RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DNMBP (Homo sapiens)

Ensembl gene IDs: ENSG00000107554

Ensembl transcript IDs: ENST00000324109.9, ENST00000472036.1, ENST00000543621.6, ENST00000636706.1

Found 738 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCAACGCAGACAGGGCCTGTGTCTCAGGAGCAGGCGCCCTCTCGGTaGGCCGCCAGAACCCTCGGCGGACTGAAAGCAAAGGCAGCAAGG +
Preference number: 1 (lower is better)
Translates to: ATQTGPVSQEQAPSR*AARTLGGLKAKAAR
Trigger: CCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTCTGGCGGCCCACCGAGAGGGCGCCTGCTCCTGAGACACAGGCCCTGTCTGCGTTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR CCA 90 bp ACCCAATCGAGGAGAACAAGATCTGTGGTGTGCTCCACCATGCCATaGTTAAGCAACGCAGACAGGGCCTGTGTCTCAGGAGCAGGCGCC +
Preference number: 1 (lower is better)
Translates to: TQSRRTRSVVCSTMP*LSNADRACVSGAGA
Trigger: GGCGCCTGCTCCTGAGACACAGGCCCTGTCTGCGTTGCTTAACCATGGCATGGTGGAGCACACCACAGATCTTGTTCTCCTCGATTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR GCA 90 bp GCATCAAGGTTTACAACCCAATCGAGGAGAACAAGATCTGTGGTGTaGTCCACCATGCCATGGTTAAGCAACGCAGACAGGGCCTGTGTC +
Preference number: 1 (lower is better)
Translates to: ASRFTTQSRRTRSVV*STMPWLSNADRACV
Trigger: GACACAGGCCCTGTCTGCGTTGCTTAACCATGGCATGGTGGAGCACACCACAGATCTTGTTCTCCTCGATTGGGTTGTAAACCTTGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR CCA 90 bp CTCAACTGGTTTCAGCTCAAAGCAGAACTAATACTTTTAATGGAATaGCTGGAGCTCTCATACTGTTACTCTAGGAAAATCTATCAATTA +
Preference number: 1 (lower is better)
Translates to: LNWFQLKAELILLME*LELSYCYSRKIYQL
Trigger: TAATTGATAGATTTTCCTAGAGTAACAGTATGAGAGCTCCAGCCATTCCATTAAAAGTATTAGTTCTGCTTTGAGCTGAAACCAGTTGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR-3UTR CCA 90 bp AGCATGGAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACCAGGCGCCCTCTCGGTaGGCCGCCAGAACCCTCGGC +
Preference number: 2 (lower is better)
Translates to: SMEHGATPNAVQHNHYQHQAPSR*AARTLG
Trigger: GCCGAGGGTTCTGGCGGCCCACCGAGAGGGCGCCTG...GTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTCCATGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR-3UTR CCA 90 bp GAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACTGTCTACAGGCGCCCTCTCGGTaGGCCGCCAGAACCCTCGGC +
Preference number: 2 (lower is better)
Translates to: EHGATPNAVQHNHYQHCLQAPSR*AARTLG
Trigger: GCCGAGGGTTCTGGCGGCCCACCGAGAGGGCGCCTG...TAGACAGTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR-3UTR CCA 90 bp AGCATGGAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACCAAAGGCAGCAAGGCTaGGTGGCAGGCAACGTGGGC +
Preference number: 2 (lower is better)
Translates to: SMEHGATPNAVQHNHYQHQRQQG*VAGNVG
Trigger: GCCCACGTTGCCTGCCACCCAGCCTTGCTGCCTTTG...GTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTCCATGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR-3UTR GCA 90 bp AGCAGGGAGGCGGGAGGGTTGCTTGAGCCCAGGCGTTTAAGACCAGCCTGGGCAATGTATGAGAATGTGTaGTGGACACTGGAGGTGTCC +
Preference number: 2 (lower is better)
Translates to: SREAGGLLEPRRLRPAWAMYENV*WTLEVS
Trigger: GGACACCTCCAGTGTCCAGCACACATTCTCATACAT...TGCCCAGGCTGGTCTTAAACGCCTGGGCTCAAGCAACCCTCCCGCCTCCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR-3UTR TCA 90 bp GACTCCACGGTGTCTCCCGACTCCCAGGATTTTAAGGCTAAATGTGCACTTGGAGAACCCTCGGCGGACTaGAAGCAAAGGCAGCAAGGC +
Preference number: 2 (lower is better)
Translates to: DSTVSPDSQDFKAKCALGEPSAD*KQRQQG
Trigger: GCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTC...TCCAAGTGCACATTTAGCCTTAAAATCCTGGGAGTCGGGAGACACCGTGGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR-3UTR GCA 90 bp TCCCAGGATTTTAAGGCTAAATGTGCACTTGGAGGAACAGGGGCTGTAAGGCTAGCCATGTGCAAGCACTaGCTCACGGGGTGCCCAGAG +
Preference number: 2 (lower is better)
Translates to: SQDFKAKCALGGTGAVRLAMCKH*LTGCPE
Trigger: CTCTGGGCACCCCGTGAGGCAGTGCTTGCACATGGC...TAGCCTTACAGCCCCTGTTCCTCCAAGTGCACATTTAGCCTTAAAATCCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR-3UTR GCA 90 bp GACTCCACGGTGTCTCCCGACTCCCAGGATTTTAAGGCTAAATGTGCACTTGGAAAACTCCCAGCCATGTaGAAGCACTGCCTCACGGGG +
Preference number: 2 (lower is better)
Translates to: DSTVSPDSQDFKAKCALGKLPAM*KHCLTG
Trigger: CCCCGTGAGGCAGTGCTTGCACATGGCTGGGAGTTT...TCCAAGTGCACATTTAGCCTTAAAATCCTGGGAGTCGGGAGACACCGTGGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR-3UTR GCA 90 bp CACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGACACTGTGGAAACTCCCAGCCATGTaGAAGCACTGCCTCACGGGG +
Preference number: 2 (lower is better)
Translates to: HKRTLALLPSDHDQQTLWKLPAM*KHCLTG
Trigger: CCCCGTGAGGCAGTGCTTGCACATGGCTGGGAGTTT...CCACAGTGTCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR-3UTR CCA 90 bp TCCCAGGATTTTAAGGCTAAATGTGCACTTGGAGGAACAGGGGCTGTAAGGCTACAAAGGCAGCAAGGCTaGGTGGCAGGCAACGTGGGC +
Preference number: 2 (lower is better)
Translates to: SQDFKAKCALGGTGAVRLQRQQG*VAGNVG
Trigger: GCCCACGTTGCCTGCCACCCAGCCTTGCTGCCTTTG...TAGCCTTACAGCCCCTGTTCCTCCAAGTGCACATTTAGCCTTAAAATCCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR-3UTR TCA 90 bp AGCCATGAATTCTTTTCATCTGAGTTGGCATCCGGTCAGCTGAGCATGGAACATGAACCCTCGGCGGACTaGAAGCAAAGGCAGCAAGGC +
Preference number: 2 (lower is better)
Translates to: SHEFFSSELASGQLSMEHEPSAD*KQRQQG
Trigger: GCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTC...ATGTTCCATGCTCAGCTGACCGGATGCCAACTCAGATGAAAAGAATTCATGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR-3UTR CCA 90 bp CACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGACACTGTGGTGCTCCACCATGCCATaGTTAAGCAACGCAGACAGG +
Preference number: 2 (lower is better)
Translates to: HKRTLALLPSDHDQQTLWCSTMP*LSNADR
Trigger: CCTGTCTGCGTTGCTTAACCATGGCATGGTGGAGCA...CCACAGTGTCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR-3UTR TCA 90 bp GACTCCACGGTGTCTCCCGACTCCCAGGATTTTAAGGCTAAATGTGCACTTGGAGTGTCCCAGGAGCTTTaGAGCACTAGGTTTGGTTCA +
Preference number: 2 (lower is better)
Translates to: DSTVSPDSQDFKAKCALGVSQEL*STRFGS
Trigger: TGAACCAAACCTAGTGCTTCAAAGCTCCTGGGACAC...TCCAAGTGCACATTTAGCCTTAAAATCCTGGGAGTCGGGAGACACCGTGGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR-3UTR TCA 90 bp GACTCCACGGTGTCTCCCGACTCCCAGGATTTTAAGGCTAAATGTGCACTTGGATCAGAAAGGTGTCATTaGGGTTGCGGTATGGTGGCT +
Preference number: 2 (lower is better)
Translates to: DSTVSPDSQDFKAKCALGSERCH*GCGMVA
Trigger: AGCCACCATACCGCAACCTCAATGACACCTTTCTGA...TCCAAGTGCACATTTAGCCTTAAAATCCTGGGAGTCGGGAGACACCGTGGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR-3UTR CCA 90 bp AGGTGTCCCAGGAGCTTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCGGAGAACAAGATCTGTaGTGTGCTCCACCATGCCAT +
Preference number: 2 (lower is better)
Translates to: RCPRSFEALGLVQSRQTPGEQDL*CAPPCH
Trigger: ATGGCATGGTGGAGCACACCACAGATCTTGTTCTCC...GGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAAGCTCCTGGGACACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR-3UTR GCA 90 bp GACTCCACGGTGTCTCCCGACTCCCAGGATTTTAAGGCTAAATGTGCACTTGGAATGTATGAGAATGTGTaGTGGACACTGGAGGTGTCC +
Preference number: 2 (lower is better)
Translates to: DSTVSPDSQDFKAKCALGMYENV*WTLEVS
Trigger: GGACACCTCCAGTGTCCAGCACACATTCTCATACAT...TCCAAGTGCACATTTAGCCTTAAAATCCTGGGAGTCGGGAGACACCGTGGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR-3UTR CCA 90 bp GCTTATCCCAATTCAAGTAAGTCACAGGTGTTATGTTGTCTGCATCTATGGATGCAAAGGCAGCAAGGCTaGGTGGCAGGCAACGTGGGC +
Preference number: 2 (lower is better)
Translates to: AYPNSSKSQVLCCLHLWMQRQQG*VAGNVG
Trigger: GCCCACGTTGCCTGCCACCCAGCCTTGCTGCCTTTG...CATCCATAGATGCAGACAACATAACACCTGTGACTTACTTGAATTGGGATAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR-3UTR TCA 90 bp TCAGCTCAAAGCAGAACTAATACTTTTAATGGAATGGCTGGAGCTCTCATACTGGAACCCTCGGCGGACTaGAAGCAAAGGCAGCAAGGC +
Preference number: 2 (lower is better)
Translates to: SAQSRTNTFNGMAGALILEPSAD*KQRQQG
Trigger: GCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTC...CAGTATGAGAGCTCCAGCCATTCCATTAAAAGTATTAGTTCTGCTTTGAGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR-3UTR GCA 90 bp CACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGACACTGTGGCACTGGGCTTCTGACTaGAAGTTTCTCCTTTCCAAA +
Preference number: 2 (lower is better)
Translates to: HKRTLALLPSDHDQQTLWHWASD*KFLLSK
Trigger: TTTGGAAAGGAGAAACTTGCAGTCAGAAGCCCAGTG...CCACAGTGTCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR-3UTR CCA 90 bp TGTGTAAAGACCATCAGAAAGGTGTCATTGAGGTTGCGGTATGGTGGCTTACACTGCTCCACCATGCCATaGTTAAGCAACGCAGACAGG +
Preference number: 2 (lower is better)
Translates to: CVKTIRKVSLRLRYGGLHCSTMP*LSNADR
Trigger: CCTGTCTGCGTTGCTTAACCATGGCATGGTGGAGCA...GTGTAAGCCACCATACCGCAACCTCAATGACACCTTTCTGATGGTCTTTACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR-3UTR CCA 90 bp ACACTCTTCACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGATATGAGAATGTGTGCTaGACACTGGAGGTGTCCCAG +
Preference number: 2 (lower is better)
Translates to: TLFTKGLLHYCLLTTTSRYENVC*TLEVSQ
Trigger: CTGGGACACCTCCAGTGTCCAGCACACATTCTCATA...TCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTGAAGAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR-3UTR GCA 90 bp TTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCAGCCATGTGCAAGCAACAAGATCTGTGGTGTaGTCCACCATGCCATGGTTA +
Preference number: 2 (lower is better)
Translates to: FEALGLVQSRQTPSHVQATRSVV*STMPWL
Trigger: TAACCATGGCATGGTGGAGCACACCACAGATCTTGT...TGCTTGCACATGGCTGGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR-3UTR CCA 90 bp AGCCATGAATTCTTTTCATCTGAGTTGGCATCCGGTCAGCTGAGCATGGAACATGGAGAACAAGATCTGTaGTGTGCTCCACCATGCCAT +
Preference number: 2 (lower is better)
Translates to: SHEFFSSELASGQLSMEHGEQDL*CAPPCH
Trigger: ATGGCATGGTGGAGCACACCACAGATCTTGTTCTCC...ATGTTCCATGCTCAGCTGACCGGATGCCAACTCAGATGAAAAGAATTCATGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR-3UTR CCA 90 bp ACCAGACATCACAGACTGTGTAAAGACCATCAGAAAGGTGTCATTGAGGTTGCGTATGAGAATGTGTGCTaGACACTGGAGGTGTCCCAG +
Preference number: 2 (lower is better)
Translates to: TRHHRLCKDHQKGVIEVAYENVC*TLEVSQ
Trigger: CTGGGACACCTCCAGTGTCCAGCACACATTCTCATA...CGCAACCTCAATGACACCTTTCTGATGGTCTTTACACAGTCTGTGATGTCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR-3UTR GCA 90 bp CTTCCTGCATACATAGGACACTGGGCTTCTGACTGCAAGTTTCTCCTTTCCAAAACAAGATCTGTGGTGTaGTCCACCATGCCATGGTTA +
Preference number: 2 (lower is better)
Translates to: LPAYIGHWASDCKFLLSKTRSVV*STMPWL
Trigger: TAACCATGGCATGGTGGAGCACACCACAGATCTTGT...TTTGGAAAGGAGAAACTTGCAGTCAGAAGCCCAGTGTCCTATGTATGCAGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR-3UTR GCA 90 bp TTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCAGCCATGTGCAAGCACACTGGGCTTCTGACTaGAAGTTTCTCCTTTCCAAA +
Preference number: 2 (lower is better)
Translates to: FEALGLVQSRQTPSHVQAHWASD*KFLLSK
Trigger: TTTGGAAAGGAGAAACTTGCAGTCAGAAGCCCAGTG...TGCTTGCACATGGCTGGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR-3UTR CCA 90 bp GATTTTAAGGCTAAATGTGCACTTGGAGGAACAGGGGCTGTAAGGCTATTTCTTTGCTCCACCATGCCATaGTTAAGCAACGCAGACAGG +
Preference number: 2 (lower is better)
Translates to: DFKAKCALGGTGAVRLFLCSTMP*LSNADR
Trigger: CCTGTCTGCGTTGCTTAACCATGGCATGGTGGAGCA...AAGAAATAGCCTTACAGCCCCTGTTCCTCCAAGTGCACATTTAGCCTTAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR-3UTR CCA 90 bp ACCAGACATCACAGACTGTGTAAAGACCATCAGAAAGGTGTCATTGAGGTTGCGGCATACATAGGACACTaGGCTTCTGACTGCAAGTTT +
Preference number: 2 (lower is better)
Translates to: TRHHRLCKDHQKGVIEVAAYIGH*ASDCKF
Trigger: AAACTTGCAGTCAGAAGCCCAGTGTCCTATGTATGC...CGCAACCTCAATGACACCTTTCTGATGGTCTTTACACAGTCTGTGATGTCTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR-3UTR CCA 90 bp GATTTTAAGGCTAAATGTGCACTTGGAGGAACAGGGGCTGTAAGGCTATTTCTTTATGAGAATGTGTGCTaGACACTGGAGGTGTCCCAG +
Preference number: 2 (lower is better)
Translates to: DFKAKCALGGTGAVRLFLYENVC*TLEVSQ
Trigger: CTGGGACACCTCCAGTGTCCAGCACACATTCTCATA...AAGAAATAGCCTTACAGCCCCTGTTCCTCCAAGTGCACATTTAGCCTTAAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR-3UTR TCA 90 bp TCAGCTCAAAGCAGAACTAATACTTTTAATGGAATGGCTGGAGCTCTCATACTGGTGTCCCAGGAGCTTTaGAGCACTAGGTTTGGTTCA +
Preference number: 2 (lower is better)
Translates to: SAQSRTNTFNGMAGALILVSQEL*STRFGS
Trigger: TGAACCAAACCTAGTGCTTCAAAGCTCCTGGGACAC...CAGTATGAGAGCTCCAGCCATTCCATTAAAAGTATTAGTTCTGCTTTGAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR-3UTR GCA 90 bp GACTCCACGGTGTCTCCCGACTCCCAGGATTTTAAGGCTAAATGTGCACTTGGAAACGCAGTTGAATTTTaGATAACTAATCTGGGAATG +
Preference number: 2 (lower is better)
Translates to: DSTVSPDSQDFKAKCALGNAVEF*ITNLGM
Trigger: CATTCCCAGATTAGTTATGCAAAATTCAACTGCGTT...TCCAAGTGCACATTTAGCCTTAAAATCCTGGGAGTCGGGAGACACCGTGGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR-3UTR CCA 90 bp CATTCCAAGATAGGCTTCATAGCTGGGGAAGATCTTAAGATTCTTGGTCTAAGGGCATACATAGGACACTaGGCTTCTGACTGCAAGTTT +
Preference number: 2 (lower is better)
Translates to: HSKIGFIAGEDLKILGLRAYIGH*ASDCKF
Trigger: AAACTTGCAGTCAGAAGCCCAGTGTCCTATGTATGC...CCTTAGACCAAGAATCTTAAGATCTTCCCCAGCTATGAAGCCTATCTTGGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR CAA 90 bp AAATATAAACATCTCTACATAGAAACACTCTTCACAAAAGGACTCTaGCATTACTGCCTTCTGACCACGACCAGCAGACACTGTGGATGT +
Preference number: 2 (lower is better)
Translates to: KYKHLYIETLFTKGL*HYCLLTTTSRHCGC
Trigger: ACATCCACAGTGTCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTGAAGAGTGTTTCTATGTAGAGATGTTTATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR-3UTR GCA 90 bp TGTGTAAAGACCATCAGAAAGGTGTCATTGAGGTTGCGGTATGGTGGCTTACACAACGCAGTTGAATTTTaGATAACTAATCTGGGAATG +
Preference number: 2 (lower is better)
Translates to: CVKTIRKVSLRLRYGGLHNAVEF*ITNLGM
Trigger: CATTCCCAGATTAGTTATGCAAAATTCAACTGCGTT...GTGTAAGCCACCATACCGCAACCTCAATGACACCTTTCTGATGGTCTTTACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR-3UTR CCA 90 bp GATTTTAAGGCTAAATGTGCACTTGGAGGAACAGGGGCTGTAAGGCTATTTCTTAGGATAAGCTACTTCTaGAATGGCTTATCCCAATTC +
Preference number: 2 (lower is better)
Translates to: DFKAKCALGGTGAVRLFLRISYF*NGLSQF
Trigger: GAATTGGGATAAGCCATTCCAGAAGTAGCTTATCCT...AAGAAATAGCCTTACAGCCCCTGTTCCTCCAAGTGCACATTTAGCCTTAAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR-3UTR CCA 90 bp CATTCCAAGATAGGCTTCATAGCTGGGGAAGATCTTAAGATTCTTGGTCTAAGGAGGATAAGCTACTTCTaGAATGGCTTATCCCAATTC +
Preference number: 2 (lower is better)
Translates to: HSKIGFIAGEDLKILGLRRISYF*NGLSQF
Trigger: GAATTGGGATAAGCCATTCCAGAAGTAGCTTATCCT...CCTTAGACCAAGAATCTTAAGATCTTCCCCAGCTATGAAGCCTATCTTGGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR CCA 72 bp AGGAGAACAAGATCTGTGGTGTGCTCCACCATGCCATaGTTAAGCAACGCAGACAGGGCCTGTGTCTCAGGA +
Preference number: 3 (lower is better)
Translates to: RRTRSVVCSTMP*LSNADRACVSG
Trigger: TCCTGAGACACAGGCCCTGTCTGCGTTGCTTAACCATGGCATGGTGGAGCACACCACAGATCTTGTTCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR-3UTR CAA 90 bp CACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGACACTGTGGTTCTTTTCATCTGAGTaGGCATCCGGTCAGCTGAGC +
Preference number: 3 (lower is better)
Translates to: HKRTLALLPSDHDQQTLWFFSSE*ASGQLS
Trigger: GCTCAGCTGACCGGATGCCAACTCAGATGAAAAGAA...CCACAGTGTCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR GCA 72 bp TTTACAACCCAATCGAGGAGAACAAGATCTGTGGTGTaGTCCACCATGCCATGGTTAAGCAACGCAGACAGG +
Preference number: 3 (lower is better)
Translates to: FTTQSRRTRSVV*STMPWLSNADR
Trigger: CCTGTCTGCGTTGCTTAACCATGGCATGGTGGAGCACACCACAGATCTTGTTCTCCTCGATTGGGTTGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR CCA 72 bp TTAGGGGCAGTATGTATGAGAATGTGTGCTGGACACTaGAGGTGTCCCAGGAGCTTTGAAGCACTAGGTTTG +
Preference number: 3 (lower is better)
Translates to: LGAVCMRMCAGH*RCPRSFEALGL
Trigger: CAAACCTAGTGCTTCAAAGCTCCTGGGACACCTCCAGTGTCCAGCACACATTCTCATACATACTGCCCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR TCA 72 bp CACTCTTCACAAAAGGACTCTTGCATTACTGCCTTCTaGCCACGACCAGCAGACACTGTGGATGTTAGGACT +
Preference number: 3 (lower is better)
Translates to: HSSQKDSCITAF*PRPADTVDVRT
Trigger: AGTCCTAACATCCACAGTGTCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTGAAGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR CCA 72 bp ATTGCTAGAGCACAGCTTCCTGCATACATAGGACACTaGGCTTCTGACTGCAAGTTTCTCCTTTCCAAAAGC +
Preference number: 3 (lower is better)
Translates to: IARAQLPAYIGH*ASDCKFLLSKS
Trigger: GCTTTTGGAAAGGAGAAACTTGCAGTCAGAAGCCCAGTGTCCTATGTATGCAGGAAGCTGTGCTCTAGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR-3UTR CAA 90 bp CATTCCAAGATAGGCTTCATAGCTGGGGAAGATCTTAAGATTCTTGGTCTAAGGTTCTTTTCATCTGAGTaGGCATCCGGTCAGCTGAGC +
Preference number: 3 (lower is better)
Translates to: HSKIGFIAGEDLKILGLRFFSSE*ASGQLS
Trigger: GCTCAGCTGACCGGATGCCAACTCAGATGAAAAGAA...CCTTAGACCAAGAATCTTAAGATCTTCCCCAGCTATGAAGCCTATCTTGGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR GCA 72 bp ATAGAAACACTCTTCACAAAAGGACTCTTGCATTACTaGCTTCTGACCACGACCAGCAGACACTGTGGATGT +
Preference number: 3 (lower is better)
Translates to: IETLFTKGLLHY*LLTTTSRHCGC
Trigger: ACATCCACAGTGTCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTGAAGAGTGTTTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR-3UTR CAA 90 bp TCAGCTCAAAGCAGAACTAATACTTTTAATGGAATGGCTGGAGCTCTCATACTGTTCTTTTCATCTGAGTaGGCATCCGGTCAGCTGAGC +
Preference number: 3 (lower is better)
Translates to: SAQSRTNTFNGMAGALILFFSSE*ASGQLS
Trigger: GCTCAGCTGACCGGATGCCAACTCAGATGAAAAGAA...CAGTATGAGAGCTCCAGCCATTCCATTAAAAGTATTAGTTCTGCTTTGAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
3UTR-3UTR CAA 90 bp CATTCCAAGATAGGCTTCATAGCTGGGGAAGATCTTAAGATTCTTGGTCTAAGGTTTGAAGCACTAGGTTaGGTTCAATCCCGACAAACT +
Preference number: 3 (lower is better)
Translates to: HSKIGFIAGEDLKILGLRFEALG*VQSRQT
Trigger: AGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAA...CCTTAGACCAAGAATCTTAAGATCTTCCCCAGCTATGAAGCCTATCTTGGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp TGGGCCGCCAGAACCCTCGGCGGACTGAAAGCAAAGGCAGCAAGGCTGGGTGGCGTGCTGCCGCTGTTCTaGCGTGGGAACCTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: WAARTLGGLKAKAARLGGVLPLF*RGNLGE
Trigger: CTCCCCCAGGTTCCCACGCCAGAACAGCGGCAGCAC...GCCACCCAGCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTCTGGCGGCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp CTCTCGGTGGGCCGCCAGAACCCTCGGCGGACTGAAAGCAAAGGCAGCAAGGCTCAGCAGCTTCGGCCCTaGAGCCAGCCTGCAGTGGGA +
Preference number: 4 (lower is better)
Translates to: LSVGRQNPRRTESKGSKAQQLRP*SQPAVG
Trigger: TCCCACTGCAGGCTGGCTGCAGGGCCGAAGCTGCTG...AGCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTCTGGCGGCCCACCGAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR GCA 90 bp TGGGCCGCCAGAACCCTCGGCGGACTGAAAGCAAAGGCAGCAAGGCTGGGTGGCTCTCGGGGGCCCTCCTaGGGTGTCCTCGTCCTGATA +
Preference number: 4 (lower is better)
Translates to: WAARTLGGLKAKAARLGGSRGPS*GVLVLI
Trigger: TATCAGGACGAGGACACCGCAGGAGGGCCCCCGAGA...GCCACCCAGCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTCTGGCGGCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR CCA 90 bp CTCTCGGTGGGCCGCCAGAACCCTCGGCGGACTGAAAGCAAAGGCAGCAAGGCTGCCGCTGTTCTGGCGTaGGAACCTGGGGGAGGAGCT +
Preference number: 4 (lower is better)
Translates to: LSVGRQNPRRTESKGSKAAAVLA*EPGGGA
Trigger: AGCTCCTCCCCCAGGTTCCCACGCCAGAACAGCGGC...AGCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTCTGGCGGCCCACCGAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp CTCTCGGTGGGCCGCCAGAACCCTCGGCGGACTGAAAGCAAAGGCAGCAAGGCTGTGCTGCCGCTGTTCTaGCGTGGGAACCTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: LSVGRQNPRRTESKGSKAVLPLF*RGNLGE
Trigger: CTCCCCCAGGTTCCCACGCCAGAACAGCGGCAGCAC...AGCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTCTGGCGGCCCACCGAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp CTCTCGGTGGGCCGCCAGAACCCTCGGCGGACTGAAAGCAAAGGCAGCAAGGCTACCTGGGGGAGGAGCTaGCGTGCTCAGACTCTGTGG +
Preference number: 4 (lower is better)
Translates to: LSVGRQNPRRTESKGSKATWGRS*RAQTLW
Trigger: CCACAGAGTCTGAGCACGGCAGCTCCTCCCCCAGGT...AGCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTCTGGCGGCCCACCGAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp TGGGCCGCCAGAACCCTCGGCGGACTGAAAGCAAAGGCAGCAAGGCTGGGTGGCGACTCTGTGGAGGAGTaGCTACCCACGGAGGCATCG +
Preference number: 4 (lower is better)
Translates to: WAARTLGGLKAKAARLGGDSVEE*LPTEAS
Trigger: CGATGCCTCCGTGGGTAGCCACTCCTCCACAGAGTC...GCCACCCAGCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTCTGGCGGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp TGGGCCGCCAGAACCCTCGGCGGACTGAAAGCAAAGGCAGCAAGGCTGGGTGGCCGTGCTCAGACTCTGTaGAGGAGTGGCTACCCACGG +
Preference number: 4 (lower is better)
Translates to: WAARTLGGLKAKAARLGGRAQTL*RSGYPR
Trigger: CCGTGGGTAGCCACTCCTCCACAGAGTCTGAGCACG...GCCACCCAGCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTCTGGCGGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp AGCAGGGAGGCGGGAGGGTTGCTTGAGCCCAGGCGTTTAAGACCAGCCTGGGCATTGTTCCGGGCCGACTaGAGCTCCTCCAGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: SREAGGLLEPRRLRPAWALFRAD*SSSRVF
Trigger: GAAGACCCTGGAGGAGCTGCAGTCGGCCCGGAACAA...TGCCCAGGCTGGTCTTAAACGCCTGGGCTCAAGCAACCCTCCCGCCTCCCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp CTCTCGGTGGGCCGCCAGAACCCTCGGCGGACTGAAAGCAAAGGCAGCAAGGCTAGGCATCGGAGTGGCTaGGGCGAGGATTGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: LSVGRQNPRRTESKGSKARHRSG*GEDCRA
Trigger: AGCCCTACAATCCTCGCCGCAGCCACTCCGATGCCT...AGCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTCTGGCGGCCCACCGAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp CTCTCGGTGGGCCGCCAGAACCCTCGGCGGACTGAAAGCAAAGGCAGCAAGGCTGACTCTGTGGAGGAGTaGCTACCCACGGAGGCATCG +
Preference number: 4 (lower is better)
Translates to: LSVGRQNPRRTESKGSKADSVEE*LPTEAS
Trigger: CGATGCCTCCGTGGGTAGCCACTCCTCCACAGAGTC...AGCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTCTGGCGGCCCACCGAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp AGCAGGGAGGCGGGAGGGTTGCTTGAGCCCAGGCGTTTAAGACCAGCCTGGGCAACCTTGGCTGGGAGGTaGAGTCTGGGTCTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: SREAGGLLEPRRLRPAWATLAGR*SLGLKG
Trigger: GCCCTTCAGACCCAGACTCCACCTCCCAGCCAAGGT...TGCCCAGGCTGGTCTTAAACGCCTGGGCTCAAGCAACCCTCCCGCCTCCCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp AGCAGGGAGGCGGGAGGGTTGCTTGAGCCCAGGCGTTTAAGACCAGCCTGGGCAGGGTGGCAGGCAACGTaGGCTCAGGTGTACTCGGTT +
Preference number: 4 (lower is better)
Translates to: SREAGGLLEPRRLRPAWAGWQAT*AQVYSV
Trigger: AACCGAGTACACCTGAGCCCACGTTGCCTGCCACCC...TGCCCAGGCTGGTCTTAAACGCCTGGGCTCAAGCAACCCTCCCGCCTCCCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp TGGGCCGCCAGAACCCTCGGCGGACTGAAAGCAAAGGCAGCAAGGCTGGGTGGCGAGCGGCAGTTCTTCTaGTACGCTAGGGCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: WAARTLGGLKAKAARLGGERQFF*YARAEV
Trigger: GACTTCTGCCCTAGCGTATCAGAAGAACTGCCGCTC...GCCACCCAGCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTCTGGCGGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR GCA 90 bp TGGGCCGCCAGAACCCTCGGCGGACTGAAAGCAAAGGCAGCAAGGCTGGGTGGCCCAGAAGGATCCTGCTaGCCCCATGTGCCTTTGTTC +
Preference number: 4 (lower is better)
Translates to: WAARTLGGLKAKAARLGGPEGSC*PHVPLF
Trigger: GAACAAAGGCACATGGGGGCAGCAGGATCCTTCTGG...GCCACCCAGCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTCTGGCGGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS-3UTR CCA 90 bp TGGGCCGCCAGAACCCTCGGCGGACTGAAAGCAAAGGCAGCAAGGCTGGGTGGCTTGGTGAAGAGGCCCTaGGCGTACTGGTGGAACTTG +
Preference number: 4 (lower is better)
Translates to: WAARTLGGLKAKAARLGGLVKRP*AYWWNL
Trigger: CAAGTTCCACCAGTACGCCCAGGGCCTCTTCACCAA...GCCACCCAGCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTCTGGCGGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp CTCTCGGTGGGCCGCCAGAACCCTCGGCGGACTGAAAGCAAAGGCAGCAAGGCTGAGGAGCAAAGCCAGTaGGATGCTTCAGGTGACTGC +
Preference number: 4 (lower is better)
Translates to: LSVGRQNPRRTESKGSKAEEQSQ*DASGDC
Trigger: GCAGTCACCTGAAGCATCTCACTGGCTTTGCTCCTC...AGCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTCTGGCGGCCCACCGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp AGCAGGGAGGCGGGAGGGTTGCTTGAGCCCAGGCGTTTAAGACCAGCCTGGGCACAGCTGGAGTCCCAGTaGCTTTTCTCCTCCACTTCC +
Preference number: 4 (lower is better)
Translates to: SREAGGLLEPRRLRPAWAQLESQ*LFSSTS
Trigger: GGAAGTGGAGGAGAAAAGGCACTGGGACTCCAGCTG...TGCCCAGGCTGGTCTTAAACGCCTGGGCTCAAGCAACCCTCCCGCCTCCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS-3UTR TCA 90 bp CTCTCGGTGGGCCGCCAGAACCCTCGGCGGACTGAAAGCAAAGGCAGCAAGGCTGTCTGTGTCATACTCTaGAGTCAGATGACCGAGGGG +
Preference number: 4 (lower is better)
Translates to: LSVGRQNPRRTESKGSKAVCVIL*SQMTEG
Trigger: CCCCTCGGTCATCTGACTTCAGAGTATGACACAGAC...AGCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTCTGGCGGCCCACCGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR TCA 90 bp CTCTCGGTGGGCCGCCAGAACCCTCGGCGGACTGAAAGCAAAGGCAGCAAGGCTTCAAGCTCATCCCGGTaGCCAAGAAACACAGGTCCT +
Preference number: 4 (lower is better)
Translates to: LSVGRQNPRRTESKGSKASSSSR*PRNTGP
Trigger: AGGACCTGTGTTTCTTGGTCACCGGGATGAGCTTGA...AGCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTCTGGCGGCCCACCGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp CTCTCGGTGGGCCGCCAGAACCCTCGGCGGACTGAAAGCAAAGGCAGCAAGGCTCTATTTCTGGATGCCTaGAGTTCCGGTAGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: LSVGRQNPRRTESKGSKALFLDA*SSGSSS
Trigger: CGAGGAGCTACCGGAACTTCAGGCATCCAGAAATAG...AGCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTCTGGCGGCCCACCGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp CTCTCGGTGGGCCGCCAGAACCCTCGGCGGACTGAAAGCAAAGGCAGCAAGGCTTGCATTACTGCCTTCTaGCCACGACCAGCAGACACT +
Preference number: 4 (lower is better)
Translates to: LSVGRQNPRRTESKGSKACITAF*PRPADT
Trigger: AGTGTCTGCTGGTCGTGGTCAGAAGGCAGTAATGCA...AGCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTCTGGCGGCCCACCGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp AGCAGGGAGGCGGGAGGGTTGCTTGAGCCCAGGCGTTTAAGACCAGCCTGGGCAGGTGTCCTCTCTCCATaGACACATCCCACATGCTCA +
Preference number: 4 (lower is better)
Translates to: SREAGGLLEPRRLRPAWAGVLSP*THPTCS
Trigger: TGAGCATGTGGGATGTGTGCATGGAGAGAGGACACC...TGCCCAGGCTGGTCTTAAACGCCTGGGCTCAAGCAACCCTCCCGCCTCCCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp TGGGCCGCCAGAACCCTCGGCGGACTGAAAGCAAAGGCAGCAAGGCTGGGTGGCTTTTGGCGGAGGAGATaGATCTTGAGGCTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: WAARTLGGLKAKAARLGGFWRRR*ILRLLL
Trigger: CAGAAGCAGCCTCAAGATGCATCTCCTCCGCCAAAA...GCCACCCAGCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTCTGGCGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp TGGGCCGCCAGAACCCTCGGCGGACTGAAAGCAAAGGCAGCAAGGCTGGGTGGCACCAGGTCACCTCGATaGAGGGGAAGATTATCCAAC +
Preference number: 4 (lower is better)
Translates to: WAARTLGGLKAKAARLGGTRSPR*RGRLSN
Trigger: GTTGGATAATCTTCCCCTCCATCGAGGTGACCTGGT...GCCACCCAGCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTCTGGCGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR CCA 90 bp TGGGCCGCCAGAACCCTCGGCGGACTGAAAGCAAAGGCAGCAAGGCTGGGTGGCACCAGTGATGAAGACTaGGAGGAGAGGAGCGTCATT +
Preference number: 4 (lower is better)
Translates to: WAARTLGGLKAKAARLGGTSDED*EERSVI
Trigger: AATGACGCTCCTCTCCTCCCAGTCTTCATCACTGGT...GCCACCCAGCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTCTGGCGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp TGGGCCGCCAGAACCCTCGGCGGACTGAAAGCAAAGGCAGCAAGGCTGGGTGGCTGGCTTCTTGGTAGCTaGAAGAGACTCCGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: WAARTLGGLKAKAARLGGWLLGS*KRLREE
Trigger: TTCTTCCCGGAGTCTCTTCCAGCTACCAAGAAGCCA...GCCACCCAGCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTCTGGCGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp AGCAGGGAGGCGGGAGGGTTGCTTGAGCCCAGGCGTTTAAGACCAGCCTGGGCAGTCCTACAGCATCGCTaGTTTCCAGAGCAGCCAATA +
Preference number: 4 (lower is better)
Translates to: SREAGGLLEPRRLRPAWAVLQHR*FPEQPI
Trigger: TATTGGCTGCTCTGGAAATCAGCGATGCTGTAGGAC...TGCCCAGGCTGGTCTTAAACGCCTGGGCTCAAGCAACCCTCCCGCCTCCCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp AGCAGGGAGGCGGGAGGGTTGCTTGAGCCCAGGCGTTTAAGACCAGCCTGGGCAAGTCTTGAGCAGCATTaGAGTTCCGTTCTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: SREAGGLLEPRRLRPAWASLEQH*SSVLPG
Trigger: TCCAGGCAGAACGGAACTTCAATGCTGCTCAAGACT...TGCCCAGGCTGGTCTTAAACGCCTGGGCTCAAGCAACCCTCCCGCCTCCCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp CTCTCGGTGGGCCGCCAGAACCCTCGGCGGACTGAAAGCAAAGGCAGCAAGGCTCCTTTGACGAGGTCTTaGCTTTGCCCATTTCGTCCT +
Preference number: 4 (lower is better)
Translates to: LSVGRQNPRRTESKGSKAPLTRS*LCPFRP
Trigger: AGGACGAAATGGGCAAAGTCAAGACCTCGTCAAAGG...AGCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTCTGGCGGCCCACCGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp CTCTCGGTGGGCCGCCAGAACCCTCGGCGGACTGAAAGCAAAGGCAGCAAGGCTGTGTCCCAGGAGCTTTaGAGCACTAGGTTTGGTTCA +
Preference number: 4 (lower is better)
Translates to: LSVGRQNPRRTESKGSKAVSQEL*STRFGS
Trigger: TGAACCAAACCTAGTGCTTCAAAGCTCCTGGGACAC...AGCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTCTGGCGGCCCACCGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp TGTGGTGTGCTCCACCATGCCATGGTTAAGCAACGCAGACAGGGCCTGTGTCTCTTGTTCCGGGCCGACTaGAGCTCCTCCAGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: CGVLHHAMVKQRRQGLCLLFRAD*SSSRVF
Trigger: GAAGACCCTGGAGGAGCTGCAGTCGGCCCGGAACAA...GAGACACAGGCCCTGTCTGCGTTGCTTAACCATGGCATGGTGGAGCACACCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp AGCATGGAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACGCCATGTGCAAGCACTaGCTCACGGGGTGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: SMEHGATPNAVQHNHYQHAMCKH*LTGCPE
Trigger: CTCTGGGCACCCCGTGAGGCAGTGCTTGCACATGGC...GTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTCCATGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp AGCAGGGAGGCGGGAGGGTTGCTTGAGCCCAGGCGTTTAAGACCAGCCTGGGCAATCTGGGTGGGATTCTaGGGTGGAATTCAGCAACTC +
Preference number: 4 (lower is better)
Translates to: SREAGGLLEPRRLRPAWAIWVGF*GGIQQL
Trigger: GAGTTGCTGAATTCCACCCCAGAATCCCACCCAGAT...TGCCCAGGCTGGTCTTAAACGCCTGGGCTCAAGCAACCCTCCCGCCTCCCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp AGCAGGGAGGCGGGAGGGTTGCTTGAGCCCAGGCGTTTAAGACCAGCCTGGGCAAATTGCTCCAGAGCCTaGTGCACAAAGTCACAGTGG +
Preference number: 4 (lower is better)
Translates to: SREAGGLLEPRRLRPAWANCSRA*CTKSQW
Trigger: CCACTGTGACTTTGTGCACCAGGCTCTGGAGCAATT...TGCCCAGGCTGGTCTTAAACGCCTGGGCTCAAGCAACCCTCCCGCCTCCCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp CTCTCGGTGGGCCGCCAGAACCCTCGGCGGACTGAAAGCAAAGGCAGCAAGGCTTGCCTCACTGCCATCTaGCTCTGTACTTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: LSVGRQNPRRTESKGSKACLTAI*LCTSVF
Trigger: GAAGACAGAAGTACAGAGCCAGATGGCAGTGAGGCA...AGCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTCTGGCGGCCCACCGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp TCCCAGGATTTTAAGGCTAAATGTGCACTTGGAGGAACAGGGGCTGTAAGGCTACAGGCGCCCTCTCGGTaGGCCGCCAGAACCCTCGGC +
Preference number: 4 (lower is better)
Translates to: SQDFKAKCALGGTGAVRLQAPSR*AARTLG
Trigger: GCCGAGGGTTCTGGCGGCCCACCGAGAGGGCGCCTG...TAGCCTTACAGCCCCTGTTCCTCCAAGTGCACATTTAGCCTTAAAATCCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp ACACTCTTCACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGACAGGCGCCCTCTCGGTaGGCCGCCAGAACCCTCGGC +
Preference number: 4 (lower is better)
Translates to: TLFTKGLLHYCLLTTTSRQAPSR*AARTLG
Trigger: GCCGAGGGTTCTGGCGGCCCACCGAGAGGGCGCCTG...TCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTGAAGAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp TGGGCCGCCAGAACCCTCGGCGGACTGAAAGCAAAGGCAGCAAGGCTGGGTGGCATTTCCAGAACTTACTaGCTCATCCACAGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: WAARTLGGLKAKAARLGGISRTY*LIHSPQ
Trigger: CTGAGGACTGTGGATGAGTCAGTAAGTTCTGGAAAT...GCCACCCAGCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTCTGGCGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR TCA 90 bp CTCTCGGTGGGCCGCCAGAACCCTCGGCGGACTGAAAGCAAAGGCAGCAAGGCTGTCACCTTCCAAAAGTaGGACATCCAAGTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: LSVGRQNPRRTESKGSKAVTFQK*DIQVLS
Trigger: GCTCAAGACTTGGATGTCTCACTTTTGGAAGGTGAC...AGCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTCTGGCGGCCCACCGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp CACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGACACTGTGGCCATGCTGCTGGGGTTaGAGGTCAGGGTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: HKRTLALLPSDHDQQTLWPCCWG*RSGCCR
Trigger: GCGGCAGCACCCTGACCTTCAACCCCAGCAGCATGG...CCACAGTGTCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp CTCTCGGTGGGCCGCCAGAACCCTCGGCGGACTGAAAGCAAAGGCAGCAAGGCTTTCTTGCACATCCTTTaGCGAGGTCTTGACTTTGCC +
Preference number: 4 (lower is better)
Translates to: LSVGRQNPRRTESKGSKAFLHIL*RGLDFA
Trigger: GGCAAAGTCAAGACCTCGTCAAAGGATGTGCAAGAA...AGCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTCTGGCGGCCCACCGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp CACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGACACTGTGGAGGGCGCTCTGGGAGTaGCACTGCCGGCTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: HKRTLALLPSDHDQQTLWRALWE*HCRLCE
Trigger: CTCACAGAGCCGGCAGTGGCACTCCCAGAGCGCCCT...CCACAGTGTCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR GCA 90 bp AGGTGTCCCAGGAGCTTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCCCTCAGGGTGCTGGGTaGTGTGCGGCGGAGGCAACT +
Preference number: 4 (lower is better)
Translates to: RCPRSFEALGLVQSRQTPPQGAG*CAAEAT
Trigger: AGTTGCCTCCGCCGCACAGCACCCAGCACCCTGAGG...GGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAAGCTCCTGGGACACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS-3UTR CCA 90 bp TCCCAGGATTTTAAGGCTAAATGTGCACTTGGAGGAACAGGGGCTGTAAGGCTATGTCACCTCCGCCCCTaGAAGCGGCGGGCGGGTCGA +
Preference number: 4 (lower is better)
Translates to: SQDFKAKCALGGTGAVRLCHLRP*KRRAGR
Trigger: TCGACCCGCCCGCCGCTTCCAGGGGCGGAGGTGACA...TAGCCTTACAGCCCCTGTTCCTCCAAGTGCACATTTAGCCTTAAAATCCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR CCA 90 bp TGGGCCGCCAGAACCCTCGGCGGACTGAAAGCAAAGGCAGCAAGGCTGGGTGGCCATTACTCTCTGTACTaGTTTGATGAGGAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: WAARTLGGLKAKAARLGGHYSLY*FDEEGA
Trigger: GGCTCCTTCCTCATCAAACCAGTACAGAGAGTAATG...GCCACCCAGCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTCTGGCGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp GAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACTGTCTATGGCAGGCCCAGGAGTaGCTTTCGAGCAGACTGGCG +
Preference number: 4 (lower is better)
Translates to: EHGATPNAVQHNHYQHCLWQAQE*LSSRLA
Trigger: CGCCAGTCTGCTCGAAAGCCACTCCTGGGCCTGCCA...TAGACAGTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp CTCTCGGTGGGCCGCCAGAACCCTCGGCGGACTGAAAGCAAAGGCAGCAAGGCTGGTCTGAAGGGCATCTaGAAGGACTACTCTCTGAAT +
Preference number: 4 (lower is better)
Translates to: LSVGRQNPRRTESKGSKAGLKGI*KDYSLN
Trigger: ATTCAGAGAGTAGTCCTTCCAGATGCCCTTCAGACC...AGCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTCTGGCGGCCCACCGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp CACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGACACTGTGGACCTGGGGGAGGAGCTaGCGTGCTCAGACTCTGTGG +
Preference number: 4 (lower is better)
Translates to: HKRTLALLPSDHDQQTLWTWGRS*RAQTLW
Trigger: CCACAGAGTCTGAGCACGGCAGCTCCTCCCCCAGGT...CCACAGTGTCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp AGGTGTCCCAGGAGCTTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCACCTGGGGGAGGAGCTaGCGTGCTCAGACTCTGTGG +
Preference number: 4 (lower is better)
Translates to: RCPRSFEALGLVQSRQTPTWGRS*RAQTLW
Trigger: CCACAGAGTCTGAGCACGGCAGCTCCTCCCCCAGGT...GGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAAGCTCCTGGGACACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp TGGGCCGCCAGAACCCTCGGCGGACTGAAAGCAAAGGCAGCAAGGCTGGGTGGCAGGTGTACTCGGTTTTaGGGATATAATTGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: WAARTLGGLKAKAARLGGRCTRF*GYNWRE
Trigger: TTCCCTCCAATTATATCCGCAAAACCGAGTACACCT...GCCACCCAGCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTCTGGCGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp AGCAGGGAGGCGGGAGGGTTGCTTGAGCCCAGGCGTTTAAGACCAGCCTGGGCACACTGGGCTTCTGACTaGAAGTTTCTCCTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: SREAGGLLEPRRLRPAWAHWASD*KFLLSK
Trigger: TTTGGAAAGGAGAAACTTGCAGTCAGAAGCCCAGTG...TGCCCAGGCTGGTCTTAAACGCCTGGGCTCAAGCAACCCTCCCGCCTCCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp AGGTGTCCCAGGAGCTTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCGGGTGCTGGGTGCTGTaGGGCGGAGGCAACTATTCC +
Preference number: 4 (lower is better)
Translates to: RCPRSFEALGLVQSRQTPGCWVL*GGGNYS
Trigger: GGAATAGTTGCCTCCGCCGCACAGCACCCAGCACCC...GGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAAGCTCCTGGGACACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS-3UTR CCA 90 bp CTCTCGGTGGGCCGCCAGAACCCTCGGCGGACTGAAAGCAAAGGCAGCAAGGCTGGTTTTCCTCTCAAATaGCTTCTTGGTAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LSVGRQNPRRTESKGSKAGFPLK*LLGSWK
Trigger: CTTCCAGCTACCAAGAAGCCATTTGAGAGGAAAACC...AGCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTCTGGCGGCCCACCGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp CACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGACACTGTGGTTTCAGGGGGATACCTaGCCAGGAGGGAGGCCCGGA +
Preference number: 4 (lower is better)
Translates to: HKRTLALLPSDHDQQTLWFQGDT*PGGRPG
Trigger: TCCGGGCCTCCCTCCTGGCCAGGTATCCCCCTGAAA...CCACAGTGTCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp AGGTGTCCCAGGAGCTTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCTTTCAGGGGGATACCTaGCCAGGAGGGAGGCCCGGA +
Preference number: 4 (lower is better)
Translates to: RCPRSFEALGLVQSRQTPFQGDT*PGGRPG
Trigger: TCCGGGCCTCCCTCCTGGCCAGGTATCCCCCTGAAA...GGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAAGCTCCTGGGACACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp GAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACTGTCTACGTGCTCAGACTCTGTaGAGGAGTGGCTACCCACGG +
Preference number: 4 (lower is better)
Translates to: EHGATPNAVQHNHYQHCLRAQTL*RSGYPR
Trigger: CCGTGGGTAGCCACTCCTCCACAGAGTCTGAGCACG...TAGACAGTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp AGCAGGGAGGCGGGAGGGTTGCTTGAGCCCAGGCGTTTAAGACCAGCCTGGGCATTGGTCACATTCTTTTaGCGGAGGAGATGCATCTTG +
Preference number: 4 (lower is better)
Translates to: SREAGGLLEPRRLRPAWALVTFF*RRRCIL
Trigger: CAAGATGCATCTCCTCCGCCAAAAGAATGTGACCAA...TGCCCAGGCTGGTCTTAAACGCCTGGGCTCAAGCAACCCTCCCGCCTCCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp AGCAGGGAGGCGGGAGGGTTGCTTGAGCCCAGGCGTTTAAGACCAGCCTGGGCAGCATACATAGGACACTaGGCTTCTGACTGCAAGTTT +
Preference number: 4 (lower is better)
Translates to: SREAGGLLEPRRLRPAWAAYIGH*ASDCKF
Trigger: AAACTTGCAGTCAGAAGCCCAGTGTCCTATGTATGC...TGCCCAGGCTGGTCTTAAACGCCTGGGCTCAAGCAACCCTCCCGCCTCCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp AGCAGGGAGGCGGGAGGGTTGCTTGAGCCCAGGCGTTTAAGACCAGCCTGGGCAAACATGCTCAGTAACTaGTTTAAGGGGGAGATGACA +
Preference number: 4 (lower is better)
Translates to: SREAGGLLEPRRLRPAWANMLSN*FKGEMT
Trigger: TGTCATCTCCCCCTTAAATCAGTTACTGAGCATGTT...TGCCCAGGCTGGTCTTAAACGCCTGGGCTCAAGCAACCCTCCCGCCTCCCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp GAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACTGTCTAGGTGGAGTCTGGGTCTaGAGGGCATCTGGAAGGACT +
Preference number: 4 (lower is better)
Translates to: EHGATPNAVQHNHYQHCLGGVWV*RASGRT
Trigger: AGTCCTTCCAGATGCCCTTCAGACCCAGACTCCACC...TAGACAGTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp GACTCCACGGTGTCTCCCGACTCCCAGGATTTTAAGGCTAAATGTGCACTTGGAATCTGCAGAGTCCCCTaGCCTTGGCTGGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: DSTVSPDSQDFKAKCALGICRVP*PWLGGG
Trigger: TCCACCTCCCAGCCAAGGTCAGGGGACTCTGCAGAT...TCCAAGTGCACATTTAGCCTTAAAATCCTGGGAGTCGGGAGACACCGTGGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp AGCATGGAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACCCATGTTTTATAACCTaGTTTCCGCCGCCCGGCGGT +
Preference number: 4 (lower is better)
Translates to: SMEHGATPNAVQHNHYQHPCFIT*FPPPGG
Trigger: ACCGCCGGGCGGCGGAAAGCAGGTTATAAAACATGG...GTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTCCATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR GCA 90 bp AGCCATGAATTCTTTTCATCTGAGTTGGCATCCGGTCAGCTGAGCATGGAACATTGGGAAGAAGCCCCGTaGGCCCCAGCAGCTTCGGCC +
Preference number: 4 (lower is better)
Translates to: SHEFFSSELASGQLSMEHWEEAP*APAASA
Trigger: GGCCGAAGCTGCTGGGGCGCACGGGGCTTCTTCCCA...ATGTTCCATGCTCAGCTGACCGGATGCCAACTCAGATGAAAAGAATTCATGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR GCA 90 bp AGCATGGAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACAGTCCAGGTCAGTGCTaGCGTCTCCCTGTGAATGTG +
Preference number: 4 (lower is better)
Translates to: SMEHGATPNAVQHNHYQHSPGQC*RLPVNV
Trigger: CACATTCACAGGGAGACGGCAGCACTGACCTGGACT...GTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTCCATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR GCA 90 bp AGGTGTCCCAGGAGCTTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCTTGTTCCGGGCCGACTaGAGCTCCTCCAGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: RCPRSFEALGLVQSRQTPLFRAD*SSSRVF
Trigger: GAAGACCCTGGAGGAGCTGCAGTCGGCCCGGAACAA...GGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAAGCTCCTGGGACACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp TGTGGTGTGCTCCACCATGCCATGGTTAAGCAACGCAGACAGGGCCTGTGTCTCGGACTCTTGCATTACTaGCTTCTGACCACGACCAGC +
Preference number: 4 (lower is better)
Translates to: CGVLHHAMVKQRRQGLCLGLLHY*LLTTTS
Trigger: GCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCC...GAGACACAGGCCCTGTCTGCGTTGCTTAACCATGGCATGGTGGAGCACACCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp AGCATGGAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACCGTACTGGTGGAACTTaGGCAGCTCATCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: SMEHGATPNAVQHNHYQHRTGGT*AAHPAA
Trigger: AGCTGCTGGATGAGCTGCCCAAGTTCCACCAGTACG...GTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTCCATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp AGGTGTCCCAGGAGCTTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCAGGCCCTGGGCGTACTaGTGGAACTTGGGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: RCPRSFEALGLVQSRQTPRPWAY*WNLGSS
Trigger: TGAGCTGCCCAAGTTCCACCAGTACGCCCAGGGCCT...GGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAAGCTCCTGGGACACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp CAAGGTTTACAACCCAATCGAGGAGAACAAGATCTGTGGTGTGCTCCACCATGCTGGCAGGCCCAGGAGTaGCTTTCGAGCAGACTGGCG +
Preference number: 4 (lower is better)
Translates to: QGLQPNRGEQDLWCAPPCWQAQE*LSSRLA
Trigger: CGCCAGTCTGCTCGAAAGCCACTCCTGGGCCTGCCA...GCATGGTGGAGCACACCACAGATCTTGTTCTCCTCGATTGGGTTGTAAACCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp CTCATAGTCACTAAGTCATTTGCAAAGCCCCAGGGTCCATTTCAAATTCTAGAGCAGGCGCCCTCTCGGTaGGCCGCCAGAACCCTCGGC +
Preference number: 4 (lower is better)
Translates to: LIVTKSFAKPQGPFQILEQAPSR*AARTLG
Trigger: GCCGAGGGTTCTGGCGGCCCACCGAGAGGGCGCCTG...CTCTAGAATTTGAAATGGACCCTGGGGCTTTGCAAATGACTTAGTGACTATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp TGTGGTGTGCTCCACCATGCCATGGTTAAGCAACGCAGACAGGGCCTGTGTCTCTGCTCCACCATGCCATaGTTAAGCAACGCAGACAGG +
Preference number: 4 (lower is better)
Translates to: CGVLHHAMVKQRRQGLCLCSTMP*LSNADR
Trigger: CCTGTCTGCGTTGCTTAACCATGGCATGGTGGAGCA...GAGACACAGGCCCTGTCTGCGTTGCTTAACCATGGCATGGTGGAGCACACCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp TGTGGTGTGCTCCACCATGCCATGGTTAAGCAACGCAGACAGGGCCTGTGTCTCTACTATTCTTTTCCATaGGCCTGGGCTGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: CGVLHHAMVKQRRQGLCLYYSFP*AWAGLW
Trigger: CCACAGCCCAGCCCAGGCCCATGGAAAAGAATAGTA...GAGACACAGGCCCTGTCTGCGTTGCTTAACCATGGCATGGTGGAGCACACCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS-3UTR TCA 90 bp AGGTGTCCCAGGAGCTTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCGGTGGAGTCTGGGTCTaGAGGGCATCTGGAAGGACT +
Preference number: 4 (lower is better)
Translates to: RCPRSFEALGLVQSRQTPGGVWV*RASGRT
Trigger: AGTCCTTCCAGATGCCCTTCAGACCCAGACTCCACC...GGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAAGCTCCTGGGACACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp AGCATGGAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACTGGGCTTCTCGTAGGTaGATTATCCTTCGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: SMEHGATPNAVQHNHYQHWASRR*IILRPR
Trigger: CCTGGGACGAAGGATAATTCACCTACGAGAAGCCCA...GTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTCCATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS-3UTR GCA 90 bp AGCATGGAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACGAAAGATGCCTGTCCTaGCCTTCAGGGATCCTTCCA +
Preference number: 4 (lower is better)
Translates to: SMEHGATPNAVQHNHYQHERCLS*PSGILP
Trigger: TGGAAGGATCCCTGAAGGGCAGGACAGGCATCTTTC...GTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTCCATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR GCA 90 bp GACTCCACGGTGTCTCCCGACTCCCAGGATTTTAAGGCTAAATGTGCACTTGGAACCGCATTCGTTCTCTaGTGTGCTGAGGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: DSTVSPDSQDFKAKCALGTAFVL*CAEGGR
Trigger: CCTGCCTCCCTCAGCACAGCAGAGAACGAATGCGGT...TCCAAGTGCACATTTAGCCTTAAAATCCTGGGAGTCGGGAGACACCGTGGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR GCA 90 bp GACTCCACGGTGTCTCCCGACTCCCAGGATTTTAAGGCTAAATGTGCACTTGGAGGTACCTGTGCCTGCTaGATGGGTACCATGATCCGC +
Preference number: 4 (lower is better)
Translates to: DSTVSPDSQDFKAKCALGGTCAC*MGTMIR
Trigger: GCGGATCATGGTACCCATGCAGCAGGCACAGGTACC...TCCAAGTGCACATTTAGCCTTAAAATCCTGGGAGTCGGGAGACACCGTGGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp AGCATGGAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACGGTGTCCTCTCTCCATaGACACATCCCACATGCTCA +
Preference number: 4 (lower is better)
Translates to: SMEHGATPNAVQHNHYQHGVLSP*THPTCS
Trigger: TGAGCATGTGGGATGTGTGCATGGAGAGAGGACACC...GTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTCCATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp TGTGGTGTGCTCCACCATGCCATGGTTAAGCAACGCAGACAGGGCCTGTGTCTCTTTTGGCGGAGGAGATaGATCTTGAGGCTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: CGVLHHAMVKQRRQGLCLFWRRR*ILRLLL
Trigger: CAGAAGCAGCCTCAAGATGCATCTCCTCCGCCAAAA...GAGACACAGGCCCTGTCTGCGTTGCTTAACCATGGCATGGTGGAGCACACCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp GACTCCACGGTGTCTCCCGACTCCCAGGATTTTAAGGCTAAATGTGCACTTGGAGACCTGGTTGCCTTCTaGCTCACTGCCATCTGGCTC +
Preference number: 4 (lower is better)
Translates to: DSTVSPDSQDFKAKCALGDLVAF*LTAIWL
Trigger: GAGCCAGATGGCAGTGAGGCAGAAGGCAACCAGGTC...TCCAAGTGCACATTTAGCCTTAAAATCCTGGGAGTCGGGAGACACCGTGGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp TTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCAGCCATGTGCAAGCAGCCATGTGCAAGCACTaGCTCACGGGGTGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: FEALGLVQSRQTPSHVQAAMCKH*LTGCPE
Trigger: CTCTGGGCACCCCGTGAGGCAGTGCTTGCACATGGC...TGCTTGCACATGGCTGGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp TGGGCCGCCAGAACCCTCGGCGGACTGAAAGCAAAGGCAGCAAGGCTGGGTGGCCTTTTAGACTGGGAATaGTCACAATTTCCACAAAAC +
Preference number: 4 (lower is better)
Translates to: WAARTLGGLKAKAARLGGLLDWE*SQFPQN
Trigger: GTTTTGTGGAAATTGTGACCATTCCCAGTCTAAAAG...GCCACCCAGCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTCTGGCGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR CCA 90 bp GAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACTGTCTATCCATAACAAGCCCTTaGGCTTGCGGACCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: EHGATPNAVQHNHYQHCLSITSP*ACGPGF
Trigger: GAAGCCTGGTCCGCAAGCCCAAGGGCTTGTTATGGA...TAGACAGTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR CCA 90 bp GATTTTAAGGCTAAATGTGCACTTGGAGGAACAGGGGCTGTAAGGCTATTTCTTGGGAGGCAGGGGAGCTaGGCGAGAGGGTCGCACCAC +
Preference number: 4 (lower is better)
Translates to: DFKAKCALGGTGAVRLFLGRQGS*ARGSHH
Trigger: GTGGTGCGACCCTCTCGCCCAGCTCCCCTGCCTCCC...AAGAAATAGCCTTACAGCCCCTGTTCCTCCAAGTGCACATTTAGCCTTAAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR CCA 90 bp TGTGGTGTGCTCCACCATGCCATGGTTAAGCAACGCAGACAGGGCCTGTGTCTCATCTGGGTGGGATTCTaGGGTGGAATTCAGCAACTC +
Preference number: 4 (lower is better)
Translates to: CGVLHHAMVKQRRQGLCLIWVGF*GGIQQL
Trigger: GAGTTGCTGAATTCCACCCCAGAATCCCACCCAGAT...GAGACACAGGCCCTGTCTGCGTTGCTTAACCATGGCATGGTGGAGCACACCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp GAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACTGTCTACGTACTGGTGGAACTTaGGCAGCTCATCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: EHGATPNAVQHNHYQHCLRTGGT*AAHPAA
Trigger: AGCTGCTGGATGAGCTGCCCAAGTTCCACCAGTACG...TAGACAGTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp ACCAGACATCACAGACTGTGTAAAGACCATCAGAAAGGTGTCATTGAGGTTGCGGCCGCTGTTCTGGCGTaGGAACCTGGGGGAGGAGCT +
Preference number: 4 (lower is better)
Translates to: TRHHRLCKDHQKGVIEVAAAVLA*EPGGGA
Trigger: AGCTCCTCCCCCAGGTTCCCACGCCAGAACAGCGGC...CGCAACCTCAATGACACCTTTCTGATGGTCTTTACACAGTCTGTGATGTCTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp CTTCCTGCATACATAGGACACTGGGCTTCTGACTGCAAGTTTCTCCTTTCCAAAGCCGCTGTTCTGGCGTaGGAACCTGGGGGAGGAGCT +
Preference number: 4 (lower is better)
Translates to: LPAYIGHWASDCKFLLSKAAVLA*EPGGGA
Trigger: AGCTCCTCCCCCAGGTTCCCACGCCAGAACAGCGGC...TTTGGAAAGGAGAAACTTGCAGTCAGAAGCCCAGTGTCCTATGTATGCAGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp CAAGGTTTACAACCCAATCGAGGAGAACAAGATCTGTGGTGTGCTCCACCATGCTCCCCTGACCTTGGCTaGGAGGTGGAGTCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: QGLQPNRGEQDLWCAPPCSPDLG*EVESGS
Trigger: AGACCCAGACTCCACCTCCCAGCCAAGGTCAGGGGA...GCATGGTGGAGCACACCACAGATCTTGTTCTCCTCGATTGGGTTGTAAACCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp CATTCCAAGATAGGCTTCATAGCTGGGGAAGATCTTAAGATTCTTGGTCTAAGGAGCGCCTCAGGGTGCTaGGTGCTGTGCGGCGGAGGC +
Preference number: 4 (lower is better)
Translates to: HSKIGFIAGEDLKILGLRSASGC*VLCGGG
Trigger: GCCTCCGCCGCACAGCACCCAGCACCCTGAGGCGCT...CCTTAGACCAAGAATCTTAAGATCTTCCCCAGCTATGAAGCCTATCTTGGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS-3UTR TCA 90 bp AGCATGGAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACTCTGCCAAGGAGTCCTaGAGATGCTTCTGGATCTTC +
Preference number: 4 (lower is better)
Translates to: SMEHGATPNAVQHNHYQHSAKES*RCFWIF
Trigger: GAAGATCCAGAAGCATCTTCAGGACTCCTTGGCAGA...GTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTCCATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp CACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGACACTGTGGGAGGAGCAAAGCCAGTaGGATGCTTCAGGTGACTGC +
Preference number: 4 (lower is better)
Translates to: HKRTLALLPSDHDQQTLWEEQSQ*DASGDC
Trigger: GCAGTCACCTGAAGCATCTCACTGGCTTTGCTCCTC...CCACAGTGTCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp TGTGGTGTGCTCCACCATGCCATGGTTAAGCAACGCAGACAGGGCCTGTGTCTCGAGACATCCAAGTCTTaGGCAGCATTGAAGTTCCGT +
Preference number: 4 (lower is better)
Translates to: CGVLHHAMVKQRRQGLCLETSKS*AALKFR
Trigger: ACGGAACTTCAATGCTGCTCAAGACTTGGATGTCTC...GAGACACAGGCCCTGTCTGCGTTGCTTAACCATGGCATGGTGGAGCACACCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp ACACTCTTCACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGAATCTGCAGAGTCCCCTaGCCTTGGCTGGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: TLFTKGLLHYCLLTTTSRICRVP*PWLGGG
Trigger: TCCACCTCCCAGCCAAGGTCAGGGGACTCTGCAGAT...TCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTGAAGAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp AGCATGGAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACGAGTTTCTGATTGGCTaGCACGCTCAGCTCATTTGG +
Preference number: 4 (lower is better)
Translates to: SMEHGATPNAVQHNHYQHEFLIG*HAQLIW
Trigger: CCAAATGAGCTGAGCGTGTCAGCCAATCAGAAACTC...GTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTCCATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp GACTCCACGGTGTCTCCCGACTCCCAGGATTTTAAGGCTAAATGTGCACTTGGATCTCCCCTGGTACACTaGGTCTGCAGACCATCCAGA +
Preference number: 4 (lower is better)
Translates to: DSTVSPDSQDFKAKCALGSPLVH*VCRPSR
Trigger: TCTGGATGGTCTGCAGACTCAGTGTACCAGGGGAGA...TCCAAGTGCACATTTAGCCTTAAAATCCTGGGAGTCGGGAGACACCGTGGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS-3UTR GCA 90 bp ACCAGACATCACAGACTGTGTAAAGACCATCAGAAAGGTGTCATTGAGGTTGCGCTCTGGGAGTGCCACTaGCGGCTCTGTGAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: TRHHRLCKDHQKGVIEVALWECH*RLCEER
Trigger: CCTCTCCTCACAGAGCCGGCAGTGGCACTCCCAGAG...CGCAACCTCAATGACACCTTTCTGATGGTCTTTACACAGTCTGTGATGTCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR GCA 90 bp GACTCCACGGTGTCTCCCGACTCCCAGGATTTTAAGGCTAAATGTGCACTTGGAACCGGTAAGGAAAGATaGCTGTCCTGCCCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: DSTVSPDSQDFKAKCALGTGKER*LSCPSG
Trigger: CCCTGAAGGGCAGGACAGGCATCTTTCCTTACCGGT...TCCAAGTGCACATTTAGCCTTAAAATCCTGGGAGTCGGGAGACACCGTGGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR GCA 90 bp CAAGGTTTACAACCCAATCGAGGAGAACAAGATCTGTGGTGTGCTCCACCATGCCTCTGTGCCGGGCCCTaGCAAGCTCTTCTCAAACTC +
Preference number: 4 (lower is better)
Translates to: QGLQPNRGEQDLWCAPPCLCAGP*QALLKL
Trigger: GAGTTTGAGAAGAGCTTGGCAGGGCCCGGCACAGAG...GCATGGTGGAGCACACCACAGATCTTGTTCTCCTCGATTGGGTTGTAAACCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR GCA 90 bp AGGTGTCCCAGGAGCTTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCTTTTATCTGGCTCTGTaGCGGGCCCTGCCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: RCPRSFEALGLVQSRQTPFYLAL*RALPSS
Trigger: AGAGCTTGGCAGGGCCCGGCACAGAGCCAGATAAAA...GGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAAGCTCCTGGGACACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR GCA 90 bp AGCATGGAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACGTTGCTGCAGAACTCTaGTGTGCTCTTCGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: SMEHGATPNAVQHNHYQHVAAEL*CALRGR
Trigger: TCTTCCACGAAGAGCACAGCAGAGTTCTGCAGCAAC...GTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTCCATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp CTTCCTGCATACATAGGACACTGGGCTTCTGACTGCAAGTTTCTCCTTTCCAAAGGGGAGGAGCTGCCGTaGTCAGACTCTGTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: LPAYIGHWASDCKFLLSKGEELP*SDSVEE
Trigger: CTCCTCCACAGAGTCTGAGCACGGCAGCTCCTCCCC...TTTGGAAAGGAGAAACTTGCAGTCAGAAGCCCAGTGTCCTATGTATGCAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp CAAGGTTTACAACCCAATCGAGGAGAACAAGATCTGTGGTGTGCTCCACCATGCGACCTGGTTGCCTTCTaGCTCACTGCCATCTGGCTC +
Preference number: 4 (lower is better)
Translates to: QGLQPNRGEQDLWCAPPCDLVAF*LTAIWL
Trigger: GAGCCAGATGGCAGTGAGGCAGAAGGCAACCAGGTC...GCATGGTGGAGCACACCACAGATCTTGTTCTCCTCGATTGGGTTGTAAACCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp AGGTGTCCCAGGAGCTTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCGCGTCATTTCTGCAGTaGCCAGAGCTGGCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: RCPRSFEALGLVQSRQTPASFLQ*PELAVC
Trigger: ACACACAGCCAGCTCTGGGCACTGCAGAAATGACGC...GGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAAGCTCCTGGGACACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543621.6
CDS-3UTR CCA 90 bp AGCATGGAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACATCTGGGTGGGATTCTaGGGTGGAATTCAGCAACTC +
Preference number: 4 (lower is better)
Translates to: SMEHGATPNAVQHNHYQHIWVGF*GGIQQL
Trigger: GAGTTGCTGAATTCCACCCCAGAATCCCACCCAGAT...GTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTCCATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp AGCATGGAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACGGCACTTTATCTGGGTaGGATTCTGGGGTGGAATTC +
Preference number: 4 (lower is better)
Translates to: SMEHGATPNAVQHNHYQHGTLSG*DSGVEF
Trigger: GAATTCCACCCCAGAATCCCACCCAGATAAAGTGCC...GTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTCCATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp AGCATGGAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACTGGCTTCTTGGTAGCTaGAAGAGACTCCGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: SMEHGATPNAVQHNHYQHWLLGS*KRLREE
Trigger: TTCTTCCCGGAGTCTCTTCCAGCTACCAAGAAGCCA...GTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTCCATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp AGTGAGCATCAAGGTTTACAACCCAATCGAGGAGAACAAGATCTGTGGTGTGCTTTTCAGGGGGATACCTaGCCAGGAGGGAGGCCCGGA +
Preference number: 4 (lower is better)
Translates to: SEHQGLQPNRGEQDLWCAFQGDT*PGGRPG
Trigger: TCCGGGCCTCCCTCCTGGCCAGGTATCCCCCTGAAA...AGCACACCACAGATCTTGTTCTCCTCGATTGGGTTGTAAACCTTGATGCTCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp TCCCAGGATTTTAAGGCTAAATGTGCACTTGGAGGAACAGGGGCTGTAAGGCTACGTGCTCAGACTCTGTaGAGGAGTGGCTACCCACGG +
Preference number: 4 (lower is better)
Translates to: SQDFKAKCALGGTGAVRLRAQTL*RSGYPR
Trigger: CCGTGGGTAGCCACTCCTCCACAGAGTCTGAGCACG...TAGCCTTACAGCCCCTGTTCCTCCAAGTGCACATTTAGCCTTAAAATCCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp TCCCAGGATTTTAAGGCTAAATGTGCACTTGGAGGAACAGGGGCTGTAAGGCTATCCCCTGACCTTGGCTaGGAGGTGGAGTCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: SQDFKAKCALGGTGAVRLSPDLG*EVESGS
Trigger: AGACCCAGACTCCACCTCCCAGCCAAGGTCAGGGGA...TAGCCTTACAGCCCCTGTTCCTCCAAGTGCACATTTAGCCTTAAAATCCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp CACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGACACTGTGGGGTAGCTCCTCGGCGTaGCAGTGGGTTGCTTTACAT +
Preference number: 4 (lower is better)
Translates to: HKRTLALLPSDHDQQTLWGSSSA*QWVALH
Trigger: ATGTAAAGCAACCCACTGCCACGCCGAGGAGCTACC...CCACAGTGTCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp AGGTGTCCCAGGAGCTTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCCTGTCTTCCGGAGCCTaGGCTGTTCTTGCACATCCT +
Preference number: 4 (lower is better)
Translates to: RCPRSFEALGLVQSRQTPLSSGA*AVLAHP
Trigger: AGGATGTGCAAGAACAGCCCAGGCTCCGGAAGACAG...GGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAAGCTCCTGGGACACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp CACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGACACTGTGGCTGTCTTCCGGAGCCTaGGCTGTTCTTGCACATCCT +
Preference number: 4 (lower is better)
Translates to: HKRTLALLPSDHDQQTLWLSSGA*AVLAHP
Trigger: AGGATGTGCAAGAACAGCCCAGGCTCCGGAAGACAG...CCACAGTGTCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp TTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCAGCCATGTGCAAGCAGGGTGGCAGGCAACGTaGGCTCAGGTGTACTCGGTT +
Preference number: 4 (lower is better)
Translates to: FEALGLVQSRQTPSHVQAGWQAT*AQVYSV
Trigger: AACCGAGTACACCTGAGCCCACGTTGCCTGCCACCC...TGCTTGCACATGGCTGGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp CTTCCTGCATACATAGGACACTGGGCTTCTGACTGCAAGTTTCTCCTTTCCAAACAAAGGCAGCAAGGCTaGGTGGCAGGCAACGTGGGC +
Preference number: 4 (lower is better)
Translates to: LPAYIGHWASDCKFLLSKQRQQG*VAGNVG
Trigger: GCCCACGTTGCCTGCCACCCAGCCTTGCTGCCTTTG...TTTGGAAAGGAGAAACTTGCAGTCAGAAGCCCAGTGTCCTATGTATGCAGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp AGCCATGAATTCTTTTCATCTGAGTTGGCATCCGGTCAGCTGAGCATGGAACATCAAAGGCAGCAAGGCTaGGTGGCAGGCAACGTGGGC +
Preference number: 4 (lower is better)
Translates to: SHEFFSSELASGQLSMEHQRQQG*VAGNVG
Trigger: GCCCACGTTGCCTGCCACCCAGCCTTGCTGCCTTTG...ATGTTCCATGCTCAGCTGACCGGATGCCAACTCAGATGAAAAGAATTCATGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp AGCATGGAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACCTTCATACTCCCAGCTaGAGTCCCAGTGCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: SMEHGATPNAVQHNHYQHLHTPS*SPSAFS
Trigger: AGAAAAGGCACTGGGACTCCAGCTGGGAGTATGAAG...GTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTCCATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS-3UTR CCA 90 bp CTCTCGGTGGGCCGCCAGAACCCTCGGCGGACTGAAAGCAAAGGCAGCAAGGCTACAGTCCATATAGCTTaGTTCACTCTGTTCAAAATC +
Preference number: 4 (lower is better)
Translates to: LSVGRQNPRRTESKGSKATVHIA*FTLFKI
Trigger: GATTTTGAACAGAGTGAACCAAGCTATATGGACTGT...AGCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTCTGGCGGCCCACCGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636706.1
3UTR CAA 72 bp CACTGGAGGTGTCCCAGGAGCTTTGAAGCACTAGGTTaGGTTCAATCCCGACAAACTCCCAGCCATGTGCAA +
Preference number: 4 (lower is better)
Translates to: HWRCPRSFEALG*VQSRQTPSHVQ
Trigger: TTGCACATGGCTGGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAAGCTCCTGGGACACCTCCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp AGGTGTCCCAGGAGCTTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCAGCTCTTCATCCAGCTaGGCAGAAAGCCCCATTAGG +
Preference number: 4 (lower is better)
Translates to: RCPRSFEALGLVQSRQTPSSSSS*AESPIR
Trigger: CCTAATGGGGCTTTCTGCTCAGCTGGATGAAGAGCT...GGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAAGCTCCTGGGACACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR TCA 90 bp GAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACTGTCTAGTCCTACAGCATCGCTaGTTTCCAGAGCAGCCAATA +
Preference number: 4 (lower is better)
Translates to: EHGATPNAVQHNHYQHCLVLQHR*FPEQPI
Trigger: TATTGGCTGCTCTGGAAATCAGCGATGCTGTAGGAC...TAGACAGTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp GAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACTGTCTATCTGCCAAGGAGTCCTaGAGATGCTTCTGGATCTTC +
Preference number: 4 (lower is better)
Translates to: EHGATPNAVQHNHYQHCLSAKES*RCFWIF
Trigger: GAAGATCCAGAAGCATCTTCAGGACTCCTTGGCAGA...TAGACAGTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp AGGTGTCCCAGGAGCTTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCGATTTAAGGGGGAGATaGCAAGCCGCTCTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: RCPRSFEALGLVQSRQTPDLRGR*QAALSS
Trigger: AGAGGACAGAGCGGCTTGTCATCTCCCCCTTAAATC...GGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAAGCTCCTGGGACACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp GACTCCACGGTGTCTCCCGACTCCCAGGATTTTAAGGCTAAATGTGCACTTGGAGATTTAAGGGGGAGATaGCAAGCCGCTCTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: DSTVSPDSQDFKAKCALGDLRGR*QAALSS
Trigger: AGAGGACAGAGCGGCTTGTCATCTCCCCCTTAAATC...TCCAAGTGCACATTTAGCCTTAAAATCCTGGGAGTCGGGAGACACCGTGGAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp GATTTTAAGGCTAAATGTGCACTTGGAGGAACAGGGGCTGTAAGGCTATTTCTTCCATGCTGCTGGGGTTaGAGGTCAGGGTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: DFKAKCALGGTGAVRLFLPCCWG*RSGCCR
Trigger: GCGGCAGCACCCTGACCTTCAACCCCAGCAGCATGG...AAGAAATAGCCTTACAGCCCCTGTTCCTCCAAGTGCACATTTAGCCTTAAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp TTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCAGCCATGTGCAAGCAGGTGGAGTCTGGGTCTaGAGGGCATCTGGAAGGACT +
Preference number: 4 (lower is better)
Translates to: FEALGLVQSRQTPSHVQAGGVWV*RASGRT
Trigger: AGTCCTTCCAGATGCCCTTCAGACCCAGACTCCACC...TGCTTGCACATGGCTGGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp ACCAGACATCACAGACTGTGTAAAGACCATCAGAAAGGTGTCATTGAGGTTGCGATCTGCAGAGTCCCCTaGCCTTGGCTGGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: TRHHRLCKDHQKGVIEVAICRVP*PWLGGG
Trigger: TCCACCTCCCAGCCAAGGTCAGGGGACTCTGCAGAT...CGCAACCTCAATGACACCTTTCTGATGGTCTTTACACAGTCTGTGATGTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp AGGTGTCCCAGGAGCTTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCCTATTTCTGGATGCCTaGAGTTCCGGTAGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: RCPRSFEALGLVQSRQTPLFLDA*SSGSSS
Trigger: CGAGGAGCTACCGGAACTTCAGGCATCCAGAAATAG...GGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAAGCTCCTGGGACACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp GAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACTGTCTAGTGTCCCAGGAGCTTTaGAGCACTAGGTTTGGTTCA +
Preference number: 4 (lower is better)
Translates to: EHGATPNAVQHNHYQHCLVSQEL*STRFGS
Trigger: TGAACCAAACCTAGTGCTTCAAAGCTCCTGGGACAC...TAGACAGTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp CTTCCTGCATACATAGGACACTGGGCTTCTGACTGCAAGTTTCTCCTTTCCAAAGTTTTGCACGAACTCTaGGCGCCTCAGGGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LPAYIGHWASDCKFLLSKVLHEL*APQGAG
Trigger: CCCAGCACCCTGAGGCGCTCAGAGTTCGTGCAAAAC...TTTGGAAAGGAGAAACTTGCAGTCAGAAGCCCAGTGTCCTATGTATGCAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS-3UTR GCA 90 bp AGTGAGCATCAAGGTTTACAACCCAATCGAGGAGAACAAGATCTGTGGTGTGCTGGGTACTGTTCTGAGTaGGGGTGGCTCCCTCCCACT +
Preference number: 4 (lower is better)
Translates to: SEHQGLQPNRGEQDLWCAGYCSE*GWLPPT
Trigger: AGTGGGAGGGAGCCACCCGCACTCAGAACAGTACCC...AGCACACCACAGATCTTGTTCTCCTCGATTGGGTTGTAAACCTTGATGCTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR GCA 90 bp TCCCAGGATTTTAAGGCTAAATGTGCACTTGGAGGAACAGGGGCTGTAAGGCTAGGTACCTGTGCCTGCTaGATGGGTACCATGATCCGC +
Preference number: 4 (lower is better)
Translates to: SQDFKAKCALGGTGAVRLGTCAC*MGTMIR
Trigger: GCGGATCATGGTACCCATGCAGCAGGCACAGGTACC...TAGCCTTACAGCCCCTGTTCCTCCAAGTGCACATTTAGCCTTAAAATCCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp AGCATGGAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACAATGTTTGGTACCTGTaGCTGCTGCATGGGTACCAT +
Preference number: 4 (lower is better)
Translates to: SMEHGATPNAVQHNHYQHNVWYL*LLHGYH
Trigger: ATGGTACCCATGCAGCAGGCACAGGTACCAAACATT...GTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTCCATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp CAAGGTTTACAACCCAATCGAGGAGAACAAGATCTGTGGTGTGCTCCACCATGCCACCACTTTCACACATaGGGACTCCCGGATGTGCTG +
Preference number: 4 (lower is better)
Translates to: QGLQPNRGEQDLWCAPPCHHFHT*GLPDVL
Trigger: CAGCACATCCGGGAGTCCGCATGTGTGAAAGTGGTG...GCATGGTGGAGCACACCACAGATCTTGTTCTCCTCGATTGGGTTGTAAACCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp TCCCAGGATTTTAAGGCTAAATGTGCACTTGGAGGAACAGGGGCTGTAAGGCTATGCACCCTCTCAAACTaGTCCAGGTCCCGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: SQDFKAKCALGGTGAVRLCTLSN*SRSRCP
Trigger: AGGACACCGGGACCTGGAGCAGTTTGAGAGGGTGCA...TAGCCTTACAGCCCCTGTTCCTCCAAGTGCACATTTAGCCTTAAAATCCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp GAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACTGTCTAAGCAGTGGCTTTAATTaGTCCAGAGCCTGGTGCACA +
Preference number: 4 (lower is better)
Translates to: EHGATPNAVQHNHYQHCLSSGFN*SRAWCT
Trigger: TGTGCACCAGGCTCTGGAGCAATTAAAGCCACTGCT...TAGACAGTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp TCAGCTCAAAGCAGAACTAATACTTTTAATGGAATGGCTGGAGCTCTCATACTGCTGAGCGCCTCAGGGTaGTGGGTGCTGTGCGGCGGA +
Preference number: 4 (lower is better)
Translates to: SAQSRTNTFNGMAGALILLSASG*WVLCGG
Trigger: TCCGCCGCACAGCACCCAGCACCCTGAGGCGCTCAG...CAGTATGAGAGCTCCAGCCATTCCATTAAAAGTATTAGTTCTGCTTTGAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS-3UTR GCA 90 bp AGCATGGAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACGTTTTCTTGCTGTTTTaGACGAACTCTGAGCGCCTC +
Preference number: 4 (lower is better)
Translates to: SMEHGATPNAVQHNHYQHVFLLF*TNSERL
Trigger: GAGGCGCTCAGAGTTCGTGCAAAACAGCAAGAAAAC...GTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTCCATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS-3UTR CCA 90 bp AGCAGGGAGGCGGGAGGGTTGCTTGAGCCCAGGCGTTTAAGACCAGCCTGGGCAAGATTATCCAACTCTTaGGATGTGAATTCACAAATG +
Preference number: 4 (lower is better)
Translates to: SREAGGLLEPRRLRPAWARLSNS*DVNSQM
Trigger: CATTTGTGAATTCACATCCCAAGAGTTGGATAATCT...TGCCCAGGCTGGTCTTAAACGCCTGGGCTCAAGCAACCCTCCCGCCTCCCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR CCA 90 bp GCTTATCCCAATTCAAGTAAGTCACAGGTGTTATGTTGTCTGCATCTATGGATGTTCCCACTCCACGCCTaGGCTTCTCGGGGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: AYPNSSKSQVLCCLHLWMFPLHA*ASRGPS
Trigger: GGAGGGCCCCCGAGAAGCCCAGGCGTGGAGTGGGAA...CATCCATAGATGCAGACAACATAACACCTGTGACTTACTTGAATTGGGATAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR CCA 90 bp CAAGGTTTACAACCCAATCGAGGAGAACAAGATCTGTGGTGTGCTCCACCATGCTGTTCTGAGTGCGGGTaGCTCCCTCCCACTGTAGAA +
Preference number: 4 (lower is better)
Translates to: QGLQPNRGEQDLWCAPPCCSECG*LPPTVE
Trigger: TTCTACAGTGGGAGGGAGCCACCCGCACTCAGAACA...GCATGGTGGAGCACACCACAGATCTTGTTCTCCTCGATTGGGTTGTAAACCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR CCA 90 bp AGGTGTCCCAGGAGCTTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCGTCGAGATAGGAGCTTaGGGGATACCGCATTCGTTC +
Preference number: 4 (lower is better)
Translates to: RCPRSFEALGLVQSRQTPVEIGA*GIPHSF
Trigger: GAACGAATGCGGTATCCCCCAAGCTCCTATCTCGAC...GGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAAGCTCCTGGGACACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR CCA 90 bp TGTGGTGTGCTCCACCATGCCATGGTTAAGCAACGCAGACAGGGCCTGTGTCTCCATTACTCTCTGTACTaGTTTGATGAGGAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: CGVLHHAMVKQRRQGLCLHYSLY*FDEEGA
Trigger: GGCTCCTTCCTCATCAAACCAGTACAGAGAGTAATG...GAGACACAGGCCCTGTCTGCGTTGCTTAACCATGGCATGGTGGAGCACACCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp CTTCCTGCATACATAGGACACTGGGCTTCTGACTGCAAGTTTCTCCTTTCCAAACCCTGGGCGTACTGGTaGAACTTGGGCAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: LPAYIGHWASDCKFLLSKPWAYW*NLGSSS
Trigger: GGATGAGCTGCCCAAGTTCCACCAGTACGCCCAGGG...TTTGGAAAGGAGAAACTTGCAGTCAGAAGCCCAGTGTCCTATGTATGCAGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp AGCCATGAATTCTTTTCATCTGAGTTGGCATCCGGTCAGCTGAGCATGGAACATAGGCCCTGGGCGTACTaGTGGAACTTGGGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: SHEFFSSELASGQLSMEHRPWAY*WNLGSS
Trigger: TGAGCTGCCCAAGTTCCACCAGTACGCCCAGGGCCT...ATGTTCCATGCTCAGCTGACCGGATGCCAACTCAGATGAAAAGAATTCATGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp TGTGGTGTGCTCCACCATGCCATGGTTAAGCAACGCAGACAGGGCCTGTGTCTCCTGCTGTGCTCTTCGTaGAAGATGGCAATAAGGTTT +
Preference number: 4 (lower is better)
Translates to: CGVLHHAMVKQRRQGLCLLLCSS*KMAIRF
Trigger: AAACCTTATTGCCATCTTCCACGAAGAGCACAGCAG...GAGACACAGGCCCTGTCTGCGTTGCTTAACCATGGCATGGTGGAGCACACCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp CAAGGTTTACAACCCAATCGAGGAGAACAAGATCTGTGGTGTGCTCCACCATGCATCAGCCAGCGGTTCTaGCTGCCCATGGGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: QGLQPNRGEQDLWCAPPCISQRF*LPMGSF
Trigger: AAAAGACCCCATGGGCAGCCAGAACCGCTGGCTGAT...GCATGGTGGAGCACACCACAGATCTTGTTCTCCTCGATTGGGTTGTAAACCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp CATTCCAAGATAGGCTTCATAGCTGGGGAAGATCTTAAGATTCTTGGTCTAAGGGTGCTGCCGCTGTTCTaGCGTGGGAACCTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: HSKIGFIAGEDLKILGLRVLPLF*RGNLGE
Trigger: CTCCCCCAGGTTCCCACGCCAGAACAGCGGCAGCAC...CCTTAGACCAAGAATCTTAAGATCTTCCCCAGCTATGAAGCCTATCTTGGAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp CTTCCTGCATACATAGGACACTGGGCTTCTGACTGCAAGTTTCTCCTTTCCAAAACCTTGGCTGGGAGGTaGAGTCTGGGTCTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: LPAYIGHWASDCKFLLSKTLAGR*SLGLKG
Trigger: GCCCTTCAGACCCAGACTCCACCTCCCAGCCAAGGT...TTTGGAAAGGAGAAACTTGCAGTCAGAAGCCCAGTGTCCTATGTATGCAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp AGTGAGCATCAAGGTTTACAACCCAATCGAGGAGAACAAGATCTGTGGTGTGCTTCCCCTGACCTTGGCTaGGAGGTGGAGTCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: SEHQGLQPNRGEQDLWCASPDLG*EVESGS
Trigger: AGACCCAGACTCCACCTCCCAGCCAAGGTCAGGGGA...AGCACACCACAGATCTTGTTCTCCTCGATTGGGTTGTAAACCTTGATGCTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp GAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACTGTCTACACGCTCAGCTCATTTaGGTTTCGTGCCTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: EHGATPNAVQHNHYQHCLHAQLI*VSCLEG
Trigger: ACCTTCAAGGCACGAAACCCAAATGAGCTGAGCGTG...TAGACAGTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp ACCAGACATCACAGACTGTGTAAAGACCATCAGAAAGGTGTCATTGAGGTTGCGGCTGAGCATGGAACATaGGGCCACCCCAAACGCCGT +
Preference number: 4 (lower is better)
Translates to: TRHHRLCKDHQKGVIEVAAEHGT*GHPKRR
Trigger: ACGGCGTTTGGGGTGGCCCCATGTTCCATGCTCAGC...CGCAACCTCAATGACACCTTTCTGATGGTCTTTACACAGTCTGTGATGTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp GAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACTGTCTATATGAGAATGTGTGCTaGACACTGGAGGTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: EHGATPNAVQHNHYQHCLYENVC*TLEVSQ
Trigger: CTGGGACACCTCCAGTGTCCAGCACACATTCTCATA...TAGACAGTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp GACTCCACGGTGTCTCCCGACTCCCAGGATTTTAAGGCTAAATGTGCACTTGGAGACCAGCAGACACTGTaGATGTTAGGACTCCACGGT +
Preference number: 4 (lower is better)
Translates to: DSTVSPDSQDFKAKCALGDQQTL*MLGLHG
Trigger: ACCGTGGAGTCCTAACATCCACAGTGTCTGCTGGTC...TCCAAGTGCACATTTAGCCTTAAAATCCTGGGAGTCGGGAGACACCGTGGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp CACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGACACTGTGGGACCAGCAGACACTGTaGATGTTAGGACTCCACGGT +
Preference number: 4 (lower is better)
Translates to: HKRTLALLPSDHDQQTLWDQQTL*MLGLHG
Trigger: ACCGTGGAGTCCTAACATCCACAGTGTCTGCTGGTC...CCACAGTGTCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp TCAGCTCAAAGCAGAACTAATACTTTTAATGGAATGGCTGGAGCTCTCATACTGGTCGGGGTACTGTTCTaGGTGCGGGTGGCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: SAQSRTNTFNGMAGALILVGVLF*VRVAPS
Trigger: GGAGGGAGCCACCCGCACTCAGAACAGTACCCCGAC...CAGTATGAGAGCTCCAGCCATTCCATTAAAAGTATTAGTTCTGCTTTGAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR TCA 90 bp AGGTGTCCCAGGAGCTTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCGGGAGCACTGGCTTCTaGAGAGTTTTTAGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: RCPRSFEALGLVQSRQTPGSTGF*RVFSWE
Trigger: TTCCCAGCTAAAAACTCTTCAGAAGCCAGTGCTCCC...GGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAAGCTCCTGGGACACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR TCA 90 bp TCCCAGGATTTTAAGGCTAAATGTGCACTTGGAGGAACAGGGGCTGTAAGGCTAGAGGAGCAAAGCCAGTaGGATGCTTCAGGTGACTGC +
Preference number: 4 (lower is better)
Translates to: SQDFKAKCALGGTGAVRLEEQSQ*DASGDC
Trigger: GCAGTCACCTGAAGCATCTCACTGGCTTTGCTCCTC...TAGCCTTACAGCCCCTGTTCCTCCAAGTGCACATTTAGCCTTAAAATCCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp CACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGACACTGTGGAGTCTTGAGCAGCATTaGAGTTCCGTTCTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: HKRTLALLPSDHDQQTLWSLEQH*SSVLPG
Trigger: TCCAGGCAGAACGGAACTTCAATGCTGCTCAAGACT...CCACAGTGTCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp GCTTATCCCAATTCAAGTAAGTCACAGGTGTTATGTTGTCTGCATCTATGGATGCCATGCTGCTGGGGTTaGAGGTCAGGGTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: AYPNSSKSQVLCCLHLWMPCCWG*RSGCCR
Trigger: GCGGCAGCACCCTGACCTTCAACCCCAGCAGCATGG...CATCCATAGATGCAGACAACATAACACCTGTGACTTACTTGAATTGGGATAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp GACTCCACGGTGTCTCCCGACTCCCAGGATTTTAAGGCTAAATGTGCACTTGGAAGGATCTTGAGTTTCTaGTTGGCTGACACGCTCAGC +
Preference number: 4 (lower is better)
Translates to: DSTVSPDSQDFKAKCALGRILSF*LADTLS
Trigger: GCTGAGCGTGTCAGCCAATCAGAAACTCAAGATCCT...TCCAAGTGCACATTTAGCCTTAAAATCCTGGGAGTCGGGAGACACCGTGGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp GACTCCACGGTGTCTCCCGACTCCCAGGATTTTAAGGCTAAATGTGCACTTGGAAGGACACTGGGCTTCTaGCTGCAAGTTTCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: DSTVSPDSQDFKAKCALGRTLGF*LQVSPF
Trigger: GAAAGGAGAAACTTGCAGTCAGAAGCCCAGTGTCCT...TCCAAGTGCACATTTAGCCTTAAAATCCTGGGAGTCGGGAGACACCGTGGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp CACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGACACTGTGGTCAGAAAGGTGTCATTaGGGTTGCGGTATGGTGGCT +
Preference number: 4 (lower is better)
Translates to: HKRTLALLPSDHDQQTLWSERCH*GCGMVA
Trigger: AGCCACCATACCGCAACCTCAATGACACCTTTCTGA...CCACAGTGTCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp ACCAGACATCACAGACTGTGTAAAGACCATCAGAAAGGTGTCATTGAGGTTGCGACAAGCCCTTGGGCTTaGGGACCAGGCTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: TRHHRLCKDHQKGVIEVATSPWA*GPGFIS
Trigger: GGAGATGAAGCCTGGTCCGCAAGCCCAAGGGCTTGT...CGCAACCTCAATGACACCTTTCTGATGGTCTTTACACAGTCTGTGATGTCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR GCA 90 bp TTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCAGCCATGTGCAAGCATCGAGTCCAGGTCAGTaGTGCCGTCTCCCTGTGAAT +
Preference number: 4 (lower is better)
Translates to: FEALGLVQSRQTPSHVQASSPGQ*CRLPVN
Trigger: ATTCACAGGGAGACGGCAGCACTGACCTGGACTCGA...TGCTTGCACATGGCTGGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR GCA 90 bp AGCCATGAATTCTTTTCATCTGAGTTGGCATCCGGTCAGCTGAGCATGGAACATGGTACCTGTGCCTGCTaGATGGGTACCATGATCCGC +
Preference number: 4 (lower is better)
Translates to: SHEFFSSELASGQLSMEHGTCAC*MGTMIR
Trigger: GCGGATCATGGTACCCATGCAGCAGGCACAGGTACC...ATGTTCCATGCTCAGCTGACCGGATGCCAACTCAGATGAAAAGAATTCATGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp CACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGACACTGTGGTTTGGTACCTGTGCCTaGTGCATGGGTACCATGATC +
Preference number: 4 (lower is better)
Translates to: HKRTLALLPSDHDQQTLWFGTCA*CMGTMI
Trigger: GATCATGGTACCCATGCAGCAGGCACAGGTACCAAA...CCACAGTGTCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp GACTCCACGGTGTCTCCCGACTCCCAGGATTTTAAGGCTAAATGTGCACTTGGAAGCAGTGGCTTTAATTaGTCCAGAGCCTGGTGCACA +
Preference number: 4 (lower is better)
Translates to: DSTVSPDSQDFKAKCALGSSGFN*SRAWCT
Trigger: TGTGCACCAGGCTCTGGAGCAATTAAAGCCACTGCT...TCCAAGTGCACATTTAGCCTTAAAATCCTGGGAGTCGGGAGACACCGTGGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp GACTCCACGGTGTCTCCCGACTCCCAGGATTTTAAGGCTAAATGTGCACTTGGATGCAGAACTCTGCTGTaGTCTTCGTGGAAGATGGCA +
Preference number: 4 (lower is better)
Translates to: DSTVSPDSQDFKAKCALGCRTLL*SSWKMA
Trigger: TGCCATCTTCCACGAAGAGCACAGCAGAGTTCTGCA...TCCAAGTGCACATTTAGCCTTAAAATCCTGGGAGTCGGGAGACACCGTGGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp CTCATAGTCACTAAGTCATTTGCAAAGCCCCAGGGTCCATTTCAAATTCTAGAGGGGGAGGAGCTGCCGTaGTCAGACTCTGTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: LIVTKSFAKPQGPFQILEGEELP*SDSVEE
Trigger: CTCCTCCACAGAGTCTGAGCACGGCAGCTCCTCCCC...CTCTAGAATTTGAAATGGACCCTGGGGCTTTGCAAATGACTTAGTGACTATGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp CACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGACACTGTGGGGCGTGGCAGTGGGTTaGTTTACATCTCTAGCTACA +
Preference number: 4 (lower is better)
Translates to: HKRTLALLPSDHDQQTLWGVAVG*FTSLAT
Trigger: TGTAGCTAGAGATGTAAAGCAACCCACTGCCACGCC...CCACAGTGTCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp CATTCCAAGATAGGCTTCATAGCTGGGGAAGATCTTAAGATTCTTGGTCTAAGGGCCATGTGCAAGCACTaGCTCACGGGGTGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: HSKIGFIAGEDLKILGLRAMCKH*LTGCPE
Trigger: CTCTGGGCACCCCGTGAGGCAGTGCTTGCACATGGC...CCTTAGACCAAGAATCTTAAGATCTTCCCCAGCTATGAAGCCTATCTTGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp TGTGTAAAGACCATCAGAAAGGTGTCATTGAGGTTGCGGTATGGTGGCTTACACAAACTCCCAGCCATGTaGAAGCACTGCCTCACGGGG +
Preference number: 4 (lower is better)
Translates to: CVKTIRKVSLRLRYGGLHKLPAM*KHCLTG
Trigger: CCCCGTGAGGCAGTGCTTGCACATGGCTGGGAGTTT...GTGTAAGCCACCATACCGCAACCTCAATGACACCTTTCTGATGGTCTTTACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp AGCCATGAATTCTTTTCATCTGAGTTGGCATCCGGTCAGCTGAGCATGGAACATAAACTCCCAGCCATGTaGAAGCACTGCCTCACGGGG +
Preference number: 4 (lower is better)
Translates to: SHEFFSSELASGQLSMEHKLPAM*KHCLTG
Trigger: CCCCGTGAGGCAGTGCTTGCACATGGCTGGGAGTTT...ATGTTCCATGCTCAGCTGACCGGATGCCAACTCAGATGAAAAGAATTCATGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp GAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACTGTCTAATGTATGAGAATGTGTaGTGGACACTGGAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: EHGATPNAVQHNHYQHCLMYENV*WTLEVS
Trigger: GGACACCTCCAGTGTCCAGCACACATTCTCATACAT...TAGACAGTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp ACCAGACATCACAGACTGTGTAAAGACCATCAGAAAGGTGTCATTGAGGTTGCGGAGGAGCGTCATTTCTaGAGTGCCCAGAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: TRHHRLCKDHQKGVIEVAEERHF*SAQSWL
Trigger: CAGCCAGCTCTGGGCACTGCAGAAATGACGCTCCTC...CGCAACCTCAATGACACCTTTCTGATGGTCTTTACACAGTCTGTGATGTCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543621.6
CDS-3UTR CCA 90 bp GAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACTGTCTAGCAGGTTTTAGGTTCTaGTCAACCAGCAAATGGGGA +
Preference number: 4 (lower is better)
Translates to: EHGATPNAVQHNHYQHCLAGFRF*STSKWG
Trigger: TCCCCATTTGCTGGTTGACCAGAACCTAAAACCTGC...TAGACAGTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR CCA 90 bp CACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGACACTGTGGACCAGTGATGAAGACTaGGAGGAGAGGAGCGTCATT +
Preference number: 4 (lower is better)
Translates to: HKRTLALLPSDHDQQTLWTSDED*EERSVI
Trigger: AATGACGCTCCTCTCCTCCCAGTCTTCATCACTGGT...CCACAGTGTCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp GAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACTGTCTATTTCAAGCAGCGCAATaGCCTCATCATGATTCTGGC +
Preference number: 4 (lower is better)
Translates to: EHGATPNAVQHNHYQHCLFQAAQ*PHHDSG
Trigger: GCCAGAATCATGATGAGGCCATTGCGCTGCTTGAAA...TAGACAGTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp AGGTGTCCCAGGAGCTTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCGGCACTTTATCTGGGTaGGATTCTGGGGTGGAATTC +
Preference number: 4 (lower is better)
Translates to: RCPRSFEALGLVQSRQTPGTLSG*DSGVEF
Trigger: GAATTCCACCCCAGAATCCCACCCAGATAAAGTGCC...GGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAAGCTCCTGGGACACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp AGCATGGAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACCTGCTGTGCTCTTCGTaGAAGATGGCAATAAGGTTT +
Preference number: 4 (lower is better)
Translates to: SMEHGATPNAVQHNHYQHLLCSS*KMAIRF
Trigger: AAACCTTATTGCCATCTTCCACGAAGAGCACAGCAG...GTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTCCATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp GAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACTGTCTACAGACTGGCGGTCAATaGTTTTCCTCTCAAATGGCT +
Preference number: 4 (lower is better)
Translates to: EHGATPNAVQHNHYQHCLQTGGQ*FSSQMA
Trigger: AGCCATTTGAGAGGAAAACCATTGACCGCCAGTCTG...TAGACAGTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp AGCATGGAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACTTGGTCACATTCTTTTaGCGGAGGAGATGCATCTTG +
Preference number: 4 (lower is better)
Translates to: SMEHGATPNAVQHNHYQHLVTFF*RRRCIL
Trigger: CAAGATGCATCTCCTCCGCCAAAAGAATGTGACCAA...GTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTCCATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp CATTCCAAGATAGGCTTCATAGCTGGGGAAGATCTTAAGATTCTTGGTCTAAGGCAAAGGCAGCAAGGCTaGGTGGCAGGCAACGTGGGC +
Preference number: 4 (lower is better)
Translates to: HSKIGFIAGEDLKILGLRQRQQG*VAGNVG
Trigger: GCCCACGTTGCCTGCCACCCAGCCTTGCTGCCTTTG...CCTTAGACCAAGAATCTTAAGATCTTCCCCAGCTATGAAGCCTATCTTGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp AGGTGTCCCAGGAGCTTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCTATGAGAATGTGTGCTaGACACTGGAGGTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: RCPRSFEALGLVQSRQTPYENVC*TLEVSQ
Trigger: CTGGGACACCTCCAGTGTCCAGCACACATTCTCATA...GGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAAGCTCCTGGGACACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp AGTGAGCATCAAGGTTTACAACCCAATCGAGGAGAACAAGATCTGTGGTGTGCTTCTTTTCCATGGGCCTaGGCTGGGCTGTGGACAGGT +
Preference number: 4 (lower is better)
Translates to: SEHQGLQPNRGEQDLWCASFPWA*AGLWTG
Trigger: ACCTGTCCACAGCCCAGCCCAGGCCCATGGAAAAGA...AGCACACCACAGATCTTGTTCTCCTCGATTGGGTTGTAAACCTTGATGCTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS-3UTR TCA 90 bp TTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCAGCCATGTGCAAGCAGAATATTCCGGAATCTaGAACAGGGCGCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: FEALGLVQSRQTPSHVQAEYSGI*NRALWE
Trigger: CTCCCAGAGCGCCCTGTTTCAGATTCCGGAATATTC...TGCTTGCACATGGCTGGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR TCA 90 bp ACCAGACATCACAGACTGTGTAAAGACCATCAGAAAGGTGTCATTGAGGTTGCGGCTGCCGTCTCCCTGTaGATGTGTTGCTGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: TRHHRLCKDHQKGVIEVAAAVSL*MCCCFH
Trigger: ATGGAAGCAGCAACACATTCACAGGGAGACGGCAGC...CGCAACCTCAATGACACCTTTCTGATGGTCTTTACACAGTCTGTGATGTCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR TCA 90 bp CAAGGTTTACAACCCAATCGAGGAGAACAAGATCTGTGGTGTGCTCCACCATGCGAGTTTCTGATTGGCTaGCACGCTCAGCTCATTTGG +
Preference number: 4 (lower is better)
Translates to: QGLQPNRGEQDLWCAPPCEFLIG*HAQLIW
Trigger: CCAAATGAGCTGAGCGTGTCAGCCAATCAGAAACTC...GCATGGTGGAGCACACCACAGATCTTGTTCTCCTCGATTGGGTTGTAAACCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp CAAGGTTTACAACCCAATCGAGGAGAACAAGATCTGTGGTGTGCTCCACCATGCTGCAGAACTCTGCTGTaGTCTTCGTGGAAGATGGCA +
Preference number: 4 (lower is better)
Translates to: QGLQPNRGEQDLWCAPPCCRTLL*SSWKMA
Trigger: TGCCATCTTCCACGAAGAGCACAGCAGAGTTCTGCA...GCATGGTGGAGCACACCACAGATCTTGTTCTCCTCGATTGGGTTGTAAACCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp TCAGCTCAAAGCAGAACTAATACTTTTAATGGAATGGCTGGAGCTCTCATACTGGGGGAGGAGCTGCCGTaGTCAGACTCTGTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: SAQSRTNTFNGMAGALILGEELP*SDSVEE
Trigger: CTCCTCCACAGAGTCTGAGCACGGCAGCTCCTCCCC...CAGTATGAGAGCTCCAGCCATTCCATTAAAAGTATTAGTTCTGCTTTGAGCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp TTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCAGCCATGTGCAAGCAAGCCTGGGCTGTTCTTaGACATCCTTTGACGAGGTC +
Preference number: 4 (lower is better)
Translates to: FEALGLVQSRQTPSHVQASLGCS*TSFDEV
Trigger: GACCTCGTCAAAGGATGTGCAAGAACAGCCCAGGCT...TGCTTGCACATGGCTGGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp TCCCAGGATTTTAAGGCTAAATGTGCACTTGGAGGAACAGGGGCTGTAAGGCTATGCCTTCTGCCTCACTaGCATCTGGCTCTGTACTTC +
Preference number: 4 (lower is better)
Translates to: SQDFKAKCALGGTGAVRLCLLPH*HLALYF
Trigger: GAAGTACAGAGCCAGATGGCAGTGAGGCAGAAGGCA...TAGCCTTACAGCCCCTGTTCCTCCAAGTGCACATTTAGCCTTAAAATCCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp GACTCCACGGTGTCTCCCGACTCCCAGGATTTTAAGGCTAAATGTGCACTTGGACAAAATAGACCTGGTTaGCTTCTGCCTCACTGCCAT +
Preference number: 4 (lower is better)
Translates to: DSTVSPDSQDFKAKCALGQNRPG*LLPHCH
Trigger: ATGGCAGTGAGGCAGAAGGCAACCAGGTCTATTTTG...TCCAAGTGCACATTTAGCCTTAAAATCCTGGGAGTCGGGAGACACCGTGGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp GAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACTGTCTACACTGGGCTTCTGACTaGAAGTTTCTCCTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: EHGATPNAVQHNHYQHCLHWASD*KFLLSK
Trigger: TTTGGAAAGGAGAAACTTGCAGTCAGAAGCCCAGTG...TAGACAGTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp TTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCAGCCATGTGCAAGCAGGACTCTTGCATTACTaGCTTCTGACCACGACCAGC +
Preference number: 4 (lower is better)
Translates to: FEALGLVQSRQTPSHVQAGLLHY*LLTTTS
Trigger: GCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCC...TGCTTGCACATGGCTGGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp GAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACTGTCTACTCTACAAAACCTTCTaGAAAAATGCCTCTTCGGCC +
Preference number: 4 (lower is better)
Translates to: EHGATPNAVQHNHYQHCLLYKTF*KNASSA
Trigger: GGCCGAAGAGGCATTTTTCCAGAAGGTTTTGTAGAG...TAGACAGTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR CCA 90 bp TGTGTAAAGACCATCAGAAAGGTGTCATTGAGGTTGCGGTATGGTGGCTTACACTTTGGCTCCAGGGCTTaGAATCTGTACAGGGCGACC +
Preference number: 4 (lower is better)
Translates to: CVKTIRKVSLRLRYGGLHFGSRA*NLYRAT
Trigger: GGTCGCCCTGTACAGATTCCAAGCCCTGGAGCCAAA...GTGTAAGCCACCATACCGCAACCTCAATGACACCTTTCTGATGGTCTTTACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR CCA 90 bp CAAGGTTTACAACCCAATCGAGGAGAACAAGATCTGTGGTGTGCTCCACCATGCACCAGTGATGAAGACTaGGAGGAGAGGAGCGTCATT +
Preference number: 4 (lower is better)
Translates to: QGLQPNRGEQDLWCAPPCTSDED*EERSVI
Trigger: AATGACGCTCCTCTCCTCCCAGTCTTCATCACTGGT...GCATGGTGGAGCACACCACAGATCTTGTTCTCCTCGATTGGGTTGTAAACCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp GACTCCACGGTGTCTCCCGACTCCCAGGATTTTAAGGCTAAATGTGCACTTGGATTTCAAGCAGCGCAATaGCCTCATCATGATTCTGGC +
Preference number: 4 (lower is better)
Translates to: DSTVSPDSQDFKAKCALGFQAAQ*PHHDSG
Trigger: GCCAGAATCATGATGAGGCCATTGCGCTGCTTGAAA...TCCAAGTGCACATTTAGCCTTAAAATCCTGGGAGTCGGGAGACACCGTGGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp GACTCCACGGTGTCTCCCGACTCCCAGGATTTTAAGGCTAAATGTGCACTTGGATTCTGTACCAGCTTATaGGGCCCTGTAAACATGCTC +
Preference number: 4 (lower is better)
Translates to: DSTVSPDSQDFKAKCALGFCTSL*GPVNML
Trigger: GAGCATGTTTACAGGGCCCCATAAGCTGGTACAGAA...TCCAAGTGCACATTTAGCCTTAAAATCCTGGGAGTCGGGAGACACCGTGGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp CATTCCAAGATAGGCTTCATAGCTGGGGAAGATCTTAAGATTCTTGGTCTAAGGAGGCCCTGGGCGTACTaGTGGAACTTGGGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: HSKIGFIAGEDLKILGLRRPWAY*WNLGSS
Trigger: TGAGCTGCCCAAGTTCCACCAGTACGCCCAGGGCCT...CCTTAGACCAAGAATCTTAAGATCTTCCCCAGCTATGAAGCCTATCTTGGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp ACCAGACATCACAGACTGTGTAAAGACCATCAGAAAGGTGTCATTGAGGTTGCGTTGGTGAAGAGGCCCTaGGCGTACTGGTGGAACTTG +
Preference number: 4 (lower is better)
Translates to: TRHHRLCKDHQKGVIEVALVKRP*AYWWNL
Trigger: CAAGTTCCACCAGTACGCCCAGGGCCTCTTCACCAA...CGCAACCTCAATGACACCTTTCTGATGGTCTTTACACAGTCTGTGATGTCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp AGCCATGAATTCTTTTCATCTGAGTTGGCATCCGGTCAGCTGAGCATGGAACATTTGGTGAAGAGGCCCTaGGCGTACTGGTGGAACTTG +
Preference number: 4 (lower is better)
Translates to: SHEFFSSELASGQLSMEHLVKRP*AYWWNL
Trigger: CAAGTTCCACCAGTACGCCCAGGGCCTCTTCACCAA...ATGTTCCATGCTCAGCTGACCGGATGCCAACTCAGATGAAAAGAATTCATGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp CAAGGTTTACAACCCAATCGAGGAGAACAAGATCTGTGGTGTGCTCCACCATGCAATTGCTCCAGAGCCTaGTGCACAAAGTCACAGTGG +
Preference number: 4 (lower is better)
Translates to: QGLQPNRGEQDLWCAPPCNCSRA*CTKSQW
Trigger: CCACTGTGACTTTGTGCACCAGGCTCTGGAGCAATT...GCATGGTGGAGCACACCACAGATCTTGTTCTCCTCGATTGGGTTGTAAACCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp CACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGACACTGTGGCAGACTGGCGGTCAATaGTTTTCCTCTCAAATGGCT +
Preference number: 4 (lower is better)
Translates to: HKRTLALLPSDHDQQTLWQTGGQ*FSSQMA
Trigger: AGCCATTTGAGAGGAAAACCATTGACCGCCAGTCTG...CCACAGTGTCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp TTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCAGCCATGTGCAAGCAGGCTTTCGAGCAGACTaGCGGTCAATGGTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: FEALGLVQSRQTPSHVQAGFRAD*RSMVFL
Trigger: GAGGAAAACCATTGACCGCCAGTCTGCTCGAAAGCC...TGCTTGCACATGGCTGGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp TCAGCTCAAAGCAGAACTAATACTTTTAATGGAATGGCTGGAGCTCTCATACTGTGGCAGGCCCAGGAGTaGCTTTCGAGCAGACTGGCG +
Preference number: 4 (lower is better)
Translates to: SAQSRTNTFNGMAGALILWQAQE*LSSRLA
Trigger: CGCCAGTCTGCTCGAAAGCCACTCCTGGGCCTGCCA...CAGTATGAGAGCTCCAGCCATTCCATTAAAAGTATTAGTTCTGCTTTGAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp AGCCATGAATTCTTTTCATCTGAGTTGGCATCCGGTCAGCTGAGCATGGAACATATCAGCCAGCGGTTCTaGCTGCCCATGGGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: SHEFFSSELASGQLSMEHISQRF*LPMGSF
Trigger: AAAAGACCCCATGGGCAGCCAGAACCGCTGGCTGAT...ATGTTCCATGCTCAGCTGACCGGATGCCAACTCAGATGAAAAGAATTCATGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp CTCATAGTCACTAAGTCATTTGCAAAGCCCCAGGGTCCATTTCAAATTCTAGAGACCTTGGCTGGGAGGTaGAGTCTGGGTCTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: LIVTKSFAKPQGPFQILETLAGR*SLGLKG
Trigger: GCCCTTCAGACCCAGACTCCACCTCCCAGCCAAGGT...CTCTAGAATTTGAAATGGACCCTGGGGCTTTGCAAATGACTTAGTGACTATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp TGTGTAAAGACCATCAGAAAGGTGTCATTGAGGTTGCGGTATGGTGGCTTACACGGTAGCTCCTCGGCGTaGCAGTGGGTTGCTTTACAT +
Preference number: 4 (lower is better)
Translates to: CVKTIRKVSLRLRYGGLHGSSSA*QWVALH
Trigger: ATGTAAAGCAACCCACTGCCACGCCGAGGAGCTACC...GTGTAAGCCACCATACCGCAACCTCAATGACACCTTTCTGATGGTCTTTACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp AGGTGTCCCAGGAGCTTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCTTGCCCATTTCGTCCTaGTACGGAGTAGCCAACTAT +
Preference number: 4 (lower is better)
Translates to: RCPRSFEALGLVQSRQTPLPISS*YGVANY
Trigger: ATAGTTGGCTACTCCGTACCAGGACGAAATGGGCAA...GGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAAGCTCCTGGGACACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp AGTGAGCATCAAGGTTTACAACCCAATCGAGGAGAACAAGATCTGTGGTGTGCTCTGTCTTCCGGAGCCTaGGCTGTTCTTGCACATCCT +
Preference number: 4 (lower is better)
Translates to: SEHQGLQPNRGEQDLWCALSSGA*AVLAHP
Trigger: AGGATGTGCAAGAACAGCCCAGGCTCCGGAAGACAG...AGCACACCACAGATCTTGTTCTCCTCGATTGGGTTGTAAACCTTGATGCTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp CTCATAGTCACTAAGTCATTTGCAAAGCCCCAGGGTCCATTTCAAATTCTAGAGGGGTGGCAGGCAACGTaGGCTCAGGTGTACTCGGTT +
Preference number: 4 (lower is better)
Translates to: LIVTKSFAKPQGPFQILEGWQAT*AQVYSV
Trigger: AACCGAGTACACCTGAGCCCACGTTGCCTGCCACCC...CTCTAGAATTTGAAATGGACCCTGGGGCTTTGCAAATGACTTAGTGACTATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp ACACTCTTCACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGATGCTCCACCATGCCATaGTTAAGCAACGCAGACAGG +
Preference number: 4 (lower is better)
Translates to: TLFTKGLLHYCLLTTTSRCSTMP*LSNADR
Trigger: CCTGTCTGCGTTGCTTAACCATGGCATGGTGGAGCA...TCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTGAAGAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp TCAGCTCAAAGCAGAACTAATACTTTTAATGGAATGGCTGGAGCTCTCATACTGGAGCTCGCGGACACATaGAGATGGGAAGAAGCCCCG +
Preference number: 4 (lower is better)
Translates to: SAQSRTNTFNGMAGALILELADT*RWEEAP
Trigger: CGGGGCTTCTTCCCATCTTCATGTGTCCGCGAGCTC...CAGTATGAGAGCTCCAGCCATTCCATTAAAAGTATTAGTTCTGCTTTGAGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR TCA 90 bp AGCCATGAATTCTTTTCATCTGAGTTGGCATCCGGTCAGCTGAGCATGGAACATGCTAGGTTGTGGAGCTaGGGACTTGATTGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: SHEFFSSELASGQLSMEHARLWS*GLDCLG
Trigger: ACCCAGACAATCAAGTCCTCAGCTCCACAACCTAGC...ATGTTCCATGCTCAGCTGACCGGATGCCAACTCAGATGAAAAGAATTCATGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR TCA 90 bp TGTGTAAAGACCATCAGAAAGGTGTCATTGAGGTTGCGGTATGGTGGCTTACACAGACTCCTTCCCATATaGCCAGGGCCCTCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: CVKTIRKVSLRLRYGGLHRLLPI*PGPSFS
Trigger: AGAAAAGGAGGGCCCTGGTCATATGGGAAGGAGTCT...GTGTAAGCCACCATACCGCAACCTCAATGACACCTTTCTGATGGTCTTTACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR TCA 90 bp CAAGGTTTACAACCCAATCGAGGAGAACAAGATCTGTGGTGTGCTCCACCATGCGCTGCATGGGTACCATaGTCCGCTCAATACACATTT +
Preference number: 4 (lower is better)
Translates to: QGLQPNRGEQDLWCAPPCAAWVP*SAQYTF
Trigger: AAATGTGTATTGAGCGGATCATGGTACCCATGCAGC...GCATGGTGGAGCACACCACAGATCTTGTTCTCCTCGATTGGGTTGTAAACCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp TTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCAGCCATGTGCAAGCAGTGAGATGCTTCAGGTaGCTGCTAACTCGGTTGGAT +
Preference number: 4 (lower is better)
Translates to: FEALGLVQSRQTPSHVQAVRCFR*LLTRLD
Trigger: ATCCAACCGAGTTAGCAGTCACCTGAAGCATCTCAC...TGCTTGCACATGGCTGGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp CAAGGTTTACAACCCAATCGAGGAGAACAAGATCTGTGGTGTGCTCCACCATGCGAGACATCCAAGTCTTaGGCAGCATTGAAGTTCCGT +
Preference number: 4 (lower is better)
Translates to: QGLQPNRGEQDLWCAPPCETSKS*AALKFR
Trigger: ACGGAACTTCAATGCTGCTCAAGACTTGGATGTCTC...GCATGGTGGAGCACACCACAGATCTTGTTCTCCTCGATTGGGTTGTAAACCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp TTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCAGCCATGTGCAAGCAACACGAAGCCTTTGGTaGCTCCATTGTCAATCAGCC +
Preference number: 4 (lower is better)
Translates to: FEALGLVQSRQTPSHVQATRSLW*LHCQSA
Trigger: GGCTGATTGACAATGGAGTCACCAAAGGCTTCGTGT...TGCTTGCACATGGCTGGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp CACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGACACTGTGGTTGGGTTTCGTGCCTTaGAGGTGTAGACAGCAAAAT +
Preference number: 4 (lower is better)
Translates to: HKRTLALLPSDHDQQTLWLGFVP*RCRQQN
Trigger: ATTTTGCTGTCTACACCTTCAAGGCACGAAACCCAA...CCACAGTGTCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp TCCCAGGATTTTAAGGCTAAATGTGCACTTGGAGGAACAGGGGCTGTAAGGCTAGAGTTTCTGATTGGCTaGCACGCTCAGCTCATTTGG +
Preference number: 4 (lower is better)
Translates to: SQDFKAKCALGGTGAVRLEFLIG*HAQLIW
Trigger: CCAAATGAGCTGAGCGTGTCAGCCAATCAGAAACTC...TAGCCTTACAGCCCCTGTTCCTCCAAGTGCACATTTAGCCTTAAAATCCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp ACACTCTTCACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGAAGGATCTTGAGTTTCTaGTTGGCTGACACGCTCAGC +
Preference number: 4 (lower is better)
Translates to: TLFTKGLLHYCLLTTTSRRILSF*LADTLS
Trigger: GCTGAGCGTGTCAGCCAATCAGAAACTCAAGATCCT...TCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTGAAGAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp ACACTCTTCACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGACCTTCGTCCCAGGGCTaGGACTCTCATAATCTACAT +
Preference number: 4 (lower is better)
Translates to: TLFTKGLLHYCLLTTTSRPSSQG*DSHNLH
Trigger: ATGTAGATTATGAGAGTCTCAGCCCTGGGACGAAGG...TCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTGAAGAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS-3UTR GCA 90 bp TCCCAGGATTTTAAGGCTAAATGTGCACTTGGAGGAACAGGGGCTGTAAGGCTATTCTCCAGCATCCTCTaGTCTGGATTTTCGGCAGAC +
Preference number: 4 (lower is better)
Translates to: SQDFKAKCALGGTGAVRLFSSIL*SGFSAD
Trigger: GTCTGCCGAAAATCCAGAGCAGAGGATGCTGGAGAA...TAGCCTTACAGCCCCTGTTCCTCCAAGTGCACATTTAGCCTTAAAATCCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp CAAGGTTTACAACCCAATCGAGGAGAACAAGATCTGTGGTGTGCTCCACCATGCAATGTTTGGTACCTGTaGCTGCTGCATGGGTACCAT +
Preference number: 4 (lower is better)
Translates to: QGLQPNRGEQDLWCAPPCNVWYL*LLHGYH
Trigger: ATGGTACCCATGCAGCAGGCACAGGTACCAAACATT...GCATGGTGGAGCACACCACAGATCTTGTTCTCCTCGATTGGGTTGTAAACCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp ACCAGACATCACAGACTGTGTAAAGACCATCAGAAAGGTGTCATTGAGGTTGCGGGTGTCCTCTCTCCATaGACACATCCCACATGCTCA +
Preference number: 4 (lower is better)
Translates to: TRHHRLCKDHQKGVIEVAGVLSP*THPTCS
Trigger: TGAGCATGTGGGATGTGTGCATGGAGAGAGGACACC...CGCAACCTCAATGACACCTTTCTGATGGTCTTTACACAGTCTGTGATGTCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp GCTTATCCCAATTCAAGTAAGTCACAGGTGTTATGTTGTCTGCATCTATGGATGAGGCATCGGAGTGGCTaGGGCGAGGATTGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: AYPNSSKSQVLCCLHLWMRHRSG*GEDCRA
Trigger: AGCCCTACAATCCTCGCCGCAGCCACTCCGATGCCT...CATCCATAGATGCAGACAACATAACACCTGTGACTTACTTGAATTGGGATAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp AGTGAGCATCAAGGTTTACAACCCAATCGAGGAGAACAAGATCTGTGGTGTGCTTGCCTTCTGCCTCACTaGCATCTGGCTCTGTACTTC +
Preference number: 4 (lower is better)
Translates to: SEHQGLQPNRGEQDLWCACLLPH*HLALYF
Trigger: GAAGTACAGAGCCAGATGGCAGTGAGGCAGAAGGCA...AGCACACCACAGATCTTGTTCTCCTCGATTGGGTTGTAAACCTTGATGCTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp GACTCCACGGTGTCTCCCGACTCCCAGGATTTTAAGGCTAAATGTGCACTTGGACACTGGGCTTCTGACTaGAAGTTTCTCCTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: DSTVSPDSQDFKAKCALGHWASD*KFLLSK
Trigger: TTTGGAAAGGAGAAACTTGCAGTCAGAAGCCCAGTG...TCCAAGTGCACATTTAGCCTTAAAATCCTGGGAGTCGGGAGACACCGTGGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp ACACTCTTCACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGAGGCAGAAGTCAAAAATaGCTCGAACCACTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: TLFTKGLLHYCLLTTTSRGRSQK*LEPLSQ
Trigger: CTGGCTCAGTGGTTCGAGCCATTTTTGACTTCTGCC...TCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTGAAGAGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR CCA 90 bp CTCATAGTCACTAAGTCATTTGCAAAGCCCCAGGGTCCATTTCAAATTCTAGAGGACCCCATAGGTCCCTaGCTCCTCCTCATCCTCATC +
Preference number: 4 (lower is better)
Translates to: LIVTKSFAKPQGPFQILEDPIGP*LLLILI
Trigger: GATGAGGATGAGGAGGAGCCAGGGACCTATGGGGTC...CTCTAGAATTTGAAATGGACCCTGGGGCTTTGCAAATGACTTAGTGACTATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR CCA 90 bp GACTCCACGGTGTCTCCCGACTCCCAGGATTTTAAGGCTAAATGTGCACTTGGACCAATCTCTCTGAGATaGAGTAAACACTGGACGTGT +
Preference number: 4 (lower is better)
Translates to: DSTVSPDSQDFKAKCALGPISLR*SKHWTC
Trigger: ACACGTCCAGTGTTTACTCCATCTCAGAGAGATTGG...TCCAAGTGCACATTTAGCCTTAAAATCCTGGGAGTCGGGAGACACCGTGGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR CCA 90 bp GACTCCACGGTGTCTCCCGACTCCCAGGATTTTAAGGCTAAATGTGCACTTGGACCGCAAGGACTGCATTaGTTAAAGGCACTTTATCTG +
Preference number: 4 (lower is better)
Translates to: DSTVSPDSQDFKAKCALGPQGLH*LKALYL
Trigger: CAGATAAAGTGCCTTTAACCAATGCAGTCCTTGCGG...TCCAAGTGCACATTTAGCCTTAAAATCCTGGGAGTCGGGAGACACCGTGGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp AGGTGTCCCAGGAGCTTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCCCGCAAGGACTGCATTaGTTAAAGGCACTTTATCTG +
Preference number: 4 (lower is better)
Translates to: RCPRSFEALGLVQSRQTPPQGLH*LKALYL
Trigger: CAGATAAAGTGCCTTTAACCAATGCAGTCCTTGCGG...GGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAAGCTCCTGGGACACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp AAAGCCCCAGGGTCCATTTCAAATTCTAGAGATTCTAGTGAGCATCAAGGTTTACCCTGGGCGTACTGGTaGAACTTGGGCAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: KAPGSISNSRDSSEHQGLPWAYW*NLGSSS
Trigger: GGATGAGCTGCCCAAGTTCCACCAGTACGCCCAGGG...TAAACCTTGATGCTCACTAGAATCTCTAGAATTTGAAATGGACCCTGGGGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp TCAGCTCAAAGCAGAACTAATACTTTTAATGGAATGGCTGGAGCTCTCATACTGCCCTGGGCGTACTGGTaGAACTTGGGCAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: SAQSRTNTFNGMAGALILPWAYW*NLGSSS
Trigger: GGATGAGCTGCCCAAGTTCCACCAGTACGCCCAGGG...CAGTATGAGAGCTCCAGCCATTCCATTAAAAGTATTAGTTCTGCTTTGAGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp GACTCCACGGTGTCTCCCGACTCCCAGGATTTTAAGGCTAAATGTGCACTTGGACTGCTGTGCTCTTCGTaGAAGATGGCAATAAGGTTT +
Preference number: 4 (lower is better)
Translates to: DSTVSPDSQDFKAKCALGLLCSS*KMAIRF
Trigger: AAACCTTATTGCCATCTTCCACGAAGAGCACAGCAG...TCCAAGTGCACATTTAGCCTTAAAATCCTGGGAGTCGGGAGACACCGTGGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp AGCCATGAATTCTTTTCATCTGAGTTGGCATCCGGTCAGCTGAGCATGGAACATGGCTTTCGAGCAGACTaGCGGTCAATGGTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: SHEFFSSELASGQLSMEHGFRAD*RSMVFL
Trigger: GAGGAAAACCATTGACCGCCAGTCTGCTCGAAAGCC...ATGTTCCATGCTCAGCTGACCGGATGCCAACTCAGATGAAAAGAATTCATGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp GCTTATCCCAATTCAAGTAAGTCACAGGTGTTATGTTGTCTGCATCTATGGATGGACTCTGTGGAGGAGTaGCTACCCACGGAGGCATCG +
Preference number: 4 (lower is better)
Translates to: AYPNSSKSQVLCCLHLWMDSVEE*LPTEAS
Trigger: CGATGCCTCCGTGGGTAGCCACTCCTCCACAGAGTC...CATCCATAGATGCAGACAACATAACACCTGTGACTTACTTGAATTGGGATAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp AGGTGTCCCAGGAGCTTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCTTGGTCACATTCTTTTaGCGGAGGAGATGCATCTTG +
Preference number: 4 (lower is better)
Translates to: RCPRSFEALGLVQSRQTPLVTFF*RRRCIL
Trigger: CAAGATGCATCTCCTCCGCCAAAAGAATGTGACCAA...GGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAAGCTCCTGGGACACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp GACTCCACGGTGTCTCCCGACTCCCAGGATTTTAAGGCTAAATGTGCACTTGGAGTAGCCAACTATTTCTaGATGCCTGAAGTTCCGGTA +
Preference number: 4 (lower is better)
Translates to: DSTVSPDSQDFKAKCALGVANYF*MPEVPV
Trigger: TACCGGAACTTCAGGCATCCAGAAATAGTTGGCTAC...TCCAAGTGCACATTTAGCCTTAAAATCCTGGGAGTCGGGAGACACCGTGGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp CACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGACACTGTGGGTAGCCAACTATTTCTaGATGCCTGAAGTTCCGGTA +
Preference number: 4 (lower is better)
Translates to: HKRTLALLPSDHDQQTLWVANYF*MPEVPV
Trigger: TACCGGAACTTCAGGCATCCAGAAATAGTTGGCTAC...CCACAGTGTCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp AGGTGTCCCAGGAGCTTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCGTAGCCAACTATTTCTaGATGCCTGAAGTTCCGGTA +
Preference number: 4 (lower is better)
Translates to: RCPRSFEALGLVQSRQTPVANYF*MPEVPV
Trigger: TACCGGAACTTCAGGCATCCAGAAATAGTTGGCTAC...GGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAAGCTCCTGGGACACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp GAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACTGTCTATTTTGCGGATATAATTaGAGGGAACGTAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: EHGATPNAVQHNHYQHCLFCGYN*RERSPS
Trigger: AGAAGGGCTACGTTCCCTCCAATTATATCCGCAAAA...TAGACAGTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp CTTCCTGCATACATAGGACACTGGGCTTCTGACTGCAAGTTTCTCCTTTCCAAATGCTCCACCATGCCATaGTTAAGCAACGCAGACAGG +
Preference number: 4 (lower is better)
Translates to: LPAYIGHWASDCKFLLSKCSTMP*LSNADR
Trigger: CCTGTCTGCGTTGCTTAACCATGGCATGGTGGAGCA...TTTGGAAAGGAGAAACTTGCAGTCAGAAGCCCAGTGTCCTATGTATGCAGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp ACACTCTTCACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGAGGAGAACAAGATCTGTaGTGTGCTCCACCATGCCAT +
Preference number: 4 (lower is better)
Translates to: TLFTKGLLHYCLLTTTSRGEQDL*CAPPCH
Trigger: ATGGCATGGTGGAGCACACCACAGATCTTGTTCTCC...TCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTGAAGAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp AAAGCCCCAGGGTCCATTTCAAATTCTAGAGATTCTAGTGAGCATCAAGGTTTAGCTGAGCATGGAACATaGGGCCACCCCAAACGCCGT +
Preference number: 4 (lower is better)
Translates to: KAPGSISNSRDSSEHQGLAEHGT*GHPKRR
Trigger: ACGGCGTTTGGGGTGGCCCCATGTTCCATGCTCAGC...TAAACCTTGATGCTCACTAGAATCTCTAGAATTTGAAATGGACCCTGGGGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp TCAGCTCAAAGCAGAACTAATACTTTTAATGGAATGGCTGGAGCTCTCATACTGGCTGAGCATGGAACATaGGGCCACCCCAAACGCCGT +
Preference number: 4 (lower is better)
Translates to: SAQSRTNTFNGMAGALILAEHGT*GHPKRR
Trigger: ACGGCGTTTGGGGTGGCCCCATGTTCCATGCTCAGC...CAGTATGAGAGCTCCAGCCATTCCATTAAAAGTATTAGTTCTGCTTTGAGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp TGTGGTGTGCTCCACCATGCCATGGTTAAGCAACGCAGACAGGGCCTGTGTCTCAAGCTACTTCTGGAATaGCTTATCCCAATTCAAGTA +
Preference number: 4 (lower is better)
Translates to: CGVLHHAMVKQRRQGLCLKLLLE*LIPIQV
Trigger: TACTTGAATTGGGATAAGCCATTCCAGAAGTAGCTT...GAGACACAGGCCCTGTCTGCGTTGCTTAACCATGGCATGGTGGAGCACACCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp AGTGAGCATCAAGGTTTACAACCCAATCGAGGAGAACAAGATCTGTGGTGTGCTGACCAGCAGACACTGTaGATGTTAGGACTCCACGGT +
Preference number: 4 (lower is better)
Translates to: SEHQGLQPNRGEQDLWCADQQTL*MLGLHG
Trigger: ACCGTGGAGTCCTAACATCCACAGTGTCTGCTGGTC...AGCACACCACAGATCTTGTTCTCCTCGATTGGGTTGTAAACCTTGATGCTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp AGTGAGCATCAAGGTTTACAACCCAATCGAGGAGAACAAGATCTGTGGTGTGCTCTCCTTGTTCTCCCCTaGTACACTGAGTCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: SEHQGLQPNRGEQDLWCALLVLP*YTESAD
Trigger: GTCTGCAGACTCAGTGTACCAGGGGAGAACAAGGAG...AGCACACCACAGATCTTGTTCTCCTCGATTGGGTTGTAAACCTTGATGCTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS-3UTR TCA 90 bp ACCAGACATCACAGACTGTGTAAAGACCATCAGAAAGGTGTCATTGAGGTTGCGAATGGCTCGAACCACTaGGCCAGCCTCCATGTTTTA +
Preference number: 4 (lower is better)
Translates to: TRHHRLCKDHQKGVIEVANGSNH*ASLHVL
Trigger: TAAAACATGGAGGCTGGCTCAGTGGTTCGAGCCATT...CGCAACCTCAATGACACCTTTCTGATGGTCTTTACACAGTCTGTGATGTCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR TCA 90 bp TGTGTAAAGACCATCAGAAAGGTGTCATTGAGGTTGCGGTATGGTGGCTTACACGCTTCTCCTCCAGCATaGGGTTTAGCTCTTCTTGAG +
Preference number: 4 (lower is better)
Translates to: CVKTIRKVSLRLRYGGLHASPPA*GLALLE
Trigger: CTCAAGAAGAGCTAAACCTCATGCTGGAGGAGAAGC...GTGTAAGCCACCATACCGCAACCTCAATGACACCTTTCTGATGGTCTTTACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR TCA 90 bp AGCCATGAATTCTTTTCATCTGAGTTGGCATCCGGTCAGCTGAGCATGGAACATTCTGCCAAGGAGTCCTaGAGATGCTTCTGGATCTTC +
Preference number: 4 (lower is better)
Translates to: SHEFFSSELASGQLSMEHSAKES*RCFWIF
Trigger: GAAGATCCAGAAGCATCTTCAGGACTCCTTGGCAGA...ATGTTCCATGCTCAGCTGACCGGATGCCAACTCAGATGAAAAGAATTCATGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp TGTGTAAAGACCATCAGAAAGGTGTCATTGAGGTTGCGGTATGGTGGCTTACACGTGAGATGCTTCAGGTaGCTGCTAACTCGGTTGGAT +
Preference number: 4 (lower is better)
Translates to: CVKTIRKVSLRLRYGGLHVRCFR*LLTRLD
Trigger: ATCCAACCGAGTTAGCAGTCACCTGAAGCATCTCAC...GTGTAAGCCACCATACCGCAACCTCAATGACACCTTTCTGATGGTCTTTACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp TGTGTAAAGACCATCAGAAAGGTGTCATTGAGGTTGCGGTATGGTGGCTTACACCCTTTGACGAGGTCTTaGCTTTGCCCATTTCGTCCT +
Preference number: 4 (lower is better)
Translates to: CVKTIRKVSLRLRYGGLHPLTRS*LCPFRP
Trigger: AGGACGAAATGGGCAAAGTCAAGACCTCGTCAAAGG...GTGTAAGCCACCATACCGCAACCTCAATGACACCTTTCTGATGGTCTTTACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp AGTGAGCATCAAGGTTTACAACCCAATCGAGGAGAACAAGATCTGTGGTGTGCTCCTTTGACGAGGTCTTaGCTTTGCCCATTTCGTCCT +
Preference number: 4 (lower is better)
Translates to: SEHQGLQPNRGEQDLWCAPLTRS*LCPFRP
Trigger: AGGACGAAATGGGCAAAGTCAAGACCTCGTCAAAGG...AGCACACCACAGATCTTGTTCTCCTCGATTGGGTTGTAAACCTTGATGCTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp ACCAGACATCACAGACTGTGTAAAGACCATCAGAAAGGTGTCATTGAGGTTGCGAGGATCTTGAGTTTCTaGTTGGCTGACACGCTCAGC +
Preference number: 4 (lower is better)
Translates to: TRHHRLCKDHQKGVIEVARILSF*LADTLS
Trigger: GCTGAGCGTGTCAGCCAATCAGAAACTCAAGATCCT...CGCAACCTCAATGACACCTTTCTGATGGTCTTTACACAGTCTGTGATGTCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp AGTGAGCATCAAGGTTTACAACCCAATCGAGGAGAACAAGATCTGTGGTGTGCTAGGACACTGGGCTTCTaGCTGCAAGTTTCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: SEHQGLQPNRGEQDLWCARTLGF*LQVSPF
Trigger: GAAAGGAGAAACTTGCAGTCAGAAGCCCAGTGTCCT...AGCACACCACAGATCTTGTTCTCCTCGATTGGGTTGTAAACCTTGATGCTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp TCCCAGGATTTTAAGGCTAAATGTGCACTTGGAGGAACAGGGGCTGTAAGGCTACTAGTCGGAGCGCAGTaGGATGTGGAGTTATTTCAA +
Preference number: 4 (lower is better)
Translates to: SQDFKAKCALGGTGAVRLLVGAQ*DVELFQ
Trigger: TTGAAATAACTCCACATCTCACTGCGCTCCGACTAG...TAGCCTTACAGCCCCTGTTCCTCCAAGTGCACATTTAGCCTTAAAATCCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS-3UTR TCA 90 bp AGGTGTCCCAGGAGCTTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCTCCAAATTCTCCATTTaGTGGAGAGAATCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: RCPRSFEALGLVQSRQTPSKFSI*WRESVP
Trigger: AGGGACAGATTCTCTCCATCAAATGGAGAATTTGGA...GGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAAGCTCCTGGGACACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS-3UTR GCA 90 bp TGTGTAAAGACCATCAGAAAGGTGTCATTGAGGTTGCGGTATGGTGGCTTACACCTTTCCGGCAGCTCCTaGTCGGTGATTAACTTTGAG +
Preference number: 4 (lower is better)
Translates to: CVKTIRKVSLRLRYGGLHLSGSS*SVINFE
Trigger: CTCAAAGTTAATCACCGAGCAGGAGCTGCCGGAAAG...GTGTAAGCCACCATACCGCAACCTCAATGACACCTTTCTGATGGTCTTTACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR GCA 90 bp CTTCCTGCATACATAGGACACTGGGCTTCTGACTGCAAGTTTCTCCTTTCCAAATTCTCCAGCATCCTCTaGTCTGGATTTTCGGCAGAC +
Preference number: 4 (lower is better)
Translates to: LPAYIGHWASDCKFLLSKFSSIL*SGFSAD
Trigger: GTCTGCCGAAAATCCAGAGCAGAGGATGCTGGAGAA...TTTGGAAAGGAGAAACTTGCAGTCAGAAGCCCAGTGTCCTATGTATGCAGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp ACCAGACATCACAGACTGTGTAAAGACCATCAGAAAGGTGTCATTGAGGTTGCGTTTGGTACCTGTGCCTaGTGCATGGGTACCATGATC +
Preference number: 4 (lower is better)
Translates to: TRHHRLCKDHQKGVIEVAFGTCA*CMGTMI
Trigger: GATCATGGTACCCATGCAGCAGGCACAGGTACCAAA...CGCAACCTCAATGACACCTTTCTGATGGTCTTTACACAGTCTGTGATGTCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp ACACTCTTCACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGAAATGTTTGGTACCTGTaGCTGCTGCATGGGTACCAT +
Preference number: 4 (lower is better)
Translates to: TLFTKGLLHYCLLTTTSRNVWYL*LLHGYH
Trigger: ATGGTACCCATGCAGCAGGCACAGGTACCAAACATT...TCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTGAAGAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp CATTCCAAGATAGGCTTCATAGCTGGGGAAGATCTTAAGATTCTTGGTCTAAGGCACCACTTTCACACATaGGGACTCCCGGATGTGCTG +
Preference number: 4 (lower is better)
Translates to: HSKIGFIAGEDLKILGLRHHFHT*GLPDVL
Trigger: CAGCACATCCGGGAGTCCGCATGTGTGAAAGTGGTG...CCTTAGACCAAGAATCTTAAGATCTTCCCCAGCTATGAAGCCTATCTTGGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp GCTTATCCCAATTCAAGTAAGTCACAGGTGTTATGTTGTCTGCATCTATGGATGTGCACCCTCTCAAACTaGTCCAGGTCCCGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: AYPNSSKSQVLCCLHLWMCTLSN*SRSRCP
Trigger: AGGACACCGGGACCTGGAGCAGTTTGAGAGGGTGCA...CATCCATAGATGCAGACAACATAACACCTGTGACTTACTTGAATTGGGATAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp AGCCATGAATTCTTTTCATCTGAGTTGGCATCCGGTCAGCTGAGCATGGAACATTGCAGAACTCTGCTGTaGTCTTCGTGGAAGATGGCA +
Preference number: 4 (lower is better)
Translates to: SHEFFSSELASGQLSMEHCRTLL*SSWKMA
Trigger: TGCCATCTTCCACGAAGAGCACAGCAGAGTTCTGCA...ATGTTCCATGCTCAGCTGACCGGATGCCAACTCAGATGAAAAGAATTCATGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp TGTGTAAAGACCATCAGAAAGGTGTCATTGAGGTTGCGGTATGGTGGCTTACACGTTGCTGCAGAACTCTaGTGTGCTCTTCGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: CVKTIRKVSLRLRYGGLHVAAEL*CALRGR
Trigger: TCTTCCACGAAGAGCACAGCAGAGTTCTGCAGCAAC...GTGTAAGCCACCATACCGCAACCTCAATGACACCTTTCTGATGGTCTTTACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp ACACTCTTCACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGAAAAACCTGGAGTTGCTaGAGAACTCTGCTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: TLFTKGLLHYCLLTTTSRKTWSC*RTLLCS
Trigger: AGAGCACAGCAGAGTTCTGCAGCAACTCCAGGTTTT...TCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTGAAGAGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp TTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCAGCCATGTGCAAGCAGTAAAAACCTGGAGTTaGTGCAGAACTCTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: FEALGLVQSRQTPSHVQAVKTWS*CRTLLC
Trigger: GCACAGCAGAGTTCTGCAGCAACTCCAGGTTTTTAC...TGCTTGCACATGGCTGGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp AGCCATGAATTCTTTTCATCTGAGTTGGCATCCGGTCAGCTGAGCATGGAACATTTTTGGCGGAGGAGATaGATCTTGAGGCTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: SHEFFSSELASGQLSMEHFWRRR*ILRLLL
Trigger: CAGAAGCAGCCTCAAGATGCATCTCCTCCGCCAAAA...ATGTTCCATGCTCAGCTGACCGGATGCCAACTCAGATGAAAAGAATTCATGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp AGCCATGAATTCTTTTCATCTGAGTTGGCATCCGGTCAGCTGAGCATGGAACATGGCGTGGCAGTGGGTTaGTTTACATCTCTAGCTACA +
Preference number: 4 (lower is better)
Translates to: SHEFFSSELASGQLSMEHGVAVG*FTSLAT
Trigger: TGTAGCTAGAGATGTAAAGCAACCCACTGCCACGCC...ATGTTCCATGCTCAGCTGACCGGATGCCAACTCAGATGAAAAGAATTCATGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp ACCAGACATCACAGACTGTGTAAAGACCATCAGAAAGGTGTCATTGAGGTTGCGGGCGTGGCAGTGGGTTaGTTTACATCTCTAGCTACA +
Preference number: 4 (lower is better)
Translates to: TRHHRLCKDHQKGVIEVAGVAVG*FTSLAT
Trigger: TGTAGCTAGAGATGTAAAGCAACCCACTGCCACGCC...CGCAACCTCAATGACACCTTTCTGATGGTCTTTACACAGTCTGTGATGTCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp GCTTATCCCAATTCAAGTAAGTCACAGGTGTTATGTTGTCTGCATCTATGGATGGACCTGGTTGCCTTCTaGCTCACTGCCATCTGGCTC +
Preference number: 4 (lower is better)
Translates to: AYPNSSKSQVLCCLHLWMDLVAF*LTAIWL
Trigger: GAGCCAGATGGCAGTGAGGCAGAAGGCAACCAGGTC...CATCCATAGATGCAGACAACATAACACCTGTGACTTACTTGAATTGGGATAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp ACACTCTTCACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGACAAAATAGACCTGGTTaGCTTCTGCCTCACTGCCAT +
Preference number: 4 (lower is better)
Translates to: TLFTKGLLHYCLLTTTSRQNRPG*LLPHCH
Trigger: ATGGCAGTGAGGCAGAAGGCAACCAGGTCTATTTTG...TCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTGAAGAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp TTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCAGCCATGTGCAAGCACAAAATAGACCTGGTTaGCTTCTGCCTCACTGCCAT +
Preference number: 4 (lower is better)
Translates to: FEALGLVQSRQTPSHVQAQNRPG*LLPHCH
Trigger: ATGGCAGTGAGGCAGAAGGCAACCAGGTCTATTTTG...TGCTTGCACATGGCTGGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp TTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCAGCCATGTGCAAGCACTCATTTGGGTTTCGTaGCTTGAAGGTGTAGACAGC +
Preference number: 4 (lower is better)
Translates to: FEALGLVQSRQTPSHVQALIWVS*LEGVDS
Trigger: GCTGTCTACACCTTCAAGGCACGAAACCCAAATGAG...TGCTTGCACATGGCTGGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp ACACTCTTCACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGACTCATTTGGGTTTCGTaGCTTGAAGGTGTAGACAGC +
Preference number: 4 (lower is better)
Translates to: TLFTKGLLHYCLLTTTSRLIWVS*LEGVDS
Trigger: GCTGTCTACACCTTCAAGGCACGAAACCCAAATGAG...TCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTGAAGAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp GACTCCACGGTGTCTCCCGACTCCCAGGATTTTAAGGCTAAATGTGCACTTGGAAGGTGTACTCGGTTTTaGGGATATAATTGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: DSTVSPDSQDFKAKCALGRCTRF*GYNWRE
Trigger: TTCCCTCCAATTATATCCGCAAAACCGAGTACACCT...TCCAAGTGCACATTTAGCCTTAAAATCCTGGGAGTCGGGAGACACCGTGGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp CACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGACACTGTGGAGGTGTACTCGGTTTTaGGGATATAATTGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: HKRTLALLPSDHDQQTLWRCTRF*GYNWRE
Trigger: TTCCCTCCAATTATATCCGCAAAACCGAGTACACCT...CCACAGTGTCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp ACACTCTTCACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGAACAAGATCTGTGGTGTaGTCCACCATGCCATGGTTA +
Preference number: 4 (lower is better)
Translates to: TLFTKGLLHYCLLTTTSRTRSVV*STMPWL
Trigger: TAACCATGGCATGGTGGAGCACACCACAGATCTTGT...TCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTGAAGAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp TCAGCTCAAAGCAGAACTAATACTTTTAATGGAATGGCTGGAGCTCTCATACTGAAGTTTCCGGGATCCTaGCAAGGCTGCCTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: SAQSRTNTFNGMAGALILKFPGS*QGCLPG
Trigger: CCCAGGAAGGCAGCCTTGCCAGGATCCCGGAAACTT...CAGTATGAGAGCTCCAGCCATTCCATTAAAAGTATTAGTTCTGCTTTGAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR CCA 90 bp AGCCATGAATTCTTTTCATCTGAGTTGGCATCCGGTCAGCTGAGCATGGAACATATGTGGGAGAGTCTGTaGCAAGAGGCATTTCCCACT +
Preference number: 4 (lower is better)
Translates to: SHEFFSSELASGQLSMEHMWESL*QEAFPT
Trigger: AGTGGGAAATGCCTCTTGCCACAGACTCTCCCACAT...ATGTTCCATGCTCAGCTGACCGGATGCCAACTCAGATGAAAAGAATTCATGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR CCA 90 bp AGCCATGAATTCTTTTCATCTGAGTTGGCATCCGGTCAGCTGAGCATGGAACATCAGCATCCTCTGCTCTaGATTTTCGGCAGACACAGA +
Preference number: 4 (lower is better)
Translates to: SHEFFSSELASGQLSMEHQHPLL*IFGRHR
Trigger: TCTGTGTCTGCCGAAAATCCAGAGCAGAGGATGCTG...ATGTTCCATGCTCAGCTGACCGGATGCCAACTCAGATGAAAAGAATTCATGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp ACACTCTTCACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGATTTCAAGCAGCGCAATaGCCTCATCATGATTCTGGC +
Preference number: 4 (lower is better)
Translates to: TLFTKGLLHYCLLTTTSRFQAAQ*PHHDSG
Trigger: GCCAGAATCATGATGAGGCCATTGCGCTGCTTGAAA...TCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTGAAGAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp GATTTTAAGGCTAAATGTGCACTTGGAGGAACAGGGGCTGTAAGGCTATTTCTTCGTACTGGTGGAACTTaGGCAGCTCATCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: DFKAKCALGGTGAVRLFLRTGGT*AAHPAA
Trigger: AGCTGCTGGATGAGCTGCCCAAGTTCCACCAGTACG...AAGAAATAGCCTTACAGCCCCTGTTCCTCCAAGTGCACATTTAGCCTTAAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp TGTGTAAAGACCATCAGAAAGGTGTCATTGAGGTTGCGGTATGGTGGCTTACACTGGCTTCTTGGTAGCTaGAAGAGACTCCGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: CVKTIRKVSLRLRYGGLHWLLGS*KRLREE
Trigger: TTCTTCCCGGAGTCTCTTCCAGCTACCAAGAAGCCA...GTGTAAGCCACCATACCGCAACCTCAATGACACCTTTCTGATGGTCTTTACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp ACACTCTTCACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGAGCACTGAGAGTTCCTTaGTCACATTCTTTTGGCGGA +
Preference number: 4 (lower is better)
Translates to: TLFTKGLLHYCLLTTTSRALRVP*SHSFGG
Trigger: TCCGCCAAAAGAATGTGACCAAGGAACTCTCAGTGC...TCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTGAAGAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp CTTCCTGCATACATAGGACACTGGGCTTCTGACTGCAAGTTTCTCCTTTCCAAACACGCTCAGCTCATTTaGGTTTCGTGCCTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: LPAYIGHWASDCKFLLSKHAQLI*VSCLEG
Trigger: ACCTTCAAGGCACGAAACCCAAATGAGCTGAGCGTG...TTTGGAAAGGAGAAACTTGCAGTCAGAAGCCCAGTGTCCTATGTATGCAGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp ACCAGACATCACAGACTGTGTAAAGACCATCAGAAAGGTGTCATTGAGGTTGCGCACGCTCAGCTCATTTaGGTTTCGTGCCTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: TRHHRLCKDHQKGVIEVAHAQLI*VSCLEG
Trigger: ACCTTCAAGGCACGAAACCCAAATGAGCTGAGCGTG...CGCAACCTCAATGACACCTTTCTGATGGTCTTTACACAGTCTGTGATGTCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp TGTGTAAAGACCATCAGAAAGGTGTCATTGAGGTTGCGGTATGGTGGCTTACACGGAGAACAAGATCTGTaGTGTGCTCCACCATGCCAT +
Preference number: 4 (lower is better)
Translates to: CVKTIRKVSLRLRYGGLHGEQDL*CAPPCH
Trigger: ATGGCATGGTGGAGCACACCACAGATCTTGTTCTCC...GTGTAAGCCACCATACCGCAACCTCAATGACACCTTTCTGATGGTCTTTACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp AGTGAGCATCAAGGTTTACAACCCAATCGAGGAGAACAAGATCTGTGGTGTGCTGGAGAACAAGATCTGTaGTGTGCTCCACCATGCCAT +
Preference number: 4 (lower is better)
Translates to: SEHQGLQPNRGEQDLWCAGEQDL*CAPPCH
Trigger: ATGGCATGGTGGAGCACACCACAGATCTTGTTCTCC...AGCACACCACAGATCTTGTTCTCCTCGATTGGGTTGTAAACCTTGATGCTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp AGCCATGAATTCTTTTCATCTGAGTTGGCATCCGGTCAGCTGAGCATGGAACATTACTTTCACAGAACTTaGGATCCTCGAGGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: SHEFFSSELASGQLSMEHYFHRT*DPRGSL
Trigger: CAGAGACCCTCGAGGATCTCAAGTTCTGTGAAAGTA...ATGTTCCATGCTCAGCTGACCGGATGCCAACTCAGATGAAAAGAATTCATGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR TCA 90 bp AGTGAGCATCAAGGTTTACAACCCAATCGAGGAGAACAAGATCTGTGGTGTGCTGCTGCATGGGTACCATaGTCCGCTCAATACACATTT +
Preference number: 4 (lower is better)
Translates to: SEHQGLQPNRGEQDLWCAAAWVP*SAQYTF
Trigger: AAATGTGTATTGAGCGGATCATGGTACCCATGCAGC...AGCACACCACAGATCTTGTTCTCCTCGATTGGGTTGTAAACCTTGATGCTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp CATTCCAAGATAGGCTTCATAGCTGGGGAAGATCTTAAGATTCTTGGTCTAAGGTCAAGCTCATCCCGGTaGCCAAGAAACACAGGTCCT +
Preference number: 4 (lower is better)
Translates to: HSKIGFIAGEDLKILGLRSSSSR*PRNTGP
Trigger: AGGACCTGTGTTTCTTGGTCACCGGGATGAGCTTGA...CCTTAGACCAAGAATCTTAAGATCTTCCCCAGCTATGAAGCCTATCTTGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp CTCATAGTCACTAAGTCATTTGCAAAGCCCCAGGGTCCATTTCAAATTCTAGAGGATTTAAGGGGGAGATaGCAAGCCGCTCTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: LIVTKSFAKPQGPFQILEDLRGR*QAALSS
Trigger: AGAGGACAGAGCGGCTTGTCATCTCCCCCTTAAATC...CTCTAGAATTTGAAATGGACCCTGGGGCTTTGCAAATGACTTAGTGACTATGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp TGTGTAAAGACCATCAGAAAGGTGTCATTGAGGTTGCGGTATGGTGGCTTACACGAGACATCCAAGTCTTaGGCAGCATTGAAGTTCCGT +
Preference number: 4 (lower is better)
Translates to: CVKTIRKVSLRLRYGGLHETSKS*AALKFR
Trigger: ACGGAACTTCAATGCTGCTCAAGACTTGGATGTCTC...GTGTAAGCCACCATACCGCAACCTCAATGACACCTTTCTGATGGTCTTTACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp ACCAGACATCACAGACTGTGTAAAGACCATCAGAAAGGTGTCATTGAGGTTGCGGTCACCTTCCAAAAGTaGGACATCCAAGTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: TRHHRLCKDHQKGVIEVAVTFQK*DIQVLS
Trigger: GCTCAAGACTTGGATGTCTCACTTTTGGAAGGTGAC...CGCAACCTCAATGACACCTTTCTGATGGTCTTTACACAGTCTGTGATGTCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp CTTCCTGCATACATAGGACACTGGGCTTCTGACTGCAAGTTTCTCCTTTCCAAATTCTTGCACATCCTTTaGCGAGGTCTTGACTTTGCC +
Preference number: 4 (lower is better)
Translates to: LPAYIGHWASDCKFLLSKFLHIL*RGLDFA
Trigger: GGCAAAGTCAAGACCTCGTCAAAGGATGTGCAAGAA...TTTGGAAAGGAGAAACTTGCAGTCAGAAGCCCAGTGTCCTATGTATGCAGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp AGTGAGCATCAAGGTTTACAACCCAATCGAGGAGAACAAGATCTGTGGTGTGCTTTCTTGCACATCCTTTaGCGAGGTCTTGACTTTGCC +
Preference number: 4 (lower is better)
Translates to: SEHQGLQPNRGEQDLWCAFLHIL*RGLDFA
Trigger: GGCAAAGTCAAGACCTCGTCAAAGGATGTGCAAGAA...AGCACACCACAGATCTTGTTCTCCTCGATTGGGTTGTAAACCTTGATGCTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp GATTTTAAGGCTAAATGTGCACTTGGAGGAACAGGGGCTGTAAGGCTATTTCTTTGCATTACTGCCTTCTaGCCACGACCAGCAGACACT +
Preference number: 4 (lower is better)
Translates to: DFKAKCALGGTGAVRLFLCITAF*PRPADT
Trigger: AGTGTCTGCTGGTCGTGGTCAGAAGGCAGTAATGCA...AAGAAATAGCCTTACAGCCCCTGTTCCTCCAAGTGCACATTTAGCCTTAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp AGGTGTCCCAGGAGCTTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCAAATTCATCCACCACTaGCAGCACCTCAATAATATC +
Preference number: 4 (lower is better)
Translates to: RCPRSFEALGLVQSRQTPKFIHH*QHLNNI
Trigger: GATATTATTGAGGTGCTGGCAGTGGTGGATGAATTT...GGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAAGCTCCTGGGACACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR GCA 90 bp GCTTATCCCAATTCAAGTAAGTCACAGGTGTTATGTTGTCTGCATCTATGGATGCACCACTTTCACACATaGGGACTCCCGGATGTGCTG +
Preference number: 4 (lower is better)
Translates to: AYPNSSKSQVLCCLHLWMHHFHT*GLPDVL
Trigger: CAGCACATCCGGGAGTCCGCATGTGTGAAAGTGGTG...CATCCATAGATGCAGACAACATAACACCTGTGACTTACTTGAATTGGGATAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp CTTCCTGCATACATAGGACACTGGGCTTCTGACTGCAAGTTTCTCCTTTCCAAAAAAACCTGGAGTTGCTaGAGAACTCTGCTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: LPAYIGHWASDCKFLLSKKTWSC*RTLLCS
Trigger: AGAGCACAGCAGAGTTCTGCAGCAACTCCAGGTTTT...TTTGGAAAGGAGAAACTTGCAGTCAGAAGCCCAGTGTCCTATGTATGCAGGAAG
47% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp AGTGAGCATCAAGGTTTACAACCCAATCGAGGAGAACAAGATCTGTGGTGTGCTGTAAAAACCTGGAGTTaGTGCAGAACTCTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: SEHQGLQPNRGEQDLWCAVKTWS*CRTLLC
Trigger: GCACAGCAGAGTTCTGCAGCAACTCCAGGTTTTTAC...AGCACACCACAGATCTTGTTCTCCTCGATTGGGTTGTAAACCTTGATGCTCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp GATTTTAAGGCTAAATGTGCACTTGGAGGAACAGGGGCTGTAAGGCTATTTCTTAGCCTGGGCTGTTCTTaGACATCCTTTGACGAGGTC +
Preference number: 4 (lower is better)
Translates to: DFKAKCALGGTGAVRLFLSLGCS*TSFDEV
Trigger: GACCTCGTCAAAGGATGTGCAAGAACAGCCCAGGCT...AAGAAATAGCCTTACAGCCCCTGTTCCTCCAAGTGCACATTTAGCCTTAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp CATTCCAAGATAGGCTTCATAGCTGGGGAAGATCTTAAGATTCTTGGTCTAAGGAGCCTGGGCTGTTCTTaGACATCCTTTGACGAGGTC +
Preference number: 4 (lower is better)
Translates to: HSKIGFIAGEDLKILGLRSLGCS*TSFDEV
Trigger: GACCTCGTCAAAGGATGTGCAAGAACAGCCCAGGCT...CCTTAGACCAAGAATCTTAAGATCTTCCCCAGCTATGAAGCCTATCTTGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp CTTCCTGCATACATAGGACACTGGGCTTCTGACTGCAAGTTTCTCCTTTCCAAACTCATTTGGGTTTCGTaGCTTGAAGGTGTAGACAGC +
Preference number: 4 (lower is better)
Translates to: LPAYIGHWASDCKFLLSKLIWVS*LEGVDS
Trigger: GCTGTCTACACCTTCAAGGCACGAAACCCAAATGAG...TTTGGAAAGGAGAAACTTGCAGTCAGAAGCCCAGTGTCCTATGTATGCAGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp AGCATGGAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACAACGCAGTTGAATTTTaGATAACTAATCTGGGAATG +
Preference number: 4 (lower is better)
Translates to: SMEHGATPNAVQHNHYQHNAVEF*ITNLGM
Trigger: CATTCCCAGATTAGTTATGCAAAATTCAACTGCGTT...GTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTCCATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp CATTCCAAGATAGGCTTCATAGCTGGGGAAGATCTTAAGATTCTTGGTCTAAGGGGACTCTTGCATTACTaGCTTCTGACCACGACCAGC +
Preference number: 4 (lower is better)
Translates to: HSKIGFIAGEDLKILGLRGLLHY*LLTTTS
Trigger: GCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCC...CCTTAGACCAAGAATCTTAAGATCTTCCCCAGCTATGAAGCCTATCTTGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp CATTCCAAGATAGGCTTCATAGCTGGGGAAGATCTTAAGATTCTTGGTCTAAGGAGACACTCTTCTCGTTaGTCTAGTCGGAGCGCAGTG +
Preference number: 4 (lower is better)
Translates to: HSKIGFIAGEDLKILGLRRHSSR*SSRSAV
Trigger: CACTGCGCTCCGACTAGAGCAACGAGAAGAGTGTCT...CCTTAGACCAAGAATCTTAAGATCTTCCCCAGCTATGAAGCCTATCTTGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS-3UTR CCA 90 bp CAAGGTTTACAACCCAATCGAGGAGAACAAGATCTGTGGTGTGCTCCACCATGCCTCAAAATCAATGTTTaGTACCTGTGCCTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: QGLQPNRGEQDLWCAPPCLKINV*YLCLLH
Trigger: ATGCAGCAGGCACAGGTACCAAACATTGATTTTGAG...GCATGGTGGAGCACACCACAGATCTTGTTCTCCTCGATTGGGTTGTAAACCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp AGTGAGCATCAAGGTTTACAACCCAATCGAGGAGAACAAGATCTGTGGTGTGCTTTCTGTACCAGCTTATaGGGCCCTGTAAACATGCTC +
Preference number: 4 (lower is better)
Translates to: SEHQGLQPNRGEQDLWCAFCTSL*GPVNML
Trigger: GAGCATGTTTACAGGGCCCCATAAGCTGGTACAGAA...AGCACACCACAGATCTTGTTCTCCTCGATTGGGTTGTAAACCTTGATGCTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp AGCCATGAATTCTTTTCATCTGAGTTGGCATCCGGTCAGCTGAGCATGGAACATTTCTGTACCAGCTTATaGGGCCCTGTAAACATGCTC +
Preference number: 4 (lower is better)
Translates to: SHEFFSSELASGQLSMEHFCTSL*GPVNML
Trigger: GAGCATGTTTACAGGGCCCCATAAGCTGGTACAGAA...ATGTTCCATGCTCAGCTGACCGGATGCCAACTCAGATGAAAAGAATTCATGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp GATTTTAAGGCTAAATGTGCACTTGGAGGAACAGGGGCTGTAAGGCTATTTCTTGGCTTTCGAGCAGACTaGCGGTCAATGGTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: DFKAKCALGGTGAVRLFLGFRAD*RSMVFL
Trigger: GAGGAAAACCATTGACCGCCAGTCTGCTCGAAAGCC...AAGAAATAGCCTTACAGCCCCTGTTCCTCCAAGTGCACATTTAGCCTTAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp AAAGCCCCAGGGTCCATTTCAAATTCTAGAGATTCTAGTGAGCATCAAGGTTTAATCAGCCAGCGGTTCTaGCTGCCCATGGGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: KAPGSISNSRDSSEHQGLISQRF*LPMGSF
Trigger: AAAAGACCCCATGGGCAGCCAGAACCGCTGGCTGAT...TAAACCTTGATGCTCACTAGAATCTCTAGAATTTGAAATGGACCCTGGGGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp TGTGTAAAGACCATCAGAAAGGTGTCATTGAGGTTGCGGTATGGTGGCTTACACGCACTGAGAGTTCCTTaGTCACATTCTTTTGGCGGA +
Preference number: 4 (lower is better)
Translates to: CVKTIRKVSLRLRYGGLHALRVP*SHSFGG
Trigger: TCCGCCAAAAGAATGTGACCAAGGAACTCTCAGTGC...GTGTAAGCCACCATACCGCAACCTCAATGACACCTTTCTGATGGTCTTTACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp CTTCCTGCATACATAGGACACTGGGCTTCTGACTGCAAGTTTCTCCTTTCCAAAGGTCTGAAGGGCATCTaGAAGGACTACTCTCTGAAT +
Preference number: 4 (lower is better)
Translates to: LPAYIGHWASDCKFLLSKGLKGI*KDYSLN
Trigger: ATTCAGAGAGTAGTCCTTCCAGATGCCCTTCAGACC...TTTGGAAAGGAGAAACTTGCAGTCAGAAGCCCAGTGTCCTATGTATGCAGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp TCAGCTCAAAGCAGAACTAATACTTTTAATGGAATGGCTGGAGCTCTCATACTGGGTAGCTCCTCGGCGTaGCAGTGGGTTGCTTTACAT +
Preference number: 4 (lower is better)
Translates to: SAQSRTNTFNGMAGALILGSSSA*QWVALH
Trigger: ATGTAAAGCAACCCACTGCCACGCCGAGGAGCTACC...CAGTATGAGAGCTCCAGCCATTCCATTAAAAGTATTAGTTCTGCTTTGAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp CAAGGTTTACAACCCAATCGAGGAGAACAAGATCTGTGGTGTGCTCCACCATGCTCCATTAGGCTCAACTaGTTTCAGCTCAAAGCAGAA +
Preference number: 4 (lower is better)
Translates to: QGLQPNRGEQDLWCAPPCSIRLN*FQLKAE
Trigger: TTCTGCTTTGAGCTGAAACCAGTTGAGCCTAATGGA...GCATGGTGGAGCACACCACAGATCTTGTTCTCCTCGATTGGGTTGTAAACCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp GACTCCACGGTGTCTCCCGACTCCCAGGATTTTAAGGCTAAATGTGCACTTGGAAGGATAAGCTACTTCTaGAATGGCTTATCCCAATTC +
Preference number: 4 (lower is better)
Translates to: DSTVSPDSQDFKAKCALGRISYF*NGLSQF
Trigger: GAATTGGGATAAGCCATTCCAGAAGTAGCTTATCCT...TCCAAGTGCACATTTAGCCTTAAAATCCTGGGAGTCGGGAGACACCGTGGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp GCTTATCCCAATTCAAGTAAGTCACAGGTGTTATGTTGTCTGCATCTATGGATGGCAGCTCCTGCTCGGTaGTTAACTTTGAGGAACCTC +
Preference number: 4 (lower is better)
Translates to: AYPNSSKSQVLCCLHLWMAAPAR*LTLRNL
Trigger: GAGGTTCCTCAAAGTTAATCACCGAGCAGGAGCTGC...CATCCATAGATGCAGACAACATAACACCTGTGACTTACTTGAATTGGGATAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR TCA 90 bp GATTTTAAGGCTAAATGTGCACTTGGAGGAACAGGGGCTGTAAGGCTATTTCTTGTCCTACAGCATCGCTaGTTTCCAGAGCAGCCAATA +
Preference number: 4 (lower is better)
Translates to: DFKAKCALGGTGAVRLFLVLQHR*FPEQPI
Trigger: TATTGGCTGCTCTGGAAATCAGCGATGCTGTAGGAC...AAGAAATAGCCTTACAGCCCCTGTTCCTCCAAGTGCACATTTAGCCTTAAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp GCTTATCCCAATTCAAGTAAGTCACAGGTGTTATGTTGTCTGCATCTATGGATGTCAAGCTCATCCCGGTaGCCAAGAAACACAGGTCCT +
Preference number: 4 (lower is better)
Translates to: AYPNSSKSQVLCCLHLWMSSSSR*PRNTGP
Trigger: AGGACCTGTGTTTCTTGGTCACCGGGATGAGCTTGA...CATCCATAGATGCAGACAACATAACACCTGTGACTTACTTGAATTGGGATAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp CATTCCAAGATAGGCTTCATAGCTGGGGAAGATCTTAAGATTCTTGGTCTAAGGGTGAGATGCTTCAGGTaGCTGCTAACTCGGTTGGAT +
Preference number: 4 (lower is better)
Translates to: HSKIGFIAGEDLKILGLRVRCFR*LLTRLD
Trigger: ATCCAACCGAGTTAGCAGTCACCTGAAGCATCTCAC...CCTTAGACCAAGAATCTTAAGATCTTCCCCAGCTATGAAGCCTATCTTGGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp TGTGTAAAGACCATCAGAAAGGTGTCATTGAGGTTGCGGTATGGTGGCTTACACGATTTAGGGATGCACTaGGAGTTCCTTGGTCACATT +
Preference number: 4 (lower is better)
Translates to: CVKTIRKVSLRLRYGGLHDLGMH*EFLGHI
Trigger: AATGTGACCAAGGAACTCTCAGTGCATCCCTAAATC...GTGTAAGCCACCATACCGCAACCTCAATGACACCTTTCTGATGGTCTTTACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp AAAGCCCCAGGGTCCATTTCAAATTCTAGAGATTCTAGTGAGCATCAAGGTTTACTATTTCTGGATGCCTaGAGTTCCGGTAGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: KAPGSISNSRDSSEHQGLLFLDA*SSGSSS
Trigger: CGAGGAGCTACCGGAACTTCAGGCATCCAGAAATAG...TAAACCTTGATGCTCACTAGAATCTCTAGAATTTGAAATGGACCCTGGGGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp GATTTTAAGGCTAAATGTGCACTTGGAGGAACAGGGGCTGTAAGGCTATTTCTTAGGACACTGGGCTTCTaGCTGCAAGTTTCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: DFKAKCALGGTGAVRLFLRTLGF*LQVSPF
Trigger: GAAAGGAGAAACTTGCAGTCAGAAGCCCAGTGTCCT...AAGAAATAGCCTTACAGCCCCTGTTCCTCCAAGTGCACATTTAGCCTTAAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp TCAGCTCAAAGCAGAACTAATACTTTTAATGGAATGGCTGGAGCTCTCATACTGTGCATTACTGCCTTCTaGCCACGACCAGCAGACACT +
Preference number: 4 (lower is better)
Translates to: SAQSRTNTFNGMAGALILCITAF*PRPADT
Trigger: AGTGTCTGCTGGTCGTGGTCAGAAGGCAGTAATGCA...CAGTATGAGAGCTCCAGCCATTCCATTAAAAGTATTAGTTCTGCTTTGAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp CTCATAGTCACTAAGTCATTTGCAAAGCCCCAGGGTCCATTTCAAATTCTAGAGGACACCATTCGAATCTaGAAAGCTCACAGGCTGACC +
Preference number: 4 (lower is better)
Translates to: LIVTKSFAKPQGPFQILEDTIRI*KAHRLT
Trigger: GGTCAGCCTGTGAGCTTTTCAGATTCGAATGGTGTC...CTCTAGAATTTGAAATGGACCCTGGGGCTTTGCAAATGACTTAGTGACTATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS-3UTR GCA 90 bp CATTCCAAGATAGGCTTCATAGCTGGGGAAGATCTTAAGATTCTTGGTCTAAGGTTCTCCAGCATCCTCTaGTCTGGATTTTCGGCAGAC +
Preference number: 4 (lower is better)
Translates to: HSKIGFIAGEDLKILGLRFSSIL*SGFSAD
Trigger: GTCTGCCGAAAATCCAGAGCAGAGGATGCTGGAGAA...CCTTAGACCAAGAATCTTAAGATCTTCCCCAGCTATGAAGCCTATCTTGGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp AGGTGTCCCAGGAGCTTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCACCTTAATCACCATCTaGATATTTCCAAAAAGTCCC +
Preference number: 4 (lower is better)
Translates to: RCPRSFEALGLVQSRQTPTLITI*IFPKSP
Trigger: GGGACTTTTTGGAAATATGCAGATGGTGATTAAGGT...GGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAAGCTCCTGGGACACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp TTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCAGCCATGTGCAAGCAATTGAAGTTCCGTTCTaGCTGGAAGAGTTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: FEALGLVQSRQTPSHVQAIEVPF*LEEFFR
Trigger: CCTGAAAAACTCTTCCAGGCAGAACGGAACTTCAAT...TGCTTGCACATGGCTGGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp TCAGCTCAAAGCAGAACTAATACTTTTAATGGAATGGCTGGAGCTCTCATACTGCCTGCTGCCCCCATGTaGCTTTGTTCTTGGTATGTC +
Preference number: 4 (lower is better)
Translates to: SAQSRTNTFNGMAGALILPAAPM*LCSWYV
Trigger: GACATACCAAGAACAAAGGCACATGGGGGCAGCAGG...CAGTATGAGAGCTCCAGCCATTCCATTAAAAGTATTAGTTCTGCTTTGAGCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS-3UTR CCA 90 bp GATTTTAAGGCTAAATGTGCACTTGGAGGAACAGGGGCTGTAAGGCTATTTCTTCCCGGGCTTGTCCCATaGAATATTCCGGAATCTGAA +
Preference number: 4 (lower is better)
Translates to: DFKAKCALGGTGAVRLFLPGLVP*NIPESE
Trigger: TTCAGATTCCGGAATATTCCATGGGACAAGCCCGGG...AAGAAATAGCCTTACAGCCCCTGTTCCTCCAAGTGCACATTTAGCCTTAAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR CCA 90 bp GCTTATCCCAATTCAAGTAAGTCACAGGTGTTATGTTGTCTGCATCTATGGATGGGCTCCTCGGCCTCATaGTCACTGGTTTCATGTCTT +
Preference number: 4 (lower is better)
Translates to: AYPNSSKSQVLCCLHLWMGSSAS*SLVSCL
Trigger: AAGACATGAAACCAGTGACCATGAGGCCGAGGAGCC...CATCCATAGATGCAGACAACATAACACCTGTGACTTACTTGAATTGGGATAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR CCA 90 bp GCTTATCCCAATTCAAGTAAGTCACAGGTGTTATGTTGTCTGCATCTATGGATGGCAAATGGGGAGAAGTaGATACCGGAGTACAGGGAC +
Preference number: 4 (lower is better)
Translates to: AYPNSSKSQVLCCLHLWMANGEK*IPEYRD
Trigger: GTCCCTGTACTCCGGTATCCACTTCTCCCCATTTGC...CATCCATAGATGCAGACAACATAACACCTGTGACTTACTTGAATTGGGATAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR CCA 90 bp GATTTTAAGGCTAAATGTGCACTTGGAGGAACAGGGGCTGTAAGGCTATTTCTTCAGCATCCTCTGCTCTaGATTTTCGGCAGACACAGA +
Preference number: 4 (lower is better)
Translates to: DFKAKCALGGTGAVRLFLQHPLL*IFGRHR
Trigger: TCTGTGTCTGCCGAAAATCCAGAGCAGAGGATGCTG...AAGAAATAGCCTTACAGCCCCTGTTCCTCCAAGTGCACATTTAGCCTTAAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp GAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACTGTCTATTCTTGATGATGGAGTaGATGTTCAGTTTGGAAATT +
Preference number: 4 (lower is better)
Translates to: EHGATPNAVQHNHYQHCLFLMME*MFSLEI
Trigger: AATTTCCAAACTGAACATCCACTCCATCATCAAGAA...TAGACAGTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp CTCATAGTCACTAAGTCATTTGCAAAGCCCCAGGGTCCATTTCAAATTCTAGAGAATTGCTCCAGAGCCTaGTGCACAAAGTCACAGTGG +
Preference number: 4 (lower is better)
Translates to: LIVTKSFAKPQGPFQILENCSRA*CTKSQW
Trigger: CCACTGTGACTTTGTGCACCAGGCTCTGGAGCAATT...CTCTAGAATTTGAAATGGACCCTGGGGCTTTGCAAATGACTTAGTGACTATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp ACCAGACATCACAGACTGTGTAAAGACCATCAGAAAGGTGTCATTGAGGTTGCGGGTTTTCCTCTCAAATaGCTTCTTGGTAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: TRHHRLCKDHQKGVIEVAGFPLK*LLGSWK
Trigger: CTTCCAGCTACCAAGAAGCCATTTGAGAGGAAAACC...CGCAACCTCAATGACACCTTTCTGATGGTCTTTACACAGTCTGTGATGTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp CTTCCTGCATACATAGGACACTGGGCTTCTGACTGCAAGTTTCTCCTTTCCAAAGGTTTTCCTCTCAAATaGCTTCTTGGTAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LPAYIGHWASDCKFLLSKGFPLK*LLGSWK
Trigger: CTTCCAGCTACCAAGAAGCCATTTGAGAGGAAAACC...TTTGGAAAGGAGAAACTTGCAGTCAGAAGCCCAGTGTCCTATGTATGCAGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp GATTTTAAGGCTAAATGTGCACTTGGAGGAACAGGGGCTGTAAGGCTATTTCTTTGCCTCACTGCCATCTaGCTCTGTACTTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: DFKAKCALGGTGAVRLFLCLTAI*LCTSVF
Trigger: GAAGACAGAAGTACAGAGCCAGATGGCAGTGAGGCA...AAGAAATAGCCTTACAGCCCCTGTTCCTCCAAGTGCACATTTAGCCTTAAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp AGTGAGCATCAAGGTTTACAACCCAATCGAGGAGAACAAGATCTGTGGTGTGCTGCATACATAGGACACTaGGCTTCTGACTGCAAGTTT +
Preference number: 4 (lower is better)
Translates to: SEHQGLQPNRGEQDLWCAAYIGH*ASDCKF
Trigger: AAACTTGCAGTCAGAAGCCCAGTGTCCTATGTATGC...AGCACACCACAGATCTTGTTCTCCTCGATTGGGTTGTAAACCTTGATGCTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp CTTCCTGCATACATAGGACACTGGGCTTCTGACTGCAAGTTTCTCCTTTCCAAAGCATACATAGGACACTaGGCTTCTGACTGCAAGTTT +
Preference number: 4 (lower is better)
Translates to: LPAYIGHWASDCKFLLSKAYIGH*ASDCKF
Trigger: AAACTTGCAGTCAGAAGCCCAGTGTCCTATGTATGC...TTTGGAAAGGAGAAACTTGCAGTCAGAAGCCCAGTGTCCTATGTATGCAGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp TTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCAGCCATGTGCAAGCATCCATTAGGCTCAACTaGTTTCAGCTCAAAGCAGAA +
Preference number: 4 (lower is better)
Translates to: FEALGLVQSRQTPSHVQASIRLN*FQLKAE
Trigger: TTCTGCTTTGAGCTGAAACCAGTTGAGCCTAATGGA...TGCTTGCACATGGCTGGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp ACACTCTTCACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGATCCATTAGGCTCAACTaGTTTCAGCTCAAAGCAGAA +
Preference number: 4 (lower is better)
Translates to: TLFTKGLLHYCLLTTTSRSIRLN*FQLKAE
Trigger: TTCTGCTTTGAGCTGAAACCAGTTGAGCCTAATGGA...TCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTGAAGAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp GACTCCACGGTGTCTCCCGACTCCCAGGATTTTAAGGCTAAATGTGCACTTGGAAAGCTACTTCTGGAATaGCTTATCCCAATTCAAGTA +
Preference number: 4 (lower is better)
Translates to: DSTVSPDSQDFKAKCALGKLLLE*LIPIQV
Trigger: TACTTGAATTGGGATAAGCCATTCCAGAAGTAGCTT...TCCAAGTGCACATTTAGCCTTAAAATCCTGGGAGTCGGGAGACACCGTGGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp TCCCAGGATTTTAAGGCTAAATGTGCACTTGGAGGAACAGGGGCTGTAAGGCTAACAATGCAGTCATCTTaGTTTCCAGAACTTACTGAC +
Preference number: 4 (lower is better)
Translates to: SQDFKAKCALGGTGAVRLTMQSS*FPELTD
Trigger: GTCAGTAAGTTCTGGAAATCAAGATGACTGCATTGT...TAGCCTTACAGCCCCTGTTCCTCCAAGTGCACATTTAGCCTTAAAATCCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR TCA 90 bp CTCATAGTCACTAAGTCATTTGCAAAGCCCCAGGGTCCATTTCAAATTCTAGAGGCTGCATGGGTACCATaGTCCGCTCAATACACATTT +
Preference number: 4 (lower is better)
Translates to: LIVTKSFAKPQGPFQILEAAWVP*SAQYTF
Trigger: AAATGTGTATTGAGCGGATCATGGTACCCATGCAGC...CTCTAGAATTTGAAATGGACCCTGGGGCTTTGCAAATGACTTAGTGACTATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp ACCAGACATCACAGACTGTGTAAAGACCATCAGAAAGGTGTCATTGAGGTTGCGAACATGCTCAGTAACTaGTTTAAGGGGGAGATGACA +
Preference number: 4 (lower is better)
Translates to: TRHHRLCKDHQKGVIEVANMLSN*FKGEMT
Trigger: TGTCATCTCCCCCTTAAATCAGTTACTGAGCATGTT...CGCAACCTCAATGACACCTTTCTGATGGTCTTTACACAGTCTGTGATGTCTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp TCAGCTCAAAGCAGAACTAATACTTTTAATGGAATGGCTGGAGCTCTCATACTGAGTCTTGAGCAGCATTaGAGTTCCGTTCTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: SAQSRTNTFNGMAGALILSLEQH*SSVLPG
Trigger: TCCAGGCAGAACGGAACTTCAATGCTGCTCAAGACT...CAGTATGAGAGCTCCAGCCATTCCATTAAAAGTATTAGTTCTGCTTTGAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp CTCATAGTCACTAAGTCATTTGCAAAGCCCCAGGGTCCATTTCAAATTCTAGAGGTCACCTTCCAAAAGTaGGACATCCAAGTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: LIVTKSFAKPQGPFQILEVTFQK*DIQVLS
Trigger: GCTCAAGACTTGGATGTCTCACTTTTGGAAGGTGAC...CTCTAGAATTTGAAATGGACCCTGGGGCTTTGCAAATGACTTAGTGACTATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp GCTTATCCCAATTCAAGTAAGTCACAGGTGTTATGTTGTCTGCATCTATGGATGACACGAAGCCTTTGGTaGCTCCATTGTCAATCAGCC +
Preference number: 4 (lower is better)
Translates to: AYPNSSKSQVLCCLHLWMTRSLW*LHCQSA
Trigger: GGCTGATTGACAATGGAGTCACCAAAGGCTTCGTGT...CATCCATAGATGCAGACAACATAACACCTGTGACTTACTTGAATTGGGATAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp TCAGCTCAAAGCAGAACTAATACTTTTAATGGAATGGCTGGAGCTCTCATACTGACACGAAGCCTTTGGTaGCTCCATTGTCAATCAGCC +
Preference number: 4 (lower is better)
Translates to: SAQSRTNTFNGMAGALILTRSLW*LHCQSA
Trigger: GGCTGATTGACAATGGAGTCACCAAAGGCTTCGTGT...CAGTATGAGAGCTCCAGCCATTCCATTAAAAGTATTAGTTCTGCTTTGAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp AAAGCCCCAGGGTCCATTTCAAATTCTAGAGATTCTAGTGAGCATCAAGGTTTATCAGAAAGGTGTCATTaGGGTTGCGGTATGGTGGCT +
Preference number: 4 (lower is better)
Translates to: KAPGSISNSRDSSEHQGLSERCH*GCGMVA
Trigger: AGCCACCATACCGCAACCTCAATGACACCTTTCTGA...TAAACCTTGATGCTCACTAGAATCTCTAGAATTTGAAATGGACCCTGGGGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp GCTTATCCCAATTCAAGTAAGTCACAGGTGTTATGTTGTCTGCATCTATGGATGCAGATTCTTACAGTCTaGGTAGCCATTTGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: AYPNSSKSQVLCCLHLWMQILTV*VAICLP
Trigger: GGGGAGGCAAATGGCTACTCAGACTGTAAGAATCTG...CATCCATAGATGCAGACAACATAACACCTGTGACTTACTTGAATTGGGATAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS-3UTR GCA 90 bp GATTTTAAGGCTAAATGTGCACTTGGAGGAACAGGGGCTGTAAGGCTATTTCTTGAGGGGAGAAGTGGGTaGTTCAGAAATAATGCAGTC +
Preference number: 4 (lower is better)
Translates to: DFKAKCALGGTGAVRLFLEGRSG*FRNNAV
Trigger: GACTGCATTATTTCTGAAGCACCCACTTCTCCCCTC...AAGAAATAGCCTTACAGCCCCTGTTCCTCCAAGTGCACATTTAGCCTTAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR GCA 90 bp TCAGCTCAAAGCAGAACTAATACTTTTAATGGAATGGCTGGAGCTCTCATACTGTTTGGTACCTGTGCCTaGTGCATGGGTACCATGATC +
Preference number: 4 (lower is better)
Translates to: SAQSRTNTFNGMAGALILFGTCA*CMGTMI
Trigger: GATCATGGTACCCATGCAGCAGGCACAGGTACCAAA...CAGTATGAGAGCTCCAGCCATTCCATTAAAAGTATTAGTTCTGCTTTGAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp AGTGAGCATCAAGGTTTACAACCCAATCGAGGAGAACAAGATCTGTGGTGTGCTAGAGCAGCCAATAATTaGTTCGAGACCTTAATCACC +
Preference number: 4 (lower is better)
Translates to: SEHQGLQPNRGEQDLWCARAANN*FETLIT
Trigger: GGTGATTAAGGTCTCGAAGCAATTATTGGCTGCTCT...AGCACACCACAGATCTTGTTCTCCTCGATTGGGTTGTAAACCTTGATGCTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp GCTTATCCCAATTCAAGTAAGTCACAGGTGTTATGTTGTCTGCATCTATGGATGAGCAGTGGCTTTAATTaGTCCAGAGCCTGGTGCACA +
Preference number: 4 (lower is better)
Translates to: AYPNSSKSQVLCCLHLWMSSGFN*SRAWCT
Trigger: TGTGCACCAGGCTCTGGAGCAATTAAAGCCACTGCT...CATCCATAGATGCAGACAACATAACACCTGTGACTTACTTGAATTGGGATAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp TCAGCTCAAAGCAGAACTAATACTTTTAATGGAATGGCTGGAGCTCTCATACTGGTTGCTGCAGAACTCTaGTGTGCTCTTCGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: SAQSRTNTFNGMAGALILVAAEL*CALRGR
Trigger: TCTTCCACGAAGAGCACAGCAGAGTTCTGCAGCAAC...CAGTATGAGAGCTCCAGCCATTCCATTAAAAGTATTAGTTCTGCTTTGAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp CATTCCAAGATAGGCTTCATAGCTGGGGAAGATCTTAAGATTCTTGGTCTAAGGAAAACCTGGAGTTGCTaGAGAACTCTGCTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: HSKIGFIAGEDLKILGLRKTWSC*RTLLCS
Trigger: AGAGCACAGCAGAGTTCTGCAGCAACTCCAGGTTTT...CCTTAGACCAAGAATCTTAAGATCTTCCCCAGCTATGAAGCCTATCTTGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp CATTCCAAGATAGGCTTCATAGCTGGGGAAGATCTTAAGATTCTTGGTCTAAGGACAAGATCTGTGGTGTaGTCCACCATGCCATGGTTA +
Preference number: 4 (lower is better)
Translates to: HSKIGFIAGEDLKILGLRTRSVV*STMPWL
Trigger: TAACCATGGCATGGTGGAGCACACCACAGATCTTGT...CCTTAGACCAAGAATCTTAAGATCTTCCCCAGCTATGAAGCCTATCTTGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp CTCATAGTCACTAAGTCATTTGCAAAGCCCCAGGGTCCATTTCAAATTCTAGAGACAAGATCTGTGGTGTaGTCCACCATGCCATGGTTA +
Preference number: 4 (lower is better)
Translates to: LIVTKSFAKPQGPFQILETRSVV*STMPWL
Trigger: TAACCATGGCATGGTGGAGCACACCACAGATCTTGT...CTCTAGAATTTGAAATGGACCCTGGGGCTTTGCAAATGACTTAGTGACTATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp GATTTTAAGGCTAAATGTGCACTTGGAGGAACAGGGGCTGTAAGGCTATTTCTTATGTATGAGAATGTGTaGTGGACACTGGAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: DFKAKCALGGTGAVRLFLMYENV*WTLEVS
Trigger: GGACACCTCCAGTGTCCAGCACACATTCTCATACAT...AAGAAATAGCCTTACAGCCCCTGTTCCTCCAAGTGCACATTTAGCCTTAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp AGGTGTCCCAGGAGCTTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCAACGCAGTTGAATTTTaGATAACTAATCTGGGAATG +
Preference number: 4 (lower is better)
Translates to: RCPRSFEALGLVQSRQTPNAVEF*ITNLGM
Trigger: CATTCCCAGATTAGTTATGCAAAATTCAACTGCGTT...GGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAAGCTCCTGGGACACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp CTTCCTGCATACATAGGACACTGGGCTTCTGACTGCAAGTTTCTCCTTTCCAAACTCAAAATCAATGTTTaGTACCTGTGCCTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: LPAYIGHWASDCKFLLSKLKINV*YLCLLH
Trigger: ATGCAGCAGGCACAGGTACCAAACATTGATTTTGAG...TTTGGAAAGGAGAAACTTGCAGTCAGAAGCCCAGTGTCCTATGTATGCAGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp AGGTGTCCCAGGAGCTTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCTTCTTGATGATGGAGTaGATGTTCAGTTTGGAAATT +
Preference number: 4 (lower is better)
Translates to: RCPRSFEALGLVQSRQTPFLMME*MFSLEI
Trigger: AATTTCCAAACTGAACATCCACTCCATCATCAAGAA...GGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAAGCTCCTGGGACACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp CTCATAGTCACTAAGTCATTTGCAAAGCCCCAGGGTCCATTTCAAATTCTAGAGTTGCCCATTTCGTCCTaGTACGGAGTAGCCAACTAT +
Preference number: 4 (lower is better)
Translates to: LIVTKSFAKPQGPFQILELPISS*YGVANY
Trigger: ATAGTTGGCTACTCCGTACCAGGACGAAATGGGCAA...CTCTAGAATTTGAAATGGACCCTGGGGCTTTGCAAATGACTTAGTGACTATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp AAAGCCCCAGGGTCCATTTCAAATTCTAGAGATTCTAGTGAGCATCAAGGTTTATGCCTCACTGCCATCTaGCTCTGTACTTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: KAPGSISNSRDSSEHQGLCLTAI*LCTSVF
Trigger: GAAGACAGAAGTACAGAGCCAGATGGCAGTGAGGCA...TAAACCTTGATGCTCACTAGAATCTCTAGAATTTGAAATGGACCCTGGGGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp CTTCCTGCATACATAGGACACTGGGCTTCTGACTGCAAGTTTCTCCTTTCCAAATTTTGCGGATATAATTaGAGGGAACGTAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: LPAYIGHWASDCKFLLSKFCGYN*RERSPS
Trigger: AGAAGGGCTACGTTCCCTCCAATTATATCCGCAAAA...TTTGGAAAGGAGAAACTTGCAGTCAGAAGCCCAGTGTCCTATGTATGCAGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp GCTTATCCCAATTCAAGTAAGTCACAGGTGTTATGTTGTCTGCATCTATGGATGTATGAGAATGTGTGCTaGACACTGGAGGTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: AYPNSSKSQVLCCLHLWMYENVC*TLEVSQ
Trigger: CTGGGACACCTCCAGTGTCCAGCACACATTCTCATA...CATCCATAGATGCAGACAACATAACACCTGTGACTTACTTGAATTGGGATAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp CAAGGTTTACAACCCAATCGAGGAGAACAAGATCTGTGGTGTGCTCCACCATGCAAGCTACTTCTGGAATaGCTTATCCCAATTCAAGTA +
Preference number: 4 (lower is better)
Translates to: QGLQPNRGEQDLWCAPPCKLLLE*LIPIQV
Trigger: TACTTGAATTGGGATAAGCCATTCCAGAAGTAGCTT...GCATGGTGGAGCACACCACAGATCTTGTTCTCCTCGATTGGGTTGTAAACCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp TTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCAGCCATGTGCAAGCAAGGATAAGCTACTTCTaGAATGGCTTATCCCAATTC +
Preference number: 4 (lower is better)
Translates to: FEALGLVQSRQTPSHVQARISYF*NGLSQF
Trigger: GAATTGGGATAAGCCATTCCAGAAGTAGCTTATCCT...TGCTTGCACATGGCTGGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp CATTCCAAGATAGGCTTCATAGCTGGGGAAGATCTTAAGATTCTTGGTCTAAGGGAGCGCAGTGAGATGTaGAGTTATTTCAACCTCAGG +
Preference number: 4 (lower is better)
Translates to: HSKIGFIAGEDLKILGLRERSEM*SYFNLR
Trigger: CCTGAGGTTGAAATAACTCCACATCTCACTGCGCTC...CCTTAGACCAAGAATCTTAAGATCTTCCCCAGCTATGAAGCCTATCTTGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS-3UTR CCA 90 bp GACTCCACGGTGTCTCCCGACTCCCAGGATTTTAAGGCTAAATGTGCACTTGGATCTTTTCTAGCCTTCTaGGTTTCACACATATTCTAT +
Preference number: 4 (lower is better)
Translates to: DSTVSPDSQDFKAKCALGSFLAF*VSHIFY
Trigger: ATAGAATATGTGTGAAACCCAGAAGGCTAGAAAAGA...TCCAAGTGCACATTTAGCCTTAAAATCCTGGGAGTCGGGAGACACCGTGGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS-3UTR CCA 90 bp CACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGACACTGTGGTTCCTGTCCCCTTCATaGTATTTGATAAATTCCTTA +
Preference number: 4 (lower is better)
Translates to: HKRTLALLPSDHDQQTLWFLSPS*YLINSL
Trigger: TAAGGAATTTATCAAATACCATGAAGGGGACAGGAA...CCACAGTGTCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS-3UTR CCA 90 bp AGCCATGAATTCTTTTCATCTGAGTTGGCATCCGGTCAGCTGAGCATGGAACATAGGAGCGTCATTTCTTaGGTTTTCTTGCTGTTTTGC +
Preference number: 4 (lower is better)
Translates to: SHEFFSSELASGQLSMEHRSVIS*VFLLFC
Trigger: GCAAAACAGCAAGAAAACCCAAGAAATGACGCTCCT...ATGTTCCATGCTCAGCTGACCGGATGCCAACTCAGATGAAAAGAATTCATGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS-3UTR TCA 90 bp GATTTTAAGGCTAAATGTGCACTTGGAGGAACAGGGGCTGTAAGGCTATTTCTTCATCTCCAATCTCTCTaGGATGGAGTAAACACTGGA +
Preference number: 4 (lower is better)
Translates to: DFKAKCALGGTGAVRLFLHLQSL*DGVNTG
Trigger: TCCAGTGTTTACTCCATCTCAGAGAGATTGGAGATG...AAGAAATAGCCTTACAGCCCCTGTTCCTCCAAGTGCACATTTAGCCTTAAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR TCA 90 bp CTCATAGTCACTAAGTCATTTGCAAAGCCCCAGGGTCCATTTCAAATTCTAGAGTTGGGTTTCGTGCCTTaGAGGTGTAGACAGCAAAAT +
Preference number: 4 (lower is better)
Translates to: LIVTKSFAKPQGPFQILELGFVP*RCRQQN
Trigger: ATTTTGCTGTCTACACCTTCAAGGCACGAAACCCAA...CTCTAGAATTTGAAATGGACCCTGGGGCTTTGCAAATGACTTAGTGACTATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp CATTCCAAGATAGGCTTCATAGCTGGGGAAGATCTTAAGATTCTTGGTCTAAGGTTGGGTTTCGTGCCTTaGAGGTGTAGACAGCAAAAT +
Preference number: 4 (lower is better)
Translates to: HSKIGFIAGEDLKILGLRLGFVP*RCRQQN
Trigger: ATTTTGCTGTCTACACCTTCAAGGCACGAAACCCAA...CCTTAGACCAAGAATCTTAAGATCTTCCCCAGCTATGAAGCCTATCTTGGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp GATTTTAAGGCTAAATGTGCACTTGGAGGAACAGGGGCTGTAAGGCTATTTCTTAACCTTCTGGAAAAATaGCTCTTCGGCCCTCTAACT +
Preference number: 4 (lower is better)
Translates to: DFKAKCALGGTGAVRLFLNLLEK*LFGPLT
Trigger: AGTTAGAGGGCCGAAGAGGCATTTTTCCAGAAGGTT...AAGAAATAGCCTTACAGCCCCTGTTCCTCCAAGTGCACATTTAGCCTTAAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR GCA 90 bp TCCCAGGATTTTAAGGCTAAATGTGCACTTGGAGGAACAGGGGCTGTAAGGCTAACCTTAATCACCATCTaGATATTTCCAAAAAGTCCC +
Preference number: 4 (lower is better)
Translates to: SQDFKAKCALGGTGAVRLTLITI*IFPKSP
Trigger: GGGACTTTTTGGAAATATGCAGATGGTGATTAAGGT...TAGCCTTACAGCCCCTGTTCCTCCAAGTGCACATTTAGCCTTAAAATCCTGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp TCAGCTCAAAGCAGAACTAATACTTTTAATGGAATGGCTGGAGCTCTCATACTGGTAAAAACCTGGAGTTaGTGCAGAACTCTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: SAQSRTNTFNGMAGALILVKTWS*CRTLLC
Trigger: GCACAGCAGAGTTCTGCAGCAACTCCAGGTTTTTAC...CAGTATGAGAGCTCCAGCCATTCCATTAAAAGTATTAGTTCTGCTTTGAGCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp CATTCCAAGATAGGCTTCATAGCTGGGGAAGATCTTAAGATTCTTGGTCTAAGGGGGAATACATTCTTTTaGGAGGTAGGCTGGCATAGT +
Preference number: 4 (lower is better)
Translates to: HSKIGFIAGEDLKILGLRGNTFF*EVGWHS
Trigger: ACTATGCCAGCCTACCTCCCAAAAGAATGTATTCCC...CCTTAGACCAAGAATCTTAAGATCTTCCCCAGCTATGAAGCCTATCTTGGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR CCA 90 bp AAAGCCCCAGGGTCCATTTCAAATTCTAGAGATTCTAGTGAGCATCAAGGTTTACAGACTGGCGGTCAATaGTTTTCCTCTCAAATGGCT +
Preference number: 4 (lower is better)
Translates to: KAPGSISNSRDSSEHQGLQTGGQ*FSSQMA
Trigger: AGCCATTTGAGAGGAAAACCATTGACCGCCAGTCTG...TAAACCTTGATGCTCACTAGAATCTCTAGAATTTGAAATGGACCCTGGGGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp GCTTATCCCAATTCAAGTAAGTCACAGGTGTTATGTTGTCTGCATCTATGGATGGCACTGAGAGTTCCTTaGTCACATTCTTTTGGCGGA +
Preference number: 4 (lower is better)
Translates to: AYPNSSKSQVLCCLHLWMALRVP*SHSFGG
Trigger: TCCGCCAAAAGAATGTGACCAAGGAACTCTCAGTGC...CATCCATAGATGCAGACAACATAACACCTGTGACTTACTTGAATTGGGATAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp AAAGCCCCAGGGTCCATTTCAAATTCTAGAGATTCTAGTGAGCATCAAGGTTTAGGTCTGAAGGGCATCTaGAAGGACTACTCTCTGAAT +
Preference number: 4 (lower is better)
Translates to: KAPGSISNSRDSSEHQGLGLKGI*KDYSLN
Trigger: ATTCAGAGAGTAGTCCTTCCAGATGCCCTTCAGACC...TAAACCTTGATGCTCACTAGAATCTCTAGAATTTGAAATGGACCCTGGGGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp CTTCCTGCATACATAGGACACTGGGCTTCTGACTGCAAGTTTCTCCTTTCCAAAAGGATAAGCTACTTCTaGAATGGCTTATCCCAATTC +
Preference number: 4 (lower is better)
Translates to: LPAYIGHWASDCKFLLSKRISYF*NGLSQF
Trigger: GAATTGGGATAAGCCATTCCAGAAGTAGCTTATCCT...TTTGGAAAGGAGAAACTTGCAGTCAGAAGCCCAGTGTCCTATGTATGCAGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp CTCATAGTCACTAAGTCATTTGCAAAGCCCCAGGGTCCATTTCAAATTCTAGAGTTGATTGTCTGGGTTTaGCTACCCTTGAAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: LIVTKSFAKPQGPFQILELIVWV*LPLKLK
Trigger: TTTCAGCTTCAAGGGTAGTCAAACCCAGACAATCAA...CTCTAGAATTTGAAATGGACCCTGGGGCTTTGCAAATGACTTAGTGACTATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR TCA 90 bp AAAGCCCCAGGGTCCATTTCAAATTCTAGAGATTCTAGTGAGCATCAAGGTTTAGATTTAGGGATGCACTaGGAGTTCCTTGGTCACATT +
Preference number: 4 (lower is better)
Translates to: KAPGSISNSRDSSEHQGLDLGMH*EFLGHI
Trigger: AATGTGACCAAGGAACTCTCAGTGCATCCCTAAATC...TAAACCTTGATGCTCACTAGAATCTCTAGAATTTGAAATGGACCCTGGGGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR TCA 90 bp GCTTATCCCAATTCAAGTAAGTCACAGGTGTTATGTTGTCTGCATCTATGGATGGATTTAGGGATGCACTaGGAGTTCCTTGGTCACATT +
Preference number: 4 (lower is better)
Translates to: AYPNSSKSQVLCCLHLWMDLGMH*EFLGHI
Trigger: AATGTGACCAAGGAACTCTCAGTGCATCCCTAAATC...CATCCATAGATGCAGACAACATAACACCTGTGACTTACTTGAATTGGGATAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp CTCATAGTCACTAAGTCATTTGCAAAGCCCCAGGGTCCATTTCAAATTCTAGAGAGAGCAGCCAATAATTaGTTCGAGACCTTAATCACC +
Preference number: 4 (lower is better)
Translates to: LIVTKSFAKPQGPFQILERAANN*FETLIT
Trigger: GGTGATTAAGGTCTCGAAGCAATTATTGGCTGCTCT...CTCTAGAATTTGAAATGGACCCTGGGGCTTTGCAAATGACTTAGTGACTATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp GCTTATCCCAATTCAAGTAAGTCACAGGTGTTATGTTGTCTGCATCTATGGATGAGGCTGGATTTGTCCTaGTTAAAATGTCTCCCAACC +
Preference number: 4 (lower is better)
Translates to: AYPNSSKSQVLCCLHLWMRLDLS*LKCLPT
Trigger: GGTTGGGAGACATTTTAAGCAGGACAAATCCAGCCT...CATCCATAGATGCAGACAACATAACACCTGTGACTTACTTGAATTGGGATAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS-3UTR CCA 90 bp GCTTATCCCAATTCAAGTAAGTCACAGGTGTTATGTTGTCTGCATCTATGGATGCATTACTCTCTGTACTaGTTTGATGAGGAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: AYPNSSKSQVLCCLHLWMHYSLY*FDEEGA
Trigger: GGCTCCTTCCTCATCAAACCAGTACAGAGAGTAATG...CATCCATAGATGCAGACAACATAACACCTGTGACTTACTTGAATTGGGATAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp ACACTCTTCACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGATTCTTGATGATGGAGTaGATGTTCAGTTTGGAAATT +
Preference number: 4 (lower is better)
Translates to: TLFTKGLLHYCLLTTTSRFLMME*MFSLEI
Trigger: AATTTCCAAACTGAACATCCACTCCATCATCAAGAA...TCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTGAAGAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp GATTTTAAGGCTAAATGTGCACTTGGAGGAACAGGGGCTGTAAGGCTATTTCTTTTTTGCGGATATAATTaGAGGGAACGTAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: DFKAKCALGGTGAVRLFLFCGYN*RERSPS
Trigger: AGAAGGGCTACGTTCCCTCCAATTATATCCGCAAAA...AAGAAATAGCCTTACAGCCCCTGTTCCTCCAAGTGCACATTTAGCCTTAAAATC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp AGCCATGAATTCTTTTCATCTGAGTTGGCATCCGGTCAGCTGAGCATGGAACATATGTGCCTTTGTTCTTaGTATGTCAGTGCCATTATA +
Preference number: 4 (lower is better)
Translates to: SHEFFSSELASGQLSMEHMCLCS*YVSAII
Trigger: TATAATGGCACTGACATACCAAGAACAAAGGCACAT...ATGTTCCATGCTCAGCTGACCGGATGCCAACTCAGATGAAAAGAATTCATGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS-3UTR TCA 90 bp GCTTATCCCAATTCAAGTAAGTCACAGGTGTTATGTTGTCTGCATCTATGGATGAGGTTTAGCTCTTCTTaGGCTCTACTGTACATATCC +
Preference number: 4 (lower is better)
Translates to: AYPNSSKSQVLCCLHLWMRFSSS*ALLYIS
Trigger: GGATATGTACAGTAGAGCTCAAGAAGAGCTAAACCT...CATCCATAGATGCAGACAACATAACACCTGTGACTTACTTGAATTGGGATAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR TCA 90 bp GCTTATCCCAATTCAAGTAAGTCACAGGTGTTATGTTGTCTGCATCTATGGATGAACATGCTCAGTAACTaGTTTAAGGGGGAGATGACA +
Preference number: 4 (lower is better)
Translates to: AYPNSSKSQVLCCLHLWMNMLSN*FKGEMT
Trigger: TGTCATCTCCCCCTTAAATCAGTTACTGAGCATGTT...CATCCATAGATGCAGACAACATAACACCTGTGACTTACTTGAATTGGGATAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp AGCCATGAATTCTTTTCATCTGAGTTGGCATCCGGTCAGCTGAGCATGGAACATGTCATTTCTCTTAGTTaGTGGAGTTCCATATTCAAA +
Preference number: 4 (lower is better)
Translates to: SHEFFSSELASGQLSMEHVISLS*WSSIFK
Trigger: TTTGAATATGGAACTCCAGCAACTAAGAGAAATGAC...ATGTTCCATGCTCAGCTGACCGGATGCCAACTCAGATGAAAAGAATTCATGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR GCA 90 bp TCAGCTCAAAGCAGAACTAATACTTTTAATGGAATGGCTGGAGCTCTCATACTGATTGAAGTTCCGTTCTaGCTGGAAGAGTTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: SAQSRTNTFNGMAGALILIEVPF*LEEFFR
Trigger: CCTGAAAAACTCTTCCAGGCAGAACGGAACTTCAAT...CAGTATGAGAGCTCCAGCCATTCCATTAAAAGTATTAGTTCTGCTTTGAGCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp CTCATAGTCACTAAGTCATTTGCAAAGCCCCAGGGTCCATTTCAAATTCTAGAGTTTCTTGGGTTTTCTTaGTGTTTTGCACGAACTCTG +
Preference number: 4 (lower is better)
Translates to: LIVTKSFAKPQGPFQILEFLGFS*CFARTL
Trigger: CAGAGTTCGTGCAAAACAGCAAGAAAACCCAAGAAA...CTCTAGAATTTGAAATGGACCCTGGGGCTTTGCAAATGACTTAGTGACTATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS-3UTR CCA 90 bp AAAGCCCCAGGGTCCATTTCAAATTCTAGAGATTCTAGTGAGCATCAAGGTTTACTCCCTCTTTTAGACTaGGAATGGTCACAATTTCCA +
Preference number: 4 (lower is better)
Translates to: KAPGSISNSRDSSEHQGLLPLLD*EWSQFP
Trigger: TGGAAATTGTGACCATTCCCAGTCTAAAAGAGGGAG...TAAACCTTGATGCTCACTAGAATCTCTAGAATTTGAAATGGACCCTGGGGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR CCA 90 bp GCTTATCCCAATTCAAGTAAGTCACAGGTGTTATGTTGTCTGCATCTATGGATGCTCAAAATCAATGTTTaGTACCTGTGCCTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: AYPNSSKSQVLCCLHLWMLKINV*YLCLLH
Trigger: ATGCAGCAGGCACAGGTACCAAACATTGATTTTGAG...CATCCATAGATGCAGACAACATAACACCTGTGACTTACTTGAATTGGGATAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CCA 90 bp CTTCCTGCATACATAGGACACTGGGCTTCTGACTGCAAGTTTCTCCTTTCCAAACAATCCTCAAGATTATaGTTAACATTCTCATGGTCT +
Preference number: 4 (lower is better)
Translates to: LPAYIGHWASDCKFLLSKQSSRL*LTFSWS
Trigger: AGACCATGAGAATGTTAACCATAATCTTGAGGATTG...TTTGGAAAGGAGAAACTTGCAGTCAGAAGCCCAGTGTCCTATGTATGCAGGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS-3UTR CCA 90 bp GATTTTAAGGCTAAATGTGCACTTGGAGGAACAGGGGCTGTAAGGCTATTTCTTGAGAATCTGTCCCTCTaGAATTACGAGATTTATATG +
Preference number: 4 (lower is better)
Translates to: DFKAKCALGGTGAVRLFLENLSL*NYEIYM
Trigger: CATATAAATCTCGTAATTCCAGAGGGACAGATTCTC...AAGAAATAGCCTTACAGCCCCTGTTCCTCCAAGTGCACATTTAGCCTTAAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS-3UTR GCA 90 bp AAAGCCCCAGGGTCCATTTCAAATTCTAGAGATTCTAGTGAGCATCAAGGTTTAACCTTAATCACCATCTaGATATTTCCAAAAAGTCCC +
Preference number: 4 (lower is better)
Translates to: KAPGSISNSRDSSEHQGLTLITI*IFPKSP
Trigger: GGGACTTTTTGGAAATATGCAGATGGTGATTAAGGT...TAAACCTTGATGCTCACTAGAATCTCTAGAATTTGAAATGGACCCTGGGGCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR GCA 90 bp CTCATAGTCACTAAGTCATTTGCAAAGCCCCAGGGTCCATTTCAAATTCTAGAGCATAATATGAGTCTTTaGTTTGGGATACATGTTGTC +
Preference number: 4 (lower is better)
Translates to: LIVTKSFAKPQGPFQILEHNMSL*FGIHVV
Trigger: GACAACATGTATCCCAAAGCAAAGACTCATATTATG...CTCTAGAATTTGAAATGGACCCTGGGGCTTTGCAAATGACTTAGTGACTATGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS GCA 90 bp GTGCTGCCGCTGTTCTGGCGTGGGAACCTGGGGGAGGAGCTGCCGTaGTCAGACTCTGTGGAGGAGTGGCTACCCACGGAGGCATCGGAG +
Preference number: 5 (lower is better)
Translates to: VLPLFWRGNLGEELP*SDSVEEWLPTEASE
Trigger: CTCCGATGCCTCCGTGGGTAGCCACTCCTCCACAGAGTCTGAGCACGGCAGCTCCTCCCCCAGGTTCCCACGCCAGAACAGCGGCAGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS GCA 90 bp GAAGAAGCCCCGTGCGCCCCAGCAGCTTCGGCCCTGCAGCCAGCCTaGAGTGGGAATGCCATCGAGAATCACCAGGTCACCTCGATGGAG +
Preference number: 5 (lower is better)
Translates to: EEAPCAPAASALQPA*SGNAIENHQVTSME
Trigger: CTCCATCGAGGTGACCTGGTGATTCTCGATGGCATTCCCACTGCAGGCTGGCTGCAGGGCCGAAGCTGCTGGGGCGCACGGGGCTTCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS CCA 90 bp ACAGCCATGCTGCTGGGGTTGAAGGTCAGGGTGCTGCCGCTGTTCTaGCGTGGGAACCTGGGGGAGGAGCTGCCGTGCTCAGACTCTGTG +
Preference number: 5 (lower is better)
Translates to: TAMLLGLKVRVLPLF*RGNLGEELPCSDSV
Trigger: CACAGAGTCTGAGCACGGCAGCTCCTCCCCCAGGTTCCCACGCCAGAACAGCGGCAGCACCCTGACCTTCAACCCCAGCAGCATGGCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp CTCTCGGTGGGCCGCCAGAACCCTCGGCGGACTGAAAGCAAAGGCAGCAAGGCTCAGAGTCCCCTGACCTaGGCTGGGAGGTGGAGTCTG +
Preference number: 5 (lower is better)
Translates to: LSVGRQNPRRTESKGSKAQSPLT*AGRWSL
Trigger: CAGACTCCACCTCCCAGCCAAGGTCAGGGGACTCTG...AGCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTCTGGCGGCCCACCGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS GCA 90 bp GCCCTGGGCGTACTGGTGGAACTTGGGCAGCTCATCCAGCAGCTGTaGATTCAGGGCCTCATAGTTGTTCCGGGCCGACTGCAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: ALGVLVELGQLIQQL*IQGLIVVPGRLQLL
Trigger: GAGGAGCTGCAGTCGGCCCGGAACAACTATGAGGCCCTGAATGCACAGCTGCTGGATGAGCTGCCCAAGTTCCACCAGTACGCCCAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS TCA 90 bp AGCCCCATTAGGGCCCGGGCTTGTCCCATGGAATATTCCGGAATCTaGAACAGGGCGCTCTGGGAGTGCCACTGCCGGCTCTGTGAGGAG +
Preference number: 5 (lower is better)
Translates to: SPIRARACPMEYSGI*NRALWECHCRLCEE
Trigger: CTCCTCACAGAGCCGGCAGTGGCACTCCCAGAGCGCCCTGTTTCAGATTCCGGAATATTCCATGGGACAAGCCCGGGCCCTAATGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR CAA 90 bp CTCTCGGTGGGCCGCCAGAACCCTCGGCGGACTGAAAGCAAAGGCAGCAAGGCTACTGTAGCATGTAACTaGGCAGGCCCAGGAGTGGCT +
Preference number: 5 (lower is better)
Translates to: LSVGRQNPRRTESKGSKATVACN*AGPGVA
Trigger: AGCCACTCCTGGGCCTGCCAAGTTACATGCTACAGT...AGCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTCTGGCGGCCCACCGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp TGGGCCGCCAGAACCCTCGGCGGACTGAAAGCAAAGGCAGCAAGGCTGGGTGGCCCTTTGGTGACTCCATaGTCAATCAGCCAGCGGTTC +
Preference number: 5 (lower is better)
Translates to: WAARTLGGLKAKAARLGGPLVTP*SISQRF
Trigger: GAACCGCTGGCTGATTGACAATGGAGTCACCAAAGG...GCCACCCAGCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTCTGGCGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp TGGGCCGCCAGAACCCTCGGCGGACTGAAAGCAAAGGCAGCAAGGCTGGGTGGCGACGAGGTCTTGACTTaGCCCATTTCGTCCTGGTAC +
Preference number: 5 (lower is better)
Translates to: WAARTLGGLKAKAARLGGDEVLT*PISSWY
Trigger: GTACCAGGACGAAATGGGCAAAGTCAAGACCTCGTC...GCCACCCAGCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTCTGGCGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp CTCTCGGTGGGCCGCCAGAACCCTCGGCGGACTGAAAGCAAAGGCAGCAAGGCTTGTCGAGATAGGAGCTaGGGGGATACCGCATTCGTT +
Preference number: 5 (lower is better)
Translates to: LSVGRQNPRRTESKGSKACRDRS*GDTAFV
Trigger: AACGAATGCGGTATCCCCCAAGCTCCTATCTCGACA...AGCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTCTGGCGGCCCACCGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR CAA 90 bp AGCAGGGAGGCGGGAGGGTTGCTTGAGCCCAGGCGTTTAAGACCAGCCTGGGCACCTTTGGTGACTCCATaGTCAATCAGCCAGCGGTTC +
Preference number: 5 (lower is better)
Translates to: SREAGGLLEPRRLRPAWAPLVTP*SISQRF
Trigger: GAACCGCTGGCTGATTGACAATGGAGTCACCAAAGG...TGCCCAGGCTGGTCTTAAACGCCTGGGCTCAAGCAACCCTCCCGCCTCCCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS GCA 90 bp CAGACTCTGTGGAGGAGTGGCTACCCACGGAGGCATCGGAGTGGCTaGGGCGAGGATTGTAGGGCTTTAGGAAAGAGCTGTACACGAAGC +
Preference number: 5 (lower is better)
Translates to: QTLWRSGYPRRHRSG*GEDCRALGKSCTRS
Trigger: GCTTCGTGTACAGCTCTTTCCTAAAGCCCTACAATCCTCGCCGCAGCCACTCCGATGCCTCCGTGGGTAGCCACTCCTCCACAGAGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp ACCAGACATCACAGACTGTGTAAAGACCATCAGAAAGGTGTCATTGAGGTTGCGCGGCGCGGCAGGCAGTaGCAGCCGCCAGTCCCCAGC +
Preference number: 5 (lower is better)
Translates to: TRHHRLCKDHQKGVIEVARRGRQ*QPPVPS
Trigger: GCTGGGGACTGGCGGCTGCAACTGCCTGCCGCGCCG...CGCAACCTCAATGACACCTTTCTGATGGTCTTTACACAGTCTGTGATGTCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR CAA 90 bp CTCTCGGTGGGCCGCCAGAACCCTCGGCGGACTGAAAGCAAAGGCAGCAAGGCTCTCTCAAATGGCTTCTaGGTAGCTGGAAGAGACTCC +
Preference number: 5 (lower is better)
Translates to: LSVGRQNPRRTESKGSKALSNGF*VAGRDS
Trigger: GGAGTCTCTTCCAGCTACCAAGAAGCCATTTGAGAG...AGCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTCTGGCGGCCCACCGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp AGCAGGGAGGCGGGAGGGTTGCTTGAGCCCAGGCGTTTAAGACCAGCCTGGGCACTCTCAAATGGCTTCTaGGTAGCTGGAAGAGACTCC +
Preference number: 5 (lower is better)
Translates to: SREAGGLLEPRRLRPAWALSNGF*VAGRDS
Trigger: GGAGTCTCTTCCAGCTACCAAGAAGCCATTTGAGAG...TGCCCAGGCTGGTCTTAAACGCCTGGGCTCAAGCAACCCTCCCGCCTCCCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp TGGGCCGCCAGAACCCTCGGCGGACTGAAAGCAAAGGCAGCAAGGCTGGGTGGCCTTGGTCACATTCTTTaGGCGGAGGAGATGCATCTT +
Preference number: 5 (lower is better)
Translates to: WAARTLGGLKAKAARLGGLGHIL*AEEMHL
Trigger: AAGATGCATCTCCTCCGCCAAAAGAATGTGACCAAG...GCCACCCAGCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTCTGGCGGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp CTCTCGGTGGGCCGCCAGAACCCTCGGCGGACTGAAAGCAAAGGCAGCAAGGCTATCAGAAAGGTGTCATaGAGGTTGCGGTATGGTGGC +
Preference number: 5 (lower is better)
Translates to: LSVGRQNPRRTESKGSKAIRKVS*RLRYGG
Trigger: GCCACCATACCGCAACCTCAATGACACCTTTCTGAT...AGCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTCTGGCGGCCCACCGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS GCA 90 bp AAGAGGCATTTCCCACTCCACGCCTGGGCTTCTCGGGGGCCCTCCTaGGGTGTCCTCGTCCTGATAAGAGTTTCTGTCTGTGTCATACTC +
Preference number: 5 (lower is better)
Translates to: KRHFPLHAWASRGPS*GVLVLIRVSVCVIL
Trigger: GAGTATGACACAGACAGAAACTCTTATCAGGACGAGGACACCGCAGGAGGGCCCCCGAGAAGCCCAGGCGTGGAGTGGGAAATGCCTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS CCA 90 bp CATCCAGCTGAGCAGAAAGCCCCATTAGGGCCCGGGCTTGTCCCATaGAATATTCCGGAATCTGAAACAGGGCGCTCTGGGAGTGCCACT +
Preference number: 5 (lower is better)
Translates to: HPAEQKAPLGPGLVP*NIPESETGRSGSAT
Trigger: AGTGGCACTCCCAGAGCGCCCTGTTTCAGATTCCGGAATATTCCATGGGACAAGCCCGGGCCCTAATGGGGCTTTCTGCTCAGCTGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS CCA 90 bp GTGGTGCAGGTTTTAGGTTCTGGTCAACCAGCAAATGGGGAGAAGTaGATACCGGAGTACAGGGACGAGGTGGCGGTGGCCTTAGGGCCT +
Preference number: 5 (lower is better)
Translates to: VVQVLGSGQPANGEK*IPEYRDEVAVALGP
Trigger: AGGCCCTAAGGCCACCGCCACCTCGTCCCTGTACTCCGGTATCCACTTCTCCCCATTTGCTGGTTGACCAGAACCTAAAACCTGCACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS CCA 90 bp ACCACCAAGGGTGGTGCAGGTTTTAGGTTCTGGTCAACCAGCAAATaGGGAGAAGTGGATACCGGAGTACAGGGACGAGGTGGCGGTGGC +
Preference number: 5 (lower is better)
Translates to: TTKGGAGFRFWSTSK*GEVDTGVQGRGGGG
Trigger: GCCACCGCCACCTCGTCCCTGTACTCCGGTATCCACTTCTCCCCATTTGCTGGTTGACCAGAACCTAAAACCTGCACCACCCTTGGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS CCA 90 bp GGGCGAGAGGGTCGCACCACCAAGGGTGGTGCAGGTTTTAGGTTCTaGTCAACCAGCAAATGGGGAGAAGTGGATACCGGAGTACAGGGA +
Preference number: 5 (lower is better)
Translates to: GREGRTTKGGAGFRF*STSKWGEVDTGVQG
Trigger: TCCCTGTACTCCGGTATCCACTTCTCCCCATTTGCTGGTTGACCAGAACCTAAAACCTGCACCACCCTTGGTGGTGCGACCCTCTCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR CAA 90 bp TGTGGTGTGCTCCACCATGCCATGGTTAAGCAACGCAGACAGGGCCTGTGTCTCAACAAGCCCTTGGGCTaGCGGACCAGGCTTCATCTC +
Preference number: 5 (lower is better)
Translates to: CGVLHHAMVKQRRQGLCLNKPLG*RTRLHL
Trigger: GAGATGAAGCCTGGTCCGCAAGCCCAAGGGCTTGTT...GAGACACAGGCCCTGTCTGCGTTGCTTAACCATGGCATGGTGGAGCACACCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS TCA 90 bp CTGTTGTGTCAGCTTCGAGTCCAGGTCAGTGCTGCCGTCTCCCTGTaGATGTGTTGCTGCTTCCATAACAAGCCCTTGGGCTTGCGGACC +
Preference number: 5 (lower is better)
Translates to: LLCQLRVQVSAAVSL*MCCCFHNKPLGLRT
Trigger: GGTCCGCAAGCCCAAGGGCTTGTTATGGAAGCAGCAACACATTCACAGGGAGACGGCAGCACTGACCTGGACTCGAAGCTGACACAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS GCA 90 bp GATGCACCCTCTCAAACTGCTCCAGGTCCCGGTGTCCTCTCTCCATaGACACATCCCACATGCTCACAGCAGCCACCACTTTCACACATG +
Preference number: 5 (lower is better)
Translates to: DAPSQTAPGPGVLSP*THPTCSQQPPLSHM
Trigger: CATGTGTGAAAGTGGTGGCTGCTGTGAGCATGTGGGATGTGTGCATGGAGAGAGGACACCGGGACCTGGAGCAGTTTGAGAGGGTGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324109.9
ENST00000472036.1
ENST00000543621.6
ENST00000636706.1
CDS GCA 90 bp TGCTGTTTTGCACGAACTCTGAGCGCCTCAGGGTGCTGGGTGCTGTaGGGCGGAGGCAACTATTCCTTCTCCAAGTCTCTGGGCCATTTA +
Preference number: 5 (lower is better)
Translates to: CCFARTLSASGCWVL*GGGNYSFSKSLGHL
Trigger: TAAATGGCCCAGAGACTTGGAGAAGGAATAGTTGCCTCCGCCGCACAGCACCCAGCACCCTGAGGCGCTCAGAGTTCGTGCAAAACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS CCA 90 bp GGGTTTTCTTGCTGTTTTGCACGAACTCTGAGCGCCTCAGGGTGCTaGGTGCTGTGCGGCGGAGGCAACTATTCCTTCTCCAAGTCTCTG +
Preference number: 5 (lower is better)
Translates to: GFSCCFARTLSASGC*VLCGGGNYSFSKSL
Trigger: CAGAGACTTGGAGAAGGAATAGTTGCCTCCGCCGCACAGCACCCAGCACCCTGAGGCGCTCAGAGTTCGTGCAAAACAGCAAGAAAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS-3UTR CAA 90 bp TGTGGTGTGCTCCACCATGCCATGGTTAAGCAACGCAGACAGGGCCTGTGTCTCTCACCCTTACGGTACTaGAGGACCAGGTCCTTTCGC +
Preference number: 5 (lower is better)
Translates to: CGVLHHAMVKQRRQGLCLSPLRY*RTRSFR
Trigger: GCGAAAGGACCTGGTCCTCAAGTACCGTAAGGGTGA...GAGACACAGGCCCTGTCTGCGTTGCTTAACCATGGCATGGTGGAGCACACCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp CTCTCGGTGGGCCGCCAGAACCCTCGGCGGACTGAAAGCAAAGGCAGCAAGGCTACTCGGTTGGATTTCTaGATGATGGAGTGGATGTTC +
Preference number: 5 (lower is better)
Translates to: LSVGRQNPRRTESKGSKATRLDF*MMEWMF
Trigger: GAACATCCACTCCATCATCAAGAAATCCAACCGAGT...AGCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGGGTTCTGGCGGCCCACCGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp CAAGGTTTACAACCCAATCGAGGAGAACAAGATCTGTGGTGTGCTCCACCATGCGCCATGCTGCTGGGGTaGAAGGTCAGGGTGCTGCCG +
Preference number: 5 (lower is better)
Translates to: QGLQPNRGEQDLWCAPPCAMLLG*KVRVLP
Trigger: CGGCAGCACCCTGACCTTCAACCCCAGCAGCATGGC...GCATGGTGGAGCACACCACAGATCTTGTTCTCCTCGATTGGGTTGTAAACCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS GCA 90 bp TGTTCTCCAAACAATCCAAAGAAGTTTCCGGGATCCTGGCAAGGCTaGCTTCCTGGGGCAGAGCCATGGTTTCCTCCACCCGTGTGTCAG +
Preference number: 5 (lower is better)
Translates to: CSPNNPKKFPGSWQG*LPGAEPWFPPPVCQ
Trigger: CTGACACACGGGTGGAGGAAACCATGGCTCTGCCCCAGGAAGGCAGCCTTGCCAGGATCCCGGAAACTTCTTTGGATTGTTTGGAGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS GCA 90 bp CGAGGTGGCGGTGGCCTTAGGGCCTTTCTCCTTTCCGGCAGCTCCTaGTCGGTGATTAACTTTGAGGAACCTCGGACAATATCCTTCTCA +
Preference number: 5 (lower is better)
Translates to: RGGGGLRAFLLSGSS*SVINFEEPRTISFS
Trigger: TGAGAAGGATATTGTCCGAGGTTCCTCAAAGTTAATCACCGAGCAGGAGCTGCCGGAAAGGAGAAAGGCCCTAAGGCCACCGCCACCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS GCA 90 bp CTTGGGTTTTCTTGCTGTTTTGCACGAACTCTGAGCGCCTCAGGGTaGTGGGTGCTGTGCGGCGGAGGCAACTATTCCTTCTCCAAGTCT +
Preference number: 5 (lower is better)
Translates to: LGFSCCFARTLSASG*WVLCGGGNYSFSKS
Trigger: AGACTTGGAGAAGGAATAGTTGCCTCCGCCGCACAGCACCCAGCACCCTGAGGCGCTCAGAGTTCGTGCAAAACAGCAAGAAAACCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS CCA 90 bp AAGTTTCCGGGATCCTGGCAAGGCTGCCTTCCTGGGGCAGAGCCATaGTTTCCTCCACCCGTGTGTCAGGACATAATTTCACAAACCGGT +
Preference number: 5 (lower is better)
Translates to: KFPGSWQGCLPGAEP*FPPPVCQDIISQTG
Trigger: ACCGGTTTGTGAAATTATGTCCTGACACACGGGTGGAGGAAACCATGGCTCTGCCCCAGGAAGGCAGCCTTGCCAGGATCCCGGAAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS CCA 90 bp CTCCTAAGGTGTTCTCCAAACAATCCAAAGAAGTTTCCGGGATCCTaGCAAGGCTGCCTTCCTGGGGCAGAGCCATGGTTTCCTCCACCC +
Preference number: 5 (lower is better)
Translates to: LLRCSPNNPKKFPGS*QGCLPGAEPWFPPP
Trigger: GGGTGGAGGAAACCATGGCTCTGCCCCAGGAAGGCAGCCTTGCCAGGATCCCGGAAACTTCTTTGGATTGTTTGGAGAACACCTTAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS CCA 90 bp ACGAGCTCTGAGGAATCCCCAAATGATGTCCTCCTTGTTCTCCCCTaGTACACTGAGTCTGCAGACCATCCAGAAGGATCCTGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: TSSEESPNDVLLVLP*YTESADHPEGSCCP
Trigger: GGGGCAGCAGGATCCTTCTGGATGGTCTGCAGACTCAGTGTACCAGGGGAGAACAAGGAGGACATCATTTGGGGATTCCTCAGAGCTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS-3UTR CAA 90 bp TTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCAGCCATGTGCAAGCAGCCATGCTGCTGGGGTaGAAGGTCAGGGTGCTGCCG +
Preference number: 5 (lower is better)
Translates to: FEALGLVQSRQTPSHVQAAMLLG*KVRVLP
Trigger: CGGCAGCACCCTGACCTTCAACCCCAGCAGCATGGC...TGCTTGCACATGGCTGGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS TCA 90 bp ATGGTGATCACATCCCCTTCCCTGAAGTCCAGCTCTTCATCCAGCTaGGCAGAAAGCCCCATTAGGGCCCGGGCTTGTCCCATGGAATAT +
Preference number: 5 (lower is better)
Translates to: MVITSPSLKSSSSSS*AESPIRARACPMEY
Trigger: ATATTCCATGGGACAAGCCCGGGCCCTAATGGGGCTTTCTGCTCAGCTGGATGAAGAGCTGGACTTCAGGGAAGGGGATGTGATCACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS TCA 90 bp GCCCATTTCGTCCTGGTACGGAGTAGCCAACTATTTCTGGATGCCTaGAGTTCCGGTAGCTCCTCGGCGTGGCAGTGGGTTGCTTTACAT +
Preference number: 5 (lower is better)
Translates to: AHFVLVRSSQLFLDA*SSGSSSAWQWVALH
Trigger: ATGTAAAGCAACCCACTGCCACGCCGAGGAGCTACCGGAACTTCAGGCATCCAGAAATAGTTGGCTACTCCGTACCAGGACGAAATGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS GCA 90 bp GCCATCTGGCTCTGTACTTCTGTCTTCCGGAGCCTGGGCTGTTCTTaGACATCCTTTGACGAGGTCTTGACTTTGCCCATTTCGTCCTGG +
Preference number: 5 (lower is better)
Translates to: AIWLCTSVFRSLGCS*TSFDEVLTLPISSW
Trigger: CCAGGACGAAATGGGCAAAGTCAAGACCTCGTCAAAGGATGTGCAAGAACAGCCCAGGCTCCGGAAGACAGAAGTACAGAGCCAGATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS CCA 90 bp CTGCCGTCTCCCTGTGAATGTGTTGCTGCTTCCATAACAAGCCCTTaGGCTTGCGGACCAGGCTTCATCTCCAATCTCTCTGAGATGGAG +
Preference number: 5 (lower is better)
Translates to: LPSPCECVAASITSP*ACGPGFISNLSEME
Trigger: CTCCATCTCAGAGAGATTGGAGATGAAGCCTGGTCCGCAAGCCCAAGGGCTTGTTATGGAAGCAGCAACACATTCACAGGGAGACGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS CCA 90 bp TTGACTTTGCCCATTTCGTCCTGGTACGGAGTAGCCAACTATTTCTaGATGCCTGAAGTTCCGGTAGCTCCTCGGCGTGGCAGTGGGTTG +
Preference number: 5 (lower is better)
Translates to: LTLPISSWYGVANYF*MPEVPVAPRRGSGL
Trigger: CAACCCACTGCCACGCCGAGGAGCTACCGGAACTTCAGGCATCCAGAAATAGTTGGCTACTCCGTACCAGGACGAAATGGGCAAAGTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp AGCATGGAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACACTCTCTGTACTGGTTaGATGAGGAAGGAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: SMEHGATPNAVQHNHYQHTLCTG*MRKEPR
Trigger: CCTGGGCTCCTTCCTCATCAAACCAGTACAGAGAGT...GTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTCCATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp TGTGGTGTGCTCCACCATGCCATGGTTAAGCAACGCAGACAGGGCCTGTGTCTCGGTAAAAACCTGGAGTaGCTGCAGAACTCTGCTGTG +
Preference number: 5 (lower is better)
Translates to: CGVLHHAMVKQRRQGLCLGKNLE*LQNSAV
Trigger: CACAGCAGAGTTCTGCAGCAACTCCAGGTTTTTACC...GAGACACAGGCCCTGTCTGCGTTGCTTAACCATGGCATGGTGGAGCACACCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp TGTGTAAAGACCATCAGAAAGGTGTCATTGAGGTTGCGGTATGGTGGCTTACACGCCATGCTGCTGGGGTaGAAGGTCAGGGTGCTGCCG +
Preference number: 5 (lower is better)
Translates to: CVKTIRKVSLRLRYGGLHAMLLG*KVRVLP
Trigger: CGGCAGCACCCTGACCTTCAACCCCAGCAGCATGGC...GTGTAAGCCACCATACCGCAACCTCAATGACACCTTTCTGATGGTCTTTACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp TTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCAGCCATGTGCAAGCACAGAGTCCCCTGACCTaGGCTGGGAGGTGGAGTCTG +
Preference number: 5 (lower is better)
Translates to: FEALGLVQSRQTPSHVQAQSPLT*AGRWSL
Trigger: CAGACTCCACCTCCCAGCCAAGGTCAGGGGACTCTG...TGCTTGCACATGGCTGGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp TGTGGTGTGCTCCACCATGCCATGGTTAAGCAACGCAGACAGGGCCTGTGTCTCTCCTTTGACGAGGTCTaGACTTTGCCCATTTCGTCC +
Preference number: 5 (lower is better)
Translates to: CGVLHHAMVKQRRQGLCLSFDEV*TLPISS
Trigger: GGACGAAATGGGCAAAGTCAAGACCTCGTCAAAGGA...GAGACACAGGCCCTGTCTGCGTTGCTTAACCATGGCATGGTGGAGCACACCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS GCA 90 bp TCGTGCCTTGAAGGTGTAGACAGCAAAATAGACCTGGTTGCCTTCTaGCTCACTGCCATCTGGCTCTGTACTTCTGTCTTCCGGAGCCTG +
Preference number: 5 (lower is better)
Translates to: SCLEGVDSKIDLVAF*LTAIWLCTSVFRSL
Trigger: CAGGCTCCGGAAGACAGAAGTACAGAGCCAGATGGCAGTGAGGCAGAAGGCAACCAGGTCTATTTTGCTGTCTACACCTTCAAGGCACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS CCA 90 bp AAACAATCCAAAGAAGTTTCCGGGATCCTGGCAAGGCTGCCTTCCTaGGGCAGAGCCATGGTTTCCTCCACCCGTGTGTCAGGACATAAT +
Preference number: 5 (lower is better)
Translates to: KQSKEVSGILARLPS*GRAMVSSTRVSGHN
Trigger: ATTATGTCCTGACACACGGGTGGAGGAAACCATGGCTCTGCCCCAGGAAGGCAGCCTTGCCAGGATCCCGGAAACTTCTTTGGATTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS CCA 90 bp GTAGACAGCAAAATAGACCTGGTTGCCTTCTGCCTCACTGCCATCTaGCTCTGTACTTCTGTCTTCCGGAGCCTGGGCTGTTCTTGCACA +
Preference number: 5 (lower is better)
Translates to: VDSKIDLVAFCLTAI*LCTSVFRSLGCSCT
Trigger: TGTGCAAGAACAGCCCAGGCTCCGGAAGACAGAAGTACAGAGCCAGATGGCAGTGAGGCAGAAGGCAACCAGGTCTATTTTGCTGTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp GAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACTGTCTAACTCTCTGTACTGGTTaGATGAGGAAGGAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: EHGATPNAVQHNHYQHCLTLCTG*MRKEPR
Trigger: CCTGGGCTCCTTCCTCATCAAACCAGTACAGAGAGT...TAGACAGTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp ACACTCTTCACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGAGCGTACTGGTGGAACTaGGGCAGCTCATCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: TLFTKGLLHYCLLTTTSRAYWWN*GSSSSS
Trigger: GCTGCTGGATGAGCTGCCCAAGTTCCACCAGTACGC...TCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTGAAGAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp AGCATGGAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACTGCACTGAGAGTTCCTaGGTCACATTCTTTTGGCGG +
Preference number: 5 (lower is better)
Translates to: SMEHGATPNAVQHNHYQHCTESS*VTFFWR
Trigger: CCGCCAAAAGAATGTGACCAAGGAACTCTCAGTGCA...GTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTCCATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS GCA 90 bp TCCGGGAAGAAGGTAAAAACCTGGAGTTGCTGCAGAACTCTGCTGTaGTCTTCGTGGAAGATGGCAATAAGGTTTCCCTCTCTGCCAGCC +
Preference number: 5 (lower is better)
Translates to: SGKKVKTWSCCRTLL*SSWKMAIRFPSLPA
Trigger: GGCTGGCAGAGAGGGAAACCTTATTGCCATCTTCCACGAAGAGCACAGCAGAGTTCTGCAGCAACTCCAGGTTTTTACCTTCTTCCCGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS GCA 90 bp GGATGCACTGAGAGTTCCTTGGTCACATTCTTTTGGCGGAGGAGATaGATCTTGAGGCTGCTTCTGGCAAGACCCCGAGGTAAAGGATAC +
Preference number: 5 (lower is better)
Translates to: GCTESSLVTFFWRRR*ILRLLLARPRGKGY
Trigger: GTATCCTTTACCTCGGGGTCTTGCCAGAAGCAGCCTCAAGATGCATCTCCTCCGCCAAAAGAATGTGACCAAGGAACTCTCAGTGCATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS CCA 90 bp GGCTTCTTGGTAGCTGGAAGAGACTCCGGGAAGAAGGTAAAAACCTaGAGTTGCTGCAGAACTCTGCTGTGCTCTTCGTGGAAGATGGCA +
Preference number: 5 (lower is better)
Translates to: GFLVAGRDSGKKVKT*SCCRTLLCSSWKMA
Trigger: TGCCATCTTCCACGAAGAGCACAGCAGAGTTCTGCAGCAACTCCAGGTTTTTACCTTCTTCCCGGAGTCTCTTCCAGCTACCAAGAAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS CCA 90 bp TCCCACATGCTCACAGCAGCCACCACTTTCACACATGCGGACTCCTaGAGCCAGTTAGGACAGACACAAGTCAGAACAGACAGAACTTTC +
Preference number: 5 (lower is better)
Translates to: SHMLTAATTFTHADS*SQLGQTQVRTDRTF
Trigger: GAAAGTTCTGTCTGTTCTGACTTGTGTCTGTCCTAACTGGCTCCAGGAGTCCGCATGTGTGAAAGTGGTGGCTGCTGTGAGCATGTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472036.1
CDS-3UTR CAA 90 bp ACCAGACATCACAGACTGTGTAAAGACCATCAGAAAGGTGTCATTGAGGTTGCGGCGTACTGGTGGAACTaGGGCAGCTCATCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: TRHHRLCKDHQKGVIEVAAYWWN*GSSSSS
Trigger: GCTGCTGGATGAGCTGCCCAAGTTCCACCAGTACGC...CGCAACCTCAATGACACCTTTCTGATGGTCTTTACACAGTCTGTGATGTCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp AGCCATGAATTCTTTTCATCTGAGTTGGCATCCGGTCAGCTGAGCATGGAACATGCGTACTGGTGGAACTaGGGCAGCTCATCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: SHEFFSSELASGQLSMEHAYWWN*GSSSSS
Trigger: GCTGCTGGATGAGCTGCCCAAGTTCCACCAGTACGC...ATGTTCCATGCTCAGCTGACCGGATGCCAACTCAGATGAAAAGAATTCATGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp GAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACTGTCTAATCAGAAAGGTGTCATaGAGGTTGCGGTATGGTGGC +
Preference number: 5 (lower is better)
Translates to: EHGATPNAVQHNHYQHCLIRKVS*RLRYGG
Trigger: GCCACCATACCGCAACCTCAATGACACCTTTCTGAT...TAGACAGTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS TCA 90 bp GTTCATGCTGTCGCCATCTCAAAGACAACTGTCCTGCCATGTTACTaGTCCTCAAAACCTGGTTTCCCATCCGACCCTGGCACTCCCAAT +
Preference number: 5 (lower is better)
Translates to: VHAVAISKTTVLPCY*SSKPGFPSDPGTPN
Trigger: ATTGGGAGTGCCAGGGTCGGATGGGAAACCAGGTTTTGAGGATCAGTAACATGGCAGGACAGTTGTCTTTGAGATGGCGACAGCATGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472036.1
CDS GCA 90 bp CTGGGCTGTGGACAGGTGCAGTCTAGCCTAAGGCTGGATTTGTCCTaGTTAAAATGTCTCCCAACCATTCCAGACACTCTTCTCGTTGCT +
Preference number: 5 (lower is better)
Translates to: LGCGQVQSSLRLDLS*LKCLPTIPDTLLVA
Trigger: AGCAACGAGAAGAGTGTCTGGAATGGTTGGGAGACATTTTAAGCAGGACAAATCCAGCCTTAGGCTAGACTGCACCTGTCCACAGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS CCA 90 bp TCCTTGACCGCAAGGACTGCATTGGTTAAAGGCACTTTATCTGGGTaGGATTCTGGGGTGGAATTCAGCAACTCCATTAGCAACAGCGGG +
Preference number: 5 (lower is better)
Translates to: SLTARTALVKGTLSG*DSGVEFSNSISNSG
Trigger: CCCGCTGTTGCTAATGGAGTTGCTGAATTCCACCCCAGAATCCCACCCAGATAAAGTGCCTTTAACCAATGCAGTCCTTGCGGTCAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp AGCATGGAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACTGGGAGGAAATACCATaGACTACTTCTGTAGGGTCA +
Preference number: 5 (lower is better)
Translates to: SMEHGATPNAVQHNHYQHWEEIP*TTSVGS
Trigger: TGACCCTACAGAAGTAGTCAATGGTATTTCCTCCCA...GTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTCCATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR CAA 90 bp TTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCAGCCATGTGCAAGCATTCCATAACAAGCCCTaGGGCTTGCGGACCAGGCTT +
Preference number: 5 (lower is better)
Translates to: FEALGLVQSRQTPSHVQAFHNKP*GLRTRL
Trigger: AAGCCTGGTCCGCAAGCCCAAGGGCTTGTTATGGAA...TGCTTGCACATGGCTGGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR CAA 90 bp GAACATGGGGCCACCCCAAACGCCGTACAGCACAACCATTACCAACACTGTCTAAGTTCTTCTATGACCTaGGCTCTCTTCTCCAGCATC +
Preference number: 5 (lower is better)
Translates to: EHGATPNAVQHNHYQHCLSSSMT*ALFSSI
Trigger: GATGCTGGAGAAGAGAGCCAAGGTCATAGAAGAACT...TAGACAGTGTTGGTAATGGTTGTGCTGTACGGCGTTTGGGGTGGCCCCATGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp TCCCAGGATTTTAAGGCTAAATGTGCACTTGGAGGAACAGGGGCTGTAAGGCTATCACCCTTACGGTACTaGAGGACCAGGTCCTTTCGC +
Preference number: 5 (lower is better)
Translates to: SQDFKAKCALGGTGAVRLSPLRY*RTRSFR
Trigger: GCGAAAGGACCTGGTCCTCAAGTACCGTAAGGGTGA...TAGCCTTACAGCCCCTGTTCCTCCAAGTGCACATTTAGCCTTAAAATCCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp CAAGGTTTACAACCCAATCGAGGAGAACAAGATCTGTGGTGTGCTCCACCATGCTCTCTGCCAGCCACTTaGAGTAACGAAAGCAGTGGC +
Preference number: 5 (lower is better)
Translates to: QGLQPNRGEQDLWCAPPCSLPAT*SNESSG
Trigger: GCCACTGCTTTCGTTACTCAAAGTGGCTGGCAGAGA...GCATGGTGGAGCACACCACAGATCTTGTTCTCCTCGATTGGGTTGTAAACCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp AGGTGTCCCAGGAGCTTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCGGTAAAAACCTGGAGTaGCTGCAGAACTCTGCTGTG +
Preference number: 5 (lower is better)
Translates to: RCPRSFEALGLVQSRQTPGKNLE*LQNSAV
Trigger: CACAGCAGAGTTCTGCAGCAACTCCAGGTTTTTACC...GGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAAGCTCCTGGGACACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp AGGTGTCCCAGGAGCTTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCCTCTCAAATGGCTTCTaGGTAGCTGGAAGAGACTCC +
Preference number: 5 (lower is better)
Translates to: RCPRSFEALGLVQSRQTPLSNGF*VAGRDS
Trigger: GGAGTCTCTTCCAGCTACCAAGAAGCCATTTGAGAG...GGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAAGCTCCTGGGACACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp ACACTCTTCACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGAACTGTAGCATGTAACTaGGCAGGCCCAGGAGTGGCT +
Preference number: 5 (lower is better)
Translates to: TLFTKGLLHYCLLTTTSRTVACN*AGPGVA
Trigger: AGCCACTCCTGGGCCTGCCAAGTTACATGCTACAGT...TCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTGAAGAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp TTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCAGCCATGTGCAAGCACGGCGTGGCAGTGGGTaGCTTTACATCTCTAGCTAC +
Preference number: 5 (lower is better)
Translates to: FEALGLVQSRQTPSHVQARRGSG*LYISSY
Trigger: GTAGCTAGAGATGTAAAGCAACCCACTGCCACGCCG...TGCTTGCACATGGCTGGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp CAAGGTTTACAACCCAATCGAGGAGAACAAGATCTGTGGTGTGCTCCACCATGCGACGAGGTCTTGACTTaGCCCATTTCGTCCTGGTAC +
Preference number: 5 (lower is better)
Translates to: QGLQPNRGEQDLWCAPPCDEVLT*PISSWY
Trigger: GTACCAGGACGAAATGGGCAAAGTCAAGACCTCGTC...GCATGGTGGAGCACACCACAGATCTTGTTCTCCTCGATTGGGTTGTAAACCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp GACTCCACGGTGTCTCCCGACTCCCAGGATTTTAAGGCTAAATGTGCACTTGGATTCTTTTCATCTGAGTaGGCATCCGGTCAGCTGAGC +
Preference number: 5 (lower is better)
Translates to: DSTVSPDSQDFKAKCALGFFSSE*ASGQLS
Trigger: GCTCAGCTGACCGGATGCCAACTCAGATGAAAAGAA...TCCAAGTGCACATTTAGCCTTAAAATCCTGGGAGTCGGGAGACACCGTGGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS TCA 90 bp GTTTCTGATTGGCTGACACGCTCAGCTCATTTGGGTTTCGTGCCTTaGAGGTGTAGACAGCAAAATAGACCTGGTTGCCTTCTGCCTCAC +
Preference number: 5 (lower is better)
Translates to: VSDWLTRSAHLGFVP*RCRQQNRPGCLLPH
Trigger: GTGAGGCAGAAGGCAACCAGGTCTATTTTGCTGTCTACACCTTCAAGGCACGAAACCCAAATGAGCTGAGCGTGTCAGCCAATCAGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS TCA 90 bp CCAACCATTCCAGACACTCTTCTCGTTGCTCTAGTCGGAGCGCAGTaGGATGTGGAGTTATTTCAACCTCAGGATCCAATCAGCGAGCTA +
Preference number: 5 (lower is better)
Translates to: PTIPDTLLVALVGAQ*DVELFQPQDPISEL
Trigger: TAGCTCGCTGATTGGATCCTGAGGTTGAAATAACTCCACATCTCACTGCGCTCCGACTAGAGCAACGAGAAGAGTGTCTGGAATGGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS TCA 90 bp CCCGTATCCACCAGCTTTCGAGGTCACATCTGGGCTTCTCGTAGGTaGATTATCCTTCGTCCCAGGGCTGAGACTCTCATAATCTACATT +
Preference number: 5 (lower is better)
Translates to: PVSTSFRGHIWASRR*IILRPRAETLIIYI
Trigger: AATGTAGATTATGAGAGTCTCAGCCCTGGGACGAAGGATAATTCACCTACGAGAAGCCCAGATGTGACCTCGAAAGCTGGTGGATACGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS GCA 90 bp TTGGTAGCTGGAAGAGACTCCGGGAAGAAGGTAAAAACCTGGAGTTaGTGCAGAACTCTGCTGTGCTCTTCGTGGAAGATGGCAATAAGG +
Preference number: 5 (lower is better)
Translates to: LVAGRDSGKKVKTWS*CRTLLCSSWKMAIR
Trigger: CCTTATTGCCATCTTCCACGAAGAGCACAGCAGAGTTCTGCAGCAACTCCAGGTTTTTACCTTCTTCCCGGAGTCTCTTCCAGCTACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS GCA 90 bp CTCAAGTCTTGGTTCATGCTGTCGCCATCTCAAAGACAACTGTCCTaGCATGTTACTGATCCTCAAAACCTGGTTTCCCATCCGACCCTG +
Preference number: 5 (lower is better)
Translates to: LKSWFMLSPSQRQLS*HVTDPQNLVSHPTL
Trigger: CAGGGTCGGATGGGAAACCAGGTTTTGAGGATCAGTAACATGGCAGGACAGTTGTCTTTGAGATGGCGACAGCATGAACCAAGACTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472036.1
CDS CCA 90 bp AGACTGGCGGTCAATGGTTTTCCTCTCAAATGGCTTCTTGGTAGCTaGAAGAGACTCCGGGAAGAAGGTAAAAACCTGGAGTTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: RLAVNGFPLKWLLGS*KRLREEGKNLELLQ
Trigger: CTGCAGCAACTCCAGGTTTTTACCTTCTTCCCGGAGTCTCTTCCAGCTACCAAGAAGCCATTTGAGAGGAAAACCATTGACCGCCAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS CCA 90 bp GAGTGGCTTTCGAGCAGACTGGCGGTCAATGGTTTTCCTCTCAAATaGCTTCTTGGTAGCTGGAAGAGACTCCGGGAAGAAGGTAAAAAC +
Preference number: 5 (lower is better)
Translates to: EWLSSRLAVNGFPLK*LLGSWKRLREEGKN
Trigger: GTTTTTACCTTCTTCCCGGAGTCTCTTCCAGCTACCAAGAAGCCATTTGAGAGGAAAACCATTGACCGCCAGTCTGCTCGAAAGCCACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS CCA 90 bp CCCAGTATCCACAATCCCTTTTTCTGTAGGGCTGATGCTGTCCCTTaGCCCAGTACCTGGGATCCAAGTCATTTTCTCTGTAGAGTCCAT +
Preference number: 5 (lower is better)
Translates to: PSIHNPFFCRADAVP*PSTWDPSHFLCRVH
Trigger: ATGGACTCTACAGAGAAAATGACTTGGATCCCAGGTACTGGGCCAAGGGACAGCATCAGCCCTACAGAAAAAGGGATTGTGGATACTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS-3UTR CAA 90 bp CTTCCTGCATACATAGGACACTGGGCTTCTGACTGCAAGTTTCTCCTTTCCAAAATTTGGCTCCAGGGCTaGGAATCTGTACAGGGCGAC +
Preference number: 5 (lower is better)
Translates to: LPAYIGHWASDCKFLLSKIWLQG*ESVQGD
Trigger: GTCGCCCTGTACAGATTCCAAGCCCTGGAGCCAAAT...TTTGGAAAGGAGAAACTTGCAGTCAGAAGCCCAGTGTCCTATGTATGCAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR CAA 90 bp CAAGGTTTACAACCCAATCGAGGAGAACAAGATCTGTGGTGTGCTCCACCATGCCGAGGGTCTCTGCTCTaGATGATTCATCCTGCTTCT +
Preference number: 5 (lower is better)
Translates to: QGLQPNRGEQDLWCAPPCRGSLL*MIHPAS
Trigger: AGAAGCAGGATGAATCATCAAGAGCAGAGACCCTCG...GCATGGTGGAGCACACCACAGATCTTGTTCTCCTCGATTGGGTTGTAAACCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR CAA 90 bp ACACTCTTCACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGATCTCTGCCAGCCACTTaGAGTAACGAAAGCAGTGGC +
Preference number: 5 (lower is better)
Translates to: TLFTKGLLHYCLLTTTSRSLPAT*SNESSG
Trigger: GCCACTGCTTTCGTTACTCAAAGTGGCTGGCAGAGA...TCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTGAAGAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp TCCCAGGATTTTAAGGCTAAATGTGCACTTGGAGGAACAGGGGCTGTAAGGCTACCTTTGGTGACTCCATaGTCAATCAGCCAGCGGTTC +
Preference number: 5 (lower is better)
Translates to: SQDFKAKCALGGTGAVRLPLVTP*SISQRF
Trigger: GAACCGCTGGCTGATTGACAATGGAGTCACCAAAGG...TAGCCTTACAGCCCCTGTTCCTCCAAGTGCACATTTAGCCTTAAAATCCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp GACTCCACGGTGTCTCCCGACTCCCAGGATTTTAAGGCTAAATGTGCACTTGGACTGTACACGAAGCCTTaGGTGACTCCATTGTCAATC +
Preference number: 5 (lower is better)
Translates to: DSTVSPDSQDFKAKCALGLYTKP*VTPLSI
Trigger: GATTGACAATGGAGTCACCAAAGGCTTCGTGTACAG...TCCAAGTGCACATTTAGCCTTAAAATCCTGGGAGTCGGGAGACACCGTGGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp CACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGACACTGTGGCTTGGTCACATTCTTTaGGCGGAGGAGATGCATCTT +
Preference number: 5 (lower is better)
Translates to: HKRTLALLPSDHDQQTLWLGHIL*AEEMHL
Trigger: AAGATGCATCTCCTCCGCCAAAAGAATGTGACCAAG...CCACAGTGTCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp AAAGCCCCAGGGTCCATTTCAAATTCTAGAGATTCTAGTGAGCATCAAGGTTTACAGAGTCCCCTGACCTaGGCTGGGAGGTGGAGTCTG +
Preference number: 5 (lower is better)
Translates to: KAPGSISNSRDSSEHQGLQSPLT*AGRWSL
Trigger: CAGACTCCACCTCCCAGCCAAGGTCAGGGGACTCTG...TAAACCTTGATGCTCACTAGAATCTCTAGAATTTGAAATGGACCCTGGGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp TGTGTAAAGACCATCAGAAAGGTGTCATTGAGGTTGCGGTATGGTGGCTTACACCGGCGTGGCAGTGGGTaGCTTTACATCTCTAGCTAC +
Preference number: 5 (lower is better)
Translates to: CVKTIRKVSLRLRYGGLHRRGSG*LYISSY
Trigger: GTAGCTAGAGATGTAAAGCAACCCACTGCCACGCCG...GTGTAAGCCACCATACCGCAACCTCAATGACACCTTTCTGATGGTCTTTACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp ACACTCTTCACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGAGACGAGGTCTTGACTTaGCCCATTTCGTCCTGGTAC +
Preference number: 5 (lower is better)
Translates to: TLFTKGLLHYCLLTTTSRDEVLT*PISSWY
Trigger: GTACCAGGACGAAATGGGCAAAGTCAAGACCTCGTC...TCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTGAAGAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp AGCCATGAATTCTTTTCATCTGAGTTGGCATCCGGTCAGCTGAGCATGGAACATAGTCTGAGTAGCCATTaGCCTCCCCGTATCCACCAG +
Preference number: 5 (lower is better)
Translates to: SHEFFSSELASGQLSMEHSLSSH*PPRIHQ
Trigger: CTGGTGGATACGGGGAGGCAAATGGCTACTCAGACT...ATGTTCCATGCTCAGCTGACCGGATGCCAACTCAGATGAAAAGAATTCATGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS TCA 90 bp CGAGGGTCTCTGCTCTTGATGATTCATCCTGCTTCTCCTCCAGCATaGGGTTTAGCTCTTCTTGAGCTCTACTGTACATATCCAAGTCCC +
Preference number: 5 (lower is better)
Translates to: RGSLLLMIHPASPPA*GLALLELYCTYPSP
Trigger: GGGACTTGGATATGTACAGTAGAGCTCAAGAAGAGCTAAACCTCATGCTGGAGGAGAAGCAGGATGAATCATCAAGAGCAGAGACCCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS TCA 90 bp ATCACACCCACCAGGTCACCTTCCAAAAGTGAGACATCCAAGTCTTaGGCAGCATTGAAGTTCCGTTCTGCCTGGAAGAGTTTTTCAGGG +
Preference number: 5 (lower is better)
Translates to: ITPTRSPSKSETSKS*AALKFRSAWKSFSG
Trigger: CCCTGAAAAACTCTTCCAGGCAGAACGGAACTTCAATGCTGCTCAAGACTTGGATGTCTCACTTTTGGAAGGTGACCTGGTGGGTGTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS GCA 90 bp GTAGCTGGAAGAGACTCCGGGAAGAAGGTAAAAACCTGGAGTTGCTaGAGAACTCTGCTGTGCTCTTCGTGGAAGATGGCAATAAGGTTT +
Preference number: 5 (lower is better)
Translates to: VAGRDSGKKVKTWSC*RTLLCSSWKMAIRF
Trigger: AAACCTTATTGCCATCTTCCACGAAGAGCACAGCAGAGTTCTGCAGCAACTCCAGGTTTTTACCTTCTTCCCGGAGTCTCTTCCAGCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS GCA 90 bp ACACTGAGTCTGCAGACCATCCAGAAGGATCCTGCTGCCCCCATGTaGCTTTGTTCTTGGTATGTCAGTGCCATTATACTCCAAATTCTC +
Preference number: 5 (lower is better)
Translates to: TLSLQTIQKDPAAPM*LCSWYVSAIILQIL
Trigger: GAGAATTTGGAGTATAATGGCACTGACATACCAAGAACAAAGGCACATGGGGGCAGCAGGATCCTTCTGGATGGTCTGCAGACTCAGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS CCA 90 bp GAAGTGGGTGCTTCAGAAATAATGCAGTCAGGCTCCTCGGCCTCATaGTCACTGGTTTCATGTCTTTGTTCCTCTACTCCTAAGGTGTTC +
Preference number: 5 (lower is better)
Translates to: EVGASEIMQSGSSAS*SLVSCLCSSTPKVF
Trigger: GAACACCTTAGGAGTAGAGGAACAAAGACATGAAACCAGTGACCATGAGGCCGAGGAGCCTGACTGCATTATTTCTGAAGCACCCACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS CCA 90 bp AAGGTAAAAACCTGGAGTTGCTGCAGAACTCTGCTGTGCTCTTCGTaGAAGATGGCAATAAGGTTTCCCTCTCTGCCAGCCACTTTGAGT +
Preference number: 5 (lower is better)
Translates to: KVKTWSCCRTLLCSS*KMAIRFPSLPATLS
Trigger: ACTCAAAGTGGCTGGCAGAGAGGGAAACCTTATTGCCATCTTCCACGAAGAGCACAGCAGAGTTCTGCAGCAACTCCAGGTTTTTACCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS CCA 90 bp TCTTGCACATCCTTTGACGAGGTCTTGACTTTGCCCATTTCGTCCTaGTACGGAGTAGCCAACTATTTCTGGATGCCTGAAGTTCCGGTA +
Preference number: 5 (lower is better)
Translates to: SCTSFDEVLTLPISS*YGVANYFWMPEVPV
Trigger: TACCGGAACTTCAGGCATCCAGAAATAGTTGGCTACTCCGTACCAGGACGAAATGGGCAAAGTCAAGACCTCGTCAAAGGATGTGCAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp ACACTCTTCACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGAAAACTCGATCAGCTGTaGTGTCAGCTTCGAGTCCAG +
Preference number: 5 (lower is better)
Translates to: TLFTKGLLHYCLLTTTSRKLDQL*CQLRVQ
Trigger: CTGGACTCGAAGCTGACACAACAGCTGATCGAGTTT...TCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTGAAGAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR CAA 90 bp TGTGTAAAGACCATCAGAAAGGTGTCATTGAGGTTGCGGTATGGTGGCTTACACACTCTCTGTACTGGTTaGATGAGGAAGGAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: CVKTIRKVSLRLRYGGLHTLCTG*MRKEPR
Trigger: CCTGGGCTCCTTCCTCATCAAACCAGTACAGAGAGT...GTGTAAGCCACCATACCGCAACCTCAATGACACCTTTCTGATGGTCTTTACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp CACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGACACTGTGGTTAACGTTGATTTCCTaGACCGCAAGGACTGCATTG +
Preference number: 5 (lower is better)
Translates to: HKRTLALLPSDHDQQTLWLTLIS*TARTAL
Trigger: CAATGCAGTCCTTGCGGTCAAGGAAATCAACGTTAA...CCACAGTGTCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp AGTGAGCATCAAGGTTTACAACCCAATCGAGGAGAACAAGATCTGTGGTGTGCTTCTCTGCCAGCCACTTaGAGTAACGAAAGCAGTGGC +
Preference number: 5 (lower is better)
Translates to: SEHQGLQPNRGEQDLWCASLPAT*SNESSG
Trigger: GCCACTGCTTTCGTTACTCAAAGTGGCTGGCAGAGA...AGCACACCACAGATCTTGTTCTCCTCGATTGGGTTGTAAACCTTGATGCTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp TTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCAGCCATGTGCAAGCATGCACTGAGAGTTCCTaGGTCACATTCTTTTGGCGG +
Preference number: 5 (lower is better)
Translates to: FEALGLVQSRQTPSHVQACTESS*VTFFWR
Trigger: CCGCCAAAAGAATGTGACCAAGGAACTCTCAGTGCA...TGCTTGCACATGGCTGGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp TTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCAGCCATGTGCAAGCAATCAGAAAGGTGTCATaGAGGTTGCGGTATGGTGGC +
Preference number: 5 (lower is better)
Translates to: FEALGLVQSRQTPSHVQAIRKVS*RLRYGG
Trigger: GCCACCATACCGCAACCTCAATGACACCTTTCTGAT...TGCTTGCACATGGCTGGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp GACTCCACGGTGTCTCCCGACTCCCAGGATTTTAAGGCTAAATGTGCACTTGGATTCACAAAAGGACTCTaGCATTACTGCCTTCTGACC +
Preference number: 5 (lower is better)
Translates to: DSTVSPDSQDFKAKCALGFTKGL*HYCLLT
Trigger: GGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTGAA...TCCAAGTGCACATTTAGCCTTAAAATCCTGGGAGTCGGGAGACACCGTGGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp AGGTGTCCCAGGAGCTTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCGAGGAGCGTCATTTCTaGGGTTTTCTTGCTGTTTTG +
Preference number: 5 (lower is better)
Translates to: RCPRSFEALGLVQSRQTPEERHF*GFLAVL
Trigger: CAAAACAGCAAGAAAACCCAAGAAATGACGCTCCTC...GGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAAGCTCCTGGGACACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS TCA 90 bp CCAGGTCACCTCGATGGAGGGGAAGATTATCCAACTCTTGGGATGTaGATTCACAAATGCACACAAACAGCCTCTCTCCCTCTTTTAGAC +
Preference number: 5 (lower is better)
Translates to: PGHLDGGEDYPTLGM*IHKCTQTASLPLLD
Trigger: GTCTAAAAGAGGGAGAGAGGCTGTTTGTGTGCATTTGTGAATTCACATCCCAAGAGTTGGATAATCTTCCCCTCCATCGAGGTGACCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS TCA 90 bp TCTCCTACAGGGGTATCTACTTCACCATTAACAATGCAGTCATCTTaGTTTCCAGAACTTACTGACTCATCCACAGTCCTCAGGGGCCCC +
Preference number: 5 (lower is better)
Translates to: SPTGVSTSPLTMQSS*FPELTDSSTVLRGP
Trigger: GGGGCCCCTGAGGACTGTGGATGAGTCAGTAAGTTCTGGAAATCAAGATGACTGCATTGTTAATGGTGAAGTAGATACCCCTGTAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS TCA 90 bp AACAAGCCCTTGGGCTTGCGGACCAGGCTTCATCTCCAATCTCTCTaGGATGGAGTAAACACTGGACGTGTGGTGCTTTTTAGTATAACT +
Preference number: 5 (lower is better)
Translates to: NKPLGLRTRLHLQSL*DGVNTGRVVLFSIT
Trigger: AGTTATACTAAAAAGCACCACACGTCCAGTGTTTACTCCATCTCAGAGAGATTGGAGATGAAGCCTGGTCCGCAAGCCCAAGGGCTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS GCA 90 bp GTCCTGCTTAAAATGTCTCCCAACCATTCCAGACACTCTTCTCGTTaGTCTAGTCGGAGCGCAGTGAGATGTGGAGTTATTTCAACCTCA +
Preference number: 5 (lower is better)
Translates to: VLLKMSPNHSRHSSR*SSRSAVRCGVISTS
Trigger: TGAGGTTGAAATAACTCCACATCTCACTGCGCTCCGACTAGAGCAACGAGAAGAGTGTCTGGAATGGTTGGGAGACATTTTAAGCAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS GCA 90 bp ACCATCATGACCTCCGTGGTACACACAGCCCTTTCCACTTTCATGTaGTTCCCCACAGTCCATATAGCTTGGTTCACTCTGTTCAAAATC +
Preference number: 5 (lower is better)
Translates to: TIMTSVVHTALSTFM*FPTVHIAWFTLFKI
Trigger: GATTTTGAACAGAGTGAACCAAGCTATATGGACTGTGGGGAAGCACATGAAAGTGGAAAGGGCTGTGTGTACCACGGAGGTCATGATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS-3UTR CAA 90 bp TCCCAGGATTTTAAGGCTAAATGTGCACTTGGAGGAACAGGGGCTGTAAGGCTAAGTTCTTCTATGACCTaGGCTCTCTTCTCCAGCATC +
Preference number: 5 (lower is better)
Translates to: SQDFKAKCALGGTGAVRLSSSMT*ALFSSI
Trigger: GATGCTGGAGAAGAGAGCCAAGGTCATAGAAGAACT...TAGCCTTACAGCCCCTGTTCCTCCAAGTGCACATTTAGCCTTAAAATCCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp CTCATAGTCACTAAGTCATTTGCAAAGCCCCAGGGTCCATTTCAAATTCTAGAGTCACCCTTACGGTACTaGAGGACCAGGTCCTTTCGC +
Preference number: 5 (lower is better)
Translates to: LIVTKSFAKPQGPFQILESPLRY*RTRSFR
Trigger: GCGAAAGGACCTGGTCCTCAAGTACCGTAAGGGTGA...CTCTAGAATTTGAAATGGACCCTGGGGCTTTGCAAATGACTTAGTGACTATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp AGCCATGAATTCTTTTCATCTGAGTTGGCATCCGGTCAGCTGAGCATGGAACATGGTAAAAACCTGGAGTaGCTGCAGAACTCTGCTGTG +
Preference number: 5 (lower is better)
Translates to: SHEFFSSELASGQLSMEHGKNLE*LQNSAV
Trigger: CACAGCAGAGTTCTGCAGCAACTCCAGGTTTTTACC...ATGTTCCATGCTCAGCTGACCGGATGCCAACTCAGATGAAAAGAATTCATGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp CATTCCAAGATAGGCTTCATAGCTGGGGAAGATCTTAAGATTCTTGGTCTAAGGACTGTAGCATGTAACTaGGCAGGCCCAGGAGTGGCT +
Preference number: 5 (lower is better)
Translates to: HSKIGFIAGEDLKILGLRTVACN*AGPGVA
Trigger: AGCCACTCCTGGGCCTGCCAAGTTACATGCTACAGT...CCTTAGACCAAGAATCTTAAGATCTTCCCCAGCTATGAAGCCTATCTTGGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp ACCAGACATCACAGACTGTGTAAAGACCATCAGAAAGGTGTCATTGAGGTTGCGTTCTTTTCATCTGAGTaGGCATCCGGTCAGCTGAGC +
Preference number: 5 (lower is better)
Translates to: TRHHRLCKDHQKGVIEVAFFSSE*ASGQLS
Trigger: GCTCAGCTGACCGGATGCCAACTCAGATGAAAAGAA...CGCAACCTCAATGACACCTTTCTGATGGTCTTTACACAGTCTGTGATGTCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp AGGTGTCCCAGGAGCTTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCTTTGAAGCACTAGGTTaGGTTCAATCCCGACAAACT +
Preference number: 5 (lower is better)
Translates to: RCPRSFEALGLVQSRQTPFEALG*VQSRQT
Trigger: AGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAA...GGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAAGCTCCTGGGACACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS TCA 90 bp TATAACTTGCTAGGTTGTGGAGCTGAGGACTTGATTGTCTGGGTTTaGCTACCCTTGAAGCTGAAACAGAAGAGCCCCTGTAAAGAGGGA +
Preference number: 5 (lower is better)
Translates to: YNLLGCGAEDLIVWV*LPLKLKQKSPCKEG
Trigger: TCCCTCTTTACAGGGGCTCTTCTGTTTCAGCTTCAAGGGTAGTCAAACCCAGACAATCAAGTCCTCAGCTCCACAACCTAGCAAGTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS TCA 90 bp GATGATTCATCCTGCTTCTCCTCCAGCATGAGGTTTAGCTCTTCTTaGGCTCTACTGTACATATCCAAGTCCCGCTCCATTTCCTCAATC +
Preference number: 5 (lower is better)
Translates to: DDSSCFSSSMRFSSS*ALLYISKSRSISSI
Trigger: GATTGAGGAAATGGAGCGGGACTTGGATATGTACAGTAGAGCTCAAGAAGAGCTAAACCTCATGCTGGAGGAGAAGCAGGATGAATCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS CCA 90 bp ATTATCCTTCGTCCCAGGGCTGAGACTCTCATAATCTACATTTTCTaGACTCCTATAACCATCATGACCTCCGTGGTACACACAGCCCTT +
Preference number: 5 (lower is better)
Translates to: IILRPRAETLIIYIF*TPITIMTSVVHTAL
Trigger: AAGGGCTGTGTGTACCACGGAGGTCATGATGGTTATAGGAGTCCAGAAAATGTAGATTATGAGAGTCTCAGCCCTGGGACGAAGGATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS-3UTR CAA 90 bp CTCATAGTCACTAAGTCATTTGCAAAGCCCCAGGGTCCATTTCAAATTCTAGAGCGAAATCCAGCTCATTaGGCTCCAGGGCTTGGAATC +
Preference number: 5 (lower is better)
Translates to: LIVTKSFAKPQGPFQILERNPAH*APGLGI
Trigger: GATTCCAAGCCCTGGAGCCAAATGAGCTGGATTTCG...CTCTAGAATTTGAAATGGACCCTGGGGCTTTGCAAATGACTTAGTGACTATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR CAA 90 bp AGTGAGCATCAAGGTTTACAACCCAATCGAGGAGAACAAGATCTGTGGTGTGCTAGTTCTTCTATGACCTaGGCTCTCTTCTCCAGCATC +
Preference number: 5 (lower is better)
Translates to: SEHQGLQPNRGEQDLWCASSSMT*ALFSSI
Trigger: GATGCTGGAGAAGAGAGCCAAGGTCATAGAAGAACT...AGCACACCACAGATCTTGTTCTCCTCGATTGGGTTGTAAACCTTGATGCTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp ACCAGACATCACAGACTGTGTAAAGACCATCAGAAAGGTGTCATTGAGGTTGCGCCTCAAAATCAATGTTaGGTACCTGTGCCTGCTGCA +
Preference number: 5 (lower is better)
Translates to: TRHHRLCKDHQKGVIEVAPQNQC*VPVPAA
Trigger: TGCAGCAGGCACAGGTACCAAACATTGATTTTGAGG...CGCAACCTCAATGACACCTTTCTGATGGTCTTTACACAGTCTGTGATGTCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp AGTGAGCATCAAGGTTTACAACCCAATCGAGGAGAACAAGATCTGTGGTGTGCTCTGTACACGAAGCCTTaGGTGACTCCATTGTCAATC +
Preference number: 5 (lower is better)
Translates to: SEHQGLQPNRGEQDLWCALYTKP*VTPLSI
Trigger: GATTGACAATGGAGTCACCAAAGGCTTCGTGTACAG...AGCACACCACAGATCTTGTTCTCCTCGATTGGGTTGTAAACCTTGATGCTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp CTTCCTGCATACATAGGACACTGGGCTTCTGACTGCAAGTTTCTCCTTTCCAAACTGTACACGAAGCCTTaGGTGACTCCATTGTCAATC +
Preference number: 5 (lower is better)
Translates to: LPAYIGHWASDCKFLLSKLYTKP*VTPLSI
Trigger: GATTGACAATGGAGTCACCAAAGGCTTCGTGTACAG...TTTGGAAAGGAGAAACTTGCAGTCAGAAGCCCAGTGTCCTATGTATGCAGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp AAAGCCCCAGGGTCCATTTCAAATTCTAGAGATTCTAGTGAGCATCAAGGTTTACGGCGTGGCAGTGGGTaGCTTTACATCTCTAGCTAC +
Preference number: 5 (lower is better)
Translates to: KAPGSISNSRDSSEHQGLRRGSG*LYISSY
Trigger: GTAGCTAGAGATGTAAAGCAACCCACTGCCACGCCG...TAAACCTTGATGCTCACTAGAATCTCTAGAATTTGAAATGGACCCTGGGGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp TTTGAAGCACTAGGTTTGGTTCAATCCCGACAAACTCCCAGCCATGTGCAAGCAAGCCTAAGGCTGGATTaGTCCTGCTTAAAATGTCTC +
Preference number: 5 (lower is better)
Translates to: FEALGLVQSRQTPSHVQASLRLD*SCLKCL
Trigger: GAGACATTTTAAGCAGGACAAATCCAGCCTTAGGCT...TGCTTGCACATGGCTGGGAGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS-3UTR CAA 90 bp GACTCCACGGTGTCTCCCGACTCCCAGGATTTTAAGGCTAAATGTGCACTTGGACACAGTCCATATAGCTaGGTTCACTCTGTTCAAAAT +
Preference number: 5 (lower is better)
Translates to: DSTVSPDSQDFKAKCALGHSPYS*VHSVQN
Trigger: ATTTTGAACAGAGTGAACCAAGCTATATGGACTGTG...TCCAAGTGCACATTTAGCCTTAAAATCCTGGGAGTCGGGAGACACCGTGGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS-3UTR CAA 90 bp TCCCAGGATTTTAAGGCTAAATGTGCACTTGGAGGAACAGGGGCTGTAAGGCTACTCCAAATTCTCCATTaGATGGAGAGAATCTGTCCC +
Preference number: 5 (lower is better)
Translates to: SQDFKAKCALGGTGAVRLLQILH*MERICP
Trigger: GGGACAGATTCTCTCCATCAAATGGAGAATTTGGAG...TAGCCTTACAGCCCCTGTTCCTCCAAGTGCACATTTAGCCTTAAAATCCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS TCA 90 bp ATCTGGAAGGACTACTCTCTGAATTACTCGGATTTAGGGATGCACTaGGAGTTCCTTGGTCACATTCTTTTGGCGGAGGAGATGCATCTT +
Preference number: 5 (lower is better)
Translates to: IWKDYSLNYSDLGMH*EFLGHILLAEEMHL
Trigger: AAGATGCATCTCCTCCGCCAAAAGAATGTGACCAAGGAACTCTCAGTGCATCCCTAAATCCGAGTAATTCAGAGAGTAGTCCTTCCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS TCA 90 bp TCCTGTAACATCTTTAAACTCGAGGATCTTGAGTTTCTGATTGGCTaGCACGCTCAGCTCATTTGGGTTTCGTGCCTTGAAGGTGTAGAC +
Preference number: 5 (lower is better)
Translates to: SCNIFKLEDLEFLIG*HAQLIWVSCLEGVD
Trigger: GTCTACACCTTCAAGGCACGAAACCCAAATGAGCTGAGCGTGTCAGCCAATCAGAAACTCAAGATCCTCGAGTTTAAAGATGTTACAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS CCA 90 bp TATAGGATTACGATAATGACCAGTCACCTCTCCTTCCTCAAGTCTTaGTTCATGCTGTCGCCATCTCAAAGACAACTGTCCTGCCATGTT +
Preference number: 5 (lower is better)
Translates to: YRITIMTSHLSFLKS*FMLSPSQRQLSCHV
Trigger: AACATGGCAGGACAGTTGTCTTTGAGATGGCGACAGCATGAACCAAGACTTGAGGAAGGAGAGGTGACTGGTCATTATCGTAATCCTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472036.1
CDS-3UTR CAA 90 bp CTTCCTGCATACATAGGACACTGGGCTTCTGACTGCAAGTTTCTCCTTTCCAAACTTGATTGTCTGGGTTaGACTACCCTTGAAGCTGAA +
Preference number: 5 (lower is better)
Translates to: LPAYIGHWASDCKFLLSKLDCLG*TTLEAE
Trigger: TTCAGCTTCAAGGGTAGTCAAACCCAGACAATCAAG...TTTGGAAAGGAGAAACTTGCAGTCAGAAGCCCAGTGTCCTATGTATGCAGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR CAA 90 bp AGCCATGAATTCTTTTCATCTGAGTTGGCATCCGGTCAGCTGAGCATGGAACATACCGCAAGGACTGCATaGGTTAAAGGCACTTTATCT +
Preference number: 5 (lower is better)
Translates to: SHEFFSSELASGQLSMEHTARTA*VKGTLS
Trigger: AGATAAAGTGCCTTTAACCAATGCAGTCCTTGCGGT...ATGTTCCATGCTCAGCTGACCGGATGCCAACTCAGATGAAAAGAATTCATGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp AGTGAGCATCAAGGTTTACAACCCAATCGAGGAGAACAAGATCTGTGGTGTGCTACCGCAAGGACTGCATaGGTTAAAGGCACTTTATCT +
Preference number: 5 (lower is better)
Translates to: SEHQGLQPNRGEQDLWCATARTA*VKGTLS
Trigger: AGATAAAGTGCCTTTAACCAATGCAGTCCTTGCGGT...AGCACACCACAGATCTTGTTCTCCTCGATTGGGTTGTAAACCTTGATGCTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp AGCCATGAATTCTTTTCATCTGAGTTGGCATCCGGTCAGCTGAGCATGGAACATTTAACGTTGATTTCCTaGACCGCAAGGACTGCATTG +
Preference number: 5 (lower is better)
Translates to: SHEFFSSELASGQLSMEHLTLIS*TARTAL
Trigger: CAATGCAGTCCTTGCGGTCAAGGAAATCAACGTTAA...ATGTTCCATGCTCAGCTGACCGGATGCCAACTCAGATGAAAAGAATTCATGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp CTTCCTGCATACATAGGACACTGGGCTTCTGACTGCAAGTTTCTCCTTTCCAAAACTCGGTTGGATTTCTaGATGATGGAGTGGATGTTC +
Preference number: 5 (lower is better)
Translates to: LPAYIGHWASDCKFLLSKTRLDF*MMEWMF
Trigger: GAACATCCACTCCATCATCAAGAAATCCAACCGAGT...TTTGGAAAGGAGAAACTTGCAGTCAGAAGCCCAGTGTCCTATGTATGCAGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp GATTTTAAGGCTAAATGTGCACTTGGAGGAACAGGGGCTGTAAGGCTATTTCTTTCCTTTGACGAGGTCTaGACTTTGCCCATTTCGTCC +
Preference number: 5 (lower is better)
Translates to: DFKAKCALGGTGAVRLFLSFDEV*TLPISS
Trigger: GGACGAAATGGGCAAAGTCAAGACCTCGTCAAAGGA...AAGAAATAGCCTTACAGCCCCTGTTCCTCCAAGTGCACATTTAGCCTTAAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp CATTCCAAGATAGGCTTCATAGCTGGGGAAGATCTTAAGATTCTTGGTCTAAGGTCCTTTGACGAGGTCTaGACTTTGCCCATTTCGTCC +
Preference number: 5 (lower is better)
Translates to: HSKIGFIAGEDLKILGLRSFDEV*TLPISS
Trigger: GGACGAAATGGGCAAAGTCAAGACCTCGTCAAAGGA...CCTTAGACCAAGAATCTTAAGATCTTCCCCAGCTATGAAGCCTATCTTGGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp ACACTCTTCACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGATTTGAAGCACTAGGTTaGGTTCAATCCCGACAAACT +
Preference number: 5 (lower is better)
Translates to: TLFTKGLLHYCLLTTTSRFEALG*VQSRQT
Trigger: AGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAA...TCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTGAAGAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp ACCAGACATCACAGACTGTGTAAAGACCATCAGAAAGGTGTCATTGAGGTTGCGTTCACAAAAGGACTCTaGCATTACTGCCTTCTGACC +
Preference number: 5 (lower is better)
Translates to: TRHHRLCKDHQKGVIEVAFTKGL*HYCLLT
Trigger: GGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTGAA...CGCAACCTCAATGACACCTTTCTGATGGTCTTTACACAGTCTGTGATGTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp AGCCATGAATTCTTTTCATCTGAGTTGGCATCCGGTCAGCTGAGCATGGAACATTTCACAAAAGGACTCTaGCATTACTGCCTTCTGACC +
Preference number: 5 (lower is better)
Translates to: SHEFFSSELASGQLSMEHFTKGL*HYCLLT
Trigger: GGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTGAA...ATGTTCCATGCTCAGCTGACCGGATGCCAACTCAGATGAAAAGAATTCATGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp ACACTCTTCACAAAAGGACTCTTGCATTACTGCCTTCTGACCACGACCAGCAGACATGTGCCTTTGTTCTaGGTATGTCAGTGCCATTAT +
Preference number: 5 (lower is better)
Translates to: TLFTKGLLHYCLLTTTSRHVPLF*VCQCHY
Trigger: ATAATGGCACTGACATACCAAGAACAAAGGCACATG...TCTGCTGGTCGTGGTCAGAAGGCAGTAATGCAAGAGTCCTTTTGTGAAGAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS-3UTR CAA 90 bp GCTTATCCCAATTCAAGTAAGTCACAGGTGTTATGTTGTCTGCATCTATGGATGTGCCCCCATGTGCCTTaGTTCTTGGTATGTCAGTGC +
Preference number: 5 (lower is better)
Translates to: AYPNSSKSQVLCCLHLWMCPHVP*FLVCQC
Trigger: GCACTGACATACCAAGAACAAAGGCACATGGGGGCA...CATCCATAGATGCAGACAACATAACACCTGTGACTTACTTGAATTGGGATAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS GCA 90 bp AACACAGGTCCTACAGCATCGCTGATTTCCAGAGCAGCCAATAATTaGTTCGAGACCTTAATCACCATCTGCATATTTCCAAAAAGTCCC +
Preference number: 5 (lower is better)
Translates to: NTGPTASLISRAANN*FETLITICIFPKSP
Trigger: GGGACTTTTTGGAAATATGCAGATGGTGATTAAGGTCTCGAAGCAATTATTGGCTGCTCTGGAAATCAGCGATGCTGTAGGACCTGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS CCA 90 bp GCTTCTGGATCTTCTCATCCTTCTCGTAGATTTCAAGCAGCGCAATaGCCTCATCATGATTCTGGCAGTAAATCTTGTATGTTCCCTCAA +
Preference number: 5 (lower is better)
Translates to: ASGSSHPSRRFQAAQ*PHHDSGSKSCMFPQ
Trigger: TTGAGGGAACATACAAGATTTACTGCCAGAATCATGATGAGGCCATTGCGCTGCTTGAAATCTACGAGAAGGATGAGAAGATCCAGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp GATTTTAAGGCTAAATGTGCACTTGGAGGAACAGGGGCTGTAAGGCTATTTCTTCCTCAAAATCAATGTTaGGTACCTGTGCCTGCTGCA +
Preference number: 5 (lower is better)
Translates to: DFKAKCALGGTGAVRLFLPQNQC*VPVPAA
Trigger: TGCAGCAGGCACAGGTACCAAACATTGATTTTGAGG...AAGAAATAGCCTTACAGCCCCTGTTCCTCCAAGTGCACATTTAGCCTTAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp CATTCCAAGATAGGCTTCATAGCTGGGGAAGATCTTAAGATTCTTGGTCTAAGGCCTCAAAATCAATGTTaGGTACCTGTGCCTGCTGCA +
Preference number: 5 (lower is better)
Translates to: HSKIGFIAGEDLKILGLRPQNQC*VPVPAA
Trigger: TGCAGCAGGCACAGGTACCAAACATTGATTTTGAGG...CCTTAGACCAAGAATCTTAAGATCTTCCCCAGCTATGAAGCCTATCTTGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp CATTCCAAGATAGGCTTCATAGCTGGGGAAGATCTTAAGATTCTTGGTCTAAGGCTTGGTCACATTCTTTaGGCGGAGGAGATGCATCTT +
Preference number: 5 (lower is better)
Translates to: HSKIGFIAGEDLKILGLRLGHIL*AEEMHL
Trigger: AAGATGCATCTCCTCCGCCAAAAGAATGTGACCAAG...CCTTAGACCAAGAATCTTAAGATCTTCCCCAGCTATGAAGCCTATCTTGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp TGTGTAAAGACCATCAGAAAGGTGTCATTGAGGTTGCGGTATGGTGGCTTACACTTTGAAGCACTAGGTTaGGTTCAATCCCGACAAACT +
Preference number: 5 (lower is better)
Translates to: CVKTIRKVSLRLRYGGLHFEALG*VQSRQT
Trigger: AGTTTGTCGGGATTGAACCAAACCTAGTGCTTCAAA...GTGTAAGCCACCATACCGCAACCTCAATGACACCTTTCTGATGGTCTTTACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp TCCCAGGATTTTAAGGCTAAATGTGCACTTGGAGGAACAGGGGCTGTAAGGCTAATACATGTTGTCATTTaGATGAACATTCCTGTCCCC +
Preference number: 5 (lower is better)
Translates to: SQDFKAKCALGGTGAVRLIHVVI*MNIPVP
Trigger: GGGGACAGGAATGTTCATCAAAATGACAACATGTAT...TAGCCTTACAGCCCCTGTTCCTCCAAGTGCACATTTAGCCTTAAAATCCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS TCA 90 bp TCTGTATTTCCTGTAACATCTTTAAACTCGAGGATCTTGAGTTTCTaGTTGGCTGACACGCTCAGCTCATTTGGGTTTCGTGCCTTGAAG +
Preference number: 5 (lower is better)
Translates to: SVFPVTSLNSRILSF*LADTLSSFGFRALK
Trigger: CTTCAAGGCACGAAACCCAAATGAGCTGAGCGTGTCAGCCAATCAGAAACTCAAGATCCTCGAGTTTAAAGATGTTACAGGAAATACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp AAAGCCCCAGGGTCCATTTCAAATTCTAGAGATTCTAGTGAGCATCAAGGTTTAAAAAGGGACCTGAGGTaGGGAGGAAATACCATTGAC +
Preference number: 5 (lower is better)
Translates to: KAPGSISNSRDSSEHQGLKRDLR*GGNTID
Trigger: GTCAATGGTATTTCCTCCCAACCTCAGGTCCCTTTT...TAAACCTTGATGCTCACTAGAATCTCTAGAATTTGAAATGGACCCTGGGGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR CAA 90 bp AGCCATGAATTCTTTTCATCTGAGTTGGCATCCGGTCAGCTGAGCATGGAACATATTTCTTGGGTTTTCTaGCTGTTTTGCACGAACTCT +
Preference number: 5 (lower is better)
Translates to: SHEFFSSELASGQLSMEHISWVF*LFCTNS
Trigger: AGAGTTCGTGCAAAACAGCAAGAAAACCCAAGAAAT...ATGTTCCATGCTCAGCTGACCGGATGCCAACTCAGATGAAAAGAATTCATGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS-3UTR CAA 90 bp TCAGCTCAAAGCAGAACTAATACTTTTAATGGAATGGCTGGAGCTCTCATACTGAAAACTGCTGGGGAATaGTCCTGTAACATCCTCCTT +
Preference number: 5 (lower is better)
Translates to: SAQSRTNTFNGMAGALILKTAGE*SCNILL
Trigger: AAGGAGGATGTTACAGGACAATTCCCCAGCAGTTTT...CAGTATGAGAGCTCCAGCCATTCCATTAAAAGTATTAGTTCTGCTTTGAGCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS-3UTR CAA 90 bp AAAGCCCCAGGGTCCATTTCAAATTCTAGAGATTCTAGTGAGCATCAAGGTTTAACCGCAAGGACTGCATaGGTTAAAGGCACTTTATCT +
Preference number: 5 (lower is better)
Translates to: KAPGSISNSRDSSEHQGLTARTA*VKGTLS
Trigger: AGATAAAGTGCCTTTAACCAATGCAGTCCTTGCGGT...TAAACCTTGATGCTCACTAGAATCTCTAGAATTTGAAATGGACCCTGGGGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp GCTTATCCCAATTCAAGTAAGTCACAGGTGTTATGTTGTCTGCATCTATGGATGACTCGGTTGGATTTCTaGATGATGGAGTGGATGTTC +
Preference number: 5 (lower is better)
Translates to: AYPNSSKSQVLCCLHLWMTRLDF*MMEWMF
Trigger: GAACATCCACTCCATCATCAAGAAATCCAACCGAGT...CATCCATAGATGCAGACAACATAACACCTGTGACTTACTTGAATTGGGATAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS-3UTR CAA 90 bp GATTTTAAGGCTAAATGTGCACTTGGAGGAACAGGGGCTGTAAGGCTATTTCTTTCATTAATGTTAACGTaGATTTCCTTGACCGCAAGG +
Preference number: 5 (lower is better)
Translates to: DFKAKCALGGTGAVRLFLSLMLT*ISLTAR
Trigger: CCTTGCGGTCAAGGAAATCAACGTTAACATTAATGA...AAGAAATAGCCTTACAGCCCCTGTTCCTCCAAGTGCACATTTAGCCTTAAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS TCA 90 bp ATGGTATTTGATAAATTCCTTATCTTCATTGACACCATTCGAATCTaGAAAGCTCACAGGCTGACCATCAGGATAACTCCCAGGAACATG +
Preference number: 5 (lower is better)
Translates to: MVFDKFLIFIDTIRI*KAHRLTIRITPRNM
Trigger: CATGTTCCTGGGAGTTATCCTGATGGTCAGCCTGTGAGCTTTTCAGATTCGAATGGTGTCAATGAAGATAAGGAATTTATCAAATACCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS-3UTR CAA 90 bp GCTTATCCCAATTCAAGTAAGTCACAGGTGTTATGTTGTCTGCATCTATGGATGTCATTAATGTTAACGTaGATTTCCTTGACCGCAAGG +
Preference number: 5 (lower is better)
Translates to: AYPNSSKSQVLCCLHLWMSLMLT*ISLTAR
Trigger: CCTTGCGGTCAAGGAAATCAACGTTAACATTAATGA...CATCCATAGATGCAGACAACATAACACCTGTGACTTACTTGAATTGGGATAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS GCA 90 bp ATTTCCAGAGCAGCCAATAATTGCTTCGAGACCTTAATCACCATCTaGATATTTCCAAAAAGTCCCTCAAAATCAATGTTTGGTACCTGT +
Preference number: 5 (lower is better)
Translates to: ISRAANNCFETLITI*IFPKSPSKSMFGTC
Trigger: ACAGGTACCAAACATTGATTTTGAGGGACTTTTTGGAAATATGCAGATGGTGATTAAGGTCTCGAAGCAATTATTGGCTGCTCTGGAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS TCA 90 bp TTTGTTCTTGGTATGTCAGTGCCATTATACTCCAAATTCTCCATTTaGTGGAGAGAATCTGTCCCTCTGGAATTACGAGATTTATATGCA +
Preference number: 5 (lower is better)
Translates to: FVLGMSVPLYSKFSI*WRESVPLELRDLYA
Trigger: TGCATATAAATCTCGTAATTCCAGAGGGACAGATTCTCTCCATCAAATGGAGAATTTGGAGTATAATGGCACTGACATACCAAGAACAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS CCA 90 bp CATTATACTCCAAATTCTCCATTTGATGGAGAGAATCTGTCCCTCTaGAATTACGAGATTTATATGCACAGTTTGCAAATAAAGCATCAT +
Preference number: 5 (lower is better)
Translates to: HYTPNSPFDGENLSL*NYEIYMHSLQIKHH
Trigger: ATGATGCTTTATTTGCAAACTGTGCATATAAATCTCGTAATTCCAGAGGGACAGATTCTCTCCATCAAATGGAGAATTTGGAGTATAATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS CAA 72 bp TTCCGCCGCCCGGCGGTCCCTCGGCGCGGCAGGCAGTaGCAGCCGCCAGTCCCCAGCCCGCTGTCACCTCCG +
Preference number: 6 (lower is better)
Translates to: FRRPAVPRRGRQ*QPPVPSPLSPP
Trigger: CGGAGGTGACAGCGGGCTGGGGACTGGCGGCTGCAACTGCCTGCCGCGCCGAGGGACCGCCGGGCGGCGGAA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS GCA 72 bp GGGAAGAAGCCCCGTGCGCCCCAGCAGCTTCGGCCCTaGAGCCAGCCTGCAGTGGGAATGCCATCGAGAATC +
Preference number: 6 (lower is better)
Translates to: GKKPRAPQQLRP*SQPAVGMPSRI
Trigger: GATTCTCGATGGCATTCCCACTGCAGGCTGGCTGCAGGGCCGAAGCTGCTGGGGCGCACGGGGCTTCTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS CCA 72 bp GGAACCTGGGGGAGGAGCTGCCGTGCTCAGACTCTGTaGAGGAGTGGCTACCCACGGAGGCATCGGAGTGGC +
Preference number: 6 (lower is better)
Translates to: GTWGRSCRAQTL*RSGYPRRHRSG
Trigger: GCCACTCCGATGCCTCCGTGGGTAGCCACTCCTCCACAGAGTCTGAGCACGGCAGCTCCTCCCCCAGGTTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS CCA 72 bp CTGCTGGGGTTGAAGGTCAGGGTGCTGCCGCTGTTCTaGCGTGGGAACCTGGGGGAGGAGCTGCCGTGCTCA +
Preference number: 6 (lower is better)
Translates to: LLGLKVRVLPLF*RGNLGEELPCS
Trigger: TGAGCACGGCAGCTCCTCCCCCAGGTTCCCACGCCAGAACAGCGGCAGCACCCTGACCTTCAACCCCAGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS GCA 72 bp CTGTTCTGGCGTGGGAACCTGGGGGAGGAGCTGCCGTaGTCAGACTCTGTGGAGGAGTGGCTACCCACGGAG +
Preference number: 6 (lower is better)
Translates to: LFWRGNLGEELP*SDSVEEWLPTE
Trigger: CTCCGTGGGTAGCCACTCCTCCACAGAGTCTGAGCACGGCAGCTCCTCCCCCAGGTTCCCACGCCAGAACAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS TCA 72 bp AGGGCCCGGGCTTGTCCCATGGAATATTCCGGAATCTaGAACAGGGCGCTCTGGGAGTGCCACTGCCGGCTC +
Preference number: 6 (lower is better)
Translates to: RARACPMEYSGI*NRALWECHCRL
Trigger: GAGCCGGCAGTGGCACTCCCAGAGCGCCCTGTTTCAGATTCCGGAATATTCCATGGGACAAGCCCGGGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS CAA 72 bp GACCCCGAGGTAAAGGATACAGCCATGCTGCTGGGGTaGAAGGTCAGGGTGCTGCCGCTGTTCTGGCGTGGG +
Preference number: 6 (lower is better)
Translates to: DPEVKDTAMLLG*KVRVLPLFWRG
Trigger: CCCACGCCAGAACAGCGGCAGCACCCTGACCTTCAACCCCAGCAGCATGGCTGTATCCTTTACCTCGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS CAA 90 bp TTCTGGCAAGACCCCGAGGTAAAGGATACAGCCATGCTGCTGGGGTaGAAGGTCAGGGTGCTGCCGCTGTTCTGGCGTGGGAACCTGGGG +
Preference number: 6 (lower is better)
Translates to: FWQDPEVKDTAMLLG*KVRVLPLFWRGNLG
Trigger: CCCCAGGTTCCCACGCCAGAACAGCGGCAGCACCCTGACCTTCAACCCCAGCAGCATGGCTGTATCCTTTACCTCGGGGTCTTGCCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS GCA 72 bp TTCCCACTCCACGCCTGGGCTTCTCGGGGGCCCTCCTaGGGTGTCCTCGTCCTGATAAGAGTTTCTGTCTGT +
Preference number: 6 (lower is better)
Translates to: FPLHAWASRGPS*GVLVLIRVSVC
Trigger: ACAGACAGAAACTCTTATCAGGACGAGGACACCGCAGGAGGGCCCCCGAGAAGCCCAGGCGTGGAGTGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS GCA 72 bp GCACGAACTCTGAGCGCCTCAGGGTGCTGGGTGCTGTaGGGCGGAGGCAACTATTCCTTCTCCAAGTCTCTG +
Preference number: 6 (lower is better)
Translates to: ARTLSASGCWVL*GGGNYSFSKSL
Trigger: CAGAGACTTGGAGAAGGAATAGTTGCCTCCGCCGCACAGCACCCAGCACCCTGAGGCGCTCAGAGTTCGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS CCA 72 bp CCTCGGCGGACTGAAAGCAAAGGCAGCAAGGCTGGGTaGCAGGCAACGTGGGCTCAGGTGTACTCGGTTTTG +
Preference number: 6 (lower is better)
Translates to: PRRTESKGSKAG*QATWAQVYSVL
Trigger: CAAAACCGAGTACACCTGAGCCCACGTTGCCTGCCACCCAGCCTTGCTGCCTTTGCTTTCAGTCCGCCGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS TCA 72 bp ACATCCCCTTCCCTGAAGTCCAGCTCTTCATCCAGCTaGGCAGAAAGCCCCATTAGGGCCCGGGCTTGTCCC +
Preference number: 6 (lower is better)
Translates to: TSPSLKSSSSSS*AESPIRARACP
Trigger: GGGACAAGCCCGGGCCCTAATGGGGCTTTCTGCTCAGCTGGATGAAGAGCTGGACTTCAGGGAAGGGGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS GCA 72 bp TGGAGGAGTGGCTACCCACGGAGGCATCGGAGTGGCTaGGGCGAGGATTGTAGGGCTTTAGGAAAGAGCTGT +
Preference number: 6 (lower is better)
Translates to: WRSGYPRRHRSG*GEDCRALGKSC
Trigger: ACAGCTCTTTCCTAAAGCCCTACAATCCTCGCCGCAGCCACTCCGATGCCTCCGTGGGTAGCCACTCCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS CAA 72 bp CCCGACCTCGAAATCCAGCTCATTTGGCTCCAGGGCTaGGAATCTGTACAGGGCGACCCCATAGGTCCCTGG +
Preference number: 6 (lower is better)
Translates to: PDLEIQLIWLQG*ESVQGDPIGPW
Trigger: CCAGGGACCTATGGGGTCGCCCTGTACAGATTCCAAGCCCTGGAGCCAAATGAGCTGGATTTCGAGGTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS GCA 72 bp GTACTGGTGGAACTTGGGCAGCTCATCCAGCAGCTGTaGATTCAGGGCCTCATAGTTGTTCCGGGCCGACTG +
Preference number: 6 (lower is better)
Translates to: VLVELGQLIQQL*IQGLIVVPGRL
Trigger: CAGTCGGCCCGGAACAACTATGAGGCCCTGAATGCACAGCTGCTGGATGAGCTGCCCAAGTTCCACCAGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS GCA 72 bp TCTTGCTGTTTTGCACGAACTCTGAGCGCCTCAGGGTaGTGGGTGCTGTGCGGCGGAGGCAACTATTCCTTC +
Preference number: 6 (lower is better)
Translates to: SCCFARTLSASG*WVLCGGGNYSF
Trigger: GAAGGAATAGTTGCCTCCGCCGCACAGCACCCAGCACCCTGAGGCGCTCAGAGTTCGTGCAAAACAGCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS CCA 72 bp GAGCAGAAAGCCCCATTAGGGCCCGGGCTTGTCCCATaGAATATTCCGGAATCTGAAACAGGGCGCTCTGGG +
Preference number: 6 (lower is better)
Translates to: EQKAPLGPGLVP*NIPESETGRSG
Trigger: CCCAGAGCGCCCTGTTTCAGATTCCGGAATATTCCATGGGACAAGCCCGGGCCCTAATGGGGCTTTCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS CCA 72 bp AAAGAAGTTTCCGGGATCCTGGCAAGGCTGCCTTCCTaGGGCAGAGCCATGGTTTCCTCCACCCGTGTGTCA +
Preference number: 6 (lower is better)
Translates to: KEVSGILARLPS*GRAMVSSTRVS
Trigger: TGACACACGGGTGGAGGAAACCATGGCTCTGCCCCAGGAAGGCAGCCTTGCCAGGATCCCGGAAACTTCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS CCA 72 bp TGGACACAGTTGGTGAAGAGGCCCTGGGCGTACTGGTaGAACTTGGGCAGCTCATCCAGCAGCTGTGCATTC +
Preference number: 6 (lower is better)
Translates to: WTQLVKRPWAYW*NLGSSSSSCAF
Trigger: GAATGCACAGCTGCTGGATGAGCTGCCCAAGTTCCACCAGTACGCCCAGGGCCTCTTCACCAACTGTGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS CAA 72 bp GGGCCCTGCCAAGCTCTTCTCAAACTCGATCAGCTGTaGTGTCAGCTTCGAGTCCAGGTCAGTGCTGCCGTC +
Preference number: 6 (lower is better)
Translates to: GPCQALLKLDQL*CQLRVQVSAAV
Trigger: GACGGCAGCACTGACCTGGACTCGAAGCTGACACAACAGCTGATCGAGTTTGAGAAGAGCTTGGCAGGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS TCA 72 bp CAGCTTCGAGTCCAGGTCAGTGCTGCCGTCTCCCTGTaGATGTGTTGCTGCTTCCATAACAAGCCCTTGGGC +
Preference number: 6 (lower is better)
Translates to: QLRVQVSAAVSL*MCCCFHNKPLG
Trigger: GCCCAAGGGCTTGTTATGGAAGCAGCAACACATTCACAGGGAGACGGCAGCACTGACCTGGACTCGAAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS CCA 72 bp GGATCCTGGCAAGGCTGCCTTCCTGGGGCAGAGCCATaGTTTCCTCCACCCGTGTGTCAGGACATAATTTCA +
Preference number: 6 (lower is better)
Translates to: GSWQGCLPGAEP*FPPPVCQDIIS
Trigger: TGAAATTATGTCCTGACACACGGGTGGAGGAAACCATGGCTCTGCCCCAGGAAGGCAGCCTTGCCAGGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS CCA 72 bp GTTTTAGGTTCTGGTCAACCAGCAAATGGGGAGAAGTaGATACCGGAGTACAGGGACGAGGTGGCGGTGGCC +
Preference number: 6 (lower is better)
Translates to: VLGSGQPANGEK*IPEYRDEVAVA
Trigger: GGCCACCGCCACCTCGTCCCTGTACTCCGGTATCCACTTCTCCCCATTTGCTGGTTGACCAGAACCTAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS CCA 72 bp TCCGTTCTGCCTGGAAGAGTTTTTCAGGGGGATACCTaGCCAGGAGGGAGGCCCGGAGTTCTTCTGACTGTA +
Preference number: 6 (lower is better)
Translates to: SVLPGRVFQGDT*PGGRPGVLLTV
Trigger: TACAGTCAGAAGAACTCCGGGCCTCCCTCCTGGCCAGGTATCCCCCTGAAAAACTCTTCCAGGCAGAACGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS CCA 72 bp CCCATTTCGTCCTGGTACGGAGTAGCCAACTATTTCTaGATGCCTGAAGTTCCGGTAGCTCCTCGGCGTGGC +
Preference number: 6 (lower is better)
Translates to: PISSWYGVANYF*MPEVPVAPRRG
Trigger: GCCACGCCGAGGAGCTACCGGAACTTCAGGCATCCAGAAATAGTTGGCTACTCCGTACCAGGACGAAATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS CAA 72 bp CCTGAAGTTCCGGTAGCTCCTCGGCGTGGCAGTGGGTaGCTTTACATCTCTAGCTACATCTGCAGAGTCCCC +
Preference number: 6 (lower is better)
Translates to: PEVPVAPRRGSG*LYISSYICRVP
Trigger: GGGGACTCTGCAGATGTAGCTAGAGATGTAAAGCAACCCACTGCCACGCCGAGGAGCTACCGGAACTTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS CAA 90 bp TCCTTTTCTAAGGTCTCACAGGTAGGACGGTGTCGAGATAGGAGCTaGGGGGATACCGCATTCGTTCTCTGCTGTGCTGAGGGAGGCAGG +
Preference number: 6 (lower is better)
Translates to: SFSKVSQVGRCRDRS*GDTAFVLCCAEGGR
Trigger: CCTGCCTCCCTCAGCACAGCAGAGAACGAATGCGGTATCCCCCAAGCTCCTATCTCGACACCGTCCTACCTGTGAGACCTTAGAAAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS GCA 72 bp CGATCAGCTGTTGTGTCAGCTTCGAGTCCAGGTCAGTaGTGCCGTCTCCCTGTGAATGTGTTGCTGCTTCCA +
Preference number: 6 (lower is better)
Translates to: RSAVVSASSPGQ*CRLPVNVLLLP
Trigger: TGGAAGCAGCAACACATTCACAGGGAGACGGCAGCACTGACCTGGACTCGAAGCTGACACAACAGCTGATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS GCA 72 bp GGTGGCAGGCAACGTGGGCTCAGGTGTACTCGGTTTTaGGGATATAATTGGAGGGAACGTAGCCCTTCTTCC +
Preference number: 6 (lower is better)
Translates to: GGRQRGLRCTRF*GYNWRERSPSS
Trigger: GGAAGAAGGGCTACGTTCCCTCCAATTATATCCGCAAAACCGAGTACACCTGAGCCCACGTTGCCTGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS CCA 72 bp TCGGATTTTATCCCCGACCTCGAAATCCAGCTCATTTaGCTCCAGGGCTTGGAATCTGTACAGGGCGACCCC +
Preference number: 6 (lower is better)
Translates to: SDFIPDLEIQLI*LQGLESVQGDP
Trigger: GGGGTCGCCCTGTACAGATTCCAAGCCCTGGAGCCAAATGAGCTGGATTTCGAGGTCGGGGATAAAATCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS CCA 72 bp GGTCGCACCACCAAGGGTGGTGCAGGTTTTAGGTTCTaGTCAACCAGCAAATGGGGAGAAGTGGATACCGGA +
Preference number: 6 (lower is better)
Translates to: GRTTKGGAGFRF*STSKWGEVDTG
Trigger: TCCGGTATCCACTTCTCCCCATTTGCTGGTTGACCAGAACCTAAAACCTGCACCACCCTTGGTGGTGCGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS CAA 72 bp AAGGTCTCACAGGTAGGACGGTGTCGAGATAGGAGCTaGGGGGATACCGCATTCGTTCTCTGCTGTGCTGAG +
Preference number: 6 (lower is better)
Translates to: KVSQVGRCRDRS*GDTAFVLCCAE
Trigger: CTCAGCACAGCAGAGAACGAATGCGGTATCCCCCAAGCTCCTATCTCGACACCGTCCTACCTGTGAGACCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS GCA 72 bp GGTGGCCTTAGGGCCTTTCTCCTTTCCGGCAGCTCCTaGTCGGTGATTAACTTTGAGGAACCTCGGACAATA +
Preference number: 6 (lower is better)
Translates to: GGLRAFLLSGSS*SVINFEEPRTI
Trigger: TATTGTCCGAGGTTCCTCAAAGTTAATCACCGAGCAGGAGCTGCCGGAAAGGAGAAAGGCCCTAAGGCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS GCA 72 bp GAGAGTTCCTTGGTCACATTCTTTTGGCGGAGGAGATaGATCTTGAGGCTGCTTCTGGCAAGACCCCGAGGT +
Preference number: 6 (lower is better)
Translates to: ESSLVTFFWRRR*ILRLLLARPRG
Trigger: ACCTCGGGGTCTTGCCAGAAGCAGCCTCAAGATGCATCTCCTCCGCCAAAAGAATGTGACCAAGGAACTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS GCA 72 bp GAGAGGAGCGTCATTTCTTGGGTTTTCTTGCTGTTTTaGACGAACTCTGAGCGCCTCAGGGTGCTGGGTGCT +
Preference number: 6 (lower is better)
Translates to: ERSVISWVFLLF*TNSERLRVLGA
Trigger: AGCACCCAGCACCCTGAGGCGCTCAGAGTTCGTGCAAAACAGCAAGAAAACCCAAGAAATGACGCTCCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS CCA 72 bp GGTGGTGCAGGTTTTAGGTTCTGGTCAACCAGCAAATaGGGAGAAGTGGATACCGGAGTACAGGGACGAGGT +
Preference number: 6 (lower is better)
Translates to: GGAGFRFWSTSK*GEVDTGVQGRG
Trigger: ACCTCGTCCCTGTACTCCGGTATCCACTTCTCCCCATTTGCTGGTTGACCAGAACCTAAAACCTGCACCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS CCA 72 bp ACCTGGAGTTGCTGCAGAACTCTGCTGTGCTCTTCGTaGAAGATGGCAATAAGGTTTCCCTCTCTGCCAGCC +
Preference number: 6 (lower is better)
Translates to: TWSCCRTLLCSS*KMAIRFPSLPA
Trigger: GGCTGGCAGAGAGGGAAACCTTATTGCCATCTTCCACGAAGAGCACAGCAGAGTTCTGCAGCAACTCCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS CCA 72 bp GACACAGACCCAGAAGGGGCCACCAGTGATGAAGACTaGGAGGAGAGGAGCGTCATTTCTTGGGTTTTCTTG +
Preference number: 6 (lower is better)
Translates to: DTDPEGATSDED*EERSVISWVFL
Trigger: CAAGAAAACCCAAGAAATGACGCTCCTCTCCTCCCAGTCTTCATCACTGGTGGCCCCTTCTGGGTCTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS CAA 72 bp TTCGGATTTTATCCCCGACCTCGAAATCCAGCTCATTaGGCTCCAGGGCTTGGAATCTGTACAGGGCGACCC +
Preference number: 6 (lower is better)
Translates to: FGFYPRPRNPAH*APGLGICTGRP
Trigger: GGGTCGCCCTGTACAGATTCCAAGCCCTGGAGCCAAATGAGCTGGATTTCGAGGTCGGGGATAAAATCCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS CAA 72 bp AGCCTGGGCTGTTCTTGCACATCCTTTGACGAGGTCTaGACTTTGCCCATTTCGTCCTGGTACGGAGTAGCC +
Preference number: 6 (lower is better)
Translates to: SLGCSCTSFDEV*TLPISSWYGVA
Trigger: GGCTACTCCGTACCAGGACGAAATGGGCAAAGTCAAGACCTCGTCAAAGGATGTGCAAGAACAGCCCAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS CAA 90 bp CCTGGGCTGGGCTGTGGACAGGTGCAGTCTAGCCTAAGGCTGGATTaGTCCTGCTTAAAATGTCTCCCAACCATTCCAGACACTCTTCTC +
Preference number: 6 (lower is better)
Translates to: PGLGCGQVQSSLRLD*SCLKCLPTIPDTLL
Trigger: GAGAAGAGTGTCTGGAATGGTTGGGAGACATTTTAAGCAGGACAAATCCAGCCTTAGGCTAGACTGCACCTGTCCACAGCCCAGCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS TCA 72 bp GTCGCCATCTCAAAGACAACTGTCCTGCCATGTTACTaGTCCTCAAAACCTGGTTTCCCATCCGACCCTGGC +
Preference number: 6 (lower is better)
Translates to: VAISKTTVLPCY*SSKPGFPSDPG
Trigger: GCCAGGGTCGGATGGGAAACCAGGTTTTGAGGATCAGTAACATGGCAGGACAGTTGTCTTTGAGATGGCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472036.1
CDS GCA 72 bp TGGTACACTGAGTCTGCAGACCATCCAGAAGGATCCTaGTGCCCCCATGTGCCTTTGTTCTTGGTATGTCAG +
Preference number: 6 (lower is better)
Translates to: WYTESADHPEGS*CPHVPLFLVCQ
Trigger: CTGACATACCAAGAACAAAGGCACATGGGGGCAGCAGGATCCTTCTGGATGGTCTGCAGACTCAGTGTACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS CCA 72 bp TGTTCTCCAAACAATCCAAAGAAGTTTCCGGGATCCTaGCAAGGCTGCCTTCCTGGGGCAGAGCCATGGTTT +
Preference number: 6 (lower is better)
Translates to: CSPNNPKKFPGS*QGCLPGAEPWF
Trigger: AAACCATGGCTCTGCCCCAGGAAGGCAGCCTTGCCAGGATCCCGGAAACTTCTTTGGATTGTTTGGAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS CCA 72 bp CCCTGTGAATGTGTTGCTGCTTCCATAACAAGCCCTTaGGCTTGCGGACCAGGCTTCATCTCCAATCTCTCT +
Preference number: 6 (lower is better)
Translates to: PCECVAASITSP*ACGPGFISNLS
Trigger: AGAGAGATTGGAGATGAAGCCTGGTCCGCAAGCCCAAGGGCTTGTTATGGAAGCAGCAACACATTCACAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS CCA 72 bp GTAGCTGGAAGAGACTCCGGGAAGAAGGTAAAAACCTaGAGTTGCTGCAGAACTCTGCTGTGCTCTTCGTGG +
Preference number: 6 (lower is better)
Translates to: VAGRDSGKKVKT*SCCRTLLCSSW
Trigger: CCACGAAGAGCACAGCAGAGTTCTGCAGCAACTCCAGGTTTTTACCTTCTTCCCGGAGTCTCTTCCAGCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS CCA 72 bp TTGGCTGGGAGGTGGAGTCTGGGTCTGAAGGGCATCTaGAAGGACTACTCTCTGAATTACTCGGATTTAGGG +
Preference number: 6 (lower is better)
Translates to: LAGRWSLGLKGI*KDYSLNYSDLG
Trigger: CCCTAAATCCGAGTAATTCAGAGAGTAGTCCTTCCAGATGCCCTTCAGACCCAGACTCCACCTCCCAGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS CCA 72 bp GAGGAATCCCCAAATGATGTCCTCCTTGTTCTCCCCTaGTACACTGAGTCTGCAGACCATCCAGAAGGATCC +
Preference number: 6 (lower is better)
Translates to: EESPNDVLLVLP*YTESADHPEGS
Trigger: GGATCCTTCTGGATGGTCTGCAGACTCAGTGTACCAGGGGAGAACAAGGAGGACATCATTTGGGGATTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS CAA 72 bp TCCTTGGTCACATTCTTTTGGCGGAGGAGATGCATCTaGAGGCTGCTTCTGGCAAGACCCCGAGGTAAAGGA +
Preference number: 6 (lower is better)
Translates to: SLVTFFWRRRCI*RLLLARPRGKG
Trigger: TCCTTTACCTCGGGGTCTTGCCAGAAGCAGCCTCAAGATGCATCTCCTCCGCCAAAAGAATGTGACCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS CAA 90 bp CGGAGCCTGGGCTGTTCTTGCACATCCTTTGACGAGGTCTTGACTTaGCCCATTTCGTCCTGGTACGGAGTAGCCAACTATTTCTGGATG +
Preference number: 6 (lower is better)
Translates to: RSLGCSCTSFDEVLT*PISSWYGVANYFWM
Trigger: CATCCAGAAATAGTTGGCTACTCCGTACCAGGACGAAATGGGCAAAGTCAAGACCTCGTCAAAGGATGTGCAAGAACAGCCCAGGCTCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS CAA 90 bp GTCTTCCGGAGCCTGGGCTGTTCTTGCACATCCTTTGACGAGGTCTaGACTTTGCCCATTTCGTCCTGGTACGGAGTAGCCAACTATTTC +
Preference number: 6 (lower is better)
Translates to: VFRSLGCSCTSFDEV*TLPISSWYGVANYF
Trigger: GAAATAGTTGGCTACTCCGTACCAGGACGAAATGGGCAAAGTCAAGACCTCGTCAAAGGATGTGCAAGAACAGCCCAGGCTCCGGAAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS CAA 90 bp ACTGAGAGTTCCTTGGTCACATTCTTTTGGCGGAGGAGATGCATCTaGAGGCTGCTTCTGGCAAGACCCCGAGGTAAAGGATACAGCCAT +
Preference number: 6 (lower is better)
Translates to: TESSLVTFFWRRRCI*RLLLARPRGKGYSH
Trigger: ATGGCTGTATCCTTTACCTCGGGGTCTTGCCAGAAGCAGCCTCAAGATGCATCTCCTCCGCCAAAAGAATGTGACCAAGGAACTCTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS TCA 72 bp ACCAGCTTTCGAGGTCACATCTGGGCTTCTCGTAGGTaGATTATCCTTCGTCCCAGGGCTGAGACTCTCATA +
Preference number: 6 (lower is better)
Translates to: TSFRGHIWASRR*IILRPRAETLI
Trigger: TATGAGAGTCTCAGCCCTGGGACGAAGGATAATTCACCTACGAGAAGCCCAGATGTGACCTCGAAAGCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS GCA 72 bp TGTCAGGACATAATTTCACAAACCGGTAAGGAAAGATaGCTGTCCTGCCCTTCAGGGATCCTTCCAGCCAGC +
Preference number: 6 (lower is better)
Translates to: CQDIISQTGKER*LSCPSGILPAS
Trigger: GCTGGCTGGAAGGATCCCTGAAGGGCAGGACAGGCATCTTTCCTTACCGGTTTGTGAAATTATGTCCTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS GCA 72 bp GAATGTGTTGCTGCTTCCATAACAAGCCCTTGGGCTTaGGGACCAGGCTTCATCTCCAATCTCTCTGAGATG +
Preference number: 6 (lower is better)
Translates to: ECVAASITSPWA*GPGFISNLSEM
Trigger: CATCTCAGAGAGATTGGAGATGAAGCCTGGTCCGCAAGCCCAAGGGCTTGTTATGGAAGCAGCAACACATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS GCA 72 bp CCAGCCACTTTGAGTAACGAAAGCAGTGGCTTTAATTaGTCCAGAGCCTGGTGCACAAAGTCACAGTGGGCT +
Preference number: 6 (lower is better)
Translates to: PATLSNESSGFN*SRAWCTKSQWA
Trigger: AGCCCACTGTGACTTTGTGCACCAGGCTCTGGAGCAATTAAAGCCACTGCTTTCGTTACTCAAAGTGGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS GCA 72 bp AGAGACTCCGGGAAGAAGGTAAAAACCTGGAGTTGCTaGAGAACTCTGCTGTGCTCTTCGTGGAAGATGGCA +
Preference number: 6 (lower is better)
Translates to: RDSGKKVKTWSC*RTLLCSSWKMA
Trigger: TGCCATCTTCCACGAAGAGCACAGCAGAGTTCTGCAGCAACTCCAGGTTTTTACCTTCTTCCCGGAGTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS GCA 72 bp GGAAGAGACTCCGGGAAGAAGGTAAAAACCTGGAGTTaGTGCAGAACTCTGCTGTGCTCTTCGTGGAAGATG +
Preference number: 6 (lower is better)
Translates to: GRDSGKKVKTWS*CRTLLCSSWKM
Trigger: CATCTTCCACGAAGAGCACAGCAGAGTTCTGCAGCAACTCCAGGTTTTTACCTTCTTCCCGGAGTCTCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS GCA 72 bp GACATCCAAGTCTTGAGCAGCATTGAAGTTCCGTTCTaGCTGGAAGAGTTTTTCAGGGGGATACCTGGCCAG +
Preference number: 6 (lower is better)
Translates to: DIQVLSSIEVPF*LEEFFRGIPGQ
Trigger: CTGGCCAGGTATCCCCCTGAAAAACTCTTCCAGGCAGAACGGAACTTCAATGCTGCTCAAGACTTGGATGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS GCA 72 bp CTCTGTACTTCTGTCTTCCGGAGCCTGGGCTGTTCTTaGACATCCTTTGACGAGGTCTTGACTTTGCCCATT +
Preference number: 6 (lower is better)
Translates to: LCTSVFRSLGCS*TSFDEVLTLPI
Trigger: AATGGGCAAAGTCAAGACCTCGTCAAAGGATGTGCAAGAACAGCCCAGGCTCCGGAAGACAGAAGTACAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS GCA 72 bp CTGCAGACCATCCAGAAGGATCCTGCTGCCCCCATGTaGCTTTGTTCTTGGTATGTCAGTGCCATTATACTC +
Preference number: 6 (lower is better)
Translates to: LQTIQKDPAAPM*LCSWYVSAIIL
Trigger: GAGTATAATGGCACTGACATACCAAGAACAAAGGCACATGGGGGCAGCAGGATCCTTCTGGATGGTCTGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS CCA 72 bp TCGAGCAGACTGGCGGTCAATGGTTTTCCTCTCAAATaGCTTCTTGGTAGCTGGAAGAGACTCCGGGAAGAA +
Preference number: 6 (lower is better)
Translates to: SSRLAVNGFPLK*LLGSWKRLREE
Trigger: TTCTTCCCGGAGTCTCTTCCAGCTACCAAGAAGCCATTTGAGAGGAAAACCATTGACCGCCAGTCTGCTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS CCA 72 bp TTTTCCGTACACTCCCGTAGTCTTCATACTCCCAGCTaGAGTCCCAGTGCCTTTTCTCCTCCACTTCCCTTT +
Preference number: 6 (lower is better)
Translates to: FSVHSRSLHTPS*SPSAFSPPLPF
Trigger: AAAGGGAAGTGGAGGAGAAAAGGCACTGGGACTCCAGCTGGGAGTATGAAGACTACGGGAGTGTACGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS CAA 90 bp CTTGGTAGCTGGAAGAGACTCCGGGAAGAAGGTAAAAACCTGGAGTaGCTGCAGAACTCTGCTGTGCTCTTCGTGGAAGATGGCAATAAG +
Preference number: 6 (lower is better)
Translates to: LGSWKRLREEGKNLE*LQNSAVLFVEDGNK
Trigger: CTTATTGCCATCTTCCACGAAGAGCACAGCAGAGTTCTGCAGCAACTCCAGGTTTTTACCTTCTTCCCGGAGTCTCTTCCAGCTACCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS TCA 72 bp CTAGGTTGTGGAGCTGAGGACTTGATTGTCTGGGTTTaGCTACCCTTGAAGCTGAAACAGAAGAGCCCCTGT +
Preference number: 6 (lower is better)
Translates to: LGCGAEDLIVWV*LPLKLKQKSPC
Trigger: ACAGGGGCTCTTCTGTTTCAGCTTCAAGGGTAGTCAAACCCAGACAATCAAGTCCTCAGCTCCACAACCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS TCA 72 bp TTGGGCTTGCGGACCAGGCTTCATCTCCAATCTCTCTaGGATGGAGTAAACACTGGACGTGTGGTGCTTTTT +
Preference number: 6 (lower is better)
Translates to: LGLRTRLHLQSL*DGVNTGRVVLF
Trigger: AAAAAGCACCACACGTCCAGTGTTTACTCCATCTCAGAGAGATTGGAGATGAAGCCTGGTCCGCAAGCCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS TCA 72 bp TTAGGGCCTTTCTCCTTTCCGGCAGCTCCTGCTCGGTaGTTAACTTTGAGGAACCTCGGACAATATCCTTCT +
Preference number: 6 (lower is better)
Translates to: LGPFSFPAAPAR*LTLRNLGQYPS
Trigger: AGAAGGATATTGTCCGAGGTTCCTCAAAGTTAATCACCGAGCAGGAGCTGCCGGAAAGGAGAAAGGCCCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS TCA 72 bp TGGCTGACACGCTCAGCTCATTTGGGTTTCGTGCCTTaGAGGTGTAGACAGCAAAATAGACCTGGTTGCCTT +
Preference number: 6 (lower is better)
Translates to: WLTRSAHLGFVP*RCRQQNRPGCL
Trigger: AAGGCAACCAGGTCTATTTTGCTGTCTACACCTTCAAGGCACGAAACCCAAATGAGCTGAGCGTGTCAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS TCA 72 bp CCAGACACTCTTCTCGTTGCTCTAGTCGGAGCGCAGTaGGATGTGGAGTTATTTCAACCTCAGGATCCAATC +
Preference number: 6 (lower is better)
Translates to: PDTLLVALVGAQ*DVELFQPQDPI
Trigger: GATTGGATCCTGAGGTTGAAATAACTCCACATCTCACTGCGCTCCGACTAGAGCAACGAGAAGAGTGTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS GCA 72 bp GAAGGTGTAGACAGCAAAATAGACCTGGTTGCCTTCTaGCTCACTGCCATCTGGCTCTGTACTTCTGTCTTC +
Preference number: 6 (lower is better)
Translates to: EGVDSKIDLVAF*LTAIWLCTSVF
Trigger: GAAGACAGAAGTACAGAGCCAGATGGCAGTGAGGCAGAAGGCAACCAGGTCTATTTTGCTGTCTACACCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS CCA 72 bp CACAATCCCTTTTTCTGTAGGGCTGATGCTGTCCCTTaGCCCAGTACCTGGGATCCAAGTCATTTTCTCTGT +
Preference number: 6 (lower is better)
Translates to: HNPFFCRADAVP*PSTWDPSHFLC
Trigger: ACAGAGAAAATGACTTGGATCCCAGGTACTGGGCCAAGGGACAGCATCAGCCCTACAGAAAAAGGGATTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS CAA 72 bp GGCTGTTCTTGCACATCCTTTGACGAGGTCTTGACTTaGCCCATTTCGTCCTGGTACGGAGTAGCCAACTAT +
Preference number: 6 (lower is better)
Translates to: GCSCTSFDEVLT*PISSWYGVANY
Trigger: ATAGTTGGCTACTCCGTACCAGGACGAAATGGGCAAAGTCAAGACCTCGTCAAAGGATGTGCAAGAACAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS CAA 90 bp GAGAATCACCAGGTCACCTCGATGGAGGGGAAGATTATCCAACTCTaGGGATGTGAATTCACAAATGCACACAAACAGCCTCTCTCCCTC +
Preference number: 6 (lower is better)
Translates to: ENHQVTSMEGKIIQL*GCEFTNAHKQPLSL
Trigger: GAGGGAGAGAGGCTGTTTGTGTGCATTTGTGAATTCACATCCCAAGAGTTGGATAATCTTCCCCTCCATCGAGGTGACCTGGTGATTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS CAA 90 bp TTTCGAGCAGACTGGCGGTCAATGGTTTTCCTCTCAAATGGCTTCTaGGTAGCTGGAAGAGACTCCGGGAAGAAGGTAAAAACCTGGAGT +
Preference number: 6 (lower is better)
Translates to: FRADWRSMVFLSNGF*VAGRDSGKKVKTWS
Trigger: ACTCCAGGTTTTTACCTTCTTCCCGGAGTCTCTTCCAGCTACCAAGAAGCCATTTGAGAGGAAAACCATTGACCGCCAGTCTGCTCGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS TCA 72 bp TCCTGCTTCTCCTCCAGCATGAGGTTTAGCTCTTCTTaGGCTCTACTGTACATATCCAAGTCCCGCTCCATT +
Preference number: 6 (lower is better)
Translates to: SCFSSSMRFSSS*ALLYISKSRSI
Trigger: AATGGAGCGGGACTTGGATATGTACAGTAGAGCTCAAGAAGAGCTAAACCTCATGCTGGAGGAGAAGCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS TCA 72 bp ACCAGGTCACCTTCCAAAAGTGAGACATCCAAGTCTTaGGCAGCATTGAAGTTCCGTTCTGCCTGGAAGAGT +
Preference number: 6 (lower is better)
Translates to: TRSPSKSETSKS*AALKFRSAWKS
Trigger: ACTCTTCCAGGCAGAACGGAACTTCAATGCTGCTCAAGACTTGGATGTCTCACTTTTGGAAGGTGACCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS CCA 72 bp GCTTCAGAAATAATGCAGTCAGGCTCCTCGGCCTCATaGTCACTGGTTTCATGTCTTTGTTCCTCTACTCCT +
Preference number: 6 (lower is better)
Translates to: ASEIMQSGSSAS*SLVSCLCSSTP
Trigger: AGGAGTAGAGGAACAAAGACATGAAACCAGTGACCATGAGGCCGAGGAGCCTGACTGCATTATTTCTGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS CCA 72 bp GCAAGGACTGCATTGGTTAAAGGCACTTTATCTGGGTaGGATTCTGGGGTGGAATTCAGCAACTCCATTAGC +
Preference number: 6 (lower is better)
Translates to: ARTALVKGTLSG*DSGVEFSNSIS
Trigger: GCTAATGGAGTTGCTGAATTCCACCCCAGAATCCCACCCAGATAAAGTGCCTTTAACCAATGCAGTCCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS CCA 72 bp TCCTTTGACGAGGTCTTGACTTTGCCCATTTCGTCCTaGTACGGAGTAGCCAACTATTTCTGGATGCCTGAA +
Preference number: 6 (lower is better)
Translates to: SFDEVLTLPISS*YGVANYFWMPE
Trigger: TTCAGGCATCCAGAAATAGTTGGCTACTCCGTACCAGGACGAAATGGGCAAAGTCAAGACCTCGTCAAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS CCA 72 bp ACGATAATGACCAGTCACCTCTCCTTCCTCAAGTCTTaGTTCATGCTGTCGCCATCTCAAAGACAACTGTCC +
Preference number: 6 (lower is better)
Translates to: TIMTSHLSFLKS*FMLSPSQRQLS
Trigger: GGACAGTTGTCTTTGAGATGGCGACAGCATGAACCAAGACTTGAGGAAGGAGAGGTGACTGGTCATTATCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472036.1
CDS CAA 72 bp GACCATCCAGAAGGATCCTGCTGCCCCCATGTGCCTTaGTTCTTGGTATGTCAGTGCCATTATACTCCAAAT +
Preference number: 6 (lower is better)
Translates to: DHPEGSCCPHVP*FLVCQCHYTPN
Trigger: ATTTGGAGTATAATGGCACTGACATACCAAGAACAAAGGCACATGGGGGCAGCAGGATCCTTCTGGATGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS CAA 90 bp AGTCCTCAGGATTATAATTCAGATTCTTACAGTCTGAGTAGCCATTaGCCTCCCCGTATCCACCAGCTTTCGAGGTCACATCTGGGCTTC +
Preference number: 6 (lower is better)
Translates to: SPQDYNSDSYSLSSH*PPRIHQLSRSHLGF
Trigger: GAAGCCCAGATGTGACCTCGAAAGCTGGTGGATACGGGGAGGCAAATGGCTACTCAGACTGTAAGAATCTGAATTATAATCCTGAGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS CAA 90 bp GCAGACCATCCAGAAGGATCCTGCTGCCCCCATGTGCCTTTGTTCTaGGTATGTCAGTGCCATTATACTCCAAATTCTCCATTTGATGGA +
Preference number: 6 (lower is better)
Translates to: ADHPEGSCCPHVPLF*VCQCHYTPNSPFDG
Trigger: TCCATCAAATGGAGAATTTGGAGTATAATGGCACTGACATACCAAGAACAAAGGCACATGGGGGCAGCAGGATCCTTCTGGATGGTCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS CAA 90 bp GAGTCTGCAGACCATCCAGAAGGATCCTGCTGCCCCCATGTGCCTTaGTTCTTGGTATGTCAGTGCCATTATACTCCAAATTCTCCATTT +
Preference number: 6 (lower is better)
Translates to: ESADHPEGSCCPHVP*FLVCQCHYTPNSPF
Trigger: AAATGGAGAATTTGGAGTATAATGGCACTGACATACCAAGAACAAAGGCACATGGGGGCAGCAGGATCCTTCTGGATGGTCTGCAGACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS TCA 72 bp ATTAACAATGCAGTCATCTTGATTTCCAGAACTTACTaGCTCATCCACAGTCCTCAGGGGCCCCAACAGCTC +
Preference number: 6 (lower is better)
Translates to: INNAVILISRTY*LIHSPQGPQQL
Trigger: GAGCTGTTGGGGCCCCTGAGGACTGTGGATGAGTCAGTAAGTTCTGGAAATCAAGATGACTGCATTGTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS TCA 72 bp GACTACTCTCTGAATTACTCGGATTTAGGGATGCACTaGGAGTTCCTTGGTCACATTCTTTTGGCGGAGGAG +
Preference number: 6 (lower is better)
Translates to: DYSLNYSDLGMH*EFLGHILLAEE
Trigger: CTCCTCCGCCAAAAGAATGTGACCAAGGAACTCTCAGTGCATCCCTAAATCCGAGTAATTCAGAGAGTAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS GCA 72 bp TGGTTCATGCTGTCGCCATCTCAAAGACAACTGTCCTaGCATGTTACTGATCCTCAAAACCTGGTTTCCCAT +
Preference number: 6 (lower is better)
Translates to: WFMLSPSQRQLS*HVTDPQNLVSH
Trigger: ATGGGAAACCAGGTTTTGAGGATCAGTAACATGGCAGGACAGTTGTCTTTGAGATGGCGACAGCATGAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472036.1
CDS GCA 72 bp AAAATGTCTCCCAACCATTCCAGACACTCTTCTCGTTaGTCTAGTCGGAGCGCAGTGAGATGTGGAGTTATT +
Preference number: 6 (lower is better)
Translates to: KMSPNHSRHSSR*SSRSAVRCGVI
Trigger: AATAACTCCACATCTCACTGCGCTCCGACTAGAGCAACGAGAAGAGTGTCTGGAATGGTTGGGAGACATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS CCA 72 bp GTCAATGGTTTTCCTCTCAAATGGCTTCTTGGTAGCTaGAAGAGACTCCGGGAAGAAGGTAAAAACCTGGAG +
Preference number: 6 (lower is better)
Translates to: VNGFPLKWLLGS*KRLREEGKNLE
Trigger: CTCCAGGTTTTTACCTTCTTCCCGGAGTCTCTTCCAGCTACCAAGAAGCCATTTGAGAGGAAAACCATTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS CAA 72 bp TACGATAATGACCAGTCACCTCTCCTTCCTCAAGTCTaGGTTCATGCTGTCGCCATCTCAAAGACAACTGTC +
Preference number: 6 (lower is better)
Translates to: YDNDQSPLLPQV*VHAVAISKTTV
Trigger: GACAGTTGTCTTTGAGATGGCGACAGCATGAACCAAGACTTGAGGAAGGAGAGGTGACTGGTCATTATCGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472036.1
CDS CAA 90 bp ATAATACTGGCTTTTCTGCAAGTTGGGATGAAAAGGGACCTGAGGTaGGGAGGAAATACCATTGACTACTTCTGTAGGGTCAGATGTGGG +
Preference number: 6 (lower is better)
Translates to: IILAFLQVGMKRDLR*GGNTIDYFCRVRCG
Trigger: CCCACATCTGACCCTACAGAAGTAGTCAATGGTATTTCCTCCCAACCTCAGGTCCCTTTTCATCCCAACTTGCAGAAAAGCCAGTATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS CAA 72 bp ATGTTAACGTTGATTTCCTTGACCGCAAGGACTGCATaGGTTAAAGGCACTTTATCTGGGTGGGATTCTGGG +
Preference number: 6 (lower is better)
Translates to: MLTLISLTARTA*VKGTLSGWDSG
Trigger: CCCAGAATCCCACCCAGATAAAGTGCCTTTAACCAATGCAGTCCTTGCGGTCAAGGAAATCAACGTTAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS TCA 72 bp CTGCTCTTGATGATTCATCCTGCTTCTCCTCCAGCATaGGGTTTAGCTCTTCTTGAGCTCTACTGTACATAT +
Preference number: 6 (lower is better)
Translates to: LLLMIHPASPPA*GLALLELYCTY
Trigger: ATATGTACAGTAGAGCTCAAGAAGAGCTAAACCTCATGCTGGAGGAGAAGCAGGATGAATCATCAAGAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS TCA 72 bp ATCTTTAAACTCGAGGATCTTGAGTTTCTGATTGGCTaGCACGCTCAGCTCATTTGGGTTTCGTGCCTTGAA +
Preference number: 6 (lower is better)
Translates to: IFKLEDLEFLIG*HAQLIWVSCLE
Trigger: TTCAAGGCACGAAACCCAAATGAGCTGAGCGTGTCAGCCAATCAGAAACTCAAGATCCTCGAGTTTAAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS TCA 72 bp CCTGTAACATCTTTAAACTCGAGGATCTTGAGTTTCTaGTTGGCTGACACGCTCAGCTCATTTGGGTTTCGT +
Preference number: 6 (lower is better)
Translates to: PVTSLNSRILSF*LADTLSSFGFR
Trigger: ACGAAACCCAAATGAGCTGAGCGTGTCAGCCAATCAGAAACTCAAGATCCTCGAGTTTAAAGATGTTACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS TCA 72 bp AGAGTCCTCAGGATTATAATTCAGATTCTTACAGTCTaGGTAGCCATTTGCCTCCCCGTATCCACCAGCTTT +
Preference number: 6 (lower is better)
Translates to: RVLRIIIQILTV*VAICLPVSTSF
Trigger: AAAGCTGGTGGATACGGGGAGGCAAATGGCTACTCAGACTGTAAGAATCTGAATTATAATCCTGAGGACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS GCA 72 bp CCTACAGCATCGCTGATTTCCAGAGCAGCCAATAATTaGTTCGAGACCTTAATCACCATCTGCATATTTCCA +
Preference number: 6 (lower is better)
Translates to: PTASLISRAANN*FETLITICIFP
Trigger: TGGAAATATGCAGATGGTGATTAAGGTCTCGAAGCAATTATTGGCTGCTCTGGAAATCAGCGATGCTGTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS CAA 72 bp GATTATAATTCAGATTCTTACAGTCTGAGTAGCCATTaGCCTCCCCGTATCCACCAGCTTTCGAGGTCACAT +
Preference number: 6 (lower is better)
Translates to: DYNSDSYSLSSH*PPRIHQLSRSH
Trigger: ATGTGACCTCGAAAGCTGGTGGATACGGGGAGGCAAATGGCTACTCAGACTGTAAGAATCTGAATTATAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS TCA 72 bp GGGGTATCTACTTCACCATTAACAATGCAGTCATCTTaGTTTCCAGAACTTACTGACTCATCCACAGTCCTC +
Preference number: 6 (lower is better)
Translates to: GVSTSPLTMQSS*FPELTDSSTVL
Trigger: GAGGACTGTGGATGAGTCAGTAAGTTCTGGAAATCAAGATGACTGCATTGTTAATGGTGAAGTAGATACCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS CCA 72 bp TCTTCTCATCCTTCTCGTAGATTTCAAGCAGCGCAATaGCCTCATCATGATTCTGGCAGTAAATCTTGTATG +
Preference number: 6 (lower is better)
Translates to: SSHPSRRFQAAQ*PHHDSGSKSCM
Trigger: CATACAAGATTTACTGCCAGAATCATGATGAGGCCATTGCGCTGCTTGAAATCTACGAGAAGGATGAGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS CAA 90 bp TGCTGGAGTTCCATATTCAAACTTTCAATGTTACTTTCACAGAACTaGAGATCCTCGAGGGTCTCTGCTCTTGATGATTCATCCTGCTTC +
Preference number: 6 (lower is better)
Translates to: CWSSIFKLSMLLSQN*RSSRVSALDDSSCF
Trigger: GAAGCAGGATGAATCATCAAGAGCAGAGACCCTCGAGGATCTCAAGTTCTGTGAAAGTAACATTGAAAGTTTGAATATGGAACTCCAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324109.9
CDS CAA 90 bp AGGTCCTTTCGCCGTTTATATTCATTAATGTTAACGTTGATTTCCTaGACCGCAAGGACTGCATTGGTTAAAGGCACTTTATCTGGGTGG +
Preference number: 6 (lower is better)
Translates to: RSFRRLYSLMLTLIS*TARTALVKGTLSGW
Trigger: CCACCCAGATAAAGTGCCTTTAACCAATGCAGTCCTTGCGGTCAAGGAAATCAACGTTAACATTAATGAATATAAACGGCGAAAGGACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS TCA 72 bp GGTATGTCAGTGCCATTATACTCCAAATTCTCCATTTaGTGGAGAGAATCTGTCCCTCTGGAATTACGAGAT +
Preference number: 6 (lower is better)
Translates to: GMSVPLYSKFSI*WRESVPLELRD
Trigger: ATCTCGTAATTCCAGAGGGACAGATTCTCTCCATCAAATGGAGAATTTGGAGTATAATGGCACTGACATACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS CAA 90 bp TTGAGGACCAGGTCCTTTCGCCGTTTATATTCATTAATGTTAACGTaGATTTCCTTGACCGCAAGGACTGCATTGGTTAAAGGCACTTTA +
Preference number: 6 (lower is better)
Translates to: LRTRSFRRLYSLMLT*ISLTARTALVKGTL
Trigger: TAAAGTGCCTTTAACCAATGCAGTCCTTGCGGTCAAGGAAATCAACGTTAACATTAATGAATATAAACGGCGAAAGGACCTGGTCCTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS CAA 90 bp CAGTTAGGACAGACACAAGTCAGAACAGACAGAACTTTCCAGCTTTaGTCATACATTCCAAGACTGAATAGCAGTCTTGGAAAAATGAGT +
Preference number: 6 (lower is better)
Translates to: QLGQTQVRTDRTFQL*SYIPRLNSSLGKMS
Trigger: ACTCATTTTTCCAAGACTGCTATTCAGTCTTGGAATGTATGACAAAAGCTGGAAAGTTCTGTCTGTTCTGACTTGTGTCTGTCCTAACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472036.1
CDS CAA 72 bp CGCCGTTTATATTCATTAATGTTAACGTTGATTTCCTaGACCGCAAGGACTGCATTGGTTAAAGGCACTTTA +
Preference number: 6 (lower is better)
Translates to: RRLYSLMLTLIS*TARTALVKGTL
Trigger: TAAAGTGCCTTTAACCAATGCAGTCCTTGCGGTCAAGGAAATCAACGTTAACATTAATGAATATAAACGGCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS CAA 72 bp AGGTCCTTTCGCCGTTTATATTCATTAATGTTAACGTaGATTTCCTTGACCGCAAGGACTGCATTGGTTAAA +
Preference number: 6 (lower is better)
Translates to: RSFRRLYSLMLT*ISLTARTALVK
Trigger: TTTAACCAATGCAGTCCTTGCGGTCAAGGAAATCAACGTTAACATTAATGAATATAAACGGCGAAAGGACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS GCA 72 bp GCAGCCAATAATTGCTTCGAGACCTTAATCACCATCTaGATATTTCCAAAAAGTCCCTCAAAATCAATGTTT +
Preference number: 6 (lower is better)
Translates to: AANNCFETLITI*IFPKSPSKSMF
Trigger: AAACATTGATTTTGAGGGACTTTTTGGAAATATGCAGATGGTGATTAAGGTCTCGAAGCAATTATTGGCTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324109.9
ENST00000543621.6
ENST00000636706.1
CDS CAA 90 bp CTGATCCATAATATGAGTCTTTGCTTTGGGATACATGTTGTCATTTaGATGAACATTCCTGTCCCCTTCATGGTATTTGATAAATTCCTT +
Preference number: 6 (lower is better)
Translates to: LIHNMSLCFGIHVVI*MNIPVPFMVFDKFL
Trigger: AAGGAATTTATCAAATACCATGAAGGGGACAGGAATGTTCATCAAAATGACAACATGTATCCCAAAGCAAAGACTCATATTATGGATCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636706.1
CDS CAA 72 bp AATATGAGTCTTTGCTTTGGGATACATGTTGTCATTTaGATGAACATTCCTGTCCCCTTCATGGTATTTGAT +
Preference number: 6 (lower is better)
Translates to: NMSLCFGIHVVI*MNIPVPFMVFD
Trigger: ATCAAATACCATGAAGGGGACAGGAATGTTCATCAAAATGACAACATGTATCCCAAAGCAAAGACTCATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636706.1