RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DNM3 (Homo sapiens)

Ensembl gene IDs: ENSG00000197959

Ensembl transcript IDs: ENST00000355305.9, ENST00000367731.5, ENST00000367733.6, ENST00000485254.2, ENST00000491124.1, ENST00000520906.5, ENST00000523513.1, ENST00000627582.3

Found 705 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCAAAAGGCTCGCCCCATCCTTCAAGGCCTACATCACCTGGTCCCTaGCCTCTTTCCTTGTTAACCAACTACCACCTTTGTCTTCCCTCA +
Preference number: 1 (lower is better)
Translates to: SKGSPHPSRPTSPGP*PLSLLTNYHLCLPS
Trigger: TGAGGGAAGACAAAGGTGGTAGTTGGTTAACAAGGAAAGAGGTCAGGGACCAGGTGATGTAGGCCTTGAAGGATGGGGCGAGCCTTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR GCA 90 bp TCACTCCCTTGTTTAATGTCTGCTCCAGTGGGGGCAGGACTTTATTaGTATTGTTCACCTCTGTATCACCAGGGCCTAGAATGGCAGCTG +
Preference number: 1 (lower is better)
Translates to: SLPCLMSAPVGAGLY*YCSPLYHQGLEWQL
Trigger: CAGCTGCCATTCTAGGCCCTGGTGATACAGAGGTGAACAATAGCAATAAAGTCCTGCCCCCACTGGAGCAGACATTAAACAAGGGAGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR CCA 90 bp AACCAACTACCACCTTTGTCTTCCCTCACAGTGTTCCAGACACACTaGCCTTGCTGCTCCTCTAAGACACTGAGCTTGGTTTTGCACTTG +
Preference number: 1 (lower is better)
Translates to: NQLPPLSSLTVFQTH*PCCSSKTLSLVLHL
Trigger: CAAGTGCAAAACCAAGCTCAGTGTCTTAGAGGAGCAGCAAGGCCAGTGTGTCTGGAACACTGTGAGGGAAGACAAAGGTGGTAGTTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR TCA 90 bp AATGCTGAGATGCCTGGAATTCATCTTCATAAGTCCTCTGTGGGATaGGGTTGGCTTGGACAACTCCAGGCATCTCTGGGATTCTTGCCT +
Preference number: 1 (lower is better)
Translates to: NAEMPGIHLHKSSVG*GWLGQLQASLGFLP
Trigger: AGGCAAGAATCCCAGAGATGCCTGGAGTTGTCCAAGCCAACCTCATCCCACAGAGGACTTATGAAGATGAATTCCAGGCATCTCAGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
3UTR GCA 90 bp TCAGTGTCTCTGCTGCTAACACCCAGGAACATGTCAATGCTGAGATaGCTGGAATTCATCTTCATAAGTCCTCTGTGGGATGAGGTTGGC +
Preference number: 1 (lower is better)
Translates to: SVSLLLTPRNMSMLR*LEFIFISPLWDEVG
Trigger: GCCAACCTCATCCCACAGAGGACTTATGAAGATGAATTCCAGGCATCTCAGCATTGACATGTTCCTGGGTGTTAGCAGCAGAGACACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
3UTR CCA 90 bp AGTGTCATGGGACACCCCTACTCAGTGAATACTTGCTCTGCTGTCTaGGAACAGTTAGCACACAAAATTCCAGTTGGCTTCTGGCTGTTT +
Preference number: 1 (lower is better)
Translates to: SVMGHPYSVNTCSAV*EQLAHKIPVGFWLF
Trigger: AAACAGCCAGAAGCCAACTGGAATTTTGTGTGCTAACTGTTCCCAGACAGCAGAGCAAGTATTCACTGAGTAGGGGTGTCCCATGACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
3UTR CCA 90 bp ATGTCAATGCTGAGATGCCTGGAATTCATCTTCATAAGTCCTCTGTaGGATGAGGTTGGCTTGGACAACTCCAGGCATCTCTGGGATTCT +
Preference number: 1 (lower is better)
Translates to: MSMLRCLEFIFISPL*DEVGLDNSRHLWDS
Trigger: AGAATCCCAGAGATGCCTGGAGTTGTCCAAGCCAACCTCATCCCACAGAGGACTTATGAAGATGAATTCCAGGCATCTCAGCATTGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
3UTR TCA 90 bp AATACTCTTCTTCAGACTTCCAGATCCTTTACTCCCTCCCTTCTTTaGAGAGCCTGCTCTAATGTCAACTCTTCAAAGAGGCCTTCCCTC +
Preference number: 1 (lower is better)
Translates to: NTLLQTSRSFTPSLL*RACSNVNSSKRPSL
Trigger: GAGGGAAGGCCTCTTTGAAGAGTTGACATTAGAGCAGGCTCTTCAAAGAAGGGAGGGAGTAAAGGATCTGGAAGTCTGAAGAAGAGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR TCA 90 bp GTTAGCACACAAAATTCCAGTTGGCTTCTGGCTGTTTCCTACATGTaGATCATCTGGTCCTTGGTAGTCCAAAACTTAGCCTCAAGACTT +
Preference number: 1 (lower is better)
Translates to: VSTQNSSWLLAVSYM*IIWSLVVQNLASRL
Trigger: AAGTCTTGAGGCTAAGTTTTGGACTACCAAGGACCAGATGATTCACATGTAGGAAACAGCCAGAAGCCAACTGGAATTTTGTGTGCTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
3UTR GCA 90 bp TCAATACCCTTTTCTGGAGTGACCTGGATAGGGACTTTGAAATACTaGAACTGTAAAAGTGTGAGCTCTGCTCTTATCCCATGCCATTTC +
Preference number: 1 (lower is better)
Translates to: SIPFSGVTWIGTLKY*NCKSVSSALIPCHF
Trigger: GAAATGGCATGGGATAAGAGCAGAGCTCACACTTTTACAGTTGCAGTATTTCAAAGTCCCTATCCAGGTCACTCCAGAAAAGGGTATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
3UTR GCA 90 bp GTAAGCACCTGGAATGTAAATATAAGTGGTGTGACACAACAGCCCTaGTTGAACTCACATGCTTTACTACCTCTCATCATTCTCAACCAT +
Preference number: 1 (lower is better)
Translates to: VSTWNVNISGVTQQP*LNSHALLPLIILNH
Trigger: ATGGTTGAGAATGATGAGAGGTAGTAAAGCATGTGAGTTCAAGCAGGGCTGTTGTGTCACACCACTTATATTTACATTCCAGGTGCTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR TCA 90 bp TCATGTTTGCTACTTTCAAAGGGAGACATTTCAGTTGGTGAAACCTaGTTTACTTCTGTAGAATATGAAATAGTGTCATGGGACACCCCT +
Preference number: 1 (lower is better)
Translates to: SCLLLSKGDISVGET*FTSVEYEIVSWDTP
Trigger: AGGGGTGTCCCATGACACTATTTCATATTCTACAGAAGTAAATCAGGTTTCACCAACTGAAATGTCTCCCTTTGAAAGTAGCAAACATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
3UTR TCA 90 bp GCAAATATCTACGCATATAACAGGAGAACAACTCGACAACAATTATaGAAATCATATATGCGTGCTTCTGTACTCCTGGCTATTGACAGG +
Preference number: 1 (lower is better)
Translates to: ANIYAYNRRTTRQQL*KSYMRASVLLAIDR
Trigger: CCTGTCAATAGCCAGGAGTACAGAAGCACGCATATATGATTTTCATAATTGTTGTCGAGTTGTTCTCCTGTTATATGCGTAGATATTTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR CCA 90 bp TTTGCTTTAGATTTCAACGTTTCAATACCCTTTTCTGGAGTGACCTaGATAGGGACTTTGAAATACTGCAACTGTAAAAGTGTGAGCTCT +
Preference number: 1 (lower is better)
Translates to: FALDFNVSIPFSGVT*IGTLKYCNCKSVSS
Trigger: AGAGCTCACACTTTTACAGTTGCAGTATTTCAAAGTCCCTATCCAGGTCACTCCAGAAAAGGGTATTGAAACGTTGAAATCTAAAGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
3UTR GCA 90 bp CAACTGTGGGACTATAATCTAAAAGCAAGTGCCAAAGATGACAAATaGCATTGTTTATTACTGCCTAAGATCAGTGGAAGGAAAATTGGA +
Preference number: 1 (lower is better)
Translates to: QLWDYNLKASAKDDK*HCLLLPKISGRKIG
Trigger: TCCAATTTTCCTTCCACTGATCTTAGGCAGTAATAAACAATGGCATTTGTCATCTTTGGCACTTGCTTTTAGATTATAGTCCCACAGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
3UTR GCA 90 bp ATTATAAGTGAAAATATAGTGCTTACTTGTACCTGCCCTGTTCAATaGTTTCCCTGCATTATCTCATTCAATCCTATCAACCGCCCTATA +
Preference number: 1 (lower is better)
Translates to: IISENIVLTCTCPVQ*FPCIISFNPINRPI
Trigger: TATAGGGCGGTTGATAGGATTGAATGAGATAATGCAGGGAAAGCATTGAACAGGGCAGGTACAAGTAAGCACTATATTTTCACTTATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR CCA 90 bp GCATTAATGGTAGACAACAGAATTACTGTCATCCTAAACAGAATGTaGGAAAAGAAATATGTATGGCTTAGGTCTAAGCCCACTATCTCA +
Preference number: 1 (lower is better)
Translates to: ALMVDNRITVILNRM*EKKYVWLRSKPTIS
Trigger: TGAGATAGTGGGCTTAGACCTAAGCCATACATATTTCTTTTCCCACATTCTGTTTAGGATGACAGTAATTCTGTTGTCTACCATTAATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
3UTR CCA 90 bp GAGCTCACAGCTAGTAGTCTTCTAATTGAAATGATACAAAACTCATaGCTTAAGTCTCATACACTATCTTCTTTCATGAGTTCAACAGTT +
Preference number: 1 (lower is better)
Translates to: ELTASSLLIEMIQNS*LKSHTLSSFMSSTV
Trigger: AACTGTTGAACTCATGAAAGAAGATAGTGTATGAGACTTAAGCCATGAGTTTTGTATCATTTCAATTAGAAGACTACTAGCTGTGAGCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
3UTR CAA 90 bp ATCACCTGGTCCCTGACCTCTTTCCTTGTTAACCAACTACCACCTTaGTCTTCCCTCACAGTGTTCCAGACACACTGGCCTTGCTGCTCC +
Preference number: 2 (lower is better)
Translates to: ITWSLTSFLVNQLPP*SSLTVFQTHWPCCS
Trigger: GGAGCAGCAAGGCCAGTGTGTCTGGAACACTGTGAGGGAAGACAAAGGTGGTAGTTGGTTAACAAGGAAAGAGGTCAGGGACCAGGTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR CAA 90 bp CCCTTGTTTAATGTCTGCTCCAGTGGGGGCAGGACTTTATTGCTATaGTTCACCTCTGTATCACCAGGGCCTAGAATGGCAGCTGGCAAA +
Preference number: 2 (lower is better)
Translates to: PLFNVCSSGGRTLLL*FTSVSPGPRMAAGK
Trigger: TTTGCCAGCTGCCATTCTAGGCCCTGGTGATACAGAGGTGAACAATAGCAATAAAGTCCTGCCCCCACTGGAGCAGACATTAAACAAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR-3UTR TCA 90 bp CAAGAGCTCACCAAGCCTTCAAAGCTTCTTCCTTCCCTACAGAGAGCATCCTATAAGTCCTCTGTGGGATaGGGTTGGCTTGGACAACTC +
Preference number: 2 (lower is better)
Translates to: QELTKPSKLLPSLQRASYKSSVG*GWLGQL
Trigger: GAGTTGTCCAAGCCAACCTCATCCCACAGAGGACTT...ATAGGATGCTCTCTGTAGGGAAGGAAGAAGCTTTGAAGGCTTGGTGAGCTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
3UTR CAA 90 bp TTCACTCCCTTGTTTAATGTCTGCTCCAGTGGGGGCAGGACTTTATaGCTATTGTTCACCTCTGTATCACCAGGGCCTAGAATGGCAGCT +
Preference number: 2 (lower is better)
Translates to: FTPLFNVCSSGGRTL*LLFTSVSPGPRMAA
Trigger: AGCTGCCATTCTAGGCCCTGGTGATACAGAGGTGAACAATAGCAATAAAGTCCTGCCCCCACTGGAGCAGACATTAAACAAGGGAGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR-3UTR GCA 90 bp CTTCCAGATCCTTTACTCCCTCCCTTCTTTGAAGAGCCTGCTCTAATGTCAACTCCCTTGTTTAATGTCTaGTCCAGTGGGGGCAGGACT +
Preference number: 2 (lower is better)
Translates to: LPDPLLPPFFEEPALMSTPLFNV*SSGGRT
Trigger: AGTCCTGCCCCCACTGGAGCAGACATTAAACAAGGG...AGTTGACATTAGAGCAGGCTCTTCAAAGAAGGGAGGGAGTAAAGGATCTGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR-3UTR CCA 90 bp AACCAACTACCACCTTTGTCTTCCCTCACAGTGTTCCAGACACACTGGCCTTGCGTGCTTCTGTACTCCTaGCTATTGACAGGAAAGCAT +
Preference number: 2 (lower is better)
Translates to: NQLPPLSSLTVFQTHWPCVLLYS*LLTGKH
Trigger: ATGCTTTCCTGTCAATAGCCAGGAGTACAGAAGCAC...GCAAGGCCAGTGTGTCTGGAACACTGTGAGGGAAGACAAAGGTGGTAGTTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR-3UTR CCA 90 bp AGGCTCGCCCCATCCTTCAAGGCCTACATCACCTGGTCCCTGACCTCTTTCCTTACACACTACCATCAATaGATAGGGAAGAGTAATAAG +
Preference number: 2 (lower is better)
Translates to: RLAPSFKAYITWSLTSFLTHYHQ*IGKSNK
Trigger: CTTATTACTCTTCCCTATCCATTGATGGTAGTGTGT...AAGGAAAGAGGTCAGGGACCAGGTGATGTAGGCCTTGAAGGATGGGGCGAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR CAA 90 bp GCCTGCTCTAATGTCAACTCTTCAAAGAGGCCTTCCCTCATCACCTaGACAAAAATAAAGCTTGCCTGCCCCTTACTCTCACTGTCTGTC +
Preference number: 2 (lower is better)
Translates to: ACSNVNSSKRPSLIT*TKIKLACPLLSLSV
Trigger: GACAGACAGTGAGAGTAAGGGGCAGGCAAGCTTTATTTTTGTCAAGGTGATGAGGGAAGGCCTCTTTGAAGAGTTGACATTAGAGCAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR CAA 90 bp CAGACACACTGGCCTTGCTGCTCCTCTAAGACACTGAGCTTGGTTTaGCACTTGCTATCTTCTGCCAAGAATACTCTTCTTCAGACTTCC +
Preference number: 2 (lower is better)
Translates to: QTHWPCCSSKTLSLV*HLLSSAKNTLLQTS
Trigger: GGAAGTCTGAAGAAGAGTATTCTTGGCAGAAGATAGCAAGTGCAAAACCAAGCTCAGTGTCTTAGAGGAGCAGCAAGGCCAGTGTGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR CAA 90 bp GTGTTCCAGACACACTGGCCTTGCTGCTCCTCTAAGACACTGAGCTaGGTTTTGCACTTGCTATCTTCTGCCAAGAATACTCTTCTTCAG +
Preference number: 2 (lower is better)
Translates to: VFQTHWPCCSSKTLS*VLHLLSSAKNTLLQ
Trigger: CTGAAGAAGAGTATTCTTGGCAGAAGATAGCAAGTGCAAAACCAAGCTCAGTGTCTTAGAGGAGCAGCAAGGCCAGTGTGTCTGGAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR-3UTR TCA 90 bp TCACCAAGCCTTCAAAGCTTCTTCCTTCCCTACAGAGAGCATCCTATACCTTCCGCCTTTATTTGTGGTTaGAAGCATAGGCTCTGGAGC +
Preference number: 2 (lower is better)
Translates to: SPSLQSFFLPYREHPIPSAFICG*KHRLWS
Trigger: GCTCCAGAGCCTATGCTTTCAACCACAAATAAAGGC...GGAAGGTATAGGATGCTCTCTGTAGGGAAGGAAGAAGCTTTGAAGGCTTGGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
3UTR-3UTR CCA 90 bp CAAGAGCTCACCAAGCCTTCAAAGCTTCTTCCTTCCCTACAGAGAGCATCCTATTTCATAAGTCCTCTGTaGGATGAGGTTGGCTTGGAC +
Preference number: 2 (lower is better)
Translates to: QELTKPSKLLPSLQRASYFISPL*DEVGLD
Trigger: GTCCAAGCCAACCTCATCCCACAGAGGACTTATGAA...ATAGGATGCTCTCTGTAGGGAAGGAAGAAGCTTTGAAGGCTTGGTGAGCTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
3UTR-3UTR TCA 90 bp CAGAGAGCATCCTATACCTTCCAATGGGCTTATTTTCAGGACTCACAGAGCCAGGGAACATGTCAATGCTaGGATGCCTGGAATTCATCT +
Preference number: 2 (lower is better)
Translates to: QRASYTFQWAYFQDSQSQGTCQC*DAWNSS
Trigger: AGATGAATTCCAGGCATCTCAGCATTGACATGTTCC...CTGGCTCTGTGAGTCCTGAAAATAAGCCCATTGGAAGGTATAGGATGCTCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367733.6
3UTR-3UTR CCA 90 bp TATTCACTCCCTTGTTTAATGTCTGCTCCAGTGGGGGCAGGACTTTATTGCTATGAGAGGTCCACTCAGTaGCAGAGTCTGTTTAACGGT +
Preference number: 2 (lower is better)
Translates to: YSLPCLMSAPVGAGLYCYERSTQ*QSLFNG
Trigger: ACCGTTAAACAGACTCTGCCACTGAGTGGACCTCTC...ATAGCAATAAAGTCCTGCCCCCACTGGAGCAGACATTAAACAAGGGAGTGAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR-3UTR TCA 90 bp AACCAACTACCACCTTTGTCTTCCCTCACAGTGTTCCAGACACACTGGCCTTGCGTAAAAGTGGTACTCTaGTGTTTAATGACTTCTCAC +
Preference number: 2 (lower is better)
Translates to: NQLPPLSSLTVFQTHWPCVKVVL*CLMTSH
Trigger: GTGAGAAGTCATTAAACATCAGAGTACCACTTTTAC...GCAAGGCCAGTGTGTCTGGAACACTGTGAGGGAAGACAAAGGTGGTAGTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR-3UTR CCA 90 bp TATTCACTCCCTTGTTTAATGTCTGCTCCAGTGGGGGCAGGACTTTATTGCTATGAGAGGACGACATTTTaGTGCAAGTCCTCAATCCTG +
Preference number: 2 (lower is better)
Translates to: YSLPCLMSAPVGAGLYCYERTTF*CKSSIL
Trigger: CAGGATTGAGGACTTGCACCAAAATGTCGTCCTCTC...ATAGCAATAAAGTCCTGCCCCCACTGGAGCAGACATTAAACAAGGGAGTGAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR-3UTR TCA 90 bp AAAATTCCAGTTGGCTTCTGGCTGTTTCCTACATGTGAATCATCTGGTCCTTGGGATATACAGTTACACTaGGCCTGTTTCAAGGGTAGG +
Preference number: 2 (lower is better)
Translates to: KIPVGFWLFPTCESSGPWDIQLH*ACFKGR
Trigger: CCTACCCTTGAAACAGGCTCAGTGTAACTGTATATC...CCAAGGACCAGATGATTCACATGTAGGAAACAGCCAGAAGCCAACTGGAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
3UTR-3UTR TCA 90 bp GCATCTAGTTTAACTTCCATTTGGAGGGCACAAAGCATATTGTGGGAGGTTCATCCTCAGGAGTTAAGCTaGACTAAATCCCCAAGGCTT +
Preference number: 2 (lower is better)
Translates to: ASSLTSIWRAQSILWEVHPQELS*TKSPRL
Trigger: AAGCCTTGGGGATTTAGTTCAGCTTAACTCCTGAGG...ATGAACCTCCCACAATATGCTTTGTGCCCTCCAAATGGAAGTTAAACTAGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR-3UTR TCA 90 bp AAAATTCCAGTTGGCTTCTGGCTGTTTCCTACATGTGAATCATCTGGTCCTTGGAGGTTTGACATACCATaGGCAATGAAGATGAGCGAT +
Preference number: 2 (lower is better)
Translates to: KIPVGFWLFPTCESSGPWRFDIP*AMKMSD
Trigger: ATCGCTCATCTTCATTGCTCATGGTATGTCAAACCT...CCAAGGACCAGATGATTCACATGTAGGAAACAGCCAGAAGCCAACTGGAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
3UTR-3UTR TCA 90 bp CTTCCAGATCCTTTACTCCCTCCCTTCTTTGAAGAGCCTGCTCTAATGTCAACTTCTCAGACTTTCTCTTaGAAAGACTCTCTCCCTATT +
Preference number: 2 (lower is better)
Translates to: LPDPLLPPFFEEPALMSTSQTFS*KDSLPI
Trigger: AATAGGGAGAGAGTCTTTTCAAGAGAAAGTCTGAGA...AGTTGACATTAGAGCAGGCTCTTCAAAGAAGGGAGGGAGTAAAGGATCTGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR-3UTR GCA 90 bp CTCACCAAGCCTTCAAAGCTTCTTCCTTCCCTACAGAGAGCATCCTATACCTTCATGTCAATGCTGAGATaGCTGGAATTCATCTTCATA +
Preference number: 2 (lower is better)
Translates to: LTKPSKLLPSLQRASYTFMSMLR*LEFIFI
Trigger: TATGAAGATGAATTCCAGGCATCTCAGCATTGACAT...GAAGGTATAGGATGCTCTCTGTAGGGAAGGAAGAAGCTTTGAAGGCTTGGTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
3UTR-3UTR GCA 90 bp TATTCACTCCCTTGTTTAATGTCTGCTCCAGTGGGGGCAGGACTTTATTGCTATCTGGCAAAAAGCATATaGTCCAAAGGTTTGTGTGGA +
Preference number: 2 (lower is better)
Translates to: YSLPCLMSAPVGAGLYCYLAKSI*SKGLCG
Trigger: TCCACACAAACCTTTGGAGCATATGCTTTTTGCCAG...ATAGCAATAAAGTCCTGCCCCCACTGGAGCAGACATTAAACAAGGGAGTGAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR-3UTR CCA 90 bp CTTCCAGATCCTTTACTCCCTCCCTTCTTTGAAGAGCCTGCTCTAATGTCAACTTGGGTGCACATATGTTaGGTGAGACTTCTGTTTAAA +
Preference number: 2 (lower is better)
Translates to: LPDPLLPPFFEEPALMSTWVHIC*VRLLFK
Trigger: TTTAAACAGAAGTCTCACCCAACATATGTGCACCCA...AGTTGACATTAGAGCAGGCTCTTCAAAGAAGGGAGGGAGTAAAGGATCTGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR CAA 90 bp TTCAACGTTTCAATACCCTTTTCTGGAGTGACCTGGATAGGGACTTaGAAATACTGCAACTGTAAAAGTGTGAGCTCTGCTCTTATCCCA +
Preference number: 2 (lower is better)
Translates to: FNVSIPFSGVTWIGT*KYCNCKSVSSALIP
Trigger: TGGGATAAGAGCAGAGCTCACACTTTTACAGTTGCAGTATTTCAAAGTCCCTATCCAGGTCACTCCAGAAAAGGGTATTGAAACGTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
3UTR-3UTR TCA 90 bp AATGTCTGCTCCAGTGGGGGCAGGACTTTATTGCTATTGTTCACCTCTGTATCAAAAGAGGTCTATGTGTaGGTTAAAATAACAGCAGAG +
Preference number: 2 (lower is better)
Translates to: NVCSSGGRTLLLLFTSVSKEVYV*VKITAE
Trigger: CTCTGCTGTTATTTTAACTCACACATAGACCTCTTT...TGATACAGAGGTGAACAATAGCAATAAAGTCCTGCCCCCACTGGAGCAGACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR-3UTR GCA 90 bp GCATCTAGTTTAACTTCCATTTGGAGGGCACAAAGCATATTGTGGGAGGTTCATAGGACGACATTTTGGTaGAAGTCCTCAATCCTGTAT +
Preference number: 2 (lower is better)
Translates to: ASSLTSIWRAQSILWEVHRTTFW*KSSILY
Trigger: ATACAGGATTGAGGACTTGCACCAAAATGTCGTCCT...ATGAACCTCCCACAATATGCTTTGTGCCCTCCAAATGGAAGTTAAACTAGATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR-3UTR TCA 90 bp GCACGTCAAACTATGCACATACTAGAGTTTCAGACTTCATTCAACATTGGCATCCCATGCCATTTCTACTaGCTTCATTTCAGGAACCAT +
Preference number: 2 (lower is better)
Translates to: ARQTMHILEFQTSFNIGIPCHFY*LHFRNH
Trigger: ATGGTTCCTGAAATGAAGTCAGTAGAAATGGCATGG...GATGCCAATGTTGAATGAAGTCTGAAACTCTAGTATGTGCATAGTTTGACGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
3UTR-3UTR TCA 90 bp ATTCCAATTAGAGATCTTAAAGATAGGTCTCCAGAGGTTTTACTTCTTACCGAAGTTTGGGGTTTGGGGTaGGATACGAGAGGATTTAGG +
Preference number: 2 (lower is better)
Translates to: IPIRDLKDRSPEVLLLTEVWGLG*DTRGFR
Trigger: CCTAAATCCTCTCGTATCTCACCCCAAACCCCAAAC...TTCGGTAAGAAGTAAAACCTCTGGAGACCTATCTTTAAGATCTCTAATTGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
3UTR-3UTR GCA 90 bp CTATGGACATTACCATGTTGTCATGGTAATTATGAGCTTTGTACCTCTCAAAATGCCTGGTGTGCATGCTaGACGTCAAACTATGCACAT +
Preference number: 2 (lower is better)
Translates to: LWTLPCCHGNYELCTSQNAWCAC*TSNYAH
Trigger: ATGTGCATAGTTTGACGTGCAGCATGCACACCAGGC...ATTTTGAGAGGTACAAAGCTCATAATTACCATGACAACATGGTAATGTCCATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
3UTR-3UTR GCA 90 bp ACCCAGGAACATGTCAATGCTGAGATGCCTGGAATTCATCTTCATAAGTCCTCTCATCTCTGGGATTCTTaGCTTTATTTGTGGTTGAAA +
Preference number: 2 (lower is better)
Translates to: TQEHVNAEMPGIHLHKSSHLWDS*LYLWLK
Trigger: TTTCAACCACAAATAAAGGCAAGAATCCCAGAGATG...AGAGGACTTATGAAGATGAATTCCAGGCATCTCAGCATTGACATGTTCCTGGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
3UTR-3UTR TCA 90 bp GAATTACGTTTAATGAGCTACCTGGTAGATAGCCTAGAAAACTTGTCCAAAGCAACATGCGACTACTCATaGTTTACTGCAACGGTTATC +
Preference number: 2 (lower is better)
Translates to: ELRLMSYLVDSLENLSKATCDYS*FTATVI
Trigger: GATAACCGTTGCAGTAAATCATGAGTAGTCGCATGT...TGCTTTGGACAAGTTTTCTAGGCTATCTACCAGGTAGCTCATTAAACGTAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
3UTR-3UTR TCA 90 bp ATTCCAATTAGAGATCTTAAAGATAGGTCTCCAGAGGTTTTACTTCTTACCGAATGGTTACTTGCCTACTaGTGTCCACACATGCGACTA +
Preference number: 2 (lower is better)
Translates to: IPIRDLKDRSPEVLLLTEWLLAY*CPHMRL
Trigger: TAGTCGCATGTGTGGACATCAGTAGGCAAGTAACCA...TTCGGTAAGAAGTAAAACCTCTGGAGACCTATCTTTAAGATCTCTAATTGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
3UTR-3UTR TCA 90 bp ATAGGGCTGCTATACAAACCTACCTTGGTCAGTACAACATATAAAGCCTCTAAACAAACCCCAAAGGTTTaGCATACCATGAGCAATGAA +
Preference number: 2 (lower is better)
Translates to: IGLLYKPTLVSTTYKASKQTPKV*HTMSNE
Trigger: TTCATTGCTCATGGTATGTCAAACCTTTGGGGTTTG...TTTAGAGGCTTTATATGTTGTACTGACCAAGGTAGGTTTGTATAGCAGCCCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
3UTR-3UTR TCA 90 bp AGAGGACGACATTTTGGTGCAAGTCCTCAATCCTGTATTCCTGAAACTCTGTTAAAACAAACTTTGTCTTaGGCTGAGATTGCATATGTG +
Preference number: 2 (lower is better)
Translates to: RGRHFGASPQSCIPETLLKQTLS*AEIAYV
Trigger: CACATATGCAATCTCAGCTCAAGACAAAGTTTGTTT...TAACAGAGTTTCAGGAATACAGGATTGAGGACTTGCACCAAAATGTCGTCCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR-3UTR GCA 90 bp GCATCTAGTTTAACTTCCATTTGGAGGGCACAAAGCATATTGTGGGAGGTTCATATGACAAGTATAGCATaGAATGGCATAAAGAGGTCT +
Preference number: 2 (lower is better)
Translates to: ASSLTSIWRAQSILWEVHMTSIA*NGIKRS
Trigger: AGACCTCTTTATGCCATTGCATGCTATACTTGTCAT...ATGAACCTCCCACAATATGCTTTGTGCCCTCCAAATGGAAGTTAAACTAGATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR-3UTR CCA 90 bp TATTCACTCCCTTGTTTAATGTCTGCTCCAGTGGGGGCAGGACTTTATTGCTATTGCATATGTGTTTTATaGCTGAGTAGGACATTTTCT +
Preference number: 2 (lower is better)
Translates to: YSLPCLMSAPVGAGLYCYCICVL*LSRTFS
Trigger: AGAAAATGTCCTACTCAGCCATAAAACACATATGCA...ATAGCAATAAAGTCCTGCCCCCACTGGAGCAGACATTAAACAAGGGAGTGAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR CAA 90 bp ATCACTATCTTAAATAATGGTGCACAATTATCGTTATTCACTCCCTaGTTTAATGTCTGCTCCAGTGGGGGCAGGACTTTATTGCTATTG +
Preference number: 2 (lower is better)
Translates to: ITILNNGAQLSLFTP*FNVCSSGGRTLLLL
Trigger: CAATAGCAATAAAGTCCTGCCCCCACTGGAGCAGACATTAAACAAGGGAGTGAATAACGATAATTGTGCACCATTATTTAAGATAGTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR-3UTR TCA 90 bp CACTATCTCATATCTGAAGAATTACGTTTAATGAGCTACCTGGTAGATAGCCTAAAGGTTAGCAGTTTCTaGGTCAAACCCCAAAGGTTT +
Preference number: 2 (lower is better)
Translates to: HYLISEELRLMSYLVDSLKVSSF*VKPQRF
Trigger: AAACCTTTGGGGTTTGACTCAGAAACTGCTAACCTT...TAGGCTATCTACCAGGTAGCTCATTAAACGTAATTCTTCAGATATGAGATAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
3UTR-3UTR TCA 90 bp ATTCCAATTAGAGATCTTAAAGATAGGTCTCCAGAGGTTTTACTTCTTACCGAAGCAACTGTAAAAGTGTaGGCTCTGCTCTTATCCCAT +
Preference number: 2 (lower is better)
Translates to: IPIRDLKDRSPEVLLLTEATVKV*ALLLSH
Trigger: ATGGGATAAGAGCAGAGCTCACACTTTTACAGTTGC...TTCGGTAAGAAGTAAAACCTCTGGAGACCTATCTTTAAGATCTCTAATTGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
3UTR-3UTR GCA 90 bp GGAGTAGGTAGTAGCATTAATGGTAGACAACAGAATTACTGTCATCCTAAACAGGTAAAACTGGTTACTTaGCTACTGATGTCCACACAT +
Preference number: 2 (lower is better)
Translates to: GVGSSINGRQQNYCHPKQVKLVT*LLMSTH
Trigger: ATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTAC...CTGTTTAGGATGACAGTAATTCTGTTGTCTACCATTAATGCTACTACCTACTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
3UTR-3UTR GCA 90 bp GCACGTCAAACTATGCACATACTAGAGTTTCAGACTTCATTCAACATTGGCATCTACTTTATGAGTATCTaGTCTGGGTGTAAACTACAC +
Preference number: 2 (lower is better)
Translates to: ARQTMHILEFQTSFNIGIYFMSI*SGCKLH
Trigger: GTGTAGTTTACACCCAGAGCAGATACTCATAAAGTA...GATGCCAATGTTGAATGAAGTCTGAAACTCTAGTATGTGCATAGTTTGACGTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
3UTR-3UTR GCA 90 bp CTATGGACATTACCATGTTGTCATGGTAATTATGAGCTTTGTACCTCTCAAAATAGACAATTGGGGCAGTaGAACTGTGGGACTATAATC +
Preference number: 2 (lower is better)
Translates to: LWTLPCCHGNYELCTSQNRQLGQ*NCGTII
Trigger: GATTATAGTCCCACAGTTGCACTGCCCCAATTGTCT...ATTTTGAGAGGTACAAAGCTCATAATTACCATGACAACATGGTAATGTCCATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
3UTR-3UTR CCA 90 bp TTCAGACTTCATTCAACATTGGCATCTCCTTTTAGCAGAATACAAACCCTTTGGTTTTCTGGAGTGACCTaGATAGGGACTTTGAAATAC +
Preference number: 2 (lower is better)
Translates to: FRLHSTLASPFSRIQTLWFSGVT*IGTLKY
Trigger: GTATTTCAAAGTCCCTATCCAGGTCACTCCAGAAAA...CCAAAGGGTTTGTATTCTGCTAAAAGGAGATGCCAATGTTGAATGAAGTCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
3UTR-3UTR CCA 90 bp CTATGGACATTACCATGTTGTCATGGTAATTATGAGCTTTGTACCTCTCAAAATTTCAATACCCTTTTCTaGAGTGACCTGGATAGGGAC +
Preference number: 2 (lower is better)
Translates to: LWTLPCCHGNYELCTSQNFNTLF*SDLDRD
Trigger: GTCCCTATCCAGGTCACTCCAGAAAAGGGTATTGAA...ATTTTGAGAGGTACAAAGCTCATAATTACCATGACAACATGGTAATGTCCATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
3UTR CAA 90 bp ACACATGCGACTACTCATGATTTACTGCAACGGTTATCAAATATGTaGCTTTCGCATAATTCATTAGTGATTAATTGCCATGCCAGACAC +
Preference number: 2 (lower is better)
Translates to: THATTHDLLQRLSNM*LSHNSLVINCHARH
Trigger: GTGTCTGGCATGGCAATTAATCACTAATGAATTATGCGAAAGCAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCGCATGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
3UTR-3UTR TCA 90 bp ATAGGCAATTATGGAGTAGGTAGTAGCATTAATGGTAGACAACAGAATTACTGTACATGCGACTACTCATaGTTTACTGCAACGGTTATC +
Preference number: 2 (lower is better)
Translates to: IGNYGVGSSINGRQQNYCTCDYS*FTATVI
Trigger: GATAACCGTTGCAGTAAATCATGAGTAGTCGCATGT...ACAGTAATTCTGTTGTCTACCATTAATGCTACTACCTACTCCATAATTGCCTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
3UTR-3UTR GCA 90 bp CACTATCTCATATCTGAAGAATTACGTTTAATGAGCTACCTGGTAGATAGCCTAGTAAAACTGGTTACTTaGCTACTGATGTCCACACAT +
Preference number: 2 (lower is better)
Translates to: HYLISEELRLMSYLVDSLVKLVT*LLMSTH
Trigger: ATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTAC...TAGGCTATCTACCAGGTAGCTCATTAAACGTAATTCTTCAGATATGAGATAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
3UTR-3UTR CCA 90 bp GGAGTAGGTAGTAGCATTAATGGTAGACAACAGAATTACTGTCATCCTAAACAGGAAAAGAAATATGTATaGCTTAGGTCTAAGCCCACT +
Preference number: 2 (lower is better)
Translates to: GVGSSINGRQQNYCHPKQEKKYV*LRSKPT
Trigger: AGTGGGCTTAGACCTAAGCCATACATATTTCTTTTC...CTGTTTAGGATGACAGTAATTCTGTTGTCTACCATTAATGCTACTACCTACTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
3UTR-3UTR GCA 90 bp GAAAAGAAATATGTATGGCTTAGGTCTAAGCCCACTATCTCATATCTGAAGAATGTAAAACTGGTTACTTaGCTACTGATGTCCACACAT +
Preference number: 2 (lower is better)
Translates to: EKKYVWLRSKPTISYLKNVKLVT*LLMSTH
Trigger: ATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTAC...ATTCTTCAGATATGAGATAGTGGGCTTAGACCTAAGCCATACATATTTCTTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
3UTR-3UTR CCA 90 bp CAAAACACAAAACCACATTTAGCACAAAGCCAAACCCTGAAGTATATAATCCGTGAAAAGAAATATGTATaGCTTAGGTCTAAGCCCACT +
Preference number: 2 (lower is better)
Translates to: QNTKPHLAQSQTLKYIIREKKYV*LRSKPT
Trigger: AGTGGGCTTAGACCTAAGCCATACATATTTCTTTTC...ACGGATTATATACTTCAGGGTTTGGCTTTGTGCTAAATGTGGTTTTGTGTTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
3UTR-3UTR CCA 90 bp CAAAACACAAAACCACATTTAGCACAAAGCCAAACCCTGAAGTATATAATCCGTCAATGGCACTCAACATaGCAAGTTCTCTGTTTAATA +
Preference number: 2 (lower is better)
Translates to: QNTKPHLAQSQTLKYIIRQWHST*QVLCLI
Trigger: TATTAAACAGAGAACTTGCCATGTTGAGTGCCATTG...ACGGATTATATACTTCAGGGTTTGGCTTTGTGCTAAATGTGGTTTTGTGTTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
3UTR-3UTR TCA 90 bp CTATGGACATTACCATGTTGTCATGGTAATTATGAGCTTTGTACCTCTCAAAATAGCAAGTGCCAAAGATaGCAAATGCCATTGTTTATT +
Preference number: 2 (lower is better)
Translates to: LWTLPCCHGNYELCTSQNSKCQR*QMPLFI
Trigger: AATAAACAATGGCATTTGTCATCTTTGGCACTTGCT...ATTTTGAGAGGTACAAAGCTCATAATTACCATGACAACATGGTAATGTCCATAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
3UTR-3UTR GCA 90 bp CTATACAAACCTACCTTGGTCAGTACAACATATAAAGCCTCTAAAAGGTTAGCAAAGATGAGCGATGAATaGATTAGTAAAACTGGTTAC +
Preference number: 2 (lower is better)
Translates to: LYKPTLVSTTYKASKRLAKMSDE*ISKTGY
Trigger: GTAACCAGTTTTACTAATGCATTCATCGCTCATCTT...TGCTAACCTTTTAGAGGCTTTATATGTTGTACTGACCAAGGTAGGTTTGTATAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
3UTR-3UTR CCA 90 bp ATAGGCAATTATGGAGTAGGTAGTAGCATTAATGGTAGACAACAGAATTACTGTGAAAAGAAATATGTATaGCTTAGGTCTAAGCCCACT +
Preference number: 2 (lower is better)
Translates to: IGNYGVGSSINGRQQNYCEKKYV*LRSKPT
Trigger: AGTGGGCTTAGACCTAAGCCATACATATTTCTTTTC...ACAGTAATTCTGTTGTCTACCATTAATGCTACTACCTACTCCATAATTGCCTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
3UTR CCA 72 bp CCACCTTTGTCTTCCCTCACAGTGTTCCAGACACACTaGCCTTGCTGCTCCTCTAAGACACTGAGCTTGGTT +
Preference number: 3 (lower is better)
Translates to: PPLSSLTVFQTH*PCCSSKTLSLV
Trigger: AACCAAGCTCAGTGTCTTAGAGGAGCAGCAAGGCCAGTGTGTCTGGAACACTGTGAGGGAAGACAAAGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR-3UTR CAA 90 bp CTCACCAAGCCTTCAAAGCTTCTTCCTTCCCTACAGAGAGCATCCTATACCTTCTGGGATGAGGTTGGCTaGGACAACTCCAGGCATCTC +
Preference number: 3 (lower is better)
Translates to: LTKPSKLLPSLQRASYTFWDEVG*DNSRHL
Trigger: GAGATGCCTGGAGTTGTCCAAGCCAACCTCATCCCA...GAAGGTATAGGATGCTCTCTGTAGGGAAGGAAGAAGCTTTGAAGGCTTGGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
3UTR-3UTR CAA 90 bp ATACCTTCCAATGGGCTTATTTTCAGGACTCACAGAGCCAGACTAATGCCACACCTCTGTGGGATGAGGTaGGCTTGGACAACTCCAGGC +
Preference number: 3 (lower is better)
Translates to: IPSNGLIFRTHRARLMPHLCGMR*AWTTPG
Trigger: GCCTGGAGTTGTCCAAGCCAACCTCATCCCACAGAG...GTGTGGCATTAGTCTGGCTCTGTGAGTCCTGAAAATAAGCCCATTGGAAGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367733.6
3UTR CCA 72 bp TACAGGAGGAAGCAGCAAGTGGAGAGGTCCACTCAGTaGCAGAGTCTGTTTAACGGTGGGTGCACATATGTT +
Preference number: 3 (lower is better)
Translates to: YRRKQQVERSTQ*QSLFNGGCTYV
Trigger: AACATATGTGCACCCACCGTTAAACAGACTCTGCCACTGAGTGGACCTCTCCACTTGCTGCTTCCTCCTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR CCA 72 bp AAAAGGCTCGCCCCATCCTTCAAGGCCTACATCACCTaGTCCCTGACCTCTTTCCTTGTTAACCAACTACCA +
Preference number: 3 (lower is better)
Translates to: KRLAPSFKAYIT*SLTSFLVNQLP
Trigger: TGGTAGTTGGTTAACAAGGAAAGAGGTCAGGGACCAGGTGATGTAGGCCTTGAAGGATGGGGCGAGCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR-3UTR CAA 90 bp AGGCTCGCCCCATCCTTCAAGGCCTACATCACCTGGTCCCTGACCTCTTTCCTTAGGACTTTATTGCTATaGTTCACCTCTGTATCACCA +
Preference number: 3 (lower is better)
Translates to: RLAPSFKAYITWSLTSFLRTLLL*FTSVSP
Trigger: TGGTGATACAGAGGTGAACAATAGCAATAAAGTCCT...AAGGAAAGAGGTCAGGGACCAGGTGATGTAGGCCTTGAAGGATGGGGCGAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR TCA 72 bp ATGCCTGGAATTCATCTTCATAAGTCCTCTGTGGGATaGGGTTGGCTTGGACAACTCCAGGCATCTCTGGGA +
Preference number: 3 (lower is better)
Translates to: MPGIHLHKSSVG*GWLGQLQASLG
Trigger: TCCCAGAGATGCCTGGAGTTGTCCAAGCCAACCTCATCCCACAGAGGACTTATGAAGATGAATTCCAGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
3UTR-3UTR CAA 90 bp AACCAACTACCACCTTTGTCTTCCCTCACAGTGTTCCAGACACACTGGCCTTGCCCTTCCCTCATCACCTaGACAAAAATAAAGCTTGCC +
Preference number: 3 (lower is better)
Translates to: NQLPPLSSLTVFQTHWPCPSLIT*TKIKLA
Trigger: GGCAAGCTTTATTTTTGTCAAGGTGATGAGGGAAGG...GCAAGGCCAGTGTGTCTGGAACACTGTGAGGGAAGACAAAGGTGGTAGTTGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR GCA 72 bp GAGGCCTTCCCTCATCACCTTGACAAAAATAAAGCTTaGCTGCCCCTTACTCTCACTGTCTGTCCCTTTAAC +
Preference number: 3 (lower is better)
Translates to: EAFPHHLDKNKA*LPLTLTVCPFN
Trigger: GTTAAAGGGACAGACAGTGAGAGTAAGGGGCAGGCAAGCTTTATTTTTGTCAAGGTGATGAGGGAAGGCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR CCA 72 bp ACCTGCCCAAGACCTCACAGCTTGGAAGTAAGCACCTaGAATGTAAATATAAGTGGTGTGACACAACAGCCC +
Preference number: 3 (lower is better)
Translates to: TCPRPHSLEVST*NVNISGVTQQP
Trigger: GGGCTGTTGTGTCACACCACTTATATTTACATTCCAGGTGCTTACTTCCAAGCTGTGAGGTCTTGGGCAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR GCA 72 bp TGTCATGGGACACCCCTACTCAGTGAATACTTGCTCTaGTGTCTGGGAACAGTTAGCACACAAAATTCCAGT +
Preference number: 3 (lower is better)
Translates to: CHGTPLLSEYLL*CLGTVSTQNSS
Trigger: ACTGGAATTTTGTGTGCTAACTGTTCCCAGACAGCAGAGCAAGTATTCACTGAGTAGGGGTGTCCCATGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
3UTR GCA 72 bp CTGCTGCTAACACCCAGGAACATGTCAATGCTGAGATaGCTGGAATTCATCTTCATAAGTCCTCTGTGGGAT +
Preference number: 3 (lower is better)
Translates to: LLLTPRNMSMLR*LEFIFISPLWD
Trigger: ATCCCACAGAGGACTTATGAAGATGAATTCCAGGCATCTCAGCATTGACATGTTCCTGGGTGTTAGCAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
3UTR GCA 72 bp TGTTTAATGTCTGCTCCAGTGGGGGCAGGACTTTATTaGTATTGTTCACCTCTGTATCACCAGGGCCTAGAA +
Preference number: 3 (lower is better)
Translates to: CLMSAPVGAGLY*YCSPLYHQGLE
Trigger: TTCTAGGCCCTGGTGATACAGAGGTGAACAATAGCAATAAAGTCCTGCCCCCACTGGAGCAGACATTAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR CCA 72 bp TGCTATTGTTCACCTCTGTATCACCAGGGCCTAGAATaGCAGCTGGCAAAAAGCATATGCTCCAAAGGTTTG +
Preference number: 3 (lower is better)
Translates to: CYCSPLYHQGLE*QLAKSICSKGL
Trigger: CAAACCTTTGGAGCATATGCTTTTTGCCAGCTGCCATTCTAGGCCCTGGTGATACAGAGGTGAACAATAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR-3UTR CAA 90 bp ACCAAGCCTTCAAAGCTTCTTCCTTCCCTACAGAGAGCATCCTATACCTTCCAAGTTCAAATTTCTGCTTaGCCACCAACTAGCTGTGTG +
Preference number: 3 (lower is better)
Translates to: TKPSKLLPSLQRASYTFQVQISA*PPTSCV
Trigger: CACACAGCTAGTTGGTGGCAAAGCAGAAATTTGAAC...TTGGAAGGTATAGGATGCTCTCTGTAGGGAAGGAAGAAGCTTTGAAGGCTTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
3UTR TCA 72 bp CTTCAGACTTCCAGATCCTTTACTCCCTCCCTTCTTTaGAGAGCCTGCTCTAATGTCAACTCTTCAAAGAGG +
Preference number: 3 (lower is better)
Translates to: LQTSRSFTPSLL*RACSNVNSSKR
Trigger: CCTCTTTGAAGAGTTGACATTAGAGCAGGCTCTTCAAAGAAGGGAGGGAGTAAAGGATCTGGAAGTCTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR GCA 72 bp AAGCTACATTCCCATCTTAAGGCCTGGTGTGCATGCTaGACGTCAAACTATGCACATACTAGAGTTTCAGAC +
Preference number: 3 (lower is better)
Translates to: KLHSHLKAWCAC*TSNYAHTRVSD
Trigger: GTCTGAAACTCTAGTATGTGCATAGTTTGACGTGCAGCATGCACACCAGGCCTTAAGATGGGAATGTAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
3UTR TCA 72 bp CAAAATTCCAGTTGGCTTCTGGCTGTTTCCTACATGTaGATCATCTGGTCCTTGGTAGTCCAAAACTTAGCC +
Preference number: 3 (lower is better)
Translates to: QNSSWLLAVSYM*IIWSLVVQNLA
Trigger: GGCTAAGTTTTGGACTACCAAGGACCAGATGATTCACATGTAGGAAACAGCCAGAAGCCAACTGGAATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
3UTR-3UTR CAA 90 bp AAAATTCCAGTTGGCTTCTGGCTGTTTCCTACATGTGAATCATCTGGTCCTTGGAGTAAAACTGGTTACTaGCCTACTGATGTCCACACA +
Preference number: 3 (lower is better)
Translates to: KIPVGFWLFPTCESSGPWSKTGY*PTDVHT
Trigger: TGTGTGGACATCAGTAGGCAAGTAACCAGTTTTACT...CCAAGGACCAGATGATTCACATGTAGGAAACAGCCAGAAGCCAACTGGAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
3UTR-3UTR CAA 90 bp GCACGTCAAACTATGCACATACTAGAGTTTCAGACTTCATTCAACATTGGCATCGTGCAGACTTTTCCTTaGCAAACTACCTCGTGCTTC +
Preference number: 3 (lower is better)
Translates to: ARQTMHILEFQTSFNIGIVQTFP*QTTSCF
Trigger: GAAGCACGAGGTAGTTTGCAAAGGAAAAGTCTGCAC...GATGCCAATGTTGAATGAAGTCTGAAACTCTAGTATGTGCATAGTTTGACGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
3UTR-3UTR CAA 90 bp GGAAGCTACAAGGGCAGTGATTTTGTAAAGAATTATCCTGAGTCTGGAGGAGAGGCATCTCTGGGATTCTaGCCTTTATTTGTGGTTGAA +
Preference number: 3 (lower is better)
Translates to: GSYKGSDFVKNYPESGGEASLGF*PLFVVE
Trigger: TTCAACCACAAATAAAGGCAAGAATCCCAGAGATGC...CTCTCCTCCAGACTCAGGATAATTCTTTACAAAATCACTGCCCTTGTAGCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367733.6
3UTR-3UTR CAA 90 bp GTCAACTCTTCAAAGAGGCCTTCCCTCATCACCTTGACAAAAATAAAGCTTGCCTCGTTATTCACTCCCTaGTTTAATGTCTGCTCCAGT +
Preference number: 3 (lower is better)
Translates to: VNSSKRPSLITLTKIKLASLFTP*FNVCSS
Trigger: ACTGGAGCAGACATTAAACAAGGGAGTGAATAACGA...GGCAAGCTTTATTTTTGTCAAGGTGATGAGGGAAGGCCTCTTTGAAGAGTTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR GCA 72 bp ATTAAGCTACATTCCCATCTTAAGGCCTGGTGTGCATaGTGCACGTCAAACTATGCACATACTAGAGTTTCA +
Preference number: 3 (lower is better)
Translates to: IKLHSHLKAWCA*CTSNYAHTRVS
Trigger: TGAAACTCTAGTATGTGCATAGTTTGACGTGCAGCATGCACACCAGGCCTTAAGATGGGAATGTAGCTTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
3UTR GCA 72 bp GCACAATTATCGTTATTCACTCCCTTGTTTAATGTCTaGTCCAGTGGGGGCAGGACTTTATTGCTATTGTTC +
Preference number: 3 (lower is better)
Translates to: AQLSLFTPLFNV*SSGGRTLLLLF
Trigger: GAACAATAGCAATAAAGTCCTGCCCCCACTGGAGCAGACATTAAACAAGGGAGTGAATAACGATAATTGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR-3UTR CAA 90 bp GCATCTAGTTTAACTTCCATTTGGAGGGCACAAAGCATATTGTGGGAGGTTCATGACTCTCTCCCTATTTaGAACCTAAAAAGGACCCAA +
Preference number: 3 (lower is better)
Translates to: ASSLTSIWRAQSILWEVHDSLPI*NLKRTQ
Trigger: TTGGGTCCTTTTTAGGTTCAAAATAGGGAGAGAGTC...ATGAACCTCCCACAATATGCTTTGTGCCCTCCAAATGGAAGTTAAACTAGATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR-3UTR CAA 90 bp GCACGTCAAACTATGCACATACTAGAGTTTCAGACTTCATTCAACATTGGCATCAGTAAAACTGGTTACTaGCCTACTGATGTCCACACA +
Preference number: 3 (lower is better)
Translates to: ARQTMHILEFQTSFNIGISKTGY*PTDVHT
Trigger: TGTGTGGACATCAGTAGGCAAGTAACCAGTTTTACT...GATGCCAATGTTGAATGAAGTCTGAAACTCTAGTATGTGCATAGTTTGACGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
3UTR-3UTR CAA 90 bp GCATCTAGTTTAACTTCCATTTGGAGGGCACAAAGCATATTGTGGGAGGTTCATATCTCAGACTTTCTCTaGAAAAGACTCTCTCCCTAT +
Preference number: 3 (lower is better)
Translates to: ASSLTSIWRAQSILWEVHISDFL*KRLSPY
Trigger: ATAGGGAGAGAGTCTTTTCAAGAGAAAGTCTGAGAT...ATGAACCTCCCACAATATGCTTTGTGCCCTCCAAATGGAAGTTAAACTAGATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR-3UTR CAA 90 bp CTATGGACATTACCATGTTGTCATGGTAATTATGAGCTTTGTACCTCTCAAAATGTGCAGACTTTTCCTTaGCAAACTACCTCGTGCTTC +
Preference number: 3 (lower is better)
Translates to: LWTLPCCHGNYELCTSQNVQTFP*QTTSCF
Trigger: GAAGCACGAGGTAGTTTGCAAAGGAAAAGTCTGCAC...ATTTTGAGAGGTACAAAGCTCATAATTACCATGACAACATGGTAATGTCCATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
3UTR-3UTR CAA 90 bp GCACGTCAAACTATGCACATACTAGAGTTTCAGACTTCATTCAACATTGGCATCACCTGGATAGGGACTTaGAAATACTGCAACTGTAAA +
Preference number: 3 (lower is better)
Translates to: ARQTMHILEFQTSFNIGITWIGT*KYCNCK
Trigger: TTTACAGTTGCAGTATTTCAAAGTCCCTATCCAGGT...GATGCCAATGTTGAATGAAGTCTGAAACTCTAGTATGTGCATAGTTTGACGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
3UTR TCA 72 bp TACTTGCCTACTGATGTCCACACATGCGACTACTCATaGTTTACTGCAACGGTTATCAAATATGTTGCTTTC +
Preference number: 3 (lower is better)
Translates to: YLPTDVHTCDYS*FTATVIKYVAF
Trigger: GAAAGCAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCGCATGTGTGGACATCAGTAGGCAAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
3UTR TCA 72 bp AAGTATAGCATGCAATGGCATAAAGAGGTCTATGTGTaGGTTAAAATAACAGCAGAGAGGACGACATTTTGG +
Preference number: 3 (lower is better)
Translates to: KYSMQWHKEVYV*VKITAERTTFW
Trigger: CCAAAATGTCGTCCTCTCTGCTGTTATTTTAACTCACACATAGACCTCTTTATGCCATTGCATGCTATACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR GCA 72 bp CAAACAGTGCAGACTTTTCCTTTGCAAACTACCTCGTaGTTCTGGAAAAGTTTATTCTTAAGGAGTCCTAAT +
Preference number: 3 (lower is better)
Translates to: QTVQTFPLQTTS*FWKSLFLRSPN
Trigger: ATTAGGACTCCTTAAGAATAAACTTTTCCAGAAGCACGAGGTAGTTTGCAAAGGAAAAGTCTGCACTGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
3UTR GCA 72 bp GAAAATATAGTGCTTACTTGTACCTGCCCTGTTCAATaGTTTCCCTGCATTATCTCATTCAATCCTATCAAC +
Preference number: 3 (lower is better)
Translates to: ENIVLTCTCPVQ*FPCIISFNPIN
Trigger: GTTGATAGGATTGAATGAGATAATGCAGGGAAAGCATTGAACAGGGCAGGTACAAGTAAGCACTATATTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR-3UTR CAA 90 bp CAAAACACAAAACCACATTTAGCACAAAGCCAAACCCTGAAGTATATAATCCGTAGGGAGACATTTCAGTaGGTGAAACCTGATTTACTT +
Preference number: 3 (lower is better)
Translates to: QNTKPHLAQSQTLKYIIRRETFQ*VKPDLL
Trigger: AAGTAAATCAGGTTTCACCAACTGAAATGTCTCCCT...ACGGATTATATACTTCAGGGTTTGGCTTTGTGCTAAATGTGGTTTTGTGTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
3UTR CCA 72 bp ATTTGCTTTAGATTTCAACGTTTCAATACCCTTTTCTaGAGTGACCTGGATAGGGACTTTGAAATACTGCAA +
Preference number: 3 (lower is better)
Translates to: ICFRFQRFNTLF*SDLDRDFEILQ
Trigger: TTGCAGTATTTCAAAGTCCCTATCCAGGTCACTCCAGAAAAGGGTATTGAAACGTTGAAATCTAAAGCAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp AGGCTCGCCCCATCCTTCAAGGCCTACATCACCTGGTCCCTGACCTCTTTCCTTGGGCCGGCGACCAGCTaGTCCCTGCTCGCCTCTACG +
Preference number: 4 (lower is better)
Translates to: RLAPSFKAYITWSLTSFLGPATS*SLLAST
Trigger: CGTAGAGGCGAGCAGGGACCAGCTGGTCGCCGGCCC...AAGGAAAGAGGTCAGGGACCAGGTGATGTAGGCCTTGAAGGATGGGGCGAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR GCA 90 bp AATCTAGATATACAGGAGGAAGCAGCAAGTGGAGAGGTCCACTCAGTGGCAGAGCGCTGCCCTGGCTGCTaGTGCTGCGCCGGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: NLDIQEEAASGEVHSVAERCPGC*CCAGLS
Trigger: GCTGAGCCCGGCGCAGCAGCAGCAGCCAGGGCAGCG...CTCTGCCACTGAGTGGACCTCTCCACTTGCTGCTTCCTCCTGTATATCTAGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR CCA 90 bp GTGGTTGAAAGCATAGGCTCTGGAGCTCAACAGCCTGGGTTCAAATTTCTGCTTGGGCCGGCGACCAGCTaGTCCCTGCTCGCCTCTACG +
Preference number: 4 (lower is better)
Translates to: VVESIGSGAQQPGFKFLLGPATS*SLLAST
Trigger: CGTAGAGGCGAGCAGGGACCAGCTGGTCGCCGGCCC...AAGCAGAAATTTGAACCCAGGCTGTTGAGCTCCAGAGCCTATGCTTTCAACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR GCA 90 bp GCATCCTATACCTTCCAATGGGCTTATTTTCAGGACTCACAGAGCCAGACTAATCGCTGCCCTGGCTGCTaGTGCTGCGCCGGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: ASYTFQWAYFQDSQSQTNRCPGC*CCAGLS
Trigger: GCTGAGCCCGGCGCAGCAGCAGCAGCCAGGGCAGCG...ATTAGTCTGGCTCTGTGAGTCCTGAAAATAAGCCCATTGGAAGGTATAGGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR GCA 90 bp CAGGCATCTCTGGGATTCTTGCCTTTATTTGTGGTTGAAAGCATAGGCTCTGGACCCGGTTCCCCATCTTaGCCGAGGGGCCGGCGACCA +
Preference number: 4 (lower is better)
Translates to: QASLGFLPLFVVESIGSGPGSPS*PRGRRP
Trigger: TGGTCGCCGGCCCCTCGGGCAAGATGGGGAACCGGG...TCCAGAGCCTATGCTTTCAACCACAAATAAAGGCAAGAATCCCAGAGATGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR TCA 90 bp GTTACTTGCCTACTGATGTCCACACATGCGACTACTCATGATTTACTGCAACGGCTCGCCTCTACGACCTaGCAGGGAGTAGGGGCCGCG +
Preference number: 4 (lower is better)
Translates to: VTCLLMSTHATTHDLLQRLASTT*QGVGAA
Trigger: CGCGGCCCCTACTCCCTGTCAGGTCGTAGAGGCGAG...CCGTTGCAGTAAATCATGAGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp AGAGCATCCTATACCTTCCAATGGGCTTATTTTCAGGACTCACAGAGCCAGACTCTCGCCTCTACGACCTaGCAGGGAGTAGGGGCCGCG +
Preference number: 4 (lower is better)
Translates to: RASYTFQWAYFQDSQSQTLASTT*QGVGAA
Trigger: CGCGGCCCCTACTCCCTGTCAGGTCGTAGAGGCGAG...AGTCTGGCTCTGTGAGTCCTGAAAATAAGCCCATTGGAAGGTATAGGATGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR TCA 90 bp AATGTCTGCTCCAGTGGGGGCAGGACTTTATTGCTATTGTTCACCTCTGTATCACTCGCCTCTACGACCTaGCAGGGAGTAGGGGCCGCG +
Preference number: 4 (lower is better)
Translates to: NVCSSGGRTLLLLFTSVSLASTT*QGVGAA
Trigger: CGCGGCCCCTACTCCCTGTCAGGTCGTAGAGGCGAG...TGATACAGAGGTGAACAATAGCAATAAAGTCCTGCCCCCACTGGAGCAGACATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR GCA 90 bp ACCCAGGAACATGTCAATGCTGAGATGCCTGGAATTCATCTTCATAAGTCCTCTTGCCCTGGCTGCTGCTaGTGCGCCGGGCTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: TQEHVNAEMPGIHLHKSSCPGCC*CAGLSQ
Trigger: CTGGCTGAGCCCGGCGCAGCAGCAGCAGCCAGGGCA...AGAGGACTTATGAAGATGAATTCCAGGCATCTCAGCATTGACATGTTCCTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR GCA 90 bp TATTCACTCCCTTGTTTAATGTCTGCTCCAGTGGGGGCAGGACTTTATTGCTATCCCGGTTCCCCATCTTaGCCGAGGGGCCGGCGACCA +
Preference number: 4 (lower is better)
Translates to: YSLPCLMSAPVGAGLYCYPGSPS*PRGRRP
Trigger: TGGTCGCCGGCCCCTCGGGCAAGATGGGGAACCGGG...ATAGCAATAAAGTCCTGCCCCCACTGGAGCAGACATTAAACAAGGGAGTGAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR GCA 90 bp AGGCTCGCCCCATCCTTCAAGGCCTACATCACCTGGTCCCTGACCTCTTTCCTTCTCTGCCAGCATGGCTaGCTTTATGTCCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: RLAPSFKAYITWSLTSFLLCQHG*LYVLLP
Trigger: GGGAAGAAGGACATAAAGGCAGCCATGCTGGCAGAG...AAGGAAAGAGGTCAGGGACCAGGTGATGTAGGCCTTGAAGGATGGGGCGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR TCA 90 bp AAAATTCCAGTTGGCTTCTGGCTGTTTCCTACATGTGAATCATCTGGTCCTTGGCTCGCCTCTACGACCTaGCAGGGAGTAGGGGCCGCG +
Preference number: 4 (lower is better)
Translates to: KIPVGFWLFPTCESSGPWLASTT*QGVGAA
Trigger: CGCGGCCCCTACTCCCTGTCAGGTCGTAGAGGCGAG...CCAAGGACCAGATGATTCACATGTAGGAAACAGCCAGAAGCCAACTGGAATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp AGAGGACGACATTTTGGTGCAAGTCCTCAATCCTGTATTCCTGAAACTCTGTTATGCCCTGGCTGCTGCTaGTGCGCCGGGCTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: RGRHFGASPQSCIPETLLCPGCC*CAGLSQ
Trigger: CTGGCTGAGCCCGGCGCAGCAGCAGCAGCCAGGGCA...TAACAGAGTTTCAGGAATACAGGATTGAGGACTTGCACCAAAATGTCGTCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR GCA 90 bp AGCGATGAATGCATTAGTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCTGCCCTGGCTGCTGCTaGTGCGCCGGGCTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: SDECISKTGYLPTDVHTCCPGCC*CAGLSQ
Trigger: CTGGCTGAGCCCGGCGCAGCAGCAGCAGCCAGGGCA...GCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTACTAATGCATTCATCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp AATGCATTAGTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCGACTACTCGCTGCCCTGGCTGCTaGTGCTGCGCCGGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: NALVKLVTCLLMSTHATTRCPGC*CCAGLS
Trigger: GCTGAGCCCGGCGCAGCAGCAGCAGCCAGGGCAGCG...AGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTACTAATGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp CACATGCGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGCTTTCGCCGCTGCCCTGGCTGCTaGTGCTGCGCCGGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: HMRLLMIYCNGYQICCFRRCPGC*CCAGLS
Trigger: GCTGAGCCCGGCGCAGCAGCAGCAGCCAGGGCAGCG...GCGAAAGCAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCGCATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp AGCGATGAATGCATTAGTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCCCCGGTTCCCCATCTTaGCCGAGGGGCCGGCGACCA +
Preference number: 4 (lower is better)
Translates to: SDECISKTGYLPTDVHTCPGSPS*PRGRRP
Trigger: TGGTCGCCGGCCCCTCGGGCAAGATGGGGAACCGGG...GCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTACTAATGCATTCATCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp AGAGCTCACCAAGCCTTCAAAGCTTCTTCCTTCCCTACAGAGAGCATCCTATACGCCGAAAACGCGTCCTaGAGACGGTTCACCAGCGGG +
Preference number: 4 (lower is better)
Translates to: RAHQAFKASSFPTESILYAENAS*RRFTSG
Trigger: CCCGCTGGTGAACCGTCTGCAGGACGCGTTTTCGGC...GTATAGGATGCTCTCTGTAGGGAAGGAAGAAGCTTTGAAGGCTTGGTGAGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR CCA 90 bp GTTACTTGCCTACTGATGTCCACACATGCGACTACTCATGATTTACTGCAACGGGGGAATGGCAGGAGCTaGTCCTCGGCCGGATGTGGG +
Preference number: 4 (lower is better)
Translates to: VTCLLMSTHATTHDLLQRGNGRS*SSAGCG
Trigger: CCCACATCCGGCCGAGGACCAGCTCCTGCCATTCCC...CCGTTGCAGTAAATCATGAGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp AGAGCATCCTATACCTTCCAATGGGCTTATTTTCAGGACTCACAGAGCCAGACTCGACCAGCTGGTCCCTaGTCGCCTCTACGACCTGAC +
Preference number: 4 (lower is better)
Translates to: RASYTFQWAYFQDSQSQTRPAGP*SPLRPD
Trigger: GTCAGGTCGTAGAGGCGAGCAGGGACCAGCTGGTCG...AGTCTGGCTCTGTGAGTCCTGAAAATAAGCCCATTGGAAGGTATAGGATGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR GCA 90 bp TATAAAGCCTCTAAAAGGTTAGCAGTTTCTGAGTCAAACCCCAAAGGTTTGACATGCCCTGGCTGCTGCTaGTGCGCCGGGCTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: YKASKRLAVSESNPKGLTCPGCC*CAGLSQ
Trigger: CTGGCTGAGCCCGGCGCAGCAGCAGCAGCCAGGGCA...TGTCAAACCTTTGGGGTTTGACTCAGAAACTGCTAACCTTTTAGAGGCTTTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp AGCGATGAATGCATTAGTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCATCCACTGGAGGGGGTaGCGGAGTGGACACGGTGGC +
Preference number: 4 (lower is better)
Translates to: SDECISKTGYLPTDVHTCIHWRG*RSGHGG
Trigger: GCCACCGTGTCCACTCCGGCACCCCCTCCAGTGGAT...GCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTACTAATGCATTCATCGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp ATGTCCACACATGCGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGGGGCCGGCGACCAGCTaGTCCCTGCTCGCCTCTACG +
Preference number: 4 (lower is better)
Translates to: MSTHATTHDLLQRLSNMLGPATS*SLLAST
Trigger: CGTAGAGGCGAGCAGGGACCAGCTGGTCGCCGGCCC...CAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCGCATGTGTGGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp GGAGTAGGTAGTAGCATTAATGGTAGACAACAGAATTACTGTCATCCTAAACAGCTCGCCTCTACGACCTaGCAGGGAGTAGGGGCCGCG +
Preference number: 4 (lower is better)
Translates to: GVGSSINGRQQNYCHPKQLASTT*QGVGAA
Trigger: CGCGGCCCCTACTCCCTGTCAGGTCGTAGAGGCGAG...CTGTTTAGGATGACAGTAATTCTGTTGTCTACCATTAATGCTACTACCTACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp AAATATGTATGGCTTAGGTCTAAGCCCACTATCTCATATCTGAAGAATTACGTTCGCTGCCCTGGCTGCTaGTGCTGCGCCGGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: KYVWLRSKPTISYLKNYVRCPGC*CCAGLS
Trigger: GCTGAGCCCGGCGCAGCAGCAGCAGCCAGGGCAGCG...AACGTAATTCTTCAGATATGAGATAGTGGGCTTAGACCTAAGCCATACATATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp TCCAATGGGCTTATTTTCAGGACTCACAGAGCCAGACTAATGCCACACTCCAACCCCCCACGTAACCCCTaGGAAGAGGCAACAGTTTGT +
Preference number: 4 (lower is better)
Translates to: SNGLIFRTHRARLMPHSNPPRNP*EEATVC
Trigger: ACAAACTGTTGCCTCTTCGCAGGGGTTACGTGGGGG...GTTGGAGTGTGGCATTAGTCTGGCTCTGTGAGTCCTGAAAATAAGCCCATTGGA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR GCA 90 bp AGGCTCGCCCCATCCTTCAAGGCCTACATCACCTGGTCCCTGACCTCTTTCCTTGGGGCAGGACTTTATTaGTATTGTTCACCTCTGTAT +
Preference number: 4 (lower is better)
Translates to: RLAPSFKAYITWSLTSFLGAGLY*YCSPLY
Trigger: ATACAGAGGTGAACAATAGCAATAAAGTCCTGCCCC...AAGGAAAGAGGTCAGGGACCAGGTGATGTAGGCCTTGAAGGATGGGGCGAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR CCA 90 bp CAAAACACAAAACCACATTTAGCACAAAGCCAAACCCTGAAGTATATAATCCGTGGGCCGGCGACCAGCTaGTCCCTGCTCGCCTCTACG +
Preference number: 4 (lower is better)
Translates to: QNTKPHLAQSQTLKYIIRGPATS*SLLAST
Trigger: CGTAGAGGCGAGCAGGGACCAGCTGGTCGCCGGCCC...ACGGATTATATACTTCAGGGTTTGGCTTTGTGCTAAATGTGGTTTTGTGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp AGGCTCGCCCCATCCTTCAAGGCCTACATCACCTGGTCCCTGACCTCTTTCCTTCCTGATTTCCAACTGTaGTTTTCTTGTGAACCTGAC +
Preference number: 4 (lower is better)
Translates to: RLAPSFKAYITWSLTSFLPDFQL*FSCEPD
Trigger: GTCAGGTTCACAAGAAAACCACAGTTGGAAATCAGG...AAGGAAAGAGGTCAGGGACCAGGTGATGTAGGCCTTGAAGGATGGGGCGAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR CCA 90 bp GCAATGAAGATGAGCGATGAATGCATTAGTAAAACTGGTTACTTGCCTACTGATGTCCTCGGCCGGATGTaGGCCTTGCGAGGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: AMKMSDECISKTGYLPTDVLGRM*ALRGEH
Trigger: GTGCTCCCCTCGCAAGGCCCACATCCGGCCGAGGAC...ATCAGTAGGCAAGTAACCAGTTTTACTAATGCATTCATCGCTCATCTTCATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp CACTATCTCATATCTGAAGAATTACGTTTAATGAGCTACCTGGTAGATAGCCTAGGGTGGTCTCCGGCTTaGGACACTGGGCGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: HYLISEELRLMSYLVDSLGWSPA*DTGRGP
Trigger: AGGGCCCCGCCCAGTGTCCCAAGCCGGAGACCACCC...TAGGCTATCTACCAGGTAGCTCATTAAACGTAATTCTTCAGATATGAGATAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp AAATATGTATGGCTTAGGTCTAAGCCCACTATCTCATATCTGAAGAATTACGTTTGCCCTGGCTGCTGCTaGTGCGCCGGGCTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: KYVWLRSKPTISYLKNYVCPGCC*CAGLSQ
Trigger: CTGGCTGAGCCCGGCGCAGCAGCAGCAGCCAGGGCA...AACGTAATTCTTCAGATATGAGATAGTGGGCTTAGACCTAAGCCATACATATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp CGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGCTTTCGCATAATTCCCGGTTCCCCATCTTaGCCGAGGGGCCGGCGACCA +
Preference number: 4 (lower is better)
Translates to: RLLMIYCNGYQICCFRIIPGSPS*PRGRRP
Trigger: TGGTCGCCGGCCCCTCGGGCAAGATGGGGAACCGGG...AATTATGCGAAAGCAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp GTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCGACTACTCATGATTTAGCCGAAAACGCGTCCTaGAGACGGTTCACCAGCGGG +
Preference number: 4 (lower is better)
Translates to: VKLVTCLLMSTHATTHDLAENAS*RRFTSG
Trigger: CCCGCTGGTGAACCGTCTGCAGGACGCGTTTTCGGC...TAAATCATGAGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp GAATTCATCTTCATAAGTCCTCTGTGGGATGAGGTTGGCTTGGACAACTCCAGGGTCGTCTTGTTACAATaGCCGACCCTCGAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: EFIFISPLWDEVGLDNSRVVLLQ*PTLEGE
Trigger: TTCTCCCTCGAGGGTCGGGCATTGTAACAAGACGAC...CCTGGAGTTGTCCAAGCCAACCTCATCCCACAGAGGACTTATGAAGATGAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR GCA 90 bp AACCAACTACCACCTTTGTCTTCCCTCACAGTGTTCCAGACACACTGGCCTTGCCACGCGATCTGTTTCTaGTTCAATCTCAAGGCGAAC +
Preference number: 4 (lower is better)
Translates to: NQLPPLSSLTVFQTHWPCHAICF*FNLKAN
Trigger: GTTCGCCTTGAGATTGAAGCAGAAACAGATCGCGTG...GCAAGGCCAGTGTGTCTGGAACACTGTGAGGGAAGACAAAGGTGGTAGTTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR GCA 90 bp AGGCTCGCCCCATCCTTCAAGGCCTACATCACCTGGTCCCTGACCTCTTTCCTTTCCCTCGTGATGAACTaGATAATCATTTCTCTGATC +
Preference number: 4 (lower is better)
Translates to: RLAPSFKAYITWSLTSFLSLVMN*IIISLI
Trigger: GATCAGAGAAATGATTATGCAGTTCATCACGAGGGA...AAGGAAAGAGGTCAGGGACCAGGTGATGTAGGCCTTGAAGGATGGGGCGAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR GCA 90 bp TTCAGACTTCATTCAACATTGGCATCTCCTTTTAGCAGAATACAAACCCTTTGGATCCACTGGAGGGGGTaGCGGAGTGGACACGGTGGC +
Preference number: 4 (lower is better)
Translates to: FRLHSTLASPFSRIQTLWIHWRG*RSGHGG
Trigger: GCCACCGTGTCCACTCCGGCACCCCCTCCAGTGGAT...CCAAAGGGTTTGTATTCTGCTAAAAGGAGATGCCAATGTTGAATGAAGTCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp GTTACTTGCCTACTGATGTCCACACATGCGACTACTCATGATTTACTGCAACGGGGTGACCTGCGAGAGTaGTGTATCCAGGAGTCATCC +
Preference number: 4 (lower is better)
Translates to: VTCLLMSTHATTHDLLQRGDLRE*CIQESS
Trigger: GGATGACTCCTGGATACAGCACTCTCGCAGGTCACC...CCGTTGCAGTAAATCATGAGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp GTTACTTGCCTACTGATGTCCACACATGCGACTACTCATGATTTACTGCAACGGTTGGAGGAGGTGACCTaGGAGAGTGCTGTATCCAGG +
Preference number: 4 (lower is better)
Translates to: VTCLLMSTHATTHDLLQRLEEVT*ESAVSR
Trigger: CCTGGATACAGCACTCTCGCAGGTCACCTCCTCCAA...CCGTTGCAGTAAATCATGAGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp AAATATGTATGGCTTAGGTCTAAGCCCACTATCTCATATCTGAAGAATTACGTTGGGCCGGCGACCAGCTaGTCCCTGCTCGCCTCTACG +
Preference number: 4 (lower is better)
Translates to: KYVWLRSKPTISYLKNYVGPATS*SLLAST
Trigger: CGTAGAGGCGAGCAGGGACCAGCTGGTCGCCGGCCC...AACGTAATTCTTCAGATATGAGATAGTGGGCTTAGACCTAAGCCATACATATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp TGGGCTTATTTTCAGGACTCACAGAGCCAGACTAATGCCACACTCCAACAGCAGCTGATACTCGATATCTaGTGGCTGATCTCCCACAGG +
Preference number: 4 (lower is better)
Translates to: WAYFQDSQSQTNATLQQQLILDI*WLISHR
Trigger: CCTGTGGGAGATCAGCCACCAGATATCGAGTATCAG...CTGCTGTTGGAGTGTGGCATTAGTCTGGCTCTGTGAGTCCTGAAAATAAGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR CCA 90 bp AGGCTCGCCCCATCCTTCAAGGCCTACATCACCTGGTCCCTGACCTCTTTCCTTATCAATAGCAATACCTaGTCCTTTGTCTTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: RLAPSFKAYITWSLTSFLINSNT*SFVFPS
Trigger: AGAAGGGAAGACAAAGGACCAGGTATTGCTATTGAT...AAGGAAAGAGGTCAGGGACCAGGTGATGTAGGCCTTGAAGGATGGGGCGAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR CCA 90 bp GTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCGACTACTCATGATTTACCAGGAGTCATCCACTaGAGGGGGTGCCGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: VKLVTCLLMSTHATTHDLPGVIH*RGCRSG
Trigger: TCCACTCCGGCACCCCCTCCAGTGGATGACTCCTGG...TAAATCATGAGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp GTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCGACTACTCATGATTTATGGGCCTGGACGGAATaGGACTGGAGGAGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: VKLVTCLLMSTHATTHDLWAWTE*DWRSPR
Trigger: TCTGGGGCTCCTCCAGTCCCATTCCGTCCAGGCCCA...TAAATCATGAGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp ATAGGCAATTATGGAGTAGGTAGTAGCATTAATGGTAGACAACAGAATTACTGTGGGTGGTCTCCGGCTTaGGACACTGGGCGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: IGNYGVGSSINGRQQNYCGWSPA*DTGRGP
Trigger: AGGGCCCCGCCCAGTGTCCCAAGCCGGAGACCACCC...ACAGTAATTCTGTTGTCTACCATTAATGCTACTACCTACTCCATAATTGCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp CGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGCTTTCGCATAATTGGGTGGTCTCCGGCTTaGGACACTGGGCGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: RLLMIYCNGYQICCFRIIGWSPA*DTGRGP
Trigger: AGGGCCCCGCCCAGTGTCCCAAGCCGGAGACCACCC...AATTATGCGAAAGCAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp AGAGCTCACCAAGCCTTCAAAGCTTCTTCCTTCCCTACAGAGAGCATCCTATACGGGATGAGGTTGGCTTaGACAACTCCAGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: RAHQAFKASSFPTESILYGMRLA*TTPGIS
Trigger: AGAGATGCCTGGAGTTGTCCAAGCCAACCTCATCCC...GTATAGGATGCTCTCTGTAGGGAAGGAAGAAGCTTTGAAGGCTTGGTGAGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
3UTR CAA 72 bp AATGTCTGCTCCAGTGGGGGCAGGACTTTATTGCTATaGTTCACCTCTGTATCACCAGGGCCTAGAATGGCA +
Preference number: 4 (lower is better)
Translates to: NVCSSGGRTLLL*FTSVSPGPRMA
Trigger: TGCCATTCTAGGCCCTGGTGATACAGAGGTGAACAATAGCAATAAAGTCCTGCCCCCACTGGAGCAGACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR CAA 72 bp TCCCTGACCTCTTTCCTTGTTAACCAACTACCACCTTaGTCTTCCCTCACAGTGTTCCAGACACACTGGCCT +
Preference number: 4 (lower is better)
Translates to: SLTSFLVNQLPP*SSLTVFQTHWP
Trigger: AGGCCAGTGTGTCTGGAACACTGTGAGGGAAGACAAAGGTGGTAGTTGGTTAACAAGGAAAGAGGTCAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR TCA 90 bp AATCTAGATATACAGGAGGAAGCAGCAAGTGGAGAGGTCCACTCAGTGGCAGAGTGGTTGGTAAGTTGCTaGTTAAGGACCTTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: NLDIQEEAASGEVHSVAEWLVSC*LRTFCR
Trigger: CCTGCAGAAGGTCCTTAATCAGCAACTTACCAACCA...CTCTGCCACTGAGTGGACCTCTCCACTTGCTGCTTCCTCCTGTATATCTAGATT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR TCA 90 bp ATGTCCACACATGCGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGAGTGGGACGAGTTGGTaGTGGGGGTGGTCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: MSTHATTHDLLQRLSNMLSGTSW*WGWSPA
Trigger: AGCCGGAGACCACCCCCATCACCAACTCGTCCCACT...CAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCGCATGTGTGGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp CCCAGGAACATGTCAATGCTGAGATGCCTGGAATTCATCTTCATAAGTCCTCTGAAGTCCTCTGTGGGATaGGGTTGGCTTGGACAACTC +
Preference number: 4 (lower is better)
Translates to: PRNMSMLRCLEFIFISPLKSSVG*GWLGQL
Trigger: GAGTTGTCCAAGCCAACCTCATCCCACAGAGGACTT...CAGAGGACTTATGAAGATGAATTCCAGGCATCTCAGCATTGACATGTTCCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR TCA 90 bp AATCTAGATATACAGGAGGAAGCAGCAAGTGGAGAGGTCCACTCAGTGGCAGAGCCTCAGGAGTTAAGCTaGACTAAATCCCCAAGGCTT +
Preference number: 4 (lower is better)
Translates to: NLDIQEEAASGEVHSVAEPQELS*TKSPRL
Trigger: AAGCCTTGGGGATTTAGTTCAGCTTAACTCCTGAGG...CTCTGCCACTGAGTGGACCTCTCCACTTGCTGCTTCCTCCTGTATATCTAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR TCA 90 bp AGGCTCGCCCCATCCTTCAAGGCCTACATCACCTGGTCCCTGACCTCTTTCCTTGTAAAAGTGGTACTCTaGTGTTTAATGACTTCTCAC +
Preference number: 4 (lower is better)
Translates to: RLAPSFKAYITWSLTSFLVKVVL*CLMTSH
Trigger: GTGAGAAGTCATTAAACATCAGAGTACCACTTTTAC...AAGGAAAGAGGTCAGGGACCAGGTGATGTAGGCCTTGAAGGATGGGGCGAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR GCA 90 bp GGAGTAGGTAGTAGCATTAATGGTAGACAACAGAATTACTGTCATCCTAAACAGCGACCAGCTGGTCCCTaGTCGCCTCTACGACCTGAC +
Preference number: 4 (lower is better)
Translates to: GVGSSINGRQQNYCHPKQRPAGP*SPLRPD
Trigger: GTCAGGTCGTAGAGGCGAGCAGGGACCAGCTGGTCG...CTGTTTAGGATGACAGTAATTCTGTTGTCTACCATTAATGCTACTACCTACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp TTCAGACTTCATTCAACATTGGCATCTCCTTTTAGCAGAATACAAACCCTTTGGCGACCAGCTGGTCCCTaGTCGCCTCTACGACCTGAC +
Preference number: 4 (lower is better)
Translates to: FRLHSTLASPFSRIQTLWRPAGP*SPLRPD
Trigger: GTCAGGTCGTAGAGGCGAGCAGGGACCAGCTGGTCG...CCAAAGGGTTTGTATTCTGCTAAAAGGAGATGCCAATGTTGAATGAAGTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp TATAAAGCCTCTAAAAGGTTAGCAGTTTCTGAGTCAAACCCCAAAGGTTTGACACGACCAGCTGGTCCCTaGTCGCCTCTACGACCTGAC +
Preference number: 4 (lower is better)
Translates to: YKASKRLAVSESNPKGLTRPAGP*SPLRPD
Trigger: GTCAGGTCGTAGAGGCGAGCAGGGACCAGCTGGTCG...TGTCAAACCTTTGGGGTTTGACTCAGAAACTGCTAACCTTTTAGAGGCTTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp CTTCCAGATCCTTTACTCCCTCCCTTCTTTGAAGAGCCTGCTCTAATGTCAACTCTGTCGACATCCTCCTaGGAATCACATGCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: LPDPLLPPFFEEPALMSTLSTSS*ESHASS
Trigger: TGAGCTGGCATGTGATTCCCAGGAGGATGTCGACAG...AGTTGACATTAGAGCAGGCTCTTCAAAGAAGGGAGGGAGTAAAGGATCTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR CCA 90 bp GTTACTTGCCTACTGATGTCCACACATGCGACTACTCATGATTTACTGCAACGGCTGTCGACATCCTCCTaGGAATCACATGCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: VTCLLMSTHATTHDLLQRLSTSS*ESHASS
Trigger: TGAGCTGGCATGTGATTCCCAGGAGGATGTCGACAG...CCGTTGCAGTAAATCATGAGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp CGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGCTTTCGCATAATTGTCCTCGGCCGGATGTaGGCCTTGCGAGGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: RLLMIYCNGYQICCFRIIVLGRM*ALRGEH
Trigger: GTGCTCCCCTCGCAAGGCCCACATCCGGCCGAGGAC...AATTATGCGAAAGCAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp CAAAACACAAAACCACATTTAGCACAAAGCCAAACCCTGAAGTATATAATCCGTGGGAATGGCAGGAGCTaGTCCTCGGCCGGATGTGGG +
Preference number: 4 (lower is better)
Translates to: QNTKPHLAQSQTLKYIIRGNGRS*SSAGCG
Trigger: CCCACATCCGGCCGAGGACCAGCTCCTGCCATTCCC...ACGGATTATATACTTCAGGGTTTGGCTTTGTGCTAAATGTGGTTTTGTGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp ATGTCCACACATGCGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGTGGACGGAATGGGACTaGAGGAGCCCCAGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: MSTHATTHDLLQRLSNMLWTEWD*RSPRVG
Trigger: CCCCACTCTGGGGCTCCTCCAGTCCCATTCCGTCCA...CAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCGCATGTGTGGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
3UTR CAA 72 bp CTCTGGAGCTCAACAGCCTGGGTTCAAATTTCTGCTTaGCCACCAACTAGCTGTGTGACTTTGGTAAGTTGG +
Preference number: 4 (lower is better)
Translates to: LWSSTAWVQISA*PPTSCVTLVSW
Trigger: CCAACTTACCAAAGTCACACAGCTAGTTGGTGGCAAAGCAGAAATTTGAACCCAGGCTGTTGAGCTCCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
3UTR CAA 72 bp GGTTGGCTTGGACAACTCCAGGCATCTCTGGGATTCTaGCCTTTATTTGTGGTTGAAAGCATAGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: GWLGQLQASLGF*PLFVVESIGSG
Trigger: TCCAGAGCCTATGCTTTCAACCACAAATAAAGGCAAGAATCCCAGAGATGCCTGGAGTTGTCCAAGCCAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
3UTR CAA 72 bp TTCATCTTCATAAGTCCTCTGTGGGATGAGGTTGGCTaGGACAACTCCAGGCATCTCTGGGATTCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: FIFISPLWDEVG*DNSRHLWDSCL
Trigger: AAGGCAAGAATCCCAGAGATGCCTGGAGTTGTCCAAGCCAACCTCATCCCACAGAGGACTTATGAAGATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR TCA 90 bp ATGTCCACACATGCGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGATCTCATCCCGGCGCTaGGCCTGCTCAGCAGATTCC +
Preference number: 4 (lower is better)
Translates to: MSTHATTHDLLQRLSNMLISSRR*ACSADS
Trigger: GGAATCTGCTGAGCAGGCTCAGCGCCGGGATGAGAT...CAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCGCATGTGTGGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp GTGGTTGAAAGCATAGGCTCTGGAGCTCAACAGCCTGGGTTCAAATTTCTGCTTGCCTTTATTTGTGGTTaGAAGCATAGGCTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: VVESIGSGAQQPGFKFLLAFICG*KHRLWS
Trigger: GCTCCAGAGCCTATGCTTTCAACCACAAATAAAGGC...AAGCAGAAATTTGAACCCAGGCTGTTGAGCTCCAGAGCCTATGCTTTCAACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR GCA 90 bp TATAGGATGACAAGTATAGCATGCAATGGCATAAAGAGGTCTATGTGTGAGTTACGACCAGCTGGTCCCTaGTCGCCTCTACGACCTGAC +
Preference number: 4 (lower is better)
Translates to: YRMTSIACNGIKRSMCELRPAGP*SPLRPD
Trigger: GTCAGGTCGTAGAGGCGAGCAGGGACCAGCTGGTCG...TAACTCACACATAGACCTCTTTATGCCATTGCATGCTATACTTGTCATCCTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR GCA 90 bp TATAGGATGACAAGTATAGCATGCAATGGCATAAAGAGGTCTATGTGTGAGTTAGCCGAAAACGCGTCCTaGAGACGGTTCACCAGCGGG +
Preference number: 4 (lower is better)
Translates to: YRMTSIACNGIKRSMCELAENAS*RRFTSG
Trigger: CCCGCTGGTGAACCGTCTGCAGGACGCGTTTTCGGC...TAACTCACACATAGACCTCTTTATGCCATTGCATGCTATACTTGTCATCCTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR GCA 90 bp GCATCTAGTTTAACTTCCATTTGGAGGGCACAAAGCATATTGTGGGAGGTTCATCCCCCACGTAACCCCTaGGAAGAGGCAACAGTTTGT +
Preference number: 4 (lower is better)
Translates to: ASSLTSIWRAQSILWEVHPPRNP*EEATVC
Trigger: ACAAACTGTTGCCTCTTCGCAGGGGTTACGTGGGGG...ATGAACCTCCCACAATATGCTTTGTGCCCTCCAAATGGAAGTTAAACTAGATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR GCA 90 bp AAAATTCCAGTTGGCTTCTGGCTGTTTCCTACATGTGAATCATCTGGTCCTTGGCTCTGCCAGCATGGCTaGCTTTATGTCCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: KIPVGFWLFPTCESSGPWLCQHG*LYVLLP
Trigger: GGGAAGAAGGACATAAAGGCAGCCATGCTGGCAGAG...CCAAGGACCAGATGATTCACATGTAGGAAACAGCCAGAAGCCAACTGGAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp TATACCTTCCAATGGGCTTATTTTCAGGACTCACAGAGCCAGACTAATGCCACACTCTGCCAGCATGGCTaGCTTTATGTCCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: YTFQWAYFQDSQSQTNATLCQHG*LYVLLP
Trigger: GGGAAGAAGGACATAAAGGCAGCCATGCTGGCAGAG...TGTGGCATTAGTCTGGCTCTGTGAGTCCTGAAAATAAGCCCATTGGAAGGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR GCA 90 bp CAAGAGCTCACCAAGCCTTCAAAGCTTCTTCCTTCCCTACAGAGAGCATCCTATCCTCTGCTGAGCATTTaGGAAGCCAATGAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: QELTKPSKLLPSLQRASYPLLSI*EANEVF
Trigger: GAAGACTTCATTGGCTTCGCAAATGCTCAGCAGAGG...ATAGGATGCTCTCTGTAGGGAAGGAAGAAGCTTTGAAGGCTTGGTGAGCTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR GCA 90 bp CTTCCAGATCCTTTACTCCCTCCCTTCTTTGAAGAGCCTGCTCTAATGTCAACTCTCCTGGGAATCACATaGCAGCTCAAGGAAGCGATA +
Preference number: 4 (lower is better)
Translates to: LPDPLLPPFFEEPALMSTLLGIT*QLKEAI
Trigger: TATCGCTTCCTTGAGCTGGCATGTGATTCCCAGGAG...AGTTGACATTAGAGCAGGCTCTTCAAAGAAGGGAGGGAGTAAAGGATCTGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR GCA 90 bp GTTACTTGCCTACTGATGTCCACACATGCGACTACTCATGATTTACTGCAACGGGCCTGGTGTGCATGCTaGACGTCAAACTATGCACAT +
Preference number: 4 (lower is better)
Translates to: VTCLLMSTHATTHDLLQRAWCAC*TSNYAH
Trigger: ATGTGCATAGTTTGACGTGCAGCATGCACACCAGGC...CCGTTGCAGTAAATCATGAGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp AACCAACTACCACCTTTGTCTTCCCTCACAGTGTTCCAGACACACTGGCCTTGCAGGACGACATTTTGGTaGAAGTCCTCAATCCTGTAT +
Preference number: 4 (lower is better)
Translates to: NQLPPLSSLTVFQTHWPCRTTFW*KSSILY
Trigger: ATACAGGATTGAGGACTTGCACCAAAATGTCGTCCT...GCAAGGCCAGTGTGTCTGGAACACTGTGAGGGAAGACAAAGGTGGTAGTTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR GCA 90 bp TATTCACTCCCTTGTTTAATGTCTGCTCCAGTGGGGGCAGGACTTTATTGCTATACACACTGGCCTTGCTaGTCCTCTAAGACACTGAGC +
Preference number: 4 (lower is better)
Translates to: YSLPCLMSAPVGAGLYCYTHWPC*SSKTLS
Trigger: GCTCAGTGTCTTAGAGGAGCAGCAAGGCCAGTGTGT...ATAGCAATAAAGTCCTGCCCCCACTGGAGCAGACATTAAACAAGGGAGTGAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR CCA 90 bp CTTCCAGATCCTTTACTCCCTCCCTTCTTTGAAGAGCCTGCTCTAATGTCAACTCTGATACTCGATATCTaGTGGCTGATCTCCCACAGG +
Preference number: 4 (lower is better)
Translates to: LPDPLLPPFFEEPALMSTLILDI*WLISHR
Trigger: CCTGTGGGAGATCAGCCACCAGATATCGAGTATCAG...AGTTGACATTAGAGCAGGCTCTTCAAAGAAGGGAGGGAGTAAAGGATCTGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR CCA 90 bp GTCTGGAGGAGAGGAGATGAGCCAATAACCAAGAGCTCACCAAGCCTTCAAAGCCCTGATTTCCAACTGTaGTTTTCTTGTGAACCTGAC +
Preference number: 4 (lower is better)
Translates to: VWRRGDEPITKSSPSLQSPDFQL*FSCEPD
Trigger: GTCAGGTTCACAAGAAAACCACAGTTGGAAATCAGG...GCTTTGAAGGCTTGGTGAGCTCTTGGTTATTGGCTCATCTCCTCTCCTCCAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR CCA 90 bp CACTATCTCATATCTGAAGAATTACGTTTAATGAGCTACCTGGTAGATAGCCTACCAGGAGTCATCCACTaGAGGGGGTGCCGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: HYLISEELRLMSYLVDSLPGVIH*RGCRSG
Trigger: TCCACTCCGGCACCCCCTCCAGTGGATGACTCCTGG...TAGGCTATCTACCAGGTAGCTCATTAAACGTAATTCTTCAGATATGAGATAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp ATAGGCAATTATGGAGTAGGTAGTAGCATTAATGGTAGACAACAGAATTACTGTGGGAATGGCAGGAGCTaGTCCTCGGCCGGATGTGGG +
Preference number: 4 (lower is better)
Translates to: IGNYGVGSSINGRQQNYCGNGRS*SSAGCG
Trigger: CCCACATCCGGCCGAGGACCAGCTCCTGCCATTCCC...ACAGTAATTCTGTTGTCTACCATTAATGCTACTACCTACTCCATAATTGCCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp CACTATCTCATATCTGAAGAATTACGTTTAATGAGCTACCTGGTAGATAGCCTATGGACGGAATGGGACTaGAGGAGCCCCAGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: HYLISEELRLMSYLVDSLWTEWD*RSPRVG
Trigger: CCCCACTCTGGGGCTCCTCCAGTCCCATTCCGTCCA...TAGGCTATCTACCAGGTAGCTCATTAAACGTAATTCTTCAGATATGAGATAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp CAAAACACAAAACCACATTTAGCACAAAGCCAAACCCTGAAGTATATAATCCGTTGGACGGAATGGGACTaGAGGAGCCCCAGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: QNTKPHLAQSQTLKYIIRWTEWD*RSPRVG
Trigger: CCCCACTCTGGGGCTCCTCCAGTCCCATTCCGTCCA...ACGGATTATATACTTCAGGGTTTGGCTTTGTGCTAAATGTGGTTTTGTGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp CTATACAAACCTACCTTGGTCAGTACAACATATAAAGCCTCTAAAAGGTTAGCATGGGCCTGGACGGAATaGGACTGGAGGAGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: LYKPTLVSTTYKASKRLAWAWTE*DWRSPR
Trigger: TCTGGGGCTCCTCCAGTCCCATTCCGTCCAGGCCCA...TGCTAACCTTTTAGAGGCTTTATATGTTGTACTGACCAAGGTAGGTTTGTATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp CTATACAAACCTACCTTGGTCAGTACAACATATAAAGCCTCTAAAAGGTTAGCAATCTCATCCCGGCGCTaGGCCTGCTCAGCAGATTCC +
Preference number: 4 (lower is better)
Translates to: LYKPTLVSTTYKASKRLAISSRR*ACSADS
Trigger: GGAATCTGCTGAGCAGGCTCAGCGCCGGGATGAGAT...TGCTAACCTTTTAGAGGCTTTATATGTTGTACTGACCAAGGTAGGTTTGTATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp AAATATGTATGGCTTAGGTCTAAGCCCACTATCTCATATCTGAAGAATTACGTTAGTGGGACGAGTTGGTaGTGGGGGTGGTCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: KYVWLRSKPTISYLKNYVSGTSW*WGWSPA
Trigger: AGCCGGAGACCACCCCCATCACCAACTCGTCCCACT...AACGTAATTCTTCAGATATGAGATAGTGGGCTTAGACCTAAGCCATACATATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp AAAATTCCAGTTGGCTTCTGGCTGTTTCCTACATGTGAATCATCTGGTCCTTGGGCCATGGTAGGCAAATaGTCCCCAAAGTATAGGGCT +
Preference number: 4 (lower is better)
Translates to: KIPVGFWLFPTCESSGPWAMVGK*SPKYRA
Trigger: AGCCCTATACTTTGGGGATCATTTGCCTACCATGGC...CCAAGGACCAGATGATTCACATGTAGGAAACAGCCAGAAGCCAACTGGAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp TCACCAAGCCTTCAAAGCTTCTTCCTTCCCTACAGAGAGCATCCTATACCTTCCGGAACATGTCAATGCTaGGATGCCTGGAATTCATCT +
Preference number: 4 (lower is better)
Translates to: SPSLQSFFLPYREHPIPSGTCQC*DAWNSS
Trigger: AGATGAATTCCAGGCATCTCAGCATTGACATGTTCC...GGAAGGTATAGGATGCTCTCTGTAGGGAAGGAAGAAGCTTTGAAGGCTTGGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR TCA 90 bp GTCAACTCTTCAAAGAGGCCTTCCCTCATCACCTTGACAAAAATAAAGCTTGCCGCTCCTCTAAGACACTaGGCTTGGTTTTGCACTTGC +
Preference number: 4 (lower is better)
Translates to: VNSSKRPSLITLTKIKLAAPLRH*AWFCTC
Trigger: GCAAGTGCAAAACCAAGCTCAGTGTCTTAGAGGAGC...GGCAAGCTTTATTTTTGTCAAGGTGATGAGGGAAGGCCTCTTTGAAGAGTTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR TCA 90 bp GTCAACTCTTCAAAGAGGCCTTCCCTCATCACCTTGACAAAAATAAAGCTTGCCACATCACCTGGTCCCTaGCCTCTTTCCTTGTTAACC +
Preference number: 4 (lower is better)
Translates to: VNSSKRPSLITLTKIKLATSPGP*PLSLLT
Trigger: GGTTAACAAGGAAAGAGGTCAGGGACCAGGTGATGT...GGCAAGCTTTATTTTTGTCAAGGTGATGAGGGAAGGCCTCTTTGAAGAGTTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR TCA 90 bp AATGTCTGCTCCAGTGGGGGCAGGACTTTATTGCTATTGTTCACCTCTGTATCACACAACAGCCCTGCTTaGACTCACATGCTTTACTAC +
Preference number: 4 (lower is better)
Translates to: NVCSSGGRTLLLLFTSVSHNSPA*THMLYY
Trigger: GTAGTAAAGCATGTGAGTTCAAGCAGGGCTGTTGTG...TGATACAGAGGTGAACAATAGCAATAAAGTCCTGCCCCCACTGGAGCAGACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR GCA 90 bp ATAGGCAATTATGGAGTAGGTAGTAGCATTAATGGTAGACAACAGAATTACTGTGCCGAAAACGCGTCCTaGAGACGGTTCACCAGCGGG +
Preference number: 4 (lower is better)
Translates to: IGNYGVGSSINGRQQNYCAENAS*RRFTSG
Trigger: CCCGCTGGTGAACCGTCTGCAGGACGCGTTTTCGGC...ACAGTAATTCTGTTGTCTACCATTAATGCTACTACCTACTCCATAATTGCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp CGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGCTTTCGCATAATTGCCGAAAACGCGTCCTaGAGACGGTTCACCAGCGGG +
Preference number: 4 (lower is better)
Translates to: RLLMIYCNGYQICCFRIIAENAS*RRFTSG
Trigger: CCCGCTGGTGAACCGTCTGCAGGACGCGTTTTCGGC...AATTATGCGAAAGCAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp AGAGGACGACATTTTGGTGCAAGTCCTCAATCCTGTATTCCTGAAACTCTGTTAGTCGTCTTGTTACAATaGCCGACCCTCGAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: RGRHFGASPQSCIPETLLVVLLQ*PTLEGE
Trigger: TTCTCCCTCGAGGGTCGGGCATTGTAACAAGACGAC...TAACAGAGTTTCAGGAATACAGGATTGAGGACTTGCACCAAAATGTCGTCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR GCA 90 bp AATCTAGATATACAGGAGGAAGCAGCAAGTGGAGAGGTCCACTCAGTGGCAGAGTTAGAAGTAACAAGCTaGAGCACAAGAGGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: NLDIQEEAASGEVHSVAELEVTS*STRGRL
Trigger: AAGACGACCTCTTGTGCTGCAGCTTGTTACTTCTAA...CTCTGCCACTGAGTGGACCTCTCCACTTGCTGCTTCCTCCTGTATATCTAGATT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR GCA 90 bp CAAGAGCTCACCAAGCCTTCAAAGCTTCTTCCTTCCCTACAGAGAGCATCCTATGAAAAACTTCCTCTCTaGCAGCATGGCTGCCTTTAT +
Preference number: 4 (lower is better)
Translates to: QELTKPSKLLPSLQRASYEKLPL*QHGCLY
Trigger: ATAAAGGCAGCCATGCTGGCAGAGAGGAAGTTTTTC...ATAGGATGCTCTCTGTAGGGAAGGAAGAAGCTTTGAAGGCTTGGTGAGCTCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR GCA 90 bp GTTACTTGCCTACTGATGTCCACACATGCGACTACTCATGATTTACTGCAACGGTCTTGTGAACCTGACTaGTCCTCTGCTGAGCATTTG +
Preference number: 4 (lower is better)
Translates to: VTCLLMSTHATTHDLLQRSCEPD*SSAEHL
Trigger: CAAATGCTCAGCAGAGGAGCAGTCAGGTTCACAAGA...CCGTTGCAGTAAATCATGAGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp CAGGCATCTCTGGGATTCTTGCCTTTATTTGTGGTTGAAAGCATAGGCTCTGGATCTTGTGAACCTGACTaGTCCTCTGCTGAGCATTTG +
Preference number: 4 (lower is better)
Translates to: QASLGFLPLFVVESIGSGSCEPD*SSAEHL
Trigger: CAAATGCTCAGCAGAGGAGCAGTCAGGTTCACAAGA...TCCAGAGCCTATGCTTTCAACCACAAATAAAGGCAAGAATCCCAGAGATGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR GCA 90 bp GCACGTCAAACTATGCACATACTAGAGTTTCAGACTTCATTCAACATTGGCATCCTCCGAAGGAGTCACTaGTGCTGGGGAAAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: ARQTMHILEFQTSFNIGILRRSH*CWGKEV
Trigger: TACCTCCTTTCCCCAGCAGCAGTGACTCCTTCGGAG...GATGCCAATGTTGAATGAAGTCTGAAACTCTAGTATGTGCATAGTTTGACGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp CTGGGATTCTTGCCTTTATTTGTGGTTGAAAGCATAGGCTCTGGAGCTCAACAGTCTCTAGAACATCCCTaGCATCCGTTCCTTCATCCA +
Preference number: 4 (lower is better)
Translates to: LGFLPLFVVESIGSGAQQSLEHP*HPFLHP
Trigger: TGGATGAAGGAACGGATGCCAGGGATGTTCTAGAGA...CTGTTGAGCTCCAGAGCCTATGCTTTCAACCACAAATAAAGGCAAGAATCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR CCA 90 bp AATGTCTGCTCCAGTGGGGGCAGGACTTTATTGCTATTGTTCACCTCTGTATCATCTCTAGAACATCCCTaGCATCCGTTCCTTCATCCA +
Preference number: 4 (lower is better)
Translates to: NVCSSGGRTLLLLFTSVSSLEHP*HPFLHP
Trigger: TGGATGAAGGAACGGATGCCAGGGATGTTCTAGAGA...TGATACAGAGGTGAACAATAGCAATAAAGTCCTGCCCCCACTGGAGCAGACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR CCA 90 bp AAAATTCCAGTTGGCTTCTGGCTGTTTCCTACATGTGAATCATCTGGTCCTTGGTCCTCTCTGCCAGCATaGCTGCCTTTATGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: KIPVGFWLFPTCESSGPWSSLPA*LPLCPS
Trigger: AGAAGGACATAAAGGCAGCCATGCTGGCAGAGAGGA...CCAAGGACCAGATGATTCACATGTAGGAAACAGCCAGAAGCCAACTGGAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp CTGCTAACACCCAGGAACATGTCAATGCTGAGATGCCTGGAATTCATCTTCATATCCTCTCTGCCAGCATaGCTGCCTTTATGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LLTPRNMSMLRCLEFIFISSLPA*LPLCPS
Trigger: AGAAGGACATAAAGGCAGCCATGCTGGCAGAGAGGA...TATGAAGATGAATTCCAGGCATCTCAGCATTGACATGTTCCTGGGTGTTAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR CCA 90 bp TATTCACTCCCTTGTTTAATGTCTGCTCCAGTGGGGGCAGGACTTTATTGCTATTCCTCTCTGCCAGCATaGCTGCCTTTATGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: YSLPCLMSAPVGAGLYCYSSLPA*LPLCPS
Trigger: AGAAGGACATAAAGGCAGCCATGCTGGCAGAGAGGA...ATAGCAATAAAGTCCTGCCCCCACTGGAGCAGACATTAAACAAGGGAGTGAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR CCA 90 bp TGGGCTTATTTTCAGGACTCACAGAGCCAGACTAATGCCACACTCCAACAGCAGCTACTTCATGTTCTATaGAGAGCAACTGTCCCTGTA +
Preference number: 4 (lower is better)
Translates to: WAYFQDSQSQTNATLQQQLLHVL*RATVPV
Trigger: TACAGGGACAGTTGCTCTCCATAGAACATGAAGTAG...CTGCTGTTGGAGTGTGGCATTAGTCTGGCTCTGTGAGTCCTGAAAATAAGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR CCA 90 bp ATTCCAATTAGAGATCTTAAAGATAGGTCTCCAGAGGTTTTACTTCTTACCGAACCAGGAGTCATCCACTaGAGGGGGTGCCGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: IPIRDLKDRSPEVLLLTEPGVIH*RGCRSG
Trigger: TCCACTCCGGCACCCCCTCCAGTGGATGACTCCTGG...TTCGGTAAGAAGTAAAACCTCTGGAGACCTATCTTTAAGATCTCTAATTGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp AATGCATTAGTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCGACTACTAGTGTTGGCCTCCTTTaGGTTGTGGGGCTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: NALVKLVTCLLMSTHATTSVGLL*VVGLGG
Trigger: TCCTCCAAGCCCCACAACCCAAAGGAGGCCAACACT...AGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTACTAATGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp ATAGGCAATTATGGAGTAGGTAGTAGCATTAATGGTAGACAACAGAATTACTGTTGGGCCTGGACGGAATaGGACTGGAGGAGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: IGNYGVGSSINGRQQNYCWAWTE*DWRSPR
Trigger: TCTGGGGCTCCTCCAGTCCCATTCCGTCCAGGCCCA...ACAGTAATTCTGTTGTCTACCATTAATGCTACTACCTACTCCATAATTGCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp TATAAAGCCTCTAAAAGGTTAGCAGTTTCTGAGTCAAACCCCAAAGGTTTGACACCTCGTAGGCCTAGATaGAACTTGTGGAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: YKASKRLAVSESNPKGLTPRRPR*NLWRGS
Trigger: GGAGCCCCTCCACAAGTTCCATCTAGGCCTACGAGG...TGTCAAACCTTTGGGGTTTGACTCAGAAACTGCTAACCTTTTAGAGGCTTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp CAGGCATCTCTGGGATTCTTGCCTTTATTTGTGGTTGAAAGCATAGGCTCTGGATTCATAAGTCCTCTGTaGGATGAGGTTGGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: QASLGFLPLFVVESIGSGFISPL*DEVGLD
Trigger: GTCCAAGCCAACCTCATCCCACAGAGGACTTATGAA...TCCAGAGCCTATGCTTTCAACCACAAATAAAGGCAAGAATCCCAGAGATGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR CCA 90 bp TATTCACTCCCTTGTTTAATGTCTGCTCCAGTGGGGGCAGGACTTTATTGCTATCACCAGGGCCTAGAATaGCAGCTGGCAAAAAGCATA +
Preference number: 4 (lower is better)
Translates to: YSLPCLMSAPVGAGLYCYHQGLE*QLAKSI
Trigger: TATGCTTTTTGCCAGCTGCCATTCTAGGCCCTGGTG...ATAGCAATAAAGTCCTGCCCCCACTGGAGCAGACATTAAACAAGGGAGTGAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR CAA 72 bp TTGTTTAATGTCTGCTCCAGTGGGGGCAGGACTTTATaGCTATTGTTCACCTCTGTATCACCAGGGCCTAGA +
Preference number: 4 (lower is better)
Translates to: LFNVCSSGGRTL*LLFTSVSPGPR
Trigger: TCTAGGCCCTGGTGATACAGAGGTGAACAATAGCAATAAAGTCCTGCCCCCACTGGAGCAGACATTAAACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR CAA 72 bp ACACACTGGCCTTGCTGCTCCTCTAAGACACTGAGCTaGGTTTTGCACTTGCTATCTTCTGCCAAGAATACT +
Preference number: 4 (lower is better)
Translates to: THWPCCSSKTLS*VLHLLSSAKNT
Trigger: AGTATTCTTGGCAGAAGATAGCAAGTGCAAAACCAAGCTCAGTGTCTTAGAGGAGCAGCAAGGCCAGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR TCA 90 bp GTGGTTGAAAGCATAGGCTCTGGAGCTCAACAGCCTGGGTTCAAATTTCTGCTTATCATTTCTCTGATCTaGTACTCGATATCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: VVESIGSGAQQPGFKFLLIISLI*YSISGG
Trigger: GCCACCAGATATCGAGTATCAGATCAGAGAAATGAT...AAGCAGAAATTTGAACCCAGGCTGTTGAGCTCCAGAGCCTATGCTTTCAACCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR TCA 90 bp CTCACCAAGCCTTCAAAGCTTCTTCCTTCCCTACAGAGAGCATCCTATACCTTCATGGTTCTCAGACCTTaGGGATCAACTTCTTTAGCT +
Preference number: 4 (lower is better)
Translates to: LTKPSKLLPSLQRASYTFMVLRP*GSTSLA
Trigger: AGCTAAAGAAGTTGATCCTCAAGGTCTGAGAACCAT...GAAGGTATAGGATGCTCTCTGTAGGGAAGGAAGAAGCTTTGAAGGCTTGGTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR TCA 90 bp GGAAGCTACAAGGGCAGTGATTTTGTAAAGAATTATCCTGAGTCTGGAGGAGAGTGGTTGGTAAGTTGCTaGTTAAGGACCTTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GSYKGSDFVKNYPESGGEWLVSC*LRTFCR
Trigger: CCTGCAGAAGGTCCTTAATCAGCAACTTACCAACCA...CTCTCCTCCAGACTCAGGATAATTCTTTACAAAATCACTGCCCTTGTAGCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR TCA 90 bp ATGTCAATGCTGAGATGCCTGGAATTCATCTTCATAAGTCCTCTGTGGGATGAGCCTGTAGTTTGTTCCTaGAGTTTGGTAGGGTATCCC +
Preference number: 4 (lower is better)
Translates to: MSMLRCLEFIFISPLWDEPVVCS*SLVGYP
Trigger: GGGATACCCTACCAAACTTCAGGAACAAACTACAGG...CTCATCCCACAGAGGACTTATGAAGATGAATTCCAGGCATCTCAGCATTGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR TCA 90 bp AGCTTCTTCCTTCCCTACAGAGAGCATCCTATACCTTCCAATGGGCTTATTTTCTCCACAGCAAATTGCTaGACCATCTGCAGCAATGCT +
Preference number: 4 (lower is better)
Translates to: SFFLPYREHPIPSNGLIFSTANC*TICSNA
Trigger: AGCATTGCTGCAGATGGTTCAGCAATTTGCTGTGGA...GAAAATAAGCCCATTGGAAGGTATAGGATGCTCTCTGTAGGGAAGGAAGAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR TCA 90 bp GGAAGCTACAAGGGCAGTGATTTTGTAAAGAATTATCCTGAGTCTGGAGGAGAGTCCAGGGTATCTACTTaGTCCCCTGACCCTTCAATT +
Preference number: 4 (lower is better)
Translates to: GSYKGSDFVKNYPESGGESRVST*SPDPSI
Trigger: AATTGAAGGGTCAGGGGATCAAGTAGATACCCTGGA...CTCTCCTCCAGACTCAGGATAATTCTTTACAAAATCACTGCCCTTGTAGCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR TCA 90 bp GGAAGCTACAAGGGCAGTGATTTTGTAAAGAATTATCCTGAGTCTGGAGGAGAGGATTTTAGCACCACCTaGGAGTTCCAGGGTATCTAC +
Preference number: 4 (lower is better)
Translates to: GSYKGSDFVKNYPESGGEDFSTT*EFQGIY
Trigger: GTAGATACCCTGGAACTCTCAGGTGGTGCTAAAATC...CTCTCCTCCAGACTCAGGATAATTCTTTACAAAATCACTGCCCTTGTAGCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR TCA 90 bp ATAGGCAATTATGGAGTAGGTAGTAGCATTAATGGTAGACAACAGAATTACTGTATCTCATCCCGGCGCTaGGCCTGCTCAGCAGATTCC +
Preference number: 4 (lower is better)
Translates to: IGNYGVGSSINGRQQNYCISSRR*ACSADS
Trigger: GGAATCTGCTGAGCAGGCTCAGCGCCGGGATGAGAT...ACAGTAATTCTGTTGTCTACCATTAATGCTACTACCTACTCCATAATTGCCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp AATGCATTAGTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCGACTACTACACGGTGGCTGTGCTaGTGTCCCCAATTATCCCAA +
Preference number: 4 (lower is better)
Translates to: NALVKLVTCLLMSTHATTTRWLC*CPQLSQ
Trigger: TTGGGATAATTGGGGACATCAGCACAGCCACCGTGT...AGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTACTAATGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp ATGTCAATGCTGAGATGCCTGGAATTCATCTTCATAAGTCCTCTGTGGGATGAGCCCTTGCGAATCACCTaGTTTCCAACTGTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: MSMLRCLEFIFISPLWDEPLRIT*FPTVVF
Trigger: GAAAACCACAGTTGGAAATCAGGTGATTCGCAAGGG...CTCATCCCACAGAGGACTTATGAAGATGAATTCCAGGCATCTCAGCATTGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR TCA 90 bp GTTACTTGCCTACTGATGTCCACACATGCGACTACTCATGATTTACTGCAACGGACAAACACTCCTCTTTaGGTTTCCTCTCTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: VTCLLMSTHATTHDLLQRTNTPL*VSSLLL
Trigger: GAGCAAGAGAGAGGAAACTCAAAGAGGAGTGTTTGT...CCGTTGCAGTAAATCATGAGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp AAAATTCCAGTTGGCTTCTGGCTGTTTCCTACATGTGAATCATCTGGTCCTTGGGAGTTGAGCCATATGTaGAACCTCCAACCAGAAGTG +
Preference number: 4 (lower is better)
Translates to: KIPVGFWLFPTCESSGPWELSHM*NLQPEV
Trigger: CACTTCTGGTTGGAGGTTTCACATATGGCTCAACTC...CCAAGGACCAGATGATTCACATGTAGGAAACAGCCAGAAGCCAACTGGAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp AATCTAGATATACAGGAGGAAGCAGCAAGTGGAGAGGTCCACTCAGTGGCAGAGTCTCAGACTTTCTCTTaGAAAGACTCTCTCCCTATT +
Preference number: 4 (lower is better)
Translates to: NLDIQEEAASGEVHSVAESQTFS*KDSLPI
Trigger: AATAGGGAGAGAGTCTTTTCAAGAGAAAGTCTGAGA...CTCTGCCACTGAGTGGACCTCTCCACTTGCTGCTTCCTCCTGTATATCTAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR TCA 90 bp AGAGGACGACATTTTGGTGCAAGTCCTCAATCCTGTATTCCTGAAACTCTGTTAACTCCCTCCCTTCTTTaGAGAGCCTGCTCTAATGTC +
Preference number: 4 (lower is better)
Translates to: RGRHFGASPQSCIPETLLTPSLL*RACSNV
Trigger: GACATTAGAGCAGGCTCTTCAAAGAAGGGAGGGAGT...TAACAGAGTTTCAGGAATACAGGATTGAGGACTTGCACCAAAATGTCGTCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR GCA 90 bp TCCAATGGGCTTATTTTCAGGACTCACAGAGCCAGACTAATGCCACACTCCAACTTAGAAGTAACAAGCTaGAGCACAAGAGGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: SNGLIFRTHRARLMPHSNLEVTS*STRGRL
Trigger: AAGACGACCTCTTGTGCTGCAGCTTGTTACTTCTAA...GTTGGAGTGTGGCATTAGTCTGGCTCTGTGAGTCCTGAAAATAAGCCCATTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR GCA 90 bp ATGTCCACACATGCGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGCCCCCACGTAACCCCTaGGAAGAGGCAACAGTTTGT +
Preference number: 4 (lower is better)
Translates to: MSTHATTHDLLQRLSNMLPPRNP*EEATVC
Trigger: ACAAACTGTTGCCTCTTCGCAGGGGTTACGTGGGGG...CAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCGCATGTGTGGACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp ATAGGGCTGCTATACAAACCTACCTTGGTCAGTACAACATATAAAGCCTCTAAACCCCCACGTAACCCCTaGGAAGAGGCAACAGTTTGT +
Preference number: 4 (lower is better)
Translates to: IGLLYKPTLVSTTYKASKPPRNP*EEATVC
Trigger: ACAAACTGTTGCCTCTTCGCAGGGGTTACGTGGGGG...TTTAGAGGCTTTATATGTTGTACTGACCAAGGTAGGTTTGTATAGCAGCCCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp GTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCGACTACTCATGATTTACTCTGCCAGCATGGCTaGCTTTATGTCCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: VKLVTCLLMSTHATTHDLLCQHG*LYVLLP
Trigger: GGGAAGAAGGACATAAAGGCAGCCATGCTGGCAGAG...TAAATCATGAGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp AGCGATGAATGCATTAGTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCCTCCTGGGAATCACATaGCAGCTCAAGGAAGCGATA +
Preference number: 4 (lower is better)
Translates to: SDECISKTGYLPTDVHTCLLGIT*QLKEAI
Trigger: TATCGCTTCCTTGAGCTGGCATGTGATTCCCAGGAG...GCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTACTAATGCATTCATCGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp TATAAAGCCTCTAAAAGGTTAGCAGTTTCTGAGTCAAACCCCAAAGGTTTGACAGGTGACCTGCGAGAGTaGTGTATCCAGGAGTCATCC +
Preference number: 4 (lower is better)
Translates to: YKASKRLAVSESNPKGLTGDLRE*CIQESS
Trigger: GGATGACTCCTGGATACAGCACTCTCGCAGGTCACC...TGTCAAACCTTTGGGGTTTGACTCAGAAACTGCTAACCTTTTAGAGGCTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp GCAATGAAGATGAGCGATGAATGCATTAGTAAAACTGGTTACTTGCCTACTGATTTGGAGGAGGTGACCTaGGAGAGTGCTGTATCCAGG +
Preference number: 4 (lower is better)
Translates to: AMKMSDECISKTGYLPTDLEEVT*ESAVSR
Trigger: CCTGGATACAGCACTCTCGCAGGTCACCTCCTCCAA...ATCAGTAGGCAAGTAACCAGTTTTACTAATGCATTCATCGCTCATCTTCATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp TTCAGACTTCATTCAACATTGGCATCTCCTTTTAGCAGAATACAAACCCTTTGGTTGGAGGAGGTGACCTaGGAGAGTGCTGTATCCAGG +
Preference number: 4 (lower is better)
Translates to: FRLHSTLASPFSRIQTLWLEEVT*ESAVSR
Trigger: CCTGGATACAGCACTCTCGCAGGTCACCTCCTCCAA...CCAAAGGGTTTGTATTCTGCTAAAAGGAGATGCCAATGTTGAATGAAGTCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp GCACGTCAAACTATGCACATACTAGAGTTTCAGACTTCATTCAACATTGGCATCCGAAGGAGTCACTGCTaGTGGGGAAAGGAGGTAATG +
Preference number: 4 (lower is better)
Translates to: ARQTMHILEFQTSFNIGIRRSHC*WGKEVM
Trigger: CATTACCTCCTTTCCCCAGCAGCAGTGACTCCTTCG...GATGCCAATGTTGAATGAAGTCTGAAACTCTAGTATGTGCATAGTTTGACGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp GGAGTAGGTAGTAGCATTAATGGTAGACAACAGAATTACTGTCATCCTAAACAGCTCCGAAGGAGTCACTaGTGCTGGGGAAAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: GVGSSINGRQQNYCHPKQLRRSH*CWGKEV
Trigger: TACCTCCTTTCCCCAGCAGCAGTGACTCCTTCGGAG...CTGTTTAGGATGACAGTAATTCTGTTGTCTACCATTAATGCTACTACCTACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp ATGTCCACACATGCGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGCTCCGAAGGAGTCACTaGTGCTGGGGAAAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: MSTHATTHDLLQRLSNMLLRRSH*CWGKEV
Trigger: TACCTCCTTTCCCCAGCAGCAGTGACTCCTTCGGAG...CAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCGCATGTGTGGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp GTTACTTGCCTACTGATGTCCACACATGCGACTACTCATGATTTACTGCAACGGAGACAATTGGGGCAGTaGAACTGTGGGACTATAATC +
Preference number: 4 (lower is better)
Translates to: VTCLLMSTHATTHDLLQRRQLGQ*NCGTII
Trigger: GATTATAGTCCCACAGTTGCACTGCCCCAATTGTCT...CCGTTGCAGTAAATCATGAGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp GTCAACTCTTCAAAGAGGCCTTCCCTCATCACCTTGACAAAAATAAAGCTTGCCGTGCTTACTTGTACCTaGCCTGTTCAATGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: VNSSKRPSLITLTKIKLAVLTCT*PVQCFP
Trigger: GGGAAAGCATTGAACAGGGCAGGTACAAGTAAGCAC...GGCAAGCTTTATTTTTGTCAAGGTGATGAGGGAAGGCCTCTTTGAAGAGTTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR CCA 90 bp TCACCAAGCCTTCAAAGCTTCTTCCTTCCCTACAGAGAGCATCCTATACCTTCCTTCAAATGCCATGTCTaGAGTAAACAACCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: SPSLQSFFLPYREHPIPSFKCHV*SKQPCP
Trigger: AGGACAGGGTTGTTTACTCCAGACATGGCATTTGAA...GGAAGGTATAGGATGCTCTCTGTAGGGAAGGAAGAAGCTTTGAAGGCTTGGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR CCA 90 bp TTTGTGGTTGAAAGCATAGGCTCTGGAGCTCAACAGCCTGGGTTCAAATTTCTGTTTCCTCGCAGAGTCTaGGGAAGTTTGCCAGTTTTT +
Preference number: 4 (lower is better)
Translates to: FVVESIGSGAQQPGFKFLFPRRV*GSLPVF
Trigger: AAAAACTGGCAAACTTCCCCAGACTCTGCGAGGAAA...CAGAAATTTGAACCCAGGCTGTTGAGCTCCAGAGCCTATGCTTTCAACCACAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR CCA 90 bp AATGTCTGCTCCAGTGGGGGCAGGACTTTATTGCTATTGTTCACCTCTGTATCATCTCGCTCACGAATGTaGTTAGCAACAATCCTTTCC +
Preference number: 4 (lower is better)
Translates to: NVCSSGGRTLLLLFTSVSSRSRM*LATILS
Trigger: GGAAAGGATTGTTGCTAACCACATTCGTGAGCGAGA...TGATACAGAGGTGAACAATAGCAATAAAGTCCTGCCCCCACTGGAGCAGACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR CCA 90 bp GTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCGACTACTCATGATTTACTGTCGACATCCTCCTaGGAATCACATGCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: VKLVTCLLMSTHATTHDLLSTSS*ESHASS
Trigger: TGAGCTGGCATGTGATTCCCAGGAGGATGTCGACAG...TAAATCATGAGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp ATAGGGCTGCTATACAAACCTACCTTGGTCAGTACAACATATAAAGCCTCTAAAAGTGTTGGCCTCCTTTaGGTTGTGGGGCTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: IGLLYKPTLVSTTYKASKSVGLL*VVGLGG
Trigger: TCCTCCAAGCCCCACAACCCAAAGGAGGCCAACACT...TTTAGAGGCTTTATATGTTGTACTGACCAAGGTAGGTTTGTATAGCAGCCCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp GCAATGAAGATGAGCGATGAATGCATTAGTAAAACTGGTTACTTGCCTACTGATAGGAGTCACTGCTGCTaGGGAAAGGAGGTAATGGGC +
Preference number: 4 (lower is better)
Translates to: AMKMSDECISKTGYLPTDRSHCC*GKEVMG
Trigger: GCCCATTACCTCCTTTCCCCAGCAGCAGTGACTCCT...ATCAGTAGGCAAGTAACCAGTTTTACTAATGCATTCATCGCTCATCTTCATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp GGAGTAGGTAGTAGCATTAATGGTAGACAACAGAATTACTGTCATCCTAAACAGAGGAGTCACTGCTGCTaGGGAAAGGAGGTAATGGGC +
Preference number: 4 (lower is better)
Translates to: GVGSSINGRQQNYCHPKQRSHCC*GKEVMG
Trigger: GCCCATTACCTCCTTTCCCCAGCAGCAGTGACTCCT...CTGTTTAGGATGACAGTAATTCTGTTGTCTACCATTAATGCTACTACCTACTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp TTCAGACTTCATTCAACATTGGCATCTCCTTTTAGCAGAATACAAACCCTTTGGCCTAGATGGAACTTGTaGAGGGGCTCCGAAGGAGTC +
Preference number: 4 (lower is better)
Translates to: FRLHSTLASPFSRIQTLWPRWNL*RGSEGV
Trigger: GACTCCTTCGGAGCCCCTCCACAAGTTCCATCTAGG...CCAAAGGGTTTGTATTCTGCTAAAAGGAGATGCCAATGTTGAATGAAGTCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp CTATACAAACCTACCTTGGTCAGTACAACATATAAAGCCTCTAAAAGGTTAGCACCTCGTAGGCCTAGATaGAACTTGTGGAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LYKPTLVSTTYKASKRLAPRRPR*NLWRGS
Trigger: GGAGCCCCTCCACAAGTTCCATCTAGGCCTACGAGG...TGCTAACCTTTTAGAGGCTTTATATGTTGTACTGACCAAGGTAGGTTTGTATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp GCACGTCAAACTATGCACATACTAGAGTTTCAGACTTCATTCAACATTGGCATCCCCCAGTTTGGGGTTTaGGGTGAGATACGAGAGGAT +
Preference number: 4 (lower is better)
Translates to: ARQTMHILEFQTSFNIGIPQFGV*GEIRED
Trigger: ATCCTCTCGTATCTCACCCCAAACCCCAAACTGGGG...GATGCCAATGTTGAATGAAGTCTGAAACTCTAGTATGTGCATAGTTTGACGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
3UTR CAA 72 bp TGGCCTTGCTGCTCCTCTAAGACACTGAGCTTGGTTTaGCACTTGCTATCTTCTGCCAAGAATACTCTTCTT +
Preference number: 4 (lower is better)
Translates to: WPCCSSKTLSLV*HLLSSAKNTLL
Trigger: AAGAAGAGTATTCTTGGCAGAAGATAGCAAGTGCAAAACCAAGCTCAGTGTCTTAGAGGAGCAGCAAGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR TCA 90 bp CTTCCAGATCCTTTACTCCCTCCCTTCTTTGAAGAGCCTGCTCTAATGTCAACTATCATTTCTCTGATCTaGTACTCGATATCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: LPDPLLPPFFEEPALMSTIISLI*YSISGG
Trigger: GCCACCAGATATCGAGTATCAGATCAGAGAAATGAT...AGTTGACATTAGAGCAGGCTCTTCAAAGAAGGGAGGGAGTAAAGGATCTGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR TCA 90 bp AGAGGACGACATTTTGGTGCAAGTCCTCAATCCTGTATTCCTGAAACTCTGTTACCTGTAGTTTGTTCCTaGAGTTTGGTAGGGTATCCC +
Preference number: 4 (lower is better)
Translates to: RGRHFGASPQSCIPETLLPVVCS*SLVGYP
Trigger: GGGATACCCTACCAAACTTCAGGAACAAACTACAGG...TAACAGAGTTTCAGGAATACAGGATTGAGGACTTGCACCAAAATGTCGTCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR TCA 90 bp AATCTAGATATACAGGAGGAAGCAGCAAGTGGAGAGGTCCACTCAGTGGCAGAGTTGGGTCTTCTGGTTTaGAATTTTTGTAGGCTTCTA +
Preference number: 4 (lower is better)
Translates to: NLDIQEEAASGEVHSVAELGLLV*NFCRLL
Trigger: TAGAAGCCTACAAAAATTTCAAACCAGAAGACCCAA...CTCTGCCACTGAGTGGACCTCTCCACTTGCTGCTTCCTCCTGTATATCTAGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR TCA 90 bp GCATCTAGTTTAACTTCCATTTGGAGGGCACAAAGCATATTGTGGGAGGTTCATTCCAGGGTATCTACTTaGTCCCCTGACCCTTCAATT +
Preference number: 4 (lower is better)
Translates to: ASSLTSIWRAQSILWEVHSRVST*SPDPSI
Trigger: AATTGAAGGGTCAGGGGATCAAGTAGATACCCTGGA...ATGAACCTCCCACAATATGCTTTGTGCCCTCCAAATGGAAGTTAAACTAGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR TCA 90 bp AGAGGACGACATTTTGGTGCAAGTCCTCAATCCTGTATTCCTGAAACTCTGTTAGATTTTAGCACCACCTaGGAGTTCCAGGGTATCTAC +
Preference number: 4 (lower is better)
Translates to: RGRHFGASPQSCIPETLLDFSTT*EFQGIY
Trigger: GTAGATACCCTGGAACTCTCAGGTGGTGCTAAAATC...TAACAGAGTTTCAGGAATACAGGATTGAGGACTTGCACCAAAATGTCGTCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR TCA 90 bp AGAGCTCACCAAGCCTTCAAAGCTTCTTCCTTCCCTACAGAGAGCATCCTATACCTTCATGGTTGGTGTTaGTGTAAGAGACTTGAATGT +
Preference number: 4 (lower is better)
Translates to: RAHQAFKASSFPTESILYLHGWC*CKRLEC
Trigger: ACATTCAAGTCTCTTACATCAACACCAACCATGAAG...GTATAGGATGCTCTCTGTAGGGAAGGAAGAAGCTTTGAAGGCTTGGTGAGCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR TCA 90 bp ATGTCCACACATGCGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGACACGGTGGCTGTGCTaGTGTCCCCAATTATCCCAA +
Preference number: 4 (lower is better)
Translates to: MSTHATTHDLLQRLSNMLTRWLC*CPQLSQ
Trigger: TTGGGATAATTGGGGACATCAGCACAGCCACCGTGT...CAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCGCATGTGTGGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp AGAGGACGACATTTTGGTGCAAGTCCTCAATCCTGTATTCCTGAAACTCTGTTACCCTTGCGAATCACCTaGTTTCCAACTGTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: RGRHFGASPQSCIPETLLPLRIT*FPTVVF
Trigger: GAAAACCACAGTTGGAAATCAGGTGATTCGCAAGGG...TAACAGAGTTTCAGGAATACAGGATTGAGGACTTGCACCAAAATGTCGTCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR GCA 90 bp GAATTACGTTTAATGAGCTACCTGGTAGATAGCCTAGAAAACTTGTCCAAAGCAGTCGTCTTGTTACAATaGCCGACCCTCGAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: ELRLMSYLVDSLENLSKAVVLLQ*PTLEGE
Trigger: TTCTCCCTCGAGGGTCGGGCATTGTAACAAGACGAC...TGCTTTGGACAAGTTTTCTAGGCTATCTACCAGGTAGCTCATTAAACGTAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp TTCAGACTTCATTCAACATTGGCATCTCCTTTTAGCAGAATACAAACCCTTTGGGTCGTCTTGTTACAATaGCCGACCCTCGAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: FRLHSTLASPFSRIQTLWVVLLQ*PTLEGE
Trigger: TTCTCCCTCGAGGGTCGGGCATTGTAACAAGACGAC...CCAAAGGGTTTGTATTCTGCTAAAAGGAGATGCCAATGTTGAATGAAGTCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp TGGGCTTATTTTCAGGACTCACAGAGCCAGACTAATGCCACACTCCAACAGCAGAAACTCGGCATATTCTaGTTTAGAAGTAACAAGCTG +
Preference number: 4 (lower is better)
Translates to: WAYFQDSQSQTNATLQQQKLGIF*FRSNKL
Trigger: CAGCTTGTTACTTCTAAAGCAGAATATGCCGAGTTT...CTGCTGTTGGAGTGTGGCATTAGTCTGGCTCTGTGAGTCCTGAAAATAAGCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR GCA 90 bp CTAACACCCAGGAACATGTCAATGCTGAGATGCCTGGAATTCATCTTCATAAGTCACGCGATCTGTTTCTaGTTCAATCTCAAGGCGAAC +
Preference number: 4 (lower is better)
Translates to: LTPRNMSMLRCLEFIFISHAICF*FNLKAN
Trigger: GTTCGCCTTGAGATTGAAGCAGAAACAGATCGCGTG...ACTTATGAAGATGAATTCCAGGCATCTCAGCATTGACATGTTCCTGGGTGTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR GCA 90 bp GAATTCATCTTCATAAGTCCTCTGTGGGATGAGGTTGGCTTGGACAACTCCAGGTGGGTATGGAGGAAATaGCTTTATTCATTCCAGTCA +
Preference number: 4 (lower is better)
Translates to: EFIFISPLWDEVGLDNSRWVWRK*LYSFQS
Trigger: TGACTGGAATGAATAAAGGCATTTCCTCCATACCCA...CCTGGAGTTGTCCAAGCCAACCTCATCCCACAGAGGACTTATGAAGATGAATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR GCA 90 bp CAAAACACAAAACCACATTTAGCACAAAGCCAAACCCTGAAGTATATAATCCGTCCCCCACGTAACCCCTaGGAAGAGGCAACAGTTTGT +
Preference number: 4 (lower is better)
Translates to: QNTKPHLAQSQTLKYIIRPPRNP*EEATVC
Trigger: ACAAACTGTTGCCTCTTCGCAGGGGTTACGTGGGGG...ACGGATTATATACTTCAGGGTTTGGCTTTGTGCTAAATGTGGTTTTGTGTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp AGAGGACGACATTTTGGTGCAAGTCCTCAATCCTGTATTCCTGAAACTCTGTTACCTCTGCTGAGCATTTaGGAAGCCAATGAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: RGRHFGASPQSCIPETLLPLLSI*EANEVF
Trigger: GAAGACTTCATTGGCTTCGCAAATGCTCAGCAGAGG...TAACAGAGTTTCAGGAATACAGGATTGAGGACTTGCACCAAAATGTCGTCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR GCA 90 bp CTATACAAACCTACCTTGGTCAGTACAACATATAAAGCCTCTAAAAGGTTAGCAGGTGACCTGCGAGAGTaGTGTATCCAGGAGTCATCC +
Preference number: 4 (lower is better)
Translates to: LYKPTLVSTTYKASKRLAGDLRE*CIQESS
Trigger: GGATGACTCCTGGATACAGCACTCTCGCAGGTCACC...TGCTAACCTTTTAGAGGCTTTATATGTTGTACTGACCAAGGTAGGTTTGTATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp TATAAAGCCTCTAAAAGGTTAGCAGTTTCTGAGTCAAACCCCAAAGGTTTGACACGAAGGAGTCACTGCTaGTGGGGAAAGGAGGTAATG +
Preference number: 4 (lower is better)
Translates to: YKASKRLAVSESNPKGLTRRSHC*WGKEVM
Trigger: CATTACCTCCTTTCCCCAGCAGCAGTGACTCCTTCG...TGTCAAACCTTTGGGGTTTGACTCAGAAACTGCTAACCTTTTAGAGGCTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp CTTCCAGATCCTTTACTCCCTCCCTTCTTTGAAGAGCCTGCTCTAATGTCAACTCTGGCAAAAAGCATATaGTCCAAAGGTTTGTGTGGA +
Preference number: 4 (lower is better)
Translates to: LPDPLLPPFFEEPALMSTLAKSI*SKGLCG
Trigger: TCCACACAAACCTTTGGAGCATATGCTTTTTGCCAG...AGTTGACATTAGAGCAGGCTCTTCAAAGAAGGGAGGGAGTAAAGGATCTGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR CCA 90 bp AGCGATGAATGCATTAGTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCTCTCTAGAACATCCCTaGCATCCGTTCCTTCATCCA +
Preference number: 4 (lower is better)
Translates to: SDECISKTGYLPTDVHTCSLEHP*HPFLHP
Trigger: TGGATGAAGGAACGGATGCCAGGGATGTTCTAGAGA...GCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTACTAATGCATTCATCGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp CTTCCAGATCCTTTACTCCCTCCCTTCTTTGAAGAGCCTGCTCTAATGTCAACTCTACTTCATGTTCTATaGAGAGCAACTGTCCCTGTA +
Preference number: 4 (lower is better)
Translates to: LPDPLLPPFFEEPALMSTLLHVL*RATVPV
Trigger: TACAGGGACAGTTGCTCTCCATAGAACATGAAGTAG...AGTTGACATTAGAGCAGGCTCTTCAAAGAAGGGAGGGAGTAAAGGATCTGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR CCA 90 bp AGCTTCTTCCTTCCCTACAGAGAGCATCCTATACCTTCCAATGGGCTTATTTTCTCTCGCTCACGAATGTaGTTAGCAACAATCCTTTCC +
Preference number: 4 (lower is better)
Translates to: SFFLPYREHPIPSNGLIFSRSRM*LATILS
Trigger: GGAAAGGATTGTTGCTAACCACATTCGTGAGCGAGA...GAAAATAAGCCCATTGGAAGGTATAGGATGCTCTCTGTAGGGAAGGAAGAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR CCA 90 bp TCCAATGGGCTTATTTTCAGGACTCACAGAGCCAGACTAATGCCACACTCCAACATCAATAGCAATACCTaGTCCTTTGTCTTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: SNGLIFRTHRARLMPHSNINSNT*SFVFPS
Trigger: AGAAGGGAAGACAAAGGACCAGGTATTGCTATTGAT...GTTGGAGTGTGGCATTAGTCTGGCTCTGTGAGTCCTGAAAATAAGCCCATTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR CCA 90 bp GTTACTTGCCTACTGATGTCCACACATGCGACTACTCATGATTTACTGCAACGGCCTGATTTCCAACTGTaGTTTTCTTGTGAACCTGAC +
Preference number: 4 (lower is better)
Translates to: VTCLLMSTHATTHDLLQRPDFQL*FSCEPD
Trigger: GTCAGGTTCACAAGAAAACCACAGTTGGAAATCAGG...CCGTTGCAGTAAATCATGAGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp TTCAGACTTCATTCAACATTGGCATCTCCTTTTAGCAGAATACAAACCCTTTGGCTGTCGACATCCTCCTaGGAATCACATGCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: FRLHSTLASPFSRIQTLWLSTSS*ESHASS
Trigger: TGAGCTGGCATGTGATTCCCAGGAGGATGTCGACAG...CCAAAGGGTTTGTATTCTGCTAAAAGGAGATGCCAATGTTGAATGAAGTCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp CACTATCTCATATCTGAAGAATTACGTTTAATGAGCTACCTGGTAGATAGCCTAAGGAGTCACTGCTGCTaGGGAAAGGAGGTAATGGGC +
Preference number: 4 (lower is better)
Translates to: HYLISEELRLMSYLVDSLRSHCC*GKEVMG
Trigger: GCCCATTACCTCCTTTCCCCAGCAGCAGTGACTCCT...TAGGCTATCTACCAGGTAGCTCATTAAACGTAATTCTTCAGATATGAGATAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp CTATACAAACCTACCTTGGTCAGTACAACATATAAAGCCTCTAAAAGGTTAGCACCTAGATGGAACTTGTaGAGGGGCTCCGAAGGAGTC +
Preference number: 4 (lower is better)
Translates to: LYKPTLVSTTYKASKRLAPRWNL*RGSEGV
Trigger: GACTCCTTCGGAGCCCCTCCACAAGTTCCATCTAGG...TGCTAACCTTTTAGAGGCTTTATATGTTGTACTGACCAAGGTAGGTTTGTATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp CACTATCTCATATCTGAAGAATTACGTTTAATGAGCTACCTGGTAGATAGCCTACCTAGATGGAACTTGTaGAGGGGCTCCGAAGGAGTC +
Preference number: 4 (lower is better)
Translates to: HYLISEELRLMSYLVDSLPRWNL*RGSEGV
Trigger: GACTCCTTCGGAGCCCCTCCACAAGTTCCATCTAGG...TAGGCTATCTACCAGGTAGCTCATTAAACGTAATTCTTCAGATATGAGATAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp ATAGGCAATTATGGAGTAGGTAGTAGCATTAATGGTAGACAACAGAATTACTGTCCTCGTAGGCCTAGATaGAACTTGTGGAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: IGNYGVGSSINGRQQNYCPRRPR*NLWRGS
Trigger: GGAGCCCCTCCACAAGTTCCATCTAGGCCTACGAGG...ACAGTAATTCTGTTGTCTACCATTAATGCTACTACCTACTCCATAATTGCCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp CTGGGATTCTTGCCTTTATTTGTGGTTGAAAGCATAGGCTCTGGAGCTCAACAGAACTCCAGGCATCTCTaGGATTCTTGCCTTTATTTG +
Preference number: 4 (lower is better)
Translates to: LGFLPLFVVESIGSGAQQNSRHL*DSCLYL
Trigger: CAAATAAAGGCAAGAATCCCAGAGATGCCTGGAGTT...CTGTTGAGCTCCAGAGCCTATGCTTTCAACCACAAATAAAGGCAAGAATCCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR CCA 90 bp TTCAGACTTCATTCAACATTGGCATCTCCTTTTAGCAGAATACAAACCCTTTGGCCCCAGTTTGGGGTTTaGGGTGAGATACGAGAGGAT +
Preference number: 4 (lower is better)
Translates to: FRLHSTLASPFSRIQTLWPQFGV*GEIRED
Trigger: ATCCTCTCGTATCTCACCCCAAACCCCAAACTGGGG...CCAAAGGGTTTGTATTCTGCTAAAAGGAGATGCCAATGTTGAATGAAGTCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp AGAGGACGACATTTTGGTGCAAGTCCTCAATCCTGTATTCCTGAAACTCTGTTAGAGAGGACGACATTTTaGTGCAAGTCCTCAATCCTG +
Preference number: 4 (lower is better)
Translates to: RGRHFGASPQSCIPETLLERTTF*CKSSIL
Trigger: CAGGATTGAGGACTTGCACCAAAATGTCGTCCTCTC...TAACAGAGTTTCAGGAATACAGGATTGAGGACTTGCACCAAAATGTCGTCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR CCA 90 bp GTCAACTCTTCAAAGAGGCCTTCCCTCATCACCTTGACAAAAATAAAGCTTGCCGTGCTTCTGTACTCCTaGCTATTGACAGGAAAGCAT +
Preference number: 4 (lower is better)
Translates to: VNSSKRPSLITLTKIKLAVLLYS*LLTGKH
Trigger: ATGCTTTCCTGTCAATAGCCAGGAGTACAGAAGCAC...GGCAAGCTTTATTTTTGTCAAGGTGATGAGGGAAGGCCTCTTTGAAGAGTTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR CAA 72 bp AATGTCAACTCTTCAAAGAGGCCTTCCCTCATCACCTaGACAAAAATAAAGCTTGCCTGCCCCTTACTCTCA +
Preference number: 4 (lower is better)
Translates to: NVNSSKRPSLIT*TKIKLACPLLS
Trigger: TGAGAGTAAGGGGCAGGCAAGCTTTATTTTTGTCAAGGTGATGAGGGAAGGCCTCTTTGAAGAGTTGACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR TCA 90 bp AAAATTCCAGTTGGCTTCTGGCTGTTTCCTACATGTGAATCATCTGGTCCTTGGATGGTTCTCAGACCTTaGGGATCAACTTCTTTAGCT +
Preference number: 4 (lower is better)
Translates to: KIPVGFWLFPTCESSGPWMVLRP*GSTSLA
Trigger: AGCTAAAGAAGTTGATCCTCAAGGTCTGAGAACCAT...CCAAGGACCAGATGATTCACATGTAGGAAACAGCCAGAAGCCAACTGGAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp GTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCGACTACTCATGATTTATGGTTGGTAAGTTGCTaGTTAAGGACCTTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: VKLVTCLLMSTHATTHDLWLVSC*LRTFCR
Trigger: CCTGCAGAAGGTCCTTAATCAGCAACTTACCAACCA...TAAATCATGAGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp AATGCATTAGTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCGACTACTCCTGTAGTTTGTTCCTaGAGTTTGGTAGGGTATCCC +
Preference number: 4 (lower is better)
Translates to: NALVKLVTCLLMSTHATTPVVCS*SLVGYP
Trigger: GGGATACCCTACCAAACTTCAGGAACAAACTACAGG...AGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTACTAATGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp GCACGTCAAACTATGCACATACTAGAGTTTCAGACTTCATTCAACATTGGCATCGATTTTAGCACCACCTaGGAGTTCCAGGGTATCTAC +
Preference number: 4 (lower is better)
Translates to: ARQTMHILEFQTSFNIGIDFSTT*EFQGIY
Trigger: GTAGATACCCTGGAACTCTCAGGTGGTGCTAAAATC...GATGCCAATGTTGAATGAAGTCTGAAACTCTAGTATGTGCATAGTTTGACGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp GCAATGAAGATGAGCGATGAATGCATTAGTAAAACTGGTTACTTGCCTACTGATGCCATGGTAGGCAAATaGTCCCCAAAGTATAGGGCT +
Preference number: 4 (lower is better)
Translates to: AMKMSDECISKTGYLPTDAMVGK*SPKYRA
Trigger: AGCCCTATACTTTGGGGATCATTTGCCTACCATGGC...ATCAGTAGGCAAGTAACCAGTTTTACTAATGCATTCATCGCTCATCTTCATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp AGCGATGAATGCATTAGTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCGATATACAGTTACACTaGGCCTGTTTCAAGGGTAGG +
Preference number: 4 (lower is better)
Translates to: SDECISKTGYLPTDVHTCDIQLH*ACFKGR
Trigger: CCTACCCTTGAAACAGGCTCAGTGTAACTGTATATC...GCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTACTAATGCATTCATCGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp GGAGTAGGTAGTAGCATTAATGGTAGACAACAGAATTACTGTCATCCTAAACAGGTTTGGGGTTTGGGGTaGGATACGAGAGGATTTAGG +
Preference number: 4 (lower is better)
Translates to: GVGSSINGRQQNYCHPKQVWGLG*DTRGFR
Trigger: CCTAAATCCTCTCGTATCTCACCCCAAACCCCAAAC...CTGTTTAGGATGACAGTAATTCTGTTGTCTACCATTAATGCTACTACCTACTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp AAAATTCCAGTTGGCTTCTGGCTGTTTCCTACATGTGAATCATCTGGTCCTTGGCACAATAGGTACATGTaGCCTTCAAGAACGATACAG +
Preference number: 4 (lower is better)
Translates to: KIPVGFWLFPTCESSGPWHNRYM*PSRTIQ
Trigger: CTGTATCGTTCTTGAAGGTCACATGTACCTATTGTG...CCAAGGACCAGATGATTCACATGTAGGAAACAGCCAGAAGCCAACTGGAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp CTATACAAACCTACCTTGGTCAGTACAACATATAAAGCCTCTAAAAGGTTAGCAGTCGTCTTGTTACAATaGCCGACCCTCGAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: LYKPTLVSTTYKASKRLAVVLLQ*PTLEGE
Trigger: TTCTCCCTCGAGGGTCGGGCATTGTAACAAGACGAC...TGCTAACCTTTTAGAGGCTTTATATGTTGTACTGACCAAGGTAGGTTTGTATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp GTTACTTGCCTACTGATGTCCACACATGCGACTACTCATGATTTACTGCAACGGTCCCTCGTGATGAACTaGATAATCATTTCTCTGATC +
Preference number: 4 (lower is better)
Translates to: VTCLLMSTHATTHDLLQRSLVMN*IIISLI
Trigger: GATCAGAGAAATGATTATGCAGTTCATCACGAGGGA...CCGTTGCAGTAAATCATGAGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp ATACCTTCCAATGGGCTTATTTTCAGGACTCACAGAGCCAGACTAATGCCACACTCCCTCGTGATGAACTaGATAATCATTTCTCTGATC +
Preference number: 4 (lower is better)
Translates to: IPSNGLIFRTHRARLMPHSLVMN*IIISLI
Trigger: GATCAGAGAAATGATTATGCAGTTCATCACGAGGGA...GTGTGGCATTAGTCTGGCTCTGTGAGTCCTGAAAATAAGCCCATTGGAAGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR GCA 90 bp AGCGATGAATGCATTAGTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCGAAAAACTTCCTCTCTaGCAGCATGGCTGCCTTTAT +
Preference number: 4 (lower is better)
Translates to: SDECISKTGYLPTDVHTCEKLPL*QHGCLY
Trigger: ATAAAGGCAGCCATGCTGGCAGAGAGGAAGTTTTTC...GCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTACTAATGCATTCATCGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp AGAGGACGACATTTTGGTGCAAGTCCTCAATCCTGTATTCCTGAAACTCTGTTAGAAAAACTTCCTCTCTaGCAGCATGGCTGCCTTTAT +
Preference number: 4 (lower is better)
Translates to: RGRHFGASPQSCIPETLLEKLPL*QHGCLY
Trigger: ATAAAGGCAGCCATGCTGGCAGAGAGGAAGTTTTTC...TAACAGAGTTTCAGGAATACAGGATTGAGGACTTGCACCAAAATGTCGTCCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR GCA 90 bp AATGCATTAGTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCGACTACTTCTTGTGAACCTGACTaGTCCTCTGCTGAGCATTTG +
Preference number: 4 (lower is better)
Translates to: NALVKLVTCLLMSTHATTSCEPD*SSAEHL
Trigger: CAAATGCTCAGCAGAGGAGCAGTCAGGTTCACAAGA...AGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTACTAATGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp GCAATGAAGATGAGCGATGAATGCATTAGTAAAACTGGTTACTTGCCTACTGATCTCCTGGGAATCACATaGCAGCTCAAGGAAGCGATA +
Preference number: 4 (lower is better)
Translates to: AMKMSDECISKTGYLPTDLLGIT*QLKEAI
Trigger: TATCGCTTCCTTGAGCTGGCATGTGATTCCCAGGAG...ATCAGTAGGCAAGTAACCAGTTTTACTAATGCATTCATCGCTCATCTTCATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp CAGAGAGCATCCTATACCTTCCAATGGGCTTATTTTCAGGACTCACAGAGCCAGATGTCAATGCTGAGATaGCTGGAATTCATCTTCATA +
Preference number: 4 (lower is better)
Translates to: QRASYTFQWAYFQDSQSQMSMLR*LEFIFI
Trigger: TATGAAGATGAATTCCAGGCATCTCAGCATTGACAT...CTGGCTCTGTGAGTCCTGAAAATAAGCCCATTGGAAGGTATAGGATGCTCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR GCA 90 bp TTCAGACTTCATTCAACATTGGCATCTCCTTTTAGCAGAATACAAACCCTTTGGGCCTGGTGTGCATGCTaGACGTCAAACTATGCACAT +
Preference number: 4 (lower is better)
Translates to: FRLHSTLASPFSRIQTLWAWCAC*TSNYAH
Trigger: ATGTGCATAGTTTGACGTGCAGCATGCACACCAGGC...CCAAAGGGTTTGTATTCTGCTAAAAGGAGATGCCAATGTTGAATGAAGTCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp TATAGGATGACAAGTATAGCATGCAATGGCATAAAGAGGTCTATGTGTGAGTTACCCTTGTTTAATGTCTaGTCCAGTGGGGGCAGGACT +
Preference number: 4 (lower is better)
Translates to: YRMTSIACNGIKRSMCELPLFNV*SSGGRT
Trigger: AGTCCTGCCCCCACTGGAGCAGACATTAAACAAGGG...TAACTCACACATAGACCTCTTTATGCCATTGCATGCTATACTTGTCATCCTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR GCA 90 bp TATTCACTCCCTTGTTTAATGTCTGCTCCAGTGGGGGCAGGACTTTATTGCTATGACAAAAATAAAGCTTaGCTGCCCCTTACTCTCACT +
Preference number: 4 (lower is better)
Translates to: YSLPCLMSAPVGAGLYCYDKNKA*LPLTLT
Trigger: AGTGAGAGTAAGGGGCAGGCAAGCTTTATTTTTGTC...ATAGCAATAAAGTCCTGCCCCCACTGGAGCAGACATTAAACAAGGGAGTGAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR CCA 90 bp GGAGTAGGTAGTAGCATTAATGGTAGACAACAGAATTACTGTCATCCTAAACAGCTGATACTCGATATCTaGTGGCTGATCTCCCACAGG +
Preference number: 4 (lower is better)
Translates to: GVGSSINGRQQNYCHPKQLILDI*WLISHR
Trigger: CCTGTGGGAGATCAGCCACCAGATATCGAGTATCAG...CTGTTTAGGATGACAGTAATTCTGTTGTCTACCATTAATGCTACTACCTACTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp ATAGGGCTGCTATACAAACCTACCTTGGTCAGTACAACATATAAAGCCTCTAAACTGATACTCGATATCTaGTGGCTGATCTCCCACAGG +
Preference number: 4 (lower is better)
Translates to: IGLLYKPTLVSTTYKASKLILDI*WLISHR
Trigger: CCTGTGGGAGATCAGCCACCAGATATCGAGTATCAG...TTTAGAGGCTTTATATGTTGTACTGACCAAGGTAGGTTTGTATAGCAGCCCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp GAATTACGTTTAATGAGCTACCTGGTAGATAGCCTAGAAAACTTGTCCAAAGCACTGATACTCGATATCTaGTGGCTGATCTCCCACAGG +
Preference number: 4 (lower is better)
Translates to: ELRLMSYLVDSLENLSKALILDI*WLISHR
Trigger: CCTGTGGGAGATCAGCCACCAGATATCGAGTATCAG...TGCTTTGGACAAGTTTTCTAGGCTATCTACCAGGTAGCTCATTAAACGTAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp TATAAAGCCTCTAAAAGGTTAGCAGTTTCTGAGTCAAACCCCAAAGGTTTGACATCCTCTCTGCCAGCATaGCTGCCTTTATGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: YKASKRLAVSESNPKGLTSSLPA*LPLCPS
Trigger: AGAAGGACATAAAGGCAGCCATGCTGGCAGAGAGGA...TGTCAAACCTTTGGGGTTTGACTCAGAAACTGCTAACCTTTTAGAGGCTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp AAAATTCCAGTTGGCTTCTGGCTGTTTCCTACATGTGAATCATCTGGTCCTTGGCCAATTGTGGGTCCATaGAAAAGTTTTCTGCTTGTC +
Preference number: 4 (lower is better)
Translates to: KIPVGFWLFPTCESSGPWPIVGP*KSFLLV
Trigger: GACAAGCAGAAAACTTTTCCATGGACCCACAATTGG...CCAAGGACCAGATGATTCACATGTAGGAAACAGCCAGAAGCCAACTGGAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp GAAAAGAAATATGTATGGCTTAGGTCTAAGCCCACTATCTCATATCTGAAGAATAGTGTTGGCCTCCTTTaGGTTGTGGGGCTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: EKKYVWLRSKPTISYLKNSVGLL*VVGLGG
Trigger: TCCTCCAAGCCCCACAACCCAAAGGAGGCCAACACT...ATTCTTCAGATATGAGATAGTGGGCTTAGACCTAAGCCATACATATTTCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp CTGGGATTCTTGCCTTTATTTGTGGTTGAAAGCATAGGCTCTGGAGCTCAACAGTCCTATACCTTCCAATaGGCTTATTTTCAGGACTCA +
Preference number: 4 (lower is better)
Translates to: LGFLPLFVVESIGSGAQQSYTFQ*AYFQDS
Trigger: TGAGTCCTGAAAATAAGCCCATTGGAAGGTATAGGA...CTGTTGAGCTCCAGAGCCTATGCTTTCAACCACAAATAAAGGCAAGAATCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR CCA 90 bp GTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCGACTACTCATGATTTAACAAAGGTAGACAATTaGGGCAGTGCAACTGTGGGA +
Preference number: 4 (lower is better)
Translates to: VKLVTCLLMSTHATTHDLTKVDN*GSATVG
Trigger: TCCCACAGTTGCACTGCCCCAATTGTCTACCTTTGT...TAAATCATGAGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp CACTATCTCATATCTGAAGAATTACGTTTAATGAGCTACCTGGTAGATAGCCTATCCCATCTTAAGGCCTaGTGTGCATGCTGCACGTCA +
Preference number: 4 (lower is better)
Translates to: HYLISEELRLMSYLVDSLSHLKA*CACCTS
Trigger: TGACGTGCAGCATGCACACCAGGCCTTAAGATGGGA...TAGGCTATCTACCAGGTAGCTCATTAAACGTAATTCTTCAGATATGAGATAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
3UTR CAA 72 bp TCAATACCCTTTTCTGGAGTGACCTGGATAGGGACTTaGAAATACTGCAACTGTAAAAGTGTGAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: SIPFSGVTWIGT*KYCNCKSVSSA
Trigger: AGCAGAGCTCACACTTTTACAGTTGCAGTATTTCAAAGTCCCTATCCAGGTCACTCCAGAAAAGGGTATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp AGAGGACGACATTTTGGTGCAAGTCCTCAATCCTGTATTCCTGAAACTCTGTTAATGGTTCTCAGACCTTaGGGATCAACTTCTTTAGCT +
Preference number: 4 (lower is better)
Translates to: RGRHFGASPQSCIPETLLMVLRP*GSTSLA
Trigger: AGCTAAAGAAGTTGATCCTCAAGGTCTGAGAACCAT...TAACAGAGTTTCAGGAATACAGGATTGAGGACTTGCACCAAAATGTCGTCCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR TCA 90 bp ATGTCCACACATGCGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGTGGTTGGTAAGTTGCTaGTTAAGGACCTTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: MSTHATTHDLLQRLSNMLWLVSC*LRTFCR
Trigger: CCTGCAGAAGGTCCTTAATCAGCAACTTACCAACCA...CAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCGCATGTGTGGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp ATAGGGCTGCTATACAAACCTACCTTGGTCAGTACAACATATAAAGCCTCTAAACCTGTAGTTTGTTCCTaGAGTTTGGTAGGGTATCCC +
Preference number: 4 (lower is better)
Translates to: IGLLYKPTLVSTTYKASKPVVCS*SLVGYP
Trigger: GGGATACCCTACCAAACTTCAGGAACAAACTACAGG...TTTAGAGGCTTTATATGTTGTACTGACCAAGGTAGGTTTGTATAGCAGCCCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp GCAATGAAGATGAGCGATGAATGCATTAGTAAAACTGGTTACTTGCCTACTGATTCCAGGGTATCTACTTaGTCCCCTGACCCTTCAATT +
Preference number: 4 (lower is better)
Translates to: AMKMSDECISKTGYLPTDSRVST*SPDPSI
Trigger: AATTGAAGGGTCAGGGGATCAAGTAGATACCCTGGA...ATCAGTAGGCAAGTAACCAGTTTTACTAATGCATTCATCGCTCATCTTCATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp TATAAAGCCTCTAAAAGGTTAGCAGTTTCTGAGTCAAACCCCAAAGGTTTGACATCCAGGGTATCTACTTaGTCCCCTGACCCTTCAATT +
Preference number: 4 (lower is better)
Translates to: YKASKRLAVSESNPKGLTSRVST*SPDPSI
Trigger: AATTGAAGGGTCAGGGGATCAAGTAGATACCCTGGA...TGTCAAACCTTTGGGGTTTGACTCAGAAACTGCTAACCTTTTAGAGGCTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp GCAATGAAGATGAGCGATGAATGCATTAGTAAAACTGGTTACTTGCCTACTGATGATTTTAGCACCACCTaGGAGTTCCAGGGTATCTAC +
Preference number: 4 (lower is better)
Translates to: AMKMSDECISKTGYLPTDDFSTT*EFQGIY
Trigger: GTAGATACCCTGGAACTCTCAGGTGGTGCTAAAATC...ATCAGTAGGCAAGTAACCAGTTTTACTAATGCATTCATCGCTCATCTTCATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp CACATGCGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGCTTTCGCAATCACAATTTGCCTTaGAGGCGGAAGATTGGTTCC +
Preference number: 4 (lower is better)
Translates to: HMRLLMIYCNGYQICCFRNHNLP*RRKIGS
Trigger: GGAACCAATCTTCCGCCTTCAAGGCAAATTGTGATT...GCGAAAGCAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCGCATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355305.9
CDS-3UTR TCA 90 bp GAAAAGAAATATGTATGGCTTAGGTCTAAGCCCACTATCTCATATCTGAAGAATACACGGTGGCTGTGCTaGTGTCCCCAATTATCCCAA +
Preference number: 4 (lower is better)
Translates to: EKKYVWLRSKPTISYLKNTRWLC*CPQLSQ
Trigger: TTGGGATAATTGGGGACATCAGCACAGCCACCGTGT...ATTCTTCAGATATGAGATAGTGGGCTTAGACCTAAGCCATACATATTTCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp GCAATGAAGATGAGCGATGAATGCATTAGTAAAACTGGTTACTTGCCTACTGATTGGTTACTTGCCTACTaGTGTCCACACATGCGACTA +
Preference number: 4 (lower is better)
Translates to: AMKMSDECISKTGYLPTDWLLAY*CPHMRL
Trigger: TAGTCGCATGTGTGGACATCAGTAGGCAAGTAACCA...ATCAGTAGGCAAGTAACCAGTTTTACTAATGCATTCATCGCTCATCTTCATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp CACTATCTCATATCTGAAGAATTACGTTTAATGAGCTACCTGGTAGATAGCCTAGCCATGGTAGGCAAATaGTCCCCAAAGTATAGGGCT +
Preference number: 4 (lower is better)
Translates to: HYLISEELRLMSYLVDSLAMVGK*SPKYRA
Trigger: AGCCCTATACTTTGGGGATCATTTGCCTACCATGGC...TAGGCTATCTACCAGGTAGCTCATTAAACGTAATTCTTCAGATATGAGATAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp GAATTACGTTTAATGAGCTACCTGGTAGATAGCCTAGAAAACTTGTCCAAAGCACCCTTGCGAATCACCTaGTTTCCAACTGTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: ELRLMSYLVDSLENLSKAPLRIT*FPTVVF
Trigger: GAAAACCACAGTTGGAAATCAGGTGATTCGCAAGGG...TGCTTTGGACAAGTTTTCTAGGCTATCTACCAGGTAGCTCATTAAACGTAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp CAGGCATCTCTGGGATTCTTGCCTTTATTTGTGGTTGAAAGCATAGGCTCTGGAAAGCTACAAGGGCAGTaGTTTTGTAAAGAATTATCC +
Preference number: 4 (lower is better)
Translates to: QASLGFLPLFVVESIGSGKLQGQ*FCKELS
Trigger: GGATAATTCTTTACAAAATCACTGCCCTTGTAGCTT...TCCAGAGCCTATGCTTTCAACCACAAATAAAGGCAAGAATCCCAGAGATGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR TCA 90 bp CACATGCGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGCTTTCGCGATATACAGTTACACTaGGCCTGTTTCAAGGGTAGG +
Preference number: 4 (lower is better)
Translates to: HMRLLMIYCNGYQICCFRDIQLH*ACFKGR
Trigger: CCTACCCTTGAAACAGGCTCAGTGTAACTGTATATC...GCGAAAGCAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCGCATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp CACATGCGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGCTTTCGCGCTGTTTCCTACATGTaGATCATCTGGTCCTTGGTA +
Preference number: 4 (lower is better)
Translates to: HMRLLMIYCNGYQICCFRAVSYM*IIWSLV
Trigger: TACCAAGGACCAGATGATTCACATGTAGGAAACAGC...GCGAAAGCAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCGCATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp CACTATCTCATATCTGAAGAATTACGTTTAATGAGCTACCTGGTAGATAGCCTAGACACCCCTACTCAGTaGATACTTGCTCTGCTGTCT +
Preference number: 4 (lower is better)
Translates to: HYLISEELRLMSYLVDSLDTPTQ*ILALLS
Trigger: AGACAGCAGAGCAAGTATTCACTGAGTAGGGGTGTC...TAGGCTATCTACCAGGTAGCTCATTAAACGTAATTCTTCAGATATGAGATAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp GAATTACGTTTAATGAGCTACCTGGTAGATAGCCTAGAAAACTTGTCCAAAGCACTCCAATGTCACTGCTaGAATTCTAGAGTAGGCTGG +
Preference number: 4 (lower is better)
Translates to: ELRLMSYLVDSLENLSKALQCHC*NSRVGW
Trigger: CCAGCCTACTCTAGAATTTCAGCAGTGACATTGGAG...TGCTTTGGACAAGTTTTCTAGGCTATCTACCAGGTAGCTCATTAAACGTAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp AGCGATGAATGCATTAGTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCAGCAACCAGACAGGATaGGTAAGAGTATCTAGAAGA +
Preference number: 4 (lower is better)
Translates to: SDECISKTGYLPTDVHTCSNQTG*VRVSRR
Trigger: TCTTCTAGATACTCTTACTCATCCTGTCTGGTTGCT...GCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTACTAATGCATTCATCGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp GTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCGACTACTCATGATTTAACAAACACTCCTCTTTaGGTTTCCTCTCTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: VKLVTCLLMSTHATTHDLTNTPL*VSSLLL
Trigger: GAGCAAGAGAGAGGAAACTCAAAGAGGAGTGTTTGT...TAAATCATGAGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp AATGTCTGCTCCAGTGGGGGCAGGACTTTATTGCTATTGTTCACCTCTGTATCAAAACTCGGCATATTCTaGTTTAGAAGTAACAAGCTG +
Preference number: 4 (lower is better)
Translates to: NVCSSGGRTLLLLFTSVSKLGIF*FRSNKL
Trigger: CAGCTTGTTACTTCTAAAGCAGAATATGCCGAGTTT...TGATACAGAGGTGAACAATAGCAATAAAGTCCTGCCCCCACTGGAGCAGACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR GCA 90 bp TATAAAGCCTCTAAAAGGTTAGCAGTTTCTGAGTCAAACCCCAAAGGTTTGACACACGCGATCTGTTTCTaGTTCAATCTCAAGGCGAAC +
Preference number: 4 (lower is better)
Translates to: YKASKRLAVSESNPKGLTHAICF*FNLKAN
Trigger: GTTCGCCTTGAGATTGAAGCAGAAACAGATCGCGTG...TGTCAAACCTTTGGGGTTTGACTCAGAAACTGCTAACCTTTTAGAGGCTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp AGCTTCTTCCTTCCCTACAGAGAGCATCCTATACCTTCCAATGGGCTTATTTTCGACTATCGCTTCAAATaGCATGTCTGGAGTAAACAA +
Preference number: 4 (lower is better)
Translates to: SFFLPYREHPIPSNGLIFDYRFK*HVWSKQ
Trigger: TTGTTTACTCCAGACATGGCATTTGAAGCGATAGTC...GAAAATAAGCCCATTGGAAGGTATAGGATGCTCTCTGTAGGGAAGGAAGAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR GCA 90 bp GTCAACTCTTCAAAGAGGCCTTCCCTCATCACCTTGACAAAAATAAAGCTTGCCGACTATCGCTTCAAATaGCATGTCTGGAGTAAACAA +
Preference number: 4 (lower is better)
Translates to: VNSSKRPSLITLTKIKLADYRFK*HVWSKQ
Trigger: TTGTTTACTCCAGACATGGCATTTGAAGCGATAGTC...GGCAAGCTTTATTTTTGTCAAGGTGATGAGGGAAGGCCTCTTTGAAGAGTTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR GCA 90 bp GTCAACTCTTCAAAGAGGCCTTCCCTCATCACCTTGACAAAAATAAAGCTTGCCAAGAGTGCAAAGATGTaGTTGCTAGACATAAAGCTC +
Preference number: 4 (lower is better)
Translates to: VNSSKRPSLITLTKIKLAKSAKM*LLDIKL
Trigger: GAGCTTTATGTCTAGCAAGCACATCTTTGCACTCTT...GGCAAGCTTTATTTTTGTCAAGGTGATGAGGGAAGGCCTCTTTGAAGAGTTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR GCA 90 bp GAAAAGAAATATGTATGGCTTAGGTCTAAGCCCACTATCTCATATCTGAAGAATCGAAGGAGTCACTGCTaGTGGGGAAAGGAGGTAATG +
Preference number: 4 (lower is better)
Translates to: EKKYVWLRSKPTISYLKNRRSHC*WGKEVM
Trigger: CATTACCTCCTTTCCCCAGCAGCAGTGACTCCTTCG...ATTCTTCAGATATGAGATAGTGGGCTTAGACCTAAGCCATACATATTTCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp AATGCATTAGTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCGACTACTAGTGAATACTTGCTCTaGTGTCTGGGAACAGTTAGC +
Preference number: 4 (lower is better)
Translates to: NALVKLVTCLLMSTHATTSEYLL*CLGTVS
Trigger: GCTAACTGTTCCCAGACAGCAGAGCAAGTATTCACT...AGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTACTAATGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp CACATGCGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGCTTTCGCAGACAATTGGGGCAGTaGAACTGTGGGACTATAATC +
Preference number: 4 (lower is better)
Translates to: HMRLLMIYCNGYQICCFRRQLGQ*NCGTII
Trigger: GATTATAGTCCCACAGTTGCACTGCCCCAATTGTCT...GCGAAAGCAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCGCATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp CAAAACACAAAACCACATTTAGCACAAAGCCAAACCCTGAAGTATATAATCCGTAAGGCCTGGTGTGCATaGTGCACGTCAAACTATGCA +
Preference number: 4 (lower is better)
Translates to: QNTKPHLAQSQTLKYIIRKAWCA*CTSNYA
Trigger: TGCATAGTTTGACGTGCAGCATGCACACCAGGCCTT...ACGGATTATATACTTCAGGGTTTGGCTTTGTGCTAAATGTGGTTTTGTGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp AATGTCTGCTCCAGTGGGGGCAGGACTTTATTGCTATTGTTCACCTCTGTATCAATGACAAGTATAGCATaGAATGGCATAAAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: NVCSSGGRTLLLLFTSVSMTSIA*NGIKRS
Trigger: AGACCTCTTTATGCCATTGCATGCTATACTTGTCAT...TGATACAGAGGTGAACAATAGCAATAAAGTCCTGCCCCCACTGGAGCAGACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR GCA 90 bp TATTCACTCCCTTGTTTAATGTCTGCTCCAGTGGGGGCAGGACTTTATTGCTATCTGCTTGAACTCACATaGTTTACTACCTCTCATCAT +
Preference number: 4 (lower is better)
Translates to: YSLPCLMSAPVGAGLYCYLLELT*FTTSHH
Trigger: ATGATGAGAGGTAGTAAAGCATGTGAGTTCAAGCAG...ATAGCAATAAAGTCCTGCCCCCACTGGAGCAGACATTAAACAAGGGAGTGAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR GCA 90 bp AATGTCTGCTCCAGTGGGGGCAGGACTTTATTGCTATTGTTCACCTCTGTATCAGTTCAATGCTTTCCCTaGATTATCTCATTCAATCCT +
Preference number: 4 (lower is better)
Translates to: NVCSSGGRTLLLLFTSVSVQCFP*IISFNP
Trigger: AGGATTGAATGAGATAATGCAGGGAAAGCATTGAAC...TGATACAGAGGTGAACAATAGCAATAAAGTCCTGCCCCCACTGGAGCAGACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR CCA 90 bp ATGTCCACACATGCGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGTCTCTAGAACATCCCTaGCATCCGTTCCTTCATCCA +
Preference number: 4 (lower is better)
Translates to: MSTHATTHDLLQRLSNMLSLEHP*HPFLHP
Trigger: TGGATGAAGGAACGGATGCCAGGGATGTTCTAGAGA...CAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCGCATGTGTGGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp GCAATGAAGATGAGCGATGAATGCATTAGTAAAACTGGTTACTTGCCTACTGATTCTCTAGAACATCCCTaGCATCCGTTCCTTCATCCA +
Preference number: 4 (lower is better)
Translates to: AMKMSDECISKTGYLPTDSLEHP*HPFLHP
Trigger: TGGATGAAGGAACGGATGCCAGGGATGTTCTAGAGA...ATCAGTAGGCAAGTAACCAGTTTTACTAATGCATTCATCGCTCATCTTCATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp AGAGGACGACATTTTGGTGCAAGTCCTCAATCCTGTATTCCTGAAACTCTGTTATTCAAATGCCATGTCTaGAGTAAACAACCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: RGRHFGASPQSCIPETLLFKCHV*SKQPCP
Trigger: AGGACAGGGTTGTTTACTCCAGACATGGCATTTGAA...TAACAGAGTTTCAGGAATACAGGATTGAGGACTTGCACCAAAATGTCGTCCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR CCA 90 bp CACATGCGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGCTTTCGCTTTCCTCGCAGAGTCTaGGGAAGTTTGCCAGTTTTT +
Preference number: 4 (lower is better)
Translates to: HMRLLMIYCNGYQICCFRFPRRV*GSLPVF
Trigger: AAAAACTGGCAAACTTCCCCAGACTCTGCGAGGAAA...GCGAAAGCAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCGCATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp AAAATTCCAGTTGGCTTCTGGCTGTTTCCTACATGTGAATCATCTGGTCCTTGGATCAATAGCAATACCTaGTCCTTTGTCTTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: KIPVGFWLFPTCESSGPWINSNT*SFVFPS
Trigger: AGAAGGGAAGACAAAGGACCAGGTATTGCTATTGAT...CCAAGGACCAGATGATTCACATGTAGGAAACAGCCAGAAGCCAACTGGAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp AGCGATGAATGCATTAGTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCCCTGATTTCCAACTGTaGTTTTCTTGTGAACCTGAC +
Preference number: 4 (lower is better)
Translates to: SDECISKTGYLPTDVHTCPDFQL*FSCEPD
Trigger: GTCAGGTTCACAAGAAAACCACAGTTGGAAATCAGG...GCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTACTAATGCATTCATCGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp GTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCGACTACTCATGATTTATTGAAGGCGGAAGATTaGTTCCCTGATTTCCAACTG +
Preference number: 4 (lower is better)
Translates to: VKLVTCLLMSTHATTHDLLKAED*FPDFQL
Trigger: CAGTTGGAAATCAGGGAACCAATCTTCCGCCTTCAA...TAAATCATGAGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355305.9
CDS-3UTR CCA 90 bp AGCGATGAATGCATTAGTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCCCAATTGTGGGTCCATaGAAAAGTTTTCTGCTTGTC +
Preference number: 4 (lower is better)
Translates to: SDECISKTGYLPTDVHTCPIVGP*KSFLLV
Trigger: GACAAGCAGAAAACTTTTCCATGGACCCACAATTGG...GCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTACTAATGCATTCATCGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp AATGCATTAGTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCGACTACTACTTGCTCTGCTGTCTaGGAACAGTTAGCACACAAA +
Preference number: 4 (lower is better)
Translates to: NALVKLVTCLLMSTHATTTCSAV*EQLAHK
Trigger: TTTGTGTGCTAACTGTTCCCAGACAGCAGAGCAAGT...AGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTACTAATGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp GTTACTTGCCTACTGATGTCCACACATGCGACTACTCATGATTTACTGCAACGGCAATGGCACTCAACATaGCAAGTTCTCTGTTTAATA +
Preference number: 4 (lower is better)
Translates to: VTCLLMSTHATTHDLLQRQWHST*QVLCLI
Trigger: TATTAAACAGAGAACTTGCCATGTTGAGTGCCATTG...CCGTTGCAGTAAATCATGAGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp ATTCCAATTAGAGATCTTAAAGATAGGTCTCCAGAGGTTTTACTTCTTACCGAATCCCATCTTAAGGCCTaGTGTGCATGCTGCACGTCA +
Preference number: 4 (lower is better)
Translates to: IPIRDLKDRSPEVLLLTESHLKA*CACCTS
Trigger: TGACGTGCAGCATGCACACCAGGCCTTAAGATGGGA...TTCGGTAAGAAGTAAAACCTCTGGAGACCTATCTTTAAGATCTCTAATTGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp TATAGGATGACAAGTATAGCATGCAATGGCATAAAGAGGTCTATGTGTGAGTTAGAGAGGTCCACTCAGTaGCAGAGTCTGTTTAACGGT +
Preference number: 4 (lower is better)
Translates to: YRMTSIACNGIKRSMCELERSTQ*QSLFNG
Trigger: ACCGTTAAACAGACTCTGCCACTGAGTGGACCTCTC...TAACTCACACATAGACCTCTTTATGCCATTGCATGCTATACTTGTCATCCTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR CCA 90 bp CTTCCAGATCCTTTACTCCCTCCCTTCTTTGAAGAGCCTGCTCTAATGTCAACTAAGTATAGCATGCAATaGCATAAAGAGGTCTATGTG +
Preference number: 4 (lower is better)
Translates to: LPDPLLPPFFEEPALMSTKYSMQ*HKEVYV
Trigger: CACATAGACCTCTTTATGCCATTGCATGCTATACTT...AGTTGACATTAGAGCAGGCTCTTCAAAGAAGGGAGGGAGTAAAGGATCTGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR CAA 72 bp TCTAGTTTAACTTCCATTTGGAGGGCACAAAGCATATaGTGGGAGGTTCATTGTTTTAGGTGTCAGACAGGT +
Preference number: 4 (lower is better)
Translates to: SSLTSIWRAQSI*WEVHCFRCQTG
Trigger: ACCTGTCTGACACCTAAAACAATGAACCTCCCACAATATGCTTTGTGCCCTCCAAATGGAAGTTAAACTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR TCA 90 bp CACTATCTCATATCTGAAGAATTACGTTTAATGAGCTACCTGGTAGATAGCCTATGGTTGGTAAGTTGCTaGTTAAGGACCTTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: HYLISEELRLMSYLVDSLWLVSC*LRTFCR
Trigger: CCTGCAGAAGGTCCTTAATCAGCAACTTACCAACCA...TAGGCTATCTACCAGGTAGCTCATTAAACGTAATTCTTCAGATATGAGATAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp ATGTCAATGCTGAGATGCCTGGAATTCATCTTCATAAGTCCTCTGTGGGATGAGTTGGGTCTTCTGGTTTaGAATTTTTGTAGGCTTCTA +
Preference number: 4 (lower is better)
Translates to: MSMLRCLEFIFISPLWDELGLLV*NFCRLL
Trigger: TAGAAGCCTACAAAAATTTCAAACCAGAAGACCCAA...CTCATCCCACAGAGGACTTATGAAGATGAATTCCAGGCATCTCAGCATTGACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR TCA 90 bp TATAGGATGACAAGTATAGCATGCAATGGCATAAAGAGGTCTATGTGTGAGTTATCCACAGCAAATTGCTaGACCATCTGCAGCAATGCT +
Preference number: 4 (lower is better)
Translates to: YRMTSIACNGIKRSMCELSTANC*TICSNA
Trigger: AGCATTGCTGCAGATGGTTCAGCAATTTGCTGTGGA...TAACTCACACATAGACCTCTTTATGCCATTGCATGCTATACTTGTCATCCTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR TCA 90 bp CAAAACACAAAACCACATTTAGCACAAAGCCAAACCCTGAAGTATATAATCCGTTCCACAGCAAATTGCTaGACCATCTGCAGCAATGCT +
Preference number: 4 (lower is better)
Translates to: QNTKPHLAQSQTLKYIIRSTANC*TICSNA
Trigger: AGCATTGCTGCAGATGGTTCAGCAATTTGCTGTGGA...ACGGATTATATACTTCAGGGTTTGGCTTTGTGCTAAATGTGGTTTTGTGTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp CACTATCTCATATCTGAAGAATTACGTTTAATGAGCTACCTGGTAGATAGCCTAGATTTTAGCACCACCTaGGAGTTCCAGGGTATCTAC +
Preference number: 4 (lower is better)
Translates to: HYLISEELRLMSYLVDSLDFSTT*EFQGIY
Trigger: GTAGATACCCTGGAACTCTCAGGTGGTGCTAAAATC...TAGGCTATCTACCAGGTAGCTCATTAAACGTAATTCTTCAGATATGAGATAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp GCATCTAGTTTAACTTCCATTTGGAGGGCACAAAGCATATTGTGGGAGGTTCATCTTCATGGTTGGTGTTaGTGTAAGAGACTTGAATGT +
Preference number: 4 (lower is better)
Translates to: ASSLTSIWRAQSILWEVHLHGWC*CKRLEC
Trigger: ACATTCAAGTCTCTTACATCAACACCAACCATGAAG...ATGAACCTCCCACAATATGCTTTGTGCCCTCCAAATGGAAGTTAAACTAGATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR TCA 90 bp CACATGCGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGCTTTCGCACATGCGACTACTCATaGTTTACTGCAACGGTTATC +
Preference number: 4 (lower is better)
Translates to: HMRLLMIYCNGYQICCFRTCDYS*FTATVI
Trigger: GATAACCGTTGCAGTAAATCATGAGTAGTCGCATGT...GCGAAAGCAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCGCATGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp CACTATCTCATATCTGAAGAATTACGTTTAATGAGCTACCTGGTAGATAGCCTATGGTTACTTGCCTACTaGTGTCCACACATGCGACTA +
Preference number: 4 (lower is better)
Translates to: HYLISEELRLMSYLVDSLWLLAY*CPHMRL
Trigger: TAGTCGCATGTGTGGACATCAGTAGGCAAGTAACCA...TAGGCTATCTACCAGGTAGCTCATTAAACGTAATTCTTCAGATATGAGATAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp AATGCATTAGTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCGACTACTAGGTTTGACATACCATaGGCAATGAAGATGAGCGAT +
Preference number: 4 (lower is better)
Translates to: NALVKLVTCLLMSTHATTRFDIP*AMKMSD
Trigger: ATCGCTCATCTTCATTGCTCATGGTATGTCAAACCT...AGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTACTAATGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp AATGCATTAGTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCGACTACTAAGGTTAGCAGTTTCTaGGTCAAACCCCAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: NALVKLVTCLLMSTHATTKVSSF*VKPQRF
Trigger: AAACCTTTGGGGTTTGACTCAGAAACTGCTAACCTT...AGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTACTAATGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp GCACGTCAAACTATGCACATACTAGAGTTTCAGACTTCATTCAACATTGGCATCAAGGTTAGCAGTTTCTaGGTCAAACCCCAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: ARQTMHILEFQTSFNIGIKVSSF*VKPQRF
Trigger: AAACCTTTGGGGTTTGACTCAGAAACTGCTAACCTT...GATGCCAATGTTGAATGAAGTCTGAAACTCTAGTATGTGCATAGTTTGACGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp TATAAAGCCTCTAAAAGGTTAGCAGTTTCTGAGTCAAACCCCAAAGGTTTGACAGCAACTGTAAAAGTGTaGGCTCTGCTCTTATCCCAT +
Preference number: 4 (lower is better)
Translates to: YKASKRLAVSESNPKGLTATVKV*ALLLSH
Trigger: ATGGGATAAGAGCAGAGCTCACACTTTTACAGTTGC...TGTCAAACCTTTGGGGTTTGACTCAGAAACTGCTAACCTTTTAGAGGCTTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp ATGTCCACACATGCGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGGCAACTGTAAAAGTGTaGGCTCTGCTCTTATCCCAT +
Preference number: 4 (lower is better)
Translates to: MSTHATTHDLLQRLSNMLATVKV*ALLLSH
Trigger: ATGGGATAAGAGCAGAGCTCACACTTTTACAGTTGC...CAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCGCATGTGTGGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp GGAGTAGGTAGTAGCATTAATGGTAGACAACAGAATTACTGTCATCCTAAACAGGCTGTTTCCTACATGTaGATCATCTGGTCCTTGGTA +
Preference number: 4 (lower is better)
Translates to: GVGSSINGRQQNYCHPKQAVSYM*IIWSLV
Trigger: TACCAAGGACCAGATGATTCACATGTAGGAAACAGC...CTGTTTAGGATGACAGTAATTCTGTTGTCTACCATTAATGCTACTACCTACTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp CTATGGACATTACCATGTTGTCATGGTAATTATGAGCTTTGTACCTCTCAAAATGACACCCCTACTCAGTaGATACTTGCTCTGCTGTCT +
Preference number: 4 (lower is better)
Translates to: LWTLPCCHGNYELCTSQNDTPTQ*ILALLS
Trigger: AGACAGCAGAGCAAGTATTCACTGAGTAGGGGTGTC...ATTTTGAGAGGTACAAAGCTCATAATTACCATGACAACATGGTAATGTCCATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp AAATATGTATGGCTTAGGTCTAAGCCCACTATCTCATATCTGAAGAATTACGTTGTTTGGGGTTTGGGGTaGGATACGAGAGGATTTAGG +
Preference number: 4 (lower is better)
Translates to: KYVWLRSKPTISYLKNYVVWGLG*DTRGFR
Trigger: CCTAAATCCTCTCGTATCTCACCCCAAACCCCAAAC...AACGTAATTCTTCAGATATGAGATAGTGGGCTTAGACCTAAGCCATACATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp CAAAACACAAAACCACATTTAGCACAAAGCCAAACCCTGAAGTATATAATCCGTCTCCAATGTCACTGCTaGAATTCTAGAGTAGGCTGG +
Preference number: 4 (lower is better)
Translates to: QNTKPHLAQSQTLKYIIRLQCHC*NSRVGW
Trigger: CCAGCCTACTCTAGAATTTCAGCAGTGACATTGGAG...ACGGATTATATACTTCAGGGTTTGGCTTTGTGCTAAATGTGGTTTTGTGTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp GCACGTCAAACTATGCACATACTAGAGTTTCAGACTTCATTCAACATTGGCATCAGCAACCAGACAGGATaGGTAAGAGTATCTAGAAGA +
Preference number: 4 (lower is better)
Translates to: ARQTMHILEFQTSFNIGISNQTG*VRVSRR
Trigger: TCTTCTAGATACTCTTACTCATCCTGTCTGGTTGCT...GATGCCAATGTTGAATGAAGTCTGAAACTCTAGTATGTGCATAGTTTGACGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp AAAATTCCAGTTGGCTTCTGGCTGTTTCCTACATGTGAATCATCTGGTCCTTGGACCAATATACCAGTATaGACAGGTCTTAAGACAAAC +
Preference number: 4 (lower is better)
Translates to: KIPVGFWLFPTCESSGPWTNIPV*TGLKTN
Trigger: GTTTGTCTTAAGACCTGTTCATACTGGTATATTGGT...CCAAGGACCAGATGATTCACATGTAGGAAACAGCCAGAAGCCAACTGGAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp CAAAACACAAAACCACATTTAGCACAAAGCCAAACCCTGAAGTATATAATCCGTCACGCGATCTGTTTCTaGTTCAATCTCAAGGCGAAC +
Preference number: 4 (lower is better)
Translates to: QNTKPHLAQSQTLKYIIRHAICF*FNLKAN
Trigger: GTTCGCCTTGAGATTGAAGCAGAAACAGATCGCGTG...ACGGATTATATACTTCAGGGTTTGGCTTTGTGCTAAATGTGGTTTTGTGTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp AGAGGACGACATTTTGGTGCAAGTCCTCAATCCTGTATTCCTGAAACTCTGTTATGGGTATGGAGGAAATaGCTTTATTCATTCCAGTCA +
Preference number: 4 (lower is better)
Translates to: RGRHFGASPQSCIPETLLWVWRK*LYSFQS
Trigger: TGACTGGAATGAATAAAGGCATTTCCTCCATACCCA...TAACAGAGTTTCAGGAATACAGGATTGAGGACTTGCACCAAAATGTCGTCCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR GCA 90 bp ATAGGGCTGCTATACAAACCTACCTTGGTCAGTACAACATATAAAGCCTCTAAAGAAAAACTTCCTCTCTaGCAGCATGGCTGCCTTTAT +
Preference number: 4 (lower is better)
Translates to: IGLLYKPTLVSTTYKASKEKLPL*QHGCLY
Trigger: ATAAAGGCAGCCATGCTGGCAGAGAGGAAGTTTTTC...TTTAGAGGCTTTATATGTTGTACTGACCAAGGTAGGTTTGTATAGCAGCCCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp GGAGTAGGTAGTAGCATTAATGGTAGACAACAGAATTACTGTCATCCTAAACAGGAAAAACTTCCTCTCTaGCAGCATGGCTGCCTTTAT +
Preference number: 4 (lower is better)
Translates to: GVGSSINGRQQNYCHPKQEKLPL*QHGCLY
Trigger: ATAAAGGCAGCCATGCTGGCAGAGAGGAAGTTTTTC...CTGTTTAGGATGACAGTAATTCTGTTGTCTACCATTAATGCTACTACCTACTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp CTATACAAACCTACCTTGGTCAGTACAACATATAAAGCCTCTAAAAGGTTAGCACCTCTGCTGAGCATTTaGGAAGCCAATGAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: LYKPTLVSTTYKASKRLAPLLSI*EANEVF
Trigger: GAAGACTTCATTGGCTTCGCAAATGCTCAGCAGAGG...TGCTAACCTTTTAGAGGCTTTATATGTTGTACTGACCAAGGTAGGTTTGTATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp CACTATCTCATATCTGAAGAATTACGTTTAATGAGCTACCTGGTAGATAGCCTACCTCTGCTGAGCATTTaGGAAGCCAATGAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: HYLISEELRLMSYLVDSLPLLSI*EANEVF
Trigger: GAAGACTTCATTGGCTTCGCAAATGCTCAGCAGAGG...TAGGCTATCTACCAGGTAGCTCATTAAACGTAATTCTTCAGATATGAGATAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp TATAGGATGACAAGTATAGCATGCAATGGCATAAAGAGGTCTATGTGTGAGTTATCTTGTGAACCTGACTaGTCCTCTGCTGAGCATTTG +
Preference number: 4 (lower is better)
Translates to: YRMTSIACNGIKRSMCELSCEPD*SSAEHL
Trigger: CAAATGCTCAGCAGAGGAGCAGTCAGGTTCACAAGA...TAACTCACACATAGACCTCTTTATGCCATTGCATGCTATACTTGTCATCCTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR GCA 90 bp CGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGCTTTCGCATAATTCTCCTGGGAATCACATaGCAGCTCAAGGAAGCGATA +
Preference number: 4 (lower is better)
Translates to: RLLMIYCNGYQICCFRIILLGIT*QLKEAI
Trigger: TATCGCTTCCTTGAGCTGGCATGTGATTCCCAGGAG...AATTATGCGAAAGCAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp GTTACTTGCCTACTGATGTCCACACATGCGACTACTCATGATTTACTGCAACGGCATGGAAAAGTTTTCTaGTTGTCCATTCTCATCATT +
Preference number: 4 (lower is better)
Translates to: VTCLLMSTHATTHDLLQRHGKVF*LSILII
Trigger: AATGATGAGAATGGACAAGCAGAAAACTTTTCCATG...CCGTTGCAGTAAATCATGAGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp GCATCCTATACCTTCCAATGGGCTTATTTTCAGGACTCACAGAGCCAGACTAATCATCTCTGGGATTCTTaGCTTTATTTGTGGTTGAAA +
Preference number: 4 (lower is better)
Translates to: ASYTFQWAYFQDSQSQTNHLWDS*LYLWLK
Trigger: TTTCAACCACAAATAAAGGCAAGAATCCCAGAGATG...ATTAGTCTGGCTCTGTGAGTCCTGAAAATAAGCCCATTGGAAGGTATAGGATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR GCA 90 bp GCAATGAAGATGAGCGATGAATGCATTAGTAAAACTGGTTACTTGCCTACTGATTACTCAGTGAATACTTaGTCTGCTGTCTGGGAACAG +
Preference number: 4 (lower is better)
Translates to: AMKMSDECISKTGYLPTDYSVNT*SAVWEQ
Trigger: CTGTTCCCAGACAGCAGAGCAAGTATTCACTGAGTA...ATCAGTAGGCAAGTAACCAGTTTTACTAATGCATTCATCGCTCATCTTCATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp GAAAAGAAATATGTATGGCTTAGGTCTAAGCCCACTATCTCATATCTGAAGAATAAGGCCTGGTGTGCATaGTGCACGTCAAACTATGCA +
Preference number: 4 (lower is better)
Translates to: EKKYVWLRSKPTISYLKNKAWCA*CTSNYA
Trigger: TGCATAGTTTGACGTGCAGCATGCACACCAGGCCTT...ATTCTTCAGATATGAGATAGTGGGCTTAGACCTAAGCCATACATATTTCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp TATTCACTCCCTTGTTTAATGTCTGCTCCAGTGGGGGCAGGACTTTATTGCTATAAAATCATATATGCGTaGTTCTGTACTCCTGGCTAT +
Preference number: 4 (lower is better)
Translates to: YSLPCLMSAPVGAGLYCYKIIYA*FCTPGY
Trigger: ATAGCCAGGAGTACAGAAGCACGCATATATGATTTT...ATAGCAATAAAGTCCTGCCCCCACTGGAGCAGACATTAAACAAGGGAGTGAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR CCA 90 bp CGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGCTTTCGCATAATTTCCTCTCTGCCAGCATaGCTGCCTTTATGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: RLLMIYCNGYQICCFRIISSLPA*LPLCPS
Trigger: AGAAGGACATAAAGGCAGCCATGCTGGCAGAGAGGA...AATTATGCGAAAGCAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp TATACCTTCCAATGGGCTTATTTTCAGGACTCACAGAGCCAGACTAATGCCACATTTGGTCTTCCTTGTTaGGTCTTCTGGTTTGAAATT +
Preference number: 4 (lower is better)
Translates to: YTFQWAYFQDSQSQTNATFGLPC*VFWFEI
Trigger: AATTTCAAACCAGAAGACCCAACAAGGAAGACCAAA...TGTGGCATTAGTCTGGCTCTGTGAGTCCTGAAAATAAGCCCATTGGAAGGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR CCA 90 bp TATTCACTCCCTTGTTTAATGTCTGCTCCAGTGGGGGCAGGACTTTATTGCTATTTTGGTCTTCCTTGTTaGGTCTTCTGGTTTGAAATT +
Preference number: 4 (lower is better)
Translates to: YSLPCLMSAPVGAGLYCYFGLPC*VFWFEI
Trigger: AATTTCAAACCAGAAGACCCAACAAGGAAGACCAAA...ATAGCAATAAAGTCCTGCCCCCACTGGAGCAGACATTAAACAAGGGAGTGAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR CCA 90 bp CACATGCGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGCTTTCGCTTCAAATGCCATGTCTaGAGTAAACAACCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: HMRLLMIYCNGYQICCFRFKCHV*SKQPCP
Trigger: AGGACAGGGTTGTTTACTCCAGACATGGCATTTGAA...GCGAAAGCAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCGCATGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp ATAGGGCTGCTATACAAACCTACCTTGGTCAGTACAACATATAAAGCCTCTAAATTTCCTCGCAGAGTCTaGGGAAGTTTGCCAGTTTTT +
Preference number: 4 (lower is better)
Translates to: IGLLYKPTLVSTTYKASKFPRRV*GSLPVF
Trigger: AAAAACTGGCAAACTTCCCCAGACTCTGCGAGGAAA...TTTAGAGGCTTTATATGTTGTACTGACCAAGGTAGGTTTGTATAGCAGCCCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp TATAAAGCCTCTAAAAGGTTAGCAGTTTCTGAGTCAAACCCCAAAGGTTTGACATCTCGCTCACGAATGTaGTTAGCAACAATCCTTTCC +
Preference number: 4 (lower is better)
Translates to: YKASKRLAVSESNPKGLTSRSRM*LATILS
Trigger: GGAAAGGATTGTTGCTAACCACATTCGTGAGCGAGA...TGTCAAACCTTTGGGGTTTGACTCAGAAACTGCTAACCTTTTAGAGGCTTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp GCACGTCAAACTATGCACATACTAGAGTTTCAGACTTCATTCAACATTGGCATCCCTGATTTCCAACTGTaGTTTTCTTGTGAACCTGAC +
Preference number: 4 (lower is better)
Translates to: ARQTMHILEFQTSFNIGIPDFQL*FSCEPD
Trigger: GTCAGGTTCACAAGAAAACCACAGTTGGAAATCAGG...GATGCCAATGTTGAATGAAGTCTGAAACTCTAGTATGTGCATAGTTTGACGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp GTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCGACTACTCATGATTTACCAATTGTGGGTCCATaGAAAAGTTTTCTGCTTGTC +
Preference number: 4 (lower is better)
Translates to: VKLVTCLLMSTHATTHDLPIVGP*KSFLLV
Trigger: GACAAGCAGAAAACTTTTCCATGGACCCACAATTGG...TAAATCATGAGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp AGCGATGAATGCATTAGTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCTCCATCAGGGTATTTTaGTCCTCTGAAGAATACAAC +
Preference number: 4 (lower is better)
Translates to: SDECISKTGYLPTDVHTCSIRVF*SSEEYN
Trigger: GTTGTATTCTTCAGAGGACCAAAATACCCTGATGGA...GCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTACTAATGCATTCATCGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp GGAGTAGGTAGTAGCATTAATGGTAGACAACAGAATTACTGTCATCCTAAACAGTTCAATACCCTTTTCTaGAGTGACCTGGATAGGGAC +
Preference number: 4 (lower is better)
Translates to: GVGSSINGRQQNYCHPKQFNTLF*SDLDRD
Trigger: GTCCCTATCCAGGTCACTCCAGAAAAGGGTATTGAA...CTGTTTAGGATGACAGTAATTCTGTTGTCTACCATTAATGCTACTACCTACTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp GGAGTAGGTAGTAGCATTAATGGTAGACAACAGAATTACTGTCATCCTAAACAGACTTGCTCTGCTGTCTaGGAACAGTTAGCACACAAA +
Preference number: 4 (lower is better)
Translates to: GVGSSINGRQQNYCHPKQTCSAV*EQLAHK
Trigger: TTTGTGTGCTAACTGTTCCCAGACAGCAGAGCAAGT...CTGTTTAGGATGACAGTAATTCTGTTGTCTACCATTAATGCTACTACCTACTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp TATAAAGCCTCTAAAAGGTTAGCAGTTTCTGAGTCAAACCCCAAAGGTTTGACAGGGGCAGTGCAACTGTaGGACTATAATCTAAAAGCA +
Preference number: 4 (lower is better)
Translates to: YKASKRLAVSESNPKGLTGAVQL*DYNLKA
Trigger: TGCTTTTAGATTATAGTCCCACAGTTGCACTGCCCC...TGTCAAACCTTTGGGGTTTGACTCAGAAACTGCTAACCTTTTAGAGGCTTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp CTTCCAGATCCTTTACTCCCTCCCTTCTTTGAAGAGCCTGCTCTAATGTCAACTTGCATATGTGTTTTATaGCTGAGTAGGACATTTTCT +
Preference number: 4 (lower is better)
Translates to: LPDPLLPPFFEEPALMSTCICVL*LSRTFS
Trigger: AGAAAATGTCCTACTCAGCCATAAAACACATATGCA...AGTTGACATTAGAGCAGGCTCTTCAAAGAAGGGAGGGAGTAAAGGATCTGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR TCA 90 bp TATAAAGCCTCTAAAAGGTTAGCAGTTTCTGAGTCAAACCCCAAAGGTTTGACAATCATTTCTCTGATCTaGTACTCGATATCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: YKASKRLAVSESNPKGLTIISLI*YSISGG
Trigger: GCCACCAGATATCGAGTATCAGATCAGAGAAATGAT...TGTCAAACCTTTGGGGTTTGACTCAGAAACTGCTAACCTTTTAGAGGCTTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp TTCAGACTTCATTCAACATTGGCATCTCCTTTTAGCAGAATACAAACCCTTTGGATCATTTCTCTGATCTaGTACTCGATATCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: FRLHSTLASPFSRIQTLWIISLI*YSISGG
Trigger: GCCACCAGATATCGAGTATCAGATCAGAGAAATGAT...CCAAAGGGTTTGTATTCTGCTAAAAGGAGATGCCAATGTTGAATGAAGTCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp TATAAAGCCTCTAAAAGGTTAGCAGTTTCTGAGTCAAACCCCAAAGGTTTGACAATGGTTCTCAGACCTTaGGGATCAACTTCTTTAGCT +
Preference number: 4 (lower is better)
Translates to: YKASKRLAVSESNPKGLTMVLRP*GSTSLA
Trigger: AGCTAAAGAAGTTGATCCTCAAGGTCTGAGAACCAT...TGTCAAACCTTTGGGGTTTGACTCAGAAACTGCTAACCTTTTAGAGGCTTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp GAAAAGAAATATGTATGGCTTAGGTCTAAGCCCACTATCTCATATCTGAAGAATCCTGTAGTTTGTTCCTaGAGTTTGGTAGGGTATCCC +
Preference number: 4 (lower is better)
Translates to: EKKYVWLRSKPTISYLKNPVVCS*SLVGYP
Trigger: GGGATACCCTACCAAACTTCAGGAACAAACTACAGG...ATTCTTCAGATATGAGATAGTGGGCTTAGACCTAAGCCATACATATTTCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp CGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGCTTTCGCATAATTTCCACAGCAAATTGCTaGACCATCTGCAGCAATGCT +
Preference number: 4 (lower is better)
Translates to: RLLMIYCNGYQICCFRIISTANC*TICSNA
Trigger: AGCATTGCTGCAGATGGTTCAGCAATTTGCTGTGGA...AATTATGCGAAAGCAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp ATTCCAATTAGAGATCTTAAAGATAGGTCTCCAGAGGTTTTACTTCTTACCGAATCCAGGGTATCTACTTaGTCCCCTGACCCTTCAATT +
Preference number: 4 (lower is better)
Translates to: IPIRDLKDRSPEVLLLTESRVST*SPDPSI
Trigger: AATTGAAGGGTCAGGGGATCAAGTAGATACCCTGGA...TTCGGTAAGAAGTAAAACCTCTGGAGACCTATCTTTAAGATCTCTAATTGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp GTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCGACTACTCATGATTTACTTCATGGTTGGTGTTaGTGTAAGAGACTTGAATGT +
Preference number: 4 (lower is better)
Translates to: VKLVTCLLMSTHATTHDLLHGWC*CKRLEC
Trigger: ACATTCAAGTCTCTTACATCAACACCAACCATGAAG...TAAATCATGAGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp AATGCATTAGTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCGACTACTCTTCATGGTTGGTGTTaGTGTAAGAGACTTGAATGT +
Preference number: 4 (lower is better)
Translates to: NALVKLVTCLLMSTHATTLHGWC*CKRLEC
Trigger: ACATTCAAGTCTCTTACATCAACACCAACCATGAAG...AGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTACTAATGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp GGAGTAGGTAGTAGCATTAATGGTAGACAACAGAATTACTGTCATCCTAAACAGGCTTCTTTCAGTGCTTaGTACATTCGAAGCATCTCA +
Preference number: 4 (lower is better)
Translates to: GVGSSINGRQQNYCHPKQASFSA*YIRSIS
Trigger: TGAGATGCTTCGAATGTATCAAGCACTGAAAGAAGC...CTGTTTAGGATGACAGTAATTCTGTTGTCTACCATTAATGCTACTACCTACTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp ATGTCCACACATGCGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGGCTTCTTTCAGTGCTTaGTACATTCGAAGCATCTCA +
Preference number: 4 (lower is better)
Translates to: MSTHATTHDLLQRLSNMLASFSA*YIRSIS
Trigger: TGAGATGCTTCGAATGTATCAAGCACTGAAAGAAGC...CAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCGCATGTGTGGACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp TTCAGACTTCATTCAACATTGGCATCTCCTTTTAGCAGAATACAAACCCTTTGGACATGCGACTACTCATaGTTTACTGCAACGGTTATC +
Preference number: 4 (lower is better)
Translates to: FRLHSTLASPFSRIQTLWTCDYS*FTATVI
Trigger: GATAACCGTTGCAGTAAATCATGAGTAGTCGCATGT...CCAAAGGGTTTGTATTCTGCTAAAAGGAGATGCCAATGTTGAATGAAGTCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp ATAGGCAATTATGGAGTAGGTAGTAGCATTAATGGTAGACAACAGAATTACTGTTGGTTACTTGCCTACTaGTGTCCACACATGCGACTA +
Preference number: 4 (lower is better)
Translates to: IGNYGVGSSINGRQQNYCWLLAY*CPHMRL
Trigger: TAGTCGCATGTGTGGACATCAGTAGGCAAGTAACCA...ACAGTAATTCTGTTGTCTACCATTAATGCTACTACCTACTCCATAATTGCCTAT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp GAATTACGTTTAATGAGCTACCTGGTAGATAGCCTAGAAAACTTGTCCAAAGCACAAACCCCAAAGGTTTaGCATACCATGAGCAATGAA +
Preference number: 4 (lower is better)
Translates to: ELRLMSYLVDSLENLSKAQTPKV*HTMSNE
Trigger: TTCATTGCTCATGGTATGTCAAACCTTTGGGGTTTG...TGCTTTGGACAAGTTTTCTAGGCTATCTACCAGGTAGCTCATTAAACGTAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp GCAATGAAGATGAGCGATGAATGCATTAGTAAAACTGGTTACTTGCCTACTGATCAAACCCCAAAGGTTTaGCATACCATGAGCAATGAA +
Preference number: 4 (lower is better)
Translates to: AMKMSDECISKTGYLPTDQTPKV*HTMSNE
Trigger: TTCATTGCTCATGGTATGTCAAACCTTTGGGGTTTG...ATCAGTAGGCAAGTAACCAGTTTTACTAATGCATTCATCGCTCATCTTCATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp TATAAAGCCTCTAAAAGGTTAGCAGTTTCTGAGTCAAACCCCAAAGGTTTGACAAAGGTTAGCAGTTTCTaGGTCAAACCCCAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: YKASKRLAVSESNPKGLTKVSSF*VKPQRF
Trigger: AAACCTTTGGGGTTTGACTCAGAAACTGCTAACCTT...TGTCAAACCTTTGGGGTTTGACTCAGAAACTGCTAACCTTTTAGAGGCTTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp CTATGGACATTACCATGTTGTCATGGTAATTATGAGCTTTGTACCTCTCAAAATCCCTTGCGAATCACCTaGTTTCCAACTGTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: LWTLPCCHGNYELCTSQNPLRIT*FPTVVF
Trigger: GAAAACCACAGTTGGAAATCAGGTGATTCGCAAGGG...ATTTTGAGAGGTACAAAGCTCATAATTACCATGACAACATGGTAATGTCCATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp GCAATGAAGATGAGCGATGAATGCATTAGTAAAACTGGTTACTTGCCTACTGATCCATGCCATTTCTACTaGCTTCATTTCAGGAACCAT +
Preference number: 4 (lower is better)
Translates to: AMKMSDECISKTGYLPTDPCHFY*LHFRNH
Trigger: ATGGTTCCTGAAATGAAGTCAGTAGAAATGGCATGG...ATCAGTAGGCAAGTAACCAGTTTTACTAATGCATTCATCGCTCATCTTCATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp GAATTACGTTTAATGAGCTACCTGGTAGATAGCCTAGAAAACTTGTCCAAAGCACCATGCCATTTCTACTaGCTTCATTTCAGGAACCAT +
Preference number: 4 (lower is better)
Translates to: ELRLMSYLVDSLENLSKAPCHFY*LHFRNH
Trigger: ATGGTTCCTGAAATGAAGTCAGTAGAAATGGCATGG...TGCTTTGGACAAGTTTTCTAGGCTATCTACCAGGTAGCTCATTAAACGTAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp AGAGGACGACATTTTGGTGCAAGTCCTCAATCCTGTATTCCTGAAACTCTGTTAAAAGAGGTCTATGTGTaGGTTAAAATAACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: RGRHFGASPQSCIPETLLKEVYV*VKITAE
Trigger: CTCTGCTGTTATTTTAACTCACACATAGACCTCTTT...TAACAGAGTTTCAGGAATACAGGATTGAGGACTTGCACCAAAATGTCGTCCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR GCA 90 bp ATTCCAATTAGAGATCTTAAAGATAGGTCTCCAGAGGTTTTACTTCTTACCGAACACGCGATCTGTTTCTaGTTCAATCTCAAGGCGAAC +
Preference number: 4 (lower is better)
Translates to: IPIRDLKDRSPEVLLLTEHAICF*FNLKAN
Trigger: GTTCGCCTTGAGATTGAAGCAGAAACAGATCGCGTG...TTCGGTAAGAAGTAAAACCTCTGGAGACCTATCTTTAAGATCTCTAATTGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp GTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCGACTACTCATGATTTATGGGTATGGAGGAAATaGCTTTATTCATTCCAGTCA +
Preference number: 4 (lower is better)
Translates to: VKLVTCLLMSTHATTHDLWVWRK*LYSFQS
Trigger: TGACTGGAATGAATAAAGGCATTTCCTCCATACCCA...TAAATCATGAGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp CACATGCGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGCTTTCGCGACTATCGCTTCAAATaGCATGTCTGGAGTAAACAA +
Preference number: 4 (lower is better)
Translates to: HMRLLMIYCNGYQICCFRDYRFK*HVWSKQ
Trigger: TTGTTTACTCCAGACATGGCATTTGAAGCGATAGTC...GCGAAAGCAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCGCATGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp AAATATGTATGGCTTAGGTCTAAGCCCACTATCTCATATCTGAAGAATTACGTTCCTCTGCTGAGCATTTaGGAAGCCAATGAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: KYVWLRSKPTISYLKNYVPLLSI*EANEVF
Trigger: GAAGACTTCATTGGCTTCGCAAATGCTCAGCAGAGG...AACGTAATTCTTCAGATATGAGATAGTGGGCTTAGACCTAAGCCATACATATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp CGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGCTTTCGCATAATTTCTTGTGAACCTGACTaGTCCTCTGCTGAGCATTTG +
Preference number: 4 (lower is better)
Translates to: RLLMIYCNGYQICCFRIISCEPD*SSAEHL
Trigger: CAAATGCTCAGCAGAGGAGCAGTCAGGTTCACAAGA...AATTATGCGAAAGCAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp GGAGTAGGTAGTAGCATTAATGGTAGACAACAGAATTACTGTCATCCTAAACAGTTGCGAATCACAATTTaGCTTGAAGGCGGAAGATTG +
Preference number: 4 (lower is better)
Translates to: GVGSSINGRQQNYCHPKQLRITI*LEGGRL
Trigger: CAATCTTCCGCCTTCAAGGCAAATTGTGATTCGCAA...CTGTTTAGGATGACAGTAATTCTGTTGTCTACCATTAATGCTACTACCTACTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355305.9
CDS-3UTR GCA 90 bp GCACGTCAAACTATGCACATACTAGAGTTTCAGACTTCATTCAACATTGGCATCAAGAGTGCAAAGATGTaGTTGCTAGACATAAAGCTC +
Preference number: 4 (lower is better)
Translates to: ARQTMHILEFQTSFNIGIKSAKM*LLDIKL
Trigger: GAGCTTTATGTCTAGCAAGCACATCTTTGCACTCTT...GATGCCAATGTTGAATGAAGTCTGAAACTCTAGTATGTGCATAGTTTGACGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp GCATCTAGTTTAACTTCCATTTGGAGGGCACAAAGCATATTGTGGGAGGTTCATCTCTGTATTAAAGAGTaGAAAGATGTGCTTGCTAGA +
Preference number: 4 (lower is better)
Translates to: ASSLTSIWRAQSILWEVHLCIKE*KDVLAR
Trigger: TCTAGCAAGCACATCTTTGCACTCTTTAATACAGAG...ATGAACCTCCCACAATATGCTTTGTGCCCTCCAAATGGAAGTTAAACTAGATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR GCA 90 bp AGCGATGAATGCATTAGTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCCTCTGTATTAAAGAGTaGAAAGATGTGCTTGCTAGA +
Preference number: 4 (lower is better)
Translates to: SDECISKTGYLPTDVHTCLCIKE*KDVLAR
Trigger: TCTAGCAAGCACATCTTTGCACTCTTTAATACAGAG...GCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTACTAATGCATTCATCGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp AGCGATGAATGCATTAGTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCTTGCAAACTACCTCGTaGTTCTGGAAAAGTTTATTC +
Preference number: 4 (lower is better)
Translates to: SDECISKTGYLPTDVHTCLQTTS*FWKSLF
Trigger: GAATAAACTTTTCCAGAAGCACGAGGTAGTTTGCAA...GCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTACTAATGCATTCATCGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp AATGCATTAGTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCGACTACTGGGACTTTGAAATACTaGAACTGTAAAAGTGTGAGC +
Preference number: 4 (lower is better)
Translates to: NALVKLVTCLLMSTHATTGTLKY*NCKSVS
Trigger: GCTCACACTTTTACAGTTGCAGTATTTCAAAGTCCC...AGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTACTAATGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp ATAGGGCTGCTATACAAACCTACCTTGGTCAGTACAACATATAAAGCCTCTAAACTACTTCATGTTCTATaGAGAGCAACTGTCCCTGTA +
Preference number: 4 (lower is better)
Translates to: IGLLYKPTLVSTTYKASKLLHVL*RATVPV
Trigger: TACAGGGACAGTTGCTCTCCATAGAACATGAAGTAG...TTTAGAGGCTTTATATGTTGTACTGACCAAGGTAGGTTTGTATAGCAGCCCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp TTCAGACTTCATTCAACATTGGCATCTCCTTTTAGCAGAATACAAACCCTTTGGCTACTTCATGTTCTATaGAGAGCAACTGTCCCTGTA +
Preference number: 4 (lower is better)
Translates to: FRLHSTLASPFSRIQTLWLLHVL*RATVPV
Trigger: TACAGGGACAGTTGCTCTCCATAGAACATGAAGTAG...CCAAAGGGTTTGTATTCTGCTAAAAGGAGATGCCAATGTTGAATGAAGTCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp ATAGGGCTGCTATACAAACCTACCTTGGTCAGTACAACATATAAAGCCTCTAAATTCAAATGCCATGTCTaGAGTAAACAACCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: IGLLYKPTLVSTTYKASKFKCHV*SKQPCP
Trigger: AGGACAGGGTTGTTTACTCCAGACATGGCATTTGAA...TTTAGAGGCTTTATATGTTGTACTGACCAAGGTAGGTTTGTATAGCAGCCCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp TATAGGATGACAAGTATAGCATGCAATGGCATAAAGAGGTCTATGTGTGAGTTATTTCCTCGCAGAGTCTaGGGAAGTTTGCCAGTTTTT +
Preference number: 4 (lower is better)
Translates to: YRMTSIACNGIKRSMCELFPRRV*GSLPVF
Trigger: AAAAACTGGCAAACTTCCCCAGACTCTGCGAGGAAA...TAACTCACACATAGACCTCTTTATGCCATTGCATGCTATACTTGTCATCCTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR CCA 90 bp GAATTACGTTTAATGAGCTACCTGGTAGATAGCCTAGAAAACTTGTCCAAAGCATTGCCTCTCCAATTGTaGGTCCATGGAAAAGTTTTC +
Preference number: 4 (lower is better)
Translates to: ELRLMSYLVDSLENLSKALPLQL*VHGKVF
Trigger: GAAAACTTTTCCATGGACCCACAATTGGAGAGGCAA...TGCTTTGGACAAGTTTTCTAGGCTATCTACCAGGTAGCTCATTAAACGTAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp TATAAAGCCTCTAAAAGGTTAGCAGTTTCTGAGTCAAACCCCAAAGGTTTGACATTGCCTCTCCAATTGTaGGTCCATGGAAAAGTTTTC +
Preference number: 4 (lower is better)
Translates to: YKASKRLAVSESNPKGLTLPLQL*VHGKVF
Trigger: GAAAACTTTTCCATGGACCCACAATTGGAGAGGCAA...TGTCAAACCTTTGGGGTTTGACTCAGAAACTGCTAACCTTTTAGAGGCTTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp CACATGCGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGCTTTCGCTTTTCTGGAGTGACCTaGATAGGGACTTTGAAATAC +
Preference number: 4 (lower is better)
Translates to: HMRLLMIYCNGYQICCFRFSGVT*IGTLKY
Trigger: GTATTTCAAAGTCCCTATCCAGGTCACTCCAGAAAA...GCGAAAGCAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCGCATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp GTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCGACTACTCATGATTTATTTTCTGGAGTGACCTaGATAGGGACTTTGAAATAC +
Preference number: 4 (lower is better)
Translates to: VKLVTCLLMSTHATTHDLFSGVT*IGTLKY
Trigger: GTATTTCAAAGTCCCTATCCAGGTCACTCCAGAAAA...TAAATCATGAGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp GAATTACGTTTAATGAGCTACCTGGTAGATAGCCTAGAAAACTTGTCCAAAGCAATTCCAGTTGGCTTCTaGCTGTTTCCTACATGTGAA +
Preference number: 4 (lower is better)
Translates to: ELRLMSYLVDSLENLSKAIPVGF*LFPTCE
Trigger: TTCACATGTAGGAAACAGCCAGAAGCCAACTGGAAT...TGCTTTGGACAAGTTTTCTAGGCTATCTACCAGGTAGCTCATTAAACGTAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp ATAGGGCTGCTATACAAACCTACCTTGGTCAGTACAACATATAAAGCCTCTAAAACACAAAATTCCAGTTaGCTTCTGGCTGTTTCCTAC +
Preference number: 4 (lower is better)
Translates to: IGLLYKPTLVSTTYKASKTQNSS*LLAVSY
Trigger: GTAGGAAACAGCCAGAAGCCAACTGGAATTTTGTGT...TTTAGAGGCTTTATATGTTGTACTGACCAAGGTAGGTTTGTATAGCAGCCCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp ATGTCCACACATGCGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGACACAAAATTCCAGTTaGCTTCTGGCTGTTTCCTAC +
Preference number: 4 (lower is better)
Translates to: MSTHATTHDLLQRLSNMLTQNSS*LLAVSY
Trigger: GTAGGAAACAGCCAGAAGCCAACTGGAATTTTGTGT...CAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCGCATGTGTGGACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp GAAAAGAAATATGTATGGCTTAGGTCTAAGCCCACTATCTCATATCTGAAGAATACAAAGGTAGACAATTaGGGCAGTGCAACTGTGGGA +
Preference number: 4 (lower is better)
Translates to: EKKYVWLRSKPTISYLKNTKVDN*GSATVG
Trigger: TCCCACAGTTGCACTGCCCCAATTGTCTACCTTTGT...ATTCTTCAGATATGAGATAGTGGGCTTAGACCTAAGCCATACATATTTCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp AGAGGACGACATTTTGGTGCAAGTCCTCAATCCTGTATTCCTGAAACTCTGTTAACACACTACCATCAATaGATAGGGAAGAGTAATAAG +
Preference number: 4 (lower is better)
Translates to: RGRHFGASPQSCIPETLLTHYHQ*IGKSNK
Trigger: CTTATTACTCTTCCCTATCCATTGATGGTAGTGTGT...TAACAGAGTTTCAGGAATACAGGATTGAGGACTTGCACCAAAATGTCGTCCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR CAA 72 bp GATCCCCAAAGTATAGGGCTGCTATACAAACCTACCTaGGTCAGTACAACATATAAAGCCTCTAAAAGGTTA +
Preference number: 4 (lower is better)
Translates to: DPQSIGLLYKPT*VSTTYKASKRL
Trigger: TAACCTTTTAGAGGCTTTATATGTTGTACTGACCAAGGTAGGTTTGTATAGCAGCCCTATACTTTGGGGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
3UTR CAA 72 bp AGAAGCTCTTTAGAGCAAACAGTGCAGACTTTTCCTTaGCAAACTACCTCGTGCTTCTGGAAAAGTTTATTC +
Preference number: 4 (lower is better)
Translates to: RSSLEQTVQTFP*QTTSCFWKSLF
Trigger: GAATAAACTTTTCCAGAAGCACGAGGTAGTTTGCAAAGGAAAAGTCTGCACTGTTTGCTCTAAAGAGCTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
3UTR CAA 72 bp TTAAATAATGGTGCACAATTATCGTTATTCACTCCCTaGTTTAATGTCTGCTCCAGTGGGGGCAGGACTTTA +
Preference number: 4 (lower is better)
Translates to: LNNGAQLSLFTP*FNVCSSGGRTL
Trigger: TAAAGTCCTGCCCCCACTGGAGCAGACATTAAACAAGGGAGTGAATAACGATAATTGTGCACCATTATTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520906.5
3UTR CAA 72 bp AATGTAAATATAAGTGGTGTGACACAACAGCCCTGCTaGAACTCACATGCTTTACTACCTCTCATCATTCTC +
Preference number: 4 (lower is better)
Translates to: NVNISGVTQQPC*NSHALLPLIIL
Trigger: GAGAATGATGAGAGGTAGTAAAGCATGTGAGTTCAAGCAGGGCTGTTGTGTCACACCACTTATATTTACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR TCA 90 bp CTATACAAACCTACCTTGGTCAGTACAACATATAAAGCCTCTAAAAGGTTAGCAATCATTTCTCTGATCTaGTACTCGATATCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: LYKPTLVSTTYKASKRLAIISLI*YSISGG
Trigger: GCCACCAGATATCGAGTATCAGATCAGAGAAATGAT...TGCTAACCTTTTAGAGGCTTTATATGTTGTACTGACCAAGGTAGGTTTGTATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp GCACGTCAAACTATGCACATACTAGAGTTTCAGACTTCATTCAACATTGGCATCTTGGGTCTTCTGGTTTaGAATTTTTGTAGGCTTCTA +
Preference number: 4 (lower is better)
Translates to: ARQTMHILEFQTSFNIGILGLLV*NFCRLL
Trigger: TAGAAGCCTACAAAAATTTCAAACCAGAAGACCCAA...GATGCCAATGTTGAATGAAGTCTGAAACTCTAGTATGTGCATAGTTTGACGTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp CGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGCTTTCGCATAATTGGAAGATTGGTTCCCTaGTTTCCAACTGTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: RLLMIYCNGYQICCFRIIGRLVP*FPTVVF
Trigger: GAAAACCACAGTTGGAAATCAGGGAACCAATCTTCC...AATTATGCGAAAGCAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355305.9
CDS-3UTR TCA 90 bp GCACGTCAAACTATGCACATACTAGAGTTTCAGACTTCATTCAACATTGGCATCCATATGCTTCTAGCATaGAGCAAAACACATTGGAAT +
Preference number: 4 (lower is better)
Translates to: ARQTMHILEFQTSFNIGIHMLLA*SKTHWN
Trigger: ATTCCAATGTGTTTTGCTTCATGCTAGAAGCATATG...GATGCCAATGTTGAATGAAGTCTGAAACTCTAGTATGTGCATAGTTTGACGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp AATGCATTAGTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCGACTACTTACTTCTGTAGAATATaGAATAGTGTCATGGGACAC +
Preference number: 4 (lower is better)
Translates to: NALVKLVTCLLMSTHATTYFCRI*NSVMGH
Trigger: GTGTCCCATGACACTATTTCATATTCTACAGAAGTA...AGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTACTAATGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp CACATGCGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGCTTTCGCAGCAAGTGCCAAAGATaGCAAATGCCATTGTTTATT +
Preference number: 4 (lower is better)
Translates to: HMRLLMIYCNGYQICCFRSKCQR*QMPLFI
Trigger: AATAAACAATGGCATTTGTCATCTTTGGCACTTGCT...GCGAAAGCAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCGCATGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp AATGCATTAGTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCGACTACTAGCAAGTGCCAAAGATaGCAAATGCCATTGTTTATT +
Preference number: 4 (lower is better)
Translates to: NALVKLVTCLLMSTHATTSKCQR*QMPLFI
Trigger: AATAAACAATGGCATTTGTCATCTTTGGCACTTGCT...AGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTACTAATGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp CACATGCGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGCTTTCGCTTGTACCTCTCAAAATaGCTACAATCTGGAGTTAGA +
Preference number: 4 (lower is better)
Translates to: HMRLLMIYCNGYQICCFRLYLSK*LQSGVR
Trigger: TCTAACTCCAGATTGTAGTCATTTTGAGAGGTACAA...GCGAAAGCAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCGCATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp CACATGCGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGCTTTCGCCTTTATTCTTCATTCTaGGGAGATTCCTGTCACTTT +
Preference number: 4 (lower is better)
Translates to: HMRLLMIYCNGYQICCFRLYSSF*GDSCHF
Trigger: AAAGTGACAGGAATCTCCTCAGAATGAAGAATAAAG...GCGAAAGCAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCGCATGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp CTATACAAACCTACCTTGGTCAGTACAACATATAAAGCCTCTAAAAGGTTAGCATTAGAAGTAACAAGCTaGAGCACAAGAGGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: LYKPTLVSTTYKASKRLALEVTS*STRGRL
Trigger: AAGACGACCTCTTGTGCTGCAGCTTGTTACTTCTAA...TGCTAACCTTTTAGAGGCTTTATATGTTGTACTGACCAAGGTAGGTTTGTATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp TTCAGACTTCATTCAACATTGGCATCTCCTTTTAGCAGAATACAAACCCTTTGGGACTATCGCTTCAAATaGCATGTCTGGAGTAAACAA +
Preference number: 4 (lower is better)
Translates to: FRLHSTLASPFSRIQTLWDYRFK*HVWSKQ
Trigger: TTGTTTACTCCAGACATGGCATTTGAAGCGATAGTC...CCAAAGGGTTTGTATTCTGCTAAAAGGAGATGCCAATGTTGAATGAAGTCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp GGAGTAGGTAGTAGCATTAATGGTAGACAACAGAATTACTGTCATCCTAAACAGAAGAGTGCAAAGATGTaGTTGCTAGACATAAAGCTC +
Preference number: 4 (lower is better)
Translates to: GVGSSINGRQQNYCHPKQKSAKM*LLDIKL
Trigger: GAGCTTTATGTCTAGCAAGCACATCTTTGCACTCTT...CTGTTTAGGATGACAGTAATTCTGTTGTCTACCATTAATGCTACTACCTACTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp ATGTCCACACATGCGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGAAGAGTGCAAAGATGTaGTTGCTAGACATAAAGCTC +
Preference number: 4 (lower is better)
Translates to: MSTHATTHDLLQRLSNMLKSAKM*LLDIKL
Trigger: GAGCTTTATGTCTAGCAAGCACATCTTTGCACTCTT...CAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCGCATGTGTGGACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp CACATGCGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGCTTTCGCCTCTGTATTAAAGAGTaGAAAGATGTGCTTGCTAGA +
Preference number: 4 (lower is better)
Translates to: HMRLLMIYCNGYQICCFRLCIKE*KDVLAR
Trigger: TCTAGCAAGCACATCTTTGCACTCTTTAATACAGAG...GCGAAAGCAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCGCATGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp ATGTCCACACATGCGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGGTAAAACTGGTTACTTaGCTACTGATGTCCACACAT +
Preference number: 4 (lower is better)
Translates to: MSTHATTHDLLQRLSNMLVKLVT*LLMSTH
Trigger: ATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTAC...CAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCGCATGTGTGGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp ATAGGCAATTATGGAGTAGGTAGTAGCATTAATGGTAGACAACAGAATTACTGTAGTGAATACTTGCTCTaGTGTCTGGGAACAGTTAGC +
Preference number: 4 (lower is better)
Translates to: IGNYGVGSSINGRQQNYCSEYLL*CLGTVS
Trigger: GCTAACTGTTCCCAGACAGCAGAGCAAGTATTCACT...ACAGTAATTCTGTTGTCTACCATTAATGCTACTACCTACTCCATAATTGCCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp CGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGCTTTCGCATAATTTACTCAGTGAATACTTaGTCTGCTGTCTGGGAACAG +
Preference number: 4 (lower is better)
Translates to: RLLMIYCNGYQICCFRIIYSVNT*SAVWEQ
Trigger: CTGTTCCCAGACAGCAGAGCAAGTATTCACTGAGTA...AATTATGCGAAAGCAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp GAATTACGTTTAATGAGCTACCTGGTAGATAGCCTAGAAAACTTGTCCAAAGCAGCCATTGTTTATTACTaGCTAAGATCAGTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: ELRLMSYLVDSLENLSKAAIVYY*LRSVEG
Trigger: TCCTTCCACTGATCTTAGGCAGTAATAAACAATGGC...TGCTTTGGACAAGTTTTCTAGGCTATCTACCAGGTAGCTCATTAAACGTAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp GTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCGACTACTCATGATTTATTTGGTCTTCCTTGTTaGGTCTTCTGGTTTGAAATT +
Preference number: 4 (lower is better)
Translates to: VKLVTCLLMSTHATTHDLFGLPC*VFWFEI
Trigger: AATTTCAAACCAGAAGACCCAACAAGGAAGACCAAA...TAAATCATGAGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp ATAGGCAATTATGGAGTAGGTAGTAGCATTAATGGTAGACAACAGAATTACTGTTTTCCTCGCAGAGTCTaGGGAAGTTTGCCAGTTTTT +
Preference number: 4 (lower is better)
Translates to: IGNYGVGSSINGRQQNYCFPRRV*GSLPVF
Trigger: AAAAACTGGCAAACTTCCCCAGACTCTGCGAGGAAA...ACAGTAATTCTGTTGTCTACCATTAATGCTACTACCTACTCCATAATTGCCTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp AAATATGTATGGCTTAGGTCTAAGCCCACTATCTCATATCTGAAGAATTACGTTTCTCGCTCACGAATGTaGTTAGCAACAATCCTTTCC +
Preference number: 4 (lower is better)
Translates to: KYVWLRSKPTISYLKNYVSRSRM*LATILS
Trigger: GGAAAGGATTGTTGCTAACCACATTCGTGAGCGAGA...AACGTAATTCTTCAGATATGAGATAGTGGGCTTAGACCTAAGCCATACATATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp TATAAAGCCTCTAAAAGGTTAGCAGTTTCTGAGTCAAACCCCAAAGGTTTGACAATCAATAGCAATACCTaGTCCTTTGTCTTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: YKASKRLAVSESNPKGLTINSNT*SFVFPS
Trigger: AGAAGGGAAGACAAAGGACCAGGTATTGCTATTGAT...TGTCAAACCTTTGGGGTTTGACTCAGAAACTGCTAACCTTTTAGAGGCTTTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp GAAAAGAAATATGTATGGCTTAGGTCTAAGCCCACTATCTCATATCTGAAGAATTTCAATACCCTTTTCTaGAGTGACCTGGATAGGGAC +
Preference number: 4 (lower is better)
Translates to: EKKYVWLRSKPTISYLKNFNTLF*SDLDRD
Trigger: GTCCCTATCCAGGTCACTCCAGAAAAGGGTATTGAA...ATTCTTCAGATATGAGATAGTGGGCTTAGACCTAAGCCATACATATTTCTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp AATGCATTAGTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCGACTACTCAATGGCACTCAACATaGCAAGTTCTCTGTTTAATA +
Preference number: 4 (lower is better)
Translates to: NALVKLVTCLLMSTHATTQWHST*QVLCLI
Trigger: TATTAAACAGAGAACTTGCCATGTTGAGTGCCATTG...AGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTACTAATGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp AAATATGTATGGCTTAGGTCTAAGCCCACTATCTCATATCTGAAGAATTACGTTGGGGCAGTGCAACTGTaGGACTATAATCTAAAAGCA +
Preference number: 4 (lower is better)
Translates to: KYVWLRSKPTISYLKNYVGAVQL*DYNLKA
Trigger: TGCTTTTAGATTATAGTCCCACAGTTGCACTGCCCC...AACGTAATTCTTCAGATATGAGATAGTGGGCTTAGACCTAAGCCATACATATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp GCACGTCAAACTATGCACATACTAGAGTTTCAGACTTCATTCAACATTGGCATCGACTTCATTCAACATTaGCATCTCCTTTTAGCAGAA +
Preference number: 4 (lower is better)
Translates to: ARQTMHILEFQTSFNIGIDFIQH*HLLLAE
Trigger: TTCTGCTAAAAGGAGATGCCAATGTTGAATGAAGTC...GATGCCAATGTTGAATGAAGTCTGAAACTCTAGTATGTGCATAGTTTGACGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp AGCGATGAATGCATTAGTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCTGTTACCACATGTTATaGCAGATCATTCAAAGCTAT +
Preference number: 4 (lower is better)
Translates to: SDECISKTGYLPTDVHTCCYHML*QIIQSY
Trigger: ATAGCTTTGAATGATCTGCCATAACATGTGGTAACA...GCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTACTAATGCATTCATCGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp AAATATGTATGGCTTAGGTCTAAGCCCACTATCTCATATCTGAAGAATTACGTTATGGTTCTCAGACCTTaGGGATCAACTTCTTTAGCT +
Preference number: 4 (lower is better)
Translates to: KYVWLRSKPTISYLKNYVMVLRP*GSTSLA
Trigger: AGCTAAAGAAGTTGATCCTCAAGGTCTGAGAACCAT...AACGTAATTCTTCAGATATGAGATAGTGGGCTTAGACCTAAGCCATACATATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp TTCAGACTTCATTCAACATTGGCATCTCCTTTTAGCAGAATACAAACCCTTTGGTTGGGTCTTCTGGTTTaGAATTTTTGTAGGCTTCTA +
Preference number: 4 (lower is better)
Translates to: FRLHSTLASPFSRIQTLWLGLLV*NFCRLL
Trigger: TAGAAGCCTACAAAAATTTCAAACCAGAAGACCCAA...CCAAAGGGTTTGTATTCTGCTAAAAGGAGATGCCAATGTTGAATGAAGTCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp CAAAACACAAAACCACATTTAGCACAAAGCCAAACCCTGAAGTATATAATCCGTCTTCATGGTTGGTGTTaGTGTAAGAGACTTGAATGT +
Preference number: 4 (lower is better)
Translates to: QNTKPHLAQSQTLKYIIRLHGWC*CKRLEC
Trigger: ACATTCAAGTCTCTTACATCAACACCAACCATGAAG...ACGGATTATATACTTCAGGGTTTGGCTTTGTGCTAAATGTGGTTTTGTGTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp AAATATGTATGGCTTAGGTCTAAGCCCACTATCTCATATCTGAAGAATTACGTTGCTTCTTTCAGTGCTTaGTACATTCGAAGCATCTCA +
Preference number: 4 (lower is better)
Translates to: KYVWLRSKPTISYLKNYVASFSA*YIRSIS
Trigger: TGAGATGCTTCGAATGTATCAAGCACTGAAAGAAGC...AACGTAATTCTTCAGATATGAGATAGTGGGCTTAGACCTAAGCCATACATATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp CGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGCTTTCGCATAATTACATGCGACTACTCATaGTTTACTGCAACGGTTATC +
Preference number: 4 (lower is better)
Translates to: RLLMIYCNGYQICCFRIITCDYS*FTATVI
Trigger: GATAACCGTTGCAGTAAATCATGAGTAGTCGCATGT...AATTATGCGAAAGCAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp AAATATGTATGGCTTAGGTCTAAGCCCACTATCTCATATCTGAAGAATTACGTTAGGTTTGACATACCATaGGCAATGAAGATGAGCGAT +
Preference number: 4 (lower is better)
Translates to: KYVWLRSKPTISYLKNYVRFDIP*AMKMSD
Trigger: ATCGCTCATCTTCATTGCTCATGGTATGTCAAACCT...AACGTAATTCTTCAGATATGAGATAGTGGGCTTAGACCTAAGCCATACATATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp CTATGGACATTACCATGTTGTCATGGTAATTATGAGCTTTGTACCTCTCAAAATAGGTTTGACATACCATaGGCAATGAAGATGAGCGAT +
Preference number: 4 (lower is better)
Translates to: LWTLPCCHGNYELCTSQNRFDIP*AMKMSD
Trigger: ATCGCTCATCTTCATTGCTCATGGTATGTCAAACCT...ATTTTGAGAGGTACAAAGCTCATAATTACCATGACAACATGGTAATGTCCATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp GAAAAGAAATATGTATGGCTTAGGTCTAAGCCCACTATCTCATATCTGAAGAATCAAACCCCAAAGGTTTaGCATACCATGAGCAATGAA +
Preference number: 4 (lower is better)
Translates to: EKKYVWLRSKPTISYLKNQTPKV*HTMSNE
Trigger: TTCATTGCTCATGGTATGTCAAACCTTTGGGGTTTG...ATTCTTCAGATATGAGATAGTGGGCTTAGACCTAAGCCATACATATTTCTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp GAATTACGTTTAATGAGCTACCTGGTAGATAGCCTAGAAAACTTGTCCAAAGCAACCAATATACCAGTATaGACAGGTCTTAAGACAAAC +
Preference number: 4 (lower is better)
Translates to: ELRLMSYLVDSLENLSKATNIPV*TGLKTN
Trigger: GTTTGTCTTAAGACCTGTTCATACTGGTATATTGGT...TGCTTTGGACAAGTTTTCTAGGCTATCTACCAGGTAGCTCATTAAACGTAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp ATAGGCAATTATGGAGTAGGTAGTAGCATTAATGGTAGACAACAGAATTACTGTTTAGAAGTAACAAGCTaGAGCACAAGAGGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: IGNYGVGSSINGRQQNYCLEVTS*STRGRL
Trigger: AAGACGACCTCTTGTGCTGCAGCTTGTTACTTCTAA...ACAGTAATTCTGTTGTCTACCATTAATGCTACTACCTACTCCATAATTGCCTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp TTCAGACTTCATTCAACATTGGCATCTCCTTTTAGCAGAATACAAACCCTTTGGAAACTCGGCATATTCTaGTTTAGAAGTAACAAGCTG +
Preference number: 4 (lower is better)
Translates to: FRLHSTLASPFSRIQTLWKLGIF*FRSNKL
Trigger: CAGCTTGTTACTTCTAAAGCAGAATATGCCGAGTTT...CCAAAGGGTTTGTATTCTGCTAAAAGGAGATGCCAATGTTGAATGAAGTCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp CACTATCTCATATCTGAAGAATTACGTTTAATGAGCTACCTGGTAGATAGCCTATGGGTATGGAGGAAATaGCTTTATTCATTCCAGTCA +
Preference number: 4 (lower is better)
Translates to: HYLISEELRLMSYLVDSLWVWRK*LYSFQS
Trigger: TGACTGGAATGAATAAAGGCATTTCCTCCATACCCA...TAGGCTATCTACCAGGTAGCTCATTAAACGTAATTCTTCAGATATGAGATAGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp AATGCATTAGTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCGACTACTCATGGAAAAGTTTTCTaGTTGTCCATTCTCATCATT +
Preference number: 4 (lower is better)
Translates to: NALVKLVTCLLMSTHATTHGKVF*LSILII
Trigger: AATGATGAGAATGGACAAGCAGAAAACTTTTCCATG...AGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTACTAATGCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp GAATTACGTTTAATGAGCTACCTGGTAGATAGCCTAGAAAACTTGTCCAAAGCATTGCAAACTACCTCGTaGTTCTGGAAAAGTTTATTC +
Preference number: 4 (lower is better)
Translates to: ELRLMSYLVDSLENLSKALQTTS*FWKSLF
Trigger: GAATAAACTTTTCCAGAAGCACGAGGTAGTTTGCAA...TGCTTTGGACAAGTTTTCTAGGCTATCTACCAGGTAGCTCATTAAACGTAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp TTCAGACTTCATTCAACATTGGCATCTCCTTTTAGCAGAATACAAACCCTTTGGTACTTTATGAGTATCTaGTCTGGGTGTAAACTACAC +
Preference number: 4 (lower is better)
Translates to: FRLHSTLASPFSRIQTLWYFMSI*SGCKLH
Trigger: GTGTAGTTTACACCCAGAGCAGATACTCATAAAGTA...CCAAAGGGTTTGTATTCTGCTAAAAGGAGATGCCAATGTTGAATGAAGTCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp GAATTACGTTTAATGAGCTACCTGGTAGATAGCCTAGAAAACTTGTCCAAAGCATACTTTATGAGTATCTaGTCTGGGTGTAAACTACAC +
Preference number: 4 (lower is better)
Translates to: ELRLMSYLVDSLENLSKAYFMSI*SGCKLH
Trigger: GTGTAGTTTACACCCAGAGCAGATACTCATAAAGTA...TGCTTTGGACAAGTTTTCTAGGCTATCTACCAGGTAGCTCATTAAACGTAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp TATAGGATGACAAGTATAGCATGCAATGGCATAAAGAGGTCTATGTGTGAGTTAGCACTTGCTATCTTCTaGCAAGAATACTCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: YRMTSIACNGIKRSMCELALAIF*QEYSSS
Trigger: TGAAGAAGAGTATTCTTGGCAGAAGATAGCAAGTGC...TAACTCACACATAGACCTCTTTATGCCATTGCATGCTATACTTGTCATCCTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR GCA 90 bp TATAGGATGACAAGTATAGCATGCAATGGCATAAAGAGGTCTATGTGTGAGTTAGCTTGGTTTTGCACTTaGTATCTTCTGCCAAGAATA +
Preference number: 4 (lower is better)
Translates to: YRMTSIACNGIKRSMCELAWFCT*YLLPRI
Trigger: TATTCTTGGCAGAAGATAGCAAGTGCAAAACCAAGC...TAACTCACACATAGACCTCTTTATGCCATTGCATGCTATACTTGTCATCCTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR CCA 90 bp GAAAAGAAATATGTATGGCTTAGGTCTAAGCCCACTATCTCATATCTGAAGAATCTACTTCATGTTCTATaGAGAGCAACTGTCCCTGTA +
Preference number: 4 (lower is better)
Translates to: EKKYVWLRSKPTISYLKNLLHVL*RATVPV
Trigger: TACAGGGACAGTTGCTCTCCATAGAACATGAAGTAG...ATTCTTCAGATATGAGATAGTGGGCTTAGACCTAAGCCATACATATTTCTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp AAATATGTATGGCTTAGGTCTAAGCCCACTATCTCATATCTGAAGAATTACGTTTTCAAATGCCATGTCTaGAGTAAACAACCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: KYVWLRSKPTISYLKNYVFKCHV*SKQPCP
Trigger: AGGACAGGGTTGTTTACTCCAGACATGGCATTTGAA...AACGTAATTCTTCAGATATGAGATAGTGGGCTTAGACCTAAGCCATACATATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp CTATACAAACCTACCTTGGTCAGTACAACATATAAAGCCTCTAAAAGGTTAGCAATCAATAGCAATACCTaGTCCTTTGTCTTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: LYKPTLVSTTYKASKRLAINSNT*SFVFPS
Trigger: AGAAGGGAAGACAAAGGACCAGGTATTGCTATTGAT...TGCTAACCTTTTAGAGGCTTTATATGTTGTACTGACCAAGGTAGGTTTGTATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp CGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGCTTTCGCATAATTTTGCCTCTCCAATTGTaGGTCCATGGAAAAGTTTTC +
Preference number: 4 (lower is better)
Translates to: RLLMIYCNGYQICCFRIILPLQL*VHGKVF
Trigger: GAAAACTTTTCCATGGACCCACAATTGGAGAGGCAA...AATTATGCGAAAGCAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp ATAGGGCTGCTATACAAACCTACCTTGGTCAGTACAACATATAAAGCCTCTAAAGAAAAGAAATATGTATaGCTTAGGTCTAAGCCCACT +
Preference number: 4 (lower is better)
Translates to: IGLLYKPTLVSTTYKASKEKKYV*LRSKPT
Trigger: AGTGGGCTTAGACCTAAGCCATACATATTTCTTTTC...TTTAGAGGCTTTATATGTTGTACTGACCAAGGTAGGTTTGTATAGCAGCCCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp TATAAAGCCTCTAAAAGGTTAGCAGTTTCTGAGTCAAACCCCAAAGGTTTGACAGAAAAGAAATATGTATaGCTTAGGTCTAAGCCCACT +
Preference number: 4 (lower is better)
Translates to: YKASKRLAVSESNPKGLTEKKYV*LRSKPT
Trigger: AGTGGGCTTAGACCTAAGCCATACATATTTCTTTTC...TGTCAAACCTTTGGGGTTTGACTCAGAAACTGCTAACCTTTTAGAGGCTTTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp CTATGGACATTACCATGTTGTCATGGTAATTATGAGCTTTGTACCTCTCAAAATATTCCAGTTGGCTTCTaGCTGTTTCCTACATGTGAA +
Preference number: 4 (lower is better)
Translates to: LWTLPCCHGNYELCTSQNIPVGF*LFPTCE
Trigger: TTCACATGTAGGAAACAGCCAGAAGCCAACTGGAAT...ATTTTGAGAGGTACAAAGCTCATAATTACCATGACAACATGGTAATGTCCATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp CGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGCTTTCGCATAATTGTTTACCTGAAAAAGTaGATGACCTACCTCCAAGGT +
Preference number: 4 (lower is better)
Translates to: RLLMIYCNGYQICCFRIIVYLKK*MTYLQG
Trigger: ACCTTGGAGGTAGGTCATCCACTTTTTCAGGTAAAC...AATTATGCGAAAGCAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp ATTCCAATTAGAGATCTTAAAGATAGGTCTCCAGAGGTTTTACTTCTTACCGAAGTTTACCTGAAAAAGTaGATGACCTACCTCCAAGGT +
Preference number: 4 (lower is better)
Translates to: IPIRDLKDRSPEVLLLTEVYLKK*MTYLQG
Trigger: ACCTTGGAGGTAGGTCATCCACTTTTTCAGGTAAAC...TTCGGTAAGAAGTAAAACCTCTGGAGACCTATCTTTAAGATCTCTAATTGGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp GGAGTAGGTAGTAGCATTAATGGTAGACAACAGAATTACTGTCATCCTAAACAGAGCAGACAAGGCAAGTaGTTAGACAGAGTAATTTTT +
Preference number: 4 (lower is better)
Translates to: GVGSSINGRQQNYCHPKQSRQGK*LDRVIF
Trigger: AAAAATTACTCTGTCTAACCACTTGCCTTGTCTGCT...CTGTTTAGGATGACAGTAATTCTGTTGTCTACCATTAATGCTACTACCTACTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp TTCAGACTTCATTCAACATTGGCATCTCCTTTTAGCAGAATACAAACCCTTTGGAGCAGACAAGGCAAGTaGTTAGACAGAGTAATTTTT +
Preference number: 4 (lower is better)
Translates to: FRLHSTLASPFSRIQTLWSRQGK*LDRVIF
Trigger: AAAAATTACTCTGTCTAACCACTTGCCTTGTCTGCT...CCAAAGGGTTTGTATTCTGCTAAAAGGAGATGCCAATGTTGAATGAAGTCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp TATAGGATGACAAGTATAGCATGCAATGGCATAAAGAGGTCTATGTGTGAGTTAGAATGTAAATATAAGTaGTGTGACACAACAGCCCTG +
Preference number: 4 (lower is better)
Translates to: YRMTSIACNGIKRSMCELECKYK*CDTTAL
Trigger: CAGGGCTGTTGTGTCACACCACTTATATTTACATTC...TAACTCACACATAGACCTCTTTATGCCATTGCATGCTATACTTGTCATCCTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR TCA 90 bp CTATACAAACCTACCTTGGTCAGTACAACATATAAAGCCTCTAAAAGGTTAGCACATATGCTTCTAGCATaGAGCAAAACACATTGGAAT +
Preference number: 4 (lower is better)
Translates to: LYKPTLVSTTYKASKRLAHMLLA*SKTHWN
Trigger: ATTCCAATGTGTTTTGCTTCATGCTAGAAGCATATG...TGCTAACCTTTTAGAGGCTTTATATGTTGTACTGACCAAGGTAGGTTTGTATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp CAAAACACAAAACCACATTTAGCACAAAGCCAAACCCTGAAGTATATAATCCGTGTCCCATTTCATATTTaGGAATTATGGCTACAGTCT +
Preference number: 4 (lower is better)
Translates to: QNTKPHLAQSQTLKYIIRVPFHI*ELWLQS
Trigger: AGACTGTAGCCATAATTCTCAAATATGAAATGGGAC...ACGGATTATATACTTCAGGGTTTGGCTTTGTGCTAAATGTGGTTTTGTGTTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp CAAAACACAAAACCACATTTAGCACAAAGCCAAACCCTGAAGTATATAATCCGTTTGTACCTCTCAAAATaGCTACAATCTGGAGTTAGA +
Preference number: 4 (lower is better)
Translates to: QNTKPHLAQSQTLKYIIRLYLSK*LQSGVR
Trigger: TCTAACTCCAGATTGTAGTCATTTTGAGAGGTACAA...ACGGATTATATACTTCAGGGTTTGGCTTTGTGCTAAATGTGGTTTTGTGTTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp GAAAAGAAATATGTATGGCTTAGGTCTAAGCCCACTATCTCATATCTGAAGAATCACTATCTTCTTTCATaGGTTCAACAGTTAGAGACC +
Preference number: 4 (lower is better)
Translates to: EKKYVWLRSKPTISYLKNHYLLS*VQQLET
Trigger: GGTCTCTAACTGTTGAACTCATGAAAGAAGATAGTG...ATTCTTCAGATATGAGATAGTGGGCTTAGACCTAAGCCATACATATTTCTTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp CTATGGACATTACCATGTTGTCATGGTAATTATGAGCTTTGTACCTCTCAAAATCACTATCTTCTTTCATaGGTTCAACAGTTAGAGACC +
Preference number: 4 (lower is better)
Translates to: LWTLPCCHGNYELCTSQNHYLLS*VQQLET
Trigger: GGTCTCTAACTGTTGAACTCATGAAAGAAGATAGTG...ATTTTGAGAGGTACAAAGCTCATAATTACCATGACAACATGGTAATGTCCATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp TATAGGATGACAAGTATAGCATGCAATGGCATAAAGAGGTCTATGTGTGAGTTAAAACAAACTTTGTCTTaGGCTGAGATTGCATATGTG +
Preference number: 4 (lower is better)
Translates to: YRMTSIACNGIKRSMCELKQTLS*AEIAYV
Trigger: CACATATGCAATCTCAGCTCAAGACAAAGTTTGTTT...TAACTCACACATAGACCTCTTTATGCCATTGCATGCTATACTTGTCATCCTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR GCA 90 bp CTATACAAACCTACCTTGGTCAGTACAACATATAAAGCCTCTAAAAGGTTAGCAAAACTCGGCATATTCTaGTTTAGAAGTAACAAGCTG +
Preference number: 4 (lower is better)
Translates to: LYKPTLVSTTYKASKRLAKLGIF*FRSNKL
Trigger: CAGCTTGTTACTTCTAAAGCAGAATATGCCGAGTTT...TGCTAACCTTTTAGAGGCTTTATATGTTGTACTGACCAAGGTAGGTTTGTATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp ATAGGCAATTATGGAGTAGGTAGTAGCATTAATGGTAGACAACAGAATTACTGTTGGGTATGGAGGAAATaGCTTTATTCATTCCAGTCA +
Preference number: 4 (lower is better)
Translates to: IGNYGVGSSINGRQQNYCWVWRK*LYSFQS
Trigger: TGACTGGAATGAATAAAGGCATTTCCTCCATACCCA...ACAGTAATTCTGTTGTCTACCATTAATGCTACTACCTACTCCATAATTGCCTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp AAATATGTATGGCTTAGGTCTAAGCCCACTATCTCATATCTGAAGAATTACGTTTCCCTCGTGATGAACTaGATAATCATTTCTCTGATC +
Preference number: 4 (lower is better)
Translates to: KYVWLRSKPTISYLKNYVSLVMN*IIISLI
Trigger: GATCAGAGAAATGATTATGCAGTTCATCACGAGGGA...AACGTAATTCTTCAGATATGAGATAGTGGGCTTAGACCTAAGCCATACATATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp GAAAAGAAATATGTATGGCTTAGGTCTAAGCCCACTATCTCATATCTGAAGAATGACTATCGCTTCAAATaGCATGTCTGGAGTAAACAA +
Preference number: 4 (lower is better)
Translates to: EKKYVWLRSKPTISYLKNDYRFK*HVWSKQ
Trigger: TTGTTTACTCCAGACATGGCATTTGAAGCGATAGTC...ATTCTTCAGATATGAGATAGTGGGCTTAGACCTAAGCCATACATATTTCTTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp CACTATCTCATATCTGAAGAATTACGTTTAATGAGCTACCTGGTAGATAGCCTACTCTGTATTAAAGAGTaGAAAGATGTGCTTGCTAGA +
Preference number: 4 (lower is better)
Translates to: HYLISEELRLMSYLVDSLLCIKE*KDVLAR
Trigger: TCTAGCAAGCACATCTTTGCACTCTTTAATACAGAG...TAGGCTATCTACCAGGTAGCTCATTAAACGTAATTCTTCAGATATGAGATAGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp CTATACAAACCTACCTTGGTCAGTACAACATATAAAGCCTCTAAAAGGTTAGCATCATTAGTGATTAATTaGCATGCCAGACACTTCGTT +
Preference number: 4 (lower is better)
Translates to: LYKPTLVSTTYKASKRLASLVIN*HARHFV
Trigger: AACGAAGTGTCTGGCATGGCAATTAATCACTAATGA...TGCTAACCTTTTAGAGGCTTTATATGTTGTACTGACCAAGGTAGGTTTGTATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp CACTATCTCATATCTGAAGAATTACGTTTAATGAGCTACCTGGTAGATAGCCTATCATTAGTGATTAATTaGCATGCCAGACACTTCGTT +
Preference number: 4 (lower is better)
Translates to: HYLISEELRLMSYLVDSLSLVIN*HARHFV
Trigger: AACGAAGTGTCTGGCATGGCAATTAATCACTAATGA...TAGGCTATCTACCAGGTAGCTCATTAAACGTAATTCTTCAGATATGAGATAGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp ATGTCCACACATGCGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGAAGATGAGCGATGAATaGATTAGTAAAACTGGTTAC +
Preference number: 4 (lower is better)
Translates to: MSTHATTHDLLQRLSNMLKMSDE*ISKTGY
Trigger: GTAACCAGTTTTACTAATGCATTCATCGCTCATCTT...CAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCGCATGTGTGGACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp CTATGGACATTACCATGTTGTCATGGTAATTATGAGCTTTGTACCTCTCAAAATGGGACTTTGAAATACTaGAACTGTAAAAGTGTGAGC +
Preference number: 4 (lower is better)
Translates to: LWTLPCCHGNYELCTSQNGTLKY*NCKSVS
Trigger: GCTCACACTTTTACAGTTGCAGTATTTCAAAGTCCC...ATTTTGAGAGGTACAAAGCTCATAATTACCATGACAACATGGTAATGTCCATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp AAATATGTATGGCTTAGGTCTAAGCCCACTATCTCATATCTGAAGAATTACGTTGCCATTGTTTATTACTaGCTAAGATCAGTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: KYVWLRSKPTISYLKNYVAIVYY*LRSVEG
Trigger: TCCTTCCACTGATCTTAGGCAGTAATAAACAATGGC...AACGTAATTCTTCAGATATGAGATAGTGGGCTTAGACCTAAGCCATACATATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp CAAAACACAAAACCACATTTAGCACAAAGCCAAACCCTGAAGTATATAATCCGTTTTGGTCTTCCTTGTTaGGTCTTCTGGTTTGAAATT +
Preference number: 4 (lower is better)
Translates to: QNTKPHLAQSQTLKYIIRFGLPC*VFWFEI
Trigger: AATTTCAAACCAGAAGACCCAACAAGGAAGACCAAA...ACGGATTATATACTTCAGGGTTTGGCTTTGTGCTAAATGTGGTTTTGTGTTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp ATAGGCAATTATGGAGTAGGTAGTAGCATTAATGGTAGACAACAGAATTACTGTTCCATCAGGGTATTTTaGTCCTCTGAAGAATACAAC +
Preference number: 4 (lower is better)
Translates to: IGNYGVGSSINGRQQNYCSIRVF*SSEEYN
Trigger: GTTGTATTCTTCAGAGGACCAAAATACCCTGATGGA...ACAGTAATTCTGTTGTCTACCATTAATGCTACTACCTACTCCATAATTGCCTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp CTATACAAACCTACCTTGGTCAGTACAACATATAAAGCCTCTAAAAGGTTAGCAGAAAAGAAATATGTATaGCTTAGGTCTAAGCCCACT +
Preference number: 4 (lower is better)
Translates to: LYKPTLVSTTYKASKRLAEKKYV*LRSKPT
Trigger: AGTGGGCTTAGACCTAAGCCATACATATTTCTTTTC...TGCTAACCTTTTAGAGGCTTTATATGTTGTACTGACCAAGGTAGGTTTGTATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp GCAATGAAGATGAGCGATGAATGCATTAGTAAAACTGGTTACTTGCCTACTGATATAAGTTCAATACAATaGCACTCAACATGGCAAGTT +
Preference number: 4 (lower is better)
Translates to: AMKMSDECISKTGYLPTDISSIQ*HSTWQV
Trigger: AACTTGCCATGTTGAGTGCCATTGTATTGAACTTAT...ATCAGTAGGCAAGTAACCAGTTTTACTAATGCATTCATCGCTCATCTTCATTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp GAATTACGTTTAATGAGCTACCTGGTAGATAGCCTAGAAAACTTGTCCAAAGCAATAAGTTCAATACAATaGCACTCAACATGGCAAGTT +
Preference number: 4 (lower is better)
Translates to: ELRLMSYLVDSLENLSKAISSIQ*HSTWQV
Trigger: AACTTGCCATGTTGAGTGCCATTGTATTGAACTTAT...TGCTTTGGACAAGTTTTCTAGGCTATCTACCAGGTAGCTCATTAAACGTAATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp ATGTCCACACATGCGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGCTAAGAACACACCAGTaGTTATTCACAATATTTTCC +
Preference number: 4 (lower is better)
Translates to: MSTHATTHDLLQRLSNMLLRTHQ*LFTIFS
Trigger: GGAAAATATTGTGAATAACCACTGGTGTGTTCTTAG...CAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCGCATGTGTGGACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp ATAGGCAATTATGGAGTAGGTAGTAGCATTAATGGTAGACAACAGAATTACTGTTTGGGTCTTCTGGTTTaGAATTTTTGTAGGCTTCTA +
Preference number: 4 (lower is better)
Translates to: IGNYGVGSSINGRQQNYCLGLLV*NFCRLL
Trigger: TAGAAGCCTACAAAAATTTCAAACCAGAAGACCCAA...ACAGTAATTCTGTTGTCTACCATTAATGCTACTACCTACTCCATAATTGCCTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp CTATGGACATTACCATGTTGTCATGGTAATTATGAGCTTTGTACCTCTCAAAATTACTTCTGTAGAATATaGAATAGTGTCATGGGACAC +
Preference number: 4 (lower is better)
Translates to: LWTLPCCHGNYELCTSQNYFCRI*NSVMGH
Trigger: GTGTCCCATGACACTATTTCATATTCTACAGAAGTA...ATTTTGAGAGGTACAAAGCTCATAATTACCATGACAACATGGTAATGTCCATAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp GAAAAGAAATATGTATGGCTTAGGTCTAAGCCCACTATCTCATATCTGAAGAATGTCCCATTTCATATTTaGGAATTATGGCTACAGTCT +
Preference number: 4 (lower is better)
Translates to: EKKYVWLRSKPTISYLKNVPFHI*ELWLQS
Trigger: AGACTGTAGCCATAATTCTCAAATATGAAATGGGAC...ATTCTTCAGATATGAGATAGTGGGCTTAGACCTAAGCCATACATATTTCTTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR TCA 90 bp AAATATGTATGGCTTAGGTCTAAGCCCACTATCTCATATCTGAAGAATTACGTTCTTTATTCTTCATTCTaGGGAGATTCCTGTCACTTT +
Preference number: 4 (lower is better)
Translates to: KYVWLRSKPTISYLKNYVLYSSF*GDSCHF
Trigger: AAAGTGACAGGAATCTCCTCAGAATGAAGAATAAAG...AACGTAATTCTTCAGATATGAGATAGTGGGCTTAGACCTAAGCCATACATATTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp GAAAAGAAATATGTATGGCTTAGGTCTAAGCCCACTATCTCATATCTGAAGAATAAACTCGGCATATTCTaGTTTAGAAGTAACAAGCTG +
Preference number: 4 (lower is better)
Translates to: EKKYVWLRSKPTISYLKNKLGIF*FRSNKL
Trigger: CAGCTTGTTACTTCTAAAGCAGAATATGCCGAGTTT...ATTCTTCAGATATGAGATAGTGGGCTTAGACCTAAGCCATACATATTTCTTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp ATAGGCAATTATGGAGTAGGTAGTAGCATTAATGGTAGACAACAGAATTACTGTTCATTAGTGATTAATTaGCATGCCAGACACTTCGTT +
Preference number: 4 (lower is better)
Translates to: IGNYGVGSSINGRQQNYCSLVIN*HARHFV
Trigger: AACGAAGTGTCTGGCATGGCAATTAATCACTAATGA...ACAGTAATTCTGTTGTCTACCATTAATGCTACTACCTACTCCATAATTGCCTAT
36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp GAAAAGAAATATGTATGGCTTAGGTCTAAGCCCACTATCTCATATCTGAAGAATTTTGGTCTTCCTTGTTaGGTCTTCTGGTTTGAAATT +
Preference number: 4 (lower is better)
Translates to: EKKYVWLRSKPTISYLKNFGLPC*VFWFEI
Trigger: AATTTCAAACCAGAAGACCCAACAAGGAAGACCAAA...ATTCTTCAGATATGAGATAGTGGGCTTAGACCTAAGCCATACATATTTCTTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp CTATGGACATTACCATGTTGTCATGGTAATTATGAGCTTTGTACCTCTCAAAATGACTTCATTCAACATTaGCATCTCCTTTTAGCAGAA +
Preference number: 4 (lower is better)
Translates to: LWTLPCCHGNYELCTSQNDFIQH*HLLLAE
Trigger: TTCTGCTAAAAGGAGATGCCAATGTTGAATGAAGTC...ATTTTGAGAGGTACAAAGCTCATAATTACCATGACAACATGGTAATGTCCATAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp CGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGCTTTCGCATAATTCATGGAAAAGTTTTCTaGTTGTCCATTCTCATCATT +
Preference number: 4 (lower is better)
Translates to: RLLMIYCNGYQICCFRIIHGKVF*LSILII
Trigger: AATGATGAGAATGGACAAGCAGAAAACTTTTCCATG...AATTATGCGAAAGCAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp GAAAAGAAATATGTATGGCTTAGGTCTAAGCCCACTATCTCATATCTGAAGAATAAGATGAGCGATGAATaGATTAGTAAAACTGGTTAC +
Preference number: 4 (lower is better)
Translates to: EKKYVWLRSKPTISYLKNKMSDE*ISKTGY
Trigger: GTAACCAGTTTTACTAATGCATTCATCGCTCATCTT...ATTCTTCAGATATGAGATAGTGGGCTTAGACCTAAGCCATACATATTTCTTTTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR GCA 90 bp ATAGGCAATTATGGAGTAGGTAGTAGCATTAATGGTAGACAACAGAATTACTGTAAGATGAGCGATGAATaGATTAGTAAAACTGGTTAC +
Preference number: 4 (lower is better)
Translates to: IGNYGVGSSINGRQQNYCKMSDE*ISKTGY
Trigger: GTAACCAGTTTTACTAATGCATTCATCGCTCATCTT...ACAGTAATTCTGTTGTCTACCATTAATGCTACTACCTACTCCATAATTGCCTAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp ATTCCAATTAGAGATCTTAAAGATAGGTCTCCAGAGGTTTTACTTCTTACCGAACTAAGAACACACCAGTaGTTATTCACAATATTTTCC +
Preference number: 4 (lower is better)
Translates to: IPIRDLKDRSPEVLLLTELRTHQ*LFTIFS
Trigger: GGAAAATATTGTGAATAACCACTGGTGTGTTCTTAG...TTCGGTAAGAAGTAAAACCTCTGGAGACCTATCTTTAAGATCTCTAATTGGAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CCA 90 bp AAATATGTATGGCTTAGGTCTAAGCCCACTATCTCATATCTGAAGAATTACGTTTGTTACCACATGTTATaGCAGATCATTCAAAGCTAT +
Preference number: 4 (lower is better)
Translates to: KYVWLRSKPTISYLKNYVCYHML*QIIQSY
Trigger: ATAGCTTTGAATGATCTGCCATAACATGTGGTAACA...AACGTAATTCTTCAGATATGAGATAGTGGGCTTAGACCTAAGCCATACATATTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS TCA 90 bp CCCGAGGGGCCGGCGACCAGCTGGTCCCTGCTCGCCTCTACGACCTaGCAGGGAGTAGGGGCCGCGCTGCCCTGGCTGCTGCTGCTGCGC +
Preference number: 5 (lower is better)
Translates to: PEGPATSWSLLASTT*QGVGAALPWLLLLR
Trigger: GCGCAGCAGCAGCAGCCAGGGCAGCGCGGCCCCTACTCCCTGTCAGGTCGTAGAGGCGAGCAGGGACCAGCTGGTCGCCGGCCCCTCGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000367733.6
ENST00000520906.5
ENST00000627582.3
CDS CCA 90 bp GGGGGCCAGGAGAGGGAATGGCAGGAGCTGGTCCTCGGCCGGATGTaGGCCTTGCGAGGGGAGCACTTAGTGTTGGCCTCCTTTGGGTTG +
Preference number: 5 (lower is better)
Translates to: GGQEREWQELVLGRM*ALRGEHLVLASFGL
Trigger: CAACCCAAAGGAGGCCAACACTAAGTGCTCCCCTCGCAAGGCCCACATCCGGCCGAGGACCAGCTCCTGCCATTCCCTCTCCTGGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000485254.2
ENST00000491124.1
ENST00000627582.3
CDS CCA 90 bp CCGGATGTGGGCCTTGCGAGGGGAGCACTTAGTGTTGGCCTCCTTTaGGTTGTGGGGCTTGGAGGAGGTGACCTGCGAGAGTGCTGTATC +
Preference number: 5 (lower is better)
Translates to: PDVGLARGALSVGLL*VVGLGGGDLRECCI
Trigger: GATACAGCACTCTCGCAGGTCACCTCCTCCAAGCCCCACAACCCAAAGGAGGCCAACACTAAGTGCTCCCCTCGCAAGGCCCACATCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000485254.2
ENST00000491124.1
ENST00000627582.3
CDS-3UTR CAA 90 bp ACCCAGGAACATGTCAATGCTGAGATGCCTGGAATTCATCTTCATAAGTCCTCTTCCCGGTTCCCCATCTaGCCCGAGGGGCCGGCGACC +
Preference number: 5 (lower is better)
Translates to: TQEHVNAEMPGIHLHKSSSRFPI*PEGPAT
Trigger: GGTCGCCGGCCCCTCGGGCAAGATGGGGAACCGGGA...AGAGGACTTATGAAGATGAATTCCAGGCATCTCAGCATTGACATGTTCCTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR CAA 90 bp CACATGCGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGCTTTCGCGGGGTGGTCTCCGGCTaGGGACACTGGGCGGGGCCC +
Preference number: 5 (lower is better)
Translates to: HMRLLMIYCNGYQICCFRGVVSG*GHWAGP
Trigger: GGGCCCCGCCCAGTGTCCCAAGCCGGAGACCACCCC...GCGAAAGCAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCGCATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp CACATGCGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGCTTTCGCTCCCGGTTCCCCATCTaGCCCGAGGGGCCGGCGACC +
Preference number: 5 (lower is better)
Translates to: HMRLLMIYCNGYQICCFRSRFPI*PEGPAT
Trigger: GGTCGCCGGCCCCTCGGGCAAGATGGGGAACCGGGA...GCGAAAGCAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCGCATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp GGAGTAGGTAGTAGCATTAATGGTAGACAACAGAATTACTGTCATCCTAAACAGGGGGTGGTCTCCGGCTaGGGACACTGGGCGGGGCCC +
Preference number: 5 (lower is better)
Translates to: GVGSSINGRQQNYCHPKQGVVSG*GHWAGP
Trigger: GGGCCCCGCCCAGTGTCCCAAGCCGGAGACCACCCC...CTGTTTAGGATGACAGTAATTCTGTTGTCTACCATTAATGCTACTACCTACTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp AAAATTCCAGTTGGCTTCTGGCTGTTTCCTACATGTGAATCATCTGGTCCTTGGGGCCGGATGTGGGCCTaGCGAGGGGAGCACTTAGTG +
Preference number: 5 (lower is better)
Translates to: KIPVGFWLFPTCESSGPWGRMWA*RGEHLV
Trigger: CACTAAGTGCTCCCCTCGCAAGGCCCACATCCGGCC...CCAAGGACCAGATGATTCACATGTAGGAAACAGCCAGAAGCCAACTGGAATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp CAAAACACAAAACCACATTTAGCACAAAGCCAAACCCTGAAGTATATAATCCGTGGGGTGGTCTCCGGCTaGGGACACTGGGCGGGGCCC +
Preference number: 5 (lower is better)
Translates to: QNTKPHLAQSQTLKYIIRGVVSG*GHWAGP
Trigger: GGGCCCCGCCCAGTGTCCCAAGCCGGAGACCACCCC...ACGGATTATATACTTCAGGGTTTGGCTTTGTGCTAAATGTGGTTTTGTGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp AGGCTCGCCCCATCCTTCAAGGCCTACATCACCTGGTCCCTGACCTCTTTCCTTAACCAACTACCACCTTaGTCTTCCCTCACAGTGTTC +
Preference number: 5 (lower is better)
Translates to: RLAPSFKAYITWSLTSFLNQLPP*SSLTVF
Trigger: GAACACTGTGAGGGAAGACAAAGGTGGTAGTTGGTT...AAGGAAAGAGGTCAGGGACCAGGTGATGTAGGCCTTGAAGGATGGGGCGAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR CAA 90 bp TATAGGATGACAAGTATAGCATGCAATGGCATAAAGAGGTCTATGTGTGAGTTATCCCGGTTCCCCATCTaGCCCGAGGGGCCGGCGACC +
Preference number: 5 (lower is better)
Translates to: YRMTSIACNGIKRSMCELSRFPI*PEGPAT
Trigger: GGTCGCCGGCCCCTCGGGCAAGATGGGGAACCGGGA...TAACTCACACATAGACCTCTTTATGCCATTGCATGCTATACTTGTCATCCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR CAA 90 bp CTATACAAACCTACCTTGGTCAGTACAACATATAAAGCCTCTAAAAGGTTAGCATCCCGGTTCCCCATCTaGCCCGAGGGGCCGGCGACC +
Preference number: 5 (lower is better)
Translates to: LYKPTLVSTTYKASKRLASRFPI*PEGPAT
Trigger: GGTCGCCGGCCCCTCGGGCAAGATGGGGAACCGGGA...TGCTAACCTTTTAGAGGCTTTATATGTTGTACTGACCAAGGTAGGTTTGTATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp AACCAACTACCACCTTTGTCTTCCCTCACAGTGTTCCAGACACACTGGCCTTGCTTCATGATGCCAATGTaGCTGATGGTGAGCCACCCC +
Preference number: 5 (lower is better)
Translates to: NQLPPLSSLTVFQTHWPCFMMPM*LMVSHP
Trigger: GGGGTGGCTCACCATCAGCAACATTGGCATCATGAA...GCAAGGCCAGTGTGTCTGGAACACTGTGAGGGAAGACAAAGGTGGTAGTTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR CAA 90 bp AAATATGTATGGCTTAGGTCTAAGCCCACTATCTCATATCTGAAGAATTACGTTTCCCGGTTCCCCATCTaGCCCGAGGGGCCGGCGACC +
Preference number: 5 (lower is better)
Translates to: KYVWLRSKPTISYLKNYVSRFPI*PEGPAT
Trigger: GGTCGCCGGCCCCTCGGGCAAGATGGGGAACCGGGA...AACGTAATTCTTCAGATATGAGATAGTGGGCTTAGACCTAAGCCATACATATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp TCACCAAGCCTTCAAAGCTTCTTCCTTCCCTACAGAGAGCATCCTATACCTTCCGCACAAGAGGTCGTCTaGTTACAATGCCCGACCCTC +
Preference number: 5 (lower is better)
Translates to: SPSLQSFFLPYREHPIPSAQEVV*LQCPTL
Trigger: GAGGGTCGGGCATTGTAACAAGACGACCTCTTGTGC...GGAAGGTATAGGATGCTCTCTGTAGGGAAGGAAGAAGCTTTGAAGGCTTGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR CAA 90 bp AATGCATTAGTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCGACTACTGGCCGGATGTGGGCCTaGCGAGGGGAGCACTTAGTG +
Preference number: 5 (lower is better)
Translates to: NALVKLVTCLLMSTHATTGRMWA*RGEHLV
Trigger: CACTAAGTGCTCCCCTCGCAAGGCCCACATCCGGCC...AGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTACTAATGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp TCCAATGGGCTTATTTTCAGGACTCACAGAGCCAGACTAATGCCACACTCCAACTTCATGATGCCAATGTaGCTGATGGTGAGCCACCCC +
Preference number: 5 (lower is better)
Translates to: SNGLIFRTHRARLMPHSNFMMPM*LMVSHP
Trigger: GGGGTGGCTCACCATCAGCAACATTGGCATCATGAA...GTTGGAGTGTGGCATTAGTCTGGCTCTGTGAGTCCTGAAAATAAGCCCATTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR CAA 90 bp AAAATTCCAGTTGGCTTCTGGCTGTTTCCTACATGTGAATCATCTGGTCCTTGGGGGGAGCACTTAGTGTaGGCCTCCTTTGGGTTGTGG +
Preference number: 5 (lower is better)
Translates to: KIPVGFWLFPTCESSGPWGEHLV*ASFGLW
Trigger: CCACAACCCAAAGGAGGCCAACACTAAGTGCTCCCC...CCAAGGACCAGATGATTCACATGTAGGAAACAGCCAGAAGCCAACTGGAATTTT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp AAAATTCCAGTTGGCTTCTGGCTGTTTCCTACATGTGAATCATCTGGTCCTTGGAGGCCTAGATGGAACTaGTGGAGGGGCTCCGAAGGA +
Preference number: 5 (lower is better)
Translates to: KIPVGFWLFPTCESSGPWRPRWN*WRGSEG
Trigger: TCCTTCGGAGCCCCTCCACAAGTTCCATCTAGGCCT...CCAAGGACCAGATGATTCACATGTAGGAAACAGCCAGAAGCCAACTGGAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp GGAAGCTACAAGGGCAGTGATTTTGTAAAGAATTATCCTGAGTCTGGAGGAGAGCTCTGTGGGATGAGGTaGGCTTGGACAACTCCAGGC +
Preference number: 5 (lower is better)
Translates to: GSYKGSDFVKNYPESGGELCGMR*AWTTPG
Trigger: GCCTGGAGTTGTCCAAGCCAACCTCATCCCACAGAG...CTCTCCTCCAGACTCAGGATAATTCTTTACAAAATCACTGCCCTTGTAGCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR CAA 90 bp AATCTAGATATACAGGAGGAAGCAGCAAGTGGAGAGGTCCACTCAGTGGCAGAGCCAAGACCTCACAGCTaGGAAGTAAGCACCTGGAAT +
Preference number: 5 (lower is better)
Translates to: NLDIQEEAASGEVHSVAEPRPHS*EVSTWN
Trigger: ATTCCAGGTGCTTACTTCCAAGCTGTGAGGTCTTGG...CTCTGCCACTGAGTGGACCTCTCCACTTGCTGCTTCCTCCTGTATATCTAGATT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR CAA 90 bp GTCAACTCTTCAAAGAGGCCTTCCCTCATCACCTTGACAAAAATAAAGCTTGCCGCACAAGAGGTCGTCTaGTTACAATGCCCGACCCTC +
Preference number: 5 (lower is better)
Translates to: VNSSKRPSLITLTKIKLAAQEVV*LQCPTL
Trigger: GAGGGTCGGGCATTGTAACAAGACGACCTCTTGTGC...GGCAAGCTTTATTTTTGTCAAGGTGATGAGGGAAGGCCTCTTTGAAGAGTTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR CAA 90 bp TCCAATGGGCTTATTTTCAGGACTCACAGAGCCAGACTAATGCCACACTCCAACTCAGCGCATCTGAGTTaGCAAGATCAGTGTTGGCTG +
Preference number: 5 (lower is better)
Translates to: SNGLIFRTHRARLMPHSNSAHLS*QDQCWL
Trigger: CAGCCAACACTGATCTTGCAAACTCAGATGCGCTGA...GTTGGAGTGTGGCATTAGTCTGGCTCTGTGAGTCCTGAAAATAAGCCCATTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR CAA 90 bp AACCAACTACCACCTTTGTCTTCCCTCACAGTGTTCCAGACACACTGGCCTTGCAAAGTCCACAGCAAATaGCTGAACCATCTGCAGCAA +
Preference number: 5 (lower is better)
Translates to: NQLPPLSSLTVFQTHWPCKVHSK*LNHLQQ
Trigger: TTGCTGCAGATGGTTCAGCAATTTGCTGTGGACTTT...GCAAGGCCAGTGTGTCTGGAACACTGTGAGGGAAGACAAAGGTGGTAGTTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR CAA 90 bp ACAGCCTGGGTTCAAATTTCTGCTTTGCCACCAACTAGCTGTGTGACTTTGGTAGCAATACCTGGTCCTTaGTCTTCCCTTCTCGCTCAC +
Preference number: 5 (lower is better)
Translates to: TAWVQISALPPTSCVTLVAIPGP*SSLLAH
Trigger: GTGAGCGAGAAGGGAAGACAAAGGACCAGGTATTGC...TACCAAAGTCACACAGCTAGTTGGTGGCAAAGCAGAAATTTGAACCCAGGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR CAA 90 bp CTTCCAGATCCTTTACTCCCTCCCTTCTTTGAAGAGCCTGCTCTAATGTCAACTGCAATACCTGGTCCTTaGTCTTCCCTTCTCGCTCAC +
Preference number: 5 (lower is better)
Translates to: LPDPLLPPFFEEPALMSTAIPGP*SSLLAH
Trigger: GTGAGCGAGAAGGGAAGACAAAGGACCAGGTATTGC...AGTTGACATTAGAGCAGGCTCTTCAAAGAAGGGAGGGAGTAAAGGATCTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR CAA 90 bp ATGTCAATGCTGAGATGCCTGGAATTCATCTTCATAAGTCCTCTGTGGGATGAGTGGGATGAGGTTGGCTaGGACAACTCCAGGCATCTC +
Preference number: 5 (lower is better)
Translates to: MSMLRCLEFIFISPLWDEWDEVG*DNSRHL
Trigger: GAGATGCCTGGAGTTGTCCAAGCCAACCTCATCCCA...CTCATCCCACAGAGGACTTATGAAGATGAATTCCAGGCATCTCAGCATTGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR CAA 90 bp GTCTGGAGGAGAGGAGATGAGCCAATAACCAAGAGCTCACCAAGCCTTCAAAGCTTTGCAAGATCAGTGTaGGCTGGAGTAACAGCTAAA +
Preference number: 5 (lower is better)
Translates to: VWRRGDEPITKSSPSLQSFARSV*AGVTAK
Trigger: TTTAGCTGTTACTCCAGCCAACACTGATCTTGCAAA...GCTTTGAAGGCTTGGTGAGCTCTTGGTTATTGGCTCATCTCCTCTCCTCCAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR CAA 90 bp AAAATTCCAGTTGGCTTCTGGCTGTTTCCTACATGTGAATCATCTGGTCCTTGGTTCATGATGCCAATGTaGCTGATGGTGAGCCACCCC +
Preference number: 5 (lower is better)
Translates to: KIPVGFWLFPTCESSGPWFMMPM*LMVSHP
Trigger: GGGGTGGCTCACCATCAGCAACATTGGCATCATGAA...CCAAGGACCAGATGATTCACATGTAGGAAACAGCCAGAAGCCAACTGGAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp GTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCGACTACTCATGATTTAGGGGAGCACTTAGTGTaGGCCTCCTTTGGGTTGTGG +
Preference number: 5 (lower is better)
Translates to: VKLVTCLLMSTHATTHDLGEHLV*ASFGLW
Trigger: CCACAACCCAAAGGAGGCCAACACTAAGTGCTCCCC...TAAATCATGAGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp AATGCATTAGTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCGACTACTAGGCCTAGATGGAACTaGTGGAGGGGCTCCGAAGGA +
Preference number: 5 (lower is better)
Translates to: NALVKLVTCLLMSTHATTRPRWN*WRGSEG
Trigger: TCCTTCGGAGCCCCTCCACAAGTTCCATCTAGGCCT...AGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTACTAATGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp CACATGCGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGCTTTCGCAGGCCTAGATGGAACTaGTGGAGGGGCTCCGAAGGA +
Preference number: 5 (lower is better)
Translates to: HMRLLMIYCNGYQICCFRRPRWN*WRGSEG
Trigger: TCCTTCGGAGCCCCTCCACAAGTTCCATCTAGGCCT...GCGAAAGCAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCGCATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp GTCTGGAGGAGAGGAGATGAGCCAATAACCAAGAGCTCACCAAGCCTTCAAAGCGCATCTCTGGGATTCTaGCCTTTATTTGTGGTTGAA +
Preference number: 5 (lower is better)
Translates to: VWRRGDEPITKSSPSLQSASLGF*PLFVVE
Trigger: TTCAACCACAAATAAAGGCAAGAATCCCAGAGATGC...GCTTTGAAGGCTTGGTGAGCTCTTGGTTATTGGCTCATCTCCTCTCCTCCAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR CAA 90 bp AATCTAGATATACAGGAGGAAGCAGCAAGTGGAGAGGTCCACTCAGTGGCAGAGCCTTCCCTCATCACCTaGACAAAAATAAAGCTTGCC +
Preference number: 5 (lower is better)
Translates to: NLDIQEEAASGEVHSVAEPSLIT*TKIKLA
Trigger: GGCAAGCTTTATTTTTGTCAAGGTGATGAGGGAAGG...CTCTGCCACTGAGTGGACCTCTCCACTTGCTGCTTCCTCCTGTATATCTAGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR CAA 90 bp GTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCGACTACTCATGATTTAGCACAAGAGGTCGTCTaGTTACAATGCCCGACCCTC +
Preference number: 5 (lower is better)
Translates to: VKLVTCLLMSTHATTHDLAQEVV*LQCPTL
Trigger: GAGGGTCGGGCATTGTAACAAGACGACCTCTTGTGC...TAAATCATGAGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp TGGGCTTATTTTCAGGACTCACAGAGCCAGACTAATGCCACACTCCAACAGCAGTCCATAAGGTCCAGTTaGGTGATAACTCCAATGGTT +
Preference number: 5 (lower is better)
Translates to: WAYFQDSQSQTNATLQQQSIRSS*VITPMV
Trigger: AACCATTGGAGTTATCACCAAACTGGACCTTATGGA...CTGCTGTTGGAGTGTGGCATTAGTCTGGCTCTGTGAGTCCTGAAAATAAGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR CAA 90 bp TCACCAAGCCTTCAAAGCTTCTTCCTTCCCTACAGAGAGCATCCTATACCTTCCAACTGTCCCTGTAGTTaGTTCCTGAAGTTTGGTAGG +
Preference number: 5 (lower is better)
Translates to: SPSLQSFFLPYREHPIPSNCPCS*FLKFGR
Trigger: CCTACCAAACTTCAGGAACAAACTACAGGGACAGTT...GGAAGGTATAGGATGCTCTCTGTAGGGAAGGAAGAAGCTTTGAAGGCTTGGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR CAA 90 bp AGCGATGAATGCATTAGTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCGCAATACCTGGTCCTTaGTCTTCCCTTCTCGCTCAC +
Preference number: 5 (lower is better)
Translates to: SDECISKTGYLPTDVHTCAIPGP*SSLLAH
Trigger: GTGAGCGAGAAGGGAAGACAAAGGACCAGGTATTGC...GCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTACTAATGCATTCATCGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp TATTCACTCCCTTGTTTAATGTCTGCTCCAGTGGGGGCAGGACTTTATTGCTATTCCCGAACTTTCAGGTaGTCCAAGGGAAGCATGTAC +
Preference number: 5 (lower is better)
Translates to: YSLPCLMSAPVGAGLYCYSRTFR*SKGSMY
Trigger: GTACATGCTTCCCTTGGACAACCTGAAAGTTCGGGA...ATAGCAATAAAGTCCTGCCCCCACTGGAGCAGACATTAAACAAGGGAGTGAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR CAA 90 bp GAATTACGTTTAATGAGCTACCTGGTAGATAGCCTAGAAAACTTGTCCAAAGCAGGGGAGCACTTAGTGTaGGCCTCCTTTGGGTTGTGG +
Preference number: 5 (lower is better)
Translates to: ELRLMSYLVDSLENLSKAGEHLV*ASFGLW
Trigger: CCACAACCCAAAGGAGGCCAACACTAAGTGCTCCCC...TGCTTTGGACAAGTTTTCTAGGCTATCTACCAGGTAGCTCATTAAACGTAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp AATCTAGATATACAGGAGGAAGCAGCAAGTGGAGAGGTCCACTCAGTGGCAGAGTCGTTATTCACTCCCTaGTTTAATGTCTGCTCCAGT +
Preference number: 5 (lower is better)
Translates to: NLDIQEEAASGEVHSVAESLFTP*FNVCSS
Trigger: ACTGGAGCAGACATTAAACAAGGGAGTGAATAACGA...CTCTGCCACTGAGTGGACCTCTCCACTTGCTGCTTCCTCCTGTATATCTAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR CAA 90 bp AATCTAGATATACAGGAGGAAGCAGCAAGTGGAGAGGTCCACTCAGTGGCAGAGAGCTTGGTTTTGCACTaGCTATCTTCTGCCAAGAAT +
Preference number: 5 (lower is better)
Translates to: NLDIQEEAASGEVHSVAESLVLH*LSSAKN
Trigger: ATTCTTGGCAGAAGATAGCAAGTGCAAAACCAAGCT...CTCTGCCACTGAGTGGACCTCTCCACTTGCTGCTTCCTCCTGTATATCTAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR CAA 90 bp ATGTCCACACATGCGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGGCACAAGAGGTCGTCTaGTTACAATGCCCGACCCTC +
Preference number: 5 (lower is better)
Translates to: MSTHATTHDLLQRLSNMLAQEVV*LQCPTL
Trigger: GAGGGTCGGGCATTGTAACAAGACGACCTCTTGTGC...CAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCGCATGTGTGGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp GCATCTAGTTTAACTTCCATTTGGAGGGCACAAAGCATATTGTGGGAGGTTCATTCAGCGCATCTGAGTTaGCAAGATCAGTGTTGGCTG +
Preference number: 5 (lower is better)
Translates to: ASSLTSIWRAQSILWEVHSAHLS*QDQCWL
Trigger: CAGCCAACACTGATCTTGCAAACTCAGATGCGCTGA...ATGAACCTCCCACAATATGCTTTGTGCCCTCCAAATGGAAGTTAAACTAGATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR CAA 90 bp GAATTCATCTTCATAAGTCCTCTGTGGGATGAGGTTGGCTTGGACAACTCCAGGAATGGTTCTCAGACCTaGAGGATCAACTTCTTTAGC +
Preference number: 5 (lower is better)
Translates to: EFIFISPLWDEVGLDNSRNGSQT*RINFFS
Trigger: GCTAAAGAAGTTGATCCTCAAGGTCTGAGAACCATT...CCTGGAGTTGTCCAAGCCAACCTCATCCCACAGAGGACTTATGAAGATGAATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR CAA 90 bp ACCAAGCCTTCAAAGCTTCTTCCTTCCCTACAGAGAGCATCCTATACCTTCCAAAAAGTCCACAGCAAATaGCTGAACCATCTGCAGCAA +
Preference number: 5 (lower is better)
Translates to: TKPSKLLPSLQRASYTFQKVHSK*LNHLQQ
Trigger: TTGCTGCAGATGGTTCAGCAATTTGCTGTGGACTTT...TTGGAAGGTATAGGATGCTCTCTGTAGGGAAGGAAGAAGCTTTGAAGGCTTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR CAA 90 bp GTCTGGAGGAGAGGAGATGAGCCAATAACCAAGAGCTCACCAAGCCTTCAAAGCCGCAATTCTTTCTCATaGAACTCCATCTTTACTATC +
Preference number: 5 (lower is better)
Translates to: VWRRGDEPITKSSPSLQSRNSFS*NSIFTI
Trigger: GATAGTAAAGATGGAGTTCAATGAGAAAGAATTGCG...GCTTTGAAGGCTTGGTGAGCTCTTGGTTATTGGCTCATCTCCTCTCCTCCAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR CAA 90 bp AACCAACTACCACCTTTGTCTTCCCTCACAGTGTTCCAGACACACTGGCCTTGCCGCAATTCTTTCTCATaGAACTCCATCTTTACTATC +
Preference number: 5 (lower is better)
Translates to: NQLPPLSSLTVFQTHWPCRNSFS*NSIFTI
Trigger: GATAGTAAAGATGGAGTTCAATGAGAAAGAATTGCG...GCAAGGCCAGTGTGTCTGGAACACTGTGAGGGAAGACAAAGGTGGTAGTTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR CAA 90 bp AATCTAGATATACAGGAGGAAGCAGCAAGTGGAGAGGTCCACTCAGTGGCAGAGAAGTTTGCCAGTTTTTaGGTACACTTCTTCACAGTG +
Preference number: 5 (lower is better)
Translates to: NLDIQEEAASGEVHSVAEKFASF*VHFFTV
Trigger: CACTGTGAAGAAGTGTACCAAAAAACTGGCAAACTT...CTCTGCCACTGAGTGGACCTCTCCACTTGCTGCTTCCTCCTGTATATCTAGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR CAA 90 bp AATGCATTAGTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCGACTACTGCAATACCTGGTCCTTaGTCTTCCCTTCTCGCTCAC +
Preference number: 5 (lower is better)
Translates to: NALVKLVTCLLMSTHATTAIPGP*SSLLAH
Trigger: GTGAGCGAGAAGGGAAGACAAAGGACCAGGTATTGC...AGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTACTAATGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp AATGCATTAGTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCGACTACTTTCATGATGCCAATGTaGCTGATGGTGAGCCACCCC +
Preference number: 5 (lower is better)
Translates to: NALVKLVTCLLMSTHATTFMMPM*LMVSHP
Trigger: GGGGTGGCTCACCATCAGCAACATTGGCATCATGAA...AGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTACTAATGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp CTTCCAGATCCTTTACTCCCTCCCTTCTTTGAAGAGCCTGCTCTAATGTCAACTCTGTACTCCTGGCTATaGACAGGAAAGCATCTAGTT +
Preference number: 5 (lower is better)
Translates to: LPDPLLPPFFEEPALMSTLYSWL*TGKHLV
Trigger: AACTAGATGCTTTCCTGTCAATAGCCAGGAGTACAG...AGTTGACATTAGAGCAGGCTCTTCAAAGAAGGGAGGGAGTAAAGGATCTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR CAA 90 bp AATGTCTGCTCCAGTGGGGGCAGGACTTTATTGCTATTGTTCACCTCTGTATCATTTGCAAGATCAGTGTaGGCTGGAGTAACAGCTAAA +
Preference number: 5 (lower is better)
Translates to: NVCSSGGRTLLLLFTSVSFARSV*AGVTAK
Trigger: TTTAGCTGTTACTCCAGCCAACACTGATCTTGCAAA...TGATACAGAGGTGAACAATAGCAATAAAGTCCTGCCCCCACTGGAGCAGACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR CAA 90 bp CTTCCAGATCCTTTACTCCCTCCCTTCTTTGAAGAGCCTGCTCTAATGTCAACTAATGGTTCTCAGACCTaGAGGATCAACTTCTTTAGC +
Preference number: 5 (lower is better)
Translates to: LPDPLLPPFFEEPALMSTNGSQT*RINFFS
Trigger: GCTAAAGAAGTTGATCCTCAAGGTCTGAGAACCATT...AGTTGACATTAGAGCAGGCTCTTCAAAGAAGGGAGGGAGTAAAGGATCTGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR CAA 90 bp CTTCCAGATCCTTTACTCCCTCCCTTCTTTGAAGAGCCTGCTCTAATGTCAACTTCCATAAGGTCCAGTTaGGTGATAACTCCAATGGTT +
Preference number: 5 (lower is better)
Translates to: LPDPLLPPFFEEPALMSTSIRSS*VITPMV
Trigger: AACCATTGGAGTTATCACCAAACTGGACCTTATGGA...AGTTGACATTAGAGCAGGCTCTTCAAAGAAGGGAGGGAGTAAAGGATCTGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR CAA 90 bp ATAGGGCTGCTATACAAACCTACCTTGGTCAGTACAACATATAAAGCCTCTAAAGCAATACCTGGTCCTTaGTCTTCCCTTCTCGCTCAC +
Preference number: 5 (lower is better)
Translates to: IGLLYKPTLVSTTYKASKAIPGP*SSLLAH
Trigger: GTGAGCGAGAAGGGAAGACAAAGGACCAGGTATTGC...TTTAGAGGCTTTATATGTTGTACTGACCAAGGTAGGTTTGTATAGCAGCCCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp AATGCATTAGTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCGACTACTATGGTGAGCCACCCCTaGCGAATCACAATTTGCCTT +
Preference number: 5 (lower is better)
Translates to: NALVKLVTCLLMSTHATTMVSHP*RITICL
Trigger: AAGGCAAATTGTGATTCGCAAGGGGTGGCTCACCAT...AGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTACTAATGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355305.9
CDS-3UTR CAA 90 bp GGAAGCTACAAGGGCAGTGATTTTGTAAAGAATTATCCTGAGTCTGGAGGAGAGGTTCAAATTTCTGCTTaGCCACCAACTAGCTGTGTG +
Preference number: 5 (lower is better)
Translates to: GSYKGSDFVKNYPESGGEVQISA*PPTSCV
Trigger: CACACAGCTAGTTGGTGGCAAAGCAGAAATTTGAAC...CTCTCCTCCAGACTCAGGATAATTCTTTACAAAATCACTGCCCTTGTAGCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR CAA 90 bp AGCGATGAATGCATTAGTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCCTACTCAGTGAATACTaGCTCTGCTGTCTGGGAACA +
Preference number: 5 (lower is better)
Translates to: SDECISKTGYLPTDVHTCLLSEY*LCCLGT
Trigger: TGTTCCCAGACAGCAGAGCAAGTATTCACTGAGTAG...GCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTACTAATGCATTCATCGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp TATAAAGCCTCTAAAAGGTTAGCAGTTTCTGAGTCAAACCCCAAAGGTTTGACACACAAAGGTAGACAATaGGGGCAGTGCAACTGTGGG +
Preference number: 5 (lower is better)
Translates to: YKASKRLAVSESNPKGLTHKGRQ*GQCNCG
Trigger: CCCACAGTTGCACTGCCCCAATTGTCTACCTTTGTG...TGTCAAACCTTTGGGGTTTGACTCAGAAACTGCTAACCTTTTAGAGGCTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp ATAGGCAATTATGGAGTAGGTAGTAGCATTAATGGTAGACAACAGAATTACTGTGCACAAGAGGTCGTCTaGTTACAATGCCCGACCCTC +
Preference number: 5 (lower is better)
Translates to: IGNYGVGSSINGRQQNYCAQEVV*LQCPTL
Trigger: GAGGGTCGGGCATTGTAACAAGACGACCTCTTGTGC...ACAGTAATTCTGTTGTCTACCATTAATGCTACTACCTACTCCATAATTGCCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp AGCGATGAATGCATTAGTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCAACTGTCCCTGTAGTTaGTTCCTGAAGTTTGGTAGG +
Preference number: 5 (lower is better)
Translates to: SDECISKTGYLPTDVHTCNCPCS*FLKFGR
Trigger: CCTACCAAACTTCAGGAACAAACTACAGGGACAGTT...GCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTACTAATGCATTCATCGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp ACCAAGCCTTCAAAGCTTCTTCCTTCCCTACAGAGAGCATCCTATACCTTCCAAAAGTTTGCCAGTTTTTaGGTACACTTCTTCACAGTG +
Preference number: 5 (lower is better)
Translates to: TKPSKLLPSLQRASYTFQKFASF*VHFFTV
Trigger: CACTGTGAAGAAGTGTACCAAAAAACTGGCAAACTT...TTGGAAGGTATAGGATGCTCTCTGTAGGGAAGGAAGAAGCTTTGAAGGCTTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR CAA 90 bp TATAAAGCCTCTAAAAGGTTAGCAGTTTCTGAGTCAAACCCCAAAGGTTTGACATCCCGAACTTTCAGGTaGTCCAAGGGAAGCATGTAC +
Preference number: 5 (lower is better)
Translates to: YKASKRLAVSESNPKGLTSRTFR*SKGSMY
Trigger: GTACATGCTTCCCTTGGACAACCTGAAAGTTCGGGA...TGTCAAACCTTTGGGGTTTGACTCAGAAACTGCTAACCTTTTAGAGGCTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp TTCAGACTTCATTCAACATTGGCATCTCCTTTTAGCAGAATACAAACCCTTTGGTCCCGAACTTTCAGGTaGTCCAAGGGAAGCATGTAC +
Preference number: 5 (lower is better)
Translates to: FRLHSTLASPFSRIQTLWSRTFR*SKGSMY
Trigger: GTACATGCTTCCCTTGGACAACCTGAAAGTTCGGGA...CCAAAGGGTTTGTATTCTGCTAAAAGGAGATGCCAATGTTGAATGAAGTCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp CTTCCAGATCCTTTACTCCCTCCCTTCTTTGAAGAGCCTGCTCTAATGTCAACTAGTGCAAAGATGTGCTaGCTAGACATAAAGCTCTTT +
Preference number: 5 (lower is better)
Translates to: LPDPLLPPFFEEPALMSTSAKMC*LDIKLF
Trigger: AAAGAGCTTTATGTCTAGCAAGCACATCTTTGCACT...AGTTGACATTAGAGCAGGCTCTTCAAAGAAGGGAGGGAGTAAAGGATCTGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR CAA 90 bp CACATGCGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGCTTTCGCGTGCAGACTTTTCCTTaGCAAACTACCTCGTGCTTC +
Preference number: 5 (lower is better)
Translates to: HMRLLMIYCNGYQICCFRVQTFP*QTTSCF
Trigger: GAAGCACGAGGTAGTTTGCAAAGGAAAAGTCTGCAC...GCGAAAGCAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCGCATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp CACTATCTCATATCTGAAGAATTACGTTTAATGAGCTACCTGGTAGATAGCCTACACAAAGGTAGACAATaGGGGCAGTGCAACTGTGGG +
Preference number: 5 (lower is better)
Translates to: HYLISEELRLMSYLVDSLHKGRQ*GQCNCG
Trigger: CCCACAGTTGCACTGCCCCAATTGTCTACCTTTGTG...TAGGCTATCTACCAGGTAGCTCATTAAACGTAATTCTTCAGATATGAGATAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp GTCAACTCTTCAAAGAGGCCTTCCCTCATCACCTTGACAAAAATAAAGCTTGCCGACTCTCTCCCTATTTaGAACCTAAAAAGGACCCAA +
Preference number: 5 (lower is better)
Translates to: VNSSKRPSLITLTKIKLADSLPI*NLKRTQ
Trigger: TTGGGTCCTTTTTAGGTTCAAAATAGGGAGAGAGTC...GGCAAGCTTTATTTTTGTCAAGGTGATGAGGGAAGGCCTCTTTGAAGAGTTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR CAA 90 bp CTATACAAACCTACCTTGGTCAGTACAACATATAAAGCCTCTAAAAGGTTAGCATCAGCGCATCTGAGTTaGCAAGATCAGTGTTGGCTG +
Preference number: 5 (lower is better)
Translates to: LYKPTLVSTTYKASKRLASAHLS*QDQCWL
Trigger: CAGCCAACACTGATCTTGCAAACTCAGATGCGCTGA...TGCTAACCTTTTAGAGGCTTTATATGTTGTACTGACCAAGGTAGGTTTGTATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp CACATGCGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGCTTTCGCGAATCACAATTTGCCTaGAAGGCGGAAGATTGGTTC +
Preference number: 5 (lower is better)
Translates to: HMRLLMIYCNGYQICCFRESQFA*KAEDWF
Trigger: GAACCAATCTTCCGCCTTCAAGGCAAATTGTGATTC...GCGAAAGCAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCGCATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355305.9
CDS-3UTR CAA 90 bp CGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGCTTTCGCATAATTTTCATGATGCCAATGTaGCTGATGGTGAGCCACCCC +
Preference number: 5 (lower is better)
Translates to: RLLMIYCNGYQICCFRIIFMMPM*LMVSHP
Trigger: GGGGTGGCTCACCATCAGCAACATTGGCATCATGAA...AATTATGCGAAAGCAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp GCACGTCAAACTATGCACATACTAGAGTTTCAGACTTCATTCAACATTGGCATCGGCTTCTTTCAGTGCTaGATACATTCGAAGCATCTC +
Preference number: 5 (lower is better)
Translates to: ARQTMHILEFQTSFNIGIGFFQC*IHSKHL
Trigger: GAGATGCTTCGAATGTATCAAGCACTGAAAGAAGCC...GATGCCAATGTTGAATGAAGTCTGAAACTCTAGTATGTGCATAGTTTGACGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp AAAATTCCAGTTGGCTTCTGGCTGTTTCCTACATGTGAATCATCTGGTCCTTGGAATGCAGTATGTATCTaGCACATTGGTTCCATTCAC +
Preference number: 5 (lower is better)
Translates to: KIPVGFWLFPTCESSGPWNAVCI*HIGSIH
Trigger: GTGAATGGAACCAATGTGCAAGATACATACTGCATT...CCAAGGACCAGATGATTCACATGTAGGAAACAGCCAGAAGCCAACTGGAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp CACATGCGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGCTTTCGCGACAAACACTCCTCTTaGAGTTTCCTCTCTCTTGCT +
Preference number: 5 (lower is better)
Translates to: HMRLLMIYCNGYQICCFRDKHSS*SFLSLA
Trigger: AGCAAGAGAGAGGAAACTCAAAGAGGAGTGTTTGTC...GCGAAAGCAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCGCATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp GTCAACTCTTCAAAGAGGCCTTCCCTCATCACCTTGACAAAAATAAAGCTTGCCATCTCAGACTTTCTCTaGAAAAGACTCTCTCCCTAT +
Preference number: 5 (lower is better)
Translates to: VNSSKRPSLITLTKIKLAISDFL*KRLSPY
Trigger: ATAGGGAGAGAGTCTTTTCAAGAGAAAGTCTGAGAT...GGCAAGCTTTATTTTTGTCAAGGTGATGAGGGAAGGCCTCTTTGAAGAGTTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS GCA 90 bp CTCCATAGCTCTTTTGTTTCAAAGCCCTCAAATTCTCCCAATAGCTaGCAAAATGTCATTCATTGGGACGGAGTGTTCTTTAGTCCTATT +
Preference number: 5 (lower is better)
Translates to: LHSSFVSKPSNSPNS*QNVIHWDGVFFSPI
Trigger: AATAGGACTAAAGAACACTCCGTCCCAATGAATGACATTTTGGCAGCTATTGGGAGAATTTGAGGGCTTTGAAACAAAAGAGCTATGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491124.1
CDS-3UTR CAA 90 bp CACATGCGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGCTTTCGCTTTGCAAGATCAGTGTaGGCTGGAGTAACAGCTAAA +
Preference number: 5 (lower is better)
Translates to: HMRLLMIYCNGYQICCFRFARSV*AGVTAK
Trigger: TTTAGCTGTTACTCCAGCCAACACTGATCTTGCAAA...GCGAAAGCAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCGCATGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp AAATATGTATGGCTTAGGTCTAAGCCCACTATCTCATATCTGAAGAATTACGTTTCAGCGCATCTGAGTTaGCAAGATCAGTGTTGGCTG +
Preference number: 5 (lower is better)
Translates to: KYVWLRSKPTISYLKNYVSAHLS*QDQCWL
Trigger: CAGCCAACACTGATCTTGCAAACTCAGATGCGCTGA...AACGTAATTCTTCAGATATGAGATAGTGGGCTTAGACCTAAGCCATACATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp GTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCGACTACTCATGATTTATCCATAAGGTCCAGTTaGGTGATAACTCCAATGGTT +
Preference number: 5 (lower is better)
Translates to: VKLVTCLLMSTHATTHDLSIRSS*VITPMV
Trigger: AACCATTGGAGTTATCACCAAACTGGACCTTATGGA...TAAATCATGAGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp GCAATGAAGATGAGCGATGAATGCATTAGTAAAACTGGTTACTTGCCTACTGATAACTGTCCCTGTAGTTaGTTCCTGAAGTTTGGTAGG +
Preference number: 5 (lower is better)
Translates to: AMKMSDECISKTGYLPTDNCPCS*FLKFGR
Trigger: CCTACCAAACTTCAGGAACAAACTACAGGGACAGTT...ATCAGTAGGCAAGTAACCAGTTTTACTAATGCATTCATCGCTCATCTTCATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp GCAATGAAGATGAGCGATGAATGCATTAGTAAAACTGGTTACTTGCCTACTGATAAAGTCCACAGCAAATaGCTGAACCATCTGCAGCAA +
Preference number: 5 (lower is better)
Translates to: AMKMSDECISKTGYLPTDKVHSK*LNHLQQ
Trigger: TTGCTGCAGATGGTTCAGCAATTTGCTGTGGACTTT...ATCAGTAGGCAAGTAACCAGTTTTACTAATGCATTCATCGCTCATCTTCATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp ATGTCCACACATGCGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGAAAGTCCACAGCAAATaGCTGAACCATCTGCAGCAA +
Preference number: 5 (lower is better)
Translates to: MSTHATTHDLLQRLSNMLKVHSK*LNHLQQ
Trigger: TTGCTGCAGATGGTTCAGCAATTTGCTGTGGACTTT...CAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCGCATGTGTGGACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp AGCGATGAATGCATTAGTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCAAGTTTGCCAGTTTTTaGGTACACTTCTTCACAGTG +
Preference number: 5 (lower is better)
Translates to: SDECISKTGYLPTDVHTCKFASF*VHFFTV
Trigger: CACTGTGAAGAAGTGTACCAAAAAACTGGCAAACTT...GCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTACTAATGCATTCATCGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp AAATATGTATGGCTTAGGTCTAAGCCCACTATCTCATATCTGAAGAATTACGTTTCCCGAACTTTCAGGTaGTCCAAGGGAAGCATGTAC +
Preference number: 5 (lower is better)
Translates to: KYVWLRSKPTISYLKNYVSRTFR*SKGSMY
Trigger: GTACATGCTTCCCTTGGACAACCTGAAAGTTCGGGA...AACGTAATTCTTCAGATATGAGATAGTGGGCTTAGACCTAAGCCATACATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp CAAAACACAAAACCACATTTAGCACAAAGCCAAACCCTGAAGTATATAATCCGTCTACTCAGTGAATACTaGCTCTGCTGTCTGGGAACA +
Preference number: 5 (lower is better)
Translates to: QNTKPHLAQSQTLKYIIRLLSEY*LCCLGT
Trigger: TGTTCCCAGACAGCAGAGCAAGTATTCACTGAGTAG...ACGGATTATATACTTCAGGGTTTGGCTTTGTGCTAAATGTGGTTTTGTGTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp AAAATTCCAGTTGGCTTCTGGCTGTTTCCTACATGTGAATCATCTGGTCCTTGGTATGTATCTTGCACATaGGTTCCATTCACAAAGAGT +
Preference number: 5 (lower is better)
Translates to: KIPVGFWLFPTCESSGPWYVSCT*VPFTKS
Trigger: ACTCTTTGTGAATGGAACCAATGTGCAAGATACATA...CCAAGGACCAGATGATTCACATGTAGGAAACAGCCAGAAGCCAACTGGAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp GCATCTAGTTTAACTTCCATTTGGAGGGCACAAAGCATATTGTGGGAGGTTCATAGGACTTTATTGCTATaGTTCACCTCTGTATCACCA +
Preference number: 5 (lower is better)
Translates to: ASSLTSIWRAQSILWEVHRTLLL*FTSVSP
Trigger: TGGTGATACAGAGGTGAACAATAGCAATAAAGTCCT...ATGAACCTCCCACAATATGCTTTGTGCCCTCCAAATGGAAGTTAAACTAGATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS CCA 90 bp CAAATTTCTGCTTTGCCACCAACTAGCTGTGTGACTTTGGTAAGTTaGTTATCCTCGCCAAGACTAAATGTTCTCATCATCTTTATACCA +
Preference number: 5 (lower is better)
Translates to: QISALPPTSCVTLVS*LSSPRLNVLIIFIP
Trigger: TGGTATAAAGATGATGAGAACATTTAGTCTTGGCGAGGATAACCAACTTACCAAAGTCACACAGCTAGTTGGTGGCAAAGCAGAAATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS-3UTR CAA 90 bp GAATTACGTTTAATGAGCTACCTGGTAGATAGCCTAGAAAACTTGTCCAAAGCATTTGCAAGATCAGTGTaGGCTGGAGTAACAGCTAAA +
Preference number: 5 (lower is better)
Translates to: ELRLMSYLVDSLENLSKAFARSV*AGVTAK
Trigger: TTTAGCTGTTACTCCAGCCAACACTGATCTTGCAAA...TGCTTTGGACAAGTTTTCTAGGCTATCTACCAGGTAGCTCATTAAACGTAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp GAATTACGTTTAATGAGCTACCTGGTAGATAGCCTAGAAAACTTGTCCAAAGCATCCATAAGGTCCAGTTaGGTGATAACTCCAATGGTT +
Preference number: 5 (lower is better)
Translates to: ELRLMSYLVDSLENLSKASIRSS*VITPMV
Trigger: AACCATTGGAGTTATCACCAAACTGGACCTTATGGA...TGCTTTGGACAAGTTTTCTAGGCTATCTACCAGGTAGCTCATTAAACGTAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp TATAGGATGACAAGTATAGCATGCAATGGCATAAAGAGGTCTATGTGTGAGTTAAACTGTCCCTGTAGTTaGTTCCTGAAGTTTGGTAGG +
Preference number: 5 (lower is better)
Translates to: YRMTSIACNGIKRSMCELNCPCS*FLKFGR
Trigger: CCTACCAAACTTCAGGAACAAACTACAGGGACAGTT...TAACTCACACATAGACCTCTTTATGCCATTGCATGCTATACTTGTCATCCTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520906.5
CDS-3UTR CAA 90 bp CACTATCTCATATCTGAAGAATTACGTTTAATGAGCTACCTGGTAGATAGCCTAAACTGTCCCTGTAGTTaGTTCCTGAAGTTTGGTAGG +
Preference number: 5 (lower is better)
Translates to: HYLISEELRLMSYLVDSLNCPCS*FLKFGR
Trigger: CCTACCAAACTTCAGGAACAAACTACAGGGACAGTT...TAGGCTATCTACCAGGTAGCTCATTAAACGTAATTCTTCAGATATGAGATAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp TATAAAGCCTCTAAAAGGTTAGCAGTTTCTGAGTCAAACCCCAAAGGTTTGACAAGTAAAACTGGTTACTaGCCTACTGATGTCCACACA +
Preference number: 5 (lower is better)
Translates to: YKASKRLAVSESNPKGLTSKTGY*PTDVHT
Trigger: TGTGTGGACATCAGTAGGCAAGTAACCAGTTTTACT...TGTCAAACCTTTGGGGTTTGACTCAGAAACTGCTAACCTTTTAGAGGCTTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp AATGCATTAGTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCGACTACTAGGGAGACATTTCAGTaGGTGAAACCTGATTTACTT +
Preference number: 5 (lower is better)
Translates to: NALVKLVTCLLMSTHATTRETFQ*VKPDLL
Trigger: AAGTAAATCAGGTTTCACCAACTGAAATGTCTCCCT...AGTAGTCGCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTACTAATGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp AGCGATGAATGCATTAGTAAAACTGGTTACTTGCCTACTGATGTCCACACATGCTATGTATCTTGCACATaGGTTCCATTCACAAAGAGT +
Preference number: 5 (lower is better)
Translates to: SDECISKTGYLPTDVHTCYVSCT*VPFTKS
Trigger: ACTCTTTGTGAATGGAACCAATGTGCAAGATACATA...GCATGTGTGGACATCAGTAGGCAAGTAACCAGTTTTACTAATGCATTCATCGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp CACATGCGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGCTTTCGCGGTCCCATTTCATATTaGAGAATTATGGCTACAGTC +
Preference number: 5 (lower is better)
Translates to: HMRLLMIYCNGYQICCFRGPISY*RIMATV
Trigger: GACTGTAGCCATAATTCTCAAATATGAAATGGGACC...GCGAAAGCAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCGCATGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp CACTATCTCATATCTGAAGAATTACGTTTAATGAGCTACCTGGTAGATAGCCTATTTGCAAGATCAGTGTaGGCTGGAGTAACAGCTAAA +
Preference number: 5 (lower is better)
Translates to: HYLISEELRLMSYLVDSLFARSV*AGVTAK
Trigger: TTTAGCTGTTACTCCAGCCAACACTGATCTTGCAAA...TAGGCTATCTACCAGGTAGCTCATTAAACGTAATTCTTCAGATATGAGATAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp CACTATCTCATATCTGAAGAATTACGTTTAATGAGCTACCTGGTAGATAGCCTATCCATAAGGTCCAGTTaGGTGATAACTCCAATGGTT +
Preference number: 5 (lower is better)
Translates to: HYLISEELRLMSYLVDSLSIRSS*VITPMV
Trigger: AACCATTGGAGTTATCACCAAACTGGACCTTATGGA...TAGGCTATCTACCAGGTAGCTCATTAAACGTAATTCTTCAGATATGAGATAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp AAATATGTATGGCTTAGGTCTAAGCCCACTATCTCATATCTGAAGAATTACGTTAAAGTCCACAGCAAATaGCTGAACCATCTGCAGCAA +
Preference number: 5 (lower is better)
Translates to: KYVWLRSKPTISYLKNYVKVHSK*LNHLQQ
Trigger: TTGCTGCAGATGGTTCAGCAATTTGCTGTGGACTTT...AACGTAATTCTTCAGATATGAGATAGTGGGCTTAGACCTAAGCCATACATATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp GGAGTAGGTAGTAGCATTAATGGTAGACAACAGAATTACTGTCATCCTAAACAGAAGTTTGCCAGTTTTTaGGTACACTTCTTCACAGTG +
Preference number: 5 (lower is better)
Translates to: GVGSSINGRQQNYCHPKQKFASF*VHFFTV
Trigger: CACTGTGAAGAAGTGTACCAAAAAACTGGCAAACTT...CTGTTTAGGATGACAGTAATTCTGTTGTCTACCATTAATGCTACTACCTACTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp GGAGTAGGTAGTAGCATTAATGGTAGACAACAGAATTACTGTCATCCTAAACAGAGTGCAAAGATGTGCTaGCTAGACATAAAGCTCTTT +
Preference number: 5 (lower is better)
Translates to: GVGSSINGRQQNYCHPKQSAKMC*LDIKLF
Trigger: AAAGAGCTTTATGTCTAGCAAGCACATCTTTGCACT...CTGTTTAGGATGACAGTAATTCTGTTGTCTACCATTAATGCTACTACCTACTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp GAATTACGTTTAATGAGCTACCTGGTAGATAGCCTAGAAAACTTGTCCAAAGCAAGTGCAAAGATGTGCTaGCTAGACATAAAGCTCTTT +
Preference number: 5 (lower is better)
Translates to: ELRLMSYLVDSLENLSKASAKMC*LDIKLF
Trigger: AAAGAGCTTTATGTCTAGCAAGCACATCTTTGCACT...TGCTTTGGACAAGTTTTCTAGGCTATCTACCAGGTAGCTCATTAAACGTAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp CGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGCTTTCGCATAATTGGCTTCTTTCAGTGCTaGATACATTCGAAGCATCTC +
Preference number: 5 (lower is better)
Translates to: RLLMIYCNGYQICCFRIIGFFQC*IHSKHL
Trigger: GAGATGCTTCGAATGTATCAAGCACTGAAAGAAGCC...AATTATGCGAAAGCAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp ATAGGCAATTATGGAGTAGGTAGTAGCATTAATGGTAGACAACAGAATTACTGTGGCTTCTTTCAGTGCTaGATACATTCGAAGCATCTC +
Preference number: 5 (lower is better)
Translates to: IGNYGVGSSINGRQQNYCGFFQC*IHSKHL
Trigger: GAGATGCTTCGAATGTATCAAGCACTGAAAGAAGCC...ACAGTAATTCTGTTGTCTACCATTAATGCTACTACCTACTCCATAATTGCCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp CACTATCTCATATCTGAAGAATTACGTTTAATGAGCTACCTGGTAGATAGCCTAAGTAAAACTGGTTACTaGCCTACTGATGTCCACACA +
Preference number: 5 (lower is better)
Translates to: HYLISEELRLMSYLVDSLSKTGY*PTDVHT
Trigger: TGTGTGGACATCAGTAGGCAAGTAACCAGTTTTACT...TAGGCTATCTACCAGGTAGCTCATTAAACGTAATTCTTCAGATATGAGATAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp TTCAGACTTCATTCAACATTGGCATCTCCTTTTAGCAGAATACAAACCCTTTGGACCTGGATAGGGACTTaGAAATACTGCAACTGTAAA +
Preference number: 5 (lower is better)
Translates to: FRLHSTLASPFSRIQTLWTWIGT*KYCNCK
Trigger: TTTACAGTTGCAGTATTTCAAAGTCCCTATCCAGGT...CCAAAGGGTTTGTATTCTGCTAAAAGGAGATGCCAATGTTGAATGAAGTCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp TATAAAGCCTCTAAAAGGTTAGCAGTTTCTGAGTCAAACCCCAAAGGTTTGACAAGGGAGACATTTCAGTaGGTGAAACCTGATTTACTT +
Preference number: 5 (lower is better)
Translates to: YKASKRLAVSESNPKGLTRETFQ*VKPDLL
Trigger: AAGTAAATCAGGTTTCACCAACTGAAATGTCTCCCT...TGTCAAACCTTTGGGGTTTGACTCAGAAACTGCTAACCTTTTAGAGGCTTTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp GGAGTAGGTAGTAGCATTAATGGTAGACAACAGAATTACTGTCATCCTAAACAGAATGCAGTATGTATCTaGCACATTGGTTCCATTCAC +
Preference number: 5 (lower is better)
Translates to: GVGSSINGRQQNYCHPKQNAVCI*HIGSIH
Trigger: GTGAATGGAACCAATGTGCAAGATACATACTGCATT...CTGTTTAGGATGACAGTAATTCTGTTGTCTACCATTAATGCTACTACCTACTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp AAATATGTATGGCTTAGGTCTAAGCCCACTATCTCATATCTGAAGAATTACGTTGACAAACACTCCTCTTaGAGTTTCCTCTCTCTTGCT +
Preference number: 5 (lower is better)
Translates to: KYVWLRSKPTISYLKNYVDKHSS*SFLSLA
Trigger: AGCAAGAGAGAGGAAACTCAAAGAGGAGTGTTTGTC...AACGTAATTCTTCAGATATGAGATAGTGGGCTTAGACCTAAGCCATACATATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp GAAAAGAAATATGTATGGCTTAGGTCTAAGCCCACTATCTCATATCTGAAGAATAATGGTTCTCAGACCTaGAGGATCAACTTCTTTAGC +
Preference number: 5 (lower is better)
Translates to: EKKYVWLRSKPTISYLKNNGSQT*RINFFS
Trigger: GCTAAAGAAGTTGATCCTCAAGGTCTGAGAACCATT...ATTCTTCAGATATGAGATAGTGGGCTTAGACCTAAGCCATACATATTTCTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp ATTCCAATTAGAGATCTTAAAGATAGGTCTCCAGAGGTTTTACTTCTTACCGAAAATGGTTCTCAGACCTaGAGGATCAACTTCTTTAGC +
Preference number: 5 (lower is better)
Translates to: IPIRDLKDRSPEVLLLTENGSQT*RINFFS
Trigger: GCTAAAGAAGTTGATCCTCAAGGTCTGAGAACCATT...TTCGGTAAGAAGTAAAACCTCTGGAGACCTATCTTTAAGATCTCTAATTGGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp AAATATGTATGGCTTAGGTCTAAGCCCACTATCTCATATCTGAAGAATTACGTTAATGGTTCTCAGACCTaGAGGATCAACTTCTTTAGC +
Preference number: 5 (lower is better)
Translates to: KYVWLRSKPTISYLKNYVNGSQT*RINFFS
Trigger: GCTAAAGAAGTTGATCCTCAAGGTCTGAGAACCATT...AACGTAATTCTTCAGATATGAGATAGTGGGCTTAGACCTAAGCCATACATATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp ATGTCCACACATGCGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGCGCAATTCTTTCTCATaGAACTCCATCTTTACTATC +
Preference number: 5 (lower is better)
Translates to: MSTHATTHDLLQRLSNMLRNSFS*NSIFTI
Trigger: GATAGTAAAGATGGAGTTCAATGAGAAAGAATTGCG...CAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCGCATGTGTGGACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp CAAAACACAAAACCACATTTAGCACAAAGCCAAACCCTGAAGTATATAATCCGTAGTGCAAAGATGTGCTaGCTAGACATAAAGCTCTTT +
Preference number: 5 (lower is better)
Translates to: QNTKPHLAQSQTLKYIIRSAKMC*LDIKLF
Trigger: AAAGAGCTTTATGTCTAGCAAGCACATCTTTGCACT...ACGGATTATATACTTCAGGGTTTGGCTTTGTGCTAAATGTGGTTTTGTGTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp GAATTACGTTTAATGAGCTACCTGGTAGATAGCCTAGAAAACTTGTCCAAAGCAGGTGCATTATTGTTTTaGGAATTAGATCTCGGATAC +
Preference number: 5 (lower is better)
Translates to: ELRLMSYLVDSLENLSKAGALLF*ELDLGY
Trigger: GTATCCGAGATCTAATTCCAAAAACAATAATGCACC...TGCTTTGGACAAGTTTTCTAGGCTATCTACCAGGTAGCTCATTAAACGTAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp GAAAAGAAATATGTATGGCTTAGGTCTAAGCCCACTATCTCATATCTGAAGAATAGTAAAACTGGTTACTaGCCTACTGATGTCCACACA +
Preference number: 5 (lower is better)
Translates to: EKKYVWLRSKPTISYLKNSKTGY*PTDVHT
Trigger: TGTGTGGACATCAGTAGGCAAGTAACCAGTTTTACT...ATTCTTCAGATATGAGATAGTGGGCTTAGACCTAAGCCATACATATTTCTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp ATGTCCACACATGCGACTACTCATGATTTACTGCAACGGTTATCAAATATGTTGACATACAAATCATGTTaGCTACTTTCAAAGGGAGAC +
Preference number: 5 (lower is better)
Translates to: MSTHATTHDLLQRLSNMLTYKSC*LLSKGD
Trigger: GTCTCCCTTTGAAAGTAGCAAACATGATTTGTATGT...CAACATATTTGATAACCGTTGCAGTAAATCATGAGTAGTCGCATGTGTGGACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp CAAAACACAAAACCACATTTAGCACAAAGCCAAACCCTGAAGTATATAATCCGTGGTGCATTATTGTTTTaGGAATTAGATCTCGGATAC +
Preference number: 5 (lower is better)
Translates to: QNTKPHLAQSQTLKYIIRGALLF*ELDLGY
Trigger: GTATCCGAGATCTAATTCCAAAAACAATAATGCACC...ACGGATTATATACTTCAGGGTTTGGCTTTGTGCTAAATGTGGTTTTGTGTTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp CAAAACACAAAACCACATTTAGCACAAAGCCAAACCCTGAAGTATATAATCCGTACATACAAATCATGTTaGCTACTTTCAAAGGGAGAC +
Preference number: 5 (lower is better)
Translates to: QNTKPHLAQSQTLKYIIRTYKSC*LLSKGD
Trigger: GTCTCCCTTTGAAAGTAGCAAACATGATTTGTATGT...ACGGATTATATACTTCAGGGTTTGGCTTTGTGCTAAATGTGGTTTTGTGTTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp ATAGGCAATTATGGAGTAGGTAGTAGCATTAATGGTAGACAACAGAATTACTGTAGACTTCATTCAACATaGGCATCTCCTTTTAGCAGA +
Preference number: 5 (lower is better)
Translates to: IGNYGVGSSINGRQQNYCRLHST*ASPFSR
Trigger: TCTGCTAAAAGGAGATGCCAATGTTGAATGAAGTCT...ACAGTAATTCTGTTGTCTACCATTAATGCTACTACCTACTCCATAATTGCCTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp ATTCCAATTAGAGATCTTAAAGATAGGTCTCCAGAGGTTTTACTTCTTACCGAAAGACTTCATTCAACATaGGCATCTCCTTTTAGCAGA +
Preference number: 5 (lower is better)
Translates to: IPIRDLKDRSPEVLLLTERLHST*ASPFSR
Trigger: TCTGCTAAAAGGAGATGCCAATGTTGAATGAAGTCT...TTCGGTAAGAAGTAAAACCTCTGGAGACCTATCTTTAAGATCTCTAATTGGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp GAAAAGAAATATGTATGGCTTAGGTCTAAGCCCACTATCTCATATCTGAAGAATGGTCCCATTTCATATTaGAGAATTATGGCTACAGTC +
Preference number: 5 (lower is better)
Translates to: EKKYVWLRSKPTISYLKNGPISY*RIMATV
Trigger: GACTGTAGCCATAATTCTCAAATATGAAATGGGACC...ATTCTTCAGATATGAGATAGTGGGCTTAGACCTAAGCCATACATATTTCTTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp ATAGGCAATTATGGAGTAGGTAGTAGCATTAATGGTAGACAACAGAATTACTGTCGCAATTCTTTCTCATaGAACTCCATCTTTACTATC +
Preference number: 5 (lower is better)
Translates to: IGNYGVGSSINGRQQNYCRNSFS*NSIFTI
Trigger: GATAGTAAAGATGGAGTTCAATGAGAAAGAATTGCG...ACAGTAATTCTGTTGTCTACCATTAATGCTACTACCTACTCCATAATTGCCTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp ATTCCAATTAGAGATCTTAAAGATAGGTCTCCAGAGGTTTTACTTCTTACCGAACGCAATTCTTTCTCATaGAACTCCATCTTTACTATC +
Preference number: 5 (lower is better)
Translates to: IPIRDLKDRSPEVLLLTERNSFS*NSIFTI
Trigger: GATAGTAAAGATGGAGTTCAATGAGAAAGAATTGCG...TTCGGTAAGAAGTAAAACCTCTGGAGACCTATCTTTAAGATCTCTAATTGGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp ATAGGCAATTATGGAGTAGGTAGTAGCATTAATGGTAGACAACAGAATTACTGTGGTGCATTATTGTTTTaGGAATTAGATCTCGGATAC +
Preference number: 5 (lower is better)
Translates to: IGNYGVGSSINGRQQNYCGALLF*ELDLGY
Trigger: GTATCCGAGATCTAATTCCAAAAACAATAATGCACC...ACAGTAATTCTGTTGTCTACCATTAATGCTACTACCTACTCCATAATTGCCTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS-3UTR CAA 90 bp CTATGGACATTACCATGTTGTCATGGTAATTATGAGCTTTGTACCTCTCAAAATTCATTTTCAGCTTTGTaGTTCCCTACAGATTTGTCA +
Preference number: 5 (lower is better)
Translates to: LWTLPCCHGNYELCTSQNSFSAL*FPTDLS
Trigger: TGACAAATCTGTAGGGAACAACAAAGCTGAAAATGA...ATTTTGAGAGGTACAAAGCTCATAATTACCATGACAACATGGTAATGTCCATAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627582.3
CDS-3UTR CAA 90 bp ATTCCAATTAGAGATCTTAAAGATAGGTCTCCAGAGGTTTTACTTCTTACCGAATCATCATTTTCAGCTTaGTTGTTCCCTACAGATTTG +
Preference number: 5 (lower is better)
Translates to: IPIRDLKDRSPEVLLLTESSFSA*LFPTDL
Trigger: CAAATCTGTAGGGAACAACAAAGCTGAAAATGATGA...TTCGGTAAGAAGTAAAACCTCTGGAGACCTATCTTTAAGATCTCTAATTGGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627582.3
CDS CCA 72 bp GAGAGGGAATGGCAGGAGCTGGTCCTCGGCCGGATGTaGGCCTTGCGAGGGGAGCACTTAGTGTTGGCCTCC +
Preference number: 6 (lower is better)
Translates to: EREWQELVLGRM*ALRGEHLVLAS
Trigger: GGAGGCCAACACTAAGTGCTCCCCTCGCAAGGCCCACATCCGGCCGAGGACCAGCTCCTGCCATTCCCTCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000485254.2
ENST00000491124.1
ENST00000627582.3
CDS CAA 72 bp GACACTGGGCGGGGCCCTCGTAGGCCTAGATGGAACTaGTGGAGGGGCTCCGAAGGAGTCACTGCTGCTGGG +
Preference number: 6 (lower is better)
Translates to: DTGRGPRRPRWN*WRGSEGVTAAG
Trigger: CCCAGCAGCAGTGACTCCTTCGGAGCCCCTCCACAAGTTCCATCTAGGCCTACGAGGGCCCCGCCCAGTGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000485254.2
ENST00000491124.1
ENST00000627582.3
CDS CAA 90 bp CAGGAGAGGGAATGGCAGGAGCTGGTCCTCGGCCGGATGTGGGCCTaGCGAGGGGAGCACTTAGTGTTGGCCTCCTTTGGGTTGTGGGGC +
Preference number: 6 (lower is better)
Translates to: QEREWQELVLGRMWA*RGEHLVLASFGLWG
Trigger: GCCCCACAACCCAAAGGAGGCCAACACTAAGTGCTCCCCTCGCAAGGCCCACATCCGGCCGAGGACCAGCTCCTGCCATTCCCTCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000485254.2
ENST00000491124.1
ENST00000627582.3
CDS CCA 72 bp GCTTGGGACACTGGGCGGGGCCCTCGTAGGCCTAGATaGAACTTGTGGAGGGGCTCCGAAGGAGTCACTGCT +
Preference number: 6 (lower is better)
Translates to: AWDTGRGPRRPR*NLWRGSEGVTA
Trigger: AGCAGTGACTCCTTCGGAGCCCCTCCACAAGTTCCATCTAGGCCTACGAGGGCCCCGCCCAGTGTCCCAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000627582.3
CDS CCA 72 bp CCTTGGGACACTGGGCGGGGCCCTCGTAGGCCTAGATaGAACTTGTGGAGGGGCTCCGAAGGAGTCACTGCT +
Preference number: 6 (lower is better)
Translates to: PWDTGRGPRRPR*NLWRGSEGVTA
Trigger: AGCAGTGACTCCTTCGGAGCCCCTCCACAAGTTCCATCTAGGCCTACGAGGGCCCCGCCCAGTGTCCCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485254.2
ENST00000491124.1
CDS CAA 72 bp GAATGGCAGGAGCTGGTCCTCGGCCGGATGTGGGCCTaGCGAGGGGAGCACTTAGTGTTGGCCTCCTTTGGG +
Preference number: 6 (lower is better)
Translates to: EWQELVLGRMWA*RGEHLVLASFG
Trigger: CCCAAAGGAGGCCAACACTAAGTGCTCCCCTCGCAAGGCCCACATCCGGCCGAGGACCAGCTCCTGCCATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000485254.2
ENST00000491124.1
ENST00000627582.3
CDS CCA 72 bp GGCCTTGCGAGGGGAGCACTTAGTGTTGGCCTCCTTTaGGTTGTGGGGCTTGGAGGAGGTGACCTGCGAGAG +
Preference number: 6 (lower is better)
Translates to: GLARGALSVGLL*VVGLGGGDLRE
Trigger: CTCTCGCAGGTCACCTCCTCCAAGCCCCACAACCCAAAGGAGGCCAACACTAAGTGCTCCCCTCGCAAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000485254.2
ENST00000491124.1
ENST00000627582.3
CDS CAA 90 bp ATGTGGGCCTTGCGAGGGGAGCACTTAGTGTTGGCCTCCTTTGGGTaGTGGGGCTTGGAGGAGGTGACCTGCGAGAGTGCTGTATCCAGG +
Preference number: 6 (lower is better)
Translates to: MWALRGEHLVLASFG*WGLEEVTCESAVSR
Trigger: CCTGGATACAGCACTCTCGCAGGTCACCTCCTCCAAGCCCCACAACCCAAAGGAGGCCAACACTAAGTGCTCCCCTCGCAAGGCCCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000485254.2
ENST00000491124.1
ENST00000627582.3
CDS TCA 72 bp CTGGAGGGGGTGCCGGAGTGGACACGGTGGCTGTGCTaGTGTCCCCAATTATCCCAAGGGCTTCTTTCAGTG +
Preference number: 6 (lower is better)
Translates to: LEGVPEWTRWLC*CPQLSQGLLSV
Trigger: CACTGAAAGAAGCCCTTGGGATAATTGGGGACATCAGCACAGCCACCGTGTCCACTCCGGCACCCCCTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000485254.2
ENST00000491124.1
ENST00000627582.3
CDS CCA 72 bp CGAGGGGAGCACTTAGTGTTGGCCTCCTTTGGGTTGTaGGGCTTGGAGGAGGTGACCTGCGAGAGTGCTGTA +
Preference number: 6 (lower is better)
Translates to: RGEHLVLASFGL*GLEEVTCESAV
Trigger: TACAGCACTCTCGCAGGTCACCTCCTCCAAGCCCCACAACCCAAAGGAGGCCAACACTAAGTGCTCCCCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000485254.2
ENST00000491124.1
ENST00000627582.3
CDS GCA 72 bp ATGGAACTTGTGGAGGGGCTCCGAAGGAGTCACTGCTaGTGGGGAAAGGAGGTAATGGGCCTGGACGGAATG +
Preference number: 6 (lower is better)
Translates to: MELVEGLRRSHC*WGKEVMGLDGM
Trigger: CATTCCGTCCAGGCCCATTACCTCCTTTCCCCAGCAGCAGTGACTCCTTCGGAGCCCCTCCACAAGTTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000485254.2
ENST00000491124.1
ENST00000627582.3
CDS CAA 72 bp GATGTCCCCAATTATCCCAAGGGCTTCTTTCAGTGCTaGATACATTCGAAGCATCTCATCCCGGCGCTGAGC +
Preference number: 6 (lower is better)
Translates to: DVPNYPKGFFQC*IHSKHLIPALS
Trigger: GCTCAGCGCCGGGATGAGATGCTTCGAATGTATCAAGCACTGAAAGAAGCCCTTGGGATAATTGGGGACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000485254.2
ENST00000491124.1
ENST00000627582.3
CDS CCA 72 bp ACCTGGTCCTTTGTCTTCCCTTCTCGCTCACGAATGTaGTTAGCAACAATCCTTTCCGTTTCCTCGCAGAGT +
Preference number: 6 (lower is better)
Translates to: TWSFVFPSRSRM*LATILSVSSQS
Trigger: ACTCTGCGAGGAAACGGAAAGGATTGTTGCTAACCACATTCGTGAGCGAGAAGGGAAGACAAAGGACCAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000367733.6
ENST00000520906.5
ENST00000523513.1
ENST00000627582.3
CDS CAA 72 bp GCTAGCTTCAGCGCATCTGAGTTTGCAAGATCAGTGTaGGCTGGAGTAACAGCTAAAATCAGACAGTTCTCC +
Preference number: 6 (lower is better)
Translates to: ASFSASEFARSV*AGVTAKIRQFS
Trigger: GGAGAACTGTCTGATTTTAGCTGTTACTCCAGCCAACACTGATCTTGCAAACTCAGATGCGCTGAAGCTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000367733.6
ENST00000520906.5
ENST00000523513.1
ENST00000627582.3
CDS CAA 90 bp ACTTCTTTAGCTAGCTTCAGCGCATCTGAGTTTGCAAGATCAGTGTaGGCTGGAGTAACAGCTAAAATCAGACAGTTCTCCCTCGTGATG +
Preference number: 6 (lower is better)
Translates to: TSLASFSASEFARSV*AGVTAKIRQFSLVM
Trigger: CATCACGAGGGAGAACTGTCTGATTTTAGCTGTTACTCCAGCCAACACTGATCTTGCAAACTCAGATGCGCTGAAGCTAGCTAAAGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000367733.6
ENST00000520906.5
ENST00000523513.1
ENST00000627582.3
CDS CAA 72 bp ACTTCATGTTCTATGGAGAGCAACTGTCCCTGTAGTTaGTTCCTGAAGTTTGGTAGGGTATCCCGAATGTGG +
Preference number: 6 (lower is better)
Translates to: TSCSMESNCPCS*FLKFGRVSRMW
Trigger: CCACATTCGGGATACCCTACCAAACTTCAGGAACAAACTACAGGGACAGTTGCTCTCCATAGAACATGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000367733.6
ENST00000520906.5
ENST00000523513.1
ENST00000627582.3
CDS CAA 90 bp GCCTGGGTTCAAATTTCTGCTTTGCCACCAACTAGCTGTGTGACTTaGGTAAGTTGGTTATCCTCGCCAAGACTAAATGTTCTCATCATC +
Preference number: 6 (lower is better)
Translates to: AWVQISALPPTSCVT*VSWLSSPRLNVLII
Trigger: GATGATGAGAACATTTAGTCTTGGCGAGGATAACCAACTTACCAAAGTCACACAGCTAGTTGGTGGCAAAGCAGAAATTTGAACCCAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS CCA 72 bp GCTTTGCCACCAACTAGCTGTGTGACTTTGGTAAGTTaGTTATCCTCGCCAAGACTAAATGTTCTCATCATC +
Preference number: 6 (lower is better)
Translates to: ALPPTSCVTLVS*LSSPRLNVLII
Trigger: GATGATGAGAACATTTAGTCTTGGCGAGGATAACCAACTTACCAAAGTCACACAGCTAGTTGGTGGCAAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS CAA 72 bp AGAACACACAGCTTGCTACAATCCTCCATAGCTCTTTaGTTTCAAAGCCCTCAAATTCTCCCAATAGCTGCC +
Preference number: 6 (lower is better)
Translates to: RTHSLLQSSIAL*FQSPQILPIAA
Trigger: GGCAGCTATTGGGAGAATTTGAGGGCTTTGAAACAAAAGAGCTATGGAGGATTGTAGCAAGCTGTGTGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491124.1
CDS CAA 72 bp GTCCATGGAACTCTCATGACCTATAGAACACACAGCTaGCTACAATCCTCCATAGCTCTTTTGTTTCAAAGC +
Preference number: 6 (lower is better)
Translates to: VHGTLMTYRTHS*LQSSIALLFQS
Trigger: GCTTTGAAACAAAAGAGCTATGGAGGATTGTAGCAAGCTGTGTGTTCTATAGGTCATGAGAGTTCCATGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491124.1
CDS CAA 72 bp CAAATTTCTGCTTTGCCACCAACTAGCTGTGTGACTTaGGTAAGTTGGTTATCCTCGCCAAGACTAAATGTT +
Preference number: 6 (lower is better)
Translates to: QISALPPTSCVT*VSWLSSPRLNV
Trigger: AACATTTAGTCTTGGCGAGGATAACCAACTTACCAAAGTCACACAGCTAGTTGGTGGCAAAGCAGAAATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367733.6
CDS CAA 90 bp ATGACCTATAGAACACACAGCTTGCTACAATCCTCCATAGCTCTTTaGTTTCAAAGCCCTCAAATTCTCCCAATAGCTGCCAAAATGTCA +
Preference number: 6 (lower is better)
Translates to: MTYRTHSLLQSSIAL*FQSPQILPIAAKMS
Trigger: TGACATTTTGGCAGCTATTGGGAGAATTTGAGGGCTTTGAAACAAAAGAGCTATGGAGGATTGTAGCAAGCTGTGTGTTCTATAGGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491124.1
CDS CAA 90 bp AAGACTTTAGTCCATGGAACTCTCATGACCTATAGAACACACAGCTaGCTACAATCCTCCATAGCTCTTTTGTTTCAAAGCCCTCAAATT +
Preference number: 6 (lower is better)
Translates to: KTLVHGTLMTYRTHS*LQSSIALLFQSPQI
Trigger: AATTTGAGGGCTTTGAAACAAAAGAGCTATGGAGGATTGTAGCAAGCTGTGTGTTCTATAGGTCATGAGAGTTCCATGGACTAAAGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491124.1
CDS GCA 72 bp TCTTTTGTTTCAAAGCCCTCAAATTCTCCCAATAGCTaGCAAAATGTCATTCATTGGGACGGAGTGTTCTTT +
Preference number: 6 (lower is better)
Translates to: SFVSKPSNSPNS*QNVIHWDGVFF
Trigger: AAAGAACACTCCGTCCCAATGAATGACATTTTGGCAGCTATTGGGAGAATTTGAGGGCTTTGAAACAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491124.1
CDS CCA 72 bp AATCTGTTTCTTGACTATCGCTTCAAATGCCATGTCTaGAGTAAACAACCCTGTCCTGATACCATGTATGTT +
Preference number: 6 (lower is better)
Translates to: NLFLDYRFKCHV*SKQPCPDTMYV
Trigger: AACATACATGGTATCAGGACAGGGTTGTTTACTCCAGACATGGCATTTGAAGCGATAGTCAAGAAACAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000367733.6
ENST00000520906.5
ENST00000523513.1
ENST00000627582.3
CDS CAA 72 bp TTCCTTTGCTCTGTATTAAAGAGTGCAAAGATGTGCTaGCTAGACATAAAGCTCTTTTCCACATCCCGAACT +
Preference number: 6 (lower is better)
Translates to: FLCSVLKSAKMC*LDIKLFSTSRT
Trigger: AGTTCGGGATGTGGAAAAGAGCTTTATGTCTAGCAAGCACATCTTTGCACTCTTTAATACAGAGCAAAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000520906.5
ENST00000627582.3
CDS CAA 90 bp TTGTATACATTCCTTTGCTCTGTATTAAAGAGTGCAAAGATGTGCTaGCTAGACATAAAGCTCTTTTCCACATCCCGAACTTTCAGGTTG +
Preference number: 6 (lower is better)
Translates to: LYTFLCSVLKSAKMC*LDIKLFSTSRTFRL
Trigger: CAACCTGAAAGTTCGGGATGTGGAAAAGAGCTTTATGTCTAGCAAGCACATCTTTGCACTCTTTAATACAGAGCAAAGGAATGTATACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000520906.5
ENST00000627582.3
CDS GCA 72 bp GTCTTTGTATACATTCCTTTGCTCTGTATTAAAGAGTaGAAAGATGTGCTTGCTAGACATAAAGCTCTTTTC +
Preference number: 6 (lower is better)
Translates to: VFVYIPLLCIKE*KDVLARHKALF
Trigger: GAAAAGAGCTTTATGTCTAGCAAGCACATCTTTGCACTCTTTAATACAGAGCAAAGGAATGTATACAAAGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355305.9
ENST00000367731.5
ENST00000520906.5
ENST00000627582.3