RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DNM2 (Homo sapiens)

Ensembl gene IDs: ENSG00000079805

Ensembl transcript IDs: ENST00000355667.11, ENST00000359692.10, ENST00000389253.9, ENST00000408974.8, ENST00000585892.5, ENST00000586939.5, ENST00000587329.1, ENST00000587485.1, ENST00000587830.2, ENST00000587991.5, ENST00000588976.1, ENST00000589106.1, ENST00000590787.1, ENST00000590806.5, ENST00000591118.1, ENST00000591266.1, ENST00000591701.5, ENST00000591818.1, ENST00000591819.1, ENST00000593203.1, ENST00000593220.1, ENST00000681972.1, ENST00000682285.1, ENST00000682524.1, ENST00000683738.1

Found 787 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCAGGCCTGCCAGCTGGGCACTACCGAGCCCACTGGGCCAGGCTTaGCGCTGGGGAGCTCCTGCTAATGGGAAGTTGATATACCCCTGC +
Preference number: 1 (lower is better)
Translates to: LRPASWALPSPLGQA*RWGAPANGKLIYPC
Trigger: GCAGGGGTATATCAACTTCCCATTAGCAGGAGCTCCCCAGCGGCAAGCCTGGCCCAGTGGGCTCGGTAGTGCCCAGCTGGCAGGCCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR CCA 90 bp CCTGCCAGCTGGGCACTACCGAGCCCACTGGGCCAGGCTTGCCGCTaGGGAGCTCCTGCTAATGGGAAGTTGATATACCCCTGCACCCCA +
Preference number: 1 (lower is better)
Translates to: PASWALPSPLGQACR*GAPANGKLIYPCTP
Trigger: TGGGGTGCAGGGGTATATCAACTTCCCATTAGCAGGAGCTCCCCAGCGGCAAGCCTGGCCCAGTGGGCTCGGTAGTGCCCAGCTGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR CCA 90 bp CTCTGGCAGCCGAGGCTGGGCCAGGCTCAGGCTGTGTGGTTAATATaGCCGGGAAGGACTATGTACACCTCAGGCCTGCCAGCTGGGCAC +
Preference number: 1 (lower is better)
Translates to: LWQPRLGQAQAVWLI*PGRTMYTSGLPAGH
Trigger: GTGCCCAGCTGGCAGGCCTGAGGTGTACATAGTCCTTCCCGGCCATATTAACCACACAGCCTGAGCCTGGCCCAGCCTCGGCTGCCAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR CCA 90 bp CAAAGGCACCTCTGGCAGCCGAGGCTGGGCCAGGCTCAGGCTGTGTaGTTAATATGGCCGGGAAGGACTATGTACACCTCAGGCCTGCCA +
Preference number: 1 (lower is better)
Translates to: QRHLWQPRLGQAQAV*LIWPGRTMYTSGLP
Trigger: TGGCAGGCCTGAGGTGTACATAGTCCTTCCCGGCCATATTAACCACACAGCCTGAGCCTGGCCCAGCCTCGGCTGCCAGAGGTGCCTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR CCA 90 bp GAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGGAGTaGGTGAGGTCTCCTCAGAGAGAGGCCGCCCTGGGCCCACCCATC +
Preference number: 1 (lower is better)
Translates to: EYRVQALTVVKLSEE*VRSPQREAALGPPI
Trigger: GATGGGTGGGCCCAGGGCGGCCTCTCTCTGAGGAGACCTCACCCACTCCTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR-3UTR TCA 90 bp GGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCAAGGGCCCCAGACCACTaGAGCTCCTGCGCCGCGGGT +
Preference number: 2 (lower is better)
Translates to: GQGRPGPTAPGLAKAPLARAPDH*SSCAAG
Trigger: ACCCGCGGCGCAGGAGCTTCAGTGGTCTGGGGCCCT...TGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR-3UTR TCA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGAGGGCCCCAGACCACTaGAGCTCCTGCGCCGCGGGT +
Preference number: 2 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRRAPDH*SSCAAG
Trigger: ACCCGCGGCGCAGGAGCTTCAGTGGTCTGGGGCCCT...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
3UTR-3UTR GCA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGGGAAGAGGCCAGGGCTaGCCACTGGGAGCCTGGTCC +
Preference number: 2 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRGRGQG*PLGAWS
Trigger: GGACCAGGCTCCCAGTGGGCAGCCCTGGCCTCTTCC...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
3UTR-3UTR GCA 90 bp GCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCAGCGGAAGAGGCCAGGGCTaGCCACTGGGAGCCTGGTCC +
Preference number: 2 (lower is better)
Translates to: ARPARANGSGPSKGTSGSGRGQG*PLGAWS
Trigger: GGACCAGGCTCCCAGTGGGCAGCCCTGGCCTCTTCC...GCTGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR-3UTR GCA 90 bp GCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCAGCCCACTGGGCCAGGCTTaGCGCTGGGGAGCTCCTGCT +
Preference number: 2 (lower is better)
Translates to: ARPARANGSGPSKGTSGSPLGQA*RWGAPA
Trigger: AGCAGGAGCTCCCCAGCGGCAAGCCTGGCCCAGTGG...GCTGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR-3UTR TCA 90 bp ATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGAGGGCCCCAGACCACTaGAGCTCCTGCGCCGCGGGT +
Preference number: 2 (lower is better)
Translates to: IGQGRPGPTAPGLAKAPLRAPDH*SSCAAG
Trigger: ACCCGCGGCGCAGGAGCTTCAGTGGTCTGGGGCCCT...CAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR-3UTR CCA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCTGCCCACTGGGAGCCTaGTCCCAGCATAGGGGCGGC +
Preference number: 2 (lower is better)
Translates to: LELQGPFAQCGVQPGTGACPLGA*SQHRGG
Trigger: GCCGCCCCTATGCTGGGACCAGGCTCCCAGTGGGCA...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
3UTR-3UTR CCA 90 bp GGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCACTCAGGCCTGCCAGCTaGGCACTACCGAGCCCACTG +
Preference number: 2 (lower is better)
Translates to: GQGRPGPTAPGLAKAPLALRPAS*ALPSPL
Trigger: CAGTGGGCTCGGTAGTGCCCAGCTGGCAGGCCTGAG...TGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR-3UTR CCA 90 bp ATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGTGCCCACTGGGAGCCTaGTCCCAGCATAGGGGCGGC +
Preference number: 2 (lower is better)
Translates to: IGQGRPGPTAPGLAKAPLCPLGA*SQHRGG
Trigger: GCCGCCCCTATGCTGGGACCAGGCTCCCAGTGGGCA...CAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR-3UTR GCA 90 bp AATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTCCACTGGGCCAGGCTTaGCGCTGGGGAGCTCCTGCT +
Preference number: 2 (lower is better)
Translates to: NRARPARANGSGPSKGTSPLGQA*RWGAPA
Trigger: AGCAGGAGCTCCCCAGCGGCAAGCCTGGCCCAGTGG...AGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTATT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR-3UTR CCA 90 bp ATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCCAGGGCTGCCCACTaGGAGCCTGGTCCCAGCATA +
Preference number: 2 (lower is better)
Translates to: IGQGRPGPTAPGLAKAPLARAAH*EPGPSI
Trigger: TATGCTGGGACCAGGCTCCCAGTGGGCAGCCCTGGC...CAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR-3UTR CCA 90 bp ATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGCACCCCAGCAAGGCCTaGGGATGTAGGCGCCCTTGG +
Preference number: 2 (lower is better)
Translates to: IGQGRPGPTAPGLAKAPLHPSKA*GCRRPW
Trigger: CCAAGGGCGCCTACATCCCCAGGCCTTGCTGGGGTG...CAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR-3UTR CCA 90 bp ATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGGCCAGGCTTGCCGCTaGGGAGCTCCTGCTAATGGG +
Preference number: 2 (lower is better)
Translates to: IGQGRPGPTAPGLAKAPLGQACR*GAPANG
Trigger: CCCATTAGCAGGAGCTCCCCAGCGGCAAGCCTGGCC...CAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR-3UTR GCA 90 bp GGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCAAAGTTGATATACCCCTaGACCCCAGCAAGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: GQGRPGPTAPGLAKAPLAKLIYP*TPARPG
Trigger: CCCAGGCCTTGCTGGGGTGCAGGGGTATATCAACTT...TGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR-3UTR GCA 90 bp ATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGTGTACACCTCAGGCCTaGCAGCTGGGCACTACCGAG +
Preference number: 2 (lower is better)
Translates to: IGQGRPGPTAPGLAKAPLCTPQA*QLGTTE
Trigger: CTCGGTAGTGCCCAGCTGGCAGGCCTGAGGTGTACA...CAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR-3UTR CCA 90 bp GCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCAGCAAGGCCTGCCCTACATaGGCTTTCCCAGCCCAAGAA +
Preference number: 2 (lower is better)
Translates to: ARPARANGSGPSKGTSGSKACPT*AFPAQE
Trigger: TTCTTGGGCTGGGAAAGCCCATGTAGGGCAGGCCTT...GCTGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR-3UTR GCA 90 bp GGGGATGTAGGCGCCCTTGGTGCCCGCACTTATAGAAGGCCTGCCCTACATGGGGCTCCAGGGCCCCTTTaGGCAGTGCGGTGTCCAGCC +
Preference number: 2 (lower is better)
Translates to: GDVGALGARTYRRPALHGAPGPL*AVRCPA
Trigger: GGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGC...CCCATGTAGGGCAGGCCTTCTATAAGTGCGGGCACCAAGGGCGCCTACATCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR-3UTR GCA 90 bp GGGGATGTAGGCGCCCTTGGTGCCCGCACTTATAGAAGGCCTGCCCTACATGGGGGCCCCTTTGCGCAGTaGGGTGTCCAGCCAGGCACA +
Preference number: 2 (lower is better)
Translates to: GDVGALGARTYRRPALHGGPFAQ*GVQPGT
Trigger: TGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCC...CCCATGTAGGGCAGGCCTTCTATAAGTGCGGGCACCAAGGGCGCCTACATCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR-3UTR GCA 90 bp AATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTAAGTTGATATACCCCTaGACCCCAGCAAGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: NRARPARANGSGPSKGTSKLIYP*TPARPG
Trigger: CCCAGGCCTTGCTGGGGTGCAGGGGTATATCAACTT...AGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR-3UTR CCA 90 bp AGGCTGGGCCAGGCTCAGGCTGTGTGGTTAATATGGCCGGGAAGGACTATGTACCACAGGGGCCGGCCCTaGACCGGGGCCAGCGTTAAG +
Preference number: 2 (lower is better)
Translates to: RLGQAQAVWLIWPGRTMYHRGRP*TGASVK
Trigger: CTTAACGCTGGCCCCGGTCCAGGGCCGGCCCCTGTG...GTACATAGTCCTTCCCGGCCATATTAACCACACAGCCTGAGCCTGGCCCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR-3UTR CCA 90 bp GGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCAGCTGTGTGGTTAATATaGCCGGGAAGGACTATGTAC +
Preference number: 2 (lower is better)
Translates to: GQGRPGPTAPGLAKAPLAAVWLI*PGRTMY
Trigger: GTACATAGTCCTTCCCGGCCATATTAACCACACAGC...TGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR-3UTR CCA 90 bp AATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTCAGGCTCAGGCTGTGTaGTTAATATGGCCGGGAAGG +
Preference number: 2 (lower is better)
Translates to: NRARPARANGSGPSKGTSQAQAV*LIWPGR
Trigger: CCTTCCCGGCCATATTAACCACACAGCCTGAGCCTG...AGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTATT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR-3UTR CCA 90 bp TGTGTGGTTAATATGGCCGGGAAGGACTATGTACACCTCAGGCCTGCCAGCTGGCACAGGGGCCGGCCCTaGACCGGGGCCAGCGTTAAG +
Preference number: 2 (lower is better)
Translates to: CVVNMAGKDYVHLRPASWHRGRP*TGASVK
Trigger: CTTAACGCTGGCCCCGGTCCAGGGCCGGCCCCTGTG...CCAGCTGGCAGGCCTGAGGTGTACATAGTCCTTCCCGGCCATATTAACCACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR-3UTR CCA 90 bp AATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTACCCCTCATTCAGGATaGTGTCAAGGGTTCTGGTCC +
Preference number: 2 (lower is better)
Translates to: NRARPARANGSGPSKGTSTPHSG*CQGFWS
Trigger: GGACCAGAACCCTTGACACCATCCTGAATGAGGGGT...AGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR-3UTR GCA 90 bp TGTGTGGTTAATATGGCCGGGAAGGACTATGTACACCTCAGGCCTGCCAGCTGGGGAAGAGGCCAGGGCTaGCCACTGGGAGCCTGGTCC +
Preference number: 2 (lower is better)
Translates to: CVVNMAGKDYVHLRPASWGRGQG*PLGAWS
Trigger: GGACCAGGCTCCCAGTGGGCAGCCCTGGCCTCTTCC...CCAGCTGGCAGGCCTGAGGTGTACATAGTCCTTCCCGGCCATATTAACCACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR-3UTR GCA 90 bp AGGCTGGGCCAGGCTCAGGCTGTGTGGTTAATATGGCCGGGAAGGACTATGTACGGCCCCTTTGCGCAGTaGGGTGTCCAGCCAGGCACA +
Preference number: 2 (lower is better)
Translates to: RLGQAQAVWLIWPGRTMYGPFAQ*GVQPGT
Trigger: TGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCC...GTACATAGTCCTTCCCGGCCATATTAACCACACAGCCTGAGCCTGGCCCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR-3UTR CCA 90 bp AGGCTGGGCCAGGCTCAGGCTGTGTGGTTAATATGGCCGGGAAGGACTATGTACCACCCCAGCAAGGCCTaGGGATGTAGGCGCCCTTGG +
Preference number: 2 (lower is better)
Translates to: RLGQAQAVWLIWPGRTMYHPSKA*GCRRPW
Trigger: CCAAGGGCGCCTACATCCCCAGGCCTTGCTGGGGTG...GTACATAGTCCTTCCCGGCCATATTAACCACACAGCCTGAGCCTGGCCCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR-3UTR CCA 90 bp TGTGTGGTTAATATGGCCGGGAAGGACTATGTACACCTCAGGCCTGCCAGCTGGGCCAGGGCTGCCCACTaGGAGCCTGGTCCCAGCATA +
Preference number: 2 (lower is better)
Translates to: CVVNMAGKDYVHLRPASWARAAH*EPGPSI
Trigger: TATGCTGGGACCAGGCTCCCAGTGGGCAGCCCTGGC...CCAGCTGGCAGGCCTGAGGTGTACATAGTCCTTCCCGGCCATATTAACCACACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR-3UTR CCA 90 bp AATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGCTGTGTGGTTAATATaGCCGGGAAGGACTATGTAC +
Preference number: 2 (lower is better)
Translates to: NRARPARANGSGPSKGTSAVWLI*PGRTMY
Trigger: GTACATAGTCCTTCCCGGCCATATTAACCACACAGC...AGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR-3UTR CCA 90 bp ACTTACAGTGGTCAAACTGAGCGAGGAGTGGGTGAGGTCTCCTCAGAGAGAGGCTCTGGCAGCCGAGGCTaGGCCAGGCTCAGGCTGTGT +
Preference number: 2 (lower is better)
Translates to: TYSGQTERGVGEVSSERGSGSRG*ARLRLC
Trigger: ACACAGCCTGAGCCTGGCCCAGCCTCGGCTGCCAGA...GCCTCTCTCTGAGGAGACCTCACCCACTCCTCGCTCAGTTTGACCACTGTAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR-3UTR TCA 90 bp CTGTTTCCTCGCAAGCCAAATAGGGATGAGGACGATTCCTCCACTCCAGCAGCTCTCACTGGGAGGAAGTaGGACAGGAGGAGAGACCCC +
Preference number: 2 (lower is better)
Translates to: LFPRKPNRDEDDSSTPAALTGRK*DRRRDP
Trigger: GGGGTCTCTCCTCCTGTCTCACTTCCTCCCAGTGAG...AGCTGCTGGAGTGGAGGAATCGTCCTCATCCCTATTTGGCTTGCGAGGAAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589106.1
3UTR-3UTR TCA 90 bp ATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGGAGTGAGGGCCCCAGACCACTaGAGCTCCTGCGCCGCGGGT +
Preference number: 2 (lower is better)
Translates to: INRIQSAGTYSGQTERGVRAPDH*SSCAAG
Trigger: ACCCGCGGCGCAGGAGCTTCAGTGGTCTGGGGCCCT...CACTCCTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR-3UTR CCA 90 bp ACTTACAGTGGTCAAACTGAGCGAGGAGTGGGTGAGGTCTCCTCAGAGAGAGGCAAGGCCTGCCCTACATaGGCTTTCCCAGCCCAAGAA +
Preference number: 2 (lower is better)
Translates to: TYSGQTERGVGEVSSERGKACPT*AFPAQE
Trigger: TTCTTGGGCTGGGAAAGCCCATGTAGGGCAGGCCTT...GCCTCTCTCTGAGGAGACCTCACCCACTCCTCGCTCAGTTTGACCACTGTAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR-3UTR TCA 90 bp TGTGTGGTTAATATGGCCGGGAAGGACTATGTACACCTCAGGCCTGCCAGCTGGCTGCTAATGGGAAGTTaGTATACCCCTGCACCCCAG +
Preference number: 2 (lower is better)
Translates to: CVVNMAGKDYVHLRPASWLLMGS*YTPAPQ
Trigger: CTGGGGTGCAGGGGTATATCAACTTCCCATTAGCAG...CCAGCTGGCAGGCCTGAGGTGTACATAGTCCTTCCCGGCCATATTAACCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR-3UTR CCA 90 bp ATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGGAGTGTGCCCACTGGGAGCCTaGTCCCAGCATAGGGGCGGC +
Preference number: 2 (lower is better)
Translates to: INRIQSAGTYSGQTERGVCPLGA*SQHRGG
Trigger: GCCGCCCCTATGCTGGGACCAGGCTCCCAGTGGGCA...CACTCCTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR-3UTR CCA 90 bp TGTGTGGTTAATATGGCCGGGAAGGACTATGTACACCTCAGGCCTGCCAGCTGGACCCCTCATTCAGGATaGTGTCAAGGGTTCTGGTCC +
Preference number: 2 (lower is better)
Translates to: CVVNMAGKDYVHLRPASWTPHSG*CQGFWS
Trigger: GGACCAGAACCCTTGACACCATCCTGAATGAGGGGT...CCAGCTGGCAGGCCTGAGGTGTACATAGTCCTTCCCGGCCATATTAACCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR-3UTR CCA 90 bp ATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGGAGTGAGAGAGAGGCCGCCCTaGGCCCACCCATCAGGGAGG +
Preference number: 2 (lower is better)
Translates to: INRIQSAGTYSGQTERGVRERPP*AHPSGR
Trigger: CCTCCCTGATGGGTGGGCCCAGGGCGGCCTCTCTCT...CACTCCTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR-3UTR CCA 90 bp ATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGGAGTGTCTGGCAGCCGAGGCTaGGCCAGGCTCAGGCTGTGT +
Preference number: 2 (lower is better)
Translates to: INRIQSAGTYSGQTERGVSGSRG*ARLRLC
Trigger: ACACAGCCTGAGCCTGGCCCAGCCTCGGCTGCCAGA...CACTCCTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR-3UTR CCA 90 bp AGTTTATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGCACTACCGAGCCCACTaGGCCAGGCTTGCCGCTGGG +
Preference number: 2 (lower is better)
Translates to: SLLIEYRVQALTVVKLSEHYRAH*ARLAAG
Trigger: CCCAGCGGCAAGCCTGGCCCAGTGGGCTCGGTAGTG...CTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAATAAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR-3UTR TCA 90 bp AGTTTATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGCCCCCTCTGCCACCCTaGGACTCCATCCCCCAAAGT +
Preference number: 2 (lower is better)
Translates to: SLLIEYRVQALTVVKLSEPPLPP*DSIPQS
Trigger: ACTTTGGGGGATGGAGTCTCAGGGTGGCAGAGGGGG...CTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAATAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR-3UTR CCA 90 bp ATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGGAGTGCAGGCTCAGGCTGTGTaGTTAATATGGCCGGGAAGG +
Preference number: 2 (lower is better)
Translates to: INRIQSAGTYSGQTERGVQAQAV*LIWPGR
Trigger: CCTTCCCGGCCATATTAACCACACAGCCTGAGCCTG...CACTCCTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR-3UTR CAA 90 bp ATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGAGCTCCAGGGCCCCTTaGCGCAGTGCGGTGTCCAGC +
Preference number: 3 (lower is better)
Translates to: IGQGRPGPTAPGLAKAPLSSRAP*RSAVSS
Trigger: GCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCT...CAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR CCA 72 bp GCCGGGAAGGACTATGTACACCTCAGGCCTGCCAGCTaGGCACTACCGAGCCCACTGGGCCAGGCTTGCCGC +
Preference number: 3 (lower is better)
Translates to: AGKDYVHLRPAS*ALPSPLGQACR
Trigger: GCGGCAAGCCTGGCCCAGTGGGCTCGGTAGTGCCCAGCTGGCAGGCCTGAGGTGTACATAGTCCTTCCCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR GCA 72 bp GCCAGCTGGGCACTACCGAGCCCACTGGGCCAGGCTTaGCGCTGGGGAGCTCCTGCTAATGGGAAGTTGATA +
Preference number: 3 (lower is better)
Translates to: ASWALPSPLGQA*RWGAPANGKLI
Trigger: TATCAACTTCCCATTAGCAGGAGCTCCCCAGCGGCAAGCCTGGCCCAGTGGGCTCGGTAGTGCCCAGCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR-3UTR CAA 90 bp ATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGCCTGCTAATGGGAAGTaGATATACCCCTGCACCCCA +
Preference number: 3 (lower is better)
Translates to: IGQGRPGPTAPGLAKAPLPANGK*IYPCTP
Trigger: TGGGGTGCAGGGGTATATCAACTTCCCATTAGCAGG...CAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR-3UTR CAA 90 bp AGGCTGGGCCAGGCTCAGGCTGTGTGGTTAATATGGCCGGGAAGGACTATGTACAGCTCCAGGGCCCCTTaGCGCAGTGCGGTGTCCAGC +
Preference number: 3 (lower is better)
Translates to: RLGQAQAVWLIWPGRTMYSSRAP*RSAVSS
Trigger: GCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCT...GTACATAGTCCTTCCCGGCCATATTAACCACACAGCCTGAGCCTGGCCCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR CCA 72 bp GTGCAGGCACTTACAGTGGTCAAACTGAGCGAGGAGTaGGTGAGGTCTCCTCAGAGAGAGGCCGCCCTGGGC +
Preference number: 3 (lower is better)
Translates to: VQALTVVKLSEE*VRSPQREAALG
Trigger: GCCCAGGGCGGCCTCTCTCTGAGGAGACCTCACCCACTCCTCGCTCAGTTTGACCACTGTAAGTGCCTGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
3UTR-3UTR CAA 90 bp AGGCTGGGCCAGGCTCAGGCTGTGTGGTTAATATGGCCGGGAAGGACTATGTACCCTGCTAATGGGAAGTaGATATACCCCTGCACCCCA +
Preference number: 3 (lower is better)
Translates to: RLGQAQAVWLIWPGRTMYPANGK*IYPCTP
Trigger: TGGGGTGCAGGGGTATATCAACTTCCCATTAGCAGG...GTACATAGTCCTTCCCGGCCATATTAACCACACAGCCTGAGCCTGGCCCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR GCA 90 bp GCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCAGCCTTCCATCCCGCGGTTaGCCATGGCGCCGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: ARPARANGSGPSKGTSGSLPSRG*PWRRRP
Trigger: GGGCCGCCGGCGCCATGGGCAACCGCGGGATGGAAG...GCTGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR GCA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGCTTCCATCCCGCGGTTaGCCATGGCGCCGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRLPSRG*PWRRRP
Trigger: GGGCCGCCGGCGCCATGGGCAACCGCGGGATGGAAG...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGCACAGGGGCCGGCCCTaGACCGGGGCCAGCGTTAAG +
Preference number: 4 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRHRGRP*TGASVK
Trigger: CTTAACGCTGGCCCCGGTCCAGGGCCGGCCCCTGTG...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR TCA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCAGGGCCCCAGACCACTaGAGCTCCTGCGCCGCGGGT +
Preference number: 4 (lower is better)
Translates to: LELQGPFAQCGVQPGTGARAPDH*SSCAAG
Trigger: ACCCGCGGCGCAGGAGCTTCAGTGGTCTGGGGCCCT...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR GCA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGGCTCCAGGGCCCCTTTaGGCAGTGCGGTGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRAPGPL*AVRCPA
Trigger: GGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGC...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR GCA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGCCACTGGGCCAGGCTTaGCGCTGGGGAGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRPLGQA*RWGAPA
Trigger: AGCAGGAGCTCCCCAGCGGCAAGCCTGGCCCAGTGG...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGTCGGCGCTGTGGAGTaGGGCTGTGGCTGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: LELQGPFAQCGVQPGTGAVGAVE*GCGCWR
Trigger: GCGCCAGCAGCCACAGCCCCACTCCACAGCGCCGAC...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp GCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCAGCCACCGGTCGGCGCTGTaGAGTGGGGCTGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: ARPARANGSGPSKGTSGSHRSAL*SGAVAA
Trigger: AGCAGCCACAGCCCCACTCCACAGCGCCGACCGGTG...GCTGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp GCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCAGCGGGTCCAGGCCGGGATaGGATTGGGGGCGCCGAGAA +
Preference number: 4 (lower is better)
Translates to: ARPARANGSGPSKGTSGSGSRPG*DWGRRE
Trigger: TTCTCGGCGCCCCCAATCCCATCCCGGCCTGGACCC...GCTGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGGGGTCCAGGCCGGGATaGGATTGGGGGCGCCGAGAA +
Preference number: 4 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRGSRPG*DWGRRE
Trigger: TTCTCGGCGCCCCCAATCCCATCCCGGCCTGGACCC...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGTGCCCACTGGGAGCCTaGTCCCAGCATAGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRCPLGA*SQHRGG
Trigger: GCCGCCCCTATGCTGGGACCAGGCTCCCAGTGGGCA...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp GGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCACACTACCGAGCCCACTaGGCCAGGCTTGCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: GQGRPGPTAPGLAKAPLAHYRAH*ARLAAG
Trigger: CCCAGCGGCAAGCCTGGCCCAGTGGGCTCGGTAGTG...TGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGAGAGAGAGGCCGCCCTaGGCCCACCCATCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRRERPP*AHPSGR
Trigger: CCTCCCTGATGGGTGGGCCCAGGGCGGCCTCTCTCT...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp GGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCAAGAGAGAGGCCGCCCTaGGCCCACCCATCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: GQGRPGPTAPGLAKAPLARERPP*AHPSGR
Trigger: CCTCCCTGATGGGTGGGCCCAGGGCGGCCTCTCTCT...TGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR TCA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGCAGCCGACTCCTCCATaGGGCTGCTCTGGTCTGCCG +
Preference number: 4 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRQPTPP*GCSGLP
Trigger: CGGCAGACCAGAGCAGCCTCATGGAGGAGTCGGCTG...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR GCA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCCGCCGAGAAGGAGGCTaGTGCCCCCACGGGAACAGG +
Preference number: 4 (lower is better)
Translates to: LELQGPFAQCGVQPGTGARREGG*CPHGNR
Trigger: CCTGTTCCCGTGGGGGCAGCAGCCTCCTTCTCGGCG...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR GCA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGGGCCCCTTTGCGCAGTaGGGTGTCCAGCCAGGCACA +
Preference number: 4 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRGPFAQ*GVQPGT
Trigger: TGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCC...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR GCA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGCTCCAGGGCCCCTTTaGGCAGTGCGGTGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: LELQGPFAQCGVQPGTGAAPGPL*AVRCPA
Trigger: GGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGC...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGTGTGGAGTGGGGCTGTaGCTGCTGGCGCTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRCGVGL*LLALWS
Trigger: GCTCCAGAGCGCCAGCAGCCACAGCCCCACTCCACA...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp TGGGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCGTCGGCGCTGTGGAGTaGGGCTGTGGCTGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: WEPGPSIGAAEGPRPLKLVGAVE*GCGCWR
Trigger: GCGCCAGCAGCCACAGCCCCACTCCACAGCGCCGAC...GAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCCACCGGTCGGCGCTGTaGAGTGGGGCTGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LELQGPFAQCGVQPGTGAHRSAL*SGAVAA
Trigger: AGCAGCCACAGCCCCACTCCACAGCGCCGACCGGTG...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCAGGCCGGGATGGGATTaGGGGCGCCGAGAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: LELQGPFAQCGVQPGTGARPGWD*GRREGG
Trigger: GCCTCCTTCTCGGCGCCCCCAATCCCATCCCGGCCT...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGTCCTGGGGGAATCCCTaGGGGGATCCGAACTGGCCG +
Preference number: 4 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRSWGNP*GDPNWP
Trigger: CGGCCAGTTCGGATCCCCCCAGGGATTCCCCCAGGA...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGCAGGGATGGCTCGGCTaGGCGGATAATGGTGGGCCG +
Preference number: 4 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRQGWLG*ADNGGP
Trigger: CGGCCCACCATTATCCGCCCAGCCGAGCCATCCCTG...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp TGGGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCACAGGGGCCGGCCCTaGACCGGGGCCAGCGTTAAG +
Preference number: 4 (lower is better)
Translates to: WEPGPSIGAAEGPRPLKLHRGRP*TGASVK
Trigger: CTTAACGCTGGCCCCGGTCCAGGGCCGGCCCCTGTG...GAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp GCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCAGCCACCCCAGCAAGGCCTaGGGATGTAGGCGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: ARPARANGSGPSKGTSGSHPSKA*GCRRPW
Trigger: CCAAGGGCGCCTACATCCCCAGGCCTTGCTGGGGTG...GCTGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCCACTACCGAGCCCACTaGGCCAGGCTTGCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: LELQGPFAQCGVQPGTGAHYRAH*ARLAAG
Trigger: CCCAGCGGCAAGCCTGGCCCAGTGGGCTCGGTAGTG...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGTCTGGCAGCCGAGGCTaGGCCAGGCTCAGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRSGSRG*ARLRLC
Trigger: ACACAGCCTGAGCCTGGCCCAGCCTCGGCTGCCAGA...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCAGAGAGAGGCCGCCCTaGGCCCACCCATCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: LELQGPFAQCGVQPGTGARERPP*AHPSGR
Trigger: CCTCCCTGATGGGTGGGCCCAGGGCGGCCTCTCTCT...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR TCA 90 bp GCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCAGCCTTCCTTGGCCAGCTTaGGGGCGTCGGAGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: ARPARANGSGPSKGTSGSLPWPA*GRRSWP
Trigger: TGGCCAACTCCGACGCCCTCAAGCTGGCCAAGGAAG...GCTGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR TCA 90 bp GGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCACTTCCTTGGCCAGCTTaGGGGCGTCGGAGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: GQGRPGPTAPGLAKAPLALPWPA*GRRSWP
Trigger: TGGCCAACTCCGACGCCCTCAAGCTGGCCAAGGAAG...TGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR TCA 90 bp GGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCACGTGGAAGATGCGATTaGTTCGGGCGCCCCCGGAGA +
Preference number: 4 (lower is better)
Translates to: GQGRPGPTAPGLAKAPLARGRCD*FGRPRR
Trigger: TCTCCGGGGGCGCCCGAATCAATCGCATCTTCCACG...TGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR TCA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCCAGCCGACTCCTCCATaGGGCTGCTCTGGTCTGCCG +
Preference number: 4 (lower is better)
Translates to: LELQGPFAQCGVQPGTGAQPTPP*GCSGLP
Trigger: CGGCAGACCAGAGCAGCCTCATGGAGGAGTCGGCTG...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR TCA 90 bp GGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCACCCCCTCTGCCACCCTaGGACTCCATCCCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: GQGRPGPTAPGLAKAPLAPPLPP*DSIPQS
Trigger: ACTTTGGGGGATGGAGTCTCAGGGTGGCAGAGGGGG...TGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR GCA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGCCCACTACAGCGATCTaGGGCAGGTCCAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRPTTAI*GRSRWQ
Trigger: CTGCCACCTGGACCTGCCGCAGATCGCTGTAGTGGG...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR GCA 90 bp GCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCAGCCGTCCCTGGCGTCGGTaGCCTCGTCCATCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: ARPARANGSGPSKGTSGSRPWRR*PRPSGQ
Trigger: TTGACCTGATGGACGAGGGCACCGACGCCAGGGACG...GCTGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR GCA 90 bp ATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGCGCCGAGAAGGAGGCTaGTGCCCCCACGGGAACAGG +
Preference number: 4 (lower is better)
Translates to: IGQGRPGPTAPGLAKAPLRREGG*CPHGNR
Trigger: CCTGTTCCCGTGGGGGCAGCAGCCTCCTTCTCGGCG...CAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR GCA 90 bp ATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGGAAGAGGCCAGGGCTaGCCACTGGGAGCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: IGQGRPGPTAPGLAKAPLGRGQG*PLGAWS
Trigger: GGACCAGGCTCCCAGTGGGCAGCCCTGGCCTCTTCC...CAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTAT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR GCA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGCCCCTTTGCGCAGTaGGGTGTCCAGCCAGGCACA +
Preference number: 4 (lower is better)
Translates to: LELQGPFAQCGVQPGTGAGPFAQ*GVQPGT
Trigger: TGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCC...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR GCA 90 bp GGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCATGGTCAGCCAGCCCCTaGGGATCACCAGGATCTCCC +
Preference number: 4 (lower is better)
Translates to: GQGRPGPTAPGLAKAPLAWSASP*GSPGSP
Trigger: GGGAGATCCTGGTGATCCGCAGGGGCTGGCTGACCA...TGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355667.11
ENST00000389253.9
CDS-3UTR CCA 90 bp ATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGCGACCCTCAACGACCTaGCCCCGCGGCGTCTGTAGC +
Preference number: 4 (lower is better)
Translates to: IGQGRPGPTAPGLAKAPLRPSTT*PRGVCS
Trigger: GCTACAGACGCCGCGGGGCCAGGTCGTTGAGGGTCG...CAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp GGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCATCCAGGTGGCAGCTCTaGCCGATGGAGCTGAAGGCG +
Preference number: 4 (lower is better)
Translates to: GQGRPGPTAPGLAKAPLASRWQL*PMELKA
Trigger: CGCCTTCAGCTCCATCGGCCAGAGCTGCCACCTGGA...TGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp ATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGCACCGGTCGGCGCTGTaGAGTGGGGCTGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: IGQGRPGPTAPGLAKAPLHRSAL*SGAVAA
Trigger: AGCAGCCACAGCCCCACTCCACAGCGCCGACCGGTG...CAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp ATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGAGGCCGGGATGGGATTaGGGGCGCCGAGAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: IGQGRPGPTAPGLAKAPLRPGWD*GRREGG
Trigger: GCCTCCTTCTCGGCGCCCCCAATCCCATCCCGGCCT...CAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTAGGCCGGGATGGGATTaGGGGCGCCGAGAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPRPGWD*GRREGG
Trigger: GCCTCCTTCTCGGCGCCCCCAATCCCATCCCGGCCT...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp GCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCAGCTTGGCAAACACGCTCTaGGGTCCAGGCCGGGATGGG +
Preference number: 4 (lower is better)
Translates to: ARPARANGSGPSKGTSGSLANTL*GPGRDG
Trigger: CCCATCCCGGCCTGGACCCCAGAGCGTGTTTGCCAA...GCTGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp GGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCATTGGCAAACACGCTCTaGGGTCCAGGCCGGGATGGG +
Preference number: 4 (lower is better)
Translates to: GQGRPGPTAPGLAKAPLALANTL*GPGRDG
Trigger: CCCATCCCGGCCTGGACCCCAGAGCGTGTTTGCCAA...TGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCCCGAACTGGCCGAGATaGGATCTGAGGCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LELQGPFAQCGVQPGTGAPNWPR*DLRRGW
Trigger: CCAGCCCCGCCTCAGATCCCATCTCGGCCAGTTCGG...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGCAGGGGGTCTTCTGCTaGGCACTCCTGGGGGAATCC +
Preference number: 4 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRQGVFC*ALLGES
Trigger: GGATTCCCCCAGGAGTGCCCAGCAGAAGACCCCCTG...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTTGCCCACTGGGAGCCTaGTCCCAGCATAGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPCPLGA*SQHRGG
Trigger: GCCGCCCCTATGCTGGGACCAGGCTCCCAGTGGGCA...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGCCAGGGCTGCCCACTaGGAGCCTGGTCCCAGCATA +
Preference number: 4 (lower is better)
Translates to: LELQGPFAQCGVQPGTGAARAAH*EPGPSI
Trigger: TATGCTGGGACCAGGCTCCCAGTGGGCAGCCCTGGC...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGCCAGGCTTGCCGCTaGGGAGCTCCTGCTAATGGG +
Preference number: 4 (lower is better)
Translates to: LELQGPFAQCGVQPGTGAGQACR*GAPANG
Trigger: CCCATTAGCAGGAGCTCCCCAGCGGCAAGCCTGGCC...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCTCTGGCAGCCGAGGCTaGGCCAGGCTCAGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: LELQGPFAQCGVQPGTGASGSRG*ARLRLC
Trigger: ACACAGCCTGAGCCTGGCCCAGCCTCGGCTGCCAGA...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR TCA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCCCGGGTGACGATTCCTaGACCGCGGGGAAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: LELQGPFAQCGVQPGTGAPGDDS*TAGKEV
Trigger: GACTTCCTTCCCCGCGGTTCAGGAATCGTCACCCGG...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR TCA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGCCCCTGCGGATCACCTaGTTGGGGATGGCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRPLRIT*LGMALF
Trigger: GAAGAGAGCCATCCCCAATCAGGTGATCCGCAGGGG...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000359692.10
ENST00000408974.8
CDS-3UTR TCA 90 bp TGGGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCAGCCGACTCCTCCATaGGGCTGCTCTGGTCTGCCG +
Preference number: 4 (lower is better)
Translates to: WEPGPSIGAAEGPRPLKLQPTPP*GCSGLP
Trigger: CGGCAGACCAGAGCAGCCTCATGGAGGAGTCGGCTG...GAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR TCA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCCCCCCTCTGCCACCCTaGGACTCCATCCCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: LELQGPFAQCGVQPGTGAPPLPP*DSIPQS
Trigger: ACTTTGGGGGATGGAGTCTCAGGGTGGCAGAGGGGG...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
69% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR GCA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGTCTGCAGATGTGGCGTaGCCATGCGGTCGGCCATGT +
Preference number: 4 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRSADVA*PCGRPC
Trigger: ACATGGCCGACCGCATGGGCACGCCACATCTGCAGA...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR GCA 90 bp GGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCAGCTGGCTCTGTAGTTTaGTACGTAGGGCCGGCAGCG +
Preference number: 4 (lower is better)
Translates to: GQGRPGPTAPGLAKAPLAAGSVV*YVGPAA
Trigger: CGCTGCCGGCCCTACGTAGCAAACTACAGAGCCAGC...TGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR GCA 90 bp GCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCAGCGCTGGCTCTGTAGTTTaGTACGTAGGGCCGGCAGCG +
Preference number: 4 (lower is better)
Translates to: ARPARANGSGPSKGTSGSAGSVV*YVGPAA
Trigger: CGCTGCCGGCCCTACGTAGCAAACTACAGAGCCAGC...GCTGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR GCA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGGCTGGCTCTGTAGTTTaGTACGTAGGGCCGGCAGCG +
Preference number: 4 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRAGSVV*YVGPAA
Trigger: CGCTGCCGGCCCTACGTAGCAAACTACAGAGCCAGC...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR GCA 90 bp GGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCAAGCTGCGTGCTCCTCTaGTGGGCATTGGCAAACCCG +
Preference number: 4 (lower is better)
Translates to: GQGRPGPTAPGLAKAPLASCVLL*WALANP
Trigger: CGGGTTTGCCAATGCCCAGCAGAGGAGCACGCAGCT...TGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR GCA 90 bp GCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCAGCAGCTGCGTGCTCCTCTaGTGGGCATTGGCAAACCCG +
Preference number: 4 (lower is better)
Translates to: ARPARANGSGPSKGTSGSSCVLL*WALANP
Trigger: CGGGTTTGCCAATGCCCAGCAGAGGAGCACGCAGCT...GCTGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR GCA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGAGCTGCGTGCTCCTCTaGTGGGCATTGGCAAACCCG +
Preference number: 4 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRSCVLL*WALANP
Trigger: CGGGTTTGCCAATGCCCAGCAGAGGAGCACGCAGCT...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR GCA 90 bp AATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGAAGAGGCCAGGGCTaGCCACTGGGAGCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: NRARPARANGSGPSKGTSGRGQG*PLGAWS
Trigger: GGACCAGGCTCCCAGTGGGCAGCCCTGGCCTCTTCC...AGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTATT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR GCA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTGGCCCCTTTGCGCAGTaGGGTGTCCAGCCAGGCACA +
Preference number: 4 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPGPFAQ*GVQPGT
Trigger: TGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCC...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGCTGGTACTCGATGTCTaGAGGCTGGTCGCCCACAGG +
Preference number: 4 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRLVLDV*RLVAHR
Trigger: CCTGTGGGCGACCAGCCTCCAGACATCGAGTACCAG...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp GCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCAGCCTGTCCACGTCTTCCTaGGAGTCACAGGCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: ARPARANGSGPSKGTSGSLSTSS*ESQASS
Trigger: CGAGCTGGCCTGTGACTCCCAGGAAGACGTGGACAG...GCTGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp GGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCATGGCTGCTGGCGCTCTaGAGCCAGGTGTCATCGACA +
Preference number: 4 (lower is better)
Translates to: GQGRPGPTAPGLAKAPLAWLLAL*SQVSST
Trigger: TGTCGATGACACCTGGCTCCAGAGCGCCAGCAGCCA...TGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGTGGCTGCTGGCGCTCTaGAGCCAGGTGTCATCGACA +
Preference number: 4 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRWLLAL*SQVSST
Trigger: TGTCGATGACACCTGGCTCCAGAGCGCCAGCAGCCA...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTTGTGGAGTGGGGCTGTaGCTGCTGGCGCTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPCGVGL*LLALWS
Trigger: GCTCCAGAGCGCCAGCAGCCACAGCCCCACTCCACA...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTCCGAACTGGCCGAGATaGGATCTGAGGCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPPNWPR*DLRRGW
Trigger: CCAGCCCCGCCTCAGATCCCATCTCGGCCAGTTCGG...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTTCCTGGGGGAATCCCTaGGGGGATCCGAACTGGCCG +
Preference number: 4 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPSWGNP*GDPNWP
Trigger: CGGCCAGTTCGGATCCCCCCAGGGATTCCCCCAGGA...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp ATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGTCCTGGGGGAATCCCTaGGGGGATCCGAACTGGCCG +
Preference number: 4 (lower is better)
Translates to: IGQGRPGPTAPGLAKAPLSWGNP*GDPNWP
Trigger: CGGCCAGTTCGGATCCCCCCAGGGATTCCCCCAGGA...CAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCCAGGGGGTCTTCTGCTaGGCACTCCTGGGGGAATCC +
Preference number: 4 (lower is better)
Translates to: LELQGPFAQCGVQPGTGAQGVFC*ALLGES
Trigger: GGATTCCCCCAGGAGTGCCCAGCAGAAGACCCCCTG...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTCAGGGATGGCTCGGCTaGGCGGATAATGGTGGGCCG +
Preference number: 4 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPQGWLG*ADNGGP
Trigger: CGGCCCACCATTATCCGCCCAGCCGAGCCATCCCTG...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp TGGGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCGCCAGGGCTGCCCACTaGGAGCCTGGTCCCAGCATA +
Preference number: 4 (lower is better)
Translates to: WEPGPSIGAAEGPRPLKLARAAH*EPGPSI
Trigger: TATGCTGGGACCAGGCTCCCAGTGGGCAGCCCTGGC...GAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTCTCAGGCCTGCCAGCTaGGCACTACCGAGCCCACTG +
Preference number: 4 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPLRPAS*ALPSPL
Trigger: CAGTGGGCTCGGTAGTGCCCAGCTGGCAGGCCTGAG...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR TCA 90 bp GGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCATCTGGCCGATGGAGCTaGAGGCGTCCTGCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: GQGRPGPTAPGLAKAPLASGRWS*RRPAVC
Trigger: ACAAACTGCAGGACGCCTTCAGCTCCATCGGCCAGA...TGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR TCA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTCTTCCTTGGCCAGCTTaGGGGCGTCGGAGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPLPWPA*GRRSWP
Trigger: TGGCCAACTCCGACGCCCTCAAGCTGGCCAAGGAAG...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR TCA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGTCCAGAGTGTCCACCTaGTCTCCTGAGCCCTCGATC +
Preference number: 4 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRSRVST*SPEPSI
Trigger: GATCGAGGGCTCAGGAGATCAGGTGGACACTCTGGA...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR TCA 90 bp TGGGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCGTGGAAGATGCGATTaGTTCGGGCGCCCCCGGAGA +
Preference number: 4 (lower is better)
Translates to: WEPGPSIGAAEGPRPLKLRGRCD*FGRPRR
Trigger: TCTCCGGGGGCGCCCGAATCAATCGCATCTTCCACG...GAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR TCA 90 bp ATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGCCCCCTCTGCCACCCTaGGACTCCATCCCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: IGQGRPGPTAPGLAKAPLPPLPP*DSIPQS
Trigger: ACTTTGGGGGATGGAGTCTCAGGGTGGCAGAGGGGG...CAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR TCA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGGACCGTGGCCAGCTCTaGGACCACGAGATCAACACA +
Preference number: 4 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRDRGQL*DHEINT
Trigger: TGTGTTGATCTCGTGGTCTCAGAGCTGGCCACGGTC...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389253.9
ENST00000408974.8
CDS-3UTR GCA 90 bp GGGGATGTAGGCGCCCTTGGTGCCCGCACTTATAGAAGGCCTGCCCTACATGGGCTTCCATCCCGCGGTTaGCCATGGCGCCGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: GDVGALGARTYRRPALHGLPSRG*PWRRRP
Trigger: GGGCCGCCGGCGCCATGGGCAACCGCGGGATGGAAG...CCCATGTAGGGCAGGCCTTCTATAAGTGCGGGCACCAAGGGCGCCTACATCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR GCA 90 bp GGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCAGAGCTGAAGGCGTCCTaGAGTTTGTTGACCAGCGGG +
Preference number: 4 (lower is better)
Translates to: GQGRPGPTAPGLAKAPLAELKAS*SLLTSG
Trigger: CCCGCTGGTCAACAAACTGCAGGACGCCTTCAGCTC...TGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR GCA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTCGTCCCTGGCGTCGGTaGCCTCGTCCATCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPRPWRR*PRPSGQ
Trigger: TTGACCTGATGGACGAGGGCACCGACGCCAGGGACG...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR GCA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGCTCAGCTGCCAGTGCTaGACGGATGTCCTTCTTGCC +
Preference number: 4 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRLSCQC*TDVLLA
Trigger: GGCAAGAAGGACATCCGTGCAGCACTGGCAGCTGAG...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR GCA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGCTGGCTCTGTAGTTTaGTACGTAGGGCCGGCAGCG +
Preference number: 4 (lower is better)
Translates to: LELQGPFAQCGVQPGTGAAGSVV*YVGPAA
Trigger: CGCTGCCGGCCCTACGTAGCAAACTACAGAGCCAGC...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp TGGGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCTCCAGGTGGCAGCTCTaGCCGATGGAGCTGAAGGCG +
Preference number: 4 (lower is better)
Translates to: WEPGPSIGAAEGPRPLKLSRWQL*PMELKA
Trigger: CGCCTTCAGCTCCATCGGCCAGAGCTGCCACCTGGA...GAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCCTGGTACTCGATGTCTaGAGGCTGGTCGCCCACAGG +
Preference number: 4 (lower is better)
Translates to: LELQGPFAQCGVQPGTGALVLDV*RLVAHR
Trigger: CCTGTGGGCGACCAGCCTCCAGACATCGAGTACCAG...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTTCTCCAAGACGTCCCTaGCGTCGGTGCCCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPSPRRP*RRCPRP
Trigger: TGGACGAGGGCACCGACGCCAGGGACGTCTTGGAGA...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp TGGGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCGTCTTCTGCAGATGTaGCGTGCCCATGCGGTCGGC +
Preference number: 4 (lower is better)
Translates to: WEPGPSIGAAEGPRPLKLRLLQM*RAHAVG
Trigger: GCCGACCGCATGGGCACGCCACATCTGCAGAAGACG...GAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTCGTCTTCTGCAGATGTaGCGTGCCCATGCGGTCGGC +
Preference number: 4 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPRLLQM*RAHAVG
Trigger: GCCGACCGCATGGGCACGCCACATCTGCAGAAGACG...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGTCTGCAGCAGGGCTTTaGTTTTGCGGGTGGGGTCGT +
Preference number: 4 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRSAAGL*FCGWGR
Trigger: ACGACCCCACCCGCAAAACCAAAGCCCTGCTGCAGA...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGTCCACCCCAAACTGCTaGACCATCTGCAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRSTPNC*TICSRA
Trigger: AGCCCTGCTGCAGATGGTCCAGCAGTTTGGGGTGGA...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGTGCGTGCTCCTCTGCTaGGCATTGGCAAACCCGATG +
Preference number: 4 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRCVLLC*ALANPM
Trigger: CATCGGGTTTGCCAATGCCCAGCAGAGGAGCACGCA...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCCTGTCCACGTCTTCCTaGGAGTCACAGGCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: LELQGPFAQCGVQPGTGALSTSS*ESQASS
Trigger: CGAGCTGGCCTGTGACTCCCAGGAAGACGTGGACAG...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTTTGGCAAACACGCTCTaGGGTCCAGGCCGGGATGGG +
Preference number: 4 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPLANTL*GPGRDG
Trigger: CCCATCCCGGCCTGGACCCCAGAGCGTGTTTGCCAA...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGATCTGAGGCGGGGCTaGGAAGAGGTCACTGTTGGC +
Preference number: 4 (lower is better)
Translates to: LELQGPFAQCGVQPGTGADLRRG*EEVTVG
Trigger: GCCAACAGTGACCTCTTCCCAGCCCCGCCTCAGATC...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp AATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCCAGGCTTGCCGCTaGGGAGCTCCTGCTAATGGG +
Preference number: 4 (lower is better)
Translates to: NRARPARANGSGPSKGTSGQACR*GAPANG
Trigger: CCCATTAGCAGGAGCTCCCCAGCGGCAAGCCTGGCC...AGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTATT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp AATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTCTCAGGCCTGCCAGCTaGGCACTACCGAGCCCACTG +
Preference number: 4 (lower is better)
Translates to: NRARPARANGSGPSKGTSLRPAS*ALPSPL
Trigger: CAGTGGGCTCGGTAGTGCCCAGCTGGCAGGCCTGAG...AGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTATT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp AATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTTCTGGCAGCCGAGGCTaGGCCAGGCTCAGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: NRARPARANGSGPSKGTSSGSRG*ARLRLC
Trigger: ACACAGCCTGAGCCTGGCCCAGCCTCGGCTGCCAGA...AGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTATT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR TCA 90 bp AATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTCTTCCTTGGCCAGCTTaGGGGCGTCGGAGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: NRARPARANGSGPSKGTSLPWPA*GRRSWP
Trigger: TGGCCAACTCCGACGCCCTCAAGCTGGCCAAGGAAG...AGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTATT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR TCA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGTCCACCTGATCTCCTaGGCCCTCGATCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: LELQGPFAQCGVQPGTGAVHLIS*ALDPLL
Trigger: GAGAAGAGGATCGAGGGCTCAGGAGATCAGGTGGAC...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR TCA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCTCCAGAGTGTCCACCTaGTCTCCTGAGCCCTCGATC +
Preference number: 4 (lower is better)
Translates to: LELQGPFAQCGVQPGTGASRVST*SPEPSI
Trigger: GATCGAGGGCTCAGGAGATCAGGTGGACACTCTGGA...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR TCA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGCCCGGATGTAAGTGGTaGCGATTCGCTCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRPGCKW*RFALSP
Trigger: AGGAGACAGAGCGAATCGTCACCACTTACATCCGGG...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR TCA 90 bp TGGGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCCCCTGCGGATCACCTaGTTGGGGATGGCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: WEPGPSIGAAEGPRPLKLPLRIT*LGMALF
Trigger: GAAGAGAGCCATCCCCAATCAGGTGATCCGCAGGGG...GAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000359692.10
ENST00000408974.8
CDS-3UTR TCA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGCCACATCACGGATCTTaGGGTTGTCCAGAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRPHHGS*GCPEAA
Trigger: TGCTGCCTCTGGACAACCTCAAGATCCGTGATGTGG...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR GCA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGACCCTGTCGGTCTCTaGTTCAATCTCCTGCCGGAC +
Preference number: 4 (lower is better)
Translates to: LELQGPFAQCGVQPGTGADPVGL*FNLLPD
Trigger: GTCCGGCAGGAGATTGAAGCAGAGACCGACAGGGTC...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR GCA 90 bp AATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTCGTCCCTGGCGTCGGTaGCCTCGTCCATCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: NRARPARANGSGPSKGTSRPWRR*PRPSGQ
Trigger: TTGACCTGATGGACGAGGGCACCGACGCCAGGGACG...AGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTATT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR GCA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCCTCAGCTGCCAGTGCTaGACGGATGTCCTTCTTGCC +
Preference number: 4 (lower is better)
Translates to: LELQGPFAQCGVQPGTGALSCQC*TDVLLA
Trigger: GGCAAGAAGGACATCCGTGCAGCACTGGCAGCTGAG...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR GCA 90 bp GGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCACCTCTCAGCTGCCAGTaGTGCACGGATGTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: GQGRPGPTAPGLAKAPLAPLSCQ*CTDVLL
Trigger: AAGAAGGACATCCGTGCAGCACTGGCAGCTGAGAGG...TGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR GCA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGCCTCTCAGCTGCCAGTaGTGCACGGATGTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRPLSCQ*CTDVLL
Trigger: AAGAAGGACATCCGTGCAGCACTGGCAGCTGAGAGG...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR GCA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGGAACTTCCTCTCAGCTaGCAGTGCTGCACGGATGTC +
Preference number: 4 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRELPLS*QCCTDV
Trigger: GACATCCGTGCAGCACTGGCAGCTGAGAGGAAGTTC...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR GCA 90 bp TGGGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCTCTGCAGATGTGGCGTaGCCATGCGGTCGGCCATGT +
Preference number: 4 (lower is better)
Translates to: WEPGPSIGAAEGPRPLKLSADVA*PCGRPC
Trigger: ACATGGCCGACCGCATGGGCACGCCACATCTGCAGA...GAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR GCA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTTCTGCAGATGTGGCGTaGCCATGCGGTCGGCCATGT +
Preference number: 4 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPSADVA*PCGRPC
Trigger: ACATGGCCGACCGCATGGGCACGCCACATCTGCAGA...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR GCA 90 bp TGGGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCAGCTGCGTGCTCCTCTaGTGGGCATTGGCAAACCCG +
Preference number: 4 (lower is better)
Translates to: WEPGPSIGAAEGPRPLKLSCVLL*WALANP
Trigger: CGGGTTTGCCAATGCCCAGCAGAGGAGCACGCAGCT...GAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTCTGGTACTCGATGTCTaGAGGCTGGTCGCCCACAGG +
Preference number: 4 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPLVLDV*RLVAHR
Trigger: CCTGTGGGCGACCAGCCTCCAGACATCGAGTACCAG...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp AATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTTCTCCAAGACGTCCCTaGCGTCGGTGCCCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: NRARPARANGSGPSKGTSSPRRP*RRCPRP
Trigger: TGGACGAGGGCACCGACGCCAGGGACGTCTTGGAGA...AGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTATT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCTCTGCAGCAGGGCTTTaGTTTTGCGGGTGGGGTCGT +
Preference number: 4 (lower is better)
Translates to: LELQGPFAQCGVQPGTGASAAGL*FCGWGR
Trigger: ACGACCCCACCCGCAAAACCAAAGCCCTGCTGCAGA...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp TGGGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTGTCCACGTCTTCCTaGGAGTCACAGGCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: WEPGPSIGAAEGPRPLKLLSTSS*ESQASS
Trigger: CGAGCTGGCCTGTGACTCCCAGGAAGACGTGGACAG...GAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCCCAGTTGGGGGTCCATaGAGAAGGTGTTCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LELQGPFAQCGVQPGTGAPVGGP*RRCSPG
Trigger: CCCAGGAGAACACCTTCTCCATGGACCCCCAACTGG...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTTGGCTGCTGGCGCTCTaGAGCCAGGTGTCATCGACA +
Preference number: 4 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPWLLAL*SQVSST
Trigger: TGTCGATGACACCTGGCTCCAGAGCGCCAGCAGCCA...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp GGGGATGTAGGCGCCCTTGGTGCCCGCACTTATAGAAGGCCTGCCCTACATGGGGTCGGCGCTGTGGAGTaGGGCTGTGGCTGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: GDVGALGARTYRRPALHGVGAVE*GCGCWR
Trigger: GCGCCAGCAGCCACAGCCCCACTCCACAGCGCCGAC...CCCATGTAGGGCAGGCCTTCTATAAGTGCGGGCACCAAGGGCGCCTACATCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp TGGGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCGATCTGAGGCGGGGCTaGGAAGAGGTCACTGTTGGC +
Preference number: 4 (lower is better)
Translates to: WEPGPSIGAAEGPRPLKLDLRRG*EEVTVG
Trigger: GCCAACAGTGACCTCTTCCCAGCCCCGCCTCAGATC...GAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp AATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTCAGGGGGTCTTCTGCTaGGCACTCCTGGGGGAATCC +
Preference number: 4 (lower is better)
Translates to: NRARPARANGSGPSKGTSQGVFC*ALLGES
Trigger: GGATTCCCCCAGGAGTGCCCAGCAGAAGACCCCCTG...AGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTATT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCCTAGTCGAGCAGGGATaGCTCGGCTGGGCGGATAAT +
Preference number: 4 (lower is better)
Translates to: LELQGPFAQCGVQPGTGALVEQG*LGWADN
Trigger: ATTATCCGCCCAGCCGAGCCATCCCTGCTCGACTAG...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp GGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCAAAGGCCTGCCCTACATaGGCTTTCCCAGCCCAAGAA +
Preference number: 4 (lower is better)
Translates to: GQGRPGPTAPGLAKAPLAKACPT*AFPAQE
Trigger: TTCTTGGGCTGGGAAAGCCCATGTAGGGCAGGCCTT...TGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGCAGGCTCAGGCTGTGTaGTTAATATGGCCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRQAQAV*LIWPGR
Trigger: CCTTCCCGGCCATATTAACCACACAGCCTGAGCCTG...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp GGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCACAGGCTCAGGCTGTGTaGTTAATATGGCCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: GQGRPGPTAPGLAKAPLAQAQAV*LIWPGR
Trigger: CCTTCCCGGCCATATTAACCACACAGCCTGAGCCTG...TGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR TCA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTTCTGGCCGATGGAGCTaGAGGCGTCCTGCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPSGRWS*RRPAVC
Trigger: ACAAACTGCAGGACGCCTTCAGCTCCATCGGCCAGA...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR TCA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCAGTAGACTCGAAGGTTaGTGGGCACTGGGGAGATGC +
Preference number: 4 (lower is better)
Translates to: LELQGPFAQCGVQPGTGASRLEG*WALGRC
Trigger: GCATCTCCCCAGTGCCCATCAACCTTCGAGTCTACT...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR TCA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTGTCCACCTGATCTCCTaGGCCCTCGATCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPVHLIS*ALDPLL
Trigger: GAGAAGAGGATCGAGGGCTCAGGAGATCAGGTGGAC...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR TCA 90 bp ATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGTCCAGAGTGTCCACCTaGTCTCCTGAGCCCTCGATC +
Preference number: 4 (lower is better)
Translates to: IGQGRPGPTAPGLAKAPLSRVST*SPEPSI
Trigger: GATCGAGGGCTCAGGAGATCAGGTGGACACTCTGGA...CAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR TCA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCCCCGGATGTAAGTGGTaGCGATTCGCTCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: LELQGPFAQCGVQPGTGAPGCKW*RFALSP
Trigger: AGGAGACAGAGCGAATCGTCACCACTTACATCCGGG...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR TCA 90 bp GCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCAGCCTGCTAATGGGAAGTTaGTATACCCCTGCACCCCAG +
Preference number: 4 (lower is better)
Translates to: ARPARANGSGPSKGTSGSLLMGS*YTPAPQ
Trigger: CTGGGGTGCAGGGGTATATCAACTTCCCATTAGCAG...GCTGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR GCA 90 bp ATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGACCCTGTCGGTCTCTaGTTCAATCTCCTGCCGGAC +
Preference number: 4 (lower is better)
Translates to: IGQGRPGPTAPGLAKAPLDPVGL*FNLLPD
Trigger: GTCCGGCAGGAGATTGAAGCAGAGACCGACAGGGTC...CAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR GCA 90 bp ATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGCTCAGCTGCCAGTGCTaGACGGATGTCCTTCTTGCC +
Preference number: 4 (lower is better)
Translates to: IGQGRPGPTAPGLAKAPLLSCQC*TDVLLA
Trigger: GGCAAGAAGGACATCCGTGCAGCACTGGCAGCTGAG...CAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR GCA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGAACTTCCTCTCAGCTaGCAGTGCTGCACGGATGTC +
Preference number: 4 (lower is better)
Translates to: LELQGPFAQCGVQPGTGAELPLS*QCCTDV
Trigger: GACATCCGTGCAGCACTGGCAGCTGAGAGGAAGTTC...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR GCA 90 bp GGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCACACAATGGCCTCGAATaGCAAGTCCGGGGTGAAAAG +
Preference number: 4 (lower is better)
Translates to: GQGRPGPTAPGLAKAPLAHNGLE*QVRGEK
Trigger: CTTTTCACCCCGGACTTGGCATTCGAGGCCATTGTG...TGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355667.11
ENST00000359692.10
CDS-3UTR CCA 90 bp AATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTCTGGTACTCGATGTCTaGAGGCTGGTCGCCCACAGG +
Preference number: 4 (lower is better)
Translates to: NRARPARANGSGPSKGTSLVLDV*RLVAHR
Trigger: CCTGTGGGCGACCAGCCTCCAGACATCGAGTACCAG...AGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTATT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp ATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGATGGTCCGTAGGCCTTaGGGATCGACTTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: IGQGRPGPTAPGLAKAPLMVRRP*GSTSLA
Trigger: GGCCAAGGAAGTCGATCCCCAAGGCCTACGGACCAT...CAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTATGGTCCGTAGGCCTTaGGGATCGACTTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPMVRRP*GSTSLA
Trigger: GGCCAAGGAAGTCGATCCCCAAGGCCTACGGACCAT...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp GGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCATCCAGGGACAGCAGCTaGCTCTGTAGTTTGCTACGT +
Preference number: 4 (lower is better)
Translates to: GQGRPGPTAPGLAKAPLASRDSS*LCSLLR
Trigger: ACGTAGCAAACTACAGAGCCAGCTGCTGTCCCTGGA...TGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTCTTTGGTTTTGCGGGTaGGGTCGTCGGGCCGAAAGT +
Preference number: 4 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPLWFCG*GRRAES
Trigger: ACTTTCGGCCCGACGACCCCACCCGCAAAACCAAAG...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp ATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGCTTTGGTTTTGCGGGTaGGGTCGTCGGGCCGAAAGT +
Preference number: 4 (lower is better)
Translates to: IGQGRPGPTAPGLAKAPLLWFCG*GRRAES
Trigger: ACTTTCGGCCCGACGACCCCACCCGCAAAACCAAAG...CAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp ATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGTCTGCAGCAGGGCTTTaGTTTTGCGGGTGGGGTCGT +
Preference number: 4 (lower is better)
Translates to: IGQGRPGPTAPGLAKAPLSAAGL*FCGWGR
Trigger: ACGACCCCACCCGCAAAACCAAAGCCCTGCTGCAGA...CAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp ATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGTCCACCCCAAACTGCTaGACCATCTGCAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: IGQGRPGPTAPGLAKAPLSTPNC*TICSRA
Trigger: AGCCCTGCTGCAGATGGTCCAGCAGTTTGGGGTGGA...CAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTTCCACCCCAAACTGCTaGACCATCTGCAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPSTPNC*TICSRA
Trigger: AGCCCTGCTGCAGATGGTCCAGCAGTTTGGGGTGGA...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp TGGGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCCAGTTGGGGGTCCATaGAGAAGGTGTTCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: WEPGPSIGAAEGPRPLKLPVGGP*RRCSPG
Trigger: CCCAGGAGAACACCTTCTCCATGGACCCCCAACTGG...GAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGCCAGCAGCTCGTGGTaGATGAAGGCCTTCGTATTG +
Preference number: 4 (lower is better)
Translates to: LELQGPFAQCGVQPGTGAASSSW*MKAFVL
Trigger: CAATACGAAGGCCTTCATCCACCACGAGCTGCTGGC...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp GGGGATGTAGGCGCCCTTGGTGCCCGCACTTATAGAAGGCCTGCCCTACATGGGCACCGGTCGGCGCTGTaGAGTGGGGCTGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: GDVGALGARTYRRPALHGHRSAL*SGAVAA
Trigger: AGCAGCCACAGCCCCACTCCACAGCGCCGACCGGTG...CCCATGTAGGGCAGGCCTTCTATAAGTGCGGGCACCAAGGGCGCCTACATCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGAAGAGGTCACTGTTaGCAAACACGCTCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: LELQGPFAQCGVQPGTGAGRGHC*QTRSGV
Trigger: GACCCCAGAGCGTGTTTGCCAACAGTGACCTCTTCC...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTCTAGTCGAGCAGGGATaGCTCGGCTGGGCGGATAAT +
Preference number: 4 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPLVEQG*LGWADN
Trigger: ATTATCCGCCCAGCCGAGCCATCCCTGCTCGACTAG...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp GCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCAGCACCCCTCATTCAGGATaGTGTCAAGGGTTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: ARPARANGSGPSKGTSGSTPHSG*CQGFWS
Trigger: GGACCAGAACCCTTGACACCATCCTGAATGAGGGGT...GCTGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp GGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCAAAACTGAGCGAGGAGTaGGTGAGGTCTCCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: GQGRPGPTAPGLAKAPLAKLSEE*VRSPQR
Trigger: TCTCTGAGGAGACCTCACCCACTCCTCGCTCAGTTT...TGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGGGATCTCCCCCTGATTaGGGATGGCTCTCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRGSPPD*GWLSSC
Trigger: ACAAGAAGAGAGCCATCCCCAATCAGGGGGAGATCC...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000355667.11
ENST00000389253.9
CDS-3UTR CCA 90 bp GCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCAGCGGATCTCCCCCTGATTaGGGATGGCTCTCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: ARPARANGSGPSKGTSGSGSPPD*GWLSSC
Trigger: ACAAGAAGAGAGCCATCCCCAATCAGGGGGAGATCC...GCTGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355667.11
ENST00000389253.9
CDS-3UTR TCA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTAGTAGACTCGAAGGTTaGTGGGCACTGGGGAGATGC +
Preference number: 4 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPSRLEG*WALGRC
Trigger: GCATCTCCCCAGTGCCCATCAACCTTCGAGTCTACT...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR TCA 90 bp TGGGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCTACCCGGGAGGTCGATaGGGGTCAAGTTCAACACGT +
Preference number: 4 (lower is better)
Translates to: WEPGPSIGAAEGPRPLKLYPGGR*GSSSTR
Trigger: ACGTGTTGAACTTGACCCTCATCGACCTCCCGGGTA...GAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR TCA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTTACCCGGGAGGTCGATaGGGGTCAAGTTCAACACGT +
Preference number: 4 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPYPGGR*GSSSTR
Trigger: ACGTGTTGAACTTGACCCTCATCGACCTCCCGGGTA...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR TCA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGGCAGGATCATGTCCTTaGTCTGGTACTCGATGTCTG +
Preference number: 4 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRAGSCP*SGTRCL
Trigger: CAGACATCGAGTACCAGATCAAGGACATGATCCTGC...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR TCA 90 bp ATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGCCCGGATGTAAGTGGTaGCGATTCGCTCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: IGQGRPGPTAPGLAKAPLPGCKW*RFALSP
Trigger: AGGAGACAGAGCGAATCGTCACCACTTACATCCGGG...CAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR TCA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTCCCGGATGTAAGTGGTaGCGATTCGCTCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPPGCKW*RFALSP
Trigger: AGGAGACAGAGCGAATCGTCACCACTTACATCCGGG...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR TCA 90 bp TGGGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCCACATCACGGATCTTaGGGTTGTCCAGAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: WEPGPSIGAAEGPRPLKLPHHGS*GCPEAA
Trigger: TGCTGCCTCTGGACAACCTCAAGATCCGTGATGTGG...GAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR TCA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGATGATGGCCACGTATaGGTCCACCAGGTTGCGAAT +
Preference number: 4 (lower is better)
Translates to: LELQGPFAQCGVQPGTGADDGHV*VHQVAN
Trigger: ATTCGCAACCTGGTGGACTCATACGTGGCCATCATC...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR GCA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGTCCCGGCTGATGAACTaGAGGATCATGTCCTTGATC +
Preference number: 4 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRSRLMN*RIMSLI
Trigger: GATCAAGGACATGATCCTGCAGTTCATCAGCCGGGA...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR GCA 90 bp TGGGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCCTCTCAGCTGCCAGTaGTGCACGGATGTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: WEPGPSIGAAEGPRPLKLPLSCQ*CTDVLL
Trigger: AAGAAGGACATCCGTGCAGCACTGGCAGCTGAGAGG...GAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR GCA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTAAGTTGATATACCCCTaGACCCCAGCAAGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPKLIYP*TPARPG
Trigger: CCCAGGCCTTGCTGGGGTGCAGGGGTATATCAACTT...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp GGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCAAAGGTTGATGGGCACTaGGGAGATGCCTTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: GQGRPGPTAPGLAKAPLAKVDGH*GDAFVG
Trigger: ACCAACAAAGGCATCTCCCCAGTGCCCATCAACCTT...TGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGAAGGTTGATGGGCACTaGGGAGATGCCTTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRKVDGH*GDAFVG
Trigger: ACCAACAAAGGCATCTCCCCAGTGCCCATCAACCTT...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCTCCAGGGACAGCAGCTaGCTCTGTAGTTTGCTACGT +
Preference number: 4 (lower is better)
Translates to: LELQGPFAQCGVQPGTGASRDSS*LCSLLR
Trigger: ACGTAGCAAACTACAGAGCCAGCTGCTGTCCCTGGA...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGAATGGGAACCGCTCGTaGAAGATGCGATTGATTCGG +
Preference number: 4 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRNGNRS*KMRLIR
Trigger: CCGAATCAATCGCATCTTCCACGAGCGGTTCCCATT...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGATCAGCAGAAGAATCTaGTCCTTCGTTCTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRISRRI*SFVLPS
Trigger: GGAGGGGAGAACGAAGGACCAGATTCTTCTGCTGAT...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp AATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTTGCGTGCTCCTCTGCTaGGCATTGGCAAACCCGATG +
Preference number: 4 (lower is better)
Translates to: NRARPARANGSGPSKGTSCVLLC*ALANPM
Trigger: CATCGGGTTTGCCAATGCCCAGCAGAGGAGCACGCA...AGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTGCCAGCAGCTCGTGGTaGATGAAGGCCTTCGTATTG +
Preference number: 4 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPASSSW*MKAFVL
Trigger: CAATACGAAGGCCTTCATCCACCACGAGCTGCTGGC...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTTCCATGAGGCTGCTCTaGTCTGCCGAGGAGTATAGG +
Preference number: 4 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPSMRLL*SAEEYR
Trigger: CCTATACTCCTCGGCAGACCAGAGCAGCCTCATGGA...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp ATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGTCCATGAGGCTGCTCTaGTCTGCCGAGGAGTATAGG +
Preference number: 4 (lower is better)
Translates to: IGQGRPGPTAPGLAKAPLSMRLL*SAEEYR
Trigger: CCTATACTCCTCGGCAGACCAGAGCAGCCTCATGGA...CAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp TGGGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCAAGGCCTGCCCTACATaGGCTTTCCCAGCCCAAGAA +
Preference number: 4 (lower is better)
Translates to: WEPGPSIGAAEGPRPLKLKACPT*AFPAQE
Trigger: TTCTTGGGCTGGGAAAGCCCATGTAGGGCAGGCCTT...GAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp GGGGATGTAGGCGCCCTTGGTGCCCGCACTTATAGAAGGCCTGCCCTACATGGGGGCCAGGCTTGCCGCTaGGGAGCTCCTGCTAATGGG +
Preference number: 4 (lower is better)
Translates to: GDVGALGARTYRRPALHGGQACR*GAPANG
Trigger: CCCATTAGCAGGAGCTCCCCAGCGGCAAGCCTGGCC...CCCATGTAGGGCAGGCCTTCTATAAGTGCGGGCACCAAGGGCGCCTACATCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTCAGGCTCAGGCTGTGTaGTTAATATGGCCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPQAQAV*LIWPGR
Trigger: CCTTCCCGGCCATATTAACCACACAGCCTGAGCCTG...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCCCCCCTGATTGGGGATaGCTCTCTTCTTGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: LELQGPFAQCGVQPGTGAPPDWG*LSSCSA
Trigger: AGCTGAACAAGAAGAGAGCCATCCCCAATCAGGGGG...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
64% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000355667.11
ENST00000389253.9
CDS-3UTR TCA 90 bp ATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGATGATGGCCACGTATaGGTCCACCAGGTTGCGAAT +
Preference number: 4 (lower is better)
Translates to: IGQGRPGPTAPGLAKAPLDDGHV*VHQVAN
Trigger: ATTCGCAACCTGGTGGACTCATACGTGGCCATCATC...CAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR TCA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTGATGATGGCCACGTATaGGTCCACCAGGTTGCGAAT +
Preference number: 4 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPDDGHV*VHQVAN
Trigger: ATTCGCAACCTGGTGGACTCATACGTGGCCATCATC...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR GCA 90 bp TGGGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCTTTGAGAAGATGAGCTaGAGAATGAGAGGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: WEPGPSIGAAEGPRPLKLFEKMS*RMRGRR
Trigger: CCGGCGGCCTCTCATTCTGCAGCTCATCTTCTCAAA...GAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR GCA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCTCCCGGCTGATGAACTaGAGGATCATGTCCTTGATC +
Preference number: 4 (lower is better)
Translates to: LELQGPFAQCGVQPGTGASRLMN*RIMSLI
Trigger: GATCAAGGACATGATCCTGCAGTTCATCAGCCGGGA...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR GCA 90 bp GGGGATGTAGGCGCCCTTGGTGCCCGCACTTATAGAAGGCCTGCCCTACATGGGCGTCCCTGGCGTCGGTaGCCTCGTCCATCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: GDVGALGARTYRRPALHGRPWRR*PRPSGQ
Trigger: TTGACCTGATGGACGAGGGCACCGACGCCAGGGACG...CCCATGTAGGGCAGGCCTTCTATAAGTGCGGGCACCAAGGGCGCCTACATCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR GCA 90 bp TGGGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCAAATCCACCCCAAACTaGTGGACCATCTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: WEPGPSIGAAEGPRPLKLKSTPN*WTICSR
Trigger: CCTGCTGCAGATGGTCCAGCAGTTTGGGGTGGATTT...GAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR GCA 90 bp ATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGCACAATGGCCTCGAATaGCAAGTCCGGGGTGAAAAG +
Preference number: 4 (lower is better)
Translates to: IGQGRPGPTAPGLAKAPLHNGLE*QVRGEK
Trigger: CTTTTCACCCCGGACTTGGCATTCGAGGCCATTGTG...CAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355667.11
ENST00000359692.10
CDS-3UTR GCA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGTTCAGCTTGACGACCTaGTTTTTCACAATGGCCTCG +
Preference number: 4 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRFSLTT*FFTMAS
Trigger: CGAGGCCATTGTGAAAAAGCAGGTCGTCAAGCTGAA...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355667.11
ENST00000359692.10
CDS-3UTR GCA 90 bp TCCACTCCAGCAGCTGGGCACGTAGTGAGAGCTCACTGGGAGGAAGTGAGACAGCGCCGAGAAGGAGGCTaGTGCCCCCACGGGAACAGG +
Preference number: 4 (lower is better)
Translates to: STPAAGHVVRAHWEEVRQRREGG*CPHGNR
Trigger: CCTGTTCCCGTGGGGGCAGCAGCCTCCTTCTCGGCG...CTGTCTCACTTCCTCCCAGTGAGCTCTCACTACGTGCCCAGCTGCTGGAGTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589106.1
CDS-3UTR GCA 90 bp GGGGATGTAGGCGCCCTTGGTGCCCGCACTTATAGAAGGCCTGCCCTACATGGGTGGTCAGCCAGCCCCTaGGGATCACCAGGATCTCCC +
Preference number: 4 (lower is better)
Translates to: GDVGALGARTYRRPALHGWSASP*GSPGSP
Trigger: GGGAGATCCTGGTGATCCGCAGGGGCTGGCTGACCA...CCCATGTAGGGCAGGCCTTCTATAAGTGCGGGCACCAAGGGCGCCTACATCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355667.11
ENST00000389253.9
CDS-3UTR CCA 90 bp GGGGATGTAGGCGCCCTTGGTGCCCGCACTTATAGAAGGCCTGCCCTACATGGGTCCAGGTGGCAGCTCTaGCCGATGGAGCTGAAGGCG +
Preference number: 4 (lower is better)
Translates to: GDVGALGARTYRRPALHGSRWQL*PMELKA
Trigger: CGCCTTCAGCTCCATCGGCCAGAGCTGCCACCTGGA...CCCATGTAGGGCAGGCCTTCTATAAGTGCGGGCACCAAGGGCGCCTACATCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCAAGGTTGATGGGCACTaGGGAGATGCCTTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: LELQGPFAQCGVQPGTGAKVDGH*GDAFVG
Trigger: ACCAACAAAGGCATCTCCCCAGTGCCCATCAACCTT...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp GGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCACAAGTTCAACACGTGTaGCGAGTAGACTCGAAGGTT +
Preference number: 4 (lower is better)
Translates to: GQGRPGPTAPGLAKAPLAQVQHV*RVDSKV
Trigger: AACCTTCGAGTCTACTCGCCACACGTGTTGAACTTG...TGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp GGGGATGTAGGCGCCCTTGGTGCCCGCACTTATAGAAGGCCTGCCCTACATGGGCGTCTTCTGCAGATGTaGCGTGCCCATGCGGTCGGC +
Preference number: 4 (lower is better)
Translates to: GDVGALGARTYRRPALHGRLLQM*RAHAVG
Trigger: GCCGACCGCATGGGCACGCCACATCTGCAGAAGACG...CCCATGTAGGGCAGGCCTTCTATAAGTGCGGGCACCAAGGGCGCCTACATCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTTCCAGGGACAGCAGCTaGCTCTGTAGTTTGCTACGT +
Preference number: 4 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPSRDSS*LCSLLR
Trigger: ACGTAGCAAACTACAGAGCCAGCTGCTGTCCCTGGA...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp ATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGTCCAGGGACAGCAGCTaGCTCTGTAGTTTGCTACGT +
Preference number: 4 (lower is better)
Translates to: IGQGRPGPTAPGLAKAPLSRDSS*LCSLLR
Trigger: ACGTAGCAAACTACAGAGCCAGCTGCTGTCCCTGGA...CAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCAATGGGAACCGCTCGTaGAAGATGCGATTGATTCGG +
Preference number: 4 (lower is better)
Translates to: LELQGPFAQCGVQPGTGANGNRS*KMRLIR
Trigger: CCGAATCAATCGCATCTTCCACGAGCGGTTCCCATT...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp CACTCCAGCAGCTGGGCACGTAGTGAGAGCTCACTGGGAGGAAGTGAGACAGGACACCGGTCGGCGCTGTaGAGTGGGGCTGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: HSSSWARSESSLGGSETGHRSAL*SGAVAA
Trigger: AGCAGCCACAGCCCCACTCCACAGCGCCGACCGGTG...TCCTGTCTCACTTCCTCCCAGTGAGCTCTCACTACGTGCCCAGCTGCTGGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589106.1
CDS-3UTR CCA 90 bp ACTCCAGCAGCTGGGCACGTAGTGAGAGCTCACTGGGAGGAAGTGAGACAGGAGGGGTCCAGGCCGGGATaGGATTGGGGGCGCCGAGAA +
Preference number: 4 (lower is better)
Translates to: TPAAGHVVRAHWEEVRQEGSRPG*DWGRRE
Trigger: TTCTCGGCGCCCCCAATCCCATCCCGGCCTGGACCC...CTCCTGTCTCACTTCCTCCCAGTGAGCTCTCACTACGTGCCCAGCTGCTGGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589106.1
CDS-3UTR CCA 90 bp AATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGAAGAGGTCACTGTTaGCAAACACGCTCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: NRARPARANGSGPSKGTSGRGHC*QTRSGV
Trigger: GACCCCAGAGCGTGTTTGCCAACAGTGACCTCTTCC...AGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp GGGGATGTAGGCGCCCTTGGTGCCCGCACTTATAGAAGGCCTGCCCTACATGGGCAGGGGGTCTTCTGCTaGGCACTCCTGGGGGAATCC +
Preference number: 4 (lower is better)
Translates to: GDVGALGARTYRRPALHGQGVFC*ALLGES
Trigger: GGATTCCCCCAGGAGTGCCCAGCAGAAGACCCCCTG...CCCATGTAGGGCAGGCCTTCTATAAGTGCGGGCACCAAGGGCGCCTACATCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTACCCCTCATTCAGGATaGTGTCAAGGGTTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPTPHSG*CQGFWS
Trigger: GGACCAGAACCCTTGACACCATCCTGAATGAGGGGT...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp AATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTAAGGCCTGCCCTACATaGGCTTTCCCAGCCCAAGAA +
Preference number: 4 (lower is better)
Translates to: NRARPARANGSGPSKGTSKACPT*AFPAQE
Trigger: TTCTTGGGCTGGGAAAGCCCATGTAGGGCAGGCCTT...AGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTATT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTCCCCCTGATTGGGGATaGCTCTCTTCTTGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPPPDWG*LSSCSA
Trigger: AGCTGAACAAGAAGAGAGCCATCCCCAATCAGGGGG...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000355667.11
ENST00000389253.9
CDS-3UTR TCA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCCCTCATGGTTCGTGTTaGTGTAGGACTGCTCAATGT +
Preference number: 4 (lower is better)
Translates to: LELQGPFAQCGVQPGTGAPHGSC*CRTAQC
Trigger: ACATTGAGCAGTCCTACATCAACACGAACCATGAGG...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR TCA 90 bp TGTGTGGTTAATATGGCCGGGAAGGACTATGTACACCTCAGGCCTGCCAGCTGGAGGGCCCCAGACCACTaGAGCTCCTGCGCCGCGGGT +
Preference number: 4 (lower is better)
Translates to: CVVNMAGKDYVHLRPASWRAPDH*SSCAAG
Trigger: ACCCGCGGCGCAGGAGCTTCAGTGGTCTGGGGCCCT...CCAGCTGGCAGGCCTGAGGTGTACATAGTCCTTCCCGGCCATATTAACCACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR TCA 90 bp ACTTACAGTGGTCAAACTGAGCGAGGAGTGGGTGAGGTCTCCTCAGAGAGAGGCAGGGCCCCAGACCACTaGAGCTCCTGCGCCGCGGGT +
Preference number: 4 (lower is better)
Translates to: TYSGQTERGVGEVSSERGRAPDH*SSCAAG
Trigger: ACCCGCGGCGCAGGAGCTTCAGTGGTCTGGGGCCCT...GCCTCTCTCTGAGGAGACCTCACCCACTCCTCGCTCAGTTTGACCACTGTAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR GCA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTTCCCGGCTGATGAACTaGAGGATCATGTCCTTGATC +
Preference number: 4 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPSRLMN*RIMSLI
Trigger: GATCAAGGACATGATCCTGCAGTTCATCAGCCGGGA...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR GCA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTAAGATGGCGAAGACGTaGTTGTTGGACATGAAGCCC +
Preference number: 4 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPKMAKT*LLDMKP
Trigger: GGGCTTCATGTCCAACAAGCACGTCTTCGCCATCTT...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR GCA 90 bp AGGCTGGGCCAGGCTCAGGCTGTGTGGTTAATATGGCCGGGAAGGACTATGTACCGCCGAGAAGGAGGCTaGTGCCCCCACGGGAACAGG +
Preference number: 4 (lower is better)
Translates to: RLGQAQAVWLIWPGRTMYRREGG*CPHGNR
Trigger: CCTGTTCCCGTGGGGGCAGCAGCCTCCTTCTCGGCG...GTACATAGTCCTTCCCGGCCATATTAACCACACAGCCTGAGCCTGGCCCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR GCA 90 bp AGGCTGGGCCAGGCTCAGGCTGTGTGGTTAATATGGCCGGGAAGGACTATGTACGCTCCAGGGCCCCTTTaGGCAGTGCGGTGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: RLGQAQAVWLIWPGRTMYAPGPL*AVRCPA
Trigger: GGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGC...GTACATAGTCCTTCCCGGCCATATTAACCACACAGCCTGAGCCTGGCCCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR GCA 90 bp GGGGATGTAGGCGCCCTTGGTGCCCGCACTTATAGAAGGCCTGCCCTACATGGGTGTACACCTCAGGCCTaGCAGCTGGGCACTACCGAG +
Preference number: 4 (lower is better)
Translates to: GDVGALGARTYRRPALHGCTPQA*QLGTTE
Trigger: CTCGGTAGTGCCCAGCTGGCAGGCCTGAGGTGTACA...CCCATGTAGGGCAGGCCTTCTATAAGTGCGGGCACCAAGGGCGCCTACATCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTAAGGTTGATGGGCACTaGGGAGATGCCTTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPKVDGH*GDAFVG
Trigger: ACCAACAAAGGCATCTCCCCAGTGCCCATCAACCTT...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCCAAGTTCAACACGTGTaGCGAGTAGACTCGAAGGTT +
Preference number: 4 (lower is better)
Translates to: LELQGPFAQCGVQPGTGAQVQHV*RVDSKV
Trigger: AACCTTCGAGTCTACTCGCCACACGTGTTGAACTTG...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCATCATGTCCTTGATCTaGTACTCGATGTCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: LELQGPFAQCGVQPGTGAIMSLI*YSMSGG
Trigger: GCCTCCAGACATCGAGTACCAGATCAAGGACATGAT...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTATCAGCAGAAGAATCTaGTCCTTCGTTCTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPISRRI*SFVLPS
Trigger: GGAGGGGAGAACGAAGGACCAGATTCTTCTGCTGAT...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCTCACCTGATTGGGGATaGCTCTCTTCTTGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: LELQGPFAQCGVQPGTGASPDWG*LSSCSA
Trigger: AGCTGAACAAGAAGAGAGCCATCCCCAATCAGGTGA...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359692.10
ENST00000408974.8
CDS-3UTR CCA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTTGCGGATCACCTGATTaGGGATGGCTCTCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPCGSPD*GWLSSC
Trigger: ACAAGAAGAGAGCCATCCCCAATCAGGTGATCCGCA...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359692.10
ENST00000408974.8
CDS-3UTR CCA 90 bp TCCACTCCAGCAGCTGGGCACGTAGTGAGAGCTCACTGGGAGGAAGTGAGACAGTGTGGAGTGGGGCTGTaGCTGCTGGCGCTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: STPAAGHVVRAHWEEVRQCGVGL*LLALWS
Trigger: GCTCCAGAGCGCCAGCAGCCACAGCCCCACTCCACA...CTGTCTCACTTCCTCCCAGTGAGCTCTCACTACGTGCCCAGCTGCTGGAGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589106.1
CDS-3UTR CCA 90 bp TTTCCTCGCAAGCCAAATAGGGATGAGGACGATTCCTCCACTCCAGCAGCTGGGGTCGGCGCTGTGGAGTaGGGCTGTGGCTGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: FPRKPNRDEDDSSTPAAGVGAVE*GCGCWR
Trigger: GCGCCAGCAGCCACAGCCCCACTCCACAGCGCCGAC...CCCAGCTGCTGGAGTGGAGGAATCGTCCTCATCCCTATTTGGCTTGCGAGGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589106.1
CDS-3UTR CCA 90 bp AGGCTGGGCCAGGCTCAGGCTGTGTGGTTAATATGGCCGGGAAGGACTATGTACAGGCCGGGATGGGATTaGGGGCGCCGAGAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: RLGQAQAVWLIWPGRTMYRPGWD*GRREGG
Trigger: GCCTCCTTCTCGGCGCCCCCAATCCCATCCCGGCCT...GTACATAGTCCTTCCCGGCCATATTAACCACACAGCCTGAGCCTGGCCCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp GGGGATGTAGGCGCCCTTGGTGCCCGCACTTATAGAAGGCCTGCCCTACATGGGGATCTGAGGCGGGGCTaGGAAGAGGTCACTGTTGGC +
Preference number: 4 (lower is better)
Translates to: GDVGALGARTYRRPALHGDLRRG*EEVTVG
Trigger: GCCAACAGTGACCTCTTCCCAGCCCCGCCTCAGATC...CCCATGTAGGGCAGGCCTTCTATAAGTGCGGGCACCAAGGGCGCCTACATCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp CTCCACTCCAGCAGCTGGGCACGTAGTGAGAGCTCACTGGGAGGAAGTGAGACACCGAACTGGCCGAGATaGGATCTGAGGCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LHSSSWARSESSLGGSETPNWPR*DLRRGW
Trigger: CCAGCCCCGCCTCAGATCCCATCTCGGCCAGTTCGG...TGTCTCACTTCCTCCCAGTGAGCTCTCACTACGTGCCCAGCTGCTGGAGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589106.1
CDS-3UTR CCA 90 bp AGGCTGGGCCAGGCTCAGGCTGTGTGGTTAATATGGCCGGGAAGGACTATGTACTGCCCACTGGGAGCCTaGTCCCAGCATAGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: RLGQAQAVWLIWPGRTMYCPLGA*SQHRGG
Trigger: GCCGCCCCTATGCTGGGACCAGGCTCCCAGTGGGCA...GTACATAGTCCTTCCCGGCCATATTAACCACACAGCCTGAGCCTGGCCCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGCTGTGTGGTTAATATaGCCGGGAAGGACTATGTAC +
Preference number: 4 (lower is better)
Translates to: LELQGPFAQCGVQPGTGAAVWLI*PGRTMY
Trigger: GTACATAGTCCTTCCCGGCCATATTAACCACACAGC...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp AATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTAAACTGAGCGAGGAGTaGGTGAGGTCTCCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: NRARPARANGSGPSKGTSKLSEE*VRSPQR
Trigger: TCTCTGAGGAGACCTCACCCACTCCTCGCTCAGTTT...AGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp AGGGATGAGGACGATTCCTCCACTCCAGCAGCTGGGCACGTAGTGAGAGCTCACTGCAGGCAGTTGGGGTaGAGGGCAGGGGGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: RDEDDSSTPAAGHVVRAHCRQLG*RAGGWP
Trigger: AGGCCAACCCCCTGCCCTCCACCCCAACTGCCTGCA...GTGAGCTCTCACTACGTGCCCAGCTGCTGGAGTGGAGGAATCGTCCTCATCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589106.1
CDS-3UTR TCA 90 bp AATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGCAGGATCATGTCCTTaGTCTGGTACTCGATGTCTG +
Preference number: 4 (lower is better)
Translates to: NRARPARANGSGPSKGTSAGSCP*SGTRCL
Trigger: CAGACATCGAGTACCAGATCAAGGACATGATCCTGC...AGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR TCA 90 bp GGGGATGTAGGCGCCCTTGGTGCCCGCACTTATAGAAGGCCTGCCCTACATGGGGTCCACCTGATCTCCTaGGCCCTCGATCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: GDVGALGARTYRRPALHGVHLIS*ALDPLL
Trigger: GAGAAGAGGATCGAGGGCTCAGGAGATCAGGTGGAC...CCCATGTAGGGCAGGCCTTCTATAAGTGCGGGCACCAAGGGCGCCTACATCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR TCA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTCCTCATGGTTCGTGTTaGTGTAGGACTGCTCAATGT +
Preference number: 4 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPPHGSC*CRTAQC
Trigger: ACATTGAGCAGTCCTACATCAACACGAACCATGAGG...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR TCA 90 bp AGGCTGGGCCAGGCTCAGGCTGTGTGGTTAATATGGCCGGGAAGGACTATGTACCAGCCGACTCCTCCATaGGGCTGCTCTGGTCTGCCG +
Preference number: 4 (lower is better)
Translates to: RLGQAQAVWLIWPGRTMYQPTPP*GCSGLP
Trigger: CGGCAGACCAGAGCAGCCTCATGGAGGAGTCGGCTG...GTACATAGTCCTTCCCGGCCATATTAACCACACAGCCTGAGCCTGGCCCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR TCA 90 bp GGGGATGTAGGCGCCCTTGGTGCCCGCACTTATAGAAGGCCTGCCCTACATGGGACCAGGATCTCCCCCTaGTTGGGGATGGCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: GDVGALGARTYRRPALHGTRISP*LGMALF
Trigger: GAAGAGAGCCATCCCCAATCAGGGGGAGATCCTGGT...CCCATGTAGGGCAGGCCTTCTATAAGTGCGGGCACCAAGGGCGCCTACATCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355667.11
ENST00000389253.9
CDS-3UTR CCA 90 bp TGTGTGGTTAATATGGCCGGGAAGGACTATGTACACCTCAGGCCTGCCAGCTGGCGACCCTCAACGACCTaGCCCCGCGGCGTCTGTAGC +
Preference number: 4 (lower is better)
Translates to: CVVNMAGKDYVHLRPASWRPSTT*PRGVCS
Trigger: GCTACAGACGCCGCGGGGCCAGGTCGTTGAGGGTCG...CCAGCTGGCAGGCCTGAGGTGTACATAGTCCTTCCCGGCCATATTAACCACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTATCATGTCCTTGATCTaGTACTCGATGTCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPIMSLI*YSMSGG
Trigger: GCCTCCAGACATCGAGTACCAGATCAAGGACATGAT...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CCA 90 bp GGGGATGTAGGCGCCCTTGGTGCCCGCACTTATAGAAGGCCTGCCCTACATGGGATGGTCCGTAGGCCTTaGGGATCGACTTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: GDVGALGARTYRRPALHGMVRRP*GSTSLA
Trigger: GGCCAAGGAAGTCGATCCCCAAGGCCTACGGACCAT...CCCATGTAGGGCAGGCCTTCTATAAGTGCGGGCACCAAGGGCGCCTACATCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp AATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTAATGGGAACCGCTCGTaGAAGATGCGATTGATTCGG +
Preference number: 4 (lower is better)
Translates to: NRARPARANGSGPSKGTSNGNRS*KMRLIR
Trigger: CCGAATCAATCGCATCTTCCACGAGCGGTTCCCATT...AGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp GGGGATGTAGGCGCCCTTGGTGCCCGCACTTATAGAAGGCCTGCCCTACATGGGCCAGTTGGGGGTCCATaGAGAAGGTGTTCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GDVGALGARTYRRPALHGPVGGP*RRCSPG
Trigger: CCCAGGAGAACACCTTCTCCATGGACCCCCAACTGG...CCCATGTAGGGCAGGCCTTCTATAAGTGCGGGCACCAAGGGCGCCTACATCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp TGTGTGGTTAATATGGCCGGGAAGGACTATGTACACCTCAGGCCTGCCAGCTGGGGGTCCAGGCCGGGATaGGATTGGGGGCGCCGAGAA +
Preference number: 4 (lower is better)
Translates to: CVVNMAGKDYVHLRPASWGSRPG*DWGRRE
Trigger: TTCTCGGCGCCCCCAATCCCATCCCGGCCTGGACCC...CCAGCTGGCAGGCCTGAGGTGTACATAGTCCTTCCCGGCCATATTAACCACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp CGATTCCTCCACTCCAGCAGCTGGGCACGTAGTGAGAGCTCACTGGGAGGAAGTTTGGCAAACACGCTCTaGGGTCCAGGCCGGGATGGG +
Preference number: 4 (lower is better)
Translates to: RFLHSSSWARSESSLGGSLANTL*GPGRDG
Trigger: CCCATCCCGGCCTGGACCCCAGAGCGTGTTTGCCAA...ACTTCCTCCCAGTGAGCTCTCACTACGTGCCCAGCTGCTGGAGTGGAGGAATCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589106.1
CDS-3UTR CCA 90 bp AGGCTGGGCCAGGCTCAGGCTGTGTGGTTAATATGGCCGGGAAGGACTATGTACCCGAACTGGCCGAGATaGGATCTGAGGCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RLGQAQAVWLIWPGRTMYPNWPR*DLRRGW
Trigger: CCAGCCCCGCCTCAGATCCCATCTCGGCCAGTTCGG...GTACATAGTCCTTCCCGGCCATATTAACCACACAGCCTGAGCCTGGCCCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp TTCCTCGCAAGCCAAATAGGGATGAGGACGATTCCTCCACTCCAGCAGCTGGGCTCCTGGGGGAATCCCTaGGGGGATCCGAACTGGCCG +
Preference number: 4 (lower is better)
Translates to: FLASQIGMRTIPPLQQLGSWGNP*GDPNWP
Trigger: CGGCCAGTTCGGATCCCCCCAGGGATTCCCCCAGGA...GCCCAGCTGCTGGAGTGGAGGAATCGTCCTCATCCCTATTTGGCTTGCGAGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000589106.1
CDS-3UTR CCA 90 bp TGTGTGGTTAATATGGCCGGGAAGGACTATGTACACCTCAGGCCTGCCAGCTGGTGCCCACTGGGAGCCTaGTCCCAGCATAGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: CVVNMAGKDYVHLRPASWCPLGA*SQHRGG
Trigger: GCCGCCCCTATGCTGGGACCAGGCTCCCAGTGGGCA...CCAGCTGGCAGGCCTGAGGTGTACATAGTCCTTCCCGGCCATATTAACCACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp ACTTACAGTGGTCAAACTGAGCGAGGAGTGGGTGAGGTCTCCTCAGAGAGAGGCCACTACCGAGCCCACTaGGCCAGGCTTGCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: TYSGQTERGVGEVSSERGHYRAH*ARLAAG
Trigger: CCCAGCGGCAAGCCTGGCCCAGTGGGCTCGGTAGTG...GCCTCTCTCTGAGGAGACCTCACCCACTCCTCGCTCAGTTTGACCACTGTAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp GACGATTCCTCCACTCCAGCAGCTGGGCACGTAGTGAGAGCTCACTGGGAGGAAGGGGTTGGCCTTACCTaGGCACTCCTGGGGGAATCC +
Preference number: 4 (lower is better)
Translates to: DDSSTPAAGHVVRAHWEEGVGLT*ALLGES
Trigger: GGATTCCCCCAGGAGTGCCCAGGTAAGGCCAACCCC...TTCCTCCCAGTGAGCTCTCACTACGTGCCCAGCTGCTGGAGTGGAGGAATCGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589106.1
CDS-3UTR CCA 90 bp CACTCCAGCAGCTGGGCACGTAGTGAGAGCTCACTGGGAGGAAGTGAGACAGGATGGAGGGCAGGGGGTTaGCCTTACCTGGGCACTCCT +
Preference number: 4 (lower is better)
Translates to: HSSSWARSESSLGGSETGWRAGG*PYLGTP
Trigger: AGGAGTGCCCAGGTAAGGCCAACCCCCTGCCCTCCA...TCCTGTCTCACTTCCTCCCAGTGAGCTCTCACTACGTGCCCAGCTGCTGGAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589106.1
CDS-3UTR TCA 90 bp AGGCTGGGCCAGGCTCAGGCTGTGTGGTTAATATGGCCGGGAAGGACTATGTACCGTGGAAGATGCGATTaGTTCGGGCGCCCCCGGAGA +
Preference number: 4 (lower is better)
Translates to: RLGQAQAVWLIWPGRTMYRGRCD*FGRPRR
Trigger: TCTCCGGGGGCGCCCGAATCAATCGCATCTTCCACG...GTACATAGTCCTTCCCGGCCATATTAACCACACAGCCTGAGCCTGGCCCAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR TCA 90 bp AATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTCCTCATGGTTCGTGTTaGTGTAGGACTGCTCAATGT +
Preference number: 4 (lower is better)
Translates to: NRARPARANGSGPSKGTSPHGSC*CRTAQC
Trigger: ACATTGAGCAGTCCTACATCAACACGAACCATGAGG...AGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR TCA 90 bp GATTCCTCCACTCCAGCAGCTGGGCACGTAGTGAGAGCTCACTGGGAGGAAGTGCTCACTGGGAGGAAGTaGGACAGGAGGAGAGACCCC +
Preference number: 4 (lower is better)
Translates to: DSSTPAAGHVVRAHWEEVLTGRK*DRRRDP
Trigger: GGGGTCTCTCCTCCTGTCTCACTTCCTCCCAGTGAG...CACTTCCTCCCAGTGAGCTCTCACTACGTGCCCAGCTGCTGGAGTGGAGGAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589106.1
CDS-3UTR GCA 90 bp AGGCTGGGCCAGGCTCAGGCTGTGTGGTTAATATGGCCGGGAAGGACTATGTACCCCACTACAGCGATCTaGGGCAGGTCCAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RLGQAQAVWLIWPGRTMYPTTAI*GRSRWQ
Trigger: CTGCCACCTGGACCTGCCGCAGATCGCTGTAGTGGG...GTACATAGTCCTTCCCGGCCATATTAACCACACAGCCTGAGCCTGGCCCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR GCA 90 bp GGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCATTTTTGGACTTGCAGTaGAAAAACTCGGCATGTTCT +
Preference number: 4 (lower is better)
Translates to: GQGRPGPTAPGLAKAPLAFLDLQ*KNSACS
Trigger: AGAACATGCCGAGTTTTTGCACTGCAAGTCCAAAAA...TGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp AGGCTGGGCCAGGCTCAGGCTGTGTGGTTAATATGGCCGGGAAGGACTATGTACCGTCTTCTGCAGATGTaGCGTGCCCATGCGGTCGGC +
Preference number: 4 (lower is better)
Translates to: RLGQAQAVWLIWPGRTMYRLLQM*RAHAVG
Trigger: GCCGACCGCATGGGCACGCCACATCTGCAGAAGACG...GTACATAGTCCTTCCCGGCCATATTAACCACACAGCCTGAGCCTGGCCCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp GGGGATGTAGGCGCCCTTGGTGCCCGCACTTATAGAAGGCCTGCCCTACATGGGGCCAGCAGCTCGTGGTaGATGAAGGCCTTCGTATTG +
Preference number: 4 (lower is better)
Translates to: GDVGALGARTYRRPALHGASSSW*MKAFVL
Trigger: CAATACGAAGGCCTTCATCCACCACGAGCTGCTGGC...CCCATGTAGGGCAGGCCTTCTATAAGTGCGGGCACCAAGGGCGCCTACATCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp CTGTTTCCTCGCAAGCCAAATAGGGATGAGGACGATTCCTCCACTCCAGCAGCTAGGCCGGGATGGGATTaGGGGCGCCGAGAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: LFPRKPNRDEDDSSTPAARPGWD*GRREGG
Trigger: GCCTCCTTCTCGGCGCCCCCAATCCCATCCCGGCCT...AGCTGCTGGAGTGGAGGAATCGTCCTCATCCCTATTTGGCTTGCGAGGAAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589106.1
CDS-3UTR CCA 90 bp AGGGATGAGGACGATTCCTCCACTCCAGCAGCTGGGCACGTAGTGAGAGCTCACGATCTGAGGCGGGGCTaGGAAGAGGTCACTGTTGGC +
Preference number: 4 (lower is better)
Translates to: RDEDDSSTPAAGHVVRAHDLRRG*EEVTVG
Trigger: GCCAACAGTGACCTCTTCCCAGCCCCGCCTCAGATC...GTGAGCTCTCACTACGTGCCCAGCTGCTGGAGTGGAGGAATCGTCCTCATCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589106.1
CDS-3UTR CCA 90 bp ACTTACAGTGGTCAAACTGAGCGAGGAGTGGGTGAGGTCTCCTCAGAGAGAGGCCAGGGATGGCTCGGCTaGGCGGATAATGGTGGGCCG +
Preference number: 4 (lower is better)
Translates to: TYSGQTERGVGEVSSERGQGWLG*ADNGGP
Trigger: CGGCCCACCATTATCCGCCCAGCCGAGCCATCCCTG...GCCTCTCTCTGAGGAGACCTCACCCACTCCTCGCTCAGTTTGACCACTGTAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp TGTGTGGTTAATATGGCCGGGAAGGACTATGTACACCTCAGGCCTGCCAGCTGGCACCCCAGCAAGGCCTaGGGATGTAGGCGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: CVVNMAGKDYVHLRPASWHPSKA*GCRRPW
Trigger: CCAAGGGCGCCTACATCCCCAGGCCTTGCTGGGGTG...CCAGCTGGCAGGCCTGAGGTGTACATAGTCCTTCCCGGCCATATTAACCACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR TCA 90 bp TGGGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCGGCATGTTCTGTTTTTaGGAAGATGAGCTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: WEPGPSIGAAEGPRPLKLGMFCF*EDELQN
Trigger: ATTCTGCAGCTCATCTTCTCAAAAACAGAACATGCC...GAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR GCA 90 bp TGTGTGGTTAATATGGCCGGGAAGGACTATGTACACCTCAGGCCTGCCAGCTGGCCCACTACAGCGATCTaGGGCAGGTCCAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: CVVNMAGKDYVHLRPASWPTTAI*GRSRWQ
Trigger: CTGCCACCTGGACCTGCCGCAGATCGCTGTAGTGGG...CCAGCTGGCAGGCCTGAGGTGTACATAGTCCTTCCCGGCCATATTAACCACACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp TTCCTCGCAAGCCAAATAGGGATGAGGACGATTCCTCCACTCCAGCAGCTGGGCTGGCTGCTGGCGCTCTaGAGCCAGGTGTCATCGACA +
Preference number: 4 (lower is better)
Translates to: FLASQIGMRTIPPLQQLGWLLAL*SQVSST
Trigger: TGTCGATGACACCTGGCTCCAGAGCGCCAGCAGCCA...GCCCAGCTGCTGGAGTGGAGGAATCGTCCTCATCCCTATTTGGCTTGCGAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589106.1
CDS-3UTR CCA 90 bp CACTCCAGCAGCTGGGCACGTAGTGAGAGCTCACTGGGAGGAAGTGAGACAGGACTCCACTCCAGCAGCTaGGCACGTAGTGAGAGCTCA +
Preference number: 4 (lower is better)
Translates to: HSSSWARSESSLGGSETGLHSSS*ARSESS
Trigger: TGAGCTCTCACTACGTGCCCAGCTGCTGGAGTGGAG...TCCTGTCTCACTTCCTCCCAGTGAGCTCTCACTACGTGCCCAGCTGCTGGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589106.1
CDS-3UTR TCA 90 bp AGGCTGGGCCAGGCTCAGGCTGTGTGGTTAATATGGCCGGGAAGGACTATGTACTCTGGCCGATGGAGCTaGAGGCGTCCTGCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: RLGQAQAVWLIWPGRTMYSGRWS*RRPAVC
Trigger: ACAAACTGCAGGACGCCTTCAGCTCCATCGGCCAGA...GTACATAGTCCTTCCCGGCCATATTAACCACACAGCCTGAGCCTGGCCCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR GCA 90 bp ATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGTTTTTGGACTTGCAGTaGAAAAACTCGGCATGTTCT +
Preference number: 4 (lower is better)
Translates to: IGQGRPGPTAPGLAKAPLFLDLQ*KNSACS
Trigger: AGAACATGCCGAGTTTTTGCACTGCAAGTCCAAAAA...CAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR GCA 90 bp TGGGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCTTTTTGGACTTGCAGTaGAAAAACTCGGCATGTTCT +
Preference number: 4 (lower is better)
Translates to: WEPGPSIGAAEGPRPLKLFLDLQ*KNSACS
Trigger: AGAACATGCCGAGTTTTTGCACTGCAAGTCCAAAAA...GAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR GCA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTAGCTTACTGGTACACTaGCTAACTGTATTGATTAGC +
Preference number: 4 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPSLLVH*LTVLIS
Trigger: GCTAATCAATACAGTTAGGCAGTGTACCAGTAAGCT...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355667.11
ENST00000359692.10
CDS-3UTR GCA 90 bp ACTTACAGTGGTCAAACTGAGCGAGGAGTGGGTGAGGTCTCCTCAGAGAGAGGCTGTACACCTCAGGCCTaGCAGCTGGGCACTACCGAG +
Preference number: 4 (lower is better)
Translates to: TYSGQTERGVGEVSSERGCTPQA*QLGTTE
Trigger: CTCGGTAGTGCCCAGCTGGCAGGCCTGAGGTGTACA...GCCTCTCTCTGAGGAGACCTCACCCACTCCTCGCTCAGTTTGACCACTGTAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp AGGCTGGGCCAGGCTCAGGCTGTGTGGTTAATATGGCCGGGAAGGACTATGTACCTTTGGTTTTGCGGGTaGGGTCGTCGGGCCGAAAGT +
Preference number: 4 (lower is better)
Translates to: RLGQAQAVWLIWPGRTMYLWFCG*GRRAES
Trigger: ACTTTCGGCCCGACGACCCCACCCGCAAAACCAAAG...GTACATAGTCCTTCCCGGCCATATTAACCACACAGCCTGAGCCTGGCCCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp AGGCTGGGCCAGGCTCAGGCTGTGTGGTTAATATGGCCGGGAAGGACTATGTACTCTGCAGCAGGGCTTTaGTTTTGCGGGTGGGGTCGT +
Preference number: 4 (lower is better)
Translates to: RLGQAQAVWLIWPGRTMYSAAGL*FCGWGR
Trigger: ACGACCCCACCCGCAAAACCAAAGCCCTGCTGCAGA...GTACATAGTCCTTCCCGGCCATATTAACCACACAGCCTGAGCCTGGCCCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp TGTGTGGTTAATATGGCCGGGAAGGACTATGTACACCTCAGGCCTGCCAGCTGGTGGCTGCTGGCGCTCTaGAGCCAGGTGTCATCGACA +
Preference number: 4 (lower is better)
Translates to: CVVNMAGKDYVHLRPASWWLLAL*SQVSST
Trigger: TGTCGATGACACCTGGCTCCAGAGCGCCAGCAGCCA...CCAGCTGGCAGGCCTGAGGTGTACATAGTCCTTCCCGGCCATATTAACCACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp CACTCCAGCAGCTGGGCACGTAGTGAGAGCTCACTGGGAGGAAGTGAGACAGGAGGAAGAGGTCACTGTTaGCAAACACGCTCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: HSSSWARSESSLGGSETGGRGHC*QTRSGV
Trigger: GACCCCAGAGCGTGTTTGCCAACAGTGACCTCTTCC...TCCTGTCTCACTTCCTCCCAGTGAGCTCTCACTACGTGCCCAGCTGCTGGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589106.1
CDS-3UTR CCA 90 bp ACTTACAGTGGTCAAACTGAGCGAGGAGTGGGTGAGGTCTCCTCAGAGAGAGGCGATCTGAGGCGGGGCTaGGAAGAGGTCACTGTTGGC +
Preference number: 4 (lower is better)
Translates to: TYSGQTERGVGEVSSERGDLRRG*EEVTVG
Trigger: GCCAACAGTGACCTCTTCCCAGCCCCGCCTCAGATC...GCCTCTCTCTGAGGAGACCTCACCCACTCCTCGCTCAGTTTGACCACTGTAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR TCA 90 bp AGGCTGGGCCAGGCTCAGGCTGTGTGGTTAATATGGCCGGGAAGGACTATGTACAGTAGACTCGAAGGTTaGTGGGCACTGGGGAGATGC +
Preference number: 4 (lower is better)
Translates to: RLGQAQAVWLIWPGRTMYSRLEG*WALGRC
Trigger: GCATCTCCCCAGTGCCCATCAACCTTCGAGTCTACT...GTACATAGTCCTTCCCGGCCATATTAACCACACAGCCTGAGCCTGGCCCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR TCA 90 bp ACTTACAGTGGTCAAACTGAGCGAGGAGTGGGTGAGGTCTCCTCAGAGAGAGGCGTCCACCTGATCTCCTaGGCCCTCGATCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: TYSGQTERGVGEVSSERGVHLIS*ALDPLL
Trigger: GAGAAGAGGATCGAGGGCTCAGGAGATCAGGTGGAC...GCCTCTCTCTGAGGAGACCTCACCCACTCCTCGCTCAGTTTGACCACTGTAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR TCA 90 bp ACTTACAGTGGTCAAACTGAGCGAGGAGTGGGTGAGGTCTCCTCAGAGAGAGGCGACCGTGGCCAGCTCTaGGACCACGAGATCAACACA +
Preference number: 4 (lower is better)
Translates to: TYSGQTERGVGEVSSERGDRGQL*DHEINT
Trigger: TGTGTTGATCTCGTGGTCTCAGAGCTGGCCACGGTC...GCCTCTCTCTGAGGAGACCTCACCCACTCCTCGCTCAGTTTGACCACTGTAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389253.9
CDS-3UTR GCA 90 bp TGTGTGGTTAATATGGCCGGGAAGGACTATGTACACCTCAGGCCTGCCAGCTGGCTCAGCTGCCAGTGCTaGACGGATGTCCTTCTTGCC +
Preference number: 4 (lower is better)
Translates to: CVVNMAGKDYVHLRPASWLSCQC*TDVLLA
Trigger: GGCAAGAAGGACATCCGTGCAGCACTGGCAGCTGAG...CCAGCTGGCAGGCCTGAGGTGTACATAGTCCTTCCCGGCCATATTAACCACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR GCA 90 bp AGGCTGGGCCAGGCTCAGGCTGTGTGGTTAATATGGCCGGGAAGGACTATGTACCCTCTCAGCTGCCAGTaGTGCACGGATGTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: RLGQAQAVWLIWPGRTMYPLSCQ*CTDVLL
Trigger: AAGAAGGACATCCGTGCAGCACTGGCAGCTGAGAGG...GTACATAGTCCTTCCCGGCCATATTAACCACACAGCCTGAGCCTGGCCCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR GCA 90 bp AATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTAGCTTACTGGTACACTaGCTAACTGTATTGATTAGC +
Preference number: 4 (lower is better)
Translates to: NRARPARANGSGPSKGTSSLLVH*LTVLIS
Trigger: GCTAATCAATACAGTTAGGCAGTGTACCAGTAAGCT...AGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355667.11
ENST00000359692.10
CDS-3UTR CCA 90 bp GGGGATGTAGGCGCCCTTGGTGCCCGCACTTATAGAAGGCCTGCCCTACATGGGCAAGTTCAACACGTGTaGCGAGTAGACTCGAAGGTT +
Preference number: 4 (lower is better)
Translates to: GDVGALGARTYRRPALHGQVQHV*RVDSKV
Trigger: AACCTTCGAGTCTACTCGCCACACGTGTTGAACTTG...CCCATGTAGGGCAGGCCTTCTATAAGTGCGGGCACCAAGGGCGCCTACATCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp TGTGTGGTTAATATGGCCGGGAAGGACTATGTACACCTCAGGCCTGCCAGCTGGTCCACCCCAAACTGCTaGACCATCTGCAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: CVVNMAGKDYVHLRPASWSTPNC*TICSRA
Trigger: AGCCCTGCTGCAGATGGTCCAGCAGTTTGGGGTGGA...CCAGCTGGCAGGCCTGAGGTGTACATAGTCCTTCCCGGCCATATTAACCACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp ACTTACAGTGGTCAAACTGAGCGAGGAGTGGGTGAGGTCTCCTCAGAGAGAGGCTGCGTGCTCCTCTGCTaGGCATTGGCAAACCCGATG +
Preference number: 4 (lower is better)
Translates to: TYSGQTERGVGEVSSERGCVLLC*ALANPM
Trigger: CATCGGGTTTGCCAATGCCCAGCAGAGGAGCACGCA...GCCTCTCTCTGAGGAGACCTCACCCACTCCTCGCTCAGTTTGACCACTGTAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp GGGGATGTAGGCGCCCTTGGTGCCCGCACTTATAGAAGGCCTGCCCTACATGGGTCACCTGATTGGGGATaGCTCTCTTCTTGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: GDVGALGARTYRRPALHGSPDWG*LSSCSA
Trigger: AGCTGAACAAGAAGAGAGCCATCCCCAATCAGGTGA...CCCATGTAGGGCAGGCCTTCTATAAGTGCGGGCACCAAGGGCGCCTACATCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359692.10
CDS-3UTR CCA 90 bp AGGCTGGGCCAGGCTCAGGCTGTGTGGTTAATATGGCCGGGAAGGACTATGTACGGAAGAGGTCACTGTTaGCAAACACGCTCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: RLGQAQAVWLIWPGRTMYGRGHC*QTRSGV
Trigger: GACCCCAGAGCGTGTTTGCCAACAGTGACCTCTTCC...GTACATAGTCCTTCCCGGCCATATTAACCACACAGCCTGAGCCTGGCCCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR TCA 90 bp TGTGTGGTTAATATGGCCGGGAAGGACTATGTACACCTCAGGCCTGCCAGCTGGTACCCGGGAGGTCGATaGGGGTCAAGTTCAACACGT +
Preference number: 4 (lower is better)
Translates to: CVVNMAGKDYVHLRPASWYPGGR*GSSSTR
Trigger: ACGTGTTGAACTTGACCCTCATCGACCTCCCGGGTA...CCAGCTGGCAGGCCTGAGGTGTACATAGTCCTTCCCGGCCATATTAACCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR TCA 90 bp TGTGTGGTTAATATGGCCGGGAAGGACTATGTACACCTCAGGCCTGCCAGCTGGCCACATCACGGATCTTaGGGTTGTCCAGAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: CVVNMAGKDYVHLRPASWPHHGS*GCPEAA
Trigger: TGCTGCCTCTGGACAACCTCAAGATCCGTGATGTGG...CCAGCTGGCAGGCCTGAGGTGTACATAGTCCTTCCCGGCCATATTAACCACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR TCA 90 bp AGGCTGGGCCAGGCTCAGGCTGTGTGGTTAATATGGCCGGGAAGGACTATGTACGATGATGGCCACGTATaGGTCCACCAGGTTGCGAAT +
Preference number: 4 (lower is better)
Translates to: RLGQAQAVWLIWPGRTMYDDGHV*VHQVAN
Trigger: ATTCGCAACCTGGTGGACTCATACGTGGCCATCATC...GTACATAGTCCTTCCCGGCCATATTAACCACACAGCCTGAGCCTGGCCCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR TCA 90 bp AGGCTGGGCCAGGCTCAGGCTGTGTGGTTAATATGGCCGGGAAGGACTATGTACCTGCTAATGGGAAGTTaGTATACCCCTGCACCCCAG +
Preference number: 4 (lower is better)
Translates to: RLGQAQAVWLIWPGRTMYLLMGS*YTPAPQ
Trigger: CTGGGGTGCAGGGGTATATCAACTTCCCATTAGCAG...GTACATAGTCCTTCCCGGCCATATTAACCACACAGCCTGAGCCTGGCCCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR GCA 90 bp ACTTACAGTGGTCAAACTGAGCGAGGAGTGGGTGAGGTCTCCTCAGAGAGAGGCGAACTTCCTCTCAGCTaGCAGTGCTGCACGGATGTC +
Preference number: 4 (lower is better)
Translates to: TYSGQTERGVGEVSSERGELPLS*QCCTDV
Trigger: GACATCCGTGCAGCACTGGCAGCTGAGAGGAAGTTC...GCCTCTCTCTGAGGAGACCTCACCCACTCCTCGCTCAGTTTGACCACTGTAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR GCA 90 bp TGTGTGGTTAATATGGCCGGGAAGGACTATGTACACCTCAGGCCTGCCAGCTGGGAACTTCCTCTCAGCTaGCAGTGCTGCACGGATGTC +
Preference number: 4 (lower is better)
Translates to: CVVNMAGKDYVHLRPASWELPLS*QCCTDV
Trigger: GACATCCGTGCAGCACTGGCAGCTGAGAGGAAGTTC...CCAGCTGGCAGGCCTGAGGTGTACATAGTCCTTCCCGGCCATATTAACCACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp TGTGTGGTTAATATGGCCGGGAAGGACTATGTACACCTCAGGCCTGCCAGCTGGAAGGCCTGCCCTACATaGGCTTTCCCAGCCCAAGAA +
Preference number: 4 (lower is better)
Translates to: CVVNMAGKDYVHLRPASWKACPT*AFPAQE
Trigger: TTCTTGGGCTGGGAAAGCCCATGTAGGGCAGGCCTT...CCAGCTGGCAGGCCTGAGGTGTACATAGTCCTTCCCGGCCATATTAACCACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp AGGCTGGGCCAGGCTCAGGCTGTGTGGTTAATATGGCCGGGAAGGACTATGTACAAACTGAGCGAGGAGTaGGTGAGGTCTCCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: RLGQAQAVWLIWPGRTMYKLSEE*VRSPQR
Trigger: TCTCTGAGGAGACCTCACCCACTCCTCGCTCAGTTT...GTACATAGTCCTTCCCGGCCATATTAACCACACAGCCTGAGCCTGGCCCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp TTCCTCGCAAGCCAAATAGGGATGAGGACGATTCCTCCACTCCAGCAGCTGGGCGTAGTGAGAGCTCACTaGGAGGAAGTGAGACAGGAG +
Preference number: 4 (lower is better)
Translates to: FLASQIGMRTIPPLQQLGVVRAH*EEVRQE
Trigger: CTCCTGTCTCACTTCCTCCCAGTGAGCTCTCACTAC...GCCCAGCTGCTGGAGTGGAGGAATCGTCCTCATCCCTATTTGGCTTGCGAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589106.1
CDS-3UTR TCA 90 bp GGGGATGTAGGCGCCCTTGGTGCCCGCACTTATAGAAGGCCTGCCCTACATGGGGGCATGTTCTGTTTTTaGGAAGATGAGCTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: GDVGALGARTYRRPALHGGMFCF*EDELQN
Trigger: ATTCTGCAGCTCATCTTCTCAAAAACAGAACATGCC...CCCATGTAGGGCAGGCCTTCTATAAGTGCGGGCACCAAGGGCGCCTACATCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR GCA 90 bp TGTGTGGTTAATATGGCCGGGAAGGACTATGTACACCTCAGGCCTGCCAGCTGGTTTGAGAAGATGAGCTaGAGAATGAGAGGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: CVVNMAGKDYVHLRPASWFEKMS*RMRGRR
Trigger: CCGGCGGCCTCTCATTCTGCAGCTCATCTTCTCAAA...CCAGCTGGCAGGCCTGAGGTGTACATAGTCCTTCCCGGCCATATTAACCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR GCA 90 bp ACTTACAGTGGTCAAACTGAGCGAGGAGTGGGTGAGGTCTCCTCAGAGAGAGGCAAATCCACCCCAAACTaGTGGACCATCTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: TYSGQTERGVGEVSSERGKSTPN*WTICSR
Trigger: CCTGCTGCAGATGGTCCAGCAGTTTGGGGTGGATTT...GCCTCTCTCTGAGGAGACCTCACCCACTCCTCGCTCAGTTTGACCACTGTAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR GCA 90 bp AGGCTGGGCCAGGCTCAGGCTGTGTGGTTAATATGGCCGGGAAGGACTATGTACAAGATGGCGAAGACGTaGTTGTTGGACATGAAGCCC +
Preference number: 4 (lower is better)
Translates to: RLGQAQAVWLIWPGRTMYKMAKT*LLDMKP
Trigger: GGGCTTCATGTCCAACAAGCACGTCTTCGCCATCTT...GTACATAGTCCTTCCCGGCCATATTAACCACACAGCCTGAGCCTGGCCCAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR GCA 90 bp ATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGGAGTGGCTCCAGGGCCCCTTTaGGCAGTGCGGTGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: INRIQSAGTYSGQTERGVAPGPL*AVRCPA
Trigger: GGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGC...CACTCCTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp ATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGGAGTGGGGTCCAGGCCGGGATaGGATTGGGGGCGCCGAGAA +
Preference number: 4 (lower is better)
Translates to: INRIQSAGTYSGQTERGVGSRPG*DWGRRE
Trigger: TTCTCGGCGCCCCCAATCCCATCCCGGCCTGGACCC...CACTCCTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp ACTTACAGTGGTCAAACTGAGCGAGGAGTGGGTGAGGTCTCCTCAGAGAGAGGCACCCCTCATTCAGGATaGTGTCAAGGGTTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: TYSGQTERGVGEVSSERGTPHSG*CQGFWS
Trigger: GGACCAGAACCCTTGACACCATCCTGAATGAGGGGT...GCCTCTCTCTGAGGAGACCTCACCCACTCCTCGCTCAGTTTGACCACTGTAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR TCA 90 bp AGTTTATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGAGGGCCCCAGACCACTaGAGCTCCTGCGCCGCGGGT +
Preference number: 4 (lower is better)
Translates to: SLLIEYRVQALTVVKLSERAPDH*SSCAAG
Trigger: ACCCGCGGCGCAGGAGCTTCAGTGGTCTGGGGCCCT...CTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAATAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR GCA 90 bp ACTTACAGTGGTCAAACTGAGCGAGGAGTGGGTGAGGTCTCCTCAGAGAGAGGCAAGATGGCGAAGACGTaGTTGTTGGACATGAAGCCC +
Preference number: 4 (lower is better)
Translates to: TYSGQTERGVGEVSSERGKMAKT*LLDMKP
Trigger: GGGCTTCATGTCCAACAAGCACGTCTTCGCCATCTT...GCCTCTCTCTGAGGAGACCTCACCCACTCCTCGCTCAGTTTGACCACTGTAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp ACTTACAGTGGTCAAACTGAGCGAGGAGTGGGTGAGGTCTCCTCAGAGAGAGGCAATGGGAACCGCTCGTaGAAGATGCGATTGATTCGG +
Preference number: 4 (lower is better)
Translates to: TYSGQTERGVGEVSSERGNGNRS*KMRLIR
Trigger: CCGAATCAATCGCATCTTCCACGAGCGGTTCCCATT...GCCTCTCTCTGAGGAGACCTCACCCACTCCTCGCTCAGTTTGACCACTGTAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp AGTTTATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGCACAGGGGCCGGCCCTaGACCGGGGCCAGCGTTAAG +
Preference number: 4 (lower is better)
Translates to: SLLIEYRVQALTVVKLSEHRGRP*TGASVK
Trigger: CTTAACGCTGGCCCCGGTCCAGGGCCGGCCCCTGTG...CTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAATAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp ATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGGAGTGCACCCCAGCAAGGCCTaGGGATGTAGGCGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: INRIQSAGTYSGQTERGVHPSKA*GCRRPW
Trigger: CCAAGGGCGCCTACATCCCCAGGCCTTGCTGGGGTG...CACTCCTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp ATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGGAGTGCTCAGGCCTGCCAGCTaGGCACTACCGAGCCCACTG +
Preference number: 4 (lower is better)
Translates to: INRIQSAGTYSGQTERGVLRPAS*ALPSPL
Trigger: CAGTGGGCTCGGTAGTGCCCAGCTGGCAGGCCTGAG...CACTCCTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR TCA 90 bp TGTGTGGTTAATATGGCCGGGAAGGACTATGTACACCTCAGGCCTGCCAGCTGGCCTCATGGTTCGTGTTaGTGTAGGACTGCTCAATGT +
Preference number: 4 (lower is better)
Translates to: CVVNMAGKDYVHLRPASWPHGSC*CRTAQC
Trigger: ACATTGAGCAGTCCTACATCAACACGAACCATGAGG...CCAGCTGGCAGGCCTGAGGTGTACATAGTCCTTCCCGGCCATATTAACCACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR GCA 90 bp TGTGTGGTTAATATGGCCGGGAAGGACTATGTACACCTCAGGCCTGCCAGCTGGTTCAGCTTGACGACCTaGTTTTTCACAATGGCCTCG +
Preference number: 4 (lower is better)
Translates to: CVVNMAGKDYVHLRPASWFSLTT*FFTMAS
Trigger: CGAGGCCATTGTGAAAAAGCAGGTCGTCAAGCTGAA...CCAGCTGGCAGGCCTGAGGTGTACATAGTCCTTCCCGGCCATATTAACCACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355667.11
ENST00000359692.10
CDS-3UTR GCA 90 bp AGTTTATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGCGCCGAGAAGGAGGCTaGTGCCCCCACGGGAACAGG +
Preference number: 4 (lower is better)
Translates to: SLLIEYRVQALTVVKLSERREGG*CPHGNR
Trigger: CCTGTTCCCGTGGGGGCAGCAGCCTCCTTCTCGGCG...CTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAATAAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp ATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGGAGTGTCTCCAAGACGTCCCTaGCGTCGGTGCCCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: INRIQSAGTYSGQTERGVSPRRP*RRCPRP
Trigger: TGGACGAGGGCACCGACGCCAGGGACGTCTTGGAGA...CACTCCTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp TGTGTGGTTAATATGGCCGGGAAGGACTATGTACACCTCAGGCCTGCCAGCTGGGCTGTGTGGTTAATATaGCCGGGAAGGACTATGTAC +
Preference number: 4 (lower is better)
Translates to: CVVNMAGKDYVHLRPASWAVWLI*PGRTMY
Trigger: GTACATAGTCCTTCCCGGCCATATTAACCACACAGC...CCAGCTGGCAGGCCTGAGGTGTACATAGTCCTTCCCGGCCATATTAACCACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR TCA 90 bp AGGCTGGGCCAGGCTCAGGCTGTGTGGTTAATATGGCCGGGAAGGACTATGTACGGCATGTTCTGTTTTTaGGAAGATGAGCTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: RLGQAQAVWLIWPGRTMYGMFCF*EDELQN
Trigger: ATTCTGCAGCTCATCTTCTCAAAAACAGAACATGCC...GTACATAGTCCTTCCCGGCCATATTAACCACACAGCCTGAGCCTGGCCCAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR GCA 90 bp ATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGGAGTGTCTGCAGATGTGGCGTaGCCATGCGGTCGGCCATGT +
Preference number: 4 (lower is better)
Translates to: INRIQSAGTYSGQTERGVSADVA*PCGRPC
Trigger: ACATGGCCGACCGCATGGGCACGCCACATCTGCAGA...CACTCCTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR GCA 90 bp AGTTTATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGGGCCCCTTTGCGCAGTaGGGTGTCCAGCCAGGCACA +
Preference number: 4 (lower is better)
Translates to: SLLIEYRVQALTVVKLSEGPFAQ*GVQPGT
Trigger: TGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCC...CTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAATAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp AGTTTATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGCAGGGATGGCTCGGCTaGGCGGATAATGGTGGGCCG +
Preference number: 4 (lower is better)
Translates to: SLLIEYRVQALTVVKLSEQGWLG*ADNGGP
Trigger: CGGCCCACCATTATCCGCCCAGCCGAGCCATCCCTG...CTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAATAAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR TCA 90 bp ATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGGAGTGTCCAGAGTGTCCACCTaGTCTCCTGAGCCCTCGATC +
Preference number: 4 (lower is better)
Translates to: INRIQSAGTYSGQTERGVSRVST*SPEPSI
Trigger: GATCGAGGGCTCAGGAGATCAGGTGGACACTCTGGA...CACTCCTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR TCA 90 bp AGTTTATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGCGTGGAAGATGCGATTaGTTCGGGCGCCCCCGGAGA +
Preference number: 4 (lower is better)
Translates to: SLLIEYRVQALTVVKLSERGRCD*FGRPRR
Trigger: TCTCCGGGGGCGCCCGAATCAATCGCATCTTCCACG...CTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAATAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR GCA 90 bp ATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGGAGTGGAGCTGAAGGCGTCCTaGAGTTTGTTGACCAGCGGG +
Preference number: 4 (lower is better)
Translates to: INRIQSAGTYSGQTERGVELKAS*SLLTSG
Trigger: CCCGCTGGTCAACAAACTGCAGGACGCCTTCAGCTC...CACTCCTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR GCA 90 bp ATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGGAGTGGACCCTGTCGGTCTCTaGTTCAATCTCCTGCCGGAC +
Preference number: 4 (lower is better)
Translates to: INRIQSAGTYSGQTERGVDPVGL*FNLLPD
Trigger: GTCCGGCAGGAGATTGAAGCAGAGACCGACAGGGTC...CACTCCTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp ATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGGAGTGTGCGTGCTCCTCTGCTaGGCATTGGCAAACCCGATG +
Preference number: 4 (lower is better)
Translates to: INRIQSAGTYSGQTERGVCVLLC*ALANPM
Trigger: CATCGGGTTTGCCAATGCCCAGCAGAGGAGCACGCA...CACTCCTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp ATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGGAGTGCTAGTCGAGCAGGGATaGCTCGGCTGGGCGGATAAT +
Preference number: 4 (lower is better)
Translates to: INRIQSAGTYSGQTERGVLVEQG*LGWADN
Trigger: ATTATCCGCCCAGCCGAGCCATCCCTGCTCGACTAG...CACTCCTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR TCA 90 bp ATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGGAGTGCCACATCACGGATCTTaGGGTTGTCCAGAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: INRIQSAGTYSGQTERGVPHHGS*GCPEAA
Trigger: TGCTGCCTCTGGACAACCTCAAGATCCGTGATGTGG...CACTCCTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp ATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGGAGTGTCCATGAGGCTGCTCTaGTCTGCCGAGGAGTATAGG +
Preference number: 4 (lower is better)
Translates to: INRIQSAGTYSGQTERGVSMRLL*SAEEYR
Trigger: CCTATACTCCTCGGCAGACCAGAGCAGCCTCATGGA...CACTCCTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp ATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGGAGTGGGAAGAGGTCACTGTTaGCAAACACGCTCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: INRIQSAGTYSGQTERGVGRGHC*QTRSGV
Trigger: GACCCCAGAGCGTGTTTGCCAACAGTGACCTCTTCC...CACTCCTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR TCA 90 bp AGTTTATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGTCTGGCCGATGGAGCTaGAGGCGTCCTGCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: SLLIEYRVQALTVVKLSESGRWS*RRPAVC
Trigger: ACAAACTGCAGGACGCCTTCAGCTCCATCGGCCAGA...CTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAATAAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR TCA 90 bp AGTTTATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGACCAGGATCTCCCCCTaGTTGGGGATGGCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: SLLIEYRVQALTVVKLSETRISP*LGMALF
Trigger: GAAGAGAGCCATCCCCAATCAGGGGGAGATCCTGGT...CTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAATAAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355667.11
ENST00000389253.9
CDS-3UTR GCA 90 bp ATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGGAGTGAAATCCACCCCAAACTaGTGGACCATCTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: INRIQSAGTYSGQTERGVKSTPN*WTICSR
Trigger: CCTGCTGCAGATGGTCCAGCAGTTTGGGGTGGATTT...CACTCCTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR TCA 90 bp ATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGGAGTGGCAGGATCATGTCCTTaGTCTGGTACTCGATGTCTG +
Preference number: 4 (lower is better)
Translates to: INRIQSAGTYSGQTERGVAGSCP*SGTRCL
Trigger: CAGACATCGAGTACCAGATCAAGGACATGATCCTGC...CACTCCTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR GCA 90 bp AGTTTATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGAAGTTGATATACCCCTaGACCCCAGCAAGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: SLLIEYRVQALTVVKLSEKLIYP*TPARPG
Trigger: CCCAGGCCTTGCTGGGGTGCAGGGGTATATCAACTT...CTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAATAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp AGTTTATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGGCCAGCAGCTCGTGGTaGATGAAGGCCTTCGTATTG +
Preference number: 4 (lower is better)
Translates to: SLLIEYRVQALTVVKLSEASSSW*MKAFVL
Trigger: CAATACGAAGGCCTTCATCCACCACGAGCTGCTGGC...CTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAATAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR GCA 90 bp AGTTTATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGAAATCCACCCCAAACTaGTGGACCATCTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SLLIEYRVQALTVVKLSEKSTPN*WTICSR
Trigger: CCTGCTGCAGATGGTCCAGCAGTTTGGGGTGGATTT...CTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAATAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp ATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGGAGTGATCATGTCCTTGATCTaGTACTCGATGTCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: INRIQSAGTYSGQTERGVIMSLI*YSMSGG
Trigger: GCCTCCAGACATCGAGTACCAGATCAAGGACATGAT...CACTCCTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR GCA 90 bp AGTTTATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGAAGATGGCGAAGACGTaGTTGTTGGACATGAAGCCC +
Preference number: 4 (lower is better)
Translates to: SLLIEYRVQALTVVKLSEKMAKT*LLDMKP
Trigger: GGGCTTCATGTCCAACAAGCACGTCTTCGCCATCTT...CTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAATAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CCA 90 bp AGTTTATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGTGCGGATCACCTGATTaGGGATGGCTCTCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: SLLIEYRVQALTVVKLSECGSPD*GWLSSC
Trigger: ACAAGAAGAGAGCCATCCCCAATCAGGTGATCCGCA...CTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAATAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359692.10
CDS-3UTR CAA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCTCTTCCATCCCGCGGTaGCCCATGGCGCCGGCGGCC +
Preference number: 5 (lower is better)
Translates to: LELQGPFAQCGVQPGTGASSIPR*PMAPAA
Trigger: GGCCGCCGGCGCCATGGGCAACCGCGGGATGGAAGA...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CAA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGCAGGCCGGGATGGGATaGGGGGCGCCGAGAAGGAGG +
Preference number: 5 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRQAGMG*GAPRRR
Trigger: CCTCCTTCTCGGCGCCCCCAATCCCATCCCGGCCTG...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CAA 90 bp GCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCAGCCAGGCCGGGATGGGATaGGGGGCGCCGAGAAGGAGG +
Preference number: 5 (lower is better)
Translates to: ARPARANGSGPSKGTSGSQAGMG*GAPRRR
Trigger: CCTCCTTCTCGGCGCCCCCAATCCCATCCCGGCCTG...GCTGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGAGCTCCAGGGCCCCTTaGCGCAGTGCGGTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRSSRAP*RSAVSS
Trigger: GCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCT...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CAA 90 bp GCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCAGCAGCTCCAGGGCCCCTTaGCGCAGTGCGGTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: ARPARANGSGPSKGTSGSSSRAP*RSAVSS
Trigger: GCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCT...GCTGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp AATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTTCTTCCATCCCGCGGTaGCCCATGGCGCCGGCGGCC +
Preference number: 5 (lower is better)
Translates to: NRARPARANGSGPSKGTSSSIPR*PMAPAA
Trigger: GGCCGCCGGCGCCATGGGCAACCGCGGGATGGAAGA...AGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTATT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp GCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCAGCTCGCCCACAGGCACCTaGGTGATACCCGGGAGGTCG +
Preference number: 5 (lower is better)
Translates to: ARPARANGSGPSKGTSGSSPTGT*VIPGRS
Trigger: CGACCTCCCGGGTATCACCAAGGTGCCTGTGGGCGA...GCTGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGAGCAGGGCTTTGGTTTaGCGGGTGGGGTCGTCGGGC +
Preference number: 5 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRSRALV*RVGSSG
Trigger: GCCCGACGACCCCACCCGCAAAACCAAAGCCCTGCT...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CAA 90 bp TGGGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCAGGCCGGGATGGGATaGGGGGCGCCGAGAAGGAGG +
Preference number: 5 (lower is better)
Translates to: WEPGPSIGAAEGPRPLKLQAGMG*GAPRRR
Trigger: CCTCCTTCTCGGCGCCCCCAATCCCATCCCGGCCTG...GAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CAA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCAGCTCCAGGGCCCCTTaGCGCAGTGCGGTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: LELQGPFAQCGVQPGTGASSRAP*RSAVSS
Trigger: GCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCT...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS CCA 90 bp AGGCCGTTGCGGGCTAGGGTGCACAGTGACAGGCAGGCAGGCACATaGGGCGGTATGGGTGGCAGGGCAGGCAGGGGGCGGCAAAGCAGG +
Preference number: 5 (lower is better)
Translates to: RPLRARVHSDRQAGT*GGMGGRAGRGRQSR
Trigger: CCTGCTTTGCCGCCCCCTGCCTGCCCTGCCACCCATACCGCCCCATGTGCCTGCCTGCCTGTCACTGTGCACCCTAGCCCGCAACGGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS CCA 90 bp ACGGCACGGCAGGAGCGCCAGAGATGGGGCCTCCAGGAATCCCTCTaGGGCCCAGATGCTGTCCTAGTCGGGGGCGGTCCTCTGGAGGGG +
Preference number: 5 (lower is better)
Translates to: TARQERQRWGLQESL*GPDAVLVGGGPLEG
Trigger: CCCCTCCAGAGGACCGCCCCCGACTAGGACAGCATCTGGGCCCCAGAGGGATTCCTGGAGGCCCCATCTCTGGCGCTCCTGCCGTGCCGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS CCA 90 bp ATGGACAGCTGCGAAGGGCTGGCCTGCATCCCCCAGTGCAGGGCATaGCAGGGCACGGCACGGCAGGAGCGCCAGAGATGGGGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: MDSCEGLACIPQCRA*QGTARQERQRWGLQ
Trigger: CTGGAGGCCCCATCTCTGGCGCTCCTGCCGTGCCGTGCCCTGCCATGCCCTGCACTGGGGGATGCAGGCCAGCCCTTCGCAGCTGTCCAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS-3UTR CAA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGTTGGCCAGGTCCATGTaGGCGGGCGTGACAGCCAGA +
Preference number: 5 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRLARSM*AGVTAR
Trigger: TCTGGCTGTCACGCCCGCCAACATGGACCTGGCCAA...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CAA 90 bp GCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCAGCACTTCCTTGGCCAGCTaGAGGGCGTCGGAGTTGGCC +
Preference number: 5 (lower is better)
Translates to: ARPARANGSGPSKGTSGSTSLAS*RASELA
Trigger: GGCCAACTCCGACGCCCTCAAGCTGGCCAAGGAAGT...GCTGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp GCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCAGCTCGTGGAAGATGCGATaGATTCGGGCGCCCCCGGAG +
Preference number: 5 (lower is better)
Translates to: ARPARANGSGPSKGTSGSSWKMR*IRAPPE
Trigger: CTCCGGGGGCGCCCGAATCAATCGCATCTTCCACGA...GCTGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGTCGTGGAAGATGCGATaGATTCGGGCGCCCCCGGAG +
Preference number: 5 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRSWKMR*IRAPPE
Trigger: CTCCGGGGGCGCCCGAATCAATCGCATCTTCCACGA...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CAA 90 bp TGGGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCAGCTCCAGGGCCCCTTaGCGCAGTGCGGTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: WEPGPSIGAAEGPRPLKLSSRAP*RSAVSS
Trigger: GCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCT...GAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS GCA 90 bp AGCATGGCCATGGACAGCTGCGAAGGGCTGGCCTGCATCCCCCAGTaGAGGGCATGGCAGGGCACGGCACGGCAGGAGCGCCAGAGATGG +
Preference number: 5 (lower is better)
Translates to: SMAMDSCEGLACIPQ*RAWQGTARQERQRW
Trigger: CCATCTCTGGCGCTCCTGCCGTGCCGTGCCCTGCCATGCCCTGCACTGGGGGATGCAGGCCAGCCCTTCGCAGCTGTCCATGGCCATGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS GCA 90 bp AAGGGTGGGCTGAGCATGGCCATGGACAGCTGCGAAGGGCTGGCCTaGATCCCCCAGTGCAGGGCATGGCAGGGCACGGCACGGCAGGAG +
Preference number: 5 (lower is better)
Translates to: KGGLSMAMDSCEGLA*IPQCRAWQGTARQE
Trigger: CTCCTGCCGTGCCGTGCCCTGCCATGCCCTGCACTGGGGGATGCAGGCCAGCCCTTCGCAGCTGTCCATGGCCATGCTCAGCCCACCCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS CCA 90 bp GGAAGCCTGCCTGACCCCTCAAGGCAAGGCCCAGTGGCCGCCCTCTaGACACCCACAAGCCCTGCACGGCCCCGCCCAGCACTAAGCACA +
Preference number: 5 (lower is better)
Translates to: GSLPDPSRQGPVAAL*TPTSPARPRPALST
Trigger: TGTGCTTAGTGCTGGGCGGGGCCGTGCAGGGCTTGTGGGTGTCCAGAGGGCGGCCACTGGGCCTTGCCTTGAGGGGTCAGGCAGGCTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000682285.1
ENST00000683738.1
CDS-3UTR CAA 90 bp TGGGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCTCGCCCACAGGCACCTaGGTGATACCCGGGAGGTCG +
Preference number: 5 (lower is better)
Translates to: WEPGPSIGAAEGPRPLKLSPTGT*VIPGRS
Trigger: CGACCTCCCGGGTATCACCAAGGTGCCTGTGGGCGA...GAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CAA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCTTGGCCAGGTCCATGTaGGCGGGCGTGACAGCCAGA +
Preference number: 5 (lower is better)
Translates to: LELQGPFAQCGVQPGTGALARSM*AGVTAR
Trigger: TCTGGCTGTCACGCCCGCCAACATGGACCTGGCCAA...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CAA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGAGCTGGCTCTGTAGTTaGCTACGTAGGGCCGGCAGC +
Preference number: 5 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRSWLCS*LRRAGS
Trigger: GCTGCCGGCCCTACGTAGCAAACTACAGAGCCAGCT...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CAA 90 bp ATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGAGCAGGGCTTTGGTTTaGCGGGTGGGGTCGTCGGGC +
Preference number: 5 (lower is better)
Translates to: IGQGRPGPTAPGLAKAPLSRALV*RVGSSG
Trigger: GCCCGACGACCCCACCCGCAAAACCAAAGCCCTGCT...CAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp GGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCAATCTGCAGCAGGGCTTaGGTTTTGCGGGTGGGGTCG +
Preference number: 5 (lower is better)
Translates to: GQGRPGPTAPGLAKAPLAICSRA*VLRVGS
Trigger: CGACCCCACCCGCAAAACCAAAGCCCTGCTGCAGAT...TGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS GCA 90 bp GGGGTGGGAGAGACAGAAGAGGCGGCAGGCCGTTGCGGGCTAGGGTaGACAGTGACAGGCAGGCAGGCACATGGGGCGGTATGGGTGGCA +
Preference number: 5 (lower is better)
Translates to: GVGETEEAAGRCGLG*TVTGRQAHGAVWVA
Trigger: TGCCACCCATACCGCCCCATGTGCCTGCCTGCCTGTCACTGTGCACCCTAGCCCGCAACGGCCTGCCGCCTCTTCTGTCTCTCCCACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS GCA 90 bp GCCTCCATACTCCTAGGCCTGGCCCGGTTTCTAAGGAGAGGGATGTaGCCGCACACCCCTCGGTGGCCTGGCTCTCCTGCCTCCAGCCGG +
Preference number: 5 (lower is better)
Translates to: ASILLGLARFLRRGM*PHTPRWPGSPASSR
Trigger: CCGGCTGGAGGCAGGAGAGCCAGGCCACCGAGGGGTGTGCGGGCACATCCCTCTCCTTAGAAACCGGGCCAGGCCTAGGAGTATGGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS CCA 90 bp CTCCCCTGGACCTGCAGGGCCCTCCTGGCGATGGGGCCTGGCCGCTaGCTCTCTTACCTCTACCTGCCTGGTCTGGTAGCCTTCCTTCCC +
Preference number: 5 (lower is better)
Translates to: LPWTCRALLAMGPGR*LSYLYLPGLVAFLP
Trigger: GGGAAGGAAGGCTACCAGACCAGGCAGGTAGAGGTAAGAGAGCCAGCGGCCAGGCCCCATCGCCAGGAGGGCCCTGCAGGTCCAGGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683738.1
CDS-3UTR CAA 90 bp TGGGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCTTGGCCAGGTCCATGTaGGCGGGCGTGACAGCCAGA +
Preference number: 5 (lower is better)
Translates to: WEPGPSIGAAEGPRPLKLLARSM*AGVTAR
Trigger: TCTGGCTGTCACGCCCGCCAACATGGACCTGGCCAA...GAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CAA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTACTTCCTTGGCCAGCTaGAGGGCGTCGGAGTTGGCC +
Preference number: 5 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPTSLAS*RASELA
Trigger: GGCCAACTCCGACGCCCTCAAGCTGGCCAAGGAAGT...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CAA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCAGCTGGCTCTGTAGTTaGCTACGTAGGGCCGGCAGC +
Preference number: 5 (lower is better)
Translates to: LELQGPFAQCGVQPGTGASWLCS*LRRAGS
Trigger: GCTGCCGGCCCTACGTAGCAAACTACAGAGCCAGCT...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CAA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCATCTGCAGCAGGGCTTaGGTTTTGCGGGTGGGGTCG +
Preference number: 5 (lower is better)
Translates to: LELQGPFAQCGVQPGTGAICSRA*VLRVGS
Trigger: CGACCCCACCCGCAAAACCAAAGCCCTGCTGCAGAT...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CAA 90 bp TGGGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCTCGTGGAAGATGCGATaGATTCGGGCGCCCCCGGAG +
Preference number: 5 (lower is better)
Translates to: WEPGPSIGAAEGPRPLKLSWKMR*IRAPPE
Trigger: CTCCGGGGGCGCCCGAATCAATCGCATCTTCCACGA...GAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CAA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGCTCCTCTGCTGGGCATaGGCAAACCCGATGAAGTCC +
Preference number: 5 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRLLCWA*ANPMKS
Trigger: GGACTTCATCGGGTTTGCCAATGCCCAGCAGAGGAG...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CAA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGGGGAAGAGGTCACTGTaGGCAAACACGCTCTGGGGT +
Preference number: 5 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRGKRSL*ANTLWG
Trigger: ACCCCAGAGCGTGTTTGCCAACAGTGACCTCTTCCC...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CAA 90 bp GGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCAGGGAAGAGGTCACTGTaGGCAAACACGCTCTGGGGT +
Preference number: 5 (lower is better)
Translates to: GQGRPGPTAPGLAKAPLAGKRSL*ANTLWG
Trigger: ACCCCAGAGCGTGTTTGCCAACAGTGACCTCTTCCC...TGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS TCA 90 bp GTGTGGGGTCGGATGCCTGAGTCCACTGCCCGGAAACCCTCAGGGTaGCCCGAGGACCCCACGGCGATGGAAGGGCAGACACCTGGAGCA +
Preference number: 5 (lower is better)
Translates to: VWGRMPESTARKPSG*PEDPTAMEGQTPGA
Trigger: TGCTCCAGGTGTCTGCCCTTCCATCGCCGTGGGGTCCTCGGGTCACCCTGAGGGTTTCCGGGCAGTGGACTCAGGCATCCGACCCCACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593220.1
CDS GCA 90 bp AAGGAGAGGGATGTGCCCGCACACCCCTCGGTGGCCTGGCTCTCCTaGCTCCAGCCGGGGTTAGTGTTGGTCAGAGCTGGAGCACAGGGC +
Preference number: 5 (lower is better)
Translates to: KERDVPAHPSVAWLS*LQPGLVLVRAGAQG
Trigger: GCCCTGTGCTCCAGCTCTGACCAACACTAACCCCGGCTGGAGGCAGGAGAGCCAGGCCACCGAGGGGTGTGCGGGCACATCCCTCTCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS CCA 90 bp CCCTGGGAGCTGCAGGAAGCACACGGAGGCACGCACAGGGCGGCCTaGGACCCAGGCACTGACAGACTTGGCCAAGCTACAAAGGGTGGG +
Preference number: 5 (lower is better)
Translates to: PWELQEAHGGTHRAA*DPGTDRLGQATKGG
Trigger: CCCACCCTTTGTAGCTTGGCCAAGTCTGTCAGTGCCTGGGTCCCAGGCCGCCCTGTGCGTGCCTCCGTGTGCTTCCTGCAGCTCCCAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS-3UTR CAA 90 bp TGGGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCACTGGGGAGATGCCTTaGTTGGTCCCCGTGACCCTG +
Preference number: 5 (lower is better)
Translates to: WEPGPSIGAAEGPRPLKLTGEMP*LVPVTL
Trigger: CAGGGTCACGGGGACCAACAAAGGCATCTCCCCAGT...GAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CAA 90 bp TGGGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCAGCTGGCTCTGTAGTTaGCTACGTAGGGCCGGCAGC +
Preference number: 5 (lower is better)
Translates to: WEPGPSIGAAEGPRPLKLSWLCS*LRRAGS
Trigger: GCTGCCGGCCCTACGTAGCAAACTACAGAGCCAGCT...GAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CAA 90 bp TGGGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCATCTGCAGCAGGGCTTaGGTTTTGCGGGTGGGGTCG +
Preference number: 5 (lower is better)
Translates to: WEPGPSIGAAEGPRPLKLICSRA*VLRVGS
Trigger: CGACCCCACCCGCAAAACCAAAGCCCTGCTGCAGAT...GAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CAA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCCTCCTCTGCTGGGCATaGGCAAACCCGATGAAGTCC +
Preference number: 5 (lower is better)
Translates to: LELQGPFAQCGVQPGTGALLCWA*ANPMKS
Trigger: GGACTTCATCGGGTTTGCCAATGCCCAGCAGAGGAG...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CAA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGATCAGGCTGATGTTGTaGATGGTCAGCCAGCCCCTG +
Preference number: 5 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRIRLML*MVSQPL
Trigger: CAGGGGCTGGCTGACCATCAACAACATCAGCCTGAT...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CAA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGGAAGAGGTCACTGTaGGCAAACACGCTCTGGGGT +
Preference number: 5 (lower is better)
Translates to: LELQGPFAQCGVQPGTGAGKRSL*ANTLWG
Trigger: ACCCCAGAGCGTGTTTGCCAACAGTGACCTCTTCCC...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS GCA 90 bp CCATGCGGACCCGGCTGGAGCGCAGCATCCAGATGCTCACGCTACTaGGGGCCTTCGAGGCACGTGACCGCAACCTGCAAGAGGGCAACT +
Preference number: 5 (lower is better)
Translates to: PCGPGWSAASRCSRY*GPSRHVTATCKRAT
Trigger: AGTTGCCCTCTTGCAGGTTGCGGTCACGTGCCTCGAAGGCCCGCAGTAGCGTGAGCATCTGGATGCTGCGCTCCAGCCGGGTCCGCATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591818.1
ENST00000593203.1
CDS CCA 90 bp TGGGCTCGGGGGCTGGGACCATGCCAGGTGCTCACGCTGCCTCCCTaGAGATCAGCTAAGGCCCAGCACCAAGTGGGCACCTACTTGGAG +
Preference number: 5 (lower is better)
Translates to: WARGLGPCQVLTLPP*RSAKAQHQVGTYLE
Trigger: CTCCAAGTAGGTGCCCACTTGGTGCTGGGCCTTAGCTGATCTCCAGGGAGGCAGCGTGAGCACCTGGCATGGTCCCAGCCCCCGAGCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591266.1
CDS CCA 90 bp CTCCCGCTGCCCTGTAGGAGTCCATTGAGACCATGCGGACCCGGCTaGAGCGCAGCATCCAGATGCTCACGCTACTGCGGGCCTTCGAGG +
Preference number: 5 (lower is better)
Translates to: LPLPCRSPLRPCGPG*SAASRCSRYCGPSR
Trigger: CCTCGAAGGCCCGCAGTAGCGTGAGCATCTGGATGCTGCGCTCCAGCCGGGTCCGCATGGTCTCAATGGACTCCTACAGGGCAGCGGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591818.1
ENST00000593203.1
CDS CCA 90 bp GGCCCCATGAGTCTCCTTCCGTCCTCAGCGGGCAGGGAACACCTCTaGCTTGTAGAAGGGACGGCTCAGTGGCTGCACCGACGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: GPMSLLPSSAGREHL*LVEGTAQWLHRRSW
Trigger: CCAGGACCGTCGGTGCAGCCACTGAGCCGTCCCTTCTACAAGCCAGAGGTGTTCCCTGCCCGCTGAGGACGGAAGGAGACTCATGGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593203.1
CDS-3UTR CAA 90 bp AATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTACTGGGGAGATGCCTTaGTTGGTCCCCGTGACCCTG +
Preference number: 5 (lower is better)
Translates to: NRARPARANGSGPSKGTSTGEMP*LVPVTL
Trigger: CAGGGTCACGGGGACCAACAAAGGCATCTCCCCAGT...AGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp TGGGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTCCTCTGCTGGGCATaGGCAAACCCGATGAAGTCC +
Preference number: 5 (lower is better)
Translates to: WEPGPSIGAAEGPRPLKLLLCWA*ANPMKS
Trigger: GGACTTCATCGGGTTTGCCAATGCCCAGCAGAGGAG...GAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CAA 90 bp GGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCAATGGCGAAGACGTGCTaGTTGGACATGAAGCCCTTC +
Preference number: 5 (lower is better)
Translates to: GQGRPGPTAPGLAKAPLAMAKTC*LDMKPF
Trigger: GAAGGGCTTCATGTCCAACAAGCACGTCTTCGCCAT...TGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGATGGCGAAGACGTGCTaGTTGGACATGAAGCCCTTC +
Preference number: 5 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRMAKTC*LDMKPF
Trigger: GAAGGGCTTCATGTCCAACAAGCACGTCTTCGCCAT...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CAA 90 bp GCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCAGCTCGCGGATGGACTTGTaGATGATGGCCACGTATGAG +
Preference number: 5 (lower is better)
Translates to: ARPARANGSGPSKGTSGSSRMDL*MMATYE
Trigger: CTCATACGTGGCCATCATCAACAAGTCCATCCGCGA...GCTGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGTCGCGGATGGACTTGTaGATGATGGCCACGTATGAG +
Preference number: 5 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRSRMDL*MMATYE
Trigger: CTCATACGTGGCCATCATCAACAAGTCCATCCGCGA...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS TCA 90 bp GGGACCCAGGCACTGACAGACTTGGCCAAGCTACAAAGGGTGGGCTaGGCATGGCCATGGACAGCTGCGAAGGGCTGGCCTGCATCCCCC +
Preference number: 5 (lower is better)
Translates to: GTQALTDLAKLQRVG*AWPWTAAKGWPASP
Trigger: GGGGGATGCAGGCCAGCCCTTCGCAGCTGTCCATGGCCATGCTCAGCCCACCCTTTGTAGCTTGGCCAAGTCTGTCAGTGCCTGGGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS TCA 90 bp GGAAGCACACGGAGGCACGCACAGGGCGGCCTGGGACCCAGGCACTaGCAGACTTGGCCAAGCTACAAAGGGTGGGCTGAGCATGGCCAT +
Preference number: 5 (lower is better)
Translates to: GSTRRHAQGGLGPRH*QTWPSYKGWAEHGH
Trigger: ATGGCCATGCTCAGCCCACCCTTTGTAGCTTGGCCAAGTCTGTCAGTGCCTGGGTCCCAGGCCGCCCTGTGCGTGCCTCCGTGTGCTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS TCA 90 bp CTGCCAAAACGGGAGTGTGCAGTCAGGGCCTGCGGTCTGGCCCCATaGGTCTCCTTCCGTCCTCAGCGGGCAGGGAACACCTCTGGCTTG +
Preference number: 5 (lower is better)
Translates to: LPKRECAVRACGLAP*VSFRPQRAGNTSGL
Trigger: CAAGCCAGAGGTGTTCCCTGCCCGCTGAGGACGGAAGGAGACTCATGGGGCCAGACCGCAGGCCCTGACTGCACACTCCCGTTTTGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593203.1
CDS GCA 90 bp AGTCCATTGAGACCATGCGGACCCGGCTGGAGCGCAGCATCCAGATaGTCACGCTACTGCGGGCCTTCGAGGCACGTGACCGCAACCTGC +
Preference number: 5 (lower is better)
Translates to: SPLRPCGPGWSAASR*SRYCGPSRHVTATC
Trigger: GCAGGTTGCGGTCACGTGCCTCGAAGGCCCGCAGTAGCGTGAGCATCTGGATGCTGCGCTCCAGCCGGGTCCGCATGGTCTCAATGGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591818.1
ENST00000593203.1
CDS GCA 90 bp CTGACCCTTCCCCTCCCGCTGCCCTGTAGGAGTCCATTGAGACCATaGGGACCCGGCTGGAGCGCAGCATCCAGATGCTCACGCTACTGC +
Preference number: 5 (lower is better)
Translates to: LTLPLPLPCRSPLRP*GPGWSAASRCSRYC
Trigger: GCAGTAGCGTGAGCATCTGGATGCTGCGCTCCAGCCGGGTCCGCATGGTCTCAATGGACTCCTACAGGGCAGCGGGAGGGGAAGGGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591818.1
ENST00000593203.1
CDS CCA 90 bp CCGGTTTCTAAGGAGAGGGATGTGCCCGCACACCCCTCGGTGGCCTaGCTCTCCTGCCTCCAGCCGGGGTTAGTGTTGGTCAGAGCTGGA +
Preference number: 5 (lower is better)
Translates to: PVSKERDVPAHPSVA*LSCLQPGLVLVRAG
Trigger: TCCAGCTCTGACCAACACTAACCCCGGCTGGAGGCAGGAGAGCCAGGCCACCGAGGGGTGTGCGGGCACATCCCTCTCCTTAGAAACCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS CCA 90 bp CCTGGCGATGGGGCCTGGCCGCTGGCTCTCTTACCTCTACCTGCCTaGTCTGGTAGCCTTCCTTCCCTGGGTCCAATTCTCTGGGTCCCC +
Preference number: 5 (lower is better)
Translates to: PGDGAWPLALLPLPA*SGSLPSLGPILWVP
Trigger: GGGGACCCAGAGAATTGGACCCAGGGAAGGAAGGCTACCAGACCAGGCAGGTAGAGGTAAGAGAGCCAGCGGCCAGGCCCCATCGCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683738.1
CDS-3UTR CAA 90 bp TGGGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTCAACGGGAGCAACTaGTTCTCCAAGACGTCCCTG +
Preference number: 5 (lower is better)
Translates to: WEPGPSIGAAEGPRPLKLLNGSN*FSKTSL
Trigger: CAGGGACGTCTTGGAGAACAAGTTGCTCCCGTTGAG...GAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CAA 90 bp GCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCAGCGATGTGGTTGGTCAGTaGCTGATTCAGCGTCTTCTG +
Preference number: 5 (lower is better)
Translates to: ARPARANGSGPSKGTSGSDVVGQ*LIQRLL
Trigger: CAGAAGACGCTGAATCAGCAACTGACCAACCACATC...GCTGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp GGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCAGATGTGGTTGGTCAGTaGCTGATTCAGCGTCTTCTG +
Preference number: 5 (lower is better)
Translates to: GQGRPGPTAPGLAKAPLADVVGQ*LIQRLL
Trigger: CAGAAGACGCTGAATCAGCAACTGACCAACCACATC...TGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGGATGTGGTTGGTCAGTaGCTGATTCAGCGTCTTCTG +
Preference number: 5 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRDVVGQ*LIQRLL
Trigger: CAGAAGACGCTGAATCAGCAACTGACCAACCACATC...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CAA 90 bp GGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCGGCAGGGCTCTTTCAGCTaGACGACCTGCTTTTTCACA +
Preference number: 5 (lower is better)
Translates to: GAPGPLCAVRCPARHRGRQGSFS*TTCFFT
Trigger: TGTGAAAAAGCAGGTCGTCAAGCTGAAAGAGCCCTG...CCGGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355667.11
ENST00000359692.10
CDS-3UTR CAA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTATCAGGCTGATGTTGTaGATGGTCAGCCAGCCCCTG +
Preference number: 5 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPIRLML*MVSQPL
Trigger: CAGGGGCTGGCTGACCATCAACAACATCAGCCTGAT...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CAA 90 bp TGGGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCATCAGGCTGATGTTGTaGATGGTCAGCCAGCCCCTG +
Preference number: 5 (lower is better)
Translates to: WEPGPSIGAAEGPRPLKLIRLML*MVSQPL
Trigger: CAGGGGCTGGCTGACCATCAACAACATCAGCCTGAT...GAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CAA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCTTCATCAGGCTGATGTaGTTGATGGTCAGCCAGCCC +
Preference number: 5 (lower is better)
Translates to: LELQGPFAQCGVQPGTGAFIRLM*LMVSQP
Trigger: GGGCTGGCTGACCATCAACAACATCAGCCTGATGAA...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CAA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTGCGAAGACGTGCTTGTaGGACATGAAGCCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPAKTCL*DMKPFS
Trigger: GGAGAAGGGCTTCATGTCCAACAAGCACGTCTTCGC...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CAA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCTTTCTCTGCTCCGTGTaGAAGATGGCGAAGACGTGC +
Preference number: 5 (lower is better)
Translates to: LELQGPFAQCGVQPGTGAFLCSV*KMAKTC
Trigger: GCACGTCTTCGCCATCTTCAACACGGAGCAGAGAAA...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CAA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCAGGTCGCGGATGGACTaGTTGATGATGGCCACGTAT +
Preference number: 5 (lower is better)
Translates to: LELQGPFAQCGVQPGTGARSRMD*LMMATY
Trigger: ATACGTGGCCATCATCAACAAGTCCATCCGCGACCT...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS TCA 90 bp CCCTGGGATTGCCAGAAGAGCCCCGCCAGAGGGCAGTGGCAGGGATaGCCAGCGCCTTGGTGGCTGGCAGTGGGAGAATGTCCAGCAAAA +
Preference number: 5 (lower is better)
Translates to: PWDCQKSPARGQWQG*PAPWWLAVGECPAK
Trigger: TTTTGCTGGACATTCTCCCACTGCCAGCCACCAAGGCGCTGGTCATCCCTGCCACTGCCCTCTGGCGGGGCTCTTCTGGCAATCCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS GCA 90 bp GTGCAAAAACTCGGCATGTTAGGCTGGGCTCGGGGGCTGGGACCATaGCAGGTGCTCACGCTGCCTCCCTGGAGATCAGCTAAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: VQKLGMLGWARGLGP*QVLTLPPWRSAKAQ
Trigger: CTGGGCCTTAGCTGATCTCCAGGGAGGCAGCGTGAGCACCTGGCATGGTCCCAGCCCCCGAGCCCAGCCTAACATGCCGAGTTTTTGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000591266.1
CDS GCA 90 bp CCTGCATGTGGTCTTCCTCTGAGGGTGGGGAGCTGGGTGTGGGTTTaGCCACTGCTCTATCACAGGGCCCAGCGAGAGGGCATACCAGCG +
Preference number: 5 (lower is better)
Translates to: PACGLPLRVGSWVWV*PLLYHRAQREGIPA
Trigger: CGCTGGTATGCCCTCTCGCTGGGCCCTGTGATAGAGCAGTGGGCAAACCCACACCCAGCTCCCCACCCTCAGAGGAAGACCACATGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682285.1
ENST00000683738.1
CDS CCA 90 bp TGCGGGCCTTCGAGGCACGTGACCGCAACCTGCAAGAGGGCAACTTaGAGCGGGTCAACTTCTGGTCAGCTGTCAACGTGGCGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: CGPSRHVTATCKRAT*SGSTSGQLSTWRCC
Trigger: GCAGCACCGCCACGTTGACAGCTGACCAGAAGTTGACCCGCTCCAAGTTGCCCTCTTGCAGGTTGCGGTCACGTGCCTCGAAGGCCCGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591818.1
ENST00000593203.1
CDS CCA 90 bp GGACGGCTCAGTGGCTGCACCGACGGTCCTGGAAATCTCACATGGTaGGCACTGCAGCGTTGGAACGTGAGCCTCGGATTTCCTGGCCCC +
Preference number: 5 (lower is better)
Translates to: GRLSGCTDGPGNLTW*ALQRWNVSLGFPGP
Trigger: GGGGCCAGGAAATCCGAGGCTCACGTTCCAACGCTGCAGTGCCCACCATGTGAGATTTCCAGGACCGTCGGTGCAGCCACTGAGCCGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593203.1
CDS CCA 90 bp CCCCATCGGTTCCCTGCATGTGGTCTTCCTCTGAGGGTGGGGAGCTaGGTGTGGGTTTGCCCACTGCTCTATCACAGGGCCCAGCGAGAG +
Preference number: 5 (lower is better)
Translates to: PHRFPACGLPLRVGS*VWVCPLLYHRAQRE
Trigger: CTCTCGCTGGGCCCTGTGATAGAGCAGTGGGCAAACCCACACCCAGCTCCCCACCCTCAGAGGAAGACCACATGCAGGGAACCGATGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000682285.1
ENST00000683738.1
CDS-3UTR CAA 90 bp TGTGTGGTTAATATGGCCGGGAAGGACTATGTACACCTCAGGCCTGCCAGCTGGTCTTCCATCCCGCGGTaGCCCATGGCGCCGGCGGCC +
Preference number: 5 (lower is better)
Translates to: CVVNMAGKDYVHLRPASWSSIPR*PMAPAA
Trigger: GGCCGCCGGCGCCATGGGCAACCGCGGGATGGAAGA...CCAGCTGGCAGGCCTGAGGTGTACATAGTCCTTCCCGGCCATATTAACCACACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp ATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCACGGATGTCCTTCTaGCCCTCAATATCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: IGQGRPGPTAPGLAKAPLARMSF*PSISFW
Trigger: CCAGAAGGATATTGAGGGCAAGAAGGACATCCGTGC...CAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTGCACGGATGTCCTTCTaGCCCTCAATATCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPARMSF*PSISFW
Trigger: CCAGAAGGATATTGAGGGCAAGAAGGACATCCGTGC...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CAA 90 bp TGGGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCTCACGGATCTTGAGGTaGTCCAGAGGCAGCATGTAC +
Preference number: 5 (lower is better)
Translates to: WEPGPSIGAAEGPRPLKLSRILR*SRGSMY
Trigger: GTACATGCTGCCTCTGGACAACCTCAAGATCCGTGA...GAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CAA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTTCACGGATCTTGAGGTaGTCCAGAGGCAGCATGTAC +
Preference number: 5 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPSRILR*SRGSMY
Trigger: GTACATGCTGCCTCTGGACAACCTCAAGATCCGTGA...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CAA 90 bp AATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGCGAAGACGTGCTTGTaGGACATGAAGCCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: NRARPARANGSGPSKGTSAKTCL*DMKPFS
Trigger: GGAGAAGGGCTTCATGTCCAACAAGCACGTCTTCGC...AGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTATT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTTTTCTCTGCTCCGTGTaGAAGATGGCGAAGACGTGC +
Preference number: 5 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPFLCSV*KMAKTC
Trigger: GCACGTCTTCGCCATCTTCAACACGGAGCAGAGAAA...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CAA 90 bp TGGGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCTCGCGGATGGACTTGTaGATGATGGCCACGTATGAG +
Preference number: 5 (lower is better)
Translates to: WEPGPSIGAAEGPRPLKLSRMDL*MMATYE
Trigger: CTCATACGTGGCCATCATCAACAAGTCCATCCGCGA...GAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CAA 90 bp ATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGAGGTCGCGGATGGACTaGTTGATGATGGCCACGTAT +
Preference number: 5 (lower is better)
Translates to: IGQGRPGPTAPGLAKAPLRSRMD*LMMATY
Trigger: ATACGTGGCCATCATCAACAAGTCCATCCGCGACCT...CAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTAGGTCGCGGATGGACTaGTTGATGATGGCCACGTAT +
Preference number: 5 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPRSRMD*LMMATY
Trigger: ATACGTGGCCATCATCAACAAGTCCATCCGCGACCT...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS TCA 90 bp GATGGGAACCACAGATGGGAGACCCAGAGGCCACGGCCACGCTCATaGCGGGGCTGGGCTATGTGGCCTCTGGTAGGAAAAGAGGAACCC +
Preference number: 5 (lower is better)
Translates to: DGNHRWETQRPRPRS*RGWAMWPLVGKEEP
Trigger: GGGTTCCTCTTTTCCTACCAGAGGCCACATAGCCCAGCCCCGTCATGAGCGTGGCCGTGGCCTCTGGGTCTCCCATCTGTGGTTCCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS TCA 90 bp GCGCAGCATCCAGATGCTCACGCTACTGCGGGCCTTCGAGGCACGTaGCCGCAACCTGCAAGAGGGCAACTTGGAGCGGGTCAACTTCTG +
Preference number: 5 (lower is better)
Translates to: AQHPDAHATAGLRGT*PQPARGQLGAGQLL
Trigger: CAGAAGTTGACCCGCTCCAAGTTGCCCTCTTGCAGGTTGCGGTCACGTGCCTCGAAGGCCCGCAGTAGCGTGAGCATCTGGATGCTGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591818.1
ENST00000593203.1
CDS TCA 90 bp GCGGGGCAGGGCCTAACAAGGAAACCTGGGCCCTCCAAGCCAGGTTaGGGTCTGGTAACAGAATGCCAGGAAGGGGGCCTGGAAGACCAC +
Preference number: 5 (lower is better)
Translates to: AGQGLTRKPGPSKPG*GLVTECQEGGLEDH
Trigger: GTGGTCTTCCAGGCCCCCTTCCTGGCATTCTGTTACCAGACCTCAACCTGGCTTGGAGGGCCCAGGTTTCCTTGTTAGGCCCTGCCCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593203.1
CDS TCA 90 bp CAGCGGGTGATGCCTGAGACCACGCACACTGAATCGACATCCTGCTaGAATCAGGGCTCCCCGATGTGGGCCCTCATCTGGGTGCCACGG +
Preference number: 5 (lower is better)
Translates to: QRVMPETTHTESTSC*NQGSPMWALIWVPR
Trigger: CCGTGGCACCCAGATGAGGGCCCACATCGGGGAGCCCTGATTTCAGCAGGATGTCGATTCAGTGTGCGTGGTCTCAGGCATCACCCGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682285.1
ENST00000683738.1
CDS GCA 90 bp ACTTCTGGTCAGCTGTCAACGTGGCGGTGCTGCTGCTGGTGGCTGTaGTGCAGGTCTGCACGCTCAAGCGCTTCTTCCAGGACAAGCGCC +
Preference number: 5 (lower is better)
Translates to: TSGQLSTWRCCCWWL*CRSARSSASSRTSA
Trigger: GGCGCTTGTCCTGGAAGAAGCGCTTGAGCGTGCAGACCTGCAGCACAGCCACCAGCAGCAGCACCGCCACGTTGACAGCTGACCAGAAGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591818.1
ENST00000593203.1
CDS GCA 90 bp TGGAGCGGGTCAACTTCTGGTCAGCTGTCAACGTGGCGGTGCTGCTaGTGGTGGCTGTGCTGCAGGTCTGCACGCTCAAGCGCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: WSGSTSGQLSTWRCC*WWLCCRSARSSASS
Trigger: GGAAGAAGCGCTTGAGCGTGCAGACCTGCAGCACAGCCACCAGCAGCAGCACCGCCACGTTGACAGCTGACCAGAAGTTGACCCGCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591818.1
ENST00000593203.1
CDS GCA 90 bp TGCAGGTCTGCACGCTCAAGCGCTTCTTCCAGGACAAGCGCCCGGTaGCCACGTAGCCCCTGCCATGGAAGGAAGAACGGGACAAAGGAG +
Preference number: 5 (lower is better)
Translates to: CRSARSSASSRTSAR*PRSPCHGRKNGTKE
Trigger: CTCCTTTGTCCCGTTCTTCCTTCCATGGCAGGGGCTACGTGGGCACCGGGCGCTTGTCCTGGAAGAAGCGCTTGAGCGTGCAGACCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593203.1
CDS CCA 90 bp AAGAGCCGGGCTGAGGCCGGCTGCCTAGAGGTGAGCTCCTTGAGCTaGGTTCAGTTCTCAGCTATGAGTAGCAGGCTGCTTCCCGCTGGG +
Preference number: 5 (lower is better)
Translates to: KSRAEAGCLEVSSLS*VQFSAMSSRLLPAG
Trigger: CCCAGCGGGAAGCAGCCTGCTACTCATAGCTGAGAACTGAACCCAGCTCAAGGAGCTCACCTCTAGGCAGCCGGCCTCAGCCCGGCTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS CCA 90 bp CCATGGCCCTATCTGCACACCCAGGCCCTGGGAGCAGCGAGGCCCTaGCATAGGATCGGCTCAGCTACAAGAAAGACCCTGGGATTGCCA +
Preference number: 5 (lower is better)
Translates to: PWPYLHTQALGAARP*HRIGSATRKTLGLP
Trigger: TGGCAATCCCAGGGTCTTTCTTGTAGCTGAGCCGATCCTATGCCAGGGCCTCGCTGCTCCCAGGGCCTGGGTGTGCAGATAGGGCCATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS CCA 90 bp ATTCTGAACCAGGGCCACCAGCCCACAGCTCCAGCGGCTCCTTGGTaGCTGGATGTGAGTGCTAAGCCCCAGGTGGCCATGAAGACGGAG +
Preference number: 5 (lower is better)
Translates to: ILNQGHQPTAPAAPW*LDVSAKPQVAMKTE
Trigger: CTCCGTCTTCATGGCCACCTGGGGCTTAGCACTCACATCCAGCCACCAAGGAGCCGCTGGAGCTGTGGGCTGGTGGCCCTGGTTCAGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS CCA 90 bp CGGTTCCCTGCATGTGGTCTTCCTCTGAGGGTGGGGAGCTGGGTGTaGGTTTGCCCACTGCTCTATCACAGGGCCCAGCGAGAGGGCATA +
Preference number: 5 (lower is better)
Translates to: RFPACGLPLRVGSWV*VCPLLYHRAQREGI
Trigger: TATGCCCTCTCGCTGGGCCCTGTGATAGAGCAGTGGGCAAACCCACACCCAGCTCCCCACCCTCAGAGGAAGACCACATGCAGGGAACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682285.1
ENST00000683738.1
CDS-3UTR CAA 90 bp AATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGCACGGATGTCCTTCTaGCCCTCAATATCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: NRARPARANGSGPSKGTSARMSF*PSISFW
Trigger: CCAGAAGGATATTGAGGGCAAGAAGGACATCCGTGC...AGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp AATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTTTTCTCTGCTCCGTGTaGAAGATGGCGAAGACGTGC +
Preference number: 5 (lower is better)
Translates to: NRARPARANGSGPSKGTSFLCSV*KMAKTC
Trigger: GCACGTCTTCGCCATCTTCAACACGGAGCAGAGAAA...AGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp GCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGGCAGCAAGGCCTTCGTATTGTaGATCATGAGGTGCATGATG +
Preference number: 5 (lower is better)
Translates to: ARPARANGSGPSKGTSGSKAFVL*IMRCMM
Trigger: CATCATGCACCTCATGATCAACAATACGAAGGCCTT...GCTGCCAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp TTTCCTCGCAAGCCAAATAGGGATGAGGACGATTCCTCCACTCCAGCAGCTGGGCAGGCCGGGATGGGATaGGGGGCGCCGAGAAGGAGG +
Preference number: 5 (lower is better)
Translates to: FPRKPNRDEDDSSTPAAGQAGMG*GAPRRR
Trigger: CCTCCTTCTCGGCGCCCCCAATCCCATCCCGGCCTG...CCCAGCTGCTGGAGTGGAGGAATCGTCCTCATCCCTATTTGGCTTGCGAGGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589106.1
CDS TCA 90 bp TGCAGAAGTGCGCCTTCAAGGGTGGCGGTCCAGTTAGTGCCTGTGTaGGTCGACTTATACCCAGGGCAACGTGCAGTCCAGCGCCGGCTG +
Preference number: 5 (lower is better)
Translates to: CRSAPSRVAVQLVPV*VDLYPGQRAVQRRL
Trigger: CAGCCGGCGCTGGACTGCACGTTGCCCTGGGTATAAGTCGACTCACACAGGCACTAACTGGACCGCCACCCTTGAAGGCGCACTTCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590806.5
CDS GCA 90 bp GGTCCAGTTAGTGCCTGTGTGAGTCGACTTATACCCAGGGCAACGTaGAGTCCAGCGCCGGCTGCGGCATGGGGTTTCCAGGTTAGCTCG +
Preference number: 5 (lower is better)
Translates to: GPVSACVSRLIPRAT*SPAPAAAWGFQVSS
Trigger: CGAGCTAACCTGGAAACCCCATGCCGCAGCCGGCGCTGGACTGCACGTTGCCCTGGGTATAAGTCGACTCACACAGGCACTAACTGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590806.5
CDS GCA 90 bp GCCCAGGCTGTGCTGTCCAAGTGTAAGAGCCGGGCTGAGGCCGGCTaGCTAGAGGTGAGCTCCTTGAGCTGGGTTCAGTTCTCAGCTATG +
Preference number: 5 (lower is better)
Translates to: AQAVLSKCKSRAEAG*LEVSSLSWVQFSAM
Trigger: CATAGCTGAGAACTGAACCCAGCTCAAGGAGCTCACCTCTAGGCAGCCGGCCTCAGCCCGGCTCTTACACTTGGACAGCACAGCCTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS GCA 90 bp ACTTGGAGCGGGTCAACTTCTGGTCAGCTGTCAACGTGGCGGTGCTaGTGCTGGTGGCTGTGCTGCAGGTCTGCACGCTCAAGCGCTTCT +
Preference number: 5 (lower is better)
Translates to: TWSGSTSGQLSTWRC*CWWLCCRSARSSAS
Trigger: AGAAGCGCTTGAGCGTGCAGACCTGCAGCACAGCCACCAGCAGCAGCACCGCCACGTTGACAGCTGACCAGAAGTTGACCCGCTCCAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591818.1
ENST00000593203.1
CDS GCA 90 bp GGGTCCCCAACAAGGAATGAAGGTTGTGTCATGTGTGGGGTCGGATaGCTGAGTCCACTGCCCGGAAACCCTCAGGGTGACCCGAGGACC +
Preference number: 5 (lower is better)
Translates to: GSPTRNEGCVMCGVG*LSPLPGNPQGDPRT
Trigger: GGTCCTCGGGTCACCCTGAGGGTTTCCGGGCAGTGGACTCAGGCATCCGACCCCACACATGACACAACCTTCATTCCTTGTTGGGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593220.1
CDS GCA 90 bp ATGTGCCTTAGCCTAAGCCTCCCATCCTGTGTTAGCGTTGCCTGGTaGGGGGCAGGGCCTAACAAGGAAACCTGGGCCCTCCAAGCCAGG +
Preference number: 5 (lower is better)
Translates to: MCLSLSLPSCVSVAW*GAGPNKETWALQAR
Trigger: CCTGGCTTGGAGGGCCCAGGTTTCCTTGTTAGGCCCTGCCCCGCACCAGGCAACGCTAACACAGGATGGGAGGCTTAGGCTAAGGCACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593203.1
CDS CCA 90 bp GGGTCAACTTCTGGTCAGCTGTCAACGTGGCGGTGCTGCTGCTGGTaGCTGTGCTGCAGGTCTGCACGCTCAAGCGCTTCTTCCAGGACA +
Preference number: 5 (lower is better)
Translates to: GSTSGQLSTWRCCCW*LCCRSARSSASSRT
Trigger: TGTCCTGGAAGAAGCGCTTGAGCGTGCAGACCTGCAGCACAGCCACCAGCAGCAGCACCGCCACGTTGACAGCTGACCAGAAGTTGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591818.1
ENST00000593203.1
CDS CCA 90 bp AAGAGGGCAACTTGGAGCGGGTCAACTTCTGGTCAGCTGTCAACGTaGCGGTGCTGCTGCTGGTGGCTGTGCTGCAGGTCTGCACGCTCA +
Preference number: 5 (lower is better)
Translates to: KRATWSGSTSGQLST*RCCCWWLCCRSARS
Trigger: TGAGCGTGCAGACCTGCAGCACAGCCACCAGCAGCAGCACCGCCACGTTGACAGCTGACCAGAAGTTGACCCGCTCCAAGTTGCCCTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591818.1
ENST00000593203.1
CDS CCA 90 bp AAGGGACGGCTCAGTGGCTGCACCGACGGTCCTGGAAATCTCACATaGTGGGCACTGCAGCGTTGGAACGTGAGCCTCGGATTTCCTGGC +
Preference number: 5 (lower is better)
Translates to: KGRLSGCTDGPGNLT*WALQRWNVSLGFPG
Trigger: GCCAGGAAATCCGAGGCTCACGTTCCAACGCTGCAGTGCCCACCATGTGAGATTTCCAGGACCGTCGGTGCAGCCACTGAGCCGTCCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593203.1
CDS CCA 90 bp TCAGCGGGCAGGGAACACCTCTGGCTTGTAGAAGGGACGGCTCAGTaGCTGCACCGACGGTCCTGGAAATCTCACATGGTGGGCACTGCA +
Preference number: 5 (lower is better)
Translates to: SAGREHLWLVEGTAQ*LHRRSWKSHMVGTA
Trigger: TGCAGTGCCCACCATGTGAGATTTCCAGGACCGTCGGTGCAGCCACTGAGCCGTCCCTTCTACAAGCCAGAGGTGTTCCCTGCCCGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593203.1
CDS CCA 90 bp TTAGTTTCCTGCCAAAACGGGAGTGTGCAGTCAGGGCCTGCGGTCTaGCCCCATGAGTCTCCTTCCGTCCTCAGCGGGCAGGGAACACCT +
Preference number: 5 (lower is better)
Translates to: LVSCQNGSVQSGPAV*PHESPSVLSGQGTP
Trigger: AGGTGTTCCCTGCCCGCTGAGGACGGAAGGAGACTCATGGGGCCAGACCGCAGGCCCTGACTGCACACTCCCGTTTTGGCAGGAAACTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593203.1
CDS-3UTR CAA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTTGCAGGATCATGTCCTaGATCTGGTACTCGATGTCT +
Preference number: 5 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPCRIMS*IWYSMS
Trigger: AGACATCGAGTACCAGATCAAGGACATGATCCTGCA...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CAA 90 bp TGGGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCTGCAGGATCATGTCCTaGATCTGGTACTCGATGTCT +
Preference number: 5 (lower is better)
Translates to: WEPGPSIGAAEGPRPLKLCRIMS*IWYSMS
Trigger: AGACATCGAGTACCAGATCAAGGACATGATCCTGCA...GAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS-3UTR CAA 90 bp GGGGATGTAGGCGCCCTTGGTGCCCGCACTTATAGAAGGCCTGCCCTACATGGGCTCCTCTGCTGGGCATaGGCAAACCCGATGAAGTCC +
Preference number: 5 (lower is better)
Translates to: GDVGALGARTYRRPALHGLLCWA*ANPMKS
Trigger: GGACTTCATCGGGTTTGCCAATGCCCAGCAGAGGAG...CCCATGTAGGGCAGGCCTTCTATAAGTGCGGGCACCAAGGGCGCCTACATCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp CTGGAGCTCCAGGGCCCCTTTGCGCAGTGCGGTGTCCAGCCAGGCACAGGGGCCAAGGCCTTCGTATTGTaGATCATGAGGTGCATGATG +
Preference number: 5 (lower is better)
Translates to: LELQGPFAQCGVQPGTGAKAFVL*IMRCMM
Trigger: CATCATGCACCTCATGATCAACAATACGAAGGCCTT...GGCCCCTGTGCCTGGCTGGACACCGCACTGCGCAAAGGGGCCCTGGAGCTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS TCA 90 bp ACCCAACCCAGGCTTCACCTGGTCATGCTGAGGGGTCACCGTGAGTaGCGCCTACACAGAAGAGCGCTGTGCACAAGCTCGGCAAGTGTC +
Preference number: 5 (lower is better)
Translates to: TQPRLHLVMLRGHRE*RLHRRALCTSSASV
Trigger: GACACTTGCCGAGCTTGTGCACAGCGCTCTTCTGTGTAGGCGTCACTCACGGTGACCCCTCAGCATGACCAGGTGAAGCCTGGGTTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593203.1
CDS TCA 90 bp CCAAACCCAACCCAGGCTTCACCTGGTCATGCTGAGGGGTCACCGTaGGTGACGCCTACACAGAAGAGCGCTGTGCACAAGCTCGGCAAG +
Preference number: 5 (lower is better)
Translates to: PNPTQASPGHAEGSP*VTPTQKSAVHKLGK
Trigger: CTTGCCGAGCTTGTGCACAGCGCTCTTCTGTGTAGGCGTCACTCACGGTGACCCCTCAGCATGACCAGGTGAAGCCTGGGTTGGGTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593203.1
CDS GCA 90 bp GCCAACCTCCACAGTGATGGCTGGGTGACAGTGAGGTTCCAGAGGTaGTATTTCCTAAGGGCCTCCTGGCTCCCATCCTTGCCAGGGCTC +
Preference number: 5 (lower is better)
Translates to: ANLHSDGWVTVRFQR*YFLRASWLPSLPGL
Trigger: GAGCCCTGGCAAGGATGGGAGCCAGGAGGCCCTTAGGAAATAGCACCTCTGGAACCTCACTGTCACCCAGCCATCACTGTGGAGGTTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683738.1
CDS CCA 90 bp TGCTCACGCTGCCTCCCTGGAGATCAGCTAAGGCCCAGCACCAAGTaGGCACCTACTTGGAGCAATAAGAGATTGGAGCCTGGTCGGGCG +
Preference number: 5 (lower is better)
Translates to: CSRCLPGDQLRPSTK*APTWSNKRLEPGRA
Trigger: CGCCCGACCAGGCTCCAATCTCTTATTGCTCCAAGTAGGTGCCCACTTGGTGCTGGGCCTTAGCTGATCTCCAGGGAGGCAGCGTGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591266.1
CDS CCA 90 bp CTCTGGCTTGTAGAAGGGACGGCTCAGTGGCTGCACCGACGGTCCTaGAAATCTCACATGGTGGGCACTGCAGCGTTGGAACGTGAGCCT +
Preference number: 5 (lower is better)
Translates to: LWLVEGTAQWLHRRS*KSHMVGTAALEREP
Trigger: AGGCTCACGTTCCAACGCTGCAGTGCCCACCATGTGAGATTTCCAGGACCGTCGGTGCAGCCACTGAGCCGTCCCTTCTACAAGCCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593203.1
CDS-3UTR CAA 90 bp AATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTTGCAGGATCATGTCCTaGATCTGGTACTCGATGTCT +
Preference number: 5 (lower is better)
Translates to: NRARPARANGSGPSKGTSCRIMS*IWYSMS
Trigger: AGACATCGAGTACCAGATCAAGGACATGATCCTGCA...AGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp AGGCTGGGCCAGGCTCAGGCTGTGTGGTTAATATGGCCGGGAAGGACTATGTACTTGGCCAGGTCCATGTaGGCGGGCGTGACAGCCAGA +
Preference number: 5 (lower is better)
Translates to: RLGQAQAVWLIWPGRTMYLARSM*AGVTAR
Trigger: TCTGGCTGTCACGCCCGCCAACATGGACCTGGCCAA...GTACATAGTCCTTCCCGGCCATATTAACCACACAGCCTGAGCCTGGCCCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp ACTTACAGTGGTCAAACTGAGCGAGGAGTGGGTGAGGTCTCCTCAGAGAGAGGCAGCAGGGCTTTGGTTTaGCGGGTGGGGTCGTCGGGC +
Preference number: 5 (lower is better)
Translates to: TYSGQTERGVGEVSSERGSRALV*RVGSSG
Trigger: GCCCGACGACCCCACCCGCAAAACCAAAGCCCTGCT...GCCTCTCTCTGAGGAGACCTCACCCACTCCTCGCTCAGTTTGACCACTGTAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp GGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCCTCACTGCCTAACTGTATaGATTAGCTCCTGGATAACC +
Preference number: 5 (lower is better)
Translates to: GAWSQHRGGGGPQTTEAPHCLTV*ISSWIT
Trigger: GGTTATCCAGGAGCTAATCAATACAGTTAGGCAGTG...AGGAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355667.11
ENST00000359692.10
CDS-3UTR CAA 90 bp ATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGCACTGCCTAACTGTATaGATTAGCTCCTGGATAACC +
Preference number: 5 (lower is better)
Translates to: IGQGRPGPTAPGLAKAPLHCLTV*ISSWIT
Trigger: GGTTATCCAGGAGCTAATCAATACAGTTAGGCAGTG...CAGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355667.11
ENST00000359692.10
CDS-3UTR CAA 90 bp TGGGAGCCTGGTCCCAGCATAGGGGCGGCGGAGGGCCCCAGACCACTGAAGCTCATGAAGGCCTTCGTATaGTTGATCATGAGGTGCATG +
Preference number: 5 (lower is better)
Translates to: WEPGPSIGAAEGPRPLKLMKAFV*LIMRCM
Trigger: CATGCACCTCATGATCAACAATACGAAGGCCTTCAT...GAGCTTCAGTGGTCTGGGGCCCTCCGCCGCCCCTATGCTGGGACCAGGCTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
CDS TCA 90 bp AGGGAAAACAGGGAGACAGGCTGTCGGTGCTCCCCCAGAGAAATGTaGGGCCTCCATACTCCTAGGCCTGGCCCGGTTTCTAAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: RENRETGCRCSPREM*GLHTPRPGPVSKER
Trigger: CCTCTCCTTAGAAACCGGGCCAGGCCTAGGAGTATGGAGGCCTCACATTTCTCTGGGGGAGCACCGACAGCCTGTCTCCCTGTTTTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS TCA 90 bp CTTGGTCATTGCTGTGTCCCCAAGGGCACACTCACGCATGTTAGGTaGGAAATGGAGGTTCTGCCTGCCCGGCTGCCACAGGCTTCCCCA +
Preference number: 5 (lower is better)
Translates to: LGHCCVPKGTLTHVR*EMEVLPARLPQASP
Trigger: TGGGGAAGCCTGTGGCAGCCGGGCAGGCAGAACCTCCATTTCTCACCTAACATGCGTGAGTGTGCCCTTGGGGACACAGCAATGACCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587991.5
CDS TCA 90 bp TCAGTTGGCTCTGCCTTCACCCCAGGACCCCCGACAGAGACTGTCTaGCACCTGCCCTCTCAGAGAATCCCAACTCAGTCACCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: SVGSAFTPGPPTETV*HLPSQRIPTQSPPW
Trigger: CCAAGGAGGTGACTGAGTTGGGATTCTCTGAGAGGGCAGGTGTCAGACAGTCTCTGTCGGGGGTCCTGGGGTGAAGGCAGAGCCAACTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587329.1
ENST00000682285.1
ENST00000683738.1
CDS GCA 90 bp GCGGGCGTGACAGCCAGAATGAGGCTGCTCTCCCGGCTGATGAACTaGAGGATCATGTCCTTGATCTGGTACTCGATGTCTGGAGGCTGG +
Preference number: 5 (lower is better)
Translates to: AGVTARMRLLSRLMN*RIMSLIWYSMSGGW
Trigger: CCAGCCTCCAGACATCGAGTACCAGATCAAGGACATGATCCTGCAGTTCATCAGCCGGGAGAGCAGCCTCATTCTGGCTGTCACGCCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
ENST00000585892.5
ENST00000586939.5
ENST00000591819.1
ENST00000682285.1
ENST00000682524.1
ENST00000683738.1
CDS GCA 90 bp GGGAAGGAGGGGCACAAGCTTGACCCTGCCATGGGTCTGGCAGACTaGCGAGAGGAATGGGCTCTAGGGGTCTTTCTGACTGATCAGGAA +
Preference number: 5 (lower is better)
Translates to: GKEGHKLDPAMGLAD*REEWALGVFLTDQE
Trigger: TTCCTGATCAGTCAGAAAGACCCCTAGAGCCCATTCCTCTCGGCAGTCTGCCAGACCCATGGCAGGGTCAAGCTTGTGCCCCTCCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593203.1
CDS CCA 90 bp TGGGCATGTGACCCTCGACACCAACTGTGGCTGGGAAGCTCCCACTaGGGCATTTTCAGGAAAGCCCAGAGCAGCACTGTCCACCAGAAC +
Preference number: 5 (lower is better)
Translates to: WACDPRHQLWLGSSH*GIFRKAQSSTVHQN
Trigger: GTTCTGGTGGACAGTGCTGCTCTGGGCTTTCCTGAAAATGCCCCAGTGGGAGCTTCCCAGCCACAGTTGGTGTCGAGGGTCACATGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593203.1
CDS CCA 90 bp TCTGTTGGATCAGCTGACTCTTCTCTTTTCCTGGGCCCCCAGAGGTaGGCATGTGACCCTCGACACCAACTGTGGCTGGGAAGCTCCCAC +
Preference number: 5 (lower is better)
Translates to: SVGSADSSLFLGPQR*ACDPRHQLWLGSSH
Trigger: GTGGGAGCTTCCCAGCCACAGTTGGTGTCGAGGGTCACATGCCCACCTCTGGGGGCCCAGGAAAAGAGAAGAGTCAGCTGATCCAACAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593203.1
CDS CCA 90 bp TGTGTTAGCGTTGCCTGGTGCGGGGCAGGGCCTAACAAGGAAACCTaGGCCCTCCAAGCCAGGTTGAGGTCTGGTAACAGAATGCCAGGA +
Preference number: 5 (lower is better)
Translates to: CVSVAWCGAGPNKET*ALQARLRSGNRMPG
Trigger: TCCTGGCATTCTGTTACCAGACCTCAACCTGGCTTGGAGGGCCCAGGTTTCCTTGTTAGGCCCTGCCCCGCACCAGGCAACGCTAACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593203.1
CDS-3UTR CAA 90 bp ACTTACAGTGGTCAAACTGAGCGAGGAGTGGGTGAGGTCTCCTCAGAGAGAGGCACTTCCTTGGCCAGCTaGAGGGCGTCGGAGTTGGCC +
Preference number: 5 (lower is better)
Translates to: TYSGQTERGVGEVSSERGTSLAS*RASELA
Trigger: GGCCAACTCCGACGCCCTCAAGCTGGCCAAGGAAGT...GCCTCTCTCTGAGGAGACCTCACCCACTCCTCGCTCAGTTTGACCACTGTAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp GGGGATGTAGGCGCCCTTGGTGCCCGCACTTATAGAAGGCCTGCCCTACATGGGGCACGGATGTCCTTCTaGCCCTCAATATCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: GDVGALGARTYRRPALHGARMSF*PSISFW
Trigger: CCAGAAGGATATTGAGGGCAAGAAGGACATCCGTGC...CCCATGTAGGGCAGGCCTTCTATAAGTGCGGGCACCAAGGGCGCCTACATCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp GGGGATGTAGGCGCCCTTGGTGCCCGCACTTATAGAAGGCCTGCCCTACATGGGTTCATCAGGCTGATGTaGTTGATGGTCAGCCAGCCC +
Preference number: 5 (lower is better)
Translates to: GDVGALGARTYRRPALHGFIRLM*LMVSQP
Trigger: GGGCTGGCTGACCATCAACAACATCAGCCTGATGAA...CCCATGTAGGGCAGGCCTTCTATAAGTGCGGGCACCAAGGGCGCCTACATCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp GGGGATGTAGGCGCCCTTGGTGCCCGCACTTATAGAAGGCCTGCCCTACATGGGTCACGGATCTTGAGGTaGTCCAGAGGCAGCATGTAC +
Preference number: 5 (lower is better)
Translates to: GDVGALGARTYRRPALHGSRILR*SRGSMY
Trigger: GTACATGCTGCCTCTGGACAACCTCAAGATCCGTGA...CCCATGTAGGGCAGGCCTTCTATAAGTGCGGGCACCAAGGGCGCCTACATCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp AATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTATGAAGGCCTTCGTATaGTTGATCATGAGGTGCATG +
Preference number: 5 (lower is better)
Translates to: NRARPARANGSGPSKGTSMKAFV*LIMRCM
Trigger: CATGCACCTCATGATCAACAATACGAAGGCCTTCAT...AGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS TCA 90 bp AGACAAATGCAGCATCTCAGAAACCATGCGGCGCTGGCTAGACACTaGATCACCAGCAGCGGCGGTGACAGCACGTGCCCCTCACAACAG +
Preference number: 5 (lower is better)
Translates to: RQMQHLRNHAALARH*ITSSGGDSTCPSQQ
Trigger: CTGTTGTGAGGGGCACGTGCTGTCACCGCCGCTGCTGGTGATTCAGTGTCTAGCCAGCGCCGCATGGTTTCTGAGATGCTGCATTTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588976.1
CDS TCA 90 bp ATCTTGGCCTCTTCCTCATCAGAGCCAGCTCACTTTGGATTGTATTaGTGGGGCCAGGACCTGCGGCTCCAGCACCCCAGAGCCCAGCAT +
Preference number: 5 (lower is better)
Translates to: ILASSSSEPAHFGLY*WGQDLRLQHPRAQH
Trigger: ATGCTGGGCTCTGGGGTGCTGGAGCCGCAGGTCCTGGCCCCATCAATACAATCCAAAGTGAGCTGGCTCTGATGAGGAAGAGGCCAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591819.1
CDS GCA 90 bp CACTCACGCATGTTAGGTGAGAAATGGAGGTTCTGCCTGCCCGGCTaGCACAGGCTTCCCCAGCAAGCTGAATCTAGGTGTCTGAGCTGC +
Preference number: 5 (lower is better)
Translates to: HSRMLGEKWRFCLPG*HRLPQQAESRCLSC
Trigger: GCAGCTCAGACACCTAGATTCAGCTTGCTGGGGAAGCCTGTGGCAGCCGGGCAGGCAGAACCTCCATTTCTCACCTAACATGCGTGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587991.5
CDS GCA 90 bp ACCACTATCAGCCCAGGAGAGCTTCCAGATATTCTCAGTTGGCTCTaGCTTCACCCCAGGACCCCCGACAGAGACTGTCTGACACCTGCC +
Preference number: 5 (lower is better)
Translates to: TTISPGELPDILSWL*LHPRTPDRDCLTPA
Trigger: GGCAGGTGTCAGACAGTCTCTGTCGGGGGTCCTGGGGTGAAGGCAGAGCCAACTGAGAATATCTGGAAGCTCTCCTGGGCTGATAGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587329.1
ENST00000682285.1
ENST00000683738.1
CDS GCA 90 bp CAGCCACAGGTAGAGGCAGAGAGAAGCCCCCTGCACACACAGAGCTaGGCAAGGGAAACGGCCTGGGCACACGGAACAAGTAAATGTATC +
Preference number: 5 (lower is better)
Translates to: QPQVEAERSPLHTQS*ARETAWAHGTSKCI
Trigger: GATACATTTACTTGTTCCGTGTGCCCAGGCCGTTTCCCTTGCGCAGCTCTGTGTGTGCAGGGGGCTTCTCTCTGCCTCTACCTGTGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681972.1
CDS CCA 90 bp TTGCCATCCCTGACCTACAGGAAACCAGGAAAACCTGCCAGGAACTaGCTGCAGAAGTGCGCCTTCAAGGGTGGCGGTCCAGTTAGTGCC +
Preference number: 5 (lower is better)
Translates to: LPSLTYRKPGKPARN*LQKCAFKGGGPVSA
Trigger: GGCACTAACTGGACCGCCACCCTTGAAGGCGCACTTCTGCAGCCAGTTCCTGGCAGGTTTTCCTGGTTTCCTGTAGGTCAGGGATGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590806.5
CDS CCA 90 bp TGGGTGACAGTGAGGTTCCAGAGGTGCTATTTCCTAAGGGCCTCCTaGCTCCCATCCTTGCCAGGGCTCCCTCAAATAGCAGCCCACAAG +
Preference number: 5 (lower is better)
Translates to: WVTVRFQRCYFLRAS*LPSLPGLPQIAAHK
Trigger: CTTGTGGGCTGCTATTTGAGGGAGCCCTGGCAAGGATGGGAGCCAGGAGGCCCTTAGGAAATAGCACCTCTGGAACCTCACTGTCACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683738.1
CDS-3UTR CAA 90 bp AATAGGGCAAGGCCGGCCCGGGCCAACGGCTCCGGGCCTAGCAAAGGCACCTCTGTAAACTTTTTGGACTaGCAGTGCAAAAACTCGGCA +
Preference number: 5 (lower is better)
Translates to: NRARPARANGSGPSKGTSVNFLD*QCKNSA
Trigger: TGCCGAGTTTTTGCACTGCAAGTCCAAAAAGTTTAC...AGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp TGTGTGGTTAATATGGCCGGGAAGGACTATGTACACCTCAGGCCTGCCAGCTGGACTGGGGAGATGCCTTaGTTGGTCCCCGTGACCCTG +
Preference number: 5 (lower is better)
Translates to: CVVNMAGKDYVHLRPASWTGEMP*LVPVTL
Trigger: CAGGGTCACGGGGACCAACAAAGGCATCTCCCCAGT...CCAGCTGGCAGGCCTGAGGTGTACATAGTCCTTCCCGGCCATATTAACCACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp GGGGATGTAGGCGCCCTTGGTGCCCGCACTTATAGAAGGCCTGCCCTACATGGGGATGTGGTTGGTCAGTaGCTGATTCAGCGTCTTCTG +
Preference number: 5 (lower is better)
Translates to: GDVGALGARTYRRPALHGDVVGQ*LIQRLL
Trigger: CAGAAGACGCTGAATCAGCAACTGACCAACCACATC...CCCATGTAGGGCAGGCCTTCTATAAGTGCGGGCACCAAGGGCGCCTACATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp TTCCTCGCAAGCCAAATAGGGATGAGGACGATTCCTCCACTCCAGCAGCTGGGCGGGAAGAGGTCACTGTaGGCAAACACGCTCTGGGGT +
Preference number: 5 (lower is better)
Translates to: FLASQIGMRTIPPLQQLGGKRSL*ANTLWG
Trigger: ACCCCAGAGCGTGTTTGCCAACAGTGACCTCTTCCC...GCCCAGCTGCTGGAGTGGAGGAATCGTCCTCATCCCTATTTGGCTTGCGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589106.1
CDS TCA 90 bp ATGGTCAGCAATTTCATTGGCCCTGGCCGGGTCCCCAACAAGGAATaGAGGTTGTGTCATGTGTGGGGTCGGATGCCTGAGTCCACTGCC +
Preference number: 5 (lower is better)
Translates to: MVSNFIGPGRVPNKE*RLCHVWGRMPESTA
Trigger: GGCAGTGGACTCAGGCATCCGACCCCACACATGACACAACCTTCATTCCTTGTTGGGGACCCGGCCAGGGCCAATGAAATTGCTGACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593220.1
CDS CCA 90 bp TTCTCGTCAAACTCCATCTTCACCAGCTCAAATGGGAACCGCTCGTaGAAGATGCGATTGATTCGGGCGCCCCCGGAGAGCTCCAGAGTG +
Preference number: 5 (lower is better)
Translates to: FSSNSIFTSSNGNRS*KMRLIRAPPESSRV
Trigger: CACTCTGGAGCTCTCCGGGGGCGCCCGAATCAATCGCATCTTCCACGAGCGGTTCCCATTTGAGCTGGTGAAGATGGAGTTTGACGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
ENST00000585892.5
ENST00000587830.2
ENST00000591701.5
ENST00000682285.1
ENST00000683738.1
CDS CCA 90 bp GGGAGAAGCAGGTTCCTGGTCTTGGCCTGGCAAATTCAAAGGGACTaGGGGGAACACATGAGGAACCTGAAAACCACAAGCCCGAGGCCA +
Preference number: 5 (lower is better)
Translates to: GRSRFLVLAWQIQRD*GEHMRNLKTTSPRP
Trigger: TGGCCTCGGGCTTGTGGTTTTCAGGTTCCTCATGTGTTCCCCCCAGTCCCTTTGAATTTGCCAGGCCAAGACCAGGAACCTGCTTCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS CCA 90 bp CACAAGCTTGACCCTGCCATGGGTCTGGCAGACTGCCGAGAGGAATaGGCTCTAGGGGTCTTTCTGACTGATCAGGAACCCAAACCCAAC +
Preference number: 5 (lower is better)
Translates to: HKLDPAMGLADCREE*ALGVFLTDQEPKPN
Trigger: GTTGGGTTTGGGTTCCTGATCAGTCAGAAAGACCCCTAGAGCCCATTCCTCTCGGCAGTCTGCCAGACCCATGGCAGGGTCAAGCTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593203.1
CDS CCA 90 bp TGCACCGACGGTCCTGGAAATCTCACATGGTGGGCACTGCAGCGTTaGAACGTGAGCCTCGGATTTCCTGGCCCCTCTACTGTAAATGTG +
Preference number: 5 (lower is better)
Translates to: CTDGPGNLTWWALQR*NVSLGFPGPSTVNV
Trigger: CACATTTACAGTAGAGGGGCCAGGAAATCCGAGGCTCACGTTCCAACGCTGCAGTGCCCACCATGTGAGATTTCCAGGACCGTCGGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593203.1
CDS CCA 90 bp AGGGCTCCCCGATGTGGGCCCTCATCTGGGTGCCACGGAAGGTTCTaGTTTAAATCTACAGTGTATGCCTTGAAGCTAGGGAGACCCCAG +
Preference number: 5 (lower is better)
Translates to: RAPRCGPSSGCHGRF*FKSTVYALKLGRPQ
Trigger: CTGGGGTCTCCCTAGCTTCAAGGCATACACTGTAGATTTAAACCAGAACCTTCCGTGGCACCCAGATGAGGGCCCACATCGGGGAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000682285.1
ENST00000683738.1
CDS CCA 90 bp GGTCTGGTAGCCTTCCTTCCCTGGGTCCAATTCTCTGGGTCCCCCTaGCATCACCTGACTTCTTCAGGAAGATCTCTCCAGGCCACATTC +
Preference number: 5 (lower is better)
Translates to: GLVAFLPWVQFSGSP*HHLTSSGRSLQATF
Trigger: GAATGTGGCCTGGAGAGATCTTCCTGAAGAAGTCAGGTGATGCCAGGGGGACCCAGAGAATTGGACCCAGGGAAGGAAGGCTACCAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683738.1
CDS CCA 90 bp CTACCTGCCTGGTCTGGTAGCCTTCCTTCCCTGGGTCCAATTCTCTaGGTCCCCCTGGCATCACCTGACTTCTTCAGGAAGATCTCTCCA +
Preference number: 5 (lower is better)
Translates to: LPAWSGSLPSLGPIL*VPLASPDFFRKISP
Trigger: TGGAGAGATCTTCCTGAAGAAGTCAGGTGATGCCAGGGGGACCCAGAGAATTGGACCCAGGGAAGGAAGGCTACCAGACCAGGCAGGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683738.1
CDS CCA 90 bp TGGCTCTCTTACCTCTACCTGCCTGGTCTGGTAGCCTTCCTTCCCTaGGTCCAATTCTCTGGGTCCCCCTGGCATCACCTGACTTCTTCA +
Preference number: 5 (lower is better)
Translates to: WLSYLYLPGLVAFLP*VQFSGSPWHHLTSS
Trigger: TGAAGAAGTCAGGTGATGCCAGGGGGACCCAGAGAATTGGACCCAGGGAAGGAAGGCTACCAGACCAGGCAGGTAGAGGTAAGAGAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683738.1
CDS-3UTR CAA 90 bp ATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGGAGTGTCTTCCATCCCGCGGTaGCCCATGGCGCCGGCGGCC +
Preference number: 5 (lower is better)
Translates to: INRIQSAGTYSGQTERGVSSIPR*PMAPAA
Trigger: GGCCGCCGGCGCCATGGGCAACCGCGGGATGGAAGA...CACTCCTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp AGGCTGGGCCAGGCTCAGGCTGTGTGGTTAATATGGCCGGGAAGGACTATGTACGCGAAGACGTGCTTGTaGGACATGAAGCCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: RLGQAQAVWLIWPGRTMYAKTCL*DMKPFS
Trigger: GGAGAAGGGCTTCATGTCCAACAAGCACGTCTTCGC...GTACATAGTCCTTCCCGGCCATATTAACCACACAGCCTGAGCCTGGCCCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS GCA 90 bp GAGCCAGAGAAAGGGAGCAGCCAGGCCTCAGCAGAAAGTCAGGTTTaGATCCAAGGGACACATCCCAATGGGACTGGGCTTAGAAGGAAG +
Preference number: 5 (lower is better)
Translates to: EPEKGSSQASAESQV*IQGTHPNGTGLRRK
Trigger: CTTCCTTCTAAGCCCAGTCCCATTGGGATGTGTCCCTTGGATGCAAACCTGACTTTCTGCTGAGGCCTGGCTGCTCCCTTTCTCTGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS CCA 90 bp GTTCTGCCCAAAACCTCAAAGCTGAGTGTCAGAAAAGGAAGCCCATaGGGACACCTCATCCAGGCCACACCCTGCCCACCACAAGTTCAG +
Preference number: 5 (lower is better)
Translates to: VLPKTSKLSVRKGSP*GHLIQATPCPPQVQ
Trigger: CTGAACTTGTGGTGGGCAGGGTGTGGCCTGGATGAGGTGTCCCCATGGGCTTCCTTTTCTGACACTCAGCTTTGAGGTTTTGGGCAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682524.1
CDS-3UTR CAA 90 bp ACTTACAGTGGTCAAACTGAGCGAGGAGTGGGTGAGGTCTCCTCAGAGAGAGGCCTCAACGGGAGCAACTaGTTCTCCAAGACGTCCCTG +
Preference number: 5 (lower is better)
Translates to: TYSGQTERGVGEVSSERGLNGSN*FSKTSL
Trigger: CAGGGACGTCTTGGAGAACAAGTTGCTCCCGTTGAG...GCCTCTCTCTGAGGAGACCTCACCCACTCCTCGCTCAGTTTGACCACTGTAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp TGTGTGGTTAATATGGCCGGGAAGGACTATGTACACCTCAGGCCTGCCAGCTGGATCAGGCTGATGTTGTaGATGGTCAGCCAGCCCCTG +
Preference number: 5 (lower is better)
Translates to: CVVNMAGKDYVHLRPASWIRLML*MVSQPL
Trigger: CAGGGGCTGGCTGACCATCAACAACATCAGCCTGAT...CCAGCTGGCAGGCCTGAGGTGTACATAGTCCTTCCCGGCCATATTAACCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp ATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGGAGTGCAGGCCGGGATGGGATaGGGGGCGCCGAGAAGGAGG +
Preference number: 5 (lower is better)
Translates to: INRIQSAGTYSGQTERGVQAGMG*GAPRRR
Trigger: CCTCCTTCTCGGCGCCCCCAATCCCATCCCGGCCTG...CACTCCTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS TCA 90 bp ACAGCATCTGAAGGAGGTGGCACTGAGCTGAGCCAACCTCCACAGTaGTGGCTGGGTGACAGTGAGGTTCCAGAGGTGCTATTTCCTAAG +
Preference number: 5 (lower is better)
Translates to: TASEGGGTELSQPPQ*WLGDSEVPEVLFPK
Trigger: CTTAGGAAATAGCACCTCTGGAACCTCACTGTCACCCAGCCATCACTGTGGAGGTTGGCTCAGCTCAGTGCCACCTCCTTCAGATGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683738.1
CDS CCA 90 bp CTAACCATGGGGATGCCTCACAGAAGGCGTGTTGGTTGGGGACAGTaGACCACTATCAGCCCAGGAGAGCTTCCAGATATTCTCAGTTGG +
Preference number: 5 (lower is better)
Translates to: LTMGMPHRRRVGWGQ*TTISPGELPDILSW
Trigger: CCAACTGAGAATATCTGGAAGCTCTCCTGGGCTGATAGTGGTCCACTGTCCCCAACCAACACGCCTTCTGTGAGGCATCCCCATGGTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587329.1
ENST00000682285.1
ENST00000683738.1
CDS CCA 90 bp CAGGCAATACCCACCAGGTCACCAGCTGCTCAGTATAGTAACAGCTaGGGTAAGTGGGAAGGCCCAGGAATCCAGAGGAAAGAGTGGTCA +
Preference number: 5 (lower is better)
Translates to: QAIPTRSPAAQYSNS*GKWEGPGIQRKEWS
Trigger: TGACCACTCTTTCCTCTGGATTCCTGGGCCTTCCCACTTACCCCAGCTGTTACTATACTGAGCAGCTGGTGACCTGGTGGGTATTGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682285.1
ENST00000683738.1
CDS-3UTR CAA 90 bp ACTTACAGTGGTCAAACTGAGCGAGGAGTGGGTGAGGTCTCCTCAGAGAGAGGCTTCATCAGGCTGATGTaGTTGATGGTCAGCCAGCCC +
Preference number: 5 (lower is better)
Translates to: TYSGQTERGVGEVSSERGFIRLM*LMVSQP
Trigger: GGGCTGGCTGACCATCAACAACATCAGCCTGATGAA...GCCTCTCTCTGAGGAGACCTCACCCACTCCTCGCTCAGTTTGACCACTGTAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp ACTTACAGTGGTCAAACTGAGCGAGGAGTGGGTGAGGTCTCCTCAGAGAGAGGCATGGCGAAGACGTGCTaGTTGGACATGAAGCCCTTC +
Preference number: 5 (lower is better)
Translates to: TYSGQTERGVGEVSSERGMAKTC*LDMKPF
Trigger: GAAGGGCTTCATGTCCAACAAGCACGTCTTCGCCAT...GCCTCTCTCTGAGGAGACCTCACCCACTCCTCGCTCAGTTTGACCACTGTAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp TGTGTGGTTAATATGGCCGGGAAGGACTATGTACACCTCAGGCCTGCCAGCTGGTTTCTCTGCTCCGTGTaGAAGATGGCGAAGACGTGC +
Preference number: 5 (lower is better)
Translates to: CVVNMAGKDYVHLRPASWFLCSV*KMAKTC
Trigger: GCACGTCTTCGCCATCTTCAACACGGAGCAGAGAAA...CCAGCTGGCAGGCCTGAGGTGTACATAGTCCTTCCCGGCCATATTAACCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp ACTTACAGTGGTCAAACTGAGCGAGGAGTGGGTGAGGTCTCCTCAGAGAGAGGCAGGTCGCGGATGGACTaGTTGATGATGGCCACGTAT +
Preference number: 5 (lower is better)
Translates to: TYSGQTERGVGEVSSERGRSRMD*LMMATY
Trigger: ATACGTGGCCATCATCAACAAGTCCATCCGCGACCT...GCCTCTCTCTGAGGAGACCTCACCCACTCCTCGCTCAGTTTGACCACTGTAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp ACTTACAGTGGTCAAACTGAGCGAGGAGTGGGTGAGGTCTCCTCAGAGAGAGGCCCTGCTAATGGGAAGTaGATATACCCCTGCACCCCA +
Preference number: 5 (lower is better)
Translates to: TYSGQTERGVGEVSSERGPANGK*IYPCTP
Trigger: TGGGGTGCAGGGGTATATCAACTTCCCATTAGCAGG...GCCTCTCTCTGAGGAGACCTCACCCACTCCTCGCTCAGTTTGACCACTGTAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS TCA 90 bp AGGGACAGAAATTACTCTTGCGTCCGGATCGAGGGGCAGGAAGTGTaGCCACATGTGGTGGAGCAACTCTGTCTTGCAATTTGGGCGACT +
Preference number: 5 (lower is better)
Translates to: RDRNYSCVRIEGQEV*PHVVEQLCLAIWAT
Trigger: AGTCGCCCAAATTGCAAGACAGAGTTGCTCCACCACATGTGGTCACACTTCCTGCCCCTCGATCCGGACGCAAGAGTAATTTCTGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588976.1
CDS GCA 90 bp CATCCTGCTGAAATCAGGGCTCCCCGATGTGGGCCCTCATCTGGGTaGCACGGAAGGTTCTGGTTTAAATCTACAGTGTATGCCTTGAAG +
Preference number: 5 (lower is better)
Translates to: HPAEIRAPRCGPSSG*HGRFWFKSTVYALK
Trigger: CTTCAAGGCATACACTGTAGATTTAAACCAGAACCTTCCGTGGCACCCAGATGAGGGCCCACATCGGGGAGCCCTGATTTCAGCAGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682285.1
ENST00000683738.1
CDS CCA 90 bp GGAGAGAAGGGTTTTGCAACATTGCCCAGGCTGTTTTCGAACTCCTaGGCCCAAAGGATCTGCCCACATTGCCTCCCAAAGTGTTGGGAT +
Preference number: 5 (lower is better)
Translates to: GEKGFATLPRLFSNS*AQRICPHCLPKCWD
Trigger: ATCCCAACACTTTGGGAGGCAATGTGGGCAGATCCTTTGGGCCCAGGAGTTCGAAAACAGCCTGGGCAATGTTGCAAAACCCTTCTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590787.1
CDS CCA 90 bp CTCCCTAAACTAACCATGGGGATGCCTCACAGAAGGCGTGTTGGTTaGGGACAGTGGACCACTATCAGCCCAGGAGAGCTTCCAGATATT +
Preference number: 5 (lower is better)
Translates to: LPKLTMGMPHRRRVG*GQWTTISPGELPDI
Trigger: AATATCTGGAAGCTCTCCTGGGCTGATAGTGGTCCACTGTCCCCAACCAACACGCCTTCTGTGAGGCATCCCCATGGTTAGTTTAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587329.1
ENST00000682285.1
ENST00000683738.1
CDS CCA 90 bp CTGGCTACCACCTCTCCCAGGAAGACTTCCCTGAGTGGGGCATCTTaGCCTCTTCCTCATCAGAGCCAGCTCACTTTGGATTGTATTGAT +
Preference number: 5 (lower is better)
Translates to: LATTSPRKTSLSGAS*PLPHQSQLTLDCID
Trigger: ATCAATACAATCCAAAGTGAGCTGGCTCTGATGAGGAAGAGGCCAAGATGCCCCACTCAGGGAAGTCTTCCTGGGAGAGGTGGTAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591819.1
CDS-3UTR CAA 90 bp ATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGGAGTGTCGCCCACAGGCACCTaGGTGATACCCGGGAGGTCG +
Preference number: 5 (lower is better)
Translates to: INRIQSAGTYSGQTERGVSPTGT*VIPGRS
Trigger: CGACCTCCCGGGTATCACCAAGGTGCCTGTGGGCGA...CACTCCTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp TGTGTGGTTAATATGGCCGGGAAGGACTATGTACACCTCAGGCCTGCCAGCTGGCAGGGCTCTTTCAGCTaGACGACCTGCTTTTTCACA +
Preference number: 5 (lower is better)
Translates to: CVVNMAGKDYVHLRPASWQGSFS*TTCFFT
Trigger: TGTGAAAAAGCAGGTCGTCAAGCTGAAAGAGCCCTG...CCAGCTGGCAGGCCTGAGGTGTACATAGTCCTTCCCGGCCATATTAACCACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355667.11
ENST00000359692.10
CDS TCA 90 bp GAGGAGTCCCTGGGGCTTGTGTGTGGGGCTGTGGCACATGAAATGTaGCATCTGAGGAACTGCACTTGTTTGCGTGAGATAAGGTTCCAA +
Preference number: 5 (lower is better)
Translates to: EESLGLVCGAVAHEM*HLRNCTCLREIRFQ
Trigger: TTGGAACCTTATCTCACGCAAACAAGTGCAGTTCCTCAGATGTCACATTTCATGTGCCACAGCCCCACACACAAGCCCCAGGGACTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS TCA 90 bp AAGAAGGATTTTCATCAACAGCATCTGAAGGAGGTGGCACTGAGCTaGGCCAACCTCCACAGTGATGGCTGGGTGACAGTGAGGTTCCAG +
Preference number: 5 (lower is better)
Translates to: KKDFHQQHLKEVALS*ANLHSDGWVTVRFQ
Trigger: CTGGAACCTCACTGTCACCCAGCCATCACTGTGGAGGTTGGCTCAGCTCAGTGCCACCTCCTTCAGATGCTGTTGATGAAAATCCTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683738.1
CDS CCA 90 bp AGAGAATCCCAACTCAGTCACCTCCTTGGATCTGAGAGTGAGGATTaGTGCCGCCCGACCAGCCAGTCTCTAAAAGTACCTACTTGGCAA +
Preference number: 5 (lower is better)
Translates to: RESQLSHLLGSESED*CRPTSQSLKVPTWQ
Trigger: TTGCCAAGTAGGTACTTTTAGAGACTGGCTGGTCGGGCGGCACCAATCCTCACTCTCAGATCCAAGGAGGTGACTGAGTTGGGATTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587329.1
ENST00000682285.1
ENST00000683738.1
CDS-3UTR CAA 90 bp ATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGGAGTGTCGTGGAAGATGCGATaGATTCGGGCGCCCCCGGAG +
Preference number: 5 (lower is better)
Translates to: INRIQSAGTYSGQTERGVSWKMR*IRAPPE
Trigger: CTCCGGGGGCGCCCGAATCAATCGCATCTTCCACGA...CACTCCTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS TCA 90 bp ATGATTCATCTCGGGAGCCATGTCAATCGACTGGTACAAGATACCTaGAGCACTGTGGTGAGAATTCTGGGCGTGGCAGGAAACGGTGCT +
Preference number: 5 (lower is better)
Translates to: MIHLGSHVNRLVQDT*STVVRILGVAGNGA
Trigger: AGCACCGTTTCCTGCCACGCCCAGAATTCTCACCACAGTGCTTCAGGTATCTTGTACCAGTCGATTGACATGGCTCCCGAGATGAATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS GCA 90 bp TTTTGGACTTGCAGTGCAAAAACTCGGCATGTTCTTGAATGTCCATaGCACCAGGGAAGGGACGCCCATCTGCCTTGGTCATTGCTGTGT +
Preference number: 5 (lower is better)
Translates to: FWTCSAKTRHVLECP*HQGRDAHLPWSLLC
Trigger: ACACAGCAATGACCAAGGCAGATGGGCGTCCCTTCCCTGGTGGCATGGACATTCAAGAACATGCCGAGTTTTTGCACTGCAAGTCCAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587991.5
CDS CCA 90 bp CTGAGGGTTCTGCACAAAGGAAGGAGGTGTTACCCACAGCAGGGATaGACAGCAAATATGATTCATCTCGGGAGCCATGTCAATCGACTG +
Preference number: 5 (lower is better)
Translates to: LRVLHKGRRCYPQQG*TANMIHLGSHVNRL
Trigger: CAGTCGATTGACATGGCTCCCGAGATGAATCATATTTGCTGTCCATCCCTGCTGTGGGTAACACCTCCTTCCTTTGTGCAGAACCCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS-3UTR CAA 90 bp ATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGGAGTGAGCTGGCTCTGTAGTTaGCTACGTAGGGCCGGCAGC +
Preference number: 5 (lower is better)
Translates to: INRIQSAGTYSGQTERGVSWLCS*LRRAGS
Trigger: GCTGCCGGCCCTACGTAGCAAACTACAGAGCCAGCT...CACTCCTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp ACTTACAGTGGTCAAACTGAGCGAGGAGTGGGTGAGGTCTCCTCAGAGAGAGGCAAGGCCTTCGTATTGTaGATCATGAGGTGCATGATG +
Preference number: 5 (lower is better)
Translates to: TYSGQTERGVGEVSSERGKAFVL*IMRCMM
Trigger: CATCATGCACCTCATGATCAACAATACGAAGGCCTT...GCCTCTCTCTGAGGAGACCTCACCCACTCCTCGCTCAGTTTGACCACTGTAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp TGTGTGGTTAATATGGCCGGGAAGGACTATGTACACCTCAGGCCTGCCAGCTGGATGAAGGCCTTCGTATaGTTGATCATGAGGTGCATG +
Preference number: 5 (lower is better)
Translates to: CVVNMAGKDYVHLRPASWMKAFV*LIMRCM
Trigger: CATGCACCTCATGATCAACAATACGAAGGCCTTCAT...CCAGCTGGCAGGCCTGAGGTGTACATAGTCCTTCCCGGCCATATTAACCACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS TCA 90 bp GGAGCCATGTCAATCGACTGGTACAAGATACCTGAAGCACTGTGGTaGGAATTCTGGGCGTGGCAGGAAACGGTGCTAGGATCAATTAGT +
Preference number: 5 (lower is better)
Translates to: GAMSIDWYKIPEALW*EFWAWQETVLGSIS
Trigger: ACTAATTGATCCTAGCACCGTTTCCTGCCACGCCCAGAATTCTCACCACAGTGCTTCAGGTATCTTGTACCAGTCGATTGACATGGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS TCA 90 bp ATGGTCACAGCCAGTGAGTGGCAGGGTGAGGATTTGAACTTAGCCTaGACAAGTCTGTGTTTGCAGCTGTACCTCCCAGGGTTAATACAG +
Preference number: 5 (lower is better)
Translates to: MVTASEWQGEDLNLA*TSLCLQLYLPGLIQ
Trigger: CTGTATTAACCCTGGGAGGTACAGCTGCAAACACAGACTTGTTCAGGCTAAGTTCAAATCCTCACCCTGCCACTCACTGGCTGTGACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591818.1
ENST00000593203.1
CDS TCA 90 bp TCTGTAAACTTTTTGGACTTGCAGTGCAAAAACTCGGCATGTTCTTaGATGTCCATGCCACCAGGGAAGGGACGCCCATCTGCCTTGGTC +
Preference number: 5 (lower is better)
Translates to: SVNFLDLQCKNSACS*MSMPPGKGRPSALV
Trigger: GACCAAGGCAGATGGGCGTCCCTTCCCTGGTGGCATGGACATTCAAGAACATGCCGAGTTTTTGCACTGCAAGTCCAAAAAGTTTACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000587991.5
CDS TCA 90 bp TCCTCAATCAGCTTTGTCAGGTGCACCGATAAATGTTGTATCTGGTaGCTCCATAGCCTGAGATTTGGCTCTAGAGGCCCTCCCCTAGGA +
Preference number: 5 (lower is better)
Translates to: SSISFVRCTDKCCIW*LHSLRFGSRGPPLG
Trigger: TCCTAGGGGAGGGCCTCTAGAGCCAAATCTCAGGCTATGGAGTCACCAGATACAACATTTATCGGTGCACCTGACAAAGCTGATTGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682285.1
ENST00000683738.1
CDS CCA 90 bp ATAAGTCAGAGAGAAACAAAGCATGGTCAGCAATTTCATTGGCCCTaGCCGGGTCCCCAACAAGGAATGAAGGTTGTGTCATGTGTGGGG +
Preference number: 5 (lower is better)
Translates to: ISQRETKHGQQFHWP*PGPQQGMKVVSCVG
Trigger: CCCCACACATGACACAACCTTCATTCCTTGTTGGGGACCCGGCCAGGGCCAATGAAATTGCTGACCATGCTTTGTTTCTCTCTGACTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593220.1
CDS CCA 90 bp GGGGAGATAAGTCAGAGAGAAACAAAGCATGGTCAGCAATTTCATTaGCCCTGGCCGGGTCCCCAACAAGGAATGAAGGTTGTGTCATGT +
Preference number: 5 (lower is better)
Translates to: GEISQRETKHGQQFH*PWPGPQQGMKVVSC
Trigger: ACATGACACAACCTTCATTCCTTGTTGGGGACCCGGCCAGGGCCAATGAAATTGCTGACCATGCTTTGTTTCTCTCTGACTTATCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593220.1
CDS TCA 90 bp TGGGCACAAGAGGGCAAGATTTCTGCCATGTGGAAAAATATGCTCTaGTCCATGAGTGACATCTGCATAGGAGATAGAAGGAGGAGGGGC +
Preference number: 5 (lower is better)
Translates to: WAQEGKISAMWKNML*SMSDICIGDRRRRG
Trigger: GCCCCTCCTCCTTCTATCTCCTATGCAGATGTCACTCATGGATCAGAGCATATTTTTCCACATGGCAGAAATCTTGCCCTCTTGTGCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590806.5
CDS TCA 90 bp GCAGCATGTGATGCAATCACAGACATCCTGTCTGCTTCGTGTGTCTaGCGTTCATTCCTTTTCGTGGTCGAATCTGTCCATTGCACTGAT +
Preference number: 5 (lower is better)
Translates to: AACDAITDILSASCV*RSFLFVVESVHCTD
Trigger: ATCAGTGCAATGGACAGATTCGACCACGAAAAGGAATGAACGTCAGACACACGAAGCAGACAGGATGTCTGTGATTGCATCACATGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588976.1
CDS TCA 90 bp GGGACAGCTGCTGGTCATGAAATGACACATATCTTGCATGACTCCTaGCCCAAATTTAGAGGACATCCAAGGTCGACAGGGTGTGTTTCT +
Preference number: 5 (lower is better)
Translates to: GTAAGHEMTHILHDS*PKFRGHPRSTGCVS
Trigger: AGAAACACACCCTGTCGACCTTGGATGTCCTCTAAATTTGGGTCAGGAGTCATGCAAGATATGTGTCATTTCATGACCAGCAGCTGTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681972.1
CDS CCA 90 bp TATAACAAAGGGTGGTGTGGCCTGGGCATTGGAGTCAATAAATTATaGTCAGAAAATCACAAGAGCCTGCTGATTGGGGCTCAGGGACAC +
Preference number: 5 (lower is better)
Translates to: YNKGWCGLGIGVNKL*SENHKSLLIGAQGH
Trigger: GTGTCCCTGAGCCCCAATCAGCAGGCTCTTGTGATTTTCTGACCATAATTTATTGACTCCAATGCCCAGGCCACACCACCCTTTGTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593203.1
CDS-3UTR CAA 90 bp AGTTTATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGCTCAACGGGAGCAACTaGTTCTCCAAGACGTCCCTG +
Preference number: 5 (lower is better)
Translates to: SLLIEYRVQALTVVKLSELNGSN*FSKTSL
Trigger: CAGGGACGTCTTGGAGAACAAGTTGCTCCCGTTGAG...CTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAATAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp AGTTTATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGTTCATCAGGCTGATGTaGTTGATGGTCAGCCAGCCC +
Preference number: 5 (lower is better)
Translates to: SLLIEYRVQALTVVKLSEFIRLM*LMVSQP
Trigger: GGGCTGGCTGACCATCAACAACATCAGCCTGATGAA...CTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAATAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp AGTTTATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGATGGCGAAGACGTGCTaGTTGGACATGAAGCCCTTC +
Preference number: 5 (lower is better)
Translates to: SLLIEYRVQALTVVKLSEMAKTC*LDMKPF
Trigger: GAAGGGCTTCATGTCCAACAAGCACGTCTTCGCCAT...CTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAATAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp AGTTTATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGTCGCGGATGGACTTGTaGATGATGGCCACGTATGAG +
Preference number: 5 (lower is better)
Translates to: SLLIEYRVQALTVVKLSESRMDL*MMATYE
Trigger: CTCATACGTGGCCATCATCAACAAGTCCATCCGCGA...CTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAATAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp AGTTTATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGCCTGCTAATGGGAAGTaGATATACCCCTGCACCCCA +
Preference number: 5 (lower is better)
Translates to: SLLIEYRVQALTVVKLSEPANGK*IYPCTP
Trigger: TGGGGTGCAGGGGTATATCAACTTCCCATTAGCAGG...CTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAATAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp AGTTTATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGTGCAGGATCATGTCCTaGATCTGGTACTCGATGTCT +
Preference number: 5 (lower is better)
Translates to: SLLIEYRVQALTVVKLSECRIMS*IWYSMS
Trigger: AGACATCGAGTACCAGATCAAGGACATGATCCTGCA...CTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAATAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp AGTTTATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGAAGGCCTTCGTATTGTaGATCATGAGGTGCATGATG +
Preference number: 5 (lower is better)
Translates to: SLLIEYRVQALTVVKLSEKAFVL*IMRCMM
Trigger: CATCATGCACCTCATGATCAACAATACGAAGGCCTT...CTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAATAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS-3UTR CAA 90 bp AGTTTATTAATAGAATACAGAGTGCAGGCACTTACAGTGGTCAAACTGAGCGAGATGAAGGCCTTCGTATaGTTGATCATGAGGTGCATG +
Preference number: 5 (lower is better)
Translates to: SLLIEYRVQALTVVKLSEMKAFV*LIMRCM
Trigger: CATGCACCTCATGATCAACAATACGAAGGCCTTCAT...CTCGCTCAGTTTGACCACTGTAAGTGCCTGCACTCTGTATTCTATTAATAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
CDS CCA 90 bp CAATACCTTAATCACTTAGCCACATCTGCTATAGAACAGGAGTGCTaGCAAGCTTATTTGGAAAGAATGCTAGGATTGCTTAGCAATGTC +
Preference number: 5 (lower is better)
Translates to: QYLNHLATSAIEQEC*QAYLERMLGLLSNV
Trigger: GACATTGCTAAGCAATCCTAGCATTCTTTCCAAATAAGCTTGCCAGCACTCCTGTTCTATAGCAGATGTGGCTAAGTGATTAAGGTATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590806.5
CDS GCA 90 bp AAACAATACCTTAATCACTTAGCCACATCTGCTATAGAACAGGAGTaGTGGCAAGCTTATTTGGAAAGAATGCTAGGATTGCTTAGCAAT +
Preference number: 5 (lower is better)
Translates to: KQYLNHLATSAIEQE*WQAYLERMLGLLSN
Trigger: ATTGCTAAGCAATCCTAGCATTCTTTCCAAATAAGCTTGCCAGCACTCCTGTTCTATAGCAGATGTGGCTAAGTGATTAAGGTATTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590806.5
CDS GCA 72 bp CCCTCAACGACCTGGCCCCGCGGCGTCTGTAGCCGTTaGTCCCCGCCCGCCCGGGCCTCGGCAAGACGCCCG +
Preference number: 6 (lower is better)
Translates to: PSTTWPRGVCSR*SPPARASARRP
Trigger: CGGGCGTCTTGCCGAGGCCCGGGCGGGCGGGGAGCAACGGCTACAGACGCCGCGGGGCCAGGTCGTTGAGGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000585892.5
ENST00000682285.1
ENST00000682524.1
ENST00000683738.1
CDS CCA 72 bp CCCCCTCGAGGCCTAGTCGAGCAGGGATGGCTCGGCTaGGCGGATAATGGTGGGCCGGCTGGGCGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: PPRGLVEQGWLG*ADNGGPAGRSR
Trigger: CCTGCTGCGCCCAGCCGGCCCACCATTATCCGCCCAGCCGAGCCATCCCTGCTCGACTAGGCCTCGAGGGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
ENST00000590806.5
ENST00000681972.1
CDS CCA 72 bp CCTGACCCCTCAAGGCAAGGCCCAGTGGCCGCCCTCTaGACACCCACAAGCCCTGCACGGCCCCGCCCAGCA +
Preference number: 6 (lower is better)
Translates to: PDPSRQGPVAAL*TPTSPARPRPA
Trigger: TGCTGGGCGGGGCCGTGCAGGGCTTGTGGGTGTCCAGAGGGCGGCCACTGGGCCTTGCCTTGAGGGGTCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000682285.1
ENST00000683738.1
CDS CCA 72 bp TGCGAAGGGCTGGCCTGCATCCCCCAGTGCAGGGCATaGCAGGGCACGGCACGGCAGGAGCGCCAGAGATGG +
Preference number: 6 (lower is better)
Translates to: CEGLACIPQCRA*QGTARQERQRW
Trigger: CCATCTCTGGCGCTCCTGCCGTGCCGTGCCCTGCCATGCCCTGCACTGGGGGATGCAGGCCAGCCCTTCGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS CCA 72 bp CTCTTCAGCGGGCCCCAGGGATGTCCCACCCAGGGCTaGGGCCACCCAGCCAGGGCGTACCCCGTTCACACA +
Preference number: 6 (lower is better)
Translates to: LFSGPQGCPTQG*GHPARAYPVHT
Trigger: TGTGTGAACGGGGTACGCCCTGGCTGGGTGGCCCCAGCCCTGGGTGGGACATCCCTGGGGCCCGCTGAAGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000682285.1
ENST00000683738.1
CDS TCA 72 bp GGGCTTCATCCGGACTACCCCGACCCACCCCGGGCCTaGCATTCTGAACCAGGGCCACCAGCCCACAGCTCC +
Preference number: 6 (lower is better)
Translates to: GLHPDYPDPPRA*HSEPGPPAHSS
Trigger: GGAGCTGTGGGCTGGTGGCCCTGGTTCAGAATGTCAGGCCCGGGGTGGGTCGGGGTAGTCCGGATGAAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS GCA 72 bp GGGCTCGGGGGCTGGGACCATGCCAGGTGCTCACGCTaGCTCCCTGGAGATCAGCTAAGGCCCAGCACCAAG +
Preference number: 6 (lower is better)
Translates to: GLGGWDHARCSR*LPGDQLRPSTK
Trigger: CTTGGTGCTGGGCCTTAGCTGATCTCCAGGGAGGCAGCGTGAGCACCTGGCATGGTCCCAGCCCCCGAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591266.1
CDS GCA 72 bp CTCCTAGGCCTGGCCCGGTTTCTAAGGAGAGGGATGTaGCCGCACACCCCTCGGTGGCCTGGCTCTCCTGCC +
Preference number: 6 (lower is better)
Translates to: LLGLARFLRRGM*PHTPRWPGSPA
Trigger: GGCAGGAGAGCCAGGCCACCGAGGGGTGTGCGGGCACATCCCTCTCCTTAGAAACCGGGCCAGGCCTAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS GCA 72 bp CAACTAACGGCAGGCAGCCTGGGGGCTGTGCTCCCATaGTCCCTGGCCGCTGGAGGCATGTGTGGGCAGAGC +
Preference number: 6 (lower is better)
Translates to: QLTAGSLGAVLP*SLAAGGMCGQS
Trigger: GCTCTGCCCACACATGCCTCCAGCGGCCAGGGAGCATGGGAGCACAGCCCCCAGGCTGCCTGCCGTTAGTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS GCA 72 bp GCACGCTCAAGCGCTTCTTCCAGGACAAGCGCCCGGTaGCCACGTAGCCCCTGGGCACTCCTGGGGGAATCC +
Preference number: 6 (lower is better)
Translates to: ARSSASSRTSAR*PRSPWALLGES
Trigger: GGATTCCCCCAGGAGTGCCCAGGGGCTACGTGGGCACCGGGCGCTTGTCCTGGAAGAAGCGCTTGAGCGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591818.1
CDS GCA 72 bp GGGAGGGGCCTCCCACGAAGCTCAGAAGAAAGGTCGTaGGGGAGCCGATGGAGGTGGTCGCCTGGGCACTCC +
Preference number: 6 (lower is better)
Translates to: GRGLPRSSEERS*GSRWRWSPGHS
Trigger: GGAGTGCCCAGGCGACCACCTCCATCGGCTCCCGCACGACCTTTCTTCTGAGCTTCGTGGGAGGCCCCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593203.1
CDS GCA 72 bp AGGCCCAGTGGCCGCCCTCTGGACACCCACAAGCCCTaGACGGCCCCGCCCAGCACTAAGCACACTACACCT +
Preference number: 6 (lower is better)
Translates to: RPSGRPLDTHKP*TAPPSTKHTTP
Trigger: AGGTGTAGTGTGCTTAGTGCTGGGCGGGGCCGTGCAGGGCTTGTGGGTGTCCAGAGGGCGGCCACTGGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682285.1
ENST00000683738.1
CDS CCA 72 bp GGGGCTGGGAAGAGGTCACTGTTGGCAAACACGCTCTaGGGTCCAGGCCGGGATGGGATTGGGGGCGCCGAG +
Preference number: 6 (lower is better)
Translates to: GAGKRSLLANTL*GPGRDGIGGAE
Trigger: CTCGGCGCCCCCAATCCCATCCCGGCCTGGACCCCAGAGCGTGTTTGCCAACAGTGACCTCTTCCCAGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
ENST00000585892.5
ENST00000589106.1
ENST00000590806.5
ENST00000593203.1
ENST00000681972.1
CDS CCA 72 bp CAGGAGCGCCAGAGATGGGGCCTCCAGGAATCCCTCTaGGGCCCAGATGCTGTCCTAGTCGGGGGCGGTCCT +
Preference number: 6 (lower is better)
Translates to: QERQRWGLQESL*GPDAVLVGGGP
Trigger: AGGACCGCCCCCGACTAGGACAGCATCTGGGCCCCAGAGGGATTCCTGGAGGCCCCATCTCTGGCGCTCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS CCA 72 bp ACCTGCAGGGCCCTCCTGGCGATGGGGCCTGGCCGCTaGCTCTCTTACCTCTACCTGCCTGGTCTGGTAGCC +
Preference number: 6 (lower is better)
Translates to: TCRALLAMGPGR*LSYLYLPGLVA
Trigger: GGCTACCAGACCAGGCAGGTAGAGGTAAGAGAGCCAGCGGCCAGGCCCCATCGCCAGGAGGGCCCTGCAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683738.1
CDS TCA 72 bp CGGAGGCACGCACAGGGCGGCCTGGGACCCAGGCACTaGCAGACTTGGCCAAGCTACAAAGGGTGGGCTGAG +
Preference number: 6 (lower is better)
Translates to: RRHAQGGLGPRH*QTWPSYKGWAE
Trigger: CTCAGCCCACCCTTTGTAGCTTGGCCAAGTCTGTCAGTGCCTGGGTCCCAGGCCGCCCTGTGCGTGCCTCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS TCA 72 bp TGGGGGTCAGAACCCAGGCCTGCGCAGGGACTCACCTaGCAACTAACGGCAGGCAGCCTGGGGGCTGTGCTC +
Preference number: 6 (lower is better)
Translates to: WGSEPRPAQGLT*QLTAGSLGAVL
Trigger: GAGCACAGCCCCCAGGCTGCCTGCCGTTAGTTGTCAGGTGAGTCCCTGCGCAGGCCTGGGTTCTGACCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS TCA 72 bp CGGATGCCTGAGTCCACTGCCCGGAAACCCTCAGGGTaGCCCGAGGACCCCACGGCGATGGAAGGGCAGACA +
Preference number: 6 (lower is better)
Translates to: RMPESTARKPSG*PEDPTAMEGQT
Trigger: TGTCTGCCCTTCCATCGCCGTGGGGTCCTCGGGTCACCCTGAGGGTTTCCGGGCAGTGGACTCAGGCATCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593220.1
CDS GCA 72 bp CTCGGCATGTTAGGCTGGGCTCGGGGGCTGGGACCATaGCAGGTGCTCACGCTGCCTCCCTGGAGATCAGCT +
Preference number: 6 (lower is better)
Translates to: LGMLGWARGLGP*QVLTLPPWRSA
Trigger: AGCTGATCTCCAGGGAGGCAGCGTGAGCACCTGGCATGGTCCCAGCCCCCGAGCCCAGCCTAACATGCCGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591266.1
CDS GCA 72 bp GAGACAGAAGAGGCGGCAGGCCGTTGCGGGCTAGGGTaGACAGTGACAGGCAGGCAGGCACATGGGGCGGTA +
Preference number: 6 (lower is better)
Translates to: ETEEAAGRCGLG*TVTGRQAHGAV
Trigger: TACCGCCCCATGTGCCTGCCTGCCTGTCACTGTGCACCCTAGCCCGCAACGGCCTGCCGCCTCTTCTGTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS GCA 72 bp GATGTGCCCGCACACCCCTCGGTGGCCTGGCTCTCCTaGCTCCAGCCGGGGTTAGTGTTGGTCAGAGCTGGA +
Preference number: 6 (lower is better)
Translates to: DVPAHPSVAWLS*LQPGLVLVRAG
Trigger: TCCAGCTCTGACCAACACTAACCCCGGCTGGAGGCAGGAGAGCCAGGCCACCGAGGGGTGTGCGGGCACATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS GCA 72 bp CCCGGCTGGAGCGCAGCATCCAGATGCTCACGCTACTaGGGGCCTTCGAGGCACGTGACCGCAACCTGCAAG +
Preference number: 6 (lower is better)
Translates to: PGWSAASRCSRY*GPSRHVTATCK
Trigger: CTTGCAGGTTGCGGTCACGTGCCTCGAAGGCCCGCAGTAGCGTGAGCATCTGGATGCTGCGCTCCAGCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591818.1
ENST00000593203.1
CDS GCA 72 bp AGACCATGCGGACCCGGCTGGAGCGCAGCATCCAGATaGTCACGCTACTGCGGGCCTTCGAGGCACGTGACC +
Preference number: 6 (lower is better)
Translates to: RPCGPGWSAASR*SRYCGPSRHVT
Trigger: GGTCACGTGCCTCGAAGGCCCGCAGTAGCGTGAGCATCTGGATGCTGCGCTCCAGCCGGGTCCGCATGGTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591818.1
ENST00000593203.1
CDS CCA 72 bp GGGCTGGGACCATGCCAGGTGCTCACGCTGCCTCCCTaGAGATCAGCTAAGGCCCAGCACCAAGTGGGCACC +
Preference number: 6 (lower is better)
Translates to: GLGPCQVLTLPP*RSAKAQHQVGT
Trigger: GGTGCCCACTTGGTGCTGGGCCTTAGCTGATCTCCAGGGAGGCAGCGTGAGCACCTGGCATGGTCCCAGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591266.1
CDS CCA 72 bp CTGGAGCACAGGGCCCACGCTACACTTTGGGGTGCATaGCCACAGGGCCAGGGCACTGATCGGGGCCATGCT +
Preference number: 6 (lower is better)
Translates to: LEHRAHATLWGA*PQGQGTDRGHA
Trigger: AGCATGGCCCCGATCAGTGCCCTGGCCCTGTGGCCATGCACCCCAAAGTGTAGCGTGGGCCCTGTGCTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS CCA 72 bp AAGGAGAGGGATGTGCCCGCACACCCCTCGGTGGCCTaGCTCTCCTGCCTCCAGCCGGGGTTAGTGTTGGTC +
Preference number: 6 (lower is better)
Translates to: KERDVPAHPSVA*LSCLQPGLVLV
Trigger: GACCAACACTAACCCCGGCTGGAGGCAGGAGAGCCAGGCCACCGAGGGGTGTGCGGGCACATCCCTCTCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS CCA 72 bp GGGACCCCTGGACCATGCAGAAGTCACTGCCCAGGCTaGGGACAGCATGAGATGCCACCGGGCGCCCCTTGT +
Preference number: 6 (lower is better)
Translates to: GTPGPCRSHCPG*GQHEMPPGAPC
Trigger: ACAAGGGGCGCCCGGTGGCATCTCATGCTGTCCCCAGCCTGGGCAGTGACTTCTGCATGGTCCAGGGGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS CCA 72 bp AAATCCTCCCCTGGACCTGCAGGGCCCTCCTGGCGATaGGGCCTGGCCGCTGGCTCTCTTACCTCTACCTGC +
Preference number: 6 (lower is better)
Translates to: KSSPGPAGPSWR*GLAAGSLTSTC
Trigger: GCAGGTAGAGGTAAGAGAGCCAGCGGCCAGGCCCCATCGCCAGGAGGGCCCTGCAGGTCCAGGGGAGGATTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683738.1
CDS CAA 90 bp GAGGGAGGCCTGACCCTTCCCCTCCCGCTGCCCTGTAGGAGTCCATaGAGACCATGCGGACCCGGCTGGAGCGCAGCATCCAGATGCTCA +
Preference number: 6 (lower is better)
Translates to: EGGLTLPLPLPCRSP*RPCGPGWSAASRCS
Trigger: TGAGCATCTGGATGCTGCGCTCCAGCCGGGTCCGCATGGTCTCAATGGACTCCTACAGGGCAGCGGGAGGGGAAGGGTCAGGCCTCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591818.1
ENST00000593203.1
CDS GCA 72 bp GAGTACCCAGGGACCCCTGGACCATGCAGAAGTCACTaGCCAGGCTGGGGACAGCATGAGATGCCACCGGGC +
Preference number: 6 (lower is better)
Translates to: EYPGTPGPCRSH*PGWGQHEMPPG
Trigger: GCCCGGTGGCATCTCATGCTGTCCCCAGCCTGGGCAGTGACTTCTGCATGGTCCAGGGGTCCCTGGGTACTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS GCA 72 bp GCACGCTCAAGCGCTTCTTCCAGGACAAGCGCCCGGTaGCCACGTAGCCCCTGCCATGGAAGGAAGAACGGG +
Preference number: 6 (lower is better)
Translates to: ARSSASSRTSAR*PRSPCHGRKNG
Trigger: CCCGTTCTTCCTTCCATGGCAGGGGCTACGTGGGCACCGGGCGCTTGTCCTGGAAGAAGCGCTTGAGCGTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593203.1
CDS GCA 72 bp GGTCTTCCTCTGAGGGTGGGGAGCTGGGTGTGGGTTTaGCCACTGCTCTATCACAGGGCCCAGCGAGAGGGC +
Preference number: 6 (lower is better)
Translates to: GLPLRVGSWVWV*PLLYHRAQREG
Trigger: GCCCTCTCGCTGGGCCCTGTGATAGAGCAGTGGGCAAACCCACACCCAGCTCCCCACCCTCAGAGGAAGACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682285.1
ENST00000683738.1
CDS CCA 72 bp GGGTTGGCCTTACCTGGGCACTCCTGGGGGAATCCCTaGGGGGATCCGAACTGGCCGAGATGGGATCTGAGG +
Preference number: 6 (lower is better)
Translates to: GLALPGHSWGNP*GDPNWPRWDLR
Trigger: CCTCAGATCCCATCTCGGCCAGTTCGGATCCCCCCAGGGATTCCCCCAGGAGTGCCCAGGTAAGGCCAACCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000589106.1
CDS CCA 72 bp TGGTCAGAGCTGGAGCACAGGGCCCACGCTACACTTTaGGGTGCATGGCCACAGGGCCAGGGCACTGATCGG +
Preference number: 6 (lower is better)
Translates to: WSELEHRAHATL*GAWPQGQGTDR
Trigger: CCGATCAGTGCCCTGGCCCTGTGGCCATGCACCCCAAAGTGTAGCGTGGGCCCTGTGCTCCAGCTCTGACCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS CCA 72 bp TGCCAAAACGGGAGTGTGCAGTCAGGGCCTGCGGTCTaGCCCCATGAGTCTCCTTCCGTCCTCAGCGGGCAG +
Preference number: 6 (lower is better)
Translates to: CQNGSVQSGPAV*PHESPSVLSGQ
Trigger: CTGCCCGCTGAGGACGGAAGGAGACTCATGGGGCCAGACCGCAGGCCCTGACTGCACACTCCCGTTTTGGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593203.1
CDS TCA 72 bp CCAGATGCTCACGCTACTGCGGGCCTTCGAGGCACGTaGCCGCAACCTGCAAGAGGGCAACTTGGAGCGGGT +
Preference number: 6 (lower is better)
Translates to: PDAHATAGLRGT*PQPARGQLGAG
Trigger: ACCCGCTCCAAGTTGCCCTCTTGCAGGTTGCGGTCACGTGCCTCGAAGGCCCGCAGTAGCGTGAGCATCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591818.1
ENST00000593203.1
CDS GCA 72 bp CAGCTGTCAACGTGGCGGTGCTGCTGCTGGTGGCTGTaGTGCAGGTCTGCACGCTCAAGCGCTTCTTCCAGG +
Preference number: 6 (lower is better)
Translates to: QLSTWRCCCWWL*CRSARSSASSR
Trigger: CCTGGAAGAAGCGCTTGAGCGTGCAGACCTGCAGCACAGCCACCAGCAGCAGCACCGCCACGTTGACAGCTG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591818.1
ENST00000593203.1
CDS CCA 72 bp GCGGGGTGGGGGCACTGCCTTGTCTCAGCCCAGAGCTaGGCACAGAACGAGTGCTTAGTAGACCCTGGTTCC +
Preference number: 6 (lower is better)
Translates to: AGWGHCLVSAQS*AQNECLVDPGS
Trigger: GGAACCAGGGTCTACTAAGCACTCGTTCTGTGCCCAGCTCTGGGCTGAGACAAGGCAGTGCCCCCACCCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS CCA 72 bp CACAGTTGTTTGGAGCAGGCAGTGACCCCTGGCATCTaGCCATTCACGGGCTGCCTGGTGGTGGGTGAGGGG +
Preference number: 6 (lower is better)
Translates to: HSCLEQAVTPGI*PFTGCLVVGEG
Trigger: CCCCTCACCCACCACCAGGCAGCCCGTGAATGGCCAGATGCCAGGGGTCACTGCCTGCTCCAAACAACTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS CCA 72 bp CCCTGTAGGAGTCCATTGAGACCATGCGGACCCGGCTaGAGCGCAGCATCCAGATGCTCACGCTACTGCGGG +
Preference number: 6 (lower is better)
Translates to: PCRSPLRPCGPG*SAASRCSRYCG
Trigger: CCCGCAGTAGCGTGAGCATCTGGATGCTGCGCTCCAGCCGGGTCCGCATGGTCTCAATGGACTCCTACAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591818.1
ENST00000593203.1
CDS CAA 90 bp CTGCGGGCCTTCGAGGCACGTGACCGCAACCTGCAAGAGGGCAACTaGGAGCGGGTCAACTTCTGGTCAGCTGTCAACGTGGCGGTGCTG +
Preference number: 6 (lower is better)
Translates to: LRAFEARDRNLQEGN*ERVNFWSAVNVAVL
Trigger: CAGCACCGCCACGTTGACAGCTGACCAGAAGTTGACCCGCTCCAAGTTGCCCTCTTGCAGGTTGCGGTCACGTGCCTCGAAGGCCCGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591818.1
ENST00000593203.1
CDS CAA 90 bp CCCTGCATGTGGTCTTCCTCTGAGGGTGGGGAGCTGGGTGTGGGTTaGCCCACTGCTCTATCACAGGGCCCAGCGAGAGGGCATACCAGC +
Preference number: 6 (lower is better)
Translates to: PCMWSSSEGGELGVG*PTALSQGPARGHTS
Trigger: GCTGGTATGCCCTCTCGCTGGGCCCTGTGATAGAGCAGTGGGCAAACCCACACCCAGCTCCCCACCCTCAGAGGAAGACCACATGCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682285.1
ENST00000683738.1
CDS CAA 90 bp AGGCCCTGGCATAGGATCGGCTCAGCTACAAGAAAGACCCTGGGATaGCCAGAAGAGCCCCGCCAGAGGGCAGTGGCAGGGATGACCAGC +
Preference number: 6 (lower is better)
Translates to: RPWHRIGSATRKTLG*PEEPRQRAVAGMTS
Trigger: GCTGGTCATCCCTGCCACTGCCCTCTGGCGGGGCTCTTCTGGCAATCCCAGGGTCTTTCTTGTAGCTGAGCCGATCCTATGCCAGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS TCA 72 bp CACAGATGGGAGACCCAGAGGCCACGGCCACGCTCATaGCGGGGCTGGGCTATGTGGCCTCTGGTAGGAAAA +
Preference number: 6 (lower is better)
Translates to: HRWETQRPRPRS*RGWAMWPLVGK
Trigger: TTTTCCTACCAGAGGCCACATAGCCCAGCCCCGTCATGAGCGTGGCCGTGGCCTCTGGGTCTCCCATCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS TCA 72 bp CAAAGGTGTGAGCCCAGGGGCCCTCCCCAAGGACATTaGAGGAGCGCGGCTCATGTCCCAAGCTGGCTGCAA +
Preference number: 6 (lower is better)
Translates to: QRCEPRGPPQGH*RSAAHVPSWLQ
Trigger: TTGCAGCCAGCTTGGGACATGAGCCGCGCTCCTTCAATGTCCTTGGGGAGGGCCCCTGGGCTCACACCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS TCA 72 bp CAGCATCTCAGAAACCATGCGGCGCTGGCTAGACACTaGATCACCAGCAGCGGCGGTGACAGCACGTGCCCC +
Preference number: 6 (lower is better)
Translates to: QHLRNHAALARH*ITSSGGDSTCP
Trigger: GGGGCACGTGCTGTCACCGCCGCTGCTGGTGATTCAGTGTCTAGCCAGCGCCGCATGGTTTCTGAGATGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588976.1
CDS GCA 72 bp TCAGTTGCTGATTCAGCGTCTTCTGCAGATGTGGCGTaGCCATGCGGTCGGCCATGTGCCGGTAGGCCGGGT +
Preference number: 6 (lower is better)
Translates to: SVADSASSADVA*PCGRPCAGRPG
Trigger: ACCCGGCCTACCGGCACATGGCCGACCGCATGGGCACGCCACATCTGCAGAAGACGCTGAATCAGCAACTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
ENST00000585892.5
ENST00000587485.1
ENST00000587830.2
ENST00000591701.5
ENST00000682285.1
ENST00000682524.1
ENST00000683738.1
CDS GCA 72 bp AGTGCCTGTGTGAGTCGACTTATACCCAGGGCAACGTaGAGTCCAGCGCCGGCTGCGGCATGGGGTTTCCAG +
Preference number: 6 (lower is better)
Translates to: SACVSRLIPRAT*SPAPAAAWGFQ
Trigger: CTGGAAACCCCATGCCGCAGCCGGCGCTGGACTGCACGTTGCCCTGGGTATAAGTCGACTCACACAGGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590806.5
CDS GCA 72 bp GTAGCTGTCATCTGCGTGGGGGTCAGAACCCAGGCCTaGGCAGGGACTCACCTGACAACTAACGGCAGGCAG +
Preference number: 6 (lower is better)
Translates to: VAVICVGVRTQA*AGTHLTTNGRQ
Trigger: CTGCCTGCCGTTAGTTGTCAGGTGAGTCCCTGCGCAGGCCTGGGTTCTGACCCCCACGCAGATGACAGCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS GCA 72 bp GGGTCAACTTCTGGTCAGCTGTCAACGTGGCGGTGCTaGTGCTGGTGGCTGTGCTGCAGGTCTGCACGCTCA +
Preference number: 6 (lower is better)
Translates to: GSTSGQLSTWRC*CWWLCCRSARS
Trigger: TGAGCGTGCAGACCTGCAGCACAGCCACCAGCAGCAGCACCGCCACGTTGACAGCTGACCAGAAGTTGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591818.1
ENST00000593203.1
CDS GCA 72 bp AGCCTAAGCCTCCCATCCTGTGTTAGCGTTGCCTGGTaGGGGGCAGGGCCTAACAAGGAAACCTGGGCCCTC +
Preference number: 6 (lower is better)
Translates to: SLSLPSCVSVAW*GAGPNKETWAL
Trigger: GAGGGCCCAGGTTTCCTTGTTAGGCCCTGCCCCGCACCAGGCAACGCTAACACAGGATGGGAGGCTTAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593203.1
CDS CCA 72 bp GATCCGAACTGGCCGAGATGGGATCTGAGGCGGGGCTaGGAAGAGGTCACTGTTGGCAAACACGCTCTGGGG +
Preference number: 6 (lower is better)
Translates to: DPNWPRWDLRRG*EEVTVGKHALG
Trigger: CCCCAGAGCGTGTTTGCCAACAGTGACCTCTTCCCAGCCCCGCCTCAGATCCCATCTCGGCCAGTTCGGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
ENST00000585892.5
ENST00000589106.1
ENST00000590806.5
ENST00000593203.1
ENST00000681972.1
CDS CCA 72 bp GCCAGCCCCTGCGGATCACCAGGATCTCCCCCTGATTaGGGATGGCTCTCTTCTTGTTCAGCTGCGTGCTCC +
Preference number: 6 (lower is better)
Translates to: ASPCGSPGSPPD*GWLSSCSAACS
Trigger: GGAGCACGCAGCTGAACAAGAAGAGAGCCATCCCCAATCAGGGGGAGATCCTGGTGATCCGCAGGGGCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355667.11
ENST00000389253.9
ENST00000585892.5
CDS CCA 72 bp CTCCTGCCTCCAGCCGGGGTTAGTGTTGGTCAGAGCTaGAGCACAGGGCCCACGCTACACTTTGGGGTGCAT +
Preference number: 6 (lower is better)
Translates to: LLPPAGVSVGQS*STGPTLHFGVH
Trigger: ATGCACCCCAAAGTGTAGCGTGGGCCCTGTGCTCCAGCTCTGACCAACACTAACCCCGGCTGGAGGCAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS CCA 72 bp GGACTCTCACAGTTGTTTGGAGCAGGCAGTGACCCCTaGCATCTGGCCATTCACGGGCTGCCTGGTGGTGGG +
Preference number: 6 (lower is better)
Translates to: GLSQLFGAGSDP*HLAIHGLPGGG
Trigger: CCCACCACCAGGCAGCCCGTGAATGGCCAGATGCCAGGGGTCACTGCCTGCTCCAAACAACTGTGAGAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS CCA 72 bp AGTCTCCTTCCGTCCTCAGCGGGCAGGGAACACCTCTaGCTTGTAGAAGGGACGGCTCAGTGGCTGCACCGA +
Preference number: 6 (lower is better)
Translates to: SLLPSSAGREHL*LVEGTAQWLHR
Trigger: TCGGTGCAGCCACTGAGCCGTCCCTTCTACAAGCCAGAGGTGTTCCCTGCCCGCTGAGGACGGAAGGAGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593203.1
CDS CCA 72 bp GGGGCCTGGCCGCTGGCTCTCTTACCTCTACCTGCCTaGTCTGGTAGCCTTCCTTCCCTGGGTCCAATTCTC +
Preference number: 6 (lower is better)
Translates to: GAWPLALLPLPA*SGSLPSLGPIL
Trigger: GAGAATTGGACCCAGGGAAGGAAGGCTACCAGACCAGGCAGGTAGAGGTAAGAGAGCCAGCGGCCAGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683738.1
CDS CAA 90 bp TGCGGGGCAGGGCCTAACAAGGAAACCTGGGCCCTCCAAGCCAGGTaGAGGTCTGGTAACAGAATGCCAGGAAGGGGGCCTGGAAGACCA +
Preference number: 6 (lower is better)
Translates to: CGAGPNKETWALQAR*RSGNRMPGRGPGRP
Trigger: TGGTCTTCCAGGCCCCCTTCCTGGCATTCTGTTACCAGACCTCAACCTGGCTTGGAGGGCCCAGGTTTCCTTGTTAGGCCCTGCCCCGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593203.1
CDS TCA 72 bp CCTTCGTTCTCCCCTCCCGTTCCCGGATGTAAGTGGTaGCGATTCGCTCTGTCTCCTCTCGCAACCGGGGGT +
Preference number: 6 (lower is better)
Translates to: PSFSPPVPGCKW*RFALSPLATGG
Trigger: ACCCCCGGTTGCGAGAGGAGACAGAGCGAATCGTCACCACTTACATCCGGGAACGGGAGGGGAGAACGAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
ENST00000585892.5
ENST00000587329.1
ENST00000587830.2
ENST00000682285.1
ENST00000683738.1
CDS TCA 72 bp AGGGAGACAGGCTGTCGGTGCTCCCCCAGAGAAATGTaGGGCCTCCATACTCCTAGGCCTGGCCCGGTTTCT +
Preference number: 6 (lower is better)
Translates to: RETGCRCSPREM*GLHTPRPGPVS
Trigger: AGAAACCGGGCCAGGCCTAGGAGTATGGAGGCCTCACATTTCTCTGGGGGAGCACCGACAGCCTGTCTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS GCA 72 bp TCAACTTCTGGTCAGCTGTCAACGTGGCGGTGCTGCTaGTGGTGGCTGTGCTGCAGGTCTGCACGCTCAAGC +
Preference number: 6 (lower is better)
Translates to: STSGQLSTWRCC*WWLCCRSARSS
Trigger: GCTTGAGCGTGCAGACCTGCAGCACAGCCACCAGCAGCAGCACCGCCACGTTGACAGCTGACCAGAAGTTGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591818.1
ENST00000593203.1
CDS GCA 72 bp AGGGGGTGCAGCAGCTGGCTGGCTTCCCCCTCTCCCTaGAGATCTGAACATAGCACTGCCCTCTCCCTAAAC +
Preference number: 6 (lower is better)
Translates to: RGCSSWLASPSP*RSEHSTALSLN
Trigger: GTTTAGGGAGAGGGCAGTGCTATGTTCAGATCTGCAGGGAGAGGGGGAAGCCAGCCAGCTGCTGCACCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000682285.1
ENST00000683738.1
CDS CCA 72 bp GTTGGTCAGTTGCTGATTCAGCGTCTTCTGCAGATGTaGCGTGCCCATGCGGTCGGCCATGTGCCGGTAGGC +
Preference number: 6 (lower is better)
Translates to: VGQLLIQRLLQM*RAHAVGHVPVG
Trigger: GCCTACCGGCACATGGCCGACCGCATGGGCACGCCACATCTGCAGAAGACGCTGAATCAGCAACTGACCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
ENST00000585892.5
ENST00000587485.1
ENST00000587830.2
ENST00000591701.5
ENST00000682285.1
ENST00000682524.1
ENST00000683738.1
CDS CCA 72 bp GCACCAAGTGGGCACCTACTTGGAGCAATAAGAGATTaGAGCCTGGTCGGGCGCAGGGGCTCACCCCTGTCA +
Preference number: 6 (lower is better)
Translates to: APSGHLLGAIRD*SLVGRRGSPLS
Trigger: TGACAGGGGTGAGCCCCTGCGCCCGACCAGGCTCCAATCTCTTATTGCTCCAAGTAGGTGCCCACTTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591266.1
CDS CCA 72 bp CCTGGCATAGGATCGGCTCAGCTACAAGAAAGACCCTaGGATTGCCAGAAGAGCCCCGCCAGAGGGCAGTGG +
Preference number: 6 (lower is better)
Translates to: PGIGSAQLQERP*DCQKSPARGQW
Trigger: CCACTGCCCTCTGGCGGGGCTCTTCTGGCAATCCCAGGGTCTTTCTTGTAGCTGAGCCGATCCTATGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS CCA 72 bp TATCTGCACACCCAGGCCCTGGGAGCAGCGAGGCCCTaGCATAGGATCGGCTCAGCTACAAGAAAGACCCTG +
Preference number: 6 (lower is better)
Translates to: YLHTQALGAARP*HRIGSATRKTL
Trigger: CAGGGTCTTTCTTGTAGCTGAGCCGATCCTATGCCAGGGCCTCGCTGCTCCCAGGGCCTGGGTGTGCAGATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS CCA 72 bp ACTTGGAGCGGGTCAACTTCTGGTCAGCTGTCAACGTaGCGGTGCTGCTGCTGGTGGCTGTGCTGCAGGTCT +
Preference number: 6 (lower is better)
Translates to: TWSGSTSGQLST*RCCCWWLCCRS
Trigger: AGACCTGCAGCACAGCCACCAGCAGCAGCACCGCCACGTTGACAGCTGACCAGAAGTTGACCCGCTCCAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591818.1
ENST00000593203.1
CDS CCA 72 bp TCCCCAAGGGCACACTCACGCATGTTAGGTGAGAAATaGAGGTTCTGCCTGCCCGGCTGCCACAGGCTTCCC +
Preference number: 6 (lower is better)
Translates to: SPRAHSRMLGEK*RFCLPGCHRLP
Trigger: GGGAAGCCTGTGGCAGCCGGGCAGGCAGAACCTCCATTTCTCACCTAACATGCGTGAGTGTGCCCTTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587991.5
CDS CCA 72 bp GGAACTGAGCTGGGGGAACAAGCAGAGTGGTCGCATTaGCGGGGTCCTCGTGGCACGGGAAGCAACATGAAC +
Preference number: 6 (lower is better)
Translates to: GTELGEQAEWSH*RGPRGTGSNMN
Trigger: GTTCATGTTGCTTCCCGTGCCACGAGGACCCCGCCAATGCGACCACTCTGCTTGTTCCCCCAGCTCAGTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587329.1
CDS CCA 72 bp GTTGCCTGGTGCGGGGCAGGGCCTAACAAGGAAACCTaGGCCCTCCAAGCCAGGTTGAGGTCTGGTAACAGA +
Preference number: 6 (lower is better)
Translates to: VAWCGAGPNKET*ALQARLRSGNR
Trigger: TCTGTTACCAGACCTCAACCTGGCTTGGAGGGCCCAGGTTTCCTTGTTAGGCCCTGCCCCGCACCAGGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593203.1
CDS CCA 72 bp CTTAGCCTAAGCCTCCCATCCTGTGTTAGCGTTGCCTaGTGCGGGGCAGGGCCTAACAAGGAAACCTGGGCC +
Preference number: 6 (lower is better)
Translates to: LSLSLPSCVSVA*CGAGPNKETWA
Trigger: GGCCCAGGTTTCCTTGTTAGGCCCTGCCCCGCACCAGGCAACGCTAACACAGGATGGGAGGCTTAGGCTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593203.1
CDS CCA 72 bp CTCAGTGGCTGCACCGACGGTCCTGGAAATCTCACATaGTGGGCACTGCAGCGTTGGAACGTGAGCCTCGGA +
Preference number: 6 (lower is better)
Translates to: LSGCTDGPGNLT*WALQRWNVSLG
Trigger: TCCGAGGCTCACGTTCCAACGCTGCAGTGCCCACCATGTGAGATTTCCAGGACCGTCGGTGCAGCCACTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593203.1
CDS CCA 72 bp GGCACTACCTTCACCAGCTCAAATGGGAACCGCTCGTaGAAGATGCGATTGATTCGGGCGCCCCCGGAGAGC +
Preference number: 6 (lower is better)
Translates to: GTTFTSSNGNRS*KMRLIRAPPES
Trigger: GCTCTCCGGGGGCGCCCGAATCAATCGCATCTTCCACGAGCGGTTCCCATTTGAGCTGGTGAAGGTAGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682524.1
CDS CAA 72 bp AGCACCAAGTGGGCACCTACTTGGAGCAATAAGAGATaGGAGCCTGGTCGGGCGCAGGGGCTCACCCCTGTC +
Preference number: 6 (lower is better)
Translates to: STKWAPTWSNKR*EPGRAQGLTPV
Trigger: GACAGGGGTGAGCCCCTGCGCCCGACCAGGCTCCAATCTCTTATTGCTCCAAGTAGGTGCCCACTTGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591266.1
CDS CAA 72 bp CATAGGATCGGCTCAGCTACAAGAAAGACCCTGGGATaGCCAGAAGAGCCCCGCCAGAGGGCAGTGGCAGGG +
Preference number: 6 (lower is better)
Translates to: HRIGSATRKTLG*PEEPRQRAVAG
Trigger: CCCTGCCACTGCCCTCTGGCGGGGCTCTTCTGGCAATCCCAGGGTCTTTCTTGTAGCTGAGCCGATCCTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS CAA 72 bp ATGTCCATGCCACCAGGGAAGGGACGCCCATCTGCCTaGGTCATTGCTGTGTCCCCAAGGGCACACTCACGC +
Preference number: 6 (lower is better)
Translates to: MSMPPGKGRPSA*VIAVSPRAHSR
Trigger: GCGTGAGTGTGCCCTTGGGGACACAGCAATGACCAAGGCAGATGGGCGTCCCTTCCCTGGTGGCATGGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587991.5
CDS TCA 72 bp GCGCCTTCAAGGGTGGCGGTCCAGTTAGTGCCTGTGTaGGTCGACTTATACCCAGGGCAACGTGCAGTCCAG +
Preference number: 6 (lower is better)
Translates to: APSRVAVQLVPV*VDLYPGQRAVQ
Trigger: CTGGACTGCACGTTGCCCTGGGTATAAGTCGACTCACACAGGCACTAACTGGACCGCCACCCTTGAAGGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590806.5
CDS TCA 72 bp CACCAAGCCTTGGGGCAGGACGTCTGGCAGAAGCCCTaGGGTGCCCTTCTCCACACGGGTTCAGAGACAAAA +
Preference number: 6 (lower is better)
Translates to: HQALGQDVWQKP*GALLHTGSETK
Trigger: TTTTGTCTCTGAACCCGTGTGGAGAAGGGCACCTCAGGGCTTCTGCCAGACGTCCTGCCCCAAGGCTTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS TCA 72 bp GGAATGAAGGTTGTGTCATGTGTGGGGTCGGATGCCTaGGTCCACTGCCCGGAAACCCTCAGGGTGACCCGA +
Preference number: 6 (lower is better)
Translates to: GMKVVSCVGSDA*VHCPETLRVTR
Trigger: TCGGGTCACCCTGAGGGTTTCCGGGCAGTGGACTCAGGCATCCGACCCCACACATGACACAACCTTCATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593220.1
CDS TCA 72 bp AGGCTTCACCTGGTCATGCTGAGGGGTCACCGTGAGTaGCGCCTACACAGAAGAGCGCTGTGCACAAGCTCG +
Preference number: 6 (lower is better)
Translates to: RLHLVMLRGHRE*RLHRRALCTSS
Trigger: CGAGCTTGTGCACAGCGCTCTTCTGTGTAGGCGTCACTCACGGTGACCCCTCAGCATGACCAGGTGAAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593203.1
CDS TCA 72 bp ACCCAGGCTTCACCTGGTCATGCTGAGGGGTCACCGTaGGTGACGCCTACACAGAAGAGCGCTGTGCACAAG +
Preference number: 6 (lower is better)
Translates to: TQASPGHAEGSP*VTPTQKSAVHK
Trigger: CTTGTGCACAGCGCTCTTCTGTGTAGGCGTCACTCACGGTGACCCCTCAGCATGACCAGGTGAAGCCTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593203.1
CDS TCA 72 bp GGCCTAACAAGGAAACCTGGGCCCTCCAAGCCAGGTTaGGGTCTGGTAACAGAATGCCAGGAAGGGGGCCTG +
Preference number: 6 (lower is better)
Translates to: GLTRKPGPSKPG*GLVTECQEGGL
Trigger: CAGGCCCCCTTCCTGGCATTCTGTTACCAGACCTCAACCTGGCTTGGAGGGCCCAGGTTTCCTTGTTAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593203.1
CDS GCA 72 bp AGCCTTGGGGCAGGACGTCTGGCAGAAGCCCTGAGGTaGCCTTCTCCACACGGGTTCAGAGACAAAATCCCA +
Preference number: 6 (lower is better)
Translates to: SLGAGRLAEALR*PSPHGFRDKIP
Trigger: TGGGATTTTGTCTCTGAACCCGTGTGGAGAAGGGCACCTCAGGGCTTCTGCCAGACGTCCTGCCCCAAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS GCA 72 bp GGGCACAAGCTTGACCCTGCCATGGGTCTGGCAGACTaGCGAGAGGAATGGGCTCTAGGGGTCTTTCTGACT +
Preference number: 6 (lower is better)
Translates to: GHKLDPAMGLAD*REEWALGVFLT
Trigger: AGTCAGAAAGACCCCTAGAGCCCATTCCTCTCGGCAGTCTGCCAGACCCATGGCAGGGTCAAGCTTGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593203.1
CDS CCA 72 bp AACCTGCAAGAGGGCAACTTGGAGCGGGTCAACTTCTaGTCAGCTGTCAACGTGGCGGTGCTGCTGCTGGTG +
Preference number: 6 (lower is better)
Translates to: NLQEGNLERVNF*SAVNVAVLLLV
Trigger: CACCAGCAGCAGCACCGCCACGTTGACAGCTGACCAGAAGTTGACCCGCTCCAAGTTGCCCTCTTGCAGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591818.1
ENST00000593203.1
CDS CCA 72 bp TCGAGGCACGTGACCGCAACCTGCAAGAGGGCAACTTaGAGCGGGTCAACTTCTGGTCAGCTGTCAACGTGG +
Preference number: 6 (lower is better)
Translates to: SRHVTATCKRAT*SGSTSGQLSTW
Trigger: CCACGTTGACAGCTGACCAGAAGTTGACCCGCTCCAAGTTGCCCTCTTGCAGGTTGCGGTCACGTGCCTCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591818.1
ENST00000593203.1
CDS CCA 72 bp GGAAACCCTCAGGGTGACCCGAGGACCCCACGGCGATaGAAGGGCAGACACCTGGAGCAACTACCTTTGTTA +
Preference number: 6 (lower is better)
Translates to: GNPQGDPRTPRR*KGRHLEQLPLL
Trigger: TAACAAAGGTAGTTGCTCCAGGTGTCTGCCCTTCCATCGCCGTGGGGTCCTCGGGTCACCCTGAGGGTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593220.1
CDS CCA 72 bp GACCCTGCCATGGGTCTGGCAGACTGCCGAGAGGAATaGGCTCTAGGGGTCTTTCTGACTGATCAGGAACCC +
Preference number: 6 (lower is better)
Translates to: DPAMGLADCREE*ALGVFLTDQEP
Trigger: GGGTTCCTGATCAGTCAGAAAGACCCCTAGAGCCCATTCCTCTCGGCAGTCTGCCAGACCCATGGCAGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593203.1
CDS CCA 72 bp GTAGAAGGGACGGCTCAGTGGCTGCACCGACGGTCCTaGAAATCTCACATGGTGGGCACTGCAGCGTTGGAA +
Preference number: 6 (lower is better)
Translates to: VEGTAQWLHRRS*KSHMVGTAALE
Trigger: TTCCAACGCTGCAGTGCCCACCATGTGAGATTTCCAGGACCGTCGGTGCAGCCACTGAGCCGTCCCTTCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593203.1
CDS CCA 72 bp AAGAAGGGGAAGAGGCGAATGTGGCCGTTCTCTCCCTaGGGACCAAGTGAGCAGCCACAGGTAGAGGCAGAG +
Preference number: 6 (lower is better)
Translates to: KKGKRRMWPFSP*GPSEQPQVEAE
Trigger: CTCTGCCTCTACCTGTGGCTGCTCACTTGGTCCCCAGGGAGAGAACGGCCACATTCGCCTCTTCCCCTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681972.1
CDS CCA 72 bp TACCTCTACCTGCCTGGTCTGGTAGCCTTCCTTCCCTaGGTCCAATTCTCTGGGTCCCCCTGGCATCACCTG +
Preference number: 6 (lower is better)
Translates to: YLYLPGLVAFLP*VQFSGSPWHHL
Trigger: CAGGTGATGCCAGGGGGACCCAGAGAATTGGACCCAGGGAAGGAAGGCTACCAGACCAGGCAGGTAGAGGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683738.1
CDS CAA 72 bp GGGCCTAACAAGGAAACCTGGGCCCTCCAAGCCAGGTaGAGGTCTGGTAACAGAATGCCAGGAAGGGGGCCT +
Preference number: 6 (lower is better)
Translates to: GPNKETWALQAR*RSGNRMPGRGP
Trigger: AGGCCCCCTTCCTGGCATTCTGTTACCAGACCTCAACCTGGCTTGGAGGGCCCAGGTTTCCTTGTTAGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593203.1
CDS CAA 72 bp CGGTCCTGGAAATCTCACATGGTGGGCACTGCAGCGTaGGAACGTGAGCCTCGGATTTCCTGGCCCCTCTAC +
Preference number: 6 (lower is better)
Translates to: RSWKSHMVGTAA*EREPRISWPLY
Trigger: GTAGAGGGGCCAGGAAATCCGAGGCTCACGTTCCAACGCTGCAGTGCCCACCATGTGAGATTTCCAGGACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593203.1
CDS CAA 90 bp AAGTGTAAGAGCCGGGCTGAGGCCGGCTGCCTAGAGGTGAGCTCCTaGAGCTGGGTTCAGTTCTCAGCTATGAGTAGCAGGCTGCTTCCC +
Preference number: 6 (lower is better)
Translates to: KCKSRAEAGCLEVSS*SWVQFSAMSSRLLP
Trigger: GGGAAGCAGCCTGCTACTCATAGCTGAGAACTGAACCCAGCTCAAGGAGCTCACCTCTAGGCAGCCGGCCTCAGCCCGGCTCTTACACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS CAA 90 bp CATCTTGGCCTCTTCCTCATCAGAGCCAGCTCACTTTGGATTGTATaGATGGGGCCAGGACCTGCGGCTCCAGCACCCCAGAGCCCAGCA +
Preference number: 6 (lower is better)
Translates to: HLGLFLIRASSLWIV*MGPGPAAPAPQSPA
Trigger: TGCTGGGCTCTGGGGTGCTGGAGCCGCAGGTCCTGGCCCCATCAATACAATCCAAAGTGAGCTGGCTCTGATGAGGAAGAGGCCAAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591819.1
CDS CAA 90 bp TGTCTGACACCTGCCCTCTCAGAGAATCCCAACTCAGTCACCTCCTaGGATCTGAGAGTGAGGATTGGTGCCGCCCGACCAGCCAGTCTC +
Preference number: 6 (lower is better)
Translates to: CLTPALSENPNSVTS*DLRVRIGAARPASL
Trigger: GAGACTGGCTGGTCGGGCGGCACCAATCCTCACTCTCAGATCCAAGGAGGTGACTGAGTTGGGATTCTCTGAGAGGGCAGGTGTCAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587329.1
ENST00000682285.1
ENST00000683738.1
CDS TCA 72 bp TCTGCCTTCACCCCAGGACCCCCGACAGAGACTGTCTaGCACCTGCCCTCTCAGAGAATCCCAACTCAGTCA +
Preference number: 6 (lower is better)
Translates to: SAFTPGPPTETV*HLPSQRIPTQS
Trigger: TGACTGAGTTGGGATTCTCTGAGAGGGCAGGTGTCAGACAGTCTCTGTCGGGGGTCCTGGGGTGAAGGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587329.1
ENST00000682285.1
ENST00000683738.1
CDS TCA 72 bp GAACCCAAACCCAACCCAGGCTTCACCTGGTCATGCTaGGGGGTCACCGTGAGTGACGCCTACACAGAAGAG +
Preference number: 6 (lower is better)
Translates to: EPKPNPGFTWSC*GVTVSDAYTEE
Trigger: CTCTTCTGTGTAGGCGTCACTCACGGTGACCCCTCAGCATGACCAGGTGAAGCCTGGGTTGGGTTTGGGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593203.1
CDS TCA 72 bp ATGCCTGAGACCACGCACACTGAATCGACATCCTGCTaGAATCAGGGCTCCCCGATGTGGGCCCTCATCTGG +
Preference number: 6 (lower is better)
Translates to: MPETTHTESTSC*NQGSPMWALIW
Trigger: CCAGATGAGGGCCCACATCGGGGAGCCCTGATTTCAGCAGGATGTCGATTCAGTGTGCGTGGTCTCAGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682285.1
ENST00000683738.1
CDS TCA 72 bp CTGCCCACCACAAGTTCAGGCCTAGAGGTAGGAGCTTaGGACCTTATTGCCTGGGAGGAGGCCTGGCTTGAG +
Preference number: 6 (lower is better)
Translates to: LPTTSSGLEVGA*DLIAWEEAWLE
Trigger: CTCAAGCCAGGCCTCCTCCCAGGCAATAAGGTCTCAAGCTCCTACCTCTAGGCCTGAACTTGTGGTGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682524.1
CDS GCA 72 bp TTGAATGTCCATGCCACCAGGGAAGGGACGCCCATCTaGCTTGGTCATTGCTGTGTCCCCAAGGGCACACTC +
Preference number: 6 (lower is better)
Translates to: LNVHATREGTPI*LGHCCVPKGTL
Trigger: GAGTGTGCCCTTGGGGACACAGCAATGACCAAGGCAGATGGGCGTCCCTTCCCTGGTGGCATGGACATTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587991.5
CDS GCA 72 bp AGCCCAGGAGAGCTTCCAGATATTCTCAGTTGGCTCTaGCTTCACCCCAGGACCCCCGACAGAGACTGTCTG +
Preference number: 6 (lower is better)
Translates to: SPGELPDILSWL*LHPRTPDRDCL
Trigger: CAGACAGTCTCTGTCGGGGGTCCTGGGGTGAAGGCAGAGCCAACTGAGAATATCTGGAAGCTCTCCTGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587329.1
ENST00000682285.1
ENST00000683738.1
CDS CCA 72 bp AACTCCATCTTCACCAGCTCAAATGGGAACCGCTCGTaGAAGATGCGATTGATTCGGGCGCCCCCGGAGAGC +
Preference number: 6 (lower is better)
Translates to: NSIFTSSNGNRS*KMRLIRAPPES
Trigger: GCTCTCCGGGGGCGCCCGAATCAATCGCATCTTCCACGAGCGGTTCCCATTTGAGCTGGTGAAGATGGAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
ENST00000585892.5
ENST00000587830.2
ENST00000591701.5
ENST00000682285.1
ENST00000683738.1
CDS CCA 72 bp GATCAGCTAAGGCCCAGCACCAAGTGGGCACCTACTTaGAGCAATAAGAGATTGGAGCCTGGTCGGGCGCAG +
Preference number: 6 (lower is better)
Translates to: DQLRPSTKWAPT*SNKRLEPGRAQ
Trigger: CTGCGCCCGACCAGGCTCCAATCTCTTATTGCTCCAAGTAGGTGCCCACTTGGTGCTGGGCCTTAGCTGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591266.1
CDS CCA 72 bp CTGACCTACAGGAAACCAGGAAAACCTGCCAGGAACTaGCTGCAGAAGTGCGCCTTCAAGGGTGGCGGTCCA +
Preference number: 6 (lower is better)
Translates to: LTYRKPGKPARN*LQKCAFKGGGP
Trigger: TGGACCGCCACCCTTGAAGGCGCACTTCTGCAGCCAGTTCCTGGCAGGTTTTCCTGGTTTCCTGTAGGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590806.5
CDS CCA 72 bp GCTGAGGCCGGCTGCCTAGAGGTGAGCTCCTTGAGCTaGGTTCAGTTCTCAGCTATGAGTAGCAGGCTGCTT +
Preference number: 6 (lower is better)
Translates to: AEAGCLEVSSLS*VQFSAMSSRLL
Trigger: AAGCAGCCTGCTACTCATAGCTGAGAACTGAACCCAGCTCAAGGAGCTCACCTCTAGGCAGCCGGCCTCAGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS CCA 72 bp AGCATCCCCTCTGGGAACGCAGTGACGAGCTCTTCCTaGTCTGTCCAGGACGTCCTGGTGTTAGCACCAAAG +
Preference number: 6 (lower is better)
Translates to: SIPSGNAVTSSS*SVQDVLVLAPK
Trigger: CTTTGGTGCTAACACCAGGACGTCCTGGACAGACCAGGAAGAGCTCGTCACTGCGTTCCCAGAGGGGATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS CCA 72 bp GGTCCTGGAAATCTCACATGGTGGGCACTGCAGCGTTaGAACGTGAGCCTCGGATTTCCTGGCCCCTCTACT +
Preference number: 6 (lower is better)
Translates to: GPGNLTWWALQR*NVSLGFPGPST
Trigger: AGTAGAGGGGCCAGGAAATCCGAGGCTCACGTTCCAACGCTGCAGTGCCCACCATGTGAGATTTCCAGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593203.1
CDS CCA 72 bp AGTGGCTGCACCGACGGTCCTGGAAATCTCACATGGTaGGCACTGCAGCGTTGGAACGTGAGCCTCGGATTT +
Preference number: 6 (lower is better)
Translates to: SGCTDGPGNLTW*ALQRWNVSLGF
Trigger: AAATCCGAGGCTCACGTTCCAACGCTGCAGTGCCCACCATGTGAGATTTCCAGGACCGTCGGTGCAGCCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593203.1
CDS CCA 72 bp AGGGAACACCTCTGGCTTGTAGAAGGGACGGCTCAGTaGCTGCACCGACGGTCCTGGAAATCTCACATGGTG +
Preference number: 6 (lower is better)
Translates to: REHLWLVEGTAQ*LHRRSWKSHMV
Trigger: CACCATGTGAGATTTCCAGGACCGTCGGTGCAGCCACTGAGCCGTCCCTTCTACAAGCCAGAGGTGTTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593203.1
CDS CAA 72 bp TTCGAGGCACGTGACCGCAACCTGCAAGAGGGCAACTaGGAGCGGGTCAACTTCTGGTCAGCTGTCAACGTG +
Preference number: 6 (lower is better)
Translates to: FEARDRNLQEGN*ERVNFWSAVNV
Trigger: CACGTTGACAGCTGACCAGAAGTTGACCCGCTCCAAGTTGCCCTCTTGCAGGTTGCGGTCACGTGCCTCGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591818.1
ENST00000593203.1
CDS CAA 72 bp CTCTTCCTCATCAGAGCCAGCTCACTTTGGATTGTATaGATGGGGCCAGGACCTGCGGCTCCAGCACCCCAG +
Preference number: 6 (lower is better)
Translates to: LFLIRASSLWIV*MGPGPAAPAPQ
Trigger: CTGGGGTGCTGGAGCCGCAGGTCCTGGCCCCATCAATACAATCCAAAGTGAGCTGGCTCTGATGAGGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591819.1
CDS CAA 90 bp CTGCACCGACGGTCCTGGAAATCTCACATGGTGGGCACTGCAGCGTaGGAACGTGAGCCTCGGATTTCCTGGCCCCTCTACTGTAAATGT +
Preference number: 6 (lower is better)
Translates to: LHRRSWKSHMVGTAA*EREPRISWPLYCKC
Trigger: ACATTTACAGTAGAGGGGCCAGGAAATCCGAGGCTCACGTTCCAACGCTGCAGTGCCCACCATGTGAGATTTCCAGGACCGTCGGTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593203.1
CDS TCA 72 bp CAAGCTGGCTGCAAGCCTGGTGGTCATCCTTTTGACTaGCACATCAGGGTTTCAGGCTGGGAGACCCCATGG +
Preference number: 6 (lower is better)
Translates to: QAGCKPGGHPFD*HIRVSGWETPW
Trigger: CCATGGGGTCTCCCAGCCTGAAACCCTGATGTGTCAGTCAAAAGGATGACCACCAGGCTTGCAGCCAGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS TCA 72 bp TCTTCCTCATCAGAGCCAGCTCACTTTGGATTGTATTaGTGGGGCCAGGACCTGCGGCTCCAGCACCCCAGA +
Preference number: 6 (lower is better)
Translates to: SSSSEPAHFGLY*WGQDLRLQHPR
Trigger: TCTGGGGTGCTGGAGCCGCAGGTCCTGGCCCCATCAATACAATCCAAAGTGAGCTGGCTCTGATGAGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591819.1
CDS TCA 72 bp CAGGCAGCATTTCCCAAAGAGCAGCTTCCGGAGCCCTaGGCCCATGAGATGCTGTCCATGAAGTGGCAGAGT +
Preference number: 6 (lower is better)
Translates to: QAAFPKEQLPEP*AHEMLSMKWQS
Trigger: ACTCTGCCACTTCATGGACAGCATCTCATGGGCTCAGGGCTCCGGAAGCTGCTCTTTGGGAAATGCTGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682285.1
ENST00000683738.1
CDS GCA 72 bp ACAAGGAATGAAGGTTGTGTCATGTGTGGGGTCGGATaGCTGAGTCCACTGCCCGGAAACCCTCAGGGTGAC +
Preference number: 6 (lower is better)
Translates to: TRNEGCVMCGVG*LSPLPGNPQGD
Trigger: GTCACCCTGAGGGTTTCCGGGCAGTGGACTCAGGCATCCGACCCCACACATGACACAACCTTCATTCCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593220.1
CDS GCA 72 bp CAAAAACTCGGCATGTTCTCCTCCTACTCCCAGGTCTaGCTGGCTACCACCTCTCCCAGGAAGACTTCCCTG +
Preference number: 6 (lower is better)
Translates to: QKLGMFSSYSQV*LATTSPRKTSL
Trigger: CAGGGAAGTCTTCCTGGGAGAGGTGGTAGCCAGGCAGACCTGGGAGTAGGAGGAGAACATGCCGAGTTTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591819.1
CDS GCA 72 bp CACAGTGATGGCTGGGTGACAGTGAGGTTCCAGAGGTaGTATTTCCTAAGGGCCTCCTGGCTCCCATCCTTG +
Preference number: 6 (lower is better)
Translates to: HSDGWVTVRFQR*YFLRASWLPSL
Trigger: CAAGGATGGGAGCCAGGAGGCCCTTAGGAAATAGCACCTCTGGAACCTCACTGTCACCCAGCCATCACTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683738.1
CDS CCA 72 bp CAGAGACAAAATCCCACCCTAGGGAGCTGCAAGCTGTaGGTGGCAAACAAAGGCCCGTTAGCCATCCACCAC +
Preference number: 6 (lower is better)
Translates to: QRQNPTLGSCKL*VANKGPLAIHH
Trigger: GTGGTGGATGGCTAACGGGCCTTTGTTTGCCACCCACAGCTTGCAGCTCCCTAGGGTGGGATTTTGTCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS CCA 72 bp CTAACCATGGGGATGCCTCACAGAAGGCGTGTTGGTTaGGGACAGTGGACCACTATCAGCCCAGGAGAGCTT +
Preference number: 6 (lower is better)
Translates to: LTMGMPHRRRVG*GQWTTISPGEL
Trigger: AAGCTCTCCTGGGCTGATAGTGGTCCACTGTCCCCAACCAACACGCCTTCTGTGAGGCATCCCCATGGTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587329.1
ENST00000682285.1
ENST00000683738.1
CDS CCA 72 bp GTGAGGTTCCAGAGGTGCTATTTCCTAAGGGCCTCCTaGCTCCCATCCTTGCCAGGGCTCCCTCAAATAGCA +
Preference number: 6 (lower is better)
Translates to: VRFQRCYFLRAS*LPSLPGLPQIA
Trigger: TGCTATTTGAGGGAGCCCTGGCAAGGATGGGAGCCAGGAGGCCCTTAGGAAATAGCACCTCTGGAACCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683738.1
CDS CAA 72 bp CGAACCACCCACCGTGCCCGGCAAGGCATTTTAATATaGGGGCCAAGGGTGGCCATGTTCACTCTACCTCAG +
Preference number: 6 (lower is better)
Translates to: RTTHRARQGILI*GPRVAMFTLPQ
Trigger: CTGAGGTAGAGTGAACATGGCCACCCTTGGCCCCAATATTAAAATGCCTTGCCGGGCACGGTGGGTGGTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590787.1
CDS CAA 72 bp GCATCTTGGCCTCTTCCTCATCAGAGCCAGCTCACTTaGGATTGTATTGATGGGGCCAGGACCTGCGGCTCC +
Preference number: 6 (lower is better)
Translates to: ASWPLPHQSQLT*DCIDGARTCGS
Trigger: GGAGCCGCAGGTCCTGGCCCCATCAATACAATCCAAAGTGAGCTGGCTCTGATGAGGAAGAGGCCAAGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591819.1
CDS TCA 72 bp GGGAGGCAGGGGCGGTGTGTAAGTATTTGCCATCCCTaGCCTACAGGAAACCAGGAAAACCTGCCAGGAACT +
Preference number: 6 (lower is better)
Translates to: GRQGRCVSICHP*PTGNQENLPGT
Trigger: AGTTCCTGGCAGGTTTTCCTGGTTTCCTGTAGGTCAGGGATGGCAAATACTTACACACCGCCCCTGCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590806.5
CDS TCA 72 bp AATTTCATTGGCCCTGGCCGGGTCCCCAACAAGGAATaGAGGTTGTGTCATGTGTGGGGTCGGATGCCTGAG +
Preference number: 6 (lower is better)
Translates to: NFIGPGRVPNKE*RLCHVWGRMPE
Trigger: CTCAGGCATCCGACCCCACACATGACACAACCTTCATTCCTTGTTGGGGACCCGGCCAGGGCCAATGAAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593220.1
CDS GCA 72 bp TTTGCCATCCCTGACCTACAGGAAACCAGGAAAACCTaGCAGGAACTGGCTGCAGAAGTGCGCCTTCAAGGG +
Preference number: 6 (lower is better)
Translates to: FAIPDLQETRKT*QELAAEVRLQG
Trigger: CCCTTGAAGGCGCACTTCTGCAGCCAGTTCCTGGCAGGTTTTCCTGGTTTCCTGTAGGTCAGGGATGGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590806.5
CDS GCA 72 bp AAAGGGAGCAGCCAGGCCTCAGCAGAAAGTCAGGTTTaGATCCAAGGGACACATCCCAATGGGACTGGGCTT +
Preference number: 6 (lower is better)
Translates to: KGSSQASAESQV*IQGTHPNGTGL
Trigger: AAGCCCAGTCCCATTGGGATGTGTCCCTTGGATGCAAACCTGACTTTCTGCTGAGGCCTGGCTGCTCCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS GCA 72 bp ATGTTAGGTGAGAAATGGAGGTTCTGCCTGCCCGGCTaGCACAGGCTTCCCCAGCAAGCTGAATCTAGGTGT +
Preference number: 6 (lower is better)
Translates to: MLGEKWRFCLPG*HRLPQQAESRC
Trigger: ACACCTAGATTCAGCTTGCTGGGGAAGCCTGTGGCAGCCGGGCAGGCAGAACCTCCATTTCTCACCTAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587991.5
CDS CCA 72 bp TGCCTCCCTGGAGATCAGCTAAGGCCCAGCACCAAGTaGGCACCTACTTGGAGCAATAAGAGATTGGAGCCT +
Preference number: 6 (lower is better)
Translates to: CLPGDQLRPSTK*APTWSNKRLEP
Trigger: AGGCTCCAATCTCTTATTGCTCCAAGTAGGTGCCCACTTGGTGCTGGGCCTTAGCTGATCTCCAGGGAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591266.1
CDS CCA 72 bp CCCAGGGCAACGTGCAGTCCAGCGCCGGCTGCGGCATaGGGTTTCCAGGTTAGCTCGATTTTTAGTATTTTT +
Preference number: 6 (lower is better)
Translates to: PRATCSPAPAAA*GFQVSSIFSIF
Trigger: AAAAATACTAAAAATCGAGCTAACCTGGAAACCCCATGCCGCAGCCGGCGCTGGACTGCACGTTGCCCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590806.5
CDS CCA 72 bp GGGAGAGGTGCCGGTCATCTATCCTGTAGGGTCTTGTaGGATGTGACTGCTCTTCATCCTCGCCAGATCTCT +
Preference number: 6 (lower is better)
Translates to: GRGAGHLSCRVL*DVTALHPRQIS
Trigger: AGAGATCTGGCGAGGATGAAGAGCAGTCACATCCCACAAGACCCTACAGGATAGATGACCGGCACCTCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587485.1
ENST00000591118.1
CDS CCA 72 bp TCCGGATCGAGGGGCAGGAAGTGTGACCACATGTGGTaGAGCAACTCTGTCTTGCAATTTGGGCGACTCTGT +
Preference number: 6 (lower is better)
Translates to: SGSRGRKCDHMW*SNSVLQFGRLC
Trigger: ACAGAGTCGCCCAAATTGCAAGACAGAGTTGCTCCACCACATGTGGTCACACTTCCTGCCCCTCGATCCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588976.1
CDS CCA 72 bp GGGATGCCTCACAGAAGGCGTGTTGGTTGGGGACAGTaGACCACTATCAGCCCAGGAGAGCTTCCAGATATT +
Preference number: 6 (lower is better)
Translates to: GMPHRRRVGWGQ*TTISPGELPDI
Trigger: AATATCTGGAAGCTCTCCTGGGCTGATAGTGGTCCACTGTCCCCAACCAACACGCCTTCTGTGAGGCATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587329.1
ENST00000682285.1
ENST00000683738.1
CDS CCA 72 bp TTGTTTCTGTTGGATCAGCTGACTCTTCTCTTTTCCTaGGCCCCCAGAGGTGGGCATGTGACCCTCGACACC +
Preference number: 6 (lower is better)
Translates to: LFLLDQLTLLFS*APRGGHVTLDT
Trigger: GGTGTCGAGGGTCACATGCCCACCTCTGGGGGCCCAGGAAAAGAGAAGAGTCAGCTGATCCAACAGAAACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593203.1
CDS CCA 72 bp CATCTTGGCCTCTTCCTCATCAGAGCCAGCTCACTTTaGATTGTATTGATGGGGCCAGGACCTGCGGCTCCA +
Preference number: 6 (lower is better)
Translates to: HLGLFLIRASSL*IVLMGPGPAAP
Trigger: TGGAGCCGCAGGTCCTGGCCCCATCAATACAATCCAAAGTGAGCTGGCTCTGATGAGGAAGAGGCCAAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591819.1
CDS CCA 72 bp ACCTCTCCCAGGAAGACTTCCCTGAGTGGGGCATCTTaGCCTCTTCCTCATCAGAGCCAGCTCACTTTGGAT +
Preference number: 6 (lower is better)
Translates to: TSPRKTSLSGAS*PLPHQSQLTLD
Trigger: ATCCAAAGTGAGCTGGCTCTGATGAGGAAGAGGCCAAGATGCCCCACTCAGGGAAGTCTTCCTGGGAGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591819.1
CDS CCA 72 bp CCCACCAGGTCACCAGCTGCTCAGTATAGTAACAGCTaGGGTAAGTGGGAAGGCCCAGGAATCCAGAGGAAA +
Preference number: 6 (lower is better)
Translates to: PTRSPAAQYSNS*GKWEGPGIQRK
Trigger: TTTCCTCTGGATTCCTGGGCCTTCCCACTTACCCCAGCTGTTACTATACTGAGCAGCTGGTGACCTGGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682285.1
ENST00000683738.1
CDS CAA 72 bp CAAGGGAGAGGTGCCGGTCATCTATCCTGTAGGGTCTaGTGGGATGTGACTGCTCTTCATCCTCGCCAGATC +
Preference number: 6 (lower is better)
Translates to: QGRGAGHLSCRV*WDVTALHPRQI
Trigger: GATCTGGCGAGGATGAAGAGCAGTCACATCCCACAAGACCCTACAGGATAGATGACCGGCACCTCTCCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587485.1
ENST00000591118.1
CDS TCA 72 bp CTCGGGAGCCATGTCAATCGACTGGTACAAGATACCTaGAGCACTGTGGTGAGAATTCTGGGCGTGGCAGGA +
Preference number: 6 (lower is better)
Translates to: LGSHVNRLVQDT*STVVRILGVAG
Trigger: TCCTGCCACGCCCAGAATTCTCACCACAGTGCTTCAGGTATCTTGTACCAGTCGATTGACATGGCTCCCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS TCA 72 bp GCCAGTGAGTGGCAGGGTGAGGATTTGAACTTAGCCTaGACAAGTCTGTGTTTGCAGCTGTACCTCCCAGGG +
Preference number: 6 (lower is better)
Translates to: ASEWQGEDLNLA*TSLCLQLYLPG
Trigger: CCCTGGGAGGTACAGCTGCAAACACAGACTTGTTCAGGCTAAGTTCAAATCCTCACCCTGCCACTCACTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591818.1
ENST00000593203.1
CDS TCA 72 bp TTTCATCAACAGCATCTGAAGGAGGTGGCACTGAGCTaGGCCAACCTCCACAGTGATGGCTGGGTGACAGTG +
Preference number: 6 (lower is better)
Translates to: FHQQHLKEVALS*ANLHSDGWVTV
Trigger: CACTGTCACCCAGCCATCACTGTGGAGGTTGGCTCAGCTCAGTGCCACCTCCTTCAGATGCTGTTGATGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683738.1
CDS GCA 72 bp CCTGGCCTGTGCTCCCTTTTCTTTGTAGTGGGGTTGTaGATGTTTCTCTTGAGAAGCAAGGGAGAGGTGCCG +
Preference number: 6 (lower is better)
Translates to: PGLCSLFFVVGL*MFLLRSKGEVP
Trigger: CGGCACCTCTCCCTTGCTTCTCAAGAGAAACATGCACAACCCCACTACAAAGAAAAGGGAGCACAGGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587485.1
ENST00000591118.1
CDS GCA 72 bp TGCAGTGCAAAAACTCGGCATGTTCTTGAATGTCCATaGCACCAGGGAAGGGACGCCCATCTGCCTTGGTCA +
Preference number: 6 (lower is better)
Translates to: CSAKTRHVLECP*HQGRDAHLPWS
Trigger: TGACCAAGGCAGATGGGCGTCCCTTCCCTGGTGGCATGGACATTCAAGAACATGCCGAGTTTTTGCACTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587991.5
CDS GCA 72 bp CTCAGTCACCTCCTTGGATCTGAGAGTGAGGATTGGTaGCGCCCGACCAGCCAGTCTCTAAAAGTACCTACT +
Preference number: 6 (lower is better)
Translates to: LSHLLGSESEDW*RPTSQSLKVPT
Trigger: AGTAGGTACTTTTAGAGACTGGCTGGTCGGGCGGCACCAATCCTCACTCTCAGATCCAAGGAGGTGACTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587329.1
ENST00000682285.1
ENST00000683738.1
CDS CCA 72 bp AAAGACAAATGCAGCATCTCAGAAACCATGCGGCGCTaGCTAGACACTGAATCACCAGCAGCGGCGGTGACA +
Preference number: 6 (lower is better)
Translates to: KDKCSISETMRR*LDTESPAAAVT
Trigger: TGTCACCGCCGCTGCTGGTGATTCAGTGTCTAGCCAGCGCCGCATGGTTTCTGAGATGCTGCATTTGTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588976.1
CDS CCA 72 bp GGTTTTGCAACATTGCCCAGGCTGTTTTCGAACTCCTaGGCCCAAAGGATCTGCCCACATTGCCTCCCAAAG +
Preference number: 6 (lower is better)
Translates to: GFATLPRLFSNS*AQRICPHCLPK
Trigger: CTTTGGGAGGCAATGTGGGCAGATCCTTTGGGCCCAGGAGTTCGAAAACAGCCTGGGCAATGTTGCAAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590787.1
CDS CCA 72 bp CCCCTGCACACACAGAGCTGCGCAAGGGAAACGGCCTaGGCACACGGAACAAGTAAATGTATCTGGTTCAAT +
Preference number: 6 (lower is better)
Translates to: PLHTQSCARETA*AHGTSKCIWFN
Trigger: ATTGAACCAGATACATTTACTTGTTCCGTGTGCCCAGGCCGTTTCCCTTGCGCAGCTCTGTGTGTGCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681972.1
CDS GCA 72 bp ACAGCCAGAATGAGGCTGCTCTCCCGGCTGATGAACTaGAGGATCATGTCCTTGATCTGGTACTCGATGTCT +
Preference number: 6 (lower is better)
Translates to: TARMRLLSRLMN*RIMSLIWYSMS
Trigger: AGACATCGAGTACCAGATCAAGGACATGATCCTGCAGTTCATCAGCCGGGAGAGCAGCCTCATTCTGGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000355667.11
ENST00000359692.10
ENST00000389253.9
ENST00000408974.8
ENST00000585892.5
ENST00000586939.5
ENST00000591819.1
ENST00000682285.1
ENST00000682524.1
ENST00000683738.1
CDS CCA 72 bp AGGTTCCTGGTCTTGGCCTGGCAAATTCAAAGGGACTaGGGGGAACACATGAGGAACCTGAAAACCACAAGC +
Preference number: 6 (lower is better)
Translates to: RFLVLAWQIQRD*GEHMRNLKTTS
Trigger: GCTTGTGGTTTTCAGGTTCCTCATGTGTTCCCCCCAGTCCCTTTGAATTTGCCAGGCCAAGACCAGGAACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS CCA 72 bp CGATGTGGGCCCTCATCTGGGTGCCACGGAAGGTTCTaGTTTAAATCTACAGTGTATGCCTTGAAGCTAGGG +
Preference number: 6 (lower is better)
Translates to: RCGPSSGCHGRF*FKSTVYALKLG
Trigger: CCCTAGCTTCAAGGCATACACTGTAGATTTAAACCAGAACCTTCCGTGGCACCCAGATGAGGGCCCACATCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682285.1
ENST00000683738.1
CDS CAA 90 bp GGCCTGTGCTCCCTTTTCTTTGTAGTGGGGTTGTGCATGTTTCTCTaGAGAAGCAAGGGAGAGGTGCCGGTCATCTATCCTGTAGGGTCT +
Preference number: 6 (lower is better)
Translates to: GLCSLFFVVGLCMFL*RSKGEVPVIYPVGS
Trigger: AGACCCTACAGGATAGATGACCGGCACCTCTCCCTTGCTTCTCAAGAGAAACATGCACAACCCCACTACAAAGAAAAGGGAGCACAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587485.1
ENST00000591118.1
CDS CAA 90 bp CCTCACCTACCTGGTGCCCAGCACGGAACAGATCCTCAATCAGCTTaGTCAGGTGCACCGATAAATGTTGTATCTGGTGACTCCATAGCC +
Preference number: 6 (lower is better)
Translates to: PHLPGAQHGTDPQSA*SGAPINVVSGDSIA
Trigger: GGCTATGGAGTCACCAGATACAACATTTATCGGTGCACCTGACAAAGCTGATTGAGGATCTGTTCCGTGCTGGGCACCAGGTAGGTGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682285.1
ENST00000683738.1
CDS TCA 72 bp TCAATCGACTGGTACAAGATACCTGAAGCACTGTGGTaGGAATTCTGGGCGTGGCAGGAAACGGTGCTAGGA +
Preference number: 6 (lower is better)
Translates to: SIDWYKIPEALW*EFWAWQETVLG
Trigger: TCCTAGCACCGTTTCCTGCCACGCCCAGAATTCTCACCACAGTGCTTCAGGTATCTTGTACCAGTCGATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS TCA 72 bp GGAGGTGTTACCCACAGCAGGGATGGACAGCAAATATaGTTCATCTCGGGAGCCATGTCAATCGACTGGTAC +
Preference number: 6 (lower is better)
Translates to: GGVTHSRDGQQI*FISGAMSIDWY
Trigger: GTACCAGTCGATTGACATGGCTCCCGAGATGAATCATATTTGCTGTCCATCCCTGCTGTGGGTAACACCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS TCA 72 bp CTGGGGCTTGTGTGTGGGGCTGTGGCACATGAAATGTaGCATCTGAGGAACTGCACTTGTTTGCGTGAGATA +
Preference number: 6 (lower is better)
Translates to: LGLVCGAVAHEM*HLRNCTCLREI
Trigger: TATCTCACGCAAACAAGTGCAGTTCCTCAGATGTCACATTTCATGTGCCACAGCCCCACACACAAGCCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590787.1
ENST00000590806.5
CDS TCA 72 bp AATTACTCTTGCGTCCGGATCGAGGGGCAGGAAGTGTaGCCACATGTGGTGGAGCAACTCTGTCTTGCAATT +
Preference number: 6 (lower is better)
Translates to: NYSCVRIEGQEV*PHVVEQLCLAI
Trigger: AATTGCAAGACAGAGTTGCTCCACCACATGTGGTCACACTTCCTGCCCCTCGATCCGGACGCAAGAGTAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588976.1
CDS TCA 72 bp CTGCACCTGGCCCTTCTTCCTACTCTTCTCATCATTTaGTCCCAACACCAGCCTGTAAGTGGCTCTAACCAC +
Preference number: 6 (lower is better)
Translates to: LHLALLPTLLII*SQHQPVSGSNH
Trigger: GTGGTTAGAGCCACTTACAGGCTGGTGTTGGGATCAAATGATGAGAAGAGTAGGAAGAAGGGCCAGGTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681972.1
CDS CAA 72 bp AATCCCGGAGTTTCTAAGGGGAAGTGTGAGAAGGTGTaGCCTAAGATGAGTGCAGTGGCGCAATCACAGCTC +
Preference number: 6 (lower is better)
Translates to: NPGVSKGKCEKV*PKMSAVAQSQL
Trigger: GAGCTGTGATTGCGCCACTGCACTCATCTTAGGCAACACCTTCTCACACTTCCCCTTAGAAACTCCGGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681972.1
CDS CAA 72 bp CCTGGTGCCCAGCACGGAACAGATCCTCAATCAGCTTaGTCAGGTGCACCGATAAATGTTGTATCTGGTGAC +
Preference number: 6 (lower is better)
Translates to: PGAQHGTDPQSA*SGAPINVVSGD
Trigger: GTCACCAGATACAACATTTATCGGTGCACCTGACAAAGCTGATTGAGGATCTGTTCCGTGCTGGGCACCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682285.1
ENST00000683738.1
CDS CAA 90 bp AGGGGAGATAAGTCAGAGAGAAACAAAGCATGGTCAGCAATTTCATaGGCCCTGGCCGGGTCCCCAACAAGGAATGAAGGTTGTGTCATG +
Preference number: 6 (lower is better)
Translates to: RGDKSERNKAWSAIS*ALAGSPTRNEGCVM
Trigger: CATGACACAACCTTCATTCCTTGTTGGGGACCCGGCCAGGGCCAATGAAATTGCTGACCATGCTTTGTTTCTCTCTGACTTATCTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593220.1
CDS GCA 72 bp CACAAGGCAAAGAGTGCTAGATCAACTAGCCATGTCTaGCATGGGCACAAGAGGGCAAGATTTCTGCCATGT +
Preference number: 6 (lower is better)
Translates to: HKAKSARSTSHV*HGHKRARFLPC
Trigger: ACATGGCAGAAATCTTGCCCTCTTGTGCCCATGGCAGACATGGCTAGTTGATCTAGCACTCTTTGCCTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590806.5
CDS CCA 72 bp AGAGAAACAAAGCATGGTCAGCAATTTCATTGGCCCTaGCCGGGTCCCCAACAAGGAATGAAGGTTGTGTCA +
Preference number: 6 (lower is better)
Translates to: RETKHGQQFHWP*PGPQQGMKVVS
Trigger: TGACACAACCTTCATTCCTTGTTGGGGACCCGGCCAGGGCCAATGAAATTGCTGACCATGCTTTGTTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593220.1
CDS CCA 72 bp GGGTGGTGTGGCCTGGGCATTGGAGTCAATAAATTATaGTCAGAAAATCACAAGAGCCTGCTGATTGGGGCT +
Preference number: 6 (lower is better)
Translates to: GWCGLGIGVNKL*SENHKSLLIGA
Trigger: AGCCCCAATCAGCAGGCTCTTGTGATTTTCTGACCATAATTTATTGACTCCAATGCCCAGGCCACACCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593203.1
CDS CCA 72 bp CTGCGCCAGGCTTGGGCCCTGTTTATAATATACATTTaGAGGGCAATGGGAAGCCCAGAACATTCAAGCACA +
Preference number: 6 (lower is better)
Translates to: LRQAWALFIIYI*RAMGSPEHSST
Trigger: TGTGCTTGAATGTTCTGGGCTTCCCATTGCCCTCCAAATGTATATTATAAACAGGGCCCAAGCCTGGCGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683738.1
CDS CAA 72 bp AAGTCAGAGAGAAACAAAGCATGGTCAGCAATTTCATaGGCCCTGGCCGGGTCCCCAACAAGGAATGAAGGT +
Preference number: 6 (lower is better)
Translates to: KSERNKAWSAIS*ALAGSPTRNEG
Trigger: ACCTTCATTCCTTGTTGGGGACCCGGCCAGGGCCAATGAAATTGCTGACCATGCTTTGTTTCTCTCTGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593220.1
CDS CAA 72 bp ACTGCGCCAGGCTTGGGCCCTGTTTATAATATACATTaGGAGGGCAATGGGAAGCCCAGAACATTCAAGCAC +
Preference number: 6 (lower is better)
Translates to: TAPGLGPVYNIH*EGNGKPRTFKH
Trigger: GTGCTTGAATGTTCTGGGCTTCCCATTGCCCTCCAAATGTATATTATAAACAGGGCCCAAGCCTGGCGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683738.1
CDS TCA 72 bp AGCTTTGTCAGGTGCACCGATAAATGTTGTATCTGGTaGCTCCATAGCCTGAGATTTGGCTCTAGAGGCCCT +
Preference number: 6 (lower is better)
Translates to: SFVRCTDKCCIW*LHSLRFGSRGP
Trigger: AGGGCCTCTAGAGCCAAATCTCAGGCTATGGAGTCACCAGATACAACATTTATCGGTGCACCTGACAAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682285.1
ENST00000683738.1
CDS GCA 72 bp GGCGGGGTCTCCATCACCACTAGATTCTCTAATGTTTaGTACCACACTAAGCATGTACTTACCAGGATCTCC +
Preference number: 6 (lower is better)
Translates to: GGVSITTRFSNV*YHTKHVLTRIS
Trigger: GGAGATCCTGGTAAGTACATGCTTAGTGTGGTAGCAAACATTAGAGAATCTAGTGGTGATGGAGACCCCGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590806.5
CDS CAA 72 bp TCCCTTTTCTTTGTAGTGGGGTTGTGCATGTTTCTCTaGAGAAGCAAGGGAGAGGTGCCGGTCATCTATCCT +
Preference number: 6 (lower is better)
Translates to: SLFFVVGLCMFL*RSKGEVPVIYP
Trigger: AGGATAGATGACCGGCACCTCTCCCTTGCTTCTCAAGAGAAACATGCACAACCCCACTACAAAGAAAAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587485.1
ENST00000591118.1
CDS TCA 72 bp GATGCAATCACAGACATCCTGTCTGCTTCGTGTGTCTaGCGTTCATTCCTTTTCGTGGTCGAATCTGTCCAT +
Preference number: 6 (lower is better)
Translates to: DAITDILSASCV*RSFLFVVESVH
Trigger: ATGGACAGATTCGACCACGAAAAGGAATGAACGTCAGACACACGAAGCAGACAGGATGTCTGTGATTGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588976.1
CDS TCA 72 bp GCTGGTCATGAAATGACACATATCTTGCATGACTCCTaGCCCAAATTTAGAGGACATCCAAGGTCGACAGGG +
Preference number: 6 (lower is better)
Translates to: AGHEMTHILHDS*PKFRGHPRSTG
Trigger: CCCTGTCGACCTTGGATGTCCTCTAAATTTGGGTCAGGAGTCATGCAAGATATGTGTCATTTCATGACCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681972.1
CDS CAA 72 bp ATAGAAGAGGAAACAGGCTCAGATAGGTTAATTAAGTaGCTCATGGTCACAGCCAGTGAGTGGCAGGGTGAG +
Preference number: 6 (lower is better)
Translates to: IEEETGSDRLIK*LMVTASEWQGE
Trigger: CTCACCCTGCCACTCACTGGCTGTGACCATGAGCAACTTAATTAACCTATCTGAGCCTGTTTCCTCTTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591818.1
ENST00000593203.1
CDS CAA 90 bp TGGAAGCTTATAGAAGAGGAAACAGGCTCAGATAGGTTAATTAAGTaGCTCATGGTCACAGCCAGTGAGTGGCAGGGTGAGGATTTGAAC +
Preference number: 6 (lower is better)
Translates to: WKLIEEETGSDRLIK*LMVTASEWQGEDLN
Trigger: GTTCAAATCCTCACCCTGCCACTCACTGGCTGTGACCATGAGCAACTTAATTAACCTATCTGAGCCTGTTTCCTCTTCTATAAGCTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591818.1
ENST00000593203.1
CDS TCA 72 bp GAGGGCAAGATTTCTGCCATGTGGAAAAATATGCTCTaGTCCATGAGTGACATCTGCATAGGAGATAGAAGG +
Preference number: 6 (lower is better)
Translates to: EGKISAMWKNML*SMSDICIGDRR
Trigger: CCTTCTATCTCCTATGCAGATGTCACTCATGGATCAGAGCATATTTTTCCACATGGCAGAAATCTTGCCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590806.5
CDS CAA 72 bp AAGCCTCCTATAACAAAGGGTGGTGTGGCCTGGGCATaGGAGTCAATAAATTATGGTCAGAAAATCACAAGA +
Preference number: 6 (lower is better)
Translates to: KPPITKGGVAWA*ESINYGQKITR
Trigger: TCTTGTGATTTTCTGACCATAATTTATTGACTCCAATGCCCAGGCCACACCACCCTTTGTTATAGGAGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593203.1
CDS TCA 72 bp ACGGAAAAAGAAGTCCCAAATCCTAGCACCCAGGGCTaGCATTTTTGCAAACATCCTTGCAAATACAAAGAA +
Preference number: 6 (lower is better)
Translates to: TEKEVPNPSTQG*HFCKHPCKYKE
Trigger: TTCTTTGTATTTGCAAGGATGTTTGCAAAAATGTCAGCCCTGGGTGCTAGGATTTGGGACTTCTTTTTCCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000682524.1
CDS GCA 72 bp CCCTGCTCCATCCTTTCAATGACTATTTTTGAAGTGTaGAAGTGGAAGATGTCAACGATAAAACAACACAGG +
Preference number: 6 (lower is better)
Translates to: PCSILSMTIFEV*KWKMSTIKQHR
Trigger: CCTGTGTTGTTTTATCGTTGACATCTTCCACTTGCACACTTCAAAAATAGTCATTGAAAGGATGGAGCAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588976.1
CDS CAA 90 bp ACACTTGTAGACAGACATCCATGTTCAGTTTCATACATAAGGATGTaGTATATATCAGCTCAGTGCTATGTTGCACATGCTGGCTCCAAT +
Preference number: 6 (lower is better)
Translates to: TLVDRHPCSVSYIRM*YISAQCYVAHAGSN
Trigger: ATTGGAGCCAGCATGTGCAACATAGCACTGAGCTGATATATACAACATCCTTATGTATGAAACTGAACATGGATGTCTGTCTACAAGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682524.1
CDS GCA 72 bp GTTTCATACATAAGGATGTTGTATATATCAGCTCAGTaGTATGTTGCACATGCTGGCTCCAATGCCTATTTT +
Preference number: 6 (lower is better)
Translates to: VSYIRMLYISAQ*YVAHAGSNAYF
Trigger: AAAATAGGCATTGGAGCCAGCATGTGCAACATAGCACTGAGCTGATATATACAACATCCTTATGTATGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682524.1
CDS CCA 72 bp ACAGTCTGTTCGTCTAGTCACCATTGGATGGACATTTaGGGTCTTCCTAGCTTGAATTTATTACAAATAAAG +
Preference number: 6 (lower is better)
Translates to: TVCSSSHHWMDI*GLPSLNLLQIK
Trigger: CTTTATTTGTAATAAATTCAAGCTAGGAAGACCCCAAATGTCCATCCAATGGTGACTAGACGAACAGACTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588976.1
CDS CAA 72 bp GACAGACATCCATGTTCAGTTTCATACATAAGGATGTaGTATATATCAGCTCAGTGCTATGTTGCACATGCT +
Preference number: 6 (lower is better)
Translates to: DRHPCSVSYIRM*YISAQCYVAHA
Trigger: AGCATGTGCAACATAGCACTGAGCTGATATATACAACATCCTTATGTATGAAACTGAACATGGATGTCTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682524.1
CDS GCA 72 bp TTTCTTCTTTATCCATCCTACTTCCTGGCTAGTTCATaGCGGCATAGACAAATCCCACTATATTTTATATGT +
Preference number: 6 (lower is better)
Translates to: FLLYPSYFLASS*RHRQIPLYFIC
Trigger: ACATATAAAATATAGTGGGATTTGTCTATGCCGGCATGAACTAGCCAGGAAGTAGGATGGATAAAGAAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681972.1
CDS TCA 72 bp CTCCACCACCTTACGGTTCTAATATATTTTCTACTCTaGCAATCATATCACCACTTGCAAACAACATATATC +
Preference number: 6 (lower is better)
Translates to: LHHLTVLIYFLL*QSYHHLQTTYI
Trigger: GATATATGTTGTTTGCAAGTGGTGATATGATTGTCAGAGTAGAAAATATATTAGAACCGTAAGGTGGTGGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681972.1