RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DOCK1 (Homo sapiens)

Ensembl gene IDs: ENSG00000150760

Ensembl transcript IDs: ENST00000280333.9, ENST00000464466.1, ENST00000484400.5, ENST00000495574.1, ENST00000623213.2

Found 603 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGTAGGTTGGAGACACACCTCAACCAACGAAGTCACACCACCGGCTaGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGGAG +
Preference number: 1 (lower is better)
Translates to: CRLETHLNQRSHTTG*NKEGLDTTSHDSEE
Trigger: CTCCTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCAGCCGGTGGTGTGACTTCGTTGGTTGAGGTGTGTCTCCAACCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
3UTR TCA 90 bp CAGGGGAAATCAGGAGCTTCCCTGGAGGGGTTGAACTTCATGGTCTaGTGTAGGTTGGAGACACACCTCAACCAACGAAGTCACACCACC +
Preference number: 1 (lower is better)
Translates to: QGKSGASLEGLNFMV*CRLETHLNQRSHTT
Trigger: GGTGGTGTGACTTCGTTGGTTGAGGTGTGTCTCCAACCTACATCAGACCATGAAGTTCAACCCCTCCAGGGAAGCTCCTGATTTCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
3UTR GCA 90 bp TACGATAGCACATCCCGGACCCATATCTACCTCCCAGACCCACCTTaGTCCATGACGCTAAAGGCCACTCACTCCATGGTGAGAACTGAA +
Preference number: 1 (lower is better)
Translates to: YDSTSRTHIYLPDPP*SMTLKATHSMVRTE
Trigger: TTCAGTTCTCACCATGGAGTGAGTGGCCTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGGGATGTGCTATCGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
3UTR CCA 90 bp ACCTCAACCAACGAAGTCACACCACCGGCTGGAACAAGGAGGGGCTaGATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCAT +
Preference number: 1 (lower is better)
Translates to: TSTNEVTPPAGTRRG*IQHPMTVRRILIHH
Trigger: ATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCAGCCGGTGGTGTGACTTCGTTGGTTGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
3UTR TCA 90 bp ACCTTGCTCCATGACGCTAAAGGCCACTCACTCCATGGTGAGAACTaGACTCCTTTGAAGAAAAAGCAGTCGCACGAAATGTTAACATCA +
Preference number: 1 (lower is better)
Translates to: TLLHDAKGHSLHGEN*TPLKKKQSHEMLTS
Trigger: TGATGTTAACATTTCGTGCGACTGCTTTTTCTTCAAAGGAGTTCAGTTCTCACCATGGAGTGAGTGGCCTTTAGCGTCATGGAGCAAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
3UTR-3UTR TCA 90 bp CACACCACCGGCTGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGACATCACAGGCCCAATaGGGTAAACAGCAGACTCAG +
Preference number: 2 (lower is better)
Translates to: HTTGWNKEGLDTTSHDSETSQAQ*GKQQTQ
Trigger: CTGAGTCTGCTGTTTACCTCATTGGGCCTGTGATGT...CTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCAGCCGGTGGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
3UTR-3UTR GCA 90 bp AGCCTCTCCTACTTGGCTGAGCTCAGAGCAATTGAGCTCTTTGCAAATGCAAGTCTCCCAGACCCACCTTaGTCCATGACGCTAAAGGCC +
Preference number: 2 (lower is better)
Translates to: SLSYLAELRAIELFANASLPDPP*SMTLKA
Trigger: GGCCTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAG...ACTTGCATTTGCAAAGAGCTCAATTGCTCTGAGCTCAGCCAAGTAGGAGAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
3UTR-3UTR TCA 90 bp TCAATTATGCAGGGGAAATCAGGAGCTTCCCTGGAGGGGTTGAACTTCATGGTCACATCACAGGCCCAATaGGGTAAACAGCAGACTCAG +
Preference number: 2 (lower is better)
Translates to: SIMQGKSGASLEGLNFMVTSQAQ*GKQQTQ
Trigger: CTGAGTCTGCTGTTTACCTCATTGGGCCTGTGATGT...GACCATGAAGTTCAACCCCTCCAGGGAAGCTCCTGATTTCCCCTGCATAATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
3UTR-3UTR CCA 90 bp TCAATTATGCAGGGGAAATCAGGAGCTTCCCTGGAGGGGTTGAACTTCATGGTCGGAACAAGGAGGGGCTaGATACAACATCCCATGACA +
Preference number: 2 (lower is better)
Translates to: SIMQGKSGASLEGLNFMVGTRRG*IQHPMT
Trigger: TGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCC...GACCATGAAGTTCAACCCCTCCAGGGAAGCTCCTGATTTCCCCTGCATAATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
3UTR-3UTR CCA 90 bp CACACCACCGGCTGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGAAAAGAAAGAATGTTTaGGCAAGACTCAGACTCTCT +
Preference number: 2 (lower is better)
Translates to: HTTGWNKEGLDTTSHDSEKRKNV*ARLRLS
Trigger: AGAGAGTCTGAGTCTTGCCCAAACATTCTTTCTTTT...CTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCAGCCGGTGGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
3UTR-3UTR TCA 90 bp AACTCTGATAACTACGATAGCACATCCCGGACCCATATCTACCTCCCAGACCCAAGAACTGAACTCCTTTaGAGAAAAAGCAGTCGCACG +
Preference number: 2 (lower is better)
Translates to: NSDNYDSTSRTHIYLPDPRTELL*RKSSRT
Trigger: CGTGCGACTGCTTTTTCTTCAAAGGAGTTCAGTTCT...TGGGTCTGGGAGGTAGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
3UTR CAA 90 bp GGCCTAGCCTCTCCTACTTGGCTGAGCTCAGAGCAATTGAGCTCTTaGCAAATGCAAGTCATTTGGCACAAAAAGAAAGAATGTTTGGGC +
Preference number: 2 (lower is better)
Translates to: GLASPTWLSSEQLSS*QMQVIWHKKKECLG
Trigger: GCCCAAACATTCTTTCTTTTTGTGCCAAATGACTTGCATTTGCAAAGAGCTCAATTGCTCTGAGCTCAGCCAAGTAGGAGAGGCTAGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
3UTR-3UTR CCA 90 bp TGGTCTGATGTAGGTTGGAGACACACCTCAACCAACGAAGTCACACCACCGGCTAAAAGAAAGAATGTTTaGGCAAGACTCAGACTCTCT +
Preference number: 2 (lower is better)
Translates to: WSDVGWRHTSTNEVTPPAKRKNV*ARLRLS
Trigger: AGAGAGTCTGAGTCTTGCCCAAACATTCTTTCTTTT...AGCCGGTGGTGTGACTTCGTTGGTTGAGGTGTGTCTCCAACCTACATCAGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
3UTR-3UTR CCA 90 bp TCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTTCCTAAGACTAGCCTCTCCTACTTaGCTGAGCTCAGAGCAATTG +
Preference number: 2 (lower is better)
Translates to: SHDSEEDSYTSSLHSFLRLASPT*LSSEQL
Trigger: CAATTGCTCTGAGCTCAGCCAAGTAGGAGAGGCTAG...TCTTAGGAAGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
3UTR CAA 90 bp AAGAGTGATGGCCTAGCCTCTCCTACTTGGCTGAGCTCAGAGCAATaGAGCTCTTTGCAAATGCAAGTCATTTGGCACAAAAAGAAAGAA +
Preference number: 2 (lower is better)
Translates to: KSDGLASPTWLSSEQ*SSLQMQVIWHKKKE
Trigger: TTCTTTCTTTTTGTGCCAAATGACTTGCATTTGCAAAGAGCTCAATTGCTCTGAGCTCAGCCAAGTAGGAGAGGCTAGGCCATCACTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
3UTR-3UTR TCA 90 bp ACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTTCCCACTCACTCCATGGTaGGAACTGAACTCCTTTGAA +
Preference number: 2 (lower is better)
Translates to: TTSHDSEEDSYTSSLHSFPLTPW*ELNSFE
Trigger: TTCAAAGGAGTTCAGTTCTCACCATGGAGTGAGTGG...GAAGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
3UTR-3UTR GCA 90 bp CATTGGTGGACGCCTATTATAATAAACGGAAGGACCACAAAAATTAAAACAAGTCTCCCAGACCCACCTTaGTCCATGACGCTAAAGGCC +
Preference number: 2 (lower is better)
Translates to: HWWTPIIINGRTTKIKTSLPDPP*SMTLKA
Trigger: GGCCTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAG...ACTTGTTTTAATTTTTGTGGTCCTTCCGTTTATTATAATAGGCGTCCACCAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
3UTR CAA 90 bp TTGGCTGAGCTCAGAGCAATTGAGCTCTTTGCAAATGCAAGTCATTaGGCACAAAAAGAAAGAATGTTTGGGCAAGACTCAGACTCTCTC +
Preference number: 2 (lower is better)
Translates to: LAELRAIELFANASH*AQKERMFGQDSDSL
Trigger: GAGAGAGTCTGAGTCTTGCCCAAACATTCTTTCTTTTTGTGCCAAATGACTTGCATTTGCAAAGAGCTCAATTGCTCTGAGCTCAGCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
3UTR-3UTR TCA 90 bp CATATGGATAATCATTGGTGGACGCCTATTATAATAAACGGAAGGACCACAAAAAGAACTGAACTCCTTTaGAGAAAAAGCAGTCGCACG +
Preference number: 2 (lower is better)
Translates to: HMDNHWWTPIIINGRTTKRTELL*RKSSRT
Trigger: CGTGCGACTGCTTTTTCTTCAAAGGAGTTCAGTTCT...TTTTGTGGTCCTTCCGTTTATTATAATAGGCGTCCACCAATGATTATCCATATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
3UTR GCA 72 bp ACATCCCGGACCCATATCTACCTCCCAGACCCACCTTaGTCCATGACGCTAAAGGCCACTCACTCCATGGTG +
Preference number: 3 (lower is better)
Translates to: TSRTHIYLPDPP*SMTLKATHSMV
Trigger: CACCATGGAGTGAGTGGCCTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGGGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
3UTR-3UTR CAA 90 bp CACACCACCGGCTGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGCCTAGCCTCTCCTACTaGGCTGAGCTCAGAGCAATT +
Preference number: 3 (lower is better)
Translates to: HTTGWNKEGLDTTSHDSEPSLSY*AELRAI
Trigger: AATTGCTCTGAGCTCAGCCAAGTAGGAGAGGCTAGG...CTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCAGCCGGTGGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
3UTR CCA 72 bp GAGACACACCTCAACCAACGAAGTCACACCACCGGCTaGAACAAGGAGGGGCTGGATACAACATCCCATGAC +
Preference number: 3 (lower is better)
Translates to: ETHLNQRSHTTG*NKEGLDTTSHD
Trigger: GTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCAGCCGGTGGTGTGACTTCGTTGGTTGAGGTGTGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
3UTR-3UTR CAA 90 bp AGCCTCTCCTACTTGGCTGAGCTCAGAGCAATTGAGCTCTTTGCAAATGCAAGTCCTCCCAGACCCACCTaGCTCCATGACGCTAAAGGC +
Preference number: 3 (lower is better)
Translates to: SLSYLAELRAIELFANASPPRPT*LHDAKG
Trigger: GCCTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGG...ACTTGCATTTGCAAAGAGCTCAATTGCTCTGAGCTCAGCCAAGTAGGAGAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
3UTR CCA 72 bp AACGAAGTCACACCACCGGCTGGAACAAGGAGGGGCTaGATACAACATCCCATGACAGTGAGGAGGATTCTT +
Preference number: 3 (lower is better)
Translates to: NEVTPPAGTRRG*IQHPMTVRRIL
Trigger: AAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCAGCCGGTGGTGTGACTTCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
3UTR TCA 72 bp TCAGGAGCTTCCCTGGAGGGGTTGAACTTCATGGTCTaGTGTAGGTTGGAGACACACCTCAACCAACGAAGT +
Preference number: 3 (lower is better)
Translates to: SGASLEGLNFMV*CRLETHLNQRS
Trigger: ACTTCGTTGGTTGAGGTGTGTCTCCAACCTACATCAGACCATGAAGTTCAACCCCTCCAGGGAAGCTCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
3UTR-3UTR CAA 90 bp ACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTTCCCTCCCAGACCCACCTaGCTCCATGACGCTAAAGGC +
Preference number: 3 (lower is better)
Translates to: TTSHDSEEDSYTSSLHSFPPRPT*LHDAKG
Trigger: GCCTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGG...GAAGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
3UTR TCA 72 bp CATGACGCTAAAGGCCACTCACTCCATGGTGAGAACTaGACTCCTTTGAAGAAAAAGCAGTCGCACGAAATG +
Preference number: 3 (lower is better)
Translates to: HDAKGHSLHGEN*TPLKKKQSHEM
Trigger: CATTTCGTGCGACTGCTTTTTCTTCAAAGGAGTTCAGTTCTCACCATGGAGTGAGTGGCCTTTAGCGTCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
3UTR-3UTR CAA 90 bp TGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATAAAAAGAAAGAATGTTaGGGCAAGACTCAGACTCTC +
Preference number: 3 (lower is better)
Translates to: WNKEGLDTTSHDSEEDSYKKKEC*GKTQTL
Trigger: GAGAGTCTGAGTCTTGCCCAAACATTCTTTCTTTTT...ATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
3UTR-3UTR CAA 90 bp CATTGGTGGACGCCTATTATAATAAACGGAAGGACCACAAAAATTAAAACAAGTCTGAGCTCAGAGCAATaGAGCTCTTTGCAAATGCAA +
Preference number: 3 (lower is better)
Translates to: HWWTPIIINGRTTKIKTSLSSEQ*SSLQMQ
Trigger: TTGCATTTGCAAAGAGCTCAATTGCTCTGAGCTCAG...ACTTGTTTTAATTTTTGTGGTCCTTCCGTTTATTATAATAGGCGTCCACCAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
3UTR-3UTR CAA 90 bp CATATGGATAATCATTGGTGGACGCCTATTATAATAAACGGAAGGACCACAAAAAAAAAGAAAGAATGTTaGGGCAAGACTCAGACTCTC +
Preference number: 3 (lower is better)
Translates to: HMDNHWWTPIIINGRTTKKKKEC*GKTQTL
Trigger: GAGAGTCTGAGTCTTGCCCAAACATTCTTTCTTTTT...TTTTGTGGTCCTTCCGTTTATTATAATAGGCGTCCACCAATGATTATCCATATG
38% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp CCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGGCCACACCCGTCCCGCTGGGTaGGGTGGGCCACACACACAT +
Preference number: 4 (lower is better)
Translates to: PDPYLPPRPTLLHDAKGHTRPAG*GGPHTH
Trigger: ATGTGTGTGTGGCCCACCTCACCCAGCGGGACGGGT...GTGGCCTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGGCCACTGGTACCCGTCCCGCTaGGTGAGGTGGGCCACACAC +
Preference number: 4 (lower is better)
Translates to: PDPYLPPRPTLLHDAKGHWYPSR*VRWATH
Trigger: GTGTGTGGCCCACCTCACCCAGCGGGACGGGTACCA...GTGGCCTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp CACACCACCGGCTGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGCTGCCACGCTGCCTTTaGGAGGCAGAGGGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: HTTGWNKEGLDTTSHDSELPRCL*EAEGVG
Trigger: TCCCACCCCCTCTGCCTCTCAAAGGCAGCGTGGCAG...CTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCAGCCGGTGGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp CCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGGCCACCAGCTCCCAAGGCTCTaGATGCTCTTGCCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: PDPYLPPRPTLLHDAKGHQLPRL*MLLPVA
Trigger: GGCCACCGGCAAGAGCATGCAGAGCCTTGGGAGCTG...GTGGCCTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGGCCACTCCCGCTGGGTGAGGTaGGCCACACACACATCCTCC +
Preference number: 4 (lower is better)
Translates to: PDPYLPPRPTLLHDAKGHSRWVR*ATHTSS
Trigger: GGAGGATGTGTGTGTGGCCCACCTCACCCAGCGGGA...GTGGCCTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CACACCACCGGCTGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGGGAGGGGGTGTTTGCTaGGAGGACGGTGACGAGGGG +
Preference number: 4 (lower is better)
Translates to: HTTGWNKEGLDTTSHDSEGGGVC*EDGDEG
Trigger: CCCCTCGTCACCGTCCTCCCAGCAAACACCCCCTCC...CTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCAGCCGGTGGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp ACACACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATGAGAGGCAGAGGGGGTaGGACATCGGCCACGTCCGC +
Preference number: 4 (lower is better)
Translates to: THSEAPNSDNYDSTSRTHERQRG*DIGHVR
Trigger: GCGGACGTGGCCGATGTCCCACCCCCTCTGCCTCTC...ATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CACACCACCGGCTGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGGCTGGGCAGTGGAGGTaGCAGATGCCTCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: HTTGWNKEGLDTTSHDSEAGQWR*QMPLVW
Trigger: CCACACCAGAGGCATCTGCCACCTCCACTGCCCAGC...CTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCAGCCGGTGGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp CACACCACCGGCTGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGTCCCAAGGCTCTGCATaGTCTTGCCGGTGGCCGAGT +
Preference number: 4 (lower is better)
Translates to: HTTGWNKEGLDTTSHDSESQGSA*SCRWPS
Trigger: ACTCGGCCACCGGCAAGAGCATGCAGAGCCTTGGGA...CTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCAGCCGGTGGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp ACACACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATCGTCCGCCCCCGTCATaGCGTTCAGCTCCAAGCTCG +
Preference number: 4 (lower is better)
Translates to: THSEAPNSDNYDSTSRTHRPPPS*RSAPSS
Trigger: CGAGCTTGGAGCTGAACGGCATGACGGGGGCGGACG...ATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp TGGTCTGATGTAGGTTGGAGACACACCTCAACCAACGAAGTCACACCACCGGCTCGTCCGCCCCCGTCATaGCGTTCAGCTCCAAGCTCG +
Preference number: 4 (lower is better)
Translates to: WSDVGWRHTSTNEVTPPARPPPS*RSAPSS
Trigger: CGAGCTTGGAGCTGAACGGCATGACGGGGGCGGACG...AGCCGGTGGTGTGACTTCGTTGGTTGAGGTGTGTCTCCAACCTACATCAGACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp ACACACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATTCTCCTCGCGCTTGGTaGGCACCCAGCGCGTCATGG +
Preference number: 4 (lower is better)
Translates to: THSEAPNSDNYDSTSRTHSPRAW*APSASW
Trigger: CCATGACGCGCTGGGTGCCCACCAAGCGCGAGGAGA...ATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp TCAATTATGCAGGGGAAATCAGGAGCTTCCCTGGAGGGGTTGAACTTCATGGTCCCCTGCGTGGTGGCCTaGTACCCGTCCCGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: SIMQGKSGASLEGLNFMVPCVVA*YPSRWV
Trigger: CACCCAGCGGGACGGGTACCAGGCCACCACGCAGGG...GACCATGAAGTTCAACCCCTCCAGGGAAGCTCCTGATTTCCCCTGCATAATTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp ACACACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATGGAGGGGGTGTTTGCTaGGAGGACGGTGACGAGGGG +
Preference number: 4 (lower is better)
Translates to: THSEAPNSDNYDSTSRTHGGGVC*EDGDEG
Trigger: CCCCTCGTCACCGTCCTCCCAGCAAACACCCCCTCC...ATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp CACACCACCGGCTGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGATGAGGAAGGCATCGTaGAGGACCGCACCATGGACC +
Preference number: 4 (lower is better)
Translates to: HTTGWNKEGLDTTSHDSEMRKAS*RTAPWT
Trigger: GGTCCATGGTGCGGTCCTTCACGATGCCTTCCTCAT...CTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCAGCCGGTGGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp TGGTCTGATGTAGGTTGGAGACACACCTCAACCAACGAAGTCACACCACCGGCTTTGCTGGGAGGACGGTaGCGAGGGGGACACCGAGAA +
Preference number: 4 (lower is better)
Translates to: WSDVGWRHTSTNEVTPPALLGGR*RGGHRE
Trigger: TTCTCGGTGTCCCCCTCGTCACCGTCCTCCCAGCAA...AGCCGGTGGTGTGACTTCGTTGGTTGAGGTGTGTCTCCAACCTACATCAGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp TGGTCTGATGTAGGTTGGAGACACACCTCAACCAACGAAGTCACACCACCGGCTTCCTTCAGCTGTCCCTaGGTGGTGGCCTGGTACCCG +
Preference number: 4 (lower is better)
Translates to: WSDVGWRHTSTNEVTPPASFSCP*VVAWYP
Trigger: CGGGTACCAGGCCACCACGCAGGGACAGCTGAAGGA...AGCCGGTGGTGTGACTTCGTTGGTTGAGGTGTGTCTCCAACCTACATCAGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp ACATCCCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGGCTCGGCTAGCTCCTTaGCCAAGGCAATGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: TSRTHIYLPDPPCSMTLKARLAP*PRQWPP
Trigger: AGGAGGCCATTGCCTTGGGCAAGGAGCTAGCCGAGC...CTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGGGATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp ACATCCCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGACTGGAGGGGGTGTTTaGTGGGAGGACGGTGACGAG +
Preference number: 4 (lower is better)
Translates to: TSRTHIYLPDPPCSMTLKTGGGV*WEDGDE
Trigger: CTCGTCACCGTCCTCCCAGCAAACACCCCCTCCAGT...CTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGGGATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp CACACCACCGGCTGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGCCACCGATGCCTGCTTaGGAGTTGTCTTTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: HTTGWNKEGLDTTSHDSEPPMPA*ELSLEG
Trigger: CCCCTCCAAAGACAACTCGCAAGCAGGCATCGGTGG...CTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCAGCCGGTGGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CACACCACCGGCTGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGCGAGCCGCGACAGGATaGGGAGGAAAAAGTTTGCGG +
Preference number: 4 (lower is better)
Translates to: HTTGWNKEGLDTTSHDSERAATG*GGKSLR
Trigger: CCGCAAACTTTTTCCTCCCCATCCTGTCGCGGCTCG...CTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCAGCCGGTGGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280333.9
CDS-3UTR CCA 90 bp ACACACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATACTTCTCCTCGCGCTTaGTGGGCACCCAGCGCGTCA +
Preference number: 4 (lower is better)
Translates to: THSEAPNSDNYDSTSRTHTSPRA*WAPSAS
Trigger: TGACGCGCTGGGTGCCCACCAAGCGCGAGGAGAAGT...ATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp ACATCCCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGGCTGCCTCCAGATGGTaGACCACTCTCGGAGTGTCG +
Preference number: 4 (lower is better)
Translates to: TSRTHIYLPDPPCSMTLKAASRW*TTLGVS
Trigger: CGACACTCCGAGAGTGGTCCACCATCTGGAGGCAGC...CTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGGGATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp ACATCCCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGGACGTGCCTCTGGGTTaGCCCCACGTCCTTCCTGTA +
Preference number: 4 (lower is better)
Translates to: TSRTHIYLPDPPCSMTLKDVPLG*PHVLPV
Trigger: TACAGGAAGGACGTGGGGCCAACCCAGAGGCACGTC...CTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGGGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp ACATCCCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGATCTGGACGTGCCTCTaGGTTGGCCCCACGTCCTTC +
Preference number: 4 (lower is better)
Translates to: TSRTHIYLPDPPCSMTLKIWTCL*VGPTSF
Trigger: GAAGGACGTGGGGCCAACCCAGAGGCACGTCCAGAT...CTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGGGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp TGGTCTGATGTAGGTTGGAGACACACCTCAACCAACGAAGTCACACCACCGGCTTCCCGCTGGGTGAGGTaGGCCACACACACATCCTCC +
Preference number: 4 (lower is better)
Translates to: WSDVGWRHTSTNEVTPPASRWVR*ATHTSS
Trigger: GGAGGATGTGTGTGTGGCCCACCTCACCCAGCGGGA...AGCCGGTGGTGTGACTTCGTTGGTTGAGGTGTGTCTCCAACCTACATCAGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp TCAATTATGCAGGGGAAATCAGGAGCTTCCCTGGAGGGGTTGAACTTCATGGTCGCTGTCCCTGCGTGGTaGCCTGGTACCCGTCCCGCT +
Preference number: 4 (lower is better)
Translates to: SIMQGKSGASLEGLNFMVAVPAW*PGTRPA
Trigger: AGCGGGACGGGTACCAGGCCACCACGCAGGGACAGC...GACCATGAAGTTCAACCCCTCCAGGGAAGCTCCTGATTTCCCCTGCATAATTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CACACCACCGGCTGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGGCTGAGCTTGGCCCTTaGTGTAACTGGAGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: HTTGWNKEGLDTTSHDSEAELGP*CNWRGC
Trigger: ACACCCCCTCCAGTTACACCAAGGGCCAAGCTCAGC...CTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCAGCCGGTGGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp ACACACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATGCTGGGCAGTGGAGGTaGCAGATGCCTCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: THSEAPNSDNYDSTSRTHAGQWR*QMPLVW
Trigger: CCACACCAGAGGCATCTGCCACCTCCACTGCCCAGC...ATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp ACATCCCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGCGTACACAGACACCGTaGCCTCCACGTTCTTCGCTG +
Preference number: 4 (lower is better)
Translates to: TSRTHIYLPDPPCSMTLKRTQTP*PPRSSL
Trigger: CAGCGAAGAACGTGGAGGTCACGGTGTCTGTGTACG...CTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGGGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp ACACACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATTCCCAAGGCTCTGCATaGTCTTGCCGGTGGCCGAGT +
Preference number: 4 (lower is better)
Translates to: THSEAPNSDNYDSTSRTHSQGSA*SCRWPS
Trigger: ACTCGGCCACCGGCAAGAGCATGCAGAGCCTTGGGA...ATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp ACATCCCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGGCCTCAGGGTGCTCCTaGAGGTACCGGTCTGTAAAG +
Preference number: 4 (lower is better)
Translates to: TSRTHIYLPDPPCSMTLKASGCS*RYRSVK
Trigger: CTTTACAGACCGGTACCTGCAGGAGCACCCTGAGGC...CTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGGGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp ACATCCCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGGTGGAACGGCCTCAGTaGCTCCGTGACTTTGTCTCC +
Preference number: 4 (lower is better)
Translates to: TSRTHIYLPDPPCSMTLKVERPQ*LRDFVS
Trigger: GGAGACAAAGTCACGGAGGCACTGAGGCCGTTCCAC...CTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGGGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp CCAACTCTGATAACTACGATAGCACATCCCGGACCCATATCTACCTCCCAGACCGGCTTGCGACGTCACTaGACGATCCCGGAGTCCACC +
Preference number: 4 (lower is better)
Translates to: PTLITTIAHPGPISTSQTGLRRH*TIPEST
Trigger: GGTGGACTCCGGGATCGTGCAGTGACGTCGCAAGCC...GGTCTGGGAGGTAGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp ACACACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATGCTGCCTCCAGATGGTaGACCACTCTCGGAGTGTCG +
Preference number: 4 (lower is better)
Translates to: THSEAPNSDNYDSTSRTHAASRW*TTLGVS
Trigger: CGACACTCCGAGAGTGGTCCACCATCTGGAGGCAGC...ATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGGCCACCCGAGGTCAGTTTCCTaGTGTTGTTGTCCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PDPYLPPRPTLLHDAKGHPRSVS*CCCPSA
Trigger: AGCTGAGGGACAACAACACCAGGAAACTGACCTCGG...GTGGCCTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp ACATCCCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGGCAGCAGGCTGGTGTTaGAGCGCCATTTCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: TSRTHIYLPDPPCSMTLKAAGWC*SAISRA
Trigger: GGCTCTTGAAATGGCGCTCCAACACCAGCCTGCTGC...CTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGGGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp AACTCTGATAACTACGATAGCACATCCCGGACCCATATCTACCTCCCAGACCCATCAGCTGTCCCTGCGTaGTGGCCTGGTACCCGTCCC +
Preference number: 4 (lower is better)
Translates to: NSDNYDSTSRTHIYLPDPSAVPA*WPGTRP
Trigger: GGGACGGGTACCAGGCCACCACGCAGGGACAGCTGA...TGGGTCTGGGAGGTAGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CCAACTCTGATAACTACGATAGCACATCCCGGACCCATATCTACCTCCCAGACCGCCTCCATCCTCTCGTaGAACGGCCTCAGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: PTLITTIAHPGPISTSQTASILS*NGLSAS
Trigger: GGAGGCACTGAGGCCGTTCCACGAGAGGATGGAGGC...GGTCTGGGAGGTAGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CCAACTCTGATAACTACGATAGCACATCCCGGACCCATATCTACCTCCCAGACCCGTCGGAGCCTGGTCTaGAAGGGGTGCTGTCCGATG +
Preference number: 4 (lower is better)
Translates to: PTLITTIAHPGPISTSQTRRSLV*KGCCPM
Trigger: CATCGGACAGCACCCCTTCCAGACCAGGCTCCGACG...GGTCTGGGAGGTAGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
3UTR CAA 72 bp CACATCCCGGACCCATATCTACCTCCCAGACCCACCTaGCTCCATGACGCTAAAGGCCACTCACTCCATGGT +
Preference number: 4 (lower is better)
Translates to: HIPDPYLPPRPT*LHDAKGHSLHG
Trigger: ACCATGGAGTGAGTGGCCTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGGGATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp ACACACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATCCGGACGGTCTGGTCTaGCATGCTGCTCATCATGTC +
Preference number: 4 (lower is better)
Translates to: THSEAPNSDNYDSTSRTHPDGLV*HAAHHV
Trigger: GACATGATGAGCAGCATGTCAGACCAGACCGTCCGG...ATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp CCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGGCCACCCTCCTTCGACTTCATaGTCCAGCTTGGTGATGATC +
Preference number: 4 (lower is better)
Translates to: PDPYLPPRPTLLHDAKGHPPSTS*SSLVMI
Trigger: GATCATCACCAAGCTGGATCATGAAGTCGAAGGAGG...GTGGCCTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp CACACCACCGGCTGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGTCGGCGTTTGGAAACTaGGTTAAGAGCCGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: HTTGWNKEGLDTTSHDSESAFGN*VKSRAS
Trigger: TGAGGCTCGGCTCTTAACTCAGTTTCCAAACGCCGA...CTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCAGCCGGTGGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp ACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATATCTTGGGGATGGTGGCTTTaGGCAGCTCCGTCTCGGGAA +
Preference number: 4 (lower is better)
Translates to: TQRPPTLITTIAHPGPISWGWWL*AAPSRE
Trigger: TTCCCGAGACGGAGCTGCGCAAAGCCACCATCCCCA...AGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp CCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGGCCACCCTCCTCCCACATCTTaGCTTTGTCGAAGTAGTGGA +
Preference number: 4 (lower is better)
Translates to: PDPYLPPRPTLLHDAKGHPPPTS*LCRSSG
Trigger: TCCACTACTTCGACAAAGGCAAGATGTGGGAGGAGG...GTGGCCTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp ACATCCCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGGGGTCATCCAGGTGCTaGTGCACCATGCTGTTGATC +
Preference number: 4 (lower is better)
Translates to: TSRTHIYLPDPPCSMTLKGSSRC*CTMLLI
Trigger: GATCAACAGCATGGTGCAGCAGCACCTGGATGACCC...CTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGGGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp CCAACTCTGATAACTACGATAGCACATCCCGGACCCATATCTACCTCCCAGACCTCATGGGCCTCAGGGTaGTCCTGCAGGTACCGGTCT +
Preference number: 4 (lower is better)
Translates to: PTLITTIAHPGPISTSQTSWASG*SCRYRS
Trigger: AGACCGGTACCTGCAGGAGCACCCTGAGGCCCATGA...GGTCTGGGAGGTAGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp CACACCACCGGCTGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGAGCTCCAAGCTCGACTaGATGCTGAAGCTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: HTTGWNKEGLDTTSHDSESSKLD*MLKLSL
Trigger: CAAGCTCAGCTTCAGCATGCAGTCGAGCTTGGAGCT...CTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCAGCCGGTGGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CACACCACCGGCTGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGCCGAGGTCAGTTTCCTaGTGTTGTTGTCCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: HTTGWNKEGLDTTSHDSEPRSVS*CCCPSA
Trigger: AGCTGAGGGACAACAACACCAGGAAACTGACCTCGG...CTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCAGCCGGTGGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp TGGTCTGATGTAGGTTGGAGACACACCTCAACCAACGAAGTCACACCACCGGCTGCATGCTCTTGCCGGTaGCCGAGTGGCCCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: WSDVGWRHTSTNEVTPPAACSCR*PSGPFL
Trigger: AAGAAAAGGGCCACTCGGCCACCGGCAAGAGCATGC...AGCCGGTGGTGTGACTTCGTTGGTTGAGGTGTGTCTCCAACCTACATCAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp TGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATTGGTACCCGTCCCGCTaGGTGAGGTGGGCCACACAC +
Preference number: 4 (lower is better)
Translates to: WNKEGLDTTSHDSEEDSYWYPSR*VRWATH
Trigger: GTGTGTGGCCCACCTCACCCAGCGGGACGGGTACCA...ATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp CCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGGCCACCCACGAAGTTTCCAATaGGTTCAGAATCTCGTCCCA +
Preference number: 4 (lower is better)
Translates to: PDPYLPPRPTLLHDAKGHPRSFQ*VQNLVP
Trigger: TGGGACGAGATTCTGAACTCATTGGAAACTTCGTGG...GTGGCCTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp ACATCCCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGTCTGACACTGGCCTGTaGAACTTAGGAGGCAGATCG +
Preference number: 4 (lower is better)
Translates to: TSRTHIYLPDPPCSMTLKSDTGL*NLGGRS
Trigger: CGATCTGCCTCCTAAGTTTCACAGGCCAGTGTCAGA...CTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGGGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp TGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATTTGCTGGGAGGACGGTaGCGAGGGGGACACCGAGAA +
Preference number: 4 (lower is better)
Translates to: WNKEGLDTTSHDSEEDSYLLGGR*RGGHRE
Trigger: TTCTCGGTGTCCCCCTCGTCACCGTCCTCCCAGCAA...ATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp CACACCACCGGCTGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGCTTCCCTGGAGGGGTTaGACTTCATGGTCTGATGTA +
Preference number: 4 (lower is better)
Translates to: HTTGWNKEGLDTTSHDSELPWRG*TSWSDV
Trigger: TACATCAGACCATGAAGTTCAACCCCTCCAGGGAAG...CTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCAGCCGGTGGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp CCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGGCCACATGGACCTGAAGAGCTaGAGCAAAGATTCCACGAAG +
Preference number: 4 (lower is better)
Translates to: PDPYLPPRPTLLHDAKGHMDLKS*SKDSTK
Trigger: CTTCGTGGAATCTTTGCTGCAGCTCTTCAGGTCCAT...GTGGCCTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp CCAACTCTGATAACTACGATAGCACATCCCGGACCCATATCTACCTCCCAGACCGTGGAACGGCCTCAGTaGCTCCGTGACTTTGTCTCC +
Preference number: 4 (lower is better)
Translates to: PTLITTIAHPGPISTSQTVERPQ*LRDFVS
Trigger: GGAGACAAAGTCACGGAGGCACTGAGGCCGTTCCAC...GGTCTGGGAGGTAGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp ACACACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATACAGCCTCAGACTGCTaGAGGGAAATGTCGGTGGGT +
Preference number: 4 (lower is better)
Translates to: THSEAPNSDNYDSTSRTHTASDC*REMSVG
Trigger: ACCCACCGACATTTCCCTGCAGCAGTCTGAGGCTGT...ATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp ACATCCCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGATCACAGCCTCAGACTaGTGCAGGGAAATGTCGGTG +
Preference number: 4 (lower is better)
Translates to: TSRTHIYLPDPPCSMTLKITASD*CREMSV
Trigger: CACCGACATTTCCCTGCAGCAGTCTGAGGCTGTGAT...CTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGGGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp ACATCCCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGAAACCCTGCCCCTTGTaGTTGACTTCTTTGGCAGCG +
Preference number: 4 (lower is better)
Translates to: TSRTHIYLPDPPCSMTLKKPCPL*LTSLAA
Trigger: CGCTGCCAAAGAAGTCAACCACAAGGGGCAGGGTTT...CTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGGGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp TGGTCTGATGTAGGTTGGAGACACACCTCAACCAACGAAGTCACACCACCGGCTTTGCCGGTGGCCGAGTaGCCCTTTTCTTCCAACTCT +
Preference number: 4 (lower is better)
Translates to: WSDVGWRHTSTNEVTPPALPVAE*PFSSNS
Trigger: AGAGTTGGAAGAAAAGGGCCACTCGGCCACCGGCAA...AGCCGGTGGTGTGACTTCGTTGGTTGAGGTGTGTCTCCAACCTACATCAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp TCAATTATGCAGGGGAAATCAGGAGCTTCCCTGGAGGGGTTGAACTTCATGGTCATCTGGACGTGCCTCTaGGTTGGCCCCACGTCCTTC +
Preference number: 4 (lower is better)
Translates to: SIMQGKSGASLEGLNFMVIWTCL*VGPTSF
Trigger: GAAGGACGTGGGGCCAACCCAGAGGCACGTCCAGAT...GACCATGAAGTTCAACCCCTCCAGGGAAGCTCCTGATTTCCCCTGCATAATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACCCCTGCGTGGTGGCCTaGTACCCGTCCCGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LDTTSHDSEEDSYTSSLHPCVVA*YPSRWV
Trigger: CACCCAGCGGGACGGGTACCAGGCCACCACGCAGGG...GTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp TCAATTATGCAGGGGAAATCAGGAGCTTCCCTGGAGGGGTTGAACTTCATGGTCAAACCCGTCGGAGCCTaGTCTGGAAGGGGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: SIMQGKSGASLEGLNFMVKPVGA*SGRGAV
Trigger: GACAGCACCCCTTCCAGACCAGGCTCCGACGGGTTT...GACCATGAAGTTCAACCCCTCCAGGGAAGCTCCTGATTTCCCCTGCATAATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp TGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATGGTGGCAGATGCCTCTaGTGTGGAGGGGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: WNKEGLDTTSHDSEEDSYGGRCL*CGGGGG
Trigger: TCCACCTCCCCCTCCACACCAGAGGCATCTGCCACC...ATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CCAACTCTGATAACTACGATAGCACATCCCGGACCCATATCTACCTCCCAGACCGAGGCGGAGTTTTGCTaGGCAGTGGAGGTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: PTLITTIAHPGPISTSQTEAEFC*AVEVAD
Trigger: ATCTGCCACCTCCACTGCCCAGCAAAACTCCGCCTC...GGTCTGGGAGGTAGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CACACCACCGGCTGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGGGAACAAGGAGGGGCTaGATACAACATCCCATGACA +
Preference number: 4 (lower is better)
Translates to: HTTGWNKEGLDTTSHDSEGTRRG*IQHPMT
Trigger: TGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCC...CTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCAGCCGGTGGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp ACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATATCTGGAGGTCACCCGGGATaGCTGTTTCATGTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: TQRPPTLITTIAHPGPISGGHPG*LFHVAL
Trigger: AAGGGCAACATGAAACAGTCATCCCGGGTGACCTCC...AGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp TGGTCTGATGTAGGTTGGAGACACACCTCAACCAACGAAGTCACACCACCGGCTAAGGTAAACCGAAGGTaGCTGCGGTTAACGTCCTCG +
Preference number: 4 (lower is better)
Translates to: WSDVGWRHTSTNEVTPPAKVNRR*LRLTSS
Trigger: CGAGGACGTTAACCGCAGTCACCTTCGGTTTACCTT...AGCCGGTGGTGTGACTTCGTTGGTTGAGGTGTGTCTCCAACCTACATCAGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp TGGTCTGATGTAGGTTGGAGACACACCTCAACCAACGAAGTCACACCACCGGCTAGAAGGTCCACGTTCTaGGTCAGTTTGGTGGAGCAC +
Preference number: 4 (lower is better)
Translates to: WSDVGWRHTSTNEVTPPARRSTF*VSLVEH
Trigger: GTGCTCCACCAAACTGACTCAGAACGTGGACCTTCT...AGCCGGTGGTGTGACTTCGTTGGTTGAGGTGTGTCTCCAACCTACATCAGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp AACTCTGATAACTACGATAGCACATCCCGGACCCATATCTACCTCCCAGACCCACCGGACGGTCTGGTCTaGCATGCTGCTCATCATGTC +
Preference number: 4 (lower is better)
Translates to: NSDNYDSTSRTHIYLPDPPDGLV*HAAHHV
Trigger: GACATGATGAGCAGCATGTCAGACCAGACCGTCCGG...TGGGTCTGGGAGGTAGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp CACACCACCGGCTGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGTGTCGAAGTAGTGGATaGTTTCCTGGTAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: HTTGWNKEGLDTTSHDSECRSSG*FPGRAA
Trigger: AGCAGCTCTACCAGGAAATCATCCACTACTTCGACA...CTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCAGCCGGTGGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp CACACCACCGGCTGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGCTTTCCCTCGGTAAATaGAAACTTTTCCCCGCAGGA +
Preference number: 4 (lower is better)
Translates to: HTTGWNKEGLDTTSHDSELSLGK*KLFPAG
Trigger: TCCTGCGGGGAAAAGTTTTCATTTACCGAGGGAAAG...CTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCAGCCGGTGGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp CCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGGCCACACTTACAATCTGCTCTaGCACTGGCCTGTGAAACTT +
Preference number: 4 (lower is better)
Translates to: PDPYLPPRPTLLHDAKGHTYNLL*HWPVKL
Trigger: AAGTTTCACAGGCCAGTGTCAGAGCAGATTGTAAGT...GTGGCCTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp CACACCACCGGCTGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGTTTCCTTCAGCTGTTTaGAACAGGCCTCCATCCTCT +
Preference number: 4 (lower is better)
Translates to: HTTGWNKEGLDTTSHDSEFPSAV*NRPPSS
Trigger: AGAGGATGGAGGCCTGTTTCAAACAGCTGAAGGAAA...CTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCAGCCGGTGGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp CCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGGCCACTTGAACTTCATGGTCTaGTGTAGGTTGGAGACACAC +
Preference number: 4 (lower is better)
Translates to: PDPYLPPRPTLLHDAKGHLNFMV*CRLETH
Trigger: GTGTGTCTCCAACCTACATCAGACCATGAAGTTCAA...GTGGCCTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp ACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATATCTTCCAACGCGAGCGGCTaGAAGGGAATGAAATGCTGC +
Preference number: 4 (lower is better)
Translates to: TQRPPTLITTIAHPGPISSNASG*KGMKCC
Trigger: GCAGCATTTCATTCCCTTTCAGCCGCTCGCGTTGGA...AGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623213.2
CDS-3UTR GCA 90 bp TCAATTATGCAGGGGAAATCAGGAGCTTCCCTGGAGGGGTTGAACTTCATGGTCCTGGGGTCATCCAGGTaGTGCTGCACCATGCTGTTG +
Preference number: 4 (lower is better)
Translates to: SIMQGKSGASLEGLNFMVLGSSR*CCTMLL
Trigger: CAACAGCATGGTGCAGCAGCACCTGGATGACCCCAG...GACCATGAAGTTCAACCCCTCCAGGGAAGCTCCTGATTTCCCCTGCATAATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp TGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATTGGACCGGGGGCGGCTaGCTCTTCTATCATCCAGAC +
Preference number: 4 (lower is better)
Translates to: WNKEGLDTTSHDSEEDSYWTGGG*LFYHPD
Trigger: GTCTGGATGATAGAAGAGGCAGCCGCCCCCGGTCCA...ATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp ACACACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATGAGTCCACCGATGCCTaGTTGCGAGTTGTCTTTGGA +
Preference number: 4 (lower is better)
Translates to: THSEAPNSDNYDSTSRTHESTDA*LRVVFG
Trigger: TCCAAAGACAACTCGCAAGCAGGCATCGGTGGACTC...ATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp AGCCTCTCCTACTTGGCTGAGCTCAGAGCAATTGAGCTCTTTGCAAATGCAAGTGTCGTGGTGACTTCCTaGATGAGGGGGAGGTCACCC +
Preference number: 4 (lower is better)
Translates to: SLSYLAELRAIELFANASVVVTS*MRGRSP
Trigger: GGGTGACCTCCCCCTCATCCAGGAAGTCACCACGAC...ACTTGCATTTGCAAAGAGCTCAATTGCTCTGAGCTCAGCCAAGTAGGAGAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp ACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATATCTCAAAGAAGATGGGGATaGTGGCTTTGCGCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: TQRPPTLITTIAHPGPISQRRWG*WLCAAP
Trigger: CGGAGCTGCGCAAAGCCACCATCCCCATCTTCTTTG...AGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACGCTGTCCCTGCGTGGTaGCCTGGTACCCGTCCCGCT +
Preference number: 4 (lower is better)
Translates to: LDTTSHDSEEDSYTSSLHAVPAW*PGTRPA
Trigger: AGCGGGACGGGTACCAGGCCACCACGCAGGGACAGC...GTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp ACACACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATGAACATCACCAGGCATaGTTATCTCCGGAAACCCTG +
Preference number: 4 (lower is better)
Translates to: THSEAPNSDNYDSTSRTHEHHQA*LSPETL
Trigger: CAGGGTTTCCGGAGATAATCATGCCTGGTGATGTTC...ATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp ACACACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATAGTTGCAGGGACTCTTaGGTAAGGAAAGCAACAGCC +
Preference number: 4 (lower is better)
Translates to: THSEAPNSDNYDSTSRTHSCRDS*VRKATA
Trigger: GGCTGTTGCTTTCCTTACTCAAGAGTCCCTGCAACT...ATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp CACACCACCGGCTGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGACTTACAATCTGCTCTaGCACTGGCCTGTGAAACTT +
Preference number: 4 (lower is better)
Translates to: HTTGWNKEGLDTTSHDSETYNLL*HWPVKL
Trigger: AAGTTTCACAGGCCAGTGTCAGAGCAGATTGTAAGT...CTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCAGCCGGTGGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp ACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATATCTGCTGCACCATGCTGTTaGTCTTGTCGTTCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: TQRPPTLITTIAHPGPISAAPCC*SCRSSA
Trigger: AGCTGACGAACGACAAGATCAACAGCATGGTGCAGC...AGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp CCAACTCTGATAACTACGATAGCACATCCCGGACCCATATCTACCTCCCAGACCGCCTTTCGCTTCCAATaGCGTTCATCACCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: PTLITTIAHPGPISTSQTAFRFQ*RSSPGS
Trigger: AGAGCCAGGTGATGAACGTCATTGGAAGCGAAAGGC...GGTCTGGGAGGTAGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp CTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACCTGCCACGCTGCCTTTaGGAGGCAGAGGGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: LDTTSHDSEEDSYTSSLHLPRCL*EAEGVG
Trigger: TCCCACCCCCTCTGCCTCTCAAAGGCAGCGTGGCAG...GTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp ACACACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATCTTCCCTGGAGGGGTTaGACTTCATGGTCTGATGTA +
Preference number: 4 (lower is better)
Translates to: THSEAPNSDNYDSTSRTHLPWRG*TSWSDV
Trigger: TACATCAGACCATGAAGTTCAACCCCTCCAGGGAAG...ATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp ACACACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATCTTTTCTTCCAACTCTaGCTTCGTGGAGGGCAGACT +
Preference number: 4 (lower is better)
Translates to: THSEAPNSDNYDSTSRTHLFFQL*LRGGQT
Trigger: AGTCTGCCCTCCACGAAGGCAGAGTTGGAAGAAAAG...ATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp ACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTTCGGCTCTGCATGCTCTTaGCGGTGGCCGAGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: TTSHDSEEDSYTSSLHSFGSACS*RWPSGP
Trigger: AGGGCCACTCGGCCACCGGCAAGAGCATGCAGAGCC...GAAGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp AACTCTGATAACTACGATAGCACATCCCGGACCCATATCTACCTCCCAGACCCATGCCTCAAGTTCTGCTaGAGCAGGCTGGTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: NSDNYDSTSRTHIYLPDPCLKFC*SRLVLE
Trigger: CTCCAACACCAGCCTGCTGCAGCAGAACTTGAGGCA...TGGGTCTGGGAGGTAGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp TCAATTATGCAGGGGAAATCAGGAGCTTCCCTGGAGGGGTTGAACTTCATGGTCAGCTGCCTCAAGTTCTaGTGCAGCAGGCTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: SIMQGKSGASLEGLNFMVSCLKF*CSRLVL
Trigger: CAACACCAGCCTGCTGCAGCAGAACTTGAGGCAGCT...GACCATGAAGTTCAACCCCTCCAGGGAAGCTCCTGATTTCCCCTGCATAATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp ACACACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATATTTCGTTCTCATACTaGTCGGCTAGCTCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: THSEAPNSDNYDSTSRTHISFSY*SASSLP
Trigger: GGGCAAGGAGCTAGCCGAGCAGTATGAGAACGAAAT...ATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp AACTCTGATAACTACGATAGCACATCCCGGACCCATATCTACCTCCCAGACCCAGGGTCATCCAGGTGCTaGTGCACCATGCTGTTGATC +
Preference number: 4 (lower is better)
Translates to: NSDNYDSTSRTHIYLPDPGSSRC*CTMLLI
Trigger: GATCAACAGCATGGTGCAGCAGCACCTGGATGACCC...TGGGTCTGGGAGGTAGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp TGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATCTGGGGTCATCCAGGTaGTGCTGCACCATGCTGTTG +
Preference number: 4 (lower is better)
Translates to: WNKEGLDTTSHDSEEDSYLGSSR*CCTMLL
Trigger: CAACAGCATGGTGCAGCAGCACCTGGATGACCCCAG...ATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp CCAACTCTGATAACTACGATAGCACATCCCGGACCCATATCTACCTCCCAGACCAGCTCCAAGCTCGACTaGATGCTGAAGCTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: PTLITTIAHPGPISTSQTSSKLD*MLKLSL
Trigger: CAAGCTCAGCTTCAGCATGCAGTCGAGCTTGGAGCT...GGTCTGGGAGGTAGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp AGCCTCTCCTACTTGGCTGAGCTCAGAGCAATTGAGCTCTTTGCAAATGCAAGTCCCGGAGTCCACCGATaGCTGCTTGCGAGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: SLSYLAELRAIELFANASPGVHR*LLASCL
Trigger: AAGACAACTCGCAAGCAGGCATCGGTGGACTCCGGG...ACTTGCATTTGCAAAGAGCTCAATTGCTCTGAGCTCAGCCAAGTAGGAGAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp AACTCCTTTGAAGAAAAAGCAGTCGCACGAAATGTTAACATCACAGGCCCAATGTCTCCTCGCGCTTGGTaGGCACCCAGCGCGTCATGG +
Preference number: 4 (lower is better)
Translates to: NSFEEKAVARNVNITGPMSPRAW*APSASW
Trigger: CCATGACGCGCTGGGTGCCCACCAAGCGCGAGGAGA...CATTGGGCCTGTGATGTTAACATTTCGTGCGACTGCTTTTTCTTCAAAGGAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp TGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATAGAGCTGCCTCCAGATaGTGGACCACTCTCGGAGTG +
Preference number: 4 (lower is better)
Translates to: WNKEGLDTTSHDSEEDSYRAASR*WTTLGV
Trigger: CACTCCGAGAGTGGTCCACCATCTGGAGGCAGCTCT...ATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp ACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATATCTAAACCCTGCCCCTTGTaGTTGACTTCTTTGGCAGCG +
Preference number: 4 (lower is better)
Translates to: TQRPPTLITTIAHPGPISKPCPL*LTSLAA
Trigger: CGCTGCCAAAGAAGTCAACCACAAGGGGCAGGGTTT...AGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp AACTCTGATAACTACGATAGCACATCCCGGACCCATATCTACCTCCCAGACCCATTGCCGGTGGCCGAGTaGCCCTTTTCTTCCAACTCT +
Preference number: 4 (lower is better)
Translates to: NSDNYDSTSRTHIYLPDPLPVAE*PFSSNS
Trigger: AGAGTTGGAAGAAAAGGGCCACTCGGCCACCGGCAA...TGGGTCTGGGAGGTAGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp ACACACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATACGAGCGTGGAGATCTaGAAGGAGTCCTTGCTAATG +
Preference number: 4 (lower is better)
Translates to: THSEAPNSDNYDSTSRTHTSVEI*KESLLM
Trigger: CATTAGCAAGGACTCCTTCCAGATCTCCACGCTCGT...ATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp TCAATTATGCAGGGGAAATCAGGAGCTTCCCTGGAGGGGTTGAACTTCATGGTCTGGAGCACACGAGCGTaGAGATCTGGAAGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: SIMQGKSGASLEGLNFMVWSTRA*RSGRSP
Trigger: AGGACTCCTTCCAGATCTCCACGCTCGTGTGCTCCA...GACCATGAAGTTCAACCCCTCCAGGGAAGCTCCTGATTTCCCCTGCATAATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp ACATCCCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGAGTAGAGTTTCTGGATaGTCAGCAAGCCCATGGGAA +
Preference number: 4 (lower is better)
Translates to: TSRTHIYLPDPPCSMTLKSRVSG*SASPWE
Trigger: TTCCCATGGGCTTGCTGACCATCCAGAAACTCTACT...CTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGGGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp ACACACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATGTGACTTTGTCTCCATaGATTCTGATCCCTTCGGCC +
Preference number: 4 (lower is better)
Translates to: THSEAPNSDNYDSTSRTHVTLSP*ILIPSA
Trigger: GGCCGAAGGGATCAGAATCCATGGAGACAAAGTCAC...ATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CAAAAAGAAAGAATGTTTGGGCAAGACTCAGACTCTCTCAGAGCCAGACACACTGCCTCCATCCTCTCGTaGAACGGCCTCAGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: QKERMFGQDSDSLRARHTASILS*NGLSAS
Trigger: GGAGGCACTGAGGCCGTTCCACGAGAGGATGGAGGC...AGTGTGTCTGGCTCTGAGAGAGTCTGAGTCTTGCCCAAACATTCTTTCTTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp TGGTCTGATGTAGGTTGGAGACACACCTCAACCAACGAAGTCACACCACCGGCTGCTTGTCCTGGGACCTaGAGTGCATTTTCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: WSDVGWRHTSTNEVTPPAACPGT*SAFSLA
Trigger: TGCCAAAGAAAATGCACTCCAGGTCCCAGGACAAGC...AGCCGGTGGTGTGACTTCGTTGGTTGAGGTGTGTCTCCAACCTACATCAGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp TGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATGGCCCTTGGTGTAACTaGAGGGGGTGTTTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: WNKEGLDTTSHDSEEDSYGPWCN*RGCLLG
Trigger: TCCCAGCAAACACCCCCTCCAGTTACACCAAGGGCC...ATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp AGCCTCTCCTACTTGGCTGAGCTCAGAGCAATTGAGCTCTTTGCAAATGCAAGTGCTGAGCTTGGCCCTTaGTGTAACTGGAGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: SLSYLAELRAIELFANASAELGP*CNWRGC
Trigger: ACACCCCCTCCAGTTACACCAAGGGCCAAGCTCAGC...ACTTGCATTTGCAAAGAGCTCAATTGCTCTGAGCTCAGCCAAGTAGGAGAGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp ATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTGAGAGGCAGAGGGGGTaGGACATCGGCCACGTCCGC +
Preference number: 4 (lower is better)
Translates to: IQHPMTVRRILIHHHYTAERQRG*DIGHVR
Trigger: GCGGACGTGGCCGATGTCCCACCCCCTCTGCCTCTC...AGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp ACACACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATCTAGCCTCTCCTACTTaGCTGAGCTCAGAGCAATTG +
Preference number: 4 (lower is better)
Translates to: THSEAPNSDNYDSTSRTHLASPT*LSSEQL
Trigger: CAATTGCTCTGAGCTCAGCCAAGTAGGAGAGGCTAG...ATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp TGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATAGTCACACCACCGGCTaGAACAAGGAGGGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: WNKEGLDTTSHDSEEDSYSHTTG*NKEGLD
Trigger: ATCCAGCCCCTCCTTGTTCCAGCCGGTGGTGTGACT...ATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp CCAACTCTGATAACTACGATAGCACATCCCGGACCCATATCTACCTCCCAGACCGAACATCACCAGGCATaGTTATCTCCGGAAACCCTG +
Preference number: 4 (lower is better)
Translates to: PTLITTIAHPGPISTSQTEHHQA*LSPETL
Trigger: CAGGGTTTCCGGAGATAATCATGCCTGGTGATGTTC...GGTCTGGGAGGTAGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp ACATCCCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGGCATCCAACGTGTCCTaGAGAAACTTCACTACTTCA +
Preference number: 4 (lower is better)
Translates to: TSRTHIYLPDPPCSMTLKASNVS*RNFTTS
Trigger: TGAAGTAGTGAAGTTTCTTCAGGACACGTTGGATGC...CTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGGGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp ACACACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATTTTCCTTCAGCTGTTTaGAACAGGCCTCCATCCTCT +
Preference number: 4 (lower is better)
Translates to: THSEAPNSDNYDSTSRTHFPSAV*NRPPSS
Trigger: AGAGGATGGAGGCCTGTTTCAAACAGCTGAAGGAAA...ATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp ACATCCCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGAGAACTGAACTCCTTTaGAGAAAAAGCAGTCGCACG +
Preference number: 4 (lower is better)
Translates to: TSRTHIYLPDPPCSMTLKRTELL*RKSSRT
Trigger: CGTGCGACTGCTTTTTCTTCAAAGGAGTTCAGTTCT...CTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGGGATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp ACACACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATCCACTCACTCCATGGTaGGAACTGAACTCCTTTGAA +
Preference number: 4 (lower is better)
Translates to: THSEAPNSDNYDSTSRTHPLTPW*ELNSFE
Trigger: TTCAAAGGAGTTCAGTTCTCACCATGGAGTGAGTGG...ATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp ACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATATCTGTTACCCACAAACCCTaGCCCTTGTGGTTGACTTCT +
Preference number: 4 (lower is better)
Translates to: TQRPPTLITTIAHPGPISVTHKP*PLWLTS
Trigger: AGAAGTCAACCACAAGGGGCAGGGTTTGTGGGTAAC...AGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp ACACACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATCCCGGGAAAATCACATaGTCTAATCGTTTCCCATCC +
Preference number: 4 (lower is better)
Translates to: THSEAPNSDNYDSTSRTHPGKIT*SNRFPS
Trigger: GGATGGGAAACGATTAGAGCATGTGATTTTCCCGGG...ATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp ACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATATCTCTTTTCTTCCAACTCTaGCTTCGTGGAGGGCAGACT +
Preference number: 4 (lower is better)
Translates to: TQRPPTLITTIAHPGPISLFFQL*LRGGQT
Trigger: AGTCTGCCCTCCACGAAGGCAGAGTTGGAAGAAAAG...AGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp TGGTCTGATGTAGGTTGGAGACACACCTCAACCAACGAAGTCACACCACCGGCTACTGTTCGTCTCCTCTaGCTCCTTCGACTTCATGAT +
Preference number: 4 (lower is better)
Translates to: WSDVGWRHTSTNEVTPPATVRLL*LLRLHD
Trigger: ATCATGAAGTCGAAGGAGGCAGAGGAGACGAACAGT...AGCCGGTGGTGTGACTTCGTTGGTTGAGGTGTGTCTCCAACCTACATCAGACCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp ACATCCCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGTTATCACACTCCTTGTaGAGGTCACAGAGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: TSRTHIYLPDPPCSMTLKLSHSL*RSQSLY
Trigger: GTACAAGCTCTGTGACCTGCACAAGGAGTGTGATAA...CTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGGGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp ACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTTCTCCTTCAGCTGTCCCTaGGTGGTGGCCTGGTACCCG +
Preference number: 4 (lower is better)
Translates to: TTSHDSEEDSYTSSLHSFSFSCP*VVAWYP
Trigger: CGGGTACCAGGCCACCACGCAGGGACAGCTGAAGGA...GAAGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp CCAACTCTGATAACTACGATAGCACATCCCGGACCCATATCTACCTCCCAGACCCCTCCTCCCACATCTTaGCTTTGTCGAAGTAGTGGA +
Preference number: 4 (lower is better)
Translates to: PTLITTIAHPGPISTSQTPPPTS*LCRSSG
Trigger: TCCACTACTTCGACAAAGGCAAGATGTGGGAGGAGG...GGTCTGGGAGGTAGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp TGGTCTGATGTAGGTTGGAGACACACCTCAACCAACGAAGTCACACCACCGGCTTTGTCGTTCGTCAGCTaGATGGTCTCAATGGCATTC +
Preference number: 4 (lower is better)
Translates to: WSDVGWRHTSTNEVTPPALSFVS*MVSMAF
Trigger: GAATGCCATTGAGACCATGCAGCTGACGAACGACAA...AGCCGGTGGTGTGACTTCGTTGGTTGAGGTGTGTCTCCAACCTACATCAGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp CAAAAAGAAAGAATGTTTGGGCAAGACTCAGACTCTCTCAGAGCCAGACACACTTCATGGGCCTCAGGGTaGTCCTGCAGGTACCGGTCT +
Preference number: 4 (lower is better)
Translates to: QKERMFGQDSDSLRARHTSWASG*SCRYRS
Trigger: AGACCGGTACCTGCAGGAGCACCCTGAGGCCCATGA...AGTGTGTCTGGCTCTGAGAGAGTCTGAGTCTTGCCCAAACATTCTTTCTTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp AGCCTCTCCTACTTGGCTGAGCTCAGAGCAATTGAGCTCTTTGCAAATGCAAGTACAGCCTCAGACTGCTaGAGGGAAATGTCGGTGGGT +
Preference number: 4 (lower is better)
Translates to: SLSYLAELRAIELFANASTASDC*REMSVG
Trigger: ACCCACCGACATTTCCCTGCAGCAGTCTGAGGCTGT...ACTTGCATTTGCAAAGAGCTCAATTGCTCTGAGCTCAGCCAAGTAGGAGAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp TCAATTATGCAGGGGAAATCAGGAGCTTCCCTGGAGGGGTTGAACTTCATGGTCATCACAGCCTCAGACTaGTGCAGGGAAATGTCGGTG +
Preference number: 4 (lower is better)
Translates to: SIMQGKSGASLEGLNFMVITASD*CREMSV
Trigger: CACCGACATTTCCCTGCAGCAGTCTGAGGCTGTGAT...GACCATGAAGTTCAACCCCTCCAGGGAAGCTCCTGATTTCCCCTGCATAATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp ACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATATCTCAAATTCCCGTAATCTaGCACGCTGCCTTTGAGAGG +
Preference number: 4 (lower is better)
Translates to: TQRPPTLITTIAHPGPISQIPVI*HAAFER
Trigger: CCTCTCAAAGGCAGCGTGGCAGATTACGGGAATTTG...AGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp TCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTTCCTAAGAGGCTTGCGACGTCACTaGACGATCCCGGAGTCCACC +
Preference number: 4 (lower is better)
Translates to: SHDSEEDSYTSSLHSFLRGLRRH*TIPEST
Trigger: GGTGGACTCCGGGATCGTGCAGTGACGTCGCAAGCC...TCTTAGGAAGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp AACTCCTTTGAAGAAAAAGCAGTCGCACGAAATGTTAACATCACAGGCCCAATGACTTCTCCTCGCGCTTaGTGGGCACCCAGCGCGTCA +
Preference number: 4 (lower is better)
Translates to: NSFEEKAVARNVNITGPMTSPRA*WAPSAS
Trigger: TGACGCGCTGGGTGCCCACCAAGCGCGAGGAGAAGT...CATTGGGCCTGTGATGTTAACATTTCGTGCGACTGCTTTTTCTTCAAAGGAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp TCAATTATGCAGGGGAAATCAGGAGCTTCCCTGGAGGGGTTGAACTTCATGGTCTTCGAGCCACAGCTGTaGTCCTGTCCACTAAATGCG +
Preference number: 4 (lower is better)
Translates to: SIMQGKSGASLEGLNFMVFEPQL*SCPLNA
Trigger: CGCATTTAGTGGACAGGACCACAGCTGTGGCTCGAA...GACCATGAAGTTCAACCCCTCCAGGGAAGCTCCTGATTTCCCCTGCATAATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp ACATCCCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGAGTCTCAAACCAGCGTaGCTGCTTTACTTGGTAGTA +
Preference number: 4 (lower is better)
Translates to: TSRTHIYLPDPPCSMTLKSLKPA*LLYLVV
Trigger: TACTACCAAGTAAAGCAGCCACGCTGGTTTGAGACT...CTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGGGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CCAACTCTGATAACTACGATAGCACATCCCGGACCCATATCTACCTCCCAGACCGCAGACTCAAGTACGTaGCAGCATCTTCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: PTLITTIAHPGPISTSQTADSST*QHLPAS
Trigger: AGAAGCTGGAAGATGCTGCCACGTACTTGAGTCTGC...GGTCTGGGAGGTAGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp AACTCTGATAACTACGATAGCACATCCCGGACCCATATCTACCTCCCAGACCCATCTGAGTCAGTTTGGTaGAGCACACGAGCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: NSDNYDSTSRTHIYLPDPSESVW*STRAWR
Trigger: TCTCCACGCTCGTGTGCTCCACCAAACTGACTCAGA...TGGGTCTGGGAGGTAGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp TGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATTTCACCCGGACGGTCTaGTCTGACATGCTGCTCATC +
Preference number: 4 (lower is better)
Translates to: WNKEGLDTTSHDSEEDSYFTRTV*SDMLLI
Trigger: GATGAGCAGCATGTCAGACCAGACCGTCCGGGTGAA...ATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp TGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATCAAAGAAGATGGGGATaGTGGCTTTGCGCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: WNKEGLDTTSHDSEEDSYQRRWG*WLCAAP
Trigger: CGGAGCTGCGCAAAGCCACCATCCCCATCTTCTTTG...ATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CACACCACCGGCTGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGAAGTTTCTCCTGTTTTaGCGAGGTATTTGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: HTTGWNKEGLDTTSHDSEKFLLF*RGICAS
Trigger: GGAAGCACAAATACCTCGCCAAAACAGGAGAAACTT...CTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCAGCCGGTGGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp ATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTTCAGCTGTCCCTGCGTaGTGGCCTGGTACCCGTCCC +
Preference number: 4 (lower is better)
Translates to: IQHPMTVRRILIHHHYTASAVPA*WPGTRP
Trigger: GGGACGGGTACCAGGCCACCACGCAGGGACAGCTGA...AGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp AGCCTCTCCTACTTGGCTGAGCTCAGAGCAATTGAGCTCTTTGCAAATGCAAGTTTCCCCGCAGGAATGTaGGGAACCCTTGTCCGTAGT +
Preference number: 4 (lower is better)
Translates to: SLSYLAELRAIELFANASFPAGM*GTLVRS
Trigger: ACTACGGACAAGGGTTCCCCACATTCCTGCGGGGAA...ACTTGCATTTGCAAAGAGCTCAATTGCTCTGAGCTCAGCCAAGTAGGAGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGGCCACAATATCGTCGCCTGGTaGAGATGTTGTCTTCATTTT +
Preference number: 4 (lower is better)
Translates to: PDPYLPPRPTLLHDAKGHNIVAW*RCCLHF
Trigger: AAAATGAAGACAACATCTCCACCAGGCGACGATATT...GTGGCCTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp AACTCCTTTGAAGAAAAAGCAGTCGCACGAAATGTTAACATCACAGGCCCAATGCGTCGGAGCCTGGTCTaGAAGGGGTGCTGTCCGATG +
Preference number: 4 (lower is better)
Translates to: NSFEEKAVARNVNITGPMRRSLV*KGCCPM
Trigger: CATCGGACAGCACCCCTTCCAGACCAGGCTCCGACG...CATTGGGCCTGTGATGTTAACATTTCGTGCGACTGCTTTTTCTTCAAAGGAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp TGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATGGAGTGCATTTTCTTTaGCAGGAGAGGCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: WNKEGLDTTSHDSEEDSYGVHFL*QERLQG
Trigger: GCCCTGGAGCCTCTCCTGCCAAAGAAAATGCACTCC...ATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp TGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATTCTCCCCTGCCACCCTaGGTGAAAAACGGGATGACA +
Preference number: 4 (lower is better)
Translates to: WNKEGLDTTSHDSEEDSYSPLPP*VKNGMT
Trigger: TGTCATCCCGTTTTTCACCCAGGGTGGCAGGGGAGA...ATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000623213.2
CDS-3UTR TCA 90 bp CCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGGCCACTTAGAAGCTATTTCATaGGCTCTGAAGAGACTAATC +
Preference number: 4 (lower is better)
Translates to: PDPYLPPRPTLLHDAKGHLEAIS*ALKRLI
Trigger: GATTAGTCTCTTCAGAGCTCATGAAATAGCTTCTAA...GTGGCCTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp TGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATAAGGTAAACCGAAGGTaGCTGCGGTTAACGTCCTCG +
Preference number: 4 (lower is better)
Translates to: WNKEGLDTTSHDSEEDSYKVNRR*LRLTSS
Trigger: CGAGGACGTTAACCGCAGTCACCTTCGGTTTACCTT...ATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp TGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATTCGGCGTTTGGAAACTaGGTTAAGAGCCGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: WNKEGLDTTSHDSEEDSYSAFGN*VKSRAS
Trigger: TGAGGCTCGGCTCTTAACTCAGTTTCCAAACGCCGA...ATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp TGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATGCTGCACCATGCTGTTaGTCTTGTCGTTCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: WNKEGLDTTSHDSEEDSYAAPCC*SCRSSA
Trigger: AGCTGACGAACGACAAGATCAACAGCATGGTGCAGC...ATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp ACATCCCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGAAGCAATCAGGTCCTTaGGCTTCTCGATCTTTTCAT +
Preference number: 4 (lower is better)
Translates to: TSRTHIYLPDPPCSMTLKKQSGP*ASRSFH
Trigger: ATGAAAAGATCGAGAAGCTCAAGGACCTGATTGCTT...CTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGGGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp CAAAAAGAAAGAATGTTTGGGCAAGACTCAGACTCTCTCAGAGCCAGACACACTATGAGGAAGGCATCGTaGAGGACCGCACCATGGACC +
Preference number: 4 (lower is better)
Translates to: QKERMFGQDSDSLRARHTMRKAS*RTAPWT
Trigger: GGTCCATGGTGCGGTCCTTCACGATGCCTTCCTCAT...AGTGTGTCTGGCTCTGAGAGAGTCTGAGTCTTGCCCAAACATTCTTTCTTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp AACTCCTTTGAAGAAAAAGCAGTCGCACGAAATGTTAACATCACAGGCCCAATGAGGGGTGCTGTCCGATaGGAGGGAAGAGACAGAGGC +
Preference number: 4 (lower is better)
Translates to: NSFEEKAVARNVNITGPMRGAVR*EGRDRG
Trigger: GCCTCTGTCTCTTCCCTCTCATCGGACAGCACCCCT...CATTGGGCCTGTGATGTTAACATTTCGTGCGACTGCTTTTTCTTCAAAGGAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp AGCCTCTCCTACTTGGCTGAGCTCAGAGCAATTGAGCTCTTTGCAAATGCAAGTGCCTTTCGCTTCCAATaGCGTTCATCACCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: SLSYLAELRAIELFANASAFRFQ*RSSPGS
Trigger: AGAGCCAGGTGATGAACGTCATTGGAAGCGAAAGGC...ACTTGCATTTGCAAAGAGCTCAATTGCTCTGAGCTCAGCCAAGTAGGAGAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp AGCCTCTCCTACTTGGCTGAGCTCAGAGCAATTGAGCTCTTTGCAAATGCAAGTGGCCAGAGAAGGGGTTaGAGCAAACTTGGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: SLSYLAELRAIELFANASGQRRG*SKLGLS
Trigger: AGACAAGCCAAGTTTGCTGCAACCCCTTCTCTGGCC...ACTTGCATTTGCAAAGAGCTCAATTGCTCTGAGCTCAGCCAAGTAGGAGAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp ACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATATCTATGGCTTTGTACAGCTaGTCATTTACTCCCGGCTTC +
Preference number: 4 (lower is better)
Translates to: TQRPPTLITTIAHPGPISMALYS*SFTPGF
Trigger: GAAGCCGGGAGTAAATGAGCAGCTGTACAAAGCCAT...AGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp AACTCCTTTGAAGAAAAAGCAGTCGCACGAAATGTTAACATCACAGGCCCAATGGCTCGGCTAGCTCCTTaGCCAAGGCAATGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: NSFEEKAVARNVNITGPMARLAP*PRQWPP
Trigger: AGGAGGCCATTGCCTTGGGCAAGGAGCTAGCCGAGC...CATTGGGCCTGTGATGTTAACATTTCGTGCGACTGCTTTTTCTTCAAAGGAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp ACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATATCTTTGTCGTTCGTCAGCTaGATGGTCTCAATGGCATTC +
Preference number: 4 (lower is better)
Translates to: TQRPPTLITTIAHPGPISLSFVS*MVSMAF
Trigger: GAATGCCATTGAGACCATGCAGCTGACGAACGACAA...AGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp ACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTTCTGGACCGGGGGCGGCTaGCTCTTCTATCATCCAGAC +
Preference number: 4 (lower is better)
Translates to: TTSHDSEEDSYTSSLHSFWTGGG*LFYHPD
Trigger: GTCTGGATGATAGAAGAGGCAGCCGCCCCCGGTCCA...GAAGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp AACTCCTTTGAAGAAAAAGCAGTCGCACGAAATGTTAACATCACAGGCCCAATGACTGGAGGGGGTGTTTaGTGGGAGGACGGTGACGAG +
Preference number: 4 (lower is better)
Translates to: NSFEEKAVARNVNITGPMTGGGV*WEDGDE
Trigger: CTCGTCACCGTCCTCCCAGCAAACACCCCCTCCAGT...CATTGGGCCTGTGATGTTAACATTTCGTGCGACTGCTTTTTCTTCAAAGGAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp TCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTTCCTAAGAGAGGAGGCGGAGTTTTaGTGGGCAGTGGAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: SHDSEEDSYTSSLHSFLREEAEF*WAVEVA
Trigger: TGCCACCTCCACTGCCCAGCAAAACTCCGCCTCCTC...TCTTAGGAAGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp CAAAAAGAAAGAATGTTTGGGCAAGACTCAGACTCTCTCAGAGCCAGACACACTCCCGGAGTCCACCGATaGCTGCTTGCGAGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: QKERMFGQDSDSLRARHTPGVHR*LLASCL
Trigger: AAGACAACTCGCAAGCAGGCATCGGTGGACTCCGGG...AGTGTGTCTGGCTCTGAGAGAGTCTGAGTCTTGCCCAAACATTCTTTCTTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp CCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGGCCACTCCTATTTTCAATTATaGAGGGGAAATCAGGAGCTT +
Preference number: 4 (lower is better)
Translates to: PDPYLPPRPTLLHDAKGHSYFQL*RGNQEL
Trigger: AAGCTCCTGATTTCCCCTGCATAATTGAAAATAGGA...GTGGCCTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CACACCACCGGCTGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGGTTCATCCGCTCCTCTaGCATCATAGTTATAAAAAG +
Preference number: 4 (lower is better)
Translates to: HTTGWNKEGLDTTSHDSEVHPLL*HHSYKK
Trigger: CTTTTTATAACTATGATGCCAGAGGAGCGGATGAAC...CTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCAGCCGGTGGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp AGCCTCTCCTACTTGGCTGAGCTCAGAGCAATTGAGCTCTTTGCAAATGCAAGTCTCCGTCTCGCAGGGTaGTACCATCGTATCTCATCA +
Preference number: 4 (lower is better)
Translates to: SLSYLAELRAIELFANASLRLAG*YHRISS
Trigger: TGATGAGATACGATGGTACCACCCTGCGAGACGGAG...ACTTGCATTTGCAAAGAGCTCAATTGCTCTGAGCTCAGCCAAGTAGGAGAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CAAAAAGAAAGAATGTTTGGGCAAGACTCAGACTCTCTCAGAGCCAGACACACTGCATGCTCTTGCCGGTaGCCGAGTGGCCCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: QKERMFGQDSDSLRARHTACSCR*PSGPFL
Trigger: AAGAAAAGGGCCACTCGGCCACCGGCAAGAGCATGC...AGTGTGTCTGGCTCTGAGAGAGTCTGAGTCTTGCCCAAACATTCTTTCTTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp AGCCTCTCCTACTTGGCTGAGCTCAGAGCAATTGAGCTCTTTGCAAATGCAAGTTCTGAGTCAGTTTGGTaGAGCACACGAGCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: SLSYLAELRAIELFANASSESVW*STRAWR
Trigger: TCTCCACGCTCGTGTGCTCCACCAAACTGACTCAGA...ACTTGCATTTGCAAAGAGCTCAATTGCTCTGAGCTCAGCCAAGTAGGAGAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp AACTCCTTTGAAGAAAAAGCAGTCGCACGAAATGTTAACATCACAGGCCCAATGGACGTGCCTCTGGGTTaGCCCCACGTCCTTCCTGTA +
Preference number: 4 (lower is better)
Translates to: NSFEEKAVARNVNITGPMDVPLG*PHVLPV
Trigger: TACAGGAAGGACGTGGGGCCAACCCAGAGGCACGTC...CATTGGGCCTGTGATGTTAACATTTCGTGCGACTGCTTTTTCTTCAAAGGAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp AACTCTGATAACTACGATAGCACATCCCGGACCCATATCTACCTCCCAGACCCAGTGACTTTGTCTCCATaGATTCTGATCCCTTCGGCC +
Preference number: 4 (lower is better)
Translates to: NSDNYDSTSRTHIYLPDPVTLSP*ILIPSA
Trigger: GGCCGAAGGGATCAGAATCCATGGAGACAAAGTCAC...TGGGTCTGGGAGGTAGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAAACCCGTCGGAGCCTaGTCTGGAAGGGGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: LDTTSHDSEEDSYTSSLHKPVGA*SGRGAV
Trigger: GACAGCACCCCTTCCAGACCAGGCTCCGACGGGTTT...GTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp TCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTTCCTAAGATGGCTCTTCGGTCTCTaGGGCCGCAGGGGACTTATC +
Preference number: 4 (lower is better)
Translates to: SHDSEEDSYTSSLHSFLRWLFGL*GRRGLI
Trigger: GATAAGTCCCCTGCGGCCCCAGAGACCGAAGAGCCA...TCTTAGGAAGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CAAAAAGAAAGAATGTTTGGGCAAGACTCAGACTCTCTCAGAGCCAGACACACTGGCCCTTGGTGTAACTaGAGGGGGTGTTTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: QKERMFGQDSDSLRARHTGPWCN*RGCLLG
Trigger: TCCCAGCAAACACCCCCTCCAGTTACACCAAGGGCC...AGTGTGTCTGGCTCTGAGAGAGTCTGAGTCTTGCCCAAACATTCTTTCTTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CAAAAAGAAAGAATGTTTGGGCAAGACTCAGACTCTCTCAGAGCCAGACACACTAGTCACACCACCGGCTaGAACAAGGAGGGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: QKERMFGQDSDSLRARHTSHTTG*NKEGLD
Trigger: ATCCAGCCCCTCCTTGTTCCAGCCGGTGGTGTGACT...AGTGTGTCTGGCTCTGAGAGAGTCTGAGTCTTGCCCAAACATTCTTTCTTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp ACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTTCTCCCCTGCCACCGGCTaGAAGGGAATGAAATGCTGC +
Preference number: 4 (lower is better)
Translates to: TTSHDSEEDSYTSSLHSFSPATG*KGMKCC
Trigger: GCAGCATTTCATTCCCTTTCAGCCGGTGGCAGGGGA...GAAGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280333.9
CDS-3UTR TCA 90 bp ACACACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATAACTCTTTTCGGATCTaGTGGATATCTCCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: THSEAPNSDNYDSTSRTHNSFRI*WISPGS
Trigger: ACTTCCTGGAGATATCCATCAGATCCGAAAAGAGTT...ATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp TGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATTTTGCACCATGTTCATaGTCACCCAGTCGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: WNKEGLDTTSHDSEEDSYFAPCS*SPSRRG
Trigger: ACCCCTTCGACTGGGTGATCATGAACATGGTGCAAA...ATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp AGCCTCTCCTACTTGGCTGAGCTCAGAGCAATTGAGCTCTTTGCAAATGCAAGTAGTTGCAGGGACTCTTaGGTAAGGAAAGCAACAGCC +
Preference number: 4 (lower is better)
Translates to: SLSYLAELRAIELFANASSCRDS*VRKATA
Trigger: GGCTGTTGCTTTCCTTACTCAAGAGTCCCTGCAACT...ACTTGCATTTGCAAAGAGCTCAATTGCTCTGAGCTCAGCCAAGTAGGAGAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp TGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATTGTCTCCATGGATTCTaGTCCCTTCGGCCAGAAAAG +
Preference number: 4 (lower is better)
Translates to: WNKEGLDTTSHDSEEDSYCLHGF*SLRPEK
Trigger: CTTTTCTGGCCGAAGGGATCAGAATCCATGGAGACA...ATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp TGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATTCGACTTTCATCAGCTaGCTCAAGTTCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: WNKEGLDTTSHDSEEDSYSTFIS*LKFCCS
Trigger: GCTGCAGCAGAACTTGAGGCAGCTGATGAAAGTCGA...ATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp TCAATTATGCAGGGGAAATCAGGAGCTTCCCTGGAGGGGTTGAACTTCATGGTCATGGCTTTGTACAGCTaGTCATTTACTCCCGGCTTC +
Preference number: 4 (lower is better)
Translates to: SIMQGKSGASLEGLNFMVMALYS*SFTPGF
Trigger: GAAGCCGGGAGTAAATGAGCAGCTGTACAAAGCCAT...GACCATGAAGTTCAACCCCTCCAGGGAAGCTCCTGATTTCCCCTGCATAATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp TCAATTATGCAGGGGAAATCAGGAGCTTCCCTGGAGGGGTTGAACTTCATGGTCATGGACCTGAAGAGCTaGAGCAAAGATTCCACGAAG +
Preference number: 4 (lower is better)
Translates to: SIMQGKSGASLEGLNFMVMDLKS*SKDSTK
Trigger: CTTCGTGGAATCTTTGCTGCAGCTCTTCAGGTCCAT...GACCATGAAGTTCAACCCCTCCAGGGAAGCTCCTGATTTCCCCTGCATAATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp AACTCTGATAACTACGATAGCACATCCCGGACCCATATCTACCTCCCAGACCCAACTGTTCGTCTCCTCTaGCTCCTTCGACTTCATGAT +
Preference number: 4 (lower is better)
Translates to: NSDNYDSTSRTHIYLPDPTVRLL*LLRLHD
Trigger: ATCATGAAGTCGAAGGAGGCAGAGGAGACGAACAGT...TGGGTCTGGGAGGTAGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp ACACACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATCCACTTAAGAAGCTTTaGATGGAGAAGCAAGGTGTA +
Preference number: 4 (lower is better)
Translates to: THSEAPNSDNYDSTSRTHPLKKL*MEKQGV
Trigger: TACACCTTGCTTCTCCATGCAAAGCTTCTTAAGTGG...ATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp AACTCCTTTGAAGAAAAAGCAGTCGCACGAAATGTTAACATCACAGGCCCAATGGCCTCAGGGTGCTCCTaGAGGTACCGGTCTGTAAAG +
Preference number: 4 (lower is better)
Translates to: NSFEEKAVARNVNITGPMASGCS*RYRSVK
Trigger: CTTTACAGACCGGTACCTGCAGGAGCACCCTGAGGC...CATTGGGCCTGTGATGTTAACATTTCGTGCGACTGCTTTTTCTTCAAAGGAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp CTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACCCACCGATGCCTGCTTaGGAGTTGTCTTTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: LDTTSHDSEEDSYTSSLHPPMPA*ELSLEG
Trigger: CCCCTCCAAAGACAACTCGCAAGCAGGCATCGGTGG...GTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp TCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTTCCTAAGACTCCCAGACCCACCTTaGTCCATGACGCTAAAGGCC +
Preference number: 4 (lower is better)
Translates to: SHDSEEDSYTSSLHSFLRLPDPP*SMTLKA
Trigger: GGCCTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAG...TCTTAGGAAGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp TCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTTCCTAAGAAGAGCTGCCTCCAGATaGTGGACCACTCTCGGAGTG +
Preference number: 4 (lower is better)
Translates to: SHDSEEDSYTSSLHSFLRRAASR*WTTLGV
Trigger: CACTCCGAGAGTGGTCCACCATCTGGAGGCAGCTCT...TCTTAGGAAGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CAAAAAGAAAGAATGTTTGGGCAAGACTCAGACTCTCTCAGAGCCAGACACACTTCTGCTGCAGCAGGCTaGTGTTGGAGCGCCATTTCA +
Preference number: 4 (lower is better)
Translates to: QKERMFGQDSDSLRARHTSAAAG*CWSAIS
Trigger: TGAAATGGCGCTCCAACACCAGCCTGCTGCAGCAGA...AGTGTGTCTGGCTCTGAGAGAGTCTGAGTCTTGCCCAAACATTCTTTCTTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp ACACACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATATTCTAGCGCTTTCATaGCTTTGTACAGCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: THSEAPNSDNYDSTSRTHILALS*LCTAAH
Trigger: ATGAGCAGCTGTACAAAGCCATGAAAGCGCTAGAAT...ATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CAAAAAGAAAGAATGTTTGGGCAAGACTCAGACTCTCTCAGAGCCAGACACACTAGAAGATGGGGATGGTaGCTTTGCGCAGCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: QKERMFGQDSDSLRARHTRRWGW*LCAAPS
Trigger: AGACGGAGCTGCGCAAAGCCACCATCCCCATCTTCT...AGTGTGTCTGGCTCTGAGAGAGTCTGAGTCTTGCCCAAACATTCTTTCTTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp ATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTTGGCTCTTCGGTCTCTaGGGCCGCAGGGGACTTATC +
Preference number: 4 (lower is better)
Translates to: IQHPMTVRRILIHHHYTAWLFGL*GRRGLI
Trigger: GATAAGTCCCCTGCGGCCCCAGAGACCGAAGAGCCA...AGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACGAGGCGGAGTTTTGCTaGGCAGTGGAGGTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: LDTTSHDSEEDSYTSSLHEAEFC*AVEVAD
Trigger: ATCTGCCACCTCCACTGCCCAGCAAAACTCCGCCTC...GTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
3UTR CAA 72 bp GGCCTAGCCTCTCCTACTTGGCTGAGCTCAGAGCAATaGAGCTCTTTGCAAATGCAAGTCATTTGGCACAAA +
Preference number: 4 (lower is better)
Translates to: GLASPTWLSSEQ*SSLQMQVIWHK
Trigger: TTTGTGCCAAATGACTTGCATTTGCAAAGAGCTCAATTGCTCTGAGCTCAGCCAAGTAGGAGAGGCTAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp TCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTTCCTAAGAGGAGGTCACCCGGGATaGCTGTTTCATGTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: SHDSEEDSYTSSLHSFLRGGHPG*LFHVAL
Trigger: AAGGGCAACATGAAACAGTCATCCCGGGTGACCTCC...TCTTAGGAAGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp AACTCTGATAACTACGATAGCACATCCCGGACCCATATCTACCTCCCAGACCCACCCACGCGAACAATCTaGCAGACAAAACTGATTTTC +
Preference number: 4 (lower is better)
Translates to: NSDNYDSTSRTHIYLPDPPTRTI*QTKLIF
Trigger: GAAAATCAGTTTTGTCTGTCAGATTGTTCGCGTGGG...TGGGTCTGGGAGGTAGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp CCAACTCTGATAACTACGATAGCACATCCCGGACCCATATCTACCTCCCAGACCAACTCTTTTCGGATCTaGTGGATATCTCCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: PTLITTIAHPGPISTSQTNSFRI*WISPGS
Trigger: ACTTCCTGGAGATATCCATCAGATCCGAAAAGAGTT...GGTCTGGGAGGTAGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp ATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTCGTACACAGACACCGTaGCCTCCACGTTCTTCGCTG +
Preference number: 4 (lower is better)
Translates to: IQHPMTVRRILIHHHYTARTQTP*PPRSSL
Trigger: CAGCGAAGAACGTGGAGGTCACGGTGTCTGTGTACG...AGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp TCAATTATGCAGGGGAAATCAGGAGCTTCCCTGGAGGGGTTGAACTTCATGGTCCACAGATTTGTACTCTaGAATCGCTTCATCACCAGC +
Preference number: 4 (lower is better)
Translates to: SIMQGKSGASLEGLNFMVHRFVL*NRFITS
Trigger: GCTGGTGATGAAGCGATTTCAGAGTACAAATCTGTG...GACCATGAAGTTCAACCCCTCCAGGGAAGCTCCTGATTTCCCCTGCATAATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp AACTCTGATAACTACGATAGCACATCCCGGACCCATATCTACCTCCCAGACCCATTTCATACAGTTGATTaGACAGGATCCTGGAGCGCA +
Preference number: 4 (lower is better)
Translates to: NSDNYDSTSRTHIYLPDPFHTVD*TGSWSA
Trigger: TGCGCTCCAGGATCCTGTTCAATCAACTGTATGAAA...TGGGTCTGGGAGGTAGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp TGGTCTGATGTAGGTTGGAGACACACCTCAACCAACGAAGTCACACCACCGGCTTATGTTTCTAAGATGTaGACAGTGTCTCCGATCTGT +
Preference number: 4 (lower is better)
Translates to: WSDVGWRHTSTNEVTPPAYVSKM*TVSPIC
Trigger: ACAGATCGGAGACACTGTGCACATCTTAGAAACATA...AGCCGGTGGTGTGACTTCGTTGGTTGAGGTGTGTCTCCAACCTACATCAGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp CATATGGATAATCATTGGTGGACGCCTATTATAATAAACGGAAGGACCACAAAACAGCTCCCAAGGCTCTaGATGCTCTTGCCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: HMDNHWWTPIIINGRTTKQLPRL*MLLPVA
Trigger: GGCCACCGGCAAGAGCATGCAGAGCCTTGGGAGCTG...TTTTGTGGTCCTTCCGTTTATTATAATAGGCGTCCACCAATGATTATCCATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp AACTCCTTTGAAGAAAAAGCAGTCGCACGAAATGTTAACATCACAGGCCCAATGTGCCTCAAGTTCTGCTaGAGCAGGCTGGTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: NSFEEKAVARNVNITGPMCLKFC*SRLVLE
Trigger: CTCCAACACCAGCCTGCTGCAGCAGAACTTGAGGCA...CATTGGGCCTGTGATGTTAACATTTCGTGCGACTGCTTTTTCTTCAAAGGAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp TGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATATCTCTCTGCAGTCATaGTGTGTGAAGAGGTCACTG +
Preference number: 4 (lower is better)
Translates to: WNKEGLDTTSHDSEEDSYISLQS*CVKRSL
Trigger: CAGTGACCTCTTCACACAGCATGACTGCAGAGAGAT...ATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp ACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTTCCTTTCCAGAGAGGCTTaGGACGTCACTGCACGATCC +
Preference number: 4 (lower is better)
Translates to: TTSHDSEEDSYTSSLHSFLSREA*DVTARS
Trigger: GGATCGTGCAGTGACGTCGCAAGCCTCTCTGGAAAG...GAAGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACTGGAGCACACGAGCGTaGAGATCTGGAAGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: LDTTSHDSEEDSYTSSLHWSTRA*RSGRSP
Trigger: AGGACTCCTTCCAGATCTCCACGCTCGTGTGCTCCA...GTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp ACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATATCTAAGTTTCTCCTGTTTTaGCGAGGTATTTGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: TQRPPTLITTIAHPGPISKFLLF*RGICAS
Trigger: GGAAGCACAAATACCTCGCCAAAACAGGAGAAACTT...AGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACTTCCCCGCAGGAATGTaGGGAACCCTTGTCCGTAGT +
Preference number: 4 (lower is better)
Translates to: LDTTSHDSEEDSYTSSLHFPAGM*GTLVRS
Trigger: ACTACGGACAAGGGTTCCCCACATTCCTGCGGGGAA...GTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACGGAGTGCATTTTCTTTaGCAGGAGAGGCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: LDTTSHDSEEDSYTSSLHGVHFL*QERLQG
Trigger: GCCCTGGAGCCTCTCCTGCCAAAGAAAATGCACTCC...GTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACATGACGTTCATCACCTaGCTCTTCGGTCTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LDTTSHDSEEDSYTSSLHMTFIT*LFGLWG
Trigger: GCCCCAGAGACCGAAGAGCCAGGTGATGAACGTCAT...GTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CATATGGATAATCATTGGTGGACGCCTATTATAATAAACGGAAGGACCACAAAAGCGGCTTGTGTCGAATaGCGTCGTCCAACGCGAGCG +
Preference number: 4 (lower is better)
Translates to: HMDNHWWTPIIINGRTTKAACVE*RRPTRA
Trigger: CGCTCGCGTTGGACGACGCCATTCGACACAAGCCGC...TTTTGTGGTCCTTCCGTTTATTATAATAGGCGTCCACCAATGATTATCCATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623213.2
CDS-3UTR TCA 90 bp CCAACTCTGATAACTACGATAGCACATCCCGGACCCATATCTACCTCCCAGACCTACAAACCACATTTTTaGGGTTCACAAACAAGGCCA +
Preference number: 4 (lower is better)
Translates to: PTLITTIAHPGPISTSQTYKPHF*GSQTRP
Trigger: TGGCCTTGTTTGTGAACCTCAAAAATGTGGTTTGTA...GGTCTGGGAGGTAGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp TGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATTTTCATACAGTTGATTaGACAGGATCCTGGAGCGCA +
Preference number: 4 (lower is better)
Translates to: WNKEGLDTTSHDSEEDSYFHTVD*TGSWSA
Trigger: TGCGCTCCAGGATCCTGTTCAATCAACTGTATGAAA...ATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp CCAACTCTGATAACTACGATAGCACATCCCGGACCCATATCTACCTCCCAGACCTTGTTTTCATACAGTTaGTTGAACAGGATCCTGGAG +
Preference number: 4 (lower is better)
Translates to: PTLITTIAHPGPISTSQTLFSYS*LNRILE
Trigger: CTCCAGGATCCTGTTCAATCAACTGTATGAAAACAA...GGTCTGGGAGGTAGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp TCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTTCCTAAGATCTGACACTGGCCTGTaGAACTTAGGAGGCAGATCG +
Preference number: 4 (lower is better)
Translates to: SHDSEEDSYTSSLHSFLRSDTGL*NLGGRS
Trigger: CGATCTGCCTCCTAAGTTTCACAGGCCAGTGTCAGA...TCTTAGGAAGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp AGCCTCTCCTACTTGGCTGAGCTCAGAGCAATTGAGCTCTTTGCAAATGCAAGTTTGAACTTCATGGTCTaGTGTAGGTTGGAGACACAC +
Preference number: 4 (lower is better)
Translates to: SLSYLAELRAIELFANASLNFMV*CRLETH
Trigger: GTGTGTCTCCAACCTACATCAGACCATGAAGTTCAA...ACTTGCATTTGCAAAGAGCTCAATTGCTCTGAGCTCAGCCAAGTAGGAGAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp CCAACTCTGATAACTACGATAGCACATCCCGGACCCATATCTACCTCCCAGACCTATGTTTCTAAGATGTaGACAGTGTCTCCGATCTGT +
Preference number: 4 (lower is better)
Translates to: PTLITTIAHPGPISTSQTYVSKM*TVSPIC
Trigger: ACAGATCGGAGACACTGTGCACATCTTAGAAACATA...GGTCTGGGAGGTAGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp AGCCTCTCCTACTTGGCTGAGCTCAGAGCAATTGAGCTCTTTGCAAATGCAAGTTTATCACACTCCTTGTaGAGGTCACAGAGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: SLSYLAELRAIELFANASLSHSL*RSQSLY
Trigger: GTACAAGCTCTGTGACCTGCACAAGGAGTGTGATAA...ACTTGCATTTGCAAAGAGCTCAATTGCTCTGAGCTCAGCCAAGTAGGAGAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp ATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTCTTTCCAGAGAGGCTTaGGACGTCACTGCACGATCC +
Preference number: 4 (lower is better)
Translates to: IQHPMTVRRILIHHHYTALSREA*DVTARS
Trigger: GGATCGTGCAGTGACGTCGCAAGCCTCTCTGGAAAG...AGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp TCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTTCCTAAGATTCGAGCCACAGCTGTaGTCCTGTCCACTAAATGCG +
Preference number: 4 (lower is better)
Translates to: SHDSEEDSYTSSLHSFLRFEPQL*SCPLNA
Trigger: CGCATTTAGTGGACAGGACCACAGCTGTGGCTCGAA...TCTTAGGAAGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp ATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTCCAACTCTGCCTTCGTaGAGGGCAGACTCAAGTACG +
Preference number: 4 (lower is better)
Translates to: IQHPMTVRRILIHHHYTAPTLPS*RADSST
Trigger: CGTACTTGAGTCTGCCCTCCACGAAGGCAGAGTTGG...AGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CAAAAAGAAAGAATGTTTGGGCAAGACTCAGACTCTCTCAGAGCCAGACACACTACGAGCGTGGAGATCTaGAAGGAGTCCTTGCTAATG +
Preference number: 4 (lower is better)
Translates to: QKERMFGQDSDSLRARHTTSVEI*KESLLM
Trigger: CATTAGCAAGGACTCCTTCCAGATCTCCACGCTCGT...AGTGTGTCTGGCTCTGAGAGAGTCTGAGTCTTGCCCAAACATTCTTTCTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp ATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTTCTGCTGCAGCAGGCTaGTGTTGGAGCGCCATTTCA +
Preference number: 4 (lower is better)
Translates to: IQHPMTVRRILIHHHYTASAAAG*CWSAIS
Trigger: TGAAATGGCGCTCCAACACCAGCCTGCTGCAGCAGA...AGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp ACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATATCTGGATTTTGGCTCTCTTaGCACTTGAAAAATTCTCCA +
Preference number: 4 (lower is better)
Translates to: TQRPPTLITTIAHPGPISGFWLS*HLKNSP
Trigger: TGGAGAATTTTTCAAGTGCCAAGAGAGCCAAAATCC...AGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CAAAAAGAAAGAATGTTTGGGCAAGACTCAGACTCTCTCAGAGCCAGACACACTGGAACAAGGAGGGGCTaGATACAACATCCCATGACA +
Preference number: 4 (lower is better)
Translates to: QKERMFGQDSDSLRARHTGTRRG*IQHPMT
Trigger: TGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCC...AGTGTGTCTGGCTCTGAGAGAGTCTGAGTCTTGCCCAAACATTCTTTCTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp TCAATTATGCAGGGGAAATCAGGAGCTTCCCTGGAGGGGTTGAACTTCATGGTCTCCAGAAAGAATTTGTaGTCGCCATTCAATAAGGTC +
Preference number: 4 (lower is better)
Translates to: SIMQGKSGASLEGLNFMVSRKNL*SPFNKV
Trigger: GACCTTATTGAATGGCGATCACAAATTCTTTCTGGA...GACCATGAAGTTCAACCCCTCCAGGGAAGCTCCTGATTTCCCCTGCATAATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp AACTCTGATAACTACGATAGCACATCCCGGACCCATATCTACCTCCCAGACCCACCAATTTCACATCGTTaGCGATCGTTGGTAAGTATT +
Preference number: 4 (lower is better)
Translates to: NSDNYDSTSRTHIYLPDPPISHR*RSLVSI
Trigger: AATACTTACCAACGATCGTCAACGATGTGAAATTGG...TGGGTCTGGGAGGTAGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp AACTCTGATAACTACGATAGCACATCCCGGACCCATATCTACCTCCCAGACCCATTTTCCCAAAAGTCTTaGTCAAGTGGGCATAATGGT +
Preference number: 4 (lower is better)
Translates to: NSDNYDSTSRTHIYLPDPFSQKS*SSGHNG
Trigger: ACCATTATGCCCACTTGATCAAGACTTTTGGGAAAA...TGGGTCTGGGAGGTAGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp AACTCCTTTGAAGAAAAAGCAGTCGCACGAAATGTTAACATCACAGGCCCAATGTTTGCACCATGTTCATaGTCACCCAGTCGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: NSFEEKAVARNVNITGPMFAPCS*SPSRRG
Trigger: ACCCCTTCGACTGGGTGATCATGAACATGGTGCAAA...CATTGGGCCTGTGATGTTAACATTTCGTGCGACTGCTTTTTCTTCAAAGGAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp CAAAAAGAAAGAATGTTTGGGCAAGACTCAGACTCTCTCAGAGCCAGACACACTGTTTGGGCTTCACTGTaGAGCACTGAATATACTGGC +
Preference number: 4 (lower is better)
Translates to: QKERMFGQDSDSLRARHTVWASL*STEYTG
Trigger: GCCAGTATATTCAGTGCTTCACAGTGAAGCCCAAAC...AGTGTGTCTGGCTCTGAGAGAGTCTGAGTCTTGCCCAAACATTCTTTCTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp CTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACTGTCTCCATGGATTCTaGTCCCTTCGGCCAGAAAAG +
Preference number: 4 (lower is better)
Translates to: LDTTSHDSEEDSYTSSLHCLHGF*SLRPEK
Trigger: CTTTTCTGGCCGAAGGGATCAGAATCCATGGAGACA...GTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp CATTGGTGGACGCCTATTATAATAAACGGAAGGACCACAAAAATTAAAACAAGTAGGGGTGCTGTCCGATaGGAGGGAAGAGACAGAGGC +
Preference number: 4 (lower is better)
Translates to: HWWTPIIINGRTTKIKTSRGAVR*EGRDRG
Trigger: GCCTCTGTCTCTTCCCTCTCATCGGACAGCACCCCT...ACTTGTTTTAATTTTTGTGGTCCTTCCGTTTATTATAATAGGCGTCCACCAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp TCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTTCCTAAGAACATCACAGGCCCAATaGGGTAAACAGCAGACTCAG +
Preference number: 4 (lower is better)
Translates to: SHDSEEDSYTSSLHSFLRTSQAQ*GKQQTQ
Trigger: CTGAGTCTGCTGTTTACCTCATTGGGCCTGTGATGT...TCTTAGGAAGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp CAAAAAGAAAGAATGTTTGGGCAAGACTCAGACTCTCTCAGAGCCAGACACACTCCCGGGAAAATCACATaGTCTAATCGTTTCCCATCC +
Preference number: 4 (lower is better)
Translates to: QKERMFGQDSDSLRARHTPGKIT*SNRFPS
Trigger: GGATGGGAAACGATTAGAGCATGTGATTTTCCCGGG...AGTGTGTCTGGCTCTGAGAGAGTCTGAGTCTTGCCCAAACATTCTTTCTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp AACTCCTTTGAAGAAAAAGCAGTCGCACGAAATGTTAACATCACAGGCCCAATGATTTCGTTCTCATACTaGTCGGCTAGCTCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: NSFEEKAVARNVNITGPMISFSY*SASSLP
Trigger: GGGCAAGGAGCTAGCCGAGCAGTATGAGAACGAAAT...CATTGGGCCTGTGATGTTAACATTTCGTGCGACTGCTTTTTCTTCAAAGGAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp AACTCCTTTGAAGAAAAAGCAGTCGCACGAAATGTTAACATCACAGGCCCAATGTCATCCAGGTGCTGCTaGACCATGCTGTTGATCTTG +
Preference number: 4 (lower is better)
Translates to: NSFEEKAVARNVNITGPMSSRCC*TMLLIL
Trigger: CAAGATCAACAGCATGGTGCAGCAGCACCTGGATGA...CATTGGGCCTGTGATGTTAACATTTCGTGCGACTGCTTTTTCTTCAAAGGAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp CTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACTCATCCAGGTGCTGCTaGACCATGCTGTTGATCTTG +
Preference number: 4 (lower is better)
Translates to: LDTTSHDSEEDSYTSSLHSSRCC*TMLLIL
Trigger: CAAGATCAACAGCATGGTGCAGCAGCACCTGGATGA...GTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp CAAAAAGAAAGAATGTTTGGGCAAGACTCAGACTCTCTCAGAGCCAGACACACTGCCAGAAAAGGAATCTaGCAAGCAATCAGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: QKERMFGQDSDSLRARHTARKGI*QAIRSL
Trigger: CAAGGACCTGATTGCTTGGCAGATTCCTTTTCTGGC...AGTGTGTCTGGCTCTGAGAGAGTCTGAGTCTTGCCCAAACATTCTTTCTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp ATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTGAGTCCACCGATGCCTaGTTGCGAGTTGTCTTTGGA +
Preference number: 4 (lower is better)
Translates to: IQHPMTVRRILIHHHYTAESTDA*LRVVFG
Trigger: TCCAAAGACAACTCGCAAGCAGGCATCGGTGGACTC...AGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CATTGGTGGACGCCTATTATAATAAACGGAAGGACCACAAAAATTAAAACAAGTGTCGTGGTGACTTCCTaGATGAGGGGGAGGTCACCC +
Preference number: 4 (lower is better)
Translates to: HWWTPIIINGRTTKIKTSVVVTS*MRGRSP
Trigger: GGGTGACCTCCCCCTCATCCAGGAAGTCACCACGAC...ACTTGTTTTAATTTTTGTGGTCCTTCCGTTTATTATAATAGGCGTCCACCAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACGCAGACTCAAGTACGTaGCAGCATCTTCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: LDTTSHDSEEDSYTSSLHADSST*QHLPAS
Trigger: AGAAGCTGGAAGATGCTGCCACGTACTTGAGTCTGC...GTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CATATGGATAATCATTGGTGGACGCCTATTATAATAAACGGAAGGACCACAAAAGCAGCAGGCTGGTGTTaGAGCGCCATTTCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: HMDNHWWTPIIINGRTTKAAGWC*SAISRA
Trigger: GGCTCTTGAAATGGCGCTCCAACACCAGCCTGCTGC...TTTTGTGGTCCTTCCGTTTATTATAATAGGCGTCCACCAATGATTATCCATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp ACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTTCGCTTGTCCTGGGACCTaGAGTGCATTTTCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: TTSHDSEEDSYTSSLHSFACPGT*SAFSLA
Trigger: TGCCAAAGAAAATGCACTCCAGGTCCCAGGACAAGC...GAAGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACCTAGCCTCTCCTACTTaGCTGAGCTCAGAGCAATTG +
Preference number: 4 (lower is better)
Translates to: LDTTSHDSEEDSYTSSLHLASPT*LSSEQL
Trigger: CAATTGCTCTGAGCTCAGCCAAGTAGGAGAGGCTAG...GTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CAAAAAGAAAGAATGTTTGGGCAAGACTCAGACTCTCTCAGAGCCAGACACACTTGGTCTGATGTAGGTTaGAGACACACCTCAACCAAC +
Preference number: 4 (lower is better)
Translates to: QKERMFGQDSDSLRARHTWSDVG*RHTSTN
Trigger: GTTGGTTGAGGTGTGTCTCCAACCTACATCAGACCA...AGTGTGTCTGGCTCTGAGAGAGTCTGAGTCTTGCCCAAACATTCTTTCTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp CAAAAAGAAAGAATGTTTGGGCAAGACTCAGACTCTCTCAGAGCCAGACACACTGCATCCAACGTGTCCTaGAGAAACTTCACTACTTCA +
Preference number: 4 (lower is better)
Translates to: QKERMFGQDSDSLRARHTASNVS*RNFTTS
Trigger: TGAAGTAGTGAAGTTTCTTCAGGACACGTTGGATGC...AGTGTGTCTGGCTCTGAGAGAGTCTGAGTCTTGCCCAAACATTCTTTCTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp AACTCCTTTGAAGAAAAAGCAGTCGCACGAAATGTTAACATCACAGGCCCAATGCCACGAAGTTTCCAATaGGTTCAGAATCTCGTCCCA +
Preference number: 4 (lower is better)
Translates to: NSFEEKAVARNVNITGPMPRSFQ*VQNLVP
Trigger: TGGGACGAGATTCTGAACTCATTGGAAACTTCGTGG...CATTGGGCCTGTGATGTTAACATTTCGTGCGACTGCTTTTTCTTCAAAGGAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp ATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTCCTCCTTCGACTTCATaGTCCAGCTTGGTGATGATC +
Preference number: 4 (lower is better)
Translates to: IQHPMTVRRILIHHHYTAPPSTS*SSLVMI
Trigger: GATCATCACCAAGCTGGATCATGAAGTCGAAGGAGG...AGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp AACTCCTTTGAAGAAAAAGCAGTCGCACGAAATGTTAACATCACAGGCCCAATGTGTCGAAGTAGTGGATaGTTTCCTGGTAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: NSFEEKAVARNVNITGPMCRSSG*FPGRAA
Trigger: AGCAGCTCTACCAGGAAATCATCCACTACTTCGACA...CATTGGGCCTGTGATGTTAACATTTCGTGCGACTGCTTTTTCTTCAAAGGAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp AACTCCTTTGAAGAAAAAGCAGTCGCACGAAATGTTAACATCACAGGCCCAATGCTTTCCCTCGGTAAATaGAAACTTTTCCCCGCAGGA +
Preference number: 4 (lower is better)
Translates to: NSFEEKAVARNVNITGPMLSLGK*KLFPAG
Trigger: TCCTGCGGGGAAAAGTTTTCATTTACCGAGGGAAAG...CATTGGGCCTGTGATGTTAACATTTCGTGCGACTGCTTTTTCTTCAAAGGAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp ACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATATCTTCTTCGCTGTTGTTTTaGTTCCTTTATCAAAATCTC +
Preference number: 4 (lower is better)
Translates to: TQRPPTLITTIAHPGPISSSLLF*FLYQNL
Trigger: GAGATTTTGATAAAGGAAGCAAAACAACAGCGAAGA...AGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp TCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTTCCTAAGAGCCAGAAAAGGAATCTaGCAAGCAATCAGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: SHDSEEDSYTSSLHSFLRARKGI*QAIRSL
Trigger: CAAGGACCTGATTGCTTGGCAGATTCCTTTTCTGGC...TCTTAGGAAGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CATATGGATAATCATTGGTGGACGCCTATTATAATAAACGGAAGGACCACAAAACCAACTCTGCCTTCGTaGAGGGCAGACTCAAGTACG +
Preference number: 4 (lower is better)
Translates to: HMDNHWWTPIIINGRTTKPTLPS*RADSST
Trigger: CGTACTTGAGTCTGCCCTCCACGAAGGCAGAGTTGG...TTTTGTGGTCCTTCCGTTTATTATAATAGGCGTCCACCAATGATTATCCATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CATATGGATAATCATTGGTGGACGCCTATTATAATAAACGGAAGGACCACAAAATTCACCCGGACGGTCTaGTCTGACATGCTGCTCATC +
Preference number: 4 (lower is better)
Translates to: HMDNHWWTPIIINGRTTKFTRTV*SDMLLI
Trigger: GATGAGCAGCATGTCAGACCAGACCGTCCGGGTGAA...TTTTGTGGTCCTTCCGTTTATTATAATAGGCGTCCACCAATGATTATCCATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGTAGAGTTTCTGGATaGTCAGCAAGCCCATGGGAA +
Preference number: 4 (lower is better)
Translates to: LDTTSHDSEEDSYTSSLHSRVSG*SASPWE
Trigger: TTCCCATGGGCTTGCTGACCATCCAGAAACTCTACT...GTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp AGCCTCTCCTACTTGGCTGAGCTCAGAGCAATTGAGCTCTTTGCAAATGCAAGTGGATTTTGGCTCTCTTaGCACTTGAAAAATTCTCCA +
Preference number: 4 (lower is better)
Translates to: SLSYLAELRAIELFANASGFWLS*HLKNSP
Trigger: TGGAGAATTTTTCAAGTGCCAAGAGAGCCAAAATCC...ACTTGCATTTGCAAAGAGCTCAATTGCTCTGAGCTCAGCCAAGTAGGAGAGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp TGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATTCATTTTCAAACATTTaGAAGCTTCGGGTCGAATGG +
Preference number: 4 (lower is better)
Translates to: WNKEGLDTTSHDSEEDSYSFSNI*KLRVEW
Trigger: CCATTCGACCCGAAGCTTCCAAATGTTTGAAAATGA...ATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp AGCCTCTCCTACTTGGCTGAGCTCAGAGCAATTGAGCTCTTTGCAAATGCAAGTAATATCGTCGCCTGGTaGAGATGTTGTCTTCATTTT +
Preference number: 4 (lower is better)
Translates to: SLSYLAELRAIELFANASNIVAW*RCCLHF
Trigger: AAAATGAAGACAACATCTCCACCAGGCGACGATATT...ACTTGCATTTGCAAAGAGCTCAATTGCTCTGAGCTCAGCCAAGTAGGAGAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp AGCCTCTCCTACTTGGCTGAGCTCAGAGCAATTGAGCTCTTTGCAAATGCAAGTTTTAATATCGTCGCCTaGTGGAGATGTTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: SLSYLAELRAIELFANASFNIVA*WRCCLH
Trigger: ATGAAGACAACATCTCCACCAGGCGACGATATTAAA...ACTTGCATTTGCAAAGAGCTCAATTGCTCTGAGCTCAGCCAAGTAGGAGAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp TGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATTTTAATATCGTCGCCTaGTGGAGATGTTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: WNKEGLDTTSHDSEEDSYFNIVA*WRCCLH
Trigger: ATGAAGACAACATCTCCACCAGGCGACGATATTAAA...ATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp ACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTTCCTCTCCCTTCCGGATTaGCCGAGAATATTCAAATCG +
Preference number: 4 (lower is better)
Translates to: TTSHDSEEDSYTSSLHSFLSLPD*PRIFKS
Trigger: CGATTTGAATATTCTCGGCCAATCCGGAAGGGAGAG...GAAGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACCTCTCCCTTCCGGATTaGCCGAGAATATTCAAATCG +
Preference number: 4 (lower is better)
Translates to: LDTTSHDSEEDSYTSSLHLSLPD*PRIFKS
Trigger: CGATTTGAATATTCTCGGCCAATCCGGAAGGGAGAG...GTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CCAACTCTGATAACTACGATAGCACATCCCGGACCCATATCTACCTCCCAGACCATGCAGTTGTATATATaGTTCTCTCGATCCACATAT +
Preference number: 4 (lower is better)
Translates to: PTLITTIAHPGPISTSQTMQLYI*FSRSTY
Trigger: ATATGTGGATCGAGAGAACCATATATACAACTGCAT...GGTCTGGGAGGTAGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACTGGTCTGATGTAGGTTaGAGACACACCTCAACCAAC +
Preference number: 4 (lower is better)
Translates to: LDTTSHDSEEDSYTSSLHWSDVG*RHTSTN
Trigger: GTTGGTTGAGGTGTGTCTCCAACCTACATCAGACCA...GTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp TGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATTTAGAAGCTATTTCATaGGCTCTGAAGAGACTAATC +
Preference number: 4 (lower is better)
Translates to: WNKEGLDTTSHDSEEDSYLEAIS*ALKRLI
Trigger: GATTAGTCTCTTCAGAGCTCATGAAATAGCTTCTAA...ATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp TCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTTCCTAAGACCCACGCGAACAATCTaGCAGACAAAACTGATTTTC +
Preference number: 4 (lower is better)
Translates to: SHDSEEDSYTSSLHSFLRPTRTI*QTKLIF
Trigger: GAAAATCAGTTTTGTCTGTCAGATTGTTCGCGTGGG...TCTTAGGAAGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp CTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACCACAGATTTGTACTCTaGAATCGCTTCATCACCAGC +
Preference number: 4 (lower is better)
Translates to: LDTTSHDSEEDSYTSSLHHRFVL*NRFITS
Trigger: GCTGGTGATGAAGCGATTTCAGAGTACAAATCTGTG...GTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp CATATGGATAATCATTGGTGGACGCCTATTATAATAAACGGAAGGACCACAAAAAGAAGGTCCACGTTCTaGGTCAGTTTGGTGGAGCAC +
Preference number: 4 (lower is better)
Translates to: HMDNHWWTPIIINGRTTKRRSTF*VSLVEH
Trigger: GTGCTCCACCAAACTGACTCAGAACGTGGACCTTCT...TTTTGTGGTCCTTCCGTTTATTATAATAGGCGTCCACCAATGATTATCCATATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp ATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTGTTTGGGCTTCACTGTaGAGCACTGAATATACTGGC +
Preference number: 4 (lower is better)
Translates to: IQHPMTVRRILIHHHYTAVWASL*STEYTG
Trigger: GCCAGTATATTCAGTGCTTCACAGTGAAGCCCAAAC...AGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp CAAAAAGAAAGAATGTTTGGGCAAGACTCAGACTCTCTCAGAGCCAGACACACTAAGCAATCAGGTCCTTaGGCTTCTCGATCTTTTCAT +
Preference number: 4 (lower is better)
Translates to: QKERMFGQDSDSLRARHTKQSGP*ASRSFH
Trigger: ATGAAAAGATCGAGAAGCTCAAGGACCTGATTGCTT...AGTGTGTCTGGCTCTGAGAGAGTCTGAGTCTTGCCCAAACATTCTTTCTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp CAAAAAGAAAGAATGTTTGGGCAAGACTCAGACTCTCTCAGAGCCAGACACACTATCTTCCAGCTTCTTTaGTTCGGCCTTATAGACGAT +
Preference number: 4 (lower is better)
Translates to: QKERMFGQDSDSLRARHTIFQLL*FGLIDD
Trigger: ATCGTCTATAAGGCCGAAGCAAAGAAGCTGGAAGAT...AGTGTGTCTGGCTCTGAGAGAGTCTGAGTCTTGCCCAAACATTCTTTCTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp CATTGGTGGACGCCTATTATAATAAACGGAAGGACCACAAAAATTAAAACAAGTAGCTGCCTCAAGTTCTaGTGCAGCAGGCTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: HWWTPIIINGRTTKIKTSSCLKF*CSRLVL
Trigger: CAACACCAGCCTGCTGCAGCAGAACTTGAGGCAGCT...ACTTGTTTTAATTTTTGTGGTCCTTCCGTTTATTATAATAGGCGTCCACCAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp AACTCCTTTGAAGAAAAAGCAGTCGCACGAAATGTTAACATCACAGGCCCAATGAGTCTCAAACCAGCGTaGCTGCTTTACTTGGTAGTA +
Preference number: 4 (lower is better)
Translates to: NSFEEKAVARNVNITGPMSLKPA*LLYLVV
Trigger: TACTACCAAGTAAAGCAGCCACGCTGGTTTGAGACT...CATTGGGCCTGTGATGTTAACATTTCGTGCGACTGCTTTTTCTTCAAAGGAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CAAAAAGAAAGAATGTTTGGGCAAGACTCAGACTCTCTCAGAGCCAGACACACTATTCTAGCGCTTTCATaGCTTTGTACAGCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: QKERMFGQDSDSLRARHTILALS*LCTAAH
Trigger: ATGAGCAGCTGTACAAAGCCATGAAAGCGCTAGAAT...AGTGTGTCTGGCTCTGAGAGAGTCTGAGTCTTGCCCAAACATTCTTTCTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp ATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTGTGAAGAGGTCACTGTaGACGATTTCGATCAAGCAG +
Preference number: 4 (lower is better)
Translates to: IQHPMTVRRILIHHHYTAVKRSL*TISIKQ
Trigger: CTGCTTGATCGAAATCGTCCACAGTGACCTCTTCAC...AGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CATTGGTGGACGCCTATTATAATAAACGGAAGGACCACAAAAATTAAAACAAGTAGAAGATGGGGATGGTaGCTTTGCGCAGCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: HWWTPIIINGRTTKIKTSRRWGW*LCAAPS
Trigger: AGACGGAGCTGCGCAAAGCCACCATCCCCATCTTCT...ACTTGTTTTAATTTTTGTGGTCCTTCCGTTTATTATAATAGGCGTCCACCAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp CAAAAAGAAAGAATGTTTGGGCAAGACTCAGACTCTCTCAGAGCCAGACACACTTTGTTTATAACAGTCTaGAGGAAGTCATTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: QKERMFGQDSDSLRARHTLFITV*RKSFSP
Trigger: AGGGGAGAATGACTTCCTTCAGACTGTTATAAACAA...AGTGTGTCTGGCTCTGAGAGAGTCTGAGTCTTGCCCAAACATTCTTTCTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp CATATGGATAATCATTGGTGGACGCCTATTATAATAAACGGAAGGACCACAAAAACATCACAGGCCCAATaGGGTAAACAGCAGACTCAG +
Preference number: 4 (lower is better)
Translates to: HMDNHWWTPIIINGRTTKTSQAQ*GKQQTQ
Trigger: CTGAGTCTGCTGTTTACCTCATTGGGCCTGTGATGT...TTTTGTGGTCCTTCCGTTTATTATAATAGGCGTCCACCAATGATTATCCATATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp CATATGGATAATCATTGGTGGACGCCTATTATAATAAACGGAAGGACCACAAAATCGACTTTCATCAGCTaGCTCAAGTTCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: HMDNHWWTPIIINGRTTKSTFIS*LKFCCS
Trigger: GCTGCAGCAGAACTTGAGGCAGCTGATGAAAGTCGA...TTTTGTGGTCCTTCCGTTTATTATAATAGGCGTCCACCAATGATTATCCATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp AACTCCTTTGAAGAAAAAGCAGTCGCACGAAATGTTAACATCACAGGCCCAATGCCACTTAAGAAGCTTTaGATGGAGAAGCAAGGTGTA +
Preference number: 4 (lower is better)
Translates to: NSFEEKAVARNVNITGPMPLKKL*MEKQGV
Trigger: TACACCTTGCTTCTCCATGCAAAGCTTCTTAAGTGG...CATTGGGCCTGTGATGTTAACATTTCGTGCGACTGCTTTTTCTTCAAAGGAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CATTGGTGGACGCCTATTATAATAAACGGAAGGACCACAAAAATTAAAACAAGTCTCCGTCTCGCAGGGTaGTACCATCGTATCTCATCA +
Preference number: 4 (lower is better)
Translates to: HWWTPIIINGRTTKIKTSLRLAG*YHRISS
Trigger: TGATGAGATACGATGGTACCACCCTGCGAGACGGAG...ACTTGTTTTAATTTTTGTGGTCCTTCCGTTTATTATAATAGGCGTCCACCAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CAAAAAGAAAGAATGTTTGGGCAAGACTCAGACTCTCTCAGAGCCAGACACACTTCATTTTCAAACATTTaGAAGCTTCGGGTCGAATGG +
Preference number: 4 (lower is better)
Translates to: QKERMFGQDSDSLRARHTSFSNI*KLRVEW
Trigger: CCATTCGACCCGAAGCTTCCAAATGTTTGAAAATGA...AGTGTGTCTGGCTCTGAGAGAGTCTGAGTCTTGCCCAAACATTCTTTCTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
3UTR CAA 72 bp TCTCCTACTTGGCTGAGCTCAGAGCAATTGAGCTCTTaGCAAATGCAAGTCATTTGGCACAAAAAGAAAGAA +
Preference number: 4 (lower is better)
Translates to: SPTWLSSEQLSS*QMQVIWHKKKE
Trigger: TTCTTTCTTTTTGTGCCAAATGACTTGCATTTGCAAAGAGCTCAATTGCTCTGAGCTCAGCCAAGTAGGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp ACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTTCTCCAGAAAGAATTTGTaGTCGCCATTCAATAAGGTC +
Preference number: 4 (lower is better)
Translates to: TTSHDSEEDSYTSSLHSFSRKNL*SPFNKV
Trigger: GACCTTATTGAATGGCGATCACAAATTCTTTCTGGA...GAAGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp TCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTTCCTAAGATACAAACCACATTTTTaGGGTTCACAAACAAGGCCA +
Preference number: 4 (lower is better)
Translates to: SHDSEEDSYTSSLHSFLRYKPHF*GSQTRP
Trigger: TGGCCTTGTTTGTGAACCTCAAAAATGTGGTTTGTA...TCTTAGGAAGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp TCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTTCCTAAGACGTATCTCATCAGCTTaGCAAATGCTAGTGCAAATA +
Preference number: 4 (lower is better)
Translates to: SHDSEEDSYTSSLHSFLRRISSA*QMLVQI
Trigger: TATTTGCACTAGCATTTGTCAAGCTGATGAGATACG...TCTTAGGAAGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp CTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACTTTTCCCAAAAGTCTTaGTCAAGTGGGCATAATGGT +
Preference number: 4 (lower is better)
Translates to: LDTTSHDSEEDSYTSSLHFSQKS*SSGHNG
Trigger: ACCATTATGCCCACTTGATCAAGACTTTTGGGAAAA...GTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp CAAAAAGAAAGAATGTTTGGGCAAGACTCAGACTCTCTCAGAGCCAGACACACTATGACTGTTTCATGTTaGCCTTTTCCTTCAACTATC +
Preference number: 4 (lower is better)
Translates to: QKERMFGQDSDSLRARHTMTVSC*PFPSTI
Trigger: GATAGTTGAAGGAAAAGGGCAACATGAAACAGTCAT...AGTGTGTCTGGCTCTGAGAGAGTCTGAGTCTTGCCCAAACATTCTTTCTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp CATTGGTGGACGCCTATTATAATAAACGGAAGGACCACAAAAATTAAAACAAGTGTTACCCACAAACCCTaGCCCTTGTGGTTGACTTCT +
Preference number: 4 (lower is better)
Translates to: HWWTPIIINGRTTKIKTSVTHKP*PLWLTS
Trigger: AGAAGTCAACCACAAGGGGCAGGGTTTGTGGGTAAC...ACTTGTTTTAATTTTTGTGGTCCTTCCGTTTATTATAATAGGCGTCCACCAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp CATATGGATAATCATTGGTGGACGCCTATTATAATAAACGGAAGGACCACAAAAATCTCTCTGCAGTCATaGTGTGTGAAGAGGTCACTG +
Preference number: 4 (lower is better)
Translates to: HMDNHWWTPIIINGRTTKISLQS*CVKRSL
Trigger: CAGTGACCTCTTCACACAGCATGACTGCAGAGAGAT...TTTTGTGGTCCTTCCGTTTATTATAATAGGCGTCCACCAATGATTATCCATATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp CATTGGTGGACGCCTATTATAATAAACGGAAGGACCACAAAAATTAAAACAAGTCAAATTCCCGTAATCTaGCACGCTGCCTTTGAGAGG +
Preference number: 4 (lower is better)
Translates to: HWWTPIIINGRTTKIKTSQIPVI*HAAFER
Trigger: CCTCTCAAAGGCAGCGTGGCAGATTACGGGAATTTG...ACTTGTTTTAATTTTTGTGGTCCTTCCGTTTATTATAATAGGCGTCCACCAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp ATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTAAGCTTCGGGTCGAATaGAATTCACACTGCATCATA +
Preference number: 4 (lower is better)
Translates to: IQHPMTVRRILIHHHYTAKLRVE*NSHCII
Trigger: TATGATGCAGTGTGAATTCCATTCGACCCGAAGCTT...AGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp CATATGGATAATCATTGGTGGACGCCTATTATAATAAACGGAAGGACCACAAAATCTTCTTCAGTTCTTTaGGTTCATCCTGAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: HMDNHWWTPIIINGRTTKSSSVL*VHPEAE
Trigger: CTCTGCCTCAGGATGAACTCAAAGAACTGAAGAAGA...TTTTGTGGTCCTTCCGTTTATTATAATAGGCGTCCACCAATGATTATCCATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp AACTCCTTTGAAGAAAAAGCAGTCGCACGAAATGTTAACATCACAGGCCCAATGTTTTCAGCAATTCGCTaGGTTGCTCATAATCAAACA +
Preference number: 4 (lower is better)
Translates to: NSFEEKAVARNVNITGPMFSAIR*VAHNQT
Trigger: TGTTTGATTATGAGCAACTCAGCGAATTGCTGAAAA...CATTGGGCCTGTGATGTTAACATTTCGTGCGACTGCTTTTTCTTCAAAGGAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp CATTGGTGGACGCCTATTATAATAAACGGAAGGACCACAAAAATTAAAACAAGTCCACTCACTCCATGGTaGGAACTGAACTCCTTTGAA +
Preference number: 4 (lower is better)
Translates to: HWWTPIIINGRTTKIKTSPLTPW*ELNSFE
Trigger: TTCAAAGGAGTTCAGTTCTCACCATGGAGTGAGTGG...ACTTGTTTTAATTTTTGTGGTCCTTCCGTTTATTATAATAGGCGTCCACCAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp CAAAAAGAAAGAATGTTTGGGCAAGACTCAGACTCTCTCAGAGCCAGACACACTTCTTCGCTGTTGTTTTaGTTCCTTTATCAAAATCTC +
Preference number: 4 (lower is better)
Translates to: QKERMFGQDSDSLRARHTSSLLF*FLYQNL
Trigger: GAGATTTTGATAAAGGAAGCAAAACAACAGCGAAGA...AGTGTGTCTGGCTCTGAGAGAGTCTGAGTCTTGCCCAAACATTCTTTCTTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp CTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACTCCTATTTTCAATTATaGAGGGGAAATCAGGAGCTT +
Preference number: 4 (lower is better)
Translates to: LDTTSHDSEEDSYTSSLHSYFQL*RGNQEL
Trigger: AAGCTCCTGATTTCCCCTGCATAATTGAAAATAGGA...GTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp ACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTTCAAAAGAAAGAATGTTTaGGCAAGACTCAGACTCTCT +
Preference number: 4 (lower is better)
Translates to: TTSHDSEEDSYTSSLHSFKRKNV*ARLRLS
Trigger: AGAGAGTCTGAGTCTTGCCCAAACATTCTTTCTTTT...GAAGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp CATATGGATAATCATTGGTGGACGCCTATTATAATAAACGGAAGGACCACAAAAAGCATATCTGCATACTaGTTAATTGCTCGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: HMDNHWWTPIIINGRTTKSISAY*LIARRK
Trigger: CTTCCTGCGAGCAATTAATCAGTATGCAGATATGCT...TTTTGTGGTCCTTCCGTTTATTATAATAGGCGTCCACCAATGATTATCCATATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp ATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTTTTTCAGCAATTCGCTaGGTTGCTCATAATCAAACA +
Preference number: 4 (lower is better)
Translates to: IQHPMTVRRILIHHHYTAFSAIR*VAHNQT
Trigger: TGTTTGATTATGAGCAACTCAGCGAATTGCTGAAAA...AGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp TCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTTCCTAAGATGCATACTGATTAATTaGTCGCAGGAAGACTTTATT +
Preference number: 4 (lower is better)
Translates to: SHDSEEDSYTSSLHSFLRCILIN*SQEDFI
Trigger: AATAAAGTCTTCCTGCGAGCAATTAATCAGTATGCA...TCTTAGGAAGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CATATGGATAATCATTGGTGGACGCCTATTATAATAAACGGAAGGACCACAAAAAAGCTTCGGGTCGAATaGAATTCACACTGCATCATA +
Preference number: 4 (lower is better)
Translates to: HMDNHWWTPIIINGRTTKKLRVE*NSHCII
Trigger: TATGATGCAGTGTGAATTCCATTCGACCCGAAGCTT...TTTTGTGGTCCTTCCGTTTATTATAATAGGCGTCCACCAATGATTATCCATATG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACATGCAGTTGTATATATaGTTCTCTCGATCCACATAT +
Preference number: 4 (lower is better)
Translates to: LDTTSHDSEEDSYTSSLHMQLYI*FSRSTY
Trigger: ATATGTGGATCGAGAGAACCATATATACAACTGCAT...GTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp CATATGGATAATCATTGGTGGACGCCTATTATAATAAACGGAAGGACCACAAAATTGTTTATAACAGTCTaGAGGAAGTCATTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: HMDNHWWTPIIINGRTTKLFITV*RKSFSP
Trigger: AGGGGAGAATGACTTCCTTCAGACTGTTATAAACAA...TTTTGTGGTCCTTCCGTTTATTATAATAGGCGTCCACCAATGATTATCCATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp CATATGGATAATCATTGGTGGACGCCTATTATAATAAACGGAAGGACCACAAAATTGTTTTCATACAGTTaGTTGAACAGGATCCTGGAG +
Preference number: 4 (lower is better)
Translates to: HMDNHWWTPIIINGRTTKLFSYS*LNRILE
Trigger: CTCCAGGATCCTGTTCAATCAACTGTATGAAAACAA...TTTTGTGGTCCTTCCGTTTATTATAATAGGCGTCCACCAATGATTATCCATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp CATTGGTGGACGCCTATTATAATAAACGGAAGGACCACAAAAATTAAAACAAGTATCTTCCAGCTTCTTTaGTTCGGCCTTATAGACGAT +
Preference number: 4 (lower is better)
Translates to: HWWTPIIINGRTTKIKTSIFQLL*FGLIDD
Trigger: ATCGTCTATAAGGCCGAAGCAAAGAAGCTGGAAGAT...ACTTGTTTTAATTTTTGTGGTCCTTCCGTTTATTATAATAGGCGTCCACCAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR TCA 90 bp CATTGGTGGACGCCTATTATAATAAACGGAAGGACCACAAAAATTAAAACAAGTCGTATCTCATCAGCTTaGCAAATGCTAGTGCAAATA +
Preference number: 4 (lower is better)
Translates to: HWWTPIIINGRTTKIKTSRISSA*QMLVQI
Trigger: TATTTGCACTAGCATTTGTCAAGCTGATGAGATACG...ACTTGTTTTAATTTTTGTGGTCCTTCCGTTTATTATAATAGGCGTCCACCAATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR GCA 90 bp CATATGGATAATCATTGGTGGACGCCTATTATAATAAACGGAAGGACCACAAAAATGACTGTTTCATGTTaGCCTTTTCCTTCAACTATC +
Preference number: 4 (lower is better)
Translates to: HMDNHWWTPIIINGRTTKMTVSC*PFPSTI
Trigger: GATAGTTGAAGGAAAAGGGCAACATGAAACAGTCAT...TTTTGTGGTCCTTCCGTTTATTATAATAGGCGTCCACCAATGATTATCCATATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CCA 90 bp CATTGGTGGACGCCTATTATAATAAACGGAAGGACCACAAAAATTAAAACAAGTAAAAGAAAGAATGTTTaGGCAAGACTCAGACTCTCT +
Preference number: 4 (lower is better)
Translates to: HWWTPIIINGRTTKIKTSKRKNV*ARLRLS
Trigger: AGAGAGTCTGAGTCTTGCCCAAACATTCTTTCTTTT...ACTTGTTTTAATTTTTGTGGTCCTTCCGTTTATTATAATAGGCGTCCACCAATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CCA 90 bp CCACGCCGTACTTCTCCTCGCGCTTGGTGGGCACCCAGCGCGTCATaGCGCCGCCGGAGCCGCCGCGGGTCGGGCAGGAAACTCCGCGTC +
Preference number: 5 (lower is better)
Translates to: PRRTSPRAWWAPSAS*RRRSRRGSGRKLRV
Trigger: GACGCGGAGTTTCCTGCCCGACCCGCGGCGGCTCCGGCGGCGCCATGACGCGCTGGGTGCCCACCAAGCGCGAGGAGAAGTACGGCGTGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CCA 90 bp CATCATAGTTATAAAAAGCCACGCCGTACTTCTCCTCGCGCTTGGTaGGCACCCAGCGCGTCATGGCGCCGCCGGAGCCGCCGCGGGTCG +
Preference number: 5 (lower is better)
Translates to: HHSYKKPRRTSPRAW*APSASWRRRSRRGS
Trigger: CGACCCGCGGCGGCTCCGGCGGCGCCATGACGCGCTGGGTGCCCACCAAGCGCGAGGAGAAGTACGGCGTGGCTTTTTATAACTATGATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CCA 90 bp TGGCATCATAGTTATAAAAAGCCACGCCGTACTTCTCCTCGCGCTTaGTGGGCACCCAGCGCGTCATGGCGCCGCCGGAGCCGCCGCGGG +
Preference number: 5 (lower is better)
Translates to: WHHSYKKPRRTSPRA*WAPSASWRRRSRRG
Trigger: CCCGCGGCGGCTCCGGCGGCGCCATGACGCGCTGGGTGCCCACCAAGCGCGAGGAGAAGTACGGCGTGGCTTTTTATAACTATGATGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS GCA 90 bp GGGCATGGAGATGGGGAGGGGCAGCACACTCTTTCCAGAGAGGCTTaGGACGTCACTGCACGATCCCGGAGTCCACCGATGCCTGCTTGC +
Preference number: 5 (lower is better)
Translates to: GHGDGEGQHTLSREA*DVTARSRSPPMPAC
Trigger: GCAAGCAGGCATCGGTGGACTCCGGGATCGTGCAGTGACGTCGCAAGCCTCTCTGGAAAGAGTGTGCTGCCCCTCCCCATCTCCATGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CCA 90 bp TGCTCCTTCAGCTGTCCCTGCGTGGTGGCCTGGTACCCGTCCCGCTaGGTGAGGTGGGCCACACACACATCCTCCGACCACTTAAGAAGC +
Preference number: 5 (lower is better)
Translates to: CSFSCPCVVAWYPSR*VRWATHTSSDHLRS
Trigger: GCTTCTTAAGTGGTCGGAGGATGTGTGTGTGGCCCACCTCACCCAGCGGGACGGGTACCAGGCCACCACGCAGGGACAGCTGAAGGAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CCA 90 bp CTGCACGATCCCGGAGTCCACCGATGCCTGCTTGCGAGTTGTCTTTaGAGGGGGAGGAGGCGGAGTTTTGCTGGGCAGTGGAGGTGGCAG +
Preference number: 5 (lower is better)
Translates to: LHDPGVHRCLLASCL*RGRRRSFAGQWRWQ
Trigger: CTGCCACCTCCACTGCCCAGCAAAACTCCGCCTCCTCCCCCTCCAAAGACAACTCGCAAGCAGGCATCGGTGGACTCCGGGATCGTGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS GCA 90 bp GCTTGCGACGTCACTGCACGATCCCGGAGTCCACCGATGCCTGCTTaGGAGTTGTCTTTGGAGGGGGAGGAGGCGGAGTTTTGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: ACDVTARSRSPPMPA*ELSLEGEEAEFCWA
Trigger: TGCCCAGCAAAACTCCGCCTCCTCCCCCTCCAAAGACAACTCGCAAGCAGGCATCGGTGGACTCCGGGATCGTGCAGTGACGTCGCAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CCA 90 bp AGCTGTCCCTGCGTGGTGGCCTGGTACCCGTCCCGCTGGGTGAGGTaGGCCACACACACATCCTCCGACCACTTAAGAAGCTTTGCATGG +
Preference number: 5 (lower is better)
Translates to: SCPCVVAWYPSRWVR*ATHTSSDHLRSFAW
Trigger: CCATGCAAAGCTTCTTAAGTGGTCGGAGGATGTGTGTGTGGCCCACCTCACCCAGCGGGACGGGTACCAGGCCACCACGCAGGGACAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CCA 90 bp CAAATTCCCGTAATCTGCCACGCTGCCTTTGAGAGGCAGAGGGGGTaGGACATCGGCCACGTCCGCCCCCGTCATGCCGTTCAGCTCCAA +
Preference number: 5 (lower is better)
Translates to: QIPVICHAAFERQRG*DIGHVRPRHAVQLQ
Trigger: TTGGAGCTGAACGGCATGACGGGGGCGGACGTGGCCGATGTCCCACCCCCTCTGCCTCTCAAAGGCAGCGTGGCAGATTACGGGAATTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGGCCACTCTGCCACGCTGCCTTaGAGAGGCAGAGGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: PDPYLPPRPTLLHDAKGHSATLP*RGRGGG
Trigger: CCCACCCCCTCTGCCTCTCAAAGGCAGCGTGGCAGA...GTGGCCTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS GCA 90 bp AGAGGCTTGCGACGTCACTGCACGATCCCGGAGTCCACCGATGCCTaGTTGCGAGTTGTCTTTGGAGGGGGAGGAGGCGGAGTTTTGCTG +
Preference number: 5 (lower is better)
Translates to: RGLRRHCTIPESTDA*LRVVFGGGGGGVLL
Trigger: CAGCAAAACTCCGCCTCCTCCCCCTCCAAAGACAACTCGCAAGCAGGCATCGGTGGACTCCGGGATCGTGCAGTGACGTCGCAAGCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS GCA 90 bp CCAGAGAGGCTTGCGACGTCACTGCACGATCCCGGAGTCCACCGATaGCTGCTTGCGAGTTGTCTTTGGAGGGGGAGGAGGCGGAGTTTT +
Preference number: 5 (lower is better)
Translates to: PERLATSLHDPGVHR*LLASCLWRGRRRSF
Trigger: AAAACTCCGCCTCCTCCCCCTCCAAAGACAACTCGCAAGCAGGCATCGGTGGACTCCGGGATCGTGCAGTGACGTCGCAAGCCTCTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS TCA 90 bp CTTGGCCCTTGGTGTAACTGGAGGGGGTGTTTGCTGGGAGGACGGTaGCGAGGGGGACACCGAGAAGCGCCTTTCGCTTCCAATGACGTT +
Preference number: 5 (lower is better)
Translates to: LGPWCNWRGCLLGGR*RGGHREAPFASNDV
Trigger: AACGTCATTGGAAGCGAAAGGCGCTTCTCGGTGTCCCCCTCGTCACCGTCCTCCCAGCAAACACCCCCTCCAGTTACACCAAGGGCCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CCA 90 bp ATGGTGCAGCTCCCAAGGCTCTGCATGCTCTTGCCGGTGGCCGAGTaGCCCTTTTCTTCCAACTCTGCCTTCGTGGAGGGCAGACTCAAG +
Preference number: 5 (lower is better)
Translates to: MVQLPRLCMLLPVAE*PFSSNSAFVEGRLK
Trigger: CTTGAGTCTGCCCTCCACGAAGGCAGAGTTGGAAGAAAAGGGCCACTCGGCCACCGGCAAGAGCATGCAGAGCCTTGGGAGCTGCACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp TGGTCTGATGTAGGTTGGAGACACACCTCAACCAACGAAGTCACACCACCGGCTAGGCTCTGCATGCTCTaGCCGGTGGCCGAGTGGCCC +
Preference number: 5 (lower is better)
Translates to: WSDVGWRHTSTNEVTPPARLCML*PVAEWP
Trigger: GGGCCACTCGGCCACCGGCAAGAGCATGCAGAGCCT...AGCCGGTGGTGTGACTTCGTTGGTTGAGGTGTGTCTCCAACCTACATCAGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp ACATCCCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGGGACGTGCCTCTGGGTaGGCCCCACGTCCTTCCTGT +
Preference number: 5 (lower is better)
Translates to: TSRTHIYLPDPPCSMTLKGRASG*APRPSC
Trigger: ACAGGAAGGACGTGGGGCCAACCCAGAGGCACGTCC...CTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGGGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGGCCACCCTCCCAGACCCACCTaGCTCCATGACGCTAAAGGC +
Preference number: 5 (lower is better)
Translates to: PDPYLPPRPTLLHDAKGHPPRPT*LHDAKG
Trigger: GCCTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGG...GTGGCCTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS GCA 90 bp CTGCATGCTCTTGCCGGTGGCCGAGTGGCCCTTTTCTTCCAACTCTaGCTTCGTGGAGGGCAGACTCAAGTACGTGGCAGCATCTTCCAG +
Preference number: 5 (lower is better)
Translates to: LHALAGGRVALFFQL*LRGGQTQVRGSIFQ
Trigger: CTGGAAGATGCTGCCACGTACTTGAGTCTGCCCTCCACGAAGGCAGAGTTGGAAGAAAAGGGCCACTCGGCCACCGGCAAGAGCATGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CCA 90 bp TGCCTCCAGATGGTGGACCACTCTCGGAGTGTCGTGGTGACTTCCTaGATGAGGGGGAGGTCACCCGGGATGACTGTTTCATGTTGCCCT +
Preference number: 5 (lower is better)
Translates to: CLQMVDHSRSVVVTS*MRGRSPGMTVSCCP
Trigger: AGGGCAACATGAAACAGTCATCCCGGGTGACCTCCCCCTCATCCAGGAAGTCACCACGACACTCCGAGAGTGGTCCACCATCTGGAGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CCA 90 bp GTCATCCTTGTCCAGCTTGTCCTGGGACCTGGAGTGCATTTTCTTTaGCAGGAGAGGCTCCAGGGCAAACCCGTCGGAGCCTGGTCTGGA +
Preference number: 5 (lower is better)
Translates to: VILVQLVLGPGVHFL*QERLQGKPVGAWSG
Trigger: TCCAGACCAGGCTCCGACGGGTTTGCCCTGGAGCCTCTCCTGCCAAAGAAAATGCACTCCAGGTCCCAGGACAAGCTGGACAAGGATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp ACACACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATTACTTCTCCTCGCGCTaGGTGGGCACCCAGCGCGTC +
Preference number: 5 (lower is better)
Translates to: THSEAPNSDNYDSTSRTHYFSSR*VGTQRV
Trigger: GACGCGCTGGGTGCCCACCAAGCGCGAGGAGAAGTA...ATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp ACACACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATTCTGCCACGCTGCCTTaGAGAGGCAGAGGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: THSEAPNSDNYDSTSRTHSATLP*RGRGGG
Trigger: CCCACCCCCTCTGCCTCTCAAAGGCAGCGTGGCAGA...ATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CACACCACCGGCTGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGCCTCCCAGACCCACCTaGCTCCATGACGCTAAAGGC +
Preference number: 5 (lower is better)
Translates to: HTTGWNKEGLDTTSHDSEPPRPT*LHDAKG
Trigger: GCCTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGG...CTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCAGCCGGTGGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGGCCACGACATGTTCAGCGGCTaGTGTCGAATGGCGTCGTCC +
Preference number: 5 (lower is better)
Translates to: PDPYLPPRPTLLHDAKGHDMFSG*CRMASS
Trigger: GGACGACGCCATTCGACACAAGCCGCTGAACATGTC...GTGGCCTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623213.2
CDS GCA 90 bp ATGGAGAGCGGGTTGATGGGCAGGCTGGGGTCATCCAGGTGCTGCTaGACCATGCTGTTGATCTTGTCGTTCGTCAGCTGCATGGTCTCA +
Preference number: 5 (lower is better)
Translates to: MESGLMGRLGSSRCC*TMLLILSFVSCMVS
Trigger: TGAGACCATGCAGCTGACGAACGACAAGATCAACAGCATGGTGCAGCAGCACCTGGATGACCCCAGCCTGCCCATCAACCCGCTCTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS GCA 90 bp TCCTTCTCCAGGTCATCCTTGTCCAGCTTGTCCTGGGACCTGGAGTaGATTTTCTTTGGCAGGAGAGGCTCCAGGGCAAACCCGTCGGAG +
Preference number: 5 (lower is better)
Translates to: SFSRSSLSSLSWDLE*IFFGRRGSRANPSE
Trigger: CTCCGACGGGTTTGCCCTGGAGCCTCTCCTGCCAAAGAAAATGCACTCCAGGTCCCAGGACAAGCTGGACAAGGATGACCTGGAGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp TGGTCTGATGTAGGTTGGAGACACACCTCAACCAACGAAGTCACACCACCGGCTTGCTCGGCTAGCTCCTaGCCCAAGGCAATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: WSDVGWRHTSTNEVTPPACSASS*PKAMAS
Trigger: GGAGGCCATTGCCTTGGGCAAGGAGCTAGCCGAGCA...AGCCGGTGGTGTGACTTCGTTGGTTGAGGTGTGTCTCCAACCTACATCAGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp ACACACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATGCTTGCGAGTTGTCTTaGGAGGGGGAGGAGGCGGAG +
Preference number: 5 (lower is better)
Translates to: THSEAPNSDNYDSTSRTHACELS*EGEEAE
Trigger: CTCCGCCTCCTCCCCCTCCAAAGACAACTCGCAAGC...ATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS GCA 90 bp GAGATCTGGAAGGAGTCCTTGCTAATGGTGCAGCTCCCAAGGCTCTaGATGCTCTTGCCGGTGGCCGAGTGGCCCTTTTCTTCCAACTCT +
Preference number: 5 (lower is better)
Translates to: EIWKESLLMVQLPRL*MLLPVAEWPFSSNS
Trigger: AGAGTTGGAAGAAAAGGGCCACTCGGCCACCGGCAAGAGCATGCAGAGCCTTGGGAGCTGCACCATTAGCAAGGACTCCTTCCAGATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS GCA 90 bp CAGCTGTTTGAAACAGGCCTCCATCCTCTCGTGGAACGGCCTCAGTaGCTCCGTGACTTTGTCTCCATGGATTCTGATCCCTTCGGCCAG +
Preference number: 5 (lower is better)
Translates to: QLFETGLHPLVERPQ*LRDFVSMDSDPFGQ
Trigger: CTGGCCGAAGGGATCAGAATCCATGGAGACAAAGTCACGGAGGCACTGAGGCCGTTCCACGAGAGGATGGAGGCCTGTTTCAAACAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CCA 90 bp TCTTGCCGGTGGCCGAGTGGCCCTTTTCTTCCAACTCTGCCTTCGTaGAGGGCAGACTCAAGTACGTGGCAGCATCTTCCAGCTTCTTTG +
Preference number: 5 (lower is better)
Translates to: SCRWPSGPFLPTLPS*RADSSTWQHLPASL
Trigger: CAAAGAAGCTGGAAGATGCTGCCACGTACTTGAGTCTGCCCTCCACGAAGGCAGAGTTGGAAGAAAAGGGCCACTCGGCCACCGGCAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CACACCACCGGCTGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGAGGCCAGAGAAGGGGTaGCAGCAAACTTGGCTTGTC +
Preference number: 5 (lower is better)
Translates to: HTTGWNKEGLDTTSHDSERPEKG*QQTWLV
Trigger: GACAAGCCAAGTTTGCTGCAACCCCTTCTCTGGCCT...CTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCAGCCGGTGGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGGCCACAGTTTCCTGGTGTTGTaGTCCCTCAGCTCCATGCGA +
Preference number: 5 (lower is better)
Translates to: PDPYLPPRPTLLHDAKGHSFLVL*SLSSMR
Trigger: TCGCATGGAGCTGAGGGACAACAACACCAGGAAACT...GTGGCCTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp AGCCTCTCCTACTTGGCTGAGCTCAGAGCAATTGAGCTCTTTGCAAATGCAAGTAGGCTCTGCATGCTCTaGCCGGTGGCCGAGTGGCCC +
Preference number: 5 (lower is better)
Translates to: SLSYLAELRAIELFANASRLCML*PVAEWP
Trigger: GGGCCACTCGGCCACCGGCAAGAGCATGCAGAGCCT...ACTTGCATTTGCAAAGAGCTCAATTGCTCTGAGCTCAGCCAAGTAGGAGAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGGCCACCCTAGCCTCTCCTACTaGGCTGAGCTCAGAGCAATT +
Preference number: 5 (lower is better)
Translates to: PDPYLPPRPTLLHDAKGHPSLSY*AELRAI
Trigger: AATTGCTCTGAGCTCAGCCAAGTAGGAGAGGCTAGG...GTGGCCTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CACACCACCGGCTGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGCACAAACCCTGCCCCTaGTGGTTGACTTCTTTGGCA +
Preference number: 5 (lower is better)
Translates to: HTTGWNKEGLDTTSHDSEHKPCP*WLTSLA
Trigger: TGCCAAAGAAGTCAACCACAAGGGGCAGGGTTTGTG...CTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCAGCCGGTGGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp TGGTCTGATGTAGGTTGGAGACACACCTCAACCAACGAAGTCACACCACCGGCTTGCAGCAGGCTGGTGTaGGAGCGCCATTTCAAGAGC +
Preference number: 5 (lower is better)
Translates to: WSDVGWRHTSTNEVTPPACSRLV*ERHFKS
Trigger: GCTCTTGAAATGGCGCTCCAACACCAGCCTGCTGCA...AGCCGGTGGTGTGACTTCGTTGGTTGAGGTGTGTCTCCAACCTACATCAGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGGCCACGAGCGCACGATGAACTaGAAGATGGATTCTAGCGCT +
Preference number: 5 (lower is better)
Translates to: PDPYLPPRPTLLHDAKGHERTMN*KMDSSA
Trigger: AGCGCTAGAATCCATCTTCAAGTTCATCGTGCGCTC...GTGGCCTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGGCCACCAGTTGCAGGGACTCTaGAGTAAGGAAAGCAACAGC +
Preference number: 5 (lower is better)
Translates to: PDPYLPPRPTLLHDAKGHQLQGL*SKESNS
Trigger: GCTGTTGCTTTCCTTACTCAAGAGTCCCTGCAACTG...GTGGCCTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp TGGTCTGATGTAGGTTGGAGACACACCTCAACCAACGAAGTCACACCACCGGCTTCCACCGATGCCTGCTaGCGAGTTGTCTTTGGAGGG +
Preference number: 5 (lower is better)
Translates to: WSDVGWRHTSTNEVTPPASTDAC*RVVFGG
Trigger: CCCTCCAAAGACAACTCGCAAGCAGGCATCGGTGGA...AGCCGGTGGTGTGACTTCGTTGGTTGAGGTGTGTCTCCAACCTACATCAGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS TCA 90 bp ATGGAGCTGACAGTGCCTAGGGCTGATACAAATATGTGGGTAACATaGGAGCGCAGAGCGACGTCGAGCAGAACCCCTGTGCCCATGATG +
Preference number: 5 (lower is better)
Translates to: MELTVPRADTNMWVT*ERRATSSRTPVPMM
Trigger: CATCATGGGCACAGGGGTTCTGCTCGACGTCGCTCTGCGCTCTCATGTTACCCACATATTTGTATCAGCCCTAGGCACTGTCAGCTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495574.1
CDS-3UTR CAA 90 bp ACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATATCTCCCTGCCCCTTGTGGTaGACTTCTTTGGCAGCGATG +
Preference number: 5 (lower is better)
Translates to: TQRPPTLITTIAHPGPISPCPLW*TSLAAM
Trigger: CATCGCTGCCAAAGAAGTCAACCACAAGGGGCAGGG...AGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp ACACACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATGAATGTGGGGAACCCTaGTCCGTAGTAGCCAACAGC +
Preference number: 5 (lower is better)
Translates to: THSEAPNSDNYDSTSRTHECGEP*SVVANS
Trigger: GCTGTTGGCTACTACGGACAAGGGTTCCCCACATTC...ATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp TGGTCTGATGTAGGTTGGAGACACACCTCAACCAACGAAGTCACACCACCGGCTGGAGGCAGATCGAGTTaGGGCTTCACTGTGAAGCAC +
Preference number: 5 (lower is better)
Translates to: WSDVGWRHTSTNEVTPPAGGRSS*GFTVKH
Trigger: GTGCTTCACAGTGAAGCCCAAACTCGATCTGCCTCC...AGCCGGTGGTGTGACTTCGTTGGTTGAGGTGTGTCTCCAACCTACATCAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp TGGTCTGATGTAGGTTGGAGACACACCTCAACCAACGAAGTCACACCACCGGCTTGGAGTGCATTTTCTTaGGCAGGAGAGGCTCCAGGG +
Preference number: 5 (lower is better)
Translates to: WSDVGWRHTSTNEVTPPAWSAFS*AGEAPG
Trigger: CCCTGGAGCCTCTCCTGCCAAAGAAAATGCACTCCA...AGCCGGTGGTGTGACTTCGTTGGTTGAGGTGTGTCTCCAACCTACATCAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS TCA 90 bp GGGAAGGAAACCCATGCAACAATGGTGCTTCTTGATACTGAGTCATaGGCGGTGCATGATGCAAACTGGGGTTACAGAGCTGGAGGGGCC +
Preference number: 5 (lower is better)
Translates to: GKETHATMVLLDTES*AVHDANWGYRAGGA
Trigger: GGCCCCTCCAGCTCTGTAACCCCAGTTTGCATCATGCACCGCTCATGACTCAGTATCAAGAAGCACCATTGTTGCATGGGTTTCCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484400.5
CDS GCA 90 bp TTCACTACTTCACCACCATCGACTTTCATCAGCTGCCTCAAGTTCTaGTGCAGCAGGCTGGTGTTGGAGCGCCATTTCAAGAGCCCCAGA +
Preference number: 5 (lower is better)
Translates to: FTTSPPSTFISCLKF*CSRLVLERHFKSPR
Trigger: TCTGGGGCTCTTGAAATGGCGCTCCAACACCAGCCTGCTGCAGCAGAACTTGAGGCAGCTGATGAAAGTCGATGGTGGTGAAGTAGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS GCA 90 bp AAACCCATGCAACAATGGTGCTTCTTGATACTGAGTCATGAGCGGTaGATGATGCAAACTGGGGTTACAGAGCTGGAGGGGCCGGCAAGG +
Preference number: 5 (lower is better)
Translates to: KPMQQWCFLILSHER*MMQTGVTELEGPAR
Trigger: CCTTGCCGGCCCCTCCAGCTCTGTAACCCCAGTTTGCATCATGCACCGCTCATGACTCAGTATCAAGAAGCACCATTGTTGCATGGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484400.5
CDS GCA 90 bp CCCTCCGGGTGTCCAAACAGGGGAAGGAAACCCATGCAACAATGGTaGTTCTTGATACTGAGTCATGAGCGGTGCATGATGCAAACTGGG +
Preference number: 5 (lower is better)
Translates to: PSGCPNRGRKPMQQW*FLILSHERCMMQTG
Trigger: CCCAGTTTGCATCATGCACCGCTCATGACTCAGTATCAAGAAGCACCATTGTTGCATGGGTTTCCTTCCCCTGTTTGGACACCCGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484400.5
CDS-3UTR CAA 90 bp CACACCACCGGCTGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGTCCCTTTTCAGGTCTTaGCTTCCGAGGTCAGTAAAC +
Preference number: 5 (lower is better)
Translates to: HTTGWNKEGLDTTSHDSESLFRS*LPRSVN
Trigger: GTTTACTGACCTCGGAAGCAAAGACCTGAAAAGGGA...CTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCAGCCGGTGGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CCAACTCTGATAACTACGATAGCACATCCCGGACCCATATCTACCTCCCAGACCGAATGTGGGGAACCCTaGTCCGTAGTAGCCAACAGC +
Preference number: 5 (lower is better)
Translates to: PTLITTIAHPGPISTSQTECGEP*SVVANS
Trigger: GCTGTTGGCTACTACGGACAAGGGTTCCCCACATTC...GGTCTGGGAGGTAGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp TGGTCTGATGTAGGTTGGAGACACACCTCAACCAACGAAGTCACACCACCGGCTCGCCTGGTGGAGATGTaGTCTTCATTTTCTCGGCGT +
Preference number: 5 (lower is better)
Translates to: WSDVGWRHTSTNEVTPPARLVEM*SSFSRR
Trigger: ACGCCGAGAAAATGAAGACAACATCTCCACCAGGCG...AGCCGGTGGTGTGACTTCGTTGGTTGAGGTGTGTCTCCAACCTACATCAGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CCAACTCTGATAACTACGATAGCACATCCCGGACCCATATCTACCTCCCAGACCTTCTCCAGGTCATCCTaGTCCAGCTTGTCCTGGGAC +
Preference number: 5 (lower is better)
Translates to: PTLITTIAHPGPISTSQTFSRSS*SSLSWD
Trigger: GTCCCAGGACAAGCTGGACAAGGATGACCTGGAGAA...GGTCTGGGAGGTAGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CCAACTCTGATAACTACGATAGCACATCCCGGACCCATATCTACCTCCCAGACCTCTTTCCAGAGAGGCTaGCGACGTCACTGCACGATC +
Preference number: 5 (lower is better)
Translates to: PTLITTIAHPGPISTSQTSFQRG*RRHCTI
Trigger: GATCGTGCAGTGACGTCGCAAGCCTCTCTGGAAAGA...GGTCTGGGAGGTAGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACTACTTCTCCTCGCGCTaGGTGGGCACCCAGCGCGTC +
Preference number: 5 (lower is better)
Translates to: LDTTSHDSEEDSYTSSLHYFSSR*VGTQRV
Trigger: GACGCGCTGGGTGCCCACCAAGCGCGAGGAGAAGTA...GTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp TCAATTATGCAGGGGAAATCAGGAGCTTCCCTGGAGGGGTTGAACTTCATGGTCAGGCCAGAGAAGGGGTaGCAGCAAACTTGGCTTGTC +
Preference number: 5 (lower is better)
Translates to: SIMQGKSGASLEGLNFMVRPEKG*QQTWLV
Trigger: GACAAGCCAAGTTTGCTGCAACCCCTTCTCTGGCCT...GACCATGAAGTTCAACCCCTCCAGGGAAGCTCCTGATTTCCCCTGCATAATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CCAACTCTGATAACTACGATAGCACATCCCGGACCCATATCTACCTCCCAGACCGTCAGTTTCCTGGTGTaGTTGTCCCTCAGCTCCATG +
Preference number: 5 (lower is better)
Translates to: PTLITTIAHPGPISTSQTVSFLV*LSLSSM
Trigger: CATGGAGCTGAGGGACAACAACACCAGGAAACTGAC...GGTCTGGGAGGTAGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp TGGTCTGATGTAGGTTGGAGACACACCTCAACCAACGAAGTCACACCACCGGCTCAGTTGCAGGGACTCTaGAGTAAGGAAAGCAACAGC +
Preference number: 5 (lower is better)
Translates to: WSDVGWRHTSTNEVTPPAQLQGL*SKESNS
Trigger: GCTGTTGCTTTCCTTACTCAAGAGTCCCTGCAACTG...AGCCGGTGGTGTGACTTCGTTGGTTGAGGTGTGTCTCCAACCTACATCAGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CACACCACCGGCTGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGTGGCTCTCTTGGCACTaGAAAAATTCTCCAGTTGCA +
Preference number: 5 (lower is better)
Translates to: HTTGWNKEGLDTTSHDSEWLSWH*KNSPVA
Trigger: TGCAACTGGAGAATTTTTCAAGTGCCAAGAGAGCCA...CTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCAGCCGGTGGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp TGGTCTGATGTAGGTTGGAGACACACCTCAACCAACGAAGTCACACCACCGGCTGTTTTGGCGAGGTATTaGTGCTTCCTGCAGTGTTCC +
Preference number: 5 (lower is better)
Translates to: WSDVGWRHTSTNEVTPPAVLARY*CFLQCS
Trigger: GGAACACTGCAGGAAGCACAAATACCTCGCCAAAAC...AGCCGGTGGTGTGACTTCGTTGGTTGAGGTGTGTCTCCAACCTACATCAGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp ACATCCCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGCTCATGCGGTTTTCTTaGTTCTCGTCGTGCATGATG +
Preference number: 5 (lower is better)
Translates to: TSRTHIYLPDPPCSMTLKLMRFS*FSSCMM
Trigger: CATCATGCACGACGAGAACAAAGAAAACCGCATGAG...CTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp ACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATATCTCGCCTGGTGGAGATGTaGTCTTCATTTTCTCGGCGT +
Preference number: 5 (lower is better)
Translates to: TQRPPTLITTIAHPGPISRLVEM*SSFSRR
Trigger: ACGCCGAGAAAATGAAGACAACATCTCCACCAGGCG...AGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp ACACACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATACCATGCTGTTGATCTaGTCGTTCGTCAGCTGCATG +
Preference number: 5 (lower is better)
Translates to: THSEAPNSDNYDSTSRTHTMLLI*SFVSCM
Trigger: CATGCAGCTGACGAACGACAAGATCAACAGCATGGT...ATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp TGGTCTGATGTAGGTTGGAGACACACCTCAACCAACGAAGTCACACCACCGGCTAGTGCCTCCGTGACTTaGTCTCCATGGATTCTGATC +
Preference number: 5 (lower is better)
Translates to: WSDVGWRHTSTNEVTPPASASVT*SPWILI
Trigger: GATCAGAATCCATGGAGACAAAGTCACGGAGGCACT...AGCCGGTGGTGTGACTTCGTTGGTTGAGGTGTGTCTCCAACCTACATCAGACCA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp ACATCCCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGTTTTCCTTCAGCTGTTaGAAACAGGCCTCCATCCTC +
Preference number: 5 (lower is better)
Translates to: TSRTHIYLPDPPCSMTLKFSFSC*KQASIL
Trigger: GAGGATGGAGGCCTGTTTCAAACAGCTGAAGGAAAA...CTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACGGAGGAGGCGGAGTTTaGCTGGGCAGTGGAGGTGGC +
Preference number: 5 (lower is better)
Translates to: LDTTSHDSEEDSYTSSLHGGGGV*LGSGGG
Trigger: GCCACCTCCACTGCCCAGCAAAACTCCGCCTCCTCC...GTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CAAAAAGAAAGAATGTTTGGGCAAGACTCAGACTCTCTCAGAGCCAGACACACTGCTTGCGAGTTGTCTTaGGAGGGGGAGGAGGCGGAG +
Preference number: 5 (lower is better)
Translates to: QKERMFGQDSDSLRARHTACELS*EGEEAE
Trigger: CTCCGCCTCCTCCCCCTCCAAAGACAACTCGCAAGC...AGTGTGTCTGGCTCTGAGAGAGTCTGAGTCTTGCCCAAACATTCTTTCTTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CCA 90 bp ACAGAGCTGGAGGGGCCGGCAAGGATCTCGGCTTTCATGGAGCTTTaGAGAGGTTTATTTACAATGATAGAAGGTGCCGCTTCAGTCCAT +
Preference number: 5 (lower is better)
Translates to: TELEGPARISAFMEL*RGLFTMIEGAASVH
Trigger: ATGGACTGAAGCGGCACCTTCTATCATTGTAAATAAACCTCTCCAAAGCTCCATGAAAGCCGAGATCCTTGCCGGCCCCTCCAGCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484400.5
CDS-3UTR CAA 90 bp ACACACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATTCCCTTTTCAGGTCTTaGCTTCCGAGGTCAGTAAAC +
Preference number: 5 (lower is better)
Translates to: THSEAPNSDNYDSTSRTHSLFRS*LPRSVN
Trigger: GTTTACTGACCTCGGAAGCAAAGACCTGAAAAGGGA...ATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp TCAATTATGCAGGGGAAATCAGGAGCTTCCCTGGAGGGGTTGAACTTCATGGTCAGTTTCCTGGTGTTGTaGTCCCTCAGCTCCATGCGA +
Preference number: 5 (lower is better)
Translates to: SIMQGKSGASLEGLNFMVSFLVL*SLSSMR
Trigger: TCGCATGGAGCTGAGGGACAACAACACCAGGAAACT...GACCATGAAGTTCAACCCCTCCAGGGAAGCTCCTGATTTCCCCTGCATAATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp AACTCTGATAACTACGATAGCACATCCCGGACCCATATCTACCTCCCAGACCCACACAAACCCTGCCCCTaGTGGTTGACTTCTTTGGCA +
Preference number: 5 (lower is better)
Translates to: NSDNYDSTSRTHIYLPDPHKPCP*WLTSLA
Trigger: TGCCAAAGAAGTCAACCACAAGGGGCAGGGTTTGTG...TGGGTCTGGGAGGTAGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp TGGTCTGATGTAGGTTGGAGACACACCTCAACCAACGAAGTCACACCACCGGCTCATCTTCCAGCTTCTTaGCTTCGGCCTTATAGACGA +
Preference number: 5 (lower is better)
Translates to: WSDVGWRHTSTNEVTPPAHLPAS*LRPYRR
Trigger: TCGTCTATAAGGCCGAAGCAAAGAAGCTGGAAGATG...AGCCGGTGGTGTGACTTCGTTGGTTGAGGTGTGTCTCCAACCTACATCAGACCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp ACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATATCTGAGCGCACGATGAACTaGAAGATGGATTCTAGCGCT +
Preference number: 5 (lower is better)
Translates to: TQRPPTLITTIAHPGPISERTMN*KMDSSA
Trigger: AGCGCTAGAATCCATCTTCAAGTTCATCGTGCGCTC...AGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGGCCACCTTGTTTTCATACAGTaGATTGAACAGGATCCTGGA +
Preference number: 5 (lower is better)
Translates to: PDPYLPPRPTLLHDAKGHLVFIQ*IEQDPG
Trigger: TCCAGGATCCTGTTCAATCAACTGTATGAAAACAAG...GTGGCCTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp ATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTGGACGTGCCTCTGGGTaGGCCCCACGTCCTTCCTGT +
Preference number: 5 (lower is better)
Translates to: IQHPMTVRRILIHHHYTAGRASG*APRPSC
Trigger: ACAGGAAGGACGTGGGGCCAACCCAGAGGCACGTCC...AGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp TCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTTCCTAAGATGCTCGGCTAGCTCCTaGCCCAAGGCAATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: SHDSEEDSYTSSLHSFLRCSASS*PKAMAS
Trigger: GGAGGCCATTGCCTTGGGCAAGGAGCTAGCCGAGCA...TCTTAGGAAGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp TGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATGGAGGCAGATCGAGTTaGGGCTTCACTGTGAAGCAC +
Preference number: 5 (lower is better)
Translates to: WNKEGLDTTSHDSEEDSYGGRSS*GFTVKH
Trigger: GTGCTTCACAGTGAAGCCCAAACTCGATCTGCCTCC...ATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp AACTCTGATAACTACGATAGCACATCCCGGACCCATATCTACCTCCCAGACCCATGCTGCACCATGCTGTaGATCTTGTCGTTCGTCAGC +
Preference number: 5 (lower is better)
Translates to: NSDNYDSTSRTHIYLPDPCCTML*ILSFVS
Trigger: GCTGACGAACGACAAGATCAACAGCATGGTGCAGCA...TGGGTCTGGGAGGTAGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp ACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATATCTAGTGCCTCCGTGACTTaGTCTCCATGGATTCTGATC +
Preference number: 5 (lower is better)
Translates to: TQRPPTLITTIAHPGPISSASVT*SPWILI
Trigger: GATCAGAATCCATGGAGACAAAGTCACGGAGGCACT...AGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp AGCCTCTCCTACTTGGCTGAGCTCAGAGCAATTGAGCTCTTTGCAAATGCAAGTTTCTCCAGGTCATCCTaGTCCAGCTTGTCCTGGGAC +
Preference number: 5 (lower is better)
Translates to: SLSYLAELRAIELFANASFSRSS*SSLSWD
Trigger: GTCCCAGGACAAGCTGGACAAGGATGACCTGGAGAA...ACTTGCATTTGCAAAGAGCTCAATTGCTCTGAGCTCAGCCAAGTAGGAGAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGGCCACAAAAAGAAAGAATGTTaGGGCAAGACTCAGACTCTC +
Preference number: 5 (lower is better)
Translates to: PDPYLPPRPTLLHDAKGHKKKEC*GKTQTL
Trigger: GAGAGTCTGAGTCTTGCCCAAACATTCTTTCTTTTT...GTGGCCTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS TCA 90 bp TCGCCTGGTGGAGATGTTGTCTTCATTTTCTCGGCGTTTGGAAACTaGGTTAAGAGCCGAGCCTCAAAATCTTCCCGGCGCTCATACTCT +
Preference number: 5 (lower is better)
Translates to: SPGGDVVFIFSAFGN*VKSRASKSSRRSYS
Trigger: AGAGTATGAGCGCCGGGAAGATTTTGAGGCTCGGCTCTTAACTCAGTTTCCAAACGCCGAGAAAATGAAGACAACATCTCCACCAGGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS TCA 90 bp TGTCTGCAGCACAGAATTAGGAACAGCGTTTGCAGAGCATTTTATTaGAGCCAGCTTGGTCTCCAGGCAACACCACTGTTCCCAGCAGAC +
Preference number: 5 (lower is better)
Translates to: CLQHRIRNSVCRAFY*SQLGLQATPLFPAD
Trigger: GTCTGCTGGGAACAGTGGTGTTGCCTGGAGACCAAGCTGGCTTCAATAAAATGCTCTGCAAACGCTGTTCCTAATTCTGTGCTGCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495574.1
CDS GCA 90 bp GCTCATAATCAAACATTTCGTTCTCATACTGCTCGGCTAGCTCCTTaGCCAAGGCAATGGCCTCCTCCCACATCTTGCCTTTGTCGAAGT +
Preference number: 5 (lower is better)
Translates to: AHNQTFRSHTARLAP*PRQWPPPTSCLCRS
Trigger: ACTTCGACAAAGGCAAGATGTGGGAGGAGGCCATTGCCTTGGGCAAGGAGCTAGCCGAGCAGTATGAGAACGAAATGTTTGATTATGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CACACCACCGGCTGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGTTACAAACCACATTTTaGAGGTTCACAAACAAGGCC +
Preference number: 5 (lower is better)
Translates to: HTTGWNKEGLDTTSHDSELQTTF*RFTNKA
Trigger: GGCCTTGTTTGTGAACCTCAAAAATGTGGTTTGTAA...CTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCAGCCGGTGGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp TCAATTATGCAGGGGAAATCAGGAGCTTCCCTGGAGGGGTTGAACTTCATGGTCCTGCTCATCATGTCATaGATGGACCTGAAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: SIMQGKSGASLEGLNFMVLLIMS*MDLKSC
Trigger: GCAGCTCTTCAGGTCCATCAATGACATGATGAGCAG...GACCATGAAGTTCAACCCCTCCAGGGAAGCTCCTGATTTCCCCTGCATAATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp ACATCCCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGCTCATATCTCCGTACTaGTTAAGGATTTTGGCTCTC +
Preference number: 5 (lower is better)
Translates to: TSRTHIYLPDPPCSMTLKLISPY*LRILAL
Trigger: GAGAGCCAAAATCCTTAACAAGTACGGAGATATGAG...CTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGGGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp ATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTATGGGGATGGTGGCTTaGCGCAGCTCCGTCTCGGGA +
Preference number: 5 (lower is better)
Translates to: IQHPMTVRRILIHHHYTAMGMVA*RSSVSG
Trigger: TCCCGAGACGGAGCTGCGCAAAGCCACCATCCCCAT...AGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp ACATCCCGGACCCATATCTACCTCCCAGACCCACCTTGCTCCATGACGCTAAAGAAAGTTTCTCCTGTTTaGGCGAGGTATTTGTGCTTC +
Preference number: 5 (lower is better)
Translates to: TSRTHIYLPDPPCSMTLKKVSPV*ARYLCF
Trigger: GAAGCACAAATACCTCGCCAAAACAGGAGAAACTTT...CTTTAGCGTCATGGAGCAAGGTGGGTCTGGGAGGTAGATATGGGTCCGGGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CCAACTCTGATAACTACGATAGCACATCCCGGACCCATATCTACCTCCCAGACCTCTCTCCCTTCCGGATaGGCCGAGAATATTCAAATC +
Preference number: 5 (lower is better)
Translates to: PTLITTIAHPGPISTSQTSLPSG*AENIQI
Trigger: GATTTGAATATTCTCGGCCAATCCGGAAGGGAGAGA...GGTCTGGGAGGTAGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp AACTCTGATAACTACGATAGCACATCCCGGACCCATATCTACCTCCCAGACCCAACCATGCTGTTGATCTaGTCGTTCGTCAGCTGCATG +
Preference number: 5 (lower is better)
Translates to: NSDNYDSTSRTHIYLPDPTMLLI*SFVSCM
Trigger: CATGCAGCTGACGAACGACAAGATCAACAGCATGGT...TGGGTCTGGGAGGTAGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CAAAAAGAAAGAATGTTTGGGCAAGACTCAGACTCTCTCAGAGCCAGACACACTATGCCTGCTTGCGAGTaGTCTTTGGAGGGGGAGGAG +
Preference number: 5 (lower is better)
Translates to: QKERMFGQDSDSLRARHTMPACE*SLEGEE
Trigger: CTCCTCCCCCTCCAAAGACAACTCGCAAGCAGGCAT...AGTGTGTCTGGCTCTGAGAGAGTCTGAGTCTTGCCCAAACATTCTTTCTTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CAAAAAGAAAGAATGTTTGGGCAAGACTCAGACTCTCTCAGAGCCAGACACACTTCCACCGATGCCTGCTaGCGAGTTGTCTTTGGAGGG +
Preference number: 5 (lower is better)
Translates to: QKERMFGQDSDSLRARHTSTDAC*RVVFGG
Trigger: CCCTCCAAAGACAACTCGCAAGCAGGCATCGGTGGA...AGTGTGTCTGGCTCTGAGAGAGTCTGAGTCTTGCCCAAACATTCTTTCTTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CACACCACCGGCTGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGAAAAAGAAAGAATGTTaGGGCAAGACTCAGACTCTC +
Preference number: 5 (lower is better)
Translates to: HTTGWNKEGLDTTSHDSEKKKEC*GKTQTL
Trigger: GAGAGTCTGAGTCTTGCCCAAACATTCTTTCTTTTT...CTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCAGCCGGTGGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS GCA 90 bp GGCCGCAGGGGACTTATCGTTTCCGAAAGGATCACAGCCTCAGACTaGTGCAGGGAAATGTCGGTGGGTTTAAATTCTTTCTCAAATATC +
Preference number: 5 (lower is better)
Translates to: GRRGLIVSERITASD*CREMSVGLNSFSNI
Trigger: GATATTTGAGAAAGAATTTAAACCCACCGACATTTCCCTGCAGCAGTCTGAGGCTGTGATCCTTTCGGAAACGATAAGTCCCCTGCGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CCA 90 bp TGTGCACAGTGTCTCCGATCTGTAAAGAAAGTTCATCCGCTCCTCTaGCATCATAGTTATAAAAAGCCACGCCGTACTTCTCCTCGCGCT +
Preference number: 5 (lower is better)
Translates to: CAQCLRSVKKVHPLL*HHSYKKPRRTSPRA
Trigger: AGCGCGAGGAGAAGTACGGCGTGGCTTTTTATAACTATGATGCCAGAGGAGCGGATGAACTTTCTTTACAGATCGGAGACACTGTGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp TGGTCTGATGTAGGTTGGAGACACACCTCAACCAACGAAGTCACACCACCGGCTTTCTCACTGATGAATTaGGACTCCACAGGGTCATAT +
Preference number: 5 (lower is better)
Translates to: WSDVGWRHTSTNEVTPPAFSLMN*DSTGSY
Trigger: ATATGACCCTGTGGAGTCCAAATTCATCAGTGAGAA...AGCCGGTGGTGTGACTTCGTTGGTTGAGGTGTGTCTCCAACCTACATCAGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp AACTCCTTTGAAGAAAAAGCAGTCGCACGAAATGTTAACATCACAGGCCCAATGTGCAGCAGGCTGGTGTaGGAGCGCCATTTCAAGAGC +
Preference number: 5 (lower is better)
Translates to: NSFEEKAVARNVNITGPMCSRLV*ERHFKS
Trigger: GCTCTTGAAATGGCGCTCCAACACCAGCCTGCTGCA...CATTGGGCCTGTGATGTTAACATTTCGTGCGACTGCTTTTTCTTCAAAGGAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp TGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATCTGCTCATCATGTCATaGATGGACCTGAAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: WNKEGLDTTSHDSEEDSYLLIMS*MDLKSC
Trigger: GCAGCTCTTCAGGTCCATCAATGACATGATGAGCAG...ATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp ACACACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATAGGATTTTGGCTCTCTaGGCACTTGAAAAATTCTCC +
Preference number: 5 (lower is better)
Translates to: THSEAPNSDNYDSTSRTHRILAL*ALEKFS
Trigger: GGAGAATTTTTCAAGTGCCAAGAGAGCCAAAATCCT...ATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp AACTCTGATAACTACGATAGCACATCCCGGACCCATATCTACCTCCCAGACCCACTCATGCGGTTTTCTTaGTTCTCGTCGTGCATGATG +
Preference number: 5 (lower is better)
Translates to: NSDNYDSTSRTHIYLPDPLMRFS*FSSCMM
Trigger: CATCATGCACGACGAGAACAAAGAAAACCGCATGAG...TGGGTCTGGGAGGTAGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp TCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTTCCTAAGAATGCCTGCTTGCGAGTaGTCTTTGGAGGGGGAGGAG +
Preference number: 5 (lower is better)
Translates to: SHDSEEDSYTSSLHSFLRMPACE*SLEGEE
Trigger: CTCCTCCCCCTCCAAAGACAACTCGCAAGCAGGCAT...TCTTAGGAAGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp TGGTCTGATGTAGGTTGGAGACACACCTCAACCAACGAAGTCACACCACCGGCTGAGCAATTGAGCTCTTaGCAAATGCAAGTCATTTGG +
Preference number: 5 (lower is better)
Translates to: WSDVGWRHTSTNEVTPPAEQLSS*QMQVIW
Trigger: CCAAATGACTTGCATTTGCAAAGAGCTCAATTGCTC...AGCCGGTGGTGTGACTTCGTTGGTTGAGGTGTGTCTCCAACCTACATCAGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp ACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATATCTCTGAGCTCAGAGCAATaGAGCTCTTTGCAAATGCAA +
Preference number: 5 (lower is better)
Translates to: TQRPPTLITTIAHPGPISLSSEQ*SSLQMQ
Trigger: TTGCATTTGCAAAGAGCTCAATTGCTCTGAGCTCAG...AGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS GCA 90 bp TGGTCTGACATGCTGCTCATCATGTCATTGATGGACCTGAAGAGCTaGAGCAAAGATTCCACGAAGTCAGCCTCTCCCTTGTTTTCATAC +
Preference number: 5 (lower is better)
Translates to: WSDMLLIMSLMDLKS*SKDSTKSASPLFSY
Trigger: GTATGAAAACAAGGGAGAGGCTGACTTCGTGGAATCTTTGCTGCAGCTCTTCAGGTCCATCAATGACATGATGAGCAGCATGTCAGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp ACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATATCTCCACGTTCTTCGCTGTaGTTTTGCTTCCTTTATCAA +
Preference number: 5 (lower is better)
Translates to: TQRPPTLITTIAHPGPISPRSSL*FCFLYQ
Trigger: TTGATAAAGGAAGCAAAACAACAGCGAAGAACGTGG...AGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp TGGTCTGATGTAGGTTGGAGACACACCTCAACCAACGAAGTCACACCACCGGCTTCGTATCTCATCAGCTaGACAAATGCTAGTGCAAAT +
Preference number: 5 (lower is better)
Translates to: WSDVGWRHTSTNEVTPPASYLIS*TNASAN
Trigger: ATTTGCACTAGCATTTGTCAAGCTGATGAGATACGA...AGCCGGTGGTGTGACTTCGTTGGTTGAGGTGTGTCTCCAACCTACATCAGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CAAAAAGAAAGAATGTTTGGGCAAGACTCAGACTCTCTCAGAGCCAGACACACTATCTGGAAGGAGTCCTaGCTAATGGTGCAGCTCCCA +
Preference number: 5 (lower is better)
Translates to: QKERMFGQDSDSLRARHTIWKES*LMVQLP
Trigger: TGGGAGCTGCACCATTAGCAAGGACTCCTTCCAGAT...AGTGTGTCTGGCTCTGAGAGAGTCTGAGTCTTGCCCAAACATTCTTTCTTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp ACACACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATACCAATTTCACATCGTaGACGATCGTTGGTAAGTAT +
Preference number: 5 (lower is better)
Translates to: THSEAPNSDNYDSTSRTHTNFTS*TIVGKY
Trigger: ATACTTACCAACGATCGTCAACGATGTGAAATTGGT...ATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp ACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATATCTAAGCCCATGGGAACATaGAGGATGAATTCAGTAAAC +
Preference number: 5 (lower is better)
Translates to: TQRPPTLITTIAHPGPISKPMGT*RMNSVN
Trigger: GTTTACTGAATTCATCCTCAATGTTCCCATGGGCTT...AGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp TGGTCTGATGTAGGTTGGAGACACACCTCAACCAACGAAGTCACACCACCGGCTCAGGAAGACTTTATTTaGCACCATGTTCATGATCAC +
Preference number: 5 (lower is better)
Translates to: WSDVGWRHTSTNEVTPPAQEDFI*HHVHDH
Trigger: GTGATCATGAACATGGTGCAAAATAAAGTCTTCCTG...AGCCGGTGGTGTGACTTCGTTGGTTGAGGTGTGTCTCCAACCTACATCAGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp AACTCTGATAACTACGATAGCACATCCCGGACCCATATCTACCTCCCAGACCCATCATTTTCTCGGCGTTaGGAAACTGAGTTAAGAGCC +
Preference number: 5 (lower is better)
Translates to: NSDNYDSTSRTHIYLPDPSFSRR*ETELRA
Trigger: GGCTCTTAACTCAGTTTCCAAACGCCGAGAAAATGA...TGGGTCTGGGAGGTAGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp TGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATTCTCTCCCTTCCGGATaGGCCGAGAATATTCAAATC +
Preference number: 5 (lower is better)
Translates to: WNKEGLDTTSHDSEEDSYSLPSG*AENIQI
Trigger: GATTTGAATATTCTCGGCCAATCCGGAAGGGAGAGA...ATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp ACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTTCTGGAGTGCATTTTCTTaGGCAGGAGAGGCTCCAGGG +
Preference number: 5 (lower is better)
Translates to: TTSHDSEEDSYTSSLHSFWSAFS*AGEAPG
Trigger: CCCTGGAGCCTCTCCTGCCAAAGAAAATGCACTCCA...GAAGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CATTGGTGGACGCCTATTATAATAAACGGAAGGACCACAAAAATTAAAACAAGTGGAGGAGGCGGAGTTTaGCTGGGCAGTGGAGGTGGC +
Preference number: 5 (lower is better)
Translates to: HWWTPIIINGRTTKIKTSGGGGV*LGSGGG
Trigger: GCCACCTCCACTGCCCAGCAAAACTCCGCCTCCTCC...ACTTGTTTTAATTTTTGTGGTCCTTCCGTTTATTATAATAGGCGTCCACCAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACTCTTTCCAGAGAGGCTaGCGACGTCACTGCACGATC +
Preference number: 5 (lower is better)
Translates to: LDTTSHDSEEDSYTSSLHSFQRG*RRHCTI
Trigger: GATCGTGCAGTGACGTCGCAAGCCTCTCTGGAAAGA...GTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp TCAATTATGCAGGGGAAATCAGGAGCTTCCCTGGAGGGGTTGAACTTCATGGTCCTGAGCTCAGAGCAATaGAGCTCTTTGCAAATGCAA +
Preference number: 5 (lower is better)
Translates to: SIMQGKSGASLEGLNFMVLSSEQ*SSLQMQ
Trigger: TTGCATTTGCAAAGAGCTCAATTGCTCTGAGCTCAG...GACCATGAAGTTCAACCCCTCCAGGGAAGCTCCTGATTTCCCCTGCATAATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS TCA 90 bp TTGTGGTTGACTTCTTTGGCAGCGATGACTTTGTTTATAACAGTCTaGAGGAAGTCATTCTCCCCTGCCACCCTGGGTGAAAAACGGGAT +
Preference number: 5 (lower is better)
Translates to: LWLTSLAAMTLFITV*RKSFSPATLGEKRD
Trigger: ATCCCGTTTTTCACCCAGGGTGGCAGGGGAGAATGACTTCCTTCAGACTGTTATAAACAAAGTCATCGCTGCCAAAGAAGTCAACCACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623213.2
CDS GCA 90 bp CGCAGGGGACTTATCGTTTCCGAAAGGATCACAGCCTCAGACTGCTaGAGGGAAATGTCGGTGGGTTTAAATTCTTTCTCAAATATCTCT +
Preference number: 5 (lower is better)
Translates to: RRGLIVSERITASDC*REMSVGLNSFSNIS
Trigger: AGAGATATTTGAGAAAGAATTTAAACCCACCGACATTTCCCTGCAGCAGTCTGAGGCTGTGATCCTTTCGGAAACGATAAGTCCCCTGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS GCA 90 bp ACAAAACAGCAAGTAATCGTGCACAGCAGCCTTCCTCCATCCTCCTaGAGTTGTGATGGAACTGATGTCATGCAGTTGGTTATTTTGCAC +
Preference number: 5 (lower is better)
Translates to: TKQQVIVHSSLPPSS*SCDGTDVMQLVILH
Trigger: GTGCAAAATAACCAACTGCATGACATCAGTTCCATCACAACTGCAGGAGGATGGAGGAAGGCTGCTGTGCACGATTACTTGCTGTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464466.1
CDS-3UTR CAA 90 bp CTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACCATCTCCCTGTTATCTaGCACGTAGAGCTGCCTCCA +
Preference number: 5 (lower is better)
Translates to: LDTTSHDSEEDSYTSSLHHLPVI*HVELPP
Trigger: TGGAGGCAGCTCTACGTGCAAGATAACAGGGAGATG...GTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CCAACTCTGATAACTACGATAGCACATCCCGGACCCATATCTACCTCCCAGACCCTTGTTTTCATACAGTaGATTGAACAGGATCCTGGA +
Preference number: 5 (lower is better)
Translates to: PTLITTIAHPGPISTSQTLVFIQ*IEQDPG
Trigger: TCCAGGATCCTGTTCAATCAACTGTATGAAAACAAG...GGTCTGGGAGGTAGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CCAACTCTGATAACTACGATAGCACATCCCGGACCCATATCTACCTCCCAGACCACCAATTTCACATCGTaGACGATCGTTGGTAAGTAT +
Preference number: 5 (lower is better)
Translates to: PTLITTIAHPGPISTSQTTNFTS*TIVGKY
Trigger: ATACTTACCAACGATCGTCAACGATGTGAAATTGGT...GGTCTGGGAGGTAGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp TGGTCTGATGTAGGTTGGAGACACACCTCAACCAACGAAGTCACACCACCGGCTAATTCAGTAAACATTTaGCTGAGCTCTTTGGGATCA +
Preference number: 5 (lower is better)
Translates to: WSDVGWRHTSTNEVTPPANSVNI*LSSLGS
Trigger: TGATCCCAAAGAGCTCAGCAAAATGTTTACTGAATT...AGCCGGTGGTGTGACTTCGTTGGTTGAGGTGTGTCTCCAACCTACATCAGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp AGCCTCTCCTACTTGGCTGAGCTCAGAGCAATTGAGCTCTTTGCAAATGCAAGTTGGCTCTCTTGGCACTaGAAAAATTCTCCAGTTGCA +
Preference number: 5 (lower is better)
Translates to: SLSYLAELRAIELFANASWLSWH*KNSPVA
Trigger: TGCAACTGGAGAATTTTTCAAGTGCCAAGAGAGCCA...ACTTGCATTTGCAAAGAGCTCAATTGCTCTGAGCTCAGCCAAGTAGGAGAGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CATTGGTGGACGCCTATTATAATAAACGGAAGGACCACAAAAATTAAAACAAGTATGGGGATGGTGGCTTaGCGCAGCTCCGTCTCGGGA +
Preference number: 5 (lower is better)
Translates to: HWWTPIIINGRTTKIKTSMGMVA*RSSVSG
Trigger: TCCCGAGACGGAGCTGCGCAAAGCCACCATCCCCAT...ACTTGTTTTAATTTTTGTGGTCCTTCCGTTTATTATAATAGGCGTCCACCAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp ACACACTCAGAGGCCCCCAACTCTGATAACTACGATAGCACATCCCGGACCCATTTATCAAATAACACTTaGTACTGTTCGTCTCCTCTG +
Preference number: 5 (lower is better)
Translates to: THSEAPNSDNYDSTSRTHLSNNT*YCSSPL
Trigger: CAGAGGAGACGAACAGTACAAAGTGTTATTTGATAA...ATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGGGGGCCTCTGAGTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CCAACTCTGATAACTACGATAGCACATCCCGGACCCATATCTACCTCCCAGACCCAGCAATTCGCTGAGTaGCTCATAATCAAACATTTC +
Preference number: 5 (lower is better)
Translates to: PTLITTIAHPGPISTSQTQQFAE*LIIKHF
Trigger: GAAATGTTTGATTATGAGCAACTCAGCGAATTGCTG...GGTCTGGGAGGTAGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp AGCCTCTCCTACTTGGCTGAGCTCAGAGCAATTGAGCTCTTTGCAAATGCAAGTCAAGCAATCAGGTCCTaGAGCTTCTCGATCTTTTCA +
Preference number: 5 (lower is better)
Translates to: SLSYLAELRAIELFANASQAIRS*SFSIFS
Trigger: TGAAAAGATCGAGAAGCTCAAGGACCTGATTGCTTG...ACTTGCATTTGCAAAGAGCTCAATTGCTCTGAGCTCAGCCAAGTAGGAGAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACATGCTGAAGCTGAGCTaGGCCCTTGGTGTAACTGGA +
Preference number: 5 (lower is better)
Translates to: LDTTSHDSEEDSYTSSLHMLKLS*ALGVTG
Trigger: TCCAGTTACACCAAGGGCCAAGCTCAGCTTCAGCAT...GTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp ACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTTCCCTAGCCTCTCCTACTaGGCTGAGCTCAGAGCAATT +
Preference number: 5 (lower is better)
Translates to: TTSHDSEEDSYTSSLHSFPSLSY*AELRAI
Trigger: AATTGCTCTGAGCTCAGCCAAGTAGGAGAGGCTAGG...GAAGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp AACTCCTTTGAAGAAAAAGCAGTCGCACGAAATGTTAACATCACAGGCCCAATGGTTTTGGCGAGGTATTaGTGCTTCCTGCAGTGTTCC +
Preference number: 5 (lower is better)
Translates to: NSFEEKAVARNVNITGPMVLARY*CFLQCS
Trigger: GGAACACTGCAGGAAGCACAAATACCTCGCCAAAAC...CATTGGGCCTGTGATGTTAACATTTCGTGCGACTGCTTTTTCTTCAAAGGAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp AACTCTGATAACTACGATAGCACATCCCGGACCCATATCTACCTCCCAGACCCACAGCAATTCGCTGAGTaGCTCATAATCAAACATTTC +
Preference number: 5 (lower is better)
Translates to: NSDNYDSTSRTHIYLPDPQQFAE*LIIKHF
Trigger: GAAATGTTTGATTATGAGCAACTCAGCGAATTGCTG...TGGGTCTGGGAGGTAGATATGGGTCCGGGATGTGCTATCGTAGTTATCAGAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp TCAATTATGCAGGGGAAATCAGGAGCTTCCCTGGAGGGGTTGAACTTCATGGTCATATTCGCAAATTCATaGTCTGGGTTTTTCTCTCCC +
Preference number: 5 (lower is better)
Translates to: SIMQGKSGASLEGLNFMVIFANS*SGFFSP
Trigger: GGGAGAGAAAAACCCAGACAATGAATTTGCGAATAT...GACCATGAAGTTCAACCCCTCCAGGGAAGCTCCTGATTTCCCCTGCATAATTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp ATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTTGCTGCACCATGCTGTaGATCTTGTCGTTCGTCAGC +
Preference number: 5 (lower is better)
Translates to: IQHPMTVRRILIHHHYTACCTML*ILSFVS
Trigger: GCTGACGAACGACAAGATCAACAGCATGGTGCAGCA...AGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CAAAAAGAAAGAATGTTTGGGCAAGACTCAGACTCTCTCAGAGCCAGACACACTTTTTCCTTCAGCTGTTaGAAACAGGCCTCCATCCTC +
Preference number: 5 (lower is better)
Translates to: QKERMFGQDSDSLRARHTFSFSC*KQASIL
Trigger: GAGGATGGAGGCCTGTTTCAAACAGCTGAAGGAAAA...AGTGTGTCTGGCTCTGAGAGAGTCTGAGTCTTGCCCAAACATTCTTTCTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp ATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTATGCTGAAGCTGAGCTaGGCCCTTGGTGTAACTGGA +
Preference number: 5 (lower is better)
Translates to: IQHPMTVRRILIHHHYTAMLKLS*ALGVTG
Trigger: TCCAGTTACACCAAGGGCCAAGCTCAGCTTCAGCAT...AGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS TCA 90 bp CAGTTCTTTGAGTTCATCCTGAGGCAGAGTTCCAGAAAGAATTTGTaGTCGCCATTCAATAAGGTCATAGATCATGTGCCGCACACTTCG +
Preference number: 5 (lower is better)
Translates to: QFFEFILRQSSRKNL*SPFNKVIDHVPHTS
Trigger: CGAAGTGTGCGGCACATGATCTATGACCTTATTGAATGGCGATCACAAATTCTTTCTGGAACTCTGCCTCAGGATGAACTCAAAGAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS TCA 90 bp ACAGCTGTGGTCCTGTCCACTAAATGCGGAAACTCTTTTCGGATCTaGTGGATATCTCCAGGAAGTAATTTCAATGTTACCCACAAACCC +
Preference number: 5 (lower is better)
Translates to: TAVVLSTKCGNSFRI*WISPGSNFNVTHKP
Trigger: GGGTTTGTGGGTAACATTGAAATTACTTCCTGGAGATATCCATCAGATCCGAAAAGAGTTTCCGCATTTAGTGGACAGGACCACAGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS TCA 90 bp TCACATGCTCTAATCGTTTCCCATCCTCATCGTACACAGACACCGTaGCCTCCACGTTCTTCGCTGTTGTTTTGCTTCCTTTATCAAAAT +
Preference number: 5 (lower is better)
Translates to: SHALIVSHPHRTQTP*PPRSSLLFCFLYQN
Trigger: ATTTTGATAAAGGAAGCAAAACAACAGCGAAGAACGTGGAGGTCACGGTGTCTGTGTACGATGAGGATGGGAAACGATTAGAGCATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CCA 90 bp GAAGCACTGAATATACTGGCCAGGAGAGTTTTTAATATCGTCGCCTaGTGGAGATGTTGTCTTCATTTTCTCGGCGTTTGGAAACTGAGT +
Preference number: 5 (lower is better)
Translates to: EALNILARRVFNIVA*WRCCLHFLGVWKLS
Trigger: ACTCAGTTTCCAAACGCCGAGAAAATGAAGACAACATCTCCACCAGGCGACGATATTAAAAACTCTCCTGGCCAGTATATTCAGTGCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp TGGAACAAGGAGGGGCTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATAGTTCTTCAACACTTTaGTCAACTTCGTGTAGGCTA +
Preference number: 5 (lower is better)
Translates to: WNKEGLDTTSHDSEEDSYSSSTL*STSCRL
Trigger: TAGCCTACACGAAGTTGACAAAAGTGTTGAAGAACT...ATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAGCCCCTCCTTGTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp TCAATTATGCAGGGGAAATCAGGAGCTTCCCTGGAGGGGTTGAACTTCATGGTCTTATCAAATAACACTTaGTACTGTTCGTCTCCTCTG +
Preference number: 5 (lower is better)
Translates to: SIMQGKSGASLEGLNFMVLSNNT*YCSSPL
Trigger: CAGAGGAGACGAACAGTACAAAGTGTTATTTGATAA...GACCATGAAGTTCAACCCCTCCAGGGAAGCTCCTGATTTCCCCTGCATAATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp AGCCTCTCCTACTTGGCTGAGCTCAGAGCAATTGAGCTCTTTGCAAATGCAAGTACCATGAAAACAGACTaGACCTCAAACCACCTTAAA +
Preference number: 5 (lower is better)
Translates to: SLSYLAELRAIELFANASTMKTD*TSNHLK
Trigger: TTTAAGGTGGTTTGAGGTCAAGTCTGTTTTCATGGT...ACTTGCATTTGCAAAGAGCTCAATTGCTCTGAGCTCAGCCAAGTAGGAGAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS TCA 90 bp CCTCATATCTCCGTACTTGTTAAGGATTTTGGCTCTCTTGGCACTTaGAAAATTCTCCAGTTGCAGGGACTCTTGAGTAAGGAAAGCAAC +
Preference number: 5 (lower is better)
Translates to: PHISVLVKDFGSLGT*KILQLQGLLSKESN
Trigger: GTTGCTTTCCTTACTCAAGAGTCCCTGCAACTGGAGAATTTTTCAAGTGCCAAGAGAGCCAAAATCCTTAACAAGTACGGAGATATGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CATATGGATAATCATTGGTGGACGCCTATTATAATAAACGGAAGGACCACAAAACATCTCCCTGTTATCTaGCACGTAGAGCTGCCTCCA +
Preference number: 5 (lower is better)
Translates to: HMDNHWWTPIIINGRTTKHLPVI*HVELPP
Trigger: TGGAGGCAGCTCTACGTGCAAGATAACAGGGAGATG...TTTTGTGGTCCTTCCGTTTATTATAATAGGCGTCCACCAATGATTATCCATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CAAAAAGAAAGAATGTTTGGGCAAGACTCAGACTCTCTCAGAGCCAGACACACTCCACGTTCTTCGCTGTaGTTTTGCTTCCTTTATCAA +
Preference number: 5 (lower is better)
Translates to: QKERMFGQDSDSLRARHTPRSSL*FCFLYQ
Trigger: TTGATAAAGGAAGCAAAACAACAGCGAAGAACGTGG...AGTGTGTCTGGCTCTGAGAGAGTCTGAGTCTTGCCCAAACATTCTTTCTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp ATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTCATCTTCCAGCTTCTTaGCTTCGGCCTTATAGACGA +
Preference number: 5 (lower is better)
Translates to: IQHPMTVRRILIHHHYTAHLPAS*LRPYRR
Trigger: TCGTCTATAAGGCCGAAGCAAAGAAGCTGGAAGATG...AGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CAAAAAGAAAGAATGTTTGGGCAAGACTCAGACTCTCTCAGAGCCAGACACACTCTCATATCTCCGTACTaGTTAAGGATTTTGGCTCTC +
Preference number: 5 (lower is better)
Translates to: QKERMFGQDSDSLRARHTLISPY*LRILAL
Trigger: GAGAGCCAAAATCCTTAACAAGTACGGAGATATGAG...AGTGTGTCTGGCTCTGAGAGAGTCTGAGTCTTGCCCAAACATTCTTTCTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACCAAGCAATCAGGTCCTaGAGCTTCTCGATCTTTTCA +
Preference number: 5 (lower is better)
Translates to: LDTTSHDSEEDSYTSSLHQAIRS*SFSIFS
Trigger: TGAAAAGATCGAGAAGCTCAAGGACCTGATTGCTTG...GTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS TCA 90 bp AGTCCATTCAAAGCTCTTGTTAAGGATTTTGGCTCTCTTGGCACTTaGAAAATTCTCCAGTTGCAGGGACTCTTGAGTAAGGAAAGCAAC +
Preference number: 5 (lower is better)
Translates to: SPFKALVKDFGSLGT*KILQLQGLLSKESN
Trigger: GTTGCTTTCCTTACTCAAGAGTCCCTGCAACTGGAGAATTTTTCAAGTGCCAAGAGAGCCAAAATCCTTAACAAGAGCTTTGAATGGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484400.5
CDS GCA 90 bp GGCTTTCATGGAGCTTTGGAGAGGTTTATTTACAATGATAGAAGGTaGCGCTTCAGTCCATTCAAAGCTCTTGTTAAGGATTTTGGCTCT +
Preference number: 5 (lower is better)
Translates to: GFHGALERFIYNDRR*RFSPFKALVKDFGS
Trigger: AGAGCCAAAATCCTTAACAAGAGCTTTGAATGGACTGAAGCGGCACCTTCTATCATTGTAAATAAACCTCTCCAAAGCTCCATGAAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484400.5
CDS-3UTR CAA 90 bp CATTGGTGGACGCCTATTATAATAAACGGAAGGACCACAAAAATTAAAACAAGTGTCAGTTTCCTGGTGTaGTTGTCCCTCAGCTCCATG +
Preference number: 5 (lower is better)
Translates to: HWWTPIIINGRTTKIKTSVSFLV*LSLSSM
Trigger: CATGGAGCTGAGGGACAACAACACCAGGAAACTGAC...ACTTGTTTTAATTTTTGTGGTCCTTCCGTTTATTATAATAGGCGTCCACCAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp AACTCCTTTGAAGAAAAAGCAGTCGCACGAAATGTTAACATCACAGGCCCAATGTTGTGGTTGACTTCTTaGGCAGCGATGACTTTGTTT +
Preference number: 5 (lower is better)
Translates to: NSFEEKAVARNVNITGPMLWLTS*AAMTLF
Trigger: AAACAAAGTCATCGCTGCCAAAGAAGTCAACCACAA...CATTGGGCCTGTGATGTTAACATTTCGTGCGACTGCTTTTTCTTCAAAGGAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp ACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTTCGCGTGGCTGCTTTACTaGGTAGTAAATCACAGATTT +
Preference number: 5 (lower is better)
Translates to: TTSHDSEEDSYTSSLHSFAWLLY*VVNHRF
Trigger: AAATCTGTGATTTACTACCAAGTAAAGCAGCCACGC...GAAGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CAAAAAGAAAGAATGTTTGGGCAAGACTCAGACTCTCTCAGAGCCAGACACACTTCGTATCTCATCAGCTaGACAAATGCTAGTGCAAAT +
Preference number: 5 (lower is better)
Translates to: QKERMFGQDSDSLRARHTSYLIS*TNASAN
Trigger: ATTTGCACTAGCATTTGTCAAGCTGATGAGATACGA...AGTGTGTCTGGCTCTGAGAGAGTCTGAGTCTTGCCCAAACATTCTTTCTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CATTGGTGGACGCCTATTATAATAAACGGAAGGACCACAAAAATTAAAACAAGTATCTGGAAGGAGTCCTaGCTAATGGTGCAGCTCCCA +
Preference number: 5 (lower is better)
Translates to: HWWTPIIINGRTTKIKTSIWKES*LMVQLP
Trigger: TGGGAGCTGCACCATTAGCAAGGACTCCTTCCAGAT...ACTTGTTTTAATTTTTGTGGTCCTTCCGTTTATTATAATAGGCGTCCACCAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CTGGATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGGATTTTGGCTCTCTaGGCACTTGAAAAATTCTCC +
Preference number: 5 (lower is better)
Translates to: LDTTSHDSEEDSYTSSLHRILAL*ALEKFS
Trigger: GGAGAATTTTTCAAGTGCCAAGAGAGCCAAAATCCT...GTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTATCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp AACTCCTTTGAAGAAAAAGCAGTCGCACGAAATGTTAACATCACAGGCCCAATGCTCATTTTCAAACATTaGGAAGCTTCGGGTCGAATG +
Preference number: 5 (lower is better)
Translates to: NSFEEKAVARNVNITGPMLIFKH*EASGRM
Trigger: CATTCGACCCGAAGCTTCCAAATGTTTGAAAATGAG...CATTGGGCCTGTGATGTTAACATTTCGTGCGACTGCTTTTTCTTCAAAGGAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp ACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTTCAAAGTTTCTCCTGTTTaGGCGAGGTATTTGTGCTTC +
Preference number: 5 (lower is better)
Translates to: TTSHDSEEDSYTSSLHSFKVSPV*ARYLCF
Trigger: GAAGCACAAATACCTCGCCAAAACAGGAGAAACTTT...GAAGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CAAAAAGAAAGAATGTTTGGGCAAGACTCAGACTCTCTCAGAGCCAGACACACTTGCAGGTCACAGAGCTaGTACAAATACCTTATATAC +
Preference number: 5 (lower is better)
Translates to: QKERMFGQDSDSLRARHTCRSQS*YKYLIY
Trigger: GTATATAAGGTATTTGTACAAGCTCTGTGACCTGCA...AGTGTGTCTGGCTCTGAGAGAGTCTGAGTCTTGCCCAAACATTCTTTCTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp ATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTTCATTTTCTCGGCGTTaGGAAACTGAGTTAAGAGCC +
Preference number: 5 (lower is better)
Translates to: IQHPMTVRRILIHHHYTASFSRR*ETELRA
Trigger: GGCTCTTAACTCAGTTTCCAAACGCCGAGAAAATGA...AGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CAAAAAGAAAGAATGTTTGGGCAAGACTCAGACTCTCTCAGAGCCAGACACACTACCATGAAAACAGACTaGACCTCAAACCACCTTAAA +
Preference number: 5 (lower is better)
Translates to: QKERMFGQDSDSLRARHTTMKTD*TSNHLK
Trigger: TTTAAGGTGGTTTGAGGTCAAGTCTGTTTTCATGGT...AGTGTGTCTGGCTCTGAGAGAGTCTGAGTCTTGCCCAAACATTCTTTCTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp TCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTTCCTAAGAGAGCAATTGAGCTCTTaGCAAATGCAAGTCATTTGG +
Preference number: 5 (lower is better)
Translates to: SHDSEEDSYTSSLHSFLREQLSS*QMQVIW
Trigger: CCAAATGACTTGCATTTGCAAAGAGCTCAATTGCTC...TCTTAGGAAGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp ATACAACATCCCATGACAGTGAGGAGGATTCTTATACATCATCACTACACAGCTTTCTCACTGATGAATTaGGACTCCACAGGGTCATAT +
Preference number: 5 (lower is better)
Translates to: IQHPMTVRRILIHHHYTAFSLMN*DSTGSY
Trigger: ATATGACCCTGTGGAGTCCAAATTCATCAGTGAGAA...AGCTGTGTAGTGATGATGTATAAGAATCCTCCTCACTGTCATGGGATGTTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp AACTCCTTTGAAGAAAAAGCAGTCGCACGAAATGTTAACATCACAGGCCCAATGAGTTCTTCAACACTTTaGTCAACTTCGTGTAGGCTA +
Preference number: 5 (lower is better)
Translates to: NSFEEKAVARNVNITGPMSSSTL*STSCRL
Trigger: TAGCCTACACGAAGTTGACAAAAGTGTTGAAGAACT...CATTGGGCCTGTGATGTTAACATTTCGTGCGACTGCTTTTTCTTCAAAGGAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp AACTCCTTTGAAGAAAAAGCAGTCGCACGAAATGTTAACATCACAGGCCCAATGTGCAGGTCACAGAGCTaGTACAAATACCTTATATAC +
Preference number: 5 (lower is better)
Translates to: NSFEEKAVARNVNITGPMCRSQS*YKYLIY
Trigger: GTATATAAGGTATTTGTACAAGCTCTGTGACCTGCA...CATTGGGCCTGTGATGTTAACATTTCGTGCGACTGCTTTTTCTTCAAAGGAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CATATGGATAATCATTGGTGGACGCCTATTATAATAAACGGAAGGACCACAAAAGGGGTTGCAGCAAACTaGGCTTGTCTGTTAATATCT +
Preference number: 5 (lower is better)
Translates to: HMDNHWWTPIIINGRTTKGVAAN*ACLLIS
Trigger: AGATATTAACAGACAAGCCAAGTTTGCTGCAACCCC...TTTTGTGGTCCTTCCGTTTATTATAATAGGCGTCCACCAATGATTATCCATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS TCA 90 bp AGCTCTGGGAATTTGACAGGTACAGTATTAAGTAAAAACCTTCTCTaGAGTCTTATGGGAAAGGTTGACCACAAAACAGCAAGTAATCGT +
Preference number: 5 (lower is better)
Translates to: SSGNLTGTVLSKNLL*SLMGKVDHKTASNR
Trigger: ACGATTACTTGCTGTTTTGTGGTCAACCTTTCCCATAAGACTTCAGAGAAGGTTTTTACTTAATACTGTACCTGTCAAATTCCCAGAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464466.1
CDS-3UTR CAA 90 bp CATATGGATAATCATTGGTGGACGCCTATTATAATAAACGGAAGGACCACAAAATTGTGGTTGACTTCTTaGGCAGCGATGACTTTGTTT +
Preference number: 5 (lower is better)
Translates to: HMDNHWWTPIIINGRTTKLWLTS*AAMTLF
Trigger: AAACAAAGTCATCGCTGCCAAAGAAGTCAACCACAA...TTTTGTGGTCCTTCCGTTTATTATAATAGGCGTCCACCAATGATTATCCATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CATATGGATAATCATTGGTGGACGCCTATTATAATAAACGGAAGGACCACAAAAGCGTGGCTGCTTTACTaGGTAGTAAATCACAGATTT +
Preference number: 5 (lower is better)
Translates to: HMDNHWWTPIIINGRTTKAWLLY*VVNHRF
Trigger: AAATCTGTGATTTACTACCAAGTAAAGCAGCCACGC...TTTTGTGGTCCTTCCGTTTATTATAATAGGCGTCCACCAATGATTATCCATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CATATGGATAATCATTGGTGGACGCCTATTATAATAAACGGAAGGACCACAAAAAAGCCCATGGGAACATaGAGGATGAATTCAGTAAAC +
Preference number: 5 (lower is better)
Translates to: HMDNHWWTPIIINGRTTKKPMGT*RMNSVN
Trigger: GTTTACTGAATTCATCCTCAATGTTCCCATGGGCTT...TTTTGTGGTCCTTCCGTTTATTATAATAGGCGTCCACCAATGATTATCCATATG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS TCA 90 bp TTTTCCTCTTGTAACCTTTCCTCCACTTGTTTAGAAGCTATTTCATaGGCTCTGAAGAGACTAATCGTGCTAGTTAATTCTGGATCCAAA +
Preference number: 5 (lower is better)
Translates to: FSSCNLSSTCLEAIS*ALKRLIVLVNSGSK
Trigger: TTTGGATCCAGAATTAACTAGCACGATTAGTCTCTTCAGAGCTCATGAAATAGCTTCTAAACAAGTGGAGGAAAGGTTACAAGAGGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CATATGGATAATCATTGGTGGACGCCTATTATAATAAACGGAAGGACCACAAAATTACAAACCACATTTTaGAGGTTCACAAACAAGGCC +
Preference number: 5 (lower is better)
Translates to: HMDNHWWTPIIINGRTTKLQTTF*RFTNKA
Trigger: GGCCTTGTTTGTGAACCTCAAAAATGTGGTTTGTAA...TTTTGTGGTCCTTCCGTTTATTATAATAGGCGTCCACCAATGATTATCCATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CATATGGATAATCATTGGTGGACGCCTATTATAATAAACGGAAGGACCACAAAATACTTGTTAAGGATTTaGGCTCTCTTGGCACTTGAA +
Preference number: 5 (lower is better)
Translates to: HMDNHWWTPIIINGRTTKYLLRI*ALLALE
Trigger: TTCAAGTGCCAAGAGAGCCAAAATCCTTAACAAGTA...TTTTGTGGTCCTTCCGTTTATTATAATAGGCGTCCACCAATGATTATCCATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CATATGGATAATCATTGGTGGACGCCTATTATAATAAACGGAAGGACCACAAAAATATTCGCAAATTCATaGTCTGGGTTTTTCTCTCCC +
Preference number: 5 (lower is better)
Translates to: HMDNHWWTPIIINGRTTKIFANS*SGFFSP
Trigger: GGGAGAGAAAAACCCAGACAATGAATTTGCGAATAT...TTTTGTGGTCCTTCCGTTTATTATAATAGGCGTCCACCAATGATTATCCATATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CATATGGATAATCATTGGTGGACGCCTATTATAATAAACGGAAGGACCACAAAAAATTCAGTAAACATTTaGCTGAGCTCTTTGGGATCA +
Preference number: 5 (lower is better)
Translates to: HMDNHWWTPIIINGRTTKNSVNI*LSSLGS
Trigger: TGATCCCAAAGAGCTCAGCAAAATGTTTACTGAATT...TTTTGTGGTCCTTCCGTTTATTATAATAGGCGTCCACCAATGATTATCCATATG
37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CATTGGTGGACGCCTATTATAATAAACGGAAGGACCACAAAAATTAAAACAAGTCAGGAAGACTTTATTTaGCACCATGTTCATGATCAC +
Preference number: 5 (lower is better)
Translates to: HWWTPIIINGRTTKIKTSQEDFI*HHVHDH
Trigger: GTGATCATGAACATGGTGCAAAATAAAGTCTTCCTG...ACTTGTTTTAATTTTTGTGGTCCTTCCGTTTATTATAATAGGCGTCCACCAATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS-3UTR CAA 90 bp CATTGGTGGACGCCTATTATAATAAACGGAAGGACCACAAAAATTAAAACAAGTTACTTGTTAAGGATTTaGGCTCTCTTGGCACTTGAA +
Preference number: 5 (lower is better)
Translates to: HWWTPIIINGRTTKIKTSYLLRI*ALLALE
Trigger: TTCAAGTGCCAAGAGAGCCAAAATCCTTAACAAGTA...ACTTGTTTTAATTTTTGTGGTCCTTCCGTTTATTATAATAGGCGTCCACCAATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS TCA 72 bp AGGCCACAGACAGAGGGCGGGATGAGGAAGGCATCGTaGAGGACCGCACCATGGACCGGGGGCGGCTGCCTC +
Preference number: 6 (lower is better)
Translates to: RPQTEGGMRKAS*RTAPWTGGGCL
Trigger: GAGGCAGCCGCCCCCGGTCCATGGTGCGGTCCTTCACGATGCCTTCCTCATCCCGCCCTCTGTCTGTGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CCA 72 bp AGCTGTCCCTGCGTGGTGGCCTGGTACCCGTCCCGCTaGGTGAGGTGGGCCACACACACATCCTCCGACCAC +
Preference number: 6 (lower is better)
Translates to: SCPCVVAWYPSR*VRWATHTSSDH
Trigger: GTGGTCGGAGGATGTGTGTGTGGCCCACCTCACCCAGCGGGACGGGTACCAGGCCACCACGCAGGGACAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CCA 72 bp TATAAAAAGCCACGCCGTACTTCTCCTCGCGCTTGGTaGGCACCCAGCGCGTCATGGCGCCGCCGGAGCCGC +
Preference number: 6 (lower is better)
Translates to: YKKPRRTSPRAW*APSASWRRRSR
Trigger: GCGGCTCCGGCGGCGCCATGACGCGCTGGGTGCCCACCAAGCGCGAGGAGAAGTACGGCGTGGCTTTTTATA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS GCA 72 bp CGACGTCACTGCACGATCCCGGAGTCCACCGATGCCTaGTTGCGAGTTGTCTTTGGAGGGGGAGGAGGCGGA +
Preference number: 6 (lower is better)
Translates to: RRHCTIPESTDA*LRVVFGGGGGG
Trigger: TCCGCCTCCTCCCCCTCCAAAGACAACTCGCAAGCAGGCATCGGTGGACTCCGGGATCGTGCAGTGACGTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CCA 72 bp AGTTATAAAAAGCCACGCCGTACTTCTCCTCGCGCTTaGTGGGCACCCAGCGCGTCATGGCGCCGCCGGAGC +
Preference number: 6 (lower is better)
Translates to: SYKKPRRTSPRA*WAPSASWRRRS
Trigger: GCTCCGGCGGCGCCATGACGCGCTGGGTGCCCACCAAGCGCGAGGAGAAGTACGGCGTGGCTTTTTATAACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CCA 72 bp TGCGTGGTGGCCTGGTACCCGTCCCGCTGGGTGAGGTaGGCCACACACACATCCTCCGACCACTTAAGAAGC +
Preference number: 6 (lower is better)
Translates to: CVVAWYPSRWVR*ATHTSSDHLRS
Trigger: GCTTCTTAAGTGGTCGGAGGATGTGTGTGTGGCCCACCTCACCCAGCGGGACGGGTACCAGGCCACCACGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CCA 72 bp GGAGAGGCTCCAGGGCAAACCCGTCGGAGCCTGGTCTaGAAGGGGTGCTGTCCGATGAGAGGGAAGAGACAG +
Preference number: 6 (lower is better)
Translates to: GEAPGQTRRSLV*KGCCPMRGKRQ
Trigger: CTGTCTCTTCCCTCTCATCGGACAGCACCCCTTCCAGACCAGGCTCCGACGGGTTTGCCCTGGAGCCTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CCA 72 bp AGCTTGGCCCTTGGTGTAACTGGAGGGGGTGTTTGCTaGGAGGACGGTGACGAGGGGGACACCGAGAAGCGC +
Preference number: 6 (lower is better)
Translates to: SLALGVTGGGVC*EDGDEGDTEKR
Trigger: GCGCTTCTCGGTGTCCCCCTCGTCACCGTCCTCCCAGCAAACACCCCCTCCAGTTACACCAAGGGCCAAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CAA 90 bp GGCTTGCGACGTCACTGCACGATCCCGGAGTCCACCGATGCCTGCTaGCGAGTTGTCTTTGGAGGGGGAGGAGGCGGAGTTTTGCTGGGC +
Preference number: 6 (lower is better)
Translates to: GLRRHCTIPESTDAC*RVVFGGGGGGVLLG
Trigger: GCCCAGCAAAACTCCGCCTCCTCCCCCTCCAAAGACAACTCGCAAGCAGGCATCGGTGGACTCCGGGATCGTGCAGTGACGTCGCAAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CAA 90 bp ACTGCACGATCCCGGAGTCCACCGATGCCTGCTTGCGAGTTGTCTTaGGAGGGGGAGGAGGCGGAGTTTTGCTGGGCAGTGGAGGTGGCA +
Preference number: 6 (lower is better)
Translates to: TARSRSPPMPACELS*EGEEAEFCWAVEVA
Trigger: TGCCACCTCCACTGCCCAGCAAAACTCCGCCTCCTCCCCCTCCAAAGACAACTCGCAAGCAGGCATCGGTGGACTCCGGGATCGTGCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CAA 90 bp GACGTCACTGCACGATCCCGGAGTCCACCGATGCCTGCTTGCGAGTaGTCTTTGGAGGGGGAGGAGGCGGAGTTTTGCTGGGCAGTGGAG +
Preference number: 6 (lower is better)
Translates to: DVTARSRSPPMPACE*SLEGEEAEFCWAVE
Trigger: CTCCACTGCCCAGCAAAACTCCGCCTCCTCCCCCTCCAAAGACAACTCGCAAGCAGGCATCGGTGGACTCCGGGATCGTGCAGTGACGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS TCA 72 bp TGGTGTAACTGGAGGGGGTGTTTGCTGGGAGGACGGTaGCGAGGGGGACACCGAGAAGCGCCTTTCGCTTCC +
Preference number: 6 (lower is better)
Translates to: WCNWRGCLLGGR*RGGHREAPFAS
Trigger: GGAAGCGAAAGGCGCTTCTCGGTGTCCCCCTCGTCACCGTCCTCCCAGCAAACACCCCCTCCAGTTACACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS GCA 72 bp CTTGCGACGTCACTGCACGATCCCGGAGTCCACCGATaGCTGCTTGCGAGTTGTCTTTGGAGGGGGAGGAGG +
Preference number: 6 (lower is better)
Translates to: LATSLHDPGVHR*LLASCLWRGRR
Trigger: CCTCCTCCCCCTCCAAAGACAACTCGCAAGCAGGCATCGGTGGACTCCGGGATCGTGCAGTGACGTCGCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS GCA 72 bp GATGGGGAGGGGCAGCACACTCTTTCCAGAGAGGCTTaGGACGTCACTGCACGATCCCGGAGTCCACCGATG +
Preference number: 6 (lower is better)
Translates to: DGEGQHTLSREA*DVTARSRSPPM
Trigger: CATCGGTGGACTCCGGGATCGTGCAGTGACGTCGCAAGCCTCTCTGGAAAGAGTGTGCTGCCCCTCCCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CAA 72 bp GCACGATCCCGGAGTCCACCGATGCCTGCTTGCGAGTaGTCTTTGGAGGGGGAGGAGGCGGAGTTTTGCTGG +
Preference number: 6 (lower is better)
Translates to: ARSRSPPMPACE*SLEGEEAEFCW
Trigger: CCAGCAAAACTCCGCCTCCTCCCCCTCCAAAGACAACTCGCAAGCAGGCATCGGTGGACTCCGGGATCGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CAA 72 bp CGTCACTGCACGATCCCGGAGTCCACCGATGCCTGCTaGCGAGTTGTCTTTGGAGGGGGAGGAGGCGGAGTT +
Preference number: 6 (lower is better)
Translates to: RHCTIPESTDAC*RVVFGGGGGGV
Trigger: AACTCCGCCTCCTCCCCCTCCAAAGACAACTCGCAAGCAGGCATCGGTGGACTCCGGGATCGTGCAGTGACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS TCA 72 bp ACGAGGGGGACACCGAGAAGCGCCTTTCGCTTCCAATaGCGTTCATCACCTGGCTCTTCGGTCTCTGGGGCC +
Preference number: 6 (lower is better)
Translates to: TRGTPRSAFRFQ*RSSPGSSVSGA
Trigger: GGCCCCAGAGACCGAAGAGCCAGGTGATGAACGTCATTGGAAGCGAAAGGCGCTTCTCGGTGTCCCCCTCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS GCA 72 bp CTTGCCGGTGGCCGAGTGGCCCTTTTCTTCCAACTCTaGCTTCGTGGAGGGCAGACTCAAGTACGTGGCAGC +
Preference number: 6 (lower is better)
Translates to: LAGGRVALFFQL*LRGGQTQVRGS
Trigger: GCTGCCACGTACTTGAGTCTGCCCTCCACGAAGGCAGAGTTGGAAGAAAAGGGCCACTCGGCCACCGGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CCA 72 bp CTCCAAAAGGTCGCCGCAACCCCGAGGTCAGTTTCCTaGTGTTGTTGTCCCTCAGCTCCATGCGACCCACGC +
Preference number: 6 (lower is better)
Translates to: LQKVAATPRSVS*CCCPSAPCDPR
Trigger: GCGTGGGTCGCATGGAGCTGAGGGACAACAACACCAGGAAACTGACCTCGGGGTTGCGGCGACCTTTTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CCA 72 bp TGGTGCAGCTCCCAAGGCTCTGCATGCTCTTGCCGGTaGCCGAGTGGCCCTTTTCTTCCAACTCTGCCTTCG +
Preference number: 6 (lower is better)
Translates to: WCSSQGSACSCR*PSGPFLPTLPS
Trigger: CGAAGGCAGAGTTGGAAGAAAAGGGCCACTCGGCCACCGGCAAGAGCATGCAGAGCCTTGGGAGCTGCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CAA 72 bp GGTCGCCGCAACCCCGAGGTCAGTTTCCTGGTGTTGTaGTCCCTCAGCTCCATGCGACCCACGCGAACAATC +
Preference number: 6 (lower is better)
Translates to: GRRNPEVSFLVL*SLSSMRPTRTI
Trigger: GATTGTTCGCGTGGGTCGCATGGAGCTGAGGGACAACAACACCAGGAAACTGACCTCGGGGTTGCGGCGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CAA 72 bp AGATGGGGAGGGGCAGCACACTCTTTCCAGAGAGGCTaGCGACGTCACTGCACGATCCCGGAGTCCACCGAT +
Preference number: 6 (lower is better)
Translates to: RWGGAAHSFQRG*RRHCTIPESTD
Trigger: ATCGGTGGACTCCGGGATCGTGCAGTGACGTCGCAAGCCTCTCTGGAAAGAGTGTGCTGCCCCTCCCCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS GCA 72 bp GGGTTGATGGGCAGGCTGGGGTCATCCAGGTGCTGCTaGACCATGCTGTTGATCTTGTCGTTCGTCAGCTGC +
Preference number: 6 (lower is better)
Translates to: GLMGRLGSSRCC*TMLLILSFVSC
Trigger: GCAGCTGACGAACGACAAGATCAACAGCATGGTGCAGCAGCACCTGGATGACCCCAGCCTGCCCATCAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS GCA 72 bp AGCGGGTTGATGGGCAGGCTGGGGTCATCCAGGTGCTaGTGCACCATGCTGTTGATCTTGTCGTTCGTCAGC +
Preference number: 6 (lower is better)
Translates to: SGLMGRLGSSRC*CTMLLILSFVS
Trigger: GCTGACGAACGACAAGATCAACAGCATGGTGCAGCAGCACCTGGATGACCCCAGCCTGCCCATCAACCCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS GCA 72 bp GAGAGCGGGTTGATGGGCAGGCTGGGGTCATCCAGGTaGTGCTGCACCATGCTGTTGATCTTGTCGTTCGTC +
Preference number: 6 (lower is better)
Translates to: ESGLMGRLGSSR*CCTMLLILSFV
Trigger: GACGAACGACAAGATCAACAGCATGGTGCAGCAGCACCTGGATGACCCCAGCCTGCCCATCAACCCGCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CCA 72 bp CAAGCTCGACTGCATGCTGAAGCTGAGCTTGGCCCTTaGTGTAACTGGAGGGGGTGTTTGCTGGGAGGACGG +
Preference number: 6 (lower is better)
Translates to: QARLHAEAELGP*CNWRGCLLGGR
Trigger: CCGTCCTCCCAGCAAACACCCCCTCCAGTTACACCAAGGGCCAAGCTCAGCTTCAGCATGCAGTCGAGCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CAA 72 bp AAAGGTCGCCGCAACCCCGAGGTCAGTTTCCTGGTGTaGTTGTCCCTCAGCTCCATGCGACCCACGCGAACA +
Preference number: 6 (lower is better)
Translates to: KGRRNPEVSFLV*LSLSSMRPTRT
Trigger: TGTTCGCGTGGGTCGCATGGAGCTGAGGGACAACAACACCAGGAAACTGACCTCGGGGTTGCGGCGACCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CAA 90 bp AAGGAGTCCTTGCTAATGGTGCAGCTCCCAAGGCTCTGCATGCTCTaGCCGGTGGCCGAGTGGCCCTTTTCTTCCAACTCTGCCTTCGTG +
Preference number: 6 (lower is better)
Translates to: KESLLMVQLPRLCML*PVAEWPFSSNSAFV
Trigger: CACGAAGGCAGAGTTGGAAGAAAAGGGCCACTCGGCCACCGGCAAGAGCATGCAGAGCCTTGGGAGCTGCACCATTAGCAAGGACTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CAA 90 bp GTCAGTTTGGTGGAGCACACGAGCGTGGAGATCTGGAAGGAGTCCTaGCTAATGGTGCAGCTCCCAAGGCTCTGCATGCTCTTGCCGGTG +
Preference number: 6 (lower is better)
Translates to: VSLVEHTSVEIWKES*LMVQLPRLCMLLPV
Trigger: CACCGGCAAGAGCATGCAGAGCCTTGGGAGCTGCACCATTAGCAAGGACTCCTTCCAGATCTCCACGCTCGTGTGCTCCACCAAACTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS TCA 72 bp TTTCCATCAAATTCCCGTAATCTGCCACGCTGCCTTTaGGAGGCAGAGGGGGTGGGACATCGGCCACGTCCG +
Preference number: 6 (lower is better)
Translates to: FPSNSRNLPRCL*EAEGVGHRPRP
Trigger: CGGACGTGGCCGATGTCCCACCCCCTCTGCCTCTCAAAGGCAGCGTGGCAGATTACGGGAATTTGATGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS GCA 72 bp AAGGAGTCCTTGCTAATGGTGCAGCTCCCAAGGCTCTaGATGCTCTTGCCGGTGGCCGAGTGGCCCTTTTCT +
Preference number: 6 (lower is better)
Translates to: KESLLMVQLPRL*MLLPVAEWPFS
Trigger: AGAAAAGGGCCACTCGGCCACCGGCAAGAGCATGCAGAGCCTTGGGAGCTGCACCATTAGCAAGGACTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CCA 72 bp GAGAAGCGCCTTTCGCTTCCAATGACGTTCATCACCTaGCTCTTCGGTCTCTGGGGCCGCAGGGGACTTATC +
Preference number: 6 (lower is better)
Translates to: EKRLSLPMTFIT*LFGLWGRRGLI
Trigger: GATAAGTCCCCTGCGGCCCCAGAGACCGAAGAGCCAGGTGATGAACGTCATTGGAAGCGAAAGGCGCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CAA 72 bp GTGGAGCACACGAGCGTGGAGATCTGGAAGGAGTCCTaGCTAATGGTGCAGCTCCCAAGGCTCTGCATGCTC +
Preference number: 6 (lower is better)
Translates to: VEHTSVEIWKES*LMVQLPRLCML
Trigger: GAGCATGCAGAGCCTTGGGAGCTGCACCATTAGCAAGGACTCCTTCCAGATCTCCACGCTCGTGTGCTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CAA 90 bp CAGGCCTCCATCCTCTCGTGGAACGGCCTCAGTGCCTCCGTGACTTaGTCTCCATGGATTCTGATCCCTTCGGCCAGAAAAGGAATCTGC +
Preference number: 6 (lower is better)
Translates to: QASILSWNGLSASVT*SPWILIPSARKGIC
Trigger: GCAGATTCCTTTTCTGGCCGAAGGGATCAGAATCCATGGAGACAAAGTCACGGAGGCACTGAGGCCGTTCCACGAGAGGATGGAGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS TCA 72 bp GGCTGGGGTCATCCAGGTGCTGCTGCACCATGCTGTTaGTCTTGTCGTTCGTCAGCTGCATGGTCTCAATGG +
Preference number: 6 (lower is better)
Translates to: GWGHPGAAAPCC*SCRSSAAWSQW
Trigger: CCATTGAGACCATGCAGCTGACGAACGACAAGATCAACAGCATGGTGCAGCAGCACCTGGATGACCCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS GCA 72 bp GAAACAGGCCTCCATCCTCTCGTGGAACGGCCTCAGTaGCTCCGTGACTTTGTCTCCATGGATTCTGATCCC +
Preference number: 6 (lower is better)
Translates to: ETGLHPLVERPQ*LRDFVSMDSDP
Trigger: GGGATCAGAATCCATGGAGACAAAGTCACGGAGGCACTGAGGCCGTTCCACGAGAGGATGGAGGCCTGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CCA 72 bp TGGCCGAGTGGCCCTTTTCTTCCAACTCTGCCTTCGTaGAGGGCAGACTCAAGTACGTGGCAGCATCTTCCA +
Preference number: 6 (lower is better)
Translates to: WPSGPFLPTLPS*RADSSTWQHLP
Trigger: TGGAAGATGCTGCCACGTACTTGAGTCTGCCCTCCACGAAGGCAGAGTTGGAAGAAAAGGGCCACTCGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CCA 72 bp TCTCCAGGTCATCCTTGTCCAGCTTGTCCTGGGACCTaGAGTGCATTTTCTTTGGCAGGAGAGGCTCCAGGG +
Preference number: 6 (lower is better)
Translates to: SPGHPCPACPGT*SAFSLAGEAPG
Trigger: CCCTGGAGCCTCTCCTGCCAAAGAAAATGCACTCCAGGTCCCAGGACAAGCTGGACAAGGATGACCTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CCA 72 bp CTTTCATCAGCTGCCTCAAGTTCTGCTGCAGCAGGCTaGTGTTGGAGCGCCATTTCAAGAGCCCCAGAAGGT +
Preference number: 6 (lower is better)
Translates to: LSSAASSSAAAG*CWSAISRAPEG
Trigger: ACCTTCTGGGGCTCTTGAAATGGCGCTCCAACACCAGCCTGCTGCAGCAGAACTTGAGGCAGCTGATGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CCA 72 bp CTTCCAATGACGTTCATCACCTGGCTCTTCGGTCTCTaGGGCCGCAGGGGACTTATCGTTTCCGAAAGGATC +
Preference number: 6 (lower is better)
Translates to: LPMTFITWLFGL*GRRGLIVSERI
Trigger: GATCCTTTCGGAAACGATAAGTCCCCTGCGGCCCCAGAGACCGAAGAGCCAGGTGATGAACGTCATTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CAA 90 bp CCCTTCACCCGGACGGTCTGGTCTGACATGCTGCTCATCATGTCATaGATGGACCTGAAGAGCTGCAGCAAAGATTCCACGAAGTCAGCC +
Preference number: 6 (lower is better)
Translates to: PFTRTVWSDMLLIMS*MDLKSCSKDSTKSA
Trigger: GGCTGACTTCGTGGAATCTTTGCTGCAGCTCTTCAGGTCCATCAATGACATGATGAGCAGCATGTCAGACCAGACCGTCCGGGTGAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS TCA 72 bp TTTCAGTGCTGCCCCCTTCACCCGGACGGTCTGGTCTaGCATGCTGCTCATCATGTCATTGATGGACCTGAA +
Preference number: 6 (lower is better)
Translates to: FQCCPLHPDGLV*HAAHHVIDGPE
Trigger: TTCAGGTCCATCAATGACATGATGAGCAGCATGTCAGACCAGACCGTCCGGGTGAAGGGGGCAGCACTGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS TCA 72 bp ACAGTGCCTAGGGCTGATACAAATATGTGGGTAACATaGGAGCGCAGAGCGACGTCGAGCAGAACCCCTGTG +
Preference number: 6 (lower is better)
Translates to: TVPRADTNMWVT*ERRATSSRTPV
Trigger: CACAGGGGTTCTGCTCGACGTCGCTCTGCGCTCTCATGTTACCCACATATTTGTATCAGCCCTAGGCACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495574.1
CDS CCA 72 bp TCTCATACTGCTCGGCTAGCTCCTTGCCCAAGGCAATaGCCTCCTCCCACATCTTGCCTTTGTCGAAGTAGT +
Preference number: 6 (lower is better)
Translates to: SHTARLAPCPRQ*PPPTSCLCRSS
Trigger: ACTACTTCGACAAAGGCAAGATGTGGGAGGAGGCCATTGCCTTGGGCAAGGAGCTAGCCGAGCAGTATGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CCA 72 bp TGGAACGGCCTCAGTGCCTCCGTGACTTTGTCTCCATaGATTCTGATCCCTTCGGCCAGAAAAGGAATCTGC +
Preference number: 6 (lower is better)
Translates to: WNGLSASVTLSP*ILIPSARKGIC
Trigger: GCAGATTCCTTTTCTGGCCGAAGGGATCAGAATCCATGGAGACAAAGTCACGGAGGCACTGAGGCCGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CAA 72 bp GGGTCATCCAGGTGCTGCTGCACCATGCTGTTGATCTaGTCGTTCGTCAGCTGCATGGTCTCAATGGCATTC +
Preference number: 6 (lower is better)
Translates to: GSSRCCCTMLLI*SFVSCMVSMAF
Trigger: GAATGCCATTGAGACCATGCAGCTGACGAACGACAAGATCAACAGCATGGTGCAGCAGCACCTGGATGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CAA 72 bp ATCCTCTCGTGGAACGGCCTCAGTGCCTCCGTGACTTaGTCTCCATGGATTCTGATCCCTTCGGCCAGAAAA +
Preference number: 6 (lower is better)
Translates to: ILSWNGLSASVT*SPWILIPSARK
Trigger: TTTTCTGGCCGAAGGGATCAGAATCCATGGAGACAAAGTCACGGAGGCACTGAGGCCGTTCCACGAGAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS GCA 72 bp TCCTTGAGCTTCTCGATCTTTTCATGGGCCTCAGGGTaGTCCTGCAGGTACCGGTCTGTAAAGAAGGCCTTT +
Preference number: 6 (lower is better)
Translates to: SLSFSIFSWASG*SCRYRSVKKAF
Trigger: AAAGGCCTTCTTTACAGACCGGTACCTGCAGGAGCACCCTGAGGCCCATGAAAAGATCGAGAAGCTCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CCA 72 bp AAGTATTTCAGTGCTGCCCCCTTCACCCGGACGGTCTaGTCTGACATGCTGCTCATCATGTCATTGATGGAC +
Preference number: 6 (lower is better)
Translates to: KYFSAAPFTRTV*SDMLLIMSLMD
Trigger: GTCCATCAATGACATGATGAGCAGCATGTCAGACCAGACCGTCCGGGTGAAGGGGGCAGCACTGAAATACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CAA 72 bp TCAAACATTTCGTTCTCATACTGCTCGGCTAGCTCCTaGCCCAAGGCAATGGCCTCCTCCCACATCTTGCCT +
Preference number: 6 (lower is better)
Translates to: SNISFSYCSASS*PKAMASSHILP
Trigger: AGGCAAGATGTGGGAGGAGGCCATTGCCTTGGGCAAGGAGCTAGCCGAGCAGTATGAGAACGAAATGTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CAA 72 bp GGAGGGGCCGGCAAGGATCTCGGCTTTCATGGAGCTTaGGAGAGGTTTATTTACAATGATAGAAGGTGCCGC +
Preference number: 6 (lower is better)
Translates to: GGAGKDLGFHGA*ERFIYNDRRCR
Trigger: GCGGCACCTTCTATCATTGTAAATAAACCTCTCCAAAGCTCCATGAAAGCCGAGATCCTTGCCGGCCCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484400.5
CDS CAA 72 bp TCTCCAGGCAACACCACTGTTCCCAGCAGACATGAATaGGGAGCCATAGAAAAGGTGAGAGCCGTTTTCCCC +
Preference number: 6 (lower is better)
Translates to: SPGNTTVPSRHE*GAIEKVRAVFP
Trigger: GGGGAAAACGGCTCTCACCTTTTCTATGGCTCCCAATTCATGTCTGCTGGGAACAGTGGTGTTGCCTGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495574.1
CDS CAA 90 bp GAGCGCACGATGAACTTGAAGATGGATTCTAGCGCTTTCATGGCTTaGTACAGCTGCTCATTTACTCCCGGCTTCTCAGCACCGTCCACG +
Preference number: 6 (lower is better)
Translates to: ERTMNLKMDSSAFMA*YSCSFTPGFSAPST
Trigger: CGTGGACGGTGCTGAGAAGCCGGGAGTAAATGAGCAGCTGTACAAAGCCATGAAAGCGCTAGAATCCATCTTCAAGTTCATCGTGCGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CAA 90 bp TACAGAGCTGGAGGGGCCGGCAAGGATCTCGGCTTTCATGGAGCTTaGGAGAGGTTTATTTACAATGATAGAAGGTGCCGCTTCAGTCCA +
Preference number: 6 (lower is better)
Translates to: YRAGGAGKDLGFHGA*ERFIYNDRRCRFSP
Trigger: TGGACTGAAGCGGCACCTTCTATCATTGTAAATAAACCTCTCCAAAGCTCCATGAAAGCCGAGATCCTTGCCGGCCCCTCCAGCTCTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484400.5
CDS GCA 72 bp AAGATGGATTCTAGCGCTTTCATGGCTTTGTACAGCTaGTCATTTACTCCCGGCTTCTCAGCACCGTCCACG +
Preference number: 6 (lower is better)
Translates to: KMDSSAFMALYS*SFTPGFSAPST
Trigger: CGTGGACGGTGCTGAGAAGCCGGGAGTAAATGAGCAGCTGTACAAAGCCATGAAAGCGCTAGAATCCATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CAA 72 bp GGAACAGCGTTTGCAGAGCATTTTATTGAAGCCAGCTaGGTCTCCAGGCAACACCACTGTTCCCAGCAGACA +
Preference number: 6 (lower is better)
Translates to: GTAFAEHFIEAS*VSRQHHCSQQT
Trigger: TGTCTGCTGGGAACAGTGGTGTTGCCTGGAGACCAAGCTGGCTTCAATAAAATGCTCTGCAAACGCTGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495574.1
CDS CAA 90 bp GGGTGTCCAAACAGGGGAAGGAAACCCATGCAACAATGGTGCTTCTaGATACTGAGTCATGAGCGGTGCATGATGCAAACTGGGGTTACA +
Preference number: 6 (lower is better)
Translates to: GCPNRGRKPMQQWCF*ILSHERCMMQTGVT
Trigger: TGTAACCCCAGTTTGCATCATGCACCGCTCATGACTCAGTATCAAGAAGCACCATTGTTGCATGGGTTTCCTTCCCCTGTTTGGACACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484400.5
CDS TCA 72 bp TTGGTCTCCAGGCAACACCACTGTTCCCAGCAGACATaGATTGGGAGCCATAGAAAAGGTGAGAGCCGTTTT +
Preference number: 6 (lower is better)
Translates to: LVSRQHHCSQQT*IGSHRKGESRF
Trigger: AAAACGGCTCTCACCTTTTCTATGGCTCCCAATTCATGTCTGCTGGGAACAGTGGTGTTGCCTGGAGACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495574.1
CDS GCA 72 bp ATGCTGCTCATCATGTCATTGATGGACCTGAAGAGCTaGAGCAAAGATTCCACGAAGTCAGCCTCTCCCTTG +
Preference number: 6 (lower is better)
Translates to: MLLIMSLMDLKS*SKDSTKSASPL
Trigger: CAAGGGAGAGGCTGACTTCGTGGAATCTTTGCTGCAGCTCTTCAGGTCCATCAATGACATGATGAGCAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS TCA 72 bp CTAATCGTTTCCCATCCTCATCGTACACAGACACCGTaGCCTCCACGTTCTTCGCTGTTGTTTTGCTTCCTT +
Preference number: 6 (lower is better)
Translates to: LIVSHPHRTQTP*PPRSSLLFCFL
Trigger: AAGGAAGCAAAACAACAGCGAAGAACGTGGAGGTCACGGTGTCTGTGTACGATGAGGATGGGAAACGATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS GCA 72 bp TGTCCAAACAGGGGAAGGAAACCCATGCAACAATGGTaGTTCTTGATACTGAGTCATGAGCGGTGCATGATG +
Preference number: 6 (lower is better)
Translates to: CPNRGRKPMQQW*FLILSHERCMM
Trigger: CATCATGCACCGCTCATGACTCAGTATCAAGAAGCACCATTGTTGCATGGGTTTCCTTCCCCTGTTTGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484400.5
CDS CAA 90 bp AACATTTTGCTGAGCTCTTTGGGATCAAACACCAATTTCACATCGTaGACGATCGTTGGTAAGTATTTCAGTGCTGCCCCCTTCACCCGG +
Preference number: 6 (lower is better)
Translates to: NILLSSLGSNTNFTS*TIVGKYFSAAPFTR
Trigger: CCGGGTGAAGGGGGCAGCACTGAAATACTTACCAACGATCGTCAACGATGTGAAATTGGTGTTTGATCCCAAAGAGCTCAGCAAAATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS TCA 72 bp CACAGAATTAGGAACAGCGTTTGCAGAGCATTTTATTaGAGCCAGCTTGGTCTCCAGGCAACACCACTGTTC +
Preference number: 6 (lower is better)
Translates to: HRIRNSVCRAFY*SQLGLQATPLF
Trigger: GAACAGTGGTGTTGCCTGGAGACCAAGCTGGCTTCAATAAAATGCTCTGCAAACGCTGTTCCTAATTCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495574.1
CDS TCA 72 bp ACTTCTTTGGCAGCGATGACTTTGTTTATAACAGTCTaGAGGAAGTCATTCTCCCCTGCCACCCTGGGTGAA +
Preference number: 6 (lower is better)
Translates to: TSLAAMTLFITV*RKSFSPATLGE
Trigger: TTCACCCAGGGTGGCAGGGGAGAATGACTTCCTTCAGACTGTTATAAACAAAGTCATCGCTGCCAAAGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623213.2
CDS GCA 72 bp GGACTTATCGTTTCCGAAAGGATCACAGCCTCAGACTaGTGCAGGGAAATGTCGGTGGGTTTAAATTCTTTC +
Preference number: 6 (lower is better)
Translates to: GLIVSERITASD*CREMSVGLNSF
Trigger: GAAAGAATTTAAACCCACCGACATTTCCCTGCAGCAGTCTGAGGCTGTGATCCTTTCGGAAACGATAAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CAA 72 bp CTGAGCTCTTTGGGATCAAACACCAATTTCACATCGTaGACGATCGTTGGTAAGTATTTCAGTGCTGCCCCC +
Preference number: 6 (lower is better)
Translates to: LSSLGSNTNFTS*TIVGKYFSAAP
Trigger: GGGGGCAGCACTGAAATACTTACCAACGATCGTCAACGATGTGAAATTGGTGTTTGATCCCAAAGAGCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CAA 72 bp CGCCTGGTGGAGATGTTGTCTTCATTTTCTCGGCGTTaGGAAACTGAGTTAAGAGCCGAGCCTCAAAATCTT +
Preference number: 6 (lower is better)
Translates to: RLVEMLSSFSRR*ETELRAEPQNL
Trigger: AAGATTTTGAGGCTCGGCTCTTAACTCAGTTTCCAAACGCCGAGAAAATGAAGACAACATCTCCACCAGGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS GCA 72 bp CTTATCGTTTCCGAAAGGATCACAGCCTCAGACTGCTaGAGGGAAATGTCGGTGGGTTTAAATTCTTTCTCA +
Preference number: 6 (lower is better)
Translates to: LIVSERITASDC*REMSVGLNSFS
Trigger: TGAGAAAGAATTTAAACCCACCGACATTTCCCTGCAGCAGTCTGAGGCTGTGATCCTTTCGGAAACGATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CAA 72 bp ATGAACTTGAAGATGGATTCTAGCGCTTTCATGGCTTaGTACAGCTGCTCATTTACTCCCGGCTTCTCAGCA +
Preference number: 6 (lower is better)
Translates to: MNLKMDSSAFMA*YSCSFTPGFSA
Trigger: TGCTGAGAAGCCGGGAGTAAATGAGCAGCTGTACAAAGCCATGAAAGCGCTAGAATCCATCTTCAAGTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS TCA 72 bp GAGTTCATCCTGAGGCAGAGTTCCAGAAAGAATTTGTaGTCGCCATTCAATAAGGTCATAGATCATGTGCCG +
Preference number: 6 (lower is better)
Translates to: EFILRQSSRKNL*SPFNKVIDHVP
Trigger: CGGCACATGATCTATGACCTTATTGAATGGCGATCACAAATTCTTTCTGGAACTCTGCCTCAGGATGAACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CCA 72 bp TGTCTCCGATCTGTAAAGAAAGTTCATCCGCTCCTCTaGCATCATAGTTATAAAAAGCCACGCCGTACTTCT +
Preference number: 6 (lower is better)
Translates to: CLRSVKKVHPLL*HHSYKKPRRTS
Trigger: AGAAGTACGGCGTGGCTTTTTATAACTATGATGCCAGAGGAGCGGATGAACTTTCTTTACAGATCGGAGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CCA 72 bp ATACTGGCCAGGAGAGTTTTTAATATCGTCGCCTGGTaGAGATGTTGTCTTCATTTTCTCGGCGTTTGGAAA +
Preference number: 6 (lower is better)
Translates to: ILARRVFNIVAW*RCCLHFLGVWK
Trigger: TTTCCAAACGCCGAGAAAATGAAGACAACATCTCCACCAGGCGACGATATTAAAAACTCTCCTGGCCAGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CCA 72 bp AATATACTGGCCAGGAGAGTTTTTAATATCGTCGCCTaGTGGAGATGTTGTCTTCATTTTCTCGGCGTTTGG +
Preference number: 6 (lower is better)
Translates to: NILARRVFNIVA*WRCCLHFLGVW
Trigger: CCAAACGCCGAGAAAATGAAGACAACATCTCCACCAGGCGACGATATTAAAAACTCTCCTGGCCAGTATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS TCA 72 bp TCCGTACTTGTTAAGGATTTTGGCTCTCTTGGCACTTaGAAAATTCTCCAGTTGCAGGGACTCTTGAGTAAG +
Preference number: 6 (lower is better)
Translates to: SVLVKDFGSLGT*KILQLQGLLSK
Trigger: CTTACTCAAGAGTCCCTGCAACTGGAGAATTTTTCAAGTGCCAAGAGAGCCAAAATCCTTAACAAGTACGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CAA 72 bp CCGTCTCGCAGGGTGGTACCATCGTATCTCATCAGCTaGACAAATGCTAGTGCAAATATTTTCTCAGATTTA +
Preference number: 6 (lower is better)
Translates to: PSRRVVPSYLIS*TNASANIFSDL
Trigger: TAAATCTGAGAAAATATTTGCACTAGCATTTGTCAAGCTGATGAGATACGATGGTACCACCCTGCGAGACGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CAA 72 bp CTCATATCTCCGTACTTGTTAAGGATTTTGGCTCTCTaGGCACTTGAAAAATTCTCCAGTTGCAGGGACTCT +
Preference number: 6 (lower is better)
Translates to: LISPYLLRILAL*ALEKFSSCRDS
Trigger: AGAGTCCCTGCAACTGGAGAATTTTTCAAGTGCCAAGAGAGCCAAAATCCTTAACAAGTACGGAGATATGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS CAA 72 bp GTCCATTCAAAGCTCTTGTTAAGGATTTTGGCTCTCTaGGCACTTGAAAAATTCTCCAGTTGCAGGGACTCT +
Preference number: 6 (lower is better)
Translates to: VHSKLLLRILAL*ALEKFSSCRDS
Trigger: AGAGTCCCTGCAACTGGAGAATTTTTCAAGTGCCAAGAGAGCCAAAATCCTTAACAAGAGCTTTGAATGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484400.5
CDS TCA 72 bp TTATCTTGTGTTGACCAAGGTTGTACCACATGTCTCTaGTTTCAAAGCCAATCTGTCTCCTCATATCTCCGT +
Preference number: 6 (lower is better)
Translates to: LSCVDQGCTTCL*FQSQSVSSYLR
Trigger: ACGGAGATATGAGGAGACAGATTGGCTTTGAAATCAGAGACATGTGGTACAACCTTGGTCAACACAAGATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS TCA 72 bp AAAGCTCTTGTTAAGGATTTTGGCTCTCTTGGCACTTaGAAAATTCTCCAGTTGCAGGGACTCTTGAGTAAG +
Preference number: 6 (lower is better)
Translates to: KALVKDFGSLGT*KILQLQGLLSK
Trigger: CTTACTCAAGAGTCCCTGCAACTGGAGAATTTTTCAAGTGCCAAGAGAGCCAAAATCCTTAACAAGAGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484400.5
CDS GCA 72 bp GGAGCTTTGGAGAGGTTTATTTACAATGATAGAAGGTaGCGCTTCAGTCCATTCAAAGCTCTTGTTAAGGAT +
Preference number: 6 (lower is better)
Translates to: GALERFIYNDRR*RFSPFKALVKD
Trigger: ATCCTTAACAAGAGCTTTGAATGGACTGAAGCGGCACCTTCTATCATTGTAAATAAACCTCTCCAAAGCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484400.5
CDS CAA 72 bp AATTTCAATGTTACCCACAAACCCTGCCCCTTGTGGTaGACTTCTTTGGCAGCGATGACTTTGTTTATAACA +
Preference number: 6 (lower is better)
Translates to: NFNVTHKPCPLW*TSLAAMTLFIT
Trigger: TGTTATAAACAAAGTCATCGCTGCCAAAGAAGTCAACCACAAGGGGCAGGGTTTGTGGGTAACATTGAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS GCA 72 bp ATTTTTGAGGTTCACAAACAAGGCCAGAGAAGGGGTTaGAGCAAACTTGGCTTGTCTGTTAATATCTATGTT +
Preference number: 6 (lower is better)
Translates to: IFEVHKQGQRRG*SKLGLSVNIYV
Trigger: AACATAGATATTAACAGACAAGCCAAGTTTGCTGCAACCCCTTCTCTGGCCTTGTTTGTGAACCTCAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS GCA 72 bp AATGACAAACAGAGACTGATGACGTGGCAACACCAATaGAATTTCAGAACTCTTCTCAAAAGGACTTATGAA +
Preference number: 6 (lower is better)
Translates to: NDKQRLMTWQHQ*NFRTLLKRTYE
Trigger: TTCATAAGTCCTTTTGAGAAGAGTTCTGAAATTGCATTGGTGTTGCCACGTCATCAGTCTCTGTTTGTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484400.5
CDS TCA 72 bp TGTAACCTTTCCTCCACTTGTTTAGAAGCTATTTCATaGGCTCTGAAGAGACTAATCGTGCTAGTTAATTCT +
Preference number: 6 (lower is better)
Translates to: CNLSSTCLEAIS*ALKRLIVLVNS
Trigger: AGAATTAACTAGCACGATTAGTCTCTTCAGAGCTCATGAAATAGCTTCTAAACAAGTGGAGGAAAGGTTACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280333.9
ENST00000623213.2
CDS TCA 72 bp AATTTGACAGGTACAGTATTAAGTAAAAACCTTCTCTaGAGTCTTATGGGAAAGGTTGACCACAAAACAGCA +
Preference number: 6 (lower is better)
Translates to: NLTGTVLSKNLL*SLMGKVDHKTA
Trigger: TGCTGTTTTGTGGTCAACCTTTCCCATAAGACTTCAGAGAAGGTTTTTACTTAATACTGTACCTGTCAAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464466.1