RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DNPEP (Homo sapiens)

Ensembl gene IDs: ENSG00000123992

Ensembl transcript IDs: ENST00000273075.9, ENST00000322176.11, ENST00000373963.5, ENST00000373966.5, ENST00000373972.5, ENST00000429013.5, ENST00000430206.5, ENST00000434339.5, ENST00000457935.5, ENST00000460963.5, ENST00000488881.1, ENST00000490371.5, ENST00000519698.1, ENST00000519905.1, ENST00000520694.6, ENST00000521459.5, ENST00000522421.1, ENST00000523282.5, ENST00000523527.5

Found 621 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGCGGCGAGACCGACGTTTCACCCGGAGGCAGGGGCTGTCCGTGTaGGCCCCGATGAGGCTGAAGCCATTGCCAGGAACGTACTGGCCC +
Preference number: 1 (lower is better)
Translates to: LRRDRRFTRRQGLSV*APMRLKPLPGTYWP
Trigger: GGGCCAGTACGTTCCTGGCAATGGCTTCAGCCTCATCGGGGCCCACACGGACAGCCCCTGCCTCCGGGTGAAACGTCGGTCTCGCCGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR GCA 90 bp AGGGTCTGGAGGACTCCTGTGGTGCAGGCCATCTCCCGGATAGAGTaGATGGCCAGTTGGGGGCTGCCTAAATCCAGCACCCGCAGCCCC +
Preference number: 1 (lower is better)
Translates to: RVWRTPVVQAISRIE*MASWGLPKSSTRSP
Trigger: GGGGCTGCGGGTGCTGGATTTAGGCAGCCCCCAACTGGCCATGCACTCTATCCGGGAGATGGCCTGCACCACAGGAGTCCTCCAGACCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR CCA 90 bp ACTCCTGTGGTGCAGGCCATCTCCCGGATAGAGTGCATGGCCAGTTaGGGGCTGCCTAAATCCAGCACCCGCAGCCCCAGCCGAGAAGCC +
Preference number: 1 (lower is better)
Translates to: TPVVQAISRIECMAS*GLPKSSTRSPSREA
Trigger: GGCTTCTCGGCTGGGGCTGCGGGTGCTGGATTTAGGCAGCCCCCAACTGGCCATGCACTCTATCCGGGAGATGGCCTGCACCACAGGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR GCA 90 bp GCCAGGTGTGGGATGCGAAGAATGGGCCGCTCCACGTGCACCAGCTaGTGCTCCAGCCGACCTGAGGTAGGGCACTTGACAATGACGCGT +
Preference number: 1 (lower is better)
Translates to: ARCGMRRMGRSTCTS*CSSRPEVGHLTMTR
Trigger: ACGCGTCATTGTCAAGTGCCCTACCTCAGGTCGGCTGGAGCAGCAGCTGGTGCACGTGGAGCGGCCCATTCTTCGCATCCCACACCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR GCA 90 bp AGGTGTGGGATGCGAAGAATGGGCCGCTCCACGTGCACCAGCTGCTaGTCCAGCCGACCTGAGGTAGGGCACTTGACAATGACGCGTCCA +
Preference number: 1 (lower is better)
Translates to: RCGMRRMGRSTCTSC*SSRPEVGHLTMTRP
Trigger: TGGACGCGTCATTGTCAAGTGCCCTACCTCAGGTCGGCTGGAGCAGCAGCTGGTGCACGTGGAGCGGCCCATTCTTCGCATCCCACACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR GCA 90 bp AGATGGATGGCCAGGTGTGGGATGCGAAGAATGGGCCGCTCCACGTaGACCAGCTGCTGCTCCAGCCGACCTGAGGTAGGGCACTTGACA +
Preference number: 1 (lower is better)
Translates to: RWMARCGMRRMGRST*TSCCSSRPEVGHLT
Trigger: TGTCAAGTGCCCTACCTCAGGTCGGCTGGAGCAGCAGCTGGTGCACGTGGAGCGGCCCATTCTTCGCATCCCACACCTGGCCATCCATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR GCA 90 bp CTGATCATGAAGGACTTGGGTATGGCTTCCTCGAAGGCTGTCGGGTaGTGGCACGAGGCTGAGATCCGCCGCAGCACCAGCTCTGTCAGC +
Preference number: 1 (lower is better)
Translates to: LIMKDLGMASSKAVG*WHEAEIRRSTSSVS
Trigger: GCTGACAGAGCTGGTGCTGCGGCGGATCTCAGCCTCGTGCCAGCACCCGACAGCCTTCGAGGAAGCCATACCCAAGTCCTTCATGATCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR CCA 90 bp ATCATGAAGGACTTGGGTATGGCTTCCTCGAAGGCTGTCGGGTGCTaGCACGAGGCTGAGATCCGCCGCAGCACCAGCTCTGTCAGCAGT +
Preference number: 1 (lower is better)
Translates to: IMKDLGMASSKAVGC*HEAEIRRSTSSVSS
Trigger: ACTGCTGACAGAGCTGGTGCTGCGGCGGATCTCAGCCTCGTGCCAGCACCCGACAGCCTTCGAGGAAGCCATACCCAAGTCCTTCATGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR TCA 90 bp GGGCACAGAAGCAGCTGTGCAGATTGTCCAGCCGAGGAGCAAAGATaGACTCATCATAGGCACCACCCAAGACCGCAGGCTGGGTGTCTG +
Preference number: 1 (lower is better)
Translates to: GHRSSCADCPAEEQR*THHRHHPRPQAGCL
Trigger: CAGACACCCAGCCTGCGGTCTTGGGTGGTGCCTATGATGAGTTCATCTTTGCTCCTCGGCTGGACAATCTGCACAGCTGCTTCTGTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR GCA 90 bp GAGAAACAGCTTTGTCTGCCCAGAGCAGCTCTGAAGGTGGCCCAGTaGAGAACAGGATCTCTGAAGGCAGAGCGGGACACCCATTCTGGG +
Preference number: 1 (lower is better)
Translates to: EKQLCLPRAALKVAQ*RTGSLKAERDTHSG
Trigger: CCCAGAATGGGTGTCCCGCTCTGCCTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAGAGCTGCTCTGGGCAGACAAAGCTGTTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
3UTR CCA 90 bp CCCAAAGTTCTCGTTGATATTTCGCTGCAGATGGATGGCCAGGTGTaGGATGCGAAGAATGGGCCGCTCCACGTGCACCAGCTGCTGCTC +
Preference number: 1 (lower is better)
Translates to: PKVLVDISLQMDGQV*DAKNGPLHVHQLLL
Trigger: GAGCAGCAGCTGGTGCACGTGGAGCGGCCCATTCTTCGCATCCCACACCTGGCCATCCATCTGCAGCGAAATATCAACGAGAACTTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR CCA 90 bp CAGAACAGGATCTCTGAAGGCAGAGCGGGACACCCATTCTGGGGATaGAAAGAGGGAAGACCGTTGAGGCCATTTCCCAGGTGGAGGACT +
Preference number: 1 (lower is better)
Translates to: QNRISEGRAGHPFWG*KEGRPLRPFPRWRT
Trigger: AGTCCTCCACCTGGGAAATGGCCTCAACGGTCTTCCCTCTTTCCATCCCCAGAATGGGTGTCCCGCTCTGCCTTCAGAGATCCTGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
3UTR CCA 90 bp TTCTGGGGATGGAAAGAGGGAAGACCGTTGAGGCCATTTCCCAGGTaGAGGACTAGGGGTGGGAGAAGTGACCTTCTGCTTGAGGATCCA +
Preference number: 1 (lower is better)
Translates to: FWGWKEGRPLRPFPR*RTRGGRSDLLLEDP
Trigger: TGGATCCTCAAGCAGAAGGTCACTTCTCCCACCCCTAGTCCTCCACCTGGGAAATGGCCTCAACGGTCTTCCCTCTTTCCATCCCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
3UTR GCA 90 bp AGATGCATCTCTGTGTTGGGCCCAAAGTTCTCGTTGATATTTCGCTaGAGATGGATGGCCAGGTGTGGGATGCGAAGAATGGGCCGCTCC +
Preference number: 1 (lower is better)
Translates to: RCISVLGPKFSLIFR*RWMARCGMRRMGRS
Trigger: GGAGCGGCCCATTCTTCGCATCCCACACCTGGCCATCCATCTGCAGCGAAATATCAACGAGAACTTTGGGCCCAACACAGAGATGCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR CCA 90 bp TTAATATTCCATTTCTCAGTCTCCTTGAGTTCACTGAAGCCAGCCTaGAGAAGGCGGTTGCGGCATTCAGCCACAGCATGGAAAGGAGAG +
Preference number: 1 (lower is better)
Translates to: LIFHFSVSLSSLKPA*RRRLRHSATAWKGE
Trigger: CTCTCCTTTCCATGCTGTGGCTGAATGCCGCAACCGCCTTCTCCAGGCTGGCTTCAGTGAACTCAAGGAGACTGAGAAATGGAATATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373966.5
ENST00000519698.1
3UTR CCA 90 bp TGGCAGAGAAGTCTTTCCAAGAGGGCTCAATCCACTAAGAGATTATaGCTTAGAGAAGGGAACAGCTCAAAGAAGCCCTTGAAGAGGGTG +
Preference number: 1 (lower is better)
Translates to: WQRSLSKRAQSTKRL*LREGNSSKKPLKRV
Trigger: CACCCTCTTCAAGGGCTTCTTTGAGCTGTTCCCTTCTCTAAGCCATAATCTCTTAGTGGATTGAGCCCTCTTGGAAAGACTTCTCTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR TCA 90 bp AACTCCCACTCCTCTAGTCTCCAAATAAGCGTAGCACGGAGAGTCTaGGTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGA +
Preference number: 1 (lower is better)
Translates to: NSHSSSLQISVARRV*VTIHFNNPASAQLR
Trigger: TCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCACTCAGACTCTCCGTGCTACGCTTATTTGGAGACTAGAGGAGTGGGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
3UTR-3UTR CCA 90 bp TGGGTATGGCTTCCTCGAAGGCTGTCGGGTGCTGGCACGAGGCTGAGATCCGCCTGCTGGAAGCCCACCTaGCTGCGGCGAGACCGACGT +
Preference number: 2 (lower is better)
Translates to: WVWLPRRLSGAGTRLRSACWKPT*LRRDRR
Trigger: ACGTCGGTCTCGCCGCAGCCAGGTGGGCTTCCAGCA...GGCGGATCTCAGCCTCGTGCCAGCACCCGACAGCCTTCGAGGAAGCCATACCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR-3UTR GCA 90 bp TGGGTATGGCTTCCTCGAAGGCTGTCGGGTGCTGGCACGAGGCTGAGATCCGCCTCCACGTGCACCAGCTaGTGCTCCAGCCGACCTGAG +
Preference number: 2 (lower is better)
Translates to: WVWLPRRLSGAGTRLRSASTCTS*CSSRPE
Trigger: CTCAGGTCGGCTGGAGCAGCAGCTGGTGCACGTGGA...GGCGGATCTCAGCCTCGTGCCAGCACCCGACAGCCTTCGAGGAAGCCATACCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR-3UTR CCA 90 bp AGCCCACCTGGCTGCGGCGAGACCGACGTTTCACCCGGAGGCAGGGGCTGTCCGTTGCCAGGAACGTACTaGCCCCCTACAGCAAAAGCT +
Preference number: 2 (lower is better)
Translates to: SPPGCGETDVSPGGRGCPLPGTY*PPTAKA
Trigger: AGCTTTTGCTGTAGGGGGCCAGTACGTTCCTGGCAA...CGGACAGCCCCTGCCTCCGGGTGAAACGTCGGTCTCGCCGCAGCCAGGTGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR-3UTR CCA 90 bp GAGGGTCTGGAGGACTCCTGTGGTGCAGGCCATCTCCCGGATAGAGTGCATGGCCAGGGGCTGTCCGTGTaGGCCCCGATGAGGCTGAAG +
Preference number: 2 (lower is better)
Translates to: EGLEDSCGAGHLPDRVHGQGLSV*APMRLK
Trigger: CTTCAGCCTCATCGGGGCCCACACGGACAGCCCCTG...GCCATGCACTCTATCCGGGAGATGGCCTGCACCACAGGAGTCCTCCAGACCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR-3UTR CCA 90 bp GAGGCTGAGATCCGCCGCAGCACCAGCTCTGTCAGCAGTGACTGTGCTCCCTGTTGCTGGAAGCCCACCTaGCTGCGGCGAGACCGACGT +
Preference number: 2 (lower is better)
Translates to: EAEIRRSTSSVSSDCAPCCWKPT*LRRDRR
Trigger: ACGTCGGTCTCGCCGCAGCCAGGTGGGCTTCCAGCA...ACAGGGAGCACAGTCACTGCTGACAGAGCTGGTGCTGCGGCGGATCTCAGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR-3UTR GCA 90 bp CGCGTCCAGCCAGAGTCAGGTCACGGTCAAACCAGGTGCTCCAGATCCCACCACGGAAGCCCACCTGGCTaGGGCGAGACCGACGTTTCA +
Preference number: 2 (lower is better)
Translates to: RVQPESGHGQTRCSRSHHGSPPG*GETDVS
Trigger: TGAAACGTCGGTCTCGCCGCAGCCAGGTGGGCTTCC...GTGGTGGGATCTGGAGCACCTGGTTTGACCGTGACCTGACTCTGGCTGGACGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR-3UTR CCA 90 bp GCAGATGGATGGCCAGGTGTGGGATGCGAAGAATGGGCCGCTCCACGTGCACCATCCACACCGACTTGCTaGAAGCCCACCTGGCTGCGG +
Preference number: 2 (lower is better)
Translates to: ADGWPGVGCEEWAAPRAPSTPTC*KPTWLR
Trigger: CCGCAGCCAGGTGGGCTTCCAGCAAGTCGGTGTGGA...TGGTGCACGTGGAGCGGCCCATTCTTCGCATCCCACACCTGGCCATCCATCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR-3UTR CCA 90 bp CGCGTCCAGCCAGAGTCAGGTCACGGTCAAACCAGGTGCTCCAGATCCCACCACTCCACACCGACTTGCTaGAAGCCCACCTGGCTGCGG +
Preference number: 2 (lower is better)
Translates to: RVQPESGHGQTRCSRSHHSTPTC*KPTWLR
Trigger: CCGCAGCCAGGTGGGCTTCCAGCAAGTCGGTGTGGA...GTGGTGGGATCTGGAGCACCTGGTTTGACCGTGACCTGACTCTGGCTGGACGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR CAA 90 bp AAACCAGGTGCTCCAGATCCCACCACCATAGGTCTCCACACCGACTaGCTGGAAGCCCACCTGGCTGCGGCGAGACCGACGTTTCACCCG +
Preference number: 2 (lower is better)
Translates to: KPGAPDPTTIGLHTD*LEAHLAAARPTFHP
Trigger: CGGGTGAAACGTCGGTCTCGCCGCAGCCAGGTGGGCTTCCAGCAAGTCGGTGTGGAGACCTATGGTGGTGGGATCTGGAGCACCTGGTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR-3UTR TCA 90 bp AGTGCATGGCCAGTTGGGGGCTGCCTAAATCCAGCACCCGCAGCCCCAGCCGAGCAGCTTCAGCTCAGCTaGGAACTTCCCCTCTCAGGT +
Preference number: 2 (lower is better)
Translates to: SAWPVGGCLNPAPAAPAEQLQLS*ELPLSG
Trigger: ACCTGAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTG...CTCGGCTGGGGCTGCGGGTGCTGGATTTAGGCAGCCCCCAACTGGCCATGCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR-3UTR GCA 90 bp AGGCTGAGATCCGCCGCAGCACCAGCTCTGTCAGCAGTGACTGTGCTCCCTGTGTGGCCAGGTGTGGGATaGGAAGAATGGGCCGCTCCA +
Preference number: 2 (lower is better)
Translates to: RLRSAAAPALSAVTVLPVWPGVG*EEWAAP
Trigger: TGGAGCGGCCCATTCTTCGCATCCCACACCTGGCCA...CACAGGGAGCACAGTCACTGCTGACAGAGCTGGTGCTGCGGCGGATCTCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR-3UTR TCA 90 bp GAGGGTCTGGAGGACTCCTGTGGTGCAGGCCATCTCCCGGATAGAGTGCATGGCTGTCATTCCGGACCATaGGATCCTGCAGGGGGACCT +
Preference number: 2 (lower is better)
Translates to: EGLEDSCGAGHLPDRVHGCHSGP*DPAGGP
Trigger: AGGTCCCCCTGCAGGATCTCATGGTCCGGAATGACA...GCCATGCACTCTATCCGGGAGATGGCCTGCACCACAGGAGTCCTCCAGACCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR-3UTR GCA 90 bp ATCCGCCGCAGCACCAGCTCTGTCAGCAGTGACTGTGCTCCCTGTGCACTCTCAGTCTCCACACCGACTTaGTGGAAGCCCACCTGGCTG +
Preference number: 2 (lower is better)
Translates to: IRRSTSSVSSDCAPCALSVSTPT*WKPTWL
Trigger: CAGCCAGGTGGGCTTCCAGCAAGTCGGTGTGGAGAC...TGAGAGTGCACAGGGAGCACAGTCACTGCTGACAGAGCTGGTGCTGCGGCGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR-3UTR CCA 90 bp GAAGCCCACCTGGCTGCGGCGAGACCGACGTTTCACCCGGAGGCAGGGGCTGTCTCAGGTGCAAAGGGATaGCAGAGAAGTCTTTCCAAG +
Preference number: 2 (lower is better)
Translates to: EAHLAAARPTFHPEAGAVSGAKG*QRSLSK
Trigger: CTTGGAAAGACTTCTCTGCCATCCCTTTGCACCTGA...GACAGCCCCTGCCTCCGGGTGAAACGTCGGTCTCGCCGCAGCCAGGTGGGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR-3UTR CCA 90 bp CTGCAGATGGATGGCCAGGTGTGGGATGCGAAGAATGGGCCGCTCCACGTGCACTCACTGAAGCCAGCCTaGAGAAGGCGGTTGCGGCAT +
Preference number: 2 (lower is better)
Translates to: LQMDGQVWDAKNGPLHVHSLKPA*RRRLRH
Trigger: ATGCCGCAACCGCCTTCTCCAGGCTGGCTTCAGTGA...GTGCACGTGGAGCGGCCCATTCTTCGCATCCCACACCTGGCCATCCATCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373966.5
3UTR-3UTR CCA 90 bp GTTCCACAGGGGGTGTCATTCCGGACCATGAGATCCTGCAGGGGGACCTTGACTCCCAAGACCGCAGGCTaGGTGTCTGCAAGGCAGAGC +
Preference number: 2 (lower is better)
Translates to: VPQGVSFRTMRSCRGTLTPKTAG*VSARQS
Trigger: GCTCTGCCTTGCAGACACCCAGCCTGCGGTCTTGGG...AGTCAAGGTCCCCCTGCAGGATCTCATGGTCCGGAATGACACCCCCTGTGGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR-3UTR CCA 90 bp GCGCTGATCATGAAGGACTTGGGTATGGCTTCCTCGAAGGCTGTCGGGTGCTGGCCCAAGACCGCAGGCTaGGTGTCTGCAAGGCAGAGC +
Preference number: 2 (lower is better)
Translates to: ALIMKDLGMASSKAVGCWPKTAG*VSARQS
Trigger: GCTCTGCCTTGCAGACACCCAGCCTGCGGTCTTGGG...CCAGCACCCGACAGCCTTCGAGGAAGCCATACCCAAGTCCTTCATGATCAGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR-3UTR TCA 90 bp ATGCACAGCATGGGCCATGTCTGCGCTGATCATGAAGGACTTGGGTATGGCTTCGTGCTGGCACGAGGCTaGGATCCGCCGCAGCACCAG +
Preference number: 2 (lower is better)
Translates to: MHSMGHVCADHEGLGYGFVLARG*DPPQHQ
Trigger: CTGGTGCTGCGGCGGATCTCAGCCTCGTGCCAGCAC...GAAGCCATACCCAAGTCCTTCATGATCAGCGCAGACATGGCCCATGCTGTGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR-3UTR GCA 90 bp CAGAGCAGGGACATGAGGACCGAATGGTGCCGCTCATCCACAGCATTGAGAGGCGTCTCCACACCGACTTaGTGGAAGCCCACCTGGCTG +
Preference number: 2 (lower is better)
Translates to: QSRDMRTEWCRSSTALRGVSTPT*WKPTWL
Trigger: CAGCCAGGTGGGCTTCCAGCAAGTCGGTGTGGAGAC...GCCTCTCAATGCTGTGGATGAGCGGCACCATTCGGTCCTCATGTCCCTGCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR-3UTR GCA 90 bp TGGCCAGTTGGGGGCTGCCTAAATCCAGCACCCGCAGCCCCAGCCGAGAAGCCAAGAATGGGGACTAGATaGATCTCTGTGTTGGGCCCA +
Preference number: 2 (lower is better)
Translates to: WPVGGCLNPAPAAPAEKPRMGTR*ISVLGP
Trigger: TGGGCCCAACACAGAGATGCATCTAGTCCCCATTCT...TGGCTTCTCGGCTGGGGCTGCGGGTGCTGGATTTAGGCAGCCCCCAACTGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR-3UTR GCA 90 bp TGGGTATGGCTTCCTCGAAGGCTGTCGGGTGCTGGCACGAGGCTGAGATCCGCCATGAGGACCGAATGGTaGCGCTCATCCACAGCATTG +
Preference number: 2 (lower is better)
Translates to: WVWLPRRLSGAGTRLRSAMRTEW*RSSTAL
Trigger: CAATGCTGTGGATGAGCGGCACCATTCGGTCCTCAT...GGCGGATCTCAGCCTCGTGCCAGCACCCGACAGCCTTCGAGGAAGCCATACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR-3UTR CCA 90 bp GTTCCACAGGGGGTGTCATTCCGGACCATGAGATCCTGCAGGGGGACCTTGACTGTGGGATGCGAAGAATaGGCCGCTCCACGTGCACCA +
Preference number: 2 (lower is better)
Translates to: VPQGVSFRTMRSCRGTLTVGCEE*AAPRAP
Trigger: TGGTGCACGTGGAGCGGCCCATTCTTCGCATCCCAC...AGTCAAGGTCCCCCTGCAGGATCTCATGGTCCGGAATGACACCCCCTGTGGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR CAA 90 bp CATTCAGCCACAGCATGGAAAGGAGAGGGACTCCGGTTCACGAACTaGAGGAGTTCCTTAGCCGCAGTCTGCACCGCCTCTTTGCGGGCC +
Preference number: 2 (lower is better)
Translates to: HSATAWKGEGLRFTN*RSSLAAVCTASLRA
Trigger: GGCCCGCAAAGAGGCGGTGCAGACTGCGGCTAAGGAACTCCTCAAGTTCGTGAACCGGAGTCCCTCTCCTTTCCATGCTGTGGCTGAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373966.5
ENST00000519698.1
3UTR CAA 90 bp TTGGGATGCACAGCATGGGCCATGTCTGCGCTGATCATGAAGGACTaGGGTATGGCTTCCTCGAAGGCTGTCGGGTGCTGGCACGAGGCT +
Preference number: 2 (lower is better)
Translates to: LGCTAWAMSALIMKD*GMASSKAVGCWHEA
Trigger: AGCCTCGTGCCAGCACCCGACAGCCTTCGAGGAAGCCATACCCAAGTCCTTCATGATCAGCGCAGACATGGCCCATGCTGTGCATCCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR-3UTR TCA 90 bp CACCACCCAAGACCGCAGGCTGGGTGTCTGCAAGGCAGAGCTCCATCTCCACTACAGCTTCAGCTCAGCTaGGAACTTCCCCTCTCAGGT +
Preference number: 2 (lower is better)
Translates to: HHPRPQAGCLQGRAPSPLQLQLS*ELPLSG
Trigger: ACCTGAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTG...TAGTGGAGATGGAGCTCTGCCTTGCAGACACCCAGCCTGCGGTCTTGGGTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR-3UTR TCA 90 bp AGGCAGAGCGGGACACCCATTCTGGGGATGGAAAGAGGGAAGACCGTTGAGGCCCAGCTTCAGCTCAGCTaGGAACTTCCCCTCTCAGGT +
Preference number: 2 (lower is better)
Translates to: RQSGTPILGMERGKTVEAQLQLS*ELPLSG
Trigger: ACCTGAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTG...GGCCTCAACGGTCTTCCCTCTTTCCATCCCCAGAATGGGTGTCCCGCTCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
3UTR-3UTR GCA 90 bp ACTCCTGTGGTGCAGGCCATCTCCCGGATAGAGTGCATGGCCAGTTGGGGGCTGGAATCTATCAAGGCCTaGAGGGCACAGAAGCAGCTG +
Preference number: 2 (lower is better)
Translates to: TPVVQAISRIECMASWGLESIKA*RAQKQL
Trigger: CAGCTGCTTCTGTGCCCTGCAGGCCTTGATAGATTC...CAGCCCCCAACTGGCCATGCACTCTATCCGGGAGATGGCCTGCACCACAGGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR-3UTR GCA 90 bp GAGGCTGAGATCCGCCGCAGCACCAGCTCTGTCAGCAGTGACTGTGCTCCCTGTGAATCTATCAAGGCCTaGAGGGCACAGAAGCAGCTG +
Preference number: 2 (lower is better)
Translates to: EAEIRRSTSSVSSDCAPCESIKA*RAQKQL
Trigger: CAGCTGCTTCTGTGCCCTGCAGGCCTTGATAGATTC...ACAGGGAGCACAGTCACTGCTGACAGAGCTGGTGCTGCGGCGGATCTCAGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR-3UTR CCA 90 bp GCTGCAGATGGATGGCCAGGTGTGGGATGCGAAGAATGGGCCGCTCCACGTGCATTGCCAGGAACGTACTaGCCCCCTACAGCAAAAGCT +
Preference number: 2 (lower is better)
Translates to: AADGWPGVGCEEWAAPRALPGTY*PPTAKA
Trigger: AGCTTTTGCTGTAGGGGGCCAGTACGTTCCTGGCAA...TGCACGTGGAGCGGCCCATTCTTCGCATCCCACACCTGGCCATCCATCTGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR-3UTR TCA 90 bp ATCCGCCGCAGCACCAGCTCTGTCAGCAGTGACTGTGCTCCCTGTGCACTCTCAAGGAGTTCCTGGTCATaGAGTACTTGCTCTCGGGCT +
Preference number: 2 (lower is better)
Translates to: IRRSTSSVSSDCAPCALSRSSWS*STCSRA
Trigger: AGCCCGAGAGCAAGTACTTCATGACCAGGAACTCCT...TGAGAGTGCACAGGGAGCACAGTCACTGCTGACAGAGCTGGTGCTGCGGCGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR-3UTR TCA 90 bp CTGATCATGAAGGACTTGGGTATGGCTTCCTCGAAGGCTGTCGGGTGCTGGCACCTGCTCCAGCCGACCTaGGGTAGGGCACTTGACAAT +
Preference number: 2 (lower is better)
Translates to: LIMKDLGMASSKAVGCWHLLQPT*GRALDN
Trigger: ATTGTCAAGTGCCCTACCTCAGGTCGGCTGGAGCAG...GTGCCAGCACCCGACAGCCTTCGAGGAAGCCATACCCAAGTCCTTCATGATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR-3UTR GCA 90 bp ATCATAGGCACCACCCAAGACCGCAGGCTGGGTGTCTGCAAGGCAGAGCTCCATCACGGTCAAACCAGGTaGTCCAGATCCCACCACCAT +
Preference number: 2 (lower is better)
Translates to: IIGTTQDRRLGVCKAELHHGQTR*SRSHHH
Trigger: ATGGTGGTGGGATCTGGAGCACCTGGTTTGACCGTG...ATGGAGCTCTGCCTTGCAGACACCCAGCCTGCGGTCTTGGGTGGTGCCTATGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR-3UTR CCA 90 bp CTTTGTCTGCCCAGAGCAGCTCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGAGGCCATTTCCCAGGTaGAGGACTAGGGGTGGGAGA +
Preference number: 2 (lower is better)
Translates to: LCLPRAALKVAQCRTGSLRPFPR*RTRGGR
Trigger: TCTCCCACCCCTAGTCCTCCACCTGGGAAATGGCCT...CAGAGATCCTGTTCTGCACTGGGCCACCTTCAGAGCTGCTCTGGGCAGACAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
3UTR-3UTR TCA 90 bp TGGAGGACTAGGGGTGGGAGAAGTGACCTTCTGCTTGAGGATCCAGTCCACCCTCAGCTTCAGCTCAGCTaGGAACTTCCCCTCTCAGGT +
Preference number: 2 (lower is better)
Translates to: WRTRGGRSDLLLEDPVHPQLQLS*ELPLSG
Trigger: ACCTGAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTG...AGGGTGGACTGGATCCTCAAGCAGAAGGTCACTTCTCCCACCCCTAGTCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
3UTR-3UTR GCA 90 bp AGCAGCTCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGAAGGCAGAGCGGGAGGAGAAGTGACCTTCTaGTTGAGGATCCAGTCCACC +
Preference number: 2 (lower is better)
Translates to: SSSEGGPVQNRISEGRAGGEVTF*LRIQST
Trigger: GGTGGACTGGATCCTCAAGCAGAAGGTCACTTCTCC...TCCCGCTCTGCCTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAGAGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
3UTR-3UTR GCA 90 bp CTGAGATCCGCCGCAGCACCAGCTCTGTCAGCAGTGACTGTGCTCCCTGTGCACTCGTTGATATTTCGCTaGAGATGGATGGCCAGGTGT +
Preference number: 2 (lower is better)
Translates to: LRSAAAPALSAVTVLPVHSLIFR*RWMARC
Trigger: ACACCTGGCCATCCATCTGCAGCGAAATATCAACGA...GTGCACAGGGAGCACAGTCACTGCTGACAGAGCTGGTGCTGCGGCGGATCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR-3UTR CCA 90 bp GCAGATGGATGGCCAGGTGTGGGATGCGAAGAATGGGCCGCTCCACGTGCACCATCAGGTGCAAAGGGATaGCAGAGAAGTCTTTCCAAG +
Preference number: 2 (lower is better)
Translates to: ADGWPGVGCEEWAAPRAPSGAKG*QRSLSK
Trigger: CTTGGAAAGACTTCTCTGCCATCCCTTTGCACCTGA...TGGTGCACGTGGAGCGGCCCATTCTTCGCATCCCACACCTGGCCATCCATCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR-3UTR CCA 90 bp AGCAGCTCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGAAGGCAGAGCGGGACACCCATTCTGGGGATaGAAAGAGGGAAGACCGTTG +
Preference number: 2 (lower is better)
Translates to: SSSEGGPVQNRISEGRAGHPFWG*KEGRPL
Trigger: CAACGGTCTTCCCTCTTTCCATCCCCAGAATGGGTG...TCCCGCTCTGCCTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAGAGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
3UTR-3UTR CCA 90 bp TCTGCCCAGAGCAGCTCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGAAGGCCACCCATTCTGGGGATaGAAAGAGGGAAGACCGTTG +
Preference number: 2 (lower is better)
Translates to: SAQSSSEGGPVQNRISEGHPFWG*KEGRPL
Trigger: CAACGGTCTTCCCTCTTTCCATCCCCAGAATGGGTG...GCCTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAGAGCTGCTCTGGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
3UTR-3UTR GCA 90 bp ATGCACAGCATGGGCCATGTCTGCGCTGATCATGAAGGACTTGGGTATGGCTTCCAGGGAGCCAGGGCCTaGACAGGAATCTATCAAGGC +
Preference number: 2 (lower is better)
Translates to: MHSMGHVCADHEGLGYGFQGARA*TGIYQG
Trigger: GCCTTGATAGATTCCTGTGCAGGCCCTGGCTCCCTG...GAAGCCATACCCAAGTCCTTCATGATCAGCGCAGACATGGCCCATGCTGTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR-3UTR CCA 90 bp CTGATCATGAAGGACTTGGGTATGGCTTCCTCGAAGGCTGTCGGGTGCTGGCACCCTCCTGGATGGCTGTaGCAAGAATGGGGACTAGAT +
Preference number: 2 (lower is better)
Translates to: LIMKDLGMASSKAVGCWHPPGWL*QEWGLD
Trigger: ATCTAGTCCCCATTCTTGCCACAGCCATCCAGGAGG...GTGCCAGCACCCGACAGCCTTCGAGGAAGCCATACCCAAGTCCTTCATGATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR-3UTR GCA 90 bp CTGTGCACTCTCAGACCCCACCTCTTCGTTGTCATAGAGTGTGACCATGCGCACATGAGGACCGAATGGTaGCGCTCATCCACAGCATTG +
Preference number: 2 (lower is better)
Translates to: LCTLRPHLFVVIECDHAHMRTEW*RSSTAL
Trigger: CAATGCTGTGGATGAGCGGCACCATTCGGTCCTCAT...GTGCGCATGGTCACACTCTATGACAACGAAGAGGTGGGGTCTGAGAGTGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR-3UTR TCA 90 bp AGGCAGAGCGGGACACCCATTCTGGGGATGGAAAGAGGGAAGACCGTTGAGGCCCACGGAGAGTCTGAGTaGCAATCCACTTTAATAATC +
Preference number: 2 (lower is better)
Translates to: RQSGTPILGMERGKTVEAHGESE*QSTLII
Trigger: GATTATTAAAGTGGATTGTCACTCAGACTCTCCGTG...GGCCTCAACGGTCTTCCCTCTTTCCATCCCCAGAATGGGTGTCCCGCTCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
3UTR-3UTR GCA 90 bp AGATTATGGCTTAGAGAAGGGAACAGCTCAAAGAAGCCCTTGAAGAGGGTGAGGTGGCCAGGTGTGGGATaGGAAGAATGGGCCGCTCCA +
Preference number: 2 (lower is better)
Translates to: RLWLREGNSSKKPLKRVRWPGVG*EEWAAP
Trigger: TGGAGCGGCCCATTCTTCGCATCCCACACCTGGCCA...CCTCACCCTCTTCAAGGGCTTCTTTGAGCTGTTCCCTTCTCTAAGCCATAATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR-3UTR GCA 90 bp CACCTCTTCGTTGTCATAGAGTGTGACCATGCGCACGTGAGGCTCTGTGGCCAGTCGTTGATATTTCGCTaGAGATGGATGGCCAGGTGT +
Preference number: 2 (lower is better)
Translates to: HLFVVIECDHAHVRLCGQSLIFR*RWMARC
Trigger: ACACCTGGCCATCCATCTGCAGCGAAATATCAACGA...CTGGCCACAGAGCCTCACGTGCGCATGGTCACACTCTATGACAACGAAGAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR-3UTR CCA 90 bp GGACTAGGGGTGGGAGAAGTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCACTCAGGTGCAAAGGGATaGCAGAGAAGTCTTTCCAAG +
Preference number: 2 (lower is better)
Translates to: GLGVGEVTFCLRIQSTLHSGAKG*QRSLSK
Trigger: CTTGGAAAGACTTCTCTGCCATCCCTTTGCACCTGA...GTGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCACTTCTCCCACCCCTAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
3UTR-3UTR TCA 90 bp TGTCTGCCCAGAGCAGCTCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGAAGGTAGCACGGAGAGTCTaGGTGACAATCCACTTTAAT +
Preference number: 2 (lower is better)
Translates to: CLPRAALKVAQCRTGSLKVARRV*VTIHFN
Trigger: ATTAAAGTGGATTGTCACTCAGACTCTCCGTGCTAC...CTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAGAGCTGCTCTGGGCAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
3UTR-3UTR TCA 90 bp CTTTGTCTGCCCAGAGCAGCTCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGGTAGCACGGAGAGTCTaGGTGACAATCCACTTTAAT +
Preference number: 2 (lower is better)
Translates to: LCLPRAALKVAQCRTGSLVARRV*VTIHFN
Trigger: ATTAAAGTGGATTGTCACTCAGACTCTCCGTGCTAC...CAGAGATCCTGTTCTGCACTGGGCCACCTTCAGAGCTGCTCTGGGCAGACAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
3UTR CAA 90 bp ATGAAGTACTTGCTCTCGGGCTTAATATTCCATTTCTCAGTCTCCTaGAGTTCACTGAAGCCAGCCTGGAGAAGGCGGTTGCGGCATTCA +
Preference number: 2 (lower is better)
Translates to: MKYLLSGLIFHFSVS*SSLKPAWRRRLRHS
Trigger: TGAATGCCGCAACCGCCTTCTCCAGGCTGGCTTCAGTGAACTCAAGGAGACTGAGAAATGGAATATTAAGCCCGAGAGCAAGTACTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373966.5
ENST00000519698.1
3UTR-3UTR TCA 90 bp TATAATGTTTTGAAGGTACTCCTTGTCCTGTGTCCAGTTCTGCAACCTGCCTTTAGCCTCCGGAGTGGCTaGGATTACAGGCATGTGCCA +
Preference number: 2 (lower is better)
Translates to: YNVLKVLLVLCPVLQPAFSLRSG*DYRHVP
Trigger: TGGCACATGCCTGTAATCTCAGCCACTCCGGAGGCT...AAAGGCAGGTTGCAGAACTGGACACAGGACAAGGAGTACCTTCAAAACATTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273075.9
3UTR-3UTR TCA 90 bp TATAATGTTTTGAAGGTACTCCTTGTCCTGTGTCCAGTTCTGCAACCTGCCTTTAAGAGGGAAGACCGTTaGGGCCATTTCCCAGGTGGA +
Preference number: 2 (lower is better)
Translates to: YNVLKVLLVLCPVLQPAFKREDR*GHFPGG
Trigger: TCCACCTGGGAAATGGCCTCAACGGTCTTCCCTCTT...AAAGGCAGGTTGCAGAACTGGACACAGGACAAGGAGTACCTTCAAAACATTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273075.9
3UTR-3UTR TCA 90 bp TATAATGTTTTGAAGGTACTCCTTGTCCTGTGTCCAGTTCTGCAACCTGCCTTTTGGCAAGGCTGGTCTTaGACTCTGACCTCAAGTGAT +
Preference number: 2 (lower is better)
Translates to: YNVLKVLLVLCPVLQPAFWQGWS*TLTSSD
Trigger: ATCACTTGAGGTCAGAGTTCAAGACCAGCCTTGCCA...AAAGGCAGGTTGCAGAACTGGACACAGGACAAGGAGTACCTTCAAAACATTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273075.9
3UTR-3UTR CCA 90 bp TATAATGTTTTGAAGGTACTCCTTGTCCTGTGTCCAGTTCTGCAACCTGCCTTTTCAGGTGCAAAGGGATaGCAGAGAAGTCTTTCCAAG +
Preference number: 2 (lower is better)
Translates to: YNVLKVLLVLCPVLQPAFSGAKG*QRSLSK
Trigger: CTTGGAAAGACTTCTCTGCCATCCCTTTGCACCTGA...AAAGGCAGGTTGCAGAACTGGACACAGGACAAGGAGTACCTTCAAAACATTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273075.9
3UTR-3UTR GCA 90 bp TATAATGTTTTGAAGGTACTCCTTGTCCTGTGTCCAGTTCTGCAACCTGCCTTTGGAAGGACACCAGTTTaGACAATTATTTTAGTGGAA +
Preference number: 2 (lower is better)
Translates to: YNVLKVLLVLCPVLQPAFGRTPV*TIILVE
Trigger: TTCCACTAAAATAATTGTGCAAACTGGTGTCCTTCC...AAAGGCAGGTTGCAGAACTGGACACAGGACAAGGAGTACCTTCAAAACATTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273075.9
3UTR CCA 72 bp GACCGACGTTTCACCCGGAGGCAGGGGCTGTCCGTGTaGGCCCCGATGAGGCTGAAGCCATTGCCAGGAACG +
Preference number: 3 (lower is better)
Translates to: DRRFTRRQGLSV*APMRLKPLPGT
Trigger: CGTTCCTGGCAATGGCTTCAGCCTCATCGGGGCCCACACGGACAGCCCCTGCCTCCGGGTGAAACGTCGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR TCA 72 bp CCGCTCCACGTGCACCAGCTGCTGCTCCAGCCGACCTaGGGTAGGGCACTTGACAATGACGCGTCCAGCCAG +
Preference number: 3 (lower is better)
Translates to: PLHVHQLLLQPT*GRALDNDASSQ
Trigger: CTGGCTGGACGCGTCATTGTCAAGTGCCCTACCTCAGGTCGGCTGGAGCAGCAGCTGGTGCACGTGGAGCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR CCA 72 bp GCTGCAGATGGATGGCCAGGTGTGGGATGCGAAGAATaGGCCGCTCCACGTGCACCAGCTGCTGCTCCAGCC +
Preference number: 3 (lower is better)
Translates to: AADGWPGVGCEE*AAPRAPAAAPA
Trigger: GGCTGGAGCAGCAGCTGGTGCACGTGGAGCGGCCCATTCTTCGCATCCCACACCTGGCCATCCATCTGCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR CCA 72 bp GTGCAGGCCATCTCCCGGATAGAGTGCATGGCCAGTTaGGGGCTGCCTAAATCCAGCACCCGCAGCCCCAGC +
Preference number: 3 (lower is better)
Translates to: VQAISRIECMAS*GLPKSSTRSPS
Trigger: GCTGGGGCTGCGGGTGCTGGATTTAGGCAGCCCCCAACTGGCCATGCACTCTATCCGGGAGATGGCCTGCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR-3UTR CAA 90 bp TCGGGTGCTGGCACGAGGCTGAGATCCGCCGCAGCACCAGCTCTGTCAGCAGTGGTCTGCACCGCCTCTTaGCGGGCCTTACCGTTCATG +
Preference number: 3 (lower is better)
Translates to: SGAGTRLRSAAAPALSAVVCTAS*RALPFM
Trigger: CATGAACGGTAAGGCCCGCAAAGAGGCGGTGCAGAC...CACTGCTGACAGAGCTGGTGCTGCGGCGGATCTCAGCCTCGTGCCAGCACCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373966.5
3UTR GCA 72 bp GGGATGCGAAGAATGGGCCGCTCCACGTGCACCAGCTaGTGCTCCAGCCGACCTGAGGTAGGGCACTTGACA +
Preference number: 3 (lower is better)
Translates to: GMRRMGRSTCTS*CSSRPEVGHLT
Trigger: TGTCAAGTGCCCTACCTCAGGTCGGCTGGAGCAGCAGCTGGTGCACGTGGAGCGGCCCATTCTTCGCATCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR GCA 72 bp AAGGACTTGGGTATGGCTTCCTCGAAGGCTGTCGGGTaGTGGCACGAGGCTGAGATCCGCCGCAGCACCAGC +
Preference number: 3 (lower is better)
Translates to: KDLGMASSKAVG*WHEAEIRRSTS
Trigger: GCTGGTGCTGCGGCGGATCTCAGCCTCGTGCCAGCACCCGACAGCCTTCGAGGAAGCCATACCCAAGTCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR CCA 72 bp GACTTGGGTATGGCTTCCTCGAAGGCTGTCGGGTGCTaGCACGAGGCTGAGATCCGCCGCAGCACCAGCTCT +
Preference number: 3 (lower is better)
Translates to: DLGMASSKAVGC*HEAEIRRSTSS
Trigger: AGAGCTGGTGCTGCGGCGGATCTCAGCCTCGTGCCAGCACCCGACAGCCTTCGAGGAAGCCATACCCAAGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR-3UTR CAA 90 bp ATAGGCACCACCCAAGACCGCAGGCTGGGTGTCTGCAAGGCAGAGCTCCATCTCGGTCTCCACACCGACTaGCTGGAAGCCCACCTGGCT +
Preference number: 3 (lower is better)
Translates to: IGTTQDRRLGVCKAELHLGLHTD*LEAHLA
Trigger: AGCCAGGTGGGCTTCCAGCAAGTCGGTGTGGAGACC...GAGATGGAGCTCTGCCTTGCAGACACCCAGCCTGCGGTCTTGGGTGGTGCCTAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR-3UTR CAA 90 bp CTGCAGATGGATGGCCAGGTGTGGGATGCGAAGAATGGGCCGCTCCACGTGCACATGAGGCTGAAGCCATaGCCAGGAACGTACTGGCCC +
Preference number: 3 (lower is better)
Translates to: LQMDGQVWDAKNGPLHVHMRLKP*PGTYWP
Trigger: GGGCCAGTACGTTCCTGGCAATGGCTTCAGCCTCAT...GTGCACGTGGAGCGGCCCATTCTTCGCATCCCACACCTGGCCATCCATCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR GCA 72 bp CGCGTCCAGCCAGAGTCAGGTCACGGTCAAACCAGGTaGTCCAGATCCCACCACCATAGGTCTCCACACCGA +
Preference number: 3 (lower is better)
Translates to: RVQPESGHGQTR*SRSHHHRSPHR
Trigger: TCGGTGTGGAGACCTATGGTGGTGGGATCTGGAGCACCTGGTTTGACCGTGACCTGACTCTGGCTGGACGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR GCA 72 bp ATGCGAAGAATGGGCCGCTCCACGTGCACCAGCTGCTaGTCCAGCCGACCTGAGGTAGGGCACTTGACAATG +
Preference number: 3 (lower is better)
Translates to: MRRMGRSTCTSC*SSRPEVGHLTM
Trigger: CATTGTCAAGTGCCCTACCTCAGGTCGGCTGGAGCAGCAGCTGGTGCACGTGGAGCGGCCCATTCTTCGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR GCA 72 bp AGGACTCCTGTGGTGCAGGCCATCTCCCGGATAGAGTaGATGGCCAGTTGGGGGCTGCCTAAATCCAGCACC +
Preference number: 3 (lower is better)
Translates to: RTPVVQAISRIE*MASWGLPKSST
Trigger: GGTGCTGGATTTAGGCAGCCCCCAACTGGCCATGCACTCTATCCGGGAGATGGCCTGCACCACAGGAGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR-3UTR CAA 90 bp ACTCCTGTGGTGCAGGCCATCTCCCGGATAGAGTGCATGGCCAGTTGGGGGCTGAAGCAGCTGTGCAGATaGTCCAGCCGAGGAGCAAAG +
Preference number: 3 (lower is better)
Translates to: TPVVQAISRIECMASWGLKQLCR*SSRGAK
Trigger: CTTTGCTCCTCGGCTGGACAATCTGCACAGCTGCTT...CAGCCCCCAACTGGCCATGCACTCTATCCGGGAGATGGCCTGCACCACAGGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR TCA 72 bp CACTCTCAGACCCCACCTCTTCGTTGTCATAGAGTGTaGCCATGCGCACGTGAGGCTCTGTGGCCAGGGAGC +
Preference number: 3 (lower is better)
Translates to: HSQTPPLRCHRV*PCAREALWPGS
Trigger: GCTCCCTGGCCACAGAGCCTCACGTGCGCATGGTCACACTCTATGACAACGAAGAGGTGGGGTCTGAGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR GCA 72 bp CTTTGTCTGCCCAGAGCAGCTCTGAAGGTGGCCCAGTaGAGAACAGGATCTCTGAAGGCAGAGCGGGACACC +
Preference number: 3 (lower is better)
Translates to: LCLPRAALKVAQ*RTGSLKAERDT
Trigger: GGTGTCCCGCTCTGCCTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAGAGCTGCTCTGGGCAGACAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
3UTR GCA 72 bp CGGTTCACGAACTTGAGGAGTTCCTTAGCCGCAGTCTaGACCGCCTCTTTGCGGGCCTTACCGTTCATGGCC +
Preference number: 3 (lower is better)
Translates to: RFTNLRSSLAAV*TASLRALPFMA
Trigger: GGCCATGAACGGTAAGGCCCGCAAAGAGGCGGTGCAGACTGCGGCTAAGGAACTCCTCAAGTTCGTGAACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373966.5
3UTR-3UTR CAA 90 bp ATGGGCACAGAGCAGGGACATGAGGACCGAATGGTGCCGCTCATCCACAGCATTCCTGAGGTAGGGCACTaGACAATGACGCGTCCAGCC +
Preference number: 3 (lower is better)
Translates to: MGTEQGHEDRMVPLIHSIPEVGH*TMTRPA
Trigger: GGCTGGACGCGTCATTGTCAAGTGCCCTACCTCAGG...AATGCTGTGGATGAGCGGCACCATTCGGTCCTCATGTCCCTGCTCTGTGCCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR-3UTR CAA 90 bp TCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGAAGGCAGAGCGGGACACCCAAAAGAGGGAAGACCGTaGAGGCCATTTCCCAGGTGG +
Preference number: 3 (lower is better)
Translates to: SEGGPVQNRISEGRAGHPKEGRP*RPFPRW
Trigger: CCACCTGGGAAATGGCCTCAACGGTCTTCCCTCTTT...TGGGTGTCCCGCTCTGCCTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
3UTR-3UTR CAA 90 bp GAAGCCATTGCCAGGAACGTACTGGCCCCCTACAGCAAAAGCTATGATGGTGGAGCTTTCGGTTTCGCTTaGGGTCAGGCGGCCCCACTG +
Preference number: 3 (lower is better)
Translates to: EAIARNVLAPYSKSYDGGAFGFA*GQAAPL
Trigger: CAGTGGGGCCGCCTGACCCAAAGCGAAACCGAAAGC...TCCACCATCATAGCTTTTGCTGTAGGGGGCCAGTACGTTCCTGGCAATGGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373966.5
3UTR GCA 72 bp ATCATAGGCACCACCCAAGACCGCAGGCTGGGTGTCTaGAAGGCAGAGCTCCATCTCCACTATGTCCTTGGG +
Preference number: 3 (lower is better)
Translates to: IIGTTQDRRLGV*KAELHLHYVLG
Trigger: CCCAAGGACATAGTGGAGATGGAGCTCTGCCTTGCAGACACCCAGCCTGCGGTCTTGGGTGGTGCCTATGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR CCA 72 bp CTCGTTGATATTTCGCTGCAGATGGATGGCCAGGTGTaGGATGCGAAGAATGGGCCGCTCCACGTGCACCAG +
Preference number: 3 (lower is better)
Translates to: LVDISLQMDGQV*DAKNGPLHVHQ
Trigger: CTGGTGCACGTGGAGCGGCCCATTCTTCGCATCCCACACCTGGCCATCCATCTGCAGCGAAATATCAACGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR-3UTR CAA 90 bp GAAGGCAGAGCGGGACACCCATTCTGGGGATGGAAAGAGGGAAGACCGTTGAGGGAAGTGACCTTCTGCTaGAGGATCCAGTCCACCCTT +
Preference number: 3 (lower is better)
Translates to: EGRAGHPFWGWKEGRPLREVTFC*RIQSTL
Trigger: AAGGGTGGACTGGATCCTCAAGCAGAAGGTCACTTC...CCTCAACGGTCTTCCCTCTTTCCATCCCCAGAATGGGTGTCCCGCTCTGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
3UTR-3UTR CAA 90 bp AGGAGCAAAGATGAACTCATCATAGGCACCACCCAAGACCGCAGGCTGGGTGTCATGAGGCTGAAGCCATaGCCAGGAACGTACTGGCCC +
Preference number: 3 (lower is better)
Translates to: RSKDELIIGTTQDRRLGVMRLKP*PGTYWP
Trigger: GGGCCAGTACGTTCCTGGCAATGGCTTCAGCCTCAT...GACACCCAGCCTGCGGTCTTGGGTGGTGCCTATGATGAGTTCATCTTTGCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR CCA 72 bp AACAGCTCAAAGAAGCCCTTGAAGAGGGTGAGGGTCTaGAGGACTCCTGTGGTGCAGGCCATCTCCCGGATA +
Preference number: 3 (lower is better)
Translates to: NSSKKPLKRVRV*RTPVVQAISRI
Trigger: TATCCGGGAGATGGCCTGCACCACAGGAGTCCTCCAGACCCTCACCCTCTTCAAGGGCTTCTTTGAGCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR-3UTR CAA 90 bp AAAGTTCTCGTTGATATTTCGCTGCAGATGGATGGCCAGGTGTGGGATGCGAAGGCCTGGAGAAGGCGGTaGCGGCATTCAGCCACAGCA +
Preference number: 3 (lower is better)
Translates to: KVLVDISLQMDGQVWDAKAWRRR*RHSATA
Trigger: TGCTGTGGCTGAATGCCGCAACCGCCTTCTCCAGGC...CTTCGCATCCCACACCTGGCCATCCATCTGCAGCGAAATATCAACGAGAACTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373966.5
3UTR-3UTR CAA 90 bp GCTGCAGATGGATGGCCAGGTGTGGGATGCGAAGAATGGGCCGCTCCACGTGCACTGGTCATGAAGTACTaGCTCTCGGGCTTAATATTC +
Preference number: 3 (lower is better)
Translates to: AADGWPGVGCEEWAAPRALVMKY*LSGLIF
Trigger: GAATATTAAGCCCGAGAGCAAGTACTTCATGACCAG...TGCACGTGGAGCGGCCCATTCTTCGCATCCCACACCTGGCCATCCATCTGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR CCA 72 bp CATTTCTCAGTCTCCTTGAGTTCACTGAAGCCAGCCTaGAGAAGGCGGTTGCGGCATTCAGCCACAGCATGG +
Preference number: 3 (lower is better)
Translates to: HFSVSLSSLKPA*RRRLRHSATAW
Trigger: CCATGCTGTGGCTGAATGCCGCAACCGCCTTCTCCAGGCTGGCTTCAGTGAACTCAAGGAGACTGAGAAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373966.5
ENST00000519698.1
3UTR-3UTR CAA 90 bp AGATTATGGCTTAGAGAAGGGAACAGCTCAAAGAAGCCCTTGAAGAGGGTGAGGCGCTCATCCACAGCATaGAGAGGCCCTGGCTCAGGA +
Preference number: 3 (lower is better)
Translates to: RLWLREGNSSKKPLKRVRRSSTA*RGPGSG
Trigger: TCCTGAGCCAGGGCCTCTCAATGCTGTGGATGAGCG...CCTCACCCTCTTCAAGGGCTTCTTTGAGCTGTTCCCTTCTCTAAGCCATAATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR GCA 72 bp TCTGTGTTGGGCCCAAAGTTCTCGTTGATATTTCGCTaGAGATGGATGGCCAGGTGTGGGATGCGAAGAATG +
Preference number: 3 (lower is better)
Translates to: SVLGPKFSLIFR*RWMARCGMRRM
Trigger: CATTCTTCGCATCCCACACCTGGCCATCCATCTGCAGCGAAATATCAACGAGAACTTTGGGCCCAACACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR TCA 72 bp TCCTCTAGTCTCCAAATAAGCGTAGCACGGAGAGTCTaGGTGACAATCCACTTTAATAATCCAGCTTCAGCT +
Preference number: 3 (lower is better)
Translates to: SSSLQISVARRV*VTIHFNNPASA
Trigger: AGCTGAAGCTGGATTATTAAAGTGGATTGTCACTCAGACTCTCCGTGCTACGCTTATTTGGAGACTAGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
3UTR-3UTR CAA 90 bp TATAATGTTTTGAAGGTACTCCTTGTCCTGTGTCCAGTTCTGCAACCTGCCTTTTGGAAGGACACCAGTTaGCACAATTATTTTAGTGGA +
Preference number: 3 (lower is better)
Translates to: YNVLKVLLVLCPVLQPAFWKDTS*HNYFSG
Trigger: TCCACTAAAATAATTGTGCAAACTGGTGTCCTTCCA...AAAGGCAGGTTGCAGAACTGGACACAGGACAAGGAGTACCTTCAAAACATTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273075.9
CDS-3UTR CCA 90 bp AGCCCACCTGGCTGCGGCGAGACCGACGTTTCACCCGGAGGCAGGGGCTGTCCGGGGCCTTACCGTTCATaGCCACCTGCATGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: SPPGCGETDVSPGGRGCPGPYRS*PPAWPR
Trigger: GCGGGGCCATGCAGGTGGCCATGAACGGTAAGGCCC...CGGACAGCCCCTGCCTCCGGGTGAAACGTCGGTCTCGCCGCAGCCAGGTGGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373963.5
CDS-3UTR TCA 90 bp AGCCCACCTGGCTGCGGCGAGACCGACGTTTCACCCGGAGGCAGGGGCTGTCCGCCTGCAGGGGGACCTTaGCTTTGTTGGCCACCTCTC +
Preference number: 4 (lower is better)
Translates to: SPPGCGETDVSPGGRGCPPAGGP*LCWPPL
Trigger: GAGAGGTGGCCAACAAAGTCAAGGTCCCCCTGCAGG...CGGACAGCCCCTGCCTCCGGGTGAAACGTCGGTCTCGCCGCAGCCAGGTGGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR TCA 90 bp AGTGCATGGCCAGTTGGGGGCTGCCTAAATCCAGCACCCGCAGCCCCAGCCGAGGTGACCATGCGCACGTaGGGCTCTGTGGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SAWPVGGCLNPAPAAPAEVTMRT*GSVARE
Trigger: CTCCCTGGCCACAGAGCCTCACGTGCGCATGGTCAC...CTCGGCTGGGGCTGCGGGTGCTGGATTTAGGCAGCCCCCAACTGGCCATGCACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR TCA 90 bp GTGGGCCCCGATGAGGCTGAAGCCATTGCCAGGAACGTACTGGCCCCCTACAGCGTGCTGGCACGAGGCTaGGATCCGCCGCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: VGPDEAEAIARNVLAPYSVLARG*DPPQHQ
Trigger: CTGGTGCTGCGGCGGATCTCAGCCTCGTGCCAGCAC...GCTGTAGGGGGCCAGTACGTTCCTGGCAATGGCTTCAGCCTCATCGGGGCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR GCA 90 bp AGCCCACCTGGCTGCGGCGAGACCGACGTTTCACCCGGAGGCAGGGGCTGTCCGCCTGGAGAAGGCGGTTaGGGCATTCAGCCACAGCAT +
Preference number: 4 (lower is better)
Translates to: SPPGCGETDVSPGGRGCPPGEGG*GIQPQH
Trigger: ATGCTGTGGCTGAATGCCGCAACCGCCTTCTCCAGG...CGGACAGCCCCTGCCTCCGGGTGAAACGTCGGTCTCGCCGCAGCCAGGTGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373966.5
CDS-3UTR GCA 90 bp CGTCAGGTCACCCTCCGCGGGGCTTTCGGTTTCGCTTTGGGTCAGGCGGCCCCATCCACGTGCACCAGCTaGTGCTCCAGCCGACCTGAG +
Preference number: 4 (lower is better)
Translates to: RQVTLRGAFGFALGQAAPSTCTS*CSSRPE
Trigger: CTCAGGTCGGCTGGAGCAGCAGCTGGTGCACGTGGA...TGGGGCCGCCTGACCCAAAGCGAAACCGAAAGCCCCGCGGAGGGTGACCTGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373966.5
CDS-3UTR CCA 90 bp CTGCAGATGGATGGCCAGGTGTGGGATGCGAAGAATGGGCCGCTCCACGTGCACCTGTGTCCGCTCATCTaGCCTCCGGGCTCGGCCCGC +
Preference number: 4 (lower is better)
Translates to: LQMDGQVWDAKNGPLHVHLCPLI*PPGSAR
Trigger: GCGGGCCGAGCCCGGAGGCCAGATGAGCGGACACAG...GTGCACGTGGAGCGGCCCATTCTTCGCATCCCACACCTGGCCATCCATCTGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR GCA 90 bp TGGGATGCGAAGAATGGGCCGCTCCACGTGCACCAGCTGCTGCTCCAGCCGACCGGAAGCCCACCTGGCTaGGGCGAGACCGACGTTTCA +
Preference number: 4 (lower is better)
Translates to: WDAKNGPLHVHQLLLQPTGSPPG*GETDVS
Trigger: TGAAACGTCGGTCTCGCCGCAGCCAGGTGGGCTTCC...GGTCGGCTGGAGCAGCAGCTGGTGCACGTGGAGCGGCCCATTCTTCGCATCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CCA 90 bp GTGGGCCCCGATGAGGCTGAAGCCATTGCCAGGAACGTACTGGCCCCCTACAGCTGCTGGAAGCCCACCTaGCTGCGGCGAGACCGACGT +
Preference number: 4 (lower is better)
Translates to: VGPDEAEAIARNVLAPYSCWKPT*LRRDRR
Trigger: ACGTCGGTCTCGCCGCAGCCAGGTGGGCTTCCAGCA...GCTGTAGGGGGCCAGTACGTTCCTGGCAATGGCTTCAGCCTCATCGGGGCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CCA 90 bp AGTGCATGGCCAGTTGGGGGCTGCCTAAATCCAGCACCCGCAGCCCCAGCCGAGAAGGCTGTCGGGTGCTaGCACGAGGCTGAGATCCGC +
Preference number: 4 (lower is better)
Translates to: SAWPVGGCLNPAPAAPAEKAVGC*HEAEIR
Trigger: GCGGATCTCAGCCTCGTGCCAGCACCCGACAGCCTT...CTCGGCTGGGGCTGCGGGTGCTGGATTTAGGCAGCCCCCAACTGGCCATGCACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CCA 90 bp GCGAGACCGACGTTTCACCCGGAGGCAGGGGCTGTCCGTGTGGGCCCCGATGAGGGGCCTTACCGTTCATaGCCACCTAGTCTCTCGCAG +
Preference number: 4 (lower is better)
Translates to: ARPTFHPEAGAVRVGPDEGPYRS*PPSLSQ
Trigger: CTGCGAGAGACTAGGTGGCCATGAACGGTAAGGCCC...CTCATCGGGGCCCACACGGACAGCCCCTGCCTCCGGGTGAAACGTCGGTCTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373966.5
3UTR CAA 72 bp GCTCCAGATCCCACCACCATAGGTCTCCACACCGACTaGCTGGAAGCCCACCTGGCTGCGGCGAGACCGACG +
Preference number: 4 (lower is better)
Translates to: APDPTTIGLHTD*LEAHLAAARPT
Trigger: CGTCGGTCTCGCCGCAGCCAGGTGGGCTTCCAGCAAGTCGGTGTGGAGACCTATGGTGGTGGGATCTGGAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR TCA 90 bp GCTGCAGATGGATGGCCAGGTGTGGGATGCGAAGAATGGGCCGCTCCACGTGCAGTGACCATGCGCACGTaGGGCTCTGTGGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: AADGWPGVGCEEWAAPRAVTMRT*GSVARE
Trigger: CTCCCTGGCCACAGAGCCTCACGTGCGCATGGTCAC...TGCACGTGGAGCGGCCCATTCTTCGCATCCCACACCTGGCCATCCATCTGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR GCA 90 bp GCGCTGATCATGAAGGACTTGGGTATGGCTTCCTCGAAGGCTGTCGGGTGCTGGCCGTTCATGGCCACCTaGATGGCCCCGCGCGTGGGG +
Preference number: 4 (lower is better)
Translates to: ALIMKDLGMASSKAVGCWPFMAT*MAPRVG
Trigger: CCCCACGCGCGGGGCCATGCAGGTGGCCATGAACGG...CCAGCACCCGACAGCCTTCGAGGAAGCCATACCCAAGTCCTTCATGATCAGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373963.5
CDS-3UTR GCA 90 bp AGTGCATGGCCAGTTGGGGGCTGCCTAAATCCAGCACCCGCAGCCCCAGCCGAGTGGCCAGTTGGGGGCTaGCTAAATCCAGCACCCGCA +
Preference number: 4 (lower is better)
Translates to: SAWPVGGCLNPAPAAPAEWPVGG*LNPAPA
Trigger: TGCGGGTGCTGGATTTAGGCAGCCCCCAACTGGCCA...CTCGGCTGGGGCTGCGGGTGCTGGATTTAGGCAGCCCCCAACTGGCCATGCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR GCA 90 bp GCCAGCCTGGAGAAGGCGGTTGCGGCATTCAGCCACAGCATGGAAAGGAGAGGGGTCAGGCGGCCCCACTaGAGCACCGCGCTAAGCTTG +
Preference number: 4 (lower is better)
Translates to: ASLEKAVAAFSHSMERRGVRRPH*STALSL
Trigger: CAAGCTTAGCGCGGTGCTGCAGTGGGGCCGCCTGAC...CCCTCTCCTTTCCATGCTGTGGCTGAATGCCGCAACCGCCTTCTCCAGGCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373966.5
CDS-3UTR CCA 90 bp AGCAGCTCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGAAGGCAGAGCGGGACTGTGTCCGCTCATCTaGCCTCCGGGCTCGGCCCGC +
Preference number: 4 (lower is better)
Translates to: SSSEGGPVQNRISEGRAGLCPLI*PPGSAR
Trigger: GCGGGCCGAGCCCGGAGGCCAGATGAGCGGACACAG...TCCCGCTCTGCCTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAGAGCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273075.9
CDS-3UTR CCA 90 bp CACCACCCAAGACCGCAGGCTGGGTGTCTGCAAGGCAGAGCTCCATCTCCACTAGCATGGCCCCGCGCGTaGGGCTGTGTCCGCTCATCT +
Preference number: 4 (lower is better)
Translates to: HHPRPQAGCLQGRAPSPLAWPRA*GCVRSS
Trigger: AGATGAGCGGACACAGCCCCACGCGCGGGGCCATGC...TAGTGGAGATGGAGCTCTGCCTTGCAGACACCCAGCCTGCGGTCTTGGGTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR TCA 90 bp GAAGCCCACCTGGCTGCGGCGAGACCGACGTTTCACCCGGAGGCAGGGGCTGTCAGGAGTTCCTGGTCATaGAGTACTTGCTCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: EAHLAAARPTFHPEAGAVRSSWS*STCSRA
Trigger: AGCCCGAGAGCAAGTACTTCATGACCAGGAACTCCT...GACAGCCCCTGCCTCCGGGTGAAACGTCGGTCTCGCCGCAGCCAGGTGGGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR TCA 90 bp CGTCAGGTCACCCTCCGCGGGGCTTTCGGTTTCGCTTTGGGTCAGGCGGCCCCACGTTGTCATAGAGTGTaGCCATGCGCACGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: RQVTLRGAFGFALGQAAPRCHRV*PCAREA
Trigger: AGCCTCACGTGCGCATGGTCACACTCTATGACAACG...TGGGGCCGCCTGACCCAAAGCGAAACCGAAAGCCCCGCGGAGGGTGACCTGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373966.5
CDS-3UTR GCA 90 bp GCCAGCCTGGAGAAGGCGGTTGCGGCATTCAGCCACAGCATGGAAAGGAGAGGGTCCTTAGCCGCAGTCTaGACCGCCTCTTTGCGGGCC +
Preference number: 4 (lower is better)
Translates to: ASLEKAVAAFSHSMERRGSLAAV*TASLRA
Trigger: GGCCCGCAAAGAGGCGGTGCAGACTGCGGCTAAGGA...CCCTCTCCTTTCCATGCTGTGGCTGAATGCCGCAACCGCCTTCTCCAGGCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373966.5
ENST00000519698.1
CDS-3UTR CCA 90 bp GTCCAGCCGAGGAGCAAAGATGAACTCATCATAGGCACCACCCAAGACCGCAGGCTGTGTCCGCTCATCTaGCCTCCGGGCTCGGCCCGC +
Preference number: 4 (lower is better)
Translates to: VQPRSKDELIIGTTQDRRLCPLI*PPGSAR
Trigger: GCGGGCCGAGCCCGGAGGCCAGATGAGCGGACACAG...CCTGCGGTCTTGGGTGGTGCCTATGATGAGTTCATCTTTGCTCCTCGGCTGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CCA 90 bp AGCCCACCTGGCTGCGGCGAGACCGACGTTTCACCCGGAGGCAGGGGCTGTCCGATATTTCGCTGCAGATaGATGGCCAGGTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: SPPGCGETDVSPGGRGCPIFRCR*MARCGM
Trigger: CATCCCACACCTGGCCATCCATCTGCAGCGAAATAT...CGGACAGCCCCTGCCTCCGGGTGAAACGTCGGTCTCGCCGCAGCCAGGTGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CCA 90 bp GAGGGTCTGGAGGACTCCTGTGGTGCAGGCCATCTCCCGGATAGAGTGCATGGCAAGGCTGTCGGGTGCTaGCACGAGGCTGAGATCCGC +
Preference number: 4 (lower is better)
Translates to: EGLEDSCGAGHLPDRVHGKAVGC*HEAEIR
Trigger: GCGGATCTCAGCCTCGTGCCAGCACCCGACAGCCTT...GCCATGCACTCTATCCGGGAGATGGCCTGCACCACAGGAGTCCTCCAGACCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CCA 90 bp CGTCAGGTCACCCTCCGCGGGGCTTTCGGTTTCGCTTTGGGTCAGGCGGCCCCATTGGGATGCACAGCATaGGCCATGTCTGCGCTGATC +
Preference number: 4 (lower is better)
Translates to: RQVTLRGAFGFALGQAAPLGCTA*AMSALI
Trigger: GATCAGCGCAGACATGGCCCATGCTGTGCATCCCAA...TGGGGCCGCCTGACCCAAAGCGAAACCGAAAGCCCCGCGGAGGGTGACCTGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373966.5
CDS-3UTR CCA 90 bp CGTCCAGCCAGAGTCAGGTCACGGTCAAACCAGGTGCTCCAGATCCCACCACCAAGCCACTTACCTGCATaGCCCCGCGCGTGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: RPARVRSRSNQVLQIPPPSHLPA*PRAWGC
Trigger: ACAGCCCCACGCGCGGGGCCATGCAGGTAAGTGGCT...TGGTGGTGGGATCTGGAGCACCTGGTTTGACCGTGACCTGACTCTGGCTGGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373966.5
CDS-3UTR TCA 90 bp CGCGTCCAGCCAGAGTCAGGTCACGGTCAAACCAGGTGCTCCAGATCCCACCACCACAGAGCAGGGACATaGGGACCGAATGGTGCCGCT +
Preference number: 4 (lower is better)
Translates to: RVQPESGHGQTRCSRSHHHRAGT*GPNGAA
Trigger: AGCGGCACCATTCGGTCCTCATGTCCCTGCTCTGTG...GTGGTGGGATCTGGAGCACCTGGTTTGACCGTGACCTGACTCTGGCTGGACGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR TCA 90 bp AGTCAGGTCACGGTCAAACCAGGTGCTCCAGATCCCACCACCATAGGTCTCCACGTGCTGGCACGAGGCTaGGATCCGCCGCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: SQVTVKPGAPDPTTIGLHVLARG*DPPQHQ
Trigger: CTGGTGCTGCGGCGGATCTCAGCCTCGTGCCAGCAC...GTGGAGACCTATGGTGGTGGGATCTGGAGCACCTGGTTTGACCGTGACCTGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR GCA 90 bp AGGCAGAGCGGGACACCCATTCTGGGGATGGAAAGAGGGAAGACCGTTGAGGCCTCCACGTGCACCAGCTaGTGCTCCAGCCGACCTGAG +
Preference number: 4 (lower is better)
Translates to: RQSGTPILGMERGKTVEASTCTS*CSSRPE
Trigger: CTCAGGTCGGCTGGAGCAGCAGCTGGTGCACGTGGA...GGCCTCAACGGTCTTCCCTCTTTCCATCCCCAGAATGGGTGTCCCGCTCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR GCA 90 bp CGCGTCCAGCCAGAGTCAGGTCACGGTCAAACCAGGTGCTCCAGATCCCACCACTGGCCAGGTGTGGGATaGGAAGAATGGGCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: RVQPESGHGQTRCSRSHHWPGVG*EEWAAP
Trigger: TGGAGCGGCCCATTCTTCGCATCCCACACCTGGCCA...GTGGTGGGATCTGGAGCACCTGGTTTGACCGTGACCTGACTCTGGCTGGACGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR GCA 90 bp CTGAGATCCGCCGCAGCACCAGCTCTGTCAGCAGTGACTGTGCTCCCTGTGCACCGCAGGCTGGGTGTCTaGAAGGCAGAGCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: LRSAAAPALSAVTVLPVHRRLGV*KAELHL
Trigger: GAGATGGAGCTCTGCCTTGCAGACACCCAGCCTGCG...GTGCACAGGGAGCACAGTCACTGCTGACAGAGCTGGTGCTGCGGCGGATCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CCA 90 bp ATCTCTGAAGGCAGAGCGGGACACCCATTCTGGGGATGGAAAGAGGGAAGACCGGCATGGCCCCGCGCGTaGGGCTGTGTCCGCTCATCT +
Preference number: 4 (lower is better)
Translates to: ISEGRAGHPFWGWKEGRPAWPRA*GCVRSS
Trigger: AGATGAGCGGACACAGCCCCACGCGCGGGGCCATGC...CGGTCTTCCCTCTTTCCATCCCCAGAATGGGTGTCCCGCTCTGCCTTCAGAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp TCTGCCCAGAGCAGCTCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGAAGGCCAGGGGCTGTCCGTGTaGGCCCCGATGAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: SAQSSSEGGPVQNRISEGQGLSV*APMRLK
Trigger: CTTCAGCCTCATCGGGGCCCACACGGACAGCCCCTG...GCCTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAGAGCTGCTCTGGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp CTGCAGATGGATGGCCAGGTGTGGGATGCGAAGAATGGGCCGCTCCACGTGCACGTGGGATGCGAAGAATaGGCCGCTCCACGTGCACCA +
Preference number: 4 (lower is better)
Translates to: LQMDGQVWDAKNGPLHVHVGCEE*AAPRAP
Trigger: TGGTGCACGTGGAGCGGCCCATTCTTCGCATCCCAC...GTGCACGTGGAGCGGCCCATTCTTCGCATCCCACACCTGGCCATCCATCTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CCA 90 bp TGCAGATGGATGGCCAGGTGTGGGATGCGAAGAATGGGCCGCTCCACGTGCACCGTGGGATGCGAAGAATaGGCCGCTCCACGTGCACCA +
Preference number: 4 (lower is better)
Translates to: CRWMARCGMRRMGRSTCTVGCEE*AAPRAP
Trigger: TGGTGCACGTGGAGCGGCCCATTCTTCGCATCCCAC...GGTGCACGTGGAGCGGCCCATTCTTCGCATCCCACACCTGGCCATCCATCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CCA 90 bp TGGGATGCGAAGAATGGGCCGCTCCACGTGCACCAGCTGCTGCTCCAGCCGACCGACATGAGGACCGAATaGTGCCGCTCATCCACAGCA +
Preference number: 4 (lower is better)
Translates to: WDAKNGPLHVHQLLLQPTDMRTE*CRSSTA
Trigger: TGCTGTGGATGAGCGGCACCATTCGGTCCTCATGTC...GGTCGGCTGGAGCAGCAGCTGGTGCACGTGGAGCGGCCCATTCTTCGCATCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CCA 90 bp AGGCAGAGCGGGACACCCATTCTGGGGATGGAAAGAGGGAAGACCGTTGAGGCCCCCAAGACCGCAGGCTaGGTGTCTGCAAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: RQSGTPILGMERGKTVEAPKTAG*VSARQS
Trigger: GCTCTGCCTTGCAGACACCCAGCCTGCGGTCTTGGG...GGCCTCAACGGTCTTCCCTCTTTCCATCCCCAGAATGGGTGTCCCGCTCTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp TGGAGAAGGCGGTTGCGGCATTCAGCCACAGCATGGAAAGGAGAGGGACTCCGGCCCAAGACCGCAGGCTaGGTGTCTGCAAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: WRRRLRHSATAWKGEGLRPKTAG*VSARQS
Trigger: GCTCTGCCTTGCAGACACCCAGCCTGCGGTCTTGGG...CCGGAGTCCCTCTCCTTTCCATGCTGTGGCTGAATGCCGCAACCGCCTTCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373966.5
CDS-3UTR CCA 90 bp TGCAGATGGATGGCCAGGTGTGGGATGCGAAGAATGGGCCGCTCCACGTGCACCCTTTCGGTTTCGCTTTaGGTCAGGCGGCCCCACTGC +
Preference number: 4 (lower is better)
Translates to: CRWMARCGMRRMGRSTCTLSVSL*VRRPHC
Trigger: GCAGTGGGGCCGCCTGACCCAAAGCGAAACCGAAAG...GGTGCACGTGGAGCGGCCCATTCTTCGCATCCCACACCTGGCCATCCATCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373966.5
3UTR CAA 72 bp CGGACCATGAGATCCTGCAGGGGGACCTTGACTTTGTaGGCCACCTCTCGGATCAGGGCCTCTGACACCGCG +
Preference number: 4 (lower is better)
Translates to: RTMRSCRGTLTL*ATSRIRASDTA
Trigger: CGCGGTGTCAGAGGCCCTGATCCGAGAGGTGGCCAACAAAGTCAAGGTCCCCCTGCAGGATCTCATGGTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR TCA 90 bp CTGAGATCCGCCGCAGCACCAGCTCTGTCAGCAGTGACTGTGCTCCCTGTGCACCTGCTCCAGCCGACCTaGGGTAGGGCACTTGACAAT +
Preference number: 4 (lower is better)
Translates to: LRSAAAPALSAVTVLPVHLLQPT*GRALDN
Trigger: ATTGTCAAGTGCCCTACCTCAGGTCGGCTGGAGCAG...GTGCACAGGGAGCACAGTCACTGCTGACAGAGCTGGTGCTGCGGCGGATCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR TCA 90 bp CTTTGTCTGCCCAGAGCAGCTCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGGTGACCATGCGCACGTaGGGCTCTGTGGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LCLPRAALKVAQCRTGSLVTMRT*GSVARE
Trigger: CTCCCTGGCCACAGAGCCTCACGTGCGCATGGTCAC...CAGAGATCCTGTTCTGCACTGGGCCACCTTCAGAGCTGCTCTGGGCAGACAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR TCA 90 bp CCGCAGCCCCAGCCGAGAAGCCAAGATAGGTCCAATGGTGGTTCCACAGGGGGTTGTCATTCCGGACCATaGGATCCTGCAGGGGGACCT +
Preference number: 4 (lower is better)
Translates to: PQPQPRSQDRSNGGSTGGCHSGP*DPAGGP
Trigger: AGGTCCCCCTGCAGGATCTCATGGTCCGGAATGACA...ACCCCCTGTGGAACCACCATTGGACCTATCTTGGCTTCTCGGCTGGGGCTGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR TCA 90 bp GTGGGCCCCGATGAGGCTGAAGCCATTGCCAGGAACGTACTGGCCCCCTACAGCTTGGAAGATTTGGGCTaGGGCCCAGGGATCTCCACT +
Preference number: 4 (lower is better)
Translates to: VGPDEAEAIARNVLAPYSLEDLG*GPGIST
Trigger: AGTGGAGATCCCTGGGCCTCAGCCCAAATCTTCCAA...GCTGTAGGGGGCCAGTACGTTCCTGGCAATGGCTTCAGCCTCATCGGGGCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519698.1
CDS-3UTR GCA 90 bp CAAGCCAGGCTCAACTCCCACTCCTCTAGTCTCCAAATAAGCGTAGCACGGAGACCGTTCATGGCCACCTaGATGGCCCCGCGCGTGGGG +
Preference number: 4 (lower is better)
Translates to: QARLNSHSSSLQISVARRPFMAT*MAPRVG
Trigger: CCCCACGCGCGGGGCCATGCAGGTGGCCATGAACGG...TCTCCGTGCTACGCTTATTTGGAGACTAGAGGAGTGGGAGTTGAGCCTGGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273075.9
CDS-3UTR GCA 90 bp TCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGAAGGCAGAGCGGGACACCCATCCTTAGCCGCAGTCTaGACCGCCTCTTTGCGGGCC +
Preference number: 4 (lower is better)
Translates to: SEGGPVQNRISEGRAGHPSLAAV*TASLRA
Trigger: GGCCCGCAAAGAGGCGGTGCAGACTGCGGCTAAGGA...TGGGTGTCCCGCTCTGCCTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR GCA 90 bp AGCAGCTCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGAAGGCAGAGCGGGAGGAAGCCCACCTGGCTaGGGCGAGACCGACGTTTCA +
Preference number: 4 (lower is better)
Translates to: SSSEGGPVQNRISEGRAGGSPPG*GETDVS
Trigger: TGAAACGTCGGTCTCGCCGCAGCCAGGTGGGCTTCC...TCCCGCTCTGCCTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAGAGCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR GCA 90 bp AGCCTGGAGAAGGCGGTTGCGGCATTCAGCCACAGCATGGAAAGGAGAGGGACTGGAAGCCCACCTGGCTaGGGCGAGACCGACGTTTCA +
Preference number: 4 (lower is better)
Translates to: SLEKAVAAFSHSMERRGTGSPPG*GETDVS
Trigger: TGAAACGTCGGTCTCGCCGCAGCCAGGTGGGCTTCC...AGTCCCTCTCCTTTCCATGCTGTGGCTGAATGCCGCAACCGCCTTCTCCAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373966.5
CDS-3UTR GCA 90 bp TCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGAAGGCAGAGCGGGACACCCAGGAAGCCCACCTGGCTaGGGCGAGACCGACGTTTCA +
Preference number: 4 (lower is better)
Translates to: SEGGPVQNRISEGRAGHPGSPPG*GETDVS
Trigger: TGAAACGTCGGTCTCGCCGCAGCCAGGTGGGCTTCC...TGGGTGTCCCGCTCTGCCTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR GCA 90 bp GTGGGCCCCGATGAGGCTGAAGCCATTGCCAGGAACGTACTGGCCCCCTACAGCCACGGTCAAACCAGGTaGTCCAGATCCCACCACCAT +
Preference number: 4 (lower is better)
Translates to: VGPDEAEAIARNVLAPYSHGQTR*SRSHHH
Trigger: ATGGTGGTGGGATCTGGAGCACCTGGTTTGACCGTG...GCTGTAGGGGGCCAGTACGTTCCTGGCAATGGCTTCAGCCTCATCGGGGCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR GCA 90 bp GGTGGCCCAGTGCAGAACAGGATCTCTGAAGGCAGAGCGGGACACCCATTCTGGCGCAGGCTGGGTGTCTaGAAGGCAGAGCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: GGPVQNRISEGRAGHPFWRRLGV*KAELHL
Trigger: GAGATGGAGCTCTGCCTTGCAGACACCCAGCCTGCG...CCAGAATGGGTGTCCCGCTCTGCCTTCAGAGATCCTGTTCTGCACTGGGCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR GCA 90 bp CACCACCCAAGACCGCAGGCTGGGTGTCTGCAAGGCAGAGCTCCATCTCCACTACGCAGGCTGGGTGTCTaGAAGGCAGAGCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: HHPRPQAGCLQGRAPSPLRRLGV*KAELHL
Trigger: GAGATGGAGCTCTGCCTTGCAGACACCCAGCCTGCG...TAGTGGAGATGGAGCTCTGCCTTGCAGACACCCAGCCTGCGGTCTTGGGTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR GCA 90 bp CCAGGTGCTCCAGATCCCACCACCATAGGTCTCCACACCGACTTGCTGGAAGCCTCGAAGGCTGTCGGGTaGTGGCACGAGGCTGAGATC +
Preference number: 4 (lower is better)
Translates to: PGAPDPTTIGLHTDLLEASKAVG*WHEAEI
Trigger: GATCTCAGCCTCGTGCCAGCACCCGACAGCCTTCGA...GGCTTCCAGCAAGTCGGTGTGGAGACCTATGGTGGTGGGATCTGGAGCACCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR GCA 90 bp CTGCAGATGGATGGCCAGGTGTGGGATGCGAAGAATGGGCCGCTCCACGTGCACATCTCCCGGATAGAGTaGATGGCCAGTTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LQMDGQVWDAKNGPLHVHISRIE*MASWGL
Trigger: CAGCCCCCAACTGGCCATGCACTCTATCCGGGAGAT...GTGCACGTGGAGCGGCCCATTCTTCGCATCCCACACCTGGCCATCCATCTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR GCA 90 bp CTGCTTGAGGATCCAGTCCACCCTTCACCCACTTCAGACATGGACTTGAGACAGCGGGAGCCACTTACCTaGATGGCCCCGCGCGTGGGG +
Preference number: 4 (lower is better)
Translates to: LLEDPVHPSPTSDMDLRQREPLT*MAPRVG
Trigger: CCCCACGCGCGGGGCCATGCAGGTAAGTGGCTCCCG...CTGTCTCAAGTCCATGTCTGAAGTGGGTGAAGGGTGGACTGGATCCTCAAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520694.6
CDS-3UTR CCA 90 bp GTGTGGGCCCCGATGAGGCTGAAGCCATTGCCAGGAACGTACTGGCCCCCTACATCACTGAAGCCAGCCTaGAGAAGGCGGTTGCGGCAT +
Preference number: 4 (lower is better)
Translates to: VWAPMRLKPLPGTYWPPTSLKPA*RRRLRH
Trigger: ATGCCGCAACCGCCTTCTCCAGGCTGGCTTCAGTGA...TGTAGGGGGCCAGTACGTTCCTGGCAATGGCTTCAGCCTCATCGGGGCCCACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373966.5
ENST00000519698.1
CDS-3UTR CCA 90 bp CTTTGTCTGCCCAGAGCAGCTCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGTGCTGGAAGCCCACCTaGCTGCGGCGAGACCGACGT +
Preference number: 4 (lower is better)
Translates to: LCLPRAALKVAQCRTGSLCWKPT*LRRDRR
Trigger: ACGTCGGTCTCGCCGCAGCCAGGTGGGCTTCCAGCA...CAGAGATCCTGTTCTGCACTGGGCCACCTTCAGAGCTGCTCTGGGCAGACAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp GTCAGCAGTGACTGTGCTCCCTGTGCACTCTCAGACCCCACCTCTTCGTTGTCATGCTGGAAGCCCACCTaGCTGCGGCGAGACCGACGT +
Preference number: 4 (lower is better)
Translates to: VSSDCAPCALSDPTSSLSCWKPT*LRRDRR
Trigger: ACGTCGGTCTCGCCGCAGCCAGGTGGGCTTCCAGCA...TGACAACGAAGAGGTGGGGTCTGAGAGTGCACAGGGAGCACAGTCACTGCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CCA 90 bp TCTGCCCAGAGCAGCTCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGAAGGCTCCACACCGACTTGCTaGAAGCCCACCTGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: SAQSSSEGGPVQNRISEGSTPTC*KPTWLR
Trigger: CCGCAGCCAGGTGGGCTTCCAGCAAGTCGGTGTGGA...GCCTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAGAGCTGCTCTGGGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp CCGCAGCCCCAGCCGAGAAGCCAAGATAGGTCCAATGGTGGTTCCACAGGGGGTATGGATGGCCAGGTGTaGGATGCGAAGAATGGGCCG +
Preference number: 4 (lower is better)
Translates to: PQPQPRSQDRSNGGSTGGMDGQV*DAKNGP
Trigger: CGGCCCATTCTTCGCATCCCACACCTGGCCATCCAT...ACCCCCTGTGGAACCACCATTGGACCTATCTTGGCTTCTCGGCTGGGGCTGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CCA 90 bp GAAGGCAGAGCGGGACACCCATTCTGGGGATGGAAAGAGGGAAGACCGTTGAGGAAGGCTGTCGGGTGCTaGCACGAGGCTGAGATCCGC +
Preference number: 4 (lower is better)
Translates to: EGRAGHPFWGWKEGRPLRKAVGC*HEAEIR
Trigger: GCGGATCTCAGCCTCGTGCCAGCACCCGACAGCCTT...CCTCAACGGTCTTCCCTCTTTCCATCCCCAGAATGGGTGTCCCGCTCTGCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR TCA 90 bp CCAGGTGCTCCAGATCCCACCACCATAGGTCTCCACACCGACTTGCTGGAAGCCCTGCTCCAGCCGACCTaGGGTAGGGCACTTGACAAT +
Preference number: 4 (lower is better)
Translates to: PGAPDPTTIGLHTDLLEALLQPT*GRALDN
Trigger: ATTGTCAAGTGCCCTACCTCAGGTCGGCTGGAGCAG...GGCTTCCAGCAAGTCGGTGTGGAGACCTATGGTGGTGGGATCTGGAGCACCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR TCA 90 bp ATCATAGGCACCACCCAAGACCGCAGGCTGGGTGTCTGCAAGGCAGAGCTCCATGCTCATCCACAGCATTaGGAGGCCCTGGCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: IIGTTQDRRLGVCKAELHAHPQH*EALAQE
Trigger: CTCCTGAGCCAGGGCCTCTCAATGCTGTGGATGAGC...ATGGAGCTCTGCCTTGCAGACACCCAGCCTGCGGTCTTGGGTGGTGCCTATGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR TCA 90 bp AGGCAGAGCGGGACACCCATTCTGGGGATGGAAAGAGGGAAGACCGTTGAGGCCCAGCTCTGTCAGCAGTaGCTGTGCTCCCTGTGCACT +
Preference number: 4 (lower is better)
Translates to: RQSGTPILGMERGKTVEAQLCQQ*LCSLCT
Trigger: AGTGCACAGGGAGCACAGTCACTGCTGACAGAGCTG...GGCCTCAACGGTCTTCCCTCTTTCCATCCCCAGAATGGGTGTCCCGCTCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR TCA 90 bp AGTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCACCCACTTCAGACATGGACGTGCTGGCACGAGGCTaGGATCCGCCGCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: SDLLLEDPVHPSPTSDMDVLARG*DPPQHQ
Trigger: CTGGTGCTGCGGCGGATCTCAGCCTCGTGCCAGCAC...GTCCATGTCTGAAGTGGGTGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR TCA 90 bp GGAGAAGGCGGTTGCGGCATTCAGCCACAGCATGGAAAGGAGAGGGACTCCGGTGCTTGCTGTTCACCTTaGTCACGGGGCCCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: GEGGCGIQPQHGKERDSGACCSP*SRGPCG
Trigger: TCCACAAGGGCCCCGTGATCAAGGTGAACAGCAAGC...ACCGGAGTCCCTCTCCTTTCCATGCTGTGGCTGAATGCCGCAACCGCCTTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373966.5
CDS-3UTR GCA 90 bp GGTGGCCCAGTGCAGAACAGGATCTCTGAAGGCAGAGCGGGACACCCATTCTGGCCTGGAGAAGGCGGTTaGGGCATTCAGCCACAGCAT +
Preference number: 4 (lower is better)
Translates to: GGPVQNRISEGRAGHPFWPGEGG*GIQPQH
Trigger: ATGCTGTGGCTGAATGCCGCAACCGCCTTCTCCAGG...CCAGAATGGGTGTCCCGCTCTGCCTTCAGAGATCCTGTTCTGCACTGGGCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR GCA 90 bp GTGGGCCCCGATGAGGCTGAAGCCATTGCCAGGAACGTACTGGCCCCCTACAGCATGAGGACCGAATGGTaGCGCTCATCCACAGCATTG +
Preference number: 4 (lower is better)
Translates to: VGPDEAEAIARNVLAPYSMRTEW*RSSTAL
Trigger: CAATGCTGTGGATGAGCGGCACCATTCGGTCCTCAT...GCTGTAGGGGGCCAGTACGTTCCTGGCAATGGCTTCAGCCTCATCGGGGCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR GCA 90 bp TCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGAAGGCAGAGCGGGACACCCATCGAAGGCTGTCGGGTaGTGGCACGAGGCTGAGATC +
Preference number: 4 (lower is better)
Translates to: SEGGPVQNRISEGRAGHPSKAVG*WHEAEI
Trigger: GATCTCAGCCTCGTGCCAGCACCCGACAGCCTTCGA...TGGGTGTCCCGCTCTGCCTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR GCA 90 bp GCTGCAGATGGATGGCCAGGTGTGGGATGCGAAGAATGGGCCGCTCCACGTGCACGGACCATGAGATCCTaGAGGGGGACCTTGACTTTG +
Preference number: 4 (lower is better)
Translates to: AADGWPGVGCEEWAAPRARTMRS*RGTLTL
Trigger: CAAAGTCAAGGTCCCCCTGCAGGATCTCATGGTCCG...TGCACGTGGAGCGGCCCATTCTTCGCATCCCACACCTGGCCATCCATCTGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR GCA 90 bp CCGGTTCACGAACTTGAGGAGTTCCTTAGCCGCAGTCTGCACCGCCTCTTTGCGCGAGCCATGGTGACCTaGTCACCTCCTCCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: PVHELEEFLSRSLHRLFARAMVT*SPPPKA
Trigger: AGCCTTGGGAGGAGGTGAGCAGGTCACCATGGCTCG...CGCAAAGAGGCGGTGCAGACTGCGGCTAAGGAACTCCTCAAGTTCGTGAACCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519698.1
CDS-3UTR CCA 90 bp AGGACTAGGGGTGGGAGAAGTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCATGCTGGAAGCCCACCTaGCTGCGGCGAGACCGACGT +
Preference number: 4 (lower is better)
Translates to: RTRGGRSDLLLEDPVHPSCWKPT*LRRDRR
Trigger: ACGTCGGTCTCGCCGCAGCCAGGTGGGCTTCCAGCA...TGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCACTTCTCCCACCCCTAGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp AGGCAGAGCGGGACACCCATTCTGGGGATGGAAAGAGGGAAGACCGTTGAGGCCATGGATGGCCAGGTGTaGGATGCGAAGAATGGGCCG +
Preference number: 4 (lower is better)
Translates to: RQSGTPILGMERGKTVEAMDGQV*DAKNGP
Trigger: CGGCCCATTCTTCGCATCCCACACCTGGCCATCCAT...GGCCTCAACGGTCTTCCCTCTTTCCATCCCCAGAATGGGTGTCCCGCTCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp TCGGGTGCTGGCACGAGGCTGAGATCCGCCGCAGCACCAGCTCTGTCAGCAGTGTGGAATAAAGGCCGGTaGTTCTCCTCATGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: SGAGTRLRSAAAPALSAVWNKGR*FSSCLS
Trigger: GGACAAGCATGAGGAGAACCACCGGCCTTTATTCCA...CACTGCTGACAGAGCTGGTGCTGCGGCGGATCTCAGCCTCGTGCCAGCACCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CCA 90 bp AGCCTGGAGAAGGCGGTTGCGGCATTCAGCCACAGCATGGAAAGGAGAGGGACTTCTGGAGGACTCCTGTaGTGCAGGCCATCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: SLEKAVAAFSHSMERRGTSGGLL*CRPSPG
Trigger: TCCGGGAGATGGCCTGCACCACAGGAGTCCTCCAGA...AGTCCCTCTCCTTTCCATGCTGTGGCTGAATGCCGCAACCGCCTTCTCCAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373966.5
CDS-3UTR CCA 90 bp AGGCAGAGCGGGACACCCATTCTGGGGATGGAAAGAGGGAAGACCGTTGAGGCCAAGAGGGTGAGGGTCTaGAGGACTCCTGTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: RQSGTPILGMERGKTVEAKRVRV*RTPVVQ
Trigger: CTGCACCACAGGAGTCCTCCAGACCCTCACCCTCTT...GGCCTCAACGGTCTTCCCTCTTTCCATCCCCAGAATGGGTGTCCCGCTCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp GGTGGCCCAGTGCAGAACAGGATCTCTGAAGGCAGAGCGGGACACCCATTCTGGAGGCCATTTCCCAGGTaGAGGACTAGGGGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: GGPVQNRISEGRAGHPFWRPFPR*RTRGGR
Trigger: TCTCCCACCCCTAGTCCTCCACCTGGGAAATGGCCT...CCAGAATGGGTGTCCCGCTCTGCCTTCAGAGATCCTGTTCTGCACTGGGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp GGTGGCCCAGTGCAGAACAGGATCTCTGAAGGCAGAGCGGGACACCCATTCTGGGCTCCTGAGAGGGGATaGGAAGGGATTTTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: GGPVQNRISEGRAGHPFWAPERG*EGILGG
Trigger: CCCTCCCAAAATCCCTTCCCATCCCCTCTCAGGAGC...CCAGAATGGGTGTCCCGCTCTGCCTTCAGAGATCCTGTTCTGCACTGGGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp TCTGCCCAGAGCAGCTCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGAAGGCGCGCCGGACCCGGTCTaGGATCGAAATTCAAGTGGG +
Preference number: 4 (lower is better)
Translates to: SAQSSSEGGPVQNRISEGAPDPV*DRNSSG
Trigger: CCCACTTGAATTTCGATCCCAGACCGGGTCCGGCGC...GCCTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAGAGCTGCTCTGGGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520694.6
CDS-3UTR TCA 90 bp CCGCAGCCCCAGCCGAGAAGCCAAGATAGGTCCAATGGTGGTTCCACAGGGGGTAGGAGTTCCTGGTCATaGAGTACTTGCTCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: PQPQPRSQDRSNGGSTGGRSSWS*STCSRA
Trigger: AGCCCGAGAGCAAGTACTTCATGACCAGGAACTCCT...ACCCCCTGTGGAACCACCATTGGACCTATCTTGGCTTCTCGGCTGGGGCTGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR TCA 90 bp CTTTGTCTGCCCAGAGCAGCTCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGGCTCATCCACAGCATTaGGAGGCCCTGGCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: LCLPRAALKVAQCRTGSLAHPQH*EALAQE
Trigger: CTCCTGAGCCAGGGCCTCTCAATGCTGTGGATGAGC...CAGAGATCCTGTTCTGCACTGGGCCACCTTCAGAGCTGCTCTGGGCAGACAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR TCA 90 bp CTTTGTCTGCCCAGAGCAGCTCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGCACAGAGCAGGGACATaGGGACCGAATGGTGCCGCT +
Preference number: 4 (lower is better)
Translates to: LCLPRAALKVAQCRTGSLHRAGT*GPNGAA
Trigger: AGCGGCACCATTCGGTCCTCATGTCCCTGCTCTGTG...CAGAGATCCTGTTCTGCACTGGGCCACCTTCAGAGCTGCTCTGGGCAGACAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR TCA 90 bp CTGCTCCCCAACTTTTCTGGTTCCAAAGGTTCAAGCCAGGCTCAACTCCCACTCGTGACCATGCGCACGTaGGGCTCTGTGGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LLPNFSGSKGSSQAQLPLVTMRT*GSVARE
Trigger: CTCCCTGGCCACAGAGCCTCACGTGCGCATGGTCAC...GAGTGGGAGTTGAGCCTGGCTTGAACCTTTGGAACCAGAAAAGTTGGGGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR TCA 90 bp CCAGGTGCTCCAGATCCCACCACCATAGGTCTCCACACCGACTTGCTGGAAGCCCGTTGTCATAGAGTGTaGCCATGCGCACGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: PGAPDPTTIGLHTDLLEARCHRV*PCAREA
Trigger: AGCCTCACGTGCGCATGGTCACACTCTATGACAACG...GGCTTCCAGCAAGTCGGTGTGGAGACCTATGGTGGTGGGATCTGGAGCACCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR TCA 90 bp TCTGCCCAGAGCAGCTCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGAAGGCGCTTGCTGTTCACCTTaGTCACGGGGCCCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: SAQSSSEGGPVQNRISEGACCSP*SRGPCG
Trigger: TCCACAAGGGCCCCGTGATCAAGGTGAACAGCAAGC...GCCTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAGAGCTGCTCTGGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR TCA 90 bp TGTCTGCCCAGAGCAGCTCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGAAGCCTGCAGGGGGACCTTaGCTTTGTTGGCCACCTCTC +
Preference number: 4 (lower is better)
Translates to: CLPRAALKVAQCRTGSLKPAGGP*LCWPPL
Trigger: GAGAGGTGGCCAACAAAGTCAAGGTCCCCCTGCAGG...CTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAGAGCTGCTCTGGGCAGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR TCA 90 bp GTCCAGCCGAGGAGCAAAGATGAACTCATCATAGGCACCACCCAAGACCGCAGGCCTGCAGGGGGACCTTaGCTTTGTTGGCCACCTCTC +
Preference number: 4 (lower is better)
Translates to: VQPRSKDELIIGTTQDRRPAGGP*LCWPPL
Trigger: GAGAGGTGGCCAACAAAGTCAAGGTCCCCCTGCAGG...CCTGCGGTCTTGGGTGGTGCCTATGATGAGTTCATCTTTGCTCCTCGGCTGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR GCA 90 bp AGCAGCTCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGAAGGCAGAGCGGGATCTGCACCGCCTCTTTaGGGGCCTTACCGTTCATGG +
Preference number: 4 (lower is better)
Translates to: SSSEGGPVQNRISEGRAGSAPPL*GPYRSW
Trigger: CCATGAACGGTAAGGCCCGCAAAGAGGCGGTGCAGA...TCCCGCTCTGCCTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAGAGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR GCA 90 bp ATGTCTGCGCTGATCATGAAGGACTTGGGTATGGCTTCCTCGAAGGCTGTCGGGTCCTTAGCCGCAGTCTaGACCGCCTCTTTGCGGGCC +
Preference number: 4 (lower is better)
Translates to: MSALIMKDLGMASSKAVGSLAAV*TASLRA
Trigger: GGCCCGCAAAGAGGCGGTGCAGACTGCGGCTAAGGA...CCCGACAGCCTTCGAGGAAGCCATACCCAAGTCCTTCATGATCAGCGCAGACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR GCA 90 bp CGTCCAGCCAGAGTCAGGTCACGGTCAAACCAGGTGCTCCAGATCCCACCACCACACGGTCAAACCAGGTaGTCCAGATCCCACCACCAT +
Preference number: 4 (lower is better)
Translates to: RPARVRSRSNQVLQIPPPHGQTR*SRSHHH
Trigger: ATGGTGGTGGGATCTGGAGCACCTGGTTTGACCGTG...TGGTGGTGGGATCTGGAGCACCTGGTTTGACCGTGACCTGACTCTGGCTGGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR GCA 90 bp TGGAGGACTAGGGGTGGGAGAAGTGACCTTCTGCTTGAGGATCCAGTCCACCCTTGGCCAGGTGTGGGATaGGAAGAATGGGCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: WRTRGGRSDLLLEDPVHPWPGVG*EEWAAP
Trigger: TGGAGCGGCCCATTCTTCGCATCCCACACCTGGCCA...AGGGTGGACTGGATCCTCAAGCAGAAGGTCACTTCTCCCACCCCTAGTCCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR GCA 90 bp ATGGGCACAGAGCAGGGACATGAGGACCGAATGGTGCCGCTCATCCACAGCATTTGGCCAGGTGTGGGATaGGAAGAATGGGCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: MGTEQGHEDRMVPLIHSIWPGVG*EEWAAP
Trigger: TGGAGCGGCCCATTCTTCGCATCCCACACCTGGCCA...AATGCTGTGGATGAGCGGCACCATTCGGTCCTCATGTCCCTGCTCTGTGCCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR GCA 90 bp CTTTGTCTGCCCAGAGCAGCTCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGTGGCCAGGTGTGGGATaGGAAGAATGGGCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: LCLPRAALKVAQCRTGSLWPGVG*EEWAAP
Trigger: TGGAGCGGCCCATTCTTCGCATCCCACACCTGGCCA...CAGAGATCCTGTTCTGCACTGGGCCACCTTCAGAGCTGCTCTGGGCAGACAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR GCA 90 bp GGTGGCCCAGTGCAGAACAGGATCTCTGAAGGCAGAGCGGGACACCCATTCTGGGCACAGAAGCAGCTGTaGAGATTGTCCAGCCGAGGA +
Preference number: 4 (lower is better)
Translates to: GGPVQNRISEGRAGHPFWAQKQL*RLSSRG
Trigger: TCCTCGGCTGGACAATCTGCACAGCTGCTTCTGTGC...CCAGAATGGGTGTCCCGCTCTGCCTTCAGAGATCCTGTTCTGCACTGGGCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR GCA 90 bp GTTCACGAACTTGAGGAGTTCCTTAGCCGCAGTCTGCACCGCCTCTTTGCGGGCCAGGGAGCCAGGGCCTaGACAGGAATCTATCAAGGC +
Preference number: 4 (lower is better)
Translates to: VHELEEFLSRSLHRLFAGQGARA*TGIYQG
Trigger: GCCTTGATAGATTCCTGTGCAGGCCCTGGCTCCCTG...GCCCGCAAAGAGGCGGTGCAGACTGCGGCTAAGGAACTCCTCAAGTTCGTGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373966.5
CDS-3UTR GCA 90 bp CTGATCATGAAGGACTTGGGTATGGCTTCCTCGAAGGCTGTCGGGTGCTGGCACTCGAAGGCTGTCGGGTaGTGGCACGAGGCTGAGATC +
Preference number: 4 (lower is better)
Translates to: LIMKDLGMASSKAVGCWHSKAVG*WHEAEI
Trigger: GATCTCAGCCTCGTGCCAGCACCCGACAGCCTTCGA...GTGCCAGCACCCGACAGCCTTCGAGGAAGCCATACCCAAGTCCTTCATGATCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR GCA 90 bp TGTCTGCCCAGAGCAGCTCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGAAGTGGCCAGTTGGGGGCTaGCTAAATCCAGCACCCGCA +
Preference number: 4 (lower is better)
Translates to: CLPRAALKVAQCRTGSLKWPVGG*LNPAPA
Trigger: TGCGGGTGCTGGATTTAGGCAGCCCCCAACTGGCCA...CTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAGAGCTGCTCTGGGCAGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR GCA 90 bp GCCCCGATGAGGCTGAAGCCATTGCCAGGAACGTACTGGCCCCCTACAGCAAAAATCTCCCGGATAGAGTaGATGGCCAGTTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: APMRLKPLPGTYWPPTAKISRIE*MASWGL
Trigger: CAGCCCCCAACTGGCCATGCACTCTATCCGGGAGAT...TTTTGCTGTAGGGGGCCAGTACGTTCCTGGCAATGGCTTCAGCCTCATCGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR GCA 90 bp GAAGGCAGAGCGGGACACCCATTCTGGGGATGGAAAGAGGGAAGACCGTTGAGGACAGATGTGAGCCGCTaGACCCGGCCAGACTTTGAC +
Preference number: 4 (lower is better)
Translates to: EGRAGHPFWGWKEGRPLRTDVSR*TRPDFD
Trigger: GTCAAAGTCTGGCCGGGTGCAGCGGCTCACATCTGT...CCTCAACGGTCTTCCCTCTTTCCATCCCCAGAATGGGTGTCCCGCTCTGCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR GCA 90 bp GAAGGCAGAGCGGGACACCCATTCTGGGGATGGAAAGAGGGAAGACCGTTGAGGTCGCCCAGGCTGGAGTaGAGTGGCTCAATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: EGRAGHPFWGWKEGRPLRSPRLE*SGSILA
Trigger: AGCCAAGATTGAGCCACTGCACTCCAGCCTGGGCGA...CCTCAACGGTCTTCCCTCTTTCCATCCCCAGAATGGGTGTCCCGCTCTGCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273075.9
CDS-3UTR GCA 90 bp AAAGTTCTCGTTGATATTTCGCTGCAGATGGATGGCCAGGTGTGGGATGCGAAGCGGGAGCCACTTACCTaGATGGCCCCGCGCGTGGGG +
Preference number: 4 (lower is better)
Translates to: KVLVDISLQMDGQVWDAKREPLT*MAPRVG
Trigger: CCCCACGCGCGGGGCCATGCAGGTAAGTGGCTCCCG...CTTCGCATCCCACACCTGGCCATCCATCTGCAGCGAAATATCAACGAGAACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373966.5
CDS-3UTR GCA 90 bp GTTCAAGCCAGGCTCAACTCCCACTCCTCTAGTCTCCAAATAAGCGTAGCACGGGTCAGGCGGCCCCACTaGAGCACCGCGCTAAGCTTG +
Preference number: 4 (lower is better)
Translates to: VQARLNSHSSSLQISVARVRRPH*STALSL
Trigger: CAAGCTTAGCGCGGTGCTGCAGTGGGGCCGCCTGAC...CCGTGCTACGCTTATTTGGAGACTAGAGGAGTGGGAGTTGAGCCTGGCTTGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520694.6
CDS-3UTR CCA 90 bp CTGCTCCCCAACTTTTCTGGTTCCAAAGGTTCAAGCCAGGCTCAACTCCCACTCGGGCCTTACCGTTCATaGCCACCTGCATGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: LLPNFSGSKGSSQAQLPLGPYRS*PPAWPR
Trigger: GCGGGGCCATGCAGGTGGCCATGAACGGTAAGGCCC...GAGTGGGAGTTGAGCCTGGCTTGAACCTTTGGAACCAGAAAAGTTGGGGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273075.9
CDS-3UTR CCA 90 bp GGTGGCCCAGTGCAGAACAGGATCTCTGAAGGCAGAGCGGGACACCCATTCTGGCATTCAGCCACAGCATaGAAAGGAGAGGGACTCCGG +
Preference number: 4 (lower is better)
Translates to: GGPVQNRISEGRAGHPFWHSATA*KGEGLR
Trigger: CCGGAGTCCCTCTCCTTTCCATGCTGTGGCTGAATG...CCAGAATGGGTGTCCCGCTCTGCCTTCAGAGATCCTGTTCTGCACTGGGCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp GAAGCCAGCCTGGAGAAGGCGGTTGCGGCATTCAGCCACAGCATGGAAAGGAGATCACTGAAGCCAGCCTaGAGAAGGCGGTTGCGGCAT +
Preference number: 4 (lower is better)
Translates to: EASLEKAVAAFSHSMERRSLKPA*RRRLRH
Trigger: ATGCCGCAACCGCCTTCTCCAGGCTGGCTTCAGTGA...TCTCCTTTCCATGCTGTGGCTGAATGCCGCAACCGCCTTCTCCAGGCTGGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373966.5
ENST00000519698.1
CDS-3UTR CCA 90 bp CATTCAGCCACAGCATGGAAAGGAGAGGGACTCCGGTTCACGAACTTGAGGAGTCAGGGGCTGTCCGTGTaGGCCCCGATGAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: HSATAWKGEGLRFTNLRSQGLSV*APMRLK
Trigger: CTTCAGCCTCATCGGGGCCCACACGGACAGCCCCTG...ACTCCTCAAGTTCGTGAACCGGAGTCCCTCTCCTTTCCATGCTGTGGCTGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373966.5
CDS-3UTR CCA 90 bp CTTTGTCTGCCCAGAGCAGCTCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGGTGGGATGCGAAGAATaGGCCGCTCCACGTGCACCA +
Preference number: 4 (lower is better)
Translates to: LCLPRAALKVAQCRTGSLVGCEE*AAPRAP
Trigger: TGGTGCACGTGGAGCGGCCCATTCTTCGCATCCCAC...CAGAGATCCTGTTCTGCACTGGGCCACCTTCAGAGCTGCTCTGGGCAGACAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp CCGGTTCACGAACTTGAGGAGTTCCTTAGCCGCAGTCTGCACCGCCTCTTTGCGTCTCCACTATGTCCTTaGGGCTCAGCCCCAGATGGG +
Preference number: 4 (lower is better)
Translates to: PVHELEEFLSRSLHRLFASPLCP*GSAPDG
Trigger: CCCATCTGGGGCTGAGCCCCAAGGACATAGTGGAGA...CGCAAAGAGGCGGTGCAGACTGCGGCTAAGGAACTCCTCAAGTTCGTGAACCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373966.5
CDS-3UTR CCA 90 bp TCTGCCCAGAGCAGCTCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGAAGGCGAGTGCATGGCCAGTTaGGGGCTGCCTAAATCCAGC +
Preference number: 4 (lower is better)
Translates to: SAQSSSEGGPVQNRISEGECMAS*GLPKSS
Trigger: GCTGGATTTAGGCAGCCCCCAACTGGCCATGCACTC...GCCTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAGAGCTGCTCTGGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp GCCCCGATGAGGCTGAAGCCATTGCCAGGAACGTACTGGCCCCCTACAGCAAAAGAGTGCATGGCCAGTTaGGGGCTGCCTAAATCCAGC +
Preference number: 4 (lower is better)
Translates to: APMRLKPLPGTYWPPTAKECMAS*GLPKSS
Trigger: GCTGGATTTAGGCAGCCCCCAACTGGCCATGCACTC...TTTTGCTGTAGGGGGCCAGTACGTTCCTGGCAATGGCTTCAGCCTCATCGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CCA 90 bp CTGATCATGAAGGACTTGGGTATGGCTTCCTCGAAGGCTGTCGGGTGCTGGCACTCTGGAGGACTCCTGTaGTGCAGGCCATCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: LIMKDLGMASSKAVGCWHSGGLL*CRPSPG
Trigger: TCCGGGAGATGGCCTGCACCACAGGAGTCCTCCAGA...GTGCCAGCACCCGACAGCCTTCGAGGAAGCCATACCCAAGTCCTTCATGATCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CCA 90 bp CAAGCCAGGCTCAACTCCCACTCCTCTAGTCTCCAAATAAGCGTAGCACGGAGAAGCCACTTACCTGCATaGCCCCGCGCGTGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: QARLNSHSSSLQISVARRSHLPA*PRAWGC
Trigger: ACAGCCCCACGCGCGGGGCCATGCAGGTAAGTGGCT...TCTCCGTGCTACGCTTATTTGGAGACTAGAGGAGTGGGAGTTGAGCCTGGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520694.6
CDS-3UTR TCA 90 bp AGGACTAGGGGTGGGAGAAGTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCAGCTCATCCACAGCATTaGGAGGCCCTGGCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: RTRGGRSDLLLEDPVHPSAHPQH*EALAQE
Trigger: CTCCTGAGCCAGGGCCTCTCAATGCTGTGGATGAGC...TGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCACTTCTCCCACCCCTAGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR TCA 90 bp TGGAAAGGAGAGGGACTCCGGTTCACGAACTTGAGGAGTTCCTTAGCCGCAGTCCACAGAGCAGGGACATaGGGACCGAATGGTGCCGCT +
Preference number: 4 (lower is better)
Translates to: WKGEGLRFTNLRSSLAAVHRAGT*GPNGAA
Trigger: AGCGGCACCATTCGGTCCTCATGTCCCTGCTCTGTG...GACTGCGGCTAAGGAACTCCTCAAGTTCGTGAACCGGAGTCCCTCTCCTTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373966.5
CDS-3UTR TCA 90 bp CTGATCATGAAGGACTTGGGTATGGCTTCCTCGAAGGCTGTCGGGTGCTGGCACCAGCTCTGTCAGCAGTaGCTGTGCTCCCTGTGCACT +
Preference number: 4 (lower is better)
Translates to: LIMKDLGMASSKAVGCWHQLCQQ*LCSLCT
Trigger: AGTGCACAGGGAGCACAGTCACTGCTGACAGAGCTG...GTGCCAGCACCCGACAGCCTTCGAGGAAGCCATACCCAAGTCCTTCATGATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR GCA 90 bp CTGCTCCCCAACTTTTCTGGTTCCAAAGGTTCAAGCCAGGCTCAACTCCCACTCTCCTTAGCCGCAGTCTaGACCGCCTCTTTGCGGGCC +
Preference number: 4 (lower is better)
Translates to: LLPNFSGSKGSSQAQLPLSLAAV*TASLRA
Trigger: GGCCCGCAAAGAGGCGGTGCAGACTGCGGCTAAGGA...GAGTGGGAGTTGAGCCTGGCTTGAACCTTTGGAACCAGAAAAGTTGGGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR GCA 90 bp GAAGCCATTGCCAGGAACGTACTGGCCCCCTACAGCAAAAGCTATGATGGTGGATCCTTAGCCGCAGTCTaGACCGCCTCTTTGCGGGCC +
Preference number: 4 (lower is better)
Translates to: EAIARNVLAPYSKSYDGGSLAAV*TASLRA
Trigger: GGCCCGCAAAGAGGCGGTGCAGACTGCGGCTAAGGA...TCCACCATCATAGCTTTTGCTGTAGGGGGCCAGTACGTTCCTGGCAATGGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373963.5
ENST00000373966.5
ENST00000519698.1
CDS-3UTR GCA 90 bp GGACTAGGGGTGGGAGAAGTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCACCCTGGAGAAGGCGGTTaGGGCATTCAGCCACAGCAT +
Preference number: 4 (lower is better)
Translates to: GLGVGEVTFCLRIQSTLHPGEGG*GIQPQH
Trigger: ATGCTGTGGCTGAATGCCGCAACCGCCTTCTCCAGG...GTGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCACTTCTCCCACCCCTAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR GCA 90 bp CCAGCTCCTCCTGGATGGCTGTGGCAAGAATGGGGACTAGATGCATCTCTGTGTGTCTCCACACCGACTTaGTGGAAGCCCACCTGGCTG +
Preference number: 4 (lower is better)
Translates to: PAPPGWLWQEWGLDASLCVSTPT*WKPTWL
Trigger: CAGCCAGGTGGGCTTCCAGCAAGTCGGTGTGGAGAC...ACACAGAGATGCATCTAGTCCCCATTCTTGCCACAGCCATCCAGGAGGAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR GCA 90 bp AGGACTAGGGGTGGGAGAAGTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCAGTCTCCACACCGACTTaGTGGAAGCCCACCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RTRGGRSDLLLEDPVHPSVSTPT*WKPTWL
Trigger: CAGCCAGGTGGGCTTCCAGCAAGTCGGTGTGGAGAC...TGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCACTTCTCCCACCCCTAGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR GCA 90 bp GAAGCCATTGCCAGGAACGTACTGGCCCCCTACAGCAAAAGCTATGATGGTGGATCCACGTGCACCAGCTaGTGCTCCAGCCGACCTGAG +
Preference number: 4 (lower is better)
Translates to: EAIARNVLAPYSKSYDGGSTCTS*CSSRPE
Trigger: CTCAGGTCGGCTGGAGCAGCAGCTGGTGCACGTGGA...TCCACCATCATAGCTTTTGCTGTAGGGGGCCAGTACGTTCCTGGCAATGGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR GCA 90 bp GTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCACCCACTTCAGACATGGACTTCCACGTGCACCAGCTaGTGCTCCAGCCGACCTGAG +
Preference number: 4 (lower is better)
Translates to: VTFCLRIQSTLHPLQTWTSTCTS*CSSRPE
Trigger: CTCAGGTCGGCTGGAGCAGCAGCTGGTGCACGTGGA...AGTCCATGTCTGAAGTGGGTGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR GCA 90 bp GGTGGCCCAGTGCAGAACAGGATCTCTGAAGGCAGAGCGGGACACCCATTCTGGATGAGGACCGAATGGTaGCGCTCATCCACAGCATTG +
Preference number: 4 (lower is better)
Translates to: GGPVQNRISEGRAGHPFWMRTEW*RSSTAL
Trigger: CAATGCTGTGGATGAGCGGCACCATTCGGTCCTCAT...CCAGAATGGGTGTCCCGCTCTGCCTTCAGAGATCCTGTTCTGCACTGGGCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR GCA 90 bp GAAGGCAGAGCGGGACACCCATTCTGGGGATGGAAAGAGGGAAGACCGTTGAGGGCACAGAAGCAGCTGTaGAGATTGTCCAGCCGAGGA +
Preference number: 4 (lower is better)
Translates to: EGRAGHPFWGWKEGRPLRAQKQL*RLSSRG
Trigger: TCCTCGGCTGGACAATCTGCACAGCTGCTTCTGTGC...CCTCAACGGTCTTCCCTCTTTCCATCCCCAGAATGGGTGTCCCGCTCTGCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR GCA 90 bp GTCAGCAGTGACTGTGCTCCCTGTGCACTCTCAGACCCCACCTCTTCGTTGTCACAGGGAGCCAGGGCCTaGACAGGAATCTATCAAGGC +
Preference number: 4 (lower is better)
Translates to: VSSDCAPCALSDPTSSLSQGARA*TGIYQG
Trigger: GCCTTGATAGATTCCTGTGCAGGCCCTGGCTCCCTG...TGACAACGAAGAGGTGGGGTCTGAGAGTGCACAGGGAGCACAGTCACTGCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR GCA 90 bp AGGCTGAGATCCGCCGCAGCACCAGCTCTGTCAGCAGTGACTGTGCTCCCTGTGAGCATGGGCCATGTCTaGGCTGATCATGAAGGACTT +
Preference number: 4 (lower is better)
Translates to: RLRSAAAPALSAVTVLPVSMGHV*ADHEGL
Trigger: AAGTCCTTCATGATCAGCGCAGACATGGCCCATGCT...CACAGGGAGCACAGTCACTGCTGACAGAGCTGGTGCTGCGGCGGATCTCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR GCA 90 bp GGACTAGGGGTGGGAGAAGTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCACATCTCCCGGATAGAGTaGATGGCCAGTTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GLGVGEVTFCLRIQSTLHISRIE*MASWGL
Trigger: CAGCCCCCAACTGGCCATGCACTCTATCCGGGAGAT...GTGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCACTTCTCCCACCCCTAGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR GCA 90 bp TGGAGGACTAGGGGTGGGAGAAGTGACCTTCTGCTTGAGGATCCAGTCCACCCTACAGATGTGAGCCGCTaGACCCGGCCAGACTTTGAC +
Preference number: 4 (lower is better)
Translates to: WRTRGGRSDLLLEDPVHPTDVSR*TRPDFD
Trigger: GTCAAAGTCTGGCCGGGTGCAGCGGCTCACATCTGT...AGGGTGGACTGGATCCTCAAGCAGAAGGTCACTTCTCCCACCCCTAGTCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp ATCATAGGCACCACCCAAGACCGCAGGCTGGGTGTCTGCAAGGCAGAGCTCCATCATTCAGCCACAGCATaGAAAGGAGAGGGACTCCGG +
Preference number: 4 (lower is better)
Translates to: IIGTTQDRRLGVCKAELHHSATA*KGEGLR
Trigger: CCGGAGTCCCTCTCCTTTCCATGCTGTGGCTGAATG...ATGGAGCTCTGCCTTGCAGACACCCAGCCTGCGGTCTTGGGTGGTGCCTATGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373966.5
CDS-3UTR CCA 90 bp TGTCTGCCCAGAGCAGCTCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGAAGTCACTGAAGCCAGCCTaGAGAAGGCGGTTGCGGCAT +
Preference number: 4 (lower is better)
Translates to: CLPRAALKVAQCRTGSLKSLKPA*RRRLRH
Trigger: ATGCCGCAACCGCCTTCTCCAGGCTGGCTTCAGTGA...CTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAGAGCTGCTCTGGGCAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp CCAGGTGCTCCAGATCCCACCACCATAGGTCTCCACACCGACTTGCTGGAAGCCTTGCCAGGAACGTACTaGCCCCCTACAGCAAAAGCT +
Preference number: 4 (lower is better)
Translates to: PGAPDPTTIGLHTDLLEALPGTY*PPTAKA
Trigger: AGCTTTTGCTGTAGGGGGCCAGTACGTTCCTGGCAA...GGCTTCCAGCAAGTCGGTGTGGAGACCTATGGTGGTGGGATCTGGAGCACCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CCA 90 bp GGAGAAGGCGGTTGCGGCATTCAGCCACAGCATGGAAAGGAGAGGGACTCCGGTTTGCCAGGAACGTACTaGCCCCCTACAGCAAAAGCT +
Preference number: 4 (lower is better)
Translates to: GEGGCGIQPQHGKERDSGLPGTY*PPTAKA
Trigger: AGCTTTTGCTGTAGGGGGCCAGTACGTTCCTGGCAA...ACCGGAGTCCCTCTCCTTTCCATGCTGTGGCTGAATGCCGCAACCGCCTTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373966.5
ENST00000519698.1
CDS-3UTR CCA 90 bp CAAGCCAGGCTCAACTCCCACTCCTCTAGTCTCCAAATAAGCGTAGCACGGAGATCCACACCGACTTGCTaGAAGCCCACCTGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: QARLNSHSSSLQISVARRSTPTC*KPTWLR
Trigger: CCGCAGCCAGGTGGGCTTCCAGCAAGTCGGTGTGGA...TCTCCGTGCTACGCTTATTTGGAGACTAGAGGAGTGGGAGTTGAGCCTGGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp ACAGCATGGAAAGGAGAGGGACTCCGGTTCACGAACTTGAGGAGTTCCTTAGCCTCCACACCGACTTGCTaGAAGCCCACCTGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: TAWKGEGLRFTNLRSSLASTPTC*KPTWLR
Trigger: CCGCAGCCAGGTGGGCTTCCAGCAAGTCGGTGTGGA...GGCTAAGGAACTCCTCAAGTTCGTGAACCGGAGTCCCTCTCCTTTCCATGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373966.5
CDS-3UTR CCA 90 bp GAGGGTCTGGAGGACTCCTGTGGTGCAGGCCATCTCCCGGATAGAGTGCATGGCTGGCTGTGGCAAGAATaGGGACTAGATGCATCTCTG +
Preference number: 4 (lower is better)
Translates to: EGLEDSCGAGHLPDRVHGWLWQE*GLDASL
Trigger: CAGAGATGCATCTAGTCCCCATTCTTGCCACAGCCA...GCCATGCACTCTATCCGGGAGATGGCCTGCACCACAGGAGTCCTCCAGACCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CCA 90 bp CAGAGCAGGGACATGAGGACCGAATGGTGCCGCTCATCCACAGCATTGAGAGGCGACATGAGGACCGAATaGTGCCGCTCATCCACAGCA +
Preference number: 4 (lower is better)
Translates to: QSRDMRTEWCRSSTALRGDMRTE*CRSSTA
Trigger: TGCTGTGGATGAGCGGCACCATTCGGTCCTCATGTC...GCCTCTCAATGCTGTGGATGAGCGGCACCATTCGGTCCTCATGTCCCTGCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CCA 90 bp GGACTAGGGGTGGGAGAAGTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCACTCTCCACTATGTCCTTaGGGCTCAGCCCCAGATGGG +
Preference number: 4 (lower is better)
Translates to: GLGVGEVTFCLRIQSTLHSPLCP*GSAPDG
Trigger: CCCATCTGGGGCTGAGCCCCAAGGACATAGTGGAGA...GTGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCACTTCTCCCACCCCTAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp TGTCTGCCCAGAGCAGCTCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGAAGTCTCCACTATGTCCTTaGGGCTCAGCCCCAGATGGG +
Preference number: 4 (lower is better)
Translates to: CLPRAALKVAQCRTGSLKSPLCP*GSAPDG
Trigger: CCCATCTGGGGCTGAGCCCCAAGGACATAGTGGAGA...CTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAGAGCTGCTCTGGGCAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp TCGTTGATATTTCGCTGCAGATGGATGGCCAGGTGTGGGATGCGAAGAATGGGCCCCAAGACCGCAGGCTaGGTGTCTGCAAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: SLIFRCRWMARCGMRRMGPKTAG*VSARQS
Trigger: GCTCTGCCTTGCAGACACCCAGCCTGCGGTCTTGGG...GCCCATTCTTCGCATCCCACACCTGGCCATCCATCTGCAGCGAAATATCAACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CCA 90 bp CTGCTCCCCAACTTTTCTGGTTCCAAAGGTTCAAGCCAGGCTCAACTCCCACTCAAGGCTGTCGGGTGCTaGCACGAGGCTGAGATCCGC +
Preference number: 4 (lower is better)
Translates to: LLPNFSGSKGSSQAQLPLKAVGC*HEAEIR
Trigger: GCGGATCTCAGCCTCGTGCCAGCACCCGACAGCCTT...GAGTGGGAGTTGAGCCTGGCTTGAACCTTTGGAACCAGAAAAGTTGGGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp TCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGAAGGCAGAGCGGGACACCCAGCTTGTCCAGGTAGTTaGGATGCACAGCATGGGCCA +
Preference number: 4 (lower is better)
Translates to: SEGGPVQNRISEGRAGHPACPGS*DAQHGP
Trigger: TGGCCCATGCTGTGCATCCCAACTACCTGGACAAGC...TGGGTGTCCCGCTCTGCCTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp GCGCTGATCATGAAGGACTTGGGTATGGCTTCCTCGAAGGCTGTCGGGTGCTGGGCTTGTCCAGGTAGTTaGGATGCACAGCATGGGCCA +
Preference number: 4 (lower is better)
Translates to: ALIMKDLGMASSKAVGCWACPGS*DAQHGP
Trigger: TGGCCCATGCTGTGCATCCCAACTACCTGGACAAGC...CCAGCACCCGACAGCCTTCGAGGAAGCCATACCCAAGTCCTTCATGATCAGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CCA 90 bp AGGACTAGGGGTGGGAGAAGTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCATCTGGAGGACTCCTGTaGTGCAGGCCATCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: RTRGGRSDLLLEDPVHPSSGGLL*CRPSPG
Trigger: TCCGGGAGATGGCCTGCACCACAGGAGTCCTCCAGA...TGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCACTTCTCCCACCCCTAGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp AGTCAGGTCACGGTCAAACCAGGTGCTCCAGATCCCACCACCATAGGTCTCCACAAGAGGGTGAGGGTCTaGAGGACTCCTGTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: SQVTVKPGAPDPTTIGLHKRVRV*RTPVVQ
Trigger: CTGCACCACAGGAGTCCTCCAGACCCTCACCCTCTT...GTGGAGACCTATGGTGGTGGGATCTGGAGCACCTGGTTTGACCGTGACCTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CCA 90 bp TCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGAAGGCAGAGCGGGACACCCACCTCAGCCTCCGGAGTaGCTGAGATTACAGGCATGT +
Preference number: 4 (lower is better)
Translates to: SEGGPVQNRISEGRAGHPPQPPE*LRLQAC
Trigger: ACATGCCTGTAATCTCAGCCACTCCGGAGGCTGAGG...TGGGTGTCCCGCTCTGCCTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273075.9
CDS-3UTR CCA 90 bp CCGGTTCACGAACTTGAGGAGTTCCTTAGCCGCAGTCTGCACCGCCTCTTTGCGGGATCGAAATTCAAGTaGGGCCGTCGGGAGCCACTT +
Preference number: 4 (lower is better)
Translates to: PVHELEEFLSRSLHRLFAGSKFK*GRREPL
Trigger: AAGTGGCTCCCGACGGCCCCACTTGAATTTCGATCC...CGCAAAGAGGCGGTGCAGACTGCGGCTAAGGAACTCCTCAAGTTCGTGAACCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373966.5
3UTR CAA 72 bp ACAGCATGGGCCATGTCTGCGCTGATCATGAAGGACTaGGGTATGGCTTCCTCGAAGGCTGTCGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: TAWAMSALIMKD*GMASSKAVGCW
Trigger: CCAGCACCCGACAGCCTTCGAGGAAGCCATACCCAAGTCCTTCATGATCAGCGCAGACATGGCCCATGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR TCA 90 bp GTTCACGAACTTGAGGAGTTCCTTAGCCGCAGTCTGCACCGCCTCTTTGCGGGCAGGAGTTCCTGGTCATaGAGTACTTGCTCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: VHELEEFLSRSLHRLFAGRSSWS*STCSRA
Trigger: AGCCCGAGAGCAAGTACTTCATGACCAGGAACTCCT...GCCCGCAAAGAGGCGGTGCAGACTGCGGCTAAGGAACTCCTCAAGTTCGTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373966.5
ENST00000519698.1
CDS-3UTR TCA 90 bp ACTCCTGTGGTGCAGGCCATCTCCCGGATAGAGTGCATGGCCAGTTGGGGGCTGGCCCAAAGTTCTCGTTaGTATTTCGCTGCAGATGGA +
Preference number: 4 (lower is better)
Translates to: TPVVQAISRIECMASWGLAQSSR*YFAADG
Trigger: TCCATCTGCAGCGAAATATCAACGAGAACTTTGGGC...CAGCCCCCAACTGGCCATGCACTCTATCCGGGAGATGGCCTGCACCACAGGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR TCA 90 bp TCGTTGATATTTCGCTGCAGATGGATGGCCAGGTGTGGGATGCGAAGAATGGGCGCTCATCCACAGCATTaGGAGGCCCTGGCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: SLIFRCRWMARCGMRRMGAHPQH*EALAQE
Trigger: CTCCTGAGCCAGGGCCTCTCAATGCTGTGGATGAGC...GCCCATTCTTCGCATCCCACACCTGGCCATCCATCTGCAGCGAAATATCAACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR TCA 90 bp TGTCTGCCCAGAGCAGCTCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGAAGCGTTGTCATAGAGTGTaGCCATGCGCACGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: CLPRAALKVAQCRTGSLKRCHRV*PCAREA
Trigger: AGCCTCACGTGCGCATGGTCACACTCTATGACAACG...CTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAGAGCTGCTCTGGGCAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR TCA 90 bp AGGAGCAAAGATGAACTCATCATAGGCACCACCCAAGACCGCAGGCTGGGTGTCCAGCTCTGTCAGCAGTaGCTGTGCTCCCTGTGCACT +
Preference number: 4 (lower is better)
Translates to: RSKDELIIGTTQDRRLGVQLCQQ*LCSLCT
Trigger: AGTGCACAGGGAGCACAGTCACTGCTGACAGAGCTG...GACACCCAGCCTGCGGTCTTGGGTGGTGCCTATGATGAGTTCATCTTTGCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR TCA 90 bp GTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCACCCACTTCAGACATGGACTCCTGCAGGGGGACCTTaGCTTTGTTGGCCACCTCTC +
Preference number: 4 (lower is better)
Translates to: VTFCLRIQSTLHPLQTWTPAGGP*LCWPPL
Trigger: GAGAGGTGGCCAACAAAGTCAAGGTCCCCCTGCAGG...AGTCCATGTCTGAAGTGGGTGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR TCA 90 bp GTTGCGGCATTCAGCCACAGCATGGAAAGGAGAGGGACTCCGGTTCACGAACTTTGTCATTCCGGACCATaGGATCCTGCAGGGGGACCT +
Preference number: 4 (lower is better)
Translates to: VAAFSHSMERRGTPVHELCHSGP*DPAGGP
Trigger: AGGTCCCCCTGCAGGATCTCATGGTCCGGAATGACA...AAGTTCGTGAACCGGAGTCCCTCTCCTTTCCATGCTGTGGCTGAATGCCGCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373966.5
CDS-3UTR TCA 90 bp ATGGGCACAGAGCAGGGACATGAGGACCGAATGGTGCCGCTCATCCACAGCATTCAGCTTCAGCTCAGCTaGGAACTTCCCCTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: MGTEQGHEDRMVPLIHSIQLQLS*ELPLSG
Trigger: ACCTGAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTG...AATGCTGTGGATGAGCGGCACCATTCGGTCCTCATGTCCCTGCTCTGTGCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR TCA 90 bp CAAGCCAGGCTCAACTCCCACTCCTCTAGTCTCCAAATAAGCGTAGCACGGAGAGCAGAACAGGATCTCTaGAGGCAGAGCGGGACACCC +
Preference number: 4 (lower is better)
Translates to: QARLNSHSSSLQISVARRAEQDL*RQSGTP
Trigger: GGGTGTCCCGCTCTGCCTTCAGAGATCCTGTTCTGC...TCTCCGTGCTACGCTTATTTGGAGACTAGAGGAGTGGGAGTTGAGCCTGGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR TCA 90 bp CTGCTTGAGGATCCAGTCCACCCTTCACCCACTTCAGACATGGACTTGAGACAGGCAGAACAGGATCTCTaGAGGCAGAGCGGGACACCC +
Preference number: 4 (lower is better)
Translates to: LLEDPVHPSPTSDMDLRQAEQDL*RQSGTP
Trigger: GGGTGTCCCGCTCTGCCTTCAGAGATCCTGTTCTGC...CTGTCTCAAGTCCATGTCTGAAGTGGGTGAAGGGTGGACTGGATCCTCAAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR TCA 90 bp AGCAGCTCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGAAGGCAGAGCGGGAGGGATTTTGGGAGGGTaGGAAACAGCTTTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: SSSEGGPVQNRISEGRAGGILGG*ETALSA
Trigger: GGCAGACAAAGCTGTTTCTCACCCTCCCAAAATCCC...TCCCGCTCTGCCTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAGAGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR GCA 90 bp TTCAGCCACAGCATGGAAAGGAGAGGGACTCCGGTTCACGAACTTGAGGAGTTCGTCTCCACACCGACTTaGTGGAAGCCCACCTGGCTG +
Preference number: 4 (lower is better)
Translates to: FSHSMERRGTPVHELEEFVSTPT*WKPTWL
Trigger: CAGCCAGGTGGGCTTCCAGCAAGTCGGTGTGGAGAC...GAACTCCTCAAGTTCGTGAACCGGAGTCCCTCTCCTTTCCATGCTGTGGCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373966.5
CDS-3UTR GCA 90 bp TGTCTGCCCAGAGCAGCTCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGAAGCACGGTCAAACCAGGTaGTCCAGATCCCACCACCAT +
Preference number: 4 (lower is better)
Translates to: CLPRAALKVAQCRTGSLKHGQTR*SRSHHH
Trigger: ATGGTGGTGGGATCTGGAGCACCTGGTTTGACCGTG...CTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAGAGCTGCTCTGGGCAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR GCA 90 bp GGACTAGGGGTGGGAGAAGTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCACCACGGTCAAACCAGGTaGTCCAGATCCCACCACCAT +
Preference number: 4 (lower is better)
Translates to: GLGVGEVTFCLRIQSTLHHGQTR*SRSHHH
Trigger: ATGGTGGTGGGATCTGGAGCACCTGGTTTGACCGTG...GTGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCACTTCTCCCACCCCTAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR GCA 90 bp CACCACCCAAGACCGCAGGCTGGGTGTCTGCAAGGCAGAGCTCCATCTCCACTAAGAATGGGGACTAGATaGATCTCTGTGTTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: HHPRPQAGCLQGRAPSPLRMGTR*ISVLGP
Trigger: TGGGCCCAACACAGAGATGCATCTAGTCCCCATTCT...TAGTGGAGATGGAGCTCTGCCTTGCAGACACCCAGCCTGCGGTCTTGGGTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR GCA 90 bp CTGCTCCCCAACTTTTCTGGTTCCAAAGGTTCAAGCCAGGCTCAACTCCCACTCCGCAGGCTGGGTGTCTaGAAGGCAGAGCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: LLPNFSGSKGSSQAQLPLRRLGV*KAELHL
Trigger: GAGATGGAGCTCTGCCTTGCAGACACCCAGCCTGCG...GAGTGGGAGTTGAGCCTGGCTTGAACCTTTGGAACCAGAAAAGTTGGGGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR GCA 90 bp GTCAGCAGTGACTGTGCTCCCTGTGCACTCTCAGACCCCACCTCTTCGTTGTCAGCACAGAAGCAGCTGTaGAGATTGTCCAGCCGAGGA +
Preference number: 4 (lower is better)
Translates to: VSSDCAPCALSDPTSSLSAQKQL*RLSSRG
Trigger: TCCTCGGCTGGACAATCTGCACAGCTGCTTCTGTGC...TGACAACGAAGAGGTGGGGTCTGAGAGTGCACAGGGAGCACAGTCACTGCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR GCA 90 bp AGGACTAGGGGTGGGAGAAGTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCACAGGGAGCCAGGGCCTaGACAGGAATCTATCAAGGC +
Preference number: 4 (lower is better)
Translates to: RTRGGRSDLLLEDPVHPSQGARA*TGIYQG
Trigger: GCCTTGATAGATTCCTGTGCAGGCCCTGGCTCCCTG...TGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCACTTCTCCCACCCCTAGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR GCA 90 bp GGTGGCCCAGTGCAGAACAGGATCTCTGAAGGCAGAGCGGGACACCCATTCTGGAGCATGGGCCATGTCTaGGCTGATCATGAAGGACTT +
Preference number: 4 (lower is better)
Translates to: GGPVQNRISEGRAGHPFWSMGHV*ADHEGL
Trigger: AAGTCCTTCATGATCAGCGCAGACATGGCCCATGCT...CCAGAATGGGTGTCCCGCTCTGCCTTCAGAGATCCTGTTCTGCACTGGGCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR GCA 90 bp GGACTAGGGGTGGGAGAAGTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCACCGGACCATGAGATCCTaGAGGGGGACCTTGACTTTG +
Preference number: 4 (lower is better)
Translates to: GLGVGEVTFCLRIQSTLHRTMRS*RGTLTL
Trigger: CAAAGTCAAGGTCCCCCTGCAGGATCTCATGGTCCG...GTGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCACTTCTCCCACCCCTAGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR GCA 90 bp TCTGCCCAGAGCAGCTCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGAAGGCCTGAAGGTGGCCCAGTaGAGAACAGGATCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: SAQSSSEGGPVQNRISEGLKVAQ*RTGSLK
Trigger: CTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAG...GCCTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAGAGCTGCTCTGGGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp AGGACTAGGGGTGGGAGAAGTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCATCACTGAAGCCAGCCTaGAGAAGGCGGTTGCGGCAT +
Preference number: 4 (lower is better)
Translates to: RTRGGRSDLLLEDPVHPSSLKPA*RRRLRH
Trigger: ATGCCGCAACCGCCTTCTCCAGGCTGGCTTCAGTGA...TGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCACTTCTCCCACCCCTAGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp TCTCCAGCTCCTCCTGGATGGCTGTGGCAAGAATGGGGACTAGATGCATCTCTGATGGATGGCCAGGTGTaGGATGCGAAGAATGGGCCG +
Preference number: 4 (lower is better)
Translates to: SPAPPGWLWQEWGLDASLMDGQV*DAKNGP
Trigger: CGGCCCATTCTTCGCATCCCACACCTGGCCATCCAT...CAGAGATGCATCTAGTCCCCATTCTTGCCACAGCCATCCAGGAGGAGCTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CCA 90 bp CACCTCTTCGTTGTCATAGAGTGTGACCATGCGCACGTGAGGCTCTGTGGCCAGTTCGCTGCAGATGGATaGCCAGGTGTGGGATGCGAA +
Preference number: 4 (lower is better)
Translates to: HLFVVIECDHAHVRLCGQFAADG*PGVGCE
Trigger: TTCGCATCCCACACCTGGCCATCCATCTGCAGCGAA...CTGGCCACAGAGCCTCACGTGCGCATGGTCACACTCTATGACAACGAAGAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CCA 90 bp TGGAGGACTAGGGGTGGGAGAAGTGACCTTCTGCTTGAGGATCCAGTCCACCCTTTCGCTGCAGATGGATaGCCAGGTGTGGGATGCGAA +
Preference number: 4 (lower is better)
Translates to: WRTRGGRSDLLLEDPVHPFAADG*PGVGCE
Trigger: TTCGCATCCCACACCTGGCCATCCATCTGCAGCGAA...AGGGTGGACTGGATCCTCAAGCAGAAGGTCACTTCTCCCACCCCTAGTCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp ATCATAGGCACCACCCAAGACCGCAGGCTGGGTGTCTGCAAGGCAGAGCTCCATCCTCCTGGATGGCTGTaGCAAGAATGGGGACTAGAT +
Preference number: 4 (lower is better)
Translates to: IIGTTQDRRLGVCKAELHPPGWL*QEWGLD
Trigger: ATCTAGTCCCCATTCTTGCCACAGCCATCCAGGAGG...ATGGAGCTCTGCCTTGCAGACACCCAGCCTGCGGTCTTGGGTGGTGCCTATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CCA 90 bp TCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGAAGGCAGAGCGGGACACCCACCTCCTGGATGGCTGTaGCAAGAATGGGGACTAGAT +
Preference number: 4 (lower is better)
Translates to: SEGGPVQNRISEGRAGHPPPGWL*QEWGLD
Trigger: ATCTAGTCCCCATTCTTGCCACAGCCATCCAGGAGG...TGGGTGTCCCGCTCTGCCTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp CTTTGTCTGCCCAGAGCAGCTCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGGACATGAGGACCGAATaGTGCCGCTCATCCACAGCA +
Preference number: 4 (lower is better)
Translates to: LCLPRAALKVAQCRTGSLDMRTE*CRSSTA
Trigger: TGCTGTGGATGAGCGGCACCATTCGGTCCTCATGTC...CAGAGATCCTGTTCTGCACTGGGCCACCTTCAGAGCTGCTCTGGGCAGACAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp ATGTCTGCGCTGATCATGAAGGACTTGGGTATGGCTTCCTCGAAGGCTGTCGGGTCTCCACTATGTCCTTaGGGCTCAGCCCCAGATGGG +
Preference number: 4 (lower is better)
Translates to: MSALIMKDLGMASSKAVGSPLCP*GSAPDG
Trigger: CCCATCTGGGGCTGAGCCCCAAGGACATAGTGGAGA...CCCGACAGCCTTCGAGGAAGCCATACCCAAGTCCTTCATGATCAGCGCAGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CCA 90 bp GGACTAGGGGTGGGAGAAGTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCACTTGGGATGCACAGCATaGGCCATGTCTGCGCTGATC +
Preference number: 4 (lower is better)
Translates to: GLGVGEVTFCLRIQSTLHLGCTA*AMSALI
Trigger: GATCAGCGCAGACATGGCCCATGCTGTGCATCCCAA...GTGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCACTTCTCCCACCCCTAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp GTCCAGCCGAGGAGCAAAGATGAACTCATCATAGGCACCACCCAAGACCGCAGGGCTTGTCCAGGTAGTTaGGATGCACAGCATGGGCCA +
Preference number: 4 (lower is better)
Translates to: VQPRSKDELIIGTTQDRRACPGS*DAQHGP
Trigger: TGGCCCATGCTGTGCATCCCAACTACCTGGACAAGC...CCTGCGGTCTTGGGTGGTGCCTATGATGAGTTCATCTTTGCTCCTCGGCTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CCA 90 bp CTGCTTGAGGATCCAGTCCACCCTTCACCCACTTCAGACATGGACTTGAGACAGTCTGGAGGACTCCTGTaGTGCAGGCCATCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: LLEDPVHPSPTSDMDLRQSGGLL*CRPSPG
Trigger: TCCGGGAGATGGCCTGCACCACAGGAGTCCTCCAGA...CTGTCTCAAGTCCATGTCTGAAGTGGGTGAAGGGTGGACTGGATCCTCAAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp ACTCCTGTGGTGCAGGCCATCTCCCGGATAGAGTGCATGGCCAGTTGGGGGCTGTCAGGTGCAAAGGGATaGCAGAGAAGTCTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: TPVVQAISRIECMASWGLSGAKG*QRSLSK
Trigger: CTTGGAAAGACTTCTCTGCCATCCCTTTGCACCTGA...CAGCCCCCAACTGGCCATGCACTCTATCCGGGAGATGGCCTGCACCACAGGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CCA 90 bp CCGCAGCCCCAGCCGAGAAGCCAAGATAGGTCCAATGGTGGTTCCACAGGGGGTTCAGGTGCAAAGGGATaGCAGAGAAGTCTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: PQPQPRSQDRSNGGSTGGSGAKG*QRSLSK
Trigger: CTTGGAAAGACTTCTCTGCCATCCCTTTGCACCTGA...ACCCCCTGTGGAACCACCATTGGACCTATCTTGGCTTCTCGGCTGGGGCTGCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
3UTR CAA 72 bp TCCTTGAGTTCACTGAAGCCAGCCTGGAGAAGGCGGTaGCGGCATTCAGCCACAGCATGGAAAGGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: SLSSLKPAWRRR*RHSATAWKGEG
Trigger: TCCCTCTCCTTTCCATGCTGTGGCTGAATGCCGCAACCGCCTTCTCCAGGCTGGCTTCAGTGAACTCAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373966.5
ENST00000519698.1
CDS-3UTR TCA 90 bp GTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCACCCACTTCAGACATGGACTCTGCTCCAGCCGACCTaGGGTAGGGCACTTGACAAT +
Preference number: 4 (lower is better)
Translates to: VTFCLRIQSTLHPLQTWTLLQPT*GRALDN
Trigger: ATTGTCAAGTGCCCTACCTCAGGTCGGCTGGAGCAG...AGTCCATGTCTGAAGTGGGTGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR TCA 90 bp CTGCTTGAGGATCCAGTCCACCCTTCACCCACTTCAGACATGGACTTGAGACAGCAGCTCTGTCAGCAGTaGCTGTGCTCCCTGTGCACT +
Preference number: 4 (lower is better)
Translates to: LLEDPVHPSPTSDMDLRQQLCQQ*LCSLCT
Trigger: AGTGCACAGGGAGCACAGTCACTGCTGACAGAGCTG...CTGTCTCAAGTCCATGTCTGAAGTGGGTGAAGGGTGGACTGGATCCTCAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR TCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCGTGCTGGCACGAGGCTaGGATCCGCCGCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLVLARG*DPPQHQ
Trigger: CTGGTGCTGCGGCGGATCTCAGCCTCGTGCCAGCAC...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR TCA 90 bp AGTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCACCCACTTCAGACATGGACTGTCATTCCGGACCATaGGATCCTGCAGGGGGACCT +
Preference number: 4 (lower is better)
Translates to: SDLLLEDPVHPSPTSDMDCHSGP*DPAGGP
Trigger: AGGTCCCCCTGCAGGATCTCATGGTCCGGAATGACA...GTCCATGTCTGAAGTGGGTGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR TCA 90 bp ATGGGCCATGTCTGCGCTGATCATGAAGGACTTGGGTATGGCTTCCTCGAAGGCCAGCTTCAGCTCAGCTaGGAACTTCCCCTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: MGHVCADHEGLGYGFLEGQLQLS*ELPLSG
Trigger: ACCTGAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTG...GCCTTCGAGGAAGCCATACCCAAGTCCTTCATGATCAGCGCAGACATGGCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR TCA 90 bp GGACTAGGGGTGGGAGAAGTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCACGCTGGTCTTGAACTCTaGCCTCAAGTGATCCACCTG +
Preference number: 4 (lower is better)
Translates to: GLGVGEVTFCLRIQSTLHAGLEL*PQVIHL
Trigger: CAGGTGGATCACTTGAGGTCAGAGTTCAAGACCAGC...GTGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCACTTCTCCCACCCCTAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR TCA 90 bp GCTGAAGCCATTGCCAGGAACGTACTGGCCCCCTACAGCAAAAGCTATGATGGTTGTTGGGGACGAACATaGTGGAGAGGCTCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: AEAIARNVLAPYSKSYDGCWGRT*WRGSEP
Trigger: TGGCTCGGAGCCTCTCCATCATGTTCGTCCCCAACA...ACCATCATAGCTTTTGCTGTAGGGGGCCAGTACGTTCCTGGCAATGGCTTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000519698.1
CDS-3UTR GCA 90 bp GCTGAAGCCATTGCCAGGAACGTACTGGCCCCCTACAGCAAAAGCTATGATGGTTCTGCACCGCCTCTTTaGGGGCCTTACCGTTCATGG +
Preference number: 4 (lower is better)
Translates to: AEAIARNVLAPYSKSYDGSAPPL*GPYRSW
Trigger: CCATGAACGGTAAGGCCCGCAAAGAGGCGGTGCAGA...ACCATCATAGCTTTTGCTGTAGGGGGCCAGTACGTTCCTGGCAATGGCTTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373963.5
ENST00000373966.5
ENST00000519698.1
CDS-3UTR GCA 90 bp GAAGCCATTGCCAGGAACGTACTGGCCCCCTACAGCAAAAGCTATGATGGTGGACCTGGAGAAGGCGGTTaGGGCATTCAGCCACAGCAT +
Preference number: 4 (lower is better)
Translates to: EAIARNVLAPYSKSYDGGPGEGG*GIQPQH
Trigger: ATGCTGTGGCTGAATGCCGCAACCGCCTTCTCCAGG...TCCACCATCATAGCTTTTGCTGTAGGGGGCCAGTACGTTCCTGGCAATGGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373966.5
ENST00000519698.1
CDS-3UTR GCA 90 bp GGACTAGGGGTGGGAGAAGTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCACATGAGGACCGAATGGTaGCGCTCATCCACAGCATTG +
Preference number: 4 (lower is better)
Translates to: GLGVGEVTFCLRIQSTLHMRTEW*RSSTAL
Trigger: CAATGCTGTGGATGAGCGGCACCATTCGGTCCTCAT...GTGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCACTTCTCCCACCCCTAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR GCA 90 bp TCTCCAGCTCCTCCTGGATGGCTGTGGCAAGAATGGGGACTAGATGCATCTCTGGCACAGAAGCAGCTGTaGAGATTGTCCAGCCGAGGA +
Preference number: 4 (lower is better)
Translates to: SPAPPGWLWQEWGLDASLAQKQL*RLSSRG
Trigger: TCCTCGGCTGGACAATCTGCACAGCTGCTTCTGTGC...CAGAGATGCATCTAGTCCCCATTCTTGCCACAGCCATCCAGGAGGAGCTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR GCA 90 bp AGTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCACCCACTTCAGACATGGACCAGGGAGCCAGGGCCTaGACAGGAATCTATCAAGGC +
Preference number: 4 (lower is better)
Translates to: SDLLLEDPVHPSPTSDMDQGARA*TGIYQG
Trigger: GCCTTGATAGATTCCTGTGCAGGCCCTGGCTCCCTG...GTCCATGTCTGAAGTGGGTGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR GCA 90 bp ATCTCTGAAGGCAGAGCGGGACACCCATTCTGGGGATGGAAAGAGGGAAGACCGGGAGAAGTGACCTTCTaGTTGAGGATCCAGTCCACC +
Preference number: 4 (lower is better)
Translates to: ISEGRAGHPFWGWKEGRPGEVTF*LRIQST
Trigger: GGTGGACTGGATCCTCAAGCAGAAGGTCACTTCTCC...CGGTCTTCCCTCTTTCCATCCCCAGAATGGGTGTCCCGCTCTGCCTTCAGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR GCA 90 bp AGGCAGAGCGGGACACCCATTCTGGGGATGGAAAGAGGGAAGACCGTTGAGGCCCTTGGCCTCCCAAAATaGTGGGAATACAGATGTGAG +
Preference number: 4 (lower is better)
Translates to: RQSGTPILGMERGKTVEALGLPK*WEYRCE
Trigger: CTCACATCTGTATTCCCAGCATTTTGGGAGGCCAAG...GGCCTCAACGGTCTTCCCTCTTTCCATCCCCAGAATGGGTGTCCCGCTCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR GCA 90 bp GGACTAGGGGTGGGAGAAGTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCACTTGCCCAGGCTAGAGTaGAATGGCAGGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: GLGVGEVTFCLRIQSTLHLPRLE*NGRILA
Trigger: AGCCAAGATCCTGCCATTGCACTCTAGCCTGGGCAA...GTGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCACTTCTCCCACCCCTAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273075.9
CDS-3UTR CCA 90 bp TTCTCAGTCTCCTTGAGTTCACTGAAGCCAGCCTGGAGAAGGCGGTTGCGGCATCATTCAGCCACAGCATaGAAAGGAGAGGGACTCCGG +
Preference number: 4 (lower is better)
Translates to: FSVSLSSLKPAWRRRLRHHSATA*KGEGLR
Trigger: CCGGAGTCCCTCTCCTTTCCATGCTGTGGCTGAATG...ATGCCGCAACCGCCTTCTCCAGGCTGGCTTCAGTGAACTCAAGGAGACTGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373966.5
ENST00000519698.1
CDS-3UTR CCA 90 bp CTGATCATGAAGGACTTGGGTATGGCTTCCTCGAAGGCTGTCGGGTGCTGGCACTTGCCAGGAACGTACTaGCCCCCTACAGCAAAAGCT +
Preference number: 4 (lower is better)
Translates to: LIMKDLGMASSKAVGCWHLPGTY*PPTAKA
Trigger: AGCTTTTGCTGTAGGGGGCCAGTACGTTCCTGGCAA...GTGCCAGCACCCGACAGCCTTCGAGGAAGCCATACCCAAGTCCTTCATGATCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CCA 90 bp AGATTATGGCTTAGAGAAGGGAACAGCTCAAAGAAGCCCTTGAAGAGGGTGAGGCAGGGGCTGTCCGTGTaGGCCCCGATGAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: RLWLREGNSSKKPLKRVRQGLSV*APMRLK
Trigger: CTTCAGCCTCATCGGGGCCCACACGGACAGCCCCTG...CCTCACCCTCTTCAAGGGCTTCTTTGAGCTGTTCCCTTCTCTAAGCCATAATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CCA 90 bp AGTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCACCCACTTCAGACATGGACATGGATGGCCAGGTGTaGGATGCGAAGAATGGGCCG +
Preference number: 4 (lower is better)
Translates to: SDLLLEDPVHPSPTSDMDMDGQV*DAKNGP
Trigger: CGGCCCATTCTTCGCATCCCACACCTGGCCATCCAT...GTCCATGTCTGAAGTGGGTGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp GTCCAGGTAGTTGGGATGCACAGCATGGGCCATGTCTGCGCTGATCATGAAGGATTCGCTGCAGATGGATaGCCAGGTGTGGGATGCGAA +
Preference number: 4 (lower is better)
Translates to: VQVVGMHSMGHVCADHEGFAADG*PGVGCE
Trigger: TTCGCATCCCACACCTGGCCATCCATCTGCAGCGAA...TCCTTCATGATCAGCGCAGACATGGCCCATGCTGTGCATCCCAACTACCTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CCA 90 bp GAAGGCAGAGCGGGACACCCATTCTGGGGATGGAAAGAGGGAAGACCGTTGAGGATATTTCGCTGCAGATaGATGGCCAGGTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: EGRAGHPFWGWKEGRPLRIFRCR*MARCGM
Trigger: CATCCCACACCTGGCCATCCATCTGCAGCGAAATAT...CCTCAACGGTCTTCCCTCTTTCCATCCCCAGAATGGGTGTCCCGCTCTGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp TCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGAAGGCAGAGCGGGACACCCATGGCTGTGGCAAGAATaGGGACTAGATGCATCTCTG +
Preference number: 4 (lower is better)
Translates to: SEGGPVQNRISEGRAGHPWLWQE*GLDASL
Trigger: CAGAGATGCATCTAGTCCCCATTCTTGCCACAGCCA...TGGGTGTCCCGCTCTGCCTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp CCAGCTCCTCCTGGATGGCTGTGGCAAGAATGGGGACTAGATGCATCTCTGTGTTTGGGATGCACAGCATaGGCCATGTCTGCGCTGATC +
Preference number: 4 (lower is better)
Translates to: PAPPGWLWQEWGLDASLCLGCTA*AMSALI
Trigger: GATCAGCGCAGACATGGCCCATGCTGTGCATCCCAA...ACACAGAGATGCATCTAGTCCCCATTCTTGCCACAGCCATCCAGGAGGAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CCA 90 bp GAAGGCAGAGCGGGACACCCATTCTGGGGATGGAAAGAGGGAAGACCGTTGAGGTGGAATAAAGGCCGGTaGTTCTCCTCATGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: EGRAGHPFWGWKEGRPLRWNKGR*FSSCLS
Trigger: GGACAAGCATGAGGAGAACCACCGGCCTTTATTCCA...CCTCAACGGTCTTCCCTCTTTCCATCCCCAGAATGGGTGTCCCGCTCTGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp TCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGAAGGCAGAGCGGGACACCCATGGAATAAAGGCCGGTaGTTCTCCTCATGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: SEGGPVQNRISEGRAGHPWNKGR*FSSCLS
Trigger: GGACAAGCATGAGGAGAACCACCGGCCTTTATTCCA...TGGGTGTCCCGCTCTGCCTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp AGGACTAGGGGTGGGAGAAGTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCAATCACGGGGCCCTTGTaGAATAAAGGCCGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: RTRGGRSDLLLEDPVHPSITGPL*NKGRWF
Trigger: GAACCACCGGCCTTTATTCCACAAGGGCCCCGTGAT...TGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCACTTCTCCCACCCCTAGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp GAAGCCATTGCCAGGAACGTACTGGCCCCCTACAGCAAAAGCTATGATGGTGGAAAGAGGGTGAGGGTCTaGAGGACTCCTGTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: EAIARNVLAPYSKSYDGGKRVRV*RTPVVQ
Trigger: CTGCACCACAGGAGTCCTCCAGACCCTCACCCTCTT...TCCACCATCATAGCTTTTGCTGTAGGGGGCCAGTACGTTCCTGGCAATGGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CCA 90 bp CTGCTCCCCAACTTTTCTGGTTCCAAAGGTTCAAGCCAGGCTCAACTCCCACTCAAGAGGGTGAGGGTCTaGAGGACTCCTGTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: LLPNFSGSKGSSQAQLPLKRVRV*RTPVVQ
Trigger: CTGCACCACAGGAGTCCTCCAGACCCTCACCCTCTT...GAGTGGGAGTTGAGCCTGGCTTGAACCTTTGGAACCAGAAAAGTTGGGGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp CTGCTTGAGGATCCAGTCCACCCTTCACCCACTTCAGACATGGACTTGAGACAGGCTCCTGAGAGGGGATaGGAAGGGATTTTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: LLEDPVHPSPTSDMDLRQAPERG*EGILGG
Trigger: CCCTCCCAAAATCCCTTCCCATCCCCTCTCAGGAGC...CTGTCTCAAGTCCATGTCTGAAGTGGGTGAAGGGTGGACTGGATCCTCAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp GTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCACCCACTTCAGACATGGACTCAGCCTCTGCCTCCCTaGCTCAAGCTATTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: VTFCLRIQSTLHPLQTWTQPLPP*LKLFSC
Trigger: GCAGGAGAATAGCTTGAGCCAGGGAGGCAGAGGCTG...AGTCCATGTCTGAAGTGGGTGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273075.9
CDS-3UTR TCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCGTGACCATGCGCACGTaGGGCTCTGTGGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLVTMRT*GSVARE
Trigger: CTCCCTGGCCACAGAGCCTCACGTGCGCATGGTCAC...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR TCA 90 bp CTGCTTGAGGATCCAGTCCACCCTTCACCCACTTCAGACATGGACTTGAGACAGCAGCTTCAGCTCAGCTaGGAACTTCCCCTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: LLEDPVHPSPTSDMDLRQQLQLS*ELPLSG
Trigger: ACCTGAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTG...CTGTCTCAAGTCCATGTCTGAAGTGGGTGAAGGGTGGACTGGATCCTCAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR TCA 90 bp CAAGCCAGGCTCAACTCCCACTCCTCTAGTCTCCAAATAAGCGTAGCACGGAGAAAGAGGGAAGACCGTTaGGGCCATTTCCCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: QARLNSHSSSLQISVARRKREDR*GHFPGG
Trigger: TCCACCTGGGAAATGGCCTCAACGGTCTTCCCTCTT...TCTCCGTGCTACGCTTATTTGGAGACTAGAGGAGTGGGAGTTGAGCCTGGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR TCA 90 bp TGTCTGCCCAGAGCAGCTCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGAAGAATACCAGGGACTGCTaGGAAGTGGATGATGAAGGG +
Preference number: 4 (lower is better)
Translates to: CLPRAALKVAQCRTGSLKNTRDC*EVDDEG
Trigger: CCCTTCATCATCCACTTCTCAGCAGTCCCTGGTATT...CTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAGAGCTGCTCTGGGCAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR GCA 90 bp TGTCTGCCCAGAGCAGCTCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGAAGAGAATGGGGACTAGATaGATCTCTGTGTTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: CLPRAALKVAQCRTGSLKRMGTR*ISVLGP
Trigger: TGGGCCCAACACAGAGATGCATCTAGTCCCCATTCT...CTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAGAGCTGCTCTGGGCAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR GCA 90 bp AGGACTAGGGGTGGGAGAAGTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCAGAATCTATCAAGGCCTaGAGGGCACAGAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: RTRGGRSDLLLEDPVHPSESIKA*RAQKQL
Trigger: CAGCTGCTTCTGTGCCCTGCAGGCCTTGATAGATTC...TGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCACTTCTCCCACCCCTAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR GCA 90 bp AAGGTTCAAGCCAGGCTCAACTCCCACTCCTCTAGTCTCCAAATAAGCGTAGCATCGAAGGCTGTCGGGTaGTGGCACGAGGCTGAGATC +
Preference number: 4 (lower is better)
Translates to: KVQARLNSHSSSLQISVASKAVG*WHEAEI
Trigger: GATCTCAGCCTCGTGCCAGCACCCGACAGCCTTCGA...TGCTACGCTTATTTGGAGACTAGAGGAGTGGGAGTTGAGCCTGGCTTGAACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR GCA 90 bp CATTCAGCCACAGCATGGAAAGGAGAGGGACTCCGGTTCACGAACTTGAGGAGTCGGACCATGAGATCCTaGAGGGGGACCTTGACTTTG +
Preference number: 4 (lower is better)
Translates to: HSATAWKGEGLRFTNLRSRTMRS*RGTLTL
Trigger: CAAAGTCAAGGTCCCCCTGCAGGATCTCATGGTCCG...ACTCCTCAAGTTCGTGAACCGGAGTCCCTCTCCTTTCCATGCTGTGGCTGAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373966.5
CDS-3UTR GCA 90 bp CTGCTTGAGGATCCAGTCCACCCTTCACCCACTTCAGACATGGACTTGAGACAGCTCAAGCTATTCTCCTaGCTCAGCCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: LLEDPVHPSPTSDMDLRQLKLFS*LSLPSS
Trigger: GCTACTCGGGAGGCTGAGGCAGGAGAATAGCTTGAG...CTGTCTCAAGTCCATGTCTGAAGTGGGTGAAGGGTGGACTGGATCCTCAAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273075.9
CDS-3UTR CCA 90 bp CTGCTCCCCAACTTTTCTGGTTCCAAAGGTTCAAGCCAGGCTCAACTCCCACTCCATTCAGCCACAGCATaGAAAGGAGAGGGACTCCGG +
Preference number: 4 (lower is better)
Translates to: LLPNFSGSKGSSQAQLPLHSATA*KGEGLR
Trigger: CCGGAGTCCCTCTCCTTTCCATGCTGTGGCTGAATG...GAGTGGGAGTTGAGCCTGGCTTGAACCTTTGGAACCAGAAAAGTTGGGGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCCAGGGGCTGTCCGTGTaGGCCCCGATGAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLQGLSV*APMRLK
Trigger: CTTCAGCCTCATCGGGGCCCACACGGACAGCCCCTG...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR CCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCTGCTGGAAGCCCACCTaGCTGCGGCGAGACCGACGT +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLCWKPT*LRRDRR
Trigger: ACGTCGGTCTCGCCGCAGCCAGGTGGGCTTCCAGCA...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR CCA 90 bp AGATTATGGCTTAGAGAAGGGAACAGCTCAAAGAAGCCCTTGAAGAGGGTGAGGTCCACACCGACTTGCTaGAAGCCCACCTGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: RLWLREGNSSKKPLKRVRSTPTC*KPTWLR
Trigger: CCGCAGCCAGGTGGGCTTCCAGCAAGTCGGTGTGGA...CCTCACCCTCTTCAAGGGCTTCTTTGAGCTGTTCCCTTCTCTAAGCCATAATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CCA 90 bp CTTTGTCTGCCCAGAGCAGCTCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGTGGCTGTGGCAAGAATaGGGACTAGATGCATCTCTG +
Preference number: 4 (lower is better)
Translates to: LCLPRAALKVAQCRTGSLWLWQE*GLDASL
Trigger: CAGAGATGCATCTAGTCCCCATTCTTGCCACAGCCA...CAGAGATCCTGTTCTGCACTGGGCCACCTTCAGAGCTGCTCTGGGCAGACAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp CTGTGCACTCTCAGACCCCACCTCTTCGTTGTCATAGAGTGTGACCATGCGCACCCTCCTGGATGGCTGTaGCAAGAATGGGGACTAGAT +
Preference number: 4 (lower is better)
Translates to: LCTLRPHLFVVIECDHAHPPGWL*QEWGLD
Trigger: ATCTAGTCCCCATTCTTGCCACAGCCATCCAGGAGG...GTGCGCATGGTCACACTCTATGACAACGAAGAGGTGGGGTCTGAGAGTGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CCA 90 bp AGTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCACCCACTTCAGACATGGACTTGGGATGCACAGCATaGGCCATGTCTGCGCTGATC +
Preference number: 4 (lower is better)
Translates to: SDLLLEDPVHPSPTSDMDLGCTA*AMSALI
Trigger: GATCAGCGCAGACATGGCCCATGCTGTGCATCCCAA...GTCCATGTCTGAAGTGGGTGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp CTGCTTGAGGATCCAGTCCACCCTTCACCCACTTCAGACATGGACTTGAGACAGGCTTGTCCAGGTAGTTaGGATGCACAGCATGGGCCA +
Preference number: 4 (lower is better)
Translates to: LLEDPVHPSPTSDMDLRQACPGS*DAQHGP
Trigger: TGGCCCATGCTGTGCATCCCAACTACCTGGACAAGC...CTGTCTCAAGTCCATGTCTGAAGTGGGTGAAGGGTGGACTGGATCCTCAAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp CATTCAGCCACAGCATGGAAAGGAGAGGGACTCCGGTTCACGAACTTGAGGAGTATCACGGGGCCCTTGTaGAATAAAGGCCGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: HSATAWKGEGLRFTNLRSITGPL*NKGRWF
Trigger: GAACCACCGGCCTTTATTCCACAAGGGCCCCGTGAT...ACTCCTCAAGTTCGTGAACCGGAGTCCCTCTCCTTTCCATGCTGTGGCTGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373966.5
CDS-3UTR CCA 90 bp TCTGCCCAGAGCAGCTCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGAAGGCTCAGGTGCAAAGGGATaGCAGAGAAGTCTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: SAQSSSEGGPVQNRISEGSGAKG*QRSLSK
Trigger: CTTGGAAAGACTTCTCTGCCATCCCTTTGCACCTGA...GCCTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAGAGCTGCTCTGGGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp GTTCAAGCCAGGCTCAACTCCCACTCCTCTAGTCTCCAAATAAGCGTAGCACGGGCGGGACACCCATTCTaGGGATGGAAAGAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: VQARLNSHSSSLQISVARAGHPF*GWKEGR
Trigger: TCTTCCCTCTTTCCATCCCCAGAATGGGTGTCCCGC...CCGTGCTACGCTTATTTGGAGACTAGAGGAGTGGGAGTTGAGCCTGGCTTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCGGGCCTTACCGTTCATaGCCACCGGGTCCGACGGGT +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLGPYRS*PPGPTG
Trigger: ACCCGTCGGACCCGGTGGCCATGAACGGTAAGGCCC...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373972.5
CDS-3UTR CCA 90 bp AAGGTTCAAGCCAGGCTCAACTCCCACTCCTCTAGTCTCCAAATAAGCGTAGCACTTTCGGTTTCGCTTTaGGTCAGGCGGCCCCACTGC +
Preference number: 4 (lower is better)
Translates to: KVQARLNSHSSSLQISVALSVSL*VRRPHC
Trigger: GCAGTGGGGCCGCCTGACCCAAAGCGAAACCGAAAG...TGCTACGCTTATTTGGAGACTAGAGGAGTGGGAGTTGAGCCTGGCTTGAACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520694.6
CDS-3UTR TCA 90 bp TGTCTGCCCAGAGCAGCTCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGAAGGCCCAAAGTTCTCGTTaGTATTTCGCTGCAGATGGA +
Preference number: 4 (lower is better)
Translates to: CLPRAALKVAQCRTGSLKAQSSR*YFAADG
Trigger: TCCATCTGCAGCGAAATATCAACGAGAACTTTGGGC...CTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAGAGCTGCTCTGGGCAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR TCA 90 bp TATAATGTTTTGAAGGTACTCCTTGTCCTGTGTCCAGTTCTGCAACCTGCCTTTGTGCTGGCACGAGGCTaGGATCCGCCGCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: YNVLKVLLVLCPVLQPAFVLARG*DPPQHQ
Trigger: CTGGTGCTGCGGCGGATCTCAGCCTCGTGCCAGCAC...AAAGGCAGGTTGCAGAACTGGACACAGGACAAGGAGTACCTTCAAAACATTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273075.9
CDS-3UTR GCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCTCCTTAGCCGCAGTCTaGACCGCCTCTTTGCGGGCC +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLSLAAV*TASLRA
Trigger: GGCCCGCAAAGAGGCGGTGCAGACTGCGGCTAAGGA...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR GCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCGGAAGCCCACCTGGCTaGGGCGAGACCGACGTTTCA +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLGSPPG*GETDVS
Trigger: TGAAACGTCGGTCTCGCCGCAGCCAGGTGGGCTTCC...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR GCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCTCCACGTGCACCAGCTaGTGCTCCAGCCGACCTGAG +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLSTCTS*CSSRPE
Trigger: CTCAGGTCGGCTGGAGCAGCAGCTGGTGCACGTGGA...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR GCA 90 bp AGCCAGAGTCAGGTCACGGTCAAACCAGGTGCTCCAGATCCCACCACCATAGGTTCGTTGATATTTCGCTaGAGATGGATGGCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: SQSQVTVKPGAPDPTTIGSLIFR*RWMARC
Trigger: ACACCTGGCCATCCATCTGCAGCGAAATATCAACGA...ACCTATGGTGGTGGGATCTGGAGCACCTGGTTTGACCGTGACCTGACTCTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR GCA 90 bp AGGACTAGGGGTGGGAGAAGTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCAAGAATGGGGACTAGATaGATCTCTGTGTTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: RTRGGRSDLLLEDPVHPSRMGTR*ISVLGP
Trigger: TGGGCCCAACACAGAGATGCATCTAGTCCCCATTCT...TGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCACTTCTCCCACCCCTAGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR GCA 90 bp ATGCACAGCATGGGCCATGTCTGCGCTGATCATGAAGGACTTGGGTATGGCTTCGAATCTATCAAGGCCTaGAGGGCACAGAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: MHSMGHVCADHEGLGYGFESIKA*RAQKQL
Trigger: CAGCTGCTTCTGTGCCCTGCAGGCCTTGATAGATTC...GAAGCCATACCCAAGTCCTTCATGATCAGCGCAGACATGGCCCATGCTGTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR GCA 90 bp GTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCACCCACTTCAGACATGGACTGAATCTATCAAGGCCTaGAGGGCACAGAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: VTFCLRIQSTLHPLQTWTESIKA*RAQKQL
Trigger: CAGCTGCTTCTGTGCCCTGCAGGCCTTGATAGATTC...AGTCCATGTCTGAAGTGGGTGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR GCA 90 bp AGGAGCAAAGATGAACTCATCATAGGCACCACCCAAGACCGCAGGCTGGGTGTCAGCATGGGCCATGTCTaGGCTGATCATGAAGGACTT +
Preference number: 4 (lower is better)
Translates to: RSKDELIIGTTQDRRLGVSMGHV*ADHEGL
Trigger: AAGTCCTTCATGATCAGCGCAGACATGGCCCATGCT...GACACCCAGCCTGCGGTCTTGGGTGGTGCCTATGATGAGTTCATCTTTGCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR GCA 90 bp AGTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCACCCACTTCAGACATGGACCTGAAGGTGGCCCAGTaGAGAACAGGATCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: SDLLLEDPVHPSPTSDMDLKVAQ*RTGSLK
Trigger: CTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAG...GTCCATGTCTGAAGTGGGTGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCTCCACACCGACTTGCTaGAAGCCCACCTGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLSTPTC*KPTWLR
Trigger: CCGCAGCCAGGTGGGCTTCCAGCAAGTCGGTGTGGA...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR CCA 90 bp CTGCTCCCCAACTTTTCTGGTTCCAAAGGTTCAAGCCAGGCTCAACTCCCACTCCCTCCTGGATGGCTGTaGCAAGAATGGGGACTAGAT +
Preference number: 4 (lower is better)
Translates to: LLPNFSGSKGSSQAQLPLPPGWL*QEWGLD
Trigger: ATCTAGTCCCCATTCTTGCCACAGCCATCCAGGAGG...GAGTGGGAGTTGAGCCTGGCTTGAACCTTTGGAACCAGAAAAGTTGGGGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCCCCAAGACCGCAGGCTaGGTGTCTGCAAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLPKTAG*VSARQS
Trigger: GCTCTGCCTTGCAGACACCCAGCCTGCGGTCTTGGG...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR CCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCAAGGCTGTCGGGTGCTaGCACGAGGCTGAGATCCGC +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLKAVGC*HEAEIR
Trigger: GCGGATCTCAGCCTCGTGCCAGCACCCGACAGCCTT...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR CCA 90 bp CACCACCCAAGACCGCAGGCTGGGTGTCTGCAAGGCAGAGCTCCATCTCCACTATCCACTAAGAGATTATaGCTTAGAGAAGGGAACAGC +
Preference number: 4 (lower is better)
Translates to: HHPRPQAGCLQGRAPSPLSTKRL*LREGNS
Trigger: GCTGTTCCCTTCTCTAAGCCATAATCTCTTAGTGGA...TAGTGGAGATGGAGCTCTGCCTTGCAGACACCCAGCCTGCGGTCTTGGGTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CCA 90 bp AGTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCACCCACTTCAGACATGGACCACCCATTCTGGGGATaGAAAGAGGGAAGACCGTTG +
Preference number: 4 (lower is better)
Translates to: SDLLLEDPVHPSPTSDMDHPFWG*KEGRPL
Trigger: CAACGGTCTTCCCTCTTTCCATCCCCAGAATGGGTG...GTCCATGTCTGAAGTGGGTGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp TGTCTGCCCAGAGCAGCTCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGAAGGGGACTGCTGAGAAGTaGATGATGAAGGGTGATAAG +
Preference number: 4 (lower is better)
Translates to: CLPRAALKVAQCRTGSLKGTAEK*MMKGDK
Trigger: CTTATCACCCTTCATCATCCACTTCTCAGCAGTCCC...CTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAGAGCTGCTCTGGGCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp AGATTATGGCTTAGAGAAGGGAACAGCTCAAAGAAGCCCTTGAAGAGGGTGAGGGCGCCGGACCCGGTCTaGGATCGAAATTCAAGTGGG +
Preference number: 4 (lower is better)
Translates to: RLWLREGNSSKKPLKRVRAPDPV*DRNSSG
Trigger: CCCACTTGAATTTCGATCCCAGACCGGGTCCGGCGC...CCTCACCCTCTTCAAGGGCTTCTTTGAGCTGTTCCCTTCTCTAAGCCATAATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373966.5
CDS-3UTR CCA 90 bp GCTGAAGCCATTGCCAGGAACGTACTGGCCCCCTACAGCAAAAGCTATGATGGTGGGCCTTACCGTTCATaGCCACCTGAAACTCCTGAT +
Preference number: 4 (lower is better)
Translates to: AEAIARNVLAPYSKSYDGGPYRS*PPETPD
Trigger: ATCAGGAGTTTCAGGTGGCCATGAACGGTAAGGCCC...ACCATCATAGCTTTTGCTGTAGGGGGCCAGTACGTTCCTGGCAATGGCTTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519698.1
CDS-3UTR TCA 90 bp ATGTCTGCGCTGATCATGAAGGACTTGGGTATGGCTTCCTCGAAGGCTGTCGGGGCCCAAAGTTCTCGTTaGTATTTCGCTGCAGATGGA +
Preference number: 4 (lower is better)
Translates to: MSALIMKDLGMASSKAVGAQSSR*YFAADG
Trigger: TCCATCTGCAGCGAAATATCAACGAGAACTTTGGGC...CCCGACAGCCTTCGAGGAAGCCATACCCAAGTCCTTCATGATCAGCGCAGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR TCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCGCTCATCCACAGCATTaGGAGGCCCTGGCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLAHPQH*EALAQE
Trigger: CTCCTGAGCCAGGGCCTCTCAATGCTGTGGATGAGC...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR TCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCCACAGAGCAGGGACATaGGGACCGAATGGTGCCGCT +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLHRAGT*GPNGAA
Trigger: AGCGGCACCATTCGGTCCTCATGTCCCTGCTCTGTG...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR TCA 90 bp AAGGTTCAAGCCAGGCTCAACTCCCACTCCTCTAGTCTCCAAATAAGCGTAGCACGTTGTCATAGAGTGTaGCCATGCGCACGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: KVQARLNSHSSSLQISVARCHRV*PCAREA
Trigger: AGCCTCACGTGCGCATGGTCACACTCTATGACAACG...TGCTACGCTTATTTGGAGACTAGAGGAGTGGGAGTTGAGCCTGGCTTGAACCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR TCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCCCTGCAGGGGGACCTTaGCTTTGTTGGCCACCTCTC +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLPAGGP*LCWPPL
Trigger: GAGAGGTGGCCAACAAAGTCAAGGTCCCCCTGCAGG...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR TCA 90 bp AGTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCACCCACTTCAGACATGGACAATACCAGGGACTGCTaGGAAGTGGATGATGAAGGG +
Preference number: 4 (lower is better)
Translates to: SDLLLEDPVHPSPTSDMDNTRDC*EVDDEG
Trigger: CCCTTCATCATCCACTTCTCAGCAGTCCCTGGTATT...GTCCATGTCTGAAGTGGGTGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR TCA 90 bp GTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCACCCACTTCAGACATGGACTTGGCAAGGCTGGTCTTaGACTCTGACCTCAAGTGAT +
Preference number: 4 (lower is better)
Translates to: VTFCLRIQSTLHPLQTWTWQGWS*TLTSSD
Trigger: ATCACTTGAGGTCAGAGTTCAAGACCAGCCTTGCCA...AGTCCATGTCTGAAGTGGGTGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR TCA 90 bp AGGACTAGGGGTGGGAGAAGTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCAAGTCTCCTGAATAGCTaGGATTACAGGTGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: RTRGGRSDLLLEDPVHPSSLLNS*DYRCVP
Trigger: TGGCACACACCTGTAATCTCAGCTATTCAGGAGACT...TGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCACTTCTCCCACCCCTAGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273075.9
CDS-3UTR GCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCGTCTCCACACCGACTTaGTGGAAGCCCACCTGGCTG +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLVSTPT*WKPTWL
Trigger: CAGCCAGGTGGGCTTCCAGCAAGTCGGTGTGGAGAC...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR GCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCTGGCCAGGTGTGGGATaGGAAGAATGGGCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLWPGVG*EEWAAP
Trigger: TGGAGCGGCCCATTCTTCGCATCCCACACCTGGCCA...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR GCA 90 bp AGGAGCAAAGATGAACTCATCATAGGCACCACCCAAGACCGCAGGCTGGGTGTCTCGTTGATATTTCGCTaGAGATGGATGGCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: RSKDELIIGTTQDRRLGVSLIFR*RWMARC
Trigger: ACACCTGGCCATCCATCTGCAGCGAAATATCAACGA...GACACCCAGCCTGCGGTCTTGGGTGGTGCCTATGATGAGTTCATCTTTGCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR GCA 90 bp ACAGCATGGAAAGGAGAGGGACTCCGGTTCACGAACTTGAGGAGTTCCTTAGCCAGAATGGGGACTAGATaGATCTCTGTGTTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: TAWKGEGLRFTNLRSSLARMGTR*ISVLGP
Trigger: TGGGCCCAACACAGAGATGCATCTAGTCCCCATTCT...GGCTAAGGAACTCCTCAAGTTCGTGAACCGGAGTCCCTCTCCTTTCCATGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373966.5
CDS-3UTR GCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCCGCAGGCTGGGTGTCTaGAAGGCAGAGCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLRRLGV*KAELHL
Trigger: GAGATGGAGCTCTGCCTTGCAGACACCCAGCCTGCG...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR GCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCTCGAAGGCTGTCGGGTaGTGGCACGAGGCTGAGATC +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLSKAVG*WHEAEI
Trigger: GATCTCAGCCTCGTGCCAGCACCCGACAGCCTTCGA...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR GCA 90 bp AAGGTTCAAGCCAGGCTCAACTCCCACTCCTCTAGTCTCCAAATAAGCGTAGCACGGACCATGAGATCCTaGAGGGGGACCTTGACTTTG +
Preference number: 4 (lower is better)
Translates to: KVQARLNSHSSSLQISVARTMRS*RGTLTL
Trigger: CAAAGTCAAGGTCCCCCTGCAGGATCTCATGGTCCG...TGCTACGCTTATTTGGAGACTAGAGGAGTGGGAGTTGAGCCTGGCTTGAACCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR GCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCTGGCCAGTTGGGGGCTaGCTAAATCCAGCACCCGCA +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLWPVGG*LNPAPA
Trigger: TGCGGGTGCTGGATTTAGGCAGCCCCCAACTGGCCA...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR GCA 90 bp AGGACTAGGGGTGGGAGAAGTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCACTTGGCCTCCCAAAATaGTGGGAATACAGATGTGAG +
Preference number: 4 (lower is better)
Translates to: RTRGGRSDLLLEDPVHPSLGLPK*WEYRCE
Trigger: CTCACATCTGTATTCCCAGCATTTTGGGAGGCCAAG...TGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCACTTCTCCCACCCCTAGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR GCA 90 bp TGGAGGACTAGGGGTGGGAGAAGTGACCTTCTGCTTGAGGATCCAGTCCACCCTTTCAAGCTATTCTCCTaGCTCAGTCTCCTGAATAGC +
Preference number: 4 (lower is better)
Translates to: WRTRGGRSDLLLEDPVHPFKLFS*LSLLNS
Trigger: GCTATTCAGGAGACTGAGGCAGGAGAATAGCTTGAA...AGGGTGGACTGGATCCTCAAGCAGAAGGTCACTTCTCCCACCCCTAGTCCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273075.9
CDS-3UTR GCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCCGAGCCATGGTGACCTaGTCACCTCCTCCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLRAMVT*SPPPKA
Trigger: AGCCTTGGGAGGAGGTGAGCAGGTCACCATGGCTCG...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523282.5
CDS-3UTR CCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCGTGGGATGCGAAGAATaGGCCGCTCCACGTGCACCA +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLVGCEE*AAPRAP
Trigger: TGGTGCACGTGGAGCGGCCCATTCTTCGCATCCCAC...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR CCA 90 bp GCTGAAGCCATTGCCAGGAACGTACTGGCCCCCTACAGCAAAAGCTATGATGGTATATTTCGCTGCAGATaGATGGCCAGGTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: AEAIARNVLAPYSKSYDGIFRCR*MARCGM
Trigger: CATCCCACACCTGGCCATCCATCTGCAGCGAAATAT...ACCATCATAGCTTTTGCTGTAGGGGGCCAGTACGTTCCTGGCAATGGCTTCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CCA 90 bp GAAGCCATTGCCAGGAACGTACTGGCCCCCTACAGCAAAAGCTATGATGGTGGATGGCTGTGGCAAGAATaGGGACTAGATGCATCTCTG +
Preference number: 4 (lower is better)
Translates to: EAIARNVLAPYSKSYDGGWLWQE*GLDASL
Trigger: CAGAGATGCATCTAGTCCCCATTCTTGCCACAGCCA...TCCACCATCATAGCTTTTGCTGTAGGGGGCCAGTACGTTCCTGGCAATGGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CCA 90 bp AAGGTTCAAGCCAGGCTCAACTCCCACTCCTCTAGTCTCCAAATAAGCGTAGCAGACATGAGGACCGAATaGTGCCGCTCATCCACAGCA +
Preference number: 4 (lower is better)
Translates to: KVQARLNSHSSSLQISVADMRTE*CRSSTA
Trigger: TGCTGTGGATGAGCGGCACCATTCGGTCCTCATGTC...TGCTACGCTTATTTGGAGACTAGAGGAGTGGGAGTTGAGCCTGGCTTGAACCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp CTGAAGCCATTGCCAGGAACGTACTGGCCCCCTACAGCAAAAGCTATGATGGTGTGGAATAAAGGCCGGTaGTTCTCCTCATGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: LKPLPGTYWPPTAKAMMVWNKGR*FSSCLS
Trigger: GGACAAGCATGAGGAGAACCACCGGCCTTTATTCCA...CACCATCATAGCTTTTGCTGTAGGGGGCCAGTACGTTCCTGGCAATGGCTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCTCTGGAGGACTCCTGTaGTGCAGGCCATCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLSGGLL*CRPSPG
Trigger: TCCGGGAGATGGCCTGCACCACAGGAGTCCTCCAGA...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR CCA 90 bp AGCCTGGAGAAGGCGGTTGCGGCATTCAGCCACAGCATGGAAAGGAGAGGGACTTCCACTAAGAGATTATaGCTTAGAGAAGGGAACAGC +
Preference number: 4 (lower is better)
Translates to: SLEKAVAAFSHSMERRGTSTKRL*LREGNS
Trigger: GCTGTTCCCTTCTCTAAGCCATAATCTCTTAGTGGA...AGTCCCTCTCCTTTCCATGCTGTGGCTGAATGCCGCAACCGCCTTCTCCAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373966.5
CDS-3UTR CCA 90 bp AGCAGCTCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGAAGGCAGAGCGGGATCCACTAAGAGATTATaGCTTAGAGAAGGGAACAGC +
Preference number: 4 (lower is better)
Translates to: SSSEGGPVQNRISEGRAGSTKRL*LREGNS
Trigger: GCTGTTCCCTTCTCTAAGCCATAATCTCTTAGTGGA...TCCCGCTCTGCCTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAGAGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp AGCAGCTCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGAAGGCAGAGCGGGAATAAGCCACCGTGCCTaGCCATATAATGTTTTGAAG +
Preference number: 4 (lower is better)
Translates to: SSSEGGPVQNRISEGRAGISHRA*PYNVLK
Trigger: CTTCAAAACATTATATGGCCAGGCACGGTGGCTTAT...TCCCGCTCTGCCTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAGAGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273075.9
CDS-3UTR CCA 90 bp AAGGTTCAAGCCAGGCTCAACTCCCACTCCTCTAGTCTCCAAATAAGCGTAGCAGGATCGAAATTCAAGTaGGGCCGTCGGGAGCCACTT +
Preference number: 4 (lower is better)
Translates to: KVQARLNSHSSSLQISVAGSKFK*GRREPL
Trigger: AAGTGGCTCCCGACGGCCCCACTTGAATTTCGATCC...TGCTACGCTTATTTGGAGACTAGAGGAGTGGGAGTTGAGCCTGGCTTGAACCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520694.6
CDS-3UTR CCA 90 bp CATTCAGCCACAGCATGGAAAGGAGAGGGACTCCGGTTCACGAACTTGAGGAGTCTGATTTGGAAGATTTaGGCTGAGGCCCAGGGATCT +
Preference number: 4 (lower is better)
Translates to: HSATAWKGEGLRFTNLRSLIWKI*AEAQGS
Trigger: AGATCCCTGGGCCTCAGCCCAAATCTTCCAAATCAG...ACTCCTCAAGTTCGTGAACCGGAGTCCCTCTCCTTTCCATGCTGTGGCTGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519698.1
CDS-3UTR CCA 90 bp TGGAAAGGAGAGGGACTCCGGTTCACGAACTTGAGGAGTTCCTTAGCCGCAGTCCTGAAACTCCTGATTTaGAAGATTTGGGCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: WKGEGLRFTNLRSSLAAVLKLLI*KIWAEA
Trigger: GGCCTCAGCCCAAATCTTCCAAATCAGGAGTTTCAG...GACTGCGGCTAAGGAACTCCTCAAGTTCGTGAACCGGAGTCCCTCTCCTTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519698.1
CDS-3UTR TCA 90 bp AAGGTTCAAGCCAGGCTCAACTCCCACTCCTCTAGTCTCCAAATAAGCGTAGCAAGGAGTTCCTGGTCATaGAGTACTTGCTCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: KVQARLNSHSSSLQISVARSSWS*STCSRA
Trigger: AGCCCGAGAGCAAGTACTTCATGACCAGGAACTCCT...TGCTACGCTTATTTGGAGACTAGAGGAGTGGGAGTTGAGCCTGGCTTGAACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR TCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCCTGCTCCAGCCGACCTaGGGTAGGGCACTTGACAAT +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLLLQPT*GRALDN
Trigger: ATTGTCAAGTGCCCTACCTCAGGTCGGCTGGAGCAG...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR TCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCCAGCTCTGTCAGCAGTaGCTGTGCTCCCTGTGCACT +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLQLCQQ*LCSLCT
Trigger: AGTGCACAGGGAGCACAGTCACTGCTGACAGAGCTG...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR TCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCGCTTGCTGTTCACCTTaGTCACGGGGCCCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLACCSP*SRGPCG
Trigger: TCCACAAGGGCCCCGTGATCAAGGTGAACAGCAAGC...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR TCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCTGTCATTCCGGACCATaGGATCCTGCAGGGGGACCT +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLCHSGP*DPAGGP
Trigger: AGGTCCCCCTGCAGGATCTCATGGTCCGGAATGACA...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR TCA 90 bp TGTCTGCCCAGAGCAGCTCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGAAGGGCCATATAATGTTTTaGAGGTACTCCTTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: CLPRAALKVAQCRTGSLKGHIMF*RYSLSC
Trigger: ACAGGACAAGGAGTACCTTCAAAACATTATATGGCC...CTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAGAGCTGCTCTGGGCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273075.9
CDS-3UTR TCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCTGTTGGGGACGAACATaGTGGAGAGGCTCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLCWGRT*WRGSEP
Trigger: TGGCTCGGAGCCTCTCCATCATGTTCGTCCCCAACA...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523282.5
CDS-3UTR GCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCTCTGCACCGCCTCTTTaGGGGCCTTACCGTTCATGG +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLSAPPL*GPYRSW
Trigger: CCATGAACGGTAAGGCCCGCAAAGAGGCGGTGCAGA...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR GCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCCCTGGAGAAGGCGGTTaGGGCATTCAGCCACAGCAT +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLPGEGG*GIQPQH
Trigger: ATGCTGTGGCTGAATGCCGCAACCGCCTTCTCCAGG...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273075.9
ENST00000373966.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR GCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCCAGGGAGCCAGGGCCTaGACAGGAATCTATCAAGGC +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLQGARA*TGIYQG
Trigger: GCCTTGATAGATTCCTGTGCAGGCCCTGGCTCCCTG...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR GCA 90 bp AGAAGAGATTTAAAACCAGATTTAAAACCATCAGCTCCCAGGAGTGTGGCCTCCTGGCCAGTTGGGGGCTaGCTAAATCCAGCACCCGCA +
Preference number: 4 (lower is better)
Translates to: RRDLKPDLKPSAPRSVASWPVGG*LNPAPA
Trigger: TGCGGGTGCTGGATTTAGGCAGCCCCCAACTGGCCA...GGAGGCCACACTCCTGGGAGCTGATGGTTTTAAATCTGGTTTTAAATCTCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR GCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCATCTCCCGGATAGAGTaGATGGCCAGTTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLISRIE*MASWGL
Trigger: CAGCCCCCAACTGGCCATGCACTCTATCCGGGAGAT...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR CCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCTCACTGAAGCCAGCCTaGAGAAGGCGGTTGCGGCAT +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLSLKPA*RRRLRH
Trigger: ATGCCGCAACCGCCTTCTCCAGGCTGGCTTCAGTGA...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273075.9
ENST00000373966.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR CCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCATGGATGGCCAGGTGTaGGATGCGAAGAATGGGCCG +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLMDGQV*DAKNGP
Trigger: CGGCCCATTCTTCGCATCCCACACCTGGCCATCCAT...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR CCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCTCTCCACTATGTCCTTaGGGCTCAGCCCCAGATGGG +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLSPLCP*GSAPDG
Trigger: CCCATCTGGGGCTGAGCCCCAAGGACATAGTGGAGA...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR CCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCGAGTGCATGGCCAGTTaGGGGCTGCCTAAATCCAGC +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLECMAS*GLPKSS
Trigger: GCTGGATTTAGGCAGCCCCCAACTGGCCATGCACTC...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR CCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCAAGAGGGTGAGGGTCTaGAGGACTCCTGTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLKRVRV*RTPVVQ
Trigger: CTGCACCACAGGAGTCCTCCAGACCCTCACCCTCTT...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR CCA 90 bp AGTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCACCCACTTCAGACATGGACTCAGGTGCAAAGGGATaGCAGAGAAGTCTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: SDLLLEDPVHPSPTSDMDSGAKG*QRSLSK
Trigger: CTTGGAAAGACTTCTCTGCCATCCCTTTGCACCTGA...GTCCATGTCTGAAGTGGGTGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCAGGCCATTTCCCAGGTaGAGGACTAGGGGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLRPFPR*RTRGGR
Trigger: TCTCCCACCCCTAGTCCTCCACCTGGGAAATGGCCT...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR TCA 90 bp TATAATGTTTTGAAGGTACTCCTTGTCCTGTGTCCAGTTCTGCAACCTGCCTTTCACAGAGCAGGGACATaGGGACCGAATGGTGCCGCT +
Preference number: 4 (lower is better)
Translates to: YNVLKVLLVLCPVLQPAFHRAGT*GPNGAA
Trigger: AGCGGCACCATTCGGTCCTCATGTCCCTGCTCTGTG...AAAGGCAGGTTGCAGAACTGGACACAGGACAAGGAGTACCTTCAAAACATTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273075.9
CDS-3UTR TCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCCGTTGTCATAGAGTGTaGCCATGCGCACGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLRCHRV*PCAREA
Trigger: AGCCTCACGTGCGCATGGTCACACTCTATGACAACG...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR TCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCCAGCTTCAGCTCAGCTaGGAACTTCCCCTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLQLQLS*ELPLSG
Trigger: ACCTGAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTG...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR TCA 90 bp AGGACTAGGGGTGGGAGAAGTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCACACGGAGAGTCTGAGTaGCAATCCACTTTAATAATC +
Preference number: 4 (lower is better)
Translates to: RTRGGRSDLLLEDPVHPSHGESE*QSTLII
Trigger: GATTATTAAAGTGGATTGTCACTCAGACTCTCCGTG...TGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCACTTCTCCCACCCCTAGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR TCA 90 bp AGAAGAGATTTAAAACCAGATTTAAAACCATCAGCTCCCAGGAGTGTGGCCTCCAGCCTCCGGAGTGGCTaGGATTACAGGCATGTGCCA +
Preference number: 4 (lower is better)
Translates to: RRDLKPDLKPSAPRSVASSLRSG*DYRHVP
Trigger: TGGCACATGCCTGTAATCTCAGCCACTCCGGAGGCT...GGAGGCCACACTCCTGGGAGCTGATGGTTTTAAATCTGGTTTTAAATCTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273075.9
CDS-3UTR GCA 90 bp TATAATGTTTTGAAGGTACTCCTTGTCCTGTGTCCAGTTCTGCAACCTGCCTTTGTCTCCACACCGACTTaGTGGAAGCCCACCTGGCTG +
Preference number: 4 (lower is better)
Translates to: YNVLKVLLVLCPVLQPAFVSTPT*WKPTWL
Trigger: CAGCCAGGTGGGCTTCCAGCAAGTCGGTGTGGAGAC...AAAGGCAGGTTGCAGAACTGGACACAGGACAAGGAGTACCTTCAAAACATTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273075.9
CDS-3UTR GCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCCACGGTCAAACCAGGTaGTCCAGATCCCACCACCAT +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLHGQTR*SRSHHH
Trigger: ATGGTGGTGGGATCTGGAGCACCTGGTTTGACCGTG...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR GCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCGCACAGAAGCAGCTGTaGAGATTGTCCAGCCGAGGA +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLAQKQL*RLSSRG
Trigger: TCCTCGGCTGGACAATCTGCACAGCTGCTTCTGTGC...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR GCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCCGGACCATGAGATCCTaGAGGGGGACCTTGACTTTG +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLRTMRS*RGTLTL
Trigger: CAAAGTCAAGGTCCCCCTGCAGGATCTCATGGTCCG...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR GCA 90 bp GAAGGCAGAGCGGGACACCCATTCTGGGGATGGAAAGAGGGAAGACCGTTGAGGGGAAGGACACCAGTTTaGACAATTATTTTAGTGGAA +
Preference number: 4 (lower is better)
Translates to: EGRAGHPFWGWKEGRPLRGRTPV*TIILVE
Trigger: TTCCACTAAAATAATTGTGCAAACTGGTGTCCTTCC...CCTCAACGGTCTTCCCTCTTTCCATCCCCAGAATGGGTGTCCCGCTCTGCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273075.9
CDS-3UTR GCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCGGGTACGGTACAAAGTaGTGTCTCTCGCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLGYGTK*CLSPQP
Trigger: TGGCTGTGGCGAGAGACAGCACTTTGTACCGTACCC...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373972.5
CDS-3UTR CCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCCATTCAGCCACAGCATaGAAAGGAGAGGGACTCCGG +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLHSATA*KGEGLR
Trigger: CCGGAGTCCCTCTCCTTTCCATGCTGTGGCTGAATG...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273075.9
ENST00000373966.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR CCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCTTCGCTGCAGATGGATaGCCAGGTGTGGGATGCGAA +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLFAADG*PGVGCE
Trigger: TTCGCATCCCACACCTGGCCATCCATCTGCAGCGAA...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR CCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCGACATGAGGACCGAATaGTGCCGCTCATCCACAGCA +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLDMRTE*CRSSTA
Trigger: TGCTGTGGATGAGCGGCACCATTCGGTCCTCATGTC...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR CCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCTTGGGATGCACAGCATaGGCCATGTCTGCGCTGATC +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLLGCTA*AMSALI
Trigger: GATCAGCGCAGACATGGCCCATGCTGTGCATCCCAA...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR CCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCGCTTGTCCAGGTAGTTaGGATGCACAGCATGGGCCA +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLACPGS*DAQHGP
Trigger: TGGCCCATGCTGTGCATCCCAACTACCTGGACAAGC...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR CCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCATCACGGGGCCCTTGTaGAATAAAGGCCGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLITGPL*NKGRWF
Trigger: GAACCACCGGCCTTTATTCCACAAGGGCCCCGTGAT...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR CCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCGCGGGACACCCATTCTaGGGATGGAAAGAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLAGHPF*GWKEGR
Trigger: TCTTCCCTCTTTCCATCCCCAGAATGGGTGTCCCGC...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp AGAAGAGATTTAAAACCAGATTTAAAACCATCAGCTCCCAGGAGTGTGGCCTCCGGGCCTTACCGTTCATaGCCACCTAGTCTCTCGCAG +
Preference number: 4 (lower is better)
Translates to: RRDLKPDLKPSAPRSVASGPYRS*PPSLSQ
Trigger: CTGCGAGAGACTAGGTGGCCATGAACGGTAAGGCCC...GGAGGCCACACTCCTGGGAGCTGATGGTTTTAAATCTGGTTTTAAATCTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520694.6
CDS-3UTR CCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCGGGCCTTACCGTTCATaGCCACCTTGTGGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLGPYRS*PPCGSH
Trigger: ATGGCTACCACAAGGTGGCCATGAACGGTAAGGCCC...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523282.5
CDS-3UTR TCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCAGGAGTTCCTGGTCATaGAGTACTTGCTCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLRSSWS*STCSRA
Trigger: AGCCCGAGAGCAAGTACTTCATGACCAGGAACTCCT...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR TCA 90 bp AAGGTTCAAGCCAGGCTCAACTCCCACTCCTCTAGTCTCCAAATAAGCGTAGCAGCCCAAAGTTCTCGTTaGTATTTCGCTGCAGATGGA +
Preference number: 4 (lower is better)
Translates to: KVQARLNSHSSSLQISVAAQSSR*YFAADG
Trigger: TCCATCTGCAGCGAAATATCAACGAGAACTTTGGGC...TGCTACGCTTATTTGGAGACTAGAGGAGTGGGAGTTGAGCCTGGCTTGAACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR TCA 90 bp TATAATGTTTTGAAGGTACTCCTTGTCCTGTGTCCAGTTCTGCAACCTGCCTTTGCTTGCTGTTCACCTTaGTCACGGGGCCCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: YNVLKVLLVLCPVLQPAFACCSP*SRGPCG
Trigger: TCCACAAGGGCCCCGTGATCAAGGTGAACAGCAAGC...AAAGGCAGGTTGCAGAACTGGACACAGGACAAGGAGTACCTTCAAAACATTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273075.9
CDS-3UTR TCA 90 bp TATAATGTTTTGAAGGTACTCCTTGTCCTGTGTCCAGTTCTGCAACCTGCCTTTTGTCATTCCGGACCATaGGATCCTGCAGGGGGACCT +
Preference number: 4 (lower is better)
Translates to: YNVLKVLLVLCPVLQPAFCHSGP*DPAGGP
Trigger: AGGTCCCCCTGCAGGATCTCATGGTCCGGAATGACA...AAAGGCAGGTTGCAGAACTGGACACAGGACAAGGAGTACCTTCAAAACATTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273075.9
CDS-3UTR GCA 90 bp AAGGTTCAAGCCAGGCTCAACTCCCACTCCTCTAGTCTCCAAATAAGCGTAGCATCGTTGATATTTCGCTaGAGATGGATGGCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: KVQARLNSHSSSLQISVASLIFR*RWMARC
Trigger: ACACCTGGCCATCCATCTGCAGCGAAATATCAACGA...TGCTACGCTTATTTGGAGACTAGAGGAGTGGGAGTTGAGCCTGGCTTGAACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR GCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCATGAGGACCGAATGGTaGCGCTCATCCACAGCATTG +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLMRTEW*RSSTAL
Trigger: CAATGCTGTGGATGAGCGGCACCATTCGGTCCTCAT...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR GCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCGAATCTATCAAGGCCTaGAGGGCACAGAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLESIKA*RAQKQL
Trigger: CAGCTGCTTCTGTGCCCTGCAGGCCTTGATAGATTC...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR CCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCTTGCCAGGAACGTACTaGCCCCCTACAGCAAAAGCT +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLLPGTY*PPTAKA
Trigger: AGCTTTTGCTGTAGGGGGCCAGTACGTTCCTGGCAA...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR CCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCCCTCCTGGATGGCTGTaGCAAGAATGGGGACTAGAT +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLPPGWL*QEWGLD
Trigger: ATCTAGTCCCCATTCTTGCCACAGCCATCCAGGAGG...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR CCA 90 bp GTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCACCCACTTCAGACATGGACTTCCACTAAGAGATTATaGCTTAGAGAAGGGAACAGC +
Preference number: 4 (lower is better)
Translates to: VTFCLRIQSTLHPLQTWTSTKRL*LREGNS
Trigger: GCTGTTCCCTTCTCTAAGCCATAATCTCTTAGTGGA...AGTCCATGTCTGAAGTGGGTGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp AAGGTTCAAGCCAGGCTCAACTCCCACTCCTCTAGTCTCCAAATAAGCGTAGCAGGGACTGCTGAGAAGTaGATGATGAAGGGTGATAAG +
Preference number: 4 (lower is better)
Translates to: KVQARLNSHSSSLQISVAGTAEK*MMKGDK
Trigger: CTTATCACCCTTCATCATCCACTTCTCAGCAGTCCC...TGCTACGCTTATTTGGAGACTAGAGGAGTGGGAGTTGAGCCTGGCTTGAACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR TCA 90 bp AGAAGAGATTTAAAACCAGATTTAAAACCATCAGCTCCCAGGAGTGTGGCCTCCGCTGGTCTTGAACTCTaGCCTCAAGTGATCCACCTG +
Preference number: 4 (lower is better)
Translates to: RRDLKPDLKPSAPRSVASAGLEL*PQVIHL
Trigger: CAGGTGGATCACTTGAGGTCAGAGTTCAAGACCAGC...GGAGGCCACACTCCTGGGAGCTGATGGTTTTAAATCTGGTTTTAAATCTCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR GCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCAGAATGGGGACTAGATaGATCTCTGTGTTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLRMGTR*ISVLGP
Trigger: TGGGCCCAACACAGAGATGCATCTAGTCCCCATTCT...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR GCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCAGCATGGGCCATGTCTaGGCTGATCATGAAGGACTT +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLSMGHV*ADHEGL
Trigger: AAGTCCTTCATGATCAGCGCAGACATGGCCCATGCT...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR CCA 90 bp AGAAGAGATTTAAAACCAGATTTAAAACCATCAGCTCCCAGGAGTGTGGCCTCCTTGCCAGGAACGTACTaGCCCCCTACAGCAAAAGCT +
Preference number: 4 (lower is better)
Translates to: RRDLKPDLKPSAPRSVASLPGTY*PPTAKA
Trigger: AGCTTTTGCTGTAGGGGGCCAGTACGTTCCTGGCAA...GGAGGCCACACTCCTGGGAGCTGATGGTTTTAAATCTGGTTTTAAATCTCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCATATTTCGCTGCAGATaGATGGCCAGGTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLIFRCR*MARCGM
Trigger: CATCCCACACCTGGCCATCCATCTGCAGCGAAATAT...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR CCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCTGGCTGTGGCAAGAATaGGGACTAGATGCATCTCTG +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLWLWQE*GLDASL
Trigger: CAGAGATGCATCTAGTCCCCATTCTTGCCACAGCCA...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR CCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCTGGAATAAAGGCCGGTaGTTCTCCTCATGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLWNKGR*FSSCLS
Trigger: GGACAAGCATGAGGAGAACCACCGGCCTTTATTCCA...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR CCA 90 bp TATAATGTTTTGAAGGTACTCCTTGTCCTGTGTCCAGTTCTGCAACCTGCCTTTATCACGGGGCCCTTGTaGAATAAAGGCCGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: YNVLKVLLVLCPVLQPAFITGPL*NKGRWF
Trigger: GAACCACCGGCCTTTATTCCACAAGGGCCCCGTGAT...AAAGGCAGGTTGCAGAACTGGACACAGGACAAGGAGTACCTTCAAAACATTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273075.9
CDS-3UTR TCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCGCCCAAAGTTCTCGTTaGTATTTCGCTGCAGATGGA +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLAQSSR*YFAADG
Trigger: TCCATCTGCAGCGAAATATCAACGAGAACTTTGGGC...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR TCA 90 bp TATAATGTTTTGAAGGTACTCCTTGTCCTGTGTCCAGTTCTGCAACCTGCCTTTGGGATTTTGGGAGGGTaGGAAACAGCTTTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: YNVLKVLLVLCPVLQPAFGILGG*ETALSA
Trigger: GGCAGACAAAGCTGTTTCTCACCCTCCCAAAATCCC...AAAGGCAGGTTGCAGAACTGGACACAGGACAAGGAGTACCTTCAAAACATTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273075.9
CDS-3UTR TCA 90 bp AGAAGAGATTTAAAACCAGATTTAAAACCATCAGCTCCCAGGAGTGTGGCCTCCTGGCAAGGCTGGTCTTaGACTCTGACCTCAAGTGAT +
Preference number: 4 (lower is better)
Translates to: RRDLKPDLKPSAPRSVASWQGWS*TLTSSD
Trigger: ATCACTTGAGGTCAGAGTTCAAGACCAGCCTTGCCA...GGAGGCCACACTCCTGGGAGCTGATGGTTTTAAATCTGGTTTTAAATCTCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR GCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCTCGTTGATATTTCGCTaGAGATGGATGGCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLSLIFR*RWMARC
Trigger: ACACCTGGCCATCCATCTGCAGCGAAATATCAACGA...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR CCA 90 bp AGAAGAGATTTAAAACCAGATTTAAAACCATCAGCTCCCAGGAGTGTGGCCTCCATATTTCGCTGCAGATaGATGGCCAGGTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: RRDLKPDLKPSAPRSVASIFRCR*MARCGM
Trigger: CATCCCACACCTGGCCATCCATCTGCAGCGAAATAT...GGAGGCCACACTCCTGGGAGCTGATGGTTTTAAATCTGGTTTTAAATCTCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCTCAGGTGCAAAGGGATaGCAGAGAAGTCTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLSGAKG*QRSLSK
Trigger: CTTGGAAAGACTTCTCTGCCATCCCTTTGCACCTGA...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR TCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCGTAGCACGGAGAGTCTaGGTGACAATCCACTTTAAT +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLVARRV*VTIHFN
Trigger: ATTAAAGTGGATTGTCACTCAGACTCTCCGTGCTAC...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR GCA 90 bp TATAATGTTTTGAAGGTACTCCTTGTCCTGTGTCCAGTTCTGCAACCTGCCTTTAGCATGGGCCATGTCTaGGCTGATCATGAAGGACTT +
Preference number: 4 (lower is better)
Translates to: YNVLKVLLVLCPVLQPAFSMGHV*ADHEGL
Trigger: AAGTCCTTCATGATCAGCGCAGACATGGCCCATGCT...AAAGGCAGGTTGCAGAACTGGACACAGGACAAGGAGTACCTTCAAAACATTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273075.9
CDS-3UTR TCA 90 bp AGAAGAGATTTAAAACCAGATTTAAAACCATCAGCTCCCAGGAGTGTGGCCTCCGTAGCACGGAGAGTCTaGGTGACAATCCACTTTAAT +
Preference number: 4 (lower is better)
Translates to: RRDLKPDLKPSAPRSVASVARRV*VTIHFN
Trigger: ATTAAAGTGGATTGTCACTCAGACTCTCCGTGCTAC...GGAGGCCACACTCCTGGGAGCTGATGGTTTTAAATCTGGTTTTAAATCTCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCTCCACTAAGAGATTATaGCTTAGAGAAGGGAACAGC +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLSTKRL*LREGNS
Trigger: GCTGTTCCCTTCTCTAAGCCATAATCTCTTAGTGGA...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR TCA 90 bp AGAAGAGATTTAAAACCAGATTTAAAACCATCAGCTCCCAGGAGTGTGGCCTCCCACGGAGAGTCTGAGTaGCAATCCACTTTAATAATC +
Preference number: 4 (lower is better)
Translates to: RRDLKPDLKPSAPRSVASHGESE*QSTLII
Trigger: GATTATTAAAGTGGATTGTCACTCAGACTCTCCGTG...GGAGGCCACACTCCTGGGAGCTGATGGTTTTAAATCTGGTTTTAAATCTCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CCA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCAGGTATCAAAAAGATTaGAAGGACACCAGTTTGCAC +
Preference number: 4 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLRYQKD*KDTSLH
Trigger: GTGCAAACTGGTGTCCTTCCAATCTTTTTGATACCT...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273075.9
CDS CCA 90 bp TCAAGTGGGGCCGTCGGGAGCCACTTACCTGCATGGCCCCGCGCGTaGGGCTGTGTCCGCTCATCTGGCCTCCGGGCTCGGCCCGCCCCC +
Preference number: 5 (lower is better)
Translates to: SSGAVGSHLPAWPRA*GCVRSSGLRARPAP
Trigger: GGGGGCGGGCCGAGCCCGGAGGCCAGATGAGCGGACACAGCCCCACGCGCGGGGCCATGCAGGTAAGTGGCTCCCGACGGCCCCACTTGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373966.5
CDS CCA 90 bp TGGGCCCCGGAGGGCGCCGGACCCGGTCTGGGATCGAAATTCAAGTaGGGCCGTCGGGAGCCACTTACCTGCATGGCCCCGCGCGTGGGG +
Preference number: 5 (lower is better)
Translates to: WAPEGAGPGLGSKFK*GRREPLTCMAPRVG
Trigger: CCCCACGCGCGGGGCCATGCAGGTAAGTGGCTCCCGACGGCCCCACTTGAATTTCGATCCCAGACCGGGTCCGGCGCCCTCCGGGGCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373966.5
ENST00000520694.6
CDS CCA 90 bp CAGCACCGCGCTAAGCTTGGGCCCCGGAGGGCGCCGGACCCGGTCTaGGATCGAAATTCAAGTGGGGCCGTCGGGAGCCACTTACCTGCA +
Preference number: 5 (lower is better)
Translates to: QHRAKLGPRRAPDPV*DRNSSGAVGSHLPA
Trigger: TGCAGGTAAGTGGCTCCCGACGGCCCCACTTGAATTTCGATCCCAGACCGGGTCCGGCGCCCTCCGGGGCCCAAGCTTAGCGCGGTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373966.5
ENST00000520694.6
CDS CCA 90 bp GGGAAAGTCGTCAGGTCACCCTCCGCGGGGCTTTCGGTTTCGCTTTaGGTCAGGCGGCCCCACTGCAGCACCGCGCTAAGCTTGGGCCCC +
Preference number: 5 (lower is better)
Translates to: GKVVRSPSAGLSVSL*VRRPHCSTALSLGP
Trigger: GGGGCCCAAGCTTAGCGCGGTGCTGCAGTGGGGCCGCCTGACCCAAAGCGAAACCGAAAGCCCCGCGGAGGGTGACCTGACGACTTTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373966.5
ENST00000520694.6
CDS-3UTR CAA 90 bp GCGAGACCGACGTTTCACCCGGAGGCAGGGGCTGTCCGTGTGGGCCCCGATGAGCCTGAGGTAGGGCACTaGACAATGACGCGTCCAGCC +
Preference number: 5 (lower is better)
Translates to: ARPTFHPEAGAVRVGPDEPEVGH*TMTRPA
Trigger: GGCTGGACGCGTCATTGTCAAGTGCCCTACCTCAGG...CTCATCGGGGCCCACACGGACAGCCCCTGCCTCCGGGTGAAACGTCGGTCTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CAA 90 bp CTTGAGTTCACTGAAGCCAGCCTGGAGAAGGCGGTTGCGGCATTCAGCCACAGCAGCACCGCGCTAAGCTaGGGCCCCGGAGGGCGCCGG +
Preference number: 5 (lower is better)
Translates to: LEFTEASLEKAVAAFSHSSTALS*GPGGRR
Trigger: CCGGCGCCCTCCGGGGCCCAAGCTTAGCGCGGTGCT...GCTGTGGCTGAATGCCGCAACCGCCTTCTCCAGGCTGGCTTCAGTGAACTCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373966.5
CDS-3UTR CAA 90 bp GAAGGCAGAGCGGGACACCCATTCTGGGGATGGAAAGAGGGAAGACCGTTGAGGCGCCCCTCACTAGCTTaGCAGGTCCCCCGCGTGCCC +
Preference number: 5 (lower is better)
Translates to: EGRAGHPFWGWKEGRPLRRPSLA*QVPRVP
Trigger: GGGCACGCGGGGGACCTGCAAAGCTAGTGAGGGGCG...CCTCAACGGTCTTCCCTCTTTCCATCCCCAGAATGGGTGTCCCGCTCTGCCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273075.9
CDS-3UTR CAA 90 bp CAGAGCAGGGACATGAGGACCGAATGGTGCCGCTCATCCACAGCATTGAGAGGCCGCCCCTCACTAGCTTaGCAGGTCCCCCGCGTGCCC +
Preference number: 5 (lower is better)
Translates to: QSRDMRTEWCRSSTALRGRPSLA*QVPRVP
Trigger: GGGCACGCGGGGGACCTGCAAAGCTAGTGAGGGGCG...GCCTCTCAATGCTGTGGATGAGCGGCACCATTCGGTCCTCATGTCCCTGCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CAA 90 bp GAAGCCAGCCTGGAGAAGGCGGTTGCGGCATTCAGCCACAGCATGGAAAGGAGACGCCCCTCACTAGCTTaGCAGGTCCCCCGCGTGCCC +
Preference number: 5 (lower is better)
Translates to: EASLEKAVAAFSHSMERRRPSLA*QVPRVP
Trigger: GGGCACGCGGGGGACCTGCAAAGCTAGTGAGGGGCG...TCTCCTTTCCATGCTGTGGCTGAATGCCGCAACCGCCTTCTCCAGGCTGGCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373966.5
CDS-3UTR CAA 90 bp TCCGTGTGGGCCCCGATGAGGCTGAAGCCATTGCCAGGAACGTACTGGCCCCCTGCTTTCGGTTTCGCTTaGGGTCAGGCGGCCCCACTG +
Preference number: 5 (lower is better)
Translates to: SVWAPMRLKPLPGTYWPPAFGFA*GQAAPL
Trigger: CAGTGGGGCCGCCTGACCCAAAGCGAAACCGAAAGC...AGGGGGCCAGTACGTTCCTGGCAATGGCTTCAGCCTCATCGGGGCCCACACGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373966.5
CDS-3UTR CAA 90 bp GCTGTCCGTGTGGGCCCCGATGAGGCTGAAGCCATTGCCAGGAACGTACTGGCCGTCTGCACCGCCTCTTaGCGGGCCTTACCGTTCATG +
Preference number: 5 (lower is better)
Translates to: AVRVGPDEAEAIARNVLAVCTAS*RALPFM
Trigger: CATGAACGGTAAGGCCCGCAAAGAGGCGGTGCAGAC...GGCCAGTACGTTCCTGGCAATGGCTTCAGCCTCATCGGGGCCCACACGGACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CAA 90 bp GTGTGGGCCCCGATGAGGCTGAAGCCATTGCCAGGAACGTACTGGCCCCCTACAGCCTGGAGAAGGCGGTaGCGGCATTCAGCCACAGCA +
Preference number: 5 (lower is better)
Translates to: VWAPMRLKPLPGTYWPPTAWRRR*RHSATA
Trigger: TGCTGTGGCTGAATGCCGCAACCGCCTTCTCCAGGC...TGTAGGGGGCCAGTACGTTCCTGGCAATGGCTTCAGCCTCATCGGGGCCCACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373966.5
ENST00000519698.1
CDS-3UTR CAA 90 bp ACTCCTGTGGTGCAGGCCATCTCCCGGATAGAGTGCATGGCCAGTTGGGGGCTGGGTCTCCACACCGACTaGCTGGAAGCCCACCTGGCT +
Preference number: 5 (lower is better)
Translates to: TPVVQAISRIECMASWGLGLHTD*LEAHLA
Trigger: AGCCAGGTGGGCTTCCAGCAAGTCGGTGTGGAGACC...CAGCCCCCAACTGGCCATGCACTCTATCCGGGAGATGGCCTGCACCACAGGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CAA 90 bp GTGGGCCCCGATGAGGCTGAAGCCATTGCCAGGAACGTACTGGCCCCCTACAGCCCTGAGGTAGGGCACTaGACAATGACGCGTCCAGCC +
Preference number: 5 (lower is better)
Translates to: VGPDEAEAIARNVLAPYSPEVGH*TMTRPA
Trigger: GGCTGGACGCGTCATTGTCAAGTGCCCTACCTCAGG...GCTGTAGGGGGCCAGTACGTTCCTGGCAATGGCTTCAGCCTCATCGGGGCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS GCA 90 bp GAGGGACTCCGGTTCACGAACTTGAGGAGTTCCTTAGCCGCAGTCTaGACCGCCTCTTTGCGGGCCTTACCGTTCATGGCCACCGGGTCC +
Preference number: 5 (lower is better)
Translates to: EGLRFTNLRSSLAAV*TASLRALPFMATGS
Trigger: GGACCCGGTGGCCATGAACGGTAAGGCCCGCAAAGAGGCGGTGCAGACTGCGGCTAAGGAACTCCTCAAGTTCGTGAACCGGAGTCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373972.5
ENST00000519905.1
CDS-3UTR CAA 90 bp CACCACCCAAGACCGCAGGCTGGGTGTCTGCAAGGCAGAGCTCCATCTCCACTAGCCTGGAGAAGGCGGTaGCGGCATTCAGCCACAGCA +
Preference number: 5 (lower is better)
Translates to: HHPRPQAGCLQGRAPSPLAWRRR*RHSATA
Trigger: TGCTGTGGCTGAATGCCGCAACCGCCTTCTCCAGGC...TAGTGGAGATGGAGCTCTGCCTTGCAGACACCCAGCCTGCGGTCTTGGGTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373966.5
CDS-3UTR CAA 90 bp ACTCCTGTGGTGCAGGCCATCTCCCGGATAGAGTGCATGGCCAGTTGGGGGCTGCGCTCATCCACAGCATaGAGAGGCCCTGGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: TPVVQAISRIECMASWGLRSSTA*RGPGSG
Trigger: TCCTGAGCCAGGGCCTCTCAATGCTGTGGATGAGCG...CAGCCCCCAACTGGCCATGCACTCTATCCGGGAGATGGCCTGCACCACAGGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CAA 90 bp TCGGGTGCTGGCACGAGGCTGAGATCCGCCGCAGCACCAGCTCTGTCAGCAGTGAAGCAGCTGTGCAGATaGTCCAGCCGAGGAGCAAAG +
Preference number: 5 (lower is better)
Translates to: SGAGTRLRSAAAPALSAVKQLCR*SSRGAK
Trigger: CTTTGCTCCTCGGCTGGACAATCTGCACAGCTGCTT...CACTGCTGACAGAGCTGGTGCTGCGGCGGATCTCAGCCTCGTGCCAGCACCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CAA 90 bp TGGCCAGTTGGGGGCTGCCTAAATCCAGCACCCGCAGCCCCAGCCGAGAAGCCAAGCTCAAAGAAGCCCTaGAAGAGGGTGAGGGTCTGG +
Preference number: 5 (lower is better)
Translates to: WPVGGCLNPAPAAPAEKPSSKKP*KRVRVW
Trigger: CCAGACCCTCACCCTCTTCAAGGGCTTCTTTGAGCT...TGGCTTCTCGGCTGGGGCTGCGGGTGCTGGATTTAGGCAGCCCCCAACTGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CAA 90 bp GGTGGCCCAGTGCAGAACAGGATCTCTGAAGGCAGAGCGGGACACCCATTCTGGGCTTTCGGTTTCGCTTaGGGTCAGGCGGCCCCACTG +
Preference number: 5 (lower is better)
Translates to: GGPVQNRISEGRAGHPFWAFGFA*GQAAPL
Trigger: CAGTGGGGCCGCCTGACCCAAAGCGAAACCGAAAGC...CCAGAATGGGTGTCCCGCTCTGCCTTCAGAGATCCTGTTCTGCACTGGGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520694.6
CDS GCA 90 bp GAGGGACTCCGGTTCACGAACTTGAGGAGTTCCTTAGCCGCAGTCTaGACCGCCTCTTTGCGGGCCTTACCGTTCATGGCCACCTCCTCC +
Preference number: 5 (lower is better)
Translates to: EGLRFTNLRSSLAAV*TASLRALPFMATSS
Trigger: GGAGGAGGTGGCCATGAACGGTAAGGCCCGCAAAGAGGCGGTGCAGACTGCGGCTAAGGAACTCCTCAAGTTCGTGAACCGGAGTCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434339.5
CDS CCA 90 bp AGGCCCTTCACCCACAGGTTCCTACAGCCAGTCCTCACCGCAGGCTaGGTGTCTGCAAGGCAGAGCTCCATCTCCACTATGTCCTTGGGG +
Preference number: 5 (lower is better)
Translates to: RPFTHRFLQPVLTAG*VSARQSSISTMSLG
Trigger: CCCCAAGGACATAGTGGAGATGGAGCTCTGCCTTGCAGACACCCAGCCTGCGGTGAGGACTGGCTGTAGGAACCTGTGGGTGAAGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460963.5
ENST00000522421.1
CDS-3UTR CAA 90 bp TCTGCCCAGAGCAGCTCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGAAGGCGGTCTCCACACCGACTaGCTGGAAGCCCACCTGGCT +
Preference number: 5 (lower is better)
Translates to: SAQSSSEGGPVQNRISEGGLHTD*LEAHLA
Trigger: AGCCAGGTGGGCTTCCAGCAAGTCGGTGTGGAGACC...GCCTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAGAGCTGCTCTGGGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CAA 90 bp CGTCCAGCCAGAGTCAGGTCACGGTCAAACCAGGTGCTCCAGATCCCACCACCACGCTCATCCACAGCATaGAGAGGCCCTGGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: RPARVRSRSNQVLQIPPPRSSTA*RGPGSG
Trigger: TCCTGAGCCAGGGCCTCTCAATGCTGTGGATGAGCG...TGGTGGTGGGATCTGGAGCACCTGGTTTGACCGTGACCTGACTCTGGCTGGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CAA 90 bp TCCGTGTGGGCCCCGATGAGGCTGAAGCCATTGCCAGGAACGTACTGGCCCCCTCCTCTGACACCGCGTTaGAAGCATAGCGTTGCTTGC +
Preference number: 5 (lower is better)
Translates to: SVWAPMRLKPLPGTYWPPPLTPR*KHSVAC
Trigger: GCAAGCAACGCTATGCTTCAAACGCGGTGTCAGAGG...AGGGGGCCAGTACGTTCCTGGCAATGGCTTCAGCCTCATCGGGGCCCACACGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CAA 90 bp CTGCAGATGGATGGCCAGGTGTGGGATGCGAAGAATGGGCCGCTCCACGTGCACGGGACCTTGACTTTGTaGGCCACCTCTCGGATCAGG +
Preference number: 5 (lower is better)
Translates to: LQMDGQVWDAKNGPLHVHGTLTL*ATSRIR
Trigger: CCTGATCCGAGAGGTGGCCAACAAAGTCAAGGTCCC...GTGCACGTGGAGCGGCCCATTCTTCGCATCCCACACCTGGCCATCCATCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CAA 90 bp GCTGCAGATGGATGGCCAGGTGTGGGATGCGAAGAATGGGCCGCTCCACGTGCAAGGGGGACCTTGACTTaGTTGGCCACCTCTCGGATC +
Preference number: 5 (lower is better)
Translates to: AADGWPGVGCEEWAAPRARGTLT*LATSRI
Trigger: GATCCGAGAGGTGGCCAACAAAGTCAAGGTCCCCCT...TGCACGTGGAGCGGCCCATTCTTCGCATCCCACACCTGGCCATCCATCTGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS TCA 90 bp AGGAGGGCACAGCTGAGTGCGGCATCCATAAGTTCAGGTGCCTCCTaGTGGGCAACTGCCTCTGCCCTTCAATTCCCAGCCCACTCCCCA +
Preference number: 5 (lower is better)
Translates to: RRAQLSAASISSGAS*WATASALQFPAHSP
Trigger: TGGGGAGTGGGCTGGGAATTGAAGGGCAGAGGCAGTTGCCCATCAGGAGGCACCTGAACTTATGGATGCCGCACTCAGCTGTGCCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522421.1
CDS GCA 90 bp GAGGGACTCCGGTTCACGAACTTGAGGAGTTCCTTAGCCGCAGTCTaGACCGCCTCTTTGCGGGCCTTACCGTTCATGGCCACCTGCATG +
Preference number: 5 (lower is better)
Translates to: EGLRFTNLRSSLAAV*TASLRALPFMATCM
Trigger: CATGCAGGTGGCCATGAACGGTAAGGCCCGCAAAGAGGCGGTGCAGACTGCGGCTAAGGAACTCCTCAAGTTCGTGAACCGGAGTCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000322176.11
ENST00000373963.5
ENST00000460963.5
ENST00000521459.5
ENST00000523527.5
CDS GCA 90 bp GAGGGACTCCGGTTCACGAACTTGAGGAGTTCCTTAGCCGCAGTCTaGACCGCCTCTTTGCGGGCCTTACCGTTCATGGCCACCTCTGCT +
Preference number: 5 (lower is better)
Translates to: EGLRFTNLRSSLAAV*TASLRALPFMATSA
Trigger: AGCAGAGGTGGCCATGAACGGTAAGGCCCGCAAAGAGGCGGTGCAGACTGCGGCTAAGGAACTCCTCAAGTTCGTGAACCGGAGTCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429013.5
ENST00000430206.5
CDS GCA 90 bp GAGGGACTCCGGTTCACGAACTTGAGGAGTTCCTTAGCCGCAGTCTaGACCGCCTCTTTGCGGGCCTTACCGTTCATGGCCACCTTGTGG +
Preference number: 5 (lower is better)
Translates to: EGLRFTNLRSSLAAV*TASLRALPFMATLW
Trigger: CCACAAGGTGGCCATGAACGGTAAGGCCCGCAAAGAGGCGGTGCAGACTGCGGCTAAGGAACTCCTCAAGTTCGTGAACCGGAGTCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457935.5
ENST00000523282.5
CDS-3UTR CAA 90 bp TCTGCCCAGAGCAGCTCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGAAGGCGTCTGCACCGCCTCTTaGCGGGCCTTACCGTTCATG +
Preference number: 5 (lower is better)
Translates to: SAQSSSEGGPVQNRISEGVCTAS*RALPFM
Trigger: CATGAACGGTAAGGCCCGCAAAGAGGCGGTGCAGAC...GCCTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAGAGCTGCTCTGGGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CAA 90 bp GGAAAGTCGTCAGGTCACCCTCCGCGGGGCTTTCGGTTTCGCTTTGGGTCAGGCCTCCGGTTCACGAACTaGAGGAGTTCCTTAGCCGCA +
Preference number: 5 (lower is better)
Translates to: GKSSGHPPRGFRFRFGSGLRFTN*RSSLAA
Trigger: TGCGGCTAAGGAACTCCTCAAGTTCGTGAACCGGAG...GCCTGACCCAAAGCGAAACCGAAAGCCCCGCGGAGGGTGACCTGACGACTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373966.5
CDS-3UTR CAA 90 bp ATAGGCACCACCCAAGACCGCAGGCTGGGTGTCTGCAAGGCAGAGCTCCATCTCATGAGGCTGAAGCCATaGCCAGGAACGTACTGGCCC +
Preference number: 5 (lower is better)
Translates to: IGTTQDRRLGVCKAELHLMRLKP*PGTYWP
Trigger: GGGCCAGTACGTTCCTGGCAATGGCTTCAGCCTCAT...GAGATGGAGCTCTGCCTTGCAGACACCCAGCCTGCGGTCTTGGGTGGTGCCTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CAA 90 bp AGCAGCTCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGAAGGCAGAGCGGGACCTGAGGTAGGGCACTaGACAATGACGCGTCCAGCC +
Preference number: 5 (lower is better)
Translates to: SSSEGGPVQNRISEGRAGPEVGH*TMTRPA
Trigger: GGCTGGACGCGTCATTGTCAAGTGCCCTACCTCAGG...TCCCGCTCTGCCTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAGAGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CAA 90 bp TCTGCCCAGAGCAGCTCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGAAGGCCGCTCATCCACAGCATaGAGAGGCCCTGGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: SAQSSSEGGPVQNRISEGRSSTA*RGPGSG
Trigger: TCCTGAGCCAGGGCCTCTCAATGCTGTGGATGAGCG...GCCTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAGAGCTGCTCTGGGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CAA 90 bp AGGCAGAGCGGGACACCCATTCTGGGGATGGAAAGAGGGAAGACCGTTGAGGCCTTGATCACGGGGCCCTaGTGGAATAAAGGCCGGTGG +
Preference number: 5 (lower is better)
Translates to: RQSGTPILGMERGKTVEALITGP*WNKGRW
Trigger: CCACCGGCCTTTATTCCACAAGGGCCCCGTGATCAA...GGCCTCAACGGTCTTCCCTCTTTCCATCCCCAGAATGGGTGTCCCGCTCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CAA 90 bp AGGCAGAGCGGGACACCCATTCTGGGGATGGAAAGAGGGAAGACCGTTGAGGCCTGCTTGCTGTTCACCTaGATCACGGGGCCCTTGTGG +
Preference number: 5 (lower is better)
Translates to: RQSGTPILGMERGKTVEACLLFT*ITGPLW
Trigger: CCACAAGGGCCCCGTGATCAAGGTGAACAGCAAGCA...GGCCTCAACGGTCTTCCCTCTTTCCATCCCCAGAATGGGTGTCCCGCTCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CAA 90 bp ATAGGCACCACCCAAGACCGCAGGCTGGGTGTCTGCAAGGCAGAGCTCCATCTCTGCTTGCTGTTCACCTaGATCACGGGGCCCTTGTGG +
Preference number: 5 (lower is better)
Translates to: IGTTQDRRLGVCKAELHLCLLFT*ITGPLW
Trigger: CCACAAGGGCCCCGTGATCAAGGTGAACAGCAAGCA...GAGATGGAGCTCTGCCTTGCAGACACCCAGCCTGCGGTCTTGGGTGGTGCCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CAA 90 bp GAGGGTCTGGAGGACTCCTGTGGTGCAGGCCATCTCCCGGATAGAGTGCATGGCCCTCTGACACCGCGTTaGAAGCATAGCGTTGCTTGC +
Preference number: 5 (lower is better)
Translates to: EGLEDSCGAGHLPDRVHGPLTPR*KHSVAC
Trigger: GCAAGCAACGCTATGCTTCAAACGCGGTGTCAGAGG...GCCATGCACTCTATCCGGGAGATGGCCTGCACCACAGGAGTCCTCCAGACCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CAA 90 bp GGTGGCCCAGTGCAGAACAGGATCTCTGAAGGCAGAGCGGGACACCCATTCTGGGGGACCTTGACTTTGTaGGCCACCTCTCGGATCAGG +
Preference number: 5 (lower is better)
Translates to: GGPVQNRISEGRAGHPFWGTLTL*ATSRIR
Trigger: CCTGATCCGAGAGGTGGCCAACAAAGTCAAGGTCCC...CCAGAATGGGTGTCCCGCTCTGCCTTCAGAGATCCTGTTCTGCACTGGGCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CAA 90 bp AGGCAGAGCGGGACACCCATTCTGGGGATGGAAAGAGGGAAGACCGTTGAGGCCTCCTGCAGGGGGACCTaGACTTTGTTGGCCACCTCT +
Preference number: 5 (lower is better)
Translates to: RQSGTPILGMERGKTVEASCRGT*TLLATS
Trigger: AGAGGTGGCCAACAAAGTCAAGGTCCCCCTGCAGGA...GGCCTCAACGGTCTTCCCTCTTTCCATCCCCAGAATGGGTGTCCCGCTCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CAA 90 bp AGGACTAGGGGTGGGAGAAGTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCAGCCTGGAGAAGGCGGTaGCGGCATTCAGCCACAGCA +
Preference number: 5 (lower is better)
Translates to: RTRGGRSDLLLEDPVHPSAWRRR*RHSATA
Trigger: TGCTGTGGCTGAATGCCGCAACCGCCTTCTCCAGGC...TGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCACTTCTCCCACCCCTAGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CAA 90 bp CTTGAGTTCACTGAAGCCAGCCTGGAGAAGGCGGTTGCGGCATTCAGCCACAGCATGAGGCTGAAGCCATaGCCAGGAACGTACTGGCCC +
Preference number: 5 (lower is better)
Translates to: LEFTEASLEKAVAAFSHSMRLKP*PGTYWP
Trigger: GGGCCAGTACGTTCCTGGCAATGGCTTCAGCCTCAT...GCTGTGGCTGAATGCCGCAACCGCCTTCTCCAGGCTGGCTTCAGTGAACTCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373966.5
ENST00000519698.1
CDS-3UTR CAA 90 bp TGGGTATGGCTTCCTCGAAGGCTGTCGGGTGCTGGCACGAGGCTGAGATCCGCCAGATGCATCTCTGTGTaGGGCCCAAAGTTCTCGTTG +
Preference number: 5 (lower is better)
Translates to: WVWLPRRLSGAGTRLRSARCISV*GPKFSL
Trigger: CAACGAGAACTTTGGGCCCAACACAGAGATGCATCT...GGCGGATCTCAGCCTCGTGCCAGCACCCGACAGCCTTCGAGGAAGCCATACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CAA 90 bp ATAGGCACCACCCAAGACCGCAGGCTGGGTGTCTGCAAGGCAGAGCTCCATCTCAAGCAGCTGTGCAGATaGTCCAGCCGAGGAGCAAAG +
Preference number: 5 (lower is better)
Translates to: IGTTQDRRLGVCKAELHLKQLCR*SSRGAK
Trigger: CTTTGCTCCTCGGCTGGACAATCTGCACAGCTGCTT...GAGATGGAGCTCTGCCTTGCAGACACCCAGCCTGCGGTCTTGGGTGGTGCCTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CAA 90 bp GAAGGCAGAGCGGGACACCCATTCTGGGGATGGAAAGAGGGAAGACCGTTGAGGTTGATCACGGGGCCCTaGTGGAATAAAGGCCGGTGG +
Preference number: 5 (lower is better)
Translates to: EGRAGHPFWGWKEGRPLRLITGP*WNKGRW
Trigger: CCACCGGCCTTTATTCCACAAGGGCCCCGTGATCAA...CCTCAACGGTCTTCCCTCTTTCCATCCCCAGAATGGGTGTCCCGCTCTGCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CAA 90 bp AGGCAGAGCGGGACACCCATTCTGGGGATGGAAAGAGGGAAGACCGTTGAGGCCCCTCTGACACCGCGTTaGAAGCATAGCGTTGCTTGC +
Preference number: 5 (lower is better)
Translates to: RQSGTPILGMERGKTVEAPLTPR*KHSVAC
Trigger: GCAAGCAACGCTATGCTTCAAACGCGGTGTCAGAGG...GGCCTCAACGGTCTTCCCTCTTTCCATCCCCAGAATGGGTGTCCCGCTCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CAA 90 bp GAAGGCAGAGCGGGACACCCATTCTGGGGATGGAAAGAGGGAAGACCGTTGAGGAGGGGGACCTTGACTTaGTTGGCCACCTCTCGGATC +
Preference number: 5 (lower is better)
Translates to: EGRAGHPFWGWKEGRPLRRGTLT*LATSRI
Trigger: GATCCGAGAGGTGGCCAACAAAGTCAAGGTCCCCCT...CCTCAACGGTCTTCCCTCTTTCCATCCCCAGAATGGGTGTCCCGCTCTGCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CAA 90 bp AGCCTGGAGAAGGCGGTTGCGGCATTCAGCCACAGCATGGAAAGGAGAGGGACTTCCTGCAGGGGGACCTaGACTTTGTTGGCCACCTCT +
Preference number: 5 (lower is better)
Translates to: SLEKAVAAFSHSMERRGTSCRGT*TLLATS
Trigger: AGAGGTGGCCAACAAAGTCAAGGTCCCCCTGCAGGA...AGTCCCTCTCCTTTCCATGCTGTGGCTGAATGCCGCAACCGCCTTCTCCAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373966.5
CDS-3UTR CAA 90 bp CGTCCAGCCAGAGTCAGGTCACGGTCAAACCAGGTGCTCCAGATCCCACCACCAAGCTCAAAGAAGCCCTaGAAGAGGGTGAGGGTCTGG +
Preference number: 5 (lower is better)
Translates to: RPARVRSRSNQVLQIPPPSSKKP*KRVRVW
Trigger: CCAGACCCTCACCCTCTTCAAGGGCTTCTTTGAGCT...TGGTGGTGGGATCTGGAGCACCTGGTTTGACCGTGACCTGACTCTGGCTGGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CAA 90 bp GGTGGCCCAGTGCAGAACAGGATCTCTGAAGGCAGAGCGGGACACCCATTCTGGAAAGAGGGAAGACCGTaGAGGCCATTTCCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: GGPVQNRISEGRAGHPFWKEGRP*RPFPRW
Trigger: CCACCTGGGAAATGGCCTCAACGGTCTTCCCTCTTT...CCAGAATGGGTGTCCCGCTCTGCCTTCAGAGATCCTGTTCTGCACTGGGCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS GCA 90 bp GCCTTACCGTTCATGGCCACCGGGTCCGACGGGTACGGTACAAAGTaGTGTCTCTCGCCACAGCCACCTCGTTTAATCTTCACAACTGCC +
Preference number: 5 (lower is better)
Translates to: ALPFMATGSDGYGTK*CLSPQPPRLIFTTA
Trigger: GGCAGTTGTGAAGATTAAACGAGGTGGCTGTGGCGAGAGACAGCACTTTGTACCGTACCCGTCGGACCCGGTGGCCATGAACGGTAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373972.5
CDS GCA 90 bp CAGTCAGCCCGACCTTCAACCCTCCACCCCCACTCACCTTTCTTTTaGTCCCAAGGGTCTCCTTGGTTTCTTGCGCAACCTCTCCCTGAC +
Preference number: 5 (lower is better)
Translates to: QSARPSTLHPHSPFF*SQGSPWFLAQPLPD
Trigger: GTCAGGGAGAGGTTGCGCAAGAAACCAAGGAGACCCTTGGGAGCAAAAGAAAGGTGAGTGGGGGTGGAGGGTTGAAGGTCGGGCTGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488881.1
CDS GCA 90 bp GCCTTACCGTTCATGGCCACCGGGTCCGACGGGTACGGTACAAAGTaGTGTCTCTCGCCACAGCCACCTAAGTGTGTTCTTTGTACTGCC +
Preference number: 5 (lower is better)
Translates to: ALPFMATGSDGYGTK*CLSPQPPKCVLCTA
Trigger: GGCAGTACAAAGAACACACTTAGGTGGCTGTGGCGAGAGACAGCACTTTGTACCGTACCCGTCGGACCCGGTGGCCATGAACGGTAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519905.1
CDS-3UTR CAA 90 bp TCTGCCCAGAGCAGCTCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGAAGGCCTCCGGTTCACGAACTaGAGGAGTTCCTTAGCCGCA +
Preference number: 5 (lower is better)
Translates to: SAQSSSEGGPVQNRISEGLRFTN*RSSLAA
Trigger: TGCGGCTAAGGAACTCCTCAAGTTCGTGAACCGGAG...GCCTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAGAGCTGCTCTGGGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CAA 90 bp GCCCCGATGAGGCTGAAGCCATTGCCAGGAACGTACTGGCCCCCTACAGCAAAACTCCGGTTCACGAACTaGAGGAGTTCCTTAGCCGCA +
Preference number: 5 (lower is better)
Translates to: APMRLKPLPGTYWPPTAKLRFTN*RSSLAA
Trigger: TGCGGCTAAGGAACTCCTCAAGTTCGTGAACCGGAG...TTTTGCTGTAGGGGGCCAGTACGTTCCTGGCAATGGCTTCAGCCTCATCGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373963.5
ENST00000373966.5
ENST00000519698.1
CDS-3UTR CAA 90 bp GTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCACCCACTTCAGACATGGACTGCCTGGAGAAGGCGGTaGCGGCATTCAGCCACAGCA +
Preference number: 5 (lower is better)
Translates to: VTFCLRIQSTLHPLQTWTAWRRR*RHSATA
Trigger: TGCTGTGGCTGAATGCCGCAACCGCCTTCTCCAGGC...AGTCCATGTCTGAAGTGGGTGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CAA 90 bp TTCAGCCACAGCATGGAAAGGAGAGGGACTCCGGTTCACGAACTTGAGGAGTTCGGTCTCCACACCGACTaGCTGGAAGCCCACCTGGCT +
Preference number: 5 (lower is better)
Translates to: FSHSMERRGTPVHELEEFGLHTD*LEAHLA
Trigger: AGCCAGGTGGGCTTCCAGCAAGTCGGTGTGGAGACC...GAACTCCTCAAGTTCGTGAACCGGAGTCCCTCTCCTTTCCATGCTGTGGCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373966.5
CDS-3UTR CAA 90 bp GCAGATGGATGGCCAGGTGTGGGATGCGAAGAATGGGCCGCTCCACGTGCACCAAGATGCATCTCTGTGTaGGGCCCAAAGTTCTCGTTG +
Preference number: 5 (lower is better)
Translates to: ADGWPGVGCEEWAAPRAPRCISV*GPKFSL
Trigger: CAACGAGAACTTTGGGCCCAACACAGAGATGCATCT...TGGTGCACGTGGAGCGGCCCATTCTTCGCATCCCACACCTGGCCATCCATCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CAA 90 bp GTCCAGCCGAGGAGCAAAGATGAACTCATCATAGGCACCACCCAAGACCGCAGGGGGACCTTGACTTTGTaGGCCACCTCTCGGATCAGG +
Preference number: 5 (lower is better)
Translates to: VQPRSKDELIIGTTQDRRGTLTL*ATSRIR
Trigger: CCTGATCCGAGAGGTGGCCAACAAAGTCAAGGTCCC...CCTGCGGTCTTGGGTGGTGCCTATGATGAGTTCATCTTTGCTCCTCGGCTGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CAA 90 bp GGACTAGGGGTGGGAGAAGTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCACGGGACCTTGACTTTGTaGGCCACCTCTCGGATCAGG +
Preference number: 5 (lower is better)
Translates to: GLGVGEVTFCLRIQSTLHGTLTL*ATSRIR
Trigger: CCTGATCCGAGAGGTGGCCAACAAAGTCAAGGTCCC...GTGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCACTTCTCCCACCCCTAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CAA 90 bp GAAGGCAGAGCGGGACACCCATTCTGGGGATGGAAAGAGGGAAGACCGTTGAGGAAAGAGGGAAGACCGTaGAGGCCATTTCCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: EGRAGHPFWGWKEGRPLRKEGRP*RPFPRW
Trigger: CCACCTGGGAAATGGCCTCAACGGTCTTCCCTCTTT...CCTCAACGGTCTTCCCTCTTTCCATCCCCAGAATGGGTGTCCCGCTCTGCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CAA 90 bp AGAAGAGATTTAAAACCAGATTTAAAACCATCAGCTCCCAGGAGTGTGGCCTCCAGCACCGCGCTAAGCTaGGGCCCCGGAGGGCGCCGG +
Preference number: 5 (lower is better)
Translates to: RRDLKPDLKPSAPRSVASSTALS*GPGGRR
Trigger: CCGGCGCCCTCCGGGGCCCAAGCTTAGCGCGGTGCT...GGAGGCCACACTCCTGGGAGCTGATGGTTTTAAATCTGGTTTTAAATCTCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000520694.6
CDS-3UTR CAA 90 bp GGACTAGGGGTGGGAGAAGTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCACCTCCGGTTCACGAACTaGAGGAGTTCCTTAGCCGCA +
Preference number: 5 (lower is better)
Translates to: GLGVGEVTFCLRIQSTLHLRFTN*RSSLAA
Trigger: TGCGGCTAAGGAACTCCTCAAGTTCGTGAACCGGAG...GTGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCACTTCTCCCACCCCTAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CAA 90 bp GCTGTCCGTGTGGGCCCCGATGAGGCTGAAGCCATTGCCAGGAACGTACTGGCCCTGGTCATGAAGTACTaGCTCTCGGGCTTAATATTC +
Preference number: 5 (lower is better)
Translates to: AVRVGPDEAEAIARNVLALVMKY*LSGLIF
Trigger: GAATATTAAGCCCGAGAGCAAGTACTTCATGACCAG...GGCCAGTACGTTCCTGGCAATGGCTTCAGCCTCATCGGGGCCCACACGGACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CAA 90 bp AGGACTAGGGGTGGGAGAAGTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCAATGAGGCTGAAGCCATaGCCAGGAACGTACTGGCCC +
Preference number: 5 (lower is better)
Translates to: RTRGGRSDLLLEDPVHPSMRLKP*PGTYWP
Trigger: GGGCCAGTACGTTCCTGGCAATGGCTTCAGCCTCAT...TGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCACTTCTCCCACCCCTAGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CAA 90 bp TGGAAAGGAGAGGGACTCCGGTTCACGAACTTGAGGAGTTCCTTAGCCGCAGTCATGAGGCTGAAGCCATaGCCAGGAACGTACTGGCCC +
Preference number: 5 (lower is better)
Translates to: WKGEGLRFTNLRSSLAAVMRLKP*PGTYWP
Trigger: GGGCCAGTACGTTCCTGGCAATGGCTTCAGCCTCAT...GACTGCGGCTAAGGAACTCCTCAAGTTCGTGAACCGGAGTCCCTCTCCTTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373966.5
ENST00000519698.1
CDS-3UTR CAA 90 bp CAAGCCAGGCTCAACTCCCACTCCTCTAGTCTCCAAATAAGCGTAGCACGGAGACCTGAGGTAGGGCACTaGACAATGACGCGTCCAGCC +
Preference number: 5 (lower is better)
Translates to: QARLNSHSSSLQISVARRPEVGH*TMTRPA
Trigger: GGCTGGACGCGTCATTGTCAAGTGCCCTACCTCAGG...TCTCCGTGCTACGCTTATTTGGAGACTAGAGGAGTGGGAGTTGAGCCTGGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CAA 90 bp TTTCTCAGTCTCCTTGAGTTCACTGAAGCCAGCCTGGAGAAGGCGGTTGCGGCATGCTTGCTGTTCACCTaGATCACGGGGCCCTTGTGG +
Preference number: 5 (lower is better)
Translates to: FLSLLEFTEASLEKAVAACLLFT*ITGPLW
Trigger: CCACAAGGGCCCCGTGATCAAGGTGAACAGCAAGCA...TGCCGCAACCGCCTTCTCCAGGCTGGCTTCAGTGAACTCAAGGAGACTGAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373966.5
CDS-3UTR CAA 90 bp AGGACTAGGGGTGGGAGAAGTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCATGCTTGCTGTTCACCTaGATCACGGGGCCCTTGTGG +
Preference number: 5 (lower is better)
Translates to: RTRGGRSDLLLEDPVHPSCLLFT*ITGPLW
Trigger: CCACAAGGGCCCCGTGATCAAGGTGAACAGCAAGCA...TGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCACTTCTCCCACCCCTAGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CAA 90 bp TGGAGGACTAGGGGTGGGAGAAGTGACCTTCTGCTTGAGGATCCAGTCCACCCTCCTCTGACACCGCGTTaGAAGCATAGCGTTGCTTGC +
Preference number: 5 (lower is better)
Translates to: WRTRGGRSDLLLEDPVHPPLTPR*KHSVAC
Trigger: GCAAGCAACGCTATGCTTCAAACGCGGTGTCAGAGG...AGGGTGGACTGGATCCTCAAGCAGAAGGTCACTTCTCCCACCCCTAGTCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CAA 90 bp TGGAAAGGAGAGGGACTCCGGTTCACGAACTTGAGGAGTTCCTTAGCCGCAGTCAGGGGGACCTTGACTTaGTTGGCCACCTCTCGGATC +
Preference number: 5 (lower is better)
Translates to: WKGEGLRFTNLRSSLAAVRGTLT*LATSRI
Trigger: GATCCGAGAGGTGGCCAACAAAGTCAAGGTCCCCCT...GACTGCGGCTAAGGAACTCCTCAAGTTCGTGAACCGGAGTCCCTCTCCTTTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373966.5
CDS-3UTR CAA 90 bp AGGCAGAGCGGGACACCCATTCTGGGGATGGAAAGAGGGAAGACCGTTGAGGCCGAGGTTTTCACCATGTaGGCCAGGCTGGTTTTGAAC +
Preference number: 5 (lower is better)
Translates to: RQSGTPILGMERGKTVEAEVFTM*ARLVLN
Trigger: GTTCAAAACCAGCCTGGCCAACATGGTGAAAACCTC...GGCCTCAACGGTCTTCCCTCTTTCCATCCCCAGAATGGGTGTCCCGCTCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273075.9
CDS-3UTR CAA 90 bp TGGAAAGGAGAGGGACTCCGGTTCACGAACTTGAGGAGTTCCTTAGCCGCAGTCAACCGTGTGCCTTTTTaGCCGGATCCTTCCCCTGCC +
Preference number: 5 (lower is better)
Translates to: WKGEGLRFTNLRSSLAAVNRVPF*PDPSPA
Trigger: GGCAGGGGAAGGATCCGGCAAAAAAGGCACACGGTT...GACTGCGGCTAAGGAACTCCTCAAGTTCGTGAACCGGAGTCCCTCTCCTTTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519698.1
CDS-3UTR CAA 90 bp TCTCCAGCTCCTCCTGGATGGCTGTGGCAAGAATGGGGACTAGATGCATCTCTGCTCCGGTTCACGAACTaGAGGAGTTCCTTAGCCGCA +
Preference number: 5 (lower is better)
Translates to: SPAPPGWLWQEWGLDASLLRFTN*RSSLAA
Trigger: TGCGGCTAAGGAACTCCTCAAGTTCGTGAACCGGAG...CAGAGATGCATCTAGTCCCCATTCTTGCCACAGCCATCCAGGAGGAGCTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CAA 90 bp CTGCTCCCCAACTTTTCTGGTTCCAAAGGTTCAAGCCAGGCTCAACTCCCACTCATGAGGCTGAAGCCATaGCCAGGAACGTACTGGCCC +
Preference number: 5 (lower is better)
Translates to: LLPNFSGSKGSSQAQLPLMRLKP*PGTYWP
Trigger: GGGCCAGTACGTTCCTGGCAATGGCTTCAGCCTCAT...GAGTGGGAGTTGAGCCTGGCTTGAACCTTTGGAACCAGAAAAGTTGGGGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CAA 90 bp TCTGAAGGTGGCCCAGTGCAGAACAGGATCTCTGAAGGCAGAGCGGGACACCCAAGATGCATCTCTGTGTaGGGCCCAAAGTTCTCGTTG +
Preference number: 5 (lower is better)
Translates to: SEGGPVQNRISEGRAGHPRCISV*GPKFSL
Trigger: CAACGAGAACTTTGGGCCCAACACAGAGATGCATCT...TGGGTGTCCCGCTCTGCCTTCAGAGATCCTGTTCTGCACTGGGCCACCTTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CAA 90 bp ATGCACAGCATGGGCCATGTCTGCGCTGATCATGAAGGACTTGGGTATGGCTTCTTGATCACGGGGCCCTaGTGGAATAAAGGCCGGTGG +
Preference number: 5 (lower is better)
Translates to: MHSMGHVCADHEGLGYGFLITGP*WNKGRW
Trigger: CCACCGGCCTTTATTCCACAAGGGCCCCGTGATCAA...GAAGCCATACCCAAGTCCTTCATGATCAGCGCAGACATGGCCCATGCTGTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CAA 90 bp CTGAAGCCATTGCCAGGAACGTACTGGCCCCCTACAGCAAAAGCTATGATGGTGTTGATCACGGGGCCCTaGTGGAATAAAGGCCGGTGG +
Preference number: 5 (lower is better)
Translates to: LKPLPGTYWPPTAKAMMVLITGP*WNKGRW
Trigger: CCACCGGCCTTTATTCCACAAGGGCCCCGTGATCAA...CACCATCATAGCTTTTGCTGTAGGGGGCCAGTACGTTCCTGGCAATGGCTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CAA 90 bp GTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCACCCACTTCAGACATGGACTAGGGGGACCTTGACTTaGTTGGCCACCTCTCGGATC +
Preference number: 5 (lower is better)
Translates to: VTFCLRIQSTLHPLQTWTRGTLT*LATSRI
Trigger: GATCCGAGAGGTGGCCAACAAAGTCAAGGTCCCCCT...AGTCCATGTCTGAAGTGGGTGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CAA 90 bp GTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCACCCACTTCAGACATGGACTTCCTGCAGGGGGACCTaGACTTTGTTGGCCACCTCT +
Preference number: 5 (lower is better)
Translates to: VTFCLRIQSTLHPLQTWTSCRGT*TLLATS
Trigger: AGAGGTGGCCAACAAAGTCAAGGTCCCCCTGCAGGA...AGTCCATGTCTGAAGTGGGTGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CAA 90 bp GCTGAAGCCATTGCCAGGAACGTACTGGCCCCCTACAGCAAAAGCTATGATGGTTCCTGCAGGGGGACCTaGACTTTGTTGGCCACCTCT +
Preference number: 5 (lower is better)
Translates to: AEAIARNVLAPYSKSYDGSCRGT*TLLATS
Trigger: AGAGGTGGCCAACAAAGTCAAGGTCCCCCTGCAGGA...ACCATCATAGCTTTTGCTGTAGGGGGCCAGTACGTTCCTGGCAATGGCTTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CAA 90 bp TTCTCAGTCTCCTTGAGTTCACTGAAGCCAGCCTGGAGAAGGCGGTTGCGGCATCCATTGAGCCAGCTGTaGGGGACGAACATGATGGAG +
Preference number: 5 (lower is better)
Translates to: FSVSLSSLKPAWRRRLRHPLSQL*GTNMME
Trigger: CTCCATCATGTTCGTCCCCAACAGCTGGCTCAATGG...ATGCCGCAACCGCCTTCTCCAGGCTGGCTTCAGTGAACTCAAGGAGACTGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519698.1
CDS-3UTR CAA 90 bp CCAGGTGCTCCAGATCCCACCACCATAGGTCTCCACACCGACTTGCTGGAAGCCCTGGTCATGAAGTACTaGCTCTCGGGCTTAATATTC +
Preference number: 5 (lower is better)
Translates to: PGAPDPTTIGLHTDLLEALVMKY*LSGLIF
Trigger: GAATATTAAGCCCGAGAGCAAGTACTTCATGACCAG...GGCTTCCAGCAAGTCGGTGTGGAGACCTATGGTGGTGGGATCTGGAGCACCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373963.5
ENST00000373966.5
CDS-3UTR CAA 90 bp CAAGCCAGGCTCAACTCCCACTCCTCTAGTCTCCAAATAAGCGTAGCACGGAGAAAGCAGCTGTGCAGATaGTCCAGCCGAGGAGCAAAG +
Preference number: 5 (lower is better)
Translates to: QARLNSHSSSLQISVARRKQLCR*SSRGAK
Trigger: CTTTGCTCCTCGGCTGGACAATCTGCACAGCTGCTT...TCTCCGTGCTACGCTTATTTGGAGACTAGAGGAGTGGGAGTTGAGCCTGGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CAA 90 bp CAAGCCAGGCTCAACTCCCACTCCTCTAGTCTCCAAATAAGCGTAGCACGGAGAAGCTCAAAGAAGCCCTaGAAGAGGGTGAGGGTCTGG +
Preference number: 5 (lower is better)
Translates to: QARLNSHSSSLQISVARRSSKKP*KRVRVW
Trigger: CCAGACCCTCACCCTCTTCAAGGGCTTCTTTGAGCT...TCTCCGTGCTACGCTTATTTGGAGACTAGAGGAGTGGGAGTTGAGCCTGGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS TCA 90 bp GGGCACAGAAGCAGCTGTGCAGATTGTCCAGCCGAGGAGCAAAGATaGACTCATCATAGGCACCACCCAAGACCTAGAGAGGTAAGACAG +
Preference number: 5 (lower is better)
Translates to: GHRSSCADCPAEEQR*THHRHHPRPREVRQ
Trigger: CTGTCTTACCTCTCTAGGTCTTGGGTGGTGCCTATGATGAGTTCATCTTTGCTCCTCGGCTGGACAATCTGCACAGCTGCTTCTGTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488881.1
CDS-3UTR CAA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCGCCTGGAGAAGGCGGTaGCGGCATTCAGCCACAGCA +
Preference number: 5 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLAWRRR*RHSATA
Trigger: TGCTGTGGCTGAATGCCGCAACCGCCTTCTCCAGGC...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273075.9
ENST00000373966.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR CAA 90 bp GCCCCGATGAGGCTGAAGCCATTGCCAGGAACGTACTGGCCCCCTACAGCAAAACTGGTCATGAAGTACTaGCTCTCGGGCTTAATATTC +
Preference number: 5 (lower is better)
Translates to: APMRLKPLPGTYWPPTAKLVMKY*LSGLIF
Trigger: GAATATTAAGCCCGAGAGCAAGTACTTCATGACCAG...TTTTGCTGTAGGGGGCCAGTACGTTCCTGGCAATGGCTTCAGCCTCATCGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373963.5
ENST00000373966.5
ENST00000519698.1
CDS-3UTR CAA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCGGTCTCCACACCGACTaGCTGGAAGCCCACCTGGCT +
Preference number: 5 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLGLHTD*LEAHLA
Trigger: AGCCAGGTGGGCTTCCAGCAAGTCGGTGTGGAGACC...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS TCA 90 bp GGGCACAGAAGCAGCTGTGCAGATTGTCCAGCCGAGGAGCAAAGATaGACTCATCATAGGCACCACCCAAGACAGATGCATCTCTGTGTT +
Preference number: 5 (lower is better)
Translates to: GHRSSCADCPAEEQR*THHRHHPRQMHLCV
Trigger: AACACAGAGATGCATCTGTCTTGGGTGGTGCCTATGATGAGTTCATCTTTGCTCCTCGGCTGGACAATCTGCACAGCTGCTTCTGTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521459.5
CDS GCA 90 bp TACTGCCCAGAGGTCCTATTGCATCTCCTGGGCCATTTGCTTCTTTaGTTTCCTGGAGGAGAGTTTCATCCAGTGTCTTCCTCCATCCCC +
Preference number: 5 (lower is better)
Translates to: YCPEVLLHLLGHLLL*FPGGEFHPVSSSIP
Trigger: GGGGATGGAGGAAGACACTGGATGAAACTCTCCTCCAGGAAAGCAAAGAAGCAAATGGCCCAGGAGATGCAATAGGACCTCTGGGCAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519905.1
CDS CCA 90 bp GGCCTTACCGTTCATGGCCACCTGAAACTCCTGATTTGGAAGATTTaGGCTGAGGCCCAGGGATCTCCACTTTTAACAGGTGCTTGTGGT +
Preference number: 5 (lower is better)
Translates to: GLTVHGHLKLLIWKI*AEAQGSPLLTGACG
Trigger: ACCACAAGCACCTGTTAAAAGTGGAGATCCCTGGGCCTCAGCCCAAATCTTCCAAATCAGGAGTTTCAGGTGGCCATGAACGGTAAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519698.1
CDS CCA 90 bp CTCTTTGCGGGCCTTACCGTTCATGGCCACCTGAAACTCCTGATTTaGAAGATTTGGGCTGAGGCCCAGGGATCTCCACTTTTAACAGGT +
Preference number: 5 (lower is better)
Translates to: LFAGLTVHGHLKLLI*KIWAEAQGSPLLTG
Trigger: ACCTGTTAAAAGTGGAGATCCCTGGGCCTCAGCCCAAATCTTCCAAATCAGGAGTTTCAGGTGGCCATGAACGGTAAGGCCCGCAAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519698.1
CDS-3UTR CAA 90 bp AGAAGAGATTTAAAACCAGATTTAAAACCATCAGCTCCCAGGAGTGTGGCCTCCGGTCTCCACACCGACTaGCTGGAAGCCCACCTGGCT +
Preference number: 5 (lower is better)
Translates to: RRDLKPDLKPSAPRSVASGLHTD*LEAHLA
Trigger: AGCCAGGTGGGCTTCCAGCAAGTCGGTGTGGAGACC...GGAGGCCACACTCCTGGGAGCTGATGGTTTTAAATCTGGTTTTAAATCTCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CAA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCCCTGAGGTAGGGCACTaGACAATGACGCGTCCAGCC +
Preference number: 5 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLPEVGH*TMTRPA
Trigger: GGCTGGACGCGTCATTGTCAAGTGCCCTACCTCAGG...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR CAA 90 bp GTTCAAGCCAGGCTCAACTCCCACTCCTCTAGTCTCCAAATAAGCGTAGCACGGAGATGCATCTCTGTGTaGGGCCCAAAGTTCTCGTTG +
Preference number: 5 (lower is better)
Translates to: VQARLNSHSSSLQISVARRCISV*GPKFSL
Trigger: CAACGAGAACTTTGGGCCCAACACAGAGATGCATCT...CCGTGCTACGCTTATTTGGAGACTAGAGGAGTGGGAGTTGAGCCTGGCTTGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CAA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCCGCTCATCCACAGCATaGAGAGGCCCTGGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLRSSTA*RGPGSG
Trigger: TCCTGAGCCAGGGCCTCTCAATGCTGTGGATGAGCG...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS TCA 90 bp GCTGGGTTGGTGCTGAGGAACAAAAGGGTGGAGGCCAATAGCTCTTaGCCTCTTCCTGTGGGTCAAGAAAAGGAAGGGCTGAATTGTCAT +
Preference number: 5 (lower is better)
Translates to: AGLVLRNKRVEANSS*PLPVGQEKEGLNCH
Trigger: ATGACAATTCAGCCCTTCCTTTTCTTGACCCACAGGAAGAGGTCAAGAGCTATTGGCCTCCACCCTTTTGTTCCTCAGCACCAACCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460963.5
CDS CCA 90 bp AGAGGTCCTATTGCATCTCCTGGGCCATTTGCTTCTTTGCTTTCCTaGAGGAGAGTTTCATCCAGTGTCTTCCTCCATCCCCACTCTCAG +
Preference number: 5 (lower is better)
Translates to: RGPIASPGPFASLLS*RRVSSSVFLHPHSQ
Trigger: CTGAGAGTGGGGATGGAGGAAGACACTGGATGAAACTCTCCTCCAGGAAAGCAAAGAAGCAAATGGCCCAGGAGATGCAATAGGACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519905.1
CDS-3UTR CAA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCATGAGGCTGAAGCCATaGCCAGGAACGTACTGGCCC +
Preference number: 5 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLMRLKP*PGTYWP
Trigger: GGGCCAGTACGTTCCTGGCAATGGCTTCAGCCTCAT...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR CAA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCTTGATCACGGGGCCCTaGTGGAATAAAGGCCGGTGG +
Preference number: 5 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLLITGP*WNKGRW
Trigger: CCACCGGCCTTTATTCCACAAGGGCCCCGTGATCAA...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR CAA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCTGCTTGCTGTTCACCTaGATCACGGGGCCCTTGTGG +
Preference number: 5 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLCLLFT*ITGPLW
Trigger: CCACAAGGGCCCCGTGATCAAGGTGAACAGCAAGCA...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR CAA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCGGGACCTTGACTTTGTaGGCCACCTCTCGGATCAGG +
Preference number: 5 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLGTLTL*ATSRIR
Trigger: CCTGATCCGAGAGGTGGCCAACAAAGTCAAGGTCCC...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR CAA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCAGGGGGACCTTGACTTaGTTGGCCACCTCTCGGATC +
Preference number: 5 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLRGTLT*LATSRI
Trigger: GATCCGAGAGGTGGCCAACAAAGTCAAGGTCCCCCT...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR CAA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCTCCTGCAGGGGGACCTaGACTTTGTTGGCCACCTCT +
Preference number: 5 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLSCRGT*TLLATS
Trigger: AGAGGTGGCCAACAAAGTCAAGGTCCCCCTGCAGGA...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR CAA 90 bp AAGGTTCAAGCCAGGCTCAACTCCCACTCCTCTAGTCTCCAAATAAGCGTAGCAGCAACCTACGCCTCCTaGGTTCAAGCTATTCTCCTG +
Preference number: 5 (lower is better)
Translates to: KVQARLNSHSSSLQISVAATYAS*VQAILL
Trigger: CAGGAGAATAGCTTGAACCAAGGAGGCGTAGGTTGC...TGCTACGCTTATTTGGAGACTAGAGGAGTGGGAGTTGAGCCTGGCTTGAACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273075.9
CDS-3UTR CAA 90 bp AAGGTTCAAGCCAGGCTCAACTCCCACTCCTCTAGTCTCCAAATAAGCGTAGCAAAGGCTAAGGCCCTTTaGTCACTCCCAACCCAGAAG +
Preference number: 5 (lower is better)
Translates to: KVQARLNSHSSSLQISVAKAKAL*SLPTQK
Trigger: CTTCTGGGTTGGGAGTGACAAAAGGGCCTTAGCCTT...TGCTACGCTTATTTGGAGACTAGAGGAGTGGGAGTTGAGCCTGGCTTGAACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273075.9
CDS-3UTR CAA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCAACCGTGTGCCTTTTTaGCCGGATCCTTCCCCTGCC +
Preference number: 5 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLNRVPF*PDPSPA
Trigger: GGCAGGGGAAGGATCCGGCAAAAAAGGCACACGGTT...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000523282.5
CDS CCA 90 bp ATCTGTAAAAAGGGCCAATTCCCAGATAGTCCTAGTGGGCAGGTCTaGGGTAGGGAACTTGTCTTTTTGAGAACCACCGCCCTAGAAGCA +
Preference number: 5 (lower is better)
Translates to: ICKKGQFPDSPSGQV*GRELVFLRTTALEA
Trigger: TGCTTCTAGGGCGGTGGTTCTCAAAAAGACAAGTTCCCTACCCCAGACCTGCCCACTAGGACTATCTGGGAATTGGCCCTTTTTACAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000460963.5
ENST00000522421.1
CDS CCA 90 bp AGTGTGGGTCAAAGCAGACAGGGCCCACCTGTAGAAGAAACTCTTTaGGAATCTGTAAAAAGGGCCAATTCCCAGATAGTCCTAGTGGGC +
Preference number: 5 (lower is better)
Translates to: SVGQSRQGPPVEETL*ESVKRANSQIVLVG
Trigger: GCCCACTAGGACTATCTGGGAATTGGCCCTTTTTACAGATTCCCAAAGAGTTTCTTCTACAGGTGGGCCCTGTCTGCTTTGACCCACACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460963.5
CDS-3UTR CAA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCCTCCGGTTCACGAACTaGAGGAGTTCCTTAGCCGCA +
Preference number: 5 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLLRFTN*RSSLAA
Trigger: TGCGGCTAAGGAACTCCTCAAGTTCGTGAACCGGAG...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR CAA 90 bp CTGCTCCCCAACTTTTCTGGTTCCAAAGGTTCAAGCCAGGCTCAACTCCCACTCCTGGTCATGAAGTACTaGCTCTCGGGCTTAATATTC +
Preference number: 5 (lower is better)
Translates to: LLPNFSGSKGSSQAQLPLLVMKY*LSGLIF
Trigger: GAATATTAAGCCCGAGAGCAAGTACTTCATGACCAG...GAGTGGGAGTTGAGCCTGGCTTGAACCTTTGGAACCAGAAAAGTTGGGGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CAA 90 bp AGTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCACCCACTTCAGACATGGACCTGGTCATGAAGTACTaGCTCTCGGGCTTAATATTC +
Preference number: 5 (lower is better)
Translates to: SDLLLEDPVHPSPTSDMDLVMKY*LSGLIF
Trigger: GAATATTAAGCCCGAGAGCAAGTACTTCATGACCAG...GTCCATGTCTGAAGTGGGTGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CAA 90 bp TATAATGTTTTGAAGGTACTCCTTGTCCTGTGTCCAGTTCTGCAACCTGCCTTTCGCTCATCCACAGCATaGAGAGGCCCTGGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: YNVLKVLLVLCPVLQPAFRSSTA*RGPGSG
Trigger: TCCTGAGCCAGGGCCTCTCAATGCTGTGGATGAGCG...AAAGGCAGGTTGCAGAACTGGACACAGGACAAGGAGTACCTTCAAAACATTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273075.9
CDS-3UTR CAA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCAAGCAGCTGTGCAGATaGTCCAGCCGAGGAGCAAAG +
Preference number: 5 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLKQLCR*SSRGAK
Trigger: CTTTGCTCCTCGGCTGGACAATCTGCACAGCTGCTT...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR CAA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCCCTCTGACACCGCGTTaGAAGCATAGCGTTGCTTGC +
Preference number: 5 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLPLTPR*KHSVAC
Trigger: GCAAGCAACGCTATGCTTCAAACGCGGTGTCAGAGG...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR CAA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCAGCTCAAAGAAGCCCTaGAAGAGGGTGAGGGTCTGG +
Preference number: 5 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLSSKKP*KRVRVW
Trigger: CCAGACCCTCACCCTCTTCAAGGGCTTCTTTGAGCT...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR CAA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCCCATTGAGCCAGCTGTaGGGGACGAACATGATGGAG +
Preference number: 5 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLPLSQL*GTNMME
Trigger: CTCCATCATGTTCGTCCCCAACAGCTGGCTCAATGG...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523282.5
CDS GCA 90 bp GTTCTTTGTACTGCCCAGAGGTCCTATTGCATCTCCTGGGCCATTTaGTTCTTTGCTTTCCTGGAGGAGAGTTTCATCCAGTGTCTTCCT +
Preference number: 5 (lower is better)
Translates to: VLCTAQRSYCISWAI*FFAFLEESFIQCLP
Trigger: AGGAAGACACTGGATGAAACTCTCCTCCAGGAAAGCAAAGAAGCAAATGGCCCAGGAGATGCAATAGGACCTCTGGGCAGTACAAAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519905.1
CDS-3UTR CAA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCGAAGTGACCTTCTGCTaGAGGATCCAGTCCACCCTT +
Preference number: 5 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLEVTFC*RIQSTL
Trigger: AAGGGTGGACTGGATCCTCAAGCAGAAGGTCACTTC...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273075.9
ENST00000520694.6
CDS-3UTR CAA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCAGATGCATCTCTGTGTaGGGCCCAAAGTTCTCGTTG +
Preference number: 5 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLRCISV*GPKFSL
Trigger: CAACGAGAACTTTGGGCCCAACACAGAGATGCATCT...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR CAA 90 bp CAAGCCAGGCTCAACTCCCACTCCTCTAGTCTCCAAATAAGCGTAGCACGGAGATGGAAGGACACCAGTTaGCACAATTATTTTAGTGGA +
Preference number: 5 (lower is better)
Translates to: QARLNSHSSSLQISVARRWKDTS*HNYFSG
Trigger: TCCACTAAAATAATTGTGCAAACTGGTGTCCTTCCA...TCTCCGTGCTACGCTTATTTGGAGACTAGAGGAGTGGGAGTTGAGCCTGGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273075.9
CDS-3UTR CAA 90 bp TATAATGTTTTGAAGGTACTCCTTGTCCTGTGTCCAGTTCTGCAACCTGCCTTTGAAGTGACCTTCTGCTaGAGGATCCAGTCCACCCTT +
Preference number: 5 (lower is better)
Translates to: YNVLKVLLVLCPVLQPAFEVTFC*RIQSTL
Trigger: AAGGGTGGACTGGATCCTCAAGCAGAAGGTCACTTC...AAAGGCAGGTTGCAGAACTGGACACAGGACAAGGAGTACCTTCAAAACATTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273075.9
CDS-3UTR CAA 90 bp GTGACCTTCTGCTTGAGGATCCAGTCCACCCTTCACCCACTTCAGACATGGACTATAGTGTATTTGGGCTaGCCTTTACTGAGAAATCTT +
Preference number: 5 (lower is better)
Translates to: VTFCLRIQSTLHPLQTWTIVYLG*PLLRNL
Trigger: AAGATTTCTCAGTAAAGGCAAGCCCAAATACACTAT...AGTCCATGTCTGAAGTGGGTGAAGGGTGGACTGGATCCTCAAGCAGAAGGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273075.9
CDS-3UTR CAA 90 bp GTGACAATCCACTTTAATAATCCAGCTTCAGCTCAGCTGAGAACTTCCCCTCTCCTGGTCATGAAGTACTaGCTCTCGGGCTTAATATTC +
Preference number: 5 (lower is better)
Translates to: VTIHFNNPASAQLRTSPLLVMKY*LSGLIF
Trigger: GAATATTAAGCCCGAGAGCAAGTACTTCATGACCAG...GAGAGGGGAAGTTCTCAGCTGAGCTGAAGCTGGATTATTAAAGTGGATTGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000373963.5
ENST00000373966.5
ENST00000373972.5
ENST00000520694.6
ENST00000523282.5
CDS-3UTR CAA 90 bp AGAAGAGATTTAAAACCAGATTTAAAACCATCAGCTCCCAGGAGTGTGGCCTCCGTGGAAGGAAGGAGGTaGGTTTATAAGCAGGCTTTG +
Preference number: 5 (lower is better)
Translates to: RRDLKPDLKPSAPRSVASVEGRR*VYKQAL
Trigger: CAAAGCCTGCTTATAAACCAACCTCCTTCCTTCCAC...GGAGGCCACACTCCTGGGAGCTGATGGTTTTAAATCTGGTTTTAAATCTCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273075.9
CDS TCA 90 bp CCAATAGCTCTTGACCTCTTCCTGTGGGTCAAGAAAAGGAAGGGCTaGATTGTCATCAAAAAGGCCAAAGAAGTAAACAGAGGAAACCAG +
Preference number: 5 (lower is better)
Translates to: PIALDLFLWVKKRKG*IVIKKAKEVNRGNQ
Trigger: CTGGTTTCCTCTGTTTACTTCTTTGGCCTTTTTGATGACAATTCAGCCCTTCCTTTTCTTGACCCACAGGAAGAGGTCAAGAGCTATTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460963.5
CDS CCA 72 bp GCCGTCGGGAGCCACTTACCTGCATGGCCCCGCGCGTaGGGCTGTGTCCGCTCATCTGGCCTCCGGGCTCGG +
Preference number: 6 (lower is better)
Translates to: AVGSHLPAWPRA*GCVRSSGLRAR
Trigger: CCGAGCCCGGAGGCCAGATGAGCGGACACAGCCCCACGCGCGGGGCCATGCAGGTAAGTGGCTCCCGACGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373966.5
CDS GCA 72 bp GGGCTTTCGGTTTCGCTTTGGGTCAGGCGGCCCCACTaGAGCACCGCGCTAAGCTTGGGCCCCGGAGGGCGC +
Preference number: 6 (lower is better)
Translates to: GLSVSLWVRRPH*STALSLGPGGR
Trigger: GCGCCCTCCGGGGCCCAAGCTTAGCGCGGTGCTGCAGTGGGGCCGCCTGACCCAAAGCGAAACCGAAAGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373966.5
ENST00000520694.6
CDS CCA 72 bp CCTTACCGTTCATGGCCACCTGCATGGCCCCGCGCGTaGGGCTGTGTCCGCTCATCTGGCCTCCGGGCTCGG +
Preference number: 6 (lower is better)
Translates to: PYRSWPPAWPRA*GCVRSSGLRAR
Trigger: CCGAGCCCGGAGGCCAGATGAGCGGACACAGCCCCACGCGCGGGGCCATGCAGGTGGCCATGAACGGTAAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273075.9
ENST00000322176.11
ENST00000373963.5
ENST00000521459.5
ENST00000523527.5
CDS CCA 72 bp GCTAAGCTTGGGCCCCGGAGGGCGCCGGACCCGGTCTaGGATCGAAATTCAAGTGGGGCCGTCGGGAGCCAC +
Preference number: 6 (lower is better)
Translates to: AKLGPRRAPDPV*DRNSSGAVGSH
Trigger: GTGGCTCCCGACGGCCCCACTTGAATTTCGATCCCAGACCGGGTCCGGCGCCCTCCGGGGCCCAAGCTTAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373966.5
ENST00000520694.6
CDS CAA 90 bp CGGGAAAGTCGTCAGGTCACCCTCCGCGGGGCTTTCGGTTTCGCTTaGGGTCAGGCGGCCCCACTGCAGCACCGCGCTAAGCTTGGGCCC +
Preference number: 6 (lower is better)
Translates to: RESRQVTLRGAFGFA*GQAAPLQHRAKLGP
Trigger: GGGCCCAAGCTTAGCGCGGTGCTGCAGTGGGGCCGCCTGACCCAAAGCGAAACCGAAAGCCCCGCGGAGGGTGACCTGACGACTTTCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373966.5
ENST00000520694.6
CDS CCA 72 bp GAGGGCGCCGGACCCGGTCTGGGATCGAAATTCAAGTaGGGCCGTCGGGAGCCACTTACCTGCATGGCCCCG +
Preference number: 6 (lower is better)
Translates to: EGAGPGLGSKFK*GRREPLTCMAP
Trigger: CGGGGCCATGCAGGTAAGTGGCTCCCGACGGCCCCACTTGAATTTCGATCCCAGACCGGGTCCGGCGCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373966.5
ENST00000520694.6
CDS CCA 72 bp GTCAGGTCACCCTCCGCGGGGCTTTCGGTTTCGCTTTaGGTCAGGCGGCCCCACTGCAGCACCGCGCTAAGC +
Preference number: 6 (lower is better)
Translates to: VRSPSAGLSVSL*VRRPHCSTALS
Trigger: GCTTAGCGCGGTGCTGCAGTGGGGCCGCCTGACCCAAAGCGAAACCGAAAGCCCCGCGGAGGGTGACCTGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373966.5
ENST00000520694.6
CDS CAA 72 bp CGTCAGGTCACCCTCCGCGGGGCTTTCGGTTTCGCTTaGGGTCAGGCGGCCCCACTGCAGCACCGCGCTAAG +
Preference number: 6 (lower is better)
Translates to: RQVTLRGAFGFA*GQAAPLQHRAK
Trigger: CTTAGCGCGGTGCTGCAGTGGGGCCGCCTGACCCAAAGCGAAACCGAAAGCCCCGCGGAGGGTGACCTGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373966.5
ENST00000520694.6
CDS CAA 90 bp GTTTCGCTTTGGGTCAGGCGGCCCCACTGCAGCACCGCGCTAAGCTaGGGCCCCGGAGGGCGCCGGACCCGGTCTGGGATCGAAATTCAA +
Preference number: 6 (lower is better)
Translates to: VSLWVRRPHCSTALS*GPGGRRTRSGIEIQ
Trigger: TTGAATTTCGATCCCAGACCGGGTCCGGCGCCCTCCGGGGCCCAAGCTTAGCGCGGTGCTGCAGTGGGGCCGCCTGACCCAAAGCGAAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373966.5
ENST00000520694.6
CDS CAA 90 bp TTCACGAACTTGAGGAGTTCCTTAGCCGCAGTCTGCACCGCCTCTTaGCGGGCCTTACCGTTCATGGCCACCTGCATGGCCCCGCGCGTG +
Preference number: 6 (lower is better)
Translates to: FTNLRSSLAAVCTAS*RALPFMATCMAPRV
Trigger: CACGCGCGGGGCCATGCAGGTGGCCATGAACGGTAAGGCCCGCAAAGAGGCGGTGCAGACTGCGGCTAAGGAACTCCTCAAGTTCGTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000322176.11
ENST00000373963.5
ENST00000460963.5
ENST00000521459.5
ENST00000523527.5
CDS CAA 72 bp TTGAGGAGTTCCTTAGCCGCAGTCTGCACCGCCTCTTaGCGGGCCTTACCGTTCATGGCCACCGGGTCCGAC +
Preference number: 6 (lower is better)
Translates to: LRSSLAAVCTAS*RALPFMATGSD
Trigger: GTCGGACCCGGTGGCCATGAACGGTAAGGCCCGCAAAGAGGCGGTGCAGACTGCGGCTAAGGAACTCCTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373972.5
ENST00000519905.1
CDS CAA 90 bp TTCACGAACTTGAGGAGTTCCTTAGCCGCAGTCTGCACCGCCTCTTaGCGGGCCTTACCGTTCATGGCCACCGGGTCCGACGGGTACGGT +
Preference number: 6 (lower is better)
Translates to: FTNLRSSLAAVCTAS*RALPFMATGSDGYG
Trigger: ACCGTACCCGTCGGACCCGGTGGCCATGAACGGTAAGGCCCGCAAAGAGGCGGTGCAGACTGCGGCTAAGGAACTCCTCAAGTTCGTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373972.5
ENST00000519905.1
CDS CAA 90 bp TTCACGAACTTGAGGAGTTCCTTAGCCGCAGTCTGCACCGCCTCTTaGCGGGCCTTACCGTTCATGGCCACCTCTGCTTCCGCCCGTCCC +
Preference number: 6 (lower is better)
Translates to: FTNLRSSLAAVCTAS*RALPFMATSASARP
Trigger: GGGACGGGCGGAAGCAGAGGTGGCCATGAACGGTAAGGCCCGCAAAGAGGCGGTGCAGACTGCGGCTAAGGAACTCCTCAAGTTCGTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429013.5
ENST00000430206.5
CDS CAA 72 bp TTGAGGAGTTCCTTAGCCGCAGTCTGCACCGCCTCTTaGCGGGCCTTACCGTTCATGGCCACCTGCATGGCC +
Preference number: 6 (lower is better)
Translates to: LRSSLAAVCTAS*RALPFMATCMA
Trigger: GGCCATGCAGGTGGCCATGAACGGTAAGGCCCGCAAAGAGGCGGTGCAGACTGCGGCTAAGGAACTCCTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273075.9
ENST00000322176.11
ENST00000373963.5
ENST00000460963.5
ENST00000521459.5
ENST00000523527.5
CDS CCA 72 bp ACCCACAGGTTCCTACAGCCAGTCCTCACCGCAGGCTaGGTGTCTGCAAGGCAGAGCTCCATCTCCACTATG +
Preference number: 6 (lower is better)
Translates to: THRFLQPVLTAG*VSARQSSISTM
Trigger: CATAGTGGAGATGGAGCTCTGCCTTGCAGACACCCAGCCTGCGGTGAGGACTGGCTGTAGGAACCTGTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460963.5
ENST00000522421.1
CDS CAA 72 bp TTGAGGAGTTCCTTAGCCGCAGTCTGCACCGCCTCTTaGCGGGCCTTACCGTTCATGGCCACCTCTGCTTCC +
Preference number: 6 (lower is better)
Translates to: LRSSLAAVCTAS*RALPFMATSAS
Trigger: GGAAGCAGAGGTGGCCATGAACGGTAAGGCCCGCAAAGAGGCGGTGCAGACTGCGGCTAAGGAACTCCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429013.5
ENST00000430206.5
CDS CAA 72 bp TTGAGGAGTTCCTTAGCCGCAGTCTGCACCGCCTCTTaGCGGGCCTTACCGTTCATGGCCACCTCCTCCCAA +
Preference number: 6 (lower is better)
Translates to: LRSSLAAVCTAS*RALPFMATSSQ
Trigger: TTGGGAGGAGGTGGCCATGAACGGTAAGGCCCGCAAAGAGGCGGTGCAGACTGCGGCTAAGGAACTCCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434339.5
CDS CAA 90 bp TTCACGAACTTGAGGAGTTCCTTAGCCGCAGTCTGCACCGCCTCTTaGCGGGCCTTACCGTTCATGGCCACCTCCTCCCAAGGCTGGAGT +
Preference number: 6 (lower is better)
Translates to: FTNLRSSLAAVCTAS*RALPFMATSSQGWS
Trigger: ACTCCAGCCTTGGGAGGAGGTGGCCATGAACGGTAAGGCCCGCAAAGAGGCGGTGCAGACTGCGGCTAAGGAACTCCTCAAGTTCGTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434339.5
CDS CCA 72 bp GCTAGGCAGGACCAAGCAGAGATTGGAGAAGGGGGCTaGGTTGGTGCTGAGGAACAAAAGGGTGGAGGCCAA +
Preference number: 6 (lower is better)
Translates to: ARQDQAEIGEGG*VGAEEQKGGGQ
Trigger: TTGGCCTCCACCCTTTTGTTCCTCAGCACCAACCCAGCCCCCTTCTCCAATCTCTGCTTGGTCCTGCCTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460963.5
CDS GCA 72 bp TTCATGGCCACCGGGTCCGACGGGTACGGTACAAAGTaGTGTCTCTCGCCACAGCCACCTCGTTTAATCTTC +
Preference number: 6 (lower is better)
Translates to: FMATGSDGYGTK*CLSPQPPRLIF
Trigger: GAAGATTAAACGAGGTGGCTGTGGCGAGAGACAGCACTTTGTACCGTACCCGTCGGACCCGGTGGCCATGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373972.5
CDS GCA 72 bp TTCATGGCCACCGGGTCCGACGGGTACGGTACAAAGTaGTGTCTCTCGCCACAGCCACCTAAGTGTGTTCTT +
Preference number: 6 (lower is better)
Translates to: FMATGSDGYGTK*CLSPQPPKCVL
Trigger: AAGAACACACTTAGGTGGCTGTGGCGAGAGACAGCACTTTGTACCGTACCCGTCGGACCCGGTGGCCATGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519905.1
CDS GCA 72 bp GAGGGCACAGCTGAGTGCGGCATCCATAAGTTCAGGTaGCTCCTGATGGGCAACTGCCTCTGCCCTTCAATT +
Preference number: 6 (lower is better)
Translates to: EGTAECGIHKFR*LLMGNCLCPSI
Trigger: AATTGAAGGGCAGAGGCAGTTGCCCATCAGGAGGCACCTGAACTTATGGATGCCGCACTCAGCTGTGCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522421.1
CDS CAA 72 bp CTACTGGGAAAAACGGGGATGAGAGTTACTGAGGGCTaGGTGGAGGTGATGGGTGCTTCAGCAGGACGGGCT +
Preference number: 6 (lower is better)
Translates to: LLGKTGMRVTEG*VEVMGASAGRA
Trigger: AGCCCGTCCTGCTGAAGCACCCATCACCTCCACCAAGCCCTCAGTAACTCTCATCCCCGTTTTTCCCAGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460963.5
ENST00000522421.1
CDS CAA 72 bp CACCTTTCTTTTGCTCCCAAGGGTCTCCTTGGTTTCTaGCGCAACCTCTCCCTGACCCCTGGCTTAGGGCAC +
Preference number: 6 (lower is better)
Translates to: HLSFAPKGLLGF*RNLSLTPGLGH
Trigger: GTGCCCTAAGCCAGGGGTCAGGGAGAGGTTGCGCAAGAAACCAAGGAGACCCTTGGGAGCAAAAGAAAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488881.1
CDS CAA 90 bp AAGGAAGAGGCTGGGGCCAAGGCAGAGCCTCAAGGCAGGTTATGCTaGGGTCTCCAGCTATGTGAAGACTGTGTGACTGGCACTAGAGAC +
Preference number: 6 (lower is better)
Translates to: KEEAGAKAEPQGRLC*GLQLCEDCVTGTRD
Trigger: GTCTCTAGTGCCAGTCACACAGTCTTCACATAGCTGGAGACCCAAGCATAACCTGCCTTGAGGCTCTGCCTTGGCCCCAGCCTCTTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488881.1
CDS CCA 72 bp CAGTCTGCACCGCCTCTTTGCGGGCCTTACCGTTCATaGCCACCTGAAACTCCTGATTTGGAAGATTTGGGC +
Preference number: 6 (lower is better)
Translates to: QSAPPLCGPYRS*PPETPDLEDLG
Trigger: GCCCAAATCTTCCAAATCAGGAGTTTCAGGTGGCCATGAACGGTAAGGCCCGCAAAGAGGCGGTGCAGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519698.1
CDS CCA 72 bp AAGGGCCAATTCCCAGATAGTCCTAGTGGGCAGGTCTaGGGTAGGGAACTTGTCTTTTTGAGAACCACCGCC +
Preference number: 6 (lower is better)
Translates to: KGQFPDSPSGQV*GRELVFLRTTA
Trigger: GGCGGTGGTTCTCAAAAAGACAAGTTCCCTACCCCAGACCTGCCCACTAGGACTATCTGGGAATTGGCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000460963.5
ENST00000522421.1
CDS CCA 72 bp GGCCTTACCGTTCATGGCCACCTGAAACTCCTGATTTaGAAGATTTGGGCTGAGGCCCAGGGATCTCCACTT +
Preference number: 6 (lower is better)
Translates to: GLTVHGHLKLLI*KIWAEAQGSPL
Trigger: AAGTGGAGATCCCTGGGCCTCAGCCCAAATCTTCCAAATCAGGAGTTTCAGGTGGCCATGAACGGTAAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519698.1
CDS CAA 90 bp GTACTGCCCAGAGGTCCTATTGCATCTCCTGGGCCATTTGCTTCTTaGCTTTCCTGGAGGAGAGTTTCATCCAGTGTCTTCCTCCATCCC +
Preference number: 6 (lower is better)
Translates to: VLPRGPIASPGPFAS*LSWRRVSSSVFLHP
Trigger: GGGATGGAGGAAGACACTGGATGAAACTCTCCTCCAGGAAAGCAAAGAAGCAAATGGCCCAGGAGATGCAATAGGACCTCTGGGCAGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519905.1
CDS TCA 72 bp CAAGTTGGTCTCGCAGTAGTGAAAAGGAAGTGCCCGTaGACCTCCCGGCAGAATGAAGAAGGGAGAAAGGAA +
Preference number: 6 (lower is better)
Translates to: QVGLAVVKRKCP*TSRQNEEGRKE
Trigger: TTCCTTTCTCCCTTCTTCATTCTGCCGGGAGGTTCACGGGCACTTCCTTTTCACTACTGCGAGACCAACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488881.1
ENST00000490371.5
CDS GCA 72 bp GAGGTCCTATTGCATCTCCTGGGCCATTTGCTTCTTTaGTTTCCTGGAGGAGAGTTTCATCCAGTGTCTTCC +
Preference number: 6 (lower is better)
Translates to: EVLLHLLGHLLL*FPGGEFHPVSS
Trigger: GGAAGACACTGGATGAAACTCTCCTCCAGGAAAGCAAAGAAGCAAATGGCCCAGGAGATGCAATAGGACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519905.1
CDS CAA 72 bp TACTGCCCAGAGGTCCTATTGCATCTCCTGGGCCATTaGCTTCTTTGCTTTCCTGGAGGAGAGTTTCATCCA +
Preference number: 6 (lower is better)
Translates to: YCPEVLLHLLGH*LLCFPGGEFHP
Trigger: TGGATGAAACTCTCCTCCAGGAAAGCAAAGAAGCAAATGGCCCAGGAGATGCAATAGGACCTCTGGGCAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519905.1
CDS GCA 72 bp CCTAAGTGTGTTCTTTGTACTGCCCAGAGGTCCTATTaGATCTCCTGGGCCATTTGCTTCTTTGCTTTCCTG +
Preference number: 6 (lower is better)
Translates to: PKCVLCTAQRSY*ISWAICFFAFL
Trigger: CAGGAAAGCAAAGAAGCAAATGGCCCAGGAGATGCAATAGGACCTCTGGGCAGTACAAAGAACACACTTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519905.1
CDS CAA 72 bp AGAGGTCCTATTGCATCTCCTGGGCCATTTGCTTCTTaGCTTTCCTGGAGGAGAGTTTCATCCAGTGTCTTC +
Preference number: 6 (lower is better)
Translates to: RGPIASPGPFAS*LSWRRVSSSVF
Trigger: GAAGACACTGGATGAAACTCTCCTCCAGGAAAGCAAAGAAGCAAATGGCCCAGGAGATGCAATAGGACCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519905.1