 6 (lower is better)
Translates to: GRMLQPRKWRMQ*AEIVPLQSSQG
Trigger: GCCCTGGCTGGATTGCAGTGGTACAATCTCAGCTCACTGCATTCTCCACTTCCTGGGCTGAAGCATCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635348.1
CDS GCA 72 bp ACTATATTGTCCGGAGATCTGCTTCCTAACTTCGGCTaGCACCGTTCTGCTGATCTTCTGGGCGAAGGCGCG +
Preference number: 6 (lower is better)
Translates to: TILSGDLLPNFG*HRSADLLGEGA
Trigger: CGCGCCTTCGCCCAGAAGATCAGCAGAACGGTGGCAGCCGAAGTTAGGAAGCAGATCTCCGGACAATATAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000251157.10
ENST00000340370.10
ENST00000404627.3
ENST00000454575.6
ENST00000634264.1
ENST00000635123.1
ENST00000635253.2
ENST00000637208.1
CDS CAA 72 bp CGTACCGAGCTGTCCTCGGCTTCGCCGTACCATTTCTaGCCTGGCACCTATGCTCCCAAGAATAGCTTCTTC +
Preference number: 6 (lower is better)
Translates to: RTELSSASPYHF*PGTYAPKNSFF
Trigger: GAAGAAGCTATTCTTGGGAGCATAGGTGCCAGGCAAGAAATGGTACGGCGAAGCCGAGGACAGCTCGGTACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340370.10
ENST00000635253.2
CDS CAA 72 bp CACTTCCAGATGGGCTTCTCTCAGGAGGAGAAGCTATaGTGTACGTACCGAGCTGTCCTCGGCTTCGCCGTA +
Preference number: 6 (lower is better)
Translates to: HFQMGFSQEEKL*CTYRAVLGFAV
Trigger: TACGGCGAAGCCGAGGACAGCTCGGTACGTACACAATAGCTTCTCCTCCTGAGAGAAGCCCATCTGGAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340370.10
ENST00000635253.2
CDS GCA 72 bp GTACCGAGCTGTCCTCGGCTTCGCCGTACCATTTCTTaGCTGGCACCTATGCTCCCAAGAATAGCTTCTTCA +
Preference number: 6 (lower is better)
Translates to: VPSCPRLRRTIS*LAPMLPRIASS
Trigger: TGAAGAAGCTATTCTTGGGAGCATAGGTGCCAGGCAAGAAATGGTACGGCGAAGCCGAGGACAGCTCGGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340370.10
ENST00000635253.2
CDS GCA 72 bp AGCAGTTGGGGAGAACCACTATATTGTCCGGAGATCTaGTTCCTAACTTCGGCTGCCACCGTTCTGCTGATC +
Preference number: 6 (lower is better)
Translates to: SSWGEPLYCPEI*FLTSAATVLLI
Trigger: GATCAGCAGAACGGTGGCAGCCGAAGTTAGGAAGCAGATCTCCGGACAATATAGTGGTTCTCCCCAACTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251157.10
ENST00000340370.10
ENST00000404627.3
ENST00000454575.6
ENST00000634264.1
ENST00000635123.1
ENST00000635253.2
ENST00000637208.1
CDS CAA 90 bp TATTGTGTACGTACCGAGCTGTCCTCGGCTTCGCCGTACCATTTCTaGCCTGGCACCTATGCTCCCAAGAATAGCTTCTTCAAGCTTTGC +
Preference number: 6 (lower is better)
Translates to: YCVRTELSSASPYHF*PGTYAPKNSFFKLC
Trigger: GCAAAGCTTGAAGAAGCTATTCTTGGGAGCATAGGTGCCAGGCAAGAAATGGTACGGCGAAGCCGAGGACAGCTCGGTACGTACACAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340370.10
ENST00000635253.2
CDS TCA 72 bp GGTTGTTTAGGGACAGGTTGCAAGACTCTGGGGGAATaGGGAGTGACCACTGCTAATGGGTACAAAAGTGTT +
Preference number: 6 (lower is better)
Translates to: GCLGTGCKTLGE*GVTTANGYKSV
Trigger: AACACTTTTGTACCCATTAGCAGTGGTCACTCCTCATTCCCCCAGAGTCTTGCAACCTGTCCCTAAACAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635827.1
CDS CAA 90 bp GCCAACAATATTAAGGTTTTTGAGCAGTTGGGGAGAACCACTATATaGTCCGGAGATCTGCTTCCTAACTTCGGCTGCCACCGTTCTGCT +
Preference number: 6 (lower is better)
Translates to: ANNIKVFEQLGRTTI*SGDLLPNFGCHRSA
Trigger: AGCAGAACGGTGGCAGCCGAAGTTAGGAAGCAGATCTCCGGACAATATAGTGGTTCTCCCCAACTGCTCAAAAACCTTAATATTGTTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000251157.10
ENST00000340370.10
ENST00000404627.3
ENST00000454575.6
ENST00000634264.1
ENST00000635123.1
ENST00000635253.2
ENST00000637208.1
CDS CCA 72 bp CAAAGGATGAGTAATGAGGTAATCTTCCAAATCCACTaGATCTACTGCTTCGGTAAGGGGCACTGTGGTGTG +
Preference number: 6 (lower is better)
Translates to: QRMSNEVIFQIH*IYCFGKGHCGV
Trigger: CACACCACAGTGCCCCTTACCGAAGCAGTAGATCCAGTGGATTTGGAAGATTACCTCATTACTCATCCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000251157.10
ENST00000340370.10
ENST00000404627.3
ENST00000454575.6
ENST00000634264.1
ENST00000635123.1
ENST00000635253.2
ENST00000635827.1
ENST00000637208.1
CDS CAA 72 bp ATTAAGGTTTTTGAGCAGTTGGGGAGAACCACTATATaGTCCGGAGATCTGCTTCCTAACTTCGGCTGCCAC +
Preference number: 6 (lower is better)
Translates to: IKVFEQLGRTTI*SGDLLPNFGCH
Trigger: GTGGCAGCCGAAGTTAGGAAGCAGATCTCCGGACAATATAGTGGTTCTCCCCAACTGCTCAAAAACCTTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000251157.10
ENST00000340370.10
ENST00000404627.3
ENST00000454575.6
ENST00000634264.1
ENST00000635123.1
ENST00000635253.2
ENST00000637208.1
CDS CAA 90 bp GGACTAATACTGAATACAAAAGTGGATAGTCATACTCCAACTCCTTaGACACTAGCAGCAGTAGGTAACAGTAGGGTAGCACGGGGAAGG +
Preference number: 6 (lower is better)
Translates to: GLILNTKVDSHTPTP*TLAAVGNSRVARGR
Trigger: CCTTCCCCGTGCTACCCTACTGTTACCTACTGCTGCTAGTGTCAAAGGAGTTGGAGTATGACTATCCACTTTTGTATTCAGTATTAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635983.1
CDS GCA 72 bp AGTAATGAGGTAATCTTCCAAATCCACTGGATCTACTaGTTCGGTAAGGGGCACTGTGGTGTGATGGGATAT +
Preference number: 6 (lower is better)
Translates to: SNEVIFQIHWIY*FGKGHCGVMGY
Trigger: ATATCCCATCACACCACAGTGCCCCTTACCGAAGCAGTAGATCCAGTGGATTTGGAAGATTACCTCATTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000251157.10
ENST00000340370.10
ENST00000404627.3
ENST00000454575.6
ENST00000634264.1
ENST00000635123.1
ENST00000635253.2
ENST00000635827.1
ENST00000637208.1
CDS GCA 72 bp CGAACTTGGTTCCATAAAAACCAACACGAAAATAGGTaGCAAACATCCGCTCCCAGCCAGTACTCTGATGAA +
Preference number: 6 (lower is better)
Translates to: RTWFHKNQHENR*QTSAPSQYSDE
Trigger: TTCATCAGAGTACTGGCTGGGAGCGGATGTTTGGCACCTATTTTCGTGTTGGTTTTTATGGAACCAAGTTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251157.10
ENST00000340370.10
ENST00000634264.1
ENST00000635253.2
CDS TCA 72 bp GACGTAGTCAGAATGGTCTTCCTTTTGAATTGTTCATaGAGTTCCCCATGGGCACGGCCATCTAAAGTAAAG +
Preference number: 6 (lower is better)
Translates to: DVVRMVFLLNCS*SSPWARPSKVK
Trigger: CTTTACTTTAGATGGCCGTGCCCATGGGGAACTTCATGAACAATTCAAAAGGAAGACCATTCTGACTACGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000251157.10
ENST00000340370.10
ENST00000454575.6
ENST00000467758.1
ENST00000489185.1
ENST00000634264.1
ENST00000634495.2
ENST00000635123.1
ENST00000635253.2
ENST00000635983.1
ENST00000637255.1
CDS TCA 72 bp AACATGTGGATCCATTTCACTTTCTTCAGGTACAGCTaGAACAAGAGTTCTGCAGTCCCGAGGACTATAAAC +
Preference number: 6 (lower is better)
Translates to: NMWIHFTFFRYS*NKSSAVPRTIN
Trigger: GTTTATAGTCCTCGGGACTGCAGAACTCTTGTTTCAGCTGTACCTGAAGAAAGTGAAATGGATCCACATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000251157.10
ENST00000340370.10
ENST00000404627.3
ENST00000454575.6
ENST00000634264.1
ENST00000635123.1
ENST00000635253.2
ENST00000635827.1
ENST00000637208.1
CDS GCA 72 bp ACTACGGAAGTATGCTTCACGGAAGCACAGTCATATTaGTTCGCCTGCAGGAAAAACTCACTTCATCTTTAT +
Preference number: 6 (lower is better)
Translates to: TTEVCFTEAQSY*FACRKNSLHLY
Trigger: ATAAAGATGAAGTGAGTTTTTCCTGCAGGCGAAGCAATATGACTGTGCTTCCGTGAAGCATACTTCCGTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634495.2
CDS CCA 72 bp GTGACCACTGCTAATGGGTACAAAAGTGTTCCAAGATaGATACAGAAGTATTCTGTAGCAGTGGTTGCAGAA +
Preference number: 6 (lower is better)
Translates to: VTTANGYKSVPR*IQKYSVAVVAE
Trigger: TTCTGCAACCACTGCTACAGAATACTTCTGTATCCATCTTGGAACACTTTTGTACCCATTAGCAGTGGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635827.1
CDS CCA 72 bp AAAGTGGTTTCTAGGTTTGAAGGCAGACTGCATGTATaGGTTCCTTTAAGGGGTGGCAGCAATAGAAATGAT +
Preference number: 6 (lower is better)
Translates to: KVVSRFEGRLHV*VPLRGGSNRND
Trigger: ATCATTTCTATTGCTGCCACCCCTTAAAGGAACCCATACATGCAGTCTGCCTTCAAACCTAGAAACCACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635983.1
CDS CAA 72 bp TACTACGGAAGTATGCTTCACGGAAGCACAGTCATATaGCTTCGCCTGCAGGAAAAACTCACTTCATCTTTA +
Preference number: 6 (lower is better)
Translates to: YYGSMLHGSTVI*LRLQEKLTSSL
Trigger: TAAAGATGAAGTGAGTTTTTCCTGCAGGCGAAGCAATATGACTGTGCTTCCGTGAAGCATACTTCCGTAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634495.2
CDS CAA 72 bp CTGAATACAAAAGTGGATAGTCATACTCCAACTCCTTaGACACTAGCAGCAGTAGGTAACAGTAGGGTAGCA +
Preference number: 6 (lower is better)
Translates to: LNTKVDSHTPTP*TLAAVGNSRVA
Trigger: TGCTACCCTACTGTTACCTACTGCTGCTAGTGTCAAAGGAGTTGGAGTATGACTATCCACTTTTGTATTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635983.1
CDS CAA 90 bp GGTGTGATGGGATATATTGCCAACAATATTAAGGTTTTTGAGCAGTaGGGGAGAACCACTATATTGTCCGGAGATCTGCTTCCTAACTTC +
Preference number: 6 (lower is better)
Translates to: GVMGYIANNIKVFEQ*GRTTILSGDLLPNF
Trigger: GAAGTTAGGAAGCAGATCTCCGGACAATATAGTGGTTCTCCCCAACTGCTCAAAAACCTTAATATTGTTGGCAATATATCCCATCACACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000251157.10
ENST00000340370.10
ENST00000404627.3
ENST00000454575.6
ENST00000634264.1
ENST00000635123.1
ENST00000635253.2
ENST00000637208.1
CDS GCA 72 bp CAATACAGCTTATTCTTCCTTAGCGATTCTACTTACTaGTTCCACAATCCTCTGGGTGATAAGACTATGTCC +
Preference number: 6 (lower is better)
Translates to: QYSLFFLSDSTY*FHNPLGDKTMS
Trigger: GGACATAGTCTTATCACCCAGAGGATTGTGGAAGCAGTAAGTAGAATCGCTAAGGAAGAATAAGCTGTATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634495.2
CDS GCA 72 bp GTATGCTTCACGGAAGCACAGTCATATTGCTTCGCCTaGAGGAAAAACTCACTTCATCTTTATTTCTTCTTC +
Preference number: 6 (lower is better)
Translates to: VCFTEAQSYCFA*RKNSLHLYFFF
Trigger: GAAGAAGAAATAAAGATGAAGTGAGTTTTTCCTGCAGGCGAAGCAATATGACTGTGCTTCCGTGAAGCATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634495.2
CDS CCA 72 bp AAGGTCATCTTGATCATCCTGGTAGCTGTTGCCATCTaGAGCTTCATCAGATTCAAAAACTTGTTTTGGCAA +
Preference number: 6 (lower is better)
Translates to: KVILIILVAVAI*SFIRFKNLFWQ
Trigger: TTGCCAAAACAAGTTTTTGAATCTGATGAAGCTCCAGATGGCAACAGCTACCAGGATGATCAAGATGACCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000251157.10
ENST00000340370.10
ENST00000404627.3
ENST00000454575.6
ENST00000614472.5
ENST00000634264.1
ENST00000635123.1
ENST00000635253.2
ENST00000635827.1
ENST00000637208.1
CDS CAA 90 bp GTGTCAAACTACTACGGAAGTATGCTTCACGGAAGCACAGTCATATaGCTTCGCCTGCAGGAAAAACTCACTTCATCTTTATTTCTTCTT +
Preference number: 6 (lower is better)
Translates to: VSNYYGSMLHGSTVI*LRLQEKLTSSLFLL
Trigger: AAGAAGAAATAAAGATGAAGTGAGTTTTTCCTGCAGGCGAAGCAATATGACTGTGCTTCCGTGAAGCATACTTCCGTAGTAGTTTGACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634495.2
CDS CAA 90 bp CCTCATCTGGTGATGGATGCAAAGCAAAAAGTTCTTTGTGACGGTTaGATTTCCTTTGGTCATCATTCTGACGGTCTATTTCTTCATTTG +
Preference number: 6 (lower is better)
Translates to: PHLVMDAKQKVLCDG*ISFGHHSDGLFLHL
Trigger: CAAATGAAGAAATAGACCGTCAGAATGATGACCAAAGGAAATCAAACCGTCACAAAGAACTTTTTGCTTTGCATCCATCACCAGATGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000251157.10
ENST00000340370.10
ENST00000404627.3
ENST00000454575.6
ENST00000614472.5
ENST00000634264.1
ENST00000635123.1
ENST00000635253.2
ENST00000635827.1
ENST00000637208.1
CDS CCA 72 bp GATATATTGCCAACAATATTAAGGTTTTTGAGCAGTTaGGGAGAACCACTATATTGTCCGGAGATCTGCTTC +
Preference number: 6 (lower is better)
Translates to: DILPTILRFLSS*GEPLYCPEICF
Trigger: GAAGCAGATCTCCGGACAATATAGTGGTTCTCCCCAACTGCTCAAAAACCTTAATATTGTTGGCAATATATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000251157.10
ENST00000340370.10
ENST00000404627.3
ENST00000454575.6
ENST00000634264.1
ENST00000635123.1
ENST00000635253.2
ENST00000637208.1
CDS CAA 72 bp GGATATATTGCCAACAATATTAAGGTTTTTGAGCAGTaGGGGAGAACCACTATATTGTCCGGAGATCTGCTT +
Preference number: 6 (lower is better)
Translates to: GYIANNIKVFEQ*GRTTILSGDLL
Trigger: AAGCAGATCTCCGGACAATATAGTGGTTCTCCCCAACTGCTCAAAAACCTTAATATTGTTGGCAATATATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000251157.10
ENST00000340370.10
ENST00000404627.3
ENST00000454575.6
ENST00000634264.1
ENST00000635123.1
ENST00000635253.2
ENST00000637208.1
CDS GCA 72 bp TTTCACTTTCTTCAGGTACAGCTGAAACAAGAGTTCTaGAGTCCCGAGGACTATAAACAACTTCAATATCAT +
Preference number: 6 (lower is better)
Translates to: FHFLQVQLKQEF*SPEDYKQLQYH
Trigger: ATGATATTGAAGTTGTTTATAGTCCTCGGGACTGCAGAACTCTTGTTTCAGCTGTACCTGAAGAAAGTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000251157.10
ENST00000340370.10
ENST00000404627.3
ENST00000454575.6
ENST00000634264.1
ENST00000635123.1
ENST00000635253.2
ENST00000635827.1
ENST00000637208.1
CDS GCA 72 bp TTGGTTATTCTAAATCACCCAAACCACCCATTGGCATaGATTAACTACACATTCATGTCAGGTACAAAGTAC +
Preference number: 6 (lower is better)
Translates to: LVILNHPNHPLA*INYTFMSGTKY
Trigger: GTACTTTGTACCTGACATGAATGTGTAGTTAATGCATGCCAATGGGTGGTTTGGGTGATTTAGAATAACCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489185.1
CDS CAA 72 bp TCCTTTGGTCATCATTCTGACGGTCTATTTCTTCATTaGGAGTTCGATCAAGTAAATTGGGAAGCAAAGCAT +
Preference number: 6 (lower is better)
Translates to: SFGHHSDGLFLH*EFDQVNWEAKH
Trigger: ATGCTTTGCTTCCCAATTTACTTGATCGAACTCCAAATGAAGAAATAGACCGTCAGAATGATGACCAAAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000251157.10
ENST00000340370.10
ENST00000404627.3
ENST00000454575.6
ENST00000614472.5
ENST00000634264.1
ENST00000635123.1
ENST00000635253.2
ENST00000635827.1
ENST00000637208.1
CDS CAA 72 bp GTGATGGATGCAAAGCAAAAAGTTCTTTGTGACGGTTaGATTTCCTTTGGTCATCATTCTGACGGTCTATTT +
Preference number: 6 (lower is better)
Translates to: VMDAKQKVLCDG*ISFGHHSDGLF
Trigger: AAATAGACCGTCAGAATGATGACCAAAGGAAATCAAACCGTCACAAAGAACTTTTTGCTTTGCATCCATCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000251157.10
ENST00000340370.10
ENST00000404627.3
ENST00000454575.6
ENST00000614472.5
ENST00000634264.1
ENST00000635123.1
ENST00000635253.2
ENST00000635827.1
ENST00000637208.1
CDS CAA 72 bp TCTGACTACGCTTCTGACTTACAACCTGTGCAATGGTaGTTGTTCCTTTTTCCTAATTGTTCTTCTCACAAA +
Preference number: 6 (lower is better)
Translates to: SDYASDLQPVQW*LFLFPNCSSHK
Trigger: TTTGTGAGAAGAACAATTAGGAAAAAGGAACAACAACCATTGCACAGGTTGTAAGTCAGAAGCGTAGTCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635983.1
CDS CAA 90 bp TTATGGTATAAGGGATGGTACATATCTTCTGGTACATCTGAGTTGTaGTTACATGGCTTGAATGTATTTGCTTCACTAATGCTGTTTGCC +
Preference number: 6 (lower is better)
Translates to: LWYKGWYISSGTSEL*LHGLNVFASLMLFA
Trigger: GGCAAACAGCATTAGTGAAGCAAATACATTCAAGCCATGTAACAACAACTCAGATGTACCAGAAGATATGTACCATCCCTTATACCATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467758.1
CDS TCA 72 bp CAAACATCCGCTTACCATCCTGATGAACAATTTTGCTaGATGCTTCTTGAAGTTTACCATGAATTGTGGATA +
Preference number: 6 (lower is better)
Translates to: QTSAYHPDEQFC*MLLEVYHELWI
Trigger: TATCCACAATTCATGGTAAACTTCAAGAAGCATTCAGCAAAATTGTTCATCAGGATGGTAAGCGGATGTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454575.6
ENST00000635123.1
ENST00000637255.1
CDS TCA 72 bp GGAGGAGACTCGATAGGATATTTTGCAGTATTTCAATaGAGCCAAGGATTTAGTTTCAAAGAAATCAACTGC +
Preference number: 6 (lower is better)
Translates to: GGDSIGYFAVFQ*SQGFSFKEINC
Trigger: GCAGTTGATTTCTTTGAAACTAAATCCTTGGCTTCATTGAAATACTGCAAAATATCCTATCGAGTCTCCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635983.1
CDS GCA 72 bp GTATATACTCTGACTACGCTTCTGACTTACAACCTGTaGAATGGTTGTTGTTCCTTTTTCCTAATTGTTCTT +
Preference number: 6 (lower is better)
Translates to: VYTLTTLLTYNL*NGCCSFFLIVL
Trigger: AAGAACAATTAGGAAAAAGGAACAACAACCATTGCACAGGTTGTAAGTCAGAAGCGTAGTCAGAGTATATAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635983.1
CDS CAA 72 bp AAGGGATGGTACATATCTTCTGGTACATCTGAGTTGTaGTTACATGGCTTGAATGTATTTGCTTCACTAATG +
Preference number: 6 (lower is better)
Translates to: KGWYISSGTSEL*LHGLNVFASLM
Trigger: CATTAGTGAAGCAAATACATTCAAGCCATGTAACAACAACTCAGATGTACCAGAAGATATGTACCATCCCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467758.1
CDS CAA 90 bp GACCACAAGTATATAAGCTCCTTAAGAACAGAAATGATATGTACTTaGTCCAAGCATGTTATGTCTAGGCTGATAAAGTGGTTTCTAGGT +
Preference number: 6 (lower is better)
Translates to: DHKYISSLRTEMICT*SKHVMSRLIKWFLG
Trigger: ACCTAGAAACCACTTTATCAGCCTAGACATAACATGCTTGGACAAAGTACATATCATTTCTGTTCTTAAGGAGCTTATATACTTGTGGTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635983.1
CDS CAA 90 bp ATGTTATGGTATAAGGGATGGTACATATCTTCTGGTACATCTGAGTaGTTGTTACATGGCTTGAATGTATTTGCTTCACTAATGCTGTTT +
Preference number: 6 (lower is better)
Translates to: MLWYKGWYISSGTSE*LLHGLNVFASLMLF
Trigger: AAACAGCATTAGTGAAGCAAATACATTCAAGCCATGTAACAACAACTCAGATGTACCAGAAGATATGTACCATCCCTTATACCATAACAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467758.1
CDS TCA 72 bp GTTAATGAGCTTTGCTTTGGCCATGAACTATCATTTTaGCCGCTCATTTGTAGTCTGATTAAAATGGTCATT +
Preference number: 6 (lower is better)
Translates to: VNELCFGHELSF*PLICSLIKMVI
Trigger: AATGACCATTTTAATCAGACTACAAATGAGCGGTCAAAATGATAGTTCATGGCCAAAGCAAAGCTCATTAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635983.1
CDS TCA 72 bp TTTCTTTCCTCAGTAGTGCTCATAGTCAAGGTGAAGTaGCTCAAGATCAAATTAACACAGTATCTCATCAAT +
Preference number: 6 (lower is better)
Translates to: FLSSVVLIVKVK*LKIKLTQYLIN
Trigger: ATTGATGAGATACTGTGTTAATTTGATCTTGAGTCACTTCACCTTGACTATGAGCACTACTGAGGAAAGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635983.1
CDS CAA 72 bp GGATCTAATTTACACTTGTCTACAGGATTAGAGTCTTaGATTACTTCAACCACATCCTCTCCAAATCTTTCT +
Preference number: 6 (lower is better)
Translates to: GSNLHLSTGLES*ITSTTSSPNLS
Trigger: AGAAAGATTTGGAGAGGATGTGGTTGAAGTAATCAAAGACTCTAATCCTGTAGACAAGTGTAAATTAGATCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000251157.10
ENST00000340370.10
ENST00000454575.6
ENST00000467758.1
ENST00000489185.1
ENST00000634264.1
ENST00000634495.2
ENST00000635123.1
ENST00000635253.2
ENST00000635983.1
ENST00000637255.1
ENST00000637487.1
CDS CAA 72 bp TATAAGGGATGGTACATATCTTCTGGTACATCTGAGTaGTTGTTACATGGCTTGAATGTATTTGCTTCACTA +
Preference number: 6 (lower is better)
Translates to: YKGWYISSGTSE*LLHGLNVFASL
Trigger: TAGTGAAGCAAATACATTCAAGCCATGTAACAACAACTCAGATGTACCAGAAGATATGTACCATCCCTTATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467758.1
CDS TCA 72 bp TTATACTTCAGCATAAAAATCAGGTTGGTGGCTTACTaGCAAAACACATTCTTCCAAGATATATTGTACTCC +
Preference number: 6 (lower is better)
Translates to: LYFSIKIRLVAY*QNTFFQDILYS
Trigger: GGAGTACAATATATCTTGGAAGAATGTGTTTTGTCAGTAAGCCACCAACCTGATTTTTATGCTGAAGTATAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634495.2
CDS GCA 72 bp TCCTGTTCCCAATTTATGATATTTTCTGATGACAATTaGCCAGTCTTCTGTATAACTTCTTATACAGTCTCT +
Preference number: 6 (lower is better)
Translates to: SCSQFMIFSDDN*PVFCITSYTVS
Trigger: AGAGACTGTATAAGAAGTTATACAGAAGACTGGGCAATTGTCATCAGAAAATATCATAAATTGGGAACAGGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000251157.10
ENST00000340370.10
ENST00000404627.3
ENST00000454575.6
ENST00000614472.5
ENST00000634264.1
ENST00000635123.1
ENST00000635253.2
ENST00000635827.1
ENST00000637208.1
CDS CAA 72 bp CAAGAAATTCTTTTGAGGATTACCTCCTTCCCTATGTaGTTTTCCTCTATATTTCATCCTCTACTGCAATTA +
Preference number: 6 (lower is better)
Translates to: QEILLRITSFPM*FSSIFHPLLQL
Trigger: TAATTGCAGTAGAGGATGAAATATAGAGGAAAACAACATAGGGAAGGAGGTAATCCTCAAAAGAATTTCTTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634495.2
CDS CAA 72 bp CTTGAGAATTCTTACAAATTTCCTCAAGAAATTCTTTaGAGGATTACCTCCTTCCCTATGTTGTTTTCCTCT +
Preference number: 6 (lower is better)
Translates to: LENSYKFPQEIL*RITSFPMLFSS
Trigger: AGAGGAAAACAACATAGGGAAGGAGGTAATCCTCAAAAGAATTTCTTGAGGAAATTTGTAAGAATTCTCAAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634495.2