RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DOCK5 (Homo sapiens)

Ensembl gene IDs: ENSG00000147459

Ensembl transcript IDs: ENST00000276440.12, ENST00000410074.5, ENST00000444569.5, ENST00000467709.6, ENST00000478099.1, ENST00000479547.2, ENST00000481100.5, ENST00000481728.2, ENST00000487948.1, ENST00000495236.1, ENST00000521405.1

Found 1094 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGATGCCAGACTTCCGAGCCTTTGGAGGTGGAGGGGGTGGTGCTTTaGCTTCTCTTCGGACAGGCAGTGGGGGAGCGAGCTCAGTGGAGT +
Preference number: 1 (lower is better)
Translates to: GCQTSEPLEVEGVVL*LLFGQAVGERAQWS
Trigger: ACTCCACTGAGCTCGCTCCCCCACTGCCTGTCCGAAGAGAAGCCAAAGCACCACCCCCTCCACCTCCAAAGGCTCGGAAGTCTGGCATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR CCA 90 bp GGAAGTAGGGATGCCAGACTTCCGAGCCTTTGGAGGTGGAGGGGGTaGTGCTTTGGCTTCTCTTCGGACAGGCAGTGGGGGAGCGAGCTC +
Preference number: 1 (lower is better)
Translates to: GSRDARLPSLWRWRG*CFGFSSDRQWGSEL
Trigger: GAGCTCGCTCCCCCACTGCCTGTCCGAAGAGAAGCCAAAGCACCACCCCCTCCACCTCCAAAGGCTCGGAAGTCTGGCATCCCTACTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR CCA 90 bp TCCAGGCTCGGAAGTAGGGATGCCAGACTTCCGAGCCTTTGGAGGTaGAGGGGGTGGTGCTTTGGCTTCTCTTCGGACAGGCAGTGGGGG +
Preference number: 1 (lower is better)
Translates to: SRLGSRDARLPSLWR*RGWCFGFSSDRQWG
Trigger: CCCCCACTGCCTGTCCGAAGAGAAGCCAAAGCACCACCCCCTCCACCTCCAAAGGCTCGGAAGTCTGGCATCCCTACTTCCGAGCCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR GCA 90 bp AGTAGGGATGCCAGACTTCCGAGCCTTTGGAGGTGGAGGGGGTGGTaGTTTGGCTTCTCTTCGGACAGGCAGTGGGGGAGCGAGCTCAGT +
Preference number: 1 (lower is better)
Translates to: SRDARLPSLWRWRGW*FGFSSDRQWGSELS
Trigger: ACTGAGCTCGCTCCCCCACTGCCTGTCCGAAGAGAAGCCAAAGCACCACCCCCTCCACCTCCAAAGGCTCGGAAGTCTGGCATCCCTACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR CCA 90 bp CTGGGATCCAGGCTCGGAAGTAGGGATGCCAGACTTCCGAGCCTTTaGAGGTGGAGGGGGTGGTGCTTTGGCTTCTCTTCGGACAGGCAG +
Preference number: 1 (lower is better)
Translates to: LGSRLGSRDARLPSL*RWRGWCFGFSSDRQ
Trigger: CTGCCTGTCCGAAGAGAAGCCAAAGCACCACCCCCTCCACCTCCAAAGGCTCGGAAGTCTGGCATCCCTACTTCCGAGCCTGGATCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR CCA 90 bp CCCAGGCTGGCTTTCCCCCAACATGCAGGAACACTGGCCCATGGGTaGGTCAGCCCTTCACTCTCTCATCTCCTAAACCCTCGCTACAGA +
Preference number: 1 (lower is better)
Translates to: PRLAFPQHAGTLAHG*VSPSLSHLLNPRYR
Trigger: TCTGTAGCGAGGGTTTAGGAGATGAGAGAGTGAAGGGCTGACCCACCCATGGGCCAGTGTTCCTGCATGTTGGGGGAAAGCCAGCCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481100.5
3UTR CCA 90 bp TGCTCCCAGGCTGGCTTTCCCCCAACATGCAGGAACACTGGCCCATaGGTGGGTCAGCCCTTCACTCTCTCATCTCCTAAACCCTCGCTA +
Preference number: 1 (lower is better)
Translates to: CSQAGFPPTCRNTGP*VGQPFTLSSPKPSL
Trigger: TAGCGAGGGTTTAGGAGATGAGAGAGTGAAGGGCTGACCCACCCATGGGCCAGTGTTCCTGCATGTTGGGGGAAAGCCAGCCTGGGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481100.5
3UTR TCA 90 bp ATGGAGAGAGGGTGCACAGAGAGGGACCGGTCCCAGGCATGCTGCTaGACACAGTTGCTGATCCTCTCGTTGGTCAGCTCCATGGTTTCG +
Preference number: 1 (lower is better)
Translates to: MERGCTERDRSQACC*TQLLILSLVSSMVS
Trigger: CGAAACCATGGAGCTGACCAACGAGAGGATCAGCAACTGTGTTCAGCAGCATGCCTGGGACCGGTCCCTCTCTGTGCACCCTCTCTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR TCA 90 bp CTGTCTGCAACGATGGGGAGCTTAGGGTCCTGGTGGCTTTGGGAGTaGGTGGAGGTGGGCTCAAGGGTGTTGACTGAGGAGGTGAAGAAC +
Preference number: 1 (lower is better)
Translates to: LSATMGSLGSWWLWE*VEVGSRVLTEEVKN
Trigger: GTTCTTCACCTCCTCAGTCAACACCCTTGAGCCCACCTCCACTCACTCCCAAAGCCACCAGGACCCTAAGCTCCCCATCGTTGCAGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR CCA 90 bp TGCGAGCTTGCCTCGTGGTCAGGCTTGTTGGAGTTGTCATCTAACTaGCCGCTGAGCTGGTCTGTCAGCAGTGGCAGCAGCACTTCTCTG +
Preference number: 1 (lower is better)
Translates to: CELASWSGLLELSSN*PLSWSVSSGSSTSL
Trigger: CAGAGAAGTGCTGCTGCCACTGCTGACAGACCAGCTCAGCGGCCAGTTAGATGACAACTCCAACAAGCCTGACCACGAGGCAAGCTCGCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR TCA 90 bp GGAAGCAAGAAGACAACCGCTCATGCAGCGGCTTCAGCTGCTCTGTaGGTTTCTCCCCATGGATGCGGATCCCTTCTGTTAGCAGGGGCA +
Preference number: 1 (lower is better)
Translates to: GSKKTTAHAAASAAL*VSPHGCGSLLLAGA
Trigger: TGCCCCTGCTAACAGAAGGGATCCGCATCCATGGGGAGAAACTCACAGAGCAGCTGAAGCCGCTGCATGAGCGGTTGTCTTCTTGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR CCA 90 bp AGCTGTCTAAGGCACTCGGTGTTGCAGGGAGGGCAAGATCCTTACTaGGATCCAGGCTCGGAAGTAGGGATGCCAGACTTCCGAGCCTTT +
Preference number: 1 (lower is better)
Translates to: SCLRHSVLQGGQDPY*DPGSEVGMPDFRAF
Trigger: AAAGGCTCGGAAGTCTGGCATCCCTACTTCCGAGCCTGGATCCCAGTAAGGATCTTGCCCTCCCTGCAACACCGAGTGCCTTAGACAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR GCA 90 bp AGTTCCCGGAAGCAAGAAGACAACCGCTCATGCAGCGGCTTCAGCTaGTCTGTGAGTTTCTCCCCATGGATGCGGATCCCTTCTGTTAGC +
Preference number: 1 (lower is better)
Translates to: SSRKQEDNRSCSGFS*SVSFSPWMRIPSVS
Trigger: GCTAACAGAAGGGATCCGCATCCATGGGGAGAAACTCACAGAGCAGCTGAAGCCGCTGCATGAGCGGTTGTCTTCTTGCTTCCGGGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR CCA 90 bp TCGTGGTCAGGCTTGTTGGAGTTGTCATCTAACTGGCCGCTGAGCTaGTCTGTCAGCAGTGGCAGCAGCACTTCTCTGCACTCTGACTGT +
Preference number: 1 (lower is better)
Translates to: SWSGLLELSSNWPLS*SVSSGSSTSLHSDC
Trigger: ACAGTCAGAGTGCAGAGAAGTGCTGCTGCCACTGCTGACAGACCAGCTCAGCGGCCAGTTAGATGACAACTCCAACAAGCCTGACCACGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR CCA 90 bp GCTCCTCAATGGCCTACCCATGGCTCCAGCTCCTGCAGCTCAATATaGAGGGCCTCAGTAAAGCTCTGCAAGGATCCTTTCACATGCTCC +
Preference number: 1 (lower is better)
Translates to: APQWPTHGSSSCSSI*RASVKLCKDPFTCS
Trigger: GGAGCATGTGAAAGGATCCTTGCAGAGCTTTACTGAGGCCCTCCATATTGAGCTGCAGGAGCTGGAGCCATGGGTAGGCCATTGAGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
3UTR TCA 90 bp ATCACTGTCCGGTTGATCCTTCTCAGCAGCCGTTCCATTATAAGCTaGATGTGCACCGCAGTGGCACCCACATCCTTCCTGTCCAGCACC +
Preference number: 1 (lower is better)
Translates to: ITVRLILLSSRSIIS*MCTAVAPTSFLSST
Trigger: GGTGCTGGACAGGAAGGATGTGGGTGCCACTGCGGTGCACATTCAGCTTATAATGGAACGGCTGCTGAGAAGGATCAACCGGACAGTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR TCA 90 bp TGGAATTCTCAGTTTGTTCTACTTGTCTGCAGTGGCAGCTGCAAGTaGGCTGAGATGATGCCCTCTGACTGGCACGATGGCCCCTGGTGG +
Preference number: 1 (lower is better)
Translates to: WNSQFVLLVCSGSCK*AEMMPSDWHDGPWW
Trigger: CCACCAGGGGCCATCGTGCCAGTCAGAGGGCATCATCTCAGCTCACTTGCAGCTGCCACTGCAGACAAGTAGAACAAACTGAGAATTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481100.5
3UTR GCA 90 bp TCTACTTTCTCCTTGAGTTCCCGGAAGCAAGAAGACAACCGCTCATaGAGCGGCTTCAGCTGCTCTGTGAGTTTCTCCCCATGGATGCGG +
Preference number: 1 (lower is better)
Translates to: STFSLSSRKQEDNRS*SGFSCSVSFSPWMR
Trigger: CCGCATCCATGGGGAGAAACTCACAGAGCAGCTGAAGCCGCTGCATGAGCGGTTGTCTTCTTGCTTCCGGGAACTCAAGGAGAAAGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR GCA 90 bp TCAATATGGAGGGCCTCAGTAAAGCTCTGCAAGGATCCTTTCACATaGTCCCAGGCTGGCTTTCCCCCAACATGCAGGAACACTGGCCCA +
Preference number: 1 (lower is better)
Translates to: SIWRASVKLCKDPFT*SQAGFPPTCRNTGP
Trigger: TGGGCCAGTGTTCCTGCATGTTGGGGGAAAGCCAGCCTGGGAGCATGTGAAAGGATCCTTGCAGAGCTTTACTGAGGCCCTCCATATTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481100.5
3UTR TCA 90 bp GGAGGCAGAGACACCAAACAGGAGGCTGCTGTAGTGCTCAAGGTGTaGCATGCTTACGGGATGGACCAAGGTGGTAGTCAGGGAGATAAA +
Preference number: 1 (lower is better)
Translates to: GGRDTKQEAAVVLKV*HAYGMDQGGSQGDK
Trigger: TTTATCTCCCTGACTACCACCTTGGTCCATCCCGTAAGCATGTCACACCTTGAGCACTACAGCAGCCTCCTGTTTGGTGTCTCTGCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444569.5
3UTR CCA 90 bp AACCGCTCATGCAGCGGCTTCAGCTGCTCTGTGAGTTTCTCCCCATaGATGCGGATCCCTTCTGTTAGCAGGGGCATCTGTAATGCTATT +
Preference number: 1 (lower is better)
Translates to: NRSCSGFSCSVSFSP*MRIPSVSRGICNAI
Trigger: AATAGCATTACAGATGCCCCTGCTAACAGAAGGGATCCGCATCCATGGGGAGAAACTCACAGAGCAGCTGAAGCCGCTGCATGAGCGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR TCA 90 bp TGGGCAAGGTTGTGGGAGAGACCACCAGCAAGTTTCCCCCAGTGCTaGCCTCTGCCTTCACAGTCAAAAAGCTTTCTGCTTTGCCACAAA +
Preference number: 1 (lower is better)
Translates to: WARLWERPPASFPQC*PLPSQSKSFLLCHK
Trigger: TTTGTGGCAAAGCAGAAAGCTTTTTGACTGTGAAGGCAGAGGTCAGCACTGGGGGAAACTTGCTGGTGGTCTCTCCCACAACCTTGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR TCA 90 bp GAGCTTGTCAGAGGCAGAACTCCCCTGCAGCCTAACAAGTTCCCCTaGTTCATATGCATGATGCAGTCTGAGAAGCCCTATGCTAGCCCA +
Preference number: 1 (lower is better)
Translates to: ELVRGRTPLQPNKFP*FICMMQSEKPYASP
Trigger: TGGGCTAGCATAGGGCTTCTCAGACTGCATCATGCATATGAATCAGGGGAACTTGTTAGGCTGCAGGGGAGTTCTGCCTCTGACAAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481100.5
3UTR CCA 90 bp CTCTGGAACAGGTTTATCCTTGTAGCTGGGCGGCAAGCTCATCACTaGCTTTACAGTGAAGCACTGCATGTACTGCTTGGGGGACGACTT +
Preference number: 1 (lower is better)
Translates to: LWNRFILVAGRQAHH*LYSEALHVLLGGRL
Trigger: AAGTCGTCCCCCAAGCAGTACATGCAGTGCTTCACTGTAAAGCCAGTGATGAGCTTGCCGCCCAGCTACAAGGATAAACCTGTTCCAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR TCA 90 bp ACCCTCATGATGAACTGGTGTAGTTCTCTCCTGAAAGGGTGGCGGTaGAACAGGAAACACAGAGAATCAGGCAGGCAAATACCAGCTCTG +
Preference number: 1 (lower is better)
Translates to: TLMMNWCSSLLKGWR*NRKHRESGRQIPAL
Trigger: CAGAGCTGGTATTTGCCTGCCTGATTCTCTGTGTTTCCTGTTTCACCGCCACCCTTTCAGGAGAGAACTACACCAGTTCATCATGAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR TCA 90 bp TGCGCTTGGCTTGTGAGAAGGTTTCAAGCTGAAGGGACTCATGGGTaGGAAATGCAACTGCCAAATGGAAGTAATTGTTCCAGAGCTGAA +
Preference number: 1 (lower is better)
Translates to: CAWLVRRFQAEGTHG*EMQLPNGSNCSRAE
Trigger: TTCAGCTCTGGAACAATTACTTCCATTTGGCAGTTGCATTTCTCACCCATGAGTCCCTTCAGCTTGAAACCTTCTCACAAGCCAAGCGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR CCA 90 bp GAGGCTGTGACTGATTCTGGAATTCCATGTGGACTGGAAGGGAGGTaGCATGGCCTCAAAATTCTATCAAAGAGAAGCTTTTGGAAGAAC +
Preference number: 1 (lower is better)
Translates to: EAVTDSGIPCGLEGR*HGLKILSKRSFWKN
Trigger: GTTCTTCCAAAAGCTTCTCTTTGATAGAATTTTGAGGCCATGCCACCTCCCTTCCAGTCCACATGGAATTCCAGAATCAGTCACAGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
3UTR CCA 90 bp ATAGCCAGGGTATGGCAGGGTCAAAGCACCACCTGGGATGATAAATaGGACAAGTATAGTCCATGGACCTCAAAGCCTTTGTACAGAAAA +
Preference number: 1 (lower is better)
Translates to: IARVWQGQSTTWDDK*DKYSPWTSKPLYRK
Trigger: TTTTCTGTACAAAGGCTTTGAGGTCCATGGACTATACTTGTCCCATTTATCATCCCAGGTGGTGCTTTGACCCTGCCATACCCTGGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR TCA 90 bp AGTCTGAGAAGCCCTATGCTAGCCCACGTGATTCCGTGTCATCCATaGTGCCTGTTTCATGCAATAGACTGCACATATATTTTGGCATTG +
Preference number: 1 (lower is better)
Translates to: SLRSPMLAHVIPCHP*CLFHAIDCTYILAL
Trigger: CAATGCCAAAATATATGTGCAGTCTATTGCATGAAACAGGCATCATGGATGACACGGAATCACGTGGGCTAGCATAGGGCTTCTCAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481100.5
3UTR CCA 90 bp CTTTTTATCTTAATAGCCAGGGTATGGCAGGGTCAAAGCACCACCTaGGATGATAAATGGGACAAGTATAGTCCATGGACCTCAAAGCCT +
Preference number: 1 (lower is better)
Translates to: LFILIARVWQGQSTT*DDKWDKYSPWTSKP
Trigger: AGGCTTTGAGGTCCATGGACTATACTTGTCCCATTTATCATCCCAGGTGGTGCTTTGACCCTGCCATACCCTGGCTATTAAGATAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR TCA 90 bp ATGCAGTTAAGTTTCTGCCGAACCAGCTGGTTGTCAGGAATGCTTTaGATGAATTTGCAGAAGAGCACGCTGAGCTCAACAGGATCAAAT +
Preference number: 1 (lower is better)
Translates to: MQLSFCRTSWLSGML*MNLQKSTLSSTGSN
Trigger: ATTTGATCCTGTTGAGCTCAGCGTGCTCTTCTGCAAATTCATTCAAAGCATTCCTGACAACCAGCTGGTTCGGCAGAAACTTAACTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR CCA 90 bp GGTCAAAGCACCACCTGGGATGATAAATGGGACAAGTATAGTCCATaGACCTCAAAGCCTTTGTACAGAAAACTAGTTTCCTTCAGATCC +
Preference number: 1 (lower is better)
Translates to: GQSTTWDDKWDKYSP*TSKPLYRKLVSFRS
Trigger: GGATCTGAAGGAAACTAGTTTTCTGTACAAAGGCTTTGAGGTCCATGGACTATACTTGTCCCATTTATCATCCCAGGTGGTGCTTTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR GCA 90 bp GTAAAAGACCTCAAAGGAAACCACCATTTGGAGAAGGGCTGTATGTaGAGAACTAACTTGCACTCACATTCCAAACTACCTTGGAAGAAA +
Preference number: 1 (lower is better)
Translates to: VKDLKGNHHLEKGCM*RTNLHSHSKLPWKK
Trigger: TTTCTTCCAAGGTAGTTTGGAATGTGAGTGCAAGTTAGTTCTGCACATACAGCCCTTCTCCAAATGGTGGTTTCCTTTGAGGTCTTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR CCA 90 bp ACCTTCCTGAGTTTCCCAAATGAAAAGACCTACAGTTACAGACACTaGGGATTTCTTTCTGATCATACAATGGCGAAATCCACAGTCAAC +
Preference number: 1 (lower is better)
Translates to: TFLSFPNEKTYSYRH*GFLSDHTMAKSTVN
Trigger: GTTGACTGTGGATTTCGCCATTGTATGATCAGAAAGAAATCCCCAGTGTCTGTAACTGTAGGTCTTTTCATTTGGGAAACTCAGGAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
3UTR TCA 90 bp CTGAGAAAATGGTTTCTAACACCTGTTTCTGTGTTAAAAGACAATTaGATGGCTAATCCAGGTCTCAAGTCACCTGGGACACATGCCAAA +
Preference number: 1 (lower is better)
Translates to: LRKWFLTPVSVLKDN*MANPGLKSPGTHAK
Trigger: TTTGGCATGTGTCCCAGGTGACTTGAGACCTGGATTAGCCATTCAATTGTCTTTTAACACAGAAACAGGTGTTAGAAACCATTTTCTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481100.5
3UTR TCA 90 bp AAGTTCAGTTTACCCTCTTCAATGGGAGTCCAACATCAAGGACTTTaGATAAAGTCTTCTGTTCAGCTCCTATCTGACAATCTTGCAGCT +
Preference number: 1 (lower is better)
Translates to: KFSLPSSMGVQHQGL*IKSSVQLLSDNLAA
Trigger: AGCTGCAAGATTGTCAGATAGGAGCTGAACAGAAGACTTTATTCAAAGTCCTTGATGTTGGACTCCCATTGAAGAGGGTAAACTGAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
3UTR CCA 90 bp GCAAAGGCATTTTTGACAAAGTTTAGACAAACGACTCACAAAATATaGCTAATAGTAGATGAGTTTGGACATCTGATACTGCAGACCAGC +
Preference number: 1 (lower is better)
Translates to: AKAFLTKFRQTTHKI*LIVDEFGHLILQTS
Trigger: GCTGGTCTGCAGTATCAGATGTCCAAACTCATCTACTATTAGCCATATTTTGTGAGTCGTTTGTCTAAACTTTGTCAAAAATGCCTTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR CAA 90 bp GGGATGCCAGACTTCCGAGCCTTTGGAGGTGGAGGGGGTGGTGCTTaGGCTTCTCTTCGGACAGGCAGTGGGGGAGCGAGCTCAGTGGAG +
Preference number: 2 (lower is better)
Translates to: GMPDFRAFGGGGGGA*ASLRTGSGGASSVE
Trigger: CTCCACTGAGCTCGCTCCCCCACTGCCTGTCCGAAGAGAAGCCAAAGCACCACCCCCTCCACCTCCAAAGGCTCGGAAGTCTGGCATCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR CAA 90 bp GCTGAGATGATGCCCTCTGACTGGCACGATGGCCCCTGGTGGGACTaGGTCCCGGCAATGCTCTTGGCCTCCACTAGGCCTCCACTGCCT +
Preference number: 2 (lower is better)
Translates to: AEMMPSDWHDGPWWD*VPAMLLASTRPPLP
Trigger: AGGCAGTGGAGGCCTAGTGGAGGCCAAGAGCATTGCCGGGACCAAGTCCCACCAGGGGCCATCGTGCCAGTCAGAGGGCATCATCTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481100.5
3UTR-3UTR TCA 90 bp TTCTCTTCGGACAGGCAGTGGGGGAGCGAGCTCAGTGGAGTTCCTCTGGCTGCCGCTTGGGGGACGACTTaGTGTCTTCCCCAGGAGGCG +
Preference number: 2 (lower is better)
Translates to: FSSDRQWGSELSGVPLAAAWGTT*CLPQEA
Trigger: CGCCTCCTGGGGAAGACATCAAGTCGTCCCCCAAGC...GGCAGCCAGAGGAACTCCACTGAGCTCGCTCCCCCACTGCCTGTCCGAAGAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR TCA 90 bp TTCTCTTCGGACAGGCAGTGGGGGAGCGAGCTCAGTGGAGTTCCTCTGGCTGCCCATCTAACTGGCCGCTaGGCTGGTCTGTCAGCAGTG +
Preference number: 2 (lower is better)
Translates to: FSSDRQWGSELSGVPLAAHLTGR*AGLSAV
Trigger: CACTGCTGACAGACCAGCTCAGCGGCCAGTTAGATG...GGCAGCCAGAGGAACTCCACTGAGCTCGCTCCCCCACTGCCTGTCCGAAGAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CCA 90 bp TTCTCTTCGGACAGGCAGTGGGGGAGCGAGCTCAGTGGAGTTCCTCTGGCTGCCGAATTCCATGTGGACTaGAAGGGAGGTGGCATGGCC +
Preference number: 2 (lower is better)
Translates to: FSSDRQWGSELSGVPLAAEFHVD*KGGGMA
Trigger: GGCCATGCCACCTCCCTTCCAGTCCACATGGAATTC...GGCAGCCAGAGGAACTCCACTGAGCTCGCTCCCCCACTGCCTGTCCGAAGAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR CAA 90 bp GCTGGAGGCCAGTTCTCAGGCAGCAGCTGTCTAAGGCACTCGGTGTaGCAGGGAGGGCAAGATCCTTACTGGGATCCAGGCTCGGAAGTA +
Preference number: 2 (lower is better)
Translates to: AGGQFSGSSCLRHSV*QGGQDPYWDPGSEV
Trigger: TACTTCCGAGCCTGGATCCCAGTAAGGATCTTGCCCTCCCTGCAACACCGAGTGCCTTAGACAGCTGCTGCCTGAGAACTGGCCTCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR TCA 90 bp TTCTCTTCGGACAGGCAGTGGGGGAGCGAGCTCAGTGGAGTTCCTCTGGCTGCCCAATCACTGTCCGGTTaGTCCTTCTCAGCAGCCGTT +
Preference number: 2 (lower is better)
Translates to: FSSDRQWGSELSGVPLAAQSLSG*SFSAAV
Trigger: AACGGCTGCTGAGAAGGATCAACCGGACAGTGATTG...GGCAGCCAGAGGAACTCCACTGAGCTCGCTCCCCCACTGCCTGTCCGAAGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR TCA 90 bp TTCTCTTCGGACAGGCAGTGGGGGAGCGAGCTCAGTGGAGTTCCTCTGGCTGCCGCTGAACACAGTTGCTaGTCCTCTCGTTGGTCAGCT +
Preference number: 2 (lower is better)
Translates to: FSSDRQWGSELSGVPLAAAEHSC*SSRWSA
Trigger: AGCTGACCAACGAGAGGATCAGCAACTGTGTTCAGC...GGCAGCCAGAGGAACTCCACTGAGCTCGCTCCCCCACTGCCTGTCCGAAGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CCA 90 bp TCTGGGCAAGGTTGTGGGAGAGACCACCAGCAAGTTTCCCCCAGTGCTGACCTCAATGAGGACACCGGCTaGAGGCCAGTTCTCAGGCAG +
Preference number: 2 (lower is better)
Translates to: SGQGCGRDHQQVSPSADLNEDTG*RPVLRQ
Trigger: CTGCCTGAGAACTGGCCTCCAGCCGGTGTCCTCATT...GAGGTCAGCACTGGGGGAAACTTGCTGGTGGTCTCTCCCACAACCTTGCCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR CCA 90 bp CTCGGTGTTGCAGGGAGGGCAAGATCCTTACTGGGATCCAGGCTCGGAAGTAGGGAGGTGGGACAGGAGTaGCCGCGATTCCATCTGTCT +
Preference number: 2 (lower is better)
Translates to: LGVAGRARSLLGSRLGSREVGQE*PRFHLS
Trigger: AGACAGATGGAATCGCGGCCACTCCTGTCCCACCTC...CCTACTTCCGAGCCTGGATCCCAGTAAGGATCTTGCCCTCCCTGCAACACCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR CAA 90 bp TTGCTCAGAAGCTGCGAGCTTGCCTCGTGGTCAGGCTTGTTGGAGTaGTCATCTAACTGGCCGCTGAGCTGGTCTGTCAGCAGTGGCAGC +
Preference number: 2 (lower is better)
Translates to: LLRSCELASWSGLLE*SSNWPLSWSVSSGS
Trigger: GCTGCCACTGCTGACAGACCAGCTCAGCGGCCAGTTAGATGACAACTCCAACAAGCCTGACCACGAGGCAAGCTCGCAGCTTCTGAGCAA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR TCA 90 bp AGTTCCCGGAAGCAAGAAGACAACCGCTCATGCAGCGGCTTCAGCTGCTCTGTGCTTCAGGGGTCAGAGTaGCCTCCAGAATGGGACCCA +
Preference number: 2 (lower is better)
Translates to: SSRKQEDNRSCSGFSCSVLQGSE*PPEWDP
Trigger: TGGGTCCCATTCTGGAGGTCACTCTGACCCCTGAAG...CACAGAGCAGCTGAAGCCGCTGCATGAGCGGTTGTCTTCTTGCTTCCGGGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CCA 90 bp CCGTTCCATTATAAGCTGAATGTGCACCGCAGTGGCACCCACATCCTTCCTGTCCAGCAGGGAGCCCCATaGAATGAGGACACCGGCTGG +
Preference number: 2 (lower is better)
Translates to: PFHYKLNVHRSGTHILPVQQGAP*NEDTGW
Trigger: CCAGCCGGTGTCCTCATTCCATGGGGCTCCCTGCTG...GACAGGAAGGATGTGGGTGCCACTGCGGTGCACATTCAGCTTATAATGGAACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CCA 90 bp TCTGGGCAAGGTTGTGGGAGAGACCACCAGCAAGTTTCCCCCAGTGCTGACCTCGAATTCCATGTGGACTaGAAGGGAGGTGGCATGGCC +
Preference number: 2 (lower is better)
Translates to: SGQGCGRDHQQVSPSADLEFHVD*KGGGMA
Trigger: GGCCATGCCACCTCCCTTCCAGTCCACATGGAATTC...GAGGTCAGCACTGGGGGAAACTTGCTGGTGGTCTCTCCCACAACCTTGCCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR CCA 90 bp CTCGGTGTTGCAGGGAGGGCAAGATCCTTACTGGGATCCAGGCTCGGAAGTAGGTGCGAGCTTGCCTCGTaGTCAGGCTTGTTGGAGTTG +
Preference number: 2 (lower is better)
Translates to: LGVAGRARSLLGSRLGSRCELAS*SGLLEL
Trigger: CAACTCCAACAAGCCTGACCACGAGGCAAGCTCGCA...CCTACTTCCGAGCCTGGATCCCAGTAAGGATCTTGCCCTCCCTGCAACACCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CCA 90 bp CTCGGTGTTGCAGGGAGGGCAAGATCCTTACTGGGATCCAGGCTCGGAAGTAGGCCCCCTTCTACCTCCTaGTCCAGCTTTGTGATCAGC +
Preference number: 2 (lower is better)
Translates to: LGVAGRARSLLGSRLGSRPPSTS*SSFVIS
Trigger: GCTGATCACAAAGCTGGACCAGGAGGTAGAAGGGGG...CCTACTTCCGAGCCTGGATCCCAGTAAGGATCTTGCCCTCCCTGCAACACCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CCA 90 bp CTCGGTGTTGCAGGGAGGGCAAGATCCTTACTGGGATCCAGGCTCGGAAGTAGGCAGGAGGCGTGGTACTaGTCATCTTCTCCGCATTGG +
Preference number: 2 (lower is better)
Translates to: LGVAGRARSLLGSRLGSRQEAWY*SSSPHW
Trigger: CCAATGCGGAGAAGATGACCAGTACCACGCCTCCTG...CCTACTTCCGAGCCTGGATCCCAGTAAGGATCTTGCCCTCCCTGCAACACCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR CAA 90 bp TCCAGGATGTTGCTCAGAAGCTGCGAGCTTGCCTCGTGGTCAGGCTaGTTGGAGTTGTCATCTAACTGGCCGCTGAGCTGGTCTGTCAGC +
Preference number: 2 (lower is better)
Translates to: SRMLLRSCELASWSG*LELSSNWPLSWSVS
Trigger: GCTGACAGACCAGCTCAGCGGCCAGTTAGATGACAACTCCAACAAGCCTGACCACGAGGCAAGCTCGCAGCTTCTGAGCAACATCCTGGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR GCA 90 bp CTCGGTGTTGCAGGGAGGGCAAGATCCTTACTGGGATCCAGGCTCGGAAGTAGGGCAGCAGGGCAATCATaGAAGCCACAAAACTCCCGA +
Preference number: 2 (lower is better)
Translates to: LGVAGRARSLLGSRLGSRAAGQS*KPQNSR
Trigger: TCGGGAGTTTTGTGGCTTGCATGATTGCCCTGCTGC...CCTACTTCCGAGCCTGGATCCCAGTAAGGATCTTGCCCTCCCTGCAACACCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR GCA 90 bp AGAGAGGGACCGGTCCCAGGCATGCTGCTGAACACAGTTGCTGATCCTCTCGTTGGACCATGGCCAGTCTaGAAACAGTCTGGACCCATC +
Preference number: 2 (lower is better)
Translates to: REGPVPGMLLNTVADPLVGPWPV*KQSGPI
Trigger: GATGGGTCCAGACTGTTTGCAGACTGGCCATGGTCC...AACGAGAGGATCAGCAACTGTGTTCAGCAGCATGCCTGGGACCGGTCCCTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CCA 90 bp AGAGAGGGACCGGTCCCAGGCATGCTGCTGAACACAGTTGCTGATCCTCTCGTTGTGGCCCAAGGACCATaGCCAGTCTGCAAACAGTCT +
Preference number: 2 (lower is better)
Translates to: REGPVPGMLLNTVADPLVVAQGP*PVCKQS
Trigger: AGACTGTTTGCAGACTGGCCATGGTCCTTGGGCCAC...AACGAGAGGATCAGCAACTGTGTTCAGCAGCATGCCTGGGACCGGTCCCTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CCA 90 bp ATGGAGGGCCTCAGTAAAGCTCTGCAAGGATCCTTTCACATGCTCCCAGGCTGGACACTGGCCCATGGGTaGGTCAGCCCTTCACTCTCT +
Preference number: 2 (lower is better)
Translates to: MEGLSKALQGSFHMLPGWTLAHG*VSPSLS
Trigger: AGAGAGTGAAGGGCTGACCCACCCATGGGCCAGTGT...CCAGCCTGGGAGCATGTGAAAGGATCCTTGCAGAGCTTTACTGAGGCCCTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
3UTR-3UTR CCA 90 bp CCTGTGCAGGTGCTGGAGCAGGTCATGACGTTCACACCTGCACTTCTTCAGAGTAGGAACACTGGCCCATaGGTGGGTCAGCCCTTCACT +
Preference number: 2 (lower is better)
Translates to: PVQVLEQVMTFTPALLQSRNTGP*VGQPFT
Trigger: AGTGAAGGGCTGACCCACCCATGGGCCAGTGTTCCT...ACTCTGAAGAAGTGCAGGTGTGAACGTCATGACCTGCTCCAGCACCTGCACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
3UTR CAA 90 bp GGGAGAGGGAGAGGGCAGCTTTCCTGTGCCACAAGAAGATGGGAGTaGGGTGGACTCAAGAACTCAGGGCTGATGTTTGAGTCCATGCTC +
Preference number: 2 (lower is better)
Translates to: GRGRGQLSCATRRWE*GGLKNSGLMFESML
Trigger: GAGCATGGACTCAAACATCAGCCCTGAGTTCTTGAGTCCACCCAACTCCCATCTTCTTGTGGCACAGGAAAGCTGCCCTCTCCCTCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
3UTR CAA 90 bp AGGATGTTGCTCAGAAGCTGCGAGCTTGCCTCGTGGTCAGGCTTGTaGGAGTTGTCATCTAACTGGCCGCTGAGCTGGTCTGTCAGCAGT +
Preference number: 2 (lower is better)
Translates to: RMLLRSCELASWSGL*ELSSNWPLSWSVSS
Trigger: ACTGCTGACAGACCAGCTCAGCGGCCAGTTAGATGACAACTCCAACAAGCCTGACCACGAGGCAAGCTCGCAGCTTCTGAGCAACATCCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR TCA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTGGGAGCCCCATGGAATaGGGACACCGGCTGGAGGCC +
Preference number: 2 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPGSPME*GHRLEA
Trigger: GGCCTCCAGCCGGTGTCCTCATTCCATGGGGCTCCC...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
3UTR-3UTR TCA 90 bp CTCGGTGTTGCAGGGAGGGCAAGATCCTTACTGGGATCCAGGCTCGGAAGTAGGGAGAAGGTTTCAAGCTaGAGGGACTCATGGGTGAGA +
Preference number: 2 (lower is better)
Translates to: LGVAGRARSLLGSRLGSREKVSS*RDSWVR
Trigger: TCTCACCCATGAGTCCCTTCAGCTTGAAACCTTCTC...CCTACTTCCGAGCCTGGATCCCAGTAAGGATCTTGCCCTCCCTGCAACACCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR GCA 90 bp CTCGGTGTTGCAGGGAGGGCAAGATCCTTACTGGGATCCAGGCTCGGAAGTAGGCGGGAGTATCTGAACTaGTGCACTTCATTGGCTCTG +
Preference number: 2 (lower is better)
Translates to: LGVAGRARSLLGSRLGSRREYLN*CTSLAL
Trigger: CAGAGCCAATGAAGTGCAGCAGTTCAGATACTCCCG...CCTACTTCCGAGCCTGGATCCCAGTAAGGATCTTGCCCTCCCTGCAACACCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR GCA 90 bp CTCGGTGTTGCAGGGAGGGCAAGATCCTTACTGGGATCCAGGCTCGGAAGTAGGTGGAGTTCCTCTGGCTaGCTTCATAGGGCTTGCTTT +
Preference number: 2 (lower is better)
Translates to: LGVAGRARSLLGSRLGSRWSSSG*LHRACF
Trigger: AAAGCAAGCCCTATGAAGGCAGCCAGAGGAACTCCA...CCTACTTCCGAGCCTGGATCCCAGTAAGGATCTTGCCCTCCCTGCAACACCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR GCA 90 bp ATGGAGGGCCTCAGTAAAGCTCTGCAAGGATCCTTTCACATGCTCCCAGGCTGGGGACGGCACCCTCTCTaGATTCCAGAGCAGACAGAT +
Preference number: 2 (lower is better)
Translates to: MEGLSKALQGSFHMLPGWGRHPL*IPEQTD
Trigger: ATCTGTCTGCTCTGGAATGCAGAGAGGGTGCCGTCC...CCAGCCTGGGAGCATGTGAAAGGATCCTTGCAGAGCTTTACTGAGGCCCTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481100.5
3UTR-3UTR CCA 90 bp TTCTCTTCGGACAGGCAGTGGGGGAGCGAGCTCAGTGGAGTTCCTCTGGCTGCCTTCCAAGATGCAATATaGGATGGGATCAGTGTGTCC +
Preference number: 2 (lower is better)
Translates to: FSSDRQWGSELSGVPLAAFQDAI*DGISVS
Trigger: GGACACACTGATCCCATCCCATATTGCATCTTGGAA...GGCAGCCAGAGGAACTCCACTGAGCTCGCTCCCCCACTGCCTGTCCGAAGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR TCA 90 bp ATGGGCATGTGGGAACTTTCTGGGGTGCTGAAAACAGTGTATGTCTCTATCTTAGGGAGCCCCATGGAATaGGGACACCGGCTGGAGGCC +
Preference number: 2 (lower is better)
Translates to: MGMWELSGVLKTVYVSILGSPME*GHRLEA
Trigger: GGCCTCCAGCCGGTGTCCTCATTCCATGGGGCTCCC...TAAGATAGAGACATACACTGTTTTCAGCACCCCAGAAAGTTCCCACATGCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR GCA 90 bp CCGTTCCATTATAAGCTGAATGTGCACCGCAGTGGCACCCACATCCTTCCTGTCCAGAAGCTGCGAGCTTaGCTCGTGGTCAGGCTTGTT +
Preference number: 2 (lower is better)
Translates to: PFHYKLNVHRSGTHILPVQKLRA*LVVRLV
Trigger: AACAAGCCTGACCACGAGGCAAGCTCGCAGCTTCTG...GACAGGAAGGATGTGGGTGCCACTGCGGTGCACATTCAGCTTATAATGGAACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR GCA 90 bp CCGTTCCATTATAAGCTGAATGTGCACCGCAGTGGCACCCACATCCTTCCTGTCGCACCTCCAGGATGTTaGTCAGAAGCTGCGAGCTTG +
Preference number: 2 (lower is better)
Translates to: PFHYKLNVHRSGTHILPVAPPGC*SEAASL
Trigger: CAAGCTCGCAGCTTCTGAGCAACATCCTGGAGGTGC...GACAGGAAGGATGTGGGTGCCACTGCGGTGCACATTCAGCTTATAATGGAACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR GCA 90 bp CCCGGTCTGGAAGGAGCATTGTCAGACGAGTTTGAAGAGGTGGAAACCACAGAGCCGATGTGGGGAGACTaGCGGTTCATCCCAATCACT +
Preference number: 2 (lower is better)
Translates to: PGLEGALSDEFEEVETTEPMWGD*RFIPIT
Trigger: AGTGATTGGGATGAACCGGCAGTCTCCCCACATCGG...CTCTGTGGTTTCCACCTCTTCAAACTCGTCTGACAATGCTCCTTCCAGACCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR GCA 90 bp CTGCTGACCAGGAGGGCGAAGACCTCCCCAGAGCTGGAGAGGTATTTGTGTTTCCTGTCGTCCATTTGCTaGAGCAGGGCAATCATGCAA +
Preference number: 2 (lower is better)
Translates to: LLTRRAKTSPELERYLCFLSSIC*SRAIMQ
Trigger: TTGCATGATTGCCCTGCTGCAGCAAATGGACGACAG...GAAACACAAATACCTCTCCAGCTCTGGGGAGGTCTTCGCCCTCCTGGTCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CCA 90 bp AGAAGGTATCCAGACAGTGATGTATCCTATCTTCCCAGCCTCTGCTCAAAGACCCAGCAGGGAGCCCCATaGAATGAGGACACCGGCTGG +
Preference number: 2 (lower is better)
Translates to: RRYPDSDVSYLPSLCSKTQQGAP*NEDTGW
Trigger: CCAGCCGGTGTCCTCATTCCATGGGGCTCCCTGCTG...GGTCTTTGAGCAGAGGCTGGGAAGATAGGATACATCACTGTCTGGATACCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR CCA 90 bp CAGACTGGTAAGTCCCTTGTAGCCAGTGATTTGCGCTCAGAGGAGGTAATAGGAAACTGGCCGCTGAGCTaGTCTGTCAGCAGTGGCAGC +
Preference number: 2 (lower is better)
Translates to: QTGKSLVASDLRSEEVIGNWPLS*SVSSGS
Trigger: GCTGCCACTGCTGACAGACCAGCTCAGCGGCCAGTT...TCCTATTACCTCCTCTGAGCGCAAATCACTGGCTACAAGGGACTTACCAGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CCA 90 bp AGAGAGGGACCGGTCCCAGGCATGCTGCTGAACACAGTTGCTGATCCTCTCGTTGTTTATCCTTGTAGCTaGGCGGCAAGCTCATCACTG +
Preference number: 2 (lower is better)
Translates to: REGPVPGMLLNTVADPLVVYPCS*AASSSL
Trigger: CAGTGATGAGCTTGCCGCCCAGCTACAAGGATAAAC...AACGAGAGGATCAGCAACTGTGTTCAGCAGCATGCCTGGGACCGGTCCCTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR CAA 90 bp CTGCTGACCAGGAGGGCGAAGACCTCCCCAGAGCTGGAGAGGTATTaGTGTTTCCGGCAATGTTCTAGGAGCAGTTTTTCCAGAAGAACC +
Preference number: 2 (lower is better)
Translates to: LLTRRAKTSPELERY*CFRQCSRSSFSRRT
Trigger: GGTTCTTCTGGAAAAACTGCTCCTAGAACATTGCCGGAAACACAAATACCTCTCCAGCTCTGGGGAGGTCTTCGCCCTCCTGGTCAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR GCA 90 bp AGCAGCTGTCTAAGGCACTCGGTGTTGCAGGGAGGGCAAGATCCTTACTGGGATCCCAGGAAAGGTATATaGAGTCGTATACGTGGTCCG +
Preference number: 2 (lower is better)
Translates to: SSCLRHSVLQGGQDPYWDPRKGI*SRIRGP
Trigger: CGGACCACGTATACGACTGCATATACCTTTCCTGGG...ATCCCAGTAAGGATCTTGCCCTCCCTGCAACACCGAGTGCCTTAGACAGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CCA 90 bp TCTGGGCAAGGTTGTGGGAGAGACCACCAGCAAGTTTCCCCCAGTGCTGACCTCGGAAGGGAGGTGGCATaGCCTCAAAATTCTATCAAA +
Preference number: 2 (lower is better)
Translates to: SGQGCGRDHQQVSPSADLGREVA*PQNSIK
Trigger: TTTGATAGAATTTTGAGGCCATGCCACCTCCCTTCC...GAGGTCAGCACTGGGGGAAACTTGCTGGTGGTCTCTCCCACAACCTTGCCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR CCA 90 bp CTGCTGACCAGGAGGGCGAAGACCTCCCCAGAGCTGGAGAGGTATTTGTGTTTCAGATGCAATATGGGATaGGATCAGTGTGTCCACGTG +
Preference number: 2 (lower is better)
Translates to: LLTRRAKTSPELERYLCFRCNMG*DQCVHV
Trigger: CACGTGGACACACTGATCCCATCCCATATTGCATCT...GAAACACAAATACCTCTCCAGCTCTGGGGAGGTCTTCGCCCTCCTGGTCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CCA 90 bp CTTGATGTCTTCCCCAGGAGGCGTGGTACTGGTCATCTTCTCCGCATTGGGGAACGTGGTCAGGCTTGTTaGAGTTGTCATCTAACTGGC +
Preference number: 2 (lower is better)
Translates to: LDVFPRRRGTGHLLRIGERGQAC*SCHLTG
Trigger: GCCAGTTAGATGACAACTCCAACAAGCCTGACCACG...TTCCCCAATGCGGAGAAGATGACCAGTACCACGCCTCCTGGGGAAGACATCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CCA 90 bp CCCGGTCTGGAAGGAGCATTGTCAGACGAGTTTGAAGAGGTGGAAACCACAGAGACAAAACTCCCGATGTaGGGAGACTGCCGGTTCATC +
Preference number: 2 (lower is better)
Translates to: PGLEGALSDEFEEVETTETKLPM*GDCRFI
Trigger: GATGAACCGGCAGTCTCCCCACATCGGGAGTTTTGT...CTCTGTGGTTTCCACCTCTTCAAACTCGTCTGACAATGCTCCTTCCAGACCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR TCA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTTTCAACTCTGGCACCTaGCGAGGCCCTGCGCTCCAA +
Preference number: 2 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPFNSGT*RGPALQ
Trigger: TTGGAGCGCAGGGCCTCGTCAGGTGCCAGAGTTGAA...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR TCA 90 bp GGTTTTGGGCTGGTAAACATCATCCCAGATCAGGAAATGCAGTCAGCAGGGAGCGTGCTTTCTCTGCAATaGCCTGGGACTTGCTCAGAC +
Preference number: 2 (lower is better)
Translates to: GFGLVNIIPDQEMQSAGSVLSLQ*PGTCSD
Trigger: GTCTGAGCAAGTCCCAGGTCATTGCAGAGAAAGCAC...GCTCCCTGCTGACTGCATTTCCTGATCTGGGATGATGTTTACCAGCCCAAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR GCA 90 bp GGTTTTGGGCTGGTAAACATCATCCCAGATCAGGAAATGCAGTCAGCAGGGAGCGCGATTCCATCTGTCTaGAACGATGGGGAGCTTAGG +
Preference number: 2 (lower is better)
Translates to: GFGLVNIIPDQEMQSAGSAIPSV*NDGELR
Trigger: CCTAAGCTCCCCATCGTTGCAGACAGATGGAATCGC...GCTCCCTGCTGACTGCATTTCCTGATCTGGGATGATGTTTACCAGCCCAAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CCA 90 bp AGTTCCCGGAAGCAAGAAGACAACCGCTCATGCAGCGGCTTCAGCTGCTCTGTGGCTCCACCATCAATATaGAAGAACTTGTCCAGGCTT +
Preference number: 2 (lower is better)
Translates to: SSRKQEDNRSCSGFSCSVAPPSI*KNLSRL
Trigger: AAGCCTGGACAAGTTCTTCCATATTGATGGTGGAGC...CACAGAGCAGCTGAAGCCGCTGCATGAGCGGTTGTCTTCTTGCTTCCGGGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CCA 90 bp TTCTCTTCGGACAGGCAGTGGGGGAGCGAGCTCAGTGGAGTTCCTCTGGCTGCCTCACCATCCAATCTTTaGCATAGACATTCTTTCCAA +
Preference number: 2 (lower is better)
Translates to: FSSDRQWGSELSGVPLAASPSNL*HRHSFQ
Trigger: TTGGAAAGAATGTCTATGCCAAAGATTGGATGGTGA...GGCAGCCAGAGGAACTCCACTGAGCTCGCTCCCCCACTGCCTGTCCGAAGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CCA 90 bp TATGACTCTGGCTGGTTTGTGGAATTCTCAGTTTGTTCTACTTGTCTGCAGTGGGCCCCTGGTGGGACTTaGTCCCGGCAATGCTCTTGG +
Preference number: 2 (lower is better)
Translates to: YDSGWFVEFSVCSTCLQWAPGGT*SRQCSW
Trigger: CCAAGAGCATTGCCGGGACCAAGTCCCACCAGGGGC...CCACTGCAGACAAGTAGAACAAACTGAGAATTCCACAAACCAGCCAGAGTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481100.5
3UTR-3UTR TCA 90 bp CTCGGTGTTGCAGGGAGGGCAAGATCCTTACTGGGATCCAGGCTCGGAAGTAGGCTACCAAAGTGTACTTaGTATCCATCTCTTCCAAGA +
Preference number: 2 (lower is better)
Translates to: LGVAGRARSLLGSRLGSRLPKCT*YPSLPR
Trigger: TCTTGGAAGAGATGGATATCAAGTACACTTTGGTAG...CCTACTTCCGAGCCTGGATCCCAGTAAGGATCTTGCCCTCCCTGCAACACCGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR TCA 90 bp AGAAGGTATCCAGACAGTGATGTATCCTATCTTCCCAGCCTCTGCTCAAAGACCGTGACTGCGACGCAGTaGAGGCCATTAGTCAGGAGT +
Preference number: 2 (lower is better)
Translates to: RRYPDSDVSYLPSLCSKTVTATQ*RPLVRS
Trigger: ACTCCTGACTAATGGCCTTCACTGCGTCGCAGTCAC...GGTCTTTGAGCAGAGGCTGGGAAGATAGGATACATCACTGTCTGGATACCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR TCA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTTCTCTAAGAGGCTGCTaGCCAGGAGGGCGAAGACCT +
Preference number: 2 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPSLRGC*PGGRRP
Trigger: AGGTCTTCGCCCTCCTGGTCAGCAGCCTCTTAGAGA...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR GCA 90 bp GGTTTTGGGCTGGTAAACATCATCCCAGATCAGGAAATGCAGTCAGCAGGGAGCAGGGCAGCTTTCCTGTaGCACAAGAAGATGGGAGTT +
Preference number: 2 (lower is better)
Translates to: GFGLVNIIPDQEMQSAGSRAAFL*HKKMGV
Trigger: AACTCCCATCTTCTTGTGGCACAGGAAAGCTGCCCT...GCTCCCTGCTGACTGCATTTCCTGATCTGGGATGATGTTTACCAGCCCAAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
3UTR-3UTR GCA 90 bp CCGTTCCATTATAAGCTGAATGTGCACCGCAGTGGCACCCACATCCTTCCTGTCGCAGCAGCACTTCTCTaGACTCTGACTGTCGAAAAA +
Preference number: 2 (lower is better)
Translates to: PFHYKLNVHRSGTHILPVAAALL*TLTVEK
Trigger: TTTTTCGACAGTCAGAGTGCAGAGAAGTGCTGCTGC...GACAGGAAGGATGTGGGTGCCACTGCGGTGCACATTCAGCTTATAATGGAACGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR GCA 90 bp GCTTGTCAGACCACTGCAGAAGCTCAGCGTGCAAGAGAAGCGTGTAGGCAGCTTTTCTCACAGTCTCGGTaGAAATCTCGAAGCTTGTAC +
Preference number: 2 (lower is better)
Translates to: ACQTTAEAQRAREACRQLFSQSR*KSRSLY
Trigger: GTACAAGCTTCGAGATTTGCACCGAGACTGTGAGAA...AAGCTGCCTACACGCTTCTCTTGCACGCTGAGCTTCTGCAGTGGTCTGACAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR GCA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTGACCCCGTGCGGCTTTaGTTCCTCTCCGTCAAGTTG +
Preference number: 2 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPDPVRL*FLSVKL
Trigger: CAACTTGACGGAGAGGAAGCAAAGCCGCACGGGGTC...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CCA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTAATGAGGACACCGGCTaGAGGCCAGTTCTCAGGCAG +
Preference number: 2 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPNEDTG*RPVLRQ
Trigger: CTGCCTGAGAACTGGCCTCCAGCCGGTGTCCTCATT...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
3UTR-3UTR CCA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTCTTCCCCAGGAGGCGTaGTACTGGTCATCTTCTCCG +
Preference number: 2 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPLPQEA*YWSSSP
Trigger: CGGAGAAGATGACCAGTACCACGCCTCCTGGGGAAG...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CCA 90 bp AGCAGCTGTCTAAGGCACTCGGTGTTGCAGGGAGGGCAAGATCCTTACTGGGATTTGTGCTTTTCTGGTTaGGCTCATCAAATCGGGTTC +
Preference number: 2 (lower is better)
Translates to: SSCLRHSVLQGGQDPYWDLCFSG*AHQIGF
Trigger: GAACCCGATTTGATGAGCCCAACCAGAAAAGCACAA...ATCCCAGTAAGGATCTTGCCCTCCCTGCAACACCGAGTGCCTTAGACAGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CCA 90 bp AATATGGAGGGCCTCAGTAAAGCTCTGCAAGGATCCTTTCACATGCTCCCAGGCTACATCAGCATCACCTaGGAGCTTGTCAGAGGCAGA +
Preference number: 2 (lower is better)
Translates to: NMEGLSKALQGSFHMLPGYISIT*ELVRGR
Trigger: TCTGCCTCTGACAAGCTCCCAGGTGATGCTGATGTA...GCCTGGGAGCATGTGAAAGGATCCTTGCAGAGCTTTACTGAGGCCCTCCATATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
3UTR CAA 90 bp GGTTTTGAAAGTGCTGATGTAGTGGCTATAGTGGCTGTCGTCCATTaGCTGCAGCAGGGCAATCATGCAAGCCACAAAACTCCCGATGTG +
Preference number: 2 (lower is better)
Translates to: GFESADVVAIVAVVH*LQQGNHASHKTPDV
Trigger: CACATCGGGAGTTTTGTGGCTTGCATGATTGCCCTGCTGCAGCAAATGGACGACAGCCACTATAGCCACTACATCAGCACTTTCAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR TCA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTGTCCCTTGTAGCCAGTaGTTTGCGCTCAGAGGAGGT +
Preference number: 2 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPVPCSQ*FALRGG
Trigger: ACCTCCTCTGAGCGCAAATCACTGGCTACAAGGGAC...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
3UTR-3UTR TCA 90 bp CCATCTCTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAACGGCCGGGAGTATCTaGACTGCTGCACTTCATTGG +
Preference number: 2 (lower is better)
Translates to: PSLPRCNMGWDQCVHVRKTAGSI*TAALHW
Trigger: CCAATGAAGTGCAGCAGTTCAGATACTCCCGGCCGT...TTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAGAGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR GCA 90 bp CTTGATGTCTTCCCCAGGAGGCGTGGTACTGGTCATCTTCTCCGCATTGGGGAAGTAGATTACAGGGGTTaGTCCACCATCAATATGGAA +
Preference number: 2 (lower is better)
Translates to: LDVFPRRRGTGHLLRIGEVDYRG*STINME
Trigger: TTCCATATTGATGGTGGAGCAACCCCTGTAATCTAC...TTCCCCAATGCGGAGAAGATGACCAGTACCACGCCTCCTGGGGAAGACATCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR GCA 90 bp AGAAGGTATCCAGACAGTGATGTATCCTATCTTCCCAGCCTCTGCTCAAAGACCACTTCTCAGAAGTCGTaGCAGGCTCTAGGTAAGCCC +
Preference number: 2 (lower is better)
Translates to: RRYPDSDVSYLPSLCSKTTSQKS*QALGKP
Trigger: GGGCTTACCTAGAGCCTGGCACGACTTCTGAGAAGT...GGTCTTTGAGCAGAGGCTGGGAAGATAGGATACATCACTGTCTGGATACCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR GCA 90 bp GCTTGTCAGACCACTGCAGAAGCTCAGCGTGCAAGAGAAGCGTGTAGGCAGCTTCTCATGGGTGAGAAATaGAACTGCCAAATGGAAGTA +
Preference number: 2 (lower is better)
Translates to: ACQTTAEAQRAREACRQLLMGEK*NCQMEV
Trigger: TACTTCCATTTGGCAGTTGCATTTCTCACCCATGAG...AAGCTGCCTACACGCTTCTCTTGCACGCTGAGCTTCTGCAGTGGTCTGACAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CCA 90 bp CAGACTGGTAAGTCCCTTGTAGCCAGTGATTTGCGCTCAGAGGAGGTAATAGGATTCTGGAATTCCATGTaGACTGGAAGGGAGGTGGCA +
Preference number: 2 (lower is better)
Translates to: QTGKSLVASDLRSEEVIGFWNSM*TGREVA
Trigger: TGCCACCTCCCTTCCAGTCCACATGGAATTCCAGAA...TCCTATTACCTCCTCTGAGCGCAAATCACTGGCTACAAGGGACTTACCAGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
3UTR-3UTR CCA 90 bp CTGCTGACCAGGAGGGCGAAGACCTCCCCAGAGCTGGAGAGGTATTTGTGTTTCATGAATTTGATTTTGTaGGGACCCAGGTTATACCAC +
Preference number: 2 (lower is better)
Translates to: LLTRRAKTSPELERYLCFMNLIL*GPRLYH
Trigger: GTGGTATAACCTGGGTCCCCACAAAATCAAATTCAT...GAAACACAAATACCTCTCCAGCTCTGGGGAGGTCTTCGCCCTCCTGGTCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CCA 90 bp TATGACTCTGGCTGGTTTGTGGAATTCTCAGTTTGTTCTACTTGTCTGCAGTGGAACATGCAGGAACACTaGCCCATGGGTGGGTCAGCC +
Preference number: 2 (lower is better)
Translates to: YDSGWFVEFSVCSTCLQWNMQEH*PMGGSA
Trigger: GGCTGACCCACCCATGGGCCAGTGTTCCTGCATGTT...CCACTGCAGACAAGTAGAACAAACTGAGAATTCCACAAACCAGCCAGAGTCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
3UTR CAA 90 bp GCAATGACCTGGGACTTGCTCAGACTCCAGTCTTTTCTCTTAAACTaGCTGATCCGGTTCTCGCTGTTCTCCTCTCTAAGGGACAGATCT +
Preference number: 2 (lower is better)
Translates to: AMTWDLLRLQSFLLN*LIRFSLFSSLRDRS
Trigger: AGATCTGTCCCTTAGAGAGGAGAACAGCGAGAACCGGATCAGCAAGTTTAAGAGAAAAGACTGGAGTCTGAGCAAGTCCCAGGTCATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR TCA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTAGCAGATGCGGCTGCTaGGTCACCCAAATGGGTTTT +
Preference number: 2 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPSRCGC*VTQMGF
Trigger: AAAACCCATTTGGGTGACTCAGCAGCCGCATCTGCT...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
3UTR-3UTR TCA 90 bp GGTTTTGGGCTGGTAAACATCATCCCAGATCAGGAAATGCAGTCAGCAGGGAGCTACAGCACACCAGAGTaGACTGTCTTTGTATACTGG +
Preference number: 2 (lower is better)
Translates to: GFGLVNIIPDQEMQSAGSYSTPE*TVFVYW
Trigger: CCAGTATACAAAGACAGTTCACTCTGGTGTGCTGTA...GCTCCCTGCTGACTGCATTTCCTGATCTGGGATGATGTTTACCAGCCCAAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR TCA 90 bp CTTGATGTCTTCCCCAGGAGGCGTGGTACTGGTCATCTTCTCCGCATTGGGGAATTGTCAGGAATGCTTTaGATGAATTTGCAGAAGAGC +
Preference number: 2 (lower is better)
Translates to: LDVFPRRRGTGHLLRIGELSGML*MNLQKS
Trigger: GCTCTTCTGCAAATTCATTCAAAGCATTCCTGACAA...TTCCCCAATGCGGAGAAGATGACCAGTACCACGCCTCCTGGGGAAGACATCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR TCA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTAAGTGGCTCCAAGATTaGGCCATCAGATCCCGGTCT +
Preference number: 2 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPKWLQD*AIRSRS
Trigger: AGACCGGGATCTGATGGCTCAATCTTGGAGCCACTT...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR TCA 90 bp CACTTCTTCAGAGTGACACGGCTTGAATCTGCTCCCAACAGCTCCTCAATGGCCTGTTCAGCTCCTATCTaGCAATCTTGCAGCTTAGAA +
Preference number: 2 (lower is better)
Translates to: HFFRVTRLESAPNSSSMACSAPI*QSCSLE
Trigger: TTCTAAGCTGCAAGATTGTCAGATAGGAGCTGAACA...GGCCATTGAGGAGCTGTTGGGAGCAGATTCAAGCCGTGTCACTCTGAAGAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
3UTR-3UTR TCA 90 bp GGAACACTGGCCCATGGGTGGGTCAGCCCTTCACTCTCTCATCTCCTAAACCCTCAACATCAAGGACTTTaGATAAAGTCTTCTGTTCAG +
Preference number: 2 (lower is better)
Translates to: GTLAHGWVSPSLSHLLNPQHQGL*IKSSVQ
Trigger: CTGAACAGAAGACTTTATTCAAAGTCCTTGATGTTG...AGGGTTTAGGAGATGAGAGAGTGAAGGGCTGACCCACCCATGGGCCAGTGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
3UTR-3UTR GCA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTATGTTGCTCAGAAGCTaGGAGCTTGCCTCGTGGTCA +
Preference number: 2 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPMLLRS*ELASWS
Trigger: TGACCACGAGGCAAGCTCGCAGCTTCTGAGCAACAT...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR GCA 90 bp AGCAGCTGTCTAAGGCACTCGGTGTTGCAGGGAGGGCAAGATCCTTACTGGGATCGTAGTCAAATACTTTaGTTTCGTAAGTCTCAGCCA +
Preference number: 2 (lower is better)
Translates to: SSCLRHSVLQGGQDPYWDRSQIL*FRKSQP
Trigger: TGGCTGAGACTTACGAAAGCAAAGTATTTGACTACG...ATCCCAGTAAGGATCTTGCCCTCCCTGCAACACCGAGTGCCTTAGACAGCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CCA 90 bp CAGACTGGTAAGTCCCTTGTAGCCAGTGATTTGCGCTCAGAGGAGGTAATAGGACAAGAAGATGGGAGTTaGGTGGACTCAAGAACTCAG +
Preference number: 2 (lower is better)
Translates to: QTGKSLVASDLRSEEVIGQEDGS*VDSRTQ
Trigger: CTGAGTTCTTGAGTCCACCCAACTCCCATCTTCTTG...TCCTATTACCTCCTCTGAGCGCAAATCACTGGCTACAAGGGACTTACCAGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
3UTR-3UTR CCA 90 bp GCTTGTCAGACCACTGCAGAAGCTCAGCGTGCAAGAGAAGCGTGTAGGCAGCTTCAATTTTGTTGCGCTTaGCTTGTGAGAAGGTTTCAA +
Preference number: 2 (lower is better)
Translates to: ACQTTAEAQRAREACRQLQFCCA*LVRRFQ
Trigger: TTGAAACCTTCTCACAAGCCAAGCGCAACAAAATTG...AAGCTGCCTACACGCTTCTCTTGCACGCTGAGCTTCTGCAGTGGTCTGACAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CCA 90 bp CCATCTCTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAATCCGCATTGGGGAACTaGGTTAACAACCTCAGGCTG +
Preference number: 2 (lower is better)
Translates to: PSLPRCNMGWDQCVHVRKSALGN*VNNLRL
Trigger: CAGCCTGAGGTTGTTAACCCAGTTCCCCAATGCGGA...TTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAGAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR TCA 90 bp AATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACATCTGAGAGCTTTTGCGTCCCTTGTAGCCAGTaGTTTGCGCTCAGAGGAGGT +
Preference number: 2 (lower is better)
Translates to: NLHTHFLSNALDTSESFCVPCSQ*FALRGG
Trigger: ACCTCCTCTGAGCGCAAATCACTGGCTACAAGGGAC...GCAAAAGCTCTCAGATGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR TCA 90 bp TTCAGGCAGGAGAGAGCTATTATTTCCATTAAGGTGGAAAGGGAATCATACGGAAGTTTCCCCCAGTGCTaGCCTCTGCCTTCACAGTCA +
Preference number: 2 (lower is better)
Translates to: FRQERAIISIKVERESYGSFPQC*PLPSQS
Trigger: TGACTGTGAAGGCAGAGGTCAGCACTGGGGGAAACT...TCCGTATGATTCCCTTTCCACCTTAATGGAAATAATAGCTCTCTCCTGCCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR TCA 90 bp AGTTACAGACACTGGGGATTTCTTTCTGATCATACAATGGCGAAATCCACAGTCGTTAGGGGCATGTTCTaGACAGAGGGGCCACATCTC +
Preference number: 2 (lower is better)
Translates to: SYRHWGFLSDHTMAKSTVVRGMF*TEGPHL
Trigger: GAGATGTGGCCCCTCTGTTCAGAACATGCCCCTAAC...GACTGTGGATTTCGCCATTGTATGATCAGAAAGAAATCCCCAGTGTCTGTAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444569.5
3UTR-3UTR GCA 90 bp TCTGGTTTTGAAAGTGCTGATGTAGTGGCTATAGTGGCTGTCGTCCATTTGCTGAAGGTACTTCAAAGCTaGCCCCTTGATCTTGACGGC +
Preference number: 2 (lower is better)
Translates to: SGFESADVVAIVAVVHLLKVLQS*PLDLDG
Trigger: GCCGTCAAGATCAAGGGGGCAGCTTTGAAGTACCTT...CAGCAAATGGACGACAGCCACTATAGCCACTACATCAGCACTTTCAAAACCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR GCA 90 bp GGCTGGTTTGTGGAATTCTCAGTTTGTTCTACTTGTCTGCAGTGGCAGCTGCAAGCCTCAGTAAAGCTCTaGAAGGATCCTTTCACATGC +
Preference number: 2 (lower is better)
Translates to: GWFVEFSVCSTCLQWQLQASVKL*KDPFTC
Trigger: GCATGTGAAAGGATCCTTGCAGAGCTTTACTGAGGC...TTGCAGCTGCCACTGCAGACAAGTAGAACAAACTGAGAATTCCACAAACCAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
3UTR-3UTR CCA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTGTGAGTTTCTCCCCATaGATGCGGATCCCTTCTGTT +
Preference number: 2 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPVSFSP*MRIPSV
Trigger: AACAGAAGGGATCCGCATCCATGGGGAGAAACTCAC...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR CAA 90 bp ACTTCTCTGCACTCTGACTGTCGAAAAAGAGTGCTCTCTACTATCTaGGTCATGCAGTTAAGTTTCTGCCGAACCAGCTGGTTGTCAGGA +
Preference number: 2 (lower is better)
Translates to: TSLHSDCRKRVLSTI*VMQLSFCRTSWLSG
Trigger: TCCTGACAACCAGCTGGTTCGGCAGAAACTTAACTGCATGACCAAGATAGTAGAGAGCACTCTTTTTCGACAGTCAGAGTGCAGAGAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR CAA 90 bp AACCGTGAAATGGTGATAGCCGATTATCCATCAACTGGAGACTCTTaGGCCTTTGTGCTTTTCTGGTTGGGCTCATCAAATCGGGTTCTG +
Preference number: 2 (lower is better)
Translates to: NREMVIADYPSTGDS*AFVLFWLGSSNRVL
Trigger: CAGAACCCGATTTGATGAGCCCAACCAGAAAAGCACAAAGGCCAAAGAGTCTCCAGTTGATGGATAATCGGCTATCACCATTTCACGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR TCA 90 bp TCTGGTTTTGAAAGTGCTGATGTAGTGGCTATAGTGGCTGTCGTCCATTTGCTGATCAGAGGCTGTGACTaGTTCTGGAATTCCATGTGG +
Preference number: 2 (lower is better)
Translates to: SGFESADVVAIVAVVHLLIRGCD*FWNSMW
Trigger: CCACATGGAATTCCAGAATCAGTCACAGCCTCTGAT...CAGCAAATGGACGACAGCCACTATAGCCACTACATCAGCACTTTCAAAACCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR TCA 90 bp CCATCTCTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAACTCTGCCGTACAGGCTaGCATTTAACAATGGTGAAG +
Preference number: 2 (lower is better)
Translates to: PSLPRCNMGWDQCVHVRKLCRTG*HLTMVK
Trigger: CTTCACCATTGTTAAATGTCAGCCTGTACGGCAGAG...TTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAGAGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
3UTR-3UTR TCA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTTGGGGCTGTTTCCATTaGACACACTCAACCACTACA +
Preference number: 2 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPWGCFH*THSTTT
Trigger: TGTAGTGGTTGAGTGTGTTCAATGGAAACAGCCCCA...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR TCA 90 bp TATGACTCTGGCTGGTTTGTGGAATTCTCAGTTTGTTCTACTTGTCTGCAGTGGTGCACTTCTTCAGAGTaGCACGGCTTGAATCTGCTC +
Preference number: 2 (lower is better)
Translates to: YDSGWFVEFSVCSTCLQWCTSSE*HGLNLL
Trigger: GAGCAGATTCAAGCCGTGTCACTCTGAAGAAGTGCA...CCACTGCAGACAAGTAGAACAAACTGAGAATTCCACAAACCAGCCAGAGTCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
3UTR-3UTR GCA 90 bp CCCGGTCTGGAAGGAGCATTGTCAGACGAGTTTGAAGAGGTGGAAACCACAGAGTCTTCAGGATGCTCCTaGAAGTACTTTTCTGTAAAA +
Preference number: 2 (lower is better)
Translates to: PGLEGALSDEFEEVETTESSGCS*KYFSVK
Trigger: TTTTACAGAAAAGTACTTGCAGGAGCATCCTGAAGA...CTCTGTGGTTTCCACCTCTTCAAACTCGTCTGACAATGCTCCTTCCAGACCGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR GCA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTCAAATCGGGTTCTGGTaGTTTCTCTGCAATGACCTG +
Preference number: 2 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPQIGFW*FLCNDL
Trigger: CAGGTCATTGCAGAGAAAGCACCAGAACCCGATTTG...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CCA 90 bp ATGGGCATGTGGGAACTTTCTGGGGTGCTGAAAACAGTGTATGTCTCTATCTTAATCAGAGGGTTAAGGTaGAGGAGGAGGAAGCAACTC +
Preference number: 2 (lower is better)
Translates to: MGMWELSGVLKTVYVSILIRGLR*RRRKQL
Trigger: GAGTTGCTTCCTCCTCCTCCACCTTAACCCTCTGAT...TAAGATAGAGACATACACTGTTTTCAGCACCCCAGAAAGTTCCCACATGCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR CCA 90 bp GGTTTTGGGCTGGTAAACATCATCCCAGATCAGGAAATGCAGTCAGCAGGGAGCACTGCTGCACTTCATTaGCTCTGTAGTAGTTTAAGA +
Preference number: 2 (lower is better)
Translates to: GFGLVNIIPDQEMQSAGSTAALH*LCSSLR
Trigger: TCTTAAACTACTACAGAGCCAATGAAGTGCAGCAGT...GCTCCCTGCTGACTGCATTTCCTGATCTGGGATGATGTTTACCAGCCCAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CCA 90 bp CCATCTCTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAATGCAGTCGTATACGTaGTCCGTTCAATCCACATCG +
Preference number: 2 (lower is better)
Translates to: PSLPRCNMGWDQCVHVRKMQSYT*SVQSTS
Trigger: CGATGTGGATTGAACGGACCACGTATACGACTGCAT...TTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAGAGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR CAA 90 bp AGGGACCATCAGGTGAGTACCTCTTCTTTCCCATATTTCATCTCATaGAAACCTCACAACAACCGATGCAGGAGGCATTATCCCCATTCT +
Preference number: 2 (lower is better)
Translates to: RDHQVSTSSFPYFIS*KPHNNRCRRHYPHS
Trigger: AGAATGGGGATAATGCCTCCTGCATCGGTTGTTGTGAGGTTTCAATGAGATGAAATATGGGAAAGAAGAGGTACTCACCTGATGGTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR CAA 90 bp TACCACTCCCTTTCCAATCCTACAGCACACCAGAGTGAACTGTCTTaGTATACTGGGGCTGTTTCCATTGAACACACTCAACCACTACAT +
Preference number: 2 (lower is better)
Translates to: YHSLSNPTAHQSELS*YTGAVSIEHTQPLH
Trigger: ATGTAGTGGTTGAGTGTGTTCAATGGAAACAGCCCCAGTATACAAAGACAGTTCACTCTGGTGTGCTGTAGGATTGGAAAGGGAGTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR TCA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTATCAGTGTGTCCACGTaGGAAAAGTACCTAAGTCTC +
Preference number: 2 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPISVST*EKYLSL
Trigger: GAGACTTAGGTACTTTTCTCACGTGGACACACTGAT...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
3UTR-3UTR TCA 90 bp AGAAGGTATCCAGACAGTGATGTATCCTATCTTCCCAGCCTCTGCTCAAAGACCATAGACACACATACCTaGAAGCAGCCAATCTCCATT +
Preference number: 2 (lower is better)
Translates to: RRYPDSDVSYLPSLCSKTIDTHT*KQPISI
Trigger: AATGGAGATTGGCTGCTTTCAGGTATGTGTGTCTAT...GGTCTTTGAGCAGAGGCTGGGAAGATAGGATACATCACTGTCTGGATACCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR TCA 90 bp TCTCAAAGCCTGCTTTATATCTTGTTCTACATTAGGAAATTGCAGTGTGGCTGCGCAGGGACCATCAGGTaGGTACCTCTTCTTTCCCAT +
Preference number: 2 (lower is better)
Translates to: SQSLLYILFYIRKLQCGCAGTIR*VPLLSH
Trigger: ATGGGAAAGAAGAGGTACTCACCTGATGGTCCCTGC...GCAGCCACACTGCAATTTCCTAATGTAGAACAAGATATAAAGCAGGCTTTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR TCA 90 bp CCATCTCTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAAAGGTATCCAGACAGTaGTGTATCCTATCTTCCCAG +
Preference number: 2 (lower is better)
Translates to: PSLPRCNMGWDQCVHVRKKVSRQ*CILSSQ
Trigger: CTGGGAAGATAGGATACATCACTGTCTGGATACCTT...TTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAGAGATGG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR TCA 90 bp GGTTTTGGGCTGGTAAACATCATCCCAGATCAGGAAATGCAGTCAGCAGGGAGCAGAACTTCAGCAAACTaGTTTATAGCACGGAGAAAA +
Preference number: 2 (lower is better)
Translates to: GFGLVNIIPDQEMQSAGSRTSAN*FIARRK
Trigger: TTTTCTCCGTGCTATAAATCAGTTTGCTGAAGTTCT...GCTCCCTGCTGACTGCATTTCCTGATCTGGGATGATGTTTACCAGCCCAAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR GCA 90 bp CAACTGCCAAATGGAAGTAATTGTTCCAGAGCTGAAGTTCAAAGCTTGCCTGATAGGGCAGCTTTCCTGTaGCACAAGAAGATGGGAGTT +
Preference number: 2 (lower is better)
Translates to: QLPNGSNCSRAEVQSLPDRAAFL*HKKMGV
Trigger: AACTCCCATCTTCTTGTGGCACAGGAAAGCTGCCCT...ATCAGGCAAGCTTTGAACTTCAGCTCTGGAACAATTACTTCCATTTGGCAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR GCA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTGAGAAGGGCTGTATGTaGAGAACTAACTTGCACTCA +
Preference number: 2 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPEKGCM*RTNLHS
Trigger: TGAGTGCAAGTTAGTTCTGCACATACAGCCCTTCTC...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR GCA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTACATATCCTGTCTGTTaGCTCCTCCTTTCTCTACAG +
Preference number: 2 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPTYPVC*LLLSLQ
Trigger: CTGTAGAGAAAGGAGGAGGCAACAGACAGGATATGT...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR GCA 90 bp GGTTTTGGGCTGGTAAACATCATCCCAGATCAGGAAATGCAGTCAGCAGGGAGCGGTGAGAAATGCAACTaGCAAATGGAAGTAATTGTT +
Preference number: 2 (lower is better)
Translates to: GFGLVNIIPDQEMQSAGSGEKCN*QMEVIV
Trigger: AACAATTACTTCCATTTGGCAGTTGCATTTCTCACC...GCTCCCTGCTGACTGCATTTCCTGATCTGGGATGATGTTTACCAGCCCAAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CCA 90 bp CCACACCCCTTCCAGAATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACAACCCTCATGATGAACTaGTGTAGTTCTCTCCTGAAA +
Preference number: 2 (lower is better)
Translates to: PHPFQNLHTHFLSNALDTTLMMN*CSSLLK
Trigger: TTTCAGGAGAGAACTACACCAGTTCATCATGAGGGT...TGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATTCTGGAAGGGGTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR TCA 90 bp CCATCTCTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAACTTGGCAGAAGAAAATaGCTGCAATTCTGGAATCAG +
Preference number: 2 (lower is better)
Translates to: PSLPRCNMGWDQCVHVRKLGRRK*LQFWNQ
Trigger: CTGATTCCAGAATTGCAGTCATTTTCTTCTGCCAAG...TTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAGAGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR TCA 90 bp CTGAGTTTCCCAAATGAAAAGACCTACAGTTACAGACACTGGGGATTTCTTTCTAACATGGTAACAAAGTaGGGTAGGATGGGCTGGGGA +
Preference number: 2 (lower is better)
Translates to: LSFPNEKTYSYRHWGFLSNMVTK*GRMGWG
Trigger: TCCCCAGCCCATCCTACCTCACTTTGTTACCATGTT...AGAAAGAAATCCCCAGTGTCTGTAACTGTAGGTCTTTTCATTTGGGAAACTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444569.5
3UTR-3UTR GCA 90 bp GACACATTATTTATGAATTCTGTCAAATGTGACTCTTCCTACCCAACACCTTCCACTTGTCCAGGCTTGTaGAGACCACCATGTCTCTGC +
Preference number: 2 (lower is better)
Translates to: DTLFMNSVKCDSSYPTPSTCPGL*RPPCLC
Trigger: GCAGAGACATGGTGGTCTGCACAAGCCTGGACAAGT...GGAAGGTGTTGGGTAGGAAGAGTCACATTTGACAGAATTCATAAATAATGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR GCA 90 bp TTCAGGCAGGAGAGAGCTATTATTTCCATTAAGGTGGAAAGGGAATCATACGGAGGGACTCATTTCTACTaGTCTGGAAGGATAGCCTTG +
Preference number: 2 (lower is better)
Translates to: FRQERAIISIKVERESYGGTHFY*SGRIAL
Trigger: CAAGGCTATCCTTCCAGAGCAGTAGAAATGAGTCCC...TCCGTATGATTCCCTTTCCACCTTAATGGAAATAATAGCTCTCTCCTGCCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR CCA 90 bp ATGGGCATGTGGGAACTTTCTGGGGTGCTGAAAACAGTGTATGTCTCTATCTTATTCCAAGATGCAATATaGGATGGGATCAGTGTGTCC +
Preference number: 2 (lower is better)
Translates to: MGMWELSGVLKTVYVSILFQDAI*DGISVS
Trigger: GGACACACTGATCCCATCCCATATTGCATCTTGGAA...TAAGATAGAGACATACACTGTTTTCAGCACCCCAGAAAGTTCCCACATGCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR CAA 90 bp AGAGGACTGATCTCTTCTGTTGAAATCTGTTTGACTTCAAACCACTaGAGAATCCCAGGAAAGGTATATGCAGTCGTATACGTGGTCCGT +
Preference number: 2 (lower is better)
Translates to: RGLISSVEICLTSNH*RIPGKVYAVVYVVR
Trigger: ACGGACCACGTATACGACTGCATATACCTTTCCTGGGATTCTCAAGTGGTTTGAAGTCAAACAGATTTCAACAGAAGAGATCAGTCCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR TCA 90 bp AGCACGGAGAAAAACCCTGTTTTGAGTCATATTCATCACCATCCAATCTTTGGCATCAGTGTGTCCACGTaGGAAAAGTACCTAAGTCTC +
Preference number: 2 (lower is better)
Translates to: STEKNPVLSHIHHHPIFGISVST*EKYLSL
Trigger: GAGACTTAGGTACTTTTCTCACGTGGACACACTGAT...GCCAAAGATTGGATGGTGATGAATATGACTCAAAACAGGGTTTTTCTCCGTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR TCA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTTGTCCATCAGCATATTaGAAGCAAGAAATAACTGGC +
Preference number: 2 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPCPSAY*KQEITG
Trigger: GCCAGTTATTTCTTGCTTTCAATATGCTGATGGACA...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR GCA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTACTGTCGAAAAAGAGTaGTCTCTACTATCTTGGTCA +
Preference number: 2 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPTVEKE*SLLSWS
Trigger: TGACCAAGATAGTAGAGAGCACTCTTTTTCGACAGT...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CCA 90 bp AATTCCATGTGGACTGGAAGGGAGGTGGCATGGCCTCAAAATTCTATCAAAGAGTTGGAAGAACATGACTaGTTTTGGGCTGGTAAACAT +
Preference number: 2 (lower is better)
Translates to: NSMWTGREVAWPQNSIKELEEHD*FWAGKH
Trigger: ATGTTTACCAGCCCAAAACCAGTCATGTTCTTCCAA...CTCTTTGATAGAATTTTGAGGCCATGCCACCTCCCTTCCAGTCCACATGGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
3UTR-3UTR CCA 90 bp AGCACGGAGAAAAACCCTGTTTTGAGTCATATTCATCACCATCCAATCTTTGGCGGAAGGGAGGTGGCATaGCCTCAAAATTCTATCAAA +
Preference number: 2 (lower is better)
Translates to: STEKNPVLSHIHHHPIFGGREVA*PQNSIK
Trigger: TTTGATAGAATTTTGAGGCCATGCCACCTCCCTTCC...GCCAAAGATTGGATGGTGATGAATATGACTCAAAACAGGGTTTTTCTCCGTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CCA 90 bp CTGAGTTTCCCAAATGAAAAGACCTACAGTTACAGACACTGGGGATTTCTTTCTCGCTTGTGGAGAATGTaGGAGGTGGTGAGTAAAAGA +
Preference number: 2 (lower is better)
Translates to: LSFPNEKTYSYRHWGFLSRLWRM*EVVSKR
Trigger: TCTTTTACTCACCACCTCCCACATTCTCCACAAGCG...AGAAAGAAATCCCCAGTGTCTGTAACTGTAGGTCTTTTCATTTGGGAAACTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444569.5
3UTR CAA 90 bp AATTTGCAGAAGAGCACGCTGAGCTCAACAGGATCAAATACAAGTTaGACATCATTAATTATGCTAGGAAGGTACTTCAAAGCTGCCCCC +
Preference number: 2 (lower is better)
Translates to: NLQKSTLSSTGSNTS*TSLIMLGRYFKAAP
Trigger: GGGGGCAGCTTTGAAGTACCTTCCTAGCATAATTAATGATGTCAAACTTGTATTTGATCCTGTTGAGCTCAGCGTGCTCTTCTGCAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR TCA 90 bp CTGAGTTTCCCAAATGAAAAGACCTACAGTTACAGACACTGGGGATTTCTTTCTGGGAGGAGCAAAGAGTaGGAAATAAAGGTTCCTGTT +
Preference number: 2 (lower is better)
Translates to: LSFPNEKTYSYRHWGFLSGRSKE*EIKVPV
Trigger: AACAGGAACCTTTATTTCTCACTCTTTGCTCCTCCC...AGAAAGAAATCCCCAGTGTCTGTAACTGTAGGTCTTTTCATTTGGGAAACTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
3UTR-3UTR TCA 90 bp TATGACTCTGGCTGGTTTGTGGAATTCTCAGTTTGTTCTACTTGTCTGCAGTGGGTGTTAAAAGACAATTaGATGGCTAATCCAGGTCTC +
Preference number: 2 (lower is better)
Translates to: YDSGWFVEFSVCSTCLQWVLKDN*MANPGL
Trigger: GAGACCTGGATTAGCCATTCAATTGTCTTTTAACAC...CCACTGCAGACAAGTAGAACAAACTGAGAATTCCACAAACCAGCCAGAGTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481100.5
3UTR-3UTR CCA 90 bp GACACATTATTTATGAATTCTGTCAAATGTGACTCTTCCTACCCAACACCTTCCAGATGCAATATGGGATaGGATCAGTGTGTCCACGTG +
Preference number: 2 (lower is better)
Translates to: DTLFMNSVKCDSSYPTPSRCNMG*DQCVHV
Trigger: CACGTGGACACACTGATCCCATCCCATATTGCATCT...GGAAGGTGTTGGGTAGGAAGAGTCACATTTGACAGAATTCATAAATAATGTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR CCA 90 bp ACCCTATCTATCTACTGTTCAAAGCCAACAACAATGGCACTATTAGCTAGACTGAGGCCCTCCATATCATaGGTTCAACCAACTGATGAT +
Preference number: 2 (lower is better)
Translates to: TLSIYCSKPTTMALLARLRPSIS*VQPTDD
Trigger: ATCATCAGTTGGTTGAACCCATGATATGGAGGGCCT...CAGTCTAGCTAATAGTGCCATTGTTGTTGGCTTTGAACAGTAGATAGATAGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410074.5
3UTR-3UTR CCA 90 bp ATGAGAAAGGAAGCCACAAATTTGAAGGGCCTTATAAATACCTTTCACAAAATGTTCTGGAATTCCATGTaGACTGGAAGGGAGGTGGCA +
Preference number: 2 (lower is better)
Translates to: MRKEATNLKGLINTFHKMFWNSM*TGREVA
Trigger: TGCCACCTCCCTTCCAGTCCACATGGAATTCCAGAA...CATTTTGTGAAAGGTATTTATAAGGCCCTTCAAATTTGTGGCTTCCTTTCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR CCA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTTTTAATGGATTTCCTTaGCAGAAGAAAATGACTGCA +
Preference number: 2 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPFNGFP*QKKMTA
Trigger: TGCAGTCATTTTCTTCTGCCAAGGAAATCCATTAAA...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR CCA 90 bp TATGACTCTGGCTGGTTTGTGGAATTCTCAGTTTGTTCTACTTGTCTGCAGTGGCCTTCTCTGAGAAAATaGTTTCTAACACCTGTTTCT +
Preference number: 2 (lower is better)
Translates to: YDSGWFVEFSVCSTCLQWPSLRK*FLTPVS
Trigger: AGAAACAGGTGTTAGAAACCATTTTCTCAGAGAAGG...CCACTGCAGACAAGTAGAACAAACTGAGAATTCCACAAACCAGCCAGAGTCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481100.5
3UTR CAA 90 bp CTAGTCATAAATAATCATGTAAAAGACCTCAAAGGAAACCACCATTaGGAGAAGGGCTGTATGTGCAGAACTAACTTGCACTCACATTCC +
Preference number: 2 (lower is better)
Translates to: LVINNHVKDLKGNHH*EKGCMCRTNLHSHS
Trigger: GGAATGTGAGTGCAAGTTAGTTCTGCACATACAGCCCTTCTCCAAATGGTGGTTTCCTTTGAGGTCTTTTACATGATTATTTATGACTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR CAA 90 bp GAGGAGAAGGACTCTTCCAGCTTGGAAAGAGTAAACAAAGGTAGGTaGTTGTCTCAAAGCCTGCTTTATATCTTGTTCTACATTAGGAAA +
Preference number: 2 (lower is better)
Translates to: EEKDSSSLERVNKGR*LSQSLLYILFYIRK
Trigger: TTTCCTAATGTAGAACAAGATATAAAGCAGGCTTTGAGACAACAACCTACCTTTGTTTACTCTTTCCAAGCTGGAAGAGTCCTTCTCCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR TCA 90 bp ATGAGAAAGGAAGCCACAAATTTGAAGGGCCTTATAAATACCTTTCACAAAATGATCAGAGGCTGTGACTaGTTCTGGAATTCCATGTGG +
Preference number: 2 (lower is better)
Translates to: MRKEATNLKGLINTFHKMIRGCD*FWNSMW
Trigger: CCACATGGAATTCCAGAATCAGTCACAGCCTCTGAT...CATTTTGTGAAAGGTATTTATAAGGCCCTTCAAATTTGTGGCTTCCTTTCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR GCA 90 bp GACACATTATTTATGAATTCTGTCAAATGTGACTCTTCCTACCCAACACCTTCCGTAGATTACAGGGGTTaGTCCACCATCAATATGGAA +
Preference number: 2 (lower is better)
Translates to: DTLFMNSVKCDSSYPTPSVDYRG*STINME
Trigger: TTCCATATTGATGGTGGAGCAACCCCTGTAATCTAC...GGAAGGTGTTGGGTAGGAAGAGTCACATTTGACAGAATTCATAAATAATGTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR CCA 90 bp ATGAGAAAGGAAGCCACAAATTTGAAGGGCCTTATAAATACCTTTCACAAAATGCAAGAAGATGGGAGTTaGGTGGACTCAAGAACTCAG +
Preference number: 2 (lower is better)
Translates to: MRKEATNLKGLINTFHKMQEDGS*VDSRTQ
Trigger: CTGAGTTCTTGAGTCCACCCAACTCCCATCTTCTTG...CATTTTGTGAAAGGTATTTATAAGGCCCTTCAAATTTGTGGCTTCCTTTCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR CCA 90 bp GACACATTATTTATGAATTCTGTCAAATGTGACTCTTCCTACCCAACACCTTCCTCATTTCTACTGCTCTaGAAGGATAGCCTTGAGGTT +
Preference number: 2 (lower is better)
Translates to: DTLFMNSVKCDSSYPTPSSFLLL*KDSLEV
Trigger: AACCTCAAGGCTATCCTTCCAGAGCAGTAGAAATGA...GGAAGGTGTTGGGTAGGAAGAGTCACATTTGACAGAATTCATAAATAATGTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR TCA 90 bp GACACATTATTTATGAATTCTGTCAAATGTGACTCTTCCTACCCAACACCTTCCCTACCAAAGTGTACTTaGTATCCATCTCTTCCAAGA +
Preference number: 2 (lower is better)
Translates to: DTLFMNSVKCDSSYPTPSLPKCT*YPSLPR
Trigger: TCTTGGAAGAGATGGATATCAAGTACACTTTGGTAG...GGAAGGTGTTGGGTAGGAAGAGTCACATTTGACAGAATTCATAAATAATGTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR GCA 90 bp AATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACATCTGAGAGCTTTTGCAAAAGCTTTCTGCTTTaGCACAAATATCTAAGTAGC +
Preference number: 2 (lower is better)
Translates to: NLHTHFLSNALDTSESFCKSFLL*HKYLSS
Trigger: GCTACTTAGATATTTGTGGCAAAGCAGAAAGCTTTT...GCAAAAGCTCTCAGATGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR GCA 90 bp ATGAGAAAGGAAGCCACAAATTTGAAGGGCCTTATAAATACCTTTCACAAAATGACATCTGAGAGCTTTTaGTTCCCTGACCCTCATGAT +
Preference number: 2 (lower is better)
Translates to: MRKEATNLKGLINTFHKMTSESF*FPDPHD
Trigger: ATCATGAGGGTCAGGGAAGCAAAAGCTCTCAGATGT...CATTTTGTGAAAGGTATTTATAAGGCCCTTCAAATTTGTGGCTTCCTTTCTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR GCA 90 bp ATGCAAGACTTATATGCAGAAAACTTTCACACGCCATTGAAGGGCACAAAAGCATTGTTCAGTTTGAGCTaGATATTGGCCAATCAAAGT +
Preference number: 2 (lower is better)
Translates to: MQDLYAENFHTPLKGTKALFSLS*ILANQS
Trigger: ACTTTGATTGGCCAATATGCAGCTCAAACTGAACAA...TGCTTTTGTGCCCTTCAATGGCGTGTGAAAGTTTTCTGCATATAAGTCTTGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
3UTR-3UTR CCA 90 bp ATGAGAAAGGAAGCCACAAATTTGAAGGGCCTTATAAATACCTTTCACAAAATGGCTCCACCATCAATATaGAAGAACTTGTCCAGGCTT +
Preference number: 2 (lower is better)
Translates to: MRKEATNLKGLINTFHKMAPPSI*KNLSRL
Trigger: AAGCCTGGACAAGTTCTTCCATATTGATGGTGGAGC...CATTTTGTGAAAGGTATTTATAAGGCCCTTCAAATTTGTGGCTTCCTTTCTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR CAA 90 bp GAAATAAAGGTTCCTGTTACCGCCTTGTTCAGTTTGAGCTGCATATaGGCCAATCAAAGTTTATATGTAAATCCAAAGTTAGAGAAGGTG +
Preference number: 2 (lower is better)
Translates to: EIKVPVTALFSLSCI*ANQSLYVNPKLEKV
Trigger: CACCTTCTCTAACTTTGGATTTACATATAAACTTTGATTGGCCAATATGCAGCTCAAACTGAACAAGGCGGTAACAGGAACCTTTATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444569.5
3UTR-3UTR TCA 90 bp TCTCTAGTCATAAATAATCATGTAAAAGACCTCAAAGGAAACCACCATTTGGAGCATATTTCATCTCATTaGAACCTCACAACAACCGAT +
Preference number: 2 (lower is better)
Translates to: SLVINNHVKDLKGNHHLEHISSH*NLTTTD
Trigger: ATCGGTTGTTGTGAGGTTTCAATGAGATGAAATATG...CTCCAAATGGTGGTTTCCTTTGAGGTCTTTTACATGATTATTTATGACTAGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR GCA 72 bp GGCACGATGGCCCCTGGTGGGACTTGGTCCCGGCAATaGTCTTGGCCTCCACTAGGCCTCCACTGCCTGTGC +
Preference number: 3 (lower is better)
Translates to: GTMAPGGTWSRQ*SWPPLGLHCLC
Trigger: GCACAGGCAGTGGAGGCCTAGTGGAGGCCAAGAGCATTGCCGGGACCAAGTCCCACCAGGGGCCATCGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481100.5
3UTR CCA 72 bp TGCCCTCTGACTGGCACGATGGCCCCTGGTGGGACTTaGTCCCGGCAATGCTCTTGGCCTCCACTAGGCCTC +
Preference number: 3 (lower is better)
Translates to: CPLTGTMAPGGT*SRQCSWPPLGL
Trigger: GAGGCCTAGTGGAGGCCAAGAGCATTGCCGGGACCAAGTCCCACCAGGGGCCATCGTGCCAGTCAGAGGGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481100.5
3UTR CCA 72 bp AGGGGGTGGTGCTTTGGCTTCTCTTCGGACAGGCAGTaGGGGAGCGAGCTCAGTGGAGTTCCTCTGGCTGCC +
Preference number: 3 (lower is better)
Translates to: RGWCFGFSSDRQ*GSELSGVPLAA
Trigger: GGCAGCCAGAGGAACTCCACTGAGCTCGCTCCCCCACTGCCTGTCCGAAGAGAAGCCAAAGCACCACCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR CCA 72 bp GATGCCAGACTTCCGAGCCTTTGGAGGTGGAGGGGGTaGTGCTTTGGCTTCTCTTCGGACAGGCAGTGGGGG +
Preference number: 3 (lower is better)
Translates to: DARLPSLWRWRG*CFGFSSDRQWG
Trigger: CCCCCACTGCCTGTCCGAAGAGAAGCCAAAGCACCACCCCCTCCACCTCCAAAGGCTCGGAAGTCTGGCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR CCA 72 bp GAGATGATGCCCTCTGACTGGCACGATGGCCCCTGGTaGGACTTGGTCCCGGCAATGCTCTTGGCCTCCACT +
Preference number: 3 (lower is better)
Translates to: EMMPSDWHDGPW*DLVPAMLLAST
Trigger: AGTGGAGGCCAAGAGCATTGCCGGGACCAAGTCCCACCAGGGGCCATCGTGCCAGTCAGAGGGCATCATCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481100.5
3UTR TCA 72 bp GGGTGCACAGAGAGGGACCGGTCCCAGGCATGCTGCTaGACACAGTTGCTGATCCTCTCGTTGGTCAGCTCC +
Preference number: 3 (lower is better)
Translates to: GCTERDRSQACC*TQLLILSLVSS
Trigger: GGAGCTGACCAACGAGAGGATCAGCAACTGTGTTCAGCAGCATGCCTGGGACCGGTCCCTCTCTGTGCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR GCA 72 bp GGAGGTGGGACAGGAGTGGCCGCGATTCCATCTGTCTaGAACGATGGGGAGCTTAGGGTCCTGGTGGCTTTG +
Preference number: 3 (lower is better)
Translates to: GGGTGVAAIPSV*NDGELRVLVAL
Trigger: CAAAGCCACCAGGACCCTAAGCTCCCCATCGTTGCAGACAGATGGAATCGCGGCCACTCCTGTCCCACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR CCA 72 bp AGTCAGCAGGGAGCCCCATGGAATGAGGACACCGGCTaGAGGCCAGTTCTCAGGCAGCAGCTGTCTAAGGCA +
Preference number: 3 (lower is better)
Translates to: SQQGAPWNEDTG*RPVLRQQLSKA
Trigger: TGCCTTAGACAGCTGCTGCCTGAGAACTGGCCTCCAGCCGGTGTCCTCATTCCATGGGGCTCCCTGCTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
3UTR CCA 72 bp CTCCCAGGCTGGCTTTCCCCCAACATGCAGGAACACTaGCCCATGGGTGGGTCAGCCCTTCACTCTCTCATC +
Preference number: 3 (lower is better)
Translates to: LPGWLSPNMQEH*PMGGSALHSLI
Trigger: GATGAGAGAGTGAAGGGCTGACCCACCCATGGGCCAGTGTTCCTGCATGTTGGGGGAAAGCCAGCCTGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481100.5
3UTR TCA 72 bp GATCAGGAAATGCAGTCAGCAGGGAGCCCCATGGAATaGGGACACCGGCTGGAGGCCAGTTCTCAGGCAGCA +
Preference number: 3 (lower is better)
Translates to: DQEMQSAGSPME*GHRLEASSQAA
Trigger: TGCTGCCTGAGAACTGGCCTCCAGCCGGTGTCCTCATTCCATGGGGCTCCCTGCTGACTGCATTTCCTGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
3UTR TCA 72 bp ACGATGGGGAGCTTAGGGTCCTGGTGGCTTTGGGAGTaGGTGGAGGTGGGCTCAAGGGTGTTGACTGAGGAG +
Preference number: 3 (lower is better)
Translates to: TMGSLGSWWLWE*VEVGSRVLTEE
Trigger: CTCCTCAGTCAACACCCTTGAGCCCACCTCCACTCACTCCCAAAGCCACCAGGACCCTAAGCTCCCCATCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR TCA 72 bp GGCCTCCACTGCCTGTGCAGGTGCTGGAGCAGGTCATaGCGTTCACACCTGCACTTCTTCAGAGTGACACGG +
Preference number: 3 (lower is better)
Translates to: GLHCLCRCWSRS*RSHLHFFRVTR
Trigger: CCGTGTCACTCTGAAGAAGTGCAGGTGTGAACGTCATGACCTGCTCCAGCACCTGCACAGGCAGTGGAGGCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
3UTR CCA 72 bp GCCTCGTGGTCAGGCTTGTTGGAGTTGTCATCTAACTaGCCGCTGAGCTGGTCTGTCAGCAGTGGCAGCAGC +
Preference number: 3 (lower is better)
Translates to: ASWSGLLELSSN*PLSWSVSSGSS
Trigger: GCTGCTGCCACTGCTGACAGACCAGCTCAGCGGCCAGTTAGATGACAACTCCAACAAGCCTGACCACGAGGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR CCA 72 bp AGGCTCGGAAGTAGGGATGCCAGACTTCCGAGCCTTTaGAGGTGGAGGGGGTGGTGCTTTGGCTTCTCTTCG +
Preference number: 3 (lower is better)
Translates to: RLGSRDARLPSL*RWRGWCFGFSS
Trigger: CGAAGAGAAGCCAAAGCACCACCCCCTCCACCTCCAAAGGCTCGGAAGTCTGGCATCCCTACTTCCGAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CAA 90 bp CTCGGTGTTGCAGGGAGGGCAAGATCCTTACTGGGATCCAGGCTCGGAAGTAGGCCAATCACTGTCCGGTaGATCCTTCTCAGCAGCCGT +
Preference number: 3 (lower is better)
Translates to: LGVAGRARSLLGSRLGSRPITVR*ILLSSR
Trigger: ACGGCTGCTGAGAAGGATCAACCGGACAGTGATTGG...CCTACTTCCGAGCCTGGATCCCAGTAAGGATCTTGCCCTCCCTGCAACACCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR TCA 72 bp GGGACCGGTCCCAGGCATGCTGCTGAACACAGTTGCTaGTCCTCTCGTTGGTCAGCTCCATGGTTTCGATGG +
Preference number: 3 (lower is better)
Translates to: GTGPRHAAEHSC*SSRWSAPWFRW
Trigger: CCATCGAAACCATGGAGCTGACCAACGAGAGGATCAGCAACTGTGTTCAGCAGCATGCCTGGGACCGGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CAA 90 bp GCTTGTCAGACCACTGCAGAAGCTCAGCGTGCAAGAGAAGCGTGTAGGCAGCTTTCAGAAGCTGCGAGCTaGCCTCGTGGTCAGGCTTGT +
Preference number: 3 (lower is better)
Translates to: ACQTTAEAQRAREACRQLSEAAS*PRGQAC
Trigger: ACAAGCCTGACCACGAGGCAAGCTCGCAGCTTCTGA...AAGCTGCCTACACGCTTCTCTTGCACGCTGAGCTTCTGCAGTGGTCTGACAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR TCA 72 bp TGGTTCTATAGTCCAGCAGGTTCTCTAAGAGGCTGCTaGCCAGGAGGGCGAAGACCTCCCCAGAGCTGGAGA +
Preference number: 3 (lower is better)
Translates to: WFYSPAGSLRGC*PGGRRPPQSWR
Trigger: TCTCCAGCTCTGGGGAGGTCTTCGCCCTCCTGGTCAGCAGCCTCTTAGAGAACCTGCTGGACTATAGAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR GCA 72 bp GGGACAGATCTTCAACTCTGGCACCTGACGAGGCCCTaGGCTCCAAAAGTGGCTCCAAGATTGAGCCATCAG +
Preference number: 3 (lower is better)
Translates to: GTDLQLWHLTRP*APKVAPRLSHQ
Trigger: CTGATGGCTCAATCTTGGAGCCACTTTTGGAGCGCAGGGCCTCGTCAGGTGCCAGAGTTGAAGATCTGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR CCA 72 bp TGCAGCGGCTTCAGCTGCTCTGTGAGTTTCTCCCCATaGATGCGGATCCCTTCTGTTAGCAGGGGCATCTGT +
Preference number: 3 (lower is better)
Translates to: CSGFSCSVSFSP*MRIPSVSRGIC
Trigger: ACAGATGCCCCTGCTAACAGAAGGGATCCGCATCCATGGGGAGAAACTCACAGAGCAGCTGAAGCCGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR CCA 72 bp GCTTTCCCCCAACATGCAGGAACACTGGCCCATGGGTaGGTCAGCCCTTCACTCTCTCATCTCCTAAACCCT +
Preference number: 3 (lower is better)
Translates to: AFPQHAGTLAHG*VSPSLSHLLNP
Trigger: AGGGTTTAGGAGATGAGAGAGTGAAGGGCTGACCCACCCATGGGCCAGTGTTCCTGCATGTTGGGGGAAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481100.5
3UTR-3UTR CAA 90 bp CTGCTGACCAGGAGGGCGAAGACCTCCCCAGAGCTGGAGAGGTATTTGTGTTTCGCCTCGTGGTCAGGCTaGTTGGAGTTGTCATCTAAC +
Preference number: 3 (lower is better)
Translates to: LLTRRAKTSPELERYLCFASWSG*LELSSN
Trigger: GTTAGATGACAACTCCAACAAGCCTGACCACGAGGC...GAAACACAAATACCTCTCCAGCTCTGGGGAGGTCTTCGCCCTCCTGGTCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CAA 90 bp AGTTCCCGGAAGCAAGAAGACAACCGCTCATGCAGCGGCTTCAGCTGCTCTGTGGTCTCAGCCAACTCTTaGCTCAGCTTGATGGCCTTC +
Preference number: 3 (lower is better)
Translates to: SSRKQEDNRSCSGFSCSVVSANS*LSLMAF
Trigger: GAAGGCCATCAAGCTGAGCAAAGAGTTGGCTGAGAC...CACAGAGCAGCTGAAGCCGCTGCATGAGCGGTTGTCTTCTTGCTTCCGGGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CAA 90 bp TTCTCTTCGGACAGGCAGTGGGGGAGCGAGCTCAGTGGAGTTCCTCTGGCTGCCTTTGTGCTTTTCTGGTaGGGCTCATCAAATCGGGTT +
Preference number: 3 (lower is better)
Translates to: FSSDRQWGSELSGVPLAAFVLFW*GSSNRV
Trigger: AACCCGATTTGATGAGCCCAACCAGAAAAGCACAAA...GGCAGCCAGAGGAACTCCACTGAGCTCGCTCCCCCACTGCCTGTCCGAAGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR TCA 72 bp CTCCTCTCTAAGGGACAGATCTTCAACTCTGGCACCTaGCGAGGCCCTGCGCTCCAAAAGTGGCTCCAAGAT +
Preference number: 3 (lower is better)
Translates to: LLSKGQIFNSGT*RGPALQKWLQD
Trigger: ATCTTGGAGCCACTTTTGGAGCGCAGGGCCTCGTCAGGTGCCAGAGTTGAAGATCTGTCCCTTAGAGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR GCA 72 bp TCCTTGAGTTCCCGGAAGCAAGAAGACAACCGCTCATaGAGCGGCTTCAGCTGCTCTGTGAGTTTCTCCCCA +
Preference number: 3 (lower is better)
Translates to: SLSSRKQEDNRS*SGFSCSVSFSP
Trigger: TGGGGAGAAACTCACAGAGCAGCTGAAGCCGCTGCATGAGCGGTTGTCTTCTTGCTTCCGGGAACTCAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR GCA 72 bp AGGGCCTCAGTAAAGCTCTGCAAGGATCCTTTCACATaGTCCCAGGCTGGCTTTCCCCCAACATGCAGGAAC +
Preference number: 3 (lower is better)
Translates to: RASVKLCKDPFT*SQAGFPPTCRN
Trigger: GTTCCTGCATGTTGGGGGAAAGCCAGCCTGGGAGCATGTGAAAGGATCCTTGCAGAGCTTTACTGAGGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481100.5
3UTR CCA 72 bp TCCAGGATGTTGCTCAGAAGCTGCGAGCTTGCCTCGTaGTCAGGCTTGTTGGAGTTGTCATCTAACTGGCCG +
Preference number: 3 (lower is better)
Translates to: SRMLLRSCELAS*SGLLELSSNWP
Trigger: CGGCCAGTTAGATGACAACTCCAACAAGCCTGACCACGAGGCAAGCTCGCAGCTTCTGAGCAACATCCTGGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR TCA 72 bp GACACCAAACAGGAGGCTGCTGTAGTGCTCAAGGTGTaGCATGCTTACGGGATGGACCAAGGTGGTAGTCAG +
Preference number: 3 (lower is better)
Translates to: DTKQEAAVVLKV*HAYGMDQGGSQ
Trigger: CTGACTACCACCTTGGTCCATCCCGTAAGCATGTCACACCTTGAGCACTACAGCAGCCTCCTGTTTGGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444569.5
3UTR TCA 72 bp CGGTTGATCCTTCTCAGCAGCCGTTCCATTATAAGCTaGATGTGCACCGCAGTGGCACCCACATCCTTCCTG +
Preference number: 3 (lower is better)
Translates to: RLILLSSRSIIS*MCTAVAPTSFL
Trigger: CAGGAAGGATGTGGGTGCCACTGCGGTGCACATTCAGCTTATAATGGAACGGCTGCTGAGAAGGATCAACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR GCA 72 bp TCTTCTTCCAGTGTGGCCCAAGGACCATGGCCAGTCTaGAAACAGTCTGGACCCATCCGTAGGAAAGAAGGA +
Preference number: 3 (lower is better)
Translates to: SSSSVAQGPWPV*KQSGPIRRKEG
Trigger: TCCTTCTTTCCTACGGATGGGTCCAGACTGTTTGCAGACTGGCCATGGTCCTTGGGCCACACTGGAAGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CAA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTGCTGCCCCCTTGATCTaGACGGCTTCCTCCAGAGGC +
Preference number: 3 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPAAPLI*TASSRG
Trigger: GCCTCTGGAGGAAGCCGTCAAGATCAAGGGGGCAGC...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CAA 90 bp GGTTTTGGGCTGGTAAACATCATCCCAGATCAGGAAATGCAGTCAGCAGGGAGCTTCAAAGCTGCCCCCTaGATCTTGACGGCTTCCTCC +
Preference number: 3 (lower is better)
Translates to: GFGLVNIIPDQEMQSAGSFKAAP*ILTASS
Trigger: GGAGGAAGCCGTCAAGATCAAGGGGGCAGCTTTGAA...GCTCCCTGCTGACTGCATTTCCTGATCTGGGATGATGTTTACCAGCCCAAAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CAA 90 bp TTCTCTTCGGACAGGCAGTGGGGGAGCGAGCTCAGTGGAGTTCCTCTGGCTGCCGTTGTCAGGAATGCTTaGAATGAATTTGCAGAAGAG +
Preference number: 3 (lower is better)
Translates to: FSSDRQWGSELSGVPLAAVVRNA*NEFAEE
Trigger: CTCTTCTGCAAATTCATTCAAAGCATTCCTGACAAC...GGCAGCCAGAGGAACTCCACTGAGCTCGCTCCCCCACTGCCTGTCCGAAGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR TCA 72 bp GCAGGTCATGACGTTCACACCTGCACTTCTTCAGAGTaGCACGGCTTGAATCTGCTCCCAACAGCTCCTCAA +
Preference number: 3 (lower is better)
Translates to: AGHDVHTCTSSE*HGLNLLPTAPQ
Trigger: TTGAGGAGCTGTTGGGAGCAGATTCAAGCCGTGTCACTCTGAAGAAGTGCAGGTGTGAACGTCATGACCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
3UTR GCA 72 bp ATCATGCAAGCCACAAAACTCCCGATGTGGGGAGACTaGCGGTTCATCCCAATCACTGTCCGGTTGATCCTT +
Preference number: 3 (lower is better)
Translates to: IMQATKLPMWGD*RFIPITVRLIL
Trigger: AAGGATCAACCGGACAGTGATTGGGATGAACCGGCAGTCTCCCCACATCGGGAGTTTTGTGGCTTGCATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR GCA 72 bp TCCTGCAGCTCAATATGGAGGGCCTCAGTAAAGCTCTaGAAGGATCCTTTCACATGCTCCCAGGCTGGCTTT +
Preference number: 3 (lower is better)
Translates to: SCSSIWRASVKL*KDPFTCSQAGF
Trigger: AAAGCCAGCCTGGGAGCATGTGAAAGGATCCTTGCAGAGCTTTACTGAGGCCCTCCATATTGAGCTGCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
3UTR-3UTR CAA 90 bp AGCAGCTGTCTAAGGCACTCGGTGTTGCAGGGAGGGCAAGATCCTTACTGGGATCTCATACGGTTCTCCTaGCTCTCATCTTGCATGATG +
Preference number: 3 (lower is better)
Translates to: SSCLRHSVLQGGQDPYWDLIRFS*LSSCMM
Trigger: CATCATGCAAGATGAGAGCAAGGAGAACCGTATGAG...ATCCCAGTAAGGATCTTGCCCTCCCTGCAACACCGAGTGCCTTAGACAGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CAA 90 bp TATGACTCTGGCTGGTTTGTGGAATTCTCAGTTTGTTCTACTTGTCTGCAGTGGGTCCCGGCAATGCTCTaGGCCTCCACTAGGCCTCCA +
Preference number: 3 (lower is better)
Translates to: YDSGWFVEFSVCSTCLQWVPAML*ASTRPP
Trigger: TGGAGGCCTAGTGGAGGCCAAGAGCATTGCCGGGAC...CCACTGCAGACAAGTAGAACAAACTGAGAATTCCACAAACCAGCCAGAGTCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
3UTR-3UTR CAA 90 bp CCCGGTCTGGAAGGAGCATTGTCAGACGAGTTTGAAGAGGTGGAAACCACAGAGCTTGTAGCCAGTGATTaGCGCTCAGAGGAGGTAATA +
Preference number: 3 (lower is better)
Translates to: PGLEGALSDEFEEVETTELVASD*RSEEVI
Trigger: TATTACCTCCTCTGAGCGCAAATCACTGGCTACAAG...CTCTGTGGTTTCCACCTCTTCAAACTCGTCTGACAATGCTCCTTCCAGACCGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CAA 90 bp AGAGAGGGACCGGTCCCAGGCATGCTGCTGAACACAGTTGCTGATCCTCTCGTTGAAGTCGATGATGTCTaGTCTGGTTTTGAAAGTGCT +
Preference number: 3 (lower is better)
Translates to: REGPVPGMLLNTVADPLVEVDDV*SGFESA
Trigger: AGCACTTTCAAAACCAGACAAGACATCATCGACTTC...AACGAGAGGATCAGCAACTGTGTTCAGCAGCATGCCTGGGACCGGTCCCTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CAA 90 bp AGAGAGGGACCGGTCCCAGGCATGCTGCTGAACACAGTTGCTGATCCTCTCGTTCTCCTTGCTCTCATCTaGCATGATGATGGTTCTATA +
Preference number: 3 (lower is better)
Translates to: REGPVPGMLLNTVADPLVLLALI*HDDGSI
Trigger: TATAGAACCATCATCATGCAAGATGAGAGCAAGGAG...AACGAGAGGATCAGCAACTGTGTTCAGCAGCATGCCTGGGACCGGTCCCTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR TCA 72 bp TTGTGGGAGAGACCACCAGCAAGTTTCCCCCAGTGCTaGCCTCTGCCTTCACAGTCAAAAAGCTTTCTGCTT +
Preference number: 3 (lower is better)
Translates to: LWERPPASFPQC*PLPSQSKSFLL
Trigger: AAGCAGAAAGCTTTTTGACTGTGAAGGCAGAGGTCAGCACTGGGGGAAACTTGCTGGTGGTCTCTCCCACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR GCA 72 bp GGTTGGGCTCATCAAATCGGGTTCTGGTGCTTTCTCTaGAATGACCTGGGACTTGCTCAGACTCCAGTCTTT +
Preference number: 3 (lower is better)
Translates to: GWAHQIGFWCFL*NDLGLAQTPVF
Trigger: AAAGACTGGAGTCTGAGCAAGTCCCAGGTCATTGCAGAGAAAGCACCAGAACCCGATTTGATGAGCCCAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR CCA 72 bp AAAGTGGCTCCAAGATTGAGCCATCAGATCCCGGTCTaGAAGGAGCATTGTCAGACGAGTTTGAAGAGGTGG +
Preference number: 3 (lower is better)
Translates to: KVAPRLSHQIPV*KEHCQTSLKRW
Trigger: CCACCTCTTCAAACTCGTCTGACAATGCTCCTTCCAGACCGGGATCTGATGGCTCAATCTTGGAGCCACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CAA 90 bp GGTTTTGGGCTGGTAAACATCATCCCAGATCAGGAAATGCAGTCAGCAGGGAGCAAAGGAAACCACCATTaGGAGAAGGGCTGTATGTGC +
Preference number: 3 (lower is better)
Translates to: GFGLVNIIPDQEMQSAGSKGNHH*EKGCMC
Trigger: GCACATACAGCCCTTCTCCAAATGGTGGTTTCCTTT...GCTCCCTGCTGACTGCATTTCCTGATCTGGGATGATGTTTACCAGCCCAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR CAA 90 bp AGCAGCTGTCTAAGGCACTCGGTGTTGCAGGGAGGGCAAGATCCTTACTGGGATGTGCTCTCTACTATCTaGGTCATGCAGTTAAGTTTC +
Preference number: 3 (lower is better)
Translates to: SSCLRHSVLQGGQDPYWDVLSTI*VMQLSF
Trigger: GAAACTTAACTGCATGACCAAGATAGTAGAGAGCAC...ATCCCAGTAAGGATCTTGCCCTCCCTGCAACACCGAGTGCCTTAGACAGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR TCA 72 bp GGCTTGTGCAGACCACCATGTCTCTGCCGTACAGGCTaGCATTTAACAATGGTGAAGGCAATCTCTTCTTGG +
Preference number: 3 (lower is better)
Translates to: GLCRPPCLCRTG*HLTMVKAISSW
Trigger: CCAAGAAGAGATTGCCTTCACCATTGTTAAATGTCAGCCTGTACGGCAGAGACATGGTGGTCTGCACAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
3UTR TCA 72 bp GGCTCATCAAATCGGGTTCTGGTGCTTTCTCTGCAATaGCCTGGGACTTGCTCAGACTCCAGTCTTTTCTCT +
Preference number: 3 (lower is better)
Translates to: GSSNRVLVLSLQ*PGTCSDSSLFS
Trigger: AGAGAAAAGACTGGAGTCTGAGCAAGTCCCAGGTCATTGCAGAGAAAGCACCAGAACCCGATTTGATGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR GCA 72 bp TGCTTTTCTGGTTGGGCTCATCAAATCGGGTTCTGGTaGTTTCTCTGCAATGACCTGGGACTTGCTCAGACT +
Preference number: 3 (lower is better)
Translates to: CFSGWAHQIGFW*FLCNDLGLAQT
Trigger: AGTCTGAGCAAGTCCCAGGTCATTGCAGAGAAAGCACCAGAACCCGATTTGATGAGCCCAACCAGAAAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR CCA 72 bp TTGTGCTTTTCTGGTTGGGCTCATCAAATCGGGTTCTaGTGCTTTCTCTGCAATGACCTGGGACTTGCTCAG +
Preference number: 3 (lower is better)
Translates to: LCFSGWAHQIGF*CFLCNDLGLAQ
Trigger: CTGAGCAAGTCCCAGGTCATTGCAGAGAAAGCACCAGAACCCGATTTGATGAGCCCAACCAGAAAAGCACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CAA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTAGAACTTGTCCAGGCTaGTGCAGACCACCATGTCTC +
Preference number: 3 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPRTCPG*CRPPCL
Trigger: GAGACATGGTGGTCTGCACAAGCCTGGACAAGTTCT...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
3UTR-3UTR CAA 90 bp ATTTGCTGCAGCAGGGCAATCATGCAAGCCACAAAACTCCCGATGTGGGGAGACGTAGAGCACTCGGGATaGGATGATGAATCTAAACAA +
Preference number: 3 (lower is better)
Translates to: ICCSRAIMQATKLPMWGDVEHSG*DDESKQ
Trigger: TTGTTTAGATTCATCATCCAATCCCGAGTGCTCTAC...GTCTCCCCACATCGGGAGTTTTGTGGCTTGCATGATTGCCCTGCTGCAGCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CAA 90 bp CCATCTCTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAACACTGCATGTACTGCTaGGGGGACGACTTGATGTCT +
Preference number: 3 (lower is better)
Translates to: PSLPRCNMGWDQCVHVRKHCMYC*GDDLMS
Trigger: AGACATCAAGTCGTCCCCCAAGCAGTACATGCAGTG...TTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAGAGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CAA 90 bp GGGTGGGTCAGCCCTTCACTCTCTCATCTCCTAAACCCTCGCTACAGACAGTGTTCCTATCTGACAATCTaGCAGCTTAGAATCTTTCCT +
Preference number: 3 (lower is better)
Translates to: GWVSPSLSHLLNPRYRQCSYLTI*QLRIFP
Trigger: AGGAAAGATTCTAAGCTGCAAGATTGTCAGATAGGA...ACACTGTCTGTAGCGAGGGTTTAGGAGATGAGAGAGTGAAGGGCTGACCCACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
3UTR GCA 72 bp TCAGGAGGTTGCCAAGGCCCTCGTAGTCAAATACTTTaGTTTCGTAAGTCTCAGCCAACTCTTTGCTCAGCT +
Preference number: 3 (lower is better)
Translates to: SGGCQGPRSQIL*FRKSQPTLCSA
Trigger: AGCTGAGCAAAGAGTTGGCTGAGACTTACGAAAGCAAAGTATTTGACTACGAGGGCCTTGGCAACCTCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR GCA 72 bp CCGATTATCCATCAACTGGAGACTCTTTGGCCTTTGTaGTTTTCTGGTTGGGCTCATCAAATCGGGTTCTGG +
Preference number: 3 (lower is better)
Translates to: PIIHQLETLWPL*FSGWAHQIGFW
Trigger: CCAGAACCCGATTTGATGAGCCCAACCAGAAAAGCACAAAGGCCAAAGAGTCTCCAGTTGATGGATAATCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR CCA 72 bp GTATGGCAGGGTCAAAGCACCACCTGGGATGATAAATaGGACAAGTATAGTCCATGGACCTCAAAGCCTTTG +
Preference number: 3 (lower is better)
Translates to: VWQGQSTTWDDK*DKYSPWTSKPL
Trigger: CAAAGGCTTTGAGGTCCATGGACTATACTTGTCCCATTTATCATCCCAGGTGGTGCTTTGACCCTGCCATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR CCA 72 bp TTAATAGCCAGGGTATGGCAGGGTCAAAGCACCACCTaGGATGATAAATGGGACAAGTATAGTCCATGGACC +
Preference number: 3 (lower is better)
Translates to: LIARVWQGQSTT*DDKWDKYSPWT
Trigger: GGTCCATGGACTATACTTGTCCCATTTATCATCCCAGGTGGTGCTTTGACCCTGCCATACCCTGGCTATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR CAA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTTACCTGGAATCCCTTTaGTTCAGGCAGGAGAGAGCT +
Preference number: 3 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPYLESL*FRQERA
Trigger: AGCTCTCTCCTGCCTGAACAAAAGGGATTCCAGGTA...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR CAA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTTCGTGGTCAGGCTTGTaGGAGTTGTCATCTAACTGG +
Preference number: 3 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPSWSGL*ELSSNW
Trigger: CCAGTTAGATGACAACTCCAACAAGCCTGACCACGA...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CAA 90 bp CAACTGCCAAATGGAAGTAATTGTTCCAGAGCTGAAGTTCAAAGCTTGCCTGATGTGGCTGTCGTCCATTaGCTGCAGCAGGGCAATCAT +
Preference number: 3 (lower is better)
Translates to: QLPNGSNCSRAEVQSLPDVAVVH*LQQGNH
Trigger: ATGATTGCCCTGCTGCAGCAAATGGACGACAGCCAC...ATCAGGCAAGCTTTGAACTTCAGCTCTGGAACAATTACTTCCATTTGGCAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CAA 90 bp GCTTGTCAGACCACTGCAGAAGCTCAGCGTGCAAGAGAAGCGTGTAGGCAGCTTTTTTTAACAATTTTGTaGCGCTTGGCTTGTGAGAAG +
Preference number: 3 (lower is better)
Translates to: ACQTTAEAQRAREACRQLFLTIL*RLACEK
Trigger: CTTCTCACAAGCCAAGCGCAACAAAATTGTTAAAAA...AAGCTGCCTACACGCTTCTCTTGCACGCTGAGCTTCTGCAGTGGTCTGACAAGC
48% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CAA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTTTCCTCTCCGTCAAGTaGGGTGGCAGTGTTATAACC +
Preference number: 3 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPFLSVK*GGSVIT
Trigger: GGTTATAACACTGCCACCCAACTTGACGGAGAGGAA...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CAA 90 bp CCACACCCCTTCCAGAATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACAAGTAGATTACAGGGGTaGCTCCACCATCAATATGGA +
Preference number: 3 (lower is better)
Translates to: PHPFQNLHTHFLSNALDTSRLQG*LHHQYG
Trigger: TCCATATTGATGGTGGAGCAACCCCTGTAATCTACT...TGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATTCTGGAAGGGGTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR CAA 90 bp GGTTTTGGGCTGGTAAACATCATCCCAGATCAGGAAATGCAGTCAGCAGGGAGCTTCTACATTAGGAAATaGCAGTGTGGCTGCAGTTTT +
Preference number: 3 (lower is better)
Translates to: GFGLVNIIPDQEMQSAGSFYIRK*QCGCSF
Trigger: AAAACTGCAGCCACACTGCAATTTCCTAATGTAGAA...GCTCCCTGCTGACTGCATTTCCTGATCTGGGATGATGTTTACCAGCCCAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR CAA 90 bp CAACTGCCAAATGGAAGTAATTGTTCCAGAGCTGAAGTTCAAAGCTTGCCTGATTCAGGCTTGTTGGAGTaGTCATCTAACTGGCCGCTG +
Preference number: 3 (lower is better)
Translates to: QLPNGSNCSRAEVQSLPDSGLLE*SSNWPL
Trigger: CAGCGGCCAGTTAGATGACAACTCCAACAAGCCTGA...ATCAGGCAAGCTTTGAACTTCAGCTCTGGAACAATTACTTCCATTTGGCAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CAA 90 bp CCCGGTCTGGAAGGAGCATTGTCAGACGAGTTTGAAGAGGTGGAAACCACAGAGCTTCTCTTTAAGCTCTaGCTGGGTATAAACATAGTA +
Preference number: 3 (lower is better)
Translates to: PGLEGALSDEFEEVETTELLFKL*LGINIV
Trigger: TACTATGTTTATACCCAGCAAGAGCTTAAAGAGAAG...CTCTGTGGTTTCCACCTCTTCAAACTCGTCTGACAATGCTCCTTCCAGACCGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CAA 90 bp CCATCTCTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAATCAACTGGAGACTCTTaGGCCTTTGTGCTTTTCTGG +
Preference number: 3 (lower is better)
Translates to: PSLPRCNMGWDQCVHVRKSTGDS*AFVLFW
Trigger: CCAGAAAAGCACAAAGGCCAAAGAGTCTCCAGTTGA...TTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAGAGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR TCA 72 bp AGTTTCTGCCGAACCAGCTGGTTGTCAGGAATGCTTTaGATGAATTTGCAGAAGAGCACGCTGAGCTCAACA +
Preference number: 3 (lower is better)
Translates to: SFCRTSWLSGML*MNLQKSTLSST
Trigger: TGTTGAGCTCAGCGTGCTCTTCTGCAAATTCATTCAAAGCATTCCTGACAACCAGCTGGTTCGGCAGAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR GCA 72 bp ATTTTGGCATTGCTGACACAAGGACGGCACCCTCTCTaGATTCCAGAGCAGACAGATATGTGCCCTTTTATA +
Preference number: 3 (lower is better)
Translates to: ILALLTQGRHPL*IPEQTDMCPFI
Trigger: TATAAAAGGGCACATATCTGTCTGCTCTGGAATGCAGAGAGGGTGCCGTCCTTGTGTCAGCAATGCCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481100.5
3UTR-3UTR CAA 90 bp TCTCAAAGCCTGCTTTATATCTTGTTCTACATTAGGAAATTGCAGTGTGGCTGCAGAACTTGTCCAGGCTaGTGCAGACCACCATGTCTC +
Preference number: 3 (lower is better)
Translates to: SQSLLYILFYIRKLQCGCRTCPG*CRPPCL
Trigger: GAGACATGGTGGTCTGCACAAGCCTGGACAAGTTCT...GCAGCCACACTGCAATTTCCTAATGTAGAACAAGATATAAAGCAGGCTTTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR CAA 90 bp CCACACCCCTTCCAGAATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACAGCTACCAAAGTGTACTaGATATCCATCTCTTCCAAG +
Preference number: 3 (lower is better)
Translates to: PHPFQNLHTHFLSNALDTATKVY*ISISSK
Trigger: CTTGGAAGAGATGGATATCAAGTACACTTTGGTAGC...TGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATTCTGGAAGGGGTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR CAA 90 bp GGTTTTGGGCTGGTAAACATCATCCCAGATCAGGAAATGCAGTCAGCAGGGAGCTCTGTTGAAATCTGTTaGACTTCAAACCACTTGAGA +
Preference number: 3 (lower is better)
Translates to: GFGLVNIIPDQEMQSAGSSVEIC*TSNHLR
Trigger: TCTCAAGTGGTTTGAAGTCAAACAGATTTCAACAGA...GCTCCCTGCTGACTGCATTTCCTGATCTGGGATGATGTTTACCAGCCCAAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR TCA 72 bp ATTTTGTTGCGCTTGGCTTGTGAGAAGGTTTCAAGCTaGAGGGACTCATGGGTGAGAAATGCAACTGCCAAA +
Preference number: 3 (lower is better)
Translates to: ILLRLACEKVSS*RDSWVRNATAK
Trigger: TTTGGCAGTTGCATTTCTCACCCATGAGTCCCTTCAGCTTGAAACCTTCTCACAAGCCAAGCGCAACAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR TCA 72 bp AGCCCTATGCTAGCCCACGTGATTCCGTGTCATCCATaGTGCCTGTTTCATGCAATAGACTGCACATATATT +
Preference number: 3 (lower is better)
Translates to: SPMLAHVIPCHP*CLFHAIDCTYI
Trigger: AATATATGTGCAGTCTATTGCATGAAACAGGCATCATGGATGACACGGAATCACGTGGGCTAGCATAGGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
3UTR GCA 72 bp GAAGGTTTCAAGCTGAAGGGACTCATGGGTGAGAAATaGAACTGCCAAATGGAAGTAATTGTTCCAGAGCTG +
Preference number: 3 (lower is better)
Translates to: EGFKLKGLMGEK*NCQMEVIVPEL
Trigger: CAGCTCTGGAACAATTACTTCCATTTGGCAGTTGCATTTCTCACCCATGAGTCCCTTCAGCTTGAAACCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CAA 90 bp CCACACCCCTTCCAGAATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACAGGGACATTTCAAATATaGTTCCAACCAGGGGTAAAT +
Preference number: 3 (lower is better)
Translates to: PHPFQNLHTHFLSNALDTGTFQI*FQPGVN
Trigger: ATTTACCCCTGGTTGGAACAATATTTGAAATGTCCC...TGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATTCTGGAAGGGGTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR CAA 90 bp TCTCAAAGCCTGCTTTATATCTTGTTCTACATTAGGAAATTGCAGTGTGGCTGCCTGGGGCTGTTTCCATaGAACACACTCAACCACTAC +
Preference number: 3 (lower is better)
Translates to: SQSLLYILFYIRKLQCGCLGLFP*NTLNHY
Trigger: GTAGTGGTTGAGTGTGTTCAATGGAAACAGCCCCAG...GCAGCCACACTGCAATTTCCTAATGTAGAACAAGATATAAAGCAGGCTTTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR CAA 90 bp CCATCTCTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAAAGAGCTGCGGTTTATaGGAGAAGTTAAATCACAGG +
Preference number: 3 (lower is better)
Translates to: PSLPRCNMGWDQCVHVRKKSCGL*EKLNHR
Trigger: CCTGTGATTTAACTTCTCCAATAAACCGCAGCTCTT...TTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAGAGATGG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR TCA 72 bp CAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTaGGAAAAGTACCTAAGTCTCAAGCACAGCTTTTCA +
Preference number: 3 (lower is better)
Translates to: QDAIWDGISVST*EKYLSLKHSFS
Trigger: TGAAAAGCTGTGCTTGAGACTTAGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
3UTR TCA 72 bp CTTGTGAGAAGGTTTCAAGCTGAAGGGACTCATGGGTaGGAAATGCAACTGCCAAATGGAAGTAATTGTTCC +
Preference number: 3 (lower is better)
Translates to: LVRRFQAEGTHG*EMQLPNGSNCS
Trigger: GGAACAATTACTTCCATTTGGCAGTTGCATTTCTCACCCATGAGTCCCTTCAGCTTGAAACCTTCTCACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR GCA 72 bp CTCAAAGGAAACCACCATTTGGAGAAGGGCTGTATGTaGAGAACTAACTTGCACTCACATTCCAAACTACCT +
Preference number: 3 (lower is better)
Translates to: LKGNHHLEKGCM*RTNLHSHSKLP
Trigger: AGGTAGTTTGGAATGTGAGTGCAAGTTAGTTCTGCACATACAGCCCTTCTCCAAATGGTGGTTTCCTTTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR CCA 72 bp TTCTGGAATTCCATGTGGACTGGAAGGGAGGTGGCATaGCCTCAAAATTCTATCAAAGAGAAGCTTTTGGAA +
Preference number: 3 (lower is better)
Translates to: FWNSMWTGREVA*PQNSIKEKLLE
Trigger: TTCCAAAAGCTTCTCTTTGATAGAATTTTGAGGCCATGCCACCTCCCTTCCAGTCCACATGGAATTCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
3UTR CCA 72 bp TTCACAAAATGGCACCATGGGCATGTGGGAACTTTCTaGGGTGCTGAAAACAGTGTATGTCTCTATCTTAGA +
Preference number: 3 (lower is better)
Translates to: FTKWHHGHVGTF*GAENSVCLYLR
Trigger: TCTAAGATAGAGACATACACTGTTTTCAGCACCCCAGAAAGTTCCCACATGCCCATGGTGCCATTTTGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR CAA 90 bp CAACTGCCAAATGGAAGTAATTGTTCCAGAGCTGAAGTTCAAAGCTTGCCTGATAGTAGATTACAGGGGTaGCTCCACCATCAATATGGA +
Preference number: 3 (lower is better)
Translates to: QLPNGSNCSRAEVQSLPDSRLQG*LHHQYG
Trigger: TCCATATTGATGGTGGAGCAACCCCTGTAATCTACT...ATCAGGCAAGCTTTGAACTTCAGCTCTGGAACAATTACTTCCATTTGGCAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR-3UTR CAA 90 bp TCTCAAAGCCTGCTTTATATCTTGTTCTACATTAGGAAATTGCAGTGTGGCTGCCTTGTAGCCAGTGATTaGCGCTCAGAGGAGGTAATA +
Preference number: 3 (lower is better)
Translates to: SQSLLYILFYIRKLQCGCLVASD*RSEEVI
Trigger: TATTACCTCCTCTGAGCGCAAATCACTGGCTACAAG...GCAGCCACACTGCAATTTCCTAATGTAGAACAAGATATAAAGCAGGCTTTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR CAA 90 bp ATGGGCATGTGGGAACTTTCTGGGGTGCTGAAAACAGTGTATGTCTCTATCTTAGTAAACAAAGGTAGGTaGTTGTCTCAAAGCCTGCTT +
Preference number: 3 (lower is better)
Translates to: MGMWELSGVLKTVYVSILVNKGR*LSQSLL
Trigger: AAGCAGGCTTTGAGACAACAACCTACCTTTGTTTAC...TAAGATAGAGACATACACTGTTTTCAGCACCCCAGAAAGTTCCCACATGCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR CAA 90 bp CCATCTCTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAATCGTAGCAAATTCATaGTCTGGATCCTTTTCTCCT +
Preference number: 3 (lower is better)
Translates to: PSLPRCNMGWDQCVHVRKIVANS*SGSFSP
Trigger: AGGAGAAAAGGATCCAGACAATGAATTTGCTACGAT...TTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAGAGATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR TCA 72 bp CACACTCAACCACTACATCCCAAGGGGCTAGTACCATaGCTGGCATTCCATAAGAACTTGATATATGTTGAA +
Preference number: 3 (lower is better)
Translates to: HTQPLHPKGLVP*LAFHKNLIYVE
Trigger: TTCAACATATATCAAGTTCTTATGGAATGCCAGTCATGGTACTAGCCCCTTGGGATGTAGTGGTTGAGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR CCA 72 bp ATGTCCACAAATCTTTTTATCTTAATAGCCAGGGTATaGCAGGGTCAAAGCACCACCTGGGATGATAAATGG +
Preference number: 3 (lower is better)
Translates to: MSTNLFILIARV*QGQSTTWDDKW
Trigger: CCATTTATCATCCCAGGTGGTGCTTTGACCCTGCCATACCCTGGCTATTAAGATAAAAAGATTTGTGGACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR CAA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTTCCTTTCTCTACAGCTaGAGTTCTCTCCATTTAAAA +
Preference number: 3 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPSFLYS*SSLHLK
Trigger: TTTTAAATGGAGAGAACTCAAGCTGTAGAGAAAGGA...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR CAA 90 bp AAAAGAGAGAAATTGAAGATGACTATGAGGTTGCCTGAGCAACTAAATGGATGGACCGCCTTGTTCAGTTaGAGCTGCATATTGGCCAAT +
Preference number: 3 (lower is better)
Translates to: KREKLKMTMRLPEQLNGWTALFS*SCILAN
Trigger: ATTGGCCAATATGCAGCTCAAACTGAACAAGGCGGT...CCATCCATTTAGTTGCTCAGGCAACCTCATAGTCATCTTCAATTTCTCTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
3UTR TCA 72 bp TGCAAGACTTATATGCAGAAAACTTTCACACGCCATTaGAGGGCACAAAAGCAGACTCGAACAAATGGAAAG +
Preference number: 3 (lower is better)
Translates to: CKTYMQKTFTRH*RAQKQTRTNGK
Trigger: CTTTCCATTTGTTCGAGTCTGCTTTTGTGCCCTTCAATGGCGTGTGAAAGTTTTCTGCATATAAGTCTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
3UTR CCA 72 bp ATCAAAGAGAAGCTTTTGGAAGAACATGACTGGTTTTaGGCTGGTAAACATCATCCCAGATCAGGAAATGCA +
Preference number: 3 (lower is better)
Translates to: IKEKLLEEHDWF*AGKHHPRSGNA
Trigger: TGCATTTCCTGATCTGGGATGATGTTTACCAGCCCAAAACCAGTCATGTTCTTCCAAAAGCTTCTCTTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
3UTR CCA 72 bp AAAACAGTGTATGTCTCTATCTTAGAGGCACGGATGTaGGCAAATAGCTATGTGAAAATTACCCATCTGCAC +
Preference number: 3 (lower is better)
Translates to: KTVYVSILEARM*ANSYVKITHLH
Trigger: GTGCAGATGGGTAATTTTCACATAGCTATTTGCCCACATCCGTGCCTCTAAGATAGAGACATACACTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR CAA 90 bp TTCAGGCAGGAGAGAGCTATTATTTCCATTAAGGTGGAAAGGGAATCATACGGACCATATTTCATCTCATaGAAACCTCACAACAACCGA +
Preference number: 3 (lower is better)
Translates to: FRQERAIISIKVERESYGPYFIS*KPHNNR
Trigger: TCGGTTGTTGTGAGGTTTCAATGAGATGAAATATGG...TCCGTATGATTCCCTTTCCACCTTAATGGAAATAATAGCTCTCTCCTGCCTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR-3UTR CAA 90 bp TATGACTCTGGCTGGTTTGTGGAATTCTCAGTTTGTTCTACTTGTCTGCAGTGGCCAACATCAAGGACTTaGAATAAAGTCTTCTGTTCA +
Preference number: 3 (lower is better)
Translates to: YDSGWFVEFSVCSTCLQWPTSRT*NKVFCS
Trigger: TGAACAGAAGACTTTATTCAAAGTCCTTGATGTTGG...CCACTGCAGACAAGTAGAACAAACTGAGAATTCCACAAACCAGCCAGAGTCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
3UTR TCA 72 bp TTGCAGTCATCCTCTGACTTCAGGACACATTATTTATaGATTCTGTCAAATGTGACTCTTCCTACCCAACAC +
Preference number: 3 (lower is better)
Translates to: LQSSSDFRTHYL*ILSNVTLPTQH
Trigger: GTGTTGGGTAGGAAGAGTCACATTTGACAGAATTCATAAATAATGTGTCCTGAAGTCAGAGGATGACTGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR TCA 72 bp CCTACTTCAATGCACATCTTCCTAACTGTCCATGTTTaGAATCCAGATAGCAACAAAATCATGGCAAAGGCA +
Preference number: 3 (lower is better)
Translates to: PTSMHIFLTVHV*NPDSNKIMAKA
Trigger: TGCCTTTGCCATGATTTTGTTGCTATCTGGATTTCAAACATGGACAGTTAGGAAGATGTGCATTGAAGTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR TCA 72 bp TTACCCTCTTCAATGGGAGTCCAACATCAAGGACTTTaGATAAAGTCTTCTGTTCAGCTCCTATCTGACAAT +
Preference number: 3 (lower is better)
Translates to: LPSSMGVQHQGL*IKSSVQLLSDN
Trigger: ATTGTCAGATAGGAGCTGAACAGAAGACTTTATTCAAAGTCCTTGATGTTGGACTCCCATTGAAGAGGGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
3UTR CCA 72 bp AATTCTATCAAAGAGAAGCTTTTGGAAGAACATGACTaGTTTTGGGCTGGTAAACATCATCCCAGATCAGGA +
Preference number: 3 (lower is better)
Translates to: NSIKEKLLEEHD*FWAGKHHPRSG
Trigger: TCCTGATCTGGGATGATGTTTACCAGCCCAAAACCAGTCATGTTCTTCCAAAAGCTTCTCTTTGATAGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
3UTR CCA 72 bp AGTTTCCCAAATGAAAAGACCTACAGTTACAGACACTaGGGATTTCTTTCTGATCATACAATGGCGAAATCC +
Preference number: 3 (lower is better)
Translates to: SFPNEKTYSYRH*GFLSDHTMAKS
Trigger: GGATTTCGCCATTGTATGATCAGAAAGAAATCCCCAGTGTCTGTAACTGTAGGTCTTTTCATTTGGGAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
3UTR-3UTR CAA 90 bp CCTGTTACCGCCTTGTTCAGTTTGAGCTGCATATTGGCCAATCAAAGTTTATATGACATTTTCCCATACTaGATCTACAAATTAGCTGTG +
Preference number: 3 (lower is better)
Translates to: PVTALFSLSCILANQSLYDIFPY*IYKLAV
Trigger: CACAGCTAATTTGTAGATCAAGTATGGGAAAATGTC...ATATAAACTTTGATTGGCCAATATGCAGCTCAAACTGAACAAGGCGGTAACAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
3UTR GCA 72 bp AAAGCCTGCTTTATATCTTGTTCTACATTAGGAAATTaGAGTGTGGCTGCAGTTTTTAATGGATTTCCTTGG +
Preference number: 3 (lower is better)
Translates to: KACFISCSTLGN*SVAAVFNGFPW
Trigger: CCAAGGAAATCCATTAAAAACTGCAGCCACACTGCAATTTCCTAATGTAGAACAAGATATAAAGCAGGCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR GCA 72 bp AAGATTTTATTAGCGACCATCATATCCTACAAGAGCTaGGGTTTATTGGAGAAGTTAAATCACAGGCATAAA +
Preference number: 3 (lower is better)
Translates to: KILLATIISYKS*GLLEKLNHRHK
Trigger: TTTATGCCTGTGATTTAACTTCTCCAATAAACCGCAGCTCTTGTAGGATATGATGGTCGCTAATAAAATCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR CAA 72 bp GACTTCCGAGCCTTTGGAGGTGGAGGGGGTGGTGCTTaGGCTTCTCTTCGGACAGGCAGTGGGGGAGCGAGC +
Preference number: 4 (lower is better)
Translates to: DFRAFGGGGGGA*ASLRTGSGGAS
Trigger: GCTCGCTCCCCCACTGCCTGTCCGAAGAGAAGCCAAAGCACCACCCCCTCCACCTCCAAAGGCTCGGAAGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR TCA 90 bp TTCTCTTCGGACAGGCAGTGGGGGAGCGAGCTCAGTGGAGTTCCTCTGGCTGCCCACAGAGGAAGTGACTaGGGTGATGGACAACCTCCG +
Preference number: 4 (lower is better)
Translates to: FSSDRQWGSELSGVPLAAHRGSD*GDGQPP
Trigger: CGGAGGTTGTCCATCACCTCAGTCACTTCCTCTGTG...GGCAGCCAGAGGAACTCCACTGAGCTCGCTCCCCCACTGCCTGTCCGAAGAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CCA 90 bp TGGAGGGCCTCAGTAAAGCTCTGCAAGGATCCTTTCACATGCTCCCAGGCTGGCCCCACGCGGACAATCTaGCACACAAGGCTGACGCGG +
Preference number: 4 (lower is better)
Translates to: WRASVKLCKDPFTCSQAGPTRTI*HTRLTR
Trigger: CCGCGTCAGCCTTGTGTGCCAGATTGTCCGCGTGGG...GCCAGCCTGGGAGCATGTGAAAGGATCCTTGCAGAGCTTTACTGAGGCCCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481100.5
3UTR CAA 72 bp GTCTGCAACGATGGGGAGCTTAGGGTCCTGGTGGCTTaGGGAGTGAGTGGAGGTGGGCTCAAGGGTGTTGAC +
Preference number: 4 (lower is better)
Translates to: VCNDGELRVLVA*GVSGGGLKGVD
Trigger: GTCAACACCCTTGAGCCCACCTCCACTCACTCCCAAAGCCACCAGGACCCTAAGCTCCCCATCGTTGCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR TCA 90 bp AGTTCCCGGAAGCAAGAAGACAACCGCTCATGCAGCGGCTTCAGCTGCTCTGTGTTCAACTCTGGCACCTaGCGAGGCCCTGCGCTCCAA +
Preference number: 4 (lower is better)
Translates to: SSRKQEDNRSCSGFSCSVFNSGT*RGPALQ
Trigger: TTGGAGCGCAGGGCCTCGTCAGGTGCCAGAGTTGAA...CACAGAGCAGCTGAAGCCGCTGCATGAGCGGTTGTCTTCTTGCTTCCGGGAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CCA 90 bp TGGAGGGCCTCAGTAAAGCTCTGCAAGGATCCTTTCACATGCTCCCAGGCTGGCTCCCGGCAATGCTCTTaGCCTCCACTAGGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: WRASVKLCKDPFTCSQAGSRQCS*PPLGLH
Trigger: GTGGAGGCCTAGTGGAGGCCAAGAGCATTGCCGGGA...GCCAGCCTGGGAGCATGTGAAAGGATCCTTGCAGAGCTTTACTGAGGCCCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR TCA 90 bp ATATGGAGGGCCTCAGTAAAGCTCTGCAAGGATCCTTTCACATGCTCCCAGGCTCTCGCAGAGTGGACGTaGGCTCCTGCACCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: IWRASVKLCKDPFTCSQALAEWT*APAPGG
Trigger: TCCCCCTGGTGCAGGAGCTCACGTCCACTCTGCGAG...AGCCTGGGAGCATGTGAAAGGATCCTTGCAGAGCTTTACTGAGGCCCTCCATAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR TCA 90 bp CCTGTGCAGGTGCTGGAGCAGGTCATGACGTTCACACCTGCACTTCTTCAGAGTCCACCTCATGGGCCTTaGAGAGGGCAATGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: PVQVLEQVMTFTPALLQSPPHGP*RGQWCW
Trigger: CCAGCACCATTGCCCTCTTCAAGGCCCATGAGGTGG...ACTCTGAAGAAGTGCAGGTGTGAACGTCATGACCTGCTCCAGCACCTGCACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR TCA 90 bp CTGCTGACCAGGAGGGCGAAGACCTCCCCAGAGCTGGAGAGGTATTTGTGTTTCTCTCTAAGAGGCTGCTaGCCAGGAGGGCGAAGACCT +
Preference number: 4 (lower is better)
Translates to: LLTRRAKTSPELERYLCFSLRGC*PGGRRP
Trigger: AGGTCTTCGCCCTCCTGGTCAGCAGCCTCTTAGAGA...GAAACACAAATACCTCTCCAGCTCTGGGGAGGTCTTCGCCCTCCTGGTCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR GCA 90 bp GGCTGGTTTGTGGAATTCTCAGTTTGTTCTACTTGTCTGCAGTGGCAGCTGCAACCCCGCGCTCCTGCGTaGCCCAGACGCTTCCGCCAT +
Preference number: 4 (lower is better)
Translates to: GWFVEFSVCSTCLQWQLQPRAPA*PRRFRH
Trigger: ATGGCGGAAGCGTCTGGGGCACGCAGGAGCGCGGGG...TTGCAGCTGCCACTGCAGACAAGTAGAACAAACTGAGAATTCCACAAACCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR GCA 90 bp ATATGGAGGGCCTCAGTAAAGCTCTGCAAGGATCCTTTCACATGCTCCCAGGCTGTGGACGTGAGCTCCTaGACCAGGGGGAGCTCGCCA +
Preference number: 4 (lower is better)
Translates to: IWRASVKLCKDPFTCSQAVDVSS*TRGSSP
Trigger: TGGCGAGCTCCCCCTGGTGCAGGAGCTCACGTCCAC...AGCCTGGGAGCATGTGAAAGGATCCTTGCAGAGCTTTACTGAGGCCCTCCATAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR GCA 90 bp CTCGGTGTTGCAGGGAGGGCAAGATCCTTACTGGGATCCAGGCTCGGAAGTAGGGCACCTCCAGGATGTTaGTCAGAAGCTGCGAGCTTG +
Preference number: 4 (lower is better)
Translates to: LGVAGRARSLLGSRLGSRAPPGC*SEAASL
Trigger: CAAGCTCGCAGCTTCTGAGCAACATCCTGGAGGTGC...CCTACTTCCGAGCCTGGATCCCAGTAAGGATCTTGCCCTCCCTGCAACACCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR GCA 90 bp TTCTCTTCGGACAGGCAGTGGGGGAGCGAGCTCAGTGGAGTTCCTCTGGCTGCCTCAGCACGTTCACAGTaGAGCTCATACGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: FSSDRQWGSELSGVPLAASARSQ*SSYGSP
Trigger: AGGAGAACCGTATGAGCTGCACTGTGAACGTGCTGA...GGCAGCCAGAGGAACTCCACTGAGCTCGCTCCCCCACTGCCTGTCCGAAGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CCA 90 bp GTGGGTCAGCCCTTCACTCTCTCATCTCCTAAACCCTCGCTACAGACAGTGTGGGTCCCAGACAGGATCTaGGACCGCCACTCGATCAGG +
Preference number: 4 (lower is better)
Translates to: VGQPFTLSSPKPSLQTVWVPDRI*DRHSIR
Trigger: CCTGATCGAGTGGCGGTCCCAGATCCTGTCTGGGAC...CCACACTGTCTGTAGCGAGGGTTTAGGAGATGAGAGAGTGAAGGGCTGACCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR CCA 90 bp CTGCTGACCAGGAGGGCGAAGACCTCCCCAGAGCTGGAGAGGTATTTGTGTTTCCTTCCCCAGGAGGCGTaGTACTGGTCATCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: LLTRRAKTSPELERYLCFLPQEA*YWSSSP
Trigger: CGGAGAAGATGACCAGTACCACGCCTCCTGGGGAAG...GAAACACAAATACCTCTCCAGCTCTGGGGAGGTCTTCGCCCTCCTGGTCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CCA 90 bp TGGAGGGCCTCAGTAAAGCTCTGCAAGGATCCTTTCACATGCTCCCAGGCTGGCTCAATGGCCTACCCATaGCTCCAGCTCCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: WRASVKLCKDPFTCSQAGSMAYP*LQLLQL
Trigger: GAGCTGCAGGAGCTGGAGCCATGGGTAGGCCATTGA...GCCAGCCTGGGAGCATGTGAAAGGATCCTTGCAGAGCTTTACTGAGGCCCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR CCA 90 bp GCATTGCTGACACAAGGACGGCACCCTCTCTGCATTCCAGAGCAGACAGATATGGCCCCTGGTGGGACTTaGTCCCGGCAATGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: ALLTQGRHPLCIPEQTDMAPGGT*SRQCSW
Trigger: CCAAGAGCATTGCCGGGACCAAGTCCCACCAGGGGC...CATATCTGTCTGCTCTGGAATGCAGAGAGGGTGCCGTCCTTGTGTCAGCAATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481100.5
3UTR CAA 72 bp CAGTTCTCAGGCAGCAGCTGTCTAAGGCACTCGGTGTaGCAGGGAGGGCAAGATCCTTACTGGGATCCAGGC +
Preference number: 4 (lower is better)
Translates to: QFSGSSCLRHSV*QGGQDPYWDPG
Trigger: GCCTGGATCCCAGTAAGGATCTTGCCCTCCCTGCAACACCGAGTGCCTTAGACAGCTGCTGCCTGAGAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR TCA 90 bp CTTGATGTCTTCCCCAGGAGGCGTGGTACTGGTCATCTTCTCCGCATTGGGGAACATCTAACTGGCCGCTaGGCTGGTCTGTCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: LDVFPRRRGTGHLLRIGEHLTGR*AGLSAV
Trigger: CACTGCTGACAGACCAGCTCAGCGGCCAGTTAGATG...TTCCCCAATGCGGAGAAGATGACCAGTACCACGCCTCCTGGGGAAGACATCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR TCA 90 bp GGGTGGGTCAGCCCTTCACTCTCTCATCTCCTAAACCCTCGCTACAGACAGTGTGCAAGTGAGCTGAGATaGTGCCCTCTGACTGGCACG +
Preference number: 4 (lower is better)
Translates to: GWVSPSLSHLLNPRYRQCASELR*CPLTGT
Trigger: CGTGCCAGTCAGAGGGCATCATCTCAGCTCACTTGC...ACACTGTCTGTAGCGAGGGTTTAGGAGATGAGAGAGTGAAGGGCTGACCCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR GCA 90 bp AATTCCATGTGGACTGGAAGGGAGGTGGCATGGCCTCAAAATTCTATCAAAGAGCCCCGCGCTCCTGCGTaGCCCAGACGCTTCCGCCAT +
Preference number: 4 (lower is better)
Translates to: NSMWTGREVAWPQNSIKEPRAPA*PRRFRH
Trigger: ATGGCGGAAGCGTCTGGGGCACGCAGGAGCGCGGGG...CTCTTTGATAGAATTTTGAGGCCATGCCACCTCCCTTCCAGTCCACATGGAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp GTGGGTCAGCCCTTCACTCTCTCATCTCCTAAACCCTCGCTACAGACAGTGTGGCTGTACGTCATCTGCTaGAGCTGGCGGAAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: VGQPFTLSSPKPSLQTVWLYVIC*SWRKRV
Trigger: CACCCTCTTCCGCCAGCTGCAGCAGATGACGTACAG...CCACACTGTCTGTAGCGAGGGTTTAGGAGATGAGAGAGTGAAGGGCTGACCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR GCA 90 bp CCTGTGCAGGTGCTGGAGCAGGTCATGACGTTCACACCTGCACTTCTTCAGAGTAGGCTGTACGTCATCTaGTGCAGCTGGCGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: PVQVLEQVMTFTPALLQSRLYVI*CSWRKR
Trigger: CCTCTTCCGCCAGCTGCAGCAGATGACGTACAGCCT...ACTCTGAAGAAGTGCAGGTGTGAACGTCATGACCTGCTCCAGCACCTGCACAGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR GCA 90 bp TCTGGGCAAGGTTGTGGGAGAGACCACCAGCAAGTTTCCCCCAGTGCTGACCTCGCAGCAGGGCAATCATaGAAGCCACAAAACTCCCGA +
Preference number: 4 (lower is better)
Translates to: SGQGCGRDHQQVSPSADLAAGQS*KPQNSR
Trigger: TCGGGAGTTTTGTGGCTTGCATGATTGCCCTGCTGC...GAGGTCAGCACTGGGGGAAACTTGCTGGTGGTCTCTCCCACAACCTTGCCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp TTCTCTTCGGACAGGCAGTGGGGGAGCGAGCTCAGTGGAGTTCCTCTGGCTGCCCAAATCGGGTTCTGGTaGTTTCTCTGCAATGACCTG +
Preference number: 4 (lower is better)
Translates to: FSSDRQWGSELSGVPLAAQIGFW*FLCNDL
Trigger: CAGGTCATTGCAGAGAAAGCACCAGAACCCGATTTG...GGCAGCCAGAGGAACTCCACTGAGCTCGCTCCCCCACTGCCTGTCCGAAGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR GCA 90 bp CTCGGTGTTGCAGGGAGGGCAAGATCCTTACTGGGATCCAGGCTCGGAAGTAGGGCGATTCCATCTGTCTaGAACGATGGGGAGCTTAGG +
Preference number: 4 (lower is better)
Translates to: LGVAGRARSLLGSRLGSRAIPSV*NDGELR
Trigger: CCTAAGCTCCCCATCGTTGCAGACAGATGGAATCGC...CCTACTTCCGAGCCTGGATCCCAGTAAGGATCTTGCCCTCCCTGCAACACCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR GCA 90 bp TGGAGGGCCTCAGTAAAGCTCTGCAAGGATCCTTTCACATGCTCCCAGGCTGGCGGACGGCACCCTCTCTaGATTCCAGAGCAGACAGAT +
Preference number: 4 (lower is better)
Translates to: WRASVKLCKDPFTCSQAGGRHPL*IPEQTD
Trigger: ATCTGTCTGCTCTGGAATGCAGAGAGGGTGCCGTCC...GCCAGCCTGGGAGCATGTGAAAGGATCCTTGCAGAGCTTTACTGAGGCCCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR CCA 90 bp GCTTGTCAGACCACTGCAGAAGCTCAGCGTGCAAGAGAAGCGTGTAGGCAGCTTGAGGTGGGACAGGAGTaGCCGCGATTCCATCTGTCT +
Preference number: 4 (lower is better)
Translates to: ACQTTAEAQRAREACRQLEVGQE*PRFHLS
Trigger: AGACAGATGGAATCGCGGCCACTCCTGTCCCACCTC...AAGCTGCCTACACGCTTCTCTTGCACGCTGAGCTTCTGCAGTGGTCTGACAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CCA 90 bp GCTTGTCAGACCACTGCAGAAGCTCAGCGTGCAAGAGAAGCGTGTAGGCAGCTTTGGAGGTGGAGGGGGTaGTGCTTTGGCTTCTCTTCG +
Preference number: 4 (lower is better)
Translates to: ACQTTAEAQRAREACRQLWRWRG*CFGFSS
Trigger: CGAAGAGAAGCCAAAGCACCACCCCCTCCACCTCCA...AAGCTGCCTACACGCTTCTCTTGCACGCTGAGCTTCTGCAGTGGTCTGACAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CCA 90 bp GGGTGGGTCAGCCCTTCACTCTCTCATCTCCTAAACCCTCGCTACAGACAGTGTAACATGCAGGAACACTaGCCCATGGGTGGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: GWVSPSLSHLLNPRYRQCNMQEH*PMGGSA
Trigger: GGCTGACCCACCCATGGGCCAGTGTTCCTGCATGTT...ACACTGTCTGTAGCGAGGGTTTAGGAGATGAGAGAGTGAAGGGCTGACCCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR CCA 90 bp CACTTCTTCAGAGTGACACGGCTTGAATCTGCTCCCAACAGCTCCTCAATGGCCATGATGCCCTCTGACTaGCACGATGGCCCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: HFFRVTRLESAPNSSSMAMMPSD*HDGPWW
Trigger: CCACCAGGGGCCATCGTGCCAGTCAGAGGGCATCAT...GGCCATTGAGGAGCTGTTGGGAGCAGATTCAAGCCGTGTCACTCTGAAGAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481100.5
3UTR CAA 72 bp CTCAGAAGCTGCGAGCTTGCCTCGTGGTCAGGCTTGTaGGAGTTGTCATCTAACTGGCCGCTGAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: LRSCELASWSGL*ELSSNWPLSWS
Trigger: AGACCAGCTCAGCGGCCAGTTAGATGACAACTCCAACAAGCCTGACCACGAGGCAAGCTCGCAGCTTCTGAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR TCA 90 bp AGAAGGTATCCAGACAGTGATGTATCCTATCTTCCCAGCCTCTGCTCAAAGACCCTCGCAGAGTGGACGTaGGCTCCTGCACCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: RRYPDSDVSYLPSLCSKTLAEWT*APAPGG
Trigger: TCCCCCTGGTGCAGGAGCTCACGTCCACTCTGCGAG...GGTCTTTGAGCAGAGGCTGGGAAGATAGGATACATCACTGTCTGGATACCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp TCTGGTTTTGAAAGTGCTGATGTAGTGGCTATAGTGGCTGTCGTCCATTTGCTGGGGAGCCCCATGGAATaGGGACACCGGCTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: SGFESADVVAIVAVVHLLGSPME*GHRLEA
Trigger: GGCCTCCAGCCGGTGTCCTCATTCCATGGGGCTCCC...CAGCAAATGGACGACAGCCACTATAGCCACTACATCAGCACTTTCAAAACCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR TCA 90 bp CTGCTGACCAGGAGGGCGAAGACCTCCCCAGAGCTGGAGAGGTATTTGTGTTTCAGCAGATGCGGCTGCTaGGTCACCCAAATGGGTTTT +
Preference number: 4 (lower is better)
Translates to: LLTRRAKTSPELERYLCFSRCGC*VTQMGF
Trigger: AAAACCCATTTGGGTGACTCAGCAGCCGCATCTGCT...GAAACACAAATACCTCTCCAGCTCTGGGGAGGTCTTCGCCCTCCTGGTCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR TCA 90 bp GGGTGGGTCAGCCCTTCACTCTCTCATCTCCTAAACCCTCGCTACAGACAGTGTAGTGGCAGCTGCAAGTaGGCTGAGATGATGCCCTCT +
Preference number: 4 (lower is better)
Translates to: GWVSPSLSHLLNPRYRQCSGSCK*AEMMPS
Trigger: AGAGGGCATCATCTCAGCTCACTTGCAGCTGCCACT...ACACTGTCTGTAGCGAGGGTTTAGGAGATGAGAGAGTGAAGGGCTGACCCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR GCA 90 bp TCTGGGCAAGGTTGTGGGAGAGACCACCAGCAAGTTTCCCCCAGTGCTGACCTCGAAGGCCACCCCAAATaGTCGCTCCGATTTATCTCT +
Preference number: 4 (lower is better)
Translates to: SGQGCGRDHQQVSPSADLEGHPK*SLRFIS
Trigger: AGAGATAAATCGGAGCGAGCATTTGGGGTGGCCTTC...GAGGTCAGCACTGGGGGAAACTTGCTGGTGGTCTCTCCCACAACCTTGCCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp CTTGATGTCTTCCCCAGGAGGCGTGGTACTGGTCATCTTCTCCGCATTGGGGAAGAAGACAACCGCTCATaGAGCGGCTTCAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LDVFPRRRGTGHLLRIGEEDNRS*SGFSCS
Trigger: AGAGCAGCTGAAGCCGCTGCATGAGCGGTTGTCTTC...TTCCCCAATGCGGAGAAGATGACCAGTACCACGCCTCCTGGGGAAGACATCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CCA 90 bp GGTTTTGGGCTGGTAAACATCATCCCAGATCAGGAAATGCAGTCAGCAGGGAGCCGTACTTCTGCCTCTTaGTCGGGATCCAGCGGGCCA +
Preference number: 4 (lower is better)
Translates to: GFGLVNIIPDQEMQSAGSRTSAS*SGSSGP
Trigger: TGGCCCGCTGGATCCCGACCAAGAGGCAGAAGTACG...GCTCCCTGCTGACTGCATTTCCTGATCTGGGATGATGTTTACCAGCCCAAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp GTGGGTCAGCCCTTCACTCTCTCATCTCCTAAACCCTCGCTACAGACAGTGTGGTCCTTCAGCTCCATATaGCCCACGCGGACAATCTGG +
Preference number: 4 (lower is better)
Translates to: VGQPFTLSSPKPSLQTVWSFSSI*PTRTIW
Trigger: CCAGATTGTCCGCGTGGGCCATATGGAGCTGAAGGA...CCACACTGTCTGTAGCGAGGGTTTAGGAGATGAGAGAGTGAAGGGCTGACCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR CCA 90 bp CTGCTGACCAGGAGGGCGAAGACCTCCCCAGAGCTGGAGAGGTATTTGTGTTTCACAAAACTCCCGATGTaGGGAGACTGCCGGTTCATC +
Preference number: 4 (lower is better)
Translates to: LLTRRAKTSPELERYLCFTKLPM*GDCRFI
Trigger: GATGAACCGGCAGTCTCCCCACATCGGGAGTTTTGT...GAAACACAAATACCTCTCCAGCTCTGGGGAGGTCTTCGCCCTCCTGGTCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CCA 90 bp GGTTTTGGGCTGGTAAACATCATCCCAGATCAGGAAATGCAGTCAGCAGGGAGCAGACTTCCGAGCCTTTaGAGGTGGAGGGGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: GFGLVNIIPDQEMQSAGSRLPSL*RWRGWC
Trigger: GCACCACCCCCTCCACCTCCAAAGGCTCGGAAGTCT...GCTCCCTGCTGACTGCATTTCCTGATCTGGGATGATGTTTACCAGCCCAAAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
3UTR CAA 72 bp ACAGTGAAGCACTGCATGTACTGCTTGGGGGACGACTaGATGTCTTCCCCAGGAGGCGTGGTACTGGTCATC +
Preference number: 4 (lower is better)
Translates to: TVKHCMYCLGDD*MSSPGGVVLVI
Trigger: GATGACCAGTACCACGCCTCCTGGGGAAGACATCAAGTCGTCCCCCAAGCAGTACATGCAGTGCTTCACTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR TCA 90 bp ATTTGCTGCAGCAGGGCAATCATGCAAGCCACAAAACTCCCGATGTGGGGAGACTCCCAGGCATGCTGCTaGACACAGTTGCTGATCCTC +
Preference number: 4 (lower is better)
Translates to: ICCSRAIMQATKLPMWGDSQACC*TQLLIL
Trigger: GAGGATCAGCAACTGTGTTCAGCAGCATGCCTGGGA...GTCTCCCCACATCGGGAGTTTTGTGGCTTGCATGATTGCCCTGCTGCAGCAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR TCA 90 bp ATTTGCTGCAGCAGGGCAATCATGCAAGCCACAAAACTCCCGATGTGGGGAGACGTGACTGCGACGCAGTaGAGGCCATTAGTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: ICCSRAIMQATKLPMWGDVTATQ*RPLVRS
Trigger: ACTCCTGACTAATGGCCTTCACTGCGTCGCAGTCAC...GTCTCCCCACATCGGGAGTTTTGTGGCTTGCATGATTGCCCTGCTGCAGCAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR TCA 90 bp TCTGGGCAAGGTTGTGGGAGAGACCACCAGCAAGTTTCCCCCAGTGCTGACCTCATGAGTTTGGACATCTaGTACTGCAGACCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: SGQGCGRDHQQVSPSADLMSLDI*YCRPAL
Trigger: CAAGGCTGGTCTGCAGTATCAGATGTCCAAACTCAT...GAGGTCAGCACTGGGGGAAACTTGCTGGTGGTCTCTCCCACAACCTTGCCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTGTGGACGTGAGCTCCTaGACCAGGGGGAGCTCGCCA +
Preference number: 4 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPVDVSS*TRGSSP
Trigger: TGGCGAGCTCCCCCTGGTGCAGGAGCTCACGTCCAC...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp TTCTCTTCGGACAGGCAGTGGGGGAGCGAGCTCAGTGGAGTTCCTCTGGCTGCCCTCATGGGTGAGAAATaGAACTGCCAAATGGAAGTA +
Preference number: 4 (lower is better)
Translates to: FSSDRQWGSELSGVPLAALMGEK*NCQMEV
Trigger: TACTTCCATTTGGCAGTTGCATTTCTCACCCATGAG...GGCAGCCAGAGGAACTCCACTGAGCTCGCTCCCCCACTGCCTGTCCGAAGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR GCA 90 bp CCGTTCCATTATAAGCTGAATGTGCACCGCAGTGGCACCCACATCCTTCCTGTCGGCTTGTCAGACCACTaGAGAAGCTCAGCGTGCAAG +
Preference number: 4 (lower is better)
Translates to: PFHYKLNVHRSGTHILPVGLSDH*RSSACK
Trigger: CTTGCACGCTGAGCTTCTGCAGTGGTCTGACAAGCC...GACAGGAAGGATGTGGGTGCCACTGCGGTGCACATTCAGCTTATAATGGAACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR GCA 90 bp AGTTCCCGGAAGCAAGAAGACAACCGCTCATGCAGCGGCTTCAGCTGCTCTGTGCCCAGGAAAGGTATATaGAGTCGTATACGTGGTCCG +
Preference number: 4 (lower is better)
Translates to: SSRKQEDNRSCSGFSCSVPRKGI*SRIRGP
Trigger: CGGACCACGTATACGACTGCATATACCTTTCCTGGG...CACAGAGCAGCTGAAGCCGCTGCATGAGCGGTTGTCTTCTTGCTTCCGGGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR GCA 90 bp TTCTCTTCGGACAGGCAGTGGGGGAGCGAGCTCAGTGGAGTTCCTCTGGCTGCCGTAGATTACAGGGGTTaGTCCACCATCAATATGGAA +
Preference number: 4 (lower is better)
Translates to: FSSDRQWGSELSGVPLAAVDYRG*STINME
Trigger: TTCCATATTGATGGTGGAGCAACCCCTGTAATCTAC...GGCAGCCAGAGGAACTCCACTGAGCTCGCTCCCCCACTGCCTGTCCGAAGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR GCA 90 bp CCTGTGCAGGTGCTGGAGCAGGTCATGACGTTCACACCTGCACTTCTTCAGAGTAAGGATCCTTTCACATaGTCCCAGGCTGGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: PVQVLEQVMTFTPALLQSKDPFT*SQAGFP
Trigger: GGGAAAGCCAGCCTGGGAGCATGTGAAAGGATCCTT...ACTCTGAAGAAGTGCAGGTGTGAACGTCATGACCTGCTCCAGCACCTGCACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR GCA 90 bp ATATGGAGGGCCTCAGTAAAGCTCTGCAAGGATCCTTTCACATGCTCCCAGGCTACTTGGTCCCGGCAATaGTCTTGGCCTCCACTAGGC +
Preference number: 4 (lower is better)
Translates to: IWRASVKLCKDPFTCSQATWSRQ*SWPPLG
Trigger: GCCTAGTGGAGGCCAAGAGCATTGCCGGGACCAAGT...AGCCTGGGAGCATGTGAAAGGATCCTTGCAGAGCTTTACTGAGGCCCTCCATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR CCA 90 bp TTGTCAGAGGCAGAACTCCCCTGCAGCCTAACAAGTTCCCCTGATTCATATGCACGTACTTCTGCCTCTTaGTCGGGATCCAGCGGGCCA +
Preference number: 4 (lower is better)
Translates to: LSEAELPCSLTSSPDSYARTSAS*SGSSGP
Trigger: TGGCCCGCTGGATCCCGACCAAGAGGCAGAAGTACG...TGCATATGAATCAGGGGAACTTGTTAGGCTGCAGGGGAGTTCTGCCTCTGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR CCA 90 bp CCACACCCCTTCCAGAATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACACCCACGCGGACAATCTaGCACACAAGGCTGACGCGG +
Preference number: 4 (lower is better)
Translates to: PHPFQNLHTHFLSNALDTPTRTI*HTRLTR
Trigger: CCGCGTCAGCCTTGTGTGCCAGATTGTCCGCGTGGG...TGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATTCTGGAAGGGGTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp CTGCTGACCAGGAGGGCGAAGACCTCCCCAGAGCTGGAGAGGTATTTGTGTTTCCGTGGTCAGGCTTGTTaGAGTTGTCATCTAACTGGC +
Preference number: 4 (lower is better)
Translates to: LLTRRAKTSPELERYLCFRGQAC*SCHLTG
Trigger: GCCAGTTAGATGACAACTCCAACAAGCCTGACCACG...GAAACACAAATACCTCTCCAGCTCTGGGGAGGTCTTCGCCCTCCTGGTCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CCA 90 bp CCGTTCCATTATAAGCTGAATGTGCACCGCAGTGGCACCCACATCCTTCCTGTCTGCGAGCTTGCCTCGTaGTCAGGCTTGTTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: PFHYKLNVHRSGTHILPVCELAS*SGLLEL
Trigger: CAACTCCAACAAGCCTGACCACGAGGCAAGCTCGCA...GACAGGAAGGATGTGGGTGCCACTGCGGTGCACATTCAGCTTATAATGGAACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CCA 90 bp AGTTCCCGGAAGCAAGAAGACAACCGCTCATGCAGCGGCTTCAGCTGCTCTGTGGTGAGTTTCTCCCCATaGATGCGGATCCCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: SSRKQEDNRSCSGFSCSVVSFSP*MRIPSV
Trigger: AACAGAAGGGATCCGCATCCATGGGGAGAAACTCAC...CACAGAGCAGCTGAAGCCGCTGCATGAGCGGTTGTCTTCTTGCTTCCGGGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CCA 90 bp CCCGGTCTGGAAGGAGCATTGTCAGACGAGTTTGAAGAGGTGGAAACCACAGAGACAGATCTTCAACTCTaGCACCTGACGAGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: PGLEGALSDEFEEVETTETDLQL*HLTRPC
Trigger: GCAGGGCCTCGTCAGGTGCCAGAGTTGAAGATCTGT...CTCTGTGGTTTCCACCTCTTCAAACTCGTCTGACAATGCTCCTTCCAGACCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CCA 90 bp CAGACTGGTAAGTCCCTTGTAGCCAGTGATTTGCGCTCAGAGGAGGTAATAGGATCTTCGGACAGGCAGTaGGGGAGCGAGCTCAGTGGA +
Preference number: 4 (lower is better)
Translates to: QTGKSLVASDLRSEEVIGSSDRQ*GSELSG
Trigger: TCCACTGAGCTCGCTCCCCCACTGCCTGTCCGAAGA...TCCTATTACCTCCTCTGAGCGCAAATCACTGGCTACAAGGGACTTACCAGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CCA 90 bp GGTTTTGGGCTGGTAAACATCATCCCAGATCAGGAAATGCAGTCAGCAGGGAGCGAGGGGGTGGTGCTTTaGCTTCTCTTCGGACAGGCA +
Preference number: 4 (lower is better)
Translates to: GFGLVNIIPDQEMQSAGSEGVVL*LLFGQA
Trigger: TGCCTGTCCGAAGAGAAGCCAAAGCACCACCCCCTC...GCTCCCTGCTGACTGCATTTCCTGATCTGGGATGATGTTTACCAGCCCAAAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CCA 90 bp AGCAGCTGTCTAAGGCACTCGGTGTTGCAGGGAGGGCAAGATCCTTACTGGGATGGGCAAGATCCTTACTaGGATCCAGGCTCGGAAGTA +
Preference number: 4 (lower is better)
Translates to: SSCLRHSVLQGGQDPYWDGQDPY*DPGSEV
Trigger: TACTTCCGAGCCTGGATCCCAGTAAGGATCTTGCCC...ATCCCAGTAAGGATCTTGCCCTCCCTGCAACACCGAGTGCCTTAGACAGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CCA 90 bp CTTTGTGCTTTTCTGGTTGGGCTCATCAAATCGGGTTCTGGTGCTTTCTCTGCACAGCAGGGAGCCCCATaGAATGAGGACACCGGCTGG +
Preference number: 4 (lower is better)
Translates to: LCAFLVGLIKSGSGAFSAQQGAP*NEDTGW
Trigger: CCAGCCGGTGTCCTCATTCCATGGGGCTCCCTGCTG...TGCAGAGAAAGCACCAGAACCCGATTTGATGAGCCCAACCAGAAAAGCACAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CCA 90 bp TCTGGGCAAGGTTGTGGGAGAGACCACCAGCAAGTTTCCCCCAGTGCTGACCTCGGTCAAAGCACCACCTaGGATGATAAATGGGACAAG +
Preference number: 4 (lower is better)
Translates to: SGQGCGRDHQQVSPSADLGQSTT*DDKWDK
Trigger: CTTGTCCCATTTATCATCCCAGGTGGTGCTTTGACC...GAGGTCAGCACTGGGGGAAACTTGCTGGTGGTCTCTCCCACAACCTTGCCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp AATATGGAGGGCCTCAGTAAAGCTCTGCAAGGATCCTTTCACATGCTCCCAGGCCCAACAGCTCCTCAATaGCCTACCCATGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: NMEGLSKALQGSFHMLPGPTAPQ*PTHGSS
Trigger: GCTGGAGCCATGGGTAGGCCATTGAGGAGCTGTTGG...GCCTGGGAGCATGTGAAAGGATCCTTGCAGAGCTTTACTGAGGCCCTCCATATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
3UTR CAA 72 bp CATGATGTAGGGGAGCACAATAGACCCCGTGCGGCTTaGCTTCCTCTCCGTCAAGTTGGGTGGCAGTGTTAT +
Preference number: 4 (lower is better)
Translates to: HDVGEHNRPRAA*LPLRQVGWQCY
Trigger: ATAACACTGCCACCCAACTTGACGGAGAGGAAGCAAAGCCGCACGGGGTCTATTGTGCTCCCCTACATCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR TCA 90 bp AATATGGAGGGCCTCAGTAAAGCTCTGCAAGGATCCTTTCACATGCTCCCAGGCAGAGCTTTCGCCAGATaGCAGCCCATTCTCGCAGAG +
Preference number: 4 (lower is better)
Translates to: NMEGLSKALQGSFHMLPGRAFAR*QPILAE
Trigger: CTCTGCGAGAATGGGCTGTCATCTGGCGAAAGCTCT...GCCTGGGAGCATGTGAAAGGATCCTTGCAGAGCTTTACTGAGGCCCTCCATATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR TCA 90 bp AATATGGAGGGCCTCAGTAAAGCTCTGCAAGGATCCTTTCACATGCTCCCAGGCGCTGGCGGAAGAGGGTaGGCTTGTTGTTCACGTAGA +
Preference number: 4 (lower is better)
Translates to: NMEGLSKALQGSFHMLPGAGGRG*ACCSRR
Trigger: TCTACGTGAACAACAAGCTCACCCTCTTCCGCCAGC...GCCTGGGAGCATGTGAAAGGATCCTTGCAGAGCTTTACTGAGGCCCTCCATATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR TCA 90 bp TCTGGGCAAGGTTGTGGGAGAGACCACCAGCAAGTTTCCCCCAGTGCTGACCTCGAGGTTCTGCAGGATTaGCTTCTCTTCTTGGATCTT +
Preference number: 4 (lower is better)
Translates to: SGQGCGRDHQQVSPSADLEVLQD*LLFLDL
Trigger: AAGATCCAAGAAGAGAAGTCAATCCTGCAGAACCTC...GAGGTCAGCACTGGGGGAAACTTGCTGGTGGTCTCTCCCACAACCTTGCCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp GCTAGCCCACGTGATTCCGTGTCATCCATGATGCCTGTTTCATGCAATAGACTGAGGTGTGGATGGTACTaGAGATGGACTGGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: ASPRDSVSSMMPVSCNRLRCGWY*RWTGPA
Trigger: TGCGGGGCCAGTCCATCTTCAGTACCATCCACACCT...CAGTCTATTGCATGAAACAGGCATCATGGATGACACGGAATCACGTGGGCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR TCA 90 bp ATTTGCTGCAGCAGGGCAATCATGCAAGCCACAAAACTCCCGATGTGGGGAGACGCTTTGTGGAGCAGATaGGGGTGGCAATCTGAAAGC +
Preference number: 4 (lower is better)
Translates to: ICCSRAIMQATKLPMWGDALWSR*GWQSES
Trigger: GCTTTCAGATTGCCACCCTCATCTGCTCCACAAAGC...GTCTCCCCACATCGGGAGTTTTGTGGCTTGCATGATTGCCCTGCTGCAGCAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR TCA 90 bp AGAGAGGGACCGGTCCCAGGCATGCTGCTGAACACAGTTGCTGATCCTCTCGTTTCACTGGCTTTACAGTaGAGCACTGCATGTACTGCT +
Preference number: 4 (lower is better)
Translates to: REGPVPGMLLNTVADPLVSLALQ*STACTA
Trigger: AGCAGTACATGCAGTGCTTCACTGTAAAGCCAGTGA...AACGAGAGGATCAGCAACTGTGTTCAGCAGCATGCCTGGGACCGGTCCCTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR TCA 90 bp GGTTTTGGGCTGGTAAACATCATCCCAGATCAGGAAATGCAGTCAGCAGGGAGCGTCCCTTGTAGCCAGTaGTTTGCGCTCAGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: GFGLVNIIPDQEMQSAGSVPCSQ*FALRGG
Trigger: ACCTCCTCTGAGCGCAAATCACTGGCTACAAGGGAC...GCTCCCTGCTGACTGCATTTCCTGATCTGGGATGATGTTTACCAGCCCAAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR TCA 90 bp TCTGGGCAAGGTTGTGGGAGAGACCACCAGCAAGTTTCCCCCAGTGCTGACCTCTACAGCACACCAGAGTaGACTGTCTTTGTATACTGG +
Preference number: 4 (lower is better)
Translates to: SGQGCGRDHQQVSPSADLYSTPE*TVFVYW
Trigger: CCAGTATACAAAGACAGTTCACTCTGGTGTGCTGTA...GAGGTCAGCACTGGGGGAAACTTGCTGGTGGTCTCTCCCACAACCTTGCCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp CAGAATTTATCATTTAGATCCTGGGGGAACCCTATCTATCTACTGTTCAAAGCCCCCCGCGCTCCTGCGTaGCCCAGACGCTTCCGCCAT +
Preference number: 4 (lower is better)
Translates to: QNLSFRSWGNPIYLLFKAPRAPA*PRRFRH
Trigger: ATGGCGGAAGCGTCTGGGGCACGCAGGAGCGCGGGG...GGCTTTGAACAGTAGATAGATAGGGTTCCCCCAGGATCTAAATGATAAATTCTG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000410074.5
CDS-3UTR GCA 90 bp CAGACTGGTAAGTCCCTTGTAGCCAGTGATTTGCGCTCAGAGGAGGTAATAGGACTGTACGTCATCTGCTaGAGCTGGCGGAAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: QTGKSLVASDLRSEEVIGLYVIC*SWRKRV
Trigger: CACCCTCTTCCGCCAGCTGCAGCAGATGACGTACAG...TCCTATTACCTCCTCTGAGCGCAAATCACTGGCTACAAGGGACTTACCAGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp GGTTTTGGGCTGGTAAACATCATCCCAGATCAGGAAATGCAGTCAGCAGGGAGCCATCCTGCAGAGTGGTaGCATCCGGGTTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: GFGLVNIIPDQEMQSAGSHPAEW*HPGSSA
Trigger: AGCTGATGAACCCGGATGGCACCACTCTGCAGGATG...GCTCCCTGCTGACTGCATTTCCTGATCTGGGATGATGTTTACCAGCCCAAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp AATTCCATGTGGACTGGAAGGGAGGTGGCATGGCCTCAAAATTCTATCAAAGAGTCGTGCCTCCCATCCTaGAGAGTGGTGCCATCCGGG +
Preference number: 4 (lower is better)
Translates to: NSMWTGREVAWPQNSIKESCLPS*RVVPSG
Trigger: CCCGGATGGCACCACTCTGCAGGATGGGAGGCACGA...CTCTTTGATAGAATTTTGAGGCCATGCCACCTCCCTTCCAGTCCACATGGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp GCTTGTCAGACCACTGCAGAAGCTCAGCGTGCAAGAGAAGCGTGTAGGCAGCTTTGGAGTTCCTCTGGCTaGCTTCATAGGGCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: ACQTTAEAQRAREACRQLWSSSG*LHRACF
Trigger: AAAGCAAGCCCTATGAAGGCAGCCAGAGGAACTCCA...AAGCTGCCTACACGCTTCTCTTGCACGCTGAGCTTCTGCAGTGGTCTGACAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR GCA 90 bp TCTGGGCAAGGTTGTGGGAGAGACCACCAGCAAGTTTCCCCCAGTGCTGACCTCACATCTGAGAGCTTTTaGTTCCCTGACCCTCATGAT +
Preference number: 4 (lower is better)
Translates to: SGQGCGRDHQQVSPSADLTSESF*FPDPHD
Trigger: ATCATGAGGGTCAGGGAAGCAAAAGCTCTCAGATGT...GAGGTCAGCACTGGGGGAAACTTGCTGGTGGTCTCTCCCACAACCTTGCCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp CAGACTGGTAAGTCCCTTGTAGCCAGTGATTTGCGCTCAGAGGAGGTAATAGGAGTCATCTGCTGCAGCTaGCGGAAGAGGGTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: QTGKSLVASDLRSEEVIGVICCS*RKRVSL
Trigger: CAAGCTCACCCTCTTCCGCCAGCTGCAGCAGATGAC...TCCTATTACCTCCTCTGAGCGCAAATCACTGGCTACAAGGGACTTACCAGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp GCTAGCCCACGTGATTCCGTGTCATCCATGATGCCTGTTTCATGCAATAGACTGGTCATCTGCTGCAGCTaGCGGAAGAGGGTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: ASPRDSVSSMMPVSCNRLVICCS*RKRVSL
Trigger: CAAGCTCACCCTCTTCCGCCAGCTGCAGCAGATGAC...CAGTCTATTGCATGAAACAGGCATCATGGATGACACGGAATCACGTGGGCTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR CCA 90 bp GCATTGCTGACACAAGGACGGCACCCTCTCTGCATTCCAGAGCAGACAGATATGAGAGGGCAATGGTGCTaGTTTCGTCAGGGTCTAGGA +
Preference number: 4 (lower is better)
Translates to: ALLTQGRHPLCIPEQTDMRGQWC*FRQGLG
Trigger: TCCTAGACCCTGACGAAACCAGCACCATTGCCCTCT...CATATCTGTCTGCTCTGGAATGCAGAGAGGGTGCCGTCCTTGTGTCAGCAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR CCA 90 bp ATATGGAGGGCCTCAGTAAAGCTCTGCAAGGATCCTTTCACATGCTCCCAGGCTTTGGAGGCCACCTCATaGGCCTTGAAGAGGGCAATG +
Preference number: 4 (lower is better)
Translates to: IWRASVKLCKDPFTCSQALEATS*ALKRAM
Trigger: CATTGCCCTCTTCAAGGCCCATGAGGTGGCCTCCAA...AGCCTGGGAGCATGTGAAAGGATCCTTGCAGAGCTTTACTGAGGCCCTCCATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR CCA 90 bp GCATTGCTGACACAAGGACGGCACCCTCTCTGCATTCCAGAGCAGACAGATATGGCTTCTCTATTTCCTTaGGCATCCCGTTACTGCCCC +
Preference number: 4 (lower is better)
Translates to: ALLTQGRHPLCIPEQTDMASLFP*ASRYCP
Trigger: GGGGCAGTAACGGGATGCCCAAGGAAATAGAGAAGC...CATATCTGTCTGCTCTGGAATGCAGAGAGGGTGCCGTCCTTGTGTCAGCAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR CCA 90 bp GCTTGTCAGACCACTGCAGAAGCTCAGCGTGCAAGAGAAGCGTGTAGGCAGCTTAGTGCTATCCTTGCTTaGGGTGAAGGTGACCAGGTT +
Preference number: 4 (lower is better)
Translates to: ACQTTAEAQRAREACRQLSAILA*GEGDQV
Trigger: AACCTGGTCACCTTCACCCCAAGCAAGGATAGCACT...AAGCTGCCTACACGCTTCTCTTGCACGCTGAGCTTCTGCAGTGGTCTGACAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CCA 90 bp AGAAGGTATCCAGACAGTGATGTATCCTATCTTCCCAGCCTCTGCTCAAAGACCAACTGGCCGCTGAGCTaGTCTGTCAGCAGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: RRYPDSDVSYLPSLCSKTNWPLS*SVSSGS
Trigger: GCTGCCACTGCTGACAGACCAGCTCAGCGGCCAGTT...GGTCTTTGAGCAGAGGCTGGGAAGATAGGATACATCACTGTCTGGATACCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp TTCTCTTCGGACAGGCAGTGGGGGAGCGAGCTCAGTGGAGTTCCTCTGGCTGCCACTGCTGCACTTCATTaGCTCTGTAGTAGTTTAAGA +
Preference number: 4 (lower is better)
Translates to: FSSDRQWGSELSGVPLAATAALH*LCSSLR
Trigger: TCTTAAACTACTACAGAGCCAATGAAGTGCAGCAGT...GGCAGCCAGAGGAACTCCACTGAGCTCGCTCCCCCACTGCCTGTCCGAAGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CCA 90 bp CCGTTCCATTATAAGCTGAATGTGCACCGCAGTGGCACCCACATCCTTCCTGTCCATCAGATCCCGGTCTaGAAGGAGCATTGTCAGACG +
Preference number: 4 (lower is better)
Translates to: PFHYKLNVHRSGTHILPVHQIPV*KEHCQT
Trigger: CGTCTGACAATGCTCCTTCCAGACCGGGATCTGATG...GACAGGAAGGATGTGGGTGCCACTGCGGTGCACATTCAGCTTATAATGGAACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CCA 90 bp CTCGGTGTTGCAGGGAGGGCAAGATCCTTACTGGGATCCAGGCTCGGAAGTAGGCATCAAATCGGGTTCTaGTGCTTTCTCTGCAATGAC +
Preference number: 4 (lower is better)
Translates to: LGVAGRARSLLGSRLGSRHQIGF*CFLCND
Trigger: GTCATTGCAGAGAAAGCACCAGAACCCGATTTGATG...CCTACTTCCGAGCCTGGATCCCAGTAAGGATCTTGCCCTCCCTGCAACACCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CCA 90 bp AGAAGGTATCCAGACAGTGATGTATCCTATCTTCCCAGCCTCTGCTCAAAGACCTCTTCGGACAGGCAGTaGGGGAGCGAGCTCAGTGGA +
Preference number: 4 (lower is better)
Translates to: RRYPDSDVSYLPSLCSKTSSDRQ*GSELSG
Trigger: TCCACTGAGCTCGCTCCCCCACTGCCTGTCCGAAGA...GGTCTTTGAGCAGAGGCTGGGAAGATAGGATACATCACTGTCTGGATACCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp CAGACTGGTAAGTCCCTTGTAGCCAGTGATTTGCGCTCAGAGGAGGTAATAGGAGAGGGGGTGGTGCTTTaGCTTCTCTTCGGACAGGCA +
Preference number: 4 (lower is better)
Translates to: QTGKSLVASDLRSEEVIGEGVVL*LLFGQA
Trigger: TGCCTGTCCGAAGAGAAGCCAAAGCACCACCCCCTC...TCCTATTACCTCCTCTGAGCGCAAATCACTGGCTACAAGGGACTTACCAGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CCA 90 bp AGAAGGTATCCAGACAGTGATGTATCCTATCTTCCCAGCCTCTGCTCAAAGACCAGACTTCCGAGCCTTTaGAGGTGGAGGGGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: RRYPDSDVSYLPSLCSKTRLPSL*RWRGWC
Trigger: GCACCACCCCCTCCACCTCCAAAGGCTCGGAAGTCT...GGTCTTTGAGCAGAGGCTGGGAAGATAGGATACATCACTGTCTGGATACCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp AGTTCCCGGAAGCAAGAAGACAACCGCTCATGCAGCGGCTTCAGCTGCTCTGTGAGATGCAATATGGGATaGGATCAGTGTGTCCACGTG +
Preference number: 4 (lower is better)
Translates to: SSRKQEDNRSCSGFSCSVRCNMG*DQCVHV
Trigger: CACGTGGACACACTGATCCCATCCCATATTGCATCT...CACAGAGCAGCTGAAGCCGCTGCATGAGCGGTTGTCTTCTTGCTTCCGGGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CCA 90 bp CTCGGTGTTGCAGGGAGGGCAAGATCCTTACTGGGATCCAGGCTCGGAAGTAGGTTCCAAGATGCAATATaGGATGGGATCAGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: LGVAGRARSLLGSRLGSRFQDAI*DGISVS
Trigger: GGACACACTGATCCCATCCCATATTGCATCTTGGAA...CCTACTTCCGAGCCTGGATCCCAGTAAGGATCTTGCCCTCCCTGCAACACCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CCA 90 bp GGTTTTGGGCTGGTAAACATCATCCCAGATCAGGAAATGCAGTCAGCAGGGAGCGTGGCCCAAGGACCATaGCCAGTCTGCAAACAGTCT +
Preference number: 4 (lower is better)
Translates to: GFGLVNIIPDQEMQSAGSVAQGP*PVCKQS
Trigger: AGACTGTTTGCAGACTGGCCATGGTCCTTGGGCCAC...GCTCCCTGCTGACTGCATTTCCTGATCTGGGATGATGTTTACCAGCCCAAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CCA 90 bp GCTAGCCCACGTGATTCCGTGTCATCCATGATGCCTGTTTCATGCAATAGACTGACACTGGCCCATGGGTaGGTCAGCCCTTCACTCTCT +
Preference number: 4 (lower is better)
Translates to: ASPRDSVSSMMPVSCNRLTLAHG*VSPSLS
Trigger: AGAGAGTGAAGGGCTGACCCACCCATGGGCCAGTGT...CAGTCTATTGCATGAAACAGGCATCATGGATGACACGGAATCACGTGGGCTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR CCA 90 bp GCTAGCCCACGTGATTCCGTGTCATCCATGATGCCTGTTTCATGCAATAGACTGAGGAACACTGGCCCATaGGTGGGTCAGCCCTTCACT +
Preference number: 4 (lower is better)
Translates to: ASPRDSVSSMMPVSCNRLRNTGP*VGQPFT
Trigger: AGTGAAGGGCTGACCCACCCATGGGCCAGTGTTCCT...CAGTCTATTGCATGAAACAGGCATCATGGATGACACGGAATCACGTGGGCTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR CCA 90 bp GGGTGGGTCAGCCCTTCACTCTCTCATCTCCTAAACCCTCGCTACAGACAGTGTTCCTGCAGCTCAATATaGAGGGCCTCAGTAAAGCTC +
Preference number: 4 (lower is better)
Translates to: GWVSPSLSHLLNPRYRQCSCSSI*RASVKL
Trigger: GAGCTTTACTGAGGCCCTCCATATTGAGCTGCAGGA...ACACTGTCTGTAGCGAGGGTTTAGGAGATGAGAGAGTGAAGGGCTGACCCACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR CCA 90 bp TATGACTCTGGCTGGTTTGTGGAATTCTCAGTTTGTTCTACTTGTCTGCAGTGGTGGCACGATGGCCCCTaGTGGGACTTGGTCCCGGCA +
Preference number: 4 (lower is better)
Translates to: YDSGWFVEFSVCSTCLQWWHDGP*WDLVPA
Trigger: TGCCGGGACCAAGTCCCACCAGGGGCCATCGTGCCA...CCACTGCAGACAAGTAGAACAAACTGAGAATTCCACAAACCAGCCAGAGTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481100.5
3UTR CAA 72 bp AGGAGGGCGAAGACCTCCCCAGAGCTGGAGAGGTATTaGTGTTTCCGGCAATGTTCTAGGAGCAGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: RRAKTSPELERY*CFRQCSRSSFS
Trigger: GGAAAAACTGCTCCTAGAACATTGCCGGAAACACAAATACCTCTCCAGCTCTGGGGAGGTCTTCGCCCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR TCA 90 bp CACTTCTTCAGAGTGACACGGCTTGAATCTGCTCCCAACAGCTCCTCAATGGCCTACATCTCCAGGATGTaGACTGTGTCACCGATCTGC +
Preference number: 4 (lower is better)
Translates to: HFFRVTRLESAPNSSSMAYISRM*TVSPIC
Trigger: GCAGATCGGTGACACAGTTCACATCCTGGAGATGTA...GGCCATTGAGGAGCTGTTGGGAGCAGATTCAAGCCGTGTCACTCTGAAGAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR TCA 90 bp CCACACCCCTTCCAGAATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACACTTCAGGGGTCAGAGTaGCCTCCAGAATGGGACCCA +
Preference number: 4 (lower is better)
Translates to: PHPFQNLHTHFLSNALDTLQGSE*PPEWDP
Trigger: TGGGTCCCATTCTGGAGGTCACTCTGACCCCTGAAG...TGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATTCTGGAAGGGGTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp CCGTTCCATTATAAGCTGAATGTGCACCGCAGTGGCACCCACATCCTTCCTGTCTTAACAACCTCAGGCTaGAGTCCTCTCGCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: PFHYKLNVHRSGTHILPVLTTSG*SPLASH
Trigger: ATGAGAGGCGAGAGGACTTCAGCCTGAGGTTGTTAA...GACAGGAAGGATGTGGGTGCCACTGCGGTGCACATTCAGCTTATAATGGAACGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR TCA 90 bp ATGGGCATGTGGGAACTTTCTGGGGTGCTGAAAACAGTGTATGTCTCTATCTTAGCTTGGGGGACGACTTaGTGTCTTCCCCAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: MGMWELSGVLKTVYVSILAWGTT*CLPQEA
Trigger: CGCCTCCTGGGGAAGACATCAAGTCGTCCCCCAAGC...TAAGATAGAGACATACACTGTTTTCAGCACCCCAGAAAGTTCCCACATGCCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp AATTCCATGTGGACTGGAAGGGAGGTGGCATGGCCTCAAAATTCTATCAAAGAGTGGTGGCTTTGGGAGTaGGTGGAGGTGGGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: NSMWTGREVAWPQNSIKEWWLWE*VEVGSR
Trigger: CCTTGAGCCCACCTCCACTCACTCCCAAAGCCACCA...CTCTTTGATAGAATTTTGAGGCCATGCCACCTCCCTTCCAGTCCACATGGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR TCA 90 bp CAGACTGGTAAGTCCCTTGTAGCCAGTGATTTGCGCTCAGAGGAGGTAATAGGAGTCCCTTGTAGCCAGTaGTTTGCGCTCAGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: QTGKSLVASDLRSEEVIGVPCSQ*FALRGG
Trigger: ACCTCCTCTGAGCGCAAATCACTGGCTACAAGGGAC...TCCTATTACCTCCTCTGAGCGCAAATCACTGGCTACAAGGGACTTACCAGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR TCA 90 bp CTTGATGTCTTCCCCAGGAGGCGTGGTACTGGTCATCTTCTCCGCATTGGGGAACCTGGTCCAGCTTTGTaGTCAGCTCATTCTCAAAAC +
Preference number: 4 (lower is better)
Translates to: LDVFPRRRGTGHLLRIGEPGPAL*SAHSQN
Trigger: GTTTTGAGAATGAGCTGATCACAAAGCTGGACCAGG...TTCCCCAATGCGGAGAAGATGACCAGTACCACGCCTCCTGGGGAAGACATCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR TCA 90 bp CACTTCTTCAGAGTGACACGGCTTGAATCTGCTCCCAACAGCTCCTCAATGGCCTGCACTTCTTCAGAGTaGCACGGCTTGAATCTGCTC +
Preference number: 4 (lower is better)
Translates to: HFFRVTRLESAPNSSSMACTSSE*HGLNLL
Trigger: GAGCAGATTCAAGCCGTGTCACTCTGAAGAAGTGCA...GGCCATTGAGGAGCTGTTGGGAGCAGATTCAAGCCGTGTCACTCTGAAGAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR TCA 90 bp TTGTCAGAGGCAGAACTCCCCTGCAGCCTAACAAGTTCCCCTGATTCATATGCATGCTGGAGCAGGTCATaGCGTTCACACCTGCACTTC +
Preference number: 4 (lower is better)
Translates to: LSEAELPCSLTSSPDSYACWSRS*RSHLHF
Trigger: GAAGTGCAGGTGTGAACGTCATGACCTGCTCCAGCA...TGCATATGAATCAGGGGAACTTGTTAGGCTGCAGGGGAGTTCTGCCTCTGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR GCA 90 bp GCTTGTCAGACCACTGCAGAAGCTCAGCGTGCAAGAGAAGCGTGTAGGCAGCTTGCAGCAGCACTTCTCTaGACTCTGACTGTCGAAAAA +
Preference number: 4 (lower is better)
Translates to: ACQTTAEAQRAREACRQLAAALL*TLTVEK
Trigger: TTTTTCGACAGTCAGAGTGCAGAGAAGTGCTGCTGC...AAGCTGCCTACACGCTTCTCTTGCACGCTGAGCTTCTGCAGTGGTCTGACAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR GCA 90 bp GGTTTTGGGCTGGTAAACATCATCCCAGATCAGGAAATGCAGTCAGCAGGGAGCGCAGCAGGGCAATCATaGAAGCCACAAAACTCCCGA +
Preference number: 4 (lower is better)
Translates to: GFGLVNIIPDQEMQSAGSAAGQS*KPQNSR
Trigger: TCGGGAGTTTTGTGGCTTGCATGATTGCCCTGCTGC...GCTCCCTGCTGACTGCATTTCCTGATCTGGGATGATGTTTACCAGCCCAAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR GCA 90 bp AGTTCCCGGAAGCAAGAAGACAACCGCTCATGCAGCGGCTTCAGCTGCTCTGTGTTCTCACAGTCTCGGTaGAAATCTCGAAGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: SSRKQEDNRSCSGFSCSVFSQSR*KSRSLY
Trigger: GTACAAGCTTCGAGATTTGCACCGAGACTGTGAGAA...CACAGAGCAGCTGAAGCCGCTGCATGAGCGGTTGTCTTCTTGCTTCCGGGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR GCA 90 bp AATTCCATGTGGACTGGAAGGGAGGTGGCATGGCCTCAAAATTCTATCAAAGAGCACCTGACGAGGCCCTaGGCTCCAAAAGTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: NSMWTGREVAWPQNSIKEHLTRP*APKVAP
Trigger: TGGAGCCACTTTTGGAGCGCAGGGCCTCGTCAGGTG...CTCTTTGATAGAATTTTGAGGCCATGCCACCTCCCTTCCAGTCCACATGGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR GCA 90 bp AGTTCCCGGAAGCAAGAAGACAACCGCTCATGCAGCGGCTTCAGCTGCTCTGTGACTCTTTGGCCTTTGTaGTTTTCTGGTTGGGCTCAT +
Preference number: 4 (lower is better)
Translates to: SSRKQEDNRSCSGFSCSVTLWPL*FSGWAH
Trigger: ATGAGCCCAACCAGAAAAGCACAAAGGCCAAAGAGT...CACAGAGCAGCTGAAGCCGCTGCATGAGCGGTTGTCTTCTTGCTTCCGGGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR GCA 90 bp GGTTTTGGGCTGGTAAACATCATCCCAGATCAGGAAATGCAGTCAGCAGGGAGCACTTGTCCAGGCTTGTaGAGACCACCATGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: GFGLVNIIPDQEMQSAGSTCPGL*RPPCLC
Trigger: GCAGAGACATGGTGGTCTGCACAAGCCTGGACAAGT...GCTCCCTGCTGACTGCATTTCCTGATCTGGGATGATGTTTACCAGCCCAAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR GCA 90 bp CCTGTGCAGGTGCTGGAGCAGGTCATGACGTTCACACCTGCACTTCTTCAGAGTGCCTCAGTAAAGCTCTaGAAGGATCCTTTCACATGC +
Preference number: 4 (lower is better)
Translates to: PVQVLEQVMTFTPALLQSASVKL*KDPFTC
Trigger: GCATGTGAAAGGATCCTTGCAGAGCTTTACTGAGGC...ACTCTGAAGAAGTGCAGGTGTGAACGTCATGACCTGCTCCAGCACCTGCACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR GCA 90 bp TATGACTCTGGCTGGTTTGTGGAATTCTCAGTTTGTTCTACTTGTCTGCAGTGGCCACTAGGCCTCCACTaGCTGTGCAGGTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: YDSGWFVEFSVCSTCLQWPLGLH*LCRCWS
Trigger: GCTCCAGCACCTGCACAGGCAGTGGAGGCCTAGTGG...CCACTGCAGACAAGTAGAACAAACTGAGAATTCCACAAACCAGCCAGAGTCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR CCA 90 bp TCTCAAAGCCTGCTTTATATCTTGTTCTACATTAGGAAATTGCAGTGTGGCTGCTCCGCCAAACTTCGCTaGACTCCGCGGGCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: SQSLLYILFYIRKLQCGCSAKLR*TPRAAS
Trigger: GGAGGCGGCCCGCGGAGTCCAGCGAAGTTTGGCGGA...GCAGCCACACTGCAATTTCCTAATGTAGAACAAGATATAAAGCAGGCTTTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp GGCTGGTTTGTGGAATTCTCAGTTTGTTCTACTTGTCTGCAGTGGCAGCTGCAACTGCCAGTTCATCCTTaGGGAGCGTCCCAGACAGGA +
Preference number: 4 (lower is better)
Translates to: GWFVEFSVCSTCLQWQLQLPVHP*GASQTG
Trigger: TCCTGTCTGGGACGCTCCCCAAGGATGAACTGGCAG...TTGCAGCTGCCACTGCAGACAAGTAGAACAAACTGAGAATTCCACAAACCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR CCA 90 bp AATATGGAGGGCCTCAGTAAAGCTCTGCAAGGATCCTTTCACATGCTCCCAGGCGTACTGAAGATGGACTaGCCCCGCAAATCGAGGTTC +
Preference number: 4 (lower is better)
Translates to: NMEGLSKALQGSFHMLPGVLKMD*PRKSRF
Trigger: GAACCTCGATTTGCGGGGCCAGTCCATCTTCAGTAC...GCCTGGGAGCATGTGAAAGGATCCTTGCAGAGCTTTACTGAGGCCCTCCATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR CCA 90 bp GGGTGGGTCAGCCCTTCACTCTCTCATCTCCTAAACCCTCGCTACAGACAGTGTAAAAGTGGACTGGTCTaGGTCGTAGAGGGCCATAAA +
Preference number: 4 (lower is better)
Translates to: GWVSPSLSHLLNPRYRQCKSGLV*VVEGHK
Trigger: TTTATGGCCCTCTACGACCCAGACCAGTCCACTTTT...ACACTGTCTGTAGCGAGGGTTTAGGAGATGAGAGAGTGAAGGGCTGACCCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR CCA 90 bp CAGACTGGTAAGTCCCTTGTAGCCAGTGATTTGCGCTCAGAGGAGGTAATAGGATCCCATCCTGCAGAGTaGTGCCATCCGGGTTCATCA +
Preference number: 4 (lower is better)
Translates to: QTGKSLVASDLRSEEVIGSHPAE*CHPGSS
Trigger: TGATGAACCCGGATGGCACCACTCTGCAGGATGGGA...TCCTATTACCTCCTCTGAGCGCAAATCACTGGCTACAAGGGACTTACCAGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp CCATCTCTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAAACTGGCCGCTGAGCTaGTCTGTCAGCAGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: PSLPRCNMGWDQCVHVRKNWPLS*SVSSGS
Trigger: GCTGCCACTGCTGACAGACCAGCTCAGCGGCCAGTT...TTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAGAGATGG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CCA 90 bp CCGTTCCATTATAAGCTGAATGTGCACCGCAGTGGCACCCACATCCTTCCTGTCCGGCAAGCTCATCACTaGCTTTACAGTGAAGCACTG +
Preference number: 4 (lower is better)
Translates to: PFHYKLNVHRSGTHILPVRQAHH*LYSEAL
Trigger: CAGTGCTTCACTGTAAAGCCAGTGATGAGCTTGCCG...GACAGGAAGGATGTGGGTGCCACTGCGGTGCACATTCAGCTTATAATGGAACGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CCA 90 bp CCCGGTCTGGAAGGAGCATTGTCAGACGAGTTTGAAGAGGTGGAAACCACAGAGGTTTATCCTTGTAGCTaGGCGGCAAGCTCATCACTG +
Preference number: 4 (lower is better)
Translates to: PGLEGALSDEFEEVETTEVYPCS*AASSSL
Trigger: CAGTGATGAGCTTGCCGCCCAGCTACAAGGATAAAC...CTCTGTGGTTTCCACCTCTTCAAACTCGTCTGACAATGCTCCTTCCAGACCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CCA 90 bp CTTGATGTCTTCCCCAGGAGGCGTGGTACTGGTCATCTTCTCCGCATTGGGGAAATGCAGTCGTATACGTaGTCCGTTCAATCCACATCG +
Preference number: 4 (lower is better)
Translates to: LDVFPRRRGTGHLLRIGEMQSYT*SVQSTS
Trigger: CGATGTGGATTGAACGGACCACGTATACGACTGCAT...TTCCCCAATGCGGAGAAGATGACCAGTACCACGCCTCCTGGGGAAGACATCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CCA 90 bp ATTTGCTGCAGCAGGGCAATCATGCAAGCCACAAAACTCCCGATGTGGGGAGACTTCTCTGCAATGACCTaGGACTTGCTCAGACTCCAG +
Preference number: 4 (lower is better)
Translates to: ICCSRAIMQATKLPMWGDFSAMT*DLLRLQ
Trigger: CTGGAGTCTGAGCAAGTCCCAGGTCATTGCAGAGAA...GTCTCCCCACATCGGGAGTTTTGTGGCTTGCATGATTGCCCTGCTGCAGCAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CCA 90 bp CTTTGTGCTTTTCTGGTTGGGCTCATCAAATCGGGTTCTGGTGCTTTCTCTGCAGGCTTTGGGAGTGAGTaGAGGTGGGCTCAAGGGTGT +
Preference number: 4 (lower is better)
Translates to: LCAFLVGLIKSGSGAFSAGFGSE*RWAQGC
Trigger: ACACCCTTGAGCCCACCTCCACTCACTCCCAAAGCC...TGCAGAGAAAGCACCAGAACCCGATTTGATGAGCCCAACCAGAAAAGCACAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CCA 90 bp CCACACCCCTTCCAGAATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACAAATGAGGACACCGGCTaGAGGCCAGTTCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: PHPFQNLHTHFLSNALDTNEDTG*RPVLRQ
Trigger: CTGCCTGAGAACTGGCCTCCAGCCGGTGTCCTCATT...TGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATTCTGGAAGGGGTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp AGAGAGGGACCGGTCCCAGGCATGCTGCTGAACACAGTTGCTGATCCTCTCGTTGGAAGGGAGGTGGCATaGCCTCAAAATTCTATCAAA +
Preference number: 4 (lower is better)
Translates to: REGPVPGMLLNTVADPLVGREVA*PQNSIK
Trigger: TTTGATAGAATTTTGAGGCCATGCCACCTCCCTTCC...AACGAGAGGATCAGCAACTGTGTTCAGCAGCATGCCTGGGACCGGTCCCTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CCA 90 bp TCTGGGCAAGGTTGTGGGAGAGACCACCAGCAAGTTTCCCCCAGTGCTGACCTCGACAAGTATAGTCCATaGACCTCAAAGCCTTTGTAC +
Preference number: 4 (lower is better)
Translates to: SGQGCGRDHQQVSPSADLDKYSP*TSKPLY
Trigger: GTACAAAGGCTTTGAGGTCCATGGACTATACTTGTC...GAGGTCAGCACTGGGGGAAACTTGCTGGTGGTCTCTCCCACAACCTTGCCCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp CCTGTGCAGGTGCTGGAGCAGGTCATGACGTTCACACCTGCACTTCTTCAGAGTAGGTCTCAAGTCACCTaGGACACATGCCAAAGTACT +
Preference number: 4 (lower is better)
Translates to: PVQVLEQVMTFTPALLQSRSQVT*DTCQST
Trigger: AGTACTTTGGCATGTGTCCCAGGTGACTTGAGACCT...ACTCTGAAGAAGTGCAGGTGTGAACGTCATGACCTGCTCCAGCACCTGCACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR TCA 90 bp ATGGGCATGTGGGAACTTTCTGGGGTGCTGAAAACAGTGTATGTCTCTATCTTACCACCTCATGGGCCTTaGAGAGGGCAATGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: MGMWELSGVLKTVYVSILPPHGP*RGQWCW
Trigger: CCAGCACCATTGCCCTCTTCAAGGCCCATGAGGTGG...TAAGATAGAGACATACACTGTTTTCAGCACCCCAGAAAGTTCCCACATGCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp GGGTGGGTCAGCCCTTCACTCTCTCATCTCCTAAACCCTCGCTACAGACAGTGTGAGGTTCTGCAGGATTaGCTTCTCTTCTTGGATCTT +
Preference number: 4 (lower is better)
Translates to: GWVSPSLSHLLNPRYRQCEVLQD*LLFLDL
Trigger: AAGATCCAAGAAGAGAAGTCAATCCTGCAGAACCTC...ACACTGTCTGTAGCGAGGGTTTAGGAGATGAGAGAGTGAAGGGCTGACCCACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR TCA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTAGGTGTGGATGGTACTaGAGATGGACTGGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPRCGWY*RWTGPA
Trigger: TGCGGGGCCAGTCCATCTTCAGTACCATCCACACCT...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp CCGTTCCATTATAAGCTGAATGTGCACCGCAGTGGCACCCACATCCTTCCTGTCGAAGGGACTCATGGGTaGGAAATGCAACTGCCAAAT +
Preference number: 4 (lower is better)
Translates to: PFHYKLNVHRSGTHILPVEGTHG*EMQLPN
Trigger: ATTTGGCAGTTGCATTTCTCACCCATGAGTCCCTTC...GACAGGAAGGATGTGGGTGCCACTGCGGTGCACATTCAGCTTATAATGGAACGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR TCA 90 bp ATTTGCTGCAGCAGGGCAATCATGCAAGCCACAAAACTCCCGATGTGGGGAGACGCAAAGTATTCAGGCTaGGGCCTCATTGCCTTAATG +
Preference number: 4 (lower is better)
Translates to: ICCSRAIMQATKLPMWGDAKYSG*GLIALM
Trigger: CATTAAGGCAATGAGGCCTCAGCCTGAATACTTTGC...GTCTCCCCACATCGGGAGTTTTGTGGCTTGCATGATTGCCCTGCTGCAGCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR TCA 90 bp AGCACGGAGAAAAACCCTGTTTTGAGTCATATTCATCACCATCCAATCTTTGGCGCTTGGGGGACGACTTaGTGTCTTCCCCAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: STEKNPVLSHIHHHPIFGAWGTT*CLPQEA
Trigger: CGCCTCCTGGGGAAGACATCAAGTCGTCCCCCAAGC...GCCAAAGATTGGATGGTGATGAATATGACTCAAAACAGGGTTTTTCTCCGTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR TCA 90 bp CCACACCCCTTCCAGAATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACAACGGCCGGGAGTATCTaGACTGCTGCACTTCATTGG +
Preference number: 4 (lower is better)
Translates to: PHPFQNLHTHFLSNALDTTAGSI*TAALHW
Trigger: CCAATGAAGTGCAGCAGTTCAGATACTCCCGGCCGT...TGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATTCTGGAAGGGGTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp CTTGATGTCTTCCCCAGGAGGCGTGGTACTGGTCATCTTCTCCGCATTGGGGAAATTGTCAGACGAGTTTaGAGAGGTGGAAACCACAGA +
Preference number: 4 (lower is better)
Translates to: LDVFPRRRGTGHLLRIGEIVRRV*RGGNHR
Trigger: TCTGTGGTTTCCACCTCTTCAAACTCGTCTGACAAT...TTCCCCAATGCGGAGAAGATGACCAGTACCACGCCTCCTGGGGAAGACATCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR TCA 90 bp CAGACTGGTAAGTCCCTTGTAGCCAGTGATTTGCGCTCAGAGGAGGTAATAGGAAAGTGGCTCCAAGATTaGGCCATCAGATCCCGGTCT +
Preference number: 4 (lower is better)
Translates to: QTGKSLVASDLRSEEVIGKWLQD*AIRSRS
Trigger: AGACCGGGATCTGATGGCTCAATCTTGGAGCCACTT...TCCTATTACCTCCTCTGAGCGCAAATCACTGGCTACAAGGGACTTACCAGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR TCA 90 bp CAGACTGGTAAGTCCCTTGTAGCCAGTGATTTGCGCTCAGAGGAGGTAATAGGAGTGCTTTCTCTGCAATaGCCTGGGACTTGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: QTGKSLVASDLRSEEVIGVLSLQ*PGTCSD
Trigger: GTCTGAGCAAGTCCCAGGTCATTGCAGAGAAAGCAC...TCCTATTACCTCCTCTGAGCGCAAATCACTGGCTACAAGGGACTTACCAGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR TCA 90 bp ATGGGCATGTGGGAACTTTCTGGGGTGCTGAAAACAGTGTATGTCTCTATCTTATGGTGGCTTTGGGAGTaGGTGGAGGTGGGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: MGMWELSGVLKTVYVSILWWLWE*VEVGSR
Trigger: CCTTGAGCCCACCTCCACTCACTCCCAAAGCCACCA...TAAGATAGAGACATACACTGTTTTCAGCACCCCAGAAAGTTCCCACATGCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp CCGTTCCATTATAAGCTGAATGTGCACCGCAGTGGCACCCACATCCTTCCTGTCATCAGAGGCTGTGACTaGTTCTGGAATTCCATGTGG +
Preference number: 4 (lower is better)
Translates to: PFHYKLNVHRSGTHILPVIRGCD*FWNSMW
Trigger: CCACATGGAATTCCAGAATCAGTCACAGCCTCTGAT...GACAGGAAGGATGTGGGTGCCACTGCGGTGCACATTCAGCTTATAATGGAACGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR TCA 90 bp GGCTGGTTTGTGGAATTCTCAGTTTGTTCTACTTGTCTGCAGTGGCAGCTGCAACAGAGTGACACGGCTTaGATCTGCTCCCAACAGCTC +
Preference number: 4 (lower is better)
Translates to: GWFVEFSVCSTCLQWQLQQSDTA*ICSQQL
Trigger: GAGCTGTTGGGAGCAGATTCAAGCCGTGTCACTCTG...TTGCAGCTGCCACTGCAGACAAGTAGAACAAACTGAGAATTCCACAAACCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR GCA 90 bp GCATTGCTGACACAAGGACGGCACCCTCTCTGCATTCCAGAGCAGACAGATATGTGGGCATCCCGTTACTaGCCCAACGAATTAGATAGT +
Preference number: 4 (lower is better)
Translates to: ALLTQGRHPLCIPEQTDMWASRY*PNELDS
Trigger: ACTATCTAATTCGTTGGGGCAGTAACGGGATGCCCA...CATATCTGTCTGCTCTGGAATGCAGAGAGGGTGCCGTCCTTGTGTCAGCAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR GCA 90 bp CACTTCTTCAGAGTGACACGGCTTGAATCTGCTCCCAACAGCTCCTCAATGGCCCACAGGTGTGCTTCTTaGCTTCCTTCAGCTCCATAT +
Preference number: 4 (lower is better)
Translates to: HFFRVTRLESAPNSSSMAHRCAS*LPSAPY
Trigger: ATATGGAGCTGAAGGAAGGCAAGAAGCACACCTGTG...GGCCATTGAGGAGCTGTTGGGAGCAGATTCAAGCCGTGTCACTCTGAAGAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR GCA 90 bp AGAAGGTATCCAGACAGTGATGTATCCTATCTTCCCAGCCTCTGCTCAAAGACCCGGAGTCCACAGGTGTaGTTCTTGCCTTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: RRYPDSDVSYLPSLCSKTRSPQV*FLPSFS
Trigger: GCTGAAGGAAGGCAAGAAGCACACCTGTGGACTCCG...GGTCTTTGAGCAGAGGCTGGGAAGATAGGATACATCACTGTCTGGATACCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp GGTTTTGGGCTGGTAAACATCATCCCAGATCAGGAAATGCAGTCAGCAGGGAGCAGCACCAGGGTGAATTaGTTTCTCCAAGAGCTTGCC +
Preference number: 4 (lower is better)
Translates to: GFGLVNIIPDQEMQSAGSSTRVN*FLQELA
Trigger: GGCAAGCTCTTGGAGAAAGCAATTCACCCTGGTGCT...GCTCCCTGCTGACTGCATTTCCTGATCTGGGATGATGTTTACCAGCCCAAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp AGTTACAGACACTGGGGATTTCTTTCTGATCATACAATGGCGAAATCCACAGTCTCGTGCCTCCCATCCTaGAGAGTGGTGCCATCCGGG +
Preference number: 4 (lower is better)
Translates to: SYRHWGFLSDHTMAKSTVSCLPS*RVVPSG
Trigger: CCCGGATGGCACCACTCTGCAGGATGGGAGGCACGA...GACTGTGGATTTCGCCATTGTATGATCAGAAAGAAATCCCCAGTGTCTGTAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR GCA 90 bp CTTTGTGCTTTTCTGGTTGGGCTCATCAAATCGGGTTCTGGTGCTTTCTCTGCACCGATGTGGGGAGACTaGCGGTTCATCCCAATCACT +
Preference number: 4 (lower is better)
Translates to: LCAFLVGLIKSGSGAFSAPMWGD*RFIPIT
Trigger: AGTGATTGGGATGAACCGGCAGTCTCCCCACATCGG...TGCAGAGAAAGCACCAGAACCCGATTTGATGAGCCCAACCAGAAAAGCACAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR GCA 90 bp CAGACTGGTAAGTCCCTTGTAGCCAGTGATTTGCGCTCAGAGGAGGTAATAGGATGGCTGTCGTCCATTTaGTGCAGCAGGGCAATCATG +
Preference number: 4 (lower is better)
Translates to: QTGKSLVASDLRSEEVIGWLSSI*CSRAIM
Trigger: CATGATTGCCCTGCTGCAGCAAATGGACGACAGCCA...TCCTATTACCTCCTCTGAGCGCAAATCACTGGCTACAAGGGACTTACCAGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR GCA 90 bp AATTCCATGTGGACTGGAAGGGAGGTGGCATGGCCTCAAAATTCTATCAAAGAGGACCCCGTGCGGCTTTaGTTCCTCTCCGTCAAGTTG +
Preference number: 4 (lower is better)
Translates to: NSMWTGREVAWPQNSIKEDPVRL*FLSVKL
Trigger: CAACTTGACGGAGAGGAAGCAAAGCCGCACGGGGTC...CTCTTTGATAGAATTTTGAGGCCATGCCACCTCCCTTCCAGTCCACATGGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CCA 90 bp TCCTGGGGGAACCCTATCTATCTACTGTTCAAAGCCAACAACAATGGCACTATTCGTACTTCTGCCTCTTaGTCGGGATCCAGCGGGCCA +
Preference number: 4 (lower is better)
Translates to: SWGNPIYLLFKANNNGTIRTSAS*SGSSGP
Trigger: TGGCCCGCTGGATCCCGACCAAGAGGCAGAAGTACG...AATAGTGCCATTGTTGTTGGCTTTGAACAGTAGATAGATAGGGTTCCCCCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410074.5
CDS-3UTR CCA 90 bp AGTTACAGACACTGGGGATTTCTTTCTGATCATACAATGGCGAAATCCACAGTCCCCACGCGGACAATCTaGCACACAAGGCTGACGCGG +
Preference number: 4 (lower is better)
Translates to: SYRHWGFLSDHTMAKSTVPTRTI*HTRLTR
Trigger: CCGCGTCAGCCTTGTGTGCCAGATTGTCCGCGTGGG...GACTGTGGATTTCGCCATTGTATGATCAGAAAGAAATCCCCAGTGTCTGTAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CCA 90 bp CTTGATGTCTTCCCCAGGAGGCGTGGTACTGGTCATCTTCTCCGCATTGGGGAACAACTGGAGACTCTTTaGCCTTTGTGCTTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: LDVFPRRRGTGHLLRIGEQLETL*PLCFSG
Trigger: ACCAGAAAAGCACAAAGGCCAAAGAGTCTCCAGTTG...TTCCCCAATGCGGAGAAGATGACCAGTACCACGCCTCCTGGGGAAGACATCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CCA 90 bp TCTGGTTTTGAAAGTGCTGATGTAGTGGCTATAGTGGCTGTCGTCCATTTGCTGAATGAGGACACCGGCTaGAGGCCAGTTCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: SGFESADVVAIVAVVHLLNEDTG*RPVLRQ
Trigger: CTGCCTGAGAACTGGCCTCCAGCCGGTGTCCTCATT...CAGCAAATGGACGACAGCCACTATAGCCACTACATCAGCACTTTCAAAACCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CCA 90 bp AATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACATCTGAGAGCTTTTGCCAGCAGGGAGCCCCATaGAATGAGGACACCGGCTGG +
Preference number: 4 (lower is better)
Translates to: NLHTHFLSNALDTSESFCQQGAP*NEDTGW
Trigger: CCAGCCGGTGTCCTCATTCCATGGGGCTCCCTGCTG...GCAAAAGCTCTCAGATGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp CTTCTGTTCAGCTCCTATCTGACAATCTTGCAGCTTAGAATCTTTCCTTCTCTGCACGATGGCCCCTGGTaGGACTTGGTCCCGGCAATG +
Preference number: 4 (lower is better)
Translates to: LLFSSYLTILQLRIFPSLHDGPW*DLVPAM
Trigger: CATTGCCGGGACCAAGTCCCACCAGGGGCCATCGTG...CAGAGAAGGAAAGATTCTAAGCTGCAAGATTGTCAGATAGGAGCTGAACAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR TCA 90 bp GGTTTTGGGCTGGTAAACATCATCCCAGATCAGGAAATGCAGTCAGCAGGGAGCCACCGTGGATCAGGGTaGCATAAATGTCATTCCGAA +
Preference number: 4 (lower is better)
Translates to: GFGLVNIIPDQEMQSAGSHRGSG*HKCHSE
Trigger: TTCGGAATGACATTTATGTCACCCTGATCCACGGTG...GCTCCCTGCTGACTGCATTTCCTGATCTGGGATGATGTTTACCAGCCCAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp CAGACTGGTAAGTCCCTTGTAGCCAGTGATTTGCGCTCAGAGGAGGTAATAGGATATCCAGCACCAGGGTaGATTGCTTTCTCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: QTGKSLVASDLRSEEVIGYPAPG*IAFSKS
Trigger: GCTCTTGGAGAAAGCAATTCACCCTGGTGCTGGATA...TCCTATTACCTCCTCTGAGCGCAAATCACTGGCTACAAGGGACTTACCAGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp CAGACTGGTAAGTCCCTTGTAGCCAGTGATTTGCGCTCAGAGGAGGTAATAGGAGAGAAGGTTTCAAGCTaGAGGGACTCATGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: QTGKSLVASDLRSEEVIGEKVSS*RDSWVR
Trigger: TCTCACCCATGAGTCCCTTCAGCTTGAAACCTTCTC...TCCTATTACCTCCTCTGAGCGCAAATCACTGGCTACAAGGGACTTACCAGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR TCA 90 bp AATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACATCTGAGAGCTTTTGCTTCAACTCTGGCACCTaGCGAGGCCCTGCGCTCCAA +
Preference number: 4 (lower is better)
Translates to: NLHTHFLSNALDTSESFCFNSGT*RGPALQ
Trigger: TTGGAGCGCAGGGCCTCGTCAGGTGCCAGAGTTGAA...GCAAAAGCTCTCAGATGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp CCGTTCCATTATAAGCTGAATGTGCACCGCAGTGGCACCCACATCCTTCCTGTCATCAGTGTGTCCACGTaGGAAAAGTACCTAAGTCTC +
Preference number: 4 (lower is better)
Translates to: PFHYKLNVHRSGTHILPVISVST*EKYLSL
Trigger: GAGACTTAGGTACTTTTCTCACGTGGACACACTGAT...GACAGGAAGGATGTGGGTGCCACTGCGGTGCACATTCAGCTTATAATGGAACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR TCA 90 bp CCACACCCCTTCCAGAATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACAAGCAGATGCGGCTGCTaGGTCACCCAAATGGGTTTT +
Preference number: 4 (lower is better)
Translates to: PHPFQNLHTHFLSNALDTSRCGC*VTQMGF
Trigger: AAAACCCATTTGGGTGACTCAGCAGCCGCATCTGCT...TGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATTCTGGAAGGGGTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp AATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACATCTGAGAGCTTTTGCAGCCGGTCTGCTGGGTaGCTTCTCAGAAGTCGTGCC +
Preference number: 4 (lower is better)
Translates to: NLHTHFLSNALDTSESFCSRSAG*LLRSRA
Trigger: GGCACGACTTCTGAGAAGTCACCCAGCAGACCGGCT...GCAAAAGCTCTCAGATGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp GGGTGGGTCAGCCCTTCACTCTCTCATCTCCTAAACCCTCGCTACAGACAGTGTTGTTCAGCTCCTATCTaGCAATCTTGCAGCTTAGAA +
Preference number: 4 (lower is better)
Translates to: GWVSPSLSHLLNPRYRQCCSAPI*QSCSLE
Trigger: TTCTAAGCTGCAAGATTGTCAGATAGGAGCTGAACA...ACACTGTCTGTAGCGAGGGTTTAGGAGATGAGAGAGTGAAGGGCTGACCCACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR GCA 90 bp CCTGGGGGAACCCTATCTATCTACTGTTCAAAGCCAACAACAATGGCACTATTAGCAACCCCGTACTTCTaGCTCTTGGTCGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: PGGTLSIYCSKPTTMALLATPYF*LLVGIQ
Trigger: CTGGATCCCGACCAAGAGGCAGAAGTACGGGGTTGC...TAATAGTGCCATTGTTGTTGGCTTTGAACAGTAGATAGATAGGGTTCCCCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410074.5
CDS-3UTR GCA 90 bp TTGTCAGAGGCAGAACTCCCCTGCAGCCTAACAAGTTCCCCTGATTCATATGCAACTGTGTCACCGATCTaGAAGGAGAGCTCCACATCT +
Preference number: 4 (lower is better)
Translates to: LSEAELPCSLTSSPDSYATVSPI*KESSTS
Trigger: AGATGTGGAGCTCTCCTTGCAGATCGGTGACACAGT...TGCATATGAATCAGGGGAACTTGTTAGGCTGCAGGGGAGTTCTGCCTCTGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR GCA 90 bp AATATGGAGGGCCTCAGTAAAGCTCTGCAAGGATCCTTTCACATGCTCCCAGGCTTTCTTCTTGAGCTCTaGCAGTTCATCCTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: NMEGLSKALQGSFHMLPGFLLEL*QFILGE
Trigger: CTCCCCAAGGATGAACTGGCAGAGCTCAAGAAGAAA...GCCTGGGAGCATGTGAAAGGATCCTTGCAGAGCTTTACTGAGGCCCTCCATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR GCA 90 bp GGTTTTGGGCTGGTAAACATCATCCCAGATCAGGAAATGCAGTCAGCAGGGAGCTGGGCATCCCGTTACTaGCCCAACGAATTAGATAGT +
Preference number: 4 (lower is better)
Translates to: GFGLVNIIPDQEMQSAGSWASRY*PNELDS
Trigger: ACTATCTAATTCGTTGGGGCAGTAACGGGATGCCCA...GCTCCCTGCTGACTGCATTTCCTGATCTGGGATGATGTTTACCAGCCCAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp CCTGTGCAGGTGCTGGAGCAGGTCATGACGTTCACACCTGCACTTCTTCAGAGTAGTAATATCCATCACTaGCACTCCAAAAGGTCTTCG +
Preference number: 4 (lower is better)
Translates to: PVQVLEQVMTFTPALLQSSNIHH*HSKRSS
Trigger: CGAAGACCTTTTGGAGTGGCAGTGATGGATATTACT...ACTCTGAAGAAGTGCAGGTGTGAACGTCATGACCTGCTCCAGCACCTGCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR GCA 90 bp CCACACCCCTTCCAGAATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACACTTTCTCCAAGAGCTTaGCCTCCTCATCGTGCACAG +
Preference number: 4 (lower is better)
Translates to: PHPFQNLHTHFLSNALDTLSPRA*PPHRAQ
Trigger: CTGTGCACGATGAGGAGGGCAAGCTCTTGGAGAAAG...TGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATTCTGGAAGGGGTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp TCTGGGCAAGGTTGTGGGAGAGACCACCAGCAAGTTTCCCCCAGTGCTGACCTCAGTACAGGATTAAAATaGTGGAACTTGATGTCTCCT +
Preference number: 4 (lower is better)
Translates to: SGQGCGRDHQQVSPSADLSTGLK*WNLMSP
Trigger: AGGAGACATCAAGTTCCAGCATTTTAATCCTGTACT...GAGGTCAGCACTGGGGGAAACTTGCTGGTGGTCTCTCCCACAACCTTGCCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp CCATCTCTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAACCGATGTGGGGAGACTaGCGGTTCATCCCAATCACT +
Preference number: 4 (lower is better)
Translates to: PSLPRCNMGWDQCVHVRKPMWGD*RFIPIT
Trigger: AGTGATTGGGATGAACCGGCAGTCTCCCCACATCGG...TTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAGAGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR GCA 90 bp CCATCTCTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGGCTTGTCAGACCACTaGAGAAGCTCAGCGTGCAAG +
Preference number: 4 (lower is better)
Translates to: PSLPRCNMGWDQCVHVRKGLSDH*RSSACK
Trigger: CTTGCACGCTGAGCTTCTGCAGTGGTCTGACAAGCC...TTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAGAGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR GCA 90 bp CTCGGTGTTGCAGGGAGGGCAAGATCCTTACTGGGATCCAGGCTCGGAAGTAGGTCTTCAGGATGCTCCTaGAAGTACTTTTCTGTAAAA +
Preference number: 4 (lower is better)
Translates to: LGVAGRARSLLGSRLGSRSSGCS*KYFSVK
Trigger: TTTTACAGAAAAGTACTTGCAGGAGCATCCTGAAGA...CCTACTTCCGAGCCTGGATCCCAGTAAGGATCTTGCCCTCCCTGCAACACCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR GCA 90 bp CAACTGCCAAATGGAAGTAATTGTTCCAGAGCTGAAGTTCAAAGCTTGCCTGATCACCTGACGAGGCCCTaGGCTCCAAAAGTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: QLPNGSNCSRAEVQSLPDHLTRP*APKVAP
Trigger: TGGAGCCACTTTTGGAGCGCAGGGCCTCGTCAGGTG...ATCAGGCAAGCTTTGAACTTCAGCTCTGGAACAATTACTTCCATTTGGCAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR GCA 90 bp GGTTTTGGGCTGGTAAACATCATCCCAGATCAGGAAATGCAGTCAGCAGGGAGCGGGACTCATTTCTACTaGTCTGGAAGGATAGCCTTG +
Preference number: 4 (lower is better)
Translates to: GFGLVNIIPDQEMQSAGSGTHFY*SGRIAL
Trigger: CAAGGCTATCCTTCCAGAGCAGTAGAAATGAGTCCC...GCTCCCTGCTGACTGCATTTCCTGATCTGGGATGATGTTTACCAGCCCAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTGGACCATGGCCAGTCTaGAAACAGTCTGGACCCATC +
Preference number: 4 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPGPWPV*KQSGPI
Trigger: GATGGGTCCAGACTGTTTGCAGACTGGCCATGGTCC...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CCA 90 bp TTCAGGCAGGAGAGAGCTATTATTTCCATTAAGGTGGAAAGGGAATCATACGGAGTCCCAGACAGGATCTaGGACCGCCACTCGATCAGG +
Preference number: 4 (lower is better)
Translates to: FRQERAIISIKVERESYGVPDRI*DRHSIR
Trigger: CCTGATCGAGTGGCGGTCCCAGATCCTGTCTGGGAC...TCCGTATGATTCCCTTTCCACCTTAATGGAAATAATAGCTCTCTCCTGCCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp TTGTCAGAGGCAGAACTCCCCTGCAGCCTAACAAGTTCCCCTGATTCATATGCATTTCCTCAATCCTTTTaGAGGCCACCTCATGGGCCT +
Preference number: 4 (lower is better)
Translates to: LSEAELPCSLTSSPDSYAFPQSF*RPPHGP
Trigger: AGGCCCATGAGGTGGCCTCCAAAAGGATTGAGGAAA...TGCATATGAATCAGGGGAACTTGTTAGGCTGCAGGGGAGTTCTGCCTCTGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR CCA 90 bp CCATCTCTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAATGCGAGCTTGCCTCGTaGTCAGGCTTGTTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: PSLPRCNMGWDQCVHVRKCELAS*SGLLEL
Trigger: CAACTCCAACAAGCCTGACCACGAGGCAAGCTCGCA...TTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAGAGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CCA 90 bp CCACACCCCTTCCAGAATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACAACAAAACTCCCGATGTaGGGAGACTGCCGGTTCATC +
Preference number: 4 (lower is better)
Translates to: PHPFQNLHTHFLSNALDTTKLPM*GDCRFI
Trigger: GATGAACCGGCAGTCTCCCCACATCGGGAGTTTTGT...TGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATTCTGGAAGGGGTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp AATTCCATGTGGACTGGAAGGGAGGTGGCATGGCCTCAAAATTCTATCAAAGAGCCCCCTTCTACCTCCTaGTCCAGCTTTGTGATCAGC +
Preference number: 4 (lower is better)
Translates to: NSMWTGREVAWPQNSIKEPPSTS*SSFVIS
Trigger: GCTGATCACAAAGCTGGACCAGGAGGTAGAAGGGGG...CTCTTTGATAGAATTTTGAGGCCATGCCACCTCCCTTCCAGTCCACATGGAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CCA 90 bp CCATCTCTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAACCCCCTTCTACCTCCTaGTCCAGCTTTGTGATCAGC +
Preference number: 4 (lower is better)
Translates to: PSLPRCNMGWDQCVHVRKPPSTS*SSFVIS
Trigger: GCTGATCACAAAGCTGGACCAGGAGGTAGAAGGGGG...TTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAGAGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CCA 90 bp CAGACTGGTAAGTCCCTTGTAGCCAGTGATTTGCGCTCAGAGGAGGTAATAGGAAGACCTCCCCAGAGCTaGAGAGGTATTTGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: QTGKSLVASDLRSEEVIGRPPQS*RGICVS
Trigger: GGAAACACAAATACCTCTCCAGCTCTGGGGAGGTCT...TCCTATTACCTCCTCTGAGCGCAAATCACTGGCTACAAGGGACTTACCAGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CCA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTCAGGAGGCGTGGTACTaGTCATCTTCTCCGCATTGG +
Preference number: 4 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPQEAWY*SSSPHW
Trigger: CCAATGCGGAGAAGATGACCAGTACCACGCCTCCTG...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CCA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTACAGATCTTCAACTCTaGCACCTGACGAGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPTDLQL*HLTRPC
Trigger: GCAGGGCCTCGTCAGGTGCCAGAGTTGAAGATCTGT...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CCA 90 bp GGTTTTGGGCTGGTAAACATCATCCCAGATCAGGAAATGCAGTCAGCAGGGAGCGCCTTTGTGCTTTTCTaGTTGGGCTCATCAAATCGG +
Preference number: 4 (lower is better)
Translates to: GFGLVNIIPDQEMQSAGSAFVLF*LGSSNR
Trigger: CCGATTTGATGAGCCCAACCAGAAAAGCACAAAGGC...GCTCCCTGCTGACTGCATTTCCTGATCTGGGATGATGTTTACCAGCCCAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CCA 90 bp AATTCCATGTGGACTGGAAGGGAGGTGGCATGGCCTCAAAATTCTATCAAAGAGGAATTCCATGTGGACTaGAAGGGAGGTGGCATGGCC +
Preference number: 4 (lower is better)
Translates to: NSMWTGREVAWPQNSIKEEFHVD*KGGGMA
Trigger: GGCCATGCCACCTCCCTTCCAGTCCACATGGAATTC...CTCTTTGATAGAATTTTGAGGCCATGCCACCTCCCTTCCAGTCCACATGGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CCA 90 bp CCCGGTCTGGAAGGAGCATTGTCAGACGAGTTTGAAGAGGTGGAAACCACAGAGGCTCCACCATCAATATaGAAGAACTTGTCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: PGLEGALSDEFEEVETTEAPPSI*KNLSRL
Trigger: AAGCCTGGACAAGTTCTTCCATATTGATGGTGGAGC...CTCTGTGGTTTCCACCTCTTCAAACTCGTCTGACAATGCTCCTTCCAGACCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CCA 90 bp GGTTTTGGGCTGGTAAACATCATCCCAGATCAGGAAATGCAGTCAGCAGGGAGCAGATGCAATATGGGATaGGATCAGTGTGTCCACGTG +
Preference number: 4 (lower is better)
Translates to: GFGLVNIIPDQEMQSAGSRCNMG*DQCVHV
Trigger: CACGTGGACACACTGATCCCATCCCATATTGCATCT...GCTCCCTGCTGACTGCATTTCCTGATCTGGGATGATGTTTACCAGCCCAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CCA 90 bp GGTTTTGGGCTGGTAAACATCATCCCAGATCAGGAAATGCAGTCAGCAGGGAGCCAAGAAGATGGGAGTTaGGTGGACTCAAGAACTCAG +
Preference number: 4 (lower is better)
Translates to: GFGLVNIIPDQEMQSAGSQEDGS*VDSRTQ
Trigger: CTGAGTTCTTGAGTCCACCCAACTCCCATCTTCTTG...GCTCCCTGCTGACTGCATTTCCTGATCTGGGATGATGTTTACCAGCCCAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CCA 90 bp AATTCCATGTGGACTGGAAGGGAGGTGGCATGGCCTCAAAATTCTATCAAAGAGACTGCAGACCAGCCTTaGCTAGATCCTAGGCGTCAG +
Preference number: 4 (lower is better)
Translates to: NSMWTGREVAWPQNSIKETADQP*LDPRRQ
Trigger: CTGACGCCTAGGATCTAGCCAAGGCTGGTCTGCAGT...CTCTTTGATAGAATTTTGAGGCCATGCCACCTCCCTTCCAGTCCACATGGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR CAA 72 bp AGTGCTGATGTAGTGGCTATAGTGGCTGTCGTCCATTaGCTGCAGCAGGGCAATCATGCAAGCCACAAAACT +
Preference number: 4 (lower is better)
Translates to: SADVVAIVAVVH*LQQGNHASHKT
Trigger: AGTTTTGTGGCTTGCATGATTGCCCTGCTGCAGCAAATGGACGACAGCCACTATAGCCACTACATCAGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR TCA 90 bp CCACACCCCTTCCAGAATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACATACATCTCCAGGATGTaGACTGTGTCACCGATCTGC +
Preference number: 4 (lower is better)
Translates to: PHPFQNLHTHFLSNALDTYISRM*TVSPIC
Trigger: GCAGATCGGTGACACAGTTCACATCCTGGAGATGTA...TGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATTCTGGAAGGGGTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp ATGGGCATGTGGGAACTTTCTGGGGTGCTGAAAACAGTGTATGTCTCTATCTTAAGAGCTTTCGCCAGATaGCAGCCCATTCTCGCAGAG +
Preference number: 4 (lower is better)
Translates to: MGMWELSGVLKTVYVSILRAFAR*QPILAE
Trigger: CTCTGCGAGAATGGGCTGTCATCTGGCGAAAGCTCT...TAAGATAGAGACATACACTGTTTTCAGCACCCCAGAAAGTTCCCACATGCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTGCTTTGTGGAGCAGATaGGGGTGGCAATCTGAAAGC +
Preference number: 4 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPALWSR*GWQSES
Trigger: GCTTTCAGATTGCCACCCTCATCTGCTCCACAAAGC...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR TCA 90 bp TTCAGGCAGGAGAGAGCTATTATTTCCATTAAGGTGGAAAGGGAATCATACGGACATCTAACTGGCCGCTaGGCTGGTCTGTCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: FRQERAIISIKVERESYGHLTGR*AGLSAV
Trigger: CACTGCTGACAGACCAGCTCAGCGGCCAGTTAGATG...TCCGTATGATTCCCTTTCCACCTTAATGGAAATAATAGCTCTCTCCTGCCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp AATTCCATGTGGACTGGAAGGGAGGTGGCATGGCCTCAAAATTCTATCAAAGAGCAATCACTGTCCGGTTaGTCCTTCTCAGCAGCCGTT +
Preference number: 4 (lower is better)
Translates to: NSMWTGREVAWPQNSIKEQSLSG*SFSAAV
Trigger: AACGGCTGCTGAGAAGGATCAACCGGACAGTGATTG...CTCTTTGATAGAATTTTGAGGCCATGCCACCTCCCTTCCAGTCCACATGGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR TCA 90 bp CCGTTCCATTATAAGCTGAATGTGCACCGCAGTGGCACCCACATCCTTCCTGTCCATTCTCCAGAGGACTaGTCTCTTCTGTTGAAATCT +
Preference number: 4 (lower is better)
Translates to: PFHYKLNVHRSGTHILPVHSPED*SLLLKS
Trigger: AGATTTCAACAGAAGAGATCAGTCCTCTGGAGAATG...GACAGGAAGGATGTGGGTGCCACTGCGGTGCACATTCAGCTTATAATGGAACGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR TCA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTGCTGAACACAGTTGCTaGTCCTCTCGTTGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPAEHSC*SSRWSA
Trigger: AGCTGACCAACGAGAGGATCAGCAACTGTGTTCAGC...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR TCA 90 bp AGCAGCTGTCTAAGGCACTCGGTGTTGCAGGGAGGGCAAGATCCTTACTGGGATCTACCAAAGTGTACTTaGTATCCATCTCTTCCAAGA +
Preference number: 4 (lower is better)
Translates to: SSCLRHSVLQGGQDPYWDLPKCT*YPSLPR
Trigger: TCTTGGAAGAGATGGATATCAAGTACACTTTGGTAG...ATCCCAGTAAGGATCTTGCCCTCCCTGCAACACCGAGTGCCTTAGACAGCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR TCA 90 bp ATGGGCATGTGGGAACTTTCTGGGGTGCTGAAAACAGTGTATGTCTCTATCTTAGTGACTGCGACGCAGTaGAGGCCATTAGTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: MGMWELSGVLKTVYVSILVTATQ*RPLVRS
Trigger: ACTCCTGACTAATGGCCTTCACTGCGTCGCAGTCAC...TAAGATAGAGACATACACTGTTTTCAGCACCCCAGAAAGTTCCCACATGCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp ATGGAGGGCCTCAGTAAAGCTCTGCAAGGATCCTTTCACATGCTCCCAGGCTGGCAAAGTACTTACTGCTaGAAGGGAATAAAATGCTGC +
Preference number: 4 (lower is better)
Translates to: MEGLSKALQGSFHMLPGWQSTYC*KGIKCC
Trigger: GCAGCATTTTATTCCCTTTCAGCAGTAAGTACTTTG...CCAGCCTGGGAGCATGTGAAAGGATCCTTGCAGAGCTTTACTGAGGCCCTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR TCA 90 bp GGCTGGTTTGTGGAATTCTCAGTTTGTTCTACTTGTCTGCAGTGGCAGCTGCAAATATTTTGGCATTGCTaGCACAAGGACGGCACCCTC +
Preference number: 4 (lower is better)
Translates to: GWFVEFSVCSTCLQWQLQIFWHC*HKDGTL
Trigger: GAGGGTGCCGTCCTTGTGTCAGCAATGCCAAAATAT...TTGCAGCTGCCACTGCAGACAAGTAGAACAAACTGAGAATTCCACAAACCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR GCA 90 bp CCTGTGCAGGTGCTGGAGCAGGTCATGACGTTCACACCTGCACTTCTTCAGAGTAAGGTCTGTAAACACTaGTTGGAGGTTATTGAGCTT +
Preference number: 4 (lower is better)
Translates to: PVQVLEQVMTFTPALLQSKVCKH*LEVIEL
Trigger: AAGCTCAATAACCTCCAAGCAGTGTTTACAGACCTT...ACTCTGAAGAAGTGCAGGTGTGAACGTCATGACCTGCTCCAGCACCTGCACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR GCA 90 bp ATGGGCATGTGGGAACTTTCTGGGGTGCTGAAAACAGTGTATGTCTCTATCTTAGAAGACAACCGCTCATaGAGCGGCTTCAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: MGMWELSGVLKTVYVSILEDNRS*SGFSCS
Trigger: AGAGCAGCTGAAGCCGCTGCATGAGCGGTTGTCTTC...TAAGATAGAGACATACACTGTTTTCAGCACCCCAGAAAGTTCCCACATGCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp TTCAGGCAGGAGAGAGCTATTATTTCCATTAAGGTGGAAAGGGAATCATACGGAGACCCCGTGCGGCTTTaGTTCCTCTCCGTCAAGTTG +
Preference number: 4 (lower is better)
Translates to: FRQERAIISIKVERESYGDPVRL*FLSVKL
Trigger: CAACTTGACGGAGAGGAAGCAAAGCCGCACGGGGTC...TCCGTATGATTCCCTTTCCACCTTAATGGAAATAATAGCTCTCTCCTGCCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp CAACTGCCAAATGGAAGTAATTGTTCCAGAGCTGAAGTTCAAAGCTTGCCTGATAGGTGGAGGGGGTGGTaGTTTGGCTTCTCTTCGGAC +
Preference number: 4 (lower is better)
Translates to: QLPNGSNCSRAEVQSLPDRWRGW*FGFSSD
Trigger: GTCCGAAGAGAAGCCAAAGCACCACCCCCTCCACCT...ATCAGGCAAGCTTTGAACTTCAGCTCTGGAACAATTACTTCCATTTGGCAGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR GCA 90 bp AATTCCATGTGGACTGGAAGGGAGGTGGCATGGCCTCAAAATTCTATCAAAGAGACTTGTCCAGGCTTGTaGAGACCACCATGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: NSMWTGREVAWPQNSIKETCPGL*RPPCLC
Trigger: GCAGAGACATGGTGGTCTGCACAAGCCTGGACAAGT...CTCTTTGATAGAATTTTGAGGCCATGCCACCTCCCTTCCAGTCCACATGGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CCA 90 bp TCAAAGCCAACAACAATGGCACTATTAGCTAGACTGATTTTTATATACACAAGGTCCGCCAAACTTCGCTaGACTCCGCGGGCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: SKPTTMALLARLIFIYTRSAKLR*TPRAAS
Trigger: GGAGGCGGCCCGCGGAGTCCAGCGAAGTTTGGCGGA...CCTTGTGTATATAAAAATCAGTCTAGCTAATAGTGCCATTGTTGTTGGCTTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410074.5
CDS-3UTR CCA 90 bp ATGGGCATGTGGGAACTTTCTGGGGTGCTGAAAACAGTGTATGTCTCTATCTTATTGGAGGCCACCTCATaGGCCTTGAAGAGGGCAATG +
Preference number: 4 (lower is better)
Translates to: MGMWELSGVLKTVYVSILLEATS*ALKRAM
Trigger: CATTGCCCTCTTCAAGGCCCATGAGGTGGCCTCCAA...TAAGATAGAGACATACACTGTTTTCAGCACCCCAGAAAGTTCCCACATGCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp CCATCTCTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACTGAAGATGGACTaGCCCCGCAAATCGAGGTTC +
Preference number: 4 (lower is better)
Translates to: PSLPRCNMGWDQCVHVRKVLKMD*PRKSRF
Trigger: GAACCTCGATTTGCGGGGCCAGTCCATCTTCAGTAC...TTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAGAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp CAGACTGGTAAGTCCCTTGTAGCCAGTGATTTGCGCTCAGAGGAGGTAATAGGAAAAAGTGGACTGGTCTaGGTCGTAGAGGGCCATAAA +
Preference number: 4 (lower is better)
Translates to: QTGKSLVASDLRSEEVIGKSGLV*VVEGHK
Trigger: TTTATGGCCCTCTACGACCCAGACCAGTCCACTTTT...TCCTATTACCTCCTCTGAGCGCAAATCACTGGCTACAAGGGACTTACCAGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp AGAGAGGGACCGGTCCCAGGCATGCTGCTGAACACAGTTGCTGATCCTCTCGTTTTGTGTTTAATGTTCTaGGAGTTGGAACGCCAATTT +
Preference number: 4 (lower is better)
Translates to: REGPVPGMLLNTVADPLVLCLMF*ELERQF
Trigger: AAATTGGCGTTCCAACTCCCAGAACATTAAACACAA...AACGAGAGGATCAGCAACTGTGTTCAGCAGCATGCCTGGGACCGGTCCCTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CCA 90 bp CCTGTTACCGCCTTGTTCAGTTTGAGCTGCATATTGGCCAATCAAAGTTTATATAACTGGCCGCTGAGCTaGTCTGTCAGCAGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: PVTALFSLSCILANQSLYNWPLS*SVSSGS
Trigger: GCTGCCACTGCTGACAGACCAGCTCAGCGGCCAGTT...ATATAAACTTTGATTGGCCAATATGCAGCTCAAACTGAACAAGGCGGTAACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CCA 90 bp AGAAGGTATCCAGACAGTGATGTATCCTATCTTCCCAGCCTCTGCTCAAAGACCCGTGGTCAGGCTTGTTaGAGTTGTCATCTAACTGGC +
Preference number: 4 (lower is better)
Translates to: RRYPDSDVSYLPSLCSKTRGQAC*SCHLTG
Trigger: GCCAGTTAGATGACAACTCCAACAAGCCTGACCACG...GGTCTTTGAGCAGAGGCTGGGAAGATAGGATACATCACTGTCTGGATACCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp CCACACCCCTTCCAGAATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACAAGACCTCCCCAGAGCTaGAGAGGTATTTGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: PHPFQNLHTHFLSNALDTRPPQS*RGICVS
Trigger: GGAAACACAAATACCTCTCCAGCTCTGGGGAGGTCT...TGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATTCTGGAAGGGGTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp AATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACATCTGAGAGCTTTTGCCTTCCCCAGGAGGCGTaGTACTGGTCATCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: NLHTHFLSNALDTSESFCLPQEA*YWSSSP
Trigger: CGGAGAAGATGACCAGTACCACGCCTCCTGGGGAAG...GCAAAAGCTCTCAGATGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp AATTCCATGTGGACTGGAAGGGAGGTGGCATGGCCTCAAAATTCTATCAAAGAGCATCAGATCCCGGTCTaGAAGGAGCATTGTCAGACG +
Preference number: 4 (lower is better)
Translates to: NSMWTGREVAWPQNSIKEHQIPV*KEHCQT
Trigger: CGTCTGACAATGCTCCTTCCAGACCGGGATCTGATG...CTCTTTGATAGAATTTTGAGGCCATGCCACCTCCCTTCCAGTCCACATGGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CCA 90 bp CCCGGTCTGGAAGGAGCATTGTCAGACGAGTTTGAAGAGGTGGAAACCACAGAGCGATTATCCATCAACTaGAGACTCTTTGGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: PGLEGALSDEFEEVETTERLSIN*RLFGLC
Trigger: ACAAAGGCCAAAGAGTCTCCAGTTGATGGATAATCG...CTCTGTGGTTTCCACCTCTTCAAACTCGTCTGACAATGCTCCTTCCAGACCGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CCA 90 bp TTCAGGCAGGAGAGAGCTATTATTTCCATTAAGGTGGAAAGGGAATCATACGGATGGAGGTGGAGGGGGTaGTGCTTTGGCTTCTCTTCG +
Preference number: 4 (lower is better)
Translates to: FRQERAIISIKVERESYGWRWRG*CFGFSS
Trigger: CGAAGAGAAGCCAAAGCACCACCCCCTCCACCTCCA...TCCGTATGATTCCCTTTCCACCTTAATGGAAATAATAGCTCTCTCCTGCCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp GGTTTTGGGCTGGTAAACATCATCCCAGATCAGGAAATGCAGTCAGCAGGGAGCGGAAGGGAGGTGGCATaGCCTCAAAATTCTATCAAA +
Preference number: 4 (lower is better)
Translates to: GFGLVNIIPDQEMQSAGSGREVA*PQNSIK
Trigger: TTTGATAGAATTTTGAGGCCATGCCACCTCCCTTCC...GCTCCCTGCTGACTGCATTTCCTGATCTGGGATGATGTTTACCAGCCCAAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
3UTR CAA 72 bp TGGGACTTGCTCAGACTCCAGTCTTTTCTCTTAAACTaGCTGATCCGGTTCTCGCTGTTCTCCTCTCTAAGG +
Preference number: 4 (lower is better)
Translates to: WDLLRLQSFLLN*LIRFSLFSSLR
Trigger: CCTTAGAGAGGAGAACAGCGAGAACCGGATCAGCAAGTTTAAGAGAAAAGACTGGAGTCTGAGCAAGTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR TCA 90 bp AATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACATCTGAGAGCTTTTGCGCTGGCGGAAGAGGGTaGGCTTGTTGTTCACGTAGA +
Preference number: 4 (lower is better)
Translates to: NLHTHFLSNALDTSESFCAGGRG*ACCSRR
Trigger: TCTACGTGAACAACAAGCTCACCCTCTTCCGCCAGC...GCAAAAGCTCTCAGATGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp CTGAGTTTCCCAAATGAAAAGACCTACAGTTACAGACACTGGGGATTTCTTTCTAGGTGTGGATGGTACTaGAGATGGACTGGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: LSFPNEKTYSYRHWGFLSRCGWY*RWTGPA
Trigger: TGCGGGGCCAGTCCATCTTCAGTACCATCCACACCT...AGAAAGAAATCCCCAGTGTCTGTAACTGTAGGTCTTTTCATTTGGGAAACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR TCA 90 bp AGAAGGTATCCAGACAGTGATGTATCCTATCTTCCCAGCCTCTGCTCAAAGACCCTCCCCAATCACGTGTaGTGTTATCAAAGGCGACAT +
Preference number: 4 (lower is better)
Translates to: RRYPDSDVSYLPSLCSKTLPNHV*CYQRRH
Trigger: ATGTCGCCTTTGATAACATCACACGTGATTGGGGAG...GGTCTTTGAGCAGAGGCTGGGAAGATAGGATACATCACTGTCTGGATACCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp ATTTGCTGCAGCAGGGCAATCATGCAAGCCACAAAACTCCCGATGTGGGGAGACTGTCCATCAGCATATTaGAAGCAAGAAATAACTGGC +
Preference number: 4 (lower is better)
Translates to: ICCSRAIMQATKLPMWGDCPSAY*KQEITG
Trigger: GCCAGTTATTTCTTGCTTTCAATATGCTGATGGACA...GTCTCCCCACATCGGGAGTTTTGTGGCTTGCATGATTGCCCTGCTGCAGCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR TCA 90 bp CCTGTTACCGCCTTGTTCAGTTTGAGCTGCATATTGGCCAATCAAAGTTTATATCATCTAACTGGCCGCTaGGCTGGTCTGTCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: PVTALFSLSCILANQSLYHLTGR*AGLSAV
Trigger: CACTGCTGACAGACCAGCTCAGCGGCCAGTTAGATG...ATATAAACTTTGATTGGCCAATATGCAGCTCAAACTGAACAAGGCGGTAACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR TCA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTCGTTCCATTATAAGCTaGATGTGCACCGCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPRSIIS*MCTAVA
Trigger: TGCCACTGCGGTGCACATTCAGCTTATAATGGAACG...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR TCA 90 bp CCACACCCCTTCCAGAATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACAGAAGGGACTCATGGGTaGGAAATGCAACTGCCAAAT +
Preference number: 4 (lower is better)
Translates to: PHPFQNLHTHFLSNALDTEGTHG*EMQLPN
Trigger: ATTTGGCAGTTGCATTTCTCACCCATGAGTCCCTTC...TGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATTCTGGAAGGGGTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp ATGCAAGACTTATATGCAGAAAACTTTCACACGCCATTGAAGGGCACAAAAGCACTTCAGGGGTCAGAGTaGCCTCCAGAATGGGACCCA +
Preference number: 4 (lower is better)
Translates to: MQDLYAENFHTPLKGTKALQGSE*PPEWDP
Trigger: TGGGTCCCATTCTGGAGGTCACTCTGACCCCTGAAG...TGCTTTTGTGCCCTTCAATGGCGTGTGAAAGTTTTCTGCATATAAGTCTTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR TCA 90 bp TTCAGGCAGGAGAGAGCTATTATTTCCATTAAGGTGGAAAGGGAATCATACGGACACAGAGGAAGTGACTaGGGTGATGGACAACCTCCG +
Preference number: 4 (lower is better)
Translates to: FRQERAIISIKVERESYGHRGSD*GDGQPP
Trigger: CGGAGGTTGTCCATCACCTCAGTCACTTCCTCTGTG...TCCGTATGATTCCCTTTCCACCTTAATGGAAATAATAGCTCTCTCCTGCCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp CCACACCCCTTCCAGAATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACACTCTGCCGTACAGGCTaGCATTTAACAATGGTGAAG +
Preference number: 4 (lower is better)
Translates to: PHPFQNLHTHFLSNALDTLCRTG*HLTMVK
Trigger: CTTCACCATTGTTAAATGTCAGCCTGTACGGCAGAG...TGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATTCTGGAAGGGGTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp AATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACATCTGAGAGCTTTTGCAGTTTCCCCCAGTGCTaGCCTCTGCCTTCACAGTCA +
Preference number: 4 (lower is better)
Translates to: NLHTHFLSNALDTSESFCSFPQC*PLPSQS
Trigger: TGACTGTGAAGGCAGAGGTCAGCACTGGGGGAAACT...GCAAAAGCTCTCAGATGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp CAGACTGGTAAGTCCCTTGTAGCCAGTGATTTGCGCTCAGAGGAGGTAATAGGAGAATTCTGTCAAATGTaGCTCTTCCTACCCAACACC +
Preference number: 4 (lower is better)
Translates to: QTGKSLVASDLRSEEVIGEFCQM*LFLPNT
Trigger: GGTGTTGGGTAGGAAGAGTCACATTTGACAGAATTC...TCCTATTACCTCCTCTGAGCGCAAATCACTGGCTACAAGGGACTTACCAGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp ATGCAAGACTTATATGCAGAAAACTTTCACACGCCATTGAAGGGCACAAAAGCAACTCCTGACCCCAAGTaGTCTGCTGGCCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: MQDLYAENFHTPLKGTKATPDPK*SAGLSF
Trigger: GAAGCTGAGGCCAGCAGATCACTTGGGGTCAGGAGT...TGCTTTTGTGCCCTTCAATGGCGTGTGAAAGTTTTCTGCATATAAGTCTTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR TCA 90 bp CCTGTGCAGGTGCTGGAGCAGGTCATGACGTTCACACCTGCACTTCTTCAGAGTCAACATCAAGGACTTTaGATAAAGTCTTCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: PVQVLEQVMTFTPALLQSQHQGL*IKSSVQ
Trigger: CTGAACAGAAGACTTTATTCAAAGTCCTTGATGTTG...ACTCTGAAGAAGTGCAGGTGTGAACGTCATGACCTGCTCCAGCACCTGCACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR GCA 90 bp TCTCAAAGCCTGCTTTATATCTTGTTCTACATTAGGAAATTGCAGTGTGGCTGCGCAACCCCGTACTTCTaGCTCTTGGTCGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: SQSLLYILFYIRKLQCGCATPYF*LLVGIQ
Trigger: CTGGATCCCGACCAAGAGGCAGAAGTACGGGGTTGC...GCAGCCACACTGCAATTTCCTAATGTAGAACAAGATATAAAGCAGGCTTTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp TCTCAAAGCCTGCTTTATATCTTGTTCTACATTAGGAAATTGCAGTGTGGCTGCAGGCTGTACGTCATCTaGTGCAGCTGGCGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: SQSLLYILFYIRKLQCGCRLYVI*CSWRKR
Trigger: CCTCTTCCGCCAGCTGCAGCAGATGACGTACAGCCT...GCAGCCACACTGCAATTTCCTAATGTAGAACAAGATATAAAGCAGGCTTTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp GGCTGGTTTGTGGAATTCTCAGTTTGTTCTACTTGTCTGCAGTGGCAGCTGCAAGGCCATAAACAACTCTaGATCTTCCCCGATGTTGCA +
Preference number: 4 (lower is better)
Translates to: GWFVEFSVCSTCLQWQLQGHKQL*IFPDVA
Trigger: TGCAACATCGGGGAAGATGCAGAGTTGTTTATGGCC...TTGCAGCTGCCACTGCAGACAAGTAGAACAAACTGAGAATTCCACAAACCAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR GCA 90 bp CTTCTGTTCAGCTCCTATCTGACAATCTTGCAGCTTAGAATCTTTCCTTCTCTGCGGAGTCCACAGGTGTaGTTCTTGCCTTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LLFSSYLTILQLRIFPSLRSPQV*FLPSFS
Trigger: GCTGAAGGAAGGCAAGAAGCACACCTGTGGACTCCG...CAGAGAAGGAAAGATTCTAAGCTGCAAGATTGTCAGATAGGAGCTGAACAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR GCA 90 bp CCATCTCTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAAAGGTACTTCAAAGCTaGCCCCTTGATCTTGACGGC +
Preference number: 4 (lower is better)
Translates to: PSLPRCNMGWDQCVHVRKKVLQS*PLDLDG
Trigger: GCCGTCAAGATCAAGGGGGCAGCTTTGAAGTACCTT...TTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAGAGATGG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR GCA 90 bp CCCGGTCTGGAAGGAGCATTGTCAGACGAGTTTGAAGAGGTGGAAACCACAGAGACTGTCGAAAAAGAGTaGTCTCTACTATCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: PGLEGALSDEFEEVETTETVEKE*SLLSWS
Trigger: TGACCAAGATAGTAGAGAGCACTCTTTTTCGACAGT...CTCTGTGGTTTCCACCTCTTCAAACTCGTCTGACAATGCTCCTTCCAGACCGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR GCA 90 bp CCACACCCCTTCCAGAATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACAGCAGCAGCACTTCTCTaGACTCTGACTGTCGAAAAA +
Preference number: 4 (lower is better)
Translates to: PHPFQNLHTHFLSNALDTAAALL*TLTVEK
Trigger: TTTTTCGACAGTCAGAGTGCAGAGAAGTGCTGCTGC...TGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATTCTGGAAGGGGTGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp AGTTACAGACACTGGGGATTTCTTTCTGATCATACAATGGCGAAATCCACAGTCCCGATGTGGGGAGACTaGCGGTTCATCCCAATCACT +
Preference number: 4 (lower is better)
Translates to: SYRHWGFLSDHTMAKSTVPMWGD*RFIPIT
Trigger: AGTGATTGGGATGAACCGGCAGTCTCCCCACATCGG...GACTGTGGATTTCGCCATTGTATGATCAGAAAGAAATCCCCAGTGTCTGTAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR GCA 90 bp CCATCTCTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAACTGTCGTCCATTTGCTaGAGCAGGGCAATCATGCAA +
Preference number: 4 (lower is better)
Translates to: PSLPRCNMGWDQCVHVRKLSSIC*SRAIMQ
Trigger: TTGCATGATTGCCCTGCTGCAGCAAATGGACGACAG...TTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAGAGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR GCA 90 bp ATGGGCATGTGGGAACTTTCTGGGGTGCTGAAAACAGTGTATGTCTCTATCTTATGGCTGTCGTCCATTTaGTGCAGCAGGGCAATCATG +
Preference number: 4 (lower is better)
Translates to: MGMWELSGVLKTVYVSILWLSSI*CSRAIM
Trigger: CATGATTGCCCTGCTGCAGCAAATGGACGACAGCCA...TAAGATAGAGACATACACTGTTTTCAGCACCCCAGAAAGTTCCCACATGCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp CCATCTCTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAACGGGAGTATCTGAACTaGTGCACTTCATTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: PSLPRCNMGWDQCVHVRKREYLN*CTSLAL
Trigger: CAGAGCCAATGAAGTGCAGCAGTTCAGATACTCCCG...TTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAGAGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR GCA 90 bp TCTGGTTTTGAAAGTGCTGATGTAGTGGCTATAGTGGCTGTCGTCCATTTGCTGCGGGAGTATCTGAACTaGTGCACTTCATTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: SGFESADVVAIVAVVHLLREYLN*CTSLAL
Trigger: CAGAGCCAATGAAGTGCAGCAGTTCAGATACTCCCG...CAGCAAATGGACGACAGCCACTATAGCCACTACATCAGCACTTTCAAAACCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR GCA 90 bp CCATCTCTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTTTCTCCCCATGGATaGGGATCCCTTCTGTTAGCA +
Preference number: 4 (lower is better)
Translates to: PSLPRCNMGWDQCVHVRKVSPHG*GSLLLA
Trigger: TGCTAACAGAAGGGATCCGCATCCATGGGGAGAAAC...TTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAGAGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR GCA 90 bp AGAAGGTATCCAGACAGTGATGTATCCTATCTTCCCAGCCTCTGCTCAAAGACCCAAATCGGGTTCTGGTaGTTTCTCTGCAATGACCTG +
Preference number: 4 (lower is better)
Translates to: RRYPDSDVSYLPSLCSKTQIGFW*FLCNDL
Trigger: CAGGTCATTGCAGAGAAAGCACCAGAACCCGATTTG...GGTCTTTGAGCAGAGGCTGGGAAGATAGGATACATCACTGTCTGGATACCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTAGGGCAGCTTTCCTGTaGCACAAGAAGATGGGAGTT +
Preference number: 4 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPRAAFL*HKKMGV
Trigger: AACTCCCATCTTCTTGTGGCACAGGAAAGCTGCCCT...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR GCA 90 bp CCATCTCTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAAGGGCAGCTTTCCTGTaGCACAAGAAGATGGGAGTT +
Preference number: 4 (lower is better)
Translates to: PSLPRCNMGWDQCVHVRKRAAFL*HKKMGV
Trigger: AACTCCCATCTTCTTGTGGCACAGGAAAGCTGCCCT...TTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAGAGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR GCA 90 bp CAGACTGGTAAGTCCCTTGTAGCCAGTGATTTGCGCTCAGAGGAGGTAATAGGAGAGAAGGGCTGTATGTaGAGAACTAACTTGCACTCA +
Preference number: 4 (lower is better)
Translates to: QTGKSLVASDLRSEEVIGEKGCM*RTNLHS
Trigger: TGAGTGCAAGTTAGTTCTGCACATACAGCCCTTCTC...TCCTATTACCTCCTCTGAGCGCAAATCACTGGCTACAAGGGACTTACCAGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp CAGACTGGTAAGTCCCTTGTAGCCAGTGATTTGCGCTCAGAGGAGGTAATAGGAACATATCCTGTCTGTTaGCTCCTCCTTTCTCTACAG +
Preference number: 4 (lower is better)
Translates to: QTGKSLVASDLRSEEVIGTYPVC*LLLSLQ
Trigger: CTGTAGAGAAAGGAGGAGGCAACAGACAGGATATGT...TCCTATTACCTCCTCTGAGCGCAAATCACTGGCTACAAGGGACTTACCAGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp GCTTGTCAGACCACTGCAGAAGCTCAGCGTGCAAGAGAAGCGTGTAGGCAGCTTATATCCTACAAGAGCTaGGGTTTATTGGAGAAGTTA +
Preference number: 4 (lower is better)
Translates to: ACQTTAEAQRAREACRQLISYKS*GLLEKL
Trigger: TAACTTCTCCAATAAACCGCAGCTCTTGTAGGATAT...AAGCTGCCTACACGCTTCTCTTGCACGCTGAGCTTCTGCAGTGGTCTGACAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CCA 90 bp ATGGGCATGTGGGAACTTTCTGGGGTGCTGAAAACAGTGTATGTCTCTATCTTAAGAGGGCAATGGTGCTaGTTTCGTCAGGGTCTAGGA +
Preference number: 4 (lower is better)
Translates to: MGMWELSGVLKTVYVSILRGQWC*FRQGLG
Trigger: TCCTAGACCCTGACGAAACCAGCACCATTGCCCTCT...TAAGATAGAGACATACACTGTTTTCAGCACCCCAGAAAGTTCCCACATGCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp AGTTACAGACACTGGGGATTTCTTTCTGATCATACAATGGCGAAATCCACAGTCTCCCATCCTGCAGAGTaGTGCCATCCGGGTTCATCA +
Preference number: 4 (lower is better)
Translates to: SYRHWGFLSDHTMAKSTVSHPAE*CHPGSS
Trigger: TGATGAACCCGGATGGCACCACTCTGCAGGATGGGA...GACTGTGGATTTCGCCATTGTATGATCAGAAAGAAATCCCCAGTGTCTGTAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CCA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTAGTGCTATCCTTGCTTaGGGTGAAGGTGACCAGGTT +
Preference number: 4 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPSAILA*GEGDQV
Trigger: AACCTGGTCACCTTCACCCCAAGCAAGGATAGCACT...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CCA 90 bp CTTTGTGCTTTTCTGGTTGGGCTCATCAAATCGGGTTCTGGTGCTTTCTCTGCAAACAGGTCAACATTCTaGGTGAGCTTTGTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: LCAFLVGLIKSGSGAFSANRSTF*VSFVEQ
Trigger: CTGCTCCACAAAGCTCACCCAGAATGTTGACCTGTT...TGCAGAGAAAGCACCAGAACCCGATTTGATGAGCCCAACCAGAAAAGCACAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CCA 90 bp AGTTACAGACACTGGGGATTTCTTTCTGATCATACAATGGCGAAATCCACAGTCTGCGAGCTTGCCTCGTaGTCAGGCTTGTTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: SYRHWGFLSDHTMAKSTVCELAS*SGLLEL
Trigger: CAACTCCAACAAGCCTGACCACGAGGCAAGCTCGCA...GACTGTGGATTTCGCCATTGTATGATCAGAAAGAAATCCCCAGTGTCTGTAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CCA 90 bp TTCAGGCAGGAGAGAGCTATTATTTCCATTAAGGTGGAAAGGGAATCATACGGAGAATGTGCACCGCAGTaGCACCCACATCCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: FRQERAIISIKVERESYGECAPQ*HPHPSC
Trigger: ACAGGAAGGATGTGGGTGCCACTGCGGTGCACATTC...TCCGTATGATTCCCTTTCCACCTTAATGGAAATAATAGCTCTCTCCTGCCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp AGCACGGAGAAAAACCCTGTTTTGAGTCATATTCATCACCATCCAATCTTTGGCGAATGTGCACCGCAGTaGCACCCACATCCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: STEKNPVLSHIHHHPIFGECAPQ*HPHPSC
Trigger: ACAGGAAGGATGTGGGTGCCACTGCGGTGCACATTC...GCCAAAGATTGGATGGTGATGAATATGACTCAAAACAGGGTTTTTCTCCGTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CCA 90 bp AGCACGGAGAAAAACCCTGTTTTGAGTCATATTCATCACCATCCAATCTTTGGCCAGGAGGCGTGGTACTaGTCATCTTCTCCGCATTGG +
Preference number: 4 (lower is better)
Translates to: STEKNPVLSHIHHHPIFGQEAWY*SSSPHW
Trigger: CCAATGCGGAGAAGATGACCAGTACCACGCCTCCTG...GCCAAAGATTGGATGGTGATGAATATGACTCAAAACAGGGTTTTTCTCCGTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CCA 90 bp CCATCTCTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTTTATCCTTGTAGCTaGGCGGCAAGCTCATCACTG +
Preference number: 4 (lower is better)
Translates to: PSLPRCNMGWDQCVHVRKVYPCS*AASSSL
Trigger: CAGTGATGAGCTTGCCGCCCAGCTACAAGGATAAAC...TTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAGAGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CCA 90 bp TCTCAAAGCCTGCTTTATATCTTGTTCTACATTAGGAAATTGCAGTGTGGCTGCGGCTTTGGGAGTGAGTaGAGGTGGGCTCAAGGGTGT +
Preference number: 4 (lower is better)
Translates to: SQSLLYILFYIRKLQCGCGFGSE*RWAQGC
Trigger: ACACCCTTGAGCCCACCTCCACTCACTCCCAAAGCC...GCAGCCACACTGCAATTTCCTAATGTAGAACAAGATATAAAGCAGGCTTTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp ATGGGCATGTGGGAACTTTCTGGGGTGCTGAAAACAGTGTATGTCTCTATCTTAGGGCAAGATCCTTACTaGGATCCAGGCTCGGAAGTA +
Preference number: 4 (lower is better)
Translates to: MGMWELSGVLKTVYVSILGQDPY*DPGSEV
Trigger: TACTTCCGAGCCTGGATCCCAGTAAGGATCTTGCCC...TAAGATAGAGACATACACTGTTTTCAGCACCCCAGAAAGTTCCCACATGCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTATCAGAGGGTTAAGGTaGAGGAGGAGGAAGCAACTC +
Preference number: 4 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPIRGLR*RRRKQL
Trigger: GAGTTGCTTCCTCCTCCTCCACCTTAACCCTCTGAT...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp AATTCCATGTGGACTGGAAGGGAGGTGGCATGGCCTCAAAATTCTATCAAAGAGTTAATAGCCAGGGTATaGCAGGGTCAAAGCACCACC +
Preference number: 4 (lower is better)
Translates to: NSMWTGREVAWPQNSIKELIARV*QGQSTT
Trigger: GGTGGTGCTTTGACCCTGCCATACCCTGGCTATTAA...CTCTTTGATAGAATTTTGAGGCCATGCCACCTCCCTTCCAGTCCACATGGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp CACTTCTTCAGAGTGACACGGCTTGAATCTGCTCCCAACAGCTCCTCAATGGCCACTCTGGCTGGTTTGTaGAATTCTCAGTTTGTTCTA +
Preference number: 4 (lower is better)
Translates to: HFFRVTRLESAPNSSSMATLAGL*NSQFVL
Trigger: TAGAACAAACTGAGAATTCCACAAACCAGCCAGAGT...GGCCATTGAGGAGCTGTTGGGAGCAGATTCAAGCCGTGTCACTCTGAAGAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR TCA 90 bp TCCTGGGGGAACCCTATCTATCTACTGTTCAAAGCCAACAACAATGGCACTATTTACATCTCCAGGATGTaGACTGTGTCACCGATCTGC +
Preference number: 4 (lower is better)
Translates to: SWGNPIYLLFKANNNGTIYISRM*TVSPIC
Trigger: GCAGATCGGTGACACAGTTCACATCCTGGAGATGTA...AATAGTGCCATTGTTGTTGGCTTTGAACAGTAGATAGATAGGGTTCCCCCAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410074.5
CDS-3UTR TCA 90 bp CAGACTGGTAAGTCCCTTGTAGCCAGTGATTTGCGCTCAGAGGAGGTAATAGGATCCATCGCAATTTGCTaGAAGGGAATAAAATGCTGC +
Preference number: 4 (lower is better)
Translates to: QTGKSLVASDLRSEEVIGSIAIC*KGIKCC
Trigger: GCAGCATTTTATTCCCTTTCAGCAAATTGCGATGGA...TCCTATTACCTCCTCTGAGCGCAAATCACTGGCTACAAGGGACTTACCAGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp CCATCTCTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAATGTGAAAAATTCTTCTaGACCTGGGTGAGGTCACCG +
Preference number: 4 (lower is better)
Translates to: PSLPRCNMGWDQCVHVRKCEKFF*TWVRSP
Trigger: CGGTGACCTCACCCAGGTTCAGAAGAATTTTTCACA...TTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAGAGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp AATTCCATGTGGACTGGAAGGGAGGTGGCATGGCCTCAAAATTCTATCAAAGAGCATCTCCTGGCAGTATaGTTTCAGGAAAGCCCATCT +
Preference number: 4 (lower is better)
Translates to: NSMWTGREVAWPQNSIKEHLLAV*FQESPS
Trigger: AGATGGGCTTTCCTGAAATCATACTGCCAGGAGATG...CTCTTTGATAGAATTTTGAGGCCATGCCACCTCCCTTCCAGTCCACATGGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTACCAACAGGGCTGCTTaGCTTGGTAATAGACTACTG +
Preference number: 4 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPTNRAA*LGNRLL
Trigger: CAGTAGTCTATTACCAAGTCAAGCAGCCCTGTTGGT...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTTTATCTCTGGTTTCCTaGGATGACCTGTGTCGGAAG +
Preference number: 4 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPLSLVS*DDLCRK
Trigger: CTTCCGACACAGGTCATCTCAGGAAACCAGAGATAA...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp AGTTACAGACACTGGGGATTTCTTTCTGATCATACAATGGCGAAATCCACAGTCGCTTTGTGGAGCAGATaGGGGTGGCAATCTGAAAGC +
Preference number: 4 (lower is better)
Translates to: SYRHWGFLSDHTMAKSTVALWSR*GWQSES
Trigger: GCTTTCAGATTGCCACCCTCATCTGCTCCACAAAGC...GACTGTGGATTTCGCCATTGTATGATCAGAAAGAAATCCCCAGTGTCTGTAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR TCA 90 bp AATTCCATGTGGACTGGAAGGGAGGTGGCATGGCCTCAAAATTCTATCAAAGAGATGCCAAAGTGGCGCTaGAGTGCTTGTAAATGTAGG +
Preference number: 4 (lower is better)
Translates to: NSMWTGREVAWPQNSIKEMPKWR*SACKCR
Trigger: CCTACATTTACAAGCACTTCAGCGCCACTTTGGCAT...CTCTTTGATAGAATTTTGAGGCCATGCCACCTCCCTTCCAGTCCACATGGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR TCA 90 bp ATTTGCTGCAGCAGGGCAATCATGCAAGCCACAAAACTCCCGATGTGGGGAGACAGAAAAACCCTGTTTTaGGTCATATTCATCACCATC +
Preference number: 4 (lower is better)
Translates to: ICCSRAIMQATKLPMWGDRKTLF*VIFITI
Trigger: GATGGTGATGAATATGACTCAAAACAGGGTTTTTCT...GTCTCCCCACATCGGGAGTTTTGTGGCTTGCATGATTGCCCTGCTGCAGCAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR TCA 90 bp CAGACTGGTAAGTCCCTTGTAGCCAGTGATTTGCGCTCAGAGGAGGTAATAGGAAGTTCAAAGCTTGCCTaGTCCATGAAGAATCTTGTG +
Preference number: 4 (lower is better)
Translates to: QTGKSLVASDLRSEEVIGSSKLA*SMKNLV
Trigger: CACAAGATTCTTCATGGATCAGGCAAGCTTTGAACT...TCCTATTACCTCCTCTGAGCGCAAATCACTGGCTACAAGGGACTTACCAGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR TCA 90 bp GACACATTATTTATGAATTCTGTCAAATGTGACTCTTCCTACCCAACACCTTCCTCTCTAAGAGGCTGCTaGCCAGGAGGGCGAAGACCT +
Preference number: 4 (lower is better)
Translates to: DTLFMNSVKCDSSYPTPSSLRGC*PGGRRP
Trigger: AGGTCTTCGCCCTCCTGGTCAGCAGCCTCTTAGAGA...GGAAGGTGTTGGGTAGGAAGAGTCACATTTGACAGAATTCATAAATAATGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp AAAAGAGAGAAATTGAAGATGACTATGAGGTTGCCTGAGCAACTAAATGGATGGTCTCTAAGAGGCTGCTaGCCAGGAGGGCGAAGACCT +
Preference number: 4 (lower is better)
Translates to: KREKLKMTMRLPEQLNGWSLRGC*PGGRRP
Trigger: AGGTCTTCGCCCTCCTGGTCAGCAGCCTCTTAGAGA...CCATCCATTTAGTTGCTCAGGCAACCTCATAGTCATCTTCAATTTCTCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR TCA 90 bp TTCAGGCAGGAGAGAGCTATTATTTCCATTAAGGTGGAAAGGGAATCATACGGAGCTGAACACAGTTGCTaGTCCTCTCGTTGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: FRQERAIISIKVERESYGAEHSC*SSRWSA
Trigger: AGCTGACCAACGAGAGGATCAGCAACTGTGTTCAGC...TCCGTATGATTCCCTTTCCACCTTAATGGAAATAATAGCTCTCTCCTGCCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp TTCAGGCAGGAGAGAGCTATTATTTCCATTAAGGTGGAAAGGGAATCATACGGAGTGCTTTCTCTGCAATaGCCTGGGACTTGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: FRQERAIISIKVERESYGVLSLQ*PGTCSD
Trigger: GTCTGAGCAAGTCCCAGGTCATTGCAGAGAAAGCAC...TCCGTATGATTCCCTTTCCACCTTAATGGAAATAATAGCTCTCTCCTGCCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp TTCAGGCAGGAGAGAGCTATTATTTCCATTAAGGTGGAAAGGGAATCATACGGAGCAGGGACCATCAGGTaGGTACCTCTTCTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: FRQERAIISIKVERESYGAGTIR*VPLLSH
Trigger: ATGGGAAAGAAGAGGTACTCACCTGATGGTCCCTGC...TCCGTATGATTCCCTTTCCACCTTAATGGAAATAATAGCTCTCTCCTGCCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp CAGACTGGTAAGTCCCTTGTAGCCAGTGATTTGCGCTCAGAGGAGGTAATAGGACTTGGCAGAAGAAAATaGCTGCAATTCTGGAATCAG +
Preference number: 4 (lower is better)
Translates to: QTGKSLVASDLRSEEVIGLGRRK*LQFWNQ
Trigger: CTGATTCCAGAATTGCAGTCATTTTCTTCTGCCAAG...TCCTATTACCTCCTCTGAGCGCAAATCACTGGCTACAAGGGACTTACCAGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp TCTCAAAGCCTGCTTTATATCTTGTTCTACATTAGGAAATTGCAGTGTGGCTGCAGTGGGCCAGGCTGGTaGAGCCTTAGACTACTATGG +
Preference number: 4 (lower is better)
Translates to: SQSLLYILFYIRKLQCGCSGPGW*SLRLLW
Trigger: CCATAGTAGTCTAAGGCTTCACCAGCCTGGCCCACT...GCAGCCACACTGCAATTTCCTAATGTAGAACAAGATATAAAGCAGGCTTTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTTTTCTTCTTGAGCTCTaGCAGTTCATCCTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPFLLEL*QFILGE
Trigger: CTCCCCAAGGATGAACTGGCAGAGCTCAAGAAGAAA...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp AGAAGGTATCCAGACAGTGATGTATCCTATCTTCCCAGCCTCTGCTCAAAGACCCGCAAATCGAGGTTCTaGAGGATTGACTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: RRYPDSDVSYLPSLCSKTRKSRF*RIDFSS
Trigger: AGAAGAGAAGTCAATCCTGCAGAACCTCGATTTGCG...GGTCTTTGAGCAGAGGCTGGGAAGATAGGATACATCACTGTCTGGATACCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp ATGCAAGACTTATATGCAGAAAACTTTCACACGCCATTGAAGGGCACAAAAGCACATCCTGCAGAGTGGTaGCATCCGGGTTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: MQDLYAENFHTPLKGTKAHPAEW*HPGSSA
Trigger: AGCTGATGAACCCGGATGGCACCACTCTGCAGGATG...TGCTTTTGTGCCCTTCAATGGCGTGTGAAAGTTTTCTGCATATAAGTCTTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR GCA 90 bp GGTTTTGGGCTGGTAAACATCATCCCAGATCAGGAAATGCAGTCAGCAGGGAGCGACCAGGTTTTTGGATaGTTGAAGCTCTTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: GFGLVNIIPDQEMQSAGSDQVFG*LKLFFF
Trigger: GAAGAAAAAGAGCTTCAAGCATCCAAAAACCTGGTC...GCTCCCTGCTGACTGCATTTCCTGATCTGGGATGATGTTTACCAGCCCAAAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR GCA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTGGAGAGTTTCACATATaGCAAAGTGGCGCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPGEFHI*QSGAEV
Trigger: CACTTCAGCGCCACTTTGGCATATGTGAAACTCTCC...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp CTGAGTTTCCCAAATGAAAAGACCTACAGTTACAGACACTGGGGATTTCTTTCTCAGAAGCTGCGAGCTTaGCTCGTGGTCAGGCTTGTT +
Preference number: 4 (lower is better)
Translates to: LSFPNEKTYSYRHWGFLSQKLRA*LVVRLV
Trigger: AACAAGCCTGACCACGAGGCAAGCTCGCAGCTTCTG...AGAAAGAAATCCCCAGTGTCTGTAACTGTAGGTCTTTTCATTTGGGAAACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR GCA 90 bp AGCACGGAGAAAAACCCTGTTTTGAGTCATATTCATCACCATCCAATCTTTGGCATGTTGCTCAGAAGCTaGGAGCTTGCCTCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: STEKNPVLSHIHHHPIFGMLLRS*ELASWS
Trigger: TGACCACGAGGCAAGCTCGCAGCTTCTGAGCAACAT...GCCAAAGATTGGATGGTGATGAATATGACTCAAAACAGGGTTTTTCTCCGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR GCA 90 bp TCTCAAAGCCTGCTTTATATCTTGTTCTACATTAGGAAATTGCAGTGTGGCTGCGCACCTCCAGGATGTTaGTCAGAAGCTGCGAGCTTG +
Preference number: 4 (lower is better)
Translates to: SQSLLYILFYIRKLQCGCAPPGC*SEAASL
Trigger: CAAGCTCGCAGCTTCTGAGCAACATCCTGGAGGTGC...GCAGCCACACTGCAATTTCCTAATGTAGAACAAGATATAAAGCAGGCTTTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp CCTGTTACCGCCTTGTTCAGTTTGAGCTGCATATTGGCCAATCAAAGTTTATATGCACCTCCAGGATGTTaGTCAGAAGCTGCGAGCTTG +
Preference number: 4 (lower is better)
Translates to: PVTALFSLSCILANQSLYAPPGC*SEAASL
Trigger: CAAGCTCGCAGCTTCTGAGCAACATCCTGGAGGTGC...ATATAAACTTTGATTGGCCAATATGCAGCTCAAACTGAACAAGGCGGTAACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR GCA 90 bp ATGGGCATGTGGGAACTTTCTGGGGTGCTGAAAACAGTGTATGTCTCTATCTTACCCAGGAAAGGTATATaGAGTCGTATACGTGGTCCG +
Preference number: 4 (lower is better)
Translates to: MGMWELSGVLKTVYVSILPRKGI*SRIRGP
Trigger: CGGACCACGTATACGACTGCATATACCTTTCCTGGG...TAAGATAGAGACATACACTGTTTTCAGCACCCCAGAAAGTTCCCACATGCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp CCATCTCTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAATTCTGGTGCTTTCTCTaGAATGACCTGGGACTTGCT +
Preference number: 4 (lower is better)
Translates to: PSLPRCNMGWDQCVHVRKFWCFL*NDLGLA
Trigger: AGCAAGTCCCAGGTCATTGCAGAGAAAGCACCAGAA...TTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAGAGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR GCA 90 bp AATTCCATGTGGACTGGAAGGGAGGTGGCATGGCCTCAAAATTCTATCAAAGAGTTCTGGTGCTTTCTCTaGAATGACCTGGGACTTGCT +
Preference number: 4 (lower is better)
Translates to: NSMWTGREVAWPQNSIKEFWCFL*NDLGLA
Trigger: AGCAAGTCCCAGGTCATTGCAGAGAAAGCACCAGAA...CTCTTTGATAGAATTTTGAGGCCATGCCACCTCCCTTCCAGTCCACATGGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR GCA 90 bp GACACATTATTTATGAATTCTGTCAAATGTGACTCTTCCTACCCAACACCTTCCAGGTGGAGGGGGTGGTaGTTTGGCTTCTCTTCGGAC +
Preference number: 4 (lower is better)
Translates to: DTLFMNSVKCDSSYPTPSRWRGW*FGFSSD
Trigger: GTCCGAAGAGAAGCCAAAGCACCACCCCCTCCACCT...GGAAGGTGTTGGGTAGGAAGAGTCACATTTGACAGAATTCATAAATAATGTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp GACACATTATTTATGAATTCTGTCAAATGTGACTCTTCCTACCCAACACCTTCCCTGCCAGTTCATCCTTaGGGAGCGTCCCAGACAGGA +
Preference number: 4 (lower is better)
Translates to: DTLFMNSVKCDSSYPTPSLPVHP*GASQTG
Trigger: TCCTGTCTGGGACGCTCCCCAAGGATGAACTGGCAG...GGAAGGTGTTGGGTAGGAAGAGTCACATTTGACAGAATTCATAAATAATGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp CTGAGTTTCCCAAATGAAAAGACCTACAGTTACAGACACTGGGGATTTCTTTCTTCCTTCAGCTCCATATaGCCCACGCGGACAATCTGG +
Preference number: 4 (lower is better)
Translates to: LSFPNEKTYSYRHWGFLSSFSSI*PTRTIW
Trigger: CCAGATTGTCCGCGTGGGCCATATGGAGCTGAAGGA...AGAAAGAAATCCCCAGTGTCTGTAACTGTAGGTCTTTTCATTTGGGAAACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CCA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTAACAGGTCAACATTCTaGGTGAGCTTTGTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPNRSTF*VSFVEQ
Trigger: CTGCTCCACAAAGCTCACCCAGAATGTTGACCTGTT...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CCA 90 bp AGTTACAGACACTGGGGATTTCTTTCTGATCATACAATGGCGAAATCCACAGTCGAGTTGTCATCTAACTaGCCGCTGAGCTGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: SYRHWGFLSDHTMAKSTVELSSN*PLSWSV
Trigger: GACAGACCAGCTCAGCGGCCAGTTAGATGACAACTC...GACTGTGGATTTCGCCATTGTATGATCAGAAAGAAATCCCCAGTGTCTGTAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CCA 90 bp AGCACGGAGAAAAACCCTGTTTTGAGTCATATTCATCACCATCCAATCTTTGGCGAGTTGTCATCTAACTaGCCGCTGAGCTGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: STEKNPVLSHIHHHPIFGELSSN*PLSWSV
Trigger: GACAGACCAGCTCAGCGGCCAGTTAGATGACAACTC...GCCAAAGATTGGATGGTGATGAATATGACTCAAAACAGGGTTTTTCTCCGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CCA 90 bp ATGCAAGACTTATATGCAGAAAACTTTCACACGCCATTGAAGGGCACAAAAGCAGAATGTGCACCGCAGTaGCACCCACATCCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: MQDLYAENFHTPLKGTKAECAPQ*HPHPSC
Trigger: ACAGGAAGGATGTGGGTGCCACTGCGGTGCACATTC...TGCTTTTGTGCCCTTCAATGGCGTGTGAAAGTTTTCTGCATATAAGTCTTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CCA 90 bp CCCGGTCTGGAAGGAGCATTGTCAGACGAGTTTGAAGAGGTGGAAACCACAGAGTCACCATCCAATCTTTaGCATAGACATTCTTTCCAA +
Preference number: 4 (lower is better)
Translates to: PGLEGALSDEFEEVETTESPSNL*HRHSFQ
Trigger: TTGGAAAGAATGTCTATGCCAAAGATTGGATGGTGA...CTCTGTGGTTTCCACCTCTTCAAACTCGTCTGACAATGCTCCTTCCAGACCGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CCA 90 bp TTCAGGCAGGAGAGAGCTATTATTTCCATTAAGGTGGAAAGGGAATCATACGGATCCGCATTGGGGAACTaGGTTAACAACCTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: FRQERAIISIKVERESYGSALGN*VNNLRL
Trigger: CAGCCTGAGGTTGTTAACCCAGTTCCCCAATGCGGA...TCCGTATGATTCCCTTTCCACCTTAATGGAAATAATAGCTCTCTCCTGCCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp AATTCCATGTGGACTGGAAGGGAGGTGGCATGGCCTCAAAATTCTATCAAAGAGATGCAGTCGTATACGTaGTCCGTTCAATCCACATCG +
Preference number: 4 (lower is better)
Translates to: NSMWTGREVAWPQNSIKEMQSYT*SVQSTS
Trigger: CGATGTGGATTGAACGGACCACGTATACGACTGCAT...CTCTTTGATAGAATTTTGAGGCCATGCCACCTCCCTTCCAGTCCACATGGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CCA 90 bp CCACACCCCTTCCAGAATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACACATCAAATCGGGTTCTaGTGCTTTCTCTGCAATGAC +
Preference number: 4 (lower is better)
Translates to: PHPFQNLHTHFLSNALDTHQIGF*CFLCND
Trigger: GTCATTGCAGAGAAAGCACCAGAACCCGATTTGATG...TGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATTCTGGAAGGGGTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp AGAAGGTATCCAGACAGTGATGTATCCTATCTTCCCAGCCTCTGCTCAAAGACCTTGTGCTTTTCTGGTTaGGCTCATCAAATCGGGTTC +
Preference number: 4 (lower is better)
Translates to: RRYPDSDVSYLPSLCSKTLCFSG*AHQIGF
Trigger: GAACCCGATTTGATGAGCCCAACCAGAAAAGCACAA...GGTCTTTGAGCAGAGGCTGGGAAGATAGGATACATCACTGTCTGGATACCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp AGAAGGTATCCAGACAGTGATGTATCCTATCTTCCCAGCCTCTGCTCAAAGACCCAACTGGAGACTCTTTaGCCTTTGTGCTTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: RRYPDSDVSYLPSLCSKTQLETL*PLCFSG
Trigger: ACCAGAAAAGCACAAAGGCCAAAGAGTCTCCAGTTG...GGTCTTTGAGCAGAGGCTGGGAAGATAGGATACATCACTGTCTGGATACCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp GACACATTATTTATGAATTCTGTCAAATGTGACTCTTCCTACCCAACACCTTCCGAGGTGGGACAGGAGTaGCCGCGATTCCATCTGTCT +
Preference number: 4 (lower is better)
Translates to: DTLFMNSVKCDSSYPTPSEVGQE*PRFHLS
Trigger: AGACAGATGGAATCGCGGCCACTCCTGTCCCACCTC...GGAAGGTGTTGGGTAGGAAGAGTCACATTTGACAGAATTCATAAATAATGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp GGTTTTGGGCTGGTAAACATCATCCCAGATCAGGAAATGCAGTCAGCAGGGAGCTTGGAAGAACATGACTaGTTTTGGGCTGGTAAACAT +
Preference number: 4 (lower is better)
Translates to: GFGLVNIIPDQEMQSAGSLEEHD*FWAGKH
Trigger: ATGTTTACCAGCCCAAAACCAGTCATGTTCTTCCAA...GCTCCCTGCTGACTGCATTTCCTGATCTGGGATGATGTTTACCAGCCCAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CCA 90 bp CCACACCCCTTCCAGAATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACAGCTCCACCATCAATATaGAAGAACTTGTCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: PHPFQNLHTHFLSNALDTAPPSI*KNLSRL
Trigger: AAGCCTGGACAAGTTCTTCCATATTGATGGTGGAGC...TGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATTCTGGAAGGGGTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp AGAAGGTATCCAGACAGTGATGTATCCTATCTTCCCAGCCTCTGCTCAAAGACCAAGGAAACCACCATTTaGAGAAGGGCTGTATGTGCA +
Preference number: 4 (lower is better)
Translates to: RRYPDSDVSYLPSLCSKTKETTI*RRAVCA
Trigger: TGCACATACAGCCCTTCTCCAAATGGTGGTTTCCTT...GGTCTTTGAGCAGAGGCTGGGAAGATAGGATACATCACTGTCTGGATACCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTTCAAAGACCAGGCTGTaGGACTCATTTCTACTGCTC +
Preference number: 4 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPSKTRL*DSFLLL
Trigger: GAGCAGTAGAAATGAGTCCCACAGCCTGGTCTTTGA...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp AATTCCATGTGGACTGGAAGGGAGGTGGCATGGCCTCAAAATTCTATCAAAGAGCACAAAATGGCACCATaGGCATGTGGGAACTTTCTG +
Preference number: 4 (lower is better)
Translates to: NSMWTGREVAWPQNSIKEHKMAP*ACGNFL
Trigger: CAGAAAGTTCCCACATGCCCATGGTGCCATTTTGTG...CTCTTTGATAGAATTTTGAGGCCATGCCACCTCCCTTCCAGTCCACATGGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp CAAGTAGAGCACTCGGGATTGGATGATGAATCTAAACAAGTACTTCAAGGCTTTGTTCTTCTTCCAGTGTaGCCCAAGGACCATGGCCAG +
Preference number: 4 (lower is better)
Translates to: QVEHSGLDDESKQVLQGFVLLPV*PKDHGQ
Trigger: CTGGCCATGGTCCTTGGGCCACACTGGAAGAAGAAC...AAAGCCTTGAAGTACTTGTTTAGATTCATCATCCAATCCCGAGTGCTCTACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CCA 90 bp CACTTCTTCAGAGTGACACGGCTTGAATCTGCTCCCAACAGCTCCTCAATGGCCATATATGACTCTGGCTaGTTTGTGGAATTCTCAGTT +
Preference number: 4 (lower is better)
Translates to: HFFRVTRLESAPNSSSMAIYDSG*FVEFSV
Trigger: AACTGAGAATTCCACAAACCAGCCAGAGTCATATAT...GGCCATTGAGGAGCTGTTGGGAGCAGATTCAAGCCGTGTCACTCTGAAGAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
3UTR CAA 72 bp CACTCTGACTGTCGAAAAAGAGTGCTCTCTACTATCTaGGTCATGCAGTTAAGTTTCTGCCGAACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: HSDCRKRVLSTI*VMQLSFCRTSW
Trigger: CCAGCTGGTTCGGCAGAAACTTAACTGCATGACCAAGATAGTAGAGAGCACTCTTTTTCGACAGTCAGAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR TCA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTATGAGGGTGGCAATCTaGAAGCTGTCTTTAGTGCTA +
Preference number: 4 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPMRVAI*KLSLVL
Trigger: TAGCACTAAAGACAGCTTTCAGATTGCCACCCTCAT...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR TCA 90 bp AATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACATCTGAGAGCTTTTGCCGTTCCATTATAAGCTaGATGTGCACCGCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: NLHTHFLSNALDTSESFCRSIIS*MCTAVA
Trigger: TGCCACTGCGGTGCACATTCAGCTTATAATGGAACG...GCAAAAGCTCTCAGATGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp TCTCAAAGCCTGCTTTATATCTTGTTCTACATTAGGAAATTGCAGTGTGGCTGCCAATCACTGTCCGGTTaGTCCTTCTCAGCAGCCGTT +
Preference number: 4 (lower is better)
Translates to: SQSLLYILFYIRKLQCGCQSLSG*SFSAAV
Trigger: AACGGCTGCTGAGAAGGATCAACCGGACAGTGATTG...GCAGCCACACTGCAATTTCCTAATGTAGAACAAGATATAAAGCAGGCTTTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp ATGGGCATGTGGGAACTTTCTGGGGTGCTGAAAACAGTGTATGTCTCTATCTTAACTCTTTGCTCAGCTTaGTGGCCTTCTCCCACATTT +
Preference number: 4 (lower is better)
Translates to: MGMWELSGVLKTVYVSILTLCSA*WPSPTF
Trigger: AAATGTGGGAGAAGGCCATCAAGCTGAGCAAAGAGT...TAAGATAGAGACATACACTGTTTTCAGCACCCCAGAAAGTTCCCACATGCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp CCACACCCCTTCCAGAATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACACCTTTCCCCGATAGATaGAGATTTTATTCCGTAGGA +
Preference number: 4 (lower is better)
Translates to: PHPFQNLHTHFLSNALDTPFPDR*RFYSVG
Trigger: TCCTACGGAATAAAATCTTCATCTATCGGGGAAAGG...TGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATTCTGGAAGGGGTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTATTGTCAGACGAGTTTaGAGAGGTGGAAACCACAGA +
Preference number: 4 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPIVRRV*RGGNHR
Trigger: TCTGTGGTTTCCACCTCTTCAAACTCGTCTGACAAT...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR TCA 90 bp ATGCAAGACTTATATGCAGAAAACTTTCACACGCCATTGAAGGGCACAAAAGCACCTTGCAGGTTCAAATaGTTCTCCTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: MQDLYAENFHTPLKGTKAPCRFK*FSCLSL
Trigger: GAGGCTGAGGCAGGAGAATCATTTGAACCTGCAAGG...TGCTTTTGTGCCCTTCAATGGCGTGTGAAAGTTTTCTGCATATAAGTCTTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR TCA 90 bp GCTAGCCCACGTGATTCCGTGTCATCCATGATGCCTGTTTCATGCAATAGACTGGTGTTAAAAGACAATTaGATGGCTAATCCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: ASPRDSVSSMMPVSCNRLVLKDN*MANPGL
Trigger: GAGACCTGGATTAGCCATTCAATTGTCTTTTAACAC...CAGTCTATTGCATGAAACAGGCATCATGGATGACACGGAATCACGTGGGCTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR GCA 90 bp TTGTCAGAGGCAGAACTCCCCTGCAGCCTAACAAGTTCCCCTGATTCATATGCACAGGTCTTCCACAGTTaGCTCTTTCAAATGGATATA +
Preference number: 4 (lower is better)
Translates to: LSEAELPCSLTSSPDSYAQVFHS*LFQMDI
Trigger: TATATCCATTTGAAAGAGGCAACTGTGGAAGACCTG...TGCATATGAATCAGGGGAACTTGTTAGGCTGCAGGGGAGTTCTGCCTCTGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR GCA 90 bp AAAAGAGAGAAATTGAAGATGACTATGAGGTTGCCTGAGCAACTAAATGGATGGCGGAGTCCACAGGTGTaGTTCTTGCCTTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: KREKLKMTMRLPEQLNGWRSPQV*FLPSFS
Trigger: GCTGAAGGAAGGCAAGAAGCACACCTGTGGACTCCG...CCATCCATTTAGTTGCTCAGGCAACCTCATAGTCATCTTCAATTTCTCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR GCA 90 bp CTGAGTTTCCCAAATGAAAAGACCTACAGTTACAGACACTGGGGATTTCTTTCTCTTTCTCCAAGAGCTTaGCCTCCTCATCGTGCACAG +
Preference number: 4 (lower is better)
Translates to: LSFPNEKTYSYRHWGFLSLSPRA*PPHRAQ
Trigger: CTGTGCACGATGAGGAGGGCAAGCTCTTGGAGAAAG...AGAAAGAAATCCCCAGTGTCTGTAACTGTAGGTCTTTTCATTTGGGAAACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR GCA 90 bp AGAAGGTATCCAGACAGTGATGTATCCTATCTTCCCAGCCTCTGCTCAAAGACCCTTGCTGGAGTCATCTaGATTAGCCACATAGAAGTT +
Preference number: 4 (lower is better)
Translates to: RRYPDSDVSYLPSLCSKTLAGVI*ISHIEV
Trigger: AACTTCTATGTGGCTAATGCAGATGACTCCAGCAAG...GGTCTTTGAGCAGAGGCTGGGAAGATAGGATACATCACTGTCTGGATACCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp CTGAGTTTCCCAAATGAAAAGACCTACAGTTACAGACACTGGGGATTTCTTTCTATGTTGCTCAGAAGCTaGGAGCTTGCCTCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: LSFPNEKTYSYRHWGFLSMLLRS*ELASWS
Trigger: TGACCACGAGGCAAGCTCGCAGCTTCTGAGCAACAT...AGAAAGAAATCCCCAGTGTCTGTAACTGTAGGTCTTTTCATTTGGGAAACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR GCA 90 bp ATGCAAGACTTATATGCAGAAAACTTTCACACGCCATTGAAGGGCACAAAAGCAGCAGCAGGGCAATCATaGAAGCCACAAAACTCCCGA +
Preference number: 4 (lower is better)
Translates to: MQDLYAENFHTPLKGTKAAAGQS*KPQNSR
Trigger: TCGGGAGTTTTGTGGCTTGCATGATTGCCCTGCTGC...TGCTTTTGTGCCCTTCAATGGCGTGTGAAAGTTTTCTGCATATAAGTCTTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR GCA 90 bp AGAAGGTATCCAGACAGTGATGTATCCTATCTTCCCAGCCTCTGCTCAAAGACCCTCATGGGTGAGAAATaGAACTGCCAAATGGAAGTA +
Preference number: 4 (lower is better)
Translates to: RRYPDSDVSYLPSLCSKTLMGEK*NCQMEV
Trigger: TACTTCCATTTGGCAGTTGCATTTCTCACCCATGAG...GGTCTTTGAGCAGAGGCTGGGAAGATAGGATACATCACTGTCTGGATACCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp CAGACTGGTAAGTCCCTTGTAGCCAGTGATTTGCGCTCAGAGGAGGTAATAGGACGTAGTCAAATACTTTaGTTTCGTAAGTCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: QTGKSLVASDLRSEEVIGRSQIL*FRKSQP
Trigger: TGGCTGAGACTTACGAAAGCAAAGTATTTGACTACG...TCCTATTACCTCCTCTGAGCGCAAATCACTGGCTACAAGGGACTTACCAGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR GCA 90 bp CTTTGTGCTTTTCTGGTTGGGCTCATCAAATCGGGTTCTGGTGCTTTCTCTGCAAGGCTGAGGCCTCATTaGCTTAATGATGTTCTCATA +
Preference number: 4 (lower is better)
Translates to: LCAFLVGLIKSGSGAFSARLRPH*LNDVLI
Trigger: TATGAGAACATCATTAAGGCAATGAGGCCTCAGCCT...TGCAGAGAAAGCACCAGAACCCGATTTGATGAGCCCAACCAGAAAAGCACAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR GCA 90 bp TCTCAAAGCCTGCTTTATATCTTGTTCTACATTAGGAAATTGCAGTGTGGCTGCGCGATTCCATCTGTCTaGAACGATGGGGAGCTTAGG +
Preference number: 4 (lower is better)
Translates to: SQSLLYILFYIRKLQCGCAIPSV*NDGELR
Trigger: CCTAAGCTCCCCATCGTTGCAGACAGATGGAATCGC...GCAGCCACACTGCAATTTCCTAATGTAGAACAAGATATAAAGCAGGCTTTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp AATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACATCTGAGAGCTTTTGCTGGAGTTCCTCTGGCTaGCTTCATAGGGCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: NLHTHFLSNALDTSESFCWSSSG*LHRACF
Trigger: AAAGCAAGCCCTATGAAGGCAGCCAGAGGAACTCCA...GCAAAAGCTCTCAGATGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp TCTCAAAGCCTGCTTTATATCTTGTTCTACATTAGGAAATTGCAGTGTGGCTGCACTTCTCAGAAGTCGTaGCAGGCTCTAGGTAAGCCC +
Preference number: 4 (lower is better)
Translates to: SQSLLYILFYIRKLQCGCTSQKS*QALGKP
Trigger: GGGCTTACCTAGAGCCTGGCACGACTTCTGAGAAGT...GCAGCCACACTGCAATTTCCTAATGTAGAACAAGATATAAAGCAGGCTTTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp ATGCAAGACTTATATGCAGAAAACTTTCACACGCCATTGAAGGGCACAAAAGCATCTGAGCCATTCACCTaGAGAAGCTCAGCGTGCAAG +
Preference number: 4 (lower is better)
Translates to: MQDLYAENFHTPLKGTKASEPFT*RSSACK
Trigger: CTTGCACGCTGAGCTTCTGCAGGTGAATGGCTCAGA...TGCTTTTGTGCCCTTCAATGGCGTGTGAAAGTTTTCTGCATATAAGTCTTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CCA 90 bp TTCAGGCAGGAGAGAGCTATTATTTCCATTAAGGTGGAAAGGGAATCATACGGATTTCCTCAATCCTTTTaGAGGCCACCTCATGGGCCT +
Preference number: 4 (lower is better)
Translates to: FRQERAIISIKVERESYGFPQSF*RPPHGP
Trigger: AGGCCCATGAGGTGGCCTCCAAAAGGATTGAGGAAA...TCCGTATGATTCCCTTTCCACCTTAATGGAAATAATAGCTCTCTCCTGCCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp ATGCAAGACTTATATGCAGAAAACTTTCACACGCCATTGAAGGGCACAAAAGCAGTACTGAAGATGGACTaGCCCCGCAAATCGAGGTTC +
Preference number: 4 (lower is better)
Translates to: MQDLYAENFHTPLKGTKAVLKMD*PRKSRF
Trigger: GAACCTCGATTTGCGGGGCCAGTCCATCTTCAGTAC...TGCTTTTGTGCCCTTCAATGGCGTGTGAAAGTTTTCTGCATATAAGTCTTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CCA 90 bp GACACATTATTTATGAATTCTGTCAAATGTGACTCTTCCTACCCAACACCTTCCTCCTTCAGCTCCATATaGCCCACGCGGACAATCTGG +
Preference number: 4 (lower is better)
Translates to: DTLFMNSVKCDSSYPTPSSFSSI*PTRTIW
Trigger: CCAGATTGTCCGCGTGGGCCATATGGAGCTGAAGGA...GGAAGGTGTTGGGTAGGAAGAGTCACATTTGACAGAATTCATAAATAATGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp AGTTACAGACACTGGGGATTTCTTTCTGATCATACAATGGCGAAATCCACAGTCAGTGCTATCCTTGCTTaGGGTGAAGGTGACCAGGTT +
Preference number: 4 (lower is better)
Translates to: SYRHWGFLSDHTMAKSTVSAILA*GEGDQV
Trigger: AACCTGGTCACCTTCACCCCAAGCAAGGATAGCACT...GACTGTGGATTTCGCCATTGTATGATCAGAAAGAAATCCCCAGTGTCTGTAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CCA 90 bp TCTCAAAGCCTGCTTTATATCTTGTTCTACATTAGGAAATTGCAGTGTGGCTGCGAGTTGTCATCTAACTaGCCGCTGAGCTGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: SQSLLYILFYIRKLQCGCELSSN*PLSWSV
Trigger: GACAGACCAGCTCAGCGGCCAGTTAGATGACAACTC...GCAGCCACACTGCAATTTCCTAATGTAGAACAAGATATAAAGCAGGCTTTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp ATGCAAGACTTATATGCAGAAAACTTTCACACGCCATTGAAGGGCACAAAAGCAACAAAACTCCCGATGTaGGGAGACTGCCGGTTCATC +
Preference number: 4 (lower is better)
Translates to: MQDLYAENFHTPLKGTKATKLPM*GDCRFI
Trigger: GATGAACCGGCAGTCTCCCCACATCGGGAGTTTTGT...TGCTTTTGTGCCCTTCAATGGCGTGTGAAAGTTTTCTGCATATAAGTCTTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CCA 90 bp CAGACTGGTAAGTCCCTTGTAGCCAGTGATTTGCGCTCAGAGGAGGTAATAGGAATGAATTTGATTTTGTaGGGACCCAGGTTATACCAC +
Preference number: 4 (lower is better)
Translates to: QTGKSLVASDLRSEEVIGMNLIL*GPRLYH
Trigger: GTGGTATAACCTGGGTCCCCACAAAATCAAATTCAT...TCCTATTACCTCCTCTGAGCGCAAATCACTGGCTACAAGGGACTTACCAGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CCA 90 bp CCATCTCTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAAGAAAATGGGGATTGTaGCTTTCCGGAGCTCTACTT +
Preference number: 4 (lower is better)
Translates to: PSLPRCNMGWDQCVHVRKRKWGL*LSGALL
Trigger: AAGTAGAGCTCCGGAAAGCCACAATCCCCATTTTCT...TTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAGAGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CCA 90 bp AAAAGAGAGAAATTGAAGATGACTATGAGGTTGCCTGAGCAACTAAATGGATGGCCCCCTTCTACCTCCTaGTCCAGCTTTGTGATCAGC +
Preference number: 4 (lower is better)
Translates to: KREKLKMTMRLPEQLNGWPPSTS*SSFVIS
Trigger: GCTGATCACAAAGCTGGACCAGGAGGTAGAAGGGGG...CCATCCATTTAGTTGCTCAGGCAACCTCATAGTCATCTTCAATTTCTCTCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CCA 90 bp AATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACATCTGAGAGCTTTTGCCGGCAAGCTCATCACTaGCTTTACAGTGAAGCACTG +
Preference number: 4 (lower is better)
Translates to: NLHTHFLSNALDTSESFCRQAHH*LYSEAL
Trigger: CAGTGCTTCACTGTAAAGCCAGTGATGAGCTTGCCG...GCAAAAGCTCTCAGATGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp AATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACATCTGAGAGCTTTTGCTTCTCTGCAATGACCTaGGACTTGCTCAGACTCCAG +
Preference number: 4 (lower is better)
Translates to: NLHTHFLSNALDTSESFCFSAMT*DLLRLQ
Trigger: CTGGAGTCTGAGCAAGTCCCAGGTCATTGCAGAGAA...GCAAAAGCTCTCAGATGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp GACACATTATTTATGAATTCTGTCAAATGTGACTCTTCCTACCCAACACCTTCCGAATTCCATGTGGACTaGAAGGGAGGTGGCATGGCC +
Preference number: 4 (lower is better)
Translates to: DTLFMNSVKCDSSYPTPSEFHVD*KGGGMA
Trigger: GGCCATGCCACCTCCCTTCCAGTCCACATGGAATTC...GGAAGGTGTTGGGTAGGAAGAGTCACATTTGACAGAATTCATAAATAATGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp CAACTGCCAAATGGAAGTAATTGTTCCAGAGCTGAAGTTCAAAGCTTGCCTGATTTCTGGAATTCCATGTaGACTGGAAGGGAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: QLPNGSNCSRAEVQSLPDFWNSM*TGREVA
Trigger: TGCCACCTCCCTTCCAGTCCACATGGAATTCCAGAA...ATCAGGCAAGCTTTGAACTTCAGCTCTGGAACAATTACTTCCATTTGGCAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CCA 90 bp AGAAGGTATCCAGACAGTGATGTATCCTATCTTCCCAGCCTCTGCTCAAAGACCACCCTCATGATGAACTaGTGTAGTTCTCTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: RRYPDSDVSYLPSLCSKTTLMMN*CSSLLK
Trigger: TTTCAGGAGAGAACTACACCAGTTCATCATGAGGGT...GGTCTTTGAGCAGAGGCTGGGAAGATAGGATACATCACTGTCTGGATACCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp CCACACCCCTTCCAGAATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACATCATTTCTACTGCTCTaGAAGGATAGCCTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: PHPFQNLHTHFLSNALDTSFLLL*KDSLEV
Trigger: AACCTCAAGGCTATCCTTCCAGAGCAGTAGAAATGA...TGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATTCTGGAAGGGGTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp CCATCTCTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAAGCCACAATACTACCTaGAATCCCTTTTGTTCAGGC +
Preference number: 4 (lower is better)
Translates to: PSLPRCNMGWDQCVHVRKSHNTT*NPFCSG
Trigger: GCCTGAACAAAAGGGATTCCAGGTAGTATTGTGGCT...TTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAGAGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp AAAAGAGAGAAATTGAAGATGACTATGAGGTTGCCTGAGCAACTAAATGGATGGCCCCAAGTGATCTGCTaGCCTCAGCTTCCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: KREKLKMTMRLPEQLNGWPQVIC*PQLPKE
Trigger: CTCTTTGGGAAGCTGAGGCCAGCAGATCACTTGGGG...CCATCCATTTAGTTGCTCAGGCAACCTCATAGTCATCTTCAATTTCTCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
3UTR CAA 72 bp CTGTTTCATGCAATAGACTGCACATATATTTTGGCATaGCTGACACAAGGACGGCACCCTCTCTGCATTCCA +
Preference number: 4 (lower is better)
Translates to: LFHAIDCTYILA*LTQGRHPLCIP
Trigger: TGGAATGCAGAGAGGGTGCCGTCCTTGTGTCAGCAATGCCAAAATATATGTGCAGTCTATTGCATGAAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR TCA 90 bp AGTTACAGACACTGGGGATTTCTTTCTGATCATACAATGGCGAAATCCACAGTCTGTGAAAAATTCTTCTaGACCTGGGTGAGGTCACCG +
Preference number: 4 (lower is better)
Translates to: SYRHWGFLSDHTMAKSTVCEKFF*TWVRSP
Trigger: CGGTGACCTCACCCAGGTTCAGAAGAATTTTTCACA...GACTGTGGATTTCGCCATTGTATGATCAGAAAGAAATCCCCAGTGTCTGTAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR TCA 90 bp AGTTACAGACACTGGGGATTTCTTTCTGATCATACAATGGCGAAATCCACAGTCCATCTCCTGGCAGTATaGTTTCAGGAAAGCCCATCT +
Preference number: 4 (lower is better)
Translates to: SYRHWGFLSDHTMAKSTVHLLAV*FQESPS
Trigger: AGATGGGCTTTCCTGAAATCATACTGCCAGGAGATG...GACTGTGGATTTCGCCATTGTATGATCAGAAAGAAATCCCCAGTGTCTGTAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR TCA 90 bp CTGAGTTTCCCAAATGAAAAGACCTACAGTTACAGACACTGGGGATTTCTTTCTTATCCAGCACCAGGGTaGATTGCTTTCTCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: LSFPNEKTYSYRHWGFLSYPAPG*IAFSKS
Trigger: GCTCTTGGAGAAAGCAATTCACCCTGGTGCTGGATA...AGAAAGAAATCCCCAGTGTCTGTAACTGTAGGTCTTTTCATTTGGGAAACTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR TCA 90 bp CAGACTGGTAAGTCCCTTGTAGCCAGTGATTTGCGCTCAGAGGAGGTAATAGGAGATGTCTCCTATCAGTaGAATAATAAATACCAGTGC +
Preference number: 4 (lower is better)
Translates to: QTGKSLVASDLRSEEVIGDVSYQ*NNKYQC
Trigger: GCACTGGTATTTATTATTTCACTGATAGGAGACATC...TCCTATTACCTCCTCTGAGCGCAAATCACTGGCTACAAGGGACTTACCAGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR TCA 90 bp CAACTGCCAAATGGAAGTAATTGTTCCAGAGCTGAAGTTCAAAGCTTGCCTGATATGCCAAAGTGGCGCTaGAGTGCTTGTAAATGTAGG +
Preference number: 4 (lower is better)
Translates to: QLPNGSNCSRAEVQSLPDMPKWR*SACKCR
Trigger: CCTACATTTACAAGCACTTCAGCGCCACTTTGGCAT...ATCAGGCAAGCTTTGAACTTCAGCTCTGGAACAATTACTTCCATTTGGCAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR TCA 90 bp AGAAGGTATCCAGACAGTGATGTATCCTATCTTCCCAGCCTCTGCTCAAAGACCTTGTCAGGAATGCTTTaGATGAATTTGCAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: RRYPDSDVSYLPSLCSKTLSGML*MNLQKS
Trigger: GCTCTTCTGCAAATTCATTCAAAGCATTCCTGACAA...GGTCTTTGAGCAGAGGCTGGGAAGATAGGATACATCACTGTCTGGATACCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp CTTTGTGCTTTTCTGGTTGGGCTCATCAAATCGGGTTCTGGTGCTTTCTCTGCATTGTCAGGAATGCTTTaGATGAATTTGCAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: LCAFLVGLIKSGSGAFSALSGML*MNLQKS
Trigger: GCTCTTCTGCAAATTCATTCAAAGCATTCCTGACAA...TGCAGAGAAAGCACCAGAACCCGATTTGATGAGCCCAACCAGAAAAGCACAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR TCA 90 bp AAAAGAGAGAAATTGAAGATGACTATGAGGTTGCCTGAGCAACTAAATGGATGGCAATCACTGTCCGGTTaGTCCTTCTCAGCAGCCGTT +
Preference number: 4 (lower is better)
Translates to: KREKLKMTMRLPEQLNGWQSLSG*SFSAAV
Trigger: AACGGCTGCTGAGAAGGATCAACCGGACAGTGATTG...CCATCCATTTAGTTGCTCAGGCAACCTCATAGTCATCTTCAATTTCTCTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR TCA 90 bp TCTCAAAGCCTGCTTTATATCTTGTTCTACATTAGGAAATTGCAGTGTGGCTGCGAGAAGGTTTCAAGCTaGAGGGACTCATGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: SQSLLYILFYIRKLQCGCEKVSS*RDSWVR
Trigger: TCTCACCCATGAGTCCCTTCAGCTTGAAACCTTCTC...GCAGCCACACTGCAATTTCCTAATGTAGAACAAGATATAAAGCAGGCTTTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp AGCACGGAGAAAAACCCTGTTTTGAGTCATATTCATCACCATCCAATCTTTGGCACTCTTTGCTCAGCTTaGTGGCCTTCTCCCACATTT +
Preference number: 4 (lower is better)
Translates to: STEKNPVLSHIHHHPIFGTLCSA*WPSPTF
Trigger: AAATGTGGGAGAAGGCCATCAAGCTGAGCAAAGAGT...GCCAAAGATTGGATGGTGATGAATATGACTCAAAACAGGGTTTTTCTCCGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR TCA 90 bp TTCAGGCAGGAGAGAGCTATTATTTCCATTAAGGTGGAAAGGGAATCATACGGAGCAAAGTATTCAGGCTaGGGCCTCATTGCCTTAATG +
Preference number: 4 (lower is better)
Translates to: FRQERAIISIKVERESYGAKYSG*GLIALM
Trigger: CATTAAGGCAATGAGGCCTCAGCCTGAATACTTTGC...TCCGTATGATTCCCTTTCCACCTTAATGGAAATAATAGCTCTCTCCTGCCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp AATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACATCTGAGAGCTTTTGCTCACTGGCTTTACAGTaGAGCACTGCATGTACTGCT +
Preference number: 4 (lower is better)
Translates to: NLHTHFLSNALDTSESFCSLALQ*STACTA
Trigger: AGCAGTACATGCAGTGCTTCACTGTAAAGCCAGTGA...GCAAAAGCTCTCAGATGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp CAACTGCCAAATGGAAGTAATTGTTCCAGAGCTGAAGTTCAAAGCTTGCCTGATGGAGGTGAAGAACCGTaGAATGGTGATAGCCGATTA +
Preference number: 4 (lower is better)
Translates to: QLPNGSNCSRAEVQSLPDGGEEP*NGDSRL
Trigger: TAATCGGCTATCACCATTTCACGGTTCTTCACCTCC...ATCAGGCAAGCTTTGAACTTCAGCTCTGGAACAATTACTTCCATTTGGCAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR TCA 90 bp AGCACGGAGAAAAACCCTGTTTTGAGTCATATTCATCACCATCCAATCTTTGGCCTCTGCCGTACAGGCTaGCATTTAACAATGGTGAAG +
Preference number: 4 (lower is better)
Translates to: STEKNPVLSHIHHHPIFGLCRTG*HLTMVK
Trigger: CTTCACCATTGTTAAATGTCAGCCTGTACGGCAGAG...GCCAAAGATTGGATGGTGATGAATATGACTCAAAACAGGGTTTTTCTCCGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR TCA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTATAGACACACATACCTaGAAGCAGCCAATCTCCATT +
Preference number: 4 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPIDTHT*KQPISI
Trigger: AATGGAGATTGGCTGCTTTCAGGTATGTGTGTCTAT...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR TCA 90 bp GACACATTATTTATGAATTCTGTCAAATGTGACTCTTCCTACCCAACACCTTCCGGTGTAGTTCTCTCCTaGAAGGGTGGCGGTGAAACA +
Preference number: 4 (lower is better)
Translates to: DTLFMNSVKCDSSYPTPSGVVLS*KGGGET
Trigger: TGTTTCACCGCCACCCTTTCAGGAGAGAACTACACC...GGAAGGTGTTGGGTAGGAAGAGTCACATTTGACAGAATTCATAAATAATGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp ATGCAAGACTTATATGCAGAAAACTTTCACACGCCATTGAAGGGCACAAAAGCAAACATGGTAACAAAGTaGGGTAGGATGGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: MQDLYAENFHTPLKGTKANMVTK*GRMGWG
Trigger: TCCCCAGCCCATCCTACCTCACTTTGTTACCATGTT...TGCTTTTGTGCCCTTCAATGGCGTGTGAAAGTTTTCTGCATATAAGTCTTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR GCA 90 bp ACCCTATCTATCTACTGTTCAAAGCCAACAACAATGGCACTATTAGCTAGACTGACTGTGTCACCGATCTaGAAGGAGAGCTCCACATCT +
Preference number: 4 (lower is better)
Translates to: TLSIYCSKPTTMALLARLTVSPI*KESSTS
Trigger: AGATGTGGAGCTCTCCTTGCAGATCGGTGACACAGT...CAGTCTAGCTAATAGTGCCATTGTTGTTGGCTTTGAACAGTAGATAGATAGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410074.5
CDS-3UTR GCA 90 bp TATGACTCTGGCTGGTTTGTGGAATTCTCAGTTTGTTCTACTTGTCTGCAGTGGCGCAAATCGAGGTTCTaGAGGATTGACTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: YDSGWFVEFSVCSTCLQWRKSRF*RIDFSS
Trigger: AGAAGAGAAGTCAATCCTGCAGAACCTCGATTTGCG...CCACTGCAGACAAGTAGAACAAACTGAGAATTCCACAAACCAGCCAGAGTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR GCA 90 bp TTCAGGCAGGAGAGAGCTATTATTTCCATTAAGGTGGAAAGGGAATCATACGGAGGCCATAAACAACTCTaGATCTTCCCCGATGTTGCA +
Preference number: 4 (lower is better)
Translates to: FRQERAIISIKVERESYGGHKQL*IFPDVA
Trigger: TGCAACATCGGGGAAGATGCAGAGTTGTTTATGGCC...TCCGTATGATTCCCTTTCCACCTTAATGGAAATAATAGCTCTCTCCTGCCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp ATGCAAGACTTATATGCAGAAAACTTTCACACGCCATTGAAGGGCACAAAAGCAAGCACCAGGGTGAATTaGTTTCTCCAAGAGCTTGCC +
Preference number: 4 (lower is better)
Translates to: MQDLYAENFHTPLKGTKASTRVN*FLQELA
Trigger: GGCAAGCTCTTGGAGAAAGCAATTCACCCTGGTGCT...TGCTTTTGTGCCCTTCAATGGCGTGTGAAAGTTTTCTGCATATAAGTCTTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR GCA 90 bp CTGAGTTTCCCAAATGAAAAGACCTACAGTTACAGACACTGGGGATTTCTTTCTGAAGGCCACCCCAAATaGTCGCTCCGATTTATCTCT +
Preference number: 4 (lower is better)
Translates to: LSFPNEKTYSYRHWGFLSEGHPK*SLRFIS
Trigger: AGAGATAAATCGGAGCGAGCATTTGGGGTGGCCTTC...AGAAAGAAATCCCCAGTGTCTGTAACTGTAGGTCTTTTCATTTGGGAAACTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR GCA 90 bp CCTGTTACCGCCTTGTTCAGTTTGAGCTGCATATTGGCCAATCAAAGTTTATATAAGGTACTTCAAAGCTaGCCCCTTGATCTTGACGGC +
Preference number: 4 (lower is better)
Translates to: PVTALFSLSCILANQSLYKVLQS*PLDLDG
Trigger: GCCGTCAAGATCAAGGGGGCAGCTTTGAAGTACCTT...ATATAAACTTTGATTGGCCAATATGCAGCTCAAACTGAACAAGGCGGTAACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR GCA 90 bp CAAGTAGAGCACTCGGGATTGGATGATGAATCTAAACAAGTACTTCAAGGCTTTAAGGTACTTCAAAGCTaGCCCCTTGATCTTGACGGC +
Preference number: 4 (lower is better)
Translates to: QVEHSGLDDESKQVLQGFKVLQS*PLDLDG
Trigger: GCCGTCAAGATCAAGGGGGCAGCTTTGAAGTACCTT...AAAGCCTTGAAGTACTTGTTTAGATTCATCATCCAATCCCGAGTGCTCTACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR GCA 90 bp CCTGTTACCGCCTTGTTCAGTTTGAGCTGCATATTGGCCAATCAAAGTTTATATCTGTCGTCCATTTGCTaGAGCAGGGCAATCATGCAA +
Preference number: 4 (lower is better)
Translates to: PVTALFSLSCILANQSLYLSSIC*SRAIMQ
Trigger: TTGCATGATTGCCCTGCTGCAGCAAATGGACGACAG...ATATAAACTTTGATTGGCCAATATGCAGCTCAAACTGAACAAGGCGGTAACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR GCA 90 bp AAAAGAGAGAAATTGAAGATGACTATGAGGTTGCCTGAGCAACTAAATGGATGGTGGCTGTCGTCCATTTaGTGCAGCAGGGCAATCATG +
Preference number: 4 (lower is better)
Translates to: KREKLKMTMRLPEQLNGWWLSSI*CSRAIM
Trigger: CATGATTGCCCTGCTGCAGCAAATGGACGACAGCCA...CCATCCATTTAGTTGCTCAGGCAACCTCATAGTCATCTTCAATTTCTCTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR GCA 90 bp CTGAGTTTCCCAAATGAAAAGACCTACAGTTACAGACACTGGGGATTTCTTTCTTCAGCACGTTCACAGTaGAGCTCATACGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LSFPNEKTYSYRHWGFLSSARSQ*SSYGSP
Trigger: AGGAGAACCGTATGAGCTGCACTGTGAACGTGCTGA...AGAAAGAAATCCCCAGTGTCTGTAACTGTAGGTCTTTTCATTTGGGAAACTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR GCA 90 bp ATGGGCATGTGGGAACTTTCTGGGGTGCTGAAAACAGTGTATGTCTCTATCTTATTCTCACAGTCTCGGTaGAAATCTCGAAGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: MGMWELSGVLKTVYVSILFSQSR*KSRSLY
Trigger: GTACAAGCTTCGAGATTTGCACCGAGACTGTGAGAA...TAAGATAGAGACATACACTGTTTTCAGCACCCCAGAAAGTTCCCACATGCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp CTTTGTGCTTTTCTGGTTGGGCTCATCAAATCGGGTTCTGGTGCTTTCTCTGCACGTAGTCAAATACTTTaGTTTCGTAAGTCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: LCAFLVGLIKSGSGAFSARSQIL*FRKSQP
Trigger: TGGCTGAGACTTACGAAAGCAAAGTATTTGACTACG...TGCAGAGAAAGCACCAGAACCCGATTTGATGAGCCCAACCAGAAAAGCACAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR GCA 90 bp AATTCCATGTGGACTGGAAGGGAGGTGGCATGGCCTCAAAATTCTATCAAAGAGAGGCTGAGGCCTCATTaGCTTAATGATGTTCTCATA +
Preference number: 4 (lower is better)
Translates to: NSMWTGREVAWPQNSIKERLRPH*LNDVLI
Trigger: TATGAGAACATCATTAAGGCAATGAGGCCTCAGCCT...CTCTTTGATAGAATTTTGAGGCCATGCCACCTCCCTTCCAGTCCACATGGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR GCA 90 bp TCTCAAAGCCTGCTTTATATCTTGTTCTACATTAGGAAATTGCAGTGTGGCTGCGTTTCTCCCCATGGATaGGGATCCCTTCTGTTAGCA +
Preference number: 4 (lower is better)
Translates to: SQSLLYILFYIRKLQCGCVSPHG*GSLLLA
Trigger: TGCTAACAGAAGGGATCCGCATCCATGGGGAGAAAC...GCAGCCACACTGCAATTTCCTAATGTAGAACAAGATATAAAGCAGGCTTTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTGTAGATTACAGGGGTTaGTCCACCATCAATATGGAA +
Preference number: 4 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPVDYRG*STINME
Trigger: TTCCATATTGATGGTGGAGCAACCCCTGTAATCTAC...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR GCA 90 bp CAACTGCCAAATGGAAGTAATTGTTCCAGAGCTGAAGTTCAAAGCTTGCCTGATCTGGAGTCATACATATaGCAAAGTGGCGCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: QLPNGSNCSRAEVQSLPDLESYI*QSGAEV
Trigger: CACTTCAGCGCCACTTTGGCATATGTATGACTCCAG...ATCAGGCAAGCTTTGAACTTCAGCTCTGGAACAATTACTTCCATTTGGCAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CCA 90 bp GACACATTATTTATGAATTCTGTCAAATGTGACTCTTCCTACCCAACACCTTCCGCTTCTCTATTTCCTTaGGCATCCCGTTACTGCCCC +
Preference number: 4 (lower is better)
Translates to: DTLFMNSVKCDSSYPTPSASLFP*ASRYCP
Trigger: GGGGCAGTAACGGGATGCCCAAGGAAATAGAGAAGC...GGAAGGTGTTGGGTAGGAAGAGTCACATTTGACAGAATTCATAAATAATGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp AGTTACAGACACTGGGGATTTCTTTCTGATCATACAATGGCGAAATCCACAGTCAACAGGTCAACATTCTaGGTGAGCTTTGTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: SYRHWGFLSDHTMAKSTVNRSTF*VSFVEQ
Trigger: CTGCTCCACAAAGCTCACCCAGAATGTTGACCTGTT...GACTGTGGATTTCGCCATTGTATGATCAGAAAGAAATCCCCAGTGTCTGTAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CCA 90 bp CTGAGTTTCCCAAATGAAAAGACCTACAGTTACAGACACTGGGGATTTCTTTCTCGTGGTCAGGCTTGTTaGAGTTGTCATCTAACTGGC +
Preference number: 4 (lower is better)
Translates to: LSFPNEKTYSYRHWGFLSRGQAC*SCHLTG
Trigger: GCCAGTTAGATGACAACTCCAACAAGCCTGACCACG...AGAAAGAAATCCCCAGTGTCTGTAACTGTAGGTCTTTTCATTTGGGAAACTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CCA 90 bp ATGCAAGACTTATATGCAGAAAACTTTCACACGCCATTGAAGGGCACAAAAGCAAGACCTCCCCAGAGCTaGAGAGGTATTTGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: MQDLYAENFHTPLKGTKARPPQS*RGICVS
Trigger: GGAAACACAAATACCTCTCCAGCTCTGGGGAGGTCT...TGCTTTTGTGCCCTTCAATGGCGTGTGAAAGTTTTCTGCATATAAGTCTTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CCA 90 bp CCATCTCTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAACGATTATCCATCAACTaGAGACTCTTTGGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: PSLPRCNMGWDQCVHVRKRLSIN*RLFGLC
Trigger: ACAAAGGCCAAAGAGTCTCCAGTTGATGGATAATCG...TTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAGAGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CCA 90 bp ATGGGCATGTGGGAACTTTCTGGGGTGCTGAAAACAGTGTATGTCTCTATCTTAGGCAAATACCAGCTCTaGCAGCAGAAATGGAAATCT +
Preference number: 4 (lower is better)
Translates to: MGMWELSGVLKTVYVSILGKYQL*QQKWKS
Trigger: AGATTTCCATTTCTGCTGCCAGAGCTGGTATTTGCC...TAAGATAGAGACATACACTGTTTTCAGCACCCCAGAAAGTTCCCACATGCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp ATGCAAGACTTATATGCAGAAAACTTTCACACGCCATTGAAGGGCACAAAAGCAGTAATCCTAGTACTCTaGGAGGCTGAAGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: MQDLYAENFHTPLKGTKAVILVL*EAEVGG
Trigger: TCCTCCCACTTCAGCCTCCCAGAGTACTAGGATTAC...TGCTTTTGTGCCCTTCAATGGCGTGTGAAAGTTTTCTGCATATAAGTCTTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CCA 90 bp AAAAGAGAGAAATTGAAGATGACTATGAGGTTGCCTGAGCAACTAAATGGATGGCAGGCTGGAGTATGGTaGCACCATCTCAGCATACTG +
Preference number: 4 (lower is better)
Translates to: KREKLKMTMRLPEQLNGWQAGVW*HHLSIL
Trigger: CAGTATGCTGAGATGGTGCCACCATACTCCAGCCTG...CCATCCATTTAGTTGCTCAGGCAACCTCATAGTCATCTTCAATTTCTCTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CCA 90 bp AATTCCATGTGGACTGGAAGGGAGGTGGCATGGCCTCAAAATTCTATCAAAGAGGCAGTTCAGTCTTGCTaGAGTCATACATATGCCAAA +
Preference number: 4 (lower is better)
Translates to: NSMWTGREVAWPQNSIKEAVQSC*SHTYAK
Trigger: TTTGGCATATGTATGACTCCAGCAAGACTGAACTGC...CTCTTTGATAGAATTTTGAGGCCATGCCACCTCCCTTCCAGTCCACATGGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
3UTR CAA 72 bp CTTTCCAATCCTACAGCACACCAGAGTGAACTGTCTTaGTATACTGGGGCTGTTTCCATTGAACACACTCAA +
Preference number: 4 (lower is better)
Translates to: LSNPTAHQSELS*YTGAVSIEHTQ
Trigger: TTGAGTGTGTTCAATGGAAACAGCCCCAGTATACAAAGACAGTTCACTCTGGTGTGCTGTAGGATTGGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR CAA 72 bp AAATGGGACAAGTATAGTCCATGGACCTCAAAGCCTTaGTACAGAAAACTAGTTTCCTTCAGATCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: KWDKYSPWTSKP*YRKLVSFRSSP
Trigger: GGGGGAGGATCTGAAGGAAACTAGTTTTCTGTACAAAGGCTTTGAGGTCCATGGACTATACTTGTCCCATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp ATGCAAGACTTATATGCAGAAAACTTTCACACGCCATTGAAGGGCACAAAAGCACTCCCCAATCACGTGTaGTGTTATCAAAGGCGACAT +
Preference number: 4 (lower is better)
Translates to: MQDLYAENFHTPLKGTKALPNHV*CYQRRH
Trigger: ATGTCGCCTTTGATAACATCACACGTGATTGGGGAG...TGCTTTTGTGCCCTTCAATGGCGTGTGAAAGTTTTCTGCATATAAGTCTTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR TCA 90 bp AATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACATCTGAGAGCTTTTGCTATTCAAGACTGAAGTaGGTGGCTCATTCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: NLHTHFLSNALDTSESFCYSRLK*VAHSPQ
Trigger: TTGGGGAGAATGAGCCACTCACTTCAGTCTTGAATA...GCAAAAGCTCTCAGATGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp AGTTACAGACACTGGGGATTTCTTTCTGATCATACAATGGCGAAATCCACAGTCTATTCAAGACTGAAGTaGGTGGCTCATTCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: SYRHWGFLSDHTMAKSTVYSRLK*VAHSPQ
Trigger: TTGGGGAGAATGAGCCACTCACTTCAGTCTTGAATA...GACTGTGGATTTCGCCATTGTATGATCAGAAAGAAATCCCCAGTGTCTGTAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR TCA 90 bp CCTGTTACCGCCTTGTTCAGTTTGAGCTGCATATTGGCCAATCAAAGTTTATATCACCGTGGATCAGGGTaGCATAAATGTCATTCCGAA +
Preference number: 4 (lower is better)
Translates to: PVTALFSLSCILANQSLYHRGSG*HKCHSE
Trigger: TTCGGAATGACATTTATGTCACCCTGATCCACGGTG...ATATAAACTTTGATTGGCCAATATGCAGCTCAAACTGAACAAGGCGGTAACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR TCA 90 bp CCTGTTACCGCCTTGTTCAGTTTGAGCTGCATATTGGCCAATCAAAGTTTATATTTATCTCTGGTTTCCTaGGATGACCTGTGTCGGAAG +
Preference number: 4 (lower is better)
Translates to: PVTALFSLSCILANQSLYLSLVS*DDLCRK
Trigger: CTTCCGACACAGGTCATCTCAGGAAACCAGAGATAA...ATATAAACTTTGATTGGCCAATATGCAGCTCAAACTGAACAAGGCGGTAACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR TCA 90 bp CTGAGTTTCCCAAATGAAAAGACCTACAGTTACAGACACTGGGGATTTCTTTCTATGCCAAAGTGGCGCTaGAGTGCTTGTAAATGTAGG +
Preference number: 4 (lower is better)
Translates to: LSFPNEKTYSYRHWGFLSMPKWR*SACKCR
Trigger: CCTACATTTACAAGCACTTCAGCGCCACTTTGGCAT...AGAAAGAAATCCCCAGTGTCTGTAACTGTAGGTCTTTTCATTTGGGAAACTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR TCA 90 bp AAAAGAGAGAAATTGAAGATGACTATGAGGTTGCCTGAGCAACTAAATGGATGGCGTTCCATTATAAGCTaGATGTGCACCGCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: KREKLKMTMRLPEQLNGWRSIIS*MCTAVA
Trigger: TGCCACTGCGGTGCACATTCAGCTTATAATGGAACG...CCATCCATTTAGTTGCTCAGGCAACCTCATAGTCATCTTCAATTTCTCTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR TCA 90 bp AAAAGAGAGAAATTGAAGATGACTATGAGGTTGCCTGAGCAACTAAATGGATGGGAGAAGGTTTCAAGCTaGAGGGACTCATGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: KREKLKMTMRLPEQLNGWEKVSS*RDSWVR
Trigger: TCTCACCCATGAGTCCCTTCAGCTTGAAACCTTCTC...CCATCCATTTAGTTGCTCAGGCAACCTCATAGTCATCTTCAATTTCTCTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR TCA 90 bp ATGAGAAAGGAAGCCACAAATTTGAAGGGCCTTATAAATACCTTTCACAAAATGTCCCAGGCATGCTGCTaGACACAGTTGCTGATCCTC +
Preference number: 4 (lower is better)
Translates to: MRKEATNLKGLINTFHKMSQACC*TQLLIL
Trigger: GAGGATCAGCAACTGTGTTCAGCAGCATGCCTGGGA...CATTTTGTGAAAGGTATTTATAAGGCCCTTCAAATTTGTGGCTTCCTTTCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp AATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACATCTGAGAGCTTTTGCAAGGTATCCAGACAGTaGTGTATCCTATCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: NLHTHFLSNALDTSESFCKVSRQ*CILSSQ
Trigger: CTGGGAAGATAGGATACATCACTGTCTGGATACCTT...GCAAAAGCTCTCAGATGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTTTTGCAGTCATCCTCTaGCTTCAGGACACATTATTT +
Preference number: 4 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPFAVIL*LQDTLF
Trigger: AAATAATGTGTCCTGAAGTCAGAGGATGACTGCAAA...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp AGAAGGTATCCAGACAGTGATGTATCCTATCTTCCCAGCCTCTGCTCAAAGACCTGGCAAAGGCATTTTTaGCAAAGTTTAGACAAACGA +
Preference number: 4 (lower is better)
Translates to: RRYPDSDVSYLPSLCSKTWQRHF*QSLDKR
Trigger: TCGTTTGTCTAAACTTTGTCAAAAATGCCTTTGCCA...GGTCTTTGAGCAGAGGCTGGGAAGATAGGATACATCACTGTCTGGATACCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp AAAAGAGAGAAATTGAAGATGACTATGAGGTTGCCTGAGCAACTAAATGGATGGTGTACTCCACCCTGTTaGAACAAGCTCTCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: KREKLKMTMRLPEQLNGWCTPPC*NKLSEP
Trigger: TGGCTCAGAGAGCTTGTTTCAACAGGGTGGAGTACA...CCATCCATTTAGTTGCTCAGGCAACCTCATAGTCATCTTCAATTTCTCTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR GCA 90 bp CCTGTTACCGCCTTGTTCAGTTTGAGCTGCATATTGGCCAATCAAAGTTTATATGGCCATAAACAACTCTaGATCTTCCCCGATGTTGCA +
Preference number: 4 (lower is better)
Translates to: PVTALFSLSCILANQSLYGHKQL*IFPDVA
Trigger: TGCAACATCGGGGAAGATGCAGAGTTGTTTATGGCC...ATATAAACTTTGATTGGCCAATATGCAGCTCAAACTGAACAAGGCGGTAACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR GCA 90 bp ATGCAAGACTTATATGCAGAAAACTTTCACACGCCATTGAAGGGCACAAAAGCACACAGGTGTGCTTCTTaGCTTCCTTCAGCTCCATAT +
Preference number: 4 (lower is better)
Translates to: MQDLYAENFHTPLKGTKAHRCAS*LPSAPY
Trigger: ATATGGAGCTGAAGGAAGGCAAGAAGCACACCTGTG...TGCTTTTGTGCCCTTCAATGGCGTGTGAAAGTTTTCTGCATATAAGTCTTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR GCA 90 bp ATGCAAGACTTATATGCAGAAAACTTTCACACGCCATTGAAGGGCACAAAAGCAGCAGCAGCACTTCTCTaGACTCTGACTGTCGAAAAA +
Preference number: 4 (lower is better)
Translates to: MQDLYAENFHTPLKGTKAAAALL*TLTVEK
Trigger: TTTTTCGACAGTCAGAGTGCAGAGAAGTGCTGCTGC...TGCTTTTGTGCCCTTCAATGGCGTGTGAAAGTTTTCTGCATATAAGTCTTGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR GCA 90 bp ATGAGAAAGGAAGCCACAAATTTGAAGGGCCTTATAAATACCTTTCACAAAATGCAGAAGCTGCGAGCTTaGCTCGTGGTCAGGCTTGTT +
Preference number: 4 (lower is better)
Translates to: MRKEATNLKGLINTFHKMQKLRA*LVVRLV
Trigger: AACAAGCCTGACCACGAGGCAAGCTCGCAGCTTCTG...CATTTTGTGAAAGGTATTTATAAGGCCCTTCAAATTTGTGGCTTCCTTTCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp CTTTGTGCTTTTCTGGTTGGGCTCATCAAATCGGGTTCTGGTGCTTTCTCTGCAGGTGAGAAATGCAACTaGCAAATGGAAGTAATTGTT +
Preference number: 4 (lower is better)
Translates to: LCAFLVGLIKSGSGAFSAGEKCN*QMEVIV
Trigger: AACAATTACTTCCATTTGGCAGTTGCATTTCTCACC...TGCAGAGAAAGCACCAGAACCCGATTTGATGAGCCCAACCAGAAAAGCACAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR GCA 90 bp AGAAGGTATCCAGACAGTGATGTATCCTATCTTCCCAGCCTCTGCTCAAAGACCTCTACATTAGGAAATTaGAGTGTGGCTGCAGTTTTT +
Preference number: 4 (lower is better)
Translates to: RRYPDSDVSYLPSLCSKTSTLGN*SVAAVF
Trigger: AAAAACTGCAGCCACACTGCAATTTCCTAATGTAGA...GGTCTTTGAGCAGAGGCTGGGAAGATAGGATACATCACTGTCTGGATACCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp CCTGTTACCGCCTTGTTCAGTTTGAGCTGCATATTGGCCAATCAAAGTTTATATAAAAGTGGACTGGTCTaGGTCGTAGAGGGCCATAAA +
Preference number: 4 (lower is better)
Translates to: PVTALFSLSCILANQSLYKSGLV*VVEGHK
Trigger: TTTATGGCCCTCTACGACCCAGACCAGTCCACTTTT...ATATAAACTTTGATTGGCCAATATGCAGCTCAAACTGAACAAGGCGGTAACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CCA 90 bp CCATCTCTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAATCTGTAAACACTGCTTaGAGGTTATTGAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: PSLPRCNMGWDQCVHVRKSVNTA*RLLSFS
Trigger: AGAGAAGCTCAATAACCTCCAAGCAGTGTTTACAGA...TTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAGAGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTCAATTTTGTTGCGCTTaGCTTGTGAGAAGGTTTCAA +
Preference number: 4 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPQFCCA*LVRRFQ
Trigger: TTGAAACCTTCTCACAAGCCAAGCGCAACAAAATTG...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CCA 90 bp AGTTACAGACACTGGGGATTTCTTTCTGATCATACAATGGCGAAATCCACAGTCAGAAAATGGGGATTGTaGCTTTCCGGAGCTCTACTT +
Preference number: 4 (lower is better)
Translates to: SYRHWGFLSDHTMAKSTVRKWGL*LSGALL
Trigger: AAGTAGAGCTCCGGAAAGCCACAATCCCCATTTTCT...GACTGTGGATTTCGCCATTGTATGATCAGAAAGAAATCCCCAGTGTCTGTAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CCA 90 bp AGCACGGAGAAAAACCCTGTTTTGAGTCATATTCATCACCATCCAATCTTTGGCAGAAAATGGGGATTGTaGCTTTCCGGAGCTCTACTT +
Preference number: 4 (lower is better)
Translates to: STEKNPVLSHIHHHPIFGRKWGL*LSGALL
Trigger: AAGTAGAGCTCCGGAAAGCCACAATCCCCATTTTCT...GCCAAAGATTGGATGGTGATGAATATGACTCAAAACAGGGTTTTTCTCCGTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CCA 90 bp GACACATTATTTATGAATTCTGTCAAATGTGACTCTTCCTACCCAACACCTTCCGTGAGTTTCTCCCCATaGATGCGGATCCCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: DTLFMNSVKCDSSYPTPSVSFSP*MRIPSV
Trigger: AACAGAAGGGATCCGCATCCATGGGGAGAAACTCAC...GGAAGGTGTTGGGTAGGAAGAGTCACATTTGACAGAATTCATAAATAATGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp AGCACGGAGAAAAACCCTGTTTTGAGTCATATTCATCACCATCCAATCTTTGGCTTGTGCTTTTCTGGTTaGGCTCATCAAATCGGGTTC +
Preference number: 4 (lower is better)
Translates to: STEKNPVLSHIHHHPIFGLCFSG*AHQIGF
Trigger: GAACCCGATTTGATGAGCCCAACCAGAAAAGCACAA...GCCAAAGATTGGATGGTGATGAATATGACTCAAAACAGGGTTTTTCTCCGTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CCA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTTTGGAAGAACATGACTaGTTTTGGGCTGGTAAACAT +
Preference number: 4 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPLEEHD*FWAGKH
Trigger: ATGTTTACCAGCCCAAAACCAGTCATGTTCTTCCAA...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CCA 90 bp AATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACATCTGAGAGCTTTTGCTTCCAAGATGCAATATaGGATGGGATCAGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: NLHTHFLSNALDTSESFCFQDAI*DGISVS
Trigger: GGACACACTGATCCCATCCCATATTGCATCTTGGAA...GCAAAAGCTCTCAGATGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp CCTGTTACCGCCTTGTTCAGTTTGAGCTGCATATTGGCCAATCAAAGTTTATATCGCTTGTGGAGAATGTaGGAGGTGGTGAGTAAAAGA +
Preference number: 4 (lower is better)
Translates to: PVTALFSLSCILANQSLYRLWRM*EVVSKR
Trigger: TCTTTTACTCACCACCTCCCACATTCTCCACAAGCG...ATATAAACTTTGATTGGCCAATATGCAGCTCAAACTGAACAAGGCGGTAACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CCA 90 bp GGCTGGTTTGTGGAATTCTCAGTTTGTTCTACTTGTCTGCAGTGGCAGCTGCAACCTTCTCTGAGAAAATaGTTTCTAACACCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: GWFVEFSVCSTCLQWQLQPSLRK*FLTPVS
Trigger: AGAAACAGGTGTTAGAAACCATTTTCTCAGAGAAGG...TTGCAGCTGCCACTGCAGACAAGTAGAACAAACTGAGAATTCCACAAACCAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481100.5
3UTR CAA 72 bp CAGGTGAGTACCTCTTCTTTCCCATATTTCATCTCATaGAAACCTCACAACAACCGATGCAGGAGGCATTAT +
Preference number: 4 (lower is better)
Translates to: QVSTSSFPYFIS*KPHNNRCRRHY
Trigger: ATAATGCCTCCTGCATCGGTTGTTGTGAGGTTTCAATGAGATGAAATATGGGAAAGAAGAGGTACTCACCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp AAAAGAGAGAAATTGAAGATGACTATGAGGTTGCCTGAGCAACTAAATGGATGGACCAACAGGGCTGCTTaGCTTGGTAATAGACTACTG +
Preference number: 4 (lower is better)
Translates to: KREKLKMTMRLPEQLNGWTNRAA*LGNRLL
Trigger: CAGTAGTCTATTACCAAGTCAAGCAGCCCTGTTGGT...CCATCCATTTAGTTGCTCAGGCAACCTCATAGTCATCTTCAATTTCTCTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR TCA 90 bp ATGCAAGACTTATATGCAGAAAACTTTCACACGCCATTGAAGGGCACAAAAGCAATGAGGGTGGCAATCTaGAAGCTGTCTTTAGTGCTA +
Preference number: 4 (lower is better)
Translates to: MQDLYAENFHTPLKGTKAMRVAI*KLSLVL
Trigger: TAGCACTAAAGACAGCTTTCAGATTGCCACCCTCAT...TGCTTTTGTGCCCTTCAATGGCGTGTGAAAGTTTTCTGCATATAAGTCTTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR TCA 90 bp CAAGTAGAGCACTCGGGATTGGATGATGAATCTAAACAAGTACTTCAAGGCTTTATGAGGGTGGCAATCTaGAAGCTGTCTTTAGTGCTA +
Preference number: 4 (lower is better)
Translates to: QVEHSGLDDESKQVLQGFMRVAI*KLSLVL
Trigger: TAGCACTAAAGACAGCTTTCAGATTGCCACCCTCAT...AAAGCCTTGAAGTACTTGTTTAGATTCATCATCCAATCCCGAGTGCTCTACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR TCA 90 bp CCATCTCTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGATGTCTCCTATCAGTaGAATAATAAATACCAGTGC +
Preference number: 4 (lower is better)
Translates to: PSLPRCNMGWDQCVHVRKDVSYQ*NNKYQC
Trigger: GCACTGGTATTTATTATTTCACTGATAGGAGACATC...TTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAGAGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR TCA 90 bp CCATCTCTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAAGAACTTCAGCAAACTaGTTTATAGCACGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: PSLPRCNMGWDQCVHVRKRTSAN*FIARRK
Trigger: TTTTCTCCGTGCTATAAATCAGTTTGCTGAAGTTCT...TTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAGAGATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR TCA 90 bp AGTTACAGACACTGGGGATTTCTTTCTGATCATACAATGGCGAAATCCACAGTCAGTTCAAAGCTTGCCTaGTCCATGAAGAATCTTGTG +
Preference number: 4 (lower is better)
Translates to: SYRHWGFLSDHTMAKSTVSSKLA*SMKNLV
Trigger: CACAAGATTCTTCATGGATCAGGCAAGCTTTGAACT...GACTGTGGATTTCGCCATTGTATGATCAGAAAGAAATCCCCAGTGTCTGTAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR TCA 90 bp AAAAGAGAGAAATTGAAGATGACTATGAGGTTGCCTGAGCAACTAAATGGATGGGAAGGGACTCATGGGTaGGAAATGCAACTGCCAAAT +
Preference number: 4 (lower is better)
Translates to: KREKLKMTMRLPEQLNGWEGTHG*EMQLPN
Trigger: ATTTGGCAGTTGCATTTCTCACCCATGAGTCCCTTC...CCATCCATTTAGTTGCTCAGGCAACCTCATAGTCATCTTCAATTTCTCTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR TCA 90 bp AATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACATCTGAGAGCTTTTGCCATTCTCCAGAGGACTaGTCTCTTCTGTTGAAATCT +
Preference number: 4 (lower is better)
Translates to: NLHTHFLSNALDTSESFCHSPED*SLLLKS
Trigger: AGATTTCAACAGAAGAGATCAGTCCTCTGGAGAATG...GCAAAAGCTCTCAGATGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp GACACATTATTTATGAATTCTGTCAAATGTGACTCTTCCTACCCAACACCTTCCGGAGGTGAAGAACCGTaGAATGGTGATAGCCGATTA +
Preference number: 4 (lower is better)
Translates to: DTLFMNSVKCDSSYPTPSGGEEP*NGDSRL
Trigger: TAATCGGCTATCACCATTTCACGGTTCTTCACCTCC...GGAAGGTGTTGGGTAGGAAGAGTCACATTTGACAGAATTCATAAATAATGTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp GACACATTATTTATGAATTCTGTCAAATGTGACTCTTCCTACCCAACACCTTCCATCAGAGGCTGTGACTaGTTCTGGAATTCCATGTGG +
Preference number: 4 (lower is better)
Translates to: DTLFMNSVKCDSSYPTPSIRGCD*FWNSMW
Trigger: CCACATGGAATTCCAGAATCAGTCACAGCCTCTGAT...GGAAGGTGTTGGGTAGGAAGAGTCACATTTGACAGAATTCATAAATAATGTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp TTCAGGCAGGAGAGAGCTATTATTTCCATTAAGGTGGAAAGGGAATCATACGGAAACTTTCTGGGGTGCTaGAAACAGTGTATGTCTCTA +
Preference number: 4 (lower is better)
Translates to: FRQERAIISIKVERESYGNFLGC*KQCMSL
Trigger: TAGAGACATACACTGTTTTCAGCACCCCAGAAAGTT...TCCGTATGATTCCCTTTCCACCTTAATGGAAATAATAGCTCTCTCCTGCCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp ATGCAAGACTTATATGCAGAAAACTTTCACACGCCATTGAAGGGCACAAAAGCAGGGAGGAGCAAAGAGTaGGAAATAAAGGTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: MQDLYAENFHTPLKGTKAGRSKE*EIKVPV
Trigger: AACAGGAACCTTTATTTCTCACTCTTTGCTCCTCCC...TGCTTTTGTGCCCTTCAATGGCGTGTGAAAGTTTTCTGCATATAAGTCTTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR GCA 90 bp TTCAGGCAGGAGAGAGCTATTATTTCCATTAAGGTGGAAAGGGAATCATACGGAAGTAATATCCATCACTaGCACTCCAAAAGGTCTTCG +
Preference number: 4 (lower is better)
Translates to: FRQERAIISIKVERESYGSNIHH*HSKRSS
Trigger: CGAAGACCTTTTGGAGTGGCAGTGATGGATATTACT...TCCGTATGATTCCCTTTCCACCTTAATGGAAATAATAGCTCTCTCCTGCCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp CCACACCCCTTCCAGAATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACAGTGATTCACTTCCTTTaGTGCAATCACTTTATTCAA +
Preference number: 4 (lower is better)
Translates to: PHPFQNLHTHFLSNALDTVIHFL*CNHFIQ
Trigger: TTGAATAAAGTGATTGCAGCAAAGGAAGTGAATCAC...TGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATTCTGGAAGGGGTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp AAAAGAGAGAAATTGAAGATGACTATGAGGTTGCCTGAGCAACTAAATGGATGGGGAGAGTTTCACATATaGCAAAGTGGCGCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: KREKLKMTMRLPEQLNGWGEFHI*QSGAEV
Trigger: CACTTCAGCGCCACTTTGGCATATGTGAAACTCTCC...CCATCCATTTAGTTGCTCAGGCAACCTCATAGTCATCTTCAATTTCTCTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR GCA 90 bp ATGAGAAAGGAAGCCACAAATTTGAAGGGCCTTATAAATACCTTTCACAAAATGATGTTGCTCAGAAGCTaGGAGCTTGCCTCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: MRKEATNLKGLINTFHKMMLLRS*ELASWS
Trigger: TGACCACGAGGCAAGCTCGCAGCTTCTGAGCAACAT...CATTTTGTGAAAGGTATTTATAAGGCCCTTCAAATTTGTGGCTTCCTTTCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp CTGAGTTTCCCAAATGAAAAGACCTACAGTTACAGACACTGGGGATTTCTTTCTTTCTCACAGTCTCGGTaGAAATCTCGAAGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: LSFPNEKTYSYRHWGFLSFSQSR*KSRSLY
Trigger: GTACAAGCTTCGAGATTTGCACCGAGACTGTGAGAA...AGAAAGAAATCCCCAGTGTCTGTAACTGTAGGTCTTTTCATTTGGGAAACTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR GCA 90 bp CAACTGCCAAATGGAAGTAATTGTTCCAGAGCTGAAGTTCAAAGCTTGCCTGATAAAGCAGTTCAGTCTTaGTGGAGTCATACATATGCC +
Preference number: 4 (lower is better)
Translates to: QLPNGSNCSRAEVQSLPDKAVQS*WSHTYA
Trigger: GGCATATGTATGACTCCAGCAAGACTGAACTGCTTT...ATCAGGCAAGCTTTGAACTTCAGCTCTGGAACAATTACTTCCATTTGGCAGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CCA 90 bp TATGACTCTGGCTGGTTTGTGGAATTCTCAGTTTGTTCTACTTGTCTGCAGTGGTCTGTAAACACTGCTTaGAGGTTATTGAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: YDSGWFVEFSVCSTCLQWSVNTA*RLLSFS
Trigger: AGAGAAGCTCAATAACCTCCAAGCAGTGTTTACAGA...CCACTGCAGACAAGTAGAACAAACTGAGAATTCCACAAACCAGCCAGAGTCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR CCA 90 bp CCACACCCCTTCCAGAATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACATTATTTCCATTAAGGTaGAAAGGGAATCATACGGAA +
Preference number: 4 (lower is better)
Translates to: PHPFQNLHTHFLSNALDTLFPLR*KGNHTE
Trigger: TTCCGTATGATTCCCTTTCCACCTTAATGGAAATAA...TGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATTCTGGAAGGGGTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR CAA 72 bp GCTCTGCCCATAAAATCTCAAGTAGAGCACTCGGGATaGGATGATGAATCTAAACAAGTACTTCAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: ALPIKSQVEHSG*DDESKQVLQGF
Trigger: AAAGCCTTGAAGTACTTGTTTAGATTCATCATCCAATCCCGAGTGCTCTACTTGAGATTTTATGGGCAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR TCA 90 bp ATGCAAGACTTATATGCAGAAAACTTTCACACGCCATTGAAGGGCACAAAAGCATCCATCGCAATTTGCTaGAAGGGAATAAAATGCTGC +
Preference number: 4 (lower is better)
Translates to: MQDLYAENFHTPLKGTKASIAIC*KGIKCC
Trigger: GCAGCATTTTATTCCCTTTCAGCAAATTGCGATGGA...TGCTTTTGTGCCCTTCAATGGCGTGTGAAAGTTTTCTGCATATAAGTCTTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR TCA 90 bp CTGAGTTTCCCAAATGAAAAGACCTACAGTTACAGACACTGGGGATTTCTTTCTCACTTTATTCAAGACTaGAGTGAGTGGCTCATTCTC +
Preference number: 4 (lower is better)
Translates to: LSFPNEKTYSYRHWGFLSHFIQD*SEWLIL
Trigger: GAGAATGAGCCACTCACTTCAGTCTTGAATAAAGTG...AGAAAGAAATCCCCAGTGTCTGTAACTGTAGGTCTTTTCATTTGGGAAACTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR TCA 90 bp TTCAGGCAGGAGAGAGCTATTATTTCCATTAAGGTGGAAAGGGAATCATACGGATGTCCATCAGCATATTaGAAGCAAGAAATAACTGGC +
Preference number: 4 (lower is better)
Translates to: FRQERAIISIKVERESYGCPSAY*KQEITG
Trigger: GCCAGTTATTTCTTGCTTTCAATATGCTGATGGACA...TCCGTATGATTCCCTTTCCACCTTAATGGAAATAATAGCTCTCTCCTGCCTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp AGTTACAGACACTGGGGATTTCTTTCTGATCATACAATGGCGAAATCCACAGTCTGTCCATCAGCATATTaGAAGCAAGAAATAACTGGC +
Preference number: 4 (lower is better)
Translates to: SYRHWGFLSDHTMAKSTVCPSAY*KQEITG
Trigger: GCCAGTTATTTCTTGCTTTCAATATGCTGATGGACA...GACTGTGGATTTCGCCATTGTATGATCAGAAAGAAATCCCCAGTGTCTGTAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR TCA 90 bp TCTCAAAGCCTGCTTTATATCTTGTTCTACATTAGGAAATTGCAGTGTGGCTGCAGTTCAAAGCTTGCCTaGTCCATGAAGAATCTTGTG +
Preference number: 4 (lower is better)
Translates to: SQSLLYILFYIRKLQCGCSSKLA*SMKNLV
Trigger: CACAAGATTCTTCATGGATCAGGCAAGCTTTGAACT...GCAGCCACACTGCAATTTCCTAATGTAGAACAAGATATAAAGCAGGCTTTGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp ATGAGAAAGGAAGCCACAAATTTGAAGGGCCTTATAAATACCTTTCACAAAATGTTAACAACCTCAGGCTaGAGTCCTCTCGCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: MRKEATNLKGLINTFHKMLTTSG*SPLASH
Trigger: ATGAGAGGCGAGAGGACTTCAGCCTGAGGTTGTTAA...CATTTTGTGAAAGGTATTTATAAGGCCCTTCAAATTTGTGGCTTCCTTTCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp AAAAGAGAGAAATTGAAGATGACTATGAGGTTGCCTGAGCAACTAAATGGATGGTCCTTTGGGAAGTGGTaGGGCATAGGAATCCTATTT +
Preference number: 4 (lower is better)
Translates to: KREKLKMTMRLPEQLNGWSFGKW*GIGILF
Trigger: AAATAGGATTCCTATGCCTCACCACTTCCCAAAGGA...CCATCCATTTAGTTGCTCAGGCAACCTCATAGTCATCTTCAATTTCTCTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR TCA 90 bp ATGCAAGACTTATATGCAGAAAACTTTCACACGCCATTGAAGGGCACAAAAGCACTGGGGATTTCTTTCTaGTCATACAATGGCGAAATC +
Preference number: 4 (lower is better)
Translates to: MQDLYAENFHTPLKGTKALGISF*SYNGEI
Trigger: GATTTCGCCATTGTATGATCAGAAAGAAATCCCCAG...TGCTTTTGTGCCCTTCAATGGCGTGTGAAAGTTTTCTGCATATAAGTCTTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR TCA 90 bp CTGAGTTTCCCAAATGAAAAGACCTACAGTTACAGACACTGGGGATTTCTTTCTCCTGAGTTTCCCAAATaGAAAGACCTACAGTTACAG +
Preference number: 4 (lower is better)
Translates to: LSFPNEKTYSYRHWGFLSPEFPK*KDLQLQ
Trigger: CTGTAACTGTAGGTCTTTTCATTTGGGAAACTCAGG...AGAAAGAAATCCCCAGTGTCTGTAACTGTAGGTCTTTTCATTTGGGAAACTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR TCA 90 bp TATGACTCTGGCTGGTTTGTGGAATTCTCAGTTTGTTCTACTTGTCTGCAGTGGATTAACTCAAATATATaGCTCTGGCTGGTTTGTGGA +
Preference number: 4 (lower is better)
Translates to: YDSGWFVEFSVCSTCLQWINSNI*LWLVCG
Trigger: TCCACAAACCAGCCAGAGTCATATATTTGAGTTAAT...CCACTGCAGACAAGTAGAACAAACTGAGAATTCCACAAACCAGCCAGAGTCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR GCA 90 bp TCTCTAGTCATAAATAATCATGTAAAAGACCTCAAAGGAAACCACCATTTGGAGACTGTGTCACCGATCTaGAAGGAGAGCTCCACATCT +
Preference number: 4 (lower is better)
Translates to: SLVINNHVKDLKGNHHLETVSPI*KESSTS
Trigger: AGATGTGGAGCTCTCCTTGCAGATCGGTGACACAGT...CTCCAAATGGTGGTTTCCTTTGAGGTCTTTTACATGATTATTTATGACTAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp AATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACATCTGAGAGCTTTTGCAAGGTCTGTAAACACTaGTTGGAGGTTATTGAGCTT +
Preference number: 4 (lower is better)
Translates to: NLHTHFLSNALDTSESFCKVCKH*LEVIEL
Trigger: AAGCTCAATAACCTCCAAGCAGTGTTTACAGACCTT...GCAAAAGCTCTCAGATGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp CCTGTTACCGCCTTGTTCAGTTTGAGCTGCATATTGGCCAATCAAAGTTTATATAGTAATATCCATCACTaGCACTCCAAAAGGTCTTCG +
Preference number: 4 (lower is better)
Translates to: PVTALFSLSCILANQSLYSNIHH*HSKRSS
Trigger: CGAAGACCTTTTGGAGTGGCAGTGATGGATATTACT...ATATAAACTTTGATTGGCCAATATGCAGCTCAAACTGAACAAGGCGGTAACAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR GCA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTAATAATAAATACCAGTaGGTCAAACACAAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPNNKYQ*VKHKEV
Trigger: GACTTCCTTGTGTTTGACGCACTGGTATTTATTATT...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR GCA 90 bp CCTGTTACCGCCTTGTTCAGTTTGAGCTGCATATTGGCCAATCAAAGTTTATATCTTGCTGGAGTCATCTaGATTAGCCACATAGAAGTT +
Preference number: 4 (lower is better)
Translates to: PVTALFSLSCILANQSLYLAGVI*ISHIEV
Trigger: AACTTCTATGTGGCTAATGCAGATGACTCCAGCAAG...ATATAAACTTTGATTGGCCAATATGCAGCTCAAACTGAACAAGGCGGTAACAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR GCA 90 bp AATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACATCTGAGAGCTTTTGCACTGTCGAAAAAGAGTaGTCTCTACTATCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: NLHTHFLSNALDTSESFCTVEKE*SLLSWS
Trigger: TGACCAAGATAGTAGAGAGCACTCTTTTTCGACAGT...GCAAAAGCTCTCAGATGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp AGTTACAGACACTGGGGATTTCTTTCTGATCATACAATGGCGAAATCCACAGTCACTGTCGAAAAAGAGTaGTCTCTACTATCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: SYRHWGFLSDHTMAKSTVTVEKE*SLLSWS
Trigger: TGACCAAGATAGTAGAGAGCACTCTTTTTCGACAGT...GACTGTGGATTTCGCCATTGTATGATCAGAAAGAAATCCCCAGTGTCTGTAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR GCA 90 bp TCTCTAGTCATAAATAATCATGTAAAAGACCTCAAAGGAAACCACCATTTGGAGCTGTCGTCCATTTGCTaGAGCAGGGCAATCATGCAA +
Preference number: 4 (lower is better)
Translates to: SLVINNHVKDLKGNHHLELSSIC*SRAIMQ
Trigger: TTGCATGATTGCCCTGCTGCAGCAAATGGACGACAG...CTCCAAATGGTGGTTTCCTTTGAGGTCTTTTACATGATTATTTATGACTAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp ATGCAAGACTTATATGCAGAAAACTTTCACACGCCATTGAAGGGCACAAAAGCACTCATGGGTGAGAAATaGAACTGCCAAATGGAAGTA +
Preference number: 4 (lower is better)
Translates to: MQDLYAENFHTPLKGTKALMGEK*NCQMEV
Trigger: TACTTCCATTTGGCAGTTGCATTTCTCACCCATGAG...TGCTTTTGTGCCCTTCAATGGCGTGTGAAAGTTTTCTGCATATAAGTCTTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR GCA 90 bp ATGAGAAAGGAAGCCACAAATTTGAAGGGCCTTATAAATACCTTTCACAAAATGTCAGCACGTTCACAGTaGAGCTCATACGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: MRKEATNLKGLINTFHKMSARSQ*SSYGSP
Trigger: AGGAGAACCGTATGAGCTGCACTGTGAACGTGCTGA...CATTTTGTGAAAGGTATTTATAAGGCCCTTCAAATTTGTGGCTTCCTTTCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp ATGGGCATGTGGGAACTTTCTGGGGTGCTGAAAACAGTGTATGTCTCTATCTTATCTTCAGGATGCTCCTaGAAGTACTTTTCTGTAAAA +
Preference number: 4 (lower is better)
Translates to: MGMWELSGVLKTVYVSILSSGCS*KYFSVK
Trigger: TTTTACAGAAAAGTACTTGCAGGAGCATCCTGAAGA...TAAGATAGAGACATACACTGTTTTCAGCACCCCAGAAAGTTCCCACATGCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp CCATCTCTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAAAAAGCTTTCTGCTTTaGCACAAATATCTAAGTAGC +
Preference number: 4 (lower is better)
Translates to: PSLPRCNMGWDQCVHVRKKSFLL*HKYLSS
Trigger: GCTACTTAGATATTTGTGGCAAAGCAGAAAGCTTTT...TTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAGAGATGG
41% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTTGTTGTCTCAAAGCCTaGTTTATATCTTGTTCTACA +
Preference number: 4 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPCCLKA*FISCST
Trigger: TGTAGAACAAGATATAAAGCAGGCTTTGAGACAACA...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp AATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACATCTGAGAGCTTTTGCATTCCGAACATCTCCTaGCAGTATGATTTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: NLHTHFLSNALDTSESFCIPNIS*QYDFRK
Trigger: TTTCCTGAAATCATACTGCCAGGAGATGTTCGGAAT...GCAAAAGCTCTCAGATGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp AGTTACAGACACTGGGGATTTCTTTCTGATCATACAATGGCGAAATCCACAGTCAGAAGTTCAGTACCTTaGAGAGTTTCACATATGCCA +
Preference number: 4 (lower is better)
Translates to: SYRHWGFLSDHTMAKSTVRSSVP*RVSHMP
Trigger: TGGCATATGTGAAACTCTCCAAGGTACTGAACTTCT...GACTGTGGATTTCGCCATTGTATGATCAGAAAGAAATCCCCAGTGTCTGTAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CCA 90 bp AATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACATCTGAGAGCTTTTGCCAATTTTGTTGCGCTTaGCTTGTGAGAAGGTTTCAA +
Preference number: 4 (lower is better)
Translates to: NLHTHFLSNALDTSESFCQFCCA*LVRRFQ
Trigger: TTGAAACCTTCTCACAAGCCAAGCGCAACAAAATTG...GCAAAAGCTCTCAGATGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp AGTTACAGACACTGGGGATTTCTTTCTGATCATACAATGGCGAAATCCACAGTCCAATTTTGTTGCGCTTaGCTTGTGAGAAGGTTTCAA +
Preference number: 4 (lower is better)
Translates to: SYRHWGFLSDHTMAKSTVQFCCA*LVRRFQ
Trigger: TTGAAACCTTCTCACAAGCCAAGCGCAACAAAATTG...GACTGTGGATTTCGCCATTGTATGATCAGAAAGAAATCCCCAGTGTCTGTAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CCA 90 bp CCATCTCTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAATCATTCTCAAACATATaGAAATTGCCATTTCCACTG +
Preference number: 4 (lower is better)
Translates to: PSLPRCNMGWDQCVHVRKSFSNI*KLPFPL
Trigger: CAGTGGAAATGGCAATTTCCATATGTTTGAGAATGA...TTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAGAGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp TTCAGGCAGGAGAGAGCTATTATTTCCATTAAGGTGGAAAGGGAATCATACGGAACTGCTGCACTTCATTaGCTCTGTAGTAGTTTAAGA +
Preference number: 4 (lower is better)
Translates to: FRQERAIISIKVERESYGTAALH*LCSSLR
Trigger: TCTTAAACTACTACAGAGCCAATGAAGTGCAGCAGT...TCCGTATGATTCCCTTTCCACCTTAATGGAAATAATAGCTCTCTCCTGCCTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp TCTCTAGTCATAAATAATCATGTAAAAGACCTCAAAGGAAACCACCATTTGGAGTTCTGGAATTCCATGTaGACTGGAAGGGAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: SLVINNHVKDLKGNHHLEFWNSM*TGREVA
Trigger: TGCCACCTCCCTTCCAGTCCACATGGAATTCCAGAA...CTCCAAATGGTGGTTTCCTTTGAGGTCTTTTACATGATTATTTATGACTAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp ATGAGAAAGGAAGCCACAAATTTGAAGGGCCTTATAAATACCTTTCACAAAATGCAATGCAGGTTTTCCTaGGTGGGGGTAAAGGATCAC +
Preference number: 4 (lower is better)
Translates to: MRKEATNLKGLINTFHKMQCRFS*VGVKDH
Trigger: GTGATCCTTTACCCCCACCCAGGAAAACCTGCATTG...CATTTTGTGAAAGGTATTTATAAGGCCCTTCAAATTTGTGGCTTCCTTTCTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp AATTCCATGTGGACTGGAAGGGAGGTGGCATGGCCTCAAAATTCTATCAAAGAGTTTAATGGATTTCCTTaGCAGAAGAAAATGACTGCA +
Preference number: 4 (lower is better)
Translates to: NSMWTGREVAWPQNSIKEFNGFP*QKKMTA
Trigger: TGCAGTCATTTTCTTCTGCCAAGGAAATCCATTAAA...CTCTTTGATAGAATTTTGAGGCCATGCCACCTCCCTTCCAGTCCACATGGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp GACACATTATTTATGAATTCTGTCAAATGTGACTCTTCCTACCCAACACCTTCCATACCTTTCACAAAATaGCACCATGGGCATGTGGGA +
Preference number: 4 (lower is better)
Translates to: DTLFMNSVKCDSSYPTPSIPFTK*HHGHVG
Trigger: TCCCACATGCCCATGGTGCCATTTTGTGAAAGGTAT...GGAAGGTGTTGGGTAGGAAGAGTCACATTTGACAGAATTCATAAATAATGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp AGTTACAGACACTGGGGATTTCTTTCTGATCATACAATGGCGAAATCCACAGTCGCAGACTCGAACAAATaGAAAGTCATACCATGCTTT +
Preference number: 4 (lower is better)
Translates to: SYRHWGFLSDHTMAKSTVADSNK*KVIPCF
Trigger: AAAGCATGGTATGACTTTCCATTTGTTCGAGTCTGC...GACTGTGGATTTCGCCATTGTATGATCAGAAAGAAATCCCCAGTGTCTGTAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR TCA 90 bp CTGAGTTTCCCAAATGAAAAGACCTACAGTTACAGACACTGGGGATTTCTTTCTTTGTCAGGAATGCTTTaGATGAATTTGCAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: LSFPNEKTYSYRHWGFLSLSGML*MNLQKS
Trigger: GCTCTTCTGCAAATTCATTCAAAGCATTCCTGACAA...AGAAAGAAATCCCCAGTGTCTGTAACTGTAGGTCTTTTCATTTGGGAAACTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR TCA 90 bp TCTCAAAGCCTGCTTTATATCTTGTTCTACATTAGGAAATTGCAGTGTGGCTGCCTACCAAAGTGTACTTaGTATCCATCTCTTCCAAGA +
Preference number: 4 (lower is better)
Translates to: SQSLLYILFYIRKLQCGCLPKCT*YPSLPR
Trigger: TCTTGGAAGAGATGGATATCAAGTACACTTTGGTAG...GCAGCCACACTGCAATTTCCTAATGTAGAACAAGATATAAAGCAGGCTTTGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp ATGAGAAAGGAAGCCACAAATTTGAAGGGCCTTATAAATACCTTTCACAAAATGGACAGGCCCAGGGACTaGCTACAAATTGACTTGTTA +
Preference number: 4 (lower is better)
Translates to: MRKEATNLKGLINTFHKMDRPRD*LQIDLL
Trigger: TAACAAGTCAATTTGTAGTCAGTCCCTGGGCCTGTC...CATTTTGTGAAAGGTATTTATAAGGCCCTTCAAATTTGTGGCTTCCTTTCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp ATGCAAGACTTATATGCAGAAAACTTTCACACGCCATTGAAGGGCACAAAAGCAGAGAGTTTACCTTCCTaGGTTTCCCAAATGAAAAGA +
Preference number: 4 (lower is better)
Translates to: MQDLYAENFHTPLKGTKAESLPS*VSQMKR
Trigger: TCTTTTCATTTGGGAAACTCAGGAAGGTAAACTCTC...TGCTTTTGTGCCCTTCAATGGCGTGTGAAAGTTTTCTGCATATAAGTCTTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR GCA 90 bp TCTCTAGTCATAAATAATCATGTAAAAGACCTCAAAGGAAACCACCATTTGGAGCACAGGTGTGCTTCTTaGCTTCCTTCAGCTCCATAT +
Preference number: 4 (lower is better)
Translates to: SLVINNHVKDLKGNHHLEHRCAS*LPSAPY
Trigger: ATATGGAGCTGAAGGAAGGCAAGAAGCACACCTGTG...CTCCAAATGGTGGTTTCCTTTGAGGTCTTTTACATGATTATTTATGACTAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp TTCAGGCAGGAGAGAGCTATTATTTCCATTAAGGTGGAAAGGGAATCATACGGAATTTGTATTCTGAAATaGCTTCATATCCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: FRQERAIISIKVERESYGICILK*LHIQHQ
Trigger: CTGGTGCTGGATATGAAGGCATTTCAGAATACAAAT...TCCGTATGATTCCCTTTCCACCTTAATGGAAATAATAGCTCTCTCCTGCCTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp AGTTACAGACACTGGGGATTTCTTTCTGATCATACAATGGCGAAATCCACAGTCATTTGTATTCTGAAATaGCTTCATATCCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: SYRHWGFLSDHTMAKSTVICILK*LHIQHQ
Trigger: CTGGTGCTGGATATGAAGGCATTTCAGAATACAAAT...GACTGTGGATTTCGCCATTGTATGATCAGAAAGAAATCCCCAGTGTCTGTAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR GCA 90 bp ATGCAAGACTTATATGCAGAAAACTTTCACACGCCATTGAAGGGCACAAAAGCAGACCAGGTTTTTGGATaGTTGAAGCTCTTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: MQDLYAENFHTPLKGTKADQVFG*LKLFFF
Trigger: GAAGAAAAAGAGCTTCAAGCATCCAAAAACCTGGTC...TGCTTTTGTGCCCTTCAATGGCGTGTGAAAGTTTTCTGCATATAAGTCTTGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR GCA 90 bp AGCACGGAGAAAAACCCTGTTTTGAGTCATATTCATCACCATCCAATCTTTGGCAGTACAGGATTAAAATaGTGGAACTTGATGTCTCCT +
Preference number: 4 (lower is better)
Translates to: STEKNPVLSHIHHHPIFGSTGLK*WNLMSP
Trigger: AGGAGACATCAAGTTCCAGCATTTTAATCCTGTACT...GCCAAAGATTGGATGGTGATGAATATGACTCAAAACAGGGTTTTTCTCCGTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR GCA 90 bp AGTTACAGACACTGGGGATTTCTTTCTGATCATACAATGGCGAAATCCACAGTCGGTGAGAAATGCAACTaGCAAATGGAAGTAATTGTT +
Preference number: 4 (lower is better)
Translates to: SYRHWGFLSDHTMAKSTVGEKCN*QMEVIV
Trigger: AACAATTACTTCCATTTGGCAGTTGCATTTCTCACC...GACTGTGGATTTCGCCATTGTATGATCAGAAAGAAATCCCCAGTGTCTGTAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR GCA 90 bp CCTGGGGGAACCCTATCTATCTACTGTTCAAAGCCAACAACAATGGCACTATTAGGTCCTGGAACCAATTaGCTTTTTAGATTTATTTTG +
Preference number: 4 (lower is better)
Translates to: PGGTLSIYCSKPTTMALLGPGTN*LFRFIL
Trigger: CAAAATAAATCTAAAAAGGCAATTGGTTCCAGGACC...TAATAGTGCCATTGTTGTTGGCTTTGAACAGTAGATAGATAGGGTTCCCCCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000410074.5
CDS-3UTR GCA 90 bp AGTTACAGACACTGGGGATTTCTTTCTGATCATACAATGGCGAAATCCACAGTCTTGTTCAGTTTGAGCTaGATATTGGCCAATCAAAGT +
Preference number: 4 (lower is better)
Translates to: SYRHWGFLSDHTMAKSTVLFSLS*ILANQS
Trigger: ACTTTGATTGGCCAATATGCAGCTCAAACTGAACAA...GACTGTGGATTTCGCCATTGTATGATCAGAAAGAAATCCCCAGTGTCTGTAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CCA 90 bp TCTCAAAGCCTGCTTTATATCTTGTTCTACATTAGGAAATTGCAGTGTGGCTGCAGAAGTTCAGTACCTTaGAGAGTTTCACATATGCCA +
Preference number: 4 (lower is better)
Translates to: SQSLLYILFYIRKLQCGCRSSVP*RVSHMP
Trigger: TGGCATATGTGAAACTCTCCAAGGTACTGAACTTCT...GCAGCCACACTGCAATTTCCTAATGTAGAACAAGATATAAAGCAGGCTTTGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp TCTCAAAGCCTGCTTTATATCTTGTTCTACATTAGGAAATTGCAGTGTGGCTGCATGAATTTGATTTTGTaGGGACCCAGGTTATACCAC +
Preference number: 4 (lower is better)
Translates to: SQSLLYILFYIRKLQCGCMNLIL*GPRLYH
Trigger: GTGGTATAACCTGGGTCCCCACAAAATCAAATTCAT...GCAGCCACACTGCAATTTCCTAATGTAGAACAAGATATAAAGCAGGCTTTGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp CCTGTTACCGCCTTGTTCAGTTTGAGCTGCATATTGGCCAATCAAAGTTTATATATGAATTTGATTTTGTaGGGACCCAGGTTATACCAC +
Preference number: 4 (lower is better)
Translates to: PVTALFSLSCILANQSLYMNLIL*GPRLYH
Trigger: GTGGTATAACCTGGGTCCCCACAAAATCAAATTCAT...ATATAAACTTTGATTGGCCAATATGCAGCTCAAACTGAACAAGGCGGTAACAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CCA 90 bp TCTCTAGTCATAAATAATCATGTAAAAGACCTCAAAGGAAACCACCATTTGGAGGCCTTTGTGCTTTTCTaGTTGGGCTCATCAAATCGG +
Preference number: 4 (lower is better)
Translates to: SLVINNHVKDLKGNHHLEAFVLF*LGSSNR
Trigger: CCGATTTGATGAGCCCAACCAGAAAAGCACAAAGGC...CTCCAAATGGTGGTTTCCTTTGAGGTCTTTTACATGATTATTTATGACTAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR CAA 72 bp AATAATCATGTAAAAGACCTCAAAGGAAACCACCATTaGGAGAAGGGCTGTATGTGCAGAACTAACTTGCAC +
Preference number: 4 (lower is better)
Translates to: NNHVKDLKGNHH*EKGCMCRTNLH
Trigger: GTGCAAGTTAGTTCTGCACATACAGCCCTTCTCCAAATGGTGGTTTCCTTTGAGGTCTTTTACATGATTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR CAA 72 bp GACTCTTCCAGCTTGGAAAGAGTAAACAAAGGTAGGTaGTTGTCTCAAAGCCTGCTTTATATCTTGTTCTAC +
Preference number: 4 (lower is better)
Translates to: DSSSLERVNKGR*LSQSLLYILFY
Trigger: GTAGAACAAGATATAAAGCAGGCTTTGAGACAACAACCTACCTTTGTTTACTCTTTCCAAGCTGGAAGAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
3UTR CAA 72 bp ATGCAAGACTTATATGCAGAAAACTTTCACACGCCATaGAAGGGCACAAAAGCAGACTCGAACAAATGGAAA +
Preference number: 4 (lower is better)
Translates to: MQDLYAENFHTP*KGTKADSNKWK
Trigger: TTTCCATTTGTTCGAGTCTGCTTTTGTGCCCTTCAATGGCGTGTGAAAGTTTTCTGCATATAAGTCTTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR TCA 90 bp TCTCAAAGCCTGCTTTATATCTTGTTCTACATTAGGAAATTGCAGTGTGGCTGCTCTATCAACCAAGTGTaGAAAATTCTTCTGAACCTG +
Preference number: 4 (lower is better)
Translates to: SQSLLYILFYIRKLQCGCSINQV*KILLNL
Trigger: CAGGTTCAGAAGAATTTTTCACACTTGGTTGATAGA...GCAGCCACACTGCAATTTCCTAATGTAGAACAAGATATAAAGCAGGCTTTGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp CCTGTTACCGCCTTGTTCAGTTTGAGCTGCATATTGGCCAATCAAAGTTTATATAAGGTAAATCTTATATaGCAGCGTGTGACTTCTTCT +
Preference number: 4 (lower is better)
Translates to: PVTALFSLSCILANQSLYKVNLI*QRVTSS
Trigger: AGAAGAAGTCACACGCTGTCATATAAGATTTACCTT...ATATAAACTTTGATTGGCCAATATGCAGCTCAAACTGAACAAGGCGGTAACAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR TCA 90 bp ATGCAAGACTTATATGCAGAAAACTTTCACACGCCATTGAAGGGCACAAAAGCAGATGTCTCCTATCAGTaGAATAATAAATACCAGTGC +
Preference number: 4 (lower is better)
Translates to: MQDLYAENFHTPLKGTKADVSYQ*NNKYQC
Trigger: GCACTGGTATTTATTATTTCACTGATAGGAGACATC...TGCTTTTGTGCCCTTCAATGGCGTGTGAAAGTTTTCTGCATATAAGTCTTGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR TCA 90 bp TCTCAAAGCCTGCTTTATATCTTGTTCTACATTAGGAAATTGCAGTGTGGCTGCAGAAAAACCCTGTTTTaGGTCATATTCATCACCATC +
Preference number: 4 (lower is better)
Translates to: SQSLLYILFYIRKLQCGCRKTLF*VIFITI
Trigger: GATGGTGATGAATATGACTCAAAACAGGGTTTTTCT...GCAGCCACACTGCAATTTCCTAATGTAGAACAAGATATAAAGCAGGCTTTGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp CCTGTTACCGCCTTGTTCAGTTTGAGCTGCATATTGGCCAATCAAAGTTTATATAGAAAAACCCTGTTTTaGGTCATATTCATCACCATC +
Preference number: 4 (lower is better)
Translates to: PVTALFSLSCILANQSLYRKTLF*VIFITI
Trigger: GATGGTGATGAATATGACTCAAAACAGGGTTTTTCT...ATATAAACTTTGATTGGCCAATATGCAGCTCAAACTGAACAAGGCGGTAACAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR TCA 90 bp ATGAGAAAGGAAGCCACAAATTTGAAGGGCCTTATAAATACCTTTCACAAAATGATCAGTGTGTCCACGTaGGAAAAGTACCTAAGTCTC +
Preference number: 4 (lower is better)
Translates to: MRKEATNLKGLINTFHKMISVST*EKYLSL
Trigger: GAGACTTAGGTACTTTTCTCACGTGGACACACTGAT...CATTTTGTGAAAGGTATTTATAAGGCCCTTCAAATTTGTGGCTTCCTTTCTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp TCTCAAAGCCTGCTTTATATCTTGTTCTACATTAGGAAATTGCAGTGTGGCTGCCATATTTCATCTCATTaGAACCTCACAACAACCGAT +
Preference number: 4 (lower is better)
Translates to: SQSLLYILFYIRKLQCGCHISSH*NLTTTD
Trigger: ATCGGTTGTTGTGAGGTTTCAATGAGATGAAATATG...GCAGCCACACTGCAATTTCCTAATGTAGAACAAGATATAAAGCAGGCTTTGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp AGTTACAGACACTGGGGATTTCTTTCTGATCATACAATGGCGAAATCCACAGTCATTCACTTCCTTTGCTaGAATCACTTTATTCAAGAC +
Preference number: 4 (lower is better)
Translates to: SYRHWGFLSDHTMAKSTVIHFLC*NHFIQD
Trigger: GTCTTGAATAAAGTGATTGCAGCAAAGGAAGTGAAT...GACTGTGGATTTCGCCATTGTATGATCAGAAAGAAATCCCCAGTGTCTGTAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR GCA 90 bp GACACATTATTTATGAATTCTGTCAAATGTGACTCTTCCTACCCAACACCTTCCGACCAGGTTTTTGGATaGTTGAAGCTCTTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: DTLFMNSVKCDSSYPTPSDQVFG*LKLFFF
Trigger: GAAGAAAAAGAGCTTCAAGCATCCAAAAACCTGGTC...GGAAGGTGTTGGGTAGGAAGAGTCACATTTGACAGAATTCATAAATAATGTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp CAACTGCCAAATGGAAGTAATTGTTCCAGAGCTGAAGTTCAAAGCTTGCCTGATAATAATAAATACCAGTaGGTCAAACACAAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: QLPNGSNCSRAEVQSLPDNNKYQ*VKHKEV
Trigger: GACTTCCTTGTGTTTGACGCACTGGTATTTATTATT...ATCAGGCAAGCTTTGAACTTCAGCTCTGGAACAATTACTTCCATTTGGCAGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR GCA 90 bp CCTGTTACCGCCTTGTTCAGTTTGAGCTGCATATTGGCCAATCAAAGTTTATATAGTACAGGATTAAAATaGTGGAACTTGATGTCTCCT +
Preference number: 4 (lower is better)
Translates to: PVTALFSLSCILANQSLYSTGLK*WNLMSP
Trigger: AGGAGACATCAAGTTCCAGCATTTTAATCCTGTACT...ATATAAACTTTGATTGGCCAATATGCAGCTCAAACTGAACAAGGCGGTAACAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR GCA 90 bp ATGAGAAAGGAAGCCACAAATTTGAAGGGCCTTATAAATACCTTTCACAAAATGACTCTTTGGCCTTTGTaGTTTTCTGGTTGGGCTCAT +
Preference number: 4 (lower is better)
Translates to: MRKEATNLKGLINTFHKMTLWPL*FSGWAH
Trigger: ATGAGCCCAACCAGAAAAGCACAAAGGCCAAAGAGT...CATTTTGTGAAAGGTATTTATAAGGCCCTTCAAATTTGTGGCTTCCTTTCTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp ATGCAAGACTTATATGCAGAAAACTTTCACACGCCATTGAAGGGCACAAAAGCATATGCAAGACTTATATaGAGAAAACTTTCACACGCC +
Preference number: 4 (lower is better)
Translates to: MQDLYAENFHTPLKGTKAYARLI*RKLSHA
Trigger: GGCGTGTGAAAGTTTTCTGCATATAAGTCTTGCATA...TGCTTTTGTGCCCTTCAATGGCGTGTGAAAGTTTTCTGCATATAAGTCTTGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CCA 90 bp AAAAGAGAGAAATTGAAGATGACTATGAGGTTGCCTGAGCAACTAAATGGATGGATTCCGAACATCTCCTaGCAGTATGATTTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: KREKLKMTMRLPEQLNGWIPNIS*QYDFRK
Trigger: TTTCCTGAAATCATACTGCCAGGAGATGTTCGGAAT...CCATCCATTTAGTTGCTCAGGCAACCTCATAGTCATCTTCAATTTCTCTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CCA 90 bp TCTCAAAGCCTGCTTTATATCTTGTTCTACATTAGGAAATTGCAGTGTGGCTGCTTGTGTTTAATGTTCTaGGAGTTGGAACGCCAATTT +
Preference number: 4 (lower is better)
Translates to: SQSLLYILFYIRKLQCGCLCLMF*ELERQF
Trigger: AAATTGGCGTTCCAACTCCCAGAACATTAAACACAA...GCAGCCACACTGCAATTTCCTAATGTAGAACAAGATATAAAGCAGGCTTTGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp ATGCAAGACTTATATGCAGAAAACTTTCACACGCCATTGAAGGGCACAAAAGCATCACCATCCAATCTTTaGCATAGACATTCTTTCCAA +
Preference number: 4 (lower is better)
Translates to: MQDLYAENFHTPLKGTKASPSNL*HRHSFQ
Trigger: TTGGAAAGAATGTCTATGCCAAAGATTGGATGGTGA...TGCTTTTGTGCCCTTCAATGGCGTGTGAAAGTTTTCTGCATATAAGTCTTGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CCA 90 bp CCTGTTACCGCCTTGTTCAGTTTGAGCTGCATATTGGCCAATCAAAGTTTATATTACAGTTACAGACACTaGGGATTTCTTTCTGATCAT +
Preference number: 4 (lower is better)
Translates to: PVTALFSLSCILANQSLYYSYRH*GFLSDH
Trigger: ATGATCAGAAAGAAATCCCCAGTGTCTGTAACTGTA...ATATAAACTTTGATTGGCCAATATGCAGCTCAAACTGAACAAGGCGGTAACAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR TCA 90 bp ATGAGAAAGGAAGCCACAAATTTGAAGGGCCTTATAAATACCTTTCACAAAATGCACTTTATTCAAGACTaGAGTGAGTGGCTCATTCTC +
Preference number: 4 (lower is better)
Translates to: MRKEATNLKGLINTFHKMHFIQD*SEWLIL
Trigger: GAGAATGAGCCACTCACTTCAGTCTTGAATAAAGTG...CATTTTGTGAAAGGTATTTATAAGGCCCTTCAAATTTGTGGCTTCCTTTCTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp AAAAGAGAGAAATTGAAGATGACTATGAGGTTGCCTGAGCAACTAAATGGATGGTCTATCAACCAAGTGTaGAAAATTCTTCTGAACCTG +
Preference number: 4 (lower is better)
Translates to: KREKLKMTMRLPEQLNGWSINQV*KILLNL
Trigger: CAGGTTCAGAAGAATTTTTCACACTTGGTTGATAGA...CCATCCATTTAGTTGCTCAGGCAACCTCATAGTCATCTTCAATTTCTCTCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR TCA 90 bp AAAAGAGAGAAATTGAAGATGACTATGAGGTTGCCTGAGCAACTAAATGGATGGAGAACTTCAGCAAACTaGTTTATAGCACGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: KREKLKMTMRLPEQLNGWRTSAN*FIARRK
Trigger: TTTTCTCCGTGCTATAAATCAGTTTGCTGAAGTTCT...CCATCCATTTAGTTGCTCAGGCAACCTCATAGTCATCTTCAATTTCTCTCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR TCA 90 bp TCTCTAGTCATAAATAATCATGTAAAAGACCTCAAAGGAAACCACCATTTGGAGATAGACACACATACCTaGAAGCAGCCAATCTCCATT +
Preference number: 4 (lower is better)
Translates to: SLVINNHVKDLKGNHHLEIDTHT*KQPISI
Trigger: AATGGAGATTGGCTGCTTTCAGGTATGTGTGTCTAT...CTCCAAATGGTGGTTTCCTTTGAGGTCTTTTACATGATTATTTATGACTAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp AAAAGAGAGAAATTGAAGATGACTATGAGGTTGCCTGAGCAACTAAATGGATGGAAGAATATTAATAGCTaGGAACAAAACTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: KREKLKMTMRLPEQLNGWKNINS*EQNWRQ
Trigger: CTGCCTCCAGTTTTGTTCTCAGCTATTAATATTCTT...CCATCCATTTAGTTGCTCAGGCAACCTCATAGTCATCTTCAATTTCTCTCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR GCA 90 bp CCTGTTACCGCCTTGTTCAGTTTGAGCTGCATATTGGCCAATCAAAGTTTATATGTGATTCACTTCCTTTaGTGCAATCACTTTATTCAA +
Preference number: 4 (lower is better)
Translates to: PVTALFSLSCILANQSLYVIHFL*CNHFIQ
Trigger: TTGAATAAAGTGATTGCAGCAAAGGAAGTGAATCAC...ATATAAACTTTGATTGGCCAATATGCAGCTCAAACTGAACAAGGCGGTAACAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR GCA 90 bp ATGCAAGACTTATATGCAGAAAACTTTCACACGCCATTGAAGGGCACAAAAGCAAATAATAAATACCAGTaGGTCAAACACAAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: MQDLYAENFHTPLKGTKANNKYQ*VKHKEV
Trigger: GACTTCCTTGTGTTTGACGCACTGGTATTTATTATT...TGCTTTTGTGCCCTTCAATGGCGTGTGAAAGTTTTCTGCATATAAGTCTTGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR GCA 90 bp ATGAGAAAGGAAGCCACAAATTTGAAGGGCCTTATAAATACCTTTCACAAAATGCATGAGGTGTTTCTTTaGAGTCATCCTCTGACTTCA +
Preference number: 4 (lower is better)
Translates to: MRKEATNLKGLINTFHKMHEVFL*SHPLTS
Trigger: TGAAGTCAGAGGATGACTGCAAAGAAACACCTCATG...CATTTTGTGAAAGGTATTTATAAGGCCCTTCAAATTTGTGGCTTCCTTTCTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp AAAAGAGAGAAATTGAAGATGACTATGAGGTTGCCTGAGCAACTAAATGGATGGTTGTGTTTAATGTTCTaGGAGTTGGAACGCCAATTT +
Preference number: 4 (lower is better)
Translates to: KREKLKMTMRLPEQLNGWLCLMF*ELERQF
Trigger: AAATTGGCGTTCCAACTCCCAGAACATTAAACACAA...CCATCCATTTAGTTGCTCAGGCAACCTCATAGTCATCTTCAATTTCTCTCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CCA 90 bp ATGCAAGACTTATATGCAGAAAACTTTCACACGCCATTGAAGGGCACAAAAGCATCATTCTCAAACATATaGAAATTGCCATTTCCACTG +
Preference number: 4 (lower is better)
Translates to: MQDLYAENFHTPLKGTKASFSNI*KLPFPL
Trigger: CAGTGGAAATGGCAATTTCCATATGTTTGAGAATGA...TGCTTTTGTGCCCTTCAATGGCGTGTGAAAGTTTTCTGCATATAAGTCTTGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
3UTR CAA 72 bp GTTCCTGTTACCGCCTTGTTCAGTTTGAGCTGCATATaGGCCAATCAAAGTTTATATGTAAATCCAAAGTTA +
Preference number: 4 (lower is better)
Translates to: VPVTALFSLSCI*ANQSLYVNPKL
Trigger: TAACTTTGGATTTACATATAAACTTTGATTGGCCAATATGCAGCTCAAACTGAACAAGGCGGTAACAGGAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444569.5
3UTR CAA 72 bp AAGAGCACGCTGAGCTCAACAGGATCAAATACAAGTTaGACATCATTAATTATGCTAGGAAGGTACTTCAAA +
Preference number: 4 (lower is better)
Translates to: KSTLSSTGSNTS*TSLIMLGRYFK
Trigger: TTTGAAGTACCTTCCTAGCATAATTAATGATGTCAAACTTGTATTTGATCCTGTTGAGCTCAGCGTGCTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR TCA 90 bp TCTCTAGTCATAAATAATCATGTAAAAGACCTCAAAGGAAACCACCATTTGGAGGGACTGACTACAAATTaGCTTGTTAAAAGGTGCACA +
Preference number: 4 (lower is better)
Translates to: SLVINNHVKDLKGNHHLEGLTTN*LVKRCT
Trigger: TGTGCACCTTTTAACAAGTCAATTTGTAGTCAGTCC...CTCCAAATGGTGGTTTCCTTTGAGGTCTTTTACATGATTATTTATGACTAGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp ATGAGAAAGGAAGCCACAAATTTGAAGGGCCTTATAAATACCTTTCACAAAATGCAGGTCTTCCACAGTTaGCTCTTTCAAATGGATATA +
Preference number: 4 (lower is better)
Translates to: MRKEATNLKGLINTFHKMQVFHS*LFQMDI
Trigger: TATATCCATTTGAAAGAGGCAACTGTGGAAGACCTG...CATTTTGTGAAAGGTATTTATAAGGCCCTTCAAATTTGTGGCTTCCTTTCTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp TCTATCTACTGTTCAAAGCCAACAACAATGGCACTATTAGCTAGACTGATTTTTGTACACGGGAGGAAATaGAGAGGTTATATGCAAATA +
Preference number: 4 (lower is better)
Translates to: SIYCSKPTTMALLARLIFVHGRK*RGYMQI
Trigger: TATTTGCATATAACCTCTGCATTTCCTCCCGTGTAC...AAAAATCAGTCTAGCTAATAGTGCCATTGTTGTTGGCTTTGAACAGTAGATAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410074.5
CDS-3UTR TCA 90 bp ATGAGAAAGGAAGCCACAAATTTGAAGGGCCTTATAAATACCTTTCACAAAATGAAGGTAAATCTTATATaGCAGCGTGTGACTTCTTCT +
Preference number: 4 (lower is better)
Translates to: MRKEATNLKGLINTFHKMKVNLI*QRVTSS
Trigger: AGAAGAAGTCACACGCTGTCATATAAGATTTACCTT...CATTTTGTGAAAGGTATTTATAAGGCCCTTCAAATTTGTGGCTTCCTTTCTCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR TCA 90 bp TCTCTAGTCATAAATAATCATGTAAAAGACCTCAAAGGAAACCACCATTTGGAGTATCAACTTCCCAAATaGTACAGAGAAGGAAAGCAT +
Preference number: 4 (lower is better)
Translates to: SLVINNHVKDLKGNHHLEYQLPK*YREGKH
Trigger: ATGCTTTCCTTCTCTGTATCATTTGGGAAGTTGATA...CTCCAAATGGTGGTTTCCTTTGAGGTCTTTTACATGATTATTTATGACTAGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR GCA 90 bp TCTCTAGTCATAAATAATCATGTAAAAGACCTCAAAGGAAACCACCATTTGGAGGGTGAGAAATGCAACTaGCAAATGGAAGTAATTGTT +
Preference number: 4 (lower is better)
Translates to: SLVINNHVKDLKGNHHLEGEKCN*QMEVIV
Trigger: AACAATTACTTCCATTTGGCAGTTGCATTTCTCACC...CTCCAAATGGTGGTTTCCTTTGAGGTCTTTTACATGATTATTTATGACTAGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp TCTCTAGTCATAAATAATCATGTAAAAGACCTCAAAGGAAACCACCATTTGGAGTCACCATCCAATCTTTaGCATAGACATTCTTTCCAA +
Preference number: 4 (lower is better)
Translates to: SLVINNHVKDLKGNHHLESPSNL*HRHSFQ
Trigger: TTGGAAAGAATGTCTATGCCAAAGATTGGATGGTGA...CTCCAAATGGTGGTTTCCTTTGAGGTCTTTTACATGATTATTTATGACTAGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CCA 90 bp TCTATCTACTGTTCAAAGCCAACAACAATGGCACTATTAGCTAGACTGATTTTTTTATCATTTAGATCCTaGGGGAACCCTATCTATCTA +
Preference number: 4 (lower is better)
Translates to: SIYCSKPTTMALLARLIFLSFRS*GNPIYL
Trigger: TAGATAGATAGGGTTCCCCCAGGATCTAAATGATAA...AAAAATCAGTCTAGCTAATAGTGCCATTGTTGTTGGCTTTGAACAGTAGATAGA
36% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000410074.5
3UTR CAA 72 bp TCCAGAGCAGACAGATATGTGCCCTTTTATATTCCTTaGATGCTTTCTATAGAATCAGGAAAGTTCAGTTTA +
Preference number: 4 (lower is better)
Translates to: SRADRYVPFYIP*MLSIESGKFSL
Trigger: TAAACTGAACTTTCCTGATTCTATAGAAAGCATCAAAGGAATATAAAAGGGCACATATCTGTCTGCTCTGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR GCA 90 bp TCTCTAGTCATAAATAATCATGTAAAAGACCTCAAAGGAAACCACCATTTGGAGATTCACTTCCTTTGCTaGAATCACTTTATTCAAGAC +
Preference number: 4 (lower is better)
Translates to: SLVINNHVKDLKGNHHLEIHFLC*NHFIQD
Trigger: GTCTTGAATAAAGTGATTGCAGCAAAGGAAGTGAAT...CTCCAAATGGTGGTTTCCTTTGAGGTCTTTTACATGATTATTTATGACTAGAGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS CCA 90 bp TCGCAACCCCGTACTTCTGCCTCTTGGTCGGGATCCAGCGGGCCATaGCGGCGACCTCGCCCCGCGGCGGCGGCGACTAAGGCTGCTACA +
Preference number: 5 (lower is better)
Translates to: SQPRTSASWSGSSGP*RRPRPAAAATKAAT
Trigger: TGTAGCAGCCTTAGTCGCCGCCGCCGCGGGGCGAGGTCGCCGCCATGGCCCGCTGGATCCCGACCAAGAGGCAGAAGTACGGGGTTGCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276440.12
ENST00000410074.5
ENST00000481100.5
CDS-3UTR CAA 90 bp TTCTCTTCGGACAGGCAGTGGGGGAGCGAGCTCAGTGGAGTTCCTCTGGCTGCCGCTGCCCCCTTGATCTaGACGGCTTCCTCCAGAGGC +
Preference number: 5 (lower is better)
Translates to: FSSDRQWGSELSGVPLAAAAPLI*TASSRG
Trigger: GCCTCTGGAGGAAGCCGTCAAGATCAAGGGGGCAGC...GGCAGCCAGAGGAACTCCACTGAGCTCGCTCCCCCACTGCCTGTCCGAAGAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS CCA 90 bp CTTCGGAGTCCACAGGTGTGCTTCTTGCCTTCCTTCAGCTCCATATaGCCCACGCGGACAATCTGGCACACAAGGCTGACGCGGGGCCGG +
Preference number: 5 (lower is better)
Translates to: LRSPQVCFLPSFSSI*PTRTIWHTRLTRGR
Trigger: CCGGCCCCGCGTCAGCCTTGTGTGCCAGATTGTCCGCGTGGGCCATATGGAGCTGAAGGAAGGCAAGAAGCACACCTGTGGACTCCGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276440.12
ENST00000444569.5
ENST00000481100.5
CDS GCA 90 bp TTTCGCCAGATGACAGCCCATTCTCGCAGAGTGGACGTGAGCTCCTaGACCAGGGGGAGCTCGCCAGGAATCACGGTTTCATGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: FRQMTAHSRRVDVSS*TRGSSPGITVSCCP
Trigger: GGGGCAGCATGAAACCGTGATTCCTGGCGAGCTCCCCCTGGTGCAGGAGCTCACGTCCACTCTGCGAGAATGGGCTGTCATCTGGCGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000481100.5
CDS CCA 90 bp TGCTTCTTGCCTTCCTTCAGCTCCATATGGCCCACGCGGACAATCTaGCACACAAGGCTGACGCGGGGCCGGATGAGGTCCATGCTGCTA +
Preference number: 5 (lower is better)
Translates to: CFLPSFSSIWPTRTI*HTRLTRGRMRSMLL
Trigger: TAGCAGCATGGACCTCATCCGGCCCCGCGTCAGCCTTGTGTGCCAGATTGTCCGCGTGGGCCATATGGAGCTGAAGGAAGGCAAGAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276440.12
ENST00000444569.5
ENST00000481100.5
CDS-3UTR CAA 90 bp TGGAGGGCCTCAGTAAAGCTCTGCAAGGATCCTTTCACATGCTCCCAGGCTGGCGTCCCGGCAATGCTCTaGGCCTCCACTAGGCCTCCA +
Preference number: 5 (lower is better)
Translates to: WRASVKLCKDPFTCSQAGVPAML*ASTRPP
Trigger: TGGAGGCCTAGTGGAGGCCAAGAGCATTGCCGGGAC...GCCAGCCTGGGAGCATGTGAAAGGATCCTTGCAGAGCTTTACTGAGGCCCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR CAA 90 bp GCATTGCTGACACAAGGACGGCACCCTCTCTGCATTCCAGAGCAGACAGATATGCCGTACTTCTGCCTCTaGGTCGGGATCCAGCGGGCC +
Preference number: 5 (lower is better)
Translates to: ALLTQGRHPLCIPEQTDMPYFCL*VGIQRA
Trigger: GGCCCGCTGGATCCCGACCAAGAGGCAGAAGTACGG...CATATCTGTCTGCTCTGGAATGCAGAGAGGGTGCCGTCCTTGTGTCAGCAATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR CAA 90 bp GCTTGTCAGACCACTGCAGAAGCTCAGCGTGCAAGAGAAGCGTGTAGGCAGCTTCAGACTTCCGAGCCTTaGGAGGTGGAGGGGGTGGTG +
Preference number: 5 (lower is better)
Translates to: ACQTTAEAQRAREACRQLQTSEP*EVEGVV
Trigger: CACCACCCCCTCCACCTCCAAAGGCTCGGAAGTCTG...AAGCTGCCTACACGCTTCTCTTGCACGCTGAGCTTCTGCAGTGGTCTGACAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CAA 90 bp TTCTCTTCGGACAGGCAGTGGGGGAGCGAGCTCAGTGGAGTTCCTCTGGCTGCCAGAACTTGTCCAGGCTaGTGCAGACCACCATGTCTC +
Preference number: 5 (lower is better)
Translates to: FSSDRQWGSELSGVPLAARTCPG*CRPPCL
Trigger: GAGACATGGTGGTCTGCACAAGCCTGGACAAGTTCT...GGCAGCCAGAGGAACTCCACTGAGCTCGCTCCCCCACTGCCTGTCCGAAGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CAA 90 bp GTGGGTCAGCCCTTCACTCTCTCATCTCCTAAACCCTCGCTACAGACAGTGTGGGCCACCTCATGGGCCTaGAAGAGGGCAATGGTGCTG +
Preference number: 5 (lower is better)
Translates to: VGQPFTLSSPKPSLQTVWATSWA*KRAMVL
Trigger: CAGCACCATTGCCCTCTTCAAGGCCCATGAGGTGGC...CCACACTGTCTGTAGCGAGGGTTTAGGAGATGAGAGAGTGAAGGGCTGACCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR CAA 90 bp TCTGGGCAAGGTTGTGGGAGAGACCACCAGCAAGTTTCCCCCAGTGCTGACCTCTTCAAAGCTGCCCCCTaGATCTTGACGGCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: SGQGCGRDHQQVSPSADLFKAAP*ILTASS
Trigger: GGAGGAAGCCGTCAAGATCAAGGGGGCAGCTTTGAA...GAGGTCAGCACTGGGGGAAACTTGCTGGTGGTCTCTCCCACAACCTTGCCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp CCGTTCCATTATAAGCTGAATGTGCACCGCAGTGGCACCCACATCCTTCCTGTCGGAGGGGGTGGTGCTTaGGCTTCTCTTCGGACAGGC +
Preference number: 5 (lower is better)
Translates to: PFHYKLNVHRSGTHILPVGGGGA*ASLRTG
Trigger: GCCTGTCCGAAGAGAAGCCAAAGCACCACCCCCTCC...GACAGGAAGGATGTGGGTGCCACTGCGGTGCACATTCAGCTTATAATGGAACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CAA 90 bp ATGGAGGGCCTCAGTAAAGCTCTGCAAGGATCCTTTCACATGCTCCCAGGCTGGGCATCACCTGGGAGCTaGTCAGAGGCAGAACTCCCC +
Preference number: 5 (lower is better)
Translates to: MEGLSKALQGSFHMLPGWASPGS*SEAELP
Trigger: GGGGAGTTCTGCCTCTGACAAGCTCCCAGGTGATGC...CCAGCCTGGGAGCATGTGAAAGGATCCTTGCAGAGCTTTACTGAGGCCCTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS GCA 90 bp GATGGTAGCAGGATTTCTGGGCCATGCCGCGCACCTCCAAGAGCTTaGCCTCCTCATCGTGCACAGACATCGTCACCTCCACATTCTTTG +
Preference number: 5 (lower is better)
Translates to: DGSRISGPCRAPPRA*PPHRAQTSSPPHSL
Trigger: CAAAGAATGTGGAGGTGACGATGTCTGTGCACGATGAGGAGGGCAAGCTCTTGGAGGTGCGCGGCATGGCCCAGAAATCCTGCTACCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487948.1
CDS GCA 90 bp CGTGATTGTAAAGACGGATGCGATGGTAGCAGGATTTCTGGGCCATaGCGCGCACCTCCAAGAGCTTGCCCTCCTCATCGTGCACAGACA +
Preference number: 5 (lower is better)
Translates to: RDCKDGCDGSRISGP*RAPPRACPPHRAQT
Trigger: TGTCTGTGCACGATGAGGAGGGCAAGCTCTTGGAGGTGCGCGGCATGGCCCAGAAATCCTGCTACCATCGCATCCGTCTTTACAATCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487948.1
CDS-3UTR CAA 90 bp GGTTTTGGGCTGGTAAACATCATCCCAGATCAGGAAATGCAGTCAGCAGGGAGCGCTGCCCCCTTGATCTaGACGGCTTCCTCCAGAGGC +
Preference number: 5 (lower is better)
Translates to: GFGLVNIIPDQEMQSAGSAAPLI*TASSRG
Trigger: GCCTCTGGAGGAAGCCGTCAAGATCAAGGGGGCAGC...GCTCCCTGCTGACTGCATTTCCTGATCTGGGATGATGTTTACCAGCCCAAAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CAA 90 bp GGTTTTGGGCTGGTAAACATCATCCCAGATCAGGAAATGCAGTCAGCAGGGAGCAGGGTCCTGGTGGCTTaGGGAGTGAGTGGAGGTGGG +
Preference number: 5 (lower is better)
Translates to: GFGLVNIIPDQEMQSAGSRVLVA*GVSGGG
Trigger: CCCACCTCCACTCACTCCCAAAGCCACCAGGACCCT...GCTCCCTGCTGACTGCATTTCCTGATCTGGGATGATGTTTACCAGCCCAAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CAA 90 bp GGTTTTGGGCTGGTAAACATCATCCCAGATCAGGAAATGCAGTCAGCAGGGAGCGGAGGGGGTGGTGCTTaGGCTTCTCTTCGGACAGGC +
Preference number: 5 (lower is better)
Translates to: GFGLVNIIPDQEMQSAGSGGGGA*ASLRTG
Trigger: GCCTGTCCGAAGAGAAGCCAAAGCACCACCCCCTCC...GCTCCCTGCTGACTGCATTTCCTGATCTGGGATGATGTTTACCAGCCCAAAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CAA 90 bp AATATGGAGGGCCTCAGTAAAGCTCTGCAAGGATCCTTTCACATGCTCCCAGGCTCTGCCAGTTCATCCTaGGGGAGCGTCCCAGACAGG +
Preference number: 5 (lower is better)
Translates to: NMEGLSKALQGSFHMLPGSASSS*GSVPDR
Trigger: CCTGTCTGGGACGCTCCCCAAGGATGAACTGGCAGA...GCCTGGGAGCATGTGAAAGGATCCTTGCAGAGCTTTACTGAGGCCCTCCATATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR CAA 90 bp TCTGGGCAAGGTTGTGGGAGAGACCACCAGCAAGTTTCCCCCAGTGCTGACCTCGCTGTGACTTTCTTCTaGAGCTCTGCCAGTTCATCC +
Preference number: 5 (lower is better)
Translates to: SGQGCGRDHQQVSPSADLAVTFF*SSASSS
Trigger: GGATGAACTGGCAGAGCTCAAGAAGAAAGTCACAGC...GAGGTCAGCACTGGGGGAAACTTGCTGGTGGTCTCTCCCACAACCTTGCCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp GGTTTTGGGCTGGTAAACATCATCCCAGATCAGGAAATGCAGTCAGCAGGGAGCGCCACCTCATGGGCCTaGAAGAGGGCAATGGTGCTG +
Preference number: 5 (lower is better)
Translates to: GFGLVNIIPDQEMQSAGSATSWA*KRAMVL
Trigger: CAGCACCATTGCCCTCTTCAAGGCCCATGAGGTGGC...GCTCCCTGCTGACTGCATTTCCTGATCTGGGATGATGTTTACCAGCCCAAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp TCTGGGCAAGGTTGTGGGAGAGACCACCAGCAAGTTTCCCCCAGTGCTGACCTCTTCCTCTCCGTCAAGTaGGGTGGCAGTGTTATAACC +
Preference number: 5 (lower is better)
Translates to: SGQGCGRDHQQVSPSADLFLSVK*GGSVIT
Trigger: GGTTATAACACTGCCACCCAACTTGACGGAGAGGAA...GAGGTCAGCACTGGGGGAAACTTGCTGGTGGTCTCTCCCACAACCTTGCCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp AGAGAGGGACCGGTCCCAGGCATGCTGCTGAACACAGTTGCTGATCCTCTCGTTAAAGTGGCTCCAAGATaGAGCCATCAGATCCCGGTC +
Preference number: 5 (lower is better)
Translates to: REGPVPGMLLNTVADPLVKVAPR*SHQIPV
Trigger: GACCGGGATCTGATGGCTCAATCTTGGAGCCACTTT...AACGAGAGGATCAGCAACTGTGTTCAGCAGCATGCCTGGGACCGGTCCCTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CAA 90 bp TGGAGGGCCTCAGTAAAGCTCTGCAAGGATCCTTTCACATGCTCCCAGGCTGGCGCTGTGACTTTCTTCTaGAGCTCTGCCAGTTCATCC +
Preference number: 5 (lower is better)
Translates to: WRASVKLCKDPFTCSQAGAVTFF*SSASSS
Trigger: GGATGAACTGGCAGAGCTCAAGAAGAAAGTCACAGC...GCCAGCCTGGGAGCATGTGAAAGGATCCTTGCAGAGCTTTACTGAGGCCCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR CAA 90 bp GTGGGTCAGCCCTTCACTCTCTCATCTCCTAAACCCTCGCTACAGACAGTGTGGTTTTCCTCAATCCTTTaGGAGGCCACCTCATGGGCC +
Preference number: 5 (lower is better)
Translates to: VGQPFTLSSPKPSLQTVWFSSIL*EATSWA
Trigger: GGCCCATGAGGTGGCCTCCAAAAGGATTGAGGAAAA...CCACACTGTCTGTAGCGAGGGTTTAGGAGATGAGAGAGTGAAGGGCTGACCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR CAA 90 bp GGGTGGGTCAGCCCTTCACTCTCTCATCTCCTAAACCCTCGCTACAGACAGTGTAGCTTCTCTATTTCCTaGGGCATCCCGTTACTGCCC +
Preference number: 5 (lower is better)
Translates to: GWVSPSLSHLLNPRYRQCSFSIS*GIPLLP
Trigger: GGGCAGTAACGGGATGCCCAAGGAAATAGAGAAGCT...ACACTGTCTGTAGCGAGGGTTTAGGAGATGAGAGAGTGAAGGGCTGACCCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR CAA 90 bp TCTGGGCAAGGTTGTGGGAGAGACCACCAGCAAGTTTCCCCCAGTGCTGACCTCAACTCTTTGCTCAGCTaGATGGCCTTCTCCCACATT +
Preference number: 5 (lower is better)
Translates to: SGQGCGRDHQQVSPSADLNSLLS*MAFSHI
Trigger: AATGTGGGAGAAGGCCATCAAGCTGAGCAAAGAGTT...GAGGTCAGCACTGGGGGAAACTTGCTGGTGGTCTCTCCCACAACCTTGCCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp AGCAGCTGTCTAAGGCACTCGGTGTTGCAGGGAGGGCAAGATCCTTACTGGGATCACTGCATGTACTGCTaGGGGGACGACTTGATGTCT +
Preference number: 5 (lower is better)
Translates to: SSCLRHSVLQGGQDPYWDHCMYC*GDDLMS
Trigger: AGACATCAAGTCGTCCCCCAAGCAGTACATGCAGTG...ATCCCAGTAAGGATCTTGCCCTCCCTGCAACACCGAGTGCCTTAGACAGCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CAA 90 bp CCACACCCCTTCCAGAATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACACAGACTTCCGAGCCTTaGGAGGTGGAGGGGGTGGTG +
Preference number: 5 (lower is better)
Translates to: PHPFQNLHTHFLSNALDTQTSEP*EVEGVV
Trigger: CACCACCCCCTCCACCTCCAAAGGCTCGGAAGTCTG...TGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATTCTGGAAGGGGTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp TGGAGGGCCTCAGTAAAGCTCTGCAAGGATCCTTTCACATGCTCCCAGGCTGGCCGAGGTTCTGCAGGATaGACTTCTCTTCTTGGATCT +
Preference number: 5 (lower is better)
Translates to: WRASVKLCKDPFTCSQAGRGSAG*TSLLGS
Trigger: AGATCCAAGAAGAGAAGTCAATCCTGCAGAACCTCG...GCCAGCCTGGGAGCATGTGAAAGGATCCTTGCAGAGCTTTACTGAGGCCCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR CAA 90 bp ATTTGCTGCAGCAGGGCAATCATGCAAGCCACAAAACTCCCGATGTGGGGAGACTCAGGCTTGTTGGAGTaGTCATCTAACTGGCCGCTG +
Preference number: 5 (lower is better)
Translates to: ICCSRAIMQATKLPMWGDSGLLE*SSNWPL
Trigger: CAGCGGCCAGTTAGATGACAACTCCAACAAGCCTGA...GTCTCCCCACATCGGGAGTTTTGTGGCTTGCATGATTGCCCTGCTGCAGCAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CAA 90 bp CAGACTGGTAAGTCCCTTGTAGCCAGTGATTTGCGCTCAGAGGAGGTAATAGGATCAGAAGCTGCGAGCTaGCCTCGTGGTCAGGCTTGT +
Preference number: 5 (lower is better)
Translates to: QTGKSLVASDLRSEEVIGSEAAS*PRGQAC
Trigger: ACAAGCCTGACCACGAGGCAAGCTCGCAGCTTCTGA...TCCTATTACCTCCTCTGAGCGCAAATCACTGGCTACAAGGGACTTACCAGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CAA 90 bp CCGTTCCATTATAAGCTGAATGTGCACCGCAGTGGCACCCACATCCTTCCTGTCTTGCTGATCCTCTCGTaGGTCAGCTCCATGGTTTCG +
Preference number: 5 (lower is better)
Translates to: PFHYKLNVHRSGTHILPVLLILS*VSSMVS
Trigger: CGAAACCATGGAGCTGACCAACGAGAGGATCAGCAA...GACAGGAAGGATGTGGGTGCCACTGCGGTGCACATTCAGCTTATAATGGAACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CAA 90 bp AGCAGCTGTCTAAGGCACTCGGTGTTGCAGGGAGGGCAAGATCCTTACTGGGATTTCCTCTCCGTCAAGTaGGGTGGCAGTGTTATAACC +
Preference number: 5 (lower is better)
Translates to: SSCLRHSVLQGGQDPYWDFLSVK*GGSVIT
Trigger: GGTTATAACACTGCCACCCAACTTGACGGAGAGGAA...ATCCCAGTAAGGATCTTGCCCTCCCTGCAACACCGAGTGCCTTAGACAGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CAA 90 bp CTTGATGTCTTCCCCAGGAGGCGTGGTACTGGTCATCTTCTCCGCATTGGGGAAGCAATGACCTGGGACTaGCTCAGACTCCAGTCTTTT +
Preference number: 5 (lower is better)
Translates to: LDVFPRRRGTGHLLRIGEAMTWD*LRLQSF
Trigger: AAAAGACTGGAGTCTGAGCAAGTCCCAGGTCATTGC...TTCCCCAATGCGGAGAAGATGACCAGTACCACGCCTCCTGGGGAAGACATCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CAA 90 bp TCTGGGCAAGGTTGTGGGAGAGACCACCAGCAAGTTTCCCCCAGTGCTGACCTCAGTAGATTACAGGGGTaGCTCCACCATCAATATGGA +
Preference number: 5 (lower is better)
Translates to: SGQGCGRDHQQVSPSADLSRLQG*LHHQYG
Trigger: TCCATATTGATGGTGGAGCAACCCCTGTAATCTACT...GAGGTCAGCACTGGGGGAAACTTGCTGGTGGTCTCTCCCACAACCTTGCCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp CCTGTGCAGGTGCTGGAGCAGGTCATGACGTTCACACCTGCACTTCTTCAGAGTCTCAGTTTGTTCTACTaGTCTGCAGTGGCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: PVQVLEQVMTFTPALLQSLSLFY*SAVAAA
Trigger: TGCAGCTGCCACTGCAGACAAGTAGAACAAACTGAG...ACTCTGAAGAAGTGCAGGTGTGAACGTCATGACCTGCTCCAGCACCTGCACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS TCA 90 bp CTTGGATCTTTTCCTCAATCCTTTTGGAGGCCACCTCATGGGCCTTaGAGAGGGCAATGGTGCTGGTTTCGTCAGGGTCTAGGATGTTCC +
Preference number: 5 (lower is better)
Translates to: LGSFPQSFWRPPHGP*RGQWCWFRQGLGCS
Trigger: GGAACATCCTAGACCCTGACGAAACCAGCACCATTGCCCTCTTCAAGGCCCATGAGGTGGCCTCCAAAAGGATTGAGGAAAAGATCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000481100.5
CDS-3UTR CAA 90 bp AGTTCCCGGAAGCAAGAAGACAACCGCTCATGCAGCGGCTTCAGCTGCTCTGTGGGGATGAATTTGATTTaGTGGGGACCCAGGTTATAC +
Preference number: 5 (lower is better)
Translates to: SSRKQEDNRSCSGFSCSVGMNLI*WGPRLY
Trigger: GTATAACCTGGGTCCCCACAAAATCAAATTCATCCC...CACAGAGCAGCTGAAGCCGCTGCATGAGCGGTTGTCTTCTTGCTTCCGGGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CAA 90 bp GCTTGTCAGACCACTGCAGAAGCTCAGCGTGCAAGAGAAGCGTGTAGGCAGCTTAACTCTTTGCTCAGCTaGATGGCCTTCTCCCACATT +
Preference number: 5 (lower is better)
Translates to: ACQTTAEAQRAREACRQLNSLLS*MAFSHI
Trigger: AATGTGGGAGAAGGCCATCAAGCTGAGCAAAGAGTT...AAGCTGCCTACACGCTTCTCTTGCACGCTGAGCTTCTGCAGTGGTCTGACAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CAA 90 bp AATTCCATGTGGACTGGAAGGGAGGTGGCATGGCCTCAAAATTCTATCAAAGAGTGCTTGGGGGACGACTaGATGTCTTCCCCAGGAGGC +
Preference number: 5 (lower is better)
Translates to: NSMWTGREVAWPQNSIKECLGDD*MSSPGG
Trigger: GCCTCCTGGGGAAGACATCAAGTCGTCCCCCAAGCA...CTCTTTGATAGAATTTTGAGGCCATGCCACCTCCCTTCCAGTCCACATGGAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CAA 90 bp AGCAGCTGTCTAAGGCACTCGGTGTTGCAGGGAGGGCAAGATCCTTACTGGGATCATTGTCAGACGAGTTaGAAGAGGTGGAAACCACAG +
Preference number: 5 (lower is better)
Translates to: SSCLRHSVLQGGQDPYWDHCQTS*KRWKPQ
Trigger: CTGTGGTTTCCACCTCTTCAAACTCGTCTGACAATG...ATCCCAGTAAGGATCTTGCCCTCCCTGCAACACCGAGTGCCTTAGACAGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CAA 90 bp AGAGAGGGACCGGTCCCAGGCATGCTGCTGAACACAGTTGCTGATCCTCTCGTTAGTAGATTACAGGGGTaGCTCCACCATCAATATGGA +
Preference number: 5 (lower is better)
Translates to: REGPVPGMLLNTVADPLVSRLQG*LHHQYG
Trigger: TCCATATTGATGGTGGAGCAACCCCTGTAATCTACT...AACGAGAGGATCAGCAACTGTGTTCAGCAGCATGCCTGGGACCGGTCCCTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CAA 90 bp CTTGATGTCTTCCCCAGGAGGCGTGGTACTGGTCATCTTCTCCGCATTGGGGAACTTGTAGCCAGTGATTaGCGCTCAGAGGAGGTAATA +
Preference number: 5 (lower is better)
Translates to: LDVFPRRRGTGHLLRIGELVASD*RSEEVI
Trigger: TATTACCTCCTCTGAGCGCAAATCACTGGCTACAAG...TTCCCCAATGCGGAGAAGATGACCAGTACCACGCCTCCTGGGGAAGACATCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CAA 90 bp ATATGGAGGGCCTCAGTAAAGCTCTGCAAGGATCCTTTCACATGCTCCCAGGCTTCTAGGATGTTCCCATaGTCATCTCGCACCACCAGA +
Preference number: 5 (lower is better)
Translates to: IWRASVKLCKDPFTCSQASRMFP*SSRTTR
Trigger: TCTGGTGGTGCGAGATGACAATGGGAACATCCTAGA...AGCCTGGGAGCATGTGAAAGGATCCTTGCAGAGCTTTACTGAGGCCCTCCATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR CAA 90 bp AGAAGGTATCCAGACAGTGATGTATCCTATCTTCCCAGCCTCTGCTCAAAGACCGCTTTCTCCAAGAGCTaGCCCTCCTCATCGTGCACA +
Preference number: 5 (lower is better)
Translates to: RRYPDSDVSYLPSLCSKTAFSKS*PSSSCT
Trigger: TGTGCACGATGAGGAGGGCAAGCTCTTGGAGAAAGC...GGTCTTTGAGCAGAGGCTGGGAAGATAGGATACATCACTGTCTGGATACCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp CTTTGTGCTTTTCTGGTTGGGCTCATCAAATCGGGTTCTGGTGCTTTCTCTGCATTCAAAGCTGCCCCCTaGATCTTGACGGCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: LCAFLVGLIKSGSGAFSAFKAAP*ILTASS
Trigger: GGAGGAAGCCGTCAAGATCAAGGGGGCAGCTTTGAA...TGCAGAGAAAGCACCAGAACCCGATTTGATGAGCCCAACCAGAAAAGCACAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CAA 90 bp GGTTTTGGGCTGGTAAACATCATCCCAGATCAGGAAATGCAGTCAGCAGGGAGCTCGTGGTCAGGCTTGTaGGAGTTGTCATCTAACTGG +
Preference number: 5 (lower is better)
Translates to: GFGLVNIIPDQEMQSAGSSWSGL*ELSSNW
Trigger: CCAGTTAGATGACAACTCCAACAAGCCTGACCACGA...GCTCCCTGCTGACTGCATTTCCTGATCTGGGATGATGTTTACCAGCCCAAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CAA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTTCAGAAGCTGCGAGCTaGCCTCGTGGTCAGGCTTGT +
Preference number: 5 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPSEAAS*PRGQAC
Trigger: ACAAGCCTGACCACGAGGCAAGCTCGCAGCTTCTGA...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CAA 90 bp CCACACCCCTTCCAGAATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACACCAATCACTGTCCGGTaGATCCTTCTCAGCAGCCGT +
Preference number: 5 (lower is better)
Translates to: PHPFQNLHTHFLSNALDTPITVR*ILLSSR
Trigger: ACGGCTGCTGAGAAGGATCAACCGGACAGTGATTGG...TGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATTCTGGAAGGGGTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp CTTTGTGCTTTTCTGGTTGGGCTCATCAAATCGGGTTCTGGTGCTTTCTCTGCACCAATCACTGTCCGGTaGATCCTTCTCAGCAGCCGT +
Preference number: 5 (lower is better)
Translates to: LCAFLVGLIKSGSGAFSAPITVR*ILLSSR
Trigger: ACGGCTGCTGAGAAGGATCAACCGGACAGTGATTGG...TGCAGAGAAAGCACCAGAACCCGATTTGATGAGCCCAACCAGAAAAGCACAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CAA 90 bp AGAGAGGGACCGGTCCCAGGCATGCTGCTGAACACAGTTGCTGATCCTCTCGTTACAATTTTGTTGCGCTaGGCTTGTGAGAAGGTTTCA +
Preference number: 5 (lower is better)
Translates to: REGPVPGMLLNTVADPLVTILLR*ACEKVS
Trigger: TGAAACCTTCTCACAAGCCAAGCGCAACAAAATTGT...AACGAGAGGATCAGCAACTGTGTTCAGCAGCATGCCTGGGACCGGTCCCTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CAA 90 bp ATTTGCTGCAGCAGGGCAATCATGCAAGCCACAAAACTCCCGATGTGGGGAGACATGGATGGGATGAATTaGATTTTGTGGGGACCCAGG +
Preference number: 5 (lower is better)
Translates to: ICCSRAIMQATKLPMWGDMDGMN*ILWGPR
Trigger: CCTGGGTCCCCACAAAATCAAATTCATCCCATCCAT...GTCTCCCCACATCGGGAGTTTTGTGGCTTGCATGATTGCCCTGCTGCAGCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CAA 90 bp AGAGAGGGACCGGTCCCAGGCATGCTGCTGAACACAGTTGCTGATCCTCTCGTTGCCTTCTCCCACATTTaGCCTTTGTCGAAATATGAT +
Preference number: 5 (lower is better)
Translates to: REGPVPGMLLNTVADPLVAFSHI*PLSKYD
Trigger: ATCATATTTCGACAAAGGCAAAATGTGGGAGAAGGC...AACGAGAGGATCAGCAACTGTGTTCAGCAGCATGCCTGGGACCGGTCCCTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CAA 90 bp GGTTTTGGGCTGGTAAACATCATCCCAGATCAGGAAATGCAGTCAGCAGGGAGCGGTCTGGAAGGAGCATaGTCAGACGAGTTTGAAGAG +
Preference number: 5 (lower is better)
Translates to: GFGLVNIIPDQEMQSAGSGLEGA*SDEFEE
Trigger: CTCTTCAAACTCGTCTGACAATGCTCCTTCCAGACC...GCTCCCTGCTGACTGCATTTCCTGATCTGGGATGATGTTTACCAGCCCAAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CAA 90 bp AGCAGCTGTCTAAGGCACTCGGTGTTGCAGGGAGGGCAAGATCCTTACTGGGATTCTTTTCTCTTAAACTaGCTGATCCGGTTCTCGCTG +
Preference number: 5 (lower is better)
Translates to: SSCLRHSVLQGGQDPYWDSFLLN*LIRFSL
Trigger: CAGCGAGAACCGGATCAGCAAGTTTAAGAGAAAAGA...ATCCCAGTAAGGATCTTGCCCTCCCTGCAACACCGAGTGCCTTAGACAGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CAA 90 bp TTCAGGCAGGAGAGAGCTATTATTTCCATTAAGGTGGAAAGGGAATCATACGGAAGGGTCCTGGTGGCTTaGGGAGTGAGTGGAGGTGGG +
Preference number: 5 (lower is better)
Translates to: FRQERAIISIKVERESYGRVLVA*GVSGGG
Trigger: CCCACCTCCACTCACTCCCAAAGCCACCAGGACCCT...TCCGTATGATTCCCTTTCCACCTTAATGGAAATAATAGCTCTCTCCTGCCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp CCATCTCTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAACTAAGGCACTCGGTGTaGCAGGGAGGGCAAGATCCT +
Preference number: 5 (lower is better)
Translates to: PSLPRCNMGWDQCVHVRKLRHSV*QGGQDP
Trigger: AGGATCTTGCCCTCCCTGCAACACCGAGTGCCTTAG...TTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAGAGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CAA 90 bp TGGAGGGCCTCAGTAAAGCTCTGCAAGGATCCTTTCACATGCTCCCAGGCTGGCTGTGGAATTCTCAGTTaGTTCTACTTGTCTGCAGTG +
Preference number: 5 (lower is better)
Translates to: WRASVKLCKDPFTCSQAGCGILS*FYLSAV
Trigger: CACTGCAGACAAGTAGAACAAACTGAGAATTCCACA...GCCAGCCTGGGAGCATGTGAAAGGATCCTTGCAGAGCTTTACTGAGGCCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR CAA 90 bp AATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACATCTGAGAGCTTTTGCTCTGCCAGTTCATCCTaGGGGAGCGTCCCAGACAGG +
Preference number: 5 (lower is better)
Translates to: NLHTHFLSNALDTSESFCSASSS*GSVPDR
Trigger: CCTGTCTGGGACGCTCCCCAAGGATGAACTGGCAGA...GCAAAAGCTCTCAGATGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp AATATGGAGGGCCTCAGTAAAGCTCTGCAAGGATCCTTTCACATGCTCCCAGGCGCATCTTCCCCGATGTaGCAGACAAAGTTCTTGAAG +
Preference number: 5 (lower is better)
Translates to: NMEGLSKALQGSFHMLPGASSPM*QTKFLK
Trigger: CTTCAAGAACTTTGTCTGCAACATCGGGGAAGATGC...GCCTGGGAGCATGTGAAAGGATCCTTGCAGAGCTTTACTGAGGCCCTCCATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR CAA 90 bp CACTTCTTCAGAGTGACACGGCTTGAATCTGCTCCCAACAGCTCCTCAATGGCCGTCTGTAAACACTGCTaGGAGGTTATTGAGCTTCTC +
Preference number: 5 (lower is better)
Translates to: HFFRVTRLESAPNSSSMAVCKHC*EVIELL
Trigger: GAGAAGCTCAATAACCTCCAAGCAGTGTTTACAGAC...GGCCATTGAGGAGCTGTTGGGAGCAGATTCAAGCCGTGTCACTCTGAAGAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR CAA 90 bp CTGCTGACCAGGAGGGCGAAGACCTCCCCAGAGCTGGAGAGGTATTTGTGTTTCCAGGTTTTTGGATGCTaGAAGCTCTTTTTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: LLTRRAKTSPELERYLCFQVFGC*KLFFFH
Trigger: ATGGAAGAAAAAGAGCTTCAAGCATCCAAAAACCTG...GAAACACAAATACCTCTCCAGCTCTGGGGAGGTCTTCGCCCTCCTGGTCAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CAA 90 bp AGAGAGGGACCGGTCCCAGGCATGCTGCTGAACACAGTTGCTGATCCTCTCGTTTTAATGTTCTGGGAGTaGGAACGCCAATTTAACAAG +
Preference number: 5 (lower is better)
Translates to: REGPVPGMLLNTVADPLVLMFWE*ERQFNK
Trigger: CTTGTTAAATTGGCGTTCCAACTCCCAGAACATTAA...AACGAGAGGATCAGCAACTGTGTTCAGCAGCATGCCTGGGACCGGTCCCTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CAA 90 bp GCTTGTCAGACCACTGCAGAAGCTCAGCGTGCAAGAGAAGCGTGTAGGCAGCTTGTAGAGCACTCGGGATaGGATGATGAATCTAAACAA +
Preference number: 5 (lower is better)
Translates to: ACQTTAEAQRAREACRQLVEHSG*DDESKQ
Trigger: TTGTTTAGATTCATCATCCAATCCCGAGTGCTCTAC...AAGCTGCCTACACGCTTCTCTTGCACGCTGAGCTTCTGCAGTGGTCTGACAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CAA 90 bp CTGAGTTTCCCAAATGAAAAGACCTACAGTTACAGACACTGGGGATTTCTTTCTGCTGCCCCCTTGATCTaGACGGCTTCCTCCAGAGGC +
Preference number: 5 (lower is better)
Translates to: LSFPNEKTYSYRHWGFLSAAPLI*TASSRG
Trigger: GCCTCTGGAGGAAGCCGTCAAGATCAAGGGGGCAGC...AGAAAGAAATCCCCAGTGTCTGTAACTGTAGGTCTTTTCATTTGGGAAACTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CAA 90 bp CCACACCCCTTCCAGAATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACATCAGGCTTGTTGGAGTaGTCATCTAACTGGCCGCTG +
Preference number: 5 (lower is better)
Translates to: PHPFQNLHTHFLSNALDTSGLLE*SSNWPL
Trigger: CAGCGGCCAGTTAGATGACAACTCCAACAAGCCTGA...TGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATTCTGGAAGGGGTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp CCACACCCCTTCCAGAATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACAGCCTCGTGGTCAGGCTaGTTGGAGTTGTCATCTAAC +
Preference number: 5 (lower is better)
Translates to: PHPFQNLHTHFLSNALDTASWSG*LELSSN
Trigger: GTTAGATGACAACTCCAACAAGCCTGACCACGAGGC...TGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATTCTGGAAGGGGTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp AATTCCATGTGGACTGGAAGGGAGGTGGCATGGCCTCAAAATTCTATCAAAGAGGTGGCTGTCGTCCATTaGCTGCAGCAGGGCAATCAT +
Preference number: 5 (lower is better)
Translates to: NSMWTGREVAWPQNSIKEVAVVH*LQQGNH
Trigger: ATGATTGCCCTGCTGCAGCAAATGGACGACAGCCAC...CTCTTTGATAGAATTTTGAGGCCATGCCACCTCCCTTCCAGTCCACATGGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CAA 90 bp CTCGGTGTTGCAGGGAGGGCAAGATCCTTACTGGGATCCAGGCTCGGAAGTAGGTTTCCAATCAGGTCCTaGAACATGATAAAAGTTTCC +
Preference number: 5 (lower is better)
Translates to: LGVAGRARSLLGSRLGSRFPIRS*NMIKVS
Trigger: GGAAACTTTTATCATGTTCAAGGACCTGATTGGAAA...CCTACTTCCGAGCCTGGATCCCAGTAAGGATCTTGCCCTCCCTGCAACACCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CAA 90 bp GGTTTTGGGCTGGTAAACATCATCCCAGATCAGGAAATGCAGTCAGCAGGGAGCGAGCTGGAGAGGTATTaGTGTTTCCGGCAATGTTCT +
Preference number: 5 (lower is better)
Translates to: GFGLVNIIPDQEMQSAGSELERY*CFRQCS
Trigger: AGAACATTGCCGGAAACACAAATACCTCTCCAGCTC...GCTCCCTGCTGACTGCATTTCCTGATCTGGGATGATGTTTACCAGCCCAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CAA 90 bp CAACTGCCAAATGGAAGTAATTGTTCCAGAGCTGAAGTTCAAAGCTTGCCTGATTGCTTGGGGGACGACTaGATGTCTTCCCCAGGAGGC +
Preference number: 5 (lower is better)
Translates to: QLPNGSNCSRAEVQSLPDCLGDD*MSSPGG
Trigger: GCCTCCTGGGGAAGACATCAAGTCGTCCCCCAAGCA...ATCAGGCAAGCTTTGAACTTCAGCTCTGGAACAATTACTTCCATTTGGCAGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CAA 90 bp CCACACCCCTTCCAGAATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACATTGCTGATCCTCTCGTaGGTCAGCTCCATGGTTTCG +
Preference number: 5 (lower is better)
Translates to: PHPFQNLHTHFLSNALDTLLILS*VSSMVS
Trigger: CGAAACCATGGAGCTGACCAACGAGAGGATCAGCAA...TGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATTCTGGAAGGGGTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp ATGGGCATGTGGGAACTTTCTGGGGTGCTGAAAACAGTGTATGTCTCTATCTTAAGACCCCGTGCGGCTTaGCTTCCTCTCCGTCAAGTT +
Preference number: 5 (lower is better)
Translates to: MGMWELSGVLKTVYVSILRPRAA*LPLRQV
Trigger: AACTTGACGGAGAGGAAGCAAAGCCGCACGGGGTCT...TAAGATAGAGACATACACTGTTTTCAGCACCCCAGAAAGTTCCCACATGCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp ATTTGCTGCAGCAGGGCAATCATGCAAGCCACAAAACTCCCGATGTGGGGAGACTTTGTGCTTTTCTGGTaGGGCTCATCAAATCGGGTT +
Preference number: 5 (lower is better)
Translates to: ICCSRAIMQATKLPMWGDFVLFW*GSSNRV
Trigger: AACCCGATTTGATGAGCCCAACCAGAAAAGCACAAA...GTCTCCCCACATCGGGAGTTTTGTGGCTTGCATGATTGCCCTGCTGCAGCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CAA 90 bp GGTTTTGGGCTGGTAAACATCATCCCAGATCAGGAAATGCAGTCAGCAGGGAGCCTTGTAGCCAGTGATTaGCGCTCAGAGGAGGTAATA +
Preference number: 5 (lower is better)
Translates to: GFGLVNIIPDQEMQSAGSLVASD*RSEEVI
Trigger: TATTACCTCCTCTGAGCGCAAATCACTGGCTACAAG...GCTCCCTGCTGACTGCATTTCCTGATCTGGGATGATGTTTACCAGCCCAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CAA 90 bp GCTTGTCAGACCACTGCAGAAGCTCAGCGTGCAAGAGAAGCGTGTAGGCAGCTTAAGAGCTGCGGTTTATaGGAGAAGTTAAATCACAGG +
Preference number: 5 (lower is better)
Translates to: ACQTTAEAQRAREACRQLKSCGL*EKLNHR
Trigger: CCTGTGATTTAACTTCTCCAATAAACCGCAGCTCTT...AAGCTGCCTACACGCTTCTCTTGCACGCTGAGCTTCTGCAGTGGTCTGACAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS TCA 90 bp CTGTTGATCTATCAACCAAGTGTGAAAAATTCTTCTGAACCTGGGTaGGGTCACCGGGCAAGAGCTTCAAGGATACCCAAAGGCCTTGCC +
Preference number: 5 (lower is better)
Translates to: LLIYQPSVKNSSEPG*GHRARASRIPKGLA
Trigger: GGCAAGGCCTTTGGGTATCCTTGAAGCTCTTGCCCGGTGACCTCACCCAGGTTCAGAAGAATTTTTCACACTTGGTTGATAGATCAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276440.12
ENST00000444569.5
ENST00000478099.1
CDS-3UTR CAA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTGCCTCGTGGTCAGGCTaGTTGGAGTTGTCATCTAAC +
Preference number: 5 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPASWSG*LELSSN
Trigger: GTTAGATGACAACTCCAACAAGCCTGACCACGAGGC...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CAA 90 bp AATTCCATGTGGACTGGAAGGGAGGTGGCATGGCCTCAAAATTCTATCAAAGAGGTCTCAGCCAACTCTTaGCTCAGCTTGATGGCCTTC +
Preference number: 5 (lower is better)
Translates to: NSMWTGREVAWPQNSIKEVSANS*LSLMAF
Trigger: GAAGGCCATCAAGCTGAGCAAAGAGTTGGCTGAGAC...CTCTTTGATAGAATTTTGAGGCCATGCCACCTCCCTTCCAGTCCACATGGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CAA 90 bp AATTCCATGTGGACTGGAAGGGAGGTGGCATGGCCTCAAAATTCTATCAAAGAGCACTGCATGTACTGCTaGGGGGACGACTTGATGTCT +
Preference number: 5 (lower is better)
Translates to: NSMWTGREVAWPQNSIKEHCMYC*GDDLMS
Trigger: AGACATCAAGTCGTCCCCCAAGCAGTACATGCAGTG...CTCTTTGATAGAATTTTGAGGCCATGCCACCTCCCTTCCAGTCCACATGGAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CAA 90 bp CCCGGTCTGGAAGGAGCATTGTCAGACGAGTTTGAAGAGGTGGAAACCACAGAGTTTTCTACTTTCTCCTaGAGTTCCCGGAAGCAAGAA +
Preference number: 5 (lower is better)
Translates to: PGLEGALSDEFEEVETTEFSTFS*SSRKQE
Trigger: TTCTTGCTTCCGGGAACTCAAGGAGAAAGTAGAAAA...CTCTGTGGTTTCCACCTCTTCAAACTCGTCTGACAATGCTCCTTCCAGACCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CAA 90 bp AATTCCATGTGGACTGGAAGGGAGGTGGCATGGCCTCAAAATTCTATCAAAGAGAAAGTGGCTCCAAGATaGAGCCATCAGATCCCGGTC +
Preference number: 5 (lower is better)
Translates to: NSMWTGREVAWPQNSIKEKVAPR*SHQIPV
Trigger: GACCGGGATCTGATGGCTCAATCTTGGAGCCACTTT...CTCTTTGATAGAATTTTGAGGCCATGCCACCTCCCTTCCAGTCCACATGGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS TCA 90 bp CGGGCTATTGCTGTTGATCTATCAACCAAGTGTGAAAAATTCTTCTaGACCTGGGTGAGGTCACCGGGCAAGAGCTTCAAGGATACCCAA +
Preference number: 5 (lower is better)
Translates to: RAIAVDLSTKCEKFF*TWVRSPGKSFKDTQ
Trigger: TTGGGTATCCTTGAAGCTCTTGCCCGGTGACCTCACCCAGGTTCAGAAGAATTTTTCACACTTGGTTGATAGATCAACAGCAATAGCCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276440.12
ENST00000444569.5
ENST00000478099.1
CDS TCA 90 bp GCAGGGATGAGTGCCTTCTTAATAACTCAGATTGCTCAGGTTCACTaGGAGCTCACTGTGGCCACTGACTCAACAAATAGTTTTGGGGGA +
Preference number: 5 (lower is better)
Translates to: AGMSAFLITQIAQVH*ELTVATDSTNSFGG
Trigger: TCCCCCAAAACTATTTGTTGAGTCAGTGGCCACAGTGAGCTCTCAGTGAACCTGAGCAATCTGAGTTATTAAGAAGGCACTCATCCCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481728.2
CDS GCA 90 bp AGAATTAAAATACGGCCAAGATTCTATCGTGATTGTAAAGACGGATaGGATGGTAGCAGGATTTCTGGGCCATGCCGCGCACCTCCAAGA +
Preference number: 5 (lower is better)
Translates to: RIKIRPRFYRDCKDG*DGSRISGPCRAPPR
Trigger: TCTTGGAGGTGCGCGGCATGGCCCAGAAATCCTGCTACCATCGCATCCGTCTTTACAATCACGATAGAATCTTGGCCGTATTTTAATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487948.1
CDS-3UTR CAA 90 bp ATGAGAAAGGAAGCCACAAATTTGAAGGGCCTTATAAATACCTTTCACAAAATGCCGTACTTCTGCCTCTaGGTCGGGATCCAGCGGGCC +
Preference number: 5 (lower is better)
Translates to: MRKEATNLKGLINTFHKMPYFCL*VGIQRA
Trigger: GGCCCGCTGGATCCCGACCAAGAGGCAGAAGTACGG...CATTTTGTGAAAGGTATTTATAAGGCCCTTCAAATTTGTGGCTTCCTTTCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp TCTATCTACTGTTCAAAGCCAACAACAATGGCACTATTAGCTAGACTGATTTTTCCGTACTTCTGCCTCTaGGTCGGGATCCAGCGGGCC +
Preference number: 5 (lower is better)
Translates to: SIYCSKPTTMALLARLIFPYFCL*VGIQRA
Trigger: GGCCCGCTGGATCCCGACCAAGAGGCAGAAGTACGG...AAAAATCAGTCTAGCTAATAGTGCCATTGTTGTTGGCTTTGAACAGTAGATAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410074.5
CDS-3UTR CAA 90 bp AGAAGGTATCCAGACAGTGATGTATCCTATCTTCCCAGCCTCTGCTCAAAGACCTCCGGGCTATTGCTGTaGATCTATCAACCAAGTGTG +
Preference number: 5 (lower is better)
Translates to: RRYPDSDVSYLPSLCSKTSGLLL*IYQPSV
Trigger: CACACTTGGTTGATAGATCAACAGCAATAGCCCGGA...GGTCTTTGAGCAGAGGCTGGGAAGATAGGATACATCACTGTCTGGATACCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp CCTGTTACCGCCTTGTTCAGTTTGAGCTGCATATTGGCCAATCAAAGTTTATATTCAGAAGCTGCGAGCTaGCCTCGTGGTCAGGCTTGT +
Preference number: 5 (lower is better)
Translates to: PVTALFSLSCILANQSLYSEAAS*PRGQAC
Trigger: ACAAGCCTGACCACGAGGCAAGCTCGCAGCTTCTGA...ATATAAACTTTGATTGGCCAATATGCAGCTCAAACTGAACAAGGCGGTAACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CAA 90 bp CTTGATGTCTTCCCCAGGAGGCGTGGTACTGGTCATCTTCTCCGCATTGGGGAATTTTTAACAATTTTGTaGCGCTTGGCTTGTGAGAAG +
Preference number: 5 (lower is better)
Translates to: LDVFPRRRGTGHLLRIGEFLTIL*RLACEK
Trigger: CTTCTCACAAGCCAAGCGCAACAAAATTGTTAAAAA...TTCCCCAATGCGGAGAAGATGACCAGTACCACGCCTCCTGGGGAAGACATCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CAA 90 bp ATGGGCATGTGGGAACTTTCTGGGGTGCTGAAAACAGTGTATGTCTCTATCTTAGTCTCAGCCAACTCTTaGCTCAGCTTGATGGCCTTC +
Preference number: 5 (lower is better)
Translates to: MGMWELSGVLKTVYVSILVSANS*LSLMAF
Trigger: GAAGGCCATCAAGCTGAGCAAAGAGTTGGCTGAGAC...TAAGATAGAGACATACACTGTTTTCAGCACCCCAGAAAGTTCCCACATGCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp AGCAGCTGTCTAAGGCACTCGGTGTTGCAGGGAGGGCAAGATCCTTACTGGGATTCTGTTGAAATCTGTTaGACTTCAAACCACTTGAGA +
Preference number: 5 (lower is better)
Translates to: SSCLRHSVLQGGQDPYWDSVEIC*TSNHLR
Trigger: TCTCAAGTGGTTTGAAGTCAAACAGATTTCAACAGA...ATCCCAGTAAGGATCTTGCCCTCCCTGCAACACCGAGTGCCTTAGACAGCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CAA 90 bp CAAGTAGAGCACTCGGGATTGGATGATGAATCTAAACAAGTACTTCAAGGCTTTAGACCCCGTGCGGCTTaGCTTCCTCTCCGTCAAGTT +
Preference number: 5 (lower is better)
Translates to: QVEHSGLDDESKQVLQGFRPRAA*LPLRQV
Trigger: AACTTGACGGAGAGGAAGCAAAGCCGCACGGGGTCT...AAAGCCTTGAAGTACTTGTTTAGATTCATCATCCAATCCCGAGTGCTCTACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CAA 90 bp AGAAGGTATCCAGACAGTGATGTATCCTATCTTCCCAGCCTCTGCTCAAAGACCCATTGTCAGACGAGTTaGAAGAGGTGGAAACCACAG +
Preference number: 5 (lower is better)
Translates to: RRYPDSDVSYLPSLCSKTHCQTS*KRWKPQ
Trigger: CTGTGGTTTCCACCTCTTCAAACTCGTCTGACAATG...GGTCTTTGAGCAGAGGCTGGGAAGATAGGATACATCACTGTCTGGATACCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp ATATGGAGGGCCTCAGTAAAGCTCTGCAAGGATCCTTTCACATGCTCCCAGGCTATGACTCTGGCTGGTTaGTGGAATTCTCAGTTTGTT +
Preference number: 5 (lower is better)
Translates to: IWRASVKLCKDPFTCSQAMTLAG*WNSQFV
Trigger: AACAAACTGAGAATTCCACAAACCAGCCAGAGTCAT...AGCCTGGGAGCATGTGAAAGGATCCTTGCAGAGCTTTACTGAGGCCCTCCATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS CCA 90 bp GATGAGGGTGGCAATCTGAAAGCTGTCTTTAGTGCTATCCTTGCTTaGGGTGAAGGTGACCAGGTTTTTGGATGCTTGAAGCTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: DEGGNLKAVFSAILA*GEGDQVFGCLKLFF
Trigger: GAAAAAGAGCTTCAAGCATCCAAAAACCTGGTCACCTTCACCCCAAGCAAGGATAGCACTAAAGACAGCTTTCAGATTGCCACCCTCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000276440.12
ENST00000444569.5
ENST00000467709.6
CDS-3UTR CAA 90 bp ATGGGCATGTGGGAACTTTCTGGGGTGCTGAAAACAGTGTATGTCTCTATCTTATCTAGGATGTTCCCATaGTCATCTCGCACCACCAGA +
Preference number: 5 (lower is better)
Translates to: MGMWELSGVLKTVYVSILSRMFP*SSRTTR
Trigger: TCTGGTGGTGCGAGATGACAATGGGAACATCCTAGA...TAAGATAGAGACATACACTGTTTTCAGCACCCCAGAAAGTTCCCACATGCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp TTCAGGCAGGAGAGAGCTATTATTTCCATTAAGGTGGAAAGGGAATCATACGGAAGCTTCTCTATTTCCTaGGGCATCCCGTTACTGCCC +
Preference number: 5 (lower is better)
Translates to: FRQERAIISIKVERESYGSFSIS*GIPLLP
Trigger: GGGCAGTAACGGGATGCCCAAGGAAATAGAGAAGCT...TCCGTATGATTCCCTTTCCACCTTAATGGAAATAATAGCTCTCTCCTGCCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTCCATCTTCCGGGCTATaGCTGTTGATCTATCAACCA +
Preference number: 5 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPPSSGL*LLIYQP
Trigger: TGGTTGATAGATCAACAGCAATAGCCCGGAAGATGG...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp CCGTTCCATTATAAGCTGAATGTGCACCGCAGTGGCACCCACATCCTTCCTGTCTTAAAATGCTGGAACTaGATGTCTCCTATCAGTGAA +
Preference number: 5 (lower is better)
Translates to: PFHYKLNVHRSGTHILPVLKCWN*MSPISE
Trigger: TTCACTGATAGGAGACATCAAGTTCCAGCATTTTAA...GACAGGAAGGATGTGGGTGCCACTGCGGTGCACATTCAGCTTATAATGGAACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CAA 90 bp CTGAGTTTCCCAAATGAAAAGACCTACAGTTACAGACACTGGGGATTTCTTTCTTTCAAAGCTGCCCCCTaGATCTTGACGGCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: LSFPNEKTYSYRHWGFLSFKAAP*ILTASS
Trigger: GGAGGAAGCCGTCAAGATCAAGGGGGCAGCTTTGAA...AGAAAGAAATCCCCAGTGTCTGTAACTGTAGGTCTTTTCATTTGGGAAACTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CAA 90 bp GGTTTTGGGCTGGTAAACATCATCCCAGATCAGGAAATGCAGTCAGCAGGGAGCGTTGTCAGGAATGCTTaGAATGAATTTGCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: GFGLVNIIPDQEMQSAGSVVRNA*NEFAEE
Trigger: CTCTTCTGCAAATTCATTCAAAGCATTCCTGACAAC...GCTCCCTGCTGACTGCATTTCCTGATCTGGGATGATGTTTACCAGCCCAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CAA 90 bp ATGGGCATGTGGGAACTTTCTGGGGTGCTGAAAACAGTGTATGTCTCTATCTTATCGTGGTCAGGCTTGTaGGAGTTGTCATCTAACTGG +
Preference number: 5 (lower is better)
Translates to: MGMWELSGVLKTVYVSILSWSGL*ELSSNW
Trigger: CCAGTTAGATGACAACTCCAACAAGCCTGACCACGA...TAAGATAGAGACATACACTGTTTTCAGCACCCCAGAAAGTTCCCACATGCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp ATGCAAGACTTATATGCAGAAAACTTTCACACGCCATTGAAGGGCACAAAAGCACCAATCACTGTCCGGTaGATCCTTCTCAGCAGCCGT +
Preference number: 5 (lower is better)
Translates to: MQDLYAENFHTPLKGTKAPITVR*ILLSSR
Trigger: ACGGCTGCTGAGAAGGATCAACCGGACAGTGATTGG...TGCTTTTGTGCCCTTCAATGGCGTGTGAAAGTTTTCTGCATATAAGTCTTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CAA 90 bp CCATCTCTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAATGGATGGGATGAATTaGATTTTGTGGGGACCCAGG +
Preference number: 5 (lower is better)
Translates to: PSLPRCNMGWDQCVHVRKMDGMN*ILWGPR
Trigger: CCTGGGTCCCCACAAAATCAAATTCATCCCATCCAT...TTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAGAGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CAA 90 bp CAGACTGGTAAGTCCCTTGTAGCCAGTGATTTGCGCTCAGAGGAGGTAATAGGATTTTCCAGAAGAACCTaGTATTGTTCGTCTCCTCTG +
Preference number: 5 (lower is better)
Translates to: QTGKSLVASDLRSEEVIGFSRRT*YCSSPL
Trigger: CAGAGGAGACGAACAATACAAGGTTCTTCTGGAAAA...TCCTATTACCTCCTCTGAGCGCAAATCACTGGCTACAAGGGACTTACCAGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CAA 90 bp TCTGGTTTTGAAAGTGCTGATGTAGTGGCTATAGTGGCTGTCGTCCATTTGCTGGAGCTGGAGAGGTATTaGTGTTTCCGGCAATGTTCT +
Preference number: 5 (lower is better)
Translates to: SGFESADVVAIVAVVHLLELERY*CFRQCS
Trigger: AGAACATTGCCGGAAACACAAATACCTCTCCAGCTC...CAGCAAATGGACGACAGCCACTATAGCCACTACATCAGCACTTTCAAAACCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CAA 90 bp CAGACTGGTAAGTCCCTTGTAGCCAGTGATTTGCGCTCAGAGGAGGTAATAGGACTCCTTGCTCTCATCTaGCATGATGATGGTTCTATA +
Preference number: 5 (lower is better)
Translates to: QTGKSLVASDLRSEEVIGLLALI*HDDGSI
Trigger: TATAGAACCATCATCATGCAAGATGAGAGCAAGGAG...TCCTATTACCTCCTCTGAGCGCAAATCACTGGCTACAAGGGACTTACCAGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CAA 90 bp CCGTTCCATTATAAGCTGAATGTGCACCGCAGTGGCACCCACATCCTTCCTGTCCTTCTCTTTAAGCTCTaGCTGGGTATAAACATAGTA +
Preference number: 5 (lower is better)
Translates to: PFHYKLNVHRSGTHILPVLLFKL*LGINIV
Trigger: TACTATGTTTATACCCAGCAAGAGCTTAAAGAGAAG...GACAGGAAGGATGTGGGTGCCACTGCGGTGCACATTCAGCTTATAATGGAACGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CAA 90 bp GACACATTATTTATGAATTCTGTCAAATGTGACTCTTCCTACCCAACACCTTCCCTAAGGCACTCGGTGTaGCAGGGAGGGCAAGATCCT +
Preference number: 5 (lower is better)
Translates to: DTLFMNSVKCDSSYPTPSLRHSV*QGGQDP
Trigger: AGGATCTTGCCCTCCCTGCAACACCGAGTGCCTTAG...GGAAGGTGTTGGGTAGGAAGAGTCACATTTGACAGAATTCATAAATAATGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTAAAGGAAACCACCATTaGGAGAAGGGCTGTATGTGC +
Preference number: 5 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPKGNHH*EKGCMC
Trigger: GCACATACAGCCCTTCTCCAAATGGTGGTTTCCTTT...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp AATTCCATGTGGACTGGAAGGGAGGTGGCATGGCCTCAAAATTCTATCAAAGAGCAGAGTGAACTGTCTTaGTATACTGGGGCTGTTTCC +
Preference number: 5 (lower is better)
Translates to: NSMWTGREVAWPQNSIKEQSELS*YTGAVS
Trigger: GGAAACAGCCCCAGTATACAAAGACAGTTCACTCTG...CTCTTTGATAGAATTTTGAGGCCATGCCACCTCCCTTCCAGTCCACATGGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp CAGACTGGTAAGTCCCTTGTAGCCAGTGATTTGCGCTCAGAGGAGGTAATAGGAAAAAGCAGTTCAGTCTaGCTGGAGTCATACATATGC +
Preference number: 5 (lower is better)
Translates to: QTGKSLVASDLRSEEVIGKSSSV*LESYIC
Trigger: GCATATGTATGACTCCAGCAAGACTGAACTGCTTTT...TCCTATTACCTCCTCTGAGCGCAAATCACTGGCTACAAGGGACTTACCAGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS TCA 90 bp AAATGTATAGAATTTAGTCTGAAAGGACACTGTACTCCACCCTGTTaGAACAAGCTCTCTGAGCCATTCACCTGCAGAAGCTCAGCGTGC +
Preference number: 5 (lower is better)
Translates to: KCIEFSLKGHCTPPC*NKLSEPFTCRSSAC
Trigger: GCACGCTGAGCTTCTGCAGGTGAATGGCTCAGAGAGCTTGTTTCAACAGGGTGGAGTACAGTGTCCTTTCAGACTAAATTCTATACATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CAA 90 bp AGAAGGTATCCAGACAGTGATGTATCCTATCTTCCCAGCCTCTGCTCAAAGACCGGAGAGCTCCACATCTaGAGAAGCATTGTAGTTATA +
Preference number: 5 (lower is better)
Translates to: RRYPDSDVSYLPSLCSKTGELHI*RSIVVI
Trigger: TATAACTACAATGCTTCTCAAGATGTGGAGCTCTCC...GGTCTTTGAGCAGAGGCTGGGAAGATAGGATACATCACTGTCTGGATACCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp CCATCTCTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTCTGTAAACACTGCTaGGAGGTTATTGAGCTTCTC +
Preference number: 5 (lower is better)
Translates to: PSLPRCNMGWDQCVHVRKVCKHC*EVIELL
Trigger: GAGAAGCTCAATAACCTCCAAGCAGTGTTTACAGAC...TTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAGAGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp AATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACATCTGAGAGCTTTTGCGGATACCCAAAGGCCTaGCCCTTTGTGATTCACTTC +
Preference number: 5 (lower is better)
Translates to: NLHTHFLSNALDTSESFCGYPKA*PFVIHF
Trigger: GAAGTGAATCACAAAGGGCAAGGCCTTTGGGTATCC...GCAAAAGCTCTCAGATGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp AGTTACAGACACTGGGGATTTCTTTCTGATCATACAATGGCGAAATCCACAGTCGGATACCCAAAGGCCTaGCCCTTTGTGATTCACTTC +
Preference number: 5 (lower is better)
Translates to: SYRHWGFLSDHTMAKSTVGYPKA*PFVIHF
Trigger: GAAGTGAATCACAAAGGGCAAGGCCTTTGGGTATCC...GACTGTGGATTTCGCCATTGTATGATCAGAAAGAAATCCCCAGTGTCTGTAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CAA 90 bp AAAAGAGAGAAATTGAAGATGACTATGAGGTTGCCTGAGCAACTAAATGGATGGGCTTTCTCCAAGAGCTaGCCCTCCTCATCGTGCACA +
Preference number: 5 (lower is better)
Translates to: KREKLKMTMRLPEQLNGWAFSKS*PSSSCT
Trigger: TGTGCACGATGAGGAGGGCAAGCTCTTGGAGAAAGC...CCATCCATTTAGTTGCTCAGGCAACCTCATAGTCATCTTCAATTTCTCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CAA 90 bp AGAAGGTATCCAGACAGTGATGTATCCTATCTTCCCAGCCTCTGCTCAAAGACCATAGCAATGGATACCTaGACAGTCTCATACCAACAG +
Preference number: 5 (lower is better)
Translates to: RRYPDSDVSYLPSLCSKTIAMDT*TVSYQQ
Trigger: CTGTTGGTATGAGACTGTCAAGGTATCCATTGCTAT...GGTCTTTGAGCAGAGGCTGGGAAGATAGGATACATCACTGTCTGGATACCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp CAGACTGGTAAGTCCCTTGTAGCCAGTGATTTGCGCTCAGAGGAGGTAATAGGACAGGTTTTTGGATGCTaGAAGCTCTTTTTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: QTGKSLVASDLRSEEVIGQVFGC*KLFFFH
Trigger: ATGGAAGAAAAAGAGCTTCAAGCATCCAAAAACCTG...TCCTATTACCTCCTCTGAGCGCAAATCACTGGCTACAAGGGACTTACCAGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CAA 90 bp CCACACCCCTTCCAGAATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACAAAAAGCAGTTCAGTCTaGCTGGAGTCATCTGCATTA +
Preference number: 5 (lower is better)
Translates to: PHPFQNLHTHFLSNALDTKSSSV*LESSAL
Trigger: TAATGCAGATGACTCCAGCAAGACTGAACTGCTTTT...TGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATTCTGGAAGGGGTGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp CTTTGTGCTTTTCTGGTTGGGCTCATCAAATCGGGTTCTGGTGCTTTCTCTGCAGTGCTCTCTACTATCTaGGTCATGCAGTTAAGTTTC +
Preference number: 5 (lower is better)
Translates to: LCAFLVGLIKSGSGAFSAVLSTI*VMQLSF
Trigger: GAAACTTAACTGCATGACCAAGATAGTAGAGAGCAC...TGCAGAGAAAGCACCAGAACCCGATTTGATGAGCCCAACCAGAAAAGCACAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CAA 90 bp CCTGTTACCGCCTTGTTCAGTTTGAGCTGCATATTGGCCAATCAAAGTTTATATGCCTCGTGGTCAGGCTaGTTGGAGTTGTCATCTAAC +
Preference number: 5 (lower is better)
Translates to: PVTALFSLSCILANQSLYASWSG*LELSSN
Trigger: GTTAGATGACAACTCCAACAAGCCTGACCACGAGGC...ATATAAACTTTGATTGGCCAATATGCAGCTCAAACTGAACAAGGCGGTAACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CAA 90 bp AAAAGAGAGAAATTGAAGATGACTATGAGGTTGCCTGAGCAACTAAATGGATGGGTGGCTGTCGTCCATTaGCTGCAGCAGGGCAATCAT +
Preference number: 5 (lower is better)
Translates to: KREKLKMTMRLPEQLNGWVAVVH*LQQGNH
Trigger: ATGATTGCCCTGCTGCAGCAAATGGACGACAGCCAC...CCATCCATTTAGTTGCTCAGGCAACCTCATAGTCATCTTCAATTTCTCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CAA 90 bp CCATCTCTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGGGATGAATTTGATTTaGTGGGGACCCAGGTTATAC +
Preference number: 5 (lower is better)
Translates to: PSLPRCNMGWDQCVHVRKGMNLI*WGPRLY
Trigger: GTATAACCTGGGTCCCCACAAAATCAAATTCATCCC...TTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAGAGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CAA 90 bp ATGGGCATGTGGGAACTTTCTGGGGTGCTGAAAACAGTGTATGTCTCTATCTTACTCATACGGTTCTCCTaGCTCTCATCTTGCATGATG +
Preference number: 5 (lower is better)
Translates to: MGMWELSGVLKTVYVSILLIRFS*LSSCMM
Trigger: CATCATGCAAGATGAGAGCAAGGAGAACCGTATGAG...TAAGATAGAGACATACACTGTTTTCAGCACCCCAGAAAGTTCCCACATGCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTTCTTTTCTCTTAAACTaGCTGATCCGGTTCTCGCTG +
Preference number: 5 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPSFLLN*LIRFSL
Trigger: CAGCGAGAACCGGATCAGCAAGTTTAAGAGAAAAGA...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CAA 90 bp TTCAGGCAGGAGAGAGCTATTATTTCCATTAAGGTGGAAAGGGAATCATACGGATACCTGGAATCCCTTTaGTTCAGGCAGGAGAGAGCT +
Preference number: 5 (lower is better)
Translates to: FRQERAIISIKVERESYGYLESL*FRQERA
Trigger: AGCTCTCTCCTGCCTGAACAAAAGGGATTCCAGGTA...TCCGTATGATTCCCTTTCCACCTTAATGGAAATAATAGCTCTCTCCTGCCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp CAGACTGGTAAGTCCCTTGTAGCCAGTGATTTGCGCTCAGAGGAGGTAATAGGATTCTACATTAGGAAATaGCAGTGTGGCTGCAGTTTT +
Preference number: 5 (lower is better)
Translates to: QTGKSLVASDLRSEEVIGFYIRK*QCGCSF
Trigger: AAAACTGCAGCCACACTGCAATTTCCTAATGTAGAA...TCCTATTACCTCCTCTGAGCGCAAATCACTGGCTACAAGGGACTTACCAGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS GCA 90 bp GGCTTTCAACGCAGCAAAAAGCAGTTCAGTCTTGCTGGAGTCATCTaGATTAGCCACATAGAAGTTCAGTACCTTGGAGAGTTTCACATA +
Preference number: 5 (lower is better)
Translates to: GFQRSKKQFSLAGVI*ISHIEVQYLGEFHI
Trigger: TATGTGAAACTCTCCAAGGTACTGAACTTCTATGTGGCTAATGCAGATGACTCCAGCAAGACTGAACTGCTTTTTGCTGCGTTGAAAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000444569.5
CDS-3UTR CAA 90 bp AGTTACAGACACTGGGGATTTCTTTCTGATCATACAATGGCGAAATCCACAGTCTCCGGGCTATTGCTGTaGATCTATCAACCAAGTGTG +
Preference number: 5 (lower is better)
Translates to: SYRHWGFLSDHTMAKSTVSGLLL*IYQPSV
Trigger: CACACTTGGTTGATAGATCAACAGCAATAGCCCGGA...GACTGTGGATTTCGCCATTGTATGATCAGAAAGAAATCCCCAGTGTCTGTAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CAA 90 bp AGTTACAGACACTGGGGATTTCTTTCTGATCATACAATGGCGAAATCCACAGTCGTCTTCTTCTTCCCTTaGTCAAACTCACCGTGGATC +
Preference number: 5 (lower is better)
Translates to: SYRHWGFLSDHTMAKSTVVFFFP*SNSPWI
Trigger: GATCCACGGTGAGTTTGACAAAGGGAAGAAGAAGAC...GACTGTGGATTTCGCCATTGTATGATCAGAAAGAAATCCCCAGTGTCTGTAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CAA 90 bp GACACATTATTTATGAATTCTGTCAAATGTGACTCTTCCTACCCAACACCTTCCCAGCACCAGGGTGAATaGCTTTCTCCAAGAGCTTGC +
Preference number: 5 (lower is better)
Translates to: DTLFMNSVKCDSSYPTPSQHQGE*LSPRAC
Trigger: GCAAGCTCTTGGAGAAAGCAATTCACCCTGGTGCTG...GGAAGGTGTTGGGTAGGAAGAGTCACATTTGACAGAATTCATAAATAATGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp AAAAGAGAGAAATTGAAGATGACTATGAGGTTGCCTGAGCAACTAAATGGATGGCAGCACCAGGGTGAATaGCTTTCTCCAAGAGCTTGC +
Preference number: 5 (lower is better)
Translates to: KREKLKMTMRLPEQLNGWQHQGE*LSPRAC
Trigger: GCAAGCTCTTGGAGAAAGCAATTCACCCTGGTGCTG...CCATCCATTTAGTTGCTCAGGCAACCTCATAGTCATCTTCAATTTCTCTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CAA 90 bp AAAAGAGAGAAATTGAAGATGACTATGAGGTTGCCTGAGCAACTAAATGGATGGTCAGGCTTGTTGGAGTaGTCATCTAACTGGCCGCTG +
Preference number: 5 (lower is better)
Translates to: KREKLKMTMRLPEQLNGWSGLLE*SSNWPL
Trigger: CAGCGGCCAGTTAGATGACAACTCCAACAAGCCTGA...CCATCCATTTAGTTGCTCAGGCAACCTCATAGTCATCTTCAATTTCTCTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CAA 90 bp AATTCCATGTGGACTGGAAGGGAGGTGGCATGGCCTCAAAATTCTATCAAAGAGGAAGTCGATGATGTCTaGTCTGGTTTTGAAAGTGCT +
Preference number: 5 (lower is better)
Translates to: NSMWTGREVAWPQNSIKEEVDDV*SGFESA
Trigger: AGCACTTTCAAAACCAGACAAGACATCATCGACTTC...CTCTTTGATAGAATTTTGAGGCCATGCCACCTCCCTTCCAGTCCACATGGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CAA 90 bp AATTCCATGTGGACTGGAAGGGAGGTGGCATGGCCTCAAAATTCTATCAAAGAGACAATTTTGTTGCGCTaGGCTTGTGAGAAGGTTTCA +
Preference number: 5 (lower is better)
Translates to: NSMWTGREVAWPQNSIKETILLR*ACEKVS
Trigger: TGAAACCTTCTCACAAGCCAAGCGCAACAAAATTGT...CTCTTTGATAGAATTTTGAGGCCATGCCACCTCCCTTCCAGTCCACATGGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CAA 90 bp CCATCTCTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAATTTTCCAGAAGAACCTaGTATTGTTCGTCTCCTCTG +
Preference number: 5 (lower is better)
Translates to: PSLPRCNMGWDQCVHVRKFSRRT*YCSSPL
Trigger: CAGAGGAGACGAACAATACAAGGTTCTTCTGGAAAA...TTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAGAGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CAA 90 bp AATTCCATGTGGACTGGAAGGGAGGTGGCATGGCCTCAAAATTCTATCAAAGAGCTCCTTGCTCTCATCTaGCATGATGATGGTTCTATA +
Preference number: 5 (lower is better)
Translates to: NSMWTGREVAWPQNSIKELLALI*HDDGSI
Trigger: TATAGAACCATCATCATGCAAGATGAGAGCAAGGAG...CTCTTTGATAGAATTTTGAGGCCATGCCACCTCCCTTCCAGTCCACATGGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CAA 90 bp CAGACTGGTAAGTCCCTTGTAGCCAGTGATTTGCGCTCAGAGGAGGTAATAGGATCTGTTGAAATCTGTTaGACTTCAAACCACTTGAGA +
Preference number: 5 (lower is better)
Translates to: QTGKSLVASDLRSEEVIGSVEIC*TSNHLR
Trigger: TCTCAAGTGGTTTGAAGTCAAACAGATTTCAACAGA...TCCTATTACCTCCTCTGAGCGCAAATCACTGGCTACAAGGGACTTACCAGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CAA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTTTTTCTACTTTCTCCTaGAGTTCCCGGAAGCAAGAA +
Preference number: 5 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPFSTFS*SSRKQE
Trigger: TTCTTGCTTCCGGGAACTCAAGGAGAAAGTAGAAAA...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CAA 90 bp CCATCTCTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGCTACCAAAGTGTACTaGATATCCATCTCTTCCAAG +
Preference number: 5 (lower is better)
Translates to: PSLPRCNMGWDQCVHVRKATKVY*ISISSK
Trigger: CTTGGAAGAGATGGATATCAAGTACACTTTGGTAGC...TTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAGAGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CAA 90 bp AATTCCATGTGGACTGGAAGGGAGGTGGCATGGCCTCAAAATTCTATCAAAGAGAAGGACTCTTCCAGCTaGGAAAGAGTAAACAAAGGT +
Preference number: 5 (lower is better)
Translates to: NSMWTGREVAWPQNSIKEKDSSS*ERVNKG
Trigger: ACCTTTGTTTACTCTTTCCAAGCTGGAAGAGTCCTT...CTCTTTGATAGAATTTTGAGGCCATGCCACCTCCCTTCCAGTCCACATGGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp AGAAGGTATCCAGACAGTGATGTATCCTATCTTCCCAGCCTCTGCTCAAAGACCAAGGAAGCCACAAATTaGAAGGGCCTTATAAATACC +
Preference number: 5 (lower is better)
Translates to: RRYPDSDVSYLPSLCSKTKEATN*KGLINT
Trigger: GGTATTTATAAGGCCCTTCAAATTTGTGGCTTCCTT...GGTCTTTGAGCAGAGGCTGGGAAGATAGGATACATCACTGTCTGGATACCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp CCTGTTACCGCCTTGTTCAGTTTGAGCTGCATATTGGCCAATCAAAGTTTATATCTGCAAACCTCCGCCTaGCAGGTTCAAATGATTCTC +
Preference number: 5 (lower is better)
Translates to: PVTALFSLSCILANQSLYLQTSA*QVQMIL
Trigger: GAGAATCATTTGAACCTGCAAGGCGGAGGTTTGCAG...ATATAAACTTTGATTGGCCAATATGCAGCTCAAACTGAACAAGGCGGTAACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CAA 90 bp TTGTCAGAGGCAGAACTCCCCTGCAGCCTAACAAGTTCCCCTGATTCATATGCACCAACATCAAGGACTTaGAATAAAGTCTTCTGTTCA +
Preference number: 5 (lower is better)
Translates to: LSEAELPCSLTSSPDSYAPTSRT*NKVFCS
Trigger: TGAACAGAAGACTTTATTCAAAGTCCTTGATGTTGG...TGCATATGAATCAGGGGAACTTGTTAGGCTGCAGGGGAGTTCTGCCTCTGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR CAA 90 bp TGGGGGAACCCTATCTATCTACTGTTCAAAGCCAACAACAATGGCACTATTAGCGGAGAGCTCCACATCTaGAGAAGCATTGTAGTTATA +
Preference number: 5 (lower is better)
Translates to: WGNPIYLLFKANNNGTISGELHI*RSIVVI
Trigger: TATAACTACAATGCTTCTCAAGATGTGGAGCTCTCC...GCTAATAGTGCCATTGTTGTTGGCTTTGAACAGTAGATAGATAGGGTTCCCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410074.5
CDS-3UTR CAA 90 bp TCTCAAAGCCTGCTTTATATCTTGTTCTACATTAGGAAATTGCAGTGTGGCTGCGCATCTTCCCCGATGTaGCAGACAAAGTTCTTGAAG +
Preference number: 5 (lower is better)
Translates to: SQSLLYILFYIRKLQCGCASSPM*QTKFLK
Trigger: CTTCAAGAACTTTGTCTGCAACATCGGGGAAGATGC...GCAGCCACACTGCAATTTCCTAATGTAGAACAAGATATAAAGCAGGCTTTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp ATGCAAGACTTATATGCAGAAAACTTTCACACGCCATTGAAGGGCACAAAAGCAGCATCTTCCCCGATGTaGCAGACAAAGTTCTTGAAG +
Preference number: 5 (lower is better)
Translates to: MQDLYAENFHTPLKGTKAASSPM*QTKFLK
Trigger: CTTCAAGAACTTTGTCTGCAACATCGGGGAAGATGC...TGCTTTTGTGCCCTTCAATGGCGTGTGAAAGTTTTCTGCATATAAGTCTTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CAA 90 bp AATTCCATGTGGACTGGAAGGGAGGTGGCATGGCCTCAAAATTCTATCAAAGAGGGTTTCCATCGCAATTaGCTGAAAGGGAATAAAATG +
Preference number: 5 (lower is better)
Translates to: NSMWTGREVAWPQNSIKEGFHRN*LKGNKM
Trigger: CATTTTATTCCCTTTCAGCAAATTGCGATGGAAACC...CTCTTTGATAGAATTTTGAGGCCATGCCACCTCCCTTCCAGTCCACATGGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp CTGAGTTTCCCAAATGAAAAGACCTACAGTTACAGACACTGGGGATTTCTTTCTCCATCTTCCGGGCTATaGCTGTTGATCTATCAACCA +
Preference number: 5 (lower is better)
Translates to: LSFPNEKTYSYRHWGFLSPSSGL*LLIYQP
Trigger: TGGTTGATAGATCAACAGCAATAGCCCGGAAGATGG...AGAAAGAAATCCCCAGTGTCTGTAACTGTAGGTCTTTTCATTTGGGAAACTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CAA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTTTAATGTTCTGGGAGTaGGAACGCCAATTTAACAAG +
Preference number: 5 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPLMFWE*ERQFNK
Trigger: CTTGTTAAATTGGCGTTCCAACTCCCAGAACATTAA...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CAA 90 bp AATTCCATGTGGACTGGAAGGGAGGTGGCATGGCCTCAAAATTCTATCAAAGAGGTTGTCAGGAATGCTTaGAATGAATTTGCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: NSMWTGREVAWPQNSIKEVVRNA*NEFAEE
Trigger: CTCTTCTGCAAATTCATTCAAAGCATTCCTGACAAC...CTCTTTGATAGAATTTTGAGGCCATGCCACCTCCCTTCCAGTCCACATGGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CAA 90 bp AAAAGAGAGAAATTGAAGATGACTATGAGGTTGCCTGAGCAACTAAATGGATGGTCGTGGTCAGGCTTGTaGGAGTTGTCATCTAACTGG +
Preference number: 5 (lower is better)
Translates to: KREKLKMTMRLPEQLNGWSWSGL*ELSSNW
Trigger: CCAGTTAGATGACAACTCCAACAAGCCTGACCACGA...CCATCCATTTAGTTGCTCAGGCAACCTCATAGTCATCTTCAATTTCTCTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CAA 90 bp TCTCTAGTCATAAATAATCATGTAAAAGACCTCAAAGGAAACCACCATTTGGAGGTGGCTGTCGTCCATTaGCTGCAGCAGGGCAATCAT +
Preference number: 5 (lower is better)
Translates to: SLVINNHVKDLKGNHHLEVAVVH*LQQGNH
Trigger: ATGATTGCCCTGCTGCAGCAAATGGACGACAGCCAC...CTCCAAATGGTGGTTTCCTTTGAGGTCTTTTACATGATTATTTATGACTAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp ATGGGCATGTGGGAACTTTCTGGGGTGCTGAAAACAGTGTATGTCTCTATCTTAGAAGTCGATGATGTCTaGTCTGGTTTTGAAAGTGCT +
Preference number: 5 (lower is better)
Translates to: MGMWELSGVLKTVYVSILEVDDV*SGFESA
Trigger: AGCACTTTCAAAACCAGACAAGACATCATCGACTTC...TAAGATAGAGACATACACTGTTTTCAGCACCCCAGAAAGTTCCCACATGCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp CTGAGTTTCCCAAATGAAAAGACCTACAGTTACAGACACTGGGGATTTCTTTCTATGGATGGGATGAATTaGATTTTGTGGGGACCCAGG +
Preference number: 5 (lower is better)
Translates to: LSFPNEKTYSYRHWGFLSMDGMN*ILWGPR
Trigger: CCTGGGTCCCCACAAAATCAAATTCATCCCATCCAT...AGAAAGAAATCCCCAGTGTCTGTAACTGTAGGTCTTTTCATTTGGGAAACTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CAA 90 bp ATGCAAGACTTATATGCAGAAAACTTTCACACGCCATTGAAGGGCACAAAAGCAGAGCTGGAGAGGTATTaGTGTTTCCGGCAATGTTCT +
Preference number: 5 (lower is better)
Translates to: MQDLYAENFHTPLKGTKAELERY*CFRQCS
Trigger: AGAACATTGCCGGAAACACAAATACCTCTCCAGCTC...TGCTTTTGTGCCCTTCAATGGCGTGTGAAAGTTTTCTGCATATAAGTCTTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CAA 90 bp ATGCAAGACTTATATGCAGAAAACTTTCACACGCCATTGAAGGGCACAAAAGCACTCATACGGTTCTCCTaGCTCTCATCTTGCATGATG +
Preference number: 5 (lower is better)
Translates to: MQDLYAENFHTPLKGTKALIRFS*LSSCMM
Trigger: CATCATGCAAGATGAGAGCAAGGAGAACCGTATGAG...TGCTTTTGTGCCCTTCAATGGCGTGTGAAAGTTTTCTGCATATAAGTCTTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CAA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTATCGTAGCAAATTCATaGTCTGGATCCTTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPIVANS*SGSFSP
Trigger: AGGAGAAAAGGATCCAGACAATGAATTTGCTACGAT...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CAA 90 bp TCTGGTTTTGAAAGTGCTGATGTAGTGGCTATAGTGGCTGTCGTCCATTTGCTGATCGTAGCAAATTCATaGTCTGGATCCTTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: SGFESADVVAIVAVVHLLIVANS*SGSFSP
Trigger: AGGAGAAAAGGATCCAGACAATGAATTTGCTACGAT...CAGCAAATGGACGACAGCCACTATAGCCACTACATCAGCACTTTCAAAACCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS-3UTR CAA 90 bp GACACATTATTTATGAATTCTGTCAAATGTGACTCTTCCTACCCAACACCTTCCGCAATGACCTGGGACTaGCTCAGACTCCAGTCTTTT +
Preference number: 5 (lower is better)
Translates to: DTLFMNSVKCDSSYPTPSAMTWD*LRLQSF
Trigger: AAAAGACTGGAGTCTGAGCAAGTCCCAGGTCATTGC...GGAAGGTGTTGGGTAGGAAGAGTCACATTTGACAGAATTCATAAATAATGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp AATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACATCTGAGAGCTTTTGCTTTGTGCTTTTCTGGTaGGGCTCATCAAATCGGGTT +
Preference number: 5 (lower is better)
Translates to: NLHTHFLSNALDTSESFCFVLFW*GSSNRV
Trigger: AACCCGATTTGATGAGCCCAACCAGAAAAGCACAAA...GCAAAAGCTCTCAGATGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp CCACACCCCTTCCAGAATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACATCCTTTCTCTACAGCTaGAGTTCTCTCCATTTAAAA +
Preference number: 5 (lower is better)
Translates to: PHPFQNLHTHFLSNALDTSFLYS*SSLHLK
Trigger: TTTTAAATGGAGAGAACTCAAGCTGTAGAGAAAGGA...TGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATTCTGGAAGGGGTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp ATGCAAGACTTATATGCAGAAAACTTTCACACGCCATTGAAGGGCACAAAAGCAACCGCCTTGTTCAGTTaGAGCTGCATATTGGCCAAT +
Preference number: 5 (lower is better)
Translates to: MQDLYAENFHTPLKGTKATALFS*SCILAN
Trigger: ATTGGCCAATATGCAGCTCAAACTGAACAAGGCGGT...TGCTTTTGTGCCCTTCAATGGCGTGTGAAAGTTTTCTGCATATAAGTCTTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CAA 90 bp TCTCTAGTCATAAATAATCATGTAAAAGACCTCAAAGGAAACCACCATTTGGAGTTTTCCTCAATCCTTTaGGAGGCCACCTCATGGGCC +
Preference number: 5 (lower is better)
Translates to: SLVINNHVKDLKGNHHLEFSSIL*EATSWA
Trigger: GGCCCATGAGGTGGCCTCCAAAAGGATTGAGGAAAA...CTCCAAATGGTGGTTTCCTTTGAGGTCTTTTACATGATTATTTATGACTAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp CTTCCAAGATGCAATATGGGATGGGATCAGTGTGTCCACGTGAGAAAAGTACCTTGTGATTCACTTCCTTaGCTGCAATCACTTTATTCA +
Preference number: 5 (lower is better)
Translates to: LPRCNMGWDQCVHVRKVPCDSLP*LQSLYS
Trigger: TGAATAAAGTGATTGCAGCAAAGGAAGTGAATCACA...AGGTACTTTTCTCACGTGGACACACTGATCCCATCCCATATTGCATCTTGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp GACACATTATTTATGAATTCTGTCAAATGTGACTCTTCCTACCCAACACCTTCCGTCTTCTTCTTCCCTTaGTCAAACTCACCGTGGATC +
Preference number: 5 (lower is better)
Translates to: DTLFMNSVKCDSSYPTPSVFFFP*SNSPWI
Trigger: GATCCACGGTGAGTTTGACAAAGGGAAGAAGAAGAC...GGAAGGTGTTGGGTAGGAAGAGTCACATTTGACAGAATTCATAAATAATGTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp AATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACATCTGAGAGCTTTTGCGTAGAGCACTCGGGATaGGATGATGAATCTAAACAA +
Preference number: 5 (lower is better)
Translates to: NLHTHFLSNALDTSESFCVEHSG*DDESKQ
Trigger: TTGTTTAGATTCATCATCCAATCCCGAGTGCTCTAC...GCAAAAGCTCTCAGATGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp TTCAGGCAGGAGAGAGCTATTATTTCCATTAAGGTGGAAAGGGAATCATACGGAGTGCTCTCTACTATCTaGGTCATGCAGTTAAGTTTC +
Preference number: 5 (lower is better)
Translates to: FRQERAIISIKVERESYGVLSTI*VMQLSF
Trigger: GAAACTTAACTGCATGACCAAGATAGTAGAGAGCAC...TCCGTATGATTCCCTTTCCACCTTAATGGAAATAATAGCTCTCTCCTGCCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp ATGCAAGACTTATATGCAGAAAACTTTCACACGCCATTGAAGGGCACAAAAGCAGGGATGAATTTGATTTaGTGGGGACCCAGGTTATAC +
Preference number: 5 (lower is better)
Translates to: MQDLYAENFHTPLKGTKAGMNLI*WGPRLY
Trigger: GTATAACCTGGGTCCCCACAAAATCAAATTCATCCC...TGCTTTTGTGCCCTTCAATGGCGTGTGAAAGTTTTCTGCATATAAGTCTTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CAA 90 bp AATTCCATGTGGACTGGAAGGGAGGTGGCATGGCCTCAAAATTCTATCAAAGAGCTTCTCTTTAAGCTCTaGCTGGGTATAAACATAGTA +
Preference number: 5 (lower is better)
Translates to: NSMWTGREVAWPQNSIKELLFKL*LGINIV
Trigger: TACTATGTTTATACCCAGCAAGAGCTTAAAGAGAAG...CTCTTTGATAGAATTTTGAGGCCATGCCACCTCCCTTCCAGTCCACATGGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000467709.6
CDS-3UTR CAA 90 bp GACACATTATTTATGAATTCTGTCAAATGTGACTCTTCCTACCCAACACCTTCCTCAACTGGAGACTCTTaGGCCTTTGTGCTTTTCTGG +
Preference number: 5 (lower is better)
Translates to: DTLFMNSVKCDSSYPTPSSTGDS*AFVLFW
Trigger: CCAGAAAAGCACAAAGGCCAAAGAGTCTCCAGTTGA...GGAAGGTGTTGGGTAGGAAGAGTCACATTTGACAGAATTCATAAATAATGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp TCTCTAGTCATAAATAATCATGTAAAAGACCTCAAAGGAAACCACCATTTGGAGAGAACTTGTCCAGGCTaGTGCAGACCACCATGTCTC +
Preference number: 5 (lower is better)
Translates to: SLVINNHVKDLKGNHHLERTCPG*CRPPCL
Trigger: GAGACATGGTGGTCTGCACAAGCCTGGACAAGTTCT...CTCCAAATGGTGGTTTCCTTTGAGGTCTTTTACATGATTATTTATGACTAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp TTCAGGCAGGAGAGAGCTATTATTTCCATTAAGGTGGAAAGGGAATCATACGGAGCTACCAAAGTGTACTaGATATCCATCTCTTCCAAG +
Preference number: 5 (lower is better)
Translates to: FRQERAIISIKVERESYGATKVY*ISISSK
Trigger: CTTGGAAGAGATGGATATCAAGTACACTTTGGTAGC...TCCGTATGATTCCCTTTCCACCTTAATGGAAATAATAGCTCTCTCCTGCCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp ATGGGCATGTGGGAACTTTCTGGGGTGCTGAAAACAGTGTATGTCTCTATCTTAGGGACATTTCAAATATaGTTCCAACCAGGGGTAAAT +
Preference number: 5 (lower is better)
Translates to: MGMWELSGVLKTVYVSILGTFQI*FQPGVN
Trigger: ATTTACCCCTGGTTGGAACAATATTTGAAATGTCCC...TAAGATAGAGACATACACTGTTTTCAGCACCCCAGAAAGTTCCCACATGCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp TTCAGGCAGGAGAGAGCTATTATTTCCATTAAGGTGGAAAGGGAATCATACGGAACAGTCTTTATAGCCTaGTTTTGTGTTGATGGTGGG +
Preference number: 5 (lower is better)
Translates to: FRQERAIISIKVERESYGTVFIA*FCVDGG
Trigger: CCCACCATCAACACAAAACAAGGCTATAAAGACTGT...TCCGTATGATTCCCTTTCCACCTTAATGGAAATAATAGCTCTCTCCTGCCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp CCTGGGGGAACCCTATCTATCTACTGTTCAAAGCCAACAACAATGGCACTATTATTTTATATCAGAGACTaGAGCATCCATGGATTTCGG +
Preference number: 5 (lower is better)
Translates to: PGGTLSIYCSKPTTMALLFYIRD*SIHGFR
Trigger: CCGAAATCCATGGATGCTCAAGTCTCTGATATAAAA...TAATAGTGCCATTGTTGTTGGCTTTGAACAGTAGATAGATAGGGTTCCCCCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410074.5
CDS-3UTR CAA 90 bp TATGACTCTGGCTGGTTTGTGGAATTCTCAGTTTGTTCTACTTGTCTGCAGTGGTCCTATCTGACAATCTaGCAGCTTAGAATCTTTCCT +
Preference number: 5 (lower is better)
Translates to: YDSGWFVEFSVCSTCLQWSYLTI*QLRIFP
Trigger: AGGAAAGATTCTAAGCTGCAAGATTGTCAGATAGGA...CCACTGCAGACAAGTAGAACAAACTGAGAATTCCACAAACCAGCCAGAGTCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS-3UTR CAA 90 bp CTTCTGTTCAGCTCCTATCTGACAATCTTGCAGCTTAGAATCTTTCCTTCTCTGGACTGCACATATATTTaGGCATTGCTGACACAAGGA +
Preference number: 5 (lower is better)
Translates to: LLFSSYLTILQLRIFPSLDCTYI*ALLTQG
Trigger: TCCTTGTGTCAGCAATGCCAAAATATATGTGCAGTC...CAGAGAAGGAAAGATTCTAAGCTGCAAGATTGTCAGATAGGAGCTGAACAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481100.5
CDS CCA 90 bp CCTCCATCCACTTCCATTAACTTCTTTAGGTTGTGTTTAATGTTCTaGGAGTTGGAACGCCAATTTAACAAGCCTAACAGGTCAACATTC +
Preference number: 5 (lower is better)
Translates to: PPSTSINFFRLCLMF*ELERQFNKPNRSTF
Trigger: GAATGTTGACCTGTTAGGCTTGTTAAATTGGCGTTCCAACTCCCAGAACATTAAACACAACCTAAAGAAGTTAATGGAAGTGGATGGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276440.12
ENST00000444569.5
ENST00000467709.6
CDS-3UTR CAA 90 bp ATGCAAGACTTATATGCAGAAAACTTTCACACGCCATTGAAGGGCACAAAAGCAATAGCAATGGATACCTaGACAGTCTCATACCAACAG +
Preference number: 5 (lower is better)
Translates to: MQDLYAENFHTPLKGTKAIAMDT*TVSYQQ
Trigger: CTGTTGGTATGAGACTGTCAAGGTATCCATTGCTAT...TGCTTTTGTGCCCTTCAATGGCGTGTGAAAGTTTTCTGCATATAAGTCTTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CAA 90 bp AGTTACAGACACTGGGGATTTCTTTCTGATCATACAATGGCGAAATCCACAGTCCAGGTTTTTGGATGCTaGAAGCTCTTTTTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: SYRHWGFLSDHTMAKSTVQVFGC*KLFFFH
Trigger: ATGGAAGAAAAAGAGCTTCAAGCATCCAAAAACCTG...GACTGTGGATTTCGCCATTGTATGATCAGAAAGAAATCCCCAGTGTCTGTAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CAA 90 bp CCTGTTACCGCCTTGTTCAGTTTGAGCTGCATATTGGCCAATCAAAGTTTATATGTAGAGCACTCGGGATaGGATGATGAATCTAAACAA +
Preference number: 5 (lower is better)
Translates to: PVTALFSLSCILANQSLYVEHSG*DDESKQ
Trigger: TTGTTTAGATTCATCATCCAATCCCGAGTGCTCTAC...ATATAAACTTTGATTGGCCAATATGCAGCTCAAACTGAACAAGGCGGTAACAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CAA 90 bp AGTTACAGACACTGGGGATTTCTTTCTGATCATACAATGGCGAAATCCACAGTCGTTGTCAGGAATGCTTaGAATGAATTTGCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: SYRHWGFLSDHTMAKSTVVVRNA*NEFAEE
Trigger: CTCTTCTGCAAATTCATTCAAAGCATTCCTGACAAC...GACTGTGGATTTCGCCATTGTATGATCAGAAAGAAATCCCCAGTGTCTGTAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CAA 90 bp ATGCAAGACTTATATGCAGAAAACTTTCACACGCCATTGAAGGGCACAAAAGCAGTGCTCTCTACTATCTaGGTCATGCAGTTAAGTTTC +
Preference number: 5 (lower is better)
Translates to: MQDLYAENFHTPLKGTKAVLSTI*VMQLSF
Trigger: GAAACTTAACTGCATGACCAAGATAGTAGAGAGCAC...TGCTTTTGTGCCCTTCAATGGCGTGTGAAAGTTTTCTGCATATAAGTCTTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CAA 90 bp CTGAGTTTCCCAAATGAAAAGACCTACAGTTACAGACACTGGGGATTTCTTTCTGAAGTCGATGATGTCTaGTCTGGTTTTGAAAGTGCT +
Preference number: 5 (lower is better)
Translates to: LSFPNEKTYSYRHWGFLSEVDDV*SGFESA
Trigger: AGCACTTTCAAAACCAGACAAGACATCATCGACTTC...AGAAAGAAATCCCCAGTGTCTGTAACTGTAGGTCTTTTCATTTGGGAAACTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CAA 90 bp CTGAGTTTCCCAAATGAAAAGACCTACAGTTACAGACACTGGGGATTTCTTTCTACAATTTTGTTGCGCTaGGCTTGTGAGAAGGTTTCA +
Preference number: 5 (lower is better)
Translates to: LSFPNEKTYSYRHWGFLSTILLR*ACEKVS
Trigger: TGAAACCTTCTCACAAGCCAAGCGCAACAAAATTGT...AGAAAGAAATCCCCAGTGTCTGTAACTGTAGGTCTTTTCATTTGGGAAACTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CAA 90 bp CCTGTTACCGCCTTGTTCAGTTTGAGCTGCATATTGGCCAATCAAAGTTTATATTTTTCCAGAAGAACCTaGTATTGTTCGTCTCCTCTG +
Preference number: 5 (lower is better)
Translates to: PVTALFSLSCILANQSLYFSRRT*YCSSPL
Trigger: CAGAGGAGACGAACAATACAAGGTTCTTCTGGAAAA...ATATAAACTTTGATTGGCCAATATGCAGCTCAAACTGAACAAGGCGGTAACAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CAA 90 bp CTGAGTTTCCCAAATGAAAAGACCTACAGTTACAGACACTGGGGATTTCTTTCTCTCCTTGCTCTCATCTaGCATGATGATGGTTCTATA +
Preference number: 5 (lower is better)
Translates to: LSFPNEKTYSYRHWGFLSLLALI*HDDGSI
Trigger: TATAGAACCATCATCATGCAAGATGAGAGCAAGGAG...AGAAAGAAATCCCCAGTGTCTGTAACTGTAGGTCTTTTCATTTGGGAAACTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CAA 90 bp TCTCAAAGCCTGCTTTATATCTTGTTCTACATTAGGAAATTGCAGTGTGGCTGCGCCTTCTCCCACATTTaGCCTTTGTCGAAATATGAT +
Preference number: 5 (lower is better)
Translates to: SQSLLYILFYIRKLQCGCAFSHI*PLSKYD
Trigger: ATCATATTTCGACAAAGGCAAAATGTGGGAGAAGGC...GCAGCCACACTGCAATTTCCTAATGTAGAACAAGATATAAAGCAGGCTTTGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp ATGAGAAAGGAAGCCACAAATTTGAAGGGCCTTATAAATACCTTTCACAAAATGGGTCTGGAAGGAGCATaGTCAGACGAGTTTGAAGAG +
Preference number: 5 (lower is better)
Translates to: MRKEATNLKGLINTFHKMGLEGA*SDEFEE
Trigger: CTCTTCAAACTCGTCTGACAATGCTCCTTCCAGACC...CATTTTGTGAAAGGTATTTATAAGGCCCTTCAAATTTGTGGCTTCCTTTCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp TCTCTAGTCATAAATAATCATGTAAAAGACCTCAAAGGAAACCACCATTTGGAGCTGGGGCTGTTTCCATaGAACACACTCAACCACTAC +
Preference number: 5 (lower is better)
Translates to: SLVINNHVKDLKGNHHLELGLFP*NTLNHY
Trigger: GTAGTGGTTGAGTGTGTTCAATGGAAACAGCCCCAG...CTCCAAATGGTGGTTTCCTTTGAGGTCTTTTACATGATTATTTATGACTAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp TCTCAAAGCCTGCTTTATATCTTGTTCTACATTAGGAAATTGCAGTGTGGCTGCTGGACCTCAAAGCCTTaGTACAGAAAACTAGTTTCC +
Preference number: 5 (lower is better)
Translates to: SQSLLYILFYIRKLQCGCWTSKP*YRKLVS
Trigger: GGAAACTAGTTTTCTGTACAAAGGCTTTGAGGTCCA...GCAGCCACACTGCAATTTCCTAATGTAGAACAAGATATAAAGCAGGCTTTGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp ATGAGAAAGGAAGCCACAAATTTGAAGGGCCTTATAAATACCTTTCACAAAATGCGAGGTTCTGCAGGATaGACTTCTCTTCTTGGATCT +
Preference number: 5 (lower is better)
Translates to: MRKEATNLKGLINTFHKMRGSAG*TSLLGS
Trigger: AGATCCAAGAAGAGAAGTCAATCCTGCAGAACCTCG...CATTTTGTGAAAGGTATTTATAAGGCCCTTCAAATTTGTGGCTTCCTTTCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp ATGCAAGACTTATATGCAGAAAACTTTCACACGCCATTGAAGGGCACAAAAGCAGGTTTCCATCGCAATTaGCTGAAAGGGAATAAAATG +
Preference number: 5 (lower is better)
Translates to: MQDLYAENFHTPLKGTKAGFHRN*LKGNKM
Trigger: CATTTTATTCCCTTTCAGCAAATTGCGATGGAAACC...TGCTTTTGTGCCCTTCAATGGCGTGTGAAAGTTTTCTGCATATAAGTCTTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CAA 90 bp CTGAGTTTCCCAAATGAAAAGACCTACAGTTACAGACACTGGGGATTTCTTTCTTTAATGTTCTGGGAGTaGGAACGCCAATTTAACAAG +
Preference number: 5 (lower is better)
Translates to: LSFPNEKTYSYRHWGFLSLMFWE*ERQFNK
Trigger: CTTGTTAAATTGGCGTTCCAACTCCCAGAACATTAA...AGAAAGAAATCCCCAGTGTCTGTAACTGTAGGTCTTTTCATTTGGGAAACTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CAA 90 bp AAAAGAGAGAAATTGAAGATGACTATGAGGTTGCCTGAGCAACTAAATGGATGGAAAAGCAGTTCAGTCTaGCTGGAGTCATCTGCATTA +
Preference number: 5 (lower is better)
Translates to: KREKLKMTMRLPEQLNGWKSSSV*LESSAL
Trigger: TAATGCAGATGACTCCAGCAAGACTGAACTGCTTTT...CCATCCATTTAGTTGCTCAGGCAACCTCATAGTCATCTTCAATTTCTCTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CAA 90 bp AGTTACAGACACTGGGGATTTCTTTCTGATCATACAATGGCGAAATCCACAGTCTTTCCAATCAGGTCCTaGAACATGATAAAAGTTTCC +
Preference number: 5 (lower is better)
Translates to: SYRHWGFLSDHTMAKSTVFPIRS*NMIKVS
Trigger: GGAAACTTTTATCATGTTCAAGGACCTGATTGGAAA...GACTGTGGATTTCGCCATTGTATGATCAGAAAGAAATCCCCAGTGTCTGTAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CAA 90 bp AATCTGCATACTCATTTCTTAAGTAACGCCCTGGACACATCTGAGAGCTTTTGCTTTTTAACAATTTTGTaGCGCTTGGCTTGTGAGAAG +
Preference number: 5 (lower is better)
Translates to: NLHTHFLSNALDTSESFCFLTIL*RLACEK
Trigger: CTTCTCACAAGCCAAGCGCAACAAAATTGTTAAAAA...GCAAAAGCTCTCAGATGTGTCCAGGGCGTTACTTAAGAAATGAGTATGCAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp TCTCAAAGCCTGCTTTATATCTTGTTCTACATTAGGAAATTGCAGTGTGGCTGCCCATTTCCACTGAAATaGAACTCACACTGCATCATA +
Preference number: 5 (lower is better)
Translates to: SQSLLYILFYIRKLQCGCPFPLK*NSHCII
Trigger: TATGATGCAGTGTGAGTTCAATTTCAGTGGAAATGG...GCAGCCACACTGCAATTTCCTAATGTAGAACAAGATATAAAGCAGGCTTTGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp ATGCAAGACTTATATGCAGAAAACTTTCACACGCCATTGAAGGGCACAAAAGCACCATTTCCACTGAAATaGAACTCACACTGCATCATA +
Preference number: 5 (lower is better)
Translates to: MQDLYAENFHTPLKGTKAPFPLK*NSHCII
Trigger: TATGATGCAGTGTGAGTTCAATTTCAGTGGAAATGG...TGCTTTTGTGCCCTTCAATGGCGTGTGAAAGTTTTCTGCATATAAGTCTTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CAA 90 bp TCTCAAAGCCTGCTTTATATCTTGTTCTACATTAGGAAATTGCAGTGTGGCTGCATGTGCAGAACTAACTaGCACTCACATTCCAAACTA +
Preference number: 5 (lower is better)
Translates to: SQSLLYILFYIRKLQCGCMCRTN*HSHSKL
Trigger: TAGTTTGGAATGTGAGTGCAAGTTAGTTCTGCACAT...GCAGCCACACTGCAATTTCCTAATGTAGAACAAGATATAAAGCAGGCTTTGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp TCTCAAAGCCTGCTTTATATCTTGTTCTACATTAGGAAATTGCAGTGTGGCTGCTTAAAATGCTGGAACTaGATGTCTCCTATCAGTGAA +
Preference number: 5 (lower is better)
Translates to: SQSLLYILFYIRKLQCGCLKCWN*MSPISE
Trigger: TTCACTGATAGGAGACATCAAGTTCCAGCATTTTAA...GCAGCCACACTGCAATTTCCTAATGTAGAACAAGATATAAAGCAGGCTTTGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp CCTGTTACCGCCTTGTTCAGTTTGAGCTGCATATTGGCCAATCAAAGTTTATATTTTTTAACAATTTTGTaGCGCTTGGCTTGTGAGAAG +
Preference number: 5 (lower is better)
Translates to: PVTALFSLSCILANQSLYFLTIL*RLACEK
Trigger: CTTCTCACAAGCCAAGCGCAACAAAATTGTTAAAAA...ATATAAACTTTGATTGGCCAATATGCAGCTCAAACTGAACAAGGCGGTAACAGG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CAA 90 bp TCTCTAGTCATAAATAATCATGTAAAAGACCTCAAAGGAAACCACCATTTGGAGTACATATCCTGTCTGTaGCCTCCTCCTTTCTCTACA +
Preference number: 5 (lower is better)
Translates to: SLVINNHVKDLKGNHHLEYISCL*PPPFST
Trigger: TGTAGAGAAAGGAGGAGGCAACAGACAGGATATGTA...CTCCAAATGGTGGTTTCCTTTGAGGTCTTTTACATGATTATTTATGACTAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp TCTCAAAGCCTGCTTTATATCTTGTTCTACATTAGGAAATTGCAGTGTGGCTGCTTTTGTAGATTAGAATaGATGGTCCAACTCTCAACC +
Preference number: 5 (lower is better)
Translates to: SQSLLYILFYIRKLQCGCFCRLE*MVQLST
Trigger: GGTTGAGAGTTGGACCATCAATTCTAATCTACAAAA...GCAGCCACACTGCAATTTCCTAATGTAGAACAAGATATAAAGCAGGCTTTGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS TCA 90 bp CCCAGAGAGTATACAAACTGGCCTCATTGTTCTAGTAGTGACATATaGAGGCTTCATAGACCATATGATTTTACATTCTACTGCTTAGAA +
Preference number: 5 (lower is better)
Translates to: PREYTNWPHCSSSDI*RLHRPYDFTFYCLE
Trigger: TTCTAAGCAGTAGAATGTAAAATCATATGGTCTATGAAGCCTTCATATGTCACTACTAGAACAATGAGGCCAGTTTGTATACTCTCTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495236.1
CDS-3UTR CAA 90 bp AAAAGAGAGAAATTGAAGATGACTATGAGGTTGCCTGAGCAACTAAATGGATGGTGTGATTCACTTCCTTaGCTGCAATCACTTTATTCA +
Preference number: 5 (lower is better)
Translates to: KREKLKMTMRLPEQLNGWCDSLP*LQSLYS
Trigger: TGAATAAAGTGATTGCAGCAAAGGAAGTGAATCACA...CCATCCATTTAGTTGCTCAGGCAACCTCATAGTCATCTTCAATTTCTCTCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CAA 90 bp AAAAGAGAGAAATTGAAGATGACTATGAGGTTGCCTGAGCAACTAAATGGATGGTTAAAATGCTGGAACTaGATGTCTCCTATCAGTGAA +
Preference number: 5 (lower is better)
Translates to: KREKLKMTMRLPEQLNGWLKCWN*MSPISE
Trigger: TTCACTGATAGGAGACATCAAGTTCCAGCATTTTAA...CCATCCATTTAGTTGCTCAGGCAACCTCATAGTCATCTTCAATTTCTCTCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS-3UTR CAA 90 bp GACACATTATTTATGAATTCTGTCAAATGTGACTCTTCCTACCCAACACCTTCCTTTCCAATCAGGTCCTaGAACATGATAAAAGTTTCC +
Preference number: 5 (lower is better)
Translates to: DTLFMNSVKCDSSYPTPSFPIRS*NMIKVS
Trigger: GGAAACTTTTATCATGTTCAAGGACCTGATTGGAAA...GGAAGGTGTTGGGTAGGAAGAGTCACATTTGACAGAATTCATAAATAATGTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp ATGAGAAAGGAAGCCACAAATTTGAAGGGCCTTATAAATACCTTTCACAAAATGGTAAACAAAGGTAGGTaGTTGTCTCAAAGCCTGCTT +
Preference number: 5 (lower is better)
Translates to: MRKEATNLKGLINTFHKMVNKGR*LSQSLL
Trigger: AAGCAGGCTTTGAGACAACAACCTACCTTTGTTTAC...CATTTTGTGAAAGGTATTTATAAGGCCCTTCAAATTTGTGGCTTCCTTTCTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS-3UTR CAA 90 bp ATGAGAAAGGAAGCCACAAATTTGAAGGGCCTTATAAATACCTTTCACAAAATGCCATATTTCATCTCATaGAAACCTCACAACAACCGA +
Preference number: 5 (lower is better)
Translates to: MRKEATNLKGLINTFHKMPYFIS*KPHNNR
Trigger: TCGGTTGTTGTGAGGTTTCAATGAGATGAAATATGG...CATTTTGTGAAAGGTATTTATAAGGCCCTTCAAATTTGTGGCTTCCTTTCTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS CCA 72 bp CCTTCCTTCAGCTCCATATGGCCCACGCGGACAATCTaGCACACAAGGCTGACGCGGGGCCGGATGAGGTCC +
Preference number: 6 (lower is better)
Translates to: PSFSSIWPTRTI*HTRLTRGRMRS
Trigger: GGACCTCATCCGGCCCCGCGTCAGCCTTGTGTGCCAGATTGTCCGCGTGGGCCATATGGAGCTGAAGGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276440.12
ENST00000444569.5
ENST00000481100.5
CDS CCA 72 bp TGTAGTTATAGATCGCAACCCCGTACTTCTGCCTCTTaGTCGGGATCCAGCGGGCCATGGCGGCGACCTCGC +
Preference number: 6 (lower is better)
Translates to: CSYRSQPRTSAS*SGSSGPWRRPR
Trigger: GCGAGGTCGCCGCCATGGCCCGCTGGATCCCGACCAAGAGGCAGAAGTACGGGGTTGCGATCTATAACTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276440.12
ENST00000410074.5
ENST00000481100.5
CDS CAA 72 bp CAGGATTTCTGGGCCATGCCGCGCACCTCCAAGAGCTaGCCCTCCTCATCGTGCACAGACATCGTCACCTCC +
Preference number: 6 (lower is better)
Translates to: QDFWAMPRTSKS*PSSSCTDIVTS
Trigger: GGAGGTGACGATGTCTGTGCACGATGAGGAGGGCAAGCTCTTGGAGGTGCGCGGCATGGCCCAGAAATCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487948.1
CDS GCA 72 bp ATGACAGCCCATTCTCGCAGAGTGGACGTGAGCTCCTaGACCAGGGGGAGCTCGCCAGGAATCACGGTTTCA +
Preference number: 6 (lower is better)
Translates to: MTAHSRRVDVSS*TRGSSPGITVS
Trigger: TGAAACCGTGATTCCTGGCGAGCTCCCCCTGGTGCAGGAGCTCACGTCCACTCTGCGAGAATGGGCTGTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000481100.5
CDS GCA 72 bp AGGATTTCTGGGCCATGCCGCGCACCTCCAAGAGCTTaGCCTCCTCATCGTGCACAGACATCGTCACCTCCA +
Preference number: 6 (lower is better)
Translates to: RISGPCRAPPRA*PPHRAQTSSPP
Trigger: TGGAGGTGACGATGTCTGTGCACGATGAGGAGGGCAAGCTCTTGGAGGTGCGCGGCATGGCCCAGAAATCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487948.1
CDS GCA 72 bp AAAGACGGATGCGATGGTAGCAGGATTTCTGGGCCATaGCGCGCACCTCCAAGAGCTTGCCCTCCTCATCGT +
Preference number: 6 (lower is better)
Translates to: KDGCDGSRISGP*RAPPRACPPHR
Trigger: ACGATGAGGAGGGCAAGCTCTTGGAGGTGCGCGGCATGGCCCAGAAATCCTGCTACCATCGCATCCGTCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487948.1
CDS CCA 72 bp CCACAGGTGTGCTTCTTGCCTTCCTTCAGCTCCATATaGCCCACGCGGACAATCTGGCACACAAGGCTGACG +
Preference number: 6 (lower is better)
Translates to: PQVCFLPSFSSI*PTRTIWHTRLT
Trigger: CGTCAGCCTTGTGTGCCAGATTGTCCGCGTGGGCCATATGGAGCTGAAGGAAGGCAAGAAGCACACCTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276440.12
ENST00000444569.5
ENST00000481100.5
CDS GCA 72 bp GGAGGTGGGACAGGAGTGGCCGCGATTCCATCTGTCTaGAACGATGGGGAGCCTAGAAATGACAGAAAGTGC +
Preference number: 6 (lower is better)
Translates to: GGGTGVAAIPSV*NDGEPRNDRKC
Trigger: GCACTTTCTGTCATTTCTAGGCTCCCCATCGTTGCAGACAGATGGAATCGCGGCCACTCCTGTCCCACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479547.2
ENST00000521405.1
CDS TCA 72 bp CGGTTGATCCTTCTCAGCAGCCGTTCCATTATAAGCTaGATGTGCACCGCAGTGGCACCCTGCAGGGAACAC +
Preference number: 6 (lower is better)
Translates to: RLILLSSRSIIS*MCTAVAPCREH
Trigger: GTGTTCCCTGCAGGGTGCCACTGCGGTGCACATTCAGCTTATAATGGAACGGCTGCTGAGAAGGATCAACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481728.2
CDS GCA 72 bp CTCCAAAAGGTCTTCGGAGTCCACAGGTGTGCTTCTTaGCTTCCTTCAGCTCCATATGGCCCACGCGGACAA +
Preference number: 6 (lower is better)
Translates to: LQKVFGVHRCAS*LPSAPYGPRGQ
Trigger: TTGTCCGCGTGGGCCATATGGAGCTGAAGGAAGGCAAGAAGCACACCTGTGGACTCCGAAGACCTTTTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276440.12
ENST00000444569.5
ENST00000481100.5
CDS GCA 72 bp ACTGCCACTCCAAAAGGTCTTCGGAGTCCACAGGTGTaGTTCTTGCCTTCCTTCAGCTCCATATGGCCCACG +
Preference number: 6 (lower is better)
Translates to: TATPKGLRSPQV*FLPSFSSIWPT
Trigger: CGTGGGCCATATGGAGCTGAAGGAAGGCAAGAAGCACACCTGTGGACTCCGAAGACCTTTTGGAGTGGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276440.12
ENST00000444569.5
ENST00000481100.5
CDS CAA 72 bp ACTCCAAAAGGTCTTCGGAGTCCACAGGTGTGCTTCTaGCCTTCCTTCAGCTCCATATGGCCCACGCGGACA +
Preference number: 6 (lower is better)
Translates to: TPKGLRSPQVCF*PSFSSIWPTRT
Trigger: TGTCCGCGTGGGCCATATGGAGCTGAAGGAAGGCAAGAAGCACACCTGTGGACTCCGAAGACCTTTTGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276440.12
ENST00000444569.5
ENST00000481100.5
CDS TCA 72 bp TTTCCTCAATCCTTTTGGAGGCCACCTCATGGGCCTTaGAGAGGGCAATGGTGCTGGTTTCGTCAGGGTCTA +
Preference number: 6 (lower is better)
Translates to: FPQSFWRPPHGP*RGQWCWFRQGL
Trigger: TAGACCCTGACGAAACCAGCACCATTGCCCTCTTCAAGGCCCATGAGGTGGCCTCCAAAAGGATTGAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000481100.5
CDS TCA 72 bp AGGACACTGTACTCCACCCTGTTGAAACAAGCTCTCTaGGCCATTCACCTGCAGAAGCTCAGCGTGCAAGAG +
Preference number: 6 (lower is better)
Translates to: RTLYSTLLKQAL*AIHLQKLSVQE
Trigger: CTCTTGCACGCTGAGCTTCTGCAGGTGAATGGCTCAGAGAGCTTGTTTCAACAGGGTGGAGTACAGTGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS CAA 72 bp TTTTCCTCAATCCTTTTGGAGGCCACCTCATGGGCCTaGAAGAGGGCAATGGTGCTGGTTTCGTCAGGGTCT +
Preference number: 6 (lower is better)
Translates to: FSSILLEATSWA*KRAMVLVSSGS
Trigger: AGACCCTGACGAAACCAGCACCATTGCCCTCTTCAAGGCCCATGAGGTGGCCTCCAAAAGGATTGAGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000481100.5
CDS CAA 90 bp AAGAGGGCAATGGTGCTGGTTTCGTCAGGGTCTAGGATGTTCCCATaGTCATCTCGCACCACCAGATCTAACCCCAGCATTCTGTTCCCA +
Preference number: 6 (lower is better)
Translates to: KRAMVLVSSGSRMFP*SSRTTRSNPSILFP
Trigger: TGGGAACAGAATGCTGGGGTTAGATCTGGTGGTGCGAGATGACAATGGGAACATCCTAGACCCTGACGAAACCAGCACCATTGCCCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000481100.5
CDS CAA 90 bp TCTTGGATCTTTTCCTCAATCCTTTTGGAGGCCACCTCATGGGCCTaGAAGAGGGCAATGGTGCTGGTTTCGTCAGGGTCTAGGATGTTC +
Preference number: 6 (lower is better)
Translates to: SWIFSSILLEATSWA*KRAMVLVSSGSRMF
Trigger: GAACATCCTAGACCCTGACGAAACCAGCACCATTGCCCTCTTCAAGGCCCATGAGGTGGCCTCCAAAAGGATTGAGGAAAAGATCCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000481100.5
CDS TCA 72 bp TATCCTCTGTACCAACCCTCGTACATCTCCAGGATGTaGACTGTGTCACCGATCTGCAAGGAGAGCTCCACA +
Preference number: 6 (lower is better)
Translates to: YPLYQPSYISRM*TVSPICKESST
Trigger: TGTGGAGCTCTCCTTGCAGATCGGTGACACAGTTCACATCCTGGAGATGTACGAGGGTTGGTACAGAGGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276440.12
ENST00000410074.5
ENST00000481100.5
CDS TCA 72 bp AGAACGAAGAAGACTTCTTACCCCACATCACACAGGTaGCGCCCTCGCCAGAAGTTTCAAGAGCTCCACAAG +
Preference number: 6 (lower is better)
Translates to: RTKKTSYPTSHR*RPRQKFQELHK
Trigger: CTTGTGGAGCTCTTGAAACTTCTGGCGAGGGCGTCACCTGTGTGATGTGGGGTAAGAAGTCTTCTTCGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521405.1
CDS CAA 72 bp ATGGTGCTGGTTTCGTCAGGGTCTAGGATGTTCCCATaGTCATCTCGCACCACCAGATCTAACCCCAGCATT +
Preference number: 6 (lower is better)
Translates to: MVLVSSGSRMFP*SSRTTRSNPSI
Trigger: AATGCTGGGGTTAGATCTGGTGGTGCGAGATGACAATGGGAACATCCTAGACCCTGACGAAACCAGCACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000481100.5
CDS CAA 90 bp CAGGATGTGAACTGTGTCACCGATCTGCAAGGAGAGCTCCACATCTaGAGAAGCATTGTAGTTATAGATCGCAACCCCGTACTTCTGCCT +
Preference number: 6 (lower is better)
Translates to: QDVNCVTDLQGELHI*RSIVVIDRNPVLLP
Trigger: AGGCAGAAGTACGGGGTTGCGATCTATAACTACAATGCTTCTCAAGATGTGGAGCTCTCCTTGCAGATCGGTGACACAGTTCACATCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276440.12
ENST00000410074.5
ENST00000481100.5
CDS TCA 72 bp GCTGTTGATCTATCAACCAAGTGTGAAAAATTCTTCTaGACCTGGGTGAGGTCACCGGGCAAGAGCTTCAAG +
Preference number: 6 (lower is better)
Translates to: AVDLSTKCEKFF*TWVRSPGKSFK
Trigger: CTTGAAGCTCTTGCCCGGTGACCTCACCCAGGTTCAGAAGAATTTTTCACACTTGGTTGATAGATCAACAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276440.12
ENST00000444569.5
ENST00000478099.1
CDS TCA 72 bp GAATTTAGTCTGAAAGGACACTGTACTCCACCCTGTTaGAACAAGCTCTCTGAGCCATTCACCTGCAGAAGC +
Preference number: 6 (lower is better)
Translates to: EFSLKGHCTPPC*NKLSEPFTCRS
Trigger: GCTTCTGCAGGTGAATGGCTCAGAGAGCTTGTTTCAACAGGGTGGAGTACAGTGTCCTTTCAGACTAAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444569.5
CDS GCA 72 bp CGCAGCAAAAAGCAGTTCAGTCTTGCTGGAGTCATCTaGATTAGCCACATAGAAGTTCAGTACCTTGGAGAG +
Preference number: 6 (lower is better)
Translates to: RSKKQFSLAGVI*ISHIEVQYLGE
Trigger: CTCTCCAAGGTACTGAACTTCTATGTGGCTAATGCAGATGACTCCAGCAAGACTGAACTGCTTTTTGCTGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000444569.5
CDS GCA 72 bp TCAAGGCTTTCAACGCAGCAAAAAGCAGTTCAGTCTTaGTGGAGTCATACATATGCCAAAGTGGCGCTGAAG +
Preference number: 6 (lower is better)
Translates to: SRLSTQQKAVQS*WSHTYAKVALK
Trigger: CTTCAGCGCCACTTTGGCATATGTATGACTCCAGCAAGACTGAACTGCTTTTTGCTGCGTTGAAAGCCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS CCA 72 bp GGCAATCTGAAAGCTGTCTTTAGTGCTATCCTTGCTTaGGGTGAAGGTGACCAGGTTTTTGGATGCTTGAAG +
Preference number: 6 (lower is better)
Translates to: GNLKAVFSAILA*GEGDQVFGCLK
Trigger: CTTCAAGCATCCAAAAACCTGGTCACCTTCACCCCAAGCAAGGATAGCACTAAAGACAGCTTTCAGATTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276440.12
ENST00000444569.5
ENST00000467709.6
CDS CAA 72 bp AACTGTGTCACCGATCTGCAAGGAGAGCTCCACATCTaGAGAAGCATTGTAGTTATAGATCGCAACCCCGTA +
Preference number: 6 (lower is better)
Translates to: NCVTDLQGELHI*RSIVVIDRNPV
Trigger: TACGGGGTTGCGATCTATAACTACAATGCTTCTCAAGATGTGGAGCTCTCCTTGCAGATCGGTGACACAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276440.12
ENST00000410074.5
ENST00000481100.5
CDS TCA 72 bp AGTCCTCTCGCCTCTCATACTCCTTTCCCCGATAGATaGAGATTTTATTCCGTAGGAAAGAAGGAAAGCCCT +
Preference number: 6 (lower is better)
Translates to: SPLASHTPFPDR*RFYSVGKKESP
Trigger: AGGGCTTTCCTTCTTTCCTACGGAATAAAATCTTCATCTATCGGGGAAAGGAGTATGAGAGGCGAGAGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276440.12
CDS CCA 72 bp ATGAGGTCCATGCTGCTAAGGTCTGTAAACACTGCTTaGAGGTTATTGAGCTTCTCTATTTCCTTGGGCATC +
Preference number: 6 (lower is better)
Translates to: MRSMLLRSVNTA*RLLSFSISLGI
Trigger: GATGCCCAAGGAAATAGAGAAGCTCAATAACCTCCAAGCAGTGTTTACAGACCTTAGCAGCATGGACCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000481100.5
CDS CAA 72 bp GATGAGGTCCATGCTGCTAAGGTCTGTAAACACTGCTaGGAGGTTATTGAGCTTCTCTATTTCCTTGGGCAT +
Preference number: 6 (lower is better)
Translates to: DEVHAAKVCKHC*EVIELLYFLGH
Trigger: ATGCCCAAGGAAATAGAGAAGCTCAATAACCTCCAAGCAGTGTTTACAGACCTTAGCAGCATGGACCTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000481100.5
CDS CAA 72 bp TTCAAGGCTTTCAACGCAGCAAAAAGCAGTTCAGTCTaGCTGGAGTCATACATATGCCAAAGTGGCGCTGAA +
Preference number: 6 (lower is better)
Translates to: FKAFNAAKSSSV*LESYICQSGAE
Trigger: TTCAGCGCCACTTTGGCATATGTATGACTCCAGCAAGACTGAACTGCTTTTTGCTGCGTTGAAAGCCTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467709.6
CDS TCA 72 bp AGTGCCTTCTTAATAACTCAGATTGCTCAGGTTCACTaGGAGCTCACTGTGGCCACTGACTCAACAAATAGT +
Preference number: 6 (lower is better)
Translates to: SAFLITQIAQVH*ELTVATDSTNS
Trigger: ACTATTTGTTGAGTCAGTGGCCACAGTGAGCTCTCAGTGAACCTGAGCAATCTGAGTTATTAAGAAGGCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481728.2
CDS TCA 72 bp GTACCTTGGAGAGTTTCACATATGCCAAAGTGGCGCTaGAGTGCTTGTAAATGTAGGTTTCAAGTACAGGAT +
Preference number: 6 (lower is better)
Translates to: VPWRVSHMPKWR*SACKCRFQVQD
Trigger: ATCCTGTACTTGAAACCTACATTTACAAGCACTTCAGCGCCACTTTGGCATATGTGAAACTCTCCAAGGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276440.12
ENST00000444569.5
CDS CCA 72 bp TACTATGCCATTTTATATCAGAGACTTGAGCATCCATaGATTTCGGTATTGTGGGGGTCCTGGAACCAATTG +
Preference number: 6 (lower is better)
Translates to: YYAILYQRLEHP*ISVLWGSWNQL
Trigger: CAATTGGTTCCAGGACCCCCACAATACCGAAATCCATGGATGCTCAAGTCTCTGATATAAAATGGCATAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410074.5
CDS CAA 90 bp TCCACTTCCATTAACTTCTTTAGGTTGTGTTTAATGTTCTGGGAGTaGGAACGCCAATTTAACAAGCCTAACAGGTCAACATTCTGGGTG +
Preference number: 6 (lower is better)
Translates to: STSINFFRLCLMFWE*ERQFNKPNRSTFWV
Trigger: CACCCAGAATGTTGACCTGTTAGGCTTGTTAAATTGGCGTTCCAACTCCCAGAACATTAAACACAACCTAAAGAAGTTAATGGAAGTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276440.12
ENST00000444569.5
ENST00000467709.6
CDS GCA 72 bp GGAAAACCGCCTCTTTTTAATACAAATATTTGCTACTaGACAATGACAGGTTTCCCAAATACCTCCATTGGA +
Preference number: 6 (lower is better)
Translates to: GKPPLFNTNICY*TMTGFPNTSIG
Trigger: TCCAATGGAGGTATTTGGGAAACCTGTCATTGTGCAGTAGCAAATATTTGTATTAAAAAGAGGCGGTTTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479547.2
CDS CCA 72 bp ACTTCCATTAACTTCTTTAGGTTGTGTTTAATGTTCTaGGAGTTGGAACGCCAATTTAACAAGCCTAACAGG +
Preference number: 6 (lower is better)
Translates to: TSINFFRLCLMF*ELERQFNKPNR
Trigger: CCTGTTAGGCTTGTTAAATTGGCGTTCCAACTCCCAGAACATTAAACACAACCTAAAGAAGTTAATGGAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276440.12
ENST00000444569.5
ENST00000467709.6
CDS CAA 72 bp ATTAACTTCTTTAGGTTGTGTTTAATGTTCTGGGAGTaGGAACGCCAATTTAACAAGCCTAACAGGTCAACA +
Preference number: 6 (lower is better)
Translates to: INFFRLCLMFWE*ERQFNKPNRST
Trigger: TGTTGACCTGTTAGGCTTGTTAAATTGGCGTTCCAACTCCCAGAACATTAAACACAACCTAAAGAAGTTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276440.12
ENST00000444569.5
ENST00000467709.6
CDS TCA 72 bp TATACAAACTGGCCTCATTGTTCTAGTAGTGACATATaGAGGCTTCATAGACCATATGATTTTACATTCTAC +
Preference number: 6 (lower is better)
Translates to: YTNWPHCSSSDI*RLHRPYDFTFY
Trigger: GTAGAATGTAAAATCATATGGTCTATGAAGCCTTCATATGTCACTACTAGAACAATGAGGCCAGTTTGTATA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495236.1