RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DOCK10 (Homo sapiens)

Ensembl gene IDs: ENSG00000135905

Ensembl transcript IDs: ENST00000258390.12, ENST00000409592.7, ENST00000435582.1, ENST00000458608.1, ENST00000472652.1, ENST00000489831.1, ENST00000492251.1, ENST00000492369.5, ENST00000644695.1, ENST00000645028.1

Found 1047 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCGAATCCAGACCCAGATCAGTGAGCTCTGTGCTCCTCCTCCCTTaGAGGGGCCCCTCAGGACTGATTTGCAGAATGCGGTTGAGGGTG +
Preference number: 1 (lower is better)
Translates to: SESRPRSVSSVLLLP*RGPSGLICRMRLRV
Trigger: CACCCTCAACCGCATTCTGCAAATCAGTCCTGAGGGGCCCCTCCAAGGGAGGAGGAGCACAGAGCTCACTGATCTGGGTCTGGATTCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CCA 90 bp GTGGGTAGGGCCGGAGTTGCTTTGCTAATTACTCGAGTGCAGGTTTaGTCCACTCCGCGCTTTGACAGGTCGTCCCTGCCCGTAATCACT +
Preference number: 1 (lower is better)
Translates to: VGRAGVALLITRVQV*STPRFDRSSLPVIT
Trigger: AGTGATTACGGGCAGGGACGACCTGTCAAAGCGCGGAGTGGACCAAACCTGCACTCGAGTAATTAGCAAAGCAACTCCGGCCCTACCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CCA 90 bp TGGAGGGGCCCCTCAGGACTGATTTGCAGAATGCGGTTGAGGGTGTaGATCCATTCATCCATATCTGACTCTGTTTCAGCTGCCAGCACA +
Preference number: 1 (lower is better)
Translates to: WRGPSGLICRMRLRV*IHSSISDSVSAAST
Trigger: TGTGCTGGCAGCTGAAACAGAGTCAGATATGGATGAATGGATCCACACCCTCAACCGCATTCTGCAAATCAGTCCTGAGGGGCCCCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CCA 90 bp ATTTTGAAGACAAACGTCCAAGATGCTGAAGAAGTCGGACACCTCTaGGCTGGGAGCTCTCTGCCAGTAGGCAATCAGAGTCTCGTACGA +
Preference number: 1 (lower is better)
Translates to: ILKTNVQDAEEVGHL*AGSSLPVGNQSLVR
Trigger: TCGTACGAGACTCTGATTGCCTACTGGCAGAGAGCTCCCAGCCCAGAGGTGTCCGACTTCTTCAGCATCTTGGACGTTTGTCTTCAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CCA 90 bp AACACATGGCAGCCTCAGATAAATCTCCGTTTCTGGCATGAATCTTaGCCATACTTTCCAGCCAGGTCCTGCGTAGTTCAGGAGTGCTTG +
Preference number: 1 (lower is better)
Translates to: NTWQPQINLRFWHES*PYFPARSCVVQECL
Trigger: CAAGCACTCCTGAACTACGCAGGACCTGGCTGGAAAGTATGGCCAAGATTCATGCCAGAAACGGAGATTTATCTGAGGCTGCCATGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CCA 90 bp CCCGACAGCGTGAAGGGTGTCTCGAAGACAAAGCGGTTGATGTTGTaGTGCATTTCGAAATCTGTCTTCCGGTCTTCGATTTCCTTTTCC +
Preference number: 1 (lower is better)
Translates to: PDSVKGVSKTKRLML*CISKSVFRSSISFS
Trigger: GGAAAAGGAAATCGAAGACCGGAAGACAGATTTCGAAATGCACCACAACATCAACCGCTTTGTCTTCGAGACACCCTTCACGCTGTCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR GCA 90 bp GATACAGGTCCTTCAGATAAATCCTTGGCATATTGTCCAGGAGCATaGCGTACAGGGGCATGTATAAACTTGCTATCTGGGCCTGCTTTC +
Preference number: 1 (lower is better)
Translates to: DTGPSDKSLAYCPGA*RTGACINLLSGPAF
Trigger: GAAAGCAGGCCCAGATAGCAAGTTTATACATGCCCCTGTACGGCATGCTCCTGGACAATATGCCAAGGATTTATCTGAAGGACCTGTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR GCA 90 bp GACAGCGTGAAGGGTGTCTCGAAGACAAAGCGGTTGATGTTGTGGTaGATTTCGAAATCTGTCTTCCGGTCTTCGATTTCCTTTTCCTCA +
Preference number: 1 (lower is better)
Translates to: DSVKGVSKTKRLMLW*ISKSVFRSSISFSS
Trigger: TGAGGAAAAGGAAATCGAAGACCGGAAGACAGATTTCGAAATGCACCACAACATCAACCGCTTTGTCTTCGAGACACCCTTCACGCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR GCA 90 bp GTTGTCAGGGTACTTCTTTGCATTGGTTTCTTCAAGAAAAGCTCGTaGATAGGCCATTGGCCCAGCATTAACCTTCACGCTGACACTTCC +
Preference number: 1 (lower is better)
Translates to: VVRVLLCIGFFKKSS*IGHWPSINLHADTS
Trigger: GGAAGTGTCAGCGTGAAGGTTAATGCTGGGCCAATGGCCTATGCACGAGCTTTTCTTGAAGAAACCAATGCAAAGAAGTACCCTGACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR TCA 90 bp GCCTGCTTTGGAAATTTTAGCCATTCCTCTGGAAGTCCCTTGATGTaGGGTTCTTCTGATTGTCTTGGAGTGATGGTGTCGATGTTGCCA +
Preference number: 1 (lower is better)
Translates to: ACFGNFSHSSGSPLM*GSSDCLGVMVSMLP
Trigger: TGGCAACATCGACACCATCACTCCAAGACAATCAGAAGAACCTCACATCAAGGGACTTCCAGAGGAATGGCTAAAATTTCCAAAGCAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR TCA 90 bp TACAAACAGTCTCAAGGAGGCAAACACATGCTTCAGCGCTGTGGCTaGCTGATTGACTTGGAAAAAGAGCATGTAGGTATCAAAGACCCT +
Preference number: 1 (lower is better)
Translates to: YKQSQGGKHMLQRCG*LIDLEKEHVGIKDP
Trigger: AGGGTCTTTGATACCTACATGCTCTTTTTCCAAGTCAATCAGTCAGCCACAGCGCTGAAGCATGTGTTTGCCTCCTTGAGACTGTTTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR TCA 90 bp TGCTTATCTCCATTGGCGAAATTATTGGTAATTGCAAGCGAATGTTaGAACCGAGAGCCTCCAATCCCAGCATCGGCTATTAACTGGCTC +
Preference number: 1 (lower is better)
Translates to: CLSPLAKLLVIASEC*NREPPIPASAINWL
Trigger: GAGCCAGTTAATAGCCGATGCTGGGATTGGAGGCTCTCGGTTTCAACATTCGCTTGCAATTACCAATAATTTCGCCAATGGAGATAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CCA 90 bp GCTCCAAGGGAACGTTGTCAACAGCAATATCCAGGCTTCCAGGAATaGTCTGCATTTTGCTTATTCTGTCGGCCCTTCTATAATCTGATA +
Preference number: 1 (lower is better)
Translates to: APRERCQQQYPGFQE*SAFCLFCRPFYNLI
Trigger: TATCAGATTATAGAAGGGCCGACAGAATAAGCAAAATGCAGACCATTCCTGGAAGCCTGGATATTGCTGTTGACAACGTTCCCTTGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CCA 90 bp CACAGTTGTCCGTCTTCTCACTGCTCTTCTCATTGGTACTTGGATTaGAGTCAAGACTTGCTAAAGATGCTCTGGAGTCAGCATGGTTTA +
Preference number: 1 (lower is better)
Translates to: HSCPSSHCSSHWYLD*SQDLLKMLWSQHGL
Trigger: TAAACCATGCTGACTCCAGAGCATCTTTAGCAAGTCTTGACTCCAATCCAAGTACCAATGAGAAGAGCAGTGAGAAGACGGACAACTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR TCA 90 bp GATTTGCAGAATGCGGTTGAGGGTGTGGATCCATTCATCCATATCTaGCTCTGTTTCAGCTGCCAGCACAAAATAGGTCAGATCATTCAT +
Preference number: 1 (lower is better)
Translates to: DLQNAVEGVDPFIHI*LCFSCQHKIGQIIH
Trigger: ATGAATGATCTGACCTATTTTGTGCTGGCAGCTGAAACAGAGTCAGATATGGATGAATGGATCCACACCCTCAACCGCATTCTGCAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR TCA 90 bp ATAGTGAGGCAAACCTCCGTAGCTATATTGGCCTCAGTGTCTACATaGTGCACGATGTCTATTTCATTGGAGTTGCTGGTCATGGTATTG +
Preference number: 1 (lower is better)
Translates to: IVRQTSVAILASVST*CTMSISLELLVMVL
Trigger: CAATACCATGACCAGCAACTCCAATGAAATAGACATCGTGCATCATGTAGACACTGAGGCCAATATAGCTACGGAGGTTTGCCTCACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR GCA 90 bp AAGACAAGGGTCTTGGGATCTTTTCACAGTTGTCCGTCTTCTCACTaGTCTTCTCATTGGTACTTGGATTGGAGTCAAGACTTGCTAAAG +
Preference number: 1 (lower is better)
Translates to: KTRVLGSFHSCPSSH*SSHWYLDWSQDLLK
Trigger: CTTTAGCAAGTCTTGACTCCAATCCAAGTACCAATGAGAAGAGCAGTGAGAAGACGGACAACTGTGAAAAGATCCCAAGACCCTTGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CCA 90 bp TTGGGATCTTTTCACAGTTGTCCGTCTTCTCACTGCTCTTCTCATTaGTACTTGGATTGGAGTCAAGACTTGCTAAAGATGCTCTGGAGT +
Preference number: 1 (lower is better)
Translates to: LGSFHSCPSSHCSSH*YLDWSQDLLKMLWS
Trigger: ACTCCAGAGCATCTTTAGCAAGTCTTGACTCCAATCCAAGTACCAATGAGAAGAGCAGTGAGAAGACGGACAACTGTGAAAAGATCCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CCA 90 bp TCTCCTTCAAAAGCTTTACTTGGTTGTCAGGGTACTTCTTTGCATTaGTTTCTTCAAGAAAAGCTCGTGCATAGGCCATTGGCCCAGCAT +
Preference number: 1 (lower is better)
Translates to: SPSKALLGCQGTSLH*FLQEKLVHRPLAQH
Trigger: ATGCTGGGCCAATGGCCTATGCACGAGCTTTTCTTGAAGAAACCAATGCAAAGAAGTACCCTGACAACCAAGTAAAGCTTTTGAAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CCA 90 bp GATGTCTGGCAGGAAGGATTGGATCCTTTGAGAGTTCCATTGTTCTaGGTGGACTGCACAAATTTAAATGCAGCAGCAATTTTTCTTATT +
Preference number: 1 (lower is better)
Translates to: DVWQEGLDPLRVPLF*VDCTNLNAAAIFLI
Trigger: AATAAGAAAAATTGCTGCTGCATTTAAATTTGTGCAGTCCACCCAGAACAATGGAACTCTCAAAGGATCCAATCCTTCCTGCCAGACATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR TCA 90 bp TCTTTTCCACTTTCCAGTAACCCTTTCTTTTCAGATACTCTGCAATaGGAGCAGCAATATGGATGTAACACATGGCAGCCTCAGATAAAT +
Preference number: 1 (lower is better)
Translates to: SFPLSSNPFFSDTLQ*EQQYGCNTWQPQIN
Trigger: ATTTATCTGAGGCTGCCATGTGTTACATCCATATTGCTGCTCTCATTGCAGAGTATCTGAAAAGAAAGGGTTACTGGAAAGTGGAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR GCA 90 bp CAGGAAGGATTGGATCCTTTGAGAGTTCCATTGTTCTGGGTGGACTaGACAAATTTAAATGCAGCAGCAATTTTTCTTATTATGTTGCGT +
Preference number: 1 (lower is better)
Translates to: QEGLDPLRVPLFWVD*TNLNAAAIFLIMLR
Trigger: ACGCAACATAATAAGAAAAATTGCTGCTGCATTTAAATTTGTGCAGTCCACCCAGAACAATGGAACTCTCAAAGGATCCAATCCTTCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CCA 90 bp TGTCTAAACAATGGTGAAAATCTTGAGTCTCTGTCCACATTTCCCTaGTTGTCCTTAAATACTGATCTTACTGCCCAAGCAAAAGGCATA +
Preference number: 1 (lower is better)
Translates to: CLNNGENLESLSTFP*LSLNTDLTAQAKGI
Trigger: TATGCCTTTTGCTTGGGCAGTAAGATCAGTATTTAAGGACAACCAGGGAAATGTGGACAGAGACTCAAGATTTTCACCATTGTTTAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR TCA 90 bp CAAGTGCATCCTTGTATTTCCAAATCACATGGTCGGATAGGACCATaGCAAGATTGTCCAATTCATTTTGGTAAGATTCAGGAAATCTCT +
Preference number: 1 (lower is better)
Translates to: QVHPCISKSHGRIGP*QDCPIHFGKIQEIS
Trigger: AGAGATTTCCTGAATCTTACCAAAATGAATTGGACAATCTTGTCATGGTCCTATCCGACCATGTGATTTGGAAATACAAGGATGCACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR GCA 90 bp CTCACAGCTTTGATGAGTTGTAAGTGGGACCGGACAATTGACTTCTaGTTGTTAAATTCAAAATTCTTCCTCATGAAAAAGTACAGAAGG +
Preference number: 1 (lower is better)
Translates to: LTALMSCKWDRTIDF*LLNSKFFLMKKYRR
Trigger: CCTTCTGTACTTTTTCATGAGGAAGAATTTTGAATTTAACAAGCAGAAGTCAATTGTCCGGTCCCACTTACAACTCATCAAAGCTGTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CAA 90 bp CAGCGAATCCAGACCCAGATCAGTGAGCTCTGTGCTCCTCCTCCCTaGGAGGGGCCCCTCAGGACTGATTTGCAGAATGCGGTTGAGGGT +
Preference number: 2 (lower is better)
Translates to: QRIQTQISELCAPPP*EGPLRTDLQNAVEG
Trigger: ACCCTCAACCGCATTCTGCAAATCAGTCCTGAGGGGCCCCTCCAAGGGAGGAGGAGCACAGAGCTCACTGATCTGGGTCTGGATTCGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CAA 90 bp TCTGTGGTTTCTGGGCTCCTCGGCGTGAAGGGTGCTGCAGGAAGTTaGAGGAAGGATTGTTTTGCTGTAACGTGTGGCCGCCCCAGCCTC +
Preference number: 2 (lower is better)
Translates to: SVVSGLLGVKGAAGS*RKDCFAVTCGRPSL
Trigger: GAGGCTGGGGCGGCCACACGTTACAGCAAAACAATCCTTCCTCAAACTTCCTGCAGCACCCTTCACGCCGAGGAGCCCAGAAACCACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458608.1
3UTR-3UTR CCA 90 bp CACCTCTGGGCTGGGAGCTCTCTGCCAGTAGGCAATCAGAGTCTCGTACGAAATTCCAGCTGCTCCTCATaGCACTTGGCCACAATGTCG +
Preference number: 2 (lower is better)
Translates to: HLWAGSSLPVGNQSLVRNSSCSS*HLATMS
Trigger: CGACATTGTGGCCAAGTGCCATGAGGAGCAGCTGGA...ATTTCGTACGAGACTCTGATTGCCTACTGGCAGAGAGCTCCCAGCCCAGAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CAA 90 bp TCAGCACTAGATGAGATGGAGACCGTGGGTAGGGCCGGAGTTGCTTaGCTAATTACTCGAGTGCAGGTTTGGTCCACTCCGCGCTTTGAC +
Preference number: 2 (lower is better)
Translates to: SALDEMETVGRAGVA*LITRVQVWSTPRFD
Trigger: GTCAAAGCGCGGAGTGGACCAAACCTGCACTCGAGTAATTAGCAAAGCAACTCCGGCCCTACCCACGGTCTCCATCTCATCTAGTGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CAA 90 bp CTCCTCCCTTGGAGGGGCCCCTCAGGACTGATTTGCAGAATGCGGTaGAGGGTGTGGATCCATTCATCCATATCTGACTCTGTTTCAGCT +
Preference number: 2 (lower is better)
Translates to: LLPWRGPSGLICRMR*RVWIHSSISDSVSA
Trigger: AGCTGAAACAGAGTCAGATATGGATGAATGGATCCACACCCTCAACCGCATTCTGCAAATCAGTCCTGAGGGGCCCCTCCAAGGGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR TCA 90 bp GTCAGGGTACTTCTTTGCATTGGTTTCTTCAAGAAAAGCTCGTGCATAGGCCATTGCTGTGTAGGCGGCTaGGGTGAAGAGGGGCCCTCC +
Preference number: 2 (lower is better)
Translates to: VRVLLCIGFFKKSSCIGHCCVGG*GEEGPS
Trigger: GGAGGGCCCCTCTTCACCTCAGCCGCCTACACAGCA...ATGGCCTATGCACGAGCTTTTCTTGAAGAAACCAATGCAAAGAAGTACCCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR TCA 90 bp CACCTCTGGGCTGGGAGCTCTCTGCCAGTAGGCAATCAGAGTCTCGTACGAAATCTCTTGAGTCGATTCTaGAGGTGTCAAAGGATCTGG +
Preference number: 2 (lower is better)
Translates to: HLWAGSSLPVGNQSLVRNLLSRF*RCQRIW
Trigger: CCAGATCCTTTGACACCTTCAGAATCGACTCAAGAG...ATTTCGTACGAGACTCTGATTGCCTACTGGCAGAGAGCTCCCAGCCCAGAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CAA 90 bp TGCTTCTTGCCCGACAGCGTGAAGGGTGTCTCGAAGACAAAGCGGTaGATGTTGTGGTGCATTTCGAAATCTGTCTTCCGGTCTTCGATT +
Preference number: 2 (lower is better)
Translates to: CFLPDSVKGVSKTKR*MLWCISKSVFRSSI
Trigger: AATCGAAGACCGGAAGACAGATTTCGAAATGCACCACAACATCAACCGCTTTGTCTTCGAGACACCCTTCACGCTGTCGGGCAAGAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR GCA 90 bp CACCTCTGGGCTGGGAGCTCTCTGCCAGTAGGCAATCAGAGTCTCGTACGAAATGTTACACAATTTGGATaGTCCAAGGGAACGTTGTCA +
Preference number: 2 (lower is better)
Translates to: HLWAGSSLPVGNQSLVRNVTQFG*SKGTLS
Trigger: TGACAACGTTCCCTTGGAGCATCCAAATTGTGTAAC...ATTTCGTACGAGACTCTGATTGCCTACTGGCAGAGAGCTCCCAGCCCAGAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR GCA 90 bp GCCAGTTCCTCATGTACAGTCCTCTCCTTGCATGCCCTGGTCTTGAACACGAACATGTCACTCCCACCATaGTTTCCACTTGCAGAATCT +
Preference number: 2 (lower is better)
Translates to: ASSSCTVLSLHALVLNTNMSLPP*FPLAES
Trigger: AGATTCTGCAAGTGGAAAGCATGGTGGGAGTGACAT...GTTCGTGTTCAAGACCAGGGCATGCAAGGAGAGGACTGTACATGAGGAACTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CCA 90 bp CACCTCTGGGCTGGGAGCTCTCTGCCAGTAGGCAATCAGAGTCTCGTACGAAATCGATGTTACACAATTTaGATGCTCCAAGGGAACGTT +
Preference number: 2 (lower is better)
Translates to: HLWAGSSLPVGNQSLVRNRCYTI*MLQGNV
Trigger: AACGTTCCCTTGGAGCATCCAAATTGTGTAACATCG...ATTTCGTACGAGACTCTGATTGCCTACTGGCAGAGAGCTCCCAGCCCAGAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CCA 90 bp CACCTCTGGGCTGGGAGCTCTCTGCCAGTAGGCAATCAGAGTCTCGTACGAAATTACACTTCAGGGGCTTaGCACTTTCTTCATCTGAAT +
Preference number: 2 (lower is better)
Translates to: HLWAGSSLPVGNQSLVRNYTSGA*HFLHLN
Trigger: ATTCAGATGAAGAAAGTGCCAAGCCCCTGAAGTGTA...ATTTCGTACGAGACTCTGATTGCCTACTGGCAGAGAGCTCCCAGCCCAGAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CCA 90 bp GTCCGTCTTCTCACTGCTCTTCTCATTGGTACTTGGATTGGAGTCAAGACTTGCGCTCCTCATGGCACTTaGCCACAATGTCGGTCAGAA +
Preference number: 2 (lower is better)
Translates to: VRLLTALLIGTWIGVKTCAPHGT*PQCRSE
Trigger: TTCTGACCGACATTGTGGCCAAGTGCCATGAGGAGC...GCAAGTCTTGACTCCAATCCAAGTACCAATGAGAAGAGCAGTGAGAAGACGGAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CAA 90 bp TTGCCCGACAGCGTGAAGGGTGTCTCGAAGACAAAGCGGTTGATGTaGTGGTGCATTTCGAAATCTGTCTTCCGGTCTTCGATTTCCTTT +
Preference number: 2 (lower is better)
Translates to: LPDSVKGVSKTKRLM*WCISKSVFRSSISF
Trigger: AAAGGAAATCGAAGACCGGAAGACAGATTTCGAAATGCACCACAACATCAACCGCTTTGTCTTCGAGACACCCTTCACGCTGTCGGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR GCA 90 bp GTCCGTCTTCTCACTGCTCTTCTCATTGGTACTTGGATTGGAGTCAAGACTTGCAGTCCTCTCCTTGCATaGCCTGGTCTTGAACACGAA +
Preference number: 2 (lower is better)
Translates to: VRLLTALLIGTWIGVKTCSPLLA*PGLEHE
Trigger: TTCGTGTTCAAGACCAGGGCATGCAAGGAGAGGACT...GCAAGTCTTGACTCCAATCCAAGTACCAATGAGAAGAGCAGTGAGAAGACGGAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CAA 90 bp TTGGCATATTGTCCAGGAGCATGCCGTACAGGGGCATGTATAAACTaGCTATCTGGGCCTGCTTTCTTGGCTCTCTGTATCGATCATCAA +
Preference number: 2 (lower is better)
Translates to: LAYCPGACRTGACIN*LSGPAFLALCIDHQ
Trigger: TTGATGATCGATACAGAGAGCCAAGAAAGCAGGCCCAGATAGCAAGTTTATACATGCCCCTGTACGGCATGCTCCTGGACAATATGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CAA 90 bp GAGTGCATCCATTGTGACAAGAGACCTGATGTCTGGCAGGAAGGATaGGATCCTTTGAGAGTTCCATTGTTCTGGGTGGACTGCACAAAT +
Preference number: 2 (lower is better)
Translates to: ECIHCDKRPDVWQEG*DPLRVPLFWVDCTN
Trigger: ATTTGTGCAGTCCACCCAGAACAATGGAACTCTCAAAGGATCCAATCCTTCCTGCCAGACATCAGGTCTCTTGTCACAATGGATGCACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR GCA 90 bp GCAGGAAGTTTGAGGAAGGATTGTTTTGCTGTAACGTGTGGCCGCCCCAGCCTCCAAACAGGCATTAATTaGTCAGTAATCTGTCACAAC +
Preference number: 2 (lower is better)
Translates to: AGSLRKDCFAVTCGRPSLQTGIN*SVICHN
Trigger: GTTGTGACAGATTACTGAGCAATTAATGCCTGTTTG...GAGGCTGGGGCGGCCACACGTTACAGCAAAACAATCCTTCCTCAAACTTCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458608.1
3UTR-3UTR GCA 90 bp GTCAGGGTACTTCTTTGCATTGGTTTCTTCAAGAAAAGCTCGTGCATAGGCCATAAGGAGGCAAACACATaGTTCAGCGCTGTGGCTGAC +
Preference number: 2 (lower is better)
Translates to: VRVLLCIGFFKKSSCIGHKEANT*FSAVAD
Trigger: GTCAGCCACAGCGCTGAAGCATGTGTTTGCCTCCTT...ATGGCCTATGCACGAGCTTTTCTTGAAGAAACCAATGCAAAGAAGTACCCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CCA 90 bp AGGAAGTTTGAGGAAGGATTGTTTTGCTGTAACGTGTGGCCGCCCCAGCCTCAGCAGCATCGTTTTAATTaGTATGTTCACCCCAGAGAA +
Preference number: 2 (lower is better)
Translates to: RKFEEGLFCCNVWPPQPQQHRFN*YVHPRE
Trigger: TTCTCTGGGGTGAACATACCAATTAAAACGATGCTG...CTGAGGCTGGGGCGGCCACACGTTACAGCAAAACAATCCTTCCTCAAACTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000458608.1
3UTR-3UTR TCA 90 bp TGTTTCCTCTGGCGTGCATTCACAAGTTACAGAATTATCCAGCGAATCCAGACCCCATTCATCCATATCTaGCTCTGTTTCAGCTGCCAG +
Preference number: 2 (lower is better)
Translates to: CFLWRAFTSYRIIQRIQTPFIHI*LCFSCQ
Trigger: CTGGCAGCTGAAACAGAGTCAGATATGGATGAATGG...GGTCTGGATTCGCTGGATAATTCTGTAACTTGTGAATGCACGCCAGAGGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR TCA 90 bp TCAGATAAATCCTTGGCATATTGTCCAGGAGCATGCCGTACAGGGGCATGTATACTGATTGTCTTGGAGTaGTGGTGTCGATGTTGCCAT +
Preference number: 2 (lower is better)
Translates to: SDKSLAYCPGACRTGACILIVLE*WCRCCH
Trigger: ATGGCAACATCGACACCATCACTCCAAGACAATCAG...TATACATGCCCCTGTACGGCATGCTCCTGGACAATATGCCAAGGATTTATCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR TCA 90 bp TCAGATAAATCCTTGGCATATTGTCCAGGAGCATGCCGTACAGGGGCATGTATACCTCTGGAAGTCCCTTaGTGTGAGGTTCTTCTGATT +
Preference number: 2 (lower is better)
Translates to: SDKSLAYCPGACRTGACIPLEVP*CEVLLI
Trigger: AATCAGAAGAACCTCACATCAAGGGACTTCCAGAGG...TATACATGCCCCTGTACGGCATGCTCCTGGACAATATGCCAAGGATTTATCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR GCA 90 bp GCACACAGTTATATTCCGTGCCTTGTTGAAGCATTTCTGGCTATCATACTTGAGCCCTCAGGACTGATTTaGAGAATGCGGTTGAGGGTG +
Preference number: 2 (lower is better)
Translates to: AHSYIPCLVEAFLAIILEPSGLI*RMRLRV
Trigger: CACCCTCAACCGCATTCTGCAAATCAGTCCTGAGGG...CTCAAGTATGATAGCCAGAAATGCTTCAACAAGGCACGGAATATAACTGTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CCA 90 bp CGCCCCAGCCTCAGTGAGGTTGCTTTCGCGGAAGCATCTAGCATGATGCTCAAATCTTTTAAGAAGTACTaGCTGCCAGTAGTTTTTCAT +
Preference number: 2 (lower is better)
Translates to: RPSLSEVAFAEASSMMLKSFKKY*LPVVFH
Trigger: ATGAAAAACTACTGGCAGCCAGTACTTCTTAAAAGA...TTTGAGCATCATGCTAGATGCTTCCGCGAAAGCAACCTCACTGAGGCTGGGGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458608.1
3UTR CAA 90 bp TCACAGTTGTCCGTCTTCTCACTGCTCTTCTCATTGGTACTTGGATaGGAGTCAAGACTTGCTAAAGATGCTCTGGAGTCAGCATGGTTT +
Preference number: 2 (lower is better)
Translates to: SQLSVFSLLFSLVLG*ESRLAKDALESAWF
Trigger: AAACCATGCTGACTCCAGAGCATCTTTAGCAAGTCTTGACTCCAATCCAAGTACCAATGAGAAGAGCAGTGAGAAGACGGACAACTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CAA 90 bp CTTGGGATCTTTTCACAGTTGTCCGTCTTCTCACTGCTCTTCTCATaGGTACTTGGATTGGAGTCAAGACTTGCTAAAGATGCTCTGGAG +
Preference number: 2 (lower is better)
Translates to: LGIFSQLSVFSLLFS*VLGLESRLAKDALE
Trigger: CTCCAGAGCATCTTTAGCAAGTCTTGACTCCAATCCAAGTACCAATGAGAAGAGCAGTGAGAAGACGGACAACTGTGAAAAGATCCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR TCA 90 bp TCAGATAAATCCTTGGCATATTGTCCAGGAGCATGCCGTACAGGGGCATGTATAGATGCATGTAACTCTTaGGTCGATTCTGAAGGTGTC +
Preference number: 2 (lower is better)
Translates to: SDKSLAYCPGACRTGACIDACNS*VDSEGV
Trigger: GACACCTTCAGAATCGACTCAAGAGTTACATGCATC...TATACATGCCCCTGTACGGCATGCTCCTGGACAATATGCCAAGGATTTATCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR GCA 90 bp GTCCGTCTTCTCACTGCTCTTCTCATTGGTACTTGGATTGGAGTCAAGACTTGCCTTCCAGGAATGGTCTaGATTTTGCTTATTCTGTCG +
Preference number: 2 (lower is better)
Translates to: VRLLTALLIGTWIGVKTCLPGMV*ILLILS
Trigger: CGACAGAATAAGCAAAATGCAGACCATTCCTGGAAG...GCAAGTCTTGACTCCAATCCAAGTACCAATGAGAAGAGCAGTGAGAAGACGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CCA 90 bp GTCCGTCTTCTCACTGCTCTTCTCATTGGTACTTGGATTGGAGTCAAGACTTGCAGAATCTGTTTCCTCTaGCGTGCATTCACAAGTTAC +
Preference number: 2 (lower is better)
Translates to: VRLLTALLIGTWIGVKTCRICFL*RAFTSY
Trigger: GTAACTTGTGAATGCACGCCAGAGGAAACAGATTCT...GCAAGTCTTGACTCCAATCCAAGTACCAATGAGAAGAGCAGTGAGAAGACGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CAA 90 bp AGACCAGTCACATTTTTAGCCAGTTCCTCATGTACAGTCCTCTCCTaGCATGCCCTGGTCTTGAACACGAACTTAATATATGACTGGACA +
Preference number: 2 (lower is better)
Translates to: RPVTFLASSSCTVLS*HALVLNTNLIYDWT
Trigger: TGTCCAGTCATATATTAAGTTCGTGTTCAAGACCAGGGCATGCAAGGAGAGGACTGTACATGAGGAACTGGCTAAAAATGTGACTGGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CAA 90 bp TCTTTTCACAGTTGTCCGTCTTCTCACTGCTCTTCTCATTGGTACTaGGATTGGAGTCAAGACTTGCTAAAGATGCTCTGGAGTCAGCAT +
Preference number: 2 (lower is better)
Translates to: SFHSCPSSHCSSHWY*DWSQDLLKMLWSQH
Trigger: ATGCTGACTCCAGAGCATCTTTAGCAAGTCTTGACTCCAATCCAAGTACCAATGAGAAGAGCAGTGAGAAGACGGACAACTGTGAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CAA 90 bp CATTGTGACAAGAGACCTGATGTCTGGCAGGAAGGATTGGATCCTTaGAGAGTTCCATTGTTCTGGGTGGACTGCACAAATTTAAATGCA +
Preference number: 2 (lower is better)
Translates to: HCDKRPDVWQEGLDP*RVPLFWVDCTNLNA
Trigger: TGCATTTAAATTTGTGCAGTCCACCCAGAACAATGGAACTCTCAAAGGATCCAATCCTTCCTGCCAGACATCAGGTCTCTTGTCACAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CAA 90 bp TGCCACTTCAATTGGATTCAGTTCTGTGCTCGATTGGCTAATTACTaGTATTCTCTTCTTCACGTAGGGGAACAGGTGACTCGTTGTCAG +
Preference number: 2 (lower is better)
Translates to: CHFNWIQFCARLANY*YSLLHVGEQVTRCQ
Trigger: CTGACAACGAGTCACCTGTTCCCCTACGTGAAGAAGAGAATACAAGTAATTAGCCAATCGAGCACAGAACTGAATCCAATTGAAGTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR TCA 90 bp ACACACATGTATAGCTGCTCCACCAGGATATTCTCATTGTATGGTGTATCTTGCTTTGCAGAATGCGGTTaGGGGTGTGGATCCATTCAT +
Preference number: 2 (lower is better)
Translates to: THMYSCSTRIFSLYGVSCFAECG*GCGSIH
Trigger: ATGAATGGATCCACACCCTCAACCGCATTCTGCAAA...GCAAGATACACCATACAATGAGAATATCCTGGTGGAGCAGCTATACATGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR TCA 90 bp TTCCATTGTGCAAAGCTGATTAAGCTCAGAAACCTTCTTGGACATCTCGTCAATGAGAAATCCGGATTCTaGGAGTGGTGCAGAACTGCT +
Preference number: 2 (lower is better)
Translates to: FHCAKLIKLRNLLGHLVNEKSGF*EWCRTA
Trigger: AGCAGTTCTGCACCACTCTCAGAATCCGGATTTCTC...ATTGACGAGATGTCCAAGAAGGTTTCTGAGCTTAATCAGCTTTGCACAATGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR TCA 90 bp TTCCATTGTGCAAAGCTGATTAAGCTCAGAAACCTTCTTGGACATCTCGTCAATTATGACTGGACAGAATaGTCCAGCTGCTCCTCATGG +
Preference number: 2 (lower is better)
Translates to: FHCAKLIKLRNLLGHLVNYDWTE*SSCSSW
Trigger: CCATGAGGAGCAGCTGGATCATTCTGTCCAGTCATA...ATTGACGAGATGTCCAAGAAGGTTTCTGAGCTTAATCAGCTTTGCACAATGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR TCA 90 bp GTCAGGGTACTTCTTTGCATTGGTTTCTTCAAGAAAAGCTCGTGCATAGGCCATCTAAAGCTAAGTGTCTaGCATCTTGGTCTTCCTGCA +
Preference number: 2 (lower is better)
Translates to: VRVLLCIGFFKKSSCIGHLKLSV*HLGLPA
Trigger: TGCAGGAAGACCAAGATGTCAGACACTTAGCTTTAG...ATGGCCTATGCACGAGCTTTTCTTGAAGAAACCAATGCAAAGAAGTACCCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CCA 90 bp ACTTTGTTGAATCGTAAACAAATTCTTCCACCTCCACTGTGGGTTCTGTTTGAGCCCTTGGAAGACGAGTaGGAAGTGGTATCTTCATCC +
Preference number: 2 (lower is better)
Translates to: TLLNRKQILPPPLWVLFEPLEDE*EVVSSS
Trigger: GGATGAAGATACCACTTCCCACTCGTCTTCCAAGGG...CTCAAACAGAACCCACAGTGGAGGTGGAAGAATTTGTTTACGATTCAACAAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CCA 90 bp GTCCGTCTTCTCACTGCTCTTCTCATTGGTACTTGGATTGGAGTCAAGACTTGCCTGTCCACATTTCCCTaGTTGTCCTTAAATACTGAT +
Preference number: 2 (lower is better)
Translates to: VRLLTALLIGTWIGVKTCLSTFP*LSLNTD
Trigger: ATCAGTATTTAAGGACAACCAGGGAAATGTGGACAG...GCAAGTCTTGACTCCAATCCAAGTACCAATGAGAAGAGCAGTGAGAAGACGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATCTTCATGACTGGAAGTaGAGTGCATCCATTGTGACA +
Preference number: 2 (lower is better)
Translates to: SSPRLAANSESSLRGGSDLHDWK*SASIVT
Trigger: TGTCACAATGGATGCACTCCACTTCCAGTCATGAAG...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTGGGGTCCAAATCCTTaGGGTTTACCTTGTTGGAAT +
Preference number: 2 (lower is better)
Translates to: SSPRLAANSESSLRGGSDWGPNP*GLPCWN
Trigger: ATTCCAACAAGGTAAACCCCAAGGATTTGGACCCCA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CAA 90 bp GGAGACTCCTGGTTTCTGCTTGATCTAACTTGTCAAATCGAAGAGTaGAGCCAATCAAAGACAAGGGTCTTGGGATCTTTTCACAGTTGT +
Preference number: 2 (lower is better)
Translates to: GDSWFLLDLTCQIEE*SQSKTRVLGSFHSC
Trigger: ACAACTGTGAAAAGATCCCAAGACCCTTGTCTTTGATTGGCTCAACTCTTCGATTTGACAAGTTAGATCAAGCAGAAACCAGGAGTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CAA 90 bp AGACCTGATGTCTGGCAGGAAGGATTGGATCCTTTGAGAGTTCCATaGTTCTGGGTGGACTGCACAAATTTAAATGCAGCAGCAATTTTT +
Preference number: 2 (lower is better)
Translates to: RPDVWQEGLDPLRVP*FWVDCTNLNAAAIF
Trigger: AAAAATTGCTGCTGCATTTAAATTTGTGCAGTCCACCCAGAACAATGGAACTCTCAAAGGATCCAATCCTTCCTGCCAGACATCAGGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR TCA 90 bp TGTTTCCTCTGGCGTGCATTCACAAGTTACAGAATTATCCAGCGAATCCAGACCATATTCAACCTGGCTTaGTCAACACTGCTCAAAGAA +
Preference number: 2 (lower is better)
Translates to: CFLWRAFTSYRIIQRIQTIFNLA*STLLKE
Trigger: TTCTTTGAGCAGTGTTGATCAAGCCAGGTTGAATAT...GGTCTGGATTCGCTGGATAATTCTGTAACTTGTGAATGCACGCCAGAGGAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR TCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATCTTAGGGTTTGCATTTaGGCTACACATTCACTGGAA +
Preference number: 2 (lower is better)
Translates to: SSPRLAANSESSLRGGSDLRVCI*ATHSLE
Trigger: TTCCAGTGAATGTGTAGCTCAAATGCAAACCCTAAG...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
3UTR-3UTR TCA 90 bp ACTTTGTTGAATCGTAAACAAATTCTTCCACCTCCACTGTGGGTTCTGTTTGAGTCCGTAACACATCCCTaGAGATTTGAGTTGAGGGCT +
Preference number: 2 (lower is better)
Translates to: TLLNRKQILPPPLWVLFESVTHP*RFELRA
Trigger: AGCCCTCAACTCAAATCTTCAGGGATGTGTTACGGA...CTCAAACAGAACCCACAGTGGAGGTGGAAGAATTTGTTTACGATTCAACAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR GCA 90 bp TTCCATTGTGCAAAGCTGATTAAGCTCAGAAACCTTCTTGGACATCTCGTCAATACATCTTGGTCTTCCTaGAGGGCAAAGCCAACTTCT +
Preference number: 2 (lower is better)
Translates to: FHCAKLIKLRNLLGHLVNTSWSS*RAKPTS
Trigger: AGAAGTTGGCTTTGCCCTGCAGGAAGACCAAGATGT...ATTGACGAGATGTCCAAGAAGGTTTCTGAGCTTAATCAGCTTTGCACAATGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR GCA 90 bp GTCAGGGTACTTCTTTGCATTGGTTTCTTCAAGAAAAGCTCGTGCATAGGCCATGGACATCTCGTCAATTaGCACTTCAATTGGATTCAG +
Preference number: 2 (lower is better)
Translates to: VRVLLCIGFFKKSSCIGHGHLVN*HFNWIQ
Trigger: CTGAATCCAATTGAAGTGGCAATTGACGAGATGTCC...ATGGCCTATGCACGAGCTTTTCTTGAAGAAACCAATGCAAAGAAGTACCCTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATAAGACGAGTGGGAAGTaGTATCTTCATCCTTATCAG +
Preference number: 2 (lower is better)
Translates to: SSPRLAANSESSLRGGSDKTSGK*YLHPYQ
Trigger: CTGATAAGGATGAAGATACCACTTCCCACTCGTCTT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CCA 90 bp GTCCGTCTTCTCACTGCTCTTCTCATTGGTACTTGGATTGGAGTCAAGACTTGCAGCTTTTTCTTCAAATaGTTTGATCACAGACTCAGG +
Preference number: 2 (lower is better)
Translates to: VRLLTALLIGTWIGVKTCSFFFK*FDHRLR
Trigger: CCTGAGTCTGTGATCAAACCATTTGAAGAAAAAGCT...GCAAGTCTTGACTCCAATCCAAGTACCAATGAGAAGAGCAGTGAGAAGACGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CCA 90 bp TCAGATAAATCCTTGGCATATTGTCCAGGAGCATGCCGTACAGGGGCATGTATAATATGGTGTTTCTCATaGAGTTGTGTTGGTAGCTCA +
Preference number: 2 (lower is better)
Translates to: SDKSLAYCPGACRTGACIIWCFS*SCVGSS
Trigger: TGAGCTACCAACACAACTCCATGAGAAACACCATAT...TATACATGCCCCTGTACGGCATGCTCCTGGACAATATGCCAAGGATTTATCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTTGCTAAAGATGCTCTaGAGTCAGCATGGTTTACTG +
Preference number: 2 (lower is better)
Translates to: SSPRLAANSESSLRGGSDLLKML*SQHGLL
Trigger: CAGTAAACCATGCTGACTCCAGAGCATCTTTAGCAA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CCA 90 bp ACACACATGTATAGCTGCTCCACCAGGATATTCTCATTGTATGGTGTATCTTGCTATGGCCTTCATGACTaGAAGTGGAGTGCATCCATT +
Preference number: 2 (lower is better)
Translates to: THMYSCSTRIFSLYGVSCYGLHD*KWSASI
Trigger: AATGGATGCACTCCACTTCCAGTCATGAAGGCCATA...GCAAGATACACCATACAATGAGAATATCCTGGTGGAGCAGCTATACATGTGTGT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR TCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATATATTCAACCTGGCTTaGTCAACACTGCTCAAAGAA +
Preference number: 2 (lower is better)
Translates to: SSPRLAANSESSLRGGSDIFNLA*STLLKE
Trigger: TTCTTTGAGCAGTGTTGATCAAGCCAGGTTGAATAT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
3UTR-3UTR TCA 90 bp TATTTCCAAATCACATGGTCGGATAGGACCATGACAAGATTGTCCAATTCATTTTCTTCCTGCTGTCTCTaGGGTCATAAAGTGCCACAC +
Preference number: 2 (lower is better)
Translates to: YFQITWSDRTMTRLSNSFSSCCL*GHKVPH
Trigger: GTGTGGCACTTTATGACCTCAGAGACAGCAGGAAGA...AAATGAATTGGACAATCTTGTCATGGTCCTATCCGACCATGTGATTTGGAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR TCA 90 bp CATGCTGATGTAATTGTTGACCATCTTAAACACATACCCTCGGTCCATAAATGTCCAAGAGCATCTGTCTaGCAGCAGCATGGTTTAGAT +
Preference number: 2 (lower is better)
Translates to: HADVIVDHLKHIPSVHKCPRASV*QQHGLD
Trigger: ATCTAAACCATGCTGCTGTCAGACAGATGCTCTTGG...ACATTTATGGACCGAGGGTATGTGTTTAAGATGGTCAACAATTACATCAGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR TCA 90 bp GTCAGGGTACTTCTTTGCATTGGTTTCTTCAAGAAAAGCTCGTGCATAGGCCATTTTGAGGTAGGTGACTaGGACATATCTTTCTCTCTT +
Preference number: 2 (lower is better)
Translates to: VRVLLCIGFFKKSSCIGHFEVGD*DISFSL
Trigger: AAGAGAGAAAGATATGTCTCAGTCACCTACCTCAAA...ATGGCCTATGCACGAGCTTTTCTTGAAGAAACCAATGCAAAGAAGTACCCTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR TCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTCATCTCTAGACCCCTaGTTAGATGTATTGACAGTA +
Preference number: 2 (lower is better)
Translates to: SSPRLAANSESSLRGGSDSSLDP*LDVLTV
Trigger: TACTGTCAATACATCTAATCAGGGGTCTAGAGATGA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR TCA 90 bp ACACACATGTATAGCTGCTCCACCAGGATATTCTCATTGTATGGTGTATCTTGCCCCTTGAAAGAACGCTaGAGGAAACTTGCATACAAA +
Preference number: 2 (lower is better)
Translates to: THMYSCSTRIFSLYGVSCPLKER*RKLAYK
Trigger: TTTGTATGCAAGTTTCCTTCAGCGTTCTTTCAAGGG...GCAAGATACACCATACAATGAGAATATCCTGGTGGAGCAGCTATACATGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR GCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTTCCCCGAGATTAGCTaGAAATTCAGAAAGTTCTCT +
Preference number: 2 (lower is better)
Translates to: SSPRLAANSESSLRGGSDFPEIS*KFRKFS
Trigger: AGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
3UTR-3UTR GCA 90 bp GTCAGGGTACTTCTTTGCATTGGTTTCTTCAAGAAAAGCTCGTGCATAGGCCATTTGTTAGTAATGAGTTaGTATCACAGGGGTGGGTAT +
Preference number: 2 (lower is better)
Translates to: VRVLLCIGFFKKSSCIGHLLVMS*YHRGGY
Trigger: ATACCCACCCCTGTGATAGCAACTCATTACTAACAA...ATGGCCTATGCACGAGCTTTTCTTGAAGAAACCAATGCAAAGAAGTACCCTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CCA 90 bp ACACACATGTATAGCTGCTCCACCAGGATATTCTCATTGTATGGTGTATCTTGCGGCAAATATTCAACCTaGCTTGATCAACACTGCTCA +
Preference number: 2 (lower is better)
Translates to: THMYSCSTRIFSLYGVSCGKYST*LDQHCS
Trigger: TGAGCAGTGTTGATCAAGCCAGGTTGAATATTTGCC...GCAAGATACACCATACAATGAGAATATCCTGGTGGAGCAGCTATACATGTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CCA 90 bp ATCTCTAGACCCCTGATTAGATGTATTGACAGTAAAAGGATACAGGTCCTTCAGATGCGGTTGAGGGTGTaGATCCATTCATCCATATCT +
Preference number: 2 (lower is better)
Translates to: ISRPLIRCIDSKRIQVLQMRLRV*IHSSIS
Trigger: AGATATGGATGAATGGATCCACACCCTCAACCGCAT...CTGAAGGACCTGTATCCTTTTACTGTCAATACATCTAATCAGGGGTCTAGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CCA 90 bp ATCTCTAGACCCCTGATTAGATGTATTGACAGTAAAAGGATACAGGTCCTTCAGCGACACTTTGAAAAGTaGTTTGCCACCATCAACCCA +
Preference number: 2 (lower is better)
Translates to: ISRPLIRCIDSKRIQVLQRHFEK*FATINP
Trigger: TGGGTTGATGGTGGCAAACCACTTTTCAAAGTGTCG...CTGAAGGACCTGTATCCTTTTACTGTCAATACATCTAATCAGGGGTCTAGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR TCA 90 bp ACTTTGTTGAATCGTAAACAAATTCTTCCACCTCCACTGTGGGTTCTGTTTGAGACATCCCTGAAGATTTaGGTTGAGGGCTTTACAGAT +
Preference number: 2 (lower is better)
Translates to: TLLNRKQILPPPLWVLFETSLKI*VEGFTD
Trigger: ATCTGTAAAGCCCTCAACTCAAATCTTCAGGGATGT...CTCAAACAGAACCCACAGTGGAGGTGGAAGAATTTGTTTACGATTCAACAAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR TCA 90 bp TTCCATTGTGCAAAGCTGATTAAGCTCAGAAACCTTCTTGGACATCTCGTCAATCAAATGTCGACACTTTaGAAAGTGGTTTGCCACCAT +
Preference number: 2 (lower is better)
Translates to: FHCAKLIKLRNLLGHLVNQMSTL*KVVCHH
Trigger: ATGGTGGCAAACCACTTTTCAAAGTGTCGACATTTG...ATTGACGAGATGTCCAAGAAGGTTTCTGAGCTTAATCAGCTTTGCACAATGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR TCA 90 bp TTCCATTGTGCAAAGCTGATTAAGCTCAGAAACCTTCTTGGACATCTCGTCAATTCAGATACTCTGCAATaGGAGCAGCAATATGGATGT +
Preference number: 2 (lower is better)
Translates to: FHCAKLIKLRNLLGHLVNSDTLQ*EQQYGC
Trigger: ACATCCATATTGCTGCTCTCATTGCAGAGTATCTGA...ATTGACGAGATGTCCAAGAAGGTTTCTGAGCTTAATCAGCTTTGCACAATGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR GCA 90 bp GCACACAGTTATATTCCGTGCCTTGTTGAAGCATTTCTGGCTATCATACTTGAGTTCCCCGAGATTAGCTaGAAATTCAGAAAGTTCTCT +
Preference number: 2 (lower is better)
Translates to: AHSYIPCLVEAFLAIILEFPEIS*KFRKFS
Trigger: AGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAA...CTCAAGTATGATAGCCAGAAATGCTTCAACAAGGCACGGAATATAACTGTGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTTGTTGAAGCATTTCTaGCTATCATACTTGAGGTGT +
Preference number: 2 (lower is better)
Translates to: SSPRLAANSESSLRGGSDLLKHF*LSYLRC
Trigger: ACACCTCAAGTATGATAGCCAGAAATGCTTCAACAA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CCA 90 bp GTCAGGGTACTTCTTTGCATTGGTTTCTTCAAGAAAAGCTCGTGCATAGGCCATTTTCATTGGAGTTGCTaGTCATGGTATTGTCTAACA +
Preference number: 2 (lower is better)
Translates to: VRVLLCIGFFKKSSCIGHFHWSC*SWYCLT
Trigger: TGTTAGACAATACCATGACCAGCAACTCCAATGAAA...ATGGCCTATGCACGAGCTTTTCTTGAAGAAACCAATGCAAAGAAGTACCCTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR TCA 90 bp TTCCATTGTGCAAAGCTGATTAAGCTCAGAAACCTTCTTGGACATCTCGTCAATAATTTTCACCTCATCTaGGAAATCCGGATTCTGAGA +
Preference number: 2 (lower is better)
Translates to: FHCAKLIKLRNLLGHLVNNFHLI*EIRILR
Trigger: TCTCAGAATCCGGATTTCTCAGATGAGGTGAAAATT...ATTGACGAGATGTCCAAGAAGGTTTCTGAGCTTAATCAGCTTTGCACAATGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR TCA 90 bp ACACACATGTATAGCTGCTCCACCAGGATATTCTCATTGTATGGTGTATCTTGCGACCCTTTTCATCAATaGATTTTGACAGTCACATTG +
Preference number: 2 (lower is better)
Translates to: THMYSCSTRIFSLYGVSCDPFHQ*ILTVTL
Trigger: CAATGTGACTGTCAAAATTCATTGATGAAAAGGGTC...GCAAGATACACCATACAATGAGAATATCCTGGTGGAGCAGCTATACATGTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR GCA 90 bp CATGCTGATGTAATTGTTGACCATCTTAAACACATACCCTCGGTCCATAAATGTCTGTTTCCTCTGGCGTaGATTCACAAGTTACAGAAT +
Preference number: 2 (lower is better)
Translates to: HADVIVDHLKHIPSVHKCLFPLA*IHKLQN
Trigger: ATTCTGTAACTTGTGAATGCACGCCAGAGGAAACAG...ACATTTATGGACCGAGGGTATGTGTTTAAGATGGTCAACAATTACATCAGCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CAA 90 bp ACAGCTTTGATGAGTTGTAAGTGGGACCGGACAATTGACTTCTGCTaGTTAAATTCAAAATTCTTCCTCATGAAAAAGTACAGAAGGGCT +
Preference number: 2 (lower is better)
Translates to: TALMSCKWDRTIDFC*LNSKFFLMKKYRRA
Trigger: AGCCCTTCTGTACTTTTTCATGAGGAAGAATTTTGAATTTAACAAGCAGAAGTCAATTGTCCGGTCCCACTTACAACTCATCAAAGCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR TCA 90 bp TATTTCCAAATCACATGGTCGGATAGGACCATGACAAGATTGTCCAATTCATTTCTTAGGGTTTGCATTTaGGCTACACATTCACTGGAA +
Preference number: 2 (lower is better)
Translates to: YFQITWSDRTMTRLSNSFLRVCI*ATHSLE
Trigger: TTCCAGTGAATGTGTAGCTCAAATGCAAACCCTAAG...AAATGAATTGGACAATCTTGTCATGGTCCTATCCGACCATGTGATTTGGAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR TCA 90 bp TTCCATTGTGCAAAGCTGATTAAGCTCAGAAACCTTCTTGGACATCTCGTCAATAGGTATCTGAAATTTTaGAGACAAACGTCCAAGATG +
Preference number: 2 (lower is better)
Translates to: FHCAKLIKLRNLLGHLVNRYLKF*RQTSKM
Trigger: CATCTTGGACGTTTGTCTTCAAAATTTCAGATACCT...ATTGACGAGATGTCCAAGAAGGTTTCTGAGCTTAATCAGCTTTGCACAATGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CAA 90 bp TCATTGGAGTTGCTGGTCATGGTATTGTCTAACATCTGTAAGAGTTaGGGGTTAGAAAGTGCATTTTTGCCTCGAATTATAGGTAAAGTT +
Preference number: 2 (lower is better)
Translates to: SLELLVMVLSNICKS*GLESAFLPRIIGKV
Trigger: AACTTTACCTATAATTCGAGGCAAAAATGCACTTTCTAACCCCAAACTCTTACAGATGTTAGACAATACCATGACCAGCAACTCCAATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR TCA 90 bp TATTTCCAAATCACATGGTCGGATAGGACCATGACAAGATTGTCCAATTCATTTTATCTTCTGTTTCTGTaGGGTACTTTGCAAAGTCTG +
Preference number: 2 (lower is better)
Translates to: YFQITWSDRTMTRLSNSFYLLFL*GTLQSL
Trigger: CAGACTTTGCAAAGTACCTCACAGAAACAGAAGATA...AAATGAATTGGACAATCTTGTCATGGTCCTATCCGACCATGTGATTTGGAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR TCA 90 bp TATTTCCAAATCACATGGTCGGATAGGACCATGACAAGATTGTCCAATTCATTTCACGAACTTAATATATaGCTGGACAGAATGATCCAG +
Preference number: 2 (lower is better)
Translates to: YFQITWSDRTMTRLSNSFHELNI*LDRMIQ
Trigger: CTGGATCATTCTGTCCAGTCATATATTAAGTTCGTG...AAATGAATTGGACAATCTTGTCATGGTCCTATCCGACCATGTGATTTGGAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CCA 90 bp TATTTCCAAATCACATGGTCGGATAGGACCATGACAAGATTGTCCAATTCATTTCAGACTTGTTGCTATTaGGATGTTGTACTCTTGAGA +
Preference number: 2 (lower is better)
Translates to: YFQITWSDRTMTRLSNSFQTCCY*DVVLLR
Trigger: TCTCAAGAGTACAACATCCCAATAGCAACAAGTCTG...AAATGAATTGGACAATCTTGTCATGGTCCTATCCGACCATGTGATTTGGAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR TCA 90 bp TATTTCCAAATCACATGGTCGGATAGGACCATGACAAGATTGTCCAATTCATTTCTGAGTATTTACTGTTaGTACAACAAATGTCGACAC +
Preference number: 2 (lower is better)
Translates to: YFQITWSDRTMTRLSNSFLSIYC*YNKCRH
Trigger: GTGTCGACATTTGTTGTATCAACAGTAAATACTCAG...AAATGAATTGGACAATCTTGTCATGGTCCTATCCGACCATGTGATTTGGAAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CCA 90 bp CATGCTGATGTAATTGTTGACCATCTTAAACACATACCCTCGGTCCATAAATGTATACTTGTTGGAGTCTaGGTTCTTAATATAAGGTTC +
Preference number: 2 (lower is better)
Translates to: HADVIVDHLKHIPSVHKCILVGV*VLNIRF
Trigger: GAACCTTATATTAAGAACCCAGACTCCAACAAGTAT...ACATTTATGGACCGAGGGTATGTGTTTAAGATGGTCAACAATTACATCAGCATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR GCA 72 bp GGAACAGGTGACTCGTTGTCAGGATCGTCCGCCGCTTaGACTGCTCCGCCACCCCACCGTGCTTCTTGCCCG +
Preference number: 3 (lower is better)
Translates to: GTGDSLSGSSAA*TAPPPHRASCP
Trigger: CGGGCAAGAAGCACGGTGGGGTGGCGGAGCAGTGCAAGCGGCGGACGATCCTGACAACGAGTCACCTGTTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR GCA 72 bp CTCCTCCTCCCTTGGAGGGGCCCCTCAGGACTGATTTaGAGAATGCGGTTGAGGGTGTGGATCCATTCATCC +
Preference number: 3 (lower is better)
Translates to: LLLPWRGPSGLI*RMRLRVWIHSS
Trigger: GGATGAATGGATCCACACCCTCAACCGCATTCTGCAAATCAGTCCTGAGGGGCCCCTCCAAGGGAGGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CCA 72 bp GCCGGAGTTGCTTTGCTAATTACTCGAGTGCAGGTTTaGTCCACTCCGCGCTTTGACAGGTCGTCCCTGCCC +
Preference number: 3 (lower is better)
Translates to: AGVALLITRVQV*STPRFDRSSLP
Trigger: GGGCAGGGACGACCTGTCAAAGCGCGGAGTGGACCAAACCTGCACTCGAGTAATTAGCAAAGCAACTCCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CCA 72 bp ACAAACGTCCAAGATGCTGAAGAAGTCGGACACCTCTaGGCTGGGAGCTCTCTGCCAGTAGGCAATCAGAGT +
Preference number: 3 (lower is better)
Translates to: TNVQDAEEVGHL*AGSSLPVGNQS
Trigger: ACTCTGATTGCCTACTGGCAGAGAGCTCCCAGCCCAGAGGTGTCCGACTTCTTCAGCATCTTGGACGTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CCA 72 bp AACCGAGAGCCTCCAATCCCAGCATCGGCTATTAACTaGCTCACAGCTTTGATGAGTTGTAAGTGGGACCGG +
Preference number: 3 (lower is better)
Translates to: NREPPIPASAIN*LTALMSCKWDR
Trigger: CCGGTCCCACTTACAACTCATCAAAGCTGTGAGCCAGTTAATAGCCGATGCTGGGATTGGAGGCTCTCGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CAA 90 bp ACACACATGTATAGCTGCTCCACCAGGATATTCTCATTGTATGGTGTATCTTGCTGTGCTCCTCCTCCCTaGGAGGGGCCCCTCAGGACT +
Preference number: 3 (lower is better)
Translates to: THMYSCSTRIFSLYGVSCCAPPP*EGPLRT
Trigger: AGTCCTGAGGGGCCCCTCCAAGGGAGGAGGAGCACA...GCAAGATACACCATACAATGAGAATATCCTGGTGGAGCAGCTATACATGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CAA 90 bp CACCTCTGGGCTGGGAGCTCTCTGCCAGTAGGCAATCAGAGTCTCGTACGAAATTGGGATGTTGTACTCTaGAGAAGCTATCTGATCGTG +
Preference number: 3 (lower is better)
Translates to: HLWAGSSLPVGNQSLVRNWDVVL*RSYLIV
Trigger: CACGATCAGATAGCTTCTCAAGAGTACAACATCCCA...ATTTCGTACGAGACTCTGATTGCCTACTGGCAGAGAGCTCCCAGCCCAGAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR TCA 72 bp AATTACTCGAGTGCAGGTTTGGTCCACTCCGCGCTTTaGCAGGTCGTCCCTGCCCGTAATCACTTTTGCTTA +
Preference number: 3 (lower is better)
Translates to: NYSSAGLVHSAL*QVVPARNHFCL
Trigger: TAAGCAAAAGTGATTACGGGCAGGGACGACCTGTCAAAGCGCGGAGTGGACCAAACCTGCACTCGAGTAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR GCA 72 bp GTTTTCTGTGGTTTCTGGGCTCCTCGGCGTGAAGGGTaGTGCAGGAAGTTTGAGGAAGGATTGTTTTGCTGT +
Preference number: 3 (lower is better)
Translates to: VFCGFWAPRREG*CRKFEEGLFCC
Trigger: ACAGCAAAACAATCCTTCCTCAAACTTCCTGCAGCACCCTTCACGCCGAGGAGCCCAGAAACCACAGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458608.1
3UTR-3UTR CAA 90 bp CACCTCTGGGCTGGGAGCTCTCTGCCAGTAGGCAATCAGAGTCTCGTACGAAATCGGTATTTTCCCAATTaGCTGCAGAATTGTCTGTTG +
Preference number: 3 (lower is better)
Translates to: HLWAGSSLPVGNQSLVRNRYFPN*LQNCLL
Trigger: CAACAGACAATTCTGCAGCAAATTGGGAAAATACCG...ATTTCGTACGAGACTCTGATTGCCTACTGGCAGAGAGCTCCCAGCCCAGAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CAA 90 bp CACCTCTGGGCTGGGAGCTCTCTGCCAGTAGGCAATCAGAGTCTCGTACGAAATATATTCCGTGCCTTGTaGAAGCATTTCTGGCTATCA +
Preference number: 3 (lower is better)
Translates to: HLWAGSSLPVGNQSLVRNIFRAL*KHFWLS
Trigger: TGATAGCCAGAAATGCTTCAACAAGGCACGGAATAT...ATTTCGTACGAGACTCTGATTGCCTACTGGCAGAGAGCTCCCAGCCCAGAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CCA 72 bp CAGCCTCAGATAAATCTCCGTTTCTGGCATGAATCTTaGCCATACTTTCCAGCCAGGTCCTGCGTAGTTCAG +
Preference number: 3 (lower is better)
Translates to: QPQINLRFWHES*PYFPARSCVVQ
Trigger: CTGAACTACGCAGGACCTGGCTGGAAAGTATGGCCAAGATTCATGCCAGAAACGGAGATTTATCTGAGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CAA 90 bp CACCTCTGGGCTGGGAGCTCTCTGCCAGTAGGCAATCAGAGTCTCGTACGAAATAATATTCAACCTGGCTaGATCAACACTGCTCAAAGA +
Preference number: 3 (lower is better)
Translates to: HLWAGSSLPVGNQSLVRNNIQPG*INTAQR
Trigger: TCTTTGAGCAGTGTTGATCAAGCCAGGTTGAATATT...ATTTCGTACGAGACTCTGATTGCCTACTGGCAGAGAGCTCCCAGCCCAGAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CAA 90 bp GCCAGTTCCTCATGTACAGTCCTCTCCTTGCATGCCCTGGTCTTGAACACGAACTCTCATGGAGTTGTGTaGGTAGCTCAATTTTCACCT +
Preference number: 3 (lower is better)
Translates to: ASSSCTVLSLHALVLNTNSHGVV*VAQFSP
Trigger: AGGTGAAAATTGAGCTACCAACACAACTCCATGAGA...GTTCGTGTTCAAGACCAGGGCATGCAAGGAGAGGACTGTACATGAGGAACTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTGCTCCTCATGGCACTaGGCCACAATGTCGGTCAGA +
Preference number: 3 (lower is better)
Translates to: SSPRLAANSESSLRGGSDCSSWH*ATMSVR
Trigger: TCTGACCGACATTGTGGCCAAGTGCCATGAGGAGCA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CCA 72 bp CCCTCAGGACTGATTTGCAGAATGCGGTTGAGGGTGTaGATCCATTCATCCATATCTGACTCTGTTTCAGCT +
Preference number: 3 (lower is better)
Translates to: PSGLICRMRLRV*IHSSISDSVSA
Trigger: AGCTGAAACAGAGTCAGATATGGATGAATGGATCCACACCCTCAACCGCATTCTGCAAATCAGTCCTGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CCA 72 bp AGCATGCCGTACAGGGGCATGTATAAACTTGCTATCTaGGCCTGCTTTCTTGGCTCTCTGTATCGATCATCA +
Preference number: 3 (lower is better)
Translates to: SMPYRGMYKLAI*ACFLGSLYRSS
Trigger: TGATGATCGATACAGAGAGCCAAGAAAGCAGGCCCAGATAGCAAGTTTATACATGCCCCTGTACGGCATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CCA 72 bp GTGGAGTGCATCCATTGTGACAAGAGACCTGATGTCTaGCAGGAAGGATTGGATCCTTTGAGAGTTCCATTG +
Preference number: 3 (lower is better)
Translates to: VECIHCDKRPDV*QEGLDPLRVPL
Trigger: CAATGGAACTCTCAAAGGATCCAATCCTTCCTGCCAGACATCAGGTCTCTTGTCACAATGGATGCACTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CAA 90 bp GCACACAGTTATATTCCGTGCCTTGTTGAAGCATTTCTGGCTATCATACTTGAGCCCCTCAGGACTGATTaGCAGAATGCGGTTGAGGGT +
Preference number: 3 (lower is better)
Translates to: AHSYIPCLVEAFLAIILEPLRTD*QNAVEG
Trigger: ACCCTCAACCGCATTCTGCAAATCAGTCCTGAGGGG...CTCAAGTATGATAGCCAGAAATGCTTCAACAAGGCACGGAATATAACTGTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CAA 90 bp GCCAGTTCCTCATGTACAGTCCTCTCCTTGCATGCCCTGGTCTTGAACACGAACTCCACATTTCCCTGGTaGTCCTTAAATACTGATCTT +
Preference number: 3 (lower is better)
Translates to: ASSSCTVLSLHALVLNTNSTFPW*SLNTDL
Trigger: AAGATCAGTATTTAAGGACAACCAGGGAAATGTGGA...GTTCGTGTTCAAGACCAGGGCATGCAAGGAGAGGACTGTACATGAGGAACTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CAA 90 bp TCAGATAAATCCTTGGCATATTGTCCAGGAGCATGCCGTACAGGGGCATGTATATGCTCCAAGGGAACGTaGTCAACAGCAATATCCAGG +
Preference number: 3 (lower is better)
Translates to: SDKSLAYCPGACRTGACICSKGT*STAISR
Trigger: CCTGGATATTGCTGTTGACAACGTTCCCTTGGAGCA...TATACATGCCCCTGTACGGCATGCTCCTGGACAATATGCCAAGGATTTATCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CAA 90 bp TCAGATAAATCCTTGGCATATTGTCCAGGAGCATGCCGTACAGGGGCATGTATAAATGTAAAGCAGCGCTaGAGAAATCTGGCAACGCTG +
Preference number: 3 (lower is better)
Translates to: SDKSLAYCPGACRTGACINVKQR*RNLATL
Trigger: CAGCGTTGCCAGATTTCTCAAGCGCTGCTTTACATT...TATACATGCCCCTGTACGGCATGCTCCTGGACAATATGCCAAGGATTTATCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR TCA 72 bp AATGCGGTTGAGGGTGTGGATCCATTCATCCATATCTaGCTCTGTTTCAGCTGCCAGCACAAAATAGGTCAG +
Preference number: 3 (lower is better)
Translates to: NAVEGVDPFIHI*LCFSCQHKIGQ
Trigger: CTGACCTATTTTGTGCTGGCAGCTGAAACAGAGTCAGATATGGATGAATGGATCCACACCCTCAACCGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR TCA 72 bp TTTCCAAAGCCACAGAAGCCCCCAAGAGCATCTGTCTaGCAGCAGCATGGTTTAGATCCACATGAAAATCAG +
Preference number: 3 (lower is better)
Translates to: FPKPQKPPRASV*QQHGLDPHENQ
Trigger: CTGATTTTCATGTGGATCTAAACCATGCTGCTGTCAGACAGATGCTCTTGGGGGCTTCTGTGGCTTTGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR TCA 72 bp CCATTCCTCTGGAAGTCCCTTGATGTGAGGTTCTTCTaGTTGTCTTGGAGTGATGGTGTCGATGTTGCCATT +
Preference number: 3 (lower is better)
Translates to: PFLWKSLDVRFF*LSWSDGVDVAI
Trigger: AATGGCAACATCGACACCATCACTCCAAGACAATCAGAAGAACCTCACATCAAGGGACTTCCAGAGGAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR TCA 72 bp AGGCAAACACATGCTTCAGCGCTGTGGCTGACTGATTaGCTTGGAAAAAGAGCATGTAGGTATCAAAGACCC +
Preference number: 3 (lower is better)
Translates to: RQTHASALWLTD*LGKRACRYQRP
Trigger: GGGTCTTTGATACCTACATGCTCTTTTTCCAAGTCAATCAGTCAGCCACAGCGCTGAAGCATGTGTTTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR TCA 72 bp TCTCAAGGAGGCAAACACATGCTTCAGCGCTGTGGCTaGCTGATTGACTTGGAAAAAGAGCATGTAGGTATC +
Preference number: 3 (lower is better)
Translates to: SQGGKHMLQRCG*LIDLEKEHVGI
Trigger: GATACCTACATGCTCTTTTTCCAAGTCAATCAGTCAGCCACAGCGCTGAAGCATGTGTTTGCCTCCTTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR TCA 72 bp CTCATGAAAAAGTACAGAAGGGCTGAGGCTTCTGTCTaGGTTGACCGTGACCTGTGGTTACAGCATTTTAGG +
Preference number: 3 (lower is better)
Translates to: LMKKYRRAEASV*VDRDLWLQHFR
Trigger: CCTAAAATGCTGTAACCACAGGTCACGGTCAACTCAGACAGAAGCCTCAGCCCTTCTGTACTTTTTCATGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR GCA 72 bp CCTTCAGATAAATCCTTGGCATATTGTCCAGGAGCATaGCGTACAGGGGCATGTATAAACTTGCTATCTGGG +
Preference number: 3 (lower is better)
Translates to: PSDKSLAYCPGA*RTGACINLLSG
Trigger: CCCAGATAGCAAGTTTATACATGCCCCTGTACGGCATGCTCCTGGACAATATGCCAAGGATTTATCTGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR GCA 72 bp AAGGGTGTCTCGAAGACAAAGCGGTTGATGTTGTGGTaGATTTCGAAATCTGTCTTCCGGTCTTCGATTTCC +
Preference number: 3 (lower is better)
Translates to: KGVSKTKRLMLW*ISKSVFRSSIS
Trigger: GGAAATCGAAGACCGGAAGACAGATTTCGAAATGCACCACAACATCAACCGCTTTGTCTTCGAGACACCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CCA 72 bp GACAGTAAAAGGATACAGGTCCTTCAGATAAATCCTTaGCATATTGTCCAGGAGCATGCCGTACAGGGGCAT +
Preference number: 3 (lower is better)
Translates to: DSKRIQVLQINP*HIVQEHAVQGH
Trigger: ATGCCCCTGTACGGCATGCTCCTGGACAATATGCCAAGGATTTATCTGAAGGACCTGTATCCTTTTACTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CCA 72 bp GTGAAGGGTGTCTCGAAGACAAAGCGGTTGATGTTGTaGTGCATTTCGAAATCTGTCTTCCGGTCTTCGATT +
Preference number: 3 (lower is better)
Translates to: VKGVSKTKRLML*CISKSVFRSSI
Trigger: AATCGAAGACCGGAAGACAGATTTCGAAATGCACCACAACATCAACCGCTTTGTCTTCGAGACACCCTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CCA 72 bp ATTGGTTTCTTCAAGAAAAGCTCGTGCATAGGCCATTaGCCCAGCATTAACCTTCACGCTGACACTTCCTTG +
Preference number: 3 (lower is better)
Translates to: IGFFKKSSCIGH*PSINLHADTSL
Trigger: CAAGGAAGTGTCAGCGTGAAGGTTAATGCTGGGCCAATGGCCTATGCACGAGCTTTTCTTGAAGAAACCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CAA 90 bp GTCCGTCTTCTCACTGCTCTTCTCATTGGTACTTGGATTGGAGTCAAGACTTGCAGAGCCTCCTTCTTTTaGGCATTAGCTTTTGCATTG +
Preference number: 3 (lower is better)
Translates to: VRLLTALLIGTWIGVKTCRASFF*ALAFAL
Trigger: CAATGCAAAAGCTAATGCCAAAAAGAAGGAGGCTCT...GCAAGTCTTGACTCCAATCCAAGTACCAATGAGAAGAGCAGTGAGAAGACGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATGATAGCTGTCTGGCTTaGAAATCCTCCATTGGTGCT +
Preference number: 3 (lower is better)
Translates to: SSPRLAANSESSLRGGSDDSCLA*KSSIGA
Trigger: AGCACCAATGGAGGATTTCAAAGCCAGACAGCTATC...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR TCA 72 bp GGAAATTTTAGCCATTCCTCTGGAAGTCCCTTGATGTaGGGTTCTTCTGATTGTCTTGGAGTGATGGTGTCG +
Preference number: 3 (lower is better)
Translates to: GNFSHSSGSPLM*GSSDCLGVMVS
Trigger: CGACACCATCACTCCAAGACAATCAGAAGAACCTCACATCAAGGGACTTCCAGAGGAATGGCTAAAATTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR TCA 72 bp GTCTTGAACACGAACTTAATATATGACTGGACAGAATaGTCCAGCTGCTCCTCATGGCACTTGGCCACAATG +
Preference number: 3 (lower is better)
Translates to: VLNTNLIYDWTE*SSCSSWHLATM
Trigger: CATTGTGGCCAAGTGCCATGAGGAGCAGCTGGATCATTCTGTCCAGTCATATATTAAGTTCGTGTTCAAGAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR TCA 72 bp CAAACCTCCGTAGCTATATTGGCCTCAGTGTCTACATaGTGCACGATGTCTATTTCATTGGAGTTGCTGGTC +
Preference number: 3 (lower is better)
Translates to: QTSVAILASVST*CTMSISLELLV
Trigger: GACCAGCAACTCCAATGAAATAGACATCGTGCATCATGTAGACACTGAGGCCAATATAGCTACGGAGGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR GCA 72 bp GTCTTGGGATCTTTTCACAGTTGTCCGTCTTCTCACTaGTCTTCTCATTGGTACTTGGATTGGAGTCAAGAC +
Preference number: 3 (lower is better)
Translates to: VLGSFHSCPSSH*SSHWYLDWSQD
Trigger: GTCTTGACTCCAATCCAAGTACCAATGAGAAGAGCAGTGAGAAGACGGACAACTGTGAAAAGATCCCAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR GCA 72 bp GTACTTCTTTGCATTGGTTTCTTCAAGAAAAGCTCGTaGATAGGCCATTGGCCCAGCATTAACCTTCACGCT +
Preference number: 3 (lower is better)
Translates to: VLLCIGFFKKSS*IGHWPSINLHA
Trigger: AGCGTGAAGGTTAATGCTGGGCCAATGGCCTATGCACGAGCTTTTCTTGAAGAAACCAATGCAAAGAAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CCA 72 bp GAACGTTGTCAACAGCAATATCCAGGCTTCCAGGAATaGTCTGCATTTTGCTTATTCTGTCGGCCCTTCTAT +
Preference number: 3 (lower is better)
Translates to: ERCQQQYPGFQE*SAFCLFCRPFY
Trigger: ATAGAAGGGCCGACAGAATAAGCAAAATGCAGACCATTCCTGGAAGCCTGGATATTGCTGTTGACAACGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATCGAACAGTAACGGTGTaGTTCACGGTGCTGTTAAAA +
Preference number: 3 (lower is better)
Translates to: SSPRLAANSESSLRGGSDRTVTV*FTVLLK
Trigger: TTTTAACAGCACCGTGAACAACACCGTTACTGTTCG...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CAA 90 bp GAAGAATCTGTTTCCTCTGGCGTGCATTCACAAGTTACAGAATTATCCAGCGAAATTTGCAGAATGCGGTaGAGGGTGTGGATCCATTCA +
Preference number: 3 (lower is better)
Translates to: EESVSSGVHSQVTELSSEICRMR*RVWIHS
Trigger: TGAATGGATCCACACCCTCAACCGCATTCTGCAAAT...TTCGCTGGATAATTCTGTAACTTGTGAATGCACGCCAGAGGAAACAGATTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CAA 90 bp CATGCTGATGTAATTGTTGACCATCTTAAACACATACCCTCGGTCCATAAATGTTGTACAGTCCTCTCCTaGCATGCCCTGGTCTTGAAC +
Preference number: 3 (lower is better)
Translates to: HADVIVDHLKHIPSVHKCCTVLS*HALVLN
Trigger: GTTCAAGACCAGGGCATGCAAGGAGAGGACTGTACA...ACATTTATGGACCGAGGGTATGTGTTTAAGATGGTCAACAATTACATCAGCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CAA 90 bp ACTTTGTTGAATCGTAAACAAATTCTTCCACCTCCACTGTGGGTTCTGTTTGAGAAGGTTCGGCACCACTaGCAATGTTTCCCATCAAGA +
Preference number: 3 (lower is better)
Translates to: TLLNRKQILPPPLWVLFEKVRHH*QCFPSR
Trigger: TCTTGATGGGAAACATTGCAAGTGGTGCCGAACCTT...CTCAAACAGAACCCACAGTGGAGGTGGAAGAATTTGTTTACGATTCAACAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CAA 90 bp ACACACATGTATAGCTGCTCCACCAGGATATTCTCATTGTATGGTGTATCTTGCGCAGACTTGTTGCTATaGGGATGTTGTACTCTTGAG +
Preference number: 3 (lower is better)
Translates to: THMYSCSTRIFSLYGVSCADLLL*GCCTLE
Trigger: CTCAAGAGTACAACATCCCAATAGCAACAAGTCTGC...GCAAGATACACCATACAATGAGAATATCCTGGTGGAGCAGCTATACATGTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR TCA 72 bp TCCACAGAGTTTGCATGTTTGATAGCTGTCTGGCTTTaGAATCCTCCATTGGTGCTTAGATCATCTCTAGAC +
Preference number: 3 (lower is better)
Translates to: STEFACLIAVWL*NPPLVLRSSLD
Trigger: GTCTAGAGATGATCTAAGCACCAATGGAGGATTTCAAAGCCAGACAGCTATCAAACATGCAAACTCTGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR TCA 72 bp CTTTCCAGTAACCCTTTCTTTTCAGATACTCTGCAATaGGAGCAGCAATATGGATGTAACACATGGCAGCCT +
Preference number: 3 (lower is better)
Translates to: LSSNPFFSDTLQ*EQQYGCNTWQP
Trigger: AGGCTGCCATGTGTTACATCCATATTGCTGCTCTCATTGCAGAGTATCTGAAAAGAAAGGGTTACTGGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR GCA 72 bp GGAGTCTGGGTTCTTAATATAAGGTTCGGCACCACTTaGAATGTTTCCCATCAAGACTTTTTCGATTTTGGC +
Preference number: 3 (lower is better)
Translates to: GVWVLNIRFGTT*NVSHQDFFDFG
Trigger: GCCAAAATCGAAAAAGTCTTGATGGGAAACATTGCAAGTGGTGCCGAACCTTATATTAAGAACCCAGACTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR GCA 72 bp CATTTGCTTATCTCCATTGGCGAAATTATTGGTAATTaGAAGCGAATGTTGAAACCGAGAGCCTCCAATCCC +
Preference number: 3 (lower is better)
Translates to: HLLISIGEIIGN*KRMLKPRASNP
Trigger: GGGATTGGAGGCTCTCGGTTTCAACATTCGCTTGCAATTACCAATAATTTCGCCAATGGAGATAAGCAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR GCA 72 bp AACAGTCCTTATACGCTTAGTCAGGTCCTTCACCTCTaGTGGGAAATTGCTGTTTTTCATTTGCTTATCTCC +
Preference number: 3 (lower is better)
Translates to: NSPYTLSQVLHL*WEIAVFHLLIS
Trigger: GGAGATAAGCAAATGAAAAACAGCAATTTCCCAGCAGAGGTGAAGGACCTGACTAAGCGTATAAGGACTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR GCA 72 bp TCAGACTTCCAGAGAAACTCCACACACATGTATAGCTaGTCCACCAGGATATTCTCATTGTATGGTGTATCT +
Preference number: 3 (lower is better)
Translates to: SDFQRNSTHMYS*STRIFSLYGVS
Trigger: AGATACACCATACAATGAGAATATCCTGGTGGAGCAGCTATACATGTGTGTGGAGTTTCTCTGGAAGTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATAATATTCAACCTGGCTaGATCAACACTGCTCAAAGA +
Preference number: 3 (lower is better)
Translates to: SSPRLAANSESSLRGGSDNIQPG*INTAQR
Trigger: TCTTTGAGCAGTGTTGATCAAGCCAGGTTGAATATT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
3UTR-3UTR CAA 90 bp GTCAGGGTACTTCTTTGCATTGGTTTCTTCAAGAAAAGCTCGTGCATAGGCCATTTTTCTTCAAATGGTTaGATCACAGACTCAGGTTCC +
Preference number: 3 (lower is better)
Translates to: VRVLLCIGFFKKSSCIGHFSSNG*ITDSGS
Trigger: GGAACCTGAGTCTGTGATCAAACCATTTGAAGAAAA...ATGGCCTATGCACGAGCTTTTCTTGAAGAAACCAATGCAAAGAAGTACCCTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CAA 90 bp CATGCTGATGTAATTGTTGACCATCTTAAACACATACCCTCGGTCCATAAATGTGTGATGGTGTCGATGTaGCCATTTTCCAAAGCCACA +
Preference number: 3 (lower is better)
Translates to: HADVIVDHLKHIPSVHKCVMVSM*PFSKAT
Trigger: TGTGGCTTTGGAAAATGGCAACATCGACACCATCAC...ACATTTATGGACCGAGGGTATGTGTTTAAGATGGTCAACAATTACATCAGCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CAA 90 bp ATCTCTAGACCCCTGATTAGATGTATTGACAGTAAAAGGATACAGGTCCTTCAGACGATGTTACACAATTaGGATGCTCCAAGGGAACGT +
Preference number: 3 (lower is better)
Translates to: ISRPLIRCIDSKRIQVLQTMLHN*DAPRER
Trigger: ACGTTCCCTTGGAGCATCCAAATTGTGTAACATCGT...CTGAAGGACCTGTATCCTTTTACTGTCAATACATCTAATCAGGGGTCTAGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CAA 90 bp GGTAAGATTCAGGAAATCTCTGAGGCCGGGGAAGCTGGATTTTATTTGTGTCAATTGCATGCCCTGGTCTaGAACACGAACTTAATATAT +
Preference number: 3 (lower is better)
Translates to: GKIQEISEAGEAGFYLCQLHALV*NTNLIY
Trigger: ATATATTAAGTTCGTGTTCAAGACCAGGGCATGCAA...TTGACACAAATAAAATCCAGCTTCCCCGGCCTCAGAGATTTCCTGAATCTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATCCATTGGCGAAATTATaGGTAATTGCAAGCGAATGT +
Preference number: 3 (lower is better)
Translates to: SSPRLAANSESSLRGGSDPLAKL*VIASEC
Trigger: ACATTCGCTTGCAATTACCAATAATTTCGCCAATGG...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR GCA 72 bp TTCCACTTTCCAGTAACCCTTTCTTTTCAGATACTCTaGAATGAGAGCAGCAATATGGATGTAACACATGGC +
Preference number: 3 (lower is better)
Translates to: FHFPVTLSFQIL*NESSNMDVTHG
Trigger: GCCATGTGTTACATCCATATTGCTGCTCTCATTGCAGAGTATCTGAAAAGAAAGGGTTACTGGAAAGTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CCA 72 bp AATGGTGAAAATCTTGAGTCTCTGTCCACATTTCCCTaGTTGTCCTTAAATACTGATCTTACTGCCCAAGCA +
Preference number: 3 (lower is better)
Translates to: NGENLESLSTFP*LSLNTDLTAQA
Trigger: TGCTTGGGCAGTAAGATCAGTATTTAAGGACAACCAGGGAAATGTGGACAGAGACTCAAGATTTTCACCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CCA 72 bp AAAGCTTTACTTGGTTGTCAGGGTACTTCTTTGCATTaGTTTCTTCAAGAAAAGCTCGTGCATAGGCCATTG +
Preference number: 3 (lower is better)
Translates to: KALLGCQGTSLH*FLQEKLVHRPL
Trigger: CAATGGCCTATGCACGAGCTTTTCTTGAAGAAACCAATGCAAAGAAGTACCCTGACAACCAAGTAAAGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CAA 90 bp TTCCATTGTGCAAAGCTGATTAAGCTCAGAAACCTTCTTGGACATCTCGTCAATTCAAAGACAAGGGTCTaGGGATCTTTTCACAGTTGT +
Preference number: 3 (lower is better)
Translates to: FHCAKLIKLRNLLGHLVNSKTRV*GSFHSC
Trigger: ACAACTGTGAAAAGATCCCAAGACCCTTGTCTTTGA...ATTGACGAGATGTCCAAGAAGGTTTCTGAGCTTAATCAGCTTTGCACAATGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CAA 90 bp ATCTCTAGACCCCTGATTAGATGTATTGACAGTAAAAGGATACAGGTCCTTCAGATCTTTTGTGCATACTaGTTGGAGTCTGGGTTCTTA +
Preference number: 3 (lower is better)
Translates to: ISRPLIRCIDSKRIQVLQIFCAY*LESGFL
Trigger: TAAGAACCCAGACTCCAACAAGTATGCACAAAAGAT...CTGAAGGACCTGTATCCTTTTACTGTCAATACATCTAATCAGGGGTCTAGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CAA 90 bp ACACACATGTATAGCTGCTCCACCAGGATATTCTCATTGTATGGTGTATCTTGCTCCTCAGTTGAAATCTaGCTACTTTCTTGTCTAAAC +
Preference number: 3 (lower is better)
Translates to: THMYSCSTRIFSLYGVSCSSVEI*LLSCLN
Trigger: GTTTAGACAAGAAAGTAGCAAGATTTCAACTGAGGA...GCAAGATACACCATACAATGAGAATATCCTGGTGGAGCAGCTATACATGTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CAA 90 bp CATGCTGATGTAATTGTTGACCATCTTAAACACATACCCTCGGTCCATAAATGTACAAATGTCGACACTTaGAAAAGTGGTTTGCCACCA +
Preference number: 3 (lower is better)
Translates to: HADVIVDHLKHIPSVHKCTNVDT*KSGLPP
Trigger: TGGTGGCAAACCACTTTTCAAAGTGTCGACATTTGT...ACATTTATGGACCGAGGGTATGTGTTTAAGATGGTCAACAATTACATCAGCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR TCA 72 bp ACTGAATATTCAGGCATATCTGATGCATGTAACTCTTaGGTCGATTCTGAAGGTGTCAAAGGATCTGGAATG +
Preference number: 3 (lower is better)
Translates to: TEYSGISDACNS*VDSEGVKGSGM
Trigger: CATTCCAGATCCTTTGACACCTTCAGAATCGACTCAAGAGTTACATGCATCAGATATGCCTGAATATTCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CAA 90 bp TTCCATTGTGCAAAGCTGATTAAGCTCAGAAACCTTCTTGGACATCTCGTCAATCTGTTGTTGAGTCATTaGATTTCAAAAGACCAGTCA +
Preference number: 3 (lower is better)
Translates to: FHCAKLIKLRNLLGHLVNLLLSH*ISKDQS
Trigger: TGACTGGTCTTTTGAAATCAAATGACTCAACAACAG...ATTGACGAGATGTCCAAGAAGGTTTCTGAGCTTAATCAGCTTTGCACAATGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR-3UTR CAA 90 bp ATCTCTAGACCCCTGATTAGATGTATTGACAGTAAAAGGATACAGGTCCTTCAGCCGATTAAGAAGTGTTaGCGACAAAATTCATTTGTG +
Preference number: 3 (lower is better)
Translates to: ISRPLIRCIDSKRIQVLQPIKKC*RQNSFV
Trigger: CACAAATGAATTTTGTCGCAAACACTTCTTAATCGG...CTGAAGGACCTGTATCCTTTTACTGTCAATACATCTAATCAGGGGTCTAGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR TCA 72 bp CCTTGTATTTCCAAATCACATGGTCGGATAGGACCATaGCAAGATTGTCCAATTCATTTTGGTAAGATTCAG +
Preference number: 3 (lower is better)
Translates to: PCISKSHGRIGP*QDCPIHFGKIQ
Trigger: CTGAATCTTACCAAAATGAATTGGACAATCTTGTCATGGTCCTATCCGACCATGTGATTTGGAAATACAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR TCA 72 bp CTTATTATGTTGCGTTTTCCTAGGTATCTGAAATTTTaGAGACAAACGTCCAAGATGCTGAAGAAGTCGGAC +
Preference number: 3 (lower is better)
Translates to: LIMLRFPRYLKF*RQTSKMLKKSD
Trigger: GTCCGACTTCTTCAGCATCTTGGACGTTTGTCTTCAAAATTTCAGATACCTAGGAAAACGCAACATAATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR TCA 72 bp ATTTTTATATACTCTGTAAGGCCGACAATACTTTGTTaGATCGTAAACAAATTCTTCCACCTCCACTGTGGG +
Preference number: 3 (lower is better)
Translates to: IFIYSVRPTILC*IVNKFFHLHCG
Trigger: CCCACAGTGGAGGTGGAAGAATTTGTTTACGATTCAACAAAGTATTGTCGGCCTTACAGAGTATATAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR TCA 72 bp AAAGAGCATGTAGGTATCAAAGACCCTTTTCATCAATaGATTTTGACAGTCACATTGTTGGAGTTGTCTCTG +
Preference number: 3 (lower is better)
Translates to: KEHVGIKDPFHQ*ILTVTLLELSL
Trigger: CAGAGACAACTCCAACAATGTGACTGTCAAAATTCATTGATGAAAAGGGTCTTTGATACCTACATGCTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR GCA 72 bp TTGGATCCTTTGAGAGTTCCATTGTTCTGGGTGGACTaGACAAATTTAAATGCAGCAGCAATTTTTCTTATT +
Preference number: 3 (lower is better)
Translates to: LDPLRVPLFWVD*TNLNAAAIFLI
Trigger: AATAAGAAAAATTGCTGCTGCATTTAAATTTGTGCAGTCCACCCAGAACAATGGAACTCTCAAAGGATCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR TCA 72 bp AAATGCATTCACATGTGGATCCTGAGTATTTACTGTTaGTACAACAAATGTCGACACTTTGAAAAGTGGTTT +
Preference number: 3 (lower is better)
Translates to: KCIHMWILSIYC*YNKCRHFEKWF
Trigger: AAACCACTTTTCAAAGTGTCGACATTTGTTGTATCAACAGTAAATACTCAGGATCCACATGTGAATGCATTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp AGGAAGTTTGAGGAAGGATTGTTTTGCTGTAACGTGTGGCCGCCCCAGCCTCAGTCAACAGGCTCCGGGTaGACCTGCGGGTCCGCTCAC +
Preference number: 4 (lower is better)
Translates to: RKFEEGLFCCNVWPPQPQSTGSG*TCGSAH
Trigger: GTGAGCGGACCCGCAGGTTCACCCGGAGCCTGTTGA...CTGAGGCTGGGGCGGCCACACGTTACAGCAAAACAATCCTTCCTCAAACTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458608.1
3UTR CAA 72 bp GCTCCTCCTCCCTTGGAGGGGCCCCTCAGGACTGATTaGCAGAATGCGGTTGAGGGTGTGGATCCATTCATC +
Preference number: 4 (lower is better)
Translates to: APPPLEGPLRTD*QNAVEGVDPFI
Trigger: GATGAATGGATCCACACCCTCAACCGCATTCTGCAAATCAGTCCTGAGGGGCCCCTCCAAGGGAGGAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp GCCAGTTCCTCATGTACAGTCCTCTCCTTGCATGCCCTGGTCTTGAACACGAACGCTGAGGCTTCTGTCTaGGTTGACCGTGACCTGTGG +
Preference number: 4 (lower is better)
Translates to: ASSSCTVLSLHALVLNTNAEASV*VDRDLW
Trigger: CCACAGGTCACGGTCAACTCAGACAGAAGCCTCAGC...GTTCGTGTTCAAGACCAGGGCATGCAAGGAGAGGACTGTACATGAGGAACTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR GCA 90 bp GAGGTTGCTTTCGCGGAAGCATCTAGCATGATGCTCAAACAGGCATTAATTGCTCGGAGCTCGGCCGCCTaGCCAGGTCTCAACAGGCTC +
Preference number: 4 (lower is better)
Translates to: EVAFAEASSMMLKQALIARSSAA*PGLNRL
Trigger: GAGCCTGTTGAGACCTGGGCAGGCGGCCGAGCTCCG...AGCAATTAATGCCTGTTTGAGCATCATGCTAGATGCTTCCGCGAAAGCAACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458608.1
CDS-3UTR GCA 90 bp GTCAGGGTACTTCTTTGCATTGGTTTCTTCAAGAAAAGCTCGTGCATAGGCCATGTCCGCCGCTTGCACTaGTCCGCCACCCCACCGTGC +
Preference number: 4 (lower is better)
Translates to: VRVLLCIGFFKKSSCIGHVRRLH*SATPPC
Trigger: GCACGGTGGGGTGGCGGAGCAGTGCAAGCGGCGGAC...ATGGCCTATGCACGAGCTTTTCTTGAAGAAACCAATGCAAAGAAGTACCCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR GCA 90 bp TGTTTCCTCTGGCGTGCATTCACAAGTTACAGAATTATCCAGCGAATCCAGACCGGATCGTCCGCCGCTTaGACTGCTCCGCCACCCCAC +
Preference number: 4 (lower is better)
Translates to: CFLWRAFTSYRIIQRIQTGSSAA*TAPPPH
Trigger: GTGGGGTGGCGGAGCAGTGCAAGCGGCGGACGATCC...GGTCTGGATTCGCTGGATAATTCTGTAACTTGTGAATGCACGCCAGAGGAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp GCAGGAAGTTTGAGGAAGGATTGTTTTGCTGTAACGTGTGGCCGCCCCAGCCTCGTTTTCTGTGGTTTCTaGGCTCCTCGGCGTGAAGGG +
Preference number: 4 (lower is better)
Translates to: AGSLRKDCFAVTCGRPSLVFCGF*APRREG
Trigger: CCCTTCACGCCGAGGAGCCCAGAAACCACAGAAAAC...GAGGCTGGGGCGGCCACACGTTACAGCAAAACAATCCTTCCTCAAACTTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458608.1
3UTR CAA 72 bp GATGAGATGGAGACCGTGGGTAGGGCCGGAGTTGCTTaGCTAATTACTCGAGTGCAGGTTTGGTCCACTCCG +
Preference number: 4 (lower is better)
Translates to: DEMETVGRAGVA*LITRVQVWSTP
Trigger: CGGAGTGGACCAAACCTGCACTCGAGTAATTAGCAAAGCAACTCCGGCCCTACCCACGGTCTCCATCTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp GAGGTTGCTTTCGCGGAAGCATCTAGCATGATGCTCAAACAGGCATTAATTGCTCCGCCCCAGCCTCAGTaGGGTTGCTTTCGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: EVAFAEASSMMLKQALIAPPQPQ*GCFRGS
Trigger: GCTTCCGCGAAAGCAACCTCACTGAGGCTGGGGCGG...AGCAATTAATGCCTGTTTGAGCATCATGCTAGATGCTTCCGCGAAAGCAACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458608.1
CDS-3UTR GCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATGGATCGTCCGCCGCTTaGACTGCTCCGCCACCCCAC +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDGSSAA*TAPPPH
Trigger: GTGGGGTGGCGGAGCAGTGCAAGCGGCGGACGATCC...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp GGAAGTTTGAGGAAGGATTGTTTTGCTGTAACGTGTGGCCGCCCCAGCCTCAGTCCTCGGCGTGAAGGGTaGTGCAGGAAGTTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: GSLRKDCFAVTCGRPSLSPRREG*CRKFEE
Trigger: TTCCTCAAACTTCCTGCAGCACCCTTCACGCCGAGG...ACTGAGGCTGGGGCGGCCACACGTTACAGCAAAACAATCCTTCCTCAAACTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458608.1
CDS-3UTR CCA 90 bp TCAGATAAATCCTTGGCATATTGTCCAGGAGCATGCCGTACAGGGGCATGTATAGTGCTCCTCCTCCCTTaGAGGGGCCCCTCAGGACTG +
Preference number: 4 (lower is better)
Translates to: SDKSLAYCPGACRTGACIVLLLP*RGPSGL
Trigger: CAGTCCTGAGGGGCCCCTCCAAGGGAGGAGGAGCAC...TATACATGCCCCTGTACGGCATGCTCCTGGACAATATGCCAAGGATTTATCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp GCCAGTTCCTCATGTACAGTCCTCTCCTTGCATGCCCTGGTCTTGAACACGAACATGAGATGGAGACCGTaGGTAGGGCCGGAGTTGCTT +
Preference number: 4 (lower is better)
Translates to: ASSSCTVLSLHALVLNTNMRWRP*VGPELL
Trigger: AAGCAACTCCGGCCCTACCCACGGTCTCCATCTCAT...GTTCGTGTTCAAGACCAGGGCATGCAAGGAGAGGACTGTACATGAGGAACTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp GCCAGTTCCTCATGTACAGTCCTCTCCTTGCATGCCCTGGTCTTGAACACGAACGAAGCAGAACAATGCTaGCAGTGCAGCCCATCGCTG +
Preference number: 4 (lower is better)
Translates to: ASSSCTVLSLHALVLNTNEAEQC*QCSPSL
Trigger: CAGCGATGGGCTGCACTGCCAGCATTGTTCTGCTTC...GTTCGTGTTCAAGACCAGGGCATGCAAGGAGAGGACTGTACATGAGGAACTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTGCTGTGTAGGCGGCTaGGGTGAAGAGGGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDCCVGG*GEEGPS
Trigger: GGAGGGCCCCTCTTCACCTCAGCCGCCTACACAGCA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp GGTAAGATTCAGGAAATCTCTGAGGCCGGGGAAGCTGGATTTTATTTGTGTCAATGCTGTGTAGGCGGCTaGGGTGAAGAGGGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: GKIQEISEAGEAGFYLCQCCVGG*GEEGPS
Trigger: GGAGGGCCCCTCTTCACCTCAGCCGCCTACACAGCA...TTGACACAAATAAAATCCAGCTTCCCCGGCCTCAGAGATTTCCTGAATCTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATGTCCACTCCGCGCTTTaGCAGGTCGTCCCTGCCCGT +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDVHSAL*QVVPAR
Trigger: ACGGGCAGGGACGACCTGTCAAAGCGCGGAGTGGAC...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTCCGCCACCCCACCGTaGTTCTTGCCCGACAGCGTG +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDSATPP*FLPDSV
Trigger: CACGCTGTCGGGCAAGAAGCACGGTGGGGTGGCGGA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGTCCGCCGCTTGCACTaGTCCGCCACCCCACCGTGC +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGVRRLH*SATPPC
Trigger: GCACGGTGGGGTGGCGGAGCAGTGCAAGCGGCGGAC...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATGTGCTCCTCCTCCCTTaGAGGGGCCCCTCAGGACTG +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDVLLLP*RGPSGL
Trigger: CAGTCCTGAGGGGCCCCTCCAAGGGAGGAGGAGCAC...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
3UTR CAA 72 bp TGGAGGGGCCCCTCAGGACTGATTTGCAGAATGCGGTaGAGGGTGTGGATCCATTCATCCATATCTGACTCT +
Preference number: 4 (lower is better)
Translates to: WRGPSGLICRMR*RVWIHSSISDS
Trigger: AGAGTCAGATATGGATGAATGGATCCACACCCTCAACCGCATTCTGCAAATCAGTCCTGAGGGGCCCCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CAA 72 bp CCCGACAGCGTGAAGGGTGTCTCGAAGACAAAGCGGTaGATGTTGTGGTGCATTTCGAAATCTGTCTTCCGG +
Preference number: 4 (lower is better)
Translates to: PDSVKGVSKTKR*MLWCISKSVFR
Trigger: CCGGAAGACAGATTTCGAAATGCACCACAACATCAACCGCTTTGTCTTCGAGACACCCTTCACGCTGTCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR GCA 90 bp GCCAGTTCCTCATGTACAGTCCTCTCCTTGCATGCCCTGGTCTTGAACACGAACTGCGTAGTTCAGGAGTaGTTGCGTAGGAGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: ASSSCTVLSLHALVLNTNCVVQE*LRRSLP
Trigger: TGGCAAACTCCTACGCAAGCACTCCTGAACTACGCA...GTTCGTGTTCAAGACCAGGGCATGCAAGGAGAGGACTGTACATGAGGAACTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR GCA 90 bp ACACACATGTATAGCTGCTCCACCAGGATATTCTCATTGTATGGTGTATCTTGCTCCGCCACCCCACCGTaGTTCTTGCCCGACAGCGTG +
Preference number: 4 (lower is better)
Translates to: THMYSCSTRIFSLYGVSCSATPP*FLPDSV
Trigger: CACGCTGTCGGGCAAGAAGCACGGTGGGGTGGCGGA...GCAAGATACACCATACAATGAGAATATCCTGGTGGAGCAGCTATACATGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR GCA 90 bp GCCAGTTCCTCATGTACAGTCCTCTCCTTGCATGCCCTGGTCTTGAACACGAACTTCACGTCAAGGGCCTaGCCACATGCATCTGCAAAT +
Preference number: 4 (lower is better)
Translates to: ASSSCTVLSLHALVLNTNFTSRA*PHASAN
Trigger: ATTTGCAGATGCATGTGGGCAGGCCCTTGACGTGAA...GTTCGTGTTCAAGACCAGGGCATGCAAGGAGAGGACTGTACATGAGGAACTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATCGGACACCTCTGGGCTaGGAGCTCTCTGCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDRTPLG*ELSASR
Trigger: CCTACTGGCAGAGAGCTCCCAGCCCAGAGGTGTCCG...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp GCCAGTTCCTCATGTACAGTCCTCTCCTTGCATGCCCTGGTCTTGAACACGAACTGTGGACAGCTCCTCTaGACCACAGAACGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: ASSSCTVLSLHALVLNTNCGQLL*TTERKA
Trigger: AGCTTTTCGTTCTGTGGTCCAGAGGAGCTGTCCACA...GTTCGTGTTCAAGACCAGGGCATGCAAGGAGAGGACTGTACATGAGGAACTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTCAACAGGCTCCGGGTaGACCTGCGGGTCCGCTCAC +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGSTGSG*TCGSAH
Trigger: GTGAGCGGACCCGCAGGTTCACCCGGAGCCTGTTGA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258390.12
CDS-3UTR TCA 90 bp GCCAGTTCCTCATGTACAGTCCTCTCCTTGCATGCCCTGGTCTTGAACACGAACTTTGCAGAATGCGGTTaGGGGTGTGGATCCATTCAT +
Preference number: 4 (lower is better)
Translates to: ASSSCTVLSLHALVLNTNFAECG*GCGSIH
Trigger: ATGAATGGATCCACACCCTCAACCGCATTCTGCAAA...GTTCGTGTTCAAGACCAGGGCATGCAAGGAGAGGACTGTACATGAGGAACTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp GCCAGTTCCTCATGTACAGTCCTCTCCTTGCATGCCCTGGTCTTGAACACGAACCTCTTGAGTCGATTCTaGAGGTGTCAAAGGATCTGG +
Preference number: 4 (lower is better)
Translates to: ASSSCTVLSLHALVLNTNLLSRF*RCQRIW
Trigger: CCAGATCCTTTGACACCTTCAGAATCGACTCAAGAG...GTTCGTGTTCAAGACCAGGGCATGCAAGGAGAGGACTGTACATGAGGAACTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp CACCTCTGGGCTGGGAGCTCTCTGCCAGTAGGCAATCAGAGTCTCGTACGAAATGTGGGACCGGACAATTaGCTTCTGCTTGTTAAATTC +
Preference number: 4 (lower is better)
Translates to: HLWAGSSLPVGNQSLVRNVGPDN*LLLVKF
Trigger: GAATTTAACAAGCAGAAGTCAATTGTCCGGTCCCAC...ATTTCGTACGAGACTCTGATTGCCTACTGGCAGAGAGCTCCCAGCCCAGAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp GCCAGTTCCTCATGTACAGTCCTCTCCTTGCATGCCCTGGTCTTGAACACGAACTCTCCGTTTCTGGCATaGATCTTGGCCATACTTTCC +
Preference number: 4 (lower is better)
Translates to: ASSSCTVLSLHALVLNTNSPFLA*ILAILS
Trigger: GGAAAGTATGGCCAAGATTCATGCCAGAAACGGAGA...GTTCGTGTTCAAGACCAGGGCATGCAAGGAGAGGACTGTACATGAGGAACTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGTCCACTCCGCGCTTTaGCAGGTCGTCCCTGCCCGT +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGVHSAL*QVVPAR
Trigger: ACGGGCAGGGACGACCTGTCAAAGCGCGGAGTGGAC...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATGGCTTTTCTTGCCGCTaGTGCTGCCGGCTGCTGACT +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDGFSCR*CCRLLT
Trigger: AGTCAGCAGCCGGCAGCAGCAGCGGCAAGAAAAGCC...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258390.12
CDS-3UTR GCA 90 bp GCCAGTTCCTCATGTACAGTCCTCTCCTTGCATGCCCTGGTCTTGAACACGAACACATCTTGGTCTTCCTaGAGGGCAAAGCCAACTTCT +
Preference number: 4 (lower is better)
Translates to: ASSSCTVLSLHALVLNTNTSWSS*RAKPTS
Trigger: AGAAGTTGGCTTTGCCCTGCAGGAAGACCAAGATGT...GTTCGTGTTCAAGACCAGGGCATGCAAGGAGAGGACTGTACATGAGGAACTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR GCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTCCGCCACCCCACCGTaGTTCTTGCCCGACAGCGTG +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGSATPP*FLPDSV
Trigger: CACGCTGTCGGGCAAGAAGCACGGTGGGGTGGCGGA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCGTCCGCCGCTTGCACTaGTCCGCCACCCCACCGTGC +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTVRRLH*SATPPC
Trigger: GCACGGTGGGGTGGCGGAGCAGTGCAAGCGGCGGAC...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGTGCTCCTCCTCCCTTaGAGGGGCCCCTCAGGACTG +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGVLLLP*RGPSGL
Trigger: CAGTCCTGAGGGGCCCCTCCAAGGGAGGAGGAGCAC...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp CACCTCTGGGCTGGGAGCTCTCTGCCAGTAGGCAATCAGAGTCTCGTACGAAATAATCTGGCAACGCTGTaGTTTGCCCTTCTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: HLWAGSSLPVGNQSLVRNNLATL*FALLVS
Trigger: AGAAACAAGAAGGGCAAACCACAGCGTTGCCAGATT...ATTTCGTACGAGACTCTGATTGCCTACTGGCAGAGAGCTCCCAGCCCAGAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATGAAGTCGGACACCTCTaGGCTGGGAGCTCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDEVGHL*AGSSLP
Trigger: TGGCAGAGAGCTCCCAGCCCAGAGGTGTCCGACTTC...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp GTCAGGGTACTTCTTTGCATTGGTTTCTTCAAGAAAAGCTCGTGCATAGGCCATGAAGTCGGACACCTCTaGGCTGGGAGCTCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: VRVLLCIGFFKKSSCIGHEVGHL*AGSSLP
Trigger: TGGCAGAGAGCTCCCAGCCCAGAGGTGTCCGACTTC...ATGGCCTATGCACGAGCTTTTCTTGAAGAAACCAATGCAAAGAAGTACCCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp GCCAGTTCCTCATGTACAGTCCTCTCCTTGCATGCCCTGGTCTTGAACACGAACTGGGATGGTTCCTCTTaGCGTCGTCTACAAATGTGT +
Preference number: 4 (lower is better)
Translates to: ASSSCTVLSLHALVLNTNWDGSS*RRLQMC
Trigger: ACACATTTGTAGACGACGCCAAGAGGAACCATCCCA...GTTCGTGTTCAAGACCAGGGCATGCAAGGAGAGGACTGTACATGAGGAACTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CAA 72 bp TGTCCAGGAGCATGCCGTACAGGGGCATGTATAAACTaGCTATCTGGGCCTGCTTTCTTGGCTCTCTGTATC +
Preference number: 4 (lower is better)
Translates to: CPGACRTGACIN*LSGPAFLALCI
Trigger: GATACAGAGAGCCAAGAAAGCAGGCCCAGATAGCAAGTTTATACATGCCCCTGTACGGCATGCTCCTGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATAGAGCCAGCCGGACTTaGAAACACCAGTTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDRASRT*KHQFLP
Trigger: CGGGAGGAACTGGTGTTTTCAAGTCCGGCTGGCTCT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp GTCAGGGTACTTCTTTGCATTGGTTTCTTCAAGAAAAGCTCGTGCATAGGCCATAGAGCCAGCCGGACTTaGAAACACCAGTTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: VRVLLCIGFFKKSSCIGHRASRT*KHQFLP
Trigger: CGGGAGGAACTGGTGTTTTCAAGTCCGGCTGGCTCT...ATGGCCTATGCACGAGCTTTTCTTGAAGAAACCAATGCAAAGAAGTACCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp CACCTCTGGGCTGGGAGCTCTCTGCCAGTAGGCAATCAGAGTCTCGTACGAAATATCTGGAATGTTTGCTaGTCTTATGGGCAGACACAA +
Preference number: 4 (lower is better)
Translates to: HLWAGSSLPVGNQSLVRNIWNVC*SYGQTQ
Trigger: TTGTGTCTGCCCATAAGATCAGCAAACATTCCAGAT...ATTTCGTACGAGACTCTGATTGCCTACTGGCAGAGAGCTCCCAGCCCAGAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp CACCTCTGGGCTGGGAGCTCTCTGCCAGTAGGCAATCAGAGTCTCGTACGAAATTCCATTGTGCAAAGCTaGTTAAGCTCAGAAACCTTC +
Preference number: 4 (lower is better)
Translates to: HLWAGSSLPVGNQSLVRNSIVQS*LSSETF
Trigger: GAAGGTTTCTGAGCTTAATCAGCTTTGCACAATGGA...ATTTCGTACGAGACTCTGATTGCCTACTGGCAGAGAGCTCCCAGCCCAGAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR GCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCCGGAGCTCGGCCGCCTaGCCAGGTCTCAACAGGCTC +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTRSSAA*PGLNRL
Trigger: GAGCCTGTTGAGACCTGGGCAGGCGGCCGAGCTCCG...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258390.12
CDS-3UTR GCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCGGATCGTCCGCCGCTTaGACTGCTCCGCCACCCCAC +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTGSSAA*TAPPPH
Trigger: GTGGGGTGGCGGAGCAGTGCAAGCGGCGGACGATCC...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp GTCCGTCTTCTCACTGCTCTTCTCATTGGTACTTGGATTGGAGTCAAGACTTGCCTTGAAGCAGAACAATaGTGGCAGTGCAGCCCATCG +
Preference number: 4 (lower is better)
Translates to: VRLLTALLIGTWIGVKTCLEAEQ*WQCSPS
Trigger: CGATGGGCTGCACTGCCAGCATTGTTCTGCTTCAAG...GCAAGTCTTGACTCCAATCCAAGTACCAATGAGAAGAGCAGTGAGAAGACGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp ACTTTGTTGAATCGTAAACAAATTCTTCCACCTCCACTGTGGGTTCTGTTTGAGCGGACACCTCTGGGCTaGGAGCTCTCTGCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: TLLNRKQILPPPLWVLFERTPLG*ELSASR
Trigger: CCTACTGGCAGAGAGCTCCCAGCCCAGAGGTGTCCG...CTCAAACAGAACCCACAGTGGAGGTGGAAGAATTTGTTTACGATTCAACAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTCGGACACCTCTGGGCTaGGAGCTCTCTGCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGRTPLG*ELSASR
Trigger: CCTACTGGCAGAGAGCTCCCAGCCCAGAGGTGTCCG...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp GCCAGTTCCTCATGTACAGTCCTCTCCTTGCATGCCCTGGTCTTGAACACGAACTATGGCCTTCATGACTaGAAGTGGAGTGCATCCATT +
Preference number: 4 (lower is better)
Translates to: ASSSCTVLSLHALVLNTNYGLHD*KWSASI
Trigger: AATGGATGCACTCCACTTCCAGTCATGAAGGCCATA...GTTCGTGTTCAAGACCAGGGCATGCAAGGAGAGGACTGTACATGAGGAACTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp TGTTTCCTCTGGCGTGCATTCACAAGTTACAGAATTATCCAGCGAATCCAGACCTTGCTATCACAGGGGTaGGTATCCTCCGAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: CFLWRAFTSYRIIQRIQTLLSQG*VSSESR
Trigger: CCTGCTCTCGGAGGATACCCACCCCTGTGATAGCAA...GGTCTGGATTCGCTGGATAATTCTGTAACTTGTGAATGCACGCCAGAGGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp TCAGATAAATCCTTGGCATATTGTCCAGGAGCATGCCGTACAGGGGCATGTATATCCTGGTACTCCAGCTaGTCCTCTTTGATGAGGCGC +
Preference number: 4 (lower is better)
Translates to: SDKSLAYCPGACRTGACISWYSS*SSLMRR
Trigger: GCGCCTCATCAAAGAGGACCAGCTGGAGTACCAGGA...TATACATGCCCCTGTACGGCATGCTCCTGGACAATATGCCAAGGATTTATCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CAA 72 bp AGCGTGAAGGGTGTCTCGAAGACAAAGCGGTTGATGTaGTGGTGCATTTCGAAATCTGTCTTCCGGTCTTCG +
Preference number: 4 (lower is better)
Translates to: SVKGVSKTKRLM*WCISKSVFRSS
Trigger: CGAAGACCGGAAGACAGATTTCGAAATGCACCACAACATCAACCGCTTTGTCTTCGAGACACCCTTCACGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTGCTGTGTAGGCGGCTaGGGTGAAGAGGGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTCCVGG*GEEGPS
Trigger: GGAGGGCCCCTCTTCACCTCAGCCGCCTACACAGCA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATCTGTGGAGAGTTCGCTaGGCATGTCCTTGTAGTGGG +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDLWRVR*ACPCSG
Trigger: CCCACTACAAGGACATGCTCAGCGAACTCTCCACAG...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TATTTCCAAATCACATGGTCGGATAGGACCATGACAAGATTGTCCAATTCATTTGTCCACTCCGCGCTTTaGCAGGTCGTCCCTGCCCGT +
Preference number: 4 (lower is better)
Translates to: YFQITWSDRTMTRLSNSFVHSAL*QVVPAR
Trigger: ACGGGCAGGGACGACCTGTCAAAGCGCGGAGTGGAC...AAATGAATTGGACAATCTTGTCATGGTCCTATCCGACCATGTGATTTGGAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp CACCTCTGGGCTGGGAGCTCTCTGCCAGTAGGCAATCAGAGTCTCGTACGAAATATATTCAACCTGGCTTaGTCAACACTGCTCAAAGAA +
Preference number: 4 (lower is better)
Translates to: HLWAGSSLPVGNQSLVRNIFNLA*STLLKE
Trigger: TTCTTTGAGCAGTGTTGATCAAGCCAGGTTGAATAT...ATTTCGTACGAGACTCTGATTGCCTACTGGCAGAGAGCTCCCAGCCCAGAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR GCA 90 bp TGTTTCCTCTGGCGTGCATTCACAAGTTACAGAATTATCCAGCGAATCCAGACCGCTTGCGTAGGAGTTTaGCAGGCTGTACTGGAGATC +
Preference number: 4 (lower is better)
Translates to: CFLWRAFTSYRIIQRIQTACVGV*QAVLEI
Trigger: GATCTCCAGTACAGCCTGGCAAACTCCTACGCAAGC...GGTCTGGATTCGCTGGATAATTCTGTAACTTGTGAATGCACGCCAGAGGAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR GCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTCCGCCACCCCACCGTaGTTCTTGCCCGACAGCGTG +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTSATPP*FLPDSV
Trigger: CACGCTGTCGGGCAAGAAGCACGGTGGGGTGGCGGA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp GAGGTTGCTTTCGCGGAAGCATCTAGCATGATGCTCAAACAGGCATTAATTGCTGAGGAAGGATTGTTTTaGTGTAACGTGTGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: EVAFAEASSMMLKQALIAEEGLF*CNVWPP
Trigger: GGGCGGCCACACGTTACAGCAAAACAATCCTTCCTC...AGCAATTAATGCCTGTTTGAGCATCATGCTAGATGCTTCCGCGAAAGCAACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458608.1
CDS-3UTR CCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCGTGCTCCTCCTCCCTTaGAGGGGCCCCTCAGGACTG +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTVLLLP*RGPSGL
Trigger: CAGTCCTGAGGGGCCCCTCCAAGGGAGGAGGAGCAC...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp GCCAGTTCCTCATGTACAGTCCTCTCCTTGCATGCCCTGGTCTTGAACACGAACCGATGTTACACAATTTaGATGCTCCAAGGGAACGTT +
Preference number: 4 (lower is better)
Translates to: ASSSCTVLSLHALVLNTNRCYTI*MLQGNV
Trigger: AACGTTCCCTTGGAGCATCCAAATTGTGTAACATCG...GTTCGTGTTCAAGACCAGGGCATGCAAGGAGAGGACTGTACATGAGGAACTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTCCAGCTGCTCCTCATaGCACTTGGCCACAATGTCG +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDSSCSS*HLATMS
Trigger: CGACATTGTGGCCAAGTGCCATGAGGAGCAGCTGGA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp CACCTCTGGGCTGGGAGCTCTCTGCCAGTAGGCAATCAGAGTCTCGTACGAAATTATTTCCAAATCACATaGTCGGATAGGACCATGACA +
Preference number: 4 (lower is better)
Translates to: HLWAGSSLPVGNQSLVRNYFQIT*SDRTMT
Trigger: TGTCATGGTCCTATCCGACCATGTGATTTGGAAATA...ATTTCGTACGAGACTCTGATTGCCTACTGGCAGAGAGCTCCCAGCCCAGAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp GCCAGTTCCTCATGTACAGTCCTCTCCTTGCATGCCCTGGTCTTGAACACGAACCTTCTCATTGGTACTTaGATTGGAGTCAAGACTTGC +
Preference number: 4 (lower is better)
Translates to: ASSSCTVLSLHALVLNTNLLIGT*IGVKTC
Trigger: GCAAGTCTTGACTCCAATCCAAGTACCAATGAGAAG...GTTCGTGTTCAAGACCAGGGCATGCAAGGAGAGGACTGTACATGAGGAACTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp GTCCGTCTTCTCACTGCTCTTCTCATTGGTACTTGGATTGGAGTCAAGACTTGCTCGTGCATAGGCCATTaGCCCAGCATTAACCTTCAC +
Preference number: 4 (lower is better)
Translates to: VRLLTALLIGTWIGVKTCSCIGH*PSINLH
Trigger: GTGAAGGTTAATGCTGGGCCAATGGCCTATGCACGA...GCAAGTCTTGACTCCAATCCAAGTACCAATGAGAAGAGCAGTGAGAAGACGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTCCTGGTACTCCAGCTaGTCCTCTTTGATGAGGCGC +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDSWYSS*SSLMRR
Trigger: GCGCCTCATCAAAGAGGACCAGCTGGAGTACCAGGA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp CGCCCCAGCCTCAGTGAGGTTGCTTTCGCGGAAGCATCTAGCATGATGCTCAAACAGCATCGTTTTAATTaGTATGTTCACCCCAGAGAA +
Preference number: 4 (lower is better)
Translates to: RPSLSEVAFAEASSMMLKQHRFN*YVHPRE
Trigger: TTCTCTGGGGTGAACATACCAATTAAAACGATGCTG...TTTGAGCATCATGCTAGATGCTTCCGCGAAAGCAACCTCACTGAGGCTGGGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458608.1
CDS-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATGAAGCAGAACAATGCTaGCAGTGCAGCCCATCGCTG +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDEAEQC*QCSPSL
Trigger: CAGCGATGGGCTGCACTGCCAGCATTGTTCTGCTTC...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644695.1
ENST00000645028.1
3UTR CAA 72 bp CATTGTGACAAGAGACCTGATGTCTGGCAGGAAGGATaGGATCCTTTGAGAGTTCCATTGTTCTGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: HCDKRPDVWQEG*DPLRVPLFWVD
Trigger: GTCCACCCAGAACAATGGAACTCTCAAAGGATCCAATCCTTCCTGCCAGACATCAGGTCTCTTGTCACAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp TCAGATAAATCCTTGGCATATTGTCCAGGAGCATGCCGTACAGGGGCATGTATAGGAAACTGTGGCTGCTaGAAAGTCATCACTGGGGAA +
Preference number: 4 (lower is better)
Translates to: SDKSLAYCPGACRTGACIGNCGC*KVITGE
Trigger: TTCCCCAGTGATGACTTTTCAGCAGCCACAGTTTCC...TATACATGCCCCTGTACGGCATGCTCCTGGACAATATGCCAAGGATTTATCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp TGTTTCCTCTGGCGTGCATTCACAAGTTACAGAATTATCCAGCGAATCCAGACCTCTTCCTGCTGTCTCTaGGGTCATAAAGTGCCACAC +
Preference number: 4 (lower is better)
Translates to: CFLWRAFTSYRIIQRIQTSSCCL*GHKVPH
Trigger: GTGTGGCACTTTATGACCTCAGAGACAGCAGGAAGA...GGTCTGGATTCGCTGGATAATTCTGTAACTTGTGAATGCACGCCAGAGGAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp CACCTCTGGGCTGGGAGCTCTCTGCCAGTAGGCAATCAGAGTCTCGTACGAAATGACCCTTTTCATCAATaGATTTTGACAGTCACATTG +
Preference number: 4 (lower is better)
Translates to: HLWAGSSLPVGNQSLVRNDPFHQ*ILTVTL
Trigger: CAATGTGACTGTCAAAATTCATTGATGAAAAGGGTC...ATTTCGTACGAGACTCTGATTGCCTACTGGCAGAGAGCTCCCAGCCCAGAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGCTGAGGCTTCTGTCTaGGTTGACCGTGACCTGTGG +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGAEASV*VDRDLW
Trigger: CCACAGGTCACGGTCAACTCAGACAGAAGCCTCAGC...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATCCCTCAGGACTGATTTaGAGAATGCGGTTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDPSGLI*RMRLRV
Trigger: CACCCTCAACCGCATTCTGCAAATCAGTCCTGAGGG...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp GTCCGTCTTCTCACTGCTCTTCTCATTGGTACTTGGATTGGAGTCAAGACTTGCGGCAACGCTGTGGTTTaGCCTTCTTGTTTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: VRLLTALLIGTWIGVKTCGNAVV*PSCFFK
Trigger: CTTGAAGAAACAAGAAGGGCAAACCACAGCGTTGCC...GCAAGTCTTGACTCCAATCCAAGTACCAATGAGAAGAGCAGTGAGAAGACGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR GCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATAAGGAGGCAAACACATaGTTCAGCGCTGTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDKEANT*FSAVAD
Trigger: GTCAGCCACAGCGCTGAAGCATGTGTTTGCCTCCTT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATGCTTGCGTAGGAGTTTaGCAGGCTGTACTGGAGATC +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDACVGV*QAVLEI
Trigger: GATCTCCAGTACAGCCTGGCAAACTCCTACGCAAGC...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTTTCCAGCCAGGTCCTaGGTAGTTCAGGAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDFPARS*VVQECL
Trigger: CAAGCACTCCTGAACTACGCAGGACCTGGCTGGAAA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TGTTTCCTCTGGCGTGCATTCACAAGTTACAGAATTATCCAGCGAATCCAGACCTTCAAGAAAAGCTCGTaGATAGGCCATTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: CFLWRAFTSYRIIQRIQTFKKSS*IGHWPS
Trigger: GCTGGGCCAATGGCCTATGCACGAGCTTTTCTTGAA...GGTCTGGATTCGCTGGATAATTCTGTAACTTGTGAATGCACGCCAGAGGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR GCA 90 bp CGCCCCAGCCTCAGTGAGGTTGCTTTCGCGGAAGCATCTAGCATGATGCTCAAACAAACAGGCATTAATTaGTCAGTAATCTGTCACAAC +
Preference number: 4 (lower is better)
Translates to: RPSLSEVAFAEASSMMLKQTGIN*SVICHN
Trigger: GTTGTGACAGATTACTGAGCAATTAATGCCTGTTTG...TTTGAGCATCATGCTAGATGCTTCCGCGAAAGCAACCTCACTGAGGCTGGGGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458608.1
CDS-3UTR GCA 90 bp ACACACATGTATAGCTGCTCCACCAGGATATTCTCATTGTATGGTGTATCTTGCGAACAATGCTGGCAGTaGAGCCCATCGCTGCATCCT +
Preference number: 4 (lower is better)
Translates to: THMYSCSTRIFSLYGVSCEQCWQ*SPSLHP
Trigger: AGGATGCAGCGATGGGCTGCACTGCCAGCATTGTTC...GCAAGATACACCATACAATGAGAATATCCTGGTGGAGCAGCTATACATGTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp CACCTCTGGGCTGGGAGCTCTCTGCCAGTAGGCAATCAGAGTCTCGTACGAAATTTGTTGAAGCATTTCTaGCTATCATACTTGAGGTGT +
Preference number: 4 (lower is better)
Translates to: HLWAGSSLPVGNQSLVRNLLKHF*LSYLRC
Trigger: ACACCTCAAGTATGATAGCCAGAAATGCTTCAACAA...ATTTCGTACGAGACTCTGATTGCCTACTGGCAGAGAGCTCCCAGCCCAGAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATGCTCCTCATGGCACTTaGCCACAATGTCGGTCAGAA +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDAPHGT*PQCRSE
Trigger: TTCTGACCGACATTGTGGCCAAGTGCCATGAGGAGC...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp GGTAAGATTCAGGAAATCTCTGAGGCCGGGGAAGCTGGATTTTATTTGTGTCAAGCTCCTCATGGCACTTaGCCACAATGTCGGTCAGAA +
Preference number: 4 (lower is better)
Translates to: GKIQEISEAGEAGFYLCQAPHGT*PQCRSE
Trigger: TTCTGACCGACATTGTGGCCAAGTGCCATGAGGAGC...TTGACACAAATAAAATCCAGCTTCCCCGGCCTCAGAGATTTCCTGAATCTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp GTCCGTCTTCTCACTGCTCTTCTCATTGGTACTTGGATTGGAGTCAAGACTTGCGGATGTAGGCATATTTaGGGTCCAAATCCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: VRLLTALLIGTWIGVKTCGCRHI*GPNPWG
Trigger: ACCCCAAGGATTTGGACCCCAAATATGCCTACATCC...GCAAGTCTTGACTCCAATCCAAGTACCAATGAGAAGAGCAGTGAGAAGACGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATGACCTCAGTTCTTCCTaGTACTCCAGCTGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDDLSSS*YSSWSS
Trigger: AGAGGACCAGCTGGAGTACCAGGAAGAACTGAGGTC...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATGGAAACTGTGGCTGCTaGAAAGTCATCACTGGGGAA +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDGNCGC*KVITGE
Trigger: TTCCCCAGTGATGACTTTTCAGCAGCCACAGTTTCC...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTCTTCCTGCTGTCTCTaGGGTCATAAAGTGCCACAC +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDSSCCL*GHKVPH
Trigger: GTGTGGCACTTTATGACCTCAGAGACAGCAGGAAGA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATGAGAAATCCGGATTCTaGGAGTGGTGCAGAACTGCT +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDEKSGF*EWCRTA
Trigger: AGCAGTTCTGCACCACTCTCAGAATCCGGATTTCTC...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp GTCCGTCTTCTCACTGCTCTTCTCATTGGTACTTGGATTGGAGTCAAGACTTGCGATGCATGTAACTCTTaGGTCGATTCTGAAGGTGTC +
Preference number: 4 (lower is better)
Translates to: VRLLTALLIGTWIGVKTCDACNS*VDSEGV
Trigger: GACACCTTCAGAATCGACTCAAGAGTTACATGCATC...GCAAGTCTTGACTCCAATCCAAGTACCAATGAGAAGAGCAGTGAGAAGACGGAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATAGCGCTGTGGCTGACTaGTTGACTTGGAAAAAGAGC +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDSAVAD*LTWKKS
Trigger: GCTCTTTTTCCAAGTCAATCAGTCAGCCACAGCGCT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATGACTTCGTAACAGAATaGTCCACAGAGGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDDFVTE*STEVSR
Trigger: CCTGCTGACCTCTGTGGATCATTCTGTTACGAAGTC...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTCTTGCCCGACAGCGTaGAGGGTGTCTCGAAGACAA +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGSCPTA*RVSRRQ
Trigger: TTGTCTTCGAGACACCCTTCACGCTGTCGGGCAAGA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp ACTTTGTTGAATCGTAAACAAATTCTTCCACCTCCACTGTGGGTTCTGTTTGAGTCTTGCCCGACAGCGTaGAGGGTGTCTCGAAGACAA +
Preference number: 4 (lower is better)
Translates to: TLLNRKQILPPPLWVLFESCPTA*RVSRRQ
Trigger: TTGTCTTCGAGACACCCTTCACGCTGTCGGGCAAGA...CTCAAACAGAACCCACAGTGGAGGTGGAAGAATTTGTTTACGATTCAACAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTCTGTGGAGAGTTCGCTaGGCATGTCCTTGTAGTGGG +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGLWRVR*ACPCSG
Trigger: CCCACTACAAGGACATGCTCAGCGAACTCTCCACAG...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp GTCCGTCTTCTCACTGCTCTTCTCATTGGTACTTGGATTGGAGTCAAGACTTGCACAGAACGAAAAGCTTaGAGCAGAACAATGCTGGCA +
Preference number: 4 (lower is better)
Translates to: VRLLTALLIGTWIGVKTCTERKA*SRTMLA
Trigger: TGCCAGCATTGTTCTGCTTCAAGCTTTTCGTTCTGT...GCAAGTCTTGACTCCAATCCAAGTACCAATGAGAAGAGCAGTGAGAAGACGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR GCA 90 bp ACACACATGTATAGCTGCTCCACCAGGATATTCTCATTGTATGGTGTATCTTGCCCCTCAGGACTGATTTaGAGAATGCGGTTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: THMYSCSTRIFSLYGVSCPSGLI*RMRLRV
Trigger: CACCCTCAACCGCATTCTGCAAATCAGTCCTGAGGG...GCAAGATACACCATACAATGAGAATATCCTGGTGGAGCAGCTATACATGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR GCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATAGTCCTCTCCTTGCATaGCCTGGTCTTGAACACGAA +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDSPLLA*PGLEHE
Trigger: TTCGTGTTCAAGACCAGGGCATGCAAGGAGAGGACT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTGCGTAGTTCAGGAGTaGTTGCGTAGGAGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDCVVQE*LRRSLP
Trigger: TGGCAAACTCCTACGCAAGCACTCCTGAACTACGCA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp GAAGAATCTGTTTCCTCTGGCGTGCATTCACAAGTTACAGAATTATCCAGCGAAGCCCTGCCCATAAAATaGCACACGATAGTAGCGACC +
Preference number: 4 (lower is better)
Translates to: EESVSSGVHSQVTELSSEALPIK*HTIVAT
Trigger: GGTCGCTACTATCGTGTGGCATTTTATGGGCAGGGC...TTCGCTGGATAATTCTGTAACTTGTGAATGCACGCCAGAGGAAACAGATTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR GCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATAAGGGCCTGCCCACATaGATCTGCAAATTGCCTGAA +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDKGLPT*ICKLPE
Trigger: TTCAGGCAATTTGCAGATGCATGTGGGCAGGCCCTT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTTCACGTCAAGGGCCTaGCCACATGCATCTGCAAAT +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDFTSRA*PHASAN
Trigger: ATTTGCAGATGCATGTGGGCAGGCCCTTGACGTGAA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp GGTAAGATTCAGGAAATCTCTGAGGCCGGGGAAGCTGGATTTTATTTGTGTCAACCCTTGGAAGACGAGTaGGAAGTGGTATCTTCATCC +
Preference number: 4 (lower is better)
Translates to: GKIQEISEAGEAGFYLCQPLEDE*EVVSSS
Trigger: GGATGAAGATACCACTTCCCACTCGTCTTCCAAGGG...TTGACACAAATAAAATCCAGCTTCCCCGGCCTCAGAGATTTCCTGAATCTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATCCCTTGGAAGACGAGTaGGAAGTGGTATCTTCATCC +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDPLEDE*EVVSSS
Trigger: GGATGAAGATACCACTTCCCACTCGTCTTCCAAGGG...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTCCAGCTGCTCCTCATaGCACTTGGCCACAATGTCG +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGSSCSS*HLATMS
Trigger: CGACATTGTGGCCAAGTGCCATGAGGAGCAGCTGGA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATCTGGGCCTGCTTTCTTaGCTCTCTGTATCGATCATC +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDLGLLS*LSVSII
Trigger: GATGATCGATACAGAGAGCCAAGAAAGCAGGCCCAG...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCGAAGTCGGACACCTCTaGGCTGGGAGCTCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTEVGHL*AGSSLP
Trigger: TGGCAGAGAGCTCCCAGCCCAGAGGTGTCCGACTTC...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp GTCCGTCTTCTCACTGCTCTTCTCATTGGTACTTGGATTGGAGTCAAGACTTGCGCATCGGCTATTAACTaGCTCACAGCTTTGATGAGT +
Preference number: 4 (lower is better)
Translates to: VRLLTALLIGTWIGVKTCASAIN*LTALMS
Trigger: ACTCATCAAAGCTGTGAGCCAGTTAATAGCCGATGC...GCAAGTCTTGACTCCAATCCAAGTACCAATGAGAAGAGCAGTGAGAAGACGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTCGTGCATAGGCCATTaGCCCAGCATTAACCTTCAC +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDSCIGH*PSINLH
Trigger: GTGAAGGTTAATGCTGGGCCAATGGCCTATGCACGA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTCCTGGTACTCCAGCTaGTCCTCTTTGATGAGGCGC +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGSWYSS*SSLMRR
Trigger: GCGCCTCATCAAAGAGGACCAGCTGGAGTACCAGGA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTACTCGAGTGCAGGTTTaGTCCACTCCGCGCTTTGAC +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGTRVQV*STPRFD
Trigger: GTCAAAGCGCGGAGTGGACCAAACCTGCACTCGAGT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp ATCTCTAGACCCCTGATTAGATGTATTGACAGTAAAAGGATACAGGTCCTTCAGACTCGAGTGCAGGTTTaGTCCACTCCGCGCTTTGAC +
Preference number: 4 (lower is better)
Translates to: ISRPLIRCIDSKRIQVLQTRVQV*STPRFD
Trigger: GTCAAAGCGCGGAGTGGACCAAACCTGCACTCGAGT...CTGAAGGACCTGTATCCTTTTACTGTCAATACATCTAATCAGGGGTCTAGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTATGAGATGGAGACCGTaGGTAGGGCCGGAGTTGCTT +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGMRWRP*VGPELL
Trigger: AAGCAACTCCGGCCCTACCCACGGTCTCCATCTCAT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTCGTCTACAAATGTGTaGACAGCTCCTCTGGACCAC +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDSSTNV*TAPLDH
Trigger: GTGGTCCAGAGGAGCTGTCCACACATTTGTAGACGA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644695.1
ENST00000645028.1
3UTR CAA 72 bp GACGATGTTACACAATTTGGATGCTCCAAGGGAACGTaGTCAACAGCAATATCCAGGCTTCCAGGAATGGTC +
Preference number: 4 (lower is better)
Translates to: DDVTQFGCSKGT*STAISRLPGMV
Trigger: GACCATTCCTGGAAGCCTGGATATTGCTGTTGACAACGTTCCCTTGGAGCATCCAAATTGTGTAACATCGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCAGAGCCAGCCGGACTTaGAAACACCAGTTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTRASRT*KHQFLP
Trigger: CGGGAGGAACTGGTGTTTTCAAGTCCGGCTGGCTCT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTTTGCAGAATGCGGTTaGGGGTGTGGATCCATTCAT +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDFAECG*GCGSIH
Trigger: ATGAATGGATCCACACCCTCAACCGCATTCTGCAAA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTCCGTAACACATCCCTaGAGATTTGAGTTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDSVTHP*RFELRA
Trigger: AGCCCTCAACTCAAATCTTCAGGGATGTGTTACGGA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATCCAAGAGCATCTGTCTaGCAGCAGCATGGTTTAGAT +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDPRASV*QQHGLD
Trigger: ATCTAAACCATGCTGCTGTCAGACAGATGCTCTTGG...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATACTGTGGGTTCTGTTTaGGCCATCATGTTGAAAGGC +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDTVGSV*AIMLKG
Trigger: GCCTTTCAACATGATGGCTCAAACAGAACCCACAGT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp ATCTCTAGACCCCTGATTAGATGTATTGACAGTAAAAGGATACAGGTCCTTCAGGATTCAGGAAATCTCTaGGGCCGGGGAAGCTGGATT +
Preference number: 4 (lower is better)
Translates to: ISRPLIRCIDSKRIQVLQDSGNL*GRGSWI
Trigger: AATCCAGCTTCCCCGGCCTCAGAGATTTCCTGAATC...CTGAAGGACCTGTATCCTTTTACTGTCAATACATCTAATCAGGGGTCTAGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTCTGATGAGTCTGTGTaGAGAGGGATAACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDSDESV*RGITGP
Trigger: TGGACCTGTTATCCCTCTTCACACAGACTCATCAGA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp GGTAAGATTCAGGAAATCTCTGAGGCCGGGGAAGCTGGATTTTATTTGTGTCAATCTGATGAGTCTGTGTaGAGAGGGATAACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: GKIQEISEAGEAGFYLCQSDESV*RGITGP
Trigger: TGGACCTGTTATCCCTCTTCACACAGACTCATCAGA...TTGACACAAATAAAATCCAGCTTCCCCGGCCTCAGAGATTTCCTGAATCTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp ACACACATGTATAGCTGCTCCACCAGGATATTCTCATTGTATGGTGTATCTTGCAGCGCTGTGGCTGACTaGTTGACTTGGAAAAAGAGC +
Preference number: 4 (lower is better)
Translates to: THMYSCSTRIFSLYGVSCSAVAD*LTWKKS
Trigger: GCTCTTTTTCCAAGTCAATCAGTCAGCCACAGCGCT...GCAAGATACACCATACAATGAGAATATCCTGGTGGAGCAGCTATACATGTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATCTTCAGCGCTGTGGCTaGCTGATTGACTTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDLQRCG*LIDLEK
Trigger: TTTTTCCAAGTCAATCAGTCAGCCACAGCGCTGAAG...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCGCTGAGGCTTCTGTCTaGGTTGACCGTGACCTGTGG +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTAEASV*VDRDLW
Trigger: CCACAGGTCACGGTCAACTCAGACAGAAGCCTCAGC...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATATTGCAAGCGAATGTTaGAACCGAGAGCCTCCAATC +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDIASEC*NREPPI
Trigger: GATTGGAGGCTCTCGGTTTCAACATTCGCTTGCAAT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp GGTAAGATTCAGGAAATCTCTGAGGCCGGGGAAGCTGGATTTTATTTGTGTCAAATTGCAAGCGAATGTTaGAACCGAGAGCCTCCAATC +
Preference number: 4 (lower is better)
Translates to: GKIQEISEAGEAGFYLCQIASEC*NREPPI
Trigger: GATTGGAGGCTCTCGGTTTCAACATTCGCTTGCAAT...TTGACACAAATAAAATCCAGCTTCCCCGGCCTCAGAGATTTCCTGAATCTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATCGAAGACAAAGCGGTTaGTGTTGTGGTGCATTTCGA +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDRRQSG*CCGAFR
Trigger: TCGAAATGCACCACAACATCAACCGCTTTGTCTTCG...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATGAAGCGTCACCAGGCTaGACAAATCTTTCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDEASPG*TNLSSW
Trigger: CCAAGAAGAAAGATTTGTTCAGCCTGGTGACGCTTC...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409592.7
CDS-3UTR GCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATGGCAACGCTGTGGTTTaGCCTTCTTGTTTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDGNAVV*PSCFFK
Trigger: CTTGAAGAAACAAGAAGGGCAAACCACAGCGTTGCC...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATACATCTTGGTCTTCCTaGAGGGCAAAGCCAACTTCT +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDTSWSS*RAKPTS
Trigger: AGAAGTTGGCTTTGCCCTGCAGGAAGACCAAGATGT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTATTGTCCAGGAGCATaGCGTACAGGGGCATGTATA +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDYCPGA*RTGACI
Trigger: TATACATGCCCCTGTACGGCATGCTCCTGGACAATA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp ATCTCTAGACCCCTGATTAGATGTATTGACAGTAAAAGGATACAGGTCCTTCAGAAGGAGGCAAACACATaGTTCAGCGCTGTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: ISRPLIRCIDSKRIQVLQKEANT*FSAVAD
Trigger: GTCAGCCACAGCGCTGAAGCATGTGTTTGCCTCCTT...CTGAAGGACCTGTATCCTTTTACTGTCAATACATCTAATCAGGGGTCTAGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR GCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTAAGGAGGCAAACACATaGTTCAGCGCTGTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGKEANT*FSAVAD
Trigger: GTCAGCCACAGCGCTGAAGCATGTGTTTGCCTCCTT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp ACTTTGTTGAATCGTAAACAAATTCTTCCACCTCCACTGTGGGTTCTGTTTGAGTTTCCAGCCAGGTCCTaGGTAGTTCAGGAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: TLLNRKQILPPPLWVLFEFPARS*VVQECL
Trigger: CAAGCACTCCTGAACTACGCAGGACCTGGCTGGAAA...CTCAAACAGAACCCACAGTGGAGGTGGAAGAATTTGTTTACGATTCAACAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR GCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGCCCTGCCCATAAAATaGCACACGATAGTAGCGACC +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGALPIK*HTIVAT
Trigger: GGTCGCTACTATCGTGTGGCATTTTATGGGCAGGGC...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATCTGCCCACATGCATCTaGAAATTGCCTGAAGATCTC +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDLPTCI*KLPEDL
Trigger: GAGATCTTCAGGCAATTTGCAGATGCATGTGGGCAG...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp ATCTCTAGACCCCTGATTAGATGTATTGACAGTAAAAGGATACAGGTCCTTCAGAGTGCAGCCCATCGCTaGATCCTGGAGCCTACAAAA +
Preference number: 4 (lower is better)
Translates to: ISRPLIRCIDSKRIQVLQSAAHR*ILEPTK
Trigger: TTTTGTAGGCTCCAGGATGCAGCGATGGGCTGCACT...CTGAAGGACCTGTATCCTTTTACTGTCAATACATCTAATCAGGGGTCTAGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR GCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTCTTGAAGCAGAACAATaGTGGCAGTGCAGCCCATCG +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGLEAEQ*WQCSPS
Trigger: CGATGGGCTGCACTGCCAGCATTGTTCTGCTTCAAG...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp CATGCTGATGTAATTGTTGACCATCTTAAACACATACCCTCGGTCCATAAATGTTCCAGCTGCTCCTCATaGCACTTGGCCACAATGTCG +
Preference number: 4 (lower is better)
Translates to: HADVIVDHLKHIPSVHKCSSCSS*HLATMS
Trigger: CGACATTGTGGCCAAGTGCCATGAGGAGCAGCTGGA...ACATTTATGGACCGAGGGTATGTGTTTAAGATGGTCAACAATTACATCAGCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTTCTGGCATGAATCTTaGCCATACTTTCCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDFWHES*PYFPAR
Trigger: CCTGGCTGGAAAGTATGGCCAAGATTCATGCCAGAA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATGGATGTAGGCATATTTaGGGTCCAAATCCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDGCRHI*GPNPWG
Trigger: ACCCCAAGGATTTGGACCCCAAATATGCCTACATCC...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp GGAAGTTTGAGGAAGGATTGTTTTGCTGTAACGTGTGGCCGCCCCAGCCTCAGTTCTTTTAAGAAGTACTaGCTGCCAGTAGTTTTTCAT +
Preference number: 4 (lower is better)
Translates to: GSLRKDCFAVTCGRPSLSSFKKY*LPVVFH
Trigger: ATGAAAAACTACTGGCAGCCAGTACTTCTTAAAAGA...ACTGAGGCTGGGGCGGCCACACGTTACAGCAAAACAATCCTTCCTCAAACTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000458608.1
CDS-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATCCCATCGCTGCATCCTaGAGCCTACAAAATAACTTC +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDPIAAS*SLQNNF
Trigger: GAAGTTATTTTGTAGGCTCCAGGATGCAGCGATGGG...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTGGGATGGTTCCTCTTaGCGTCGTCTACAAATGTGT +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDWDGSS*RRLQMC
Trigger: ACACATTTGTAGACGACGCCAAGAGGAACCATCCCA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644695.1
ENST00000645028.1
3UTR CAA 72 bp GCATATCCAACTGACGTTTCCAGAGCCTCCTTCTTTTaGGCATTAGCTTTTGCATTGATGTCACAGGTGACG +
Preference number: 4 (lower is better)
Translates to: AYPTDVSRASFF*ALAFALMSQVT
Trigger: CGTCACCTGTGACATCAATGCAAAAGCTAATGCCAAAAAGAAGGAGGCTCTGGAAACGTCAGTTGGATATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CAA 72 bp TCCGTCTTCTCACTGCTCTTCTCATTGGTACTTGGATaGGAGTCAAGACTTGCTAAAGATGCTCTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: SVFSLLFSLVLG*ESRLAKDALES
Trigger: TGACTCCAGAGCATCTTTAGCAAGTCTTGACTCCAATCCAAGTACCAATGAGAAGAGCAGTGAGAAGACGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGAAACTGTGGCTGCTaGAAAGTCATCACTGGGGAA +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGGNCGC*KVITGE
Trigger: TTCCCCAGTGATGACTTTTCAGCAGCCACAGTTTCC...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp GAAGAATCTGTTTCCTCTGGCGTGCATTCACAAGTTACAGAATTATCCAGCGAACCATTCATCCATATCTaGCTCTGTTTCAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: EESVSSGVHSQVTELSSEPFIHI*LCFSCQ
Trigger: CTGGCAGCTGAAACAGAGTCAGATATGGATGAATGG...TTCGCTGGATAATTCTGTAACTTGTGAATGCACGCCAGAGGAAACAGATTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGAGAAATCCGGATTCTaGGAGTGGTGCAGAACTGCT +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGEKSGF*EWCRTA
Trigger: AGCAGTTCTGCACCACTCTCAGAATCCGGATTTCTC...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTATGACTGGACAGAATaGTCCAGCTGCTCCTCATGG +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGYDWTE*SSCSSW
Trigger: CCATGAGGAGCAGCTGGATCATTCTGTCCAGTCATA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATGGTCGGATAGGACCATaGCAAGATTGTCCAATTCAT +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDGRIGP*QDCPIH
Trigger: ATGAATTGGACAATCTTGTCATGGTCCTATCCGACC...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATGATGCATGTAACTCTTaGGTCGATTCTGAAGGTGTC +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDDACNS*VDSEGV
Trigger: GACACCTTCAGAATCGACTCAAGAGTTACATGCATC...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATCTAAAGCTAAGTGTCTaGCATCTTGGTCTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDLKLSV*HLGLPA
Trigger: TGCAGGAAGACCAAGATGTCAGACACTTAGCTTTAG...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp GTCCGTCTTCTCACTGCTCTTCTCATTGGTACTTGGATTGGAGTCAAGACTTGCTCATCTCTAGACCCCTaGTTAGATGTATTGACAGTA +
Preference number: 4 (lower is better)
Translates to: VRLLTALLIGTWIGVKTCSSLDP*LDVLTV
Trigger: TACTGTCAATACATCTAATCAGGGGTCTAGAGATGA...GCAAGTCTTGACTCCAATCCAAGTACCAATGAGAAGAGCAGTGAGAAGACGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATATAGCTGTCTGGCTTTaGAATCCTCCATTGGTGCTT +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDIAVWL*NPPLVL
Trigger: AAGCACCAATGGAGGATTTCAAAGCCAGACAGCTAT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTAAACGTCCAAGATGCTaGAGAAGTCGGACACCTCTG +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGKRPRC*RSRTPL
Trigger: CAGAGGTGTCCGACTTCTTCAGCATCTTGGACGTTT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATAAGGATTGGATCCTTTaGGAGTTCCATTGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDKDWIL*EFHCSG
Trigger: CCCAGAACAATGGAACTCTCAAAGGATCCAATCCTT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATGCCTCAGTGTCTACATaGTGCACGATGTCTATTTCA +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDASVST*CTMSIS
Trigger: TGAAATAGACATCGTGCATCATGTAGACACTGAGGC...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTAGCGCTGTGGCTGACTaGTTGACTTGGAAAAAGAGC +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGSAVAD*LTWKKS
Trigger: GCTCTTTTTCCAAGTCAATCAGTCAGCCACAGCGCT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTCTTGCCCGACAGCGTaGAGGGTGTCTCGAAGACAA +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTSCPTA*RVSRRQ
Trigger: TTGTCTTCGAGACACCCTTCACGCTGTCGGGCAAGA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCCTGTGGAGAGTTCGCTaGGCATGTCCTTGTAGTGGG +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTLWRVR*ACPCSG
Trigger: CCCACTACAAGGACATGCTCAGCGAACTCTCCACAG...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TCAGATAAATCCTTGGCATATTGTCCAGGAGCATGCCGTACAGGGGCATGTATACTTAGGGTTTGCATTTaGGCTACACATTCACTGGAA +
Preference number: 4 (lower is better)
Translates to: SDKSLAYCPGACRTGACILRVCI*ATHSLE
Trigger: TTCCAGTGAATGTGTAGCTCAAATGCAAACCCTAAG...TATACATGCCCCTGTACGGCATGCTCCTGGACAATATGCCAAGGATTTATCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATACAGAACGAAAAGCTTaGAGCAGAACAATGCTGGCA +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDTERKA*SRTMLA
Trigger: TGCCAGCATTGTTCTGCTTCAAGCTTTTCGTTCTGT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp GCACACAGTTATATTCCGTGCCTTGTTGAAGCATTTCTGGCTATCATACTTGAGCTGTTGAGTACAACGTaGGGATATCCCAGGAAACTG +
Preference number: 4 (lower is better)
Translates to: AHSYIPCLVEAFLAIILELLSTT*GYPRKL
Trigger: CAGTTTCCTGGGATATCCGCACGTTGTACTCAACAG...CTCAAGTATGATAGCCAGAAATGCTTCAACAAGGCACGGAATATAACTGTGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR GCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATGAATGGTCTGCATTTTaGTTATTCTGTCGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDEWSAF*LFCRPF
Trigger: GAAGGGCCGACAGAATAAGCAAAATGCAGACCATTC...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATAGGAGGCAGACTTGTTaGTATTGGGATGTTGTACTC +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDRRQTC*YWDVVL
Trigger: GAGTACAACATCCCAATAGCAACAAGTCTGCCTCCT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp GTCAGGGTACTTCTTTGCATTGGTTTCTTCAAGAAAAGCTCGTGCATAGGCCATAGGAGGCAGACTTGTTaGTATTGGGATGTTGTACTC +
Preference number: 4 (lower is better)
Translates to: VRVLLCIGFFKKSSCIGHRRQTC*YWDVVL
Trigger: GAGTACAACATCCCAATAGCAACAAGTCTGCCTCCT...ATGGCCTATGCACGAGCTTTTCTTGAAGAAACCAATGCAAAGAAGTACCCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR GCA 90 bp ACACACATGTATAGCTGCTCCACCAGGATATTCTCATTGTATGGTGTATCTTGCTATTGTCCAGGAGCATaGCGTACAGGGGCATGTATA +
Preference number: 4 (lower is better)
Translates to: THMYSCSTRIFSLYGVSCYCPGA*RTGACI
Trigger: TATACATGCCCCTGTACGGCATGCTCCTGGACAATA...GCAAGATACACCATACAATGAGAATATCCTGGTGGAGCAGCTATACATGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR GCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATCAGGTCCTTCACCTCTaGTGGGAAATTGCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDQVLHL*WEIAVF
Trigger: AAAAACAGCAATTTCCCAGCAGAGGTGAAGGACCTG...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTTCAAGAAAAGCTCGTaGATAGGCCATTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGFKKSS*IGHWPS
Trigger: GCTGGGCCAATGGCCTATGCACGAGCTTTTCTTGAA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTAAGGGCCTGCCCACATaGATCTGCAAATTGCCTGAA +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGKGLPT*ICKLPE
Trigger: TTCAGGCAATTTGCAGATGCATGTGGGCAGGCCCTT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTTCACGTCAAGGGCCTaGCCACATGCATCTGCAAAT +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGFTSRA*PHASAN
Trigger: ATTTGCAGATGCATGTGGGCAGGCCCTTGACGTGAA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCGAACAATGCTGGCAGTaGAGCCCATCGCTGCATCCT +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTEQCWQ*SPSLHP
Trigger: AGGATGCAGCGATGGGCTGCACTGCCAGCATTGTTC...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTCCCTTGGAAGACGAGTaGGAAGTGGTATCTTCATCC +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGPLEDE*EVVSSS
Trigger: GGATGAAGATACCACTTCCCACTCGTCTTCCAAGGG...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATATGCGGTTGAGGGTGTaGATCCATTCATCCATATCT +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDMRLRV*IHSSIS
Trigger: AGATATGGATGAATGGATCCACACCCTCAACCGCAT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTCCAGCTGCTCCTCATaGCACTTGGCCACAATGTCG +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTSSCSS*HLATMS
Trigger: CGACATTGTGGCCAAGTGCCATGAGGAGCAGCTGGA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp ACTTTGTTGAATCGTAAACAAATTCTTCCACCTCCACTGTGGGTTCTGTTTGAGCTGGGCCTGCTTTCTTaGCTCTCTGTATCGATCATC +
Preference number: 4 (lower is better)
Translates to: TLLNRKQILPPPLWVLFELGLLS*LSVSII
Trigger: GATGATCGATACAGAGAGCCAAGAAAGCAGGCCCAG...CTCAAACAGAACCCACAGTGGAGGTGGAAGAATTTGTTTACGATTCAACAAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp TGTTTCCTCTGGCGTGCATTCACAAGTTACAGAATTATCCAGCGAATCCAGACCTTGCTAAAGATGCTCTaGAGTCAGCATGGTTTACTG +
Preference number: 4 (lower is better)
Translates to: CFLWRAFTSYRIIQRIQTLLKML*SQHGLL
Trigger: CAGTAAACCATGCTGACTCCAGAGCATCTTTAGCAA...GGTCTGGATTCGCTGGATAATTCTGTAACTTGTGAATGCACGCCAGAGGAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTATGGCCTTCATGACTaGAAGTGGAGTGCATCCATT +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDYGLHD*KWSASI
Trigger: AATGGATGCACTCCACTTCCAGTCATGAAGGCCATA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TGTTTCCTCTGGCGTGCATTCACAAGTTACAGAATTATCCAGCGAATCCAGACCTTGATGAGTTGTAAGTaGGACCGGACAATTGACTTC +
Preference number: 4 (lower is better)
Translates to: CFLWRAFTSYRIIQRIQTLMSCK*DRTIDF
Trigger: GAAGTCAATTGTCCGGTCCCACTTACAACTCATCAA...GGTCTGGATTCGCTGGATAATTCTGTAACTTGTGAATGCACGCCAGAGGAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATCCTTCATCTGAGCTGTaGCCATCAAAACAGTCCTTA +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDPSSEL*PSKQSL
Trigger: TAAGGACTGTTTTGATGGCCACAGCTCAGATGAAGG...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTTGCTATCACAGGGGTaGGTATCCTCCGAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTLLSQG*VSSESR
Trigger: CCTGCTCTCGGAGGATACCCACCCCTGTGATAGCAA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TCAGATAAATCCTTGGCATATTGTCCAGGAGCATGCCGTACAGGGGCATGTATAAGCTTGAGTAATCTTTaGGAAATCTCGGACAGACCT +
Preference number: 4 (lower is better)
Translates to: SDKSLAYCPGACRTGACISLSNL*EISDRP
Trigger: AGGTCTGTCCGAGATTTCCCAAAGATTACTCAAGCT...TATACATGCCCCTGTACGGCATGCTCCTGGACAATATGCCAAGGATTTATCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTCGTGCATAGGCCATTaGCCCAGCATTAACCTTCAC +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGSCIGH*PSINLH
Trigger: GTGAAGGTTAATGCTGGGCCAATGGCCTATGCACGA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTCCTGGTACTCCAGCTaGTCCTCTTTGATGAGGCGC +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTSWYSS*SSLMRR
Trigger: GCGCCTCATCAAAGAGGACCAGCTGGAGTACCAGGA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp CATGCTGATGTAATTGTTGACCATCTTAAACACATACCCTCGGTCCATAAATGTGACCTCAGTTCTTCCTaGTACTCCAGCTGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: HADVIVDHLKHIPSVHKCDLSSS*YSSWSS
Trigger: AGAGGACCAGCTGGAGTACCAGGAAGAACTGAGGTC...ACATTTATGGACCGAGGGTATGTGTTTAAGATGGTCAACAATTACATCAGCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCACTCGAGTGCAGGTTTaGTCCACTCCGCGCTTTGAC +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTTRVQV*STPRFD
Trigger: GTCAAAGCGCGGAGTGGACCAAACCTGCACTCGAGT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCATGAGATGGAGACCGTaGGTAGGGCCGGAGTTGCTT +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTMRWRP*VGPELL
Trigger: AAGCAACTCCGGCCCTACCCACGGTCTCCATCTCAT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TCAGATAAATCCTTGGCATATTGTCCAGGAGCATGCCGTACAGGGGCATGTATAGGCAAATATTCAACCTaGCTTGATCAACACTGCTCA +
Preference number: 4 (lower is better)
Translates to: SDKSLAYCPGACRTGACIGKYST*LDQHCS
Trigger: TGAGCAGTGTTGATCAAGCCAGGTTGAATATTTGCC...TATACATGCCCCTGTACGGCATGCTCCTGGACAATATGCCAAGGATTTATCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTGTGGACAGCTCCTCTaGACCACAGAACGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGCGQLL*TTERKA
Trigger: AGCTTTTCGTTCTGTGGTCCAGAGGAGCTGTCCACA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTCGTCTACAAATGTGTaGACAGCTCCTCTGGACCAC +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGSSTNV*TAPLDH
Trigger: GTGGTCCAGAGGAGCTGTCCACACATTTGTAGACGA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644695.1
ENST00000645028.1
3UTR CAA 72 bp AGGAGGCAGACTTGTTGCTATTGGGATGTTGTACTCTaGAGAAGCTATCTGATCGTGTTTCATCAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: RRQTCCYWDVVL*RSYLIVFHQRK
Trigger: CTTCCTCTGATGAAACACGATCAGATAGCTTCTCAAGAGTACAACATCCCAATAGCAACAAGTCTGCCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CAA 72 bp TGCTCTTCTCATTGGTACTTGGATTGGAGTCAAGACTaGCTAAAGATGCTCTGGAGTCAGCATGGTTTACTG +
Preference number: 4 (lower is better)
Translates to: CSSHWYLDWSQD*LKMLWSQHGLL
Trigger: CAGTAAACCATGCTGACTCCAGAGCATCTTTAGCAAGTCTTGACTCCAATCCAAGTACCAATGAGAAGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTCCATTCATCCATATCTaGCTCTGTTTCAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGPFIHI*LCFSCQ
Trigger: CTGGCAGCTGAAACAGAGTCAGATATGGATGAATGG...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATACATCCCTGAAGATTTaGGTTGAGGGCTTTACAGAT +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDTSLKI*VEGFTD
Trigger: ATCTGTAAAGCCCTCAACTCAAATCTTCAGGGATGT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTCCGTAACACATCCCTaGAGATTTGAGTTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGSVTHP*RFELRA
Trigger: AGCCCTCAACTCAAATCTTCAGGGATGTGTTACGGA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTCTGATTGTCTTGGAGTaGTGGTGTCGATGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGLIVLE*WCRCCH
Trigger: ATGGCAACATCGACACCATCACTCCAAGACAATCAG...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp ACTTTGTTGAATCGTAAACAAATTCTTCCACCTCCACTGTGGGTTCTGTTTGAGCTGATTGTCTTGGAGTaGTGGTGTCGATGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: TLLNRKQILPPPLWVLFELIVLE*WCRCCH
Trigger: ATGGCAACATCGACACCATCACTCCAAGACAATCAG...CTCAAACAGAACCCACAGTGGAGGTGGAAGAATTTGTTTACGATTCAACAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTCCTCTGGAAGTCCCTTaGTGTGAGGTTCTTCTGATT +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGPLEVP*CEVLLI
Trigger: AATCAGAAGAACCTCACATCAAGGGACTTCCAGAGG...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTACTGTGGGTTCTGTTTaGGCCATCATGTTGAAAGGC +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGTVGSV*AIMLKG
Trigger: GCCTTTCAACATGATGGCTCAAACAGAACCCACAGT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTATTCCGTGCCTTGTTaGAGCATTTCTGGCTATCAT +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDYSVPC*SISGYH
Trigger: ATGATAGCCAGAAATGCTTCAACAAGGCACGGAATA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TCAGATAAATCCTTGGCATATTGTCCAGGAGCATGCCGTACAGGGGCATGTATAAATTTTCACCTCATCTaGGAAATCCGGATTCTGAGA +
Preference number: 4 (lower is better)
Translates to: SDKSLAYCPGACRTGACINFHLI*EIRILR
Trigger: TCTCAGAATCCGGATTTCTCAGATGAGGTGAAAATT...TATACATGCCCCTGTACGGCATGCTCCTGGACAATATGCCAAGGATTTATCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATCAAATGTCGACACTTTaGAAAGTGGTTTGCCACCAT +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDQMSTL*KVVCHH
Trigger: ATGGTGGCAAACCACTTTTCAAAGTGTCGACATTTG...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCGATTCAGGAAATCTCTaGGGCCGGGGAAGCTGGATT +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTDSGNL*GRGSWI
Trigger: AATCCAGCTTCCCCGGCCTCAGAGATTTCCTGAATC...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATATCTGGAATGTTTGCTaGTCTTATGGGCAGACACAA +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDIWNVC*SYGQTQ
Trigger: TTGTGTCTGCCCATAAGATCAGCAAACATTCCAGAT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATCTCCTGGTTTCTGCTTaGTCTAACTTGTCAAATCGA +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDLLVSA*SNLSNR
Trigger: TCGATTTGACAAGTTAGATCAAGCAGAAACCAGGAG...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp ACACACATGTATAGCTGCTCCACCAGGATATTCTCATTGTATGGTGTATCTTGCGCCTCAGTGTCTACATaGTGCACGATGTCTATTTCA +
Preference number: 4 (lower is better)
Translates to: THMYSCSTRIFSLYGVSCASVST*CTMSIS
Trigger: TGAAATAGACATCGTGCATCATGTAGACACTGAGGC...GCAAGATACACCATACAATGAGAATATCCTGGTGGAGCAGCTATACATGTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTCTGATGAGTCTGTGTaGAGAGGGATAACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGSDESV*RGITGP
Trigger: TGGACCTGTTATCCCTCTTCACACAGACTCATCAGA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTCTTCAGCGCTGTGGCTaGCTGATTGACTTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGLQRCG*LIDLEK
Trigger: TTTTTCCAAGTCAATCAGTCAGCCACAGCGCTGAAG...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATCCCTTGAAAGAACGCTaGAGGAAACTTGCATACAAA +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDPLKER*RKLAYK
Trigger: TTTGTATGCAAGTTTCCTTCAGCGTTCTTTCAAGGG...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp CATGCTGATGTAATTGTTGACCATCTTAAACACATACCCTCGGTCCATAAATGTGACTTCGTAACAGAATaGTCCACAGAGGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: HADVIVDHLKHIPSVHKCDFVTE*STEVSR
Trigger: CCTGCTGACCTCTGTGGATCATTCTGTTACGAAGTC...ACATTTATGGACCGAGGGTATGTGTTTAAGATGGTCAACAATTACATCAGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTCAGATACTCTGCAATaGGAGCAGCAATATGGATGT +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDSDTLQ*EQQYGC
Trigger: ACATCCATATTGCTGCTCTCATTGCAGAGTATCTGA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp ACTTTGTTGAATCGTAAACAAATTCTTCCACCTCCACTGTGGGTTCTGTTTGAGCGAAGACAAAGCGGTTaGTGTTGTGGTGCATTTCGA +
Preference number: 4 (lower is better)
Translates to: TLLNRKQILPPPLWVLFERRQSG*CCGAFR
Trigger: TCGAAATGCACCACAACATCAACCGCTTTGTCTTCG...CTCAAACAGAACCCACAGTGGAGGTGGAAGAATTTGTTTACGATTCAACAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTCCATTGTGCAAAGCTaGTTAAGCTCAGAAACCTTC +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDSIVQS*LSSETF
Trigger: GAAGGTTTCTGAGCTTAATCAGCTTTGCACAATGGA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCCCCTCAGGACTGATTTaGAGAATGCGGTTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTPSGLI*RMRLRV
Trigger: CACCCTCAACCGCATTCTGCAAATCAGTCCTGAGGG...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATCTGTTTCCTCTGGCGTaGATTCACAAGTTACAGAAT +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDLFPLA*IHKLQN
Trigger: ATTCTGTAACTTGTGAATGCACGCCAGAGGAAACAG...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATGTTACACAATTTGGATaGTCCAAGGGAACGTTGTCA +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDVTQFG*SKGTLS
Trigger: TGACAACGTTCCCTTGGAGCATCCAAATTGTGTAAC...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp CATGCTGATGTAATTGTTGACCATCTTAAACACATACCCTCGGTCCATAAATGTAGTCCTCTCCTTGCATaGCCTGGTCTTGAACACGAA +
Preference number: 4 (lower is better)
Translates to: HADVIVDHLKHIPSVHKCSPLLA*PGLEHE
Trigger: TTCGTGTTCAAGACCAGGGCATGCAAGGAGAGGACT...ACATTTATGGACCGAGGGTATGTGTTTAAGATGGTCAACAATTACATCAGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR GCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTACATCTTGGTCTTCCTaGAGGGCAAAGCCAACTTCT +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGTSWSS*RAKPTS
Trigger: AGAAGTTGGCTTTGCCCTGCAGGAAGACCAAGATGT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCAAGGAGGCAAACACATaGTTCAGCGCTGTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTKEANT*FSAVAD
Trigger: GTCAGCCACAGCGCTGAAGCATGTGTTTGCCTCCTT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp GAAGAATCTGTTTCCTCTGGCGTGCATTCACAAGTTACAGAATTATCCAGCGAACAGGTCCTTCACCTCTaGTGGGAAATTGCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: EESVSSGVHSQVTELSSEQVLHL*WEIAVF
Trigger: AAAAACAGCAATTTCCCAGCAGAGGTGAAGGACCTG...TTCGCTGGATAATTCTGTAACTTGTGAATGCACGCCAGAGGAAACAGATTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR GCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCGCTTGCGTAGGAGTTTaGCAGGCTGTACTGGAGATC +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTACVGV*QAVLEI
Trigger: GATCTCCAGTACAGCCTGGCAAACTCCTACGCAAGC...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp GTCCGTCTTCTCACTGCTCTTCTCATTGGTACTTGGATTGGAGTCAAGACTTGCTCTTTTCAGATACTCTaGAATGAGAGCAGCAATATG +
Preference number: 4 (lower is better)
Translates to: VRLLTALLIGTWIGVKTCSFQIL*NESSNM
Trigger: CATATTGCTGCTCTCATTGCAGAGTATCTGAAAAGA...GCAAGTCTTGACTCCAATCCAAGTACCAATGAGAAGAGCAGTGAGAAGACGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR GCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATACACACATGTATAGCTaGTCCACCAGGATATTCTCA +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDTHMYS*STRIFS
Trigger: TGAGAATATCCTGGTGGAGCAGCTATACATGTGTGT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCGCCCTGCCCATAAAATaGCACACGATAGTAGCGACC +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTALPIK*HTIVAT
Trigger: GGTCGCTACTATCGTGTGGCATTTTATGGGCAGGGC...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATCGGTTGATGTTGTGGTaGATTTCGAAATCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDRLMLW*ISKSVF
Trigger: GAAGACAGATTTCGAAATGCACCACAACATCAACCG...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTCTGCCCACATGCATCTaGAAATTGCCTGAAGATCTC +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGLPTCI*KLPEDL
Trigger: GAGATCTTCAGGCAATTTGCAGATGCATGTGGGCAG...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCAGTGCAGCCCATCGCTaGATCCTGGAGCCTACAAAA +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTSAAHR*ILEPTK
Trigger: TTTTGTAGGCTCCAGGATGCAGCGATGGGCTGCACT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TCAGATAAATCCTTGGCATATTGTCCAGGAGCATGCCGTACAGGGGCATGTATACTGAAAAGTCATCACTaGGGAAGAACAAGAGATCTT +
Preference number: 4 (lower is better)
Translates to: SDKSLAYCPGACRTGACILKSHH*GRTRDL
Trigger: AAGATCTCTTGTTCTTCCCCAGTGATGACTTTTCAG...TATACATGCCCCTGTACGGCATGCTCCTGGACAATATGCCAAGGATTTATCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp GAAGAATCTGTTTCCTCTGGCGTGCATTCACAAGTTACAGAATTATCCAGCGAAATGCGGTTGAGGGTGTaGATCCATTCATCCATATCT +
Preference number: 4 (lower is better)
Translates to: EESVSSGVHSQVTELSSEMRLRV*IHSSIS
Trigger: AGATATGGATGAATGGATCCACACCCTCAACCGCAT...TTCGCTGGATAATTCTGTAACTTGTGAATGCACGCCAGAGGAAACAGATTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATAGAATCTGTTTCCTCTaGCGTGCATTCACAAGTTAC +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDRICFL*RAFTSY
Trigger: GTAACTTGTGAATGCACGCCAGAGGAAACAGATTCT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATCGATGTTACACAATTTaGATGCTCCAAGGGAACGTT +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDRCYTI*MLQGNV
Trigger: AACGTTCCCTTGGAGCATCCAAATTGTGTAACATCG...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTACACTTCAGGGGCTTaGCACTTTCTTCATCTGAAT +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDYTSGA*HFLHLN
Trigger: ATTCAGATGAAGAAAGTGCCAAGCCCCTGAAGTGTA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TGTTTCCTCTGGCGTGCATTCACAAGTTACAGAATTATCCAGCGAATCCAGACCATATGGTGTTTCTCATaGAGTTGTGTTGGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: CFLWRAFTSYRIIQRIQTIWCFS*SCVGSS
Trigger: TGAGCTACCAACACAACTCCATGAGAAACACCATAT...GGTCTGGATTCGCTGGATAATTCTGTAACTTGTGAATGCACGCCAGAGGAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCGCTCCTCATGGCACTTaGCCACAATGTCGGTCAGAA +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTAPHGT*PQCRSE
Trigger: TTCTGACCGACATTGTGGCCAAGTGCCATGAGGAGC...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTATAAACTTGCTATCTaGGCCTGCTTTCTTGGCTCT +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDYKLAI*ACFLGS
Trigger: AGAGCCAAGAAAGCAGGCCCAGATAGCAAGTTTATA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATGCTCTGGAGTCAGCATaGTTTACTGTAGAAATAGCT +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDALESA*FTVEIA
Trigger: AGCTATTTCTACAGTAAACCATGCTGACTCCAGAGC...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000645028.1
CDS-3UTR CCA 90 bp GTCAGGGTACTTCTTTGCATTGGTTTCTTCAAGAAAAGCTCGTGCATAGGCCATCACTGCTCTTCTCATTaGTACTTGGATTGGAGTCAA +
Preference number: 4 (lower is better)
Translates to: VRVLLCIGFFKKSSCIGHHCSSH*YLDWSQ
Trigger: TTGACTCCAATCCAAGTACCAATGAGAAGAGCAGTG...ATGGCCTATGCACGAGCTTTTCTTGAAGAAACCAATGCAAAGAAGTACCCTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATCACTGCTCTTCTCATTaGTACTTGGATTGGAGTCAA +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDHCSSH*YLDWSQ
Trigger: TTGACTCCAATCCAAGTACCAATGAGAAGAGCAGTG...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTAAGAGACCTGATGTCTaGCAGGAAGGATTGGATCCT +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGKRPDV*QEGLDP
Trigger: AGGATCCAATCCTTCCTGCCAGACATCAGGTCTCTT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTTGATGAGTTGTAAGTaGGACCGGACAATTGACTTC +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDLMSCK*DRTIDF
Trigger: GAAGTCAATTGTCCGGTCCCACTTACAACTCATCAA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTTCTGGCATGAATCTTaGCCATACTTTCCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGFWHES*PYFPAR
Trigger: CCTGGCTGGAAAGTATGGCCAAGATTCATGCCAGAA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp GGTAAGATTCAGGAAATCTCTGAGGCCGGGGAAGCTGGATTTTATTTGTGTCAAACATGCTTCCTCCACTaGGAGTTGTTAGTAATGAGT +
Preference number: 4 (lower is better)
Translates to: GKIQEISEAGEAGFYLCQTCFLH*ELLVMS
Trigger: ACTCATTACTAACAACTCCCAGTGGAGGAAGCATGT...TTGACACAAATAAAATCCAGCTTCCCCGGCCTCAGAGATTTCCTGAATCTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATAGCTTGAGTAATCTTTaGGAAATCTCGGACAGACCT +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDSLSNL*EISDRP
Trigger: AGGTCTGTCCGAGATTTCCCAAAGATTACTCAAGCT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGATGTAGGCATATTTaGGGTCCAAATCCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGGCRHI*GPNPWG
Trigger: ACCCCAAGGATTTGGACCCCAAATATGCCTACATCC...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATAAGCGGTTGATGTTGTaGTGCATTTCGAAATCTGTC +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDKRLML*CISKSV
Trigger: GACAGATTTCGAAATGCACCACAACATCAACCGCTT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp GTCAGGGTACTTCTTTGCATTGGTTTCTTCAAGAAAAGCTCGTGCATAGGCCATAAGCGGTTGATGTTGTaGTGCATTTCGAAATCTGTC +
Preference number: 4 (lower is better)
Translates to: VRVLLCIGFFKKSSCIGHKRLML*CISKSV
Trigger: GACAGATTTCGAAATGCACCACAACATCAACCGCTT...ATGGCCTATGCACGAGCTTTTCTTGAAGAAACCAATGCAAAGAAGTACCCTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp GTCCGTCTTCTCACTGCTCTTCTCATTGGTACTTGGATTGGAGTCAAGACTTGCGGTACTTCTTTGCATTaGTTTCTTCAAGAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: VRLLTALLIGTWIGVKTCGTSLH*FLQEKL
Trigger: GAGCTTTTCTTGAAGAAACCAATGCAAAGAAGTACC...GCAAGTCTTGACTCCAATCCAAGTACCAATGAGAAGAGCAGTGAGAAGACGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCGACCTCAGTTCTTCCTaGTACTCCAGCTGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTDLSSS*YSSWSS
Trigger: AGAGGACCAGCTGGAGTACCAGGAAGAACTGAGGTC...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATGGCAAATATTCAACCTaGCTTGATCAACACTGCTCA +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDGKYST*LDQHCS
Trigger: TGAGCAGTGTTGATCAAGCCAGGTTGAATATTTGCC...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTCCCATCGCTGCATCCTaGAGCCTACAAAATAACTTC +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGPIAAS*SLQNNF
Trigger: GAAGTTATTTTGTAGGCTCCAGGATGCAGCGATGGG...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TTCCATTGTGCAAAGCTGATTAAGCTCAGAAACCTTCTTGGACATCTCGTCAATCAAAATTTCGTGGGATaGTTCCTCTTGGCGTCGTCT +
Preference number: 4 (lower is better)
Translates to: FHCAKLIKLRNLLGHLVNQNFVG*FLLASS
Trigger: AGACGACGCCAAGAGGAACCATCCCACGAAATTTTG...ATTGACGAGATGTCCAAGAAGGTTTCTGAGCTTAATCAGCTTTGCACAATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTCAAAATTTCGTGGGATaGTTCCTCTTGGCGTCGTCT +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGQNFVG*FLLASS
Trigger: AGACGACGCCAAGAGGAACCATCCCACGAAATTTTG...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp ACTTTGTTGAATCGTAAACAAATTCTTCCACCTCCACTGTGGGTTCTGTTTGAGATCTTCAGGTACTGTTaGGTACAACGTGCGGATATC +
Preference number: 4 (lower is better)
Translates to: TLLNRKQILPPPLWVLFEIFRYC*VQRADI
Trigger: GATATCCGCACGTTGTACTCAACAGTACCTGAAGAT...CTCAAACAGAACCCACAGTGGAGGTGGAAGAATTTGTTTACGATTCAACAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTATCTTCAGGTACTGTTaGGTACAACGTGCGGATATC +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGIFRYC*VQRADI
Trigger: GATATCCGCACGTTGTACTCAACAGTACCTGAAGAT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATAATCTCAAAGGAATGTaGAGGAAGCTTCTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDNLKGM*RKLLWF
Trigger: AAACCAGAGAAGCTTCCTTCACATTCCTTTGAGATT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTATCTTCTGTTTCTGTaGGGTACTTTGCAAAGTCTG +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDYLLFL*GTLQSL
Trigger: CAGACTTTGCAAAGTACCTCACAGAAACAGAAGATA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTTTCTTCAAATGGTTTaGTCACAGACTCAGGTTCCA +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDFLQMV*SQTQVP
Trigger: TGGAACCTGAGTCTGTGATCAAACCATTTGAAGAAA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTCTTCCTGCTGTCTCTaGGGTCATAAAGTGCCACAC +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTSSCCL*GHKVPH
Trigger: GTGTGGCACTTTATGACCTCAGAGACAGCAGGAAGA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTCTGGCTATCATACTTaGGGTGTTTGGGGTAAATAT +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDSGYHT*GVWGKY
Trigger: ATATTTACCCCAAACACCTCAAGTATGATAGCCAGA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCGAGAAATCCGGATTCTaGGAGTGGTGCAGAACTGCT +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTEKSGF*EWCRTA
Trigger: AGCAGTTCTGCACCACTCTCAGAATCCGGATTTCTC...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp GCACACAGTTATATTCCGTGCCTTGTTGAAGCATTTCTGGCTATCATACTTGAGCAAATGTCGACACTTTaGAAAGTGGTTTGCCACCAT +
Preference number: 4 (lower is better)
Translates to: AHSYIPCLVEAFLAIILEQMSTL*KVVCHH
Trigger: ATGGTGGCAAACCACTTTTCAAAGTGTCGACATTTG...CTCAAGTATGATAGCCAGAAATGCTTCAACAAGGCACGGAATATAACTGTGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTTTGAGGTAGGTGACTaGGACATATCTTTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDFEVGD*DISFSL
Trigger: AAGAGAGAAAGATATGTCTCAGTCACCTACCTCAAA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTATGACTGGACAGAATaGTCCAGCTGCTCCTCATGG +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTYDWTE*SSCSSW
Trigger: CCATGAGGAGCAGCTGGATCATTCTGTCCAGTCATA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TATTTCCAAATCACATGGTCGGATAGGACCATGACAAGATTGTCCAATTCATTTTATGACTGGACAGAATaGTCCAGCTGCTCCTCATGG +
Preference number: 4 (lower is better)
Translates to: YFQITWSDRTMTRLSNSFYDWTE*SSCSSW
Trigger: CCATGAGGAGCAGCTGGATCATTCTGTCCAGTCATA...AAATGAATTGGACAATCTTGTCATGGTCCTATCCGACCATGTGATTTGGAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATCACGAACTTAATATATaGCTGGACAGAATGATCCAG +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDHELNI*LDRMIQ
Trigger: CTGGATCATTCTGTCCAGTCATATATTAAGTTCGTG...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TTCCATTGTGCAAAGCTGATTAAGCTCAGAAACCTTCTTGGACATCTCGTCAATGGTCGGATAGGACCATaGCAAGATTGTCCAATTCAT +
Preference number: 4 (lower is better)
Translates to: FHCAKLIKLRNLLGHLVNGRIGP*QDCPIH
Trigger: ATGAATTGGACAATCTTGTCATGGTCCTATCCGACC...ATTGACGAGATGTCCAAGAAGGTTTCTGAGCTTAATCAGCTTTGCACAATGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTCTAAAGCTAAGTGTCTaGCATCTTGGTCTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGLKLSV*HLGLPA
Trigger: TGCAGGAAGACCAAGATGTCAGACACTTAGCTTTAG...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTATAGCTGTCTGGCTTTaGAATCCTCCATTGGTGCTT +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGIAVWL*NPPLVL
Trigger: AAGCACCAATGGAGGATTTCAAAGCCAGACAGCTAT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCAAACGTCCAAGATGCTaGAGAAGTCGGACACCTCTG +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTKRPRC*RSRTPL
Trigger: CAGAGGTGTCCGACTTCTTCAGCATCTTGGACGTTT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTAAGGATTGGATCCTTTaGGAGTTCCATTGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGKDWIL*EFHCSG
Trigger: CCCAGAACAATGGAACTCTCAAAGGATCCAATCCTT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGCCTCAGTGTCTACATaGTGCACGATGTCTATTTCA +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGASVST*CTMSIS
Trigger: TGAAATAGACATCGTGCATCATGTAGACACTGAGGC...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCAGCGCTGTGGCTGACTaGTTGACTTGGAAAAAGAGC +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTSAVAD*LTWKKS
Trigger: GCTCTTTTTCCAAGTCAATCAGTCAGCCACAGCGCT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCGACTTCGTAACAGAATaGTCCACAGAGGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTDFVTE*STEVSR
Trigger: CCTGCTGACCTCTGTGGATCATTCTGTTACGAAGTC...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGTGGGACCGGACAATTaGCTTCTGCTTGTTAAATTC +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGVGPDN*LLLVKF
Trigger: GAATTTAACAAGCAGAAGTCAATTGTCCGGTCCCAC...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp ACACACATGTATAGCTGCTCCACCAGGATATTCTCATTGTATGGTGTATCTTGCTGCCACTTTCAGATATaGCCGATGAATGTCGTAGTA +
Preference number: 4 (lower is better)
Translates to: THMYSCSTRIFSLYGVSCCHFQI*PMNVVV
Trigger: TACTACGACATTCATCGGTCATATCTGAAAGTGGCA...GCAAGATACACCATACAATGAGAATATCCTGGTGGAGCAGCTATACATGTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp GCACACAGTTATATTCCGTGCCTTGTTGAAGCATTTCTGGCTATCATACTTGAGCATCTGCAAATTGCCTaGAGATCTCCTTCAAAAGCT +
Preference number: 4 (lower is better)
Translates to: AHSYIPCLVEAFLAIILEHLQIA*RSPSKA
Trigger: AGCTTTTGAAGGAGATCTTCAGGCAATTTGCAGATG...CTCAAGTATGATAGCCAGAAATGCTTCAACAAGGCACGGAATATAACTGTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR GCA 90 bp ATCTCTAGACCCCTGATTAGATGTATTGACAGTAAAAGGATACAGGTCCTTCAGGAATGGTCTGCATTTTaGTTATTCTGTCGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: ISRPLIRCIDSKRIQVLQEWSAF*LFCRPF
Trigger: GAAGGGCCGACAGAATAAGCAAAATGCAGACCATTC...CTGAAGGACCTGTATCCTTTTACTGTCAATACATCTAATCAGGGGTCTAGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR GCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGAATGGTCTGCATTTTaGTTATTCTGTCGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGEWSAF*LFCRPF
Trigger: GAAGGGCCGACAGAATAAGCAAAATGCAGACCATTC...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTTTGGCATTAGCTTTTaGATTGATGTCACAGGTGAC +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDFGISF*IDVTGD
Trigger: GTCACCTGTGACATCAATGCAAAAGCTAATGCCAAA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTAGGAGGCAGACTTGTTaGTATTGGGATGTTGTACTC +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGRRQTC*YWDVVL
Trigger: GAGTACAACATCCCAATAGCAACAAGTCTGCCTCCT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTATGTCACTCCCACCATaGTTTCCACTTGCAGAATCT +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGMSLPP*FPLAES
Trigger: AGATTCTGCAAGTGGAAAGCATGGTGGGAGTGACAT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCAGTCCTCTCCTTGCATaGCCTGGTCTTGAACACGAA +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTSPLLA*PGLEHE
Trigger: TTCGTGTTCAAGACCAGGGCATGCAAGGAGAGGACT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTTTGTGTCAATCAAGTaGTGTGCCATCGATTTTAGG +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDFVSIK*CAIDFR
Trigger: CCTAAAATCGATGGCACAGCACTTGATTGACACAAA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTGTATCCACAGAGTTTaGATGTTTGATAGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDCIHRV*MFDSCL
Trigger: CAGACAGCTATCAAACATGCAAACTCTGTGGATACA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTGTCCGTCTTCTCACTaGTCTTCTCATTGGTACTTG +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGCPSSH*SSHWYL
Trigger: CAAGTACCAATGAGAAGAGCAGTGAGAAGACGGACA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTGCGTAGTTCAGGAGTaGTTGCGTAGGAGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTCVVQE*LRRSLP
Trigger: TGGCAAACTCCTACGCAAGCACTCCTGAACTACGCA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTTGTTAGTAATGAGTTaGTATCACAGGGGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDLLVMS*YHRGGY
Trigger: ATACCCACCCCTGTGATAGCAACTCATTACTAACAA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTTCAAGAAAAGCTCGTaGATAGGCCATTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTFKKSS*IGHWPS
Trigger: GCTGGGCCAATGGCCTATGCACGAGCTTTTCTTGAA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATCATGCATCTGCAAATTaGCTGAAGATCTCCTTCAAA +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDHASAN*LKISFK
Trigger: TTTGAAGGAGATCTTCAGGCAATTTGCAGATGCATG...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TATTTCCAAATCACATGGTCGGATAGGACCATGACAAGATTGTCCAATTCATTTAAGGGCCTGCCCACATaGATCTGCAAATTGCCTGAA +
Preference number: 4 (lower is better)
Translates to: YFQITWSDRTMTRLSNSFKGLPT*ICKLPE
Trigger: TTCAGGCAATTTGCAGATGCATGTGGGCAGGCCCTT...AAATGAATTGGACAATCTTGTCATGGTCCTATCCGACCATGTGATTTGGAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR GCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTTCACGTCAAGGGCCTaGCCACATGCATCTGCAAAT +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTFTSRA*PHASAN
Trigger: ATTTGCAGATGCATGTGGGCAGGCCCTTGACGTGAA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATCTGAAAAGTCATCACTaGGGAAGAACAAGAGATCTT +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDLKSHH*GRTRDL
Trigger: AAGATCTCTTGTTCTTCCCCAGTGATGACTTTTCAG...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCCCCTTGGAAGACGAGTaGGAAGTGGTATCTTCATCC +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTPLEDE*EVVSSS
Trigger: GGATGAAGATACCACTTCCCACTCGTCTTCCAAGGG...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp GAAGAATCTGTTTCCTCTGGCGTGCATTCACAAGTTACAGAATTATCCAGCGAATACACTTCAGGGGCTTaGCACTTTCTTCATCTGAAT +
Preference number: 4 (lower is better)
Translates to: EESVSSGVHSQVTELSSEYTSGA*HFLHLN
Trigger: ATTCAGATGAAGAAAGTGCCAAGCCCCTGAAGTGTA...TTCGCTGGATAATTCTGTAACTTGTGAATGCACGCCAGAGGAAACAGATTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATATATGGTGTTTCTCATaGAGTTGTGTTGGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDIWCFS*SCVGSS
Trigger: TGAGCTACCAACACAACTCCATGAGAAACACCATAT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TTCCATTGTGCAAAGCTGATTAAGCTCAGAAACCTTCTTGGACATCTCGTCAATCGACACTTTGAAAAGTaGTTTGCCACCATCAACCCA +
Preference number: 4 (lower is better)
Translates to: FHCAKLIKLRNLLGHLVNRHFEK*FATINP
Trigger: TGGGTTGATGGTGGCAAACCACTTTTCAAAGTGTCG...ATTGACGAGATGTCCAAGAAGGTTTCTGAGCTTAATCAGCTTTGCACAATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTATTTCCAAATCACATaGTCGGATAGGACCATGACA +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDYFQIT*SDRTMT
Trigger: TGTCATGGTCCTATCCGACCATGTGATTTGGAAATA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTAATCTGGCAACGCTGTaGTTTGCCCTTCTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGNLATL*FALLVS
Trigger: AGAAACAAGAAGGGCAAACCACAGCGTTGCCAGATT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATCTTCAGATAAATCCTTaGCATATTGTCCAGGAGCAT +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDLQINP*HIVQEH
Trigger: ATGCTCCTGGACAATATGCCAAGGATTTATCTGAAG...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATAGAGTTCCATTGTTCTaGGTGGACTGCACAAATTTA +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDRVPLF*VDCTNL
Trigger: TAAATTTGTGCAGTCCACCCAGAACAATGGAACTCT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp CATGCTGATGTAATTGTTGACCATCTTAAACACATACCCTCGGTCCATAAATGTAAGAGACCTGATGTCTaGCAGGAAGGATTGGATCCT +
Preference number: 4 (lower is better)
Translates to: HADVIVDHLKHIPSVHKCKRPDV*QEGLDP
Trigger: AGGATCCAATCCTTCCTGCCAGACATCAGGTCTCTT...ACATTTATGGACCGAGGGTATGTGTTTAAGATGGTCAACAATTACATCAGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTATGGCCTTCATGACTaGAAGTGGAGTGCATCCATT +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGYGLHD*KWSASI
Trigger: AATGGATGCACTCCACTTCCAGTCATGAAGGCCATA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTGGAGTTGCTGGTCATaGTATTGTCTAACATCTGTA +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDWSCWS*YCLTSV
Trigger: TACAGATGTTAGACAATACCATGACCAGCAACTCCA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATCGATGTCTATTTCATTaGAGTTGCTGGTCATGGTAT +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDRCLFH*SCWSWY
Trigger: ATACCATGACCAGCAACTCCAATGAAATAGACATCG...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp GGTAAGATTCAGGAAATCTCTGAGGCCGGGGAAGCTGGATTTTATTTGTGTCAACGATGTCTATTTCATTaGAGTTGCTGGTCATGGTAT +
Preference number: 4 (lower is better)
Translates to: GKIQEISEAGEAGFYLCQRCLFH*SCWSWY
Trigger: ATACCATGACCAGCAACTCCAATGAAATAGACATCG...TTGACACAAATAAAATCCAGCTTCCCCGGCCTCAGAGATTTCCTGAATCTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGCATCGGCTATTAACTaGCTCACAGCTTTGATGAGT +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGASAIN*LTALMS
Trigger: ACTCATCAAAGCTGTGAGCCAGTTAATAGCCGATGC...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTATGGATGTAACACATaGCAGCCTCAGATAAATCTC +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDYGCNT*QPQINL
Trigger: GAGATTTATCTGAGGCTGCCATGTGTTACATCCATA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp ACTTTGTTGAATCGTAAACAAATTCTTCCACCTCCACTGTGGGTTCTGTTTGAGTGGGGTCCAAATCCTTaGGGTTTACCTTGTTGGAAT +
Preference number: 4 (lower is better)
Translates to: TLLNRKQILPPPLWVLFEWGPNP*GLPCWN
Trigger: ATTCCAACAAGGTAAACCCCAAGGATTTGGACCCCA...CTCAAACAGAACCCACAGTGGAGGTGGAAGAATTTGTTTACGATTCAACAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTGGGGTCCAAATCCTTaGGGTTTACCTTGTTGGAAT +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGWGPNP*GLPCWN
Trigger: ATTCCAACAAGGTAAACCCCAAGGATTTGGACCCCA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATAATTGCCACTTCAATTaGATTCAGTTCTGTGCTCGA +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDNCHFN*IQFCAR
Trigger: TCGAGCACAGAACTGAATCCAATTGAAGTGGCAATT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
3UTR CAA 72 bp ACATTTTTAGCCAGTTCCTCATGTACAGTCCTCTCCTaGCATGCCCTGGTCTTGAACACGAACTTAATATAT +
Preference number: 4 (lower is better)
Translates to: TFLASSSCTVLS*HALVLNTNLIY
Trigger: ATATATTAAGTTCGTGTTCAAGACCAGGGCATGCAAGGAGAGGACTGTACATGAGGAACTGGCTAAAAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CAA 72 bp AATTGGATTCAGTTCTGTGCTCGATTGGCTAATTACTaGTATTCTCTTCTTCACGTAGGGGAACAGGTGACT +
Preference number: 4 (lower is better)
Translates to: NWIQFCARLANY*YSLLHVGEQVT
Trigger: AGTCACCTGTTCCCCTACGTGAAGAAGAGAATACAAGTAATTAGCCAATCGAGCACAGAACTGAATCCAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CAA 72 bp CCTTCAAAAGCTTTACTTGGTTGTCAGGGTACTTCTTaGCATTGGTTTCTTCAAGAAAAGCTCGTGCATAGG +
Preference number: 4 (lower is better)
Translates to: PSKALLGCQGTS*HWFLQEKLVHR
Trigger: CCTATGCACGAGCTTTTCTTGAAGAAACCAATGCAAAGAAGTACCCTGACAACCAAGTAAAGCTTTTGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCCCATTCATCCATATCTaGCTCTGTTTCAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTPFIHI*LCFSCQ
Trigger: CTGGCAGCTGAAACAGAGTCAGATATGGATGAATGG...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTTTGCAGAATGCGGTTaGGGGTGTGGATCCATTCAT +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTFAECG*GCGSIH
Trigger: ATGAATGGATCCACACCCTCAACCGCATTCTGCAAA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp ACACACATGTATAGCTGCTCCACCAGGATATTCTCATTGTATGGTGTATCTTGCTTTCTTCAAATGGTTTaGTCACAGACTCAGGTTCCA +
Preference number: 4 (lower is better)
Translates to: THMYSCSTRIFSLYGVSCFLQMV*SQTQVP
Trigger: TGGAACCTGAGTCTGTGATCAAACCATTTGAAGAAA...GCAAGATACACCATACAATGAGAATATCCTGGTGGAGCAGCTATACATGTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTACATCCCTGAAGATTTaGGTTGAGGGCTTTACAGAT +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGTSLKI*VEGFTD
Trigger: ATCTGTAAAGCCCTCAACTCAAATCTTCAGGGATGT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTCCGTAACACATCCCTaGAGATTTGAGTTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTSVTHP*RFELRA
Trigger: AGCCCTCAACTCAAATCTTCAGGGATGTGTTACGGA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TATTTCCAAATCACATGGTCGGATAGGACCATGACAAGATTGTCCAATTCATTTTCCGTAACACATCCCTaGAGATTTGAGTTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: YFQITWSDRTMTRLSNSFSVTHP*RFELRA
Trigger: AGCCCTCAACTCAAATCTTCAGGGATGTGTTACGGA...AAATGAATTGGACAATCTTGTCATGGTCCTATCCGACCATGTGATTTGGAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCCCAAGAGCATCTGTCTaGCAGCAGCATGGTTTAGAT +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTPRASV*QQHGLD
Trigger: ATCTAAACCATGCTGCTGTCAGACAGATGCTCTTGG...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCCCTCTGGAAGTCCCTTaGTGTGAGGTTCTTCTGATT +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTPLEVP*CEVLLI
Trigger: AATCAGAAGAACCTCACATCAAGGGACTTCCAGAGG...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TATTTCCAAATCACATGGTCGGATAGGACCATGACAAGATTGTCCAATTCATTTCCTCTGGAAGTCCCTTaGTGTGAGGTTCTTCTGATT +
Preference number: 4 (lower is better)
Translates to: YFQITWSDRTMTRLSNSFPLEVP*CEVLLI
Trigger: AATCAGAAGAACCTCACATCAAGGGACTTCCAGAGG...AAATGAATTGGACAATCTTGTCATGGTCCTATCCGACCATGTGATTTGGAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCACTGTGGGTTCTGTTTaGGCCATCATGTTGAAAGGC +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTTVGSV*AIMLKG
Trigger: GCCTTTCAACATGATGGCTCAAACAGAACCCACAGT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp ATCTCTAGACCCCTGATTAGATGTATTGACAGTAAAAGGATACAGGTCCTTCAGTATTCCGTGCCTTGTTaGAGCATTTCTGGCTATCAT +
Preference number: 4 (lower is better)
Translates to: ISRPLIRCIDSKRIQVLQYSVPC*SISGYH
Trigger: ATGATAGCCAGAAATGCTTCAACAAGGCACGGAATA...CTGAAGGACCTGTATCCTTTTACTGTCAATACATCTAATCAGGGGTCTAGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTCAAATGTCGACACTTTaGAAAGTGGTTTGCCACCAT +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGQMSTL*KVVCHH
Trigger: ATGGTGGCAAACCACTTTTCAAAGTGTCGACATTTG...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATCTGAGTATTTACTGTTaGTACAACAAATGTCGACAC +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDLSIYC*YNKCRH
Trigger: GTGTCGACATTTGTTGTATCAACAGTAAATACTCAG...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCCTCTTGAGTCGATTCTaGAGGTGTCAAAGGATCTGG +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTLLSRF*RCQRIW
Trigger: CCAGATCCTTTGACACCTTCAGAATCGACTCAAGAG...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp CATGCTGATGTAATTGTTGACCATCTTAAACACATACCCTCGGTCCATAAATGTCTAAAGCTAAGTGTCTaGCATCTTGGTCTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: HADVIVDHLKHIPSVHKCLKLSV*HLGLPA
Trigger: TGCAGGAAGACCAAGATGTCAGACACTTAGCTTTAG...ACATTTATGGACCGAGGGTATGTGTTTAAGATGGTCAACAATTACATCAGCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTCTCCTGGTTTCTGCTTaGTCTAACTTGTCAAATCGA +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGLLVSA*SNLSNR
Trigger: TCGATTTGACAAGTTAGATCAAGCAGAAACCAGGAG...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATAGGTATCTGAAATTTTaGAGACAAACGTCCAAGATG +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDRYLKF*RQTSKM
Trigger: CATCTTGGACGTTTGTCTTCAAAATTTCAGATACCT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCCTTCAGCGCTGTGGCTaGCTGATTGACTTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTLQRCG*LIDLEK
Trigger: TTTTTCCAAGTCAATCAGTCAGCCACAGCGCTGAAG...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTCCCTTGAAAGAACGCTaGAGGAAACTTGCATACAAA +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGPLKER*RKLAYK
Trigger: TTTGTATGCAAGTTTCCTTCAGCGTTCTTTCAAGGG...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCATTGCAAGCGAATGTTaGAACCGAGAGCCTCCAATC +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTIASEC*NREPPI
Trigger: GATTGGAGGCTCTCGGTTTCAACATTCGCTTGCAAT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTCTCCGTTTCTGGCATaGATCTTGGCCATACTTTCC +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTSPFLA*ILAILS
Trigger: GGAAAGTATGGCCAAGATTCATGCCAGAAACGGAGA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTCAGATACTCTGCAATaGGAGCAGCAATATGGATGT +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGSDTLQ*EQQYGC
Trigger: ACATCCATATTGCTGCTCTCATTGCAGAGTATCTGA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp ATCTCTAGACCCCTGATTAGATGTATTGACAGTAAAAGGATACAGGTCCTTCAGTCAGATACTCTGCAATaGGAGCAGCAATATGGATGT +
Preference number: 4 (lower is better)
Translates to: ISRPLIRCIDSKRIQVLQSDTLQ*EQQYGC
Trigger: ACATCCATATTGCTGCTCTCATTGCAGAGTATCTGA...CTGAAGGACCTGTATCCTTTTACTGTCAATACATCTAATCAGGGGTCTAGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTGCCACTTTCAGATATaGCCGATGAATGTCGTAGTA +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGCHFQI*PMNVVV
Trigger: TACTACGACATTCATCGGTCATATCTGAAAGTGGCA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTCCATTGTGCAAAGCTaGTTAAGCTCAGAAACCTTC +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGSIVQS*LSSETF
Trigger: GAAGGTTTCTGAGCTTAATCAGCTTTGCACAATGGA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTCATCTGCAAATTGCCTaGAGATCTCCTTCAAAAGCT +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGHLQIA*RSPSKA
Trigger: AGCTTTTGAAGGAGATCTTCAGGCAATTTGCAGATG...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTCTTAGGGTTTGCATTTaGGCTACACATTCACTGGAA +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGLRVCI*ATHSLE
Trigger: TTCCAGTGAATGTGTAGCTCAAATGCAAACCCTAAG...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCCTGTTGAGTACAACGTaGGGATATCCCAGGAAACTG +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTLLSTT*GYPRKL
Trigger: CAGTTTCCTGGGATATCCGCACGTTGTACTCAACAG...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTCTGTTTCCTCTGGCGTaGATTCACAAGTTACAGAAT +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGLFPLA*IHKLQN
Trigger: ATTCTGTAACTTGTGAATGCACGCCAGAGGAAACAG...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTCTTCCAGGAATGGTCTaGATTTTGCTTATTCTGTCG +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGLPGMV*ILLILS
Trigger: CGACAGAATAAGCAAAATGCAGACCATTCCTGGAAG...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp ACTTTGTTGAATCGTAAACAAATTCTTCCACCTCCACTGTGGGTTCTGTTTGAGCTTCCAGGAATGGTCTaGATTTTGCTTATTCTGTCG +
Preference number: 4 (lower is better)
Translates to: TLLNRKQILPPPLWVLFELPGMV*ILLILS
Trigger: CGACAGAATAAGCAAAATGCAGACCATTCCTGGAAG...CTCAAACAGAACCCACAGTGGAGGTGGAAGAATTTGTTTACGATTCAACAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR GCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCGGCAACGCTGTGGTTTaGCCTTCTTGTTTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTGNAVV*PSCFFK
Trigger: CTTGAAGAAACAAGAAGGGCAAACCACAGCGTTGCC...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp CATGCTGATGTAATTGTTGACCATCTTAAACACATACCCTCGGTCCATAAATGTTGTCCGTCTTCTCACTaGTCTTCTCATTGGTACTTG +
Preference number: 4 (lower is better)
Translates to: HADVIVDHLKHIPSVHKCCPSSH*SSHWYL
Trigger: CAAGTACCAATGAGAAGAGCAGTGAGAAGACGGACA...ACATTTATGGACCGAGGGTATGTGTTTAAGATGGTCAACAATTACATCAGCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR GCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTACACACATGTATAGCTaGTCCACCAGGATATTCTCA +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGTHMYS*STRIFS
Trigger: TGAGAATATCCTGGTGGAGCAGCTATACATGTGTGT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTCGGTTGATGTTGTGGTaGATTTCGAAATCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGRLMLW*ISKSVF
Trigger: GAAGACAGATTTCGAAATGCACCACAACATCAACCG...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp ACTTTGTTGAATCGTAAACAAATTCTTCCACCTCCACTGTGGGTTCTGTTTGAGCGGTTGATGTTGTGGTaGATTTCGAAATCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: TLLNRKQILPPPLWVLFERLMLW*ISKSVF
Trigger: GAAGACAGATTTCGAAATGCACCACAACATCAACCG...CTCAAACAGAACCCACAGTGGAGGTGGAAGAATTTGTTTACGATTCAACAAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR GCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGACATCTCGTCAATTaGCACTTCAATTGGATTCAG +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGGHLVN*HFNWIQ
Trigger: CTGAATCCAATTGAAGTGGCAATTGACGAGATGTCC...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATGTCAGGGTACTTCTTTaGATTGGTTTCTTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDVRVLL*IGFFKK
Trigger: TTTCTTGAAGAAACCAATGCAAAGAAGTACCCTGAC...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCCTGCCCACATGCATCTaGAAATTGCCTGAAGATCTC +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTLPTCI*KLPEDL
Trigger: GAGATCTTCAGGCAATTTGCAGATGCATGTGGGCAG...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTAGCCTAGGCTTTTCTTaGATTATGATGAGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGSLGFS*IMMRVL
Trigger: CAGAACCCTCATCATAATGCAAGAAAAGCCTAGGCT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTAGAATCTGTTTCCTCTaGCGTGCATTCACAAGTTAC +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGRICFL*RAFTSY
Trigger: GTAACTTGTGAATGCACGCCAGAGGAAACAGATTCT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TCAGATAAATCCTTGGCATATTGTCCAGGAGCATGCCGTACAGGGGCATGTATAATACTTGTTGGAGTCTaGGTTCTTAATATAAGGTTC +
Preference number: 4 (lower is better)
Translates to: SDKSLAYCPGACRTGACIILVGV*VLNIRF
Trigger: GAACCTTATATTAAGAACCCAGACTCCAACAAGTAT...TATACATGCCCCTGTACGGCATGCTCCTGGACAATATGCCAAGGATTTATCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTCGATGTTACACAATTTaGATGCTCCAAGGGAACGTT +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGRCYTI*MLQGNV
Trigger: AACGTTCCCTTGGAGCATCCAAATTGTGTAACATCG...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTACACTTCAGGGGCTTaGCACTTTCTTCATCTGAAT +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGYTSGA*HFLHLN
Trigger: ATTCAGATGAAGAAAGTGCCAAGCCCCTGAAGTGTA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTATAAACTTGCTATCTaGGCCTGCTTTCTTGGCTCT +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGYKLAI*ACFLGS
Trigger: AGAGCCAAGAAAGCAGGCCCAGATAGCAAGTTTATA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGCTCTGGAGTCAGCATaGTTTACTGTAGAAATAGCT +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGALESA*FTVEIA
Trigger: AGCTATTTCTACAGTAAACCATGCTGACTCCAGAGC...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000645028.1
CDS-3UTR CCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTTGCTAAAGATGCTCTaGAGTCAGCATGGTTTACTG +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGLLKML*SQHGLL
Trigger: CAGTAAACCATGCTGACTCCAGAGCATCTTTAGCAA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTCTTCTCATTGGTACTTaGATTGGAGTCAAGACTTGC +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGLLIGT*IGVKTC
Trigger: GCAAGTCTTGACTCCAATCCAAGTACCAATGAGAAG...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTCACTGCTCTTCTCATTaGTACTTGGATTGGAGTCAA +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGHCSSH*YLDWSQ
Trigger: TTGACTCCAATCCAAGTACCAATGAGAAGAGCAGTG...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTCAAAGACAAGGGTCTTaGGATCTTTTCACAGTTGTC +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGQRQGS*DLFTVV
Trigger: GACAACTGTGAAAAGATCCCAAGACCCTTGTCTTTG...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCAAGAGACCTGATGTCTaGCAGGAAGGATTGGATCCT +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTKRPDV*QEGLDP
Trigger: AGGATCCAATCCTTCCTGCCAGACATCAGGTCTCTT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp CATGCTGATGTAATTGTTGACCATCTTAAACACATACCCTCGGTCCATAAATGTCTTCATGACTGGAAGTaGAGTGCATCCATTGTGACA +
Preference number: 4 (lower is better)
Translates to: HADVIVDHLKHIPSVHKCLHDWK*SASIVT
Trigger: TGTCACAATGGATGCACTCCACTTCCAGTCATGAAG...ACATTTATGGACCGAGGGTATGTGTTTAAGATGGTCAACAATTACATCAGCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTTTCATTGGAGTTGCTaGTCATGGTATTGTCTAACA +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDFHWSC*SWYCLT
Trigger: TGTTAGACAATACCATGACCAGCAACTCCAATGAAA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTTGATGAGTTGTAAGTaGGACCGGACAATTGACTTC +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGLMSCK*DRTIDF
Trigger: GAAGTCAATTGTCCGGTCCCACTTACAACTCATCAA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp CATGCTGATGTAATTGTTGACCATCTTAAACACATACCCTCGGTCCATAAATGTCCTTCATCTGAGCTGTaGCCATCAAAACAGTCCTTA +
Preference number: 4 (lower is better)
Translates to: HADVIVDHLKHIPSVHKCPSSEL*PSKQSL
Trigger: TAAGGACTGTTTTGATGGCCACAGCTCAGATGAAGG...ACATTTATGGACCGAGGGTATGTGTTTAAGATGGTCAACAATTACATCAGCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTACATGCTTCCTCCACTaGGAGTTGTTAGTAATGAGT +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGTCFLH*ELLVMS
Trigger: ACTCATTACTAACAACTCCCAGTGGAGGAAGCATGT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTAGCTTGAGTAATCTTTaGGAAATCTCGGACAGACCT +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGSLSNL*EISDRP
Trigger: AGGTCTGTCCGAGATTTCCCAAAGATTACTCAAGCT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATAGTTCTGTGCTCGATTaGCTAATTACTTGTATTCTC +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDSSVLD*LITCIL
Trigger: GAGAATACAAGTAATTAGCCAATCGAGCACAGAACT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATGGTACTTCTTTGCATTaGTTTCTTCAAGAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDGTSLH*FLQEKL
Trigger: GAGCTTTTCTTGAAGAAACCAATGCAAAGAAGTACC...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCATCTTCAGGTACTGTTaGGTACAACGTGCGGATATC +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTIFRYC*VQRADI
Trigger: GATATCCGCACGTTGTACTCAACAGTACCTGAAGAT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTAATCTCAAAGGAATGTaGAGGAAGCTTCTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGNLKGM*RKLLWF
Trigger: AAACCAGAGAAGCTTCCTTCACATTCCTTTGAGATT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp ACTTTGTTGAATCGTAAACAAATTCTTCCACCTCCACTGTGGGTTCTGTTTGAGAATCTCAAAGGAATGTaGAGGAAGCTTCTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: TLLNRKQILPPPLWVLFENLKGM*RKLLWF
Trigger: AAACCAGAGAAGCTTCCTTCACATTCCTTTGAGATT...CTCAAACAGAACCCACAGTGGAGGTGGAAGAATTTGTTTACGATTCAACAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp TTCCATTGTGCAAAGCTGATTAAGCTCAGAAACCTTCTTGGACATCTCGTCAATTATCTTCTGTTTCTGTaGGGTACTTTGCAAAGTCTG +
Preference number: 4 (lower is better)
Translates to: FHCAKLIKLRNLLGHLVNYLLFL*GTLQSL
Trigger: CAGACTTTGCAAAGTACCTCACAGAAACAGAAGATA...ATTGACGAGATGTCCAAGAAGGTTTCTGAGCTTAATCAGCTTTGCACAATGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTTTCTTCAAATGGTTTaGTCACAGACTCAGGTTCCA +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGFLQMV*SQTQVP
Trigger: TGGAACCTGAGTCTGTGATCAAACCATTTGAAGAAA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp CATGCTGATGTAATTGTTGACCATCTTAAACACATACCCTCGGTCCATAAATGTACATCCCTGAAGATTTaGGTTGAGGGCTTTACAGAT +
Preference number: 4 (lower is better)
Translates to: HADVIVDHLKHIPSVHKCTSLKI*VEGFTD
Trigger: ATCTGTAAAGCCCTCAACTCAAATCTTCAGGGATGT...ACATTTATGGACCGAGGGTATGTGTTTAAGATGGTCAACAATTACATCAGCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGTTGTCCTTAAATACTaGTCTTACTGCCCAAGCAAA +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGVVLKY*SYCPSK
Trigger: TTTGCTTGGGCAGTAAGATCAGTATTTAAGGACAAC...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp ATCTCTAGACCCCTGATTAGATGTATTGACAGTAAAAGGATACAGGTCCTTCAGGTTGTCCTTAAATACTaGTCTTACTGCCCAAGCAAA +
Preference number: 4 (lower is better)
Translates to: ISRPLIRCIDSKRIQVLQVVLKY*SYCPSK
Trigger: TTTGCTTGGGCAGTAAGATCAGTATTTAAGGACAAC...CTGAAGGACCTGTATCCTTTTACTGTCAATACATCTAATCAGGGGTCTAGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTCTGGCTATCATACTTaGGGTGTTTGGGGTAAATAT +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGSGYHT*GVWGKY
Trigger: ATATTTACCCCAAACACCTCAAGTATGATAGCCAGA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTAATTTTCACCTCATCTaGGAAATCCGGATTCTGAGA +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGNFHLI*EIRILR
Trigger: TCTCAGAATCCGGATTTCTCAGATGAGGTGAAAATT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTTTGAGGTAGGTGACTaGGACATATCTTTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGFEVGD*DISFSL
Trigger: AAGAGAGAAAGATATGTCTCAGTCACCTACCTCAAA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp ATCTCTAGACCCCTGATTAGATGTATTGACAGTAAAAGGATACAGGTCCTTCAGTTTGAGGTAGGTGACTaGGACATATCTTTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: ISRPLIRCIDSKRIQVLQFEVGD*DISFSL
Trigger: AAGAGAGAAAGATATGTCTCAGTCACCTACCTCAAA...CTGAAGGACCTGTATCCTTTTACTGTCAATACATCTAATCAGGGGTCTAGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCGATGCATGTAACTCTTaGGTCGATTCTGAAGGTGTC +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTDACNS*VDSEGV
Trigger: GACACCTTCAGAATCGACTCAAGAGTTACATGCATC...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCCTAAAGCTAAGTGTCTaGCATCTTGGTCTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTLKLSV*HLGLPA
Trigger: TGCAGGAAGACCAAGATGTCAGACACTTAGCTTTAG...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTCATCTCTAGACCCCTaGTTAGATGTATTGACAGTA +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGSSLDP*LDVLTV
Trigger: TACTGTCAATACATCTAATCAGGGGTCTAGAGATGA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCAAGGATTGGATCCTTTaGGAGTTCCATTGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTKDWIL*EFHCSG
Trigger: CCCAGAACAATGGAACTCTCAAAGGATCCAATCCTT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTCAAAATTCTTCCTCATaGAAAAGTACAGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGQNSSS*KSTEGL
Trigger: CAGCCCTTCTGTACTTTTTCATGAGGAAGAATTTTG...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp ACTTTGTTGAATCGTAAACAAATTCTTCCACCTCCACTGTGGGTTCTGTTTGAGCAAAATTCTTCCTCATaGAAAAGTACAGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: TLLNRKQILPPPLWVLFEQNSSS*KSTEGL
Trigger: CAGCCCTTCTGTACTTTTTCATGAGGAAGAATTTTG...CTCAAACAGAACCCACAGTGGAGGTGGAAGAATTTGTTTACGATTCAACAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCGTGGGACCGGACAATTaGCTTCTGCTTGTTAAATTC +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTVGPDN*LLLVKF
Trigger: GAATTTAACAAGCAGAAGTCAATTGTCCGGTCCCAC...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTAGCCTAGGCTTTTCTTaGGAACTAAATCTGTGGATT +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGSLGFS*ELNLWI
Trigger: AATCCACAGATTTAGTTCTCAAGAAAAGCCTAGGCT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409592.7
CDS-3UTR GCA 90 bp TTCCATTGTGCAAAGCTGATTAAGCTCAGAAACCTTCTTGGACATCTCGTCAATTTTGGCATTAGCTTTTaGATTGATGTCACAGGTGAC +
Preference number: 4 (lower is better)
Translates to: FHCAKLIKLRNLLGHLVNFGISF*IDVTGD
Trigger: GTCACCTGTGACATCAATGCAAAAGCTAATGCCAAA...ATTGACGAGATGTCCAAGAAGGTTTCTGAGCTTAATCAGCTTTGCACAATGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR GCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTTTGGCATTAGCTTTTaGATTGATGTCACAGGTGAC +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGFGISF*IDVTGD
Trigger: GTCACCTGTGACATCAATGCAAAAGCTAATGCCAAA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCATGTCACTCCCACCATaGTTTCCACTTGCAGAATCT +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTMSLPP*FPLAES
Trigger: AGATTCTGCAAGTGGAAAGCATGGTGGGAGTGACAT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TATTTCCAAATCACATGGTCGGATAGGACCATGACAAGATTGTCCAATTCATTTATGTCACTCCCACCATaGTTTCCACTTGCAGAATCT +
Preference number: 4 (lower is better)
Translates to: YFQITWSDRTMTRLSNSFMSLPP*FPLAES
Trigger: AGATTCTGCAAGTGGAAAGCATGGTGGGAGTGACAT...AAATGAATTGGACAATCTTGTCATGGTCCTATCCGACCATGTGATTTGGAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR GCA 90 bp ATCTCTAGACCCCTGATTAGATGTATTGACAGTAAAAGGATACAGGTCCTTCAGTTTGTGTCAATCAAGTaGTGTGCCATCGATTTTAGG +
Preference number: 4 (lower is better)
Translates to: ISRPLIRCIDSKRIQVLQFVSIK*CAIDFR
Trigger: CCTAAAATCGATGGCACAGCACTTGATTGACACAAA...CTGAAGGACCTGTATCCTTTTACTGTCAATACATCTAATCAGGGGTCTAGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR GCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTGTATCCACAGAGTTTaGATGTTTGATAGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGCIHRV*MFDSCL
Trigger: CAGACAGCTATCAAACATGCAAACTCTGTGGATACA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp ATCTCTAGACCCCTGATTAGATGTATTGACAGTAAAAGGATACAGGTCCTTCAGTGTATCCACAGAGTTTaGATGTTTGATAGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: ISRPLIRCIDSKRIQVLQCIHRV*MFDSCL
Trigger: CAGACAGCTATCAAACATGCAAACTCTGTGGATACA...CTGAAGGACCTGTATCCTTTTACTGTCAATACATCTAATCAGGGGTCTAGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR GCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTGTCCGTCTTCTCACTaGTCTTCTCATTGGTACTTG +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTCPSSH*SSHWYL
Trigger: CAAGTACCAATGAGAAGAGCAGTGAGAAGACGGACA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTTTGGGGTTAGAAAGTaGATTTTTGCCTCGAATTAT +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDFGVRK*IFASNY
Trigger: ATAATTCGAGGCAAAAATGCACTTTCTAACCCCAAA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TTCCATTGTGCAAAGCTGATTAAGCTCAGAAACCTTCTTGGACATCTCGTCAATTTGTTAGTAATGAGTTaGTATCACAGGGGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: FHCAKLIKLRNLLGHLVNLLVMS*YHRGGY
Trigger: ATACCCACCCCTGTGATAGCAACTCATTACTAACAA...ATTGACGAGATGTCCAAGAAGGTTTCTGAGCTTAATCAGCTTTGCACAATGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR GCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTTGTTAGTAATGAGTTaGTATCACAGGGGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGLLVMS*YHRGGY
Trigger: ATACCCACCCCTGTGATAGCAACTCATTACTAACAA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp CATGCTGATGTAATTGTTGACCATCTTAAACACATACCCTCGGTCCATAAATGTGGACATCTCGTCAATTaGCACTTCAATTGGATTCAG +
Preference number: 4 (lower is better)
Translates to: HADVIVDHLKHIPSVHKCGHLVN*HFNWIQ
Trigger: CTGAATCCAATTGAAGTGGCAATTGACGAGATGTCC...ACATTTATGGACCGAGGGTATGTGTTTAAGATGGTCAACAATTACATCAGCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR GCA 90 bp ATCTCTAGACCCCTGATTAGATGTATTGACAGTAAAAGGATACAGGTCCTTCAGCATGCATCTGCAAATTaGCTGAAGATCTCCTTCAAA +
Preference number: 4 (lower is better)
Translates to: ISRPLIRCIDSKRIQVLQHASAN*LKISFK
Trigger: TTTGAAGGAGATCTTCAGGCAATTTGCAGATGCATG...CTGAAGGACCTGTATCCTTTTACTGTCAATACATCTAATCAGGGGTCTAGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR GCA 90 bp ATCTCTAGACCCCTGATTAGATGTATTGACAGTAAAAGGATACAGGTCCTTCAGTTCCCCGAGATTAGCTaGAAATTCAGAAAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: ISRPLIRCIDSKRIQVLQFPEIS*KFRKFS
Trigger: AGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAA...CTGAAGGACCTGTATCCTTTTACTGTCAATACATCTAATCAGGGGTCTAGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR GCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTTCCCCGAGATTAGCTaGAAATTCAGAAAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGFPEIS*KFRKFS
Trigger: AGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTCTGAAAAGTCATCACTaGGGAAGAACAAGAGATCTT +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGLKSHH*GRTRDL
Trigger: AAGATCTCTTGTTCTTCCCCAGTGATGACTTTTCAG...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTTATCAGCATCTTCATaGTCAATCTCAAAGGAATGT +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDLSASS*SISKEC
Trigger: ACATTCCTTTGAGATTGACCATGAAGATGCTGATAA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATATACTTGTTGGAGTCTaGGTTCTTAATATAAGGTTC +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDILVGV*VLNIRF
Trigger: GAACCTTATATTAAGAACCCAGACTCCAACAAGTAT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTATATGGTGTTTCTCATaGAGTTGTGTTGGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGIWCFS*SCVGSS
Trigger: TGAGCTACCAACACAACTCCATGAGAAACACCATAT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTCAGACTTGTTGCTATTaGGATGTTGTACTCTTGAGA +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGQTCCY*DVVLLR
Trigger: TCTCAAGAGTACAACATCCCAATAGCAACAAGTCTG...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCCGACACTTTGAAAAGTaGTTTGCCACCATCAACCCA +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTRHFEK*FATINP
Trigger: TGGGTTGATGGTGGCAAACCACTTTTCAAAGTGTCG...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATAAATGCATTCACATGTaGATCCTGAGTATTTACTGT +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDKCIHM*ILSIYC
Trigger: ACAGTAAATACTCAGGATCCACATGTGAATGCATTT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp GGTAAGATTCAGGAAATCTCTGAGGCCGGGGAAGCTGGATTTTATTTGTGTCAAAAATGCATTCACATGTaGATCCTGAGTATTTACTGT +
Preference number: 4 (lower is better)
Translates to: GKIQEISEAGEAGFYLCQKCIHM*ILSIYC
Trigger: ACAGTAAATACTCAGGATCCACATGTGAATGCATTT...TTGACACAAATAAAATCCAGCTTCCCCGGCCTCAGAGATTTCCTGAATCTTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCAATCTGGCAACGCTGTaGTTTGCCCTTCTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTNLATL*FALLVS
Trigger: AGAAACAAGAAGGGCAAACCACAGCGTTGCCAGATT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTCTTCAGATAAATCCTTaGCATATTGTCCAGGAGCAT +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGLQINP*HIVQEH
Trigger: ATGCTCCTGGACAATATGCCAAGGATTTATCTGAAG...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTCATTGGTACTTGGATTaGAGTCAAGACTTGCTAAAG +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGHWYLD*SQDLLK
Trigger: CTTTAGCAAGTCTTGACTCCAATCCAAGTACCAATG...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCCTTCATGACTGGAAGTaGAGTGCATCCATTGTGACA +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTLHDWK*SASIVT
Trigger: TGTCACAATGGATGCACTCCACTTCCAGTCATGAAG...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTATGGCCTTCATGACTaGAAGTGGAGTGCATCCATT +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTYGLHD*KWSASI
Trigger: AATGGATGCACTCCACTTCCAGTCATGAAGGCCATA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTGGAGTTGCTGGTCATaGTATTGTCTAACATCTGTA +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGWSCWS*YCLTSV
Trigger: TACAGATGTTAGACAATACCATGACCAGCAACTCCA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTCGATGTCTATTTCATTaGAGTTGCTGGTCATGGTAT +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGRCLFH*SCWSWY
Trigger: ATACCATGACCAGCAACTCCAATGAAATAGACATCG...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCGCATCGGCTATTAACTaGCTCACAGCTTTGATGAGT +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTASAIN*LTALMS
Trigger: ACTCATCAAAGCTGTGAGCCAGTTAATAGCCGATGC...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCCCTTCATCTGAGCTGTaGCCATCAAAACAGTCCTTA +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTPSSEL*PSKQSL
Trigger: TAAGGACTGTTTTGATGGCCACAGCTCAGATGAAGG...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTGGGGTCCAAATCCTTaGGGTTTACCTTGTTGGAAT +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTWGPNP*GLPCWN
Trigger: ATTCCAACAAGGTAAACCCCAAGGATTTGGACCCCA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTAATTGCCACTTCAATTaGATTCAGTTCTGTGCTCGA +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGNCHFN*IQFCAR
Trigger: TCGAGCACAGAACTGAATCCAATTGAAGTGGCAATT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTTCAAAAGCTTTACTTaGTTGTCAGGGTACTTCTTT +
Preference number: 4 (lower is better)
Translates to: SSPRLAANSESSLRGGSDFKSFT*LSGYFF
Trigger: AAAGAAGTACCCTGACAACCAAGTAAAGCTTTTGAA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
3UTR CAA 72 bp TGGTTTCTGCTTGATCTAACTTGTCAAATCGAAGAGTaGAGCCAATCAAAGACAAGGGTCTTGGGATCTTTT +
Preference number: 4 (lower is better)
Translates to: WFLLDLTCQIEE*SQSKTRVLGSF
Trigger: AAAAGATCCCAAGACCCTTGTCTTTGATTGGCTCAACTCTTCGATTTGACAAGTTAGATCAAGCAGAAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CAA 72 bp AATTGCCACTTCAATTGGATTCAGTTCTGTGCTCGATaGGCTAATTACTTGTATTCTCTTCTTCACGTAGGG +
Preference number: 4 (lower is better)
Translates to: NCHFNWIQFCAR*ANYLYSLLHVG
Trigger: CCCTACGTGAAGAAGAGAATACAAGTAATTAGCCAATCGAGCACAGAACTGAATCCAATTGAAGTGGCAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CAA 72 bp TGCAAATTGCCTGAAGATCTCCTTCAAAAGCTTTACTaGGTTGTCAGGGTACTTCTTTGCATTGGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: CKLPEDLLQKLY*VVRVLLCIGFF
Trigger: GAAGAAACCAATGCAAAGAAGTACCCTGACAACCAAGTAAAGCTTTTGAAGGAGATCTTCAGGCAATTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp CATGCTGATGTAATTGTTGACCATCTTAAACACATACCCTCGGTCCATAAATGTTCTGGCTATCATACTTaGGGTGTTTGGGGTAAATAT +
Preference number: 4 (lower is better)
Translates to: HADVIVDHLKHIPSVHKCSGYHT*GVWGKY
Trigger: ATATTTACCCCAAACACCTCAAGTATGATAGCCAGA...ACATTTATGGACCGAGGGTATGTGTTTAAGATGGTCAACAATTACATCAGCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTATTCCGTGCCTTGTTaGAGCATTTCTGGCTATCAT +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTYSVPC*SISGYH
Trigger: ATGATAGCCAGAAATGCTTCAACAAGGCACGGAATA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCCAAATGTCGACACTTTaGAAAGTGGTTTGCCACCAT +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTQMSTL*KVVCHH
Trigger: ATGGTGGCAAACCACTTTTCAAAGTGTCGACATTTG...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTCTGAGTATTTACTGTTaGTACAACAAATGTCGACAC +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGLSIYC*YNKCRH
Trigger: GTGTCGACATTTGTTGTATCAACAGTAAATACTCAG...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp ATCTCTAGACCCCTGATTAGATGTATTGACAGTAAAAGGATACAGGTCCTTCAGCTGAGTATTTACTGTTaGTACAACAAATGTCGACAC +
Preference number: 4 (lower is better)
Translates to: ISRPLIRCIDSKRIQVLQLSIYC*YNKCRH
Trigger: GTGTCGACATTTGTTGTATCAACAGTAAATACTCAG...CTGAAGGACCTGTATCCTTTTACTGTCAATACATCTAATCAGGGGTCTAGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCCTCCTGGTTTCTGCTTaGTCTAACTTGTCAAATCGA +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTLLVSA*SNLSNR
Trigger: TCGATTTGACAAGTTAGATCAAGCAGAAACCAGGAG...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTAGGTATCTGAAATTTTaGAGACAAACGTCCAAGATG +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGRYLKF*RQTSKM
Trigger: CATCTTGGACGTTTGTCTTCAAAATTTCAGATACCT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGACCCTTTTCATCAATaGATTTTGACAGTCACATTG +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGDPFHQ*ILTVTL
Trigger: CAATGTGACTGTCAAAATTCATTGATGAAAAGGGTC...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTGCCACTTTCAGATATaGCCGATGAATGTCGTAGTA +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTCHFQI*PMNVVV
Trigger: TACTACGACATTCATCGGTCATATCTGAAAGTGGCA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTCCATTGTGCAAAGCTaGTTAAGCTCAGAAACCTTC +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTSIVQS*LSSETF
Trigger: GAAGGTTTCTGAGCTTAATCAGCTTTGCACAATGGA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCCATCTGCAAATTGCCTaGAGATCTCCTTCAAAAGCT +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTHLQIA*RSPSKA
Trigger: AGCTTTTGAAGGAGATCTTCAGGCAATTTGCAGATG...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCCTTAGGGTTTGCATTTaGGCTACACATTCACTGGAA +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTLRVCI*ATHSLE
Trigger: TTCCAGTGAATGTGTAGCTCAAATGCAAACCCTAAG...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCCTGTTTCCTCTGGCGTaGATTCACAAGTTACAGAAT +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTLFPLA*IHKLQN
Trigger: ATTCTGTAACTTGTGAATGCACGCCAGAGGAAACAG...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCCTTCCAGGAATGGTCTaGATTTTGCTTATTCTGTCG +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTLPGMV*ILLILS
Trigger: CGACAGAATAAGCAAAATGCAGACCATTCCTGGAAG...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCGTTACACAATTTGGATaGTCCAAGGGAACGTTGTCA +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTVTQFG*SKGTLS
Trigger: TGACAACGTTCCCTTGGAGCATCCAAATTGTGTAAC...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TATTTCCAAATCACATGGTCGGATAGGACCATGACAAGATTGTCCAATTCATTTGTTACACAATTTGGATaGTCCAAGGGAACGTTGTCA +
Preference number: 4 (lower is better)
Translates to: YFQITWSDRTMTRLSNSFVTQFG*SKGTLS
Trigger: TGACAACGTTCCCTTGGAGCATCCAAATTGTGTAAC...AAATGAATTGGACAATCTTGTCATGGTCCTATCCGACCATGTGATTTGGAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR GCA 90 bp GAAGAATCTGTTTCCTCTGGCGTGCATTCACAAGTTACAGAATTATCCAGCGAATTTGGGGTTAGAAAGTaGATTTTTGCCTCGAATTAT +
Preference number: 4 (lower is better)
Translates to: EESVSSGVHSQVTELSSEFGVRK*IFASNY
Trigger: ATAATTCGAGGCAAAAATGCACTTTCTAACCCCAAA...TTCGCTGGATAATTCTGTAACTTGTGAATGCACGCCAGAGGAAACAGATTCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR GCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTCTATTTCATTGGAGTTaGTGGTCATGGTATTGTCTA +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGLFHWS*WSWYCL
Trigger: TAGACAATACCATGACCAGCAACTCCAATGAAATAG...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTCTTTTCAGATACTCTaGAATGAGAGCAGCAATATG +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGSFQIL*NESSNM
Trigger: CATATTGCTGCTCTCATTGCAGAGTATCTGAAAAGA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCCGGTTGATGTTGTGGTaGATTTCGAAATCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTRLMLW*ISKSVF
Trigger: GAAGACAGATTTCGAAATGCACCACAACATCAACCG...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCGGACATCTCGTCAATTaGCACTTCAATTGGATTCAG +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTGHLVN*HFNWIQ
Trigger: CTGAATCCAATTGAAGTGGCAATTGACGAGATGTCC...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGTCAGGGTACTTCTTTaGATTGGTTTCTTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGVRVLL*IGFFKK
Trigger: TTTCTTGAAGAAACCAATGCAAAGAAGTACCCTGAC...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCAGCCTAGGCTTTTCTTaGATTATGATGAGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTSLGFS*IMMRVL
Trigger: CAGAACCCTCATCATAATGCAAGAAAAGCCTAGGCT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCAAGACGAGTGGGAAGTaGTATCTTCATCCTTATCAG +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTKTSGK*YLHPYQ
Trigger: CTGATAAGGATGAAGATACCACTTCCCACTCGTCTT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCAGAATCTGTTTCCTCTaGCGTGCATTCACAAGTTAC +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTRICFL*RAFTSY
Trigger: GTAACTTGTGAATGCACGCCAGAGGAAACAGATTCT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTAGCTTTTTCTTCAAATaGTTTGATCACAGACTCAGG +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGSFFFK*FDHRLR
Trigger: CCTGAGTCTGTGATCAAACCATTTGAAGAAAAAGCT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp CATGCTGATGTAATTGTTGACCATCTTAAACACATACCCTCGGTCCATAAATGTCTGTCCACATTTCCCTaGTTGTCCTTAAATACTGAT +
Preference number: 4 (lower is better)
Translates to: HADVIVDHLKHIPSVHKCLSTFP*LSLNTD
Trigger: ATCAGTATTTAAGGACAACCAGGGAAATGTGGACAG...ACATTTATGGACCGAGGGTATGTGTTTAAGATGGTCAACAATTACATCAGCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTTGTTGAAGCATTTCTaGCTATCATACTTGAGGTGT +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGLLKHF*LSYLRC
Trigger: ACACCTCAAGTATGATAGCCAGAAATGCTTCAACAA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp CATGCTGATGTAATTGTTGACCATCTTAAACACATACCCTCGGTCCATAAATGTCAGACTTGTTGCTATTaGGATGTTGTACTCTTGAGA +
Preference number: 4 (lower is better)
Translates to: HADVIVDHLKHIPSVHKCQTCCY*DVVLLR
Trigger: TCTCAAGAGTACAACATCCCAATAGCAACAAGTCTG...ACATTTATGGACCGAGGGTATGTGTTTAAGATGGTCAACAATTACATCAGCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTATAAACTTGCTATCTaGGCCTGCTTTCTTGGCTCT +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTYKLAI*ACFLGS
Trigger: AGAGCCAAGAAAGCAGGCCCAGATAGCAAGTTTATA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TATTTCCAAATCACATGGTCGGATAGGACCATGACAAGATTGTCCAATTCATTTTATAAACTTGCTATCTaGGCCTGCTTTCTTGGCTCT +
Preference number: 4 (lower is better)
Translates to: YFQITWSDRTMTRLSNSFYKLAI*ACFLGS
Trigger: AGAGCCAAGAAAGCAGGCCCAGATAGCAAGTTTATA...AAATGAATTGGACAATCTTGTCATGGTCCTATCCGACCATGTGATTTGGAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp CATGCTGATGTAATTGTTGACCATCTTAAACACATACCCTCGGTCCATAAATGTCTTCAGATAAATCCTTaGCATATTGTCCAGGAGCAT +
Preference number: 4 (lower is better)
Translates to: HADVIVDHLKHIPSVHKCLQINP*HIVQEH
Trigger: ATGCTCCTGGACAATATGCCAAGGATTTATCTGAAG...ACATTTATGGACCGAGGGTATGTGTTTAAGATGGTCAACAATTACATCAGCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCGCTCTGGAGTCAGCATaGTTTACTGTAGAAATAGCT +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTALESA*FTVEIA
Trigger: AGCTATTTCTACAGTAAACCATGCTGACTCCAGAGC...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000645028.1
CDS-3UTR CCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTTGCTAAAGATGCTCTaGAGTCAGCATGGTTTACTG +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTLLKML*SQHGLL
Trigger: CAGTAAACCATGCTGACTCCAGAGCATCTTTAGCAA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp CATGCTGATGTAATTGTTGACCATCTTAAACACATACCCTCGGTCCATAAATGTCATTGGTACTTGGATTaGAGTCAAGACTTGCTAAAG +
Preference number: 4 (lower is better)
Translates to: HADVIVDHLKHIPSVHKCHWYLD*SQDLLK
Trigger: CTTTAGCAAGTCTTGACTCCAATCCAAGTACCAATG...ACATTTATGGACCGAGGGTATGTGTTTAAGATGGTCAACAATTACATCAGCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCCACTGCTCTTCTCATTaGTACTTGGATTGGAGTCAA +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTHCSSH*YLDWSQ
Trigger: TTGACTCCAATCCAAGTACCAATGAGAAGAGCAGTG...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCCAAAGACAAGGGTCTTaGGATCTTTTCACAGTTGTC +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTQRQGS*DLFTVV
Trigger: GACAACTGTGAAAAGATCCCAAGACCCTTGTCTTTG...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TATTTCCAAATCACATGGTCGGATAGGACCATGACAAGATTGTCCAATTCATTTCAAAGACAAGGGTCTTaGGATCTTTTCACAGTTGTC +
Preference number: 4 (lower is better)
Translates to: YFQITWSDRTMTRLSNSFQRQGS*DLFTVV
Trigger: GACAACTGTGAAAAGATCCCAAGACCCTTGTCTTTG...AAATGAATTGGACAATCTTGTCATGGTCCTATCCGACCATGTGATTTGGAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTTTCATTGGAGTTGCTaGTCATGGTATTGTCTAACA +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGFHWSC*SWYCLT
Trigger: TGTTAGACAATACCATGACCAGCAACTCCAATGAAA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCACATGCTTCCTCCACTaGGAGTTGTTAGTAATGAGT +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTTCFLH*ELLVMS
Trigger: ACTCATTACTAACAACTCCCAGTGGAGGAAGCATGT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCAGCTTGAGTAATCTTTaGGAAATCTCGGACAGACCT +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTSLSNL*EISDRP
Trigger: AGGTCTGTCCGAGATTTCCCAAAGATTACTCAAGCT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCAAGCGGTTGATGTTGTaGTGCATTTCGAAATCTGTC +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTKRLML*CISKSV
Trigger: GACAGATTTCGAAATGCACCACAACATCAACCGCTT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTAGTTCTGTGCTCGATTaGCTAATTACTTGTATTCTC +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGSSVLD*LITCIL
Trigger: GAGAATACAAGTAATTAGCCAATCGAGCACAGAACT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCGGCAAATATTCAACCTaGCTTGATCAACACTGCTCA +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTGKYST*LDQHCS
Trigger: TGAGCAGTGTTGATCAAGCCAGGTTGAATATTTGCC...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TATTTCCAAATCACATGGTCGGATAGGACCATGACAAGATTGTCCAATTCATTTGCTCTGGAGTCAGCATaGTTTACTGCTATGGAATTT +
Preference number: 4 (lower is better)
Translates to: YFQITWSDRTMTRLSNSFALESA*FTAMEF
Trigger: AAATTCCATAGCAGTAAACCATGCTGACTCCAGAGC...AAATGAATTGGACAATCTTGTCATGGTCCTATCCGACCATGTGATTTGGAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CAA 72 bp TTTGAGTTGAGGGCTTTACAGATGATCATGATTCTCTaGGCAGCTTTTTCTTCAAATGGTTTGATCACAGAC +
Preference number: 4 (lower is better)
Translates to: FELRALQMIMIL*AAFSSNGLITD
Trigger: GTCTGTGATCAAACCATTTGAAGAAAAAGCTGCCAAGAGAATCATGATCATCTGTAAAGCCCTCAACTCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CAA 72 bp CCACTTGCAATGTTTCCCATCAAGACTTTTTCGATTTaGGCCACCAAAACAATTTCAGAATGTGGATTGCTT +
Preference number: 4 (lower is better)
Translates to: PLAMFPIKTFSI*ATKTISECGLL
Trigger: AAGCAATCCACATTCTGAAATTGTTTTGGTGGCCAAAATCGAAAAAGTCTTGATGGGAAACATTGCAAGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644695.1
3UTR CAA 72 bp AATTGCCTGAAGATCTCCTTCAAAAGCTTTACTTGGTaGTCAGGGTACTTCTTTGCATTGGTTTCTTCAAGA +
Preference number: 4 (lower is better)
Translates to: NCLKISFKSFTW*SGYFFALVSSR
Trigger: TCTTGAAGAAACCAATGCAAAGAAGTACCCTGACAACCAAGTAAAGCTTTTGAAGGAGATCTTCAGGCAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCAATCTCAAAGGAATGTaGAGGAAGCTTCTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTNLKGM*RKLLWF
Trigger: AAACCAGAGAAGCTTCCTTCACATTCCTTTGAGATT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTATCTTCTGTTTCTGTaGGGTACTTTGCAAAGTCTG +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTYLLFL*GTLQSL
Trigger: CAGACTTTGCAAAGTACCTCACAGAAACAGAAGATA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCGTTGTCCTTAAATACTaGTCTTACTGCCCAAGCAAA +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTVVLKY*SYCPSK
Trigger: TTTGCTTGGGCAGTAAGATCAGTATTTAAGGACAAC...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTTTGAGGTAGGTGACTaGGACATATCTTTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTFEVGD*DISFSL
Trigger: AAGAGAGAAAGATATGTCTCAGTCACCTACCTCAAA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCCACGAACTTAATATATaGCTGGACAGAATGATCCAG +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTHELNI*LDRMIQ
Trigger: CTGGATCATTCTGTCCAGTCATATATTAAGTTCGTG...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCCAAAATTCTTCCTCATaGAAAAGTACAGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTQNSSS*KSTEGL
Trigger: CAGCCCTTCTGTACTTTTTCATGAGGAAGAATTTTG...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCATATTCAACCTGGCTTaGTCAACACTGCTCAAAGAA +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTIFNLA*STLLKE
Trigger: TTCTTTGAGCAGTGTTGATCAAGCCAGGTTGAATAT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp CATGCTGATGTAATTGTTGACCATCTTAAACACATACCCTCGGTCCATAAATGTCTATTTCATTGGAGTTaGTGGTCATGGTATTGTCTA +
Preference number: 4 (lower is better)
Translates to: HADVIVDHLKHIPSVHKCLFHWS*WSWYCL
Trigger: TAGACAATACCATGACCAGCAACTCCAATGAAATAG...ACATTTATGGACCGAGGGTATGTGTTTAAGATGGTCAACAATTACATCAGCATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR GCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTTGTTAGTAATGAGTTaGTATCACAGGGGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTLLVMS*YHRGGY
Trigger: ATACCCACCCCTGTGATAGCAACTCATTACTAACAA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCCATGCATCTGCAAATTaGCTGAAGATCTCCTTCAAA +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTHASAN*LKISFK
Trigger: TTTGAAGGAGATCTTCAGGCAATTTGCAGATGCATG...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTTCCCCGAGATTAGCTaGAAATTCAGAAAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTFPEIS*KFRKFS
Trigger: AGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTTATCAGCATCTTCATaGTCAATCTCAAAGGAATGT +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGLSASS*SISKEC
Trigger: ACATTCCTTTGAGATTGACCATGAAGATGCTGATAA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTATACTTGTTGGAGTCTaGGTTCTTAATATAAGGTTC +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGILVGV*VLNIRF
Trigger: GAACCTTATATTAAGAACCCAGACTCCAACAAGTAT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCCTGTCCACATTTCCCTaGTTGTCCTTAAATACTGAT +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTLSTFP*LSLNTD
Trigger: ATCAGTATTTAAGGACAACCAGGGAAATGTGGACAG...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCATATGGTGTTTCTCATaGAGTTGTGTTGGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTIWCFS*SCVGSS
Trigger: TGAGCTACCAACACAACTCCATGAGAAACACCATAT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCCAGACTTGTTGCTATTaGGATGTTGTACTCTTGAGA +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTQTCCY*DVVLLR
Trigger: TCTCAAGAGTACAACATCCCAATAGCAACAAGTCTG...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTATTTCCAAATCACATaGTCGGATAGGACCATGACA +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTYFQIT*SDRTMT
Trigger: TGTCATGGTCCTATCCGACCATGTGATTTGGAAATA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCCATTGGTACTTGGATTaGAGTCAAGACTTGCTAAAG +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTHWYLD*SQDLLK
Trigger: CTTTAGCAAGTCTTGACTCCAATCCAAGTACCAATG...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCAGAGTTCCATTGTTCTaGGTGGACTGCACAAATTTA +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTRVPLF*VDCTNL
Trigger: TAAATTTGTGCAGTCCACCCAGAACAATGGAACTCT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTGGAGTTGCTGGTCATaGTATTGTCTAACATCTGTA +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTWSCWS*YCLTSV
Trigger: TACAGATGTTAGACAATACCATGACCAGCAACTCCA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTATGGATGTAACACATaGCAGCCTCAGATAAATCTC +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTYGCNT*QPQINL
Trigger: GAGATTTATCTGAGGCTGCCATGTGTTACATCCATA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCAATTGCCACTTCAATTaGATTCAGTTCTGTGCTCGA +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTNCHFN*IQFCAR
Trigger: TCGAGCACAGAACTGAATCCAATTGAAGTGGCAATT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TATTTCCAAATCACATGGTCGGATAGGACCATGACAAGATTGTCCAATTCATTTAATTGCCACTTCAATTaGATTCAGTTCTGTGCTCGA +
Preference number: 4 (lower is better)
Translates to: YFQITWSDRTMTRLSNSFNCHFN*IQFCAR
Trigger: TCGAGCACAGAACTGAATCCAATTGAAGTGGCAATT...AAATGAATTGGACAATCTTGTCATGGTCCTATCCGACCATGTGATTTGGAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp ATCTCTAGACCCCTGATTAGATGTATTGACAGTAAAAGGATACAGGTCCTTCAGTTCAAAAGCTTTACTTaGTTGTCAGGGTACTTCTTT +
Preference number: 4 (lower is better)
Translates to: ISRPLIRCIDSKRIQVLQFKSFT*LSGYFF
Trigger: AAAGAAGTACCCTGACAACCAAGTAAAGCTTTTGAA...CTGAAGGACCTGTATCCTTTTACTGTCAATACATCTAATCAGGGGTCTAGAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CCA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTTCAAAAGCTTTACTTaGTTGTCAGGGTACTTCTTT +
Preference number: 4 (lower is better)
Translates to: LSFSSPRLAANSESSLRGFKSFT*LSGYFF
Trigger: AAAGAAGTACCCTGACAACCAAGTAAAGCTTTTGAA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCCTGTGGATTTCTTCTTaGTTTACTCTCCTCACAGTT +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTLWISS*FTLLTV
Trigger: AACTGTGAGGAGAGTAAACCAAGAAGAAATCCACAG...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409592.7
3UTR CAA 72 bp TTGCTGGTCATGGTATTGTCTAACATCTGTAAGAGTTaGGGGTTAGAAAGTGCATTTTTGCCTCGAATTATA +
Preference number: 4 (lower is better)
Translates to: LLVMVLSNICKS*GLESAFLPRII
Trigger: TATAATTCGAGGCAAAAATGCACTTTCTAACCCCAAACTCTTACAGATGTTAGACAATACCATGACCAGCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR TCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCAGGTATCTGAAATTTTaGAGACAAACGTCCAAGATG +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTRYLKF*RQTSKM
Trigger: CATCTTGGACGTTTGTCTTCAAAATTTCAGATACCT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR TCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCGACCCTTTTCATCAATaGATTTTGACAGTCACATTG +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTDPFHQ*ILTVTL
Trigger: CAATGTGACTGTCAAAATTCATTGATGAAAAGGGTC...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCCTATTTCATTGGAGTTaGTGGTCATGGTATTGTCTA +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTLFHWS*WSWYCL
Trigger: TAGACAATACCATGACCAGCAACTCCAATGAAATAG...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTCTTTTCAGATACTCTaGAATGAGAGCAGCAATATG +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTSFQIL*NESSNM
Trigger: CATATTGCTGCTCTCATTGCAGAGTATCTGAAAAGA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTTTCATTGGAGTTGCTaGTCATGGTATTGTCTAACA +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTFHWSC*SWYCLT
Trigger: TGTTAGACAATACCATGACCAGCAACTCCAATGAAA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCAGTTCTGTGCTCGATTaGCTAATTACTTGTATTCTC +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTSSVLD*LITCIL
Trigger: GAGAATACAAGTAATTAGCCAATCGAGCACAGAACT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCGGTACTTCTTTGCATTaGTTTCTTCAAGAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTGTSLH*FLQEKL
Trigger: GAGCTTTTCTTGAAGAAACCAATGCAAAGAAGTACC...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR GCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTTTGGGGTTAGAAAGTaGATTTTTGCCTCGAATTAT +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTFGVRK*IFASNY
Trigger: ATAATTCGAGGCAAAAATGCACTTTCTAACCCCAAA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CCA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCAAATGCATTCACATGTaGATCCTGAGTATTTACTGT +
Preference number: 4 (lower is better)
Translates to: FRGWQNSEASEVNKNINTKCIHM*ILSIYC
Trigger: ACAGTAAATACTCAGGATCCACATGTGAATGCATTT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS GCA 90 bp TGCTGCCGGCTGCTGACTGCCACCGCGGCGGCGGACGCGGCGCTGTaGCGGAGCTCGGCCGCCTGCCCAGGTCTCAACAGGCTCCGGGTG +
Preference number: 5 (lower is better)
Translates to: CCRLLTATAAADAAL*RSSAACPGLNRLRV
Trigger: CACCCGGAGCCTGTTGAGACCTGGGCAGGCGGCCGAGCTCCGGCACAGCGCCGCGTCCGCCGCCGCGGTGGCAGTCAGCAGCCGGCAGCA
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000435582.1
ENST00000458608.1
ENST00000492369.5
CDS TCA 90 bp TGTGCCGGAGCTCGGCCGCCTGCCCAGGTCTCAACAGGCTCCGGGTaGACCTGCGGGTCCGCTCACCGGCCATCGCCGGTCACGCCAATC +
Preference number: 5 (lower is better)
Translates to: CAGARPPAQVSTGSG*TCGSAHRPSPVTPI
Trigger: GATTGGCGTGACCGGCGATGGCCGGTGAGCGGACCCGCAGGTTCACCCGGAGCCTGTTGAGACCTGGGCAGGCGGCCGAGCTCCGGCACA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258390.12
ENST00000435582.1
ENST00000492369.5
CDS CCA 90 bp GTGGGTAGGGCCGGAGTTGCTTTGCTAATTACTCGAGTGCAGGTTTaGTCCACTCCGCGCTTTGACAGGTCGTCCCTGCCCGTAATCTGC +
Preference number: 5 (lower is better)
Translates to: VGRAGVALLITRVQV*STPRFDRSSLPVIC
Trigger: GCAGATTACGGGCAGGGACGACCTGTCAAAGCGCGGAGTGGACCAAACCTGCACTCGAGTAATTAGCAAAGCAACTCCGGCCCTACCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000645028.1
CDS-3UTR CAA 90 bp GCAGGAAGTTTGAGGAAGGATTGTTTTGCTGTAACGTGTGGCCGCCCCAGCCTCCCAGCCTCAGTGAGGTaGCTTTCGCGGAAGCATCTA +
Preference number: 5 (lower is better)
Translates to: AGSLRKDCFAVTCGRPSLPASVR*LSRKHL
Trigger: TAGATGCTTCCGCGAAAGCAACCTCACTGAGGCTGG...GAGGCTGGGGCGGCCACACGTTACAGCAAAACAATCCTTCCTCAAACTTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458608.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATAGGATCGTCCGCCGCTaGCACTGCTCCGCCACCCCA +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDRIVRR*HCSATP
Trigger: TGGGGTGGCGGAGCAGTGCAAGCGGCGGACGATCCT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATGGTCCACTCCGCGCTTaGACAGGTCGTCCCTGCCCG +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDGPLRA*TGRPCP
Trigger: CGGGCAGGGACGACCTGTCAAAGCGCGGAGTGGACC...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS TCA 90 bp CTACAAATGTGTGGACAGCTCCTCTGGACCACAGAACGAAAAGCTTaGAGCAGAACAATGCTGGCAGTGCAGCCCATCGCTGCATCCTGG +
Preference number: 5 (lower is better)
Translates to: LQMCGQLLWTTERKA*SRTMLAVQPIAASW
Trigger: CCAGGATGCAGCGATGGGCTGCACTGCCAGCATTGTTCTGCTTCAAGCTTTTCGTTCTGTGGTCCAGAGGAGCTGTCCACACATTTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTGTGCTCCTCCTCCCTaGGAGGGGCCCCTCAGGACT +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDCAPPP*EGPLRT
Trigger: AGTCCTGAGGGGCCCCTCCAAGGGAGGAGGAGCACA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CACCTCTGGGCTGGGAGCTCTCTGCCAGTAGGCAATCAGAGTCTCGTACGAAATTGCTCCAAGGGAACGTaGTCAACAGCAATATCCAGG +
Preference number: 5 (lower is better)
Translates to: HLWAGSSLPVGNQSLVRNCSKGT*STAISR
Trigger: CCTGGATATTGCTGTTGACAACGTTCCCTTGGAGCA...ATTTCGTACGAGACTCTGATTGCCTACTGGCAGAGAGCTCCCAGCCCAGAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp CACCTCTGGGCTGGGAGCTCTCTGCCAGTAGGCAATCAGAGTCTCGTACGAAATGGGGCATGTATAAACTaGCTATCTGGGCCTGCTTTC +
Preference number: 5 (lower is better)
Translates to: HLWAGSSLPVGNQSLVRNGACIN*LSGPAF
Trigger: GAAAGCAGGCCCAGATAGCAAGTTTATACATGCCCC...ATTTCGTACGAGACTCTGATTGCCTACTGGCAGAGAGCTCCCAGCCCAGAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS TCA 90 bp TGCTTTGCTAATTACTCGAGTGCAGGTTTGGTCCACTCCGCGCTTTaGCAGGTCGTCCCTGCCCGTAATCTGCTCATTCATGACTGTGGA +
Preference number: 5 (lower is better)
Translates to: CFANYSSAGLVHSAL*QVVPARNLLIHDCG
Trigger: TCCACAGTCATGAATGAGCAGATTACGGGCAGGGACGACCTGTCAAAGCGCGGAGTGGACCAAACCTGCACTCGAGTAATTAGCAAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000645028.1
CDS GCA 90 bp GACAGCTCCTCTGGACCACAGAACGAAAAGCTTGAAGCAGAACAATaGTGGCAGTGCAGCCCATCGCTGCATCCTGGAGCCTACAAAATA +
Preference number: 5 (lower is better)
Translates to: DSSSGPQNEKLEAEQ*WQCSPSLHPGAYKI
Trigger: TATTTTGTAGGCTCCAGGATGCAGCGATGGGCTGCACTGCCAGCATTGTTCTGCTTCAAGCTTTTCGTTCTGTGGTCCAGAGGAGCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATACCCCACCGTGCTTCTaGCCCGACAGCGTGAAGGGT +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDTPPCF*PDSVKG
Trigger: ACCCTTCACGCTGTCGGGCAAGAAGCACGGTGGGGT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTAGGATCGTCCGCCGCTaGCACTGCTCCGCCACCCCA +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGRIVRR*HCSATP
Trigger: TGGGGTGGCGGAGCAGTGCAAGCGGCGGACGATCCT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CACCTCTGGGCTGGGAGCTCTCTGCCAGTAGGCAATCAGAGTCTCGTACGAAATAGCTCAGAAACCTTCTaGGACATCTCGTCAATTGCC +
Preference number: 5 (lower is better)
Translates to: HLWAGSSLPVGNQSLVRNSSETF*DISSIA
Trigger: GGCAATTGACGAGATGTCCAAGAAGGTTTCTGAGCT...ATTTCGTACGAGACTCTGATTGCCTACTGGCAGAGAGCTCCCAGCCCAGAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGTCCACTCCGCGCTTaGACAGGTCGTCCCTGCCCG +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGGPLRA*TGRPCP
Trigger: CGGGCAGGGACGACCTGTCAAAGCGCGGAGTGGACC...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS CCA 90 bp AGCTCCTCTGGACCACAGAACGAAAAGCTTGAAGCAGAACAATGCTaGCAGTGCAGCCCATCGCTGCATCCTGGAGCCTACAAAATAACT +
Preference number: 5 (lower is better)
Translates to: SSSGPQNEKLEAEQC*QCSPSLHPGAYKIT
Trigger: AGTTATTTTGTAGGCTCCAGGATGCAGCGATGGGCTGCACTGCCAGCATTGTTCTGCTTCAAGCTTTTCGTTCTGTGGTCCAGAGGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATAAGCCTAGGCTTTTCTaGCCGCTGCTGCTGCCGGCT +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDKPRLF*PLLLPA
Trigger: AGCCGGCAGCAGCAGCGGCAAGAAAAGCCTAGGCTT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258390.12
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTGTGCTCCTCCTCCCTaGGAGGGGCCCCTCAGGACT +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGCAPPP*EGPLRT
Trigger: AGTCCTGAGGGGCCCCTCCAAGGGAGGAGGAGCACA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp ACACACATGTATAGCTGCTCCACCAGGATATTCTCATTGTATGGTGTATCTTGCACCCCACCGTGCTTCTaGCCCGACAGCGTGAAGGGT +
Preference number: 5 (lower is better)
Translates to: THMYSCSTRIFSLYGVSCTPPCF*PDSVKG
Trigger: ACCCTTCACGCTGTCGGGCAAGAAGCACGGTGGGGT...GCAAGATACACCATACAATGAGAATATCCTGGTGGAGCAGCTATACATGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATGGAACAGGTGACTCGTaGTCAGGATCGTCCGCCGCT +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDGTGDS*SGSSAA
Trigger: AGCGGCGGACGATCCTGACAACGAGTCACCTGTTCC...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp GGAAGTTTGAGGAAGGATTGTTTTGCTGTAACGTGTGGCCGCCCCAGCCTCAGTGGTGCTGCAGGAAGTTaGAGGAAGGATTGTTTTGCT +
Preference number: 5 (lower is better)
Translates to: GSLRKDCFAVTCGRPSLSGAAGS*RKDCFA
Trigger: AGCAAAACAATCCTTCCTCAAACTTCCTGCAGCACC...ACTGAGGCTGGGGCGGCCACACGTTACAGCAAAACAATCCTTCCTCAAACTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458608.1
CDS CCA 90 bp TCATCGTCACTTTCCAGAGGCAAAATTTCGTGGGATGGTTCCTCTTaGCGTCGTCTACAAATGTGTGGACAGCTCCTCTGGACCACAGAA +
Preference number: 5 (lower is better)
Translates to: SSSLSRGKISWDGSS*RRLQMCGQLLWTTE
Trigger: TTCTGTGGTCCAGAGGAGCTGTCCACACATTTGTAGACGACGCCAAGAGGAACCATCCCACGAAATTTTGCCTCTGGAAAGTGACGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CATGCTGATGTAATTGTTGACCATCTTAAACACATACCCTCGGTCCATAAATGTTGTGCTCCTCCTCCCTaGGAGGGGCCCCTCAGGACT +
Preference number: 5 (lower is better)
Translates to: HADVIVDHLKHIPSVHKCCAPPP*EGPLRT
Trigger: AGTCCTGAGGGGCCCCTCCAAGGGAGGAGGAGCACA...ACATTTATGGACCGAGGGTATGTGTTTAAGATGGTCAACAATTACATCAGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp CACCTCTGGGCTGGGAGCTCTCTGCCAGTAGGCAATCAGAGTCTCGTACGAAATGTTATATTCCGTGCCTaGTTGAAGCATTTCTGGCTA +
Preference number: 5 (lower is better)
Translates to: HLWAGSSLPVGNQSLVRNVIFRA*LKHFWL
Trigger: TAGCCAGAAATGCTTCAACAAGGCACGGAATATAAC...ATTTCGTACGAGACTCTGATTGCCTACTGGCAGAGAGCTCCCAGCCCAGAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp GTCCGTCTTCTCACTGCTCTTCTCATTGGTACTTGGATTGGAGTCAAGACTTGCTGTACAGTCCTCTCCTaGCATGCCCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: VRLLTALLIGTWIGVKTCCTVLS*HALVLN
Trigger: GTTCAAGACCAGGGCATGCAAGGAGAGGACTGTACA...GCAAGTCTTGACTCCAATCCAAGTACCAATGAGAAGAGCAGTGAGAAGACGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp GCCAGTTCCTCATGTACAGTCCTCTCCTTGCATGCCCTGGTCTTGAACACGAACGAAGGATTGGATCCTTaGAGAGTTCCATTGTTCTGG +
Preference number: 5 (lower is better)
Translates to: ASSSCTVLSLHALVLNTNEGLDP*RVPLFW
Trigger: CCAGAACAATGGAACTCTCAAAGGATCCAATCCTTC...GTTCGTGTTCAAGACCAGGGCATGCAAGGAGAGGACTGTACATGAGGAACTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCGGTCCACTCCGCGCTTaGACAGGTCGTCCCTGCCCG +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTGPLRA*TGRPCP
Trigger: CGGGCAGGGACGACCTGTCAAAGCGCGGAGTGGACC...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS TCA 90 bp CTGTGGTGCCTCAGTGGAGGAAGGATTATAGTCACTCCTGGGTTGTaGCTACAAATAAGGCACTTGGCTATTTATTCTGACACCAGGGGG +
Preference number: 5 (lower is better)
Translates to: LWCLSGGRIIVTPGL*LQIRHLAIYSDTRG
Trigger: CCCCCTGGTGTCAGAATAAATAGCCAAGTGCCTTATTTGTAGTCACAACCCAGGAGTGACTATAATCCTTCCTCCACTGAGGCACCACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489831.1
CDS GCA 90 bp TCTGGACCACAGAACGAAAAGCTTGAAGCAGAACAATGCTGGCAGTaGAGCCCATCGCTGCATCCTGGAGCCTACAAAATAACTTCTATG +
Preference number: 5 (lower is better)
Translates to: SGPQNEKLEAEQCWQ*SPSLHPGAYKITSM
Trigger: CATAGAAGTTATTTTGTAGGCTCCAGGATGCAGCGATGGGCTGCACTGCCAGCATTGTTCTGCTTCAAGCTTTTCGTTCTGTGGTCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644695.1
ENST00000645028.1
CDS CCA 90 bp CTCTCCCTCCCTTGCTATGACGCTGCCTTAGGGCAAACGAATTCCTaGAGACTGCATGAATCTATCTTGATTTACTGCTGCCCAAACTTC +
Preference number: 5 (lower is better)
Translates to: LSLPCYDAALGQTNS*RLHESILIYCCPNF
Trigger: GAAGTTTGGGCAGCAGTAAATCAAGATAGATTCATGCAGTCTCCAGGAATTCGTTTGCCCTAAGGCAGCGTCATAGCAAGGGAGGGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492369.5
CDS CCA 90 bp CAAAATTTCGTGGGATGGTTCCTCTTGGCGTCGTCTACAAATGTGTaGACAGCTCCTCTGGACCACAGAACGAAAAGCTTGAAGCAGAAC +
Preference number: 5 (lower is better)
Translates to: QNFVGWFLLASSTNV*TAPLDHRTKSLKQN
Trigger: GTTCTGCTTCAAGCTTTTCGTTCTGTGGTCCAGAGGAGCTGTCCACACATTTGTAGACGACGCCAAGAGGAACCATCCCACGAAATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATCCCCTCAGGACTGATTaGCAGAATGCGGTTGAGGGT +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDPLRTD*QNAVEG
Trigger: ACCCTCAACCGCATTCTGCAAATCAGTCCTGAGGGG...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTGTGCTCCTCCTCCCTaGGAGGGGCCCCTCAGGACT +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTCAPPP*EGPLRT
Trigger: AGTCCTGAGGGGCCCCTCCAAGGGAGGAGGAGCACA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp GTCCGTCTTCTCACTGCTCTTCTCATTGGTACTTGGATTGGAGTCAAGACTTGCGTCTGGCAGGAAGGATaGGATCCTTTGAGAGTTCCA +
Preference number: 5 (lower is better)
Translates to: VRLLTALLIGTWIGVKTCVWQEG*DPLRVP
Trigger: TGGAACTCTCAAAGGATCCAATCCTTCCTGCCAGAC...GCAAGTCTTGACTCCAATCCAAGTACCAATGAGAAGAGCAGTGAGAAGACGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp GGTAAGATTCAGGAAATCTCTGAGGCCGGGGAAGCTGGATTTTATTTGTGTCAAGTAGTTCAGGAGTGCTaGCGTAGGAGTTTGCCAGGC +
Preference number: 5 (lower is better)
Translates to: GKIQEISEAGEAGFYLCQVVQEC*RRSLPG
Trigger: GCCTGGCAAACTCCTACGCAAGCACTCCTGAACTAC...TTGACACAAATAAAATCCAGCTTCCCCGGCCTCAGAGATTTCCTGAATCTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp GCCAGTTCCTCATGTACAGTCCTCTCCTTGCATGCCCTGGTCTTGAACACGAACTTCCTCCACTGGGAGTaGTTAGTAATGAGTTGCTAT +
Preference number: 5 (lower is better)
Translates to: ASSSCTVLSLHALVLNTNFLHWE*LVMSCY
Trigger: ATAGCAACTCATTACTAACAACTCCCAGTGGAGGAA...GTTCGTGTTCAAGACCAGGGCATGCAAGGAGAGGACTGTACATGAGGAACTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGAACAGGTGACTCGTaGTCAGGATCGTCCGCCGCT +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGGTGDS*SGSSAA
Trigger: AGCGGCGGACGATCCTGACAACGAGTCACCTGTTCC...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp ACTTTGTTGAATCGTAAACAAATTCTTCCACCTCCACTGTGGGTTCTGTTTGAGGGAACAGGTGACTCGTaGTCAGGATCGTCCGCCGCT +
Preference number: 5 (lower is better)
Translates to: TLLNRKQILPPPLWVLFEGTGDS*SGSSAA
Trigger: AGCGGCGGACGATCCTGACAACGAGTCACCTGTTCC...CTCAAACAGAACCCACAGTGGAGGTGGAAGAATTTGTTTACGATTCAACAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTCCAGCTGGTCCTCTTaGATGAGGCGCTCATTCACG +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDSSWSS*MRRSFT
Trigger: CGTGAATGAGCGCCTCATCAAAGAGGACCAGCTGGA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS GCA 90 bp GGCCATCAAAACAGTCCTTATACGCTTAGTCAGGTCCTTCACCTCTaGTGGGAAATTGCTGTTCTTTGGAAAAGAGAGAGCCTGGGTCAT +
Preference number: 5 (lower is better)
Translates to: GHQNSPYTLSQVLHL*WEIAVLWKRESLGH
Trigger: ATGACCCAGGCTCTCTCTTTTCCAAAGAACAGCAATTTCCCAGCAGAGGTGAAGGACCTGACTAAGCGTATAAGGACTGTTTTGATGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492251.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATGGAAGCTTCTCTGGTTaGTATTCTGCTCGGGGTAGC +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDGSFSG*YSARGS
Trigger: GCTACCCCGAGCAGAATACAAACCAGAGAAGCTTCC...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000645028.1
CDS-3UTR CAA 90 bp ACACACATGTATAGCTGCTCCACCAGGATATTCTCATTGTATGGTGTATCTTGCCCCCTCAGGACTGATTaGCAGAATGCGGTTGAGGGT +
Preference number: 5 (lower is better)
Translates to: THMYSCSTRIFSLYGVSCPLRTD*QNAVEG
Trigger: ACCCTCAACCGCATTCTGCAAATCAGTCCTGAGGGG...GCAAGATACACCATACAATGAGAATATCCTGGTGGAGCAGCTATACATGTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp GTCCGTCTTCTCACTGCTCTTCTCATTGGTACTTGGATTGGAGTCAAGACTTGCGTGATGGTGTCGATGTaGCCATTTTCCAAAGCCACA +
Preference number: 5 (lower is better)
Translates to: VRLLTALLIGTWIGVKTCVMVSM*PFSKAT
Trigger: TGTGGCTTTGGAAAATGGCAACATCGACACCATCAC...GCAAGTCTTGACTCCAATCCAAGTACCAATGAGAAGAGCAGTGAGAAGACGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp GCCAGTTCCTCATGTACAGTCCTCTCCTTGCATGCCCTGGTCTTGAACACGAACTTGCATGCCCTGGTCTaGAACACGAACTTAATATAT +
Preference number: 5 (lower is better)
Translates to: ASSSCTVLSLHALVLNTNLHALV*NTNLIY
Trigger: ATATATTAAGTTCGTGTTCAAGACCAGGGCATGCAA...GTTCGTGTTCAAGACCAGGGCATGCAAGGAGAGGACTGTACATGAGGAACTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTGTACAGTCCTCTCCTaGCATGCCCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDCTVLS*HALVLN
Trigger: GTTCAAGACCAGGGCATGCAAGGAGAGGACTGTACA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp GCCAGTTCCTCATGTACAGTCCTCTCCTTGCATGCCCTGGTCTTGAACACGAACTTGCTGGTCATGGTATaGTCTAACATCTGTAAGAGT +
Preference number: 5 (lower is better)
Translates to: ASSSCTVLSLHALVLNTNLLVMV*SNICKS
Trigger: ACTCTTACAGATGTTAGACAATACCATGACCAGCAA...GTTCGTGTTCAAGACCAGGGCATGCAAGGAGAGGACTGTACATGAGGAACTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCACCCCACCGTGCTTCTaGCCCGACAGCGTGAAGGGT +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTTPPCF*PDSVKG
Trigger: ACCCTTCACGCTGTCGGGCAAGAAGCACGGTGGGGT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATCACGCTGACACTTCCTaGCAGTTTGAGCTGCAGTCT +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDHADTS*QFELQS
Trigger: AGACTGCAGCTCAAACTGCAAGGAAGTGTCAGCGTG...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATAGGGCCGGAGTTGCTTaGCTAATTACTCGAGTGCAG +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDRAGVA*LITRVQ
Trigger: CTGCACTCGAGTAATTAGCAAAGCAACTCCGGCCCT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CGCCCCAGCCTCAGTGAGGTTGCTTTCGCGGAAGCATCTAGCATGATGCTCAAATCATCTCCCTCTGTTTaGAGCAAACATATTTTAGTG +
Preference number: 5 (lower is better)
Translates to: RPSLSEVAFAEASSMMLKSSPSV*SKHILV
Trigger: CACTAAAATATGTTTGCTCAAAACAGAGGGAGATGA...TTTGAGCATCATGCTAGATGCTTCCGCGAAAGCAACCTCACTGAGGCTGGGGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458608.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATGTGGGATGGTTCCTCTaGGCGTCGTCTACAAATGTG +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDVGWFL*ASSTNV
Trigger: CACATTTGTAGACGACGCCAAGAGGAACCATCCCAC...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCCATTGTGCAAAGCTGATTAAGCTCAGAAACCTTCTTGGACATCTCGTCAATTGCTCCTCATGGCACTaGGCCACAATGTCGGTCAGA +
Preference number: 5 (lower is better)
Translates to: FHCAKLIKLRNLLGHLVNCSSWH*ATMSVR
Trigger: TCTGACCGACATTGTGGCCAAGTGCCATGAGGAGCA...ATTGACGAGATGTCCAAGAAGGTTTCTGAGCTTAATCAGCTTTGCACAATGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTGCTCCTCATGGCACTaGGCCACAATGTCGGTCAGA +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGCSSWH*ATMSVR
Trigger: TCTGACCGACATTGTGGCCAAGTGCCATGAGGAGCA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTCTGGGCCTGCTTTCTaGGCTCTCTGTATCGATCAT +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDSGPAF*ALCIDH
Trigger: ATGATCGATACAGAGAGCCAAGAAAGCAGGCCCAGA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATGGGGCATGTATAAACTaGCTATCTGGGCCTGCTTTC +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDGACIN*LSGPAF
Trigger: GAAAGCAGGCCCAGATAGCAAGTTTATACATGCCCC...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATGGGATCTTTTCACAGTaGTCCGTCTTCTCACTGCTC +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDGIFSQ*SVFSLL
Trigger: GAGCAGTGAGAAGACGGACAACTGTGAAAAGATCCC...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGTAGTTCAGGAGTGCTaGCGTAGGAGTTTGCCAGGC +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGVVQEC*RRSLPG
Trigger: GCCTGGCAAACTCCTACGCAAGCACTCCTGAACTAC...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TGTTTCCTCTGGCGTGCATTCACAAGTTACAGAATTATCCAGCGAATCCAGACCTCGAAGACAAAGCGGTaGATGTTGTGGTGCATTTCG +
Preference number: 5 (lower is better)
Translates to: CFLWRAFTSYRIIQRIQTSKTKR*MLWCIS
Trigger: CGAAATGCACCACAACATCAACCGCTTTGTCTTCGA...GGTCTGGATTCGCTGGATAATTCTGTAACTTGTGAATGCACGCCAGAGGAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCGGAACAGGTGACTCGTaGTCAGGATCGTCCGCCGCT +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTGTGDS*SGSSAA
Trigger: AGCGGCGGACGATCCTGACAACGAGTCACCTGTTCC...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp GCACACAGTTATATTCCGTGCCTTGTTGAAGCATTTCTGGCTATCATACTTGAGAGGGCCGGAGTTGCTTaGCTAATTACTCGAGTGCAG +
Preference number: 5 (lower is better)
Translates to: AHSYIPCLVEAFLAIILERAGVA*LITRVQ
Trigger: CTGCACTCGAGTAATTAGCAAAGCAACTCCGGCCCT...CTCAAGTATGATAGCCAGAAATGCTTCAACAAGGCACGGAATATAACTGTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS CCA 90 bp CACAGGTATTGTCAGCTTCAATTTATAGCTGGGGACCCAGAGACATaGAGAAGAAACTTGTTCCAAGTCACAGTAAGTAGTGGCCTGATC +
Preference number: 5 (lower is better)
Translates to: HRYCQLQFIAGDPET*RRNLFQVTVSSGLI
Trigger: GATCAGGCCACTACTTACTGTGACTTGGAACAAGTTTCTTCTCCATGTCTCTGGGTCCCCAGCTATAAATTGAAGCTGACAATACCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492369.5
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATATTTGCAGAATGCGGTaGAGGGTGTGGATCCATTCA +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDICRMR*RVWIHS
Trigger: TGAATGGATCCACACCCTCAACCGCATTCTGCAAAT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp GTCAGGGTACTTCTTTGCATTGGTTTCTTCAAGAAAAGCTCGTGCATAGGCCATATTTGCAGAATGCGGTaGAGGGTGTGGATCCATTCA +
Preference number: 5 (lower is better)
Translates to: VRVLLCIGFFKKSSCIGHICRMR*RVWIHS
Trigger: TGAATGGATCCACACCCTCAACCGCATTCTGCAAAT...ATGGCCTATGCACGAGCTTTTCTTGAAGAAACCAATGCAAAGAAGTACCCTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATGTGATGGTGTCGATGTaGCCATTTTCCAAAGCCACA +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDVMVSM*PFSKAT
Trigger: TGTGGCTTTGGAAAATGGCAACATCGACACCATCAC...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATAAGGTTCGGCACCACTaGCAATGTTTCCCATCAAGA +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDKVRHH*QCFPSR
Trigger: TCTTGATGGGAAACATTGCAAGTGGTGCCGAACCTT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATGGAATGGTCTGCATTTaGCTTATTCTGTCGGCCCTT +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDGMVCI*LILSAL
Trigger: AAGGGCCGACAGAATAAGCAAAATGCAGACCATTCC...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCAGATAAATCCTTGGCATATTGTCCAGGAGCATGCCGTACAGGGGCATGTATAGCAGACTTGTTGCTATaGGGATGTTGTACTCTTGAG +
Preference number: 5 (lower is better)
Translates to: SDKSLAYCPGACRTGACIADLLL*GCCTLE
Trigger: CTCAAGAGTACAACATCCCAATAGCAACAAGTCTGC...TATACATGCCCCTGTACGGCATGCTCCTGGACAATATGCCAAGGATTTATCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTGTACAGTCCTCTCCTaGCATGCCCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGCTVLS*HALVLN
Trigger: GTTCAAGACCAGGGCATGCAAGGAGAGGACTGTACA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTGGCAACGCTGTGGTTaGCCCTTCTTGTTTCTTCAA +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDWQRCG*PFLFLQ
Trigger: TTGAAGAAACAAGAAGGGCAAACCACAGCGTTGCCA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATAATGTAAAGCAGCGCTaGAGAAATCTGGCAACGCTG +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDNVKQR*RNLATL
Trigger: CAGCGTTGCCAGATTTCTCAAGCGCTGCTTTACATT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCAGATAAATCCTTGGCATATTGTCCAGGAGCATGCCGTACAGGGGCATGTATAGTCACATTGTTGGAGTaGTCTCTGATGAGTCTGTGT +
Preference number: 5 (lower is better)
Translates to: SDKSLAYCPGACRTGACIVTLLE*SLMSLC
Trigger: ACACAGACTCATCAGAGACAACTCCAACAATGTGAC...TATACATGCCCCTGTACGGCATGCTCCTGGACAATATGCCAAGGATTTATCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTAGGCTTCTGTCTGAGTaGACCGTGACCTGTGGTTAC +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGRLLSE*TVTCGY
Trigger: GTAACCACAGGTCACGGTCAACTCAGACAGAAGCCT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCCATTGTGCAAAGCTGATTAAGCTCAGAAACCTTCTTGGACATCTCGTCAATAGGCTTCTGTCTGAGTaGACCGTGACCTGTGGTTAC +
Preference number: 5 (lower is better)
Translates to: FHCAKLIKLRNLLGHLVNRLLSE*TVTCGY
Trigger: GTAACCACAGGTCACGGTCAACTCAGACAGAAGCCT...ATTGACGAGATGTCCAAGAAGGTTTCTGAGCTTAATCAGCTTTGCACAATGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATAACTGGCTCACAGCTTaGATGAGTTGTAAGTGGGAC +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDNWLTA*MSCKWD
Trigger: GTCCCACTTACAACTCATCAAAGCTGTGAGCCAGTT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCAGATAAATCCTTGGCATATTGTCCAGGAGCATGCCGTACAGGGGCATGTATATCCTTGGGGTTTACCTaGTTGGAATCCTGGATTATC +
Preference number: 5 (lower is better)
Translates to: SDKSLAYCPGACRTGACISLGFT*LESWII
Trigger: GATAATCCAGGATTCCAACAAGGTAAACCCCAAGGA...TATACATGCCCCTGTACGGCATGCTCCTGGACAATATGCCAAGGATTTATCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTTGGGGTCCAAATCCTaGGGGTTTACCTTGTTGGAA +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDLGSKS*GFTLLE
Trigger: TTCCAACAAGGTAAACCCCAAGGATTTGGACCCCAA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATACACTTCCTTGCAGTTaGAGCTGCAGTCTGATCATG +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDTLPCS*SCSLIM
Trigger: CATGATCAGACTGCAGCTCAAACTGCAAGGAAGTGT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp GTCAGGGTACTTCTTTGCATTGGTTTCTTCAAGAAAAGCTCGTGCATAGGCCATACACTTCCTTGCAGTTaGAGCTGCAGTCTGATCATG +
Preference number: 5 (lower is better)
Translates to: VRVLLCIGFFKKSSCIGHTLPCS*SCSLIM
Trigger: CATGATCAGACTGCAGCTCAAACTGCAAGGAAGTGT...ATGGCCTATGCACGAGCTTTTCTTGAAGAAACCAATGCAAAGAAGTACCCTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp TTCCATTGTGCAAAGCTGATTAAGCTCAGAAACCTTCTTGGACATCTCGTCAATCACGCTGACACTTCCTaGCAGTTTGAGCTGCAGTCT +
Preference number: 5 (lower is better)
Translates to: FHCAKLIKLRNLLGHLVNHADTS*QFELQS
Trigger: AGACTGCAGCTCAAACTGCAAGGAAGTGTCAGCGTG...ATTGACGAGATGTCCAAGAAGGTTTCTGAGCTTAATCAGCTTTGCACAATGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp CATGCTGATGTAATTGTTGACCATCTTAAACACATACCCTCGGTCCATAAATGTTCCAGCTGGTCCTCTTaGATGAGGCGCTCATTCACG +
Preference number: 5 (lower is better)
Translates to: HADVIVDHLKHIPSVHKCSSWSS*MRRSFT
Trigger: CGTGAATGAGCGCCTCATCAAAGAGGACCAGCTGGA...ACATTTATGGACCGAGGGTATGTGTTTAAGATGGTCAACAATTACATCAGCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS TCA 90 bp AATTTCCAAGAGGCATTTCATACCTTAATATATGACTGGACAGAATaGTCCAGCTGCTCCTCATGGCACTTGGCCACAATGTCGGTCAGA +
Preference number: 5 (lower is better)
Translates to: NFQEAFHTLIYDWTE*SSCSSWHLATMSVR
Trigger: TCTGACCGACATTGTGGCCAAGTGCCATGAGGAGCAGCTGGATCATTCTGTCCAGTCATATATTAAGGTATGAAATGCCTCTTGGAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472652.1
CDS GCA 90 bp GGGCAAACGAATTCCTGGAGACTGCATGAATCTATCTTGATTTACTaGTGCCCAAACTTCCACATTTCTCCTTCCTACACCTACTCATCT +
Preference number: 5 (lower is better)
Translates to: GQTNSWRLHESILIY*CPNFHISPSYTYSS
Trigger: AGATGAGTAGGTGTAGGAAGGAGAAATGTGGAAGTTTGGGCAGCAGTAAATCAAGATAGATTCATGCAGTCTCCAGGAATTCGTTTGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492369.5
CDS CCA 90 bp CATCAAAACAGTCCTTATACGCTTAGTCAGGTCCTTCACCTCTGCTaGGAAATTGCTGTTCTTTGGAAAAGAGAGAGCCTGGGTCATTAT +
Preference number: 5 (lower is better)
Translates to: HQNSPYTLSQVLHLC*EIAVLWKRESLGHY
Trigger: ATAATGACCCAGGCTCTCTCTTTTCCAAAGAACAGCAATTTCCCAGCAGAGGTGAAGGACCTGACTAAGCGTATAAGGACTGTTTTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492251.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCCCCCTCAGGACTGATTaGCAGAATGCGGTTGAGGGT +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTPLRTD*QNAVEG
Trigger: ACCCTCAACCGCATTCTGCAAATCAGTCCTGAGGGG...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTGCTCCAAGGGAACGTaGTCAACAGCAATATCCAGG +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGCSKGT*STAISR
Trigger: CCTGGATATTGCTGTTGACAACGTTCCCTTGGAGCA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATACGATGTTACACAATTaGGATGCTCCAAGGGAACGT +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDTMLHN*DAPRER
Trigger: ACGTTCCCTTGGAGCATCCAAATTGTGTAACATCGT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCAGATAAATCCTTGGCATATTGTCCAGGAGCATGCCGTACAGGGGCATGTATATCTCATGGAGTTGTGTaGGTAGCTCAATTTTCACCT +
Preference number: 5 (lower is better)
Translates to: SDKSLAYCPGACRTGACISHGVV*VAQFSP
Trigger: AGGTGAAAATTGAGCTACCAACACAACTCCATGAGA...TATACATGCCCCTGTACGGCATGCTCCTGGACAATATGCCAAGGATTTATCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp TCAGATAAATCCTTGGCATATTGTCCAGGAGCATGCCGTACAGGGGCATGTATAAGAGCCTCCTTCTTTTaGGCATTAGCTTTTGCATTG +
Preference number: 5 (lower is better)
Translates to: SDKSLAYCPGACRTGACIRASFF*ALAFAL
Trigger: CAATGCAAAAGCTAATGCCAAAAAGAAGGAGGCTCT...TATACATGCCCCTGTACGGCATGCTCCTGGACAATATGCCAAGGATTTATCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTGGGATGTTGTACTCTaGAGAAGCTATCTGATCGTG +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDWDVVL*RSYLIV
Trigger: CACGATCAGATAGCTTCTCAAGAGTACAACATCCCA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTGCTCCTCATGGCACTaGGCCACAATGTCGGTCAGA +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTCSSWH*ATMSVR
Trigger: TCTGACCGACATTGTGGCCAAGTGCCATGAGGAGCA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATAAGGATCTGGAATGTTaGCTGATCTTATGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDKDLEC*LILWAD
Trigger: GTCTGCCCATAAGATCAGCAAACATTCCAGATCCTT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTCTGGGCCTGCTTTCTaGGCTCTCTGTATCGATCAT +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGSGPAF*ALCIDH
Trigger: ATGATCGATACAGAGAGCCAAGAAAGCAGGCCCAGA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGGCATGTATAAACTaGCTATCTGGGCCTGCTTTC +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGGACIN*LSGPAF
Trigger: GAAAGCAGGCCCAGATAGCAAGTTTATACATGCCCC...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATCCTTCAGATAAATCCTaGGCATATTGTCCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDPSDKS*AYCPGA
Trigger: TGCTCCTGGACAATATGCCAAGGATTTATCTGAAGG...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp GAAGAATCTGTTTCCTCTGGCGTGCATTCACAAGTTACAGAATTATCCAGCGAAGATAGCTGTCTGGCTTaGAAATCCTCCATTGGTGCT +
Preference number: 5 (lower is better)
Translates to: EESVSSGVHSQVTELSSEDSCLA*KSSIGA
Trigger: AGCACCAATGGAGGATTTCAAAGCCAGACAGCTATC...TTCGCTGGATAATTCTGTAACTTGTGAATGCACGCCAGAGGAAACAGATTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATGATTGGAGTCAAGACTaGCTAAAGATGCTCTGGAGT +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDDWSQD*LKMLWS
Trigger: ACTCCAGAGCATCTTTAGCAAGTCTTGACTCCAATC...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTCACTGCTCTTCTCATaGGTACTTGGATTGGAGTCA +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDSLLFS*VLGLES
Trigger: TGACTCCAATCCAAGTACCAATGAGAAGAGCAGTGA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGATCTTTTCACAGTaGTCCGTCTTCTCACTGCTC +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGGIFSQ*SVFSLL
Trigger: GAGCAGTGAGAAGACGGACAACTGTGAAAAGATCCC...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTCCTTTGAGAGTTCCATaGTTCTGGGTGGACTGCACA +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGPLRVP*FWVDCT
Trigger: TGTGCAGTCCACCCAGAACAATGGAACTCTCAAAGG...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGTCTGGCAGGAAGGATaGGATCCTTTGAGAGTTCCA +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGVWQEG*DPLRVP
Trigger: TGGAACTCTCAAAGGATCCAATCCTTCCTGCCAGAC...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATGTCACATTGTTGGAGTaGTCTCTGATGAGTCTGTGT +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDVTLLE*SLMSLC
Trigger: ACACAGACTCATCAGAGACAACTCCAACAATGTGAC...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATAATTGCAAGCGAATGTaGAAACCGAGAGCCTCCAAT +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDNCKRM*KPRASN
Trigger: ATTGGAGGCTCTCGGTTTCAACATTCGCTTGCAATT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCGTAGTTCAGGAGTGCTaGCGTAGGAGTTTGCCAGGC +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTVVQEC*RRSLPG
Trigger: GCCTGGCAAACTCCTACGCAAGCACTCCTGAACTAC...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATGTTGTTAGTAATGAGTaGCTATCACAGGGGTGGGTA +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDVVSNE*LSQGWV
Trigger: TACCCACCCCTGTGATAGCAACTCATTACTAACAAC...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp GTCAGGGTACTTCTTTGCATTGGTTTCTTCAAGAAAAGCTCGTGCATAGGCCATGCAATGATGGGCTTGTaGACATCAGCAATGAGTTCA +
Preference number: 5 (lower is better)
Translates to: VRVLLCIGFFKKSSCIGHAMMGL*TSAMSS
Trigger: TGAACTCATTGCTGATGTCAACAAGCCCATCATTGC...ATGGCCTATGCACGAGCTTTTCTTGAAGAAACCAATGCAAAGAAGTACCCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATACAGCAATGATGGGCTaGTTGACATCAGCAATGAGT +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDTAMMG*LTSAMS
Trigger: ACTCATTGCTGATGTCAACAAGCCCATCATTGCTGT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTCCTTGGGGTTTACCTaGTTGGAATCCTGGATTATC +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDSLGFT*LESWII
Trigger: GATAATCCAGGATTCCAACAAGGTAAACCCCAAGGA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCAGATAAATCCTTGGCATATTGTCCAGGAGCATGCCGTACAGGGGCATGTATAACAAAGCGGTTGATGTaGTGGTGCATTTCGAAATCT +
Preference number: 5 (lower is better)
Translates to: SDKSLAYCPGACRTGACITKRLM*WCISKS
Trigger: AGATTTCGAAATGCACCACAACATCAACCGCTTTGT...TATACATGCCCCTGTACGGCATGCTCCTGGACAATATGCCAAGGATTTATCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp GTCCGTCTTCTCACTGCTCTTCTCATTGGTACTTGGATTGGAGTCAAGACTTGCCAGTTCTGTGCTCGATaGGCTAATTACTTGTATTCT +
Preference number: 5 (lower is better)
Translates to: VRLLTALLIGTWIGVKTCQFCAR*ANYLYS
Trigger: AGAATACAAGTAATTAGCCAATCGAGCACAGAACTG...GCAAGTCTTGACTCCAATCCAAGTACCAATGAGAAGAGCAGTGAGAAGACGGAC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATCAATTGCCACTTCAATaGGATTCAGTTCTGTGCTCG +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDQLPLQ*DSVLCS
Trigger: CGAGCACAGAACTGAATCCAATTGAAGTGGCAATTG...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTCCAGCTGGTCCTCTTaGATGAGGCGCTCATTCACG +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTSSWSS*MRRSFT
Trigger: CGTGAATGAGCGCCTCATCAAAGAGGACCAGCTGGA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CATGCTGATGTAATTGTTGACCATCTTAAACACATACCCTCGGTCCATAAATGTGTGGGATGGTTCCTCTaGGCGTCGTCTACAAATGTG +
Preference number: 5 (lower is better)
Translates to: HADVIVDHLKHIPSVHKCVGWFL*ASSTNV
Trigger: CACATTTGTAGACGACGCCAAGAGGAACCATCCCAC...ACATTTATGGACCGAGGGTATGTGTTTAAGATGGTCAACAATTACATCAGCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS CCA 90 bp CACATACTGCTCATAACACAGGTATTGTCAGCTTCAATTTATAGCTaGGGACCCAGAGACATGGAGAAGAAACTTGTTCCAAGTCACAGT +
Preference number: 5 (lower is better)
Translates to: HILLITQVLSASIYS*GPRDMEKKLVPSHS
Trigger: ACTGTGACTTGGAACAAGTTTCTTCTCCATGTCTCTGGGTCCCCAGCTATAAATTGAAGCTGACAATACCTGTGTTATGAGCAGTATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492369.5
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATGAAGAACAAGAGATCTaGAAGAGGATCATTCCGGTA +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDEEQEI*KRIIPV
Trigger: TACCGGAATGATCCTCTTCAAGATCTCTTGTTCTTC...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATAGTAAATTTTCTGCCTaGTGCTCTGCATCTTCAGGT +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDSKFSA*CSASSG
Trigger: ACCTGAAGATGCAGAGCACAAGGCAGAAAATTTACT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCGGAAGCTTCTCTGGTTaGTATTCTGCTCGGGGTAGC +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTGSFSG*YSARGS
Trigger: GCTACCCCGAGCAGAATACAAACCAGAGAAGCTTCC...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000645028.1
CDS-3UTR CAA 90 bp GTCCGTCTTCTCACTGCTCTTCTCATTGGTACTTGGATTGGAGTCAAGACTTGCTCTCCATGTTTCGAGTaGTTTTTACAGTATCTTCTG +
Preference number: 5 (lower is better)
Translates to: VRLLTALLIGTWIGVKTCSPCFE*FLQYLL
Trigger: CAGAAGATACTGTAAAAACAACTCGAAACATGGAGA...GCAAGTCTTGACTCCAATCCAAGTACCAATGAGAAGAGCAGTGAGAAGACGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGTGATGGTGTCGATGTaGCCATTTTCCAAAGCCACA +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGVMVSM*PFSKAT
Trigger: TGTGGCTTTGGAAAATGGCAACATCGACACCATCAC...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTAAGGTTCGGCACCACTaGCAATGTTTCCCATCAAGA +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGKVRHH*QCFPSR
Trigger: TCTTGATGGGAAACATTGCAAGTGGTGCCGAACCTT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCCATTGTGCAAAGCTGATTAAGCTCAGAAACCTTCTTGGACATCTCGTCAATAAGGTTCGGCACCACTaGCAATGTTTCCCATCAAGA +
Preference number: 5 (lower is better)
Translates to: FHCAKLIKLRNLLGHLVNKVRHH*QCFPSR
Trigger: TCTTGATGGGAAACATTGCAAGTGGTGCCGAACCTT...ATTGACGAGATGTCCAAGAAGGTTTCTGAGCTTAATCAGCTTTGCACAATGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATCGGTATTTTCCCAATTaGCTGCAGAATTGTCTGTTG +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDRYFPN*LQNCLL
Trigger: CAACAGACAATTCTGCAGCAAATTGGGAAAATACCG...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGAATGGTCTGCATTTaGCTTATTCTGTCGGCCCTT +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGGMVCI*LILSAL
Trigger: AAGGGCCGACAGAATAAGCAAAATGCAGACCATTCC...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATGTTATATTCCGTGCCTaGTTGAAGCATTTCTGGCTA +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDVIFRA*LKHFWL
Trigger: TAGCCAGAAATGCTTCAACAAGGCACGGAATATAAC...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTCTCATGGAGTTGTGTaGGTAGCTCAATTTTCACCT +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDSHGVV*VAQFSP
Trigger: AGGTGAAAATTGAGCTACCAACACAACTCCATGAGA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATAGAGCCTCCTTCTTTTaGGCATTAGCTTTTGCATTG +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDRASFF*ALAFAL
Trigger: CAATGCAAAAGCTAATGCCAAAAAGAAGGAGGCTCT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATACAAATGTCGACACTTaGAAAAGTGGTTTGCCACCA +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDTNVDT*KSGLPP
Trigger: TGGTGGCAAACCACTTTTCAAAGTGTCGACATTTGT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTGTACAGTCCTCTCCTaGCATGCCCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTCTVLS*HALVLN
Trigger: GTTCAAGACCAGGGCATGCAAGGAGAGGACTGTACA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp GTCCGTCTTCTCACTGCTCTTCTCATTGGTACTTGGATTGGAGTCAAGACTTGCCTGTTGTTGAGTCATTaGATTTCAAAAGACCAGTCA +
Preference number: 5 (lower is better)
Translates to: VRLLTALLIGTWIGVKTCLLLSH*ISKDQS
Trigger: TGACTGGTCTTTTGAAATCAAATGACTCAACAACAG...GCAAGTCTTGACTCCAATCCAAGTACCAATGAGAAGAGCAGTGAGAAGACGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp ACTTTGTTGAATCGTAAACAAATTCTTCCACCTCCACTGTGGGTTCTGTTTGAGTGGCAACGCTGTGGTTaGCCCTTCTTGTTTCTTCAA +
Preference number: 5 (lower is better)
Translates to: TLLNRKQILPPPLWVLFEWQRCG*PFLFLQ
Trigger: TTGAAGAAACAAGAAGGGCAAACCACAGCGTTGCCA...CTCAAACAGAACCCACAGTGGAGGTGGAAGAATTTGTTTACGATTCAACAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTAATGTAAAGCAGCGCTaGAGAAATCTGGCAACGCTG +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGNVKQR*RNLATL
Trigger: CAGCGTTGCCAGATTTCTCAAGCGCTGCTTTACATT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CATGCTGATGTAATTGTTGACCATCTTAAACACATACCCTCGGTCCATAAATGTTCTGGGCCTGCTTTCTaGGCTCTCTGTATCGATCAT +
Preference number: 5 (lower is better)
Translates to: HADVIVDHLKHIPSVHKCSGPAF*ALCIDH
Trigger: ATGATCGATACAGAGAGCCAAGAAAGCAGGCCCAGA...ACATTTATGGACCGAGGGTATGTGTTTAAGATGGTCAACAATTACATCAGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp ACACACATGTATAGCTGCTCCACCAGGATATTCTCATTGTATGGTGTATCTTGCCCTTCAGATAAATCCTaGGCATATTGTCCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: THMYSCSTRIFSLYGVSCPSDKS*AYCPGA
Trigger: TGCTCCTGGACAATATGCCAAGGATTTATCTGAAGG...GCAAGATACACCATACAATGAGAATATCCTGGTGGAGCAGCTATACATGTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp TGTTTCCTCTGGCGTGCATTCACAAGTTACAGAATTATCCAGCGAATCCAGACCTCATTGGTACTTGGATaGGAGTCAAGACTTGCTAAA +
Preference number: 5 (lower is better)
Translates to: CFLWRAFTSYRIIQRIQTSLVLG*ESRLAK
Trigger: TTTAGCAAGTCTTGACTCCAATCCAAGTACCAATGA...GGTCTGGATTCGCTGGATAATTCTGTAACTTGTGAATGCACGCCAGAGGAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTCTTCTCATTGGTACTaGGATTGGAGTCAAGACTTG +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDSSHWY*DWSQDL
Trigger: CAAGTCTTGACTCCAATCCAAGTACCAATGAGAAGA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTCAAAGACAAGGGTCTaGGGATCTTTTCACAGTTGT +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDSKTRV*GSFHSC
Trigger: ACAACTGTGAAAAGATCCCAAGACCCTTGTCTTTGA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCAGATAAATCCTTGGCATATTGTCCAGGAGCATGCCGTACAGGGGCATGTATAATTTTGACAGTCACATaGTTGGAGTTGTCTCTGATG +
Preference number: 5 (lower is better)
Translates to: SDKSLAYCPGACRTGACIILTVT*LELSLM
Trigger: CATCAGAGACAACTCCAACAATGTGACTGTCAAAAT...TATACATGCCCCTGTACGGCATGCTCCTGGACAATATGCCAAGGATTTATCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATAACGCTGAAGGAAACTaGCATACAAACAGTCTCAAG +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDNAEGN*HTNSLK
Trigger: CTTGAGACTGTTTGTATGCAAGTTTCCTTCAGCGTT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCAGGCTTCTGTCTGAGTaGACCGTGACCTGTGGTTAC +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTRLLSE*TVTCGY
Trigger: GTAACCACAGGTCACGGTCAACTCAGACAGAAGCCT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTAACTGGCTCACAGCTTaGATGAGTTGTAAGTGGGAC +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGNWLTA*MSCKWD
Trigger: GTCCCACTTACAACTCATCAAAGCTGTGAGCCAGTT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCAGATAAATCCTTGGCATATTGTCCAGGAGCATGCCGTACAGGGGCATGTATACCATTGGCGAAATTATaGGTAATTGCAAGCGAATGT +
Preference number: 5 (lower is better)
Translates to: SDKSLAYCPGACRTGACIPLAKL*VIASEC
Trigger: ACATTCGCTTGCAATTACCAATAATTTCGCCAATGG...TATACATGCCCCTGTACGGCATGCTCCTGGACAATATGCCAAGGATTTATCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTTCCTCCACTGGGAGTaGTTAGTAATGAGTTGCTAT +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDFLHWE*LVMSCY
Trigger: ATAGCAACTCATTACTAACAACTCCCAGTGGAGGAA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp GAAGAATCTGTTTCCTCTGGCGTGCATTCACAAGTTACAGAATTATCCAGCGAAACAGCAATGATGGGCTaGTTGACATCAGCAATGAGT +
Preference number: 5 (lower is better)
Translates to: EESVSSGVHSQVTELSSETAMMG*LTSAMS
Trigger: ACTCATTGCTGATGTCAACAAGCCCATCATTGCTGT...TTCGCTGGATAATTCTGTAACTTGTGAATGCACGCCAGAGGAAACAGATTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTTGGGGTCCAAATCCTaGGGGTTTACCTTGTTGGAA +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGLGSKS*GFTLLE
Trigger: TTCCAACAAGGTAAACCCCAAGGATTTGGACCCCAA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATACAAAGCGGTTGATGTaGTGGTGCATTTCGAAATCT +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDTKRLM*WCISKS
Trigger: AGATTTCGAAATGCACCACAACATCAACCGCTTTGT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTCGAAGACAAAGCGGTaGATGTTGTGGTGCATTTCG +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGSKTKR*MLWCIS
Trigger: CGAAATGCACCACAACATCAACCGCTTTGTCTTCGA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp GCACACAGTTATATTCCGTGCCTTGTTGAAGCATTTCTGGCTATCATACTTGAGCAATTGCCACTTCAATaGGATTCAGTTCTGTGCTCG +
Preference number: 5 (lower is better)
Translates to: AHSYIPCLVEAFLAIILEQLPLQ*DSVLCS
Trigger: CGAGCACAGAACTGAATCCAATTGAAGTGGCAATTG...CTCAAGTATGATAGCCAGAAATGCTTCAACAAGGCACGGAATATAACTGTGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTAGCTCAGAAACCTTCTaGGACATCTCGTCAATTGCC +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGSSETF*DISSIA
Trigger: GGCAATTGACGAGATGTCCAAGAAGGTTTCTGAGCT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTACACTTCCTTGCAGTTaGAGCTGCAGTCTGATCATG +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGTLPCS*SCSLIM
Trigger: CATGATCAGACTGCAGCTCAAACTGCAAGGAAGTGT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCCACGCTGACACTTCCTaGCAGTTTGAGCTGCAGTCT +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTHADTS*QFELQS
Trigger: AGACTGCAGCTCAAACTGCAAGGAAGTGTCAGCGTG...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCAGATAAATCCTTGGCATATTGTCCAGGAGCATGCCGTACAGGGGCATGTATATGTCAGGGTACTTCTTaGCATTGGTTTCTTCAAGAA +
Preference number: 5 (lower is better)
Translates to: SDKSLAYCPGACRTGACICQGTS*HWFLQE
Trigger: TTCTTGAAGAAACCAATGCAAAGAAGTACCCTGACA...TATACATGCCCCTGTACGGCATGCTCCTGGACAATATGCCAAGGATTTATCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCAGGGCCGGAGTTGCTTaGCTAATTACTCGAGTGCAG +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTRAGVA*LITRVQ
Trigger: CTGCACTCGAGTAATTAGCAAAGCAACTCCGGCCCT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TGTTTCCTCTGGCGTGCATTCACAAGTTACAGAATTATCCAGCGAATCCAGACCAATATTCAACCTGGCTaGATCAACACTGCTCAAAGA +
Preference number: 5 (lower is better)
Translates to: CFLWRAFTSYRIIQRIQTNIQPG*INTAQR
Trigger: TCTTTGAGCAGTGTTGATCAAGCCAGGTTGAATATT...GGTCTGGATTCGCTGGATAATTCTGTAACTTGTGAATGCACGCCAGAGGAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS TCA 90 bp ATCTTCATCCTTATCAGCATCTTCATGGTCAATCTCAAAGGAATGTaGAGGAAGCTTCTCTGGTTTGTATTCGGGGTAGCTGTCGAATGT +
Preference number: 5 (lower is better)
Translates to: IFILISIFMVNLKGM*RKLLWFVFGVAVEC
Trigger: ACATTCGACAGCTACCCCGAATACAAACCAGAGAAGCTTCCTTCACATTCCTTTGAGATTGACCATGAAGATGCTGATAAGGATGAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTCATCTTCAGGTACTGTaGAGTACAACGTGCGGATAT +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGHLQVL*STTCGY
Trigger: ATATCCGCACGTTGTACTCAACAGTACCTGAAGATG...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTCGAACAGTAACGGTGTaGTTCACGGTGCTGTTAAAA +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGRTVTV*FTVLLK
Trigger: TTTTAACAGCACCGTGAACAACACCGTTACTGTTCG...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCCATTGTGCAAAGCTGATTAAGCTCAGAAACCTTCTTGGACATCTCGTCAATCGAACAGTAACGGTGTaGTTCACGGTGCTGTTAAAA +
Preference number: 5 (lower is better)
Translates to: FHCAKLIKLRNLLGHLVNRTVTV*FTVLLK
Trigger: TTTTAACAGCACCGTGAACAACACCGTTACTGTTCG...ATTGACGAGATGTCCAAGAAGGTTTCTGAGCTTAATCAGCTTTGCACAATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATATCTTTTGTGCATACTaGTTGGAGTCTGGGTTCTTA +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDIFCAY*LESGFL
Trigger: TAAGAACCCAGACTCCAACAAGTATGCACAAAAGAT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp GAAGAATCTGTTTCCTCTGGCGTGCATTCACAAGTTACAGAATTATCCAGCGAACGGTATTTTCCCAATTaGCTGCAGAATTGTCTGTTG +
Preference number: 5 (lower is better)
Translates to: EESVSSGVHSQVTELSSERYFPN*LQNCLL
Trigger: CAACAGACAATTCTGCAGCAAATTGGGAAAATACCG...TTCGCTGGATAATTCTGTAACTTGTGAATGCACGCCAGAGGAAACAGATTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTCCACATTTCCCTGGTaGTCCTTAAATACTGATCTT +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDSTFPW*SLNTDL
Trigger: AAGATCAGTATTTAAGGACAACCAGGGAAATGTGGA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATACAATGGTGAAAATCTaGAGTCTCTGTCCACATTTC +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDTMVKI*SLCPHF
Trigger: GAAATGTGGACAGAGACTCAAGATTTTCACCATTGT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTACGATGTTACACAATTaGGATGCTCCAAGGGAACGT +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGTMLHN*DAPRER
Trigger: ACGTTCCCTTGGAGCATCCAAATTGTGTAACATCGT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp ACACACATGTATAGCTGCTCCACCAGGATATTCTCATTGTATGGTGTATCTTGCATATTCCGTGCCTTGTaGAAGCATTTCTGGCTATCA +
Preference number: 5 (lower is better)
Translates to: THMYSCSTRIFSLYGVSCIFRAL*KHFWLS
Trigger: TGATAGCCAGAAATGCTTCAACAAGGCACGGAATAT...GCAAGATACACCATACAATGAGAATATCCTGGTGGAGCAGCTATACATGTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTATACACTTCAGGGGCTaGGCACTTTCTTCATCTGAA +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGIHFRG*ALSSSE
Trigger: TTCAGATGAAGAAAGTGCCAAGCCCCTGAAGTGTAT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCCATTGTGCAAAGCTGATTAAGCTCAGAAACCTTCTTGGACATCTCGTCAATATACACTTCAGGGGCTaGGCACTTTCTTCATCTGAA +
Preference number: 5 (lower is better)
Translates to: FHCAKLIKLRNLLGHLVNIHFRG*ALSSSE
Trigger: TTCAGATGAAGAAAGTGCCAAGCCCCTGAAGTGTAT...ATTGACGAGATGTCCAAGAAGGTTTCTGAGCTTAATCAGCTTTGCACAATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTGGGATGTTGTACTCTaGAGAAGCTATCTGATCGTG +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGWDVVL*RSYLIV
Trigger: CACGATCAGATAGCTTCTCAAGAGTACAACATCCCA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGCAGACTTGTTGCTATaGGGATGTTGTACTCTTGAG +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGADLLL*GCCTLE
Trigger: CTCAAGAGTACAACATCCCAATAGCAACAAGTCTGC...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATGAAGCTGGATTTTATTaGTGTCAATCAAGTGCTGTG +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDEAGFY*CQSSAV
Trigger: CACAGCACTTGATTGACACAAATAAAATCCAGCTTC...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTCTTCAAGTGCATCCTaGTATTTCCAAATCACATGG +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDSSSAS*YFQITW
Trigger: CCATGTGATTTGGAAATACAAGGATGCACTTGAAGA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp GTCAGGGTACTTCTTTGCATTGGTTTCTTCAAGAAAAGCTCGTGCATAGGCCATTCTTCAAGTGCATCCTaGTATTTCCAAATCACATGG +
Preference number: 5 (lower is better)
Translates to: VRVLLCIGFFKKSSCIGHSSSAS*YFQITW
Trigger: CCATGTGATTTGGAAATACAAGGATGCACTTGAAGA...ATGGCCTATGCACGAGCTTTTCTTGAAGAAACCAATGCAAAGAAGTACCCTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp CATGCTGATGTAATTGTTGACCATCTTAAACACATACCCTCGGTCCATAAATGTAATGTAAAGCAGCGCTaGAGAAATCTGGCAACGCTG +
Preference number: 5 (lower is better)
Translates to: HADVIVDHLKHIPSVHKCNVKQR*RNLATL
Trigger: CAGCGTTGCCAGATTTCTCAAGCGCTGCTTTACATT...ACATTTATGGACCGAGGGTATGTGTTTAAGATGGTCAACAATTACATCAGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTAAGGATCTGGAATGTTaGCTGATCTTATGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGKDLEC*LILWAD
Trigger: GTCTGCCCATAAGATCAGCAAACATTCCAGATCCTT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTCTGGGCCTGCTTTCTaGGCTCTCTGTATCGATCAT +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTSGPAF*ALCIDH
Trigger: ATGATCGATACAGAGAGCCAAGAAAGCAGGCCCAGA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp ATCTCTAGACCCCTGATTAGATGTATTGACAGTAAAAGGATACAGGTCCTTCAGGATTGGAGTCAAGACTaGCTAAAGATGCTCTGGAGT +
Preference number: 5 (lower is better)
Translates to: ISRPLIRCIDSKRIQVLQDWSQD*LKMLWS
Trigger: ACTCCAGAGCATCTTTAGCAAGTCTTGACTCCAATC...CTGAAGGACCTGTATCCTTTTACTGTCAATACATCTAATCAGGGGTCTAGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTCATTGGTACTTGGATaGGAGTCAAGACTTGCTAAA +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDSLVLG*ESRLAK
Trigger: TTTAGCAAGTCTTGACTCCAATCCAAGTACCAATGA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTCACTGCTCTTCTCATaGGTACTTGGATTGGAGTCA +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGSLLFS*VLGLES
Trigger: TGACTCCAATCCAAGTACCAATGAGAAGAGCAGTGA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCCATTGTGCAAAGCTGATTAAGCTCAGAAACCTTCTTGGACATCTCGTCAATTCACTGCTCTTCTCATaGGTACTTGGATTGGAGTCA +
Preference number: 5 (lower is better)
Translates to: FHCAKLIKLRNLLGHLVNSLLFS*VLGLES
Trigger: TGACTCCAATCCAAGTACCAATGAGAAGAGCAGTGA...ATTGACGAGATGTCCAAGAAGGTTTCTGAGCTTAATCAGCTTTGCACAATGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCGGGATCTTTTCACAGTaGTCCGTCTTCTCACTGCTC +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTGIFSQ*SVFSLL
Trigger: GAGCAGTGAGAAGACGGACAACTGTGAAAAGATCCC...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp GCACACAGTTATATTCCGTGCCTTGTTGAAGCATTTCTGGCTATCATACTTGAGTCAAAGACAAGGGTCTaGGGATCTTTTCACAGTTGT +
Preference number: 5 (lower is better)
Translates to: AHSYIPCLVEAFLAIILESKTRV*GSFHSC
Trigger: ACAACTGTGAAAAGATCCCAAGACCCTTGTCTTTGA...CTCAAGTATGATAGCCAGAAATGCTTCAACAAGGCACGGAATATAACTGTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCCCTTTGAGAGTTCCATaGTTCTGGGTGGACTGCACA +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTPLRVP*FWVDCT
Trigger: TGTGCAGTCCACCCAGAACAATGGAACTCTCAAAGG...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGAAGGATTGGATCCTTaGAGAGTTCCATTGTTCTGG +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGEGLDP*RVPLFW
Trigger: CCAGAACAATGGAACTCTCAAAGGATCCAATCCTTC...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCGTCTGGCAGGAAGGATaGGATCCTTTGAGAGTTCCA +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTVWQEG*DPLRVP
Trigger: TGGAACTCTCAAAGGATCCAATCCTTCCTGCCAGAC...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTTGCTGGTCATGGTATaGTCTAACATCTGTAAGAGT +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDLLVMV*SNICKS
Trigger: ACTCTTACAGATGTTAGACAATACCATGACCAGCAA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp GGTAAGATTCAGGAAATCTCTGAGGCCGGGGAAGCTGGATTTTATTTGTGTCAATCTATTTCATTGGAGTaGCTGGTCATGGTATTGTCT +
Preference number: 5 (lower is better)
Translates to: GKIQEISEAGEAGFYLCQSISLE*LVMVLS
Trigger: AGACAATACCATGACCAGCAACTCCAATGAAATAGA...TTGACACAAATAAAATCCAGCTTCCCCGGCCTCAGAGATTTCCTGAATCTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp GCACACAGTTATATTCCGTGCCTTGTTGAAGCATTTCTGGCTATCATACTTGAGTTGACAGTCACATTGTaGGAGTTGTCTCTGATGAGT +
Preference number: 5 (lower is better)
Translates to: AHSYIPCLVEAFLAIILELTVTL*ELSLMS
Trigger: ACTCATCAGAGACAACTCCAACAATGTGACTGTCAA...CTCAAGTATGATAGCCAGAAATGCTTCAACAAGGCACGGAATATAACTGTGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATATTTTGACAGTCACATaGTTGGAGTTGTCTCTGATG +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDILTVT*LELSLM
Trigger: CATCAGAGACAACTCCAACAATGTGACTGTCAAAAT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTAATTGCAAGCGAATGTaGAAACCGAGAGCCTCCAAT +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGNCKRM*KPRASN
Trigger: ATTGGAGGCTCTCGGTTTCAACATTCGCTTGCAATT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGTTGTTAGTAATGAGTaGCTATCACAGGGGTGGGTA +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGVVSNE*LSQGWV
Trigger: TACCCACCCCTGTGATAGCAACTCATTACTAACAAC...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGCAATGATGGGCTTGTaGACATCAGCAATGAGTTCA +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGAMMGL*TSAMSS
Trigger: TGAACTCATTGCTGATGTCAACAAGCCCATCATTGC...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTACAGCAATGATGGGCTaGTTGACATCAGCAATGAGT +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGTAMMG*LTSAMS
Trigger: ACTCATTGCTGATGTCAACAAGCCCATCATTGCTGT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp GCACACAGTTATATTCCGTGCCTTGTTGAAGCATTTCTGGCTATCATACTTGAGTTGGGGTTTACCTTGTaGGAATCCTGGATTATCTTC +
Preference number: 5 (lower is better)
Translates to: AHSYIPCLVEAFLAIILELGFTL*ESWIIF
Trigger: GAAGATAATCCAGGATTCCAACAAGGTAAACCCCAA...CTCAAGTATGATAGCCAGAAATGCTTCAACAAGGCACGGAATATAACTGTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATCAGTTCTGTGCTCGATaGGCTAATTACTTGTATTCT +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDQFCAR*ANYLYS
Trigger: AGAATACAAGTAATTAGCCAATCGAGCACAGAACTG...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTCAATTGCCACTTCAATaGGATTCAGTTCTGTGCTCG +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGQLPLQ*DSVLCS
Trigger: CGAGCACAGAACTGAATCCAATTGAAGTGGCAATTG...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATTGTCAGGGTACTTCTTaGCATTGGTTTCTTCAAGAA +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDCQGTS*HWFLQE
Trigger: TTCTTGAAGAAACCAATGCAAAGAAGTACCCTGACA...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATCTTCAAAAGCTTTACTaGGTTGTCAGGGTACTTCTT +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDLQKLY*VVRVLL
Trigger: AAGAAGTACCCTGACAACCAAGTAAAGCTTTTGAAG...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS GCA 90 bp AAATGTATTTCTAGTCTGTTGGCTGCAACTGTCAACATACCTTACTaGCCAAGCAAAAGGCATACGGTATTTTCCCAATTTGCTGCAGAA +
Preference number: 5 (lower is better)
Translates to: KCISSLLAATVNIPY*PSKRHTVFSQFAAE
Trigger: TTCTGCAGCAAATTGGGAAAATACCGTATGCCTTTTGCTTGGGCAGTAAGGTATGTTGACAGTTGCAGCCAACAGACTAGAAATACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492369.5
CDS CCA 90 bp AAACTGAAGCTTCCAATGCCACCATTAAATGTATTTCTAGTCTGTTaGCTGCAACTGTCAACATACCTTACTGCCCAAGCAAAAGGCATA +
Preference number: 5 (lower is better)
Translates to: KLKLPMPPLNVFLVC*LQLSTYLTAQAKGI
Trigger: TATGCCTTTTGCTTGGGCAGTAAGGTATGTTGACAGTTGCAGCCAACAGACTAGAAATACATTTAATGGTGGCATTGGAAGCTTCAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492369.5
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGAAGAACAAGAGATCTaGAAGAGGATCATTCCGGTA +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGEEQEI*KRIIPV
Trigger: TACCGGAATGATCCTCTTCAAGATCTCTTGTTCTTC...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp ATCTCTAGACCCCTGATTAGATGTATTGACAGTAAAAGGATACAGGTCCTTCAGGAAGAACAAGAGATCTaGAAGAGGATCATTCCGGTA +
Preference number: 5 (lower is better)
Translates to: ISRPLIRCIDSKRIQVLQEEQEI*KRIIPV
Trigger: TACCGGAATGATCCTCTTCAAGATCTCTTGTTCTTC...CTGAAGGACCTGTATCCTTTTACTGTCAATACATCTAATCAGGGGTCTAGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTAGTAAATTTTCTGCCTaGTGCTCTGCATCTTCAGGT +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGSKFSA*CSASSG
Trigger: ACCTGAAGATGCAGAGCACAAGGCAGAAAATTTACT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCATTTGCAGAATGCGGTaGAGGGTGTGGATCCATTCA +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTICRMR*RVWIHS
Trigger: TGAATGGATCCACACCCTCAACCGCATTCTGCAAAT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCGTGATGGTGTCGATGTaGCCATTTTCCAAAGCCACA +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTVMVSM*PFSKAT
Trigger: TGTGGCTTTGGAAAATGGCAACATCGACACCATCAC...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTCGGTATTTTCCCAATTaGCTGCAGAATTGTCTGTTG +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGRYFPN*LQNCLL
Trigger: CAACAGACAATTCTGCAGCAAATTGGGAAAATACCG...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCGGAATGGTCTGCATTTaGCTTATTCTGTCGGCCCTT +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTGMVCI*LILSAL
Trigger: AAGGGCCGACAGAATAAGCAAAATGCAGACCATTCC...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGTTATATTCCGTGCCTaGTTGAAGCATTTCTGGCTA +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGVIFRA*LKHFWL
Trigger: TAGCCAGAAATGCTTCAACAAGGCACGGAATATAAC...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp GTCAGGGTACTTCTTTGCATTGGTTTCTTCAAGAAAAGCTCGTGCATAGGCCATCCTGAGTATTTACTGTaGATACAACAAATGTCGACA +
Preference number: 5 (lower is better)
Translates to: VRVLLCIGFFKKSSCIGHPEYLL*IQQMST
Trigger: TGTCGACATTTGTTGTATCAACAGTAAATACTCAGG...ATGGCCTATGCACGAGCTTTTCTTGAAGAAACCAATGCAAAGAAGTACCCTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATCTGTTGTTGAGTCATTaGATTTCAAAAGACCAGTCA +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDLLLSH*ISKDQS
Trigger: TGACTGGTCTTTTGAAATCAAATGACTCAACAACAG...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp GCACACAGTTATATTCCGTGCCTTGTTGAAGCATTTCTGGCTATCATACTTGAGGAAGCTGGATTTTATTaGTGTCAATCAAGTGCTGTG +
Preference number: 5 (lower is better)
Translates to: AHSYIPCLVEAFLAIILEEAGFY*CQSSAV
Trigger: CACAGCACTTGATTGACACAAATAAAATCCAGCTTC...CTCAAGTATGATAGCCAGAAATGCTTCAACAAGGCACGGAATATAACTGTGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTGGCAACGCTGTGGTTaGCCCTTCTTGTTTCTTCAA +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTWQRCG*PFLFLQ
Trigger: TTGAAGAAACAAGAAGGGCAAACCACAGCGTTGCCA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCAATGTAAAGCAGCGCTaGAGAAATCTGGCAACGCTG +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTNVKQR*RNLATL
Trigger: CAGCGTTGCCAGATTTCTCAAGCGCTGCTTTACATT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCGATAGCTGTCTGGCTTaGAAATCCTCCATTGGTGCT +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTDSCLA*KSSIGA
Trigger: AGCACCAATGGAGGATTTCAAAGCCAGACAGCTATC...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTCTTCTCATTGGTACTaGGATTGGAGTCAAGACTTG +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGSSHWY*DWSQDL
Trigger: CAAGTCTTGACTCCAATCCAAGTACCAATGAGAAGA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTCAAAGACAAGGGTCTaGGGATCTTTTCACAGTTGT +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGSKTRV*GSFHSC
Trigger: ACAACTGTGAAAAGATCCCAAGACCCTTGTCTTTGA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATAACATCTGTAAGAGTTaGGGGTTAGAAAGTGCATTT +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDNICKS*GLESAF
Trigger: AAATGCACTTTCTAACCCCAAACTCTTACAGATGTT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTACGATGTCTATTTCATaGGAGTTGCTGGTCATGGTA +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGTMSIS*ELLVMV
Trigger: TACCATGACCAGCAACTCCAATGAAATAGACATCGT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTTGACAGTCACATTGTaGGAGTTGTCTCTGATGAGT +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGLTVTL*ELSLMS
Trigger: ACTCATCAGAGACAACTCCAACAATGTGACTGTCAA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCAACTGGCTCACAGCTTaGATGAGTTGTAAGTGGGAC +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTNWLTA*MSCKWD
Trigger: GTCCCACTTACAACTCATCAAAGCTGTGAGCCAGTT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATATTGCTGTTTTTCATTaGCTTATCTCCATTGGCGAA +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDIAVFH*LISIGE
Trigger: TTCGCCAATGGAGATAAGCAAATGAAAAACAGCAAT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp GGTAAGATTCAGGAAATCTCTGAGGCCGGGGAAGCTGGATTTTATTTGTGTCAAATTGCTGTTTTTCATTaGCTTATCTCCATTGGCGAA +
Preference number: 5 (lower is better)
Translates to: GKIQEISEAGEAGFYLCQIAVFH*LISIGE
Trigger: TTCGCCAATGGAGATAAGCAAATGAAAAACAGCAAT...TTGACACAAATAAAATCCAGCTTCCCCGGCCTCAGAGATTTCCTGAATCTTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTTCCTCCACTGGGAGTaGTTAGTAATGAGTTGCTAT +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGFLHWE*LVMSCY
Trigger: ATAGCAACTCATTACTAACAACTCCCAGTGGAGGAA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp GGTAAGATTCAGGAAATCTCTGAGGCCGGGGAAGCTGGATTTTATTTGTGTCAAATTGTATGGTGTATCTaGCATTCCAGAATCCTCTTT +
Preference number: 5 (lower is better)
Translates to: GKIQEISEAGEAGFYLCQIVWCI*HSRILF
Trigger: AAAGAGGATTCTGGAATGCAAGATACACCATACAAT...TTGACACAAATAAAATCCAGCTTCCCCGGCCTCAGAGATTTCCTGAATCTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATATTGTATGGTGTATCTaGCATTCCAGAATCCTCTTT +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDIVWCI*HSRILF
Trigger: AAAGAGGATTCTGGAATGCAAGATACACCATACAAT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATACCAGGATATTCTCATaGTATGGTGTATCTTGCATT +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDTRIFS*YGVSCI
Trigger: AATGCAAGATACACCATACAATGAGAATATCCTGGT...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTTGGGGTTTACCTTGTaGGAATCCTGGATTATCTTC +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGLGFTL*ESWIIF
Trigger: GAAGATAATCCAGGATTCCAACAAGGTAAACCCCAA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTTGGGGTCCAAATCCTaGGGGTTTACCTTGTTGGAA +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTLGSKS*GFTLLE
Trigger: TTCCAACAAGGTAAACCCCAAGGATTTGGACCCCAA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTACAAAGCGGTTGATGTaGTGGTGCATTTCGAAATCT +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGTKRLM*WCISKS
Trigger: AGATTTCGAAATGCACCACAACATCAACCGCTTTGT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTGGGTCTGATCGATTGGCTAATTACTaGTATTCTCTTCTTCACGTA +
Preference number: 5 (lower is better)
Translates to: SSPRLAANSESSLRGGSDRLANY*YSLLHV
Trigger: TACGTGAAGAAGAGAATACAAGTAATTAGCCAATCG...ATCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCAGCTCAGAAACCTTCTaGGACATCTCGTCAATTGCC +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTSSETF*DISSIA
Trigger: GGCAATTGACGAGATGTCCAAGAAGGTTTCTGAGCT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTACATGCATCTGCAAATaGCCTGAAGATCTCCTTCAA +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGTCICK*PEDLLQ
Trigger: TTGAAGGAGATCTTCAGGCAATTTGCAGATGCATGT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp GATGCTCAAACAGGCATTAATTGCTCAGTAATCTGTCACAACACAGCATCGTTTAAGTTTGAGGAAGGATaGTTTTGCTGTAACGTGTGG +
Preference number: 5 (lower is better)
Translates to: DAQTGINCSVICHNTASFKFEEG*FCCNVW
Trigger: CCACACGTTACAGCAAAACAATCCTTCCTCAAACTT...AAACGATGCTGTGTTGTGACAGATTACTGAGCAATTAATGCCTGTTTGAGCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458608.1
CDS TCA 90 bp AAAGCAATTATGGTTCTTCATGAAGAGGTCATGCATCCAAGTGAATaGTGTGTCCATCTATGTCCACAGAACTCAGACTTTCTTTCAGAG +
Preference number: 5 (lower is better)
Translates to: KAIMVLHEEVMHPSE*CVHLCPQNSDFLSE
Trigger: CTCTGAAAGAAAGTCTGAGTTCTGTGGACATAGATGGACACATCATTCACTTGGATGCATGACCTCTTCATGAAGAACCATAATTGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492369.5
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTTTTCTTCAAATGGTTaGATCACAGACTCAGGTTCC +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGFSSNG*ITDSGS
Trigger: GGAACCTGAGTCTGTGATCAAACCATTTGAAGAAAA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTATCTTTTGTGCATACTaGTTGGAGTCTGGGTTCTTA +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGIFCAY*LESGFL
Trigger: TAAGAACCCAGACTCCAACAAGTATGCACAAAAGAT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTACAATGGTGAAAATCTaGAGTCTCTGTCCACATTTC +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGTMVKI*SLCPHF
Trigger: GAAATGTGGACAGAGACTCAAGATTTTCACCATTGT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TATTTCCAAATCACATGGTCGGATAGGACCATGACAAGATTGTCCAATTCATTTACGATGTTACACAATTaGGATGCTCCAAGGGAACGT +
Preference number: 5 (lower is better)
Translates to: YFQITWSDRTMTRLSNSFTMLHN*DAPRER
Trigger: ACGTTCCCTTGGAGCATCCAAATTGTGTAACATCGT...AAATGAATTGGACAATCTTGTCATGGTCCTATCCGACCATGTGATTTGGAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCACGATGTTACACAATTaGGATGCTCCAAGGGAACGT +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTTMLHN*DAPRER
Trigger: ACGTTCCCTTGGAGCATCCAAATTGTGTAACATCGT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCATACACTTCAGGGGCTaGGCACTTTCTTCATCTGAA +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTIHFRG*ALSSSE
Trigger: TTCAGATGAAGAAAGTGCCAAGCCCCTGAAGTGTAT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTGGGATGTTGTACTCTaGAGAAGCTATCTGATCGTG +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTWDVVL*RSYLIV
Trigger: CACGATCAGATAGCTTCTCAAGAGTACAACATCCCA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCGCAGACTTGTTGCTATaGGGATGTTGTACTCTTGAG +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTADLLL*GCCTLE
Trigger: CTCAAGAGTACAACATCCCAATAGCAACAAGTCTGC...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTTGCATGCCCTGGTCTaGAACACGAACTTAATATAT +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGLHALV*NTNLIY
Trigger: ATATATTAAGTTCGTGTTCAAGACCAGGGCATGCAA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTCTTCAAGTGCATCCTaGTATTTCCAAATCACATGG +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGSSSAS*YFQITW
Trigger: CCATGTGATTTGGAAATACAAGGATGCACTTGAAGA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCAAGGATCTGGAATGTTaGCTGATCTTATGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTKDLEC*LILWAD
Trigger: GTCTGCCCATAAGATCAGCAAACATTCCAGATCCTT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp GCACACAGTTATATTCCGTGCCTTGTTGAAGCATTTCTGGCTATCATACTTGAGCCGATTAAGAAGTGTTaGCGACAAAATTCATTTGTG +
Preference number: 5 (lower is better)
Translates to: AHSYIPCLVEAFLAIILEPIKKC*RQNSFV
Trigger: CACAAATGAATTTTGTCGCAAACACTTCTTAATCGG...CTCAAGTATGATAGCCAGAAATGCTTCAACAAGGCACGGAATATAACTGTGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCCCTTCAGATAAATCCTaGGCATATTGTCCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTPSDKS*AYCPGA
Trigger: TGCTCCTGGACAATATGCCAAGGATTTATCTGAAGG...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCGATTGGAGTCAAGACTaGCTAAAGATGCTCTGGAGT +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTDWSQD*LKMLWS
Trigger: ACTCCAGAGCATCTTTAGCAAGTCTTGACTCCAATC...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTCACTGCTCTTCTCATaGGTACTTGGATTGGAGTCA +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTSLLFS*VLGLES
Trigger: TGACTCCAATCCAAGTACCAATGAGAAGAGCAGTGA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCGAAGGATTGGATCCTTaGAGAGTTCCATTGTTCTGG +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTEGLDP*RVPLFW
Trigger: CCAGAACAATGGAACTCTCAAAGGATCCAATCCTTC...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp GCACACAGTTATATTCCGTGCCTTGTTGAAGCATTTCTGGCTATCATACTTGAGAACATCTGTAAGAGTTaGGGGTTAGAAAGTGCATTT +
Preference number: 5 (lower is better)
Translates to: AHSYIPCLVEAFLAIILENICKS*GLESAF
Trigger: AAATGCACTTTCTAACCCCAAACTCTTACAGATGTT...CTCAAGTATGATAGCCAGAAATGCTTCAACAAGGCACGGAATATAACTGTGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp CATGCTGATGTAATTGTTGACCATCTTAAACACATACCCTCGGTCCATAAATGTACGATGTCTATTTCATaGGAGTTGCTGGTCATGGTA +
Preference number: 5 (lower is better)
Translates to: HADVIVDHLKHIPSVHKCTMSIS*ELLVMV
Trigger: TACCATGACCAGCAACTCCAATGAAATAGACATCGT...ACATTTATGGACCGAGGGTATGTGTTTAAGATGGTCAACAATTACATCAGCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCGTCACATTGTTGGAGTaGTCTCTGATGAGTCTGTGT +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTVTLLE*SLMSLC
Trigger: ACACAGACTCATCAGAGACAACTCCAACAATGTGAC...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTATTTTGACAGTCACATaGTTGGAGTTGTCTCTGATG +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGILTVT*LELSLM
Trigger: CATCAGAGACAACTCCAACAATGTGACTGTCAAAAT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCAATTGCAAGCGAATGTaGAAACCGAGAGCCTCCAAT +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTNCKRM*KPRASN
Trigger: ATTGGAGGCTCTCGGTTTCAACATTCGCTTGCAATT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTCCATTGGCGAAATTATaGGTAATTGCAAGCGAATGT +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGPLAKL*VIASEC
Trigger: ACATTCGCTTGCAATTACCAATAATTTCGCCAATGG...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCGCAATGATGGGCTTGTaGACATCAGCAATGAGTTCA +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTAMMGL*TSAMSS
Trigger: TGAACTCATTGCTGATGTCAACAAGCCCATCATTGC...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCACAGCAATGATGGGCTaGTTGACATCAGCAATGAGT +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTTAMMG*LTSAMS
Trigger: ACTCATTGCTGATGTCAACAAGCCCATCATTGCTGT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTCCTTGGGGTTTACCTaGTTGGAATCCTGGATTATC +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTSLGFT*LESWII
Trigger: GATAATCCAGGATTCCAACAAGGTAAACCCCAAGGA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp GAAGAATCTGTTTCCTCTGGCGTGCATTCACAAGTTACAGAATTATCCAGCGAACGATTGGCTAATTACTaGTATTCTCTTCTTCACGTA +
Preference number: 5 (lower is better)
Translates to: EESVSSGVHSQVTELSSERLANY*YSLLHV
Trigger: TACGTGAAGAAGAGAATACAAGTAATTAGCCAATCG...TTCGCTGGATAATTCTGTAACTTGTGAATGCACGCCAGAGGAAACAGATTCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTGTCAGGGTACTTCTTaGCATTGGTTTCTTCAAGAA +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGCQGTS*HWFLQE
Trigger: TTCTTGAAGAAACCAATGCAAAGAAGTACCCTGACA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTAAAAGCTTTACTTGGTaGTCAGGGTACTTCTTTGCA +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGKSFTW*SGYFFA
Trigger: TGCAAAGAAGTACCCTGACAACCAAGTAAAGCTTTT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTCTTCAAAAGCTTTACTaGGTTGTCAGGGTACTTCTT +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGLQKLY*VVRVLL
Trigger: AAGAAGTACCCTGACAACCAAGTAAAGCTTTTGAAG...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTAATATTCAACCTGGCTaGATCAACACTGCTCAAAGA +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGNIQPG*INTAQR
Trigger: TCTTTGAGCAGTGTTGATCAAGCCAGGTTGAATATT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTAAGCCTAGGCTTTTCTaGAGAACTAAATCTGTGGAT +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGKPRLF*RTKSVD
Trigger: ATCCACAGATTTAGTTCTCAAGAAAAGCCTAGGCTT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409592.7
CDS TCA 90 bp GATGCTAAAGTTGGATACATTGAGATAATGTCAGCAAAGTTCAAATaGATACTTGATGGGCTGTCTTATTTGCCACCACACCTGGCTAAT +
Preference number: 5 (lower is better)
Translates to: DAKVGYIEIMSAKFK*ILDGLSYLPPHLAN
Trigger: ATTAGCCAGGTGTGGTGGCAAATAAGACAGCCCATCAAGTATTCATTTGAACTTTGCTGACATTATCTCAATGTATCCAACTTTAGCATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492369.5
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCAGTAAATTTTCTGCCTaGTGCTCTGCATCTTCAGGT +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTSKFSA*CSASSG
Trigger: ACCTGAAGATGCAGAGCACAAGGCAGAAAATTTACT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTCTCCATGTTTCGAGTaGTTTTTACAGTATCTTCTG +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGSPCFE*FLQYLL
Trigger: CAGAAGATACTGTAAAAACAACTCGAAACATGGAGA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTTTTGTGCATACTTGTaGGAGTCTGGGTTCTTAATA +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGFCAYL*ESGFLI
Trigger: TATTAAGAACCCAGACTCCAACAAGTATGCACAAAA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CATGCTGATGTAATTGTTGACCATCTTAAACACATACCCTCGGTCCATAAATGTTCCACATTTCCCTGGTaGTCCTTAAATACTGATCTT +
Preference number: 5 (lower is better)
Translates to: HADVIVDHLKHIPSVHKCSTFPW*SLNTDL
Trigger: AAGATCAGTATTTAAGGACAACCAGGGAAATGTGGA...ACATTTATGGACCGAGGGTATGTGTTTAAGATGGTCAACAATTACATCAGCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTTCCTCAGTTGAAATCTaGCTACTTTCTTGTCTAAAC +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGSSVEI*LLSCLN
Trigger: GTTTAGACAAGAAAGTAGCAAGATTTCAACTGAGGA...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCCATTGTGCAAAGCTGATTAAGCTCAGAAACCTTCTTGGACATCTCGTCAATTCCTCAGTTGAAATCTaGCTACTTTCTTGTCTAAAC +
Preference number: 5 (lower is better)
Translates to: FHCAKLIKLRNLLGHLVNSSVEI*LLSCLN
Trigger: GTTTAGACAAGAAAGTAGCAAGATTTCAACTGAGGA...ATTGACGAGATGTCCAAGAAGGTTTCTGAGCTTAATCAGCTTTGCACAATGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCATATTCCGTGCCTTGTaGAAGCATTTCTGGCTATCA +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTIFRAL*KHFWLS
Trigger: TGATAGCCAGAAATGCTTCAACAAGGCACGGAATAT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCACAAATGTCGACACTTaGAAAAGTGGTTTGCCACCA +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTTNVDT*KSGLPP
Trigger: TGGTGGCAAACCACTTTTCAAAGTGTCGACATTTGT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTCCTGAGTATTTACTGTaGATACAACAAATGTCGACA +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGPEYLL*IQQMST
Trigger: TGTCGACATTTGTTGTATCAACAGTAAATACTCAGG...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTCTGTTGTTGAGTCATTaGATTTCAAAAGACCAGTCA +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGLLLSH*ISKDQS
Trigger: TGACTGGTCTTTTGAAATCAAATGACTCAACAACAG...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTCCGATTAAGAAGTGTTaGCGACAAAATTCATTTGTG +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGPIKKC*RQNSFV
Trigger: CACAAATGAATTTTGTCGCAAACACTTCTTAATCGG...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTCAAAGACAAGGGTCTaGGGATCTTTTCACAGTTGT +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTSKTRV*GSFHSC
Trigger: ACAACTGTGAAAAGATCCCAAGACCCTTGTCTTTGA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCACGATGTCTATTTCATaGGAGTTGCTGGTCATGGTA +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTTMSIS*ELLVMV
Trigger: TACCATGACCAGCAACTCCAATGAAATAGACATCGT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTTGACAGTCACATTGTaGGAGTTGTCTCTGATGAGT +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTLTVTL*ELSLMS
Trigger: ACTCATCAGAGACAACTCCAACAATGTGACTGTCAA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCAACGCTGAAGGAAACTaGCATACAAACAGTCTCAAG +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTNAEGN*HTNSLK
Trigger: CTTGAGACTGTTTGTATGCAAGTTTCCTTCAGCGTT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTATTGCTGTTTTTCATTaGCTTATCTCCATTGGCGAA +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGIAVFH*LISIGE
Trigger: TTCGCCAATGGAGATAAGCAAATGAAAAACAGCAAT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp ATCTCTAGACCCCTGATTAGATGTATTGACAGTAAAAGGATACAGGTCCTTCAGACCAGGATATTCTCATaGTATGGTGTATCTTGCATT +
Preference number: 5 (lower is better)
Translates to: ISRPLIRCIDSKRIQVLQTRIFS*YGVSCI
Trigger: AATGCAAGATACACCATACAATGAGAATATCCTGGT...CTGAAGGACCTGTATCCTTTTACTGTCAATACATCTAATCAGGGGTCTAGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTACCAGGATATTCTCATaGTATGGTGTATCTTGCATT +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGTRIFS*YGVSCI
Trigger: AATGCAAGATACACCATACAATGAGAATATCCTGGT...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCACAAAGCGGTTGATGTaGTGGTGCATTTCGAAATCT +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTTKRLM*WCISKS
Trigger: AGATTTCGAAATGCACCACAACATCAACCGCTTTGT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp CTATCTTTCTCTTCCCCGAGATTAGCTGCAAATTCAGAAAGTTCTCTTAGAGGTCGATTGGCTAATTACTaGTATTCTCTTCTTCACGTA +
Preference number: 5 (lower is better)
Translates to: LSFSSPRLAANSESSLRGRLANY*YSLLHV
Trigger: TACGTGAAGAAGAGAATACAAGTAATTAGCCAATCG...ACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCTCGGGGAAGAGAAAGATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCACATGCATCTGCAAATaGCCTGAAGATCTCCTTCAA +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTTCICK*PEDLLQ
Trigger: TTGAAGGAGATCTTCAGGCAATTTGCAGATGCATGT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTCTGTGGATTTCTTCTaGGTTTACTCTCCTCACAGT +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTSVDFF*VYSPHS
Trigger: ACTGTGAGGAGAGTAAACCAAGAAGAAATCCACAGA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409592.7
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTTTTCTTCAAATGGTTaGATCACAGACTCAGGTTCC +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTFSSNG*ITDSGS
Trigger: GGAACCTGAGTCTGTGATCAAACCATTTGAAGAAAA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TATTTCCAAATCACATGGTCGGATAGGACCATGACAAGATTGTCCAATTCATTTTTTTCTTCAAATGGTTaGATCACAGACTCAGGTTCC +
Preference number: 5 (lower is better)
Translates to: YFQITWSDRTMTRLSNSFFSSNG*ITDSGS
Trigger: GGAACCTGAGTCTGTGATCAAACCATTTGAAGAAAA...AAATGAATTGGACAATCTTGTCATGGTCCTATCCGACCATGTGATTTGGAAATA
38% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp CATGCTGATGTAATTGTTGACCATCTTAAACACATACCCTCGGTCCATAAATGTTTTTGTGCATACTTGTaGGAGTCTGGGTTCTTAATA +
Preference number: 5 (lower is better)
Translates to: HADVIVDHLKHIPSVHKCFCAYL*ESGFLI
Trigger: TATTAAGAACCCAGACTCCAACAAGTATGCACAAAA...ACATTTATGGACCGAGGGTATGTGTTTAAGATGGTCAACAATTACATCAGCATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp TATTTCCAAATCACATGGTCGGATAGGACCATGACAAGATTGTCCAATTCATTTATCTTTTGTGCATACTaGTTGGAGTCTGGGTTCTTA +
Preference number: 5 (lower is better)
Translates to: YFQITWSDRTMTRLSNSFIFCAY*LESGFL
Trigger: TAAGAACCCAGACTCCAACAAGTATGCACAAAAGAT...AAATGAATTGGACAATCTTGTCATGGTCCTATCCGACCATGTGATTTGGAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTCCACATTTCCCTGGTaGTCCTTAAATACTGATCTT +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTSTFPW*SLNTDL
Trigger: AAGATCAGTATTTAAGGACAACCAGGGAAATGTGGA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCACAATGGTGAAAATCTaGAGTCTCTGTCCACATTTC +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTTMVKI*SLCPHF
Trigger: GAAATGTGGACAGAGACTCAAGATTTTCACCATTGT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTTGCATGCCCTGGTCTaGAACACGAACTTAATATAT +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTLHALV*NTNLIY
Trigger: ATATATTAAGTTCGTGTTCAAGACCAGGGCATGCAA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCGAAGCTGGATTTTATTaGTGTCAATCAAGTGCTGTG +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTEAGFY*CQSSAV
Trigger: CACAGCACTTGATTGACACAAATAAAATCCAGCTTC...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTCTTCAAGTGCATCCTaGTATTTCCAAATCACATGG +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTSSSAS*YFQITW
Trigger: CCATGTGATTTGGAAATACAAGGATGCACTTGAAGA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTCATTGGTACTTGGATaGGAGTCAAGACTTGCTAAA +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTSLVLG*ESRLAK
Trigger: TTTAGCAAGTCTTGACTCCAATCCAAGTACCAATGA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTTGCTGGTCATGGTATaGTCTAACATCTGTAAGAGT +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTLLVMV*SNICKS
Trigger: ACTCTTACAGATGTTAGACAATACCATGACCAGCAA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTCTATTTCATTGGAGTaGCTGGTCATGGTATTGTCT +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTSISLE*LVMVLS
Trigger: AGACAATACCATGACCAGCAACTCCAATGAAATAGA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCATTTTGACAGTCACATaGTTGGAGTTGTCTCTGATG +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTILTVT*LELSLM
Trigger: CATCAGAGACAACTCCAACAATGTGACTGTCAAAAT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCCCATTGGCGAAATTATaGGTAATTGCAAGCGAATGT +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTPLAKL*VIASEC
Trigger: ACATTCGCTTGCAATTACCAATAATTTCGCCAATGG...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCAAAAGCTTTACTTGGTaGTCAGGGTACTTCTTTGCA +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTKSFTW*SGYFFA
Trigger: TGCAAAGAAGTACCCTGACAACCAAGTAAAGCTTTT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TATTTCCAAATCACATGGTCGGATAGGACCATGACAAGATTGTCCAATTCATTTAAAAGCTTTACTTGGTaGTCAGGGTACTTCTTTGCA +
Preference number: 5 (lower is better)
Translates to: YFQITWSDRTMTRLSNSFKSFTW*SGYFFA
Trigger: TGCAAAGAAGTACCCTGACAACCAAGTAAAGCTTTT...AAATGAATTGGACAATCTTGTCATGGTCCTATCCGACCATGTGATTTGGAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCCTTCAAAAGCTTTACTaGGTTGTCAGGGTACTTCTT +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTLQKLY*VVRVLL
Trigger: AAGAAGTACCCTGACAACCAAGTAAAGCTTTTGAAG...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTCTCCATGTTTCGAGTaGTTTTTACAGTATCTTCTG +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTSPCFE*FLQYLL
Trigger: CAGAAGATACTGTAAAAACAACTCGAAACATGGAGA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCTCCTCAGTTGAAATCTaGCTACTTTCTTGTCTAAAC +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTSSVEI*LLSCLN
Trigger: GTTTAGACAAGAAAGTAGCAAGATTTCAACTGAGGA...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCCCTGAGTATTTACTGTaGATACAACAAATGTCGACA +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTPEYLL*IQQMST
Trigger: TGTCGACATTTGTTGTATCAACAGTAAATACTCAGG...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCCTGTTGTTGAGTCATTaGATTTCAAAAGACCAGTCA +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTLLLSH*ISKDQS
Trigger: TGACTGGTCTTTTGAAATCAAATGACTCAACAACAG...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCCCGATTAAGAAGTGTTaGCGACAAAATTCATTTGTG +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTPIKKC*RQNSFV
Trigger: CACAAATGAATTTTGTCGCAAACACTTCTTAATCGG...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCAACATCTGTAAGAGTTaGGGGTTAGAAAGTGCATTT +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTNICKS*GLESAF
Trigger: AAATGCACTTTCTAACCCCAAACTCTTACAGATGTT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCATTGCTGTTTTTCATTaGCTTATCTCCATTGGCGAA +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTIAVFH*LISIGE
Trigger: TTCGCCAATGGAGATAAGCAAATGAAAAACAGCAAT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCATTGTATGGTGTATCTaGCATTCCAGAATCCTCTTT +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTIVWCI*HSRILF
Trigger: AAAGAGGATTCTGGAATGCAAGATACACCATACAAT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCACCAGGATATTCTCATaGTATGGTGTATCTTGCATT +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTTRIFS*YGVSCI
Trigger: AATGCAAGATACACCATACAATGAGAATATCCTGGT...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS-3UTR CAA 90 bp TTCAGAGGTTGGCAAAATTCTGAAGCTAGCGAGGTAAACAAAAATATTAACACCCGATTGGCTAATTACTaGTATTCTCTTCTTCACGTA +
Preference number: 5 (lower is better)
Translates to: FRGWQNSEASEVNKNINTRLANY*YSLLHV
Trigger: TACGTGAAGAAGAGAATACAAGTAATTAGCCAATCG...GGTGTTAATATTTTTGTTTACCTCGCTAGCTTCAGAATTTTGCCAACCTCTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000644695.1
ENST00000645028.1
CDS TCA 90 bp GTTCCTATAGAAAGAGATAGAAAAGGGAGGATAAAGTACTATTCATaGTCTATTTTACGCCAAATGCTTGTGCACTTGAGATTGCACATA +
Preference number: 5 (lower is better)
Translates to: VPIERDRKGRIKYYS*SILRQMLVHLRLHI
Trigger: TATGTGCAATCTCAAGTGCACAAGCATTTGGCGTAAAATAGATCATGAATAGTACTTTATCCTCCCTTTTCTATCTCTTTCTATAGGAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492369.5
CDS TCA 72 bp GCTCGGCCGCCTGCCCAGGTCTCAACAGGCTCCGGGTaGACCTGCGGGTCCGCTCACCGGCCATCGCCGGTC +
Preference number: 6 (lower is better)
Translates to: ARPPAQVSTGSG*TCGSAHRPSPV
Trigger: GACCGGCGATGGCCGGTGAGCGGACCCGCAGGTTCACCCGGAGCCTGTTGAGACCTGGGCAGGCGGCCGAGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000435582.1
ENST00000458608.1
ENST00000492369.5
CDS GCA 72 bp TCTGGACCACAGAACGAAAAGCTTGAAGCAGAACAATaGTGGCAGTGCAGCCCATCGCTGCATCCTGGAGCC +
Preference number: 6 (lower is better)
Translates to: SGPQNEKLEAEQ*WQCSPSLHPGA
Trigger: GGCTCCAGGATGCAGCGATGGGCTGCACTGCCAGCATTGTTCTGCTTCAAGCTTTTCGTTCTGTGGTCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644695.1
ENST00000645028.1
CDS CCA 72 bp GGACCACAGAACGAAAAGCTTGAAGCAGAACAATGCTaGCAGTGCAGCCCATCGCTGCATCCTGGAGCCTAC +
Preference number: 6 (lower is better)
Translates to: GPQNEKLEAEQC*QCSPSLHPGAY
Trigger: GTAGGCTCCAGGATGCAGCGATGGGCTGCACTGCCAGCATTGTTCTGCTTCAAGCTTTTCGTTCTGTGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644695.1
ENST00000645028.1
CDS CAA 72 bp GTGTGGACAGCTCCTCTGGACCACAGAACGAAAAGCTaGAAGCAGAACAATGCTGGCAGTGCAGCCCATCGC +
Preference number: 6 (lower is better)
Translates to: VWTAPLDHRTKS*KQNNAGSAAHR
Trigger: GCGATGGGCTGCACTGCCAGCATTGTTCTGCTTCAAGCTTTTCGTTCTGTGGTCCAGAGGAGCTGTCCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644695.1
ENST00000645028.1
CDS TCA 72 bp TGTGGACAGCTCCTCTGGACCACAGAACGAAAAGCTTaGAGCAGAACAATGCTGGCAGTGCAGCCCATCGCT +
Preference number: 6 (lower is better)
Translates to: CGQLLWTTERKA*SRTMLAVQPIA
Trigger: AGCGATGGGCTGCACTGCCAGCATTGTTCTGCTTCAAGCTTTTCGTTCTGTGGTCCAGAGGAGCTGTCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644695.1
ENST00000645028.1
CDS TCA 72 bp AATTACTCGAGTGCAGGTTTGGTCCACTCCGCGCTTTaGCAGGTCGTCCCTGCCCGTAATCTGCTCATTCAT +
Preference number: 6 (lower is better)
Translates to: NYSSAGLVHSAL*QVVPARNLLIH
Trigger: ATGAATGAGCAGATTACGGGCAGGGACGACCTGTCAAAGCGCGGAGTGGACCAAACCTGCACTCGAGTAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000645028.1
CDS CCA 72 bp GTGGGATGGTTCCTCTTGGCGTCGTCTACAAATGTGTaGACAGCTCCTCTGGACCACAGAACGAAAAGCTTG +
Preference number: 6 (lower is better)
Translates to: VGWFLLASSTNV*TAPLDHRTKSL
Trigger: CAAGCTTTTCGTTCTGTGGTCCAGAGGAGCTGTCCACACATTTGTAGACGACGCCAAGAGGAACCATCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644695.1
ENST00000645028.1
CDS CAA 90 bp TCTACAAATGTGTGGACAGCTCCTCTGGACCACAGAACGAAAAGCTaGAAGCAGAACAATGCTGGCAGTGCAGCCCATCGCTGCATCCTG +
Preference number: 6 (lower is better)
Translates to: STNVWTAPLDHRTKS*KQNNAGSAAHRCIL
Trigger: CAGGATGCAGCGATGGGCTGCACTGCCAGCATTGTTCTGCTTCAAGCTTTTCGTTCTGTGGTCCAGAGGAGCTGTCCACACATTTGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644695.1
ENST00000645028.1
CDS CCA 72 bp CTTTCCAGAGGCAAAATTTCGTGGGATGGTTCCTCTTaGCGTCGTCTACAAATGTGTGGACAGCTCCTCTGG +
Preference number: 6 (lower is better)
Translates to: LSRGKISWDGSS*RRLQMCGQLLW
Trigger: CCAGAGGAGCTGTCCACACATTTGTAGACGACGCCAAGAGGAACCATCCCACGAAATTTTGCCTCTGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644695.1
ENST00000645028.1
CDS CAA 90 bp TTCATCGTCACTTTCCAGAGGCAAAATTTCGTGGGATGGTTCCTCTaGGCGTCGTCTACAAATGTGTGGACAGCTCCTCTGGACCACAGA +
Preference number: 6 (lower is better)
Translates to: FIVTFQRQNFVGWFL*ASSTNVWTAPLDHR
Trigger: TCTGTGGTCCAGAGGAGCTGTCCACACATTTGTAGACGACGCCAAGAGGAACCATCCCACGAAATTTTGCCTCTGGAAAGTGACGATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644695.1
ENST00000645028.1
CDS GCA 72 bp CAGAACGAAAAGCTTGAAGCAGAACAATGCTGGCAGTaGAGCCCATCGCTGCATCCTGGAGCCTACAAAATA +
Preference number: 6 (lower is better)
Translates to: QNEKLEAEQCWQ*SPSLHPGAYKI
Trigger: TATTTTGTAGGCTCCAGGATGCAGCGATGGGCTGCACTGCCAGCATTGTTCTGCTTCAAGCTTTTCGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644695.1
ENST00000645028.1
CDS CAA 72 bp GTACTGGCTGCCAGTAGTTTTTCATCTCCCTCTGTTTaGAGCAAACATATTTTAGTGCCGCTGCTGCTGCCG +
Preference number: 6 (lower is better)
Translates to: VLAASSFSSPSV*SKHILVPLLLP
Trigger: CGGCAGCAGCAGCGGCACTAAAATATGTTTGCTCAAAACAGAGGGAGATGAAAAACTACTGGCAGCCAGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458608.1
CDS TCA 72 bp CGCTGCCTTAGGGCAAACGAATTCCTGGAGACTGCATaGATCTATCTTGATTTACTGCTGCCCAAACTTCCA +
Preference number: 6 (lower is better)
Translates to: RCLRANEFLETA*IYLDLLLPKLP
Trigger: TGGAAGTTTGGGCAGCAGTAAATCAAGATAGATTCATGCAGTCTCCAGGAATTCGTTTGCCCTAAGGCAGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492369.5
CDS CCA 72 bp CCTTGCTATGACGCTGCCTTAGGGCAAACGAATTCCTaGAGACTGCATGAATCTATCTTGATTTACTGCTGC +
Preference number: 6 (lower is better)
Translates to: PCYDAALGQTNS*RLHESILIYCC
Trigger: GCAGCAGTAAATCAAGATAGATTCATGCAGTCTCCAGGAATTCGTTTGCCCTAAGGCAGCGTCATAGCAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492369.5
CDS CCA 72 bp AGTCCTTATACGCTTAGTCAGGTCCTTCACCTCTGCTaGGAAATTGCTGTTCTTTGGAAAAGAGAGAGCCTG +
Preference number: 6 (lower is better)
Translates to: SPYTLSQVLHLC*EIAVLWKRESL
Trigger: CAGGCTCTCTCTTTTCCAAAGAACAGCAATTTCCCAGCAGAGGTGAAGGACCTGACTAAGCGTATAAGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492251.1
CDS CCA 72 bp TTCATCGTCACTTTCCAGAGGCAAAATTTCGTGGGATaGTTCCTCTTGGCGTCGTCTACAAATGTGTGGACA +
Preference number: 6 (lower is better)
Translates to: FIVTFQRQNFVG*FLLASSTNVWT
Trigger: TGTCCACACATTTGTAGACGACGCCAAGAGGAACCATCCCACGAAATTTTGCCTCTGGAAAGTGACGATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644695.1
ENST00000645028.1
CDS CAA 72 bp TTTATAGCTGGGGACCCAGAGACATGGAGAAGAAACTaGTTCCAAGTCACAGTAAGTAGTGGCCTGATCTGC +
Preference number: 6 (lower is better)
Translates to: FIAGDPETWRRN*FQVTVSSGLIC
Trigger: GCAGATCAGGCCACTACTTACTGTGACTTGGAACAAGTTTCTTCTCCATGTCTCTGGGTCCCCAGCTATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492369.5
CDS TCA 72 bp GAGGCATTTCATACCTTAATATATGACTGGACAGAATaGTCCAGCTGCTCCTCATGGCACTTGGCCACAATG +
Preference number: 6 (lower is better)
Translates to: EAFHTLIYDWTE*SSCSSWHLATM
Trigger: CATTGTGGCCAAGTGCCATGAGGAGCAGCTGGATCATTCTGTCCAGTCATATATTAAGGTATGAAATGCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472652.1
CDS CCA 72 bp GTGGTGCCTCAGTGGAGGAAGGATTATAGTCACTCCTaGGTTGTGACTACAAATAAGGCACTTGGCTATTTA +
Preference number: 6 (lower is better)
Translates to: VVPQWRKDYSHS*VVTTNKALGYL
Trigger: TAAATAGCCAAGTGCCTTATTTGTAGTCACAACCCAGGAGTGACTATAATCCTTCCTCCACTGAGGCACCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489831.1
CDS CAA 72 bp TCAATCTCAAAGGAATGTGAAGGAAGCTTCTCTGGTTaGTATTCTGCTCGGGGTAGCTGTCGAATGTCTCCA +
Preference number: 6 (lower is better)
Translates to: SISKECEGSFSG*YSARGSCRMSP
Trigger: TGGAGACATTCGACAGCTACCCCGAGCAGAATACAAACCAGAGAAGCTTCCTTCACATTCCTTTGAGATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000492369.5
ENST00000645028.1
CDS GCA 72 bp TATCTACCAAGAACCCATAGCATATCTGGTCATGCATaGAGGGTACATGTGTCACGGCCCTCTATTATAAAC +
Preference number: 6 (lower is better)
Translates to: YLPRTHSISGHA*RVHVSRPSIIN
Trigger: GTTTATAATAGAGGGCCGTGACACATGTACCCTGCATGCATGACCAGATATGCTATGGGTTCTTGGTAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492369.5
CDS TCA 72 bp GAGCAATTTCCAAGAGGCATTTCATACCTTAATATATaGCTGGACAGAATGATCCAGCTGCTCCTCATGGCA +
Preference number: 6 (lower is better)
Translates to: EQFPRGISYLNI*LDRMIQLLLMA
Trigger: TGCCATGAGGAGCAGCTGGATCATTCTGTCCAGTCATATATTAAGGTATGAAATGCCTCTTGGAAATTGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472652.1
CDS TCA 72 bp GGCAAACGAATTCCTGGAGACTGCATGAATCTATCTTaGTTTACTGCTGCCCAAACTTCCACATTTCTCCTT +
Preference number: 6 (lower is better)
Translates to: GKRIPGDCMNLS*FTAAQTSTFLL
Trigger: AAGGAGAAATGTGGAAGTTTGGGCAGCAGTAAATCAAGATAGATTCATGCAGTCTCCAGGAATTCGTTTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492369.5
CDS TCA 72 bp CTCAGTGGAGGAAGGATTATAGTCACTCCTGGGTTGTaGCTACAAATAAGGCACTTGGCTATTTATTCTGAC +
Preference number: 6 (lower is better)
Translates to: LSGGRIIVTPGL*LQIRHLAIYSD
Trigger: GTCAGAATAAATAGCCAAGTGCCTTATTTGTAGTCACAACCCAGGAGTGACTATAATCCTTCCTCCACTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489831.1
CDS TCA 72 bp CTTATCAGCATCTTCATGGTCAATCTCAAAGGAATGTaGAGGAAGCTTCTCTGGTTTGTATTCGGGGTAGCT +
Preference number: 6 (lower is better)
Translates to: LISIFMVNLKGM*RKLLWFVFGVA
Trigger: AGCTACCCCGAATACAAACCAGAGAAGCTTCCTTCACATTCCTTTGAGATTGACCATGAAGATGCTGATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644695.1
CDS GCA 72 bp AATTCCTGGAGACTGCATGAATCTATCTTGATTTACTaGTGCCCAAACTTCCACATTTCTCCTTCCTACACC +
Preference number: 6 (lower is better)
Translates to: NSWRLHESILIY*CPNFHISPSYT
Trigger: GGTGTAGGAAGGAGAAATGTGGAAGTTTGGGCAGCAGTAAATCAAGATAGATTCATGCAGTCTCCAGGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492369.5
CDS CCA 72 bp CTCATAACACAGGTATTGTCAGCTTCAATTTATAGCTaGGGACCCAGAGACATGGAGAAGAAACTTGTTCCA +
Preference number: 6 (lower is better)
Translates to: LITQVLSASIYS*GPRDMEKKLVP
Trigger: TGGAACAAGTTTCTTCTCCATGTCTCTGGGTCCCCAGCTATAAATTGAAGCTGACAATACCTGTGTTATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492369.5
CDS TCA 72 bp ATGGTTCTTCATGAAGAGGTCATGCATCCAAGTGAATaGTGTGTCCATCTATGTCCACAGAACTCAGACTTT +
Preference number: 6 (lower is better)
Translates to: MVLHEEVMHPSE*CVHLCPQNSDF
Trigger: AAAGTCTGAGTTCTGTGGACATAGATGGACACATCATTCACTTGGATGCATGACCTCTTCATGAAGAACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492369.5
CDS CAA 90 bp AAAACTGAAGCTTCCAATGCCACCATTAAATGTATTTCTAGTCTGTaGGCTGCAACTGTCAACATACCTTACTGCCCAAGCAAAAGGCAT +
Preference number: 6 (lower is better)
Translates to: KTEASNATIKCISSL*AATVNIPYCPSKRH
Trigger: ATGCCTTTTGCTTGGGCAGTAAGGTATGTTGACAGTTGCAGCCAACAGACTAGAAATACATTTAATGGTGGCATTGGAAGCTTCAGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492369.5
CDS CAA 90 bp GAGAAGCCTAGGCTTTTCTTGAGAACTAAATCTGTGGATTTCTTCTaGGTTTACTCTCCTCACAGTTCGTCTCTTCTTCCAAAATTCACT +
Preference number: 6 (lower is better)
Translates to: EKPRLFLRTKSVDFF*VYSPHSSSLLPKFT
Trigger: AGTGAATTTTGGAAGAAGAGACGAACTGTGAGGAGAGTAAACCAAGAAGAAATCCACAGATTTAGTTCTCAAGAAAAGCCTAGGCTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409592.7
CDS CCA 72 bp GAGTCAAGACTTGCTAAAGATGCTCTGGAGTCAGCATaGTTTACTGTAGAAATAGCTATTGATGAAAATGCT +
Preference number: 6 (lower is better)
Translates to: ESRLAKDALESA*FTVEIAIDENA
Trigger: AGCATTTTCATCAATAGCTATTTCTACAGTAAACCATGCTGACTCCAGAGCATCTTTAGCAAGTCTTGACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258390.12
ENST00000409592.7
ENST00000645028.1