RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DNASE1L2 (Homo sapiens)

Ensembl gene IDs: ENSG00000167968

Ensembl transcript IDs: ENST00000320700.10, ENST00000382437.8, ENST00000564065.5, ENST00000567494.5, ENST00000569184.1, ENST00000613572.4

Found 291 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp GCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGCTCAGAGCCAGGGTCTaGAGGTGGCATGCCCCAGCC +
Preference number: 2 (lower is better)
Translates to: AAHHVSMAPGPRPADSALLRARV*RWHAPA
Trigger: GGCTGGGGCATGCCACCTGCAGACCCTGGCTCTGAG...CAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
3UTR-3UTR GCA 90 bp AGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCCTCAGAGCCAGGGTCTaGAGGTGGCATGCCCCAGCC +
Preference number: 2 (lower is better)
Translates to: RAAHHVSMAPGPRPADSALRARV*RWHAPA
Trigger: GGCTGGGGCATGCCACCTGCAGACCCTGGCTCTGAG...GGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
3UTR-3UTR CCA 90 bp GGGGCCCGACCGGGAGCAGCTCATTTATTGAGCAGACATCTGCCGGGCAGTGCCCGTGTCCATGGCCCCTaGTCCACGCCCAGCCGACTC +
Preference number: 2 (lower is better)
Translates to: GARPGAAHLLSRHLPGSARVHGP*STPSRL
Trigger: GAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACG...GGCACTGCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTCCCGGTCGGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
3UTR-3UTR GCA 90 bp GGGGCCCGACCGGGAGCAGCTCATTTATTGAGCAGACATCTGCCGGGCAGTGCCCTCAGAGCCAGGGTCTaGAGGTGGCATGCCCCAGCC +
Preference number: 2 (lower is better)
Translates to: GARPGAAHLLSRHLPGSALRARV*RWHAPA
Trigger: GGCTGGGGCATGCCACCTGCAGACCCTGGCTCTGAG...GGCACTGCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTCCCGGTCGGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
3UTR-3UTR GCA 90 bp GTACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCCTCAGAGCCAGGGTCTaGAGGTGGCATGCCCCAGCC +
Preference number: 2 (lower is better)
Translates to: VQSSTSRVHGPWSTPSRLLRARV*RWHAPA
Trigger: GGCTGGGGCATGCCACCTGCAGACCCTGGCTCTGAG...GAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
3UTR-3UTR TCA 90 bp GGGGCCCGACCGGGAGCAGCTCATTTATTGAGCAGACATCTGCCGGGCAGTGCCGCTCACAACACCCCATaGGGTCGCTGGATGCAGCCC +
Preference number: 2 (lower is better)
Translates to: GARPGAAHLLSRHLPGSAAHNTP*GRWMQP
Trigger: GGGCTGCATCCAGCGACCTCATGGGGTGTTGTGAGC...GGCACTGCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTCCCGGTCGGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
3UTR-3UTR GCA 90 bp GGGGCCCGACCGGGAGCAGCTCATTTATTGAGCAGACATCTGCCGGGCAGTGCCACGCCCAGCCGACTCTaGCTTGGGGCCTCACTGAAG +
Preference number: 2 (lower is better)
Translates to: GARPGAAHLLSRHLPGSATPSRL*LGASLK
Trigger: CTTCAGTGAGGCCCCAAGGCAGAGTCGGCTGGGCGT...GGCACTGCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTCCCGGTCGGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
3UTR-3UTR GCA 90 bp TACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTTCACTGAAGGGTGGCTaGCACCCTGAAGGGGCCACT +
Preference number: 2 (lower is better)
Translates to: YRAAHHVSMAPGPRPADSSLKGG*HPEGAT
Trigger: AGTGGCCCCTTCAGGGTGGCAGCCACCCTTCAGTGA...AGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
3UTR GCA 72 bp CGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTaGCTTGGGGCCTCACTGAAGGGTGGCTGCCACCCT +
Preference number: 3 (lower is better)
Translates to: RVHGPWSTPSRL*LGASLKGGCHP
Trigger: AGGGTGGCAGCCACCCTTCAGTGAGGCCCCAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
3UTR CCA 72 bp GGGAACGGAGGTACAGAGCAGCACATCACGTGTCCATaGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGG +
Preference number: 3 (lower is better)
Translates to: GNGGTEQHITCP*PLVHAQPTLPW
Trigger: CCAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTACCTCCGTTCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
3UTR-3UTR CAA 90 bp CAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGGCTGAAGGGGCCACTGTaGGGCCATTCCTCAGAGCCA +
Preference number: 3 (lower is better)
Translates to: QHITCPWPLVHAQPTLPWLKGPL*GHSSEP
Trigger: TGGCTCTGAGGAATGGCCCAACAGTGGCCCCTTCAG...CCAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
3UTR-3UTR CAA 90 bp GCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGCTGAAGGGGCCACTGTaGGGCCATTCCTCAGAGCCA +
Preference number: 3 (lower is better)
Translates to: AAHHVSMAPGPRPADSALLKGPL*GHSSEP
Trigger: TGGCTCTGAGGAATGGCCCAACAGTGGCCCCTTCAG...CAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
3UTR-3UTR CAA 90 bp GGGGCCCGACCGGGAGCAGCTCATTTATTGAGCAGACATCTGCCGGGCAGTGCCCTGAAGGGGCCACTGTaGGGCCATTCCTCAGAGCCA +
Preference number: 3 (lower is better)
Translates to: GARPGAAHLLSRHLPGSALKGPL*GHSSEP
Trigger: TGGCTCTGAGGAATGGCCCAACAGTGGCCCCTTCAG...GGCACTGCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTCCCGGTCGGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp GCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGCGGGGGCCGAGAACTTaGCCACGAAGGGCTCGCGGC +
Preference number: 4 (lower is better)
Translates to: AAHHVSMAPGPRPADSALRGPRT*PRRARG
Trigger: GCCGCGAGCCCTTCGTGGTCAAGTTCTCGGCCCCCG...CAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp AGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCATCTCCGCCACGGCTTaGTGCGGCGCCGCGTGCAGC +
Preference number: 4 (lower is better)
Translates to: RAAHHVSMAPGPRPADSAISATA*CGAACS
Trigger: GCTGCACGCGGCGCCGCATCAAGCCGTGGCGGAGAT...GGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp TACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTTCCGCGGCCGCCCCTTaGCGGCCAGTGCGACGCGGA +
Preference number: 4 (lower is better)
Translates to: YRAAHHVSMAPGPRPADSSAAAP*RPVRRG
Trigger: TCCGCGTCGCACTGGCCGTCAAGGGGCGGCCGCGGA...AGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564065.5
CDS-3UTR TCA 90 bp GGGGCCCGACCGGGAGCAGCTCATTTATTGAGCAGACATCTGCCGGGCAGTGCCGCGCGGACACGGCGCTaGGGTCTGGGTCTCGCACCT +
Preference number: 4 (lower is better)
Translates to: GARPGAAHLLSRHLPGSAARTRR*GLGLAP
Trigger: AGGTGCGAGACCCAGACCTCAGCGCCGTGTCCGCGC...GGCACTGCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTCCCGGTCGGGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp AGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGCGCGGACACGGCGCTaGGGTCTGGGTCTCGCACCT +
Preference number: 4 (lower is better)
Translates to: SSTSRVHGPWSTPSRLCLARTRR*GLGLAP
Trigger: AGGTGCGAGACCCAGACCTCAGCGCCGTGTCCGCGC...AAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp CAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGGCGAAGGGCTCGCGGCTaGAGACGTCCTCGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: QHITCPWPLVHAQPTLPWRRARG*RRPRGL
Trigger: CAGACCCCGAGGACGTCTTCAGCCGCGAGCCCTTCG...CCAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp GGGGCCCGACCGGGAGCAGCTCATTTATTGAGCAGACATCTGCCGGGCAGTGCCCGGGGGCCGAGAACTTaGCCACGAAGGGCTCGCGGC +
Preference number: 4 (lower is better)
Translates to: GARPGAAHLLSRHLPGSARGPRT*PRRARG
Trigger: GCCGCGAGCCCTTCGTGGTCAAGTTCTCGGCCCCCG...GGCACTGCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTCCCGGTCGGGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp GTACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCATCTCCGCCACGGCTTaGTGCGGCGCCGCGTGCAGC +
Preference number: 4 (lower is better)
Translates to: VQSSTSRVHGPWSTPSRLISATA*CGAACS
Trigger: GCTGCACGCGGCGCCGCATCAAGCCGTGGCGGAGAT...GAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp GGGGCCCGACCGGGAGCAGCTCATTTATTGAGCAGACATCTGCCGGGCAGTGCCATCTCCGCCACGGCTTaGTGCGGCGCCGCGTGCAGC +
Preference number: 4 (lower is better)
Translates to: GARPGAAHLLSRHLPGSAISATA*CGAACS
Trigger: GCTGCACGCGGCGCCGCATCAAGCCGTGGCGGAGAT...GGCACTGCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTCCCGGTCGGGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp AGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCATCCCGGGTCCAGGCTaGGGGCGTGTCCGACACAGG +
Preference number: 4 (lower is better)
Translates to: RAAHHVSMAPGPRPADSAIPGPG*GRVRHR
Trigger: CCTGTGTCGGACACGCCCGCAGCCTGGACCCGGGAT...GGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320700.10
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp GCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGGGGAGGGACAGACGCTaGCGCCTACGCAGACCCGCT +
Preference number: 4 (lower is better)
Translates to: AAHHVSMAPGPRPADSALGRDRR*RLRRPA
Trigger: AGCGGGTCTGCGTAGGCGGCAGCGTCTGTCCCTCCC...CAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382437.8
ENST00000564065.5
CDS-3UTR GCA 90 bp AGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTCCACCTGCTCACCCTaGGGTGGAGGCCGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: RAAHHVSMAPGPRPADSASTCSP*GGGRGS
Trigger: GGAGCCTCGGCCTCCACCGCAGGGTGAGCAGGTGGA...GGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564065.5
CDS-3UTR GCA 90 bp GCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGCGTCCCAGAAGCCCCTaGCAGCCCCCTAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: AAHHVSMAPGPRPADSALRPRSP*QPPRRE
Trigger: CTCCCTCCTAGGGGGCTGGCAGGGGCTTCTGGGACG...CAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000564065.5
CDS-3UTR GCA 90 bp CAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGGAGGCTCCCAGGGCACTaGTGGGCTCTCAGGGACCGC +
Preference number: 4 (lower is better)
Translates to: QHITCPWPLVHAQPTLPWRLPGH*WALRDR
Trigger: GCGGTCCCTGAGAGCCCAGCAGTGCCCTGGGAGCCT...CCAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564065.5
CDS-3UTR GCA 90 bp GCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGCGCGGAATCCGCCCCTaGGTTCTGCAGGCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: AAHHVSMAPGPRPADSALRGIRP*VLQAPR
Trigger: CCTGGGAGCCTGCAGAACGCAGGGGCGGATTCCGCG...CAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564065.5
CDS-3UTR CCA 90 bp GGGGCCCGACCGGGAGCAGCTCATTTATTGAGCAGACATCTGCCGGGCAGTGCCCGCGGAGCGAGAGGCTaGGAGGGACAGACGCTGCCG +
Preference number: 4 (lower is better)
Translates to: GARPGAAHLLSRHLPGSARGARG*EGQTLP
Trigger: CGGCAGCGTCTGTCCCTCCCAGCCTCTCGCTCCGCG...GGCACTGCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTCCCGGTCGGGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000613572.4
CDS-3UTR CCA 90 bp AGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTCGCGGAGCGAGAGGCTaGGAGGGACAGACGCTGCCG +
Preference number: 4 (lower is better)
Translates to: SSTSRVHGPWSTPSRLCLRGARG*EGQTLP
Trigger: CGGCAGCGTCTGTCCCTCCCAGCCTCTCGCTCCGCG...AAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000613572.4
CDS-3UTR CCA 90 bp GGGGCCCGACCGGGAGCAGCTCATTTATTGAGCAGACATCTGCCGGGCAGTGCCTGCTGCGGGAAGGGGTaGGGGCGTCAGAGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: GARPGAAHLLSRHLPGSACCGKG*GRQSSA
Trigger: CGCCGAGCTCTGACGCCCCCACCCCTTCCCGCAGCA...GGCACTGCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTCCCGGTCGGGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320700.10
ENST00000564065.5
ENST00000567494.5
CDS-3UTR CCA 90 bp GTACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCTGCGGGAAGGGGTaGGGGCGTCAGAGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: VQSSTSRVHGPWSTPSRLCCGKG*GRQSSA
Trigger: CGCCGAGCTCTGACGCCCCCACCCCTTCCCGCAGCA...GAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320700.10
ENST00000564065.5
ENST00000567494.5
CDS-3UTR CCA 90 bp AGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTTGCTGCGGGAAGGGGTaGGGGCGTCAGAGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: SSTSRVHGPWSTPSRLCLCCGKG*GRQSSA
Trigger: CGCCGAGCTCTGACGCCCCCACCCCTTCCCGCAGCA...AAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320700.10
ENST00000564065.5
ENST00000567494.5
CDS-3UTR CCA 90 bp CAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGGTGCTCCTCAGACGGATaGCGGCCCAGTCCTGCGCCC +
Preference number: 4 (lower is better)
Translates to: QHITCPWPLVHAQPTLPWCSSDG*RPSPAP
Trigger: GGGCGCAGGACTGGGCCGCCATCCGTCTGAGGAGCA...CCAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp GGGGCCCGACCGGGAGCAGCTCATTTATTGAGCAGACATCTGCCGGGCAGTGCCTGCACGGTGGCCGACTaGGGCTTCAGGCTCCGGCGC +
Preference number: 4 (lower is better)
Translates to: GARPGAAHLLSRHLPGSACTVAD*GFRLRR
Trigger: GCGCCGGAGCCTGAAGCCCCAGTCGGCCACCGTGCA...GGCACTGCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTCCCGGTCGGGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp GTACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCACGGTGGCCGACTaGGGCTTCAGGCTCCGGCGC +
Preference number: 4 (lower is better)
Translates to: VQSSTSRVHGPWSTPSRLCTVAD*GFRLRR
Trigger: GCGCCGGAGCCTGAAGCCCCAGTCGGCCACCGTGCA...GAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp AGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCCGTGTCCATGGCCCCTaGTCCACGCCCAGCCGACTC +
Preference number: 4 (lower is better)
Translates to: RAAHHVSMAPGPRPADSARVHGP*STPSRL
Trigger: GAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACG...GGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp GCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGCGTGTCCATGGCCCCTaGTCCACGCCCAGCCGACTC +
Preference number: 4 (lower is better)
Translates to: AAHHVSMAPGPRPADSALRVHGP*STPSRL
Trigger: GAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACG...CAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp AGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTCGAAGGGCTCGCGGCTaGAGACGTCCTCGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: SSTSRVHGPWSTPSRLCLRRARG*RRPRGL
Trigger: CAGACCCCGAGGACGTCTTCAGCCGCGAGCCCTTCG...AAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp GGGGCCCGACCGGGAGCAGCTCATTTATTGAGCAGACATCTGCCGGGCAGTGCCCGAAGGGCTCGCGGCTaGAGACGTCCTCGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: GARPGAAHLLSRHLPGSARRARG*RRPRGL
Trigger: CAGACCCCGAGGACGTCTTCAGCCGCGAGCCCTTCG...GGCACTGCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTCCCGGTCGGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp GGGGCCCGACCGGGAGCAGCTCATTTATTGAGCAGACATCTGCCGGGCAGTGCCGCAGGGGCCGGTATTTaGGGTCCTGGGCCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: GARPGAAHLLSRHLPGSAAGAGI*GPGPGR
Trigger: CCTCCCTGGCCCAGGACCTCAAATACCGGCCCCTGC...GGCACTGCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTCCCGGTCGGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564065.5
CDS-3UTR GCA 90 bp CAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGGCACCAGGTTCTGTGCTaGTGCGGGAAGGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: QHITCPWPLVHAQPTLPWHQVLC*CGKGWG
Trigger: CCCCCACCCCTTCCCGCAGCAGCACAGAACCTGGTG...CCAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320700.10
ENST00000564065.5
ENST00000567494.5
CDS-3UTR GCA 90 bp CAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGGAGGCGCAGTCTGAGTTaGCCACCGTGGTGTCGGCGC +
Preference number: 4 (lower is better)
Translates to: QHITCPWPLVHAQPTLPWRRSLS*PPWCRR
Trigger: GCGCCGACACCACGGTGGGCAACTCAGACTGCGCCT...CCAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp GCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGTCCTCCTGGAAGTCGTaGACGGTGGCCGACTGGGGC +
Preference number: 4 (lower is better)
Translates to: AAHHVSMAPGPRPADSALSSWKS*TVADWG
Trigger: GCCCCAGTCGGCCACCGTGCACGACTTCCAGGAGGA...CAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp AGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCGGTCTGCAGGTGGCATaGCCCAGCCAGGCCTCGAGT +
Preference number: 4 (lower is better)
Translates to: RAAHHVSMAPGPRPADSAGLQVA*PSQASS
Trigger: ACTCGAGGCCTGGCTGGGGCATGCCACCTGCAGACC...GGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp CAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGGGGTCTGCAGGTGGCATaGCCCAGCCAGGCCTCGAGT +
Preference number: 4 (lower is better)
Translates to: QHITCPWPLVHAQPTLPWGLQVA*PSQASS
Trigger: ACTCGAGGCCTGGCTGGGGCATGCCACCTGCAGACC...CCAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp GCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGACATCTGCCGGGCAGTaGCCCCTGCACCCCTCATGG +
Preference number: 4 (lower is better)
Translates to: AAHHVSMAPGPRPADSALTSAGQ*PLHPSW
Trigger: CCATGAGGGGTGCAGGGGGCACTGCCCGGCAGATGT...CAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp CAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGGACATCTGCCGGGCAGTaGCCCCTGCACCCCTCATGG +
Preference number: 4 (lower is better)
Translates to: QHITCPWPLVHAQPTLPWTSAGQ*PLHPSW
Trigger: CCATGAGGGGTGCAGGGGGCACTGCCCGGCAGATGT...CCAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp AGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTCCCCTTGACGGCCAGTaGGACGCGGAATCCGCCCCT +
Preference number: 4 (lower is better)
Translates to: SSTSRVHGPWSTPSRLCLPLDGQ*DAESAP
Trigger: AGGGGCGGATTCCGCGTCGCACTGGCCGTCAAGGGG...AAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000564065.5
CDS-3UTR CCA 90 bp GCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGCTGCCGCCTTGGATGTaGGTGCAGAGGCCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: AAHHVSMAPGPRPADSALLPPWM*VQRPEA
Trigger: AGCCTCGGGCCTCTGCACCCACATCCAAGGCGGCAG...CAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320700.10
ENST00000613572.4
CDS-3UTR CCA 90 bp AGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCCAGACGCTGCCGCCTTaGATGTGGGTGCAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: RAAHHVSMAPGPRPADSAQTLPP*MWVQRP
Trigger: GGGCCTCTGCACCCACATCCAAGGCGGCAGCGTCTG...GGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320700.10
ENST00000613572.4
CDS-3UTR CCA 90 bp TACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTCGCGGAGCGAGAGGCTaGGAGGGACAGACGCTGCCG +
Preference number: 4 (lower is better)
Translates to: YRAAHHVSMAPGPRPADSRGARG*EGQTLP
Trigger: CGGCAGCGTCTGTCCCTCCCAGCCTCTCGCTCCGCG...AGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000613572.4
CDS-3UTR CCA 90 bp CAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGGCACGGCGCTGAGGTCTaGGTCTCGCACCTCCTGCAC +
Preference number: 4 (lower is better)
Translates to: QHITCPWPLVHAQPTLPWHGAEV*VSHLLH
Trigger: GTGCAGGAGGTGCGAGACCCAGACCTCAGCGCCGTG...CCAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp AGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTTGCTCCTCAGACGGATaGCGGCCCAGTCCTGCGCCC +
Preference number: 4 (lower is better)
Translates to: SSTSRVHGPWSTPSRLCLCSSDG*RPSPAP
Trigger: GGGCGCAGGACTGGGCCGCCATCCGTCTGAGGAGCA...AAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp GGGGCCCGACCGGGAGCAGCTCATTTATTGAGCAGACATCTGCCGGGCAGTGCCTGCTCCTCAGACGGATaGCGGCCCAGTCCTGCGCCC +
Preference number: 4 (lower is better)
Translates to: GARPGAAHLLSRHLPGSACSSDG*RPSPAP
Trigger: GGGCGCAGGACTGGGCCGCCATCCGTCTGAGGAGCA...GGCACTGCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTCCCGGTCGGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp GTACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCTCCTCAGACGGATaGCGGCCCAGTCCTGCGCCC +
Preference number: 4 (lower is better)
Translates to: VQSSTSRVHGPWSTPSRLCSSDG*RPSPAP
Trigger: GGGCGCAGGACTGGGCCGCCATCCGTCTGAGGAGCA...GAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp TACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTTGCACGGTGGCCGACTaGGGCTTCAGGCTCCGGCGC +
Preference number: 4 (lower is better)
Translates to: YRAAHHVSMAPGPRPADSCTVAD*GFRLRR
Trigger: GCGCCGGAGCCTGAAGCCCCAGTCGGCCACCGTGCA...AGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp GCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGGGAAGTCGTGCACGGTaGCCGACTGGGGCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: AAHHVSMAPGPRPADSALGSRAR*PTGASG
Trigger: GCCTGAAGCCCCAGTCGGCCACCGTGCACGACTTCC...CAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp AGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCGGAAGTCGTGCACGGTaGCCGACTGGGGCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: RAAHHVSMAPGPRPADSAGSRAR*PTGASG
Trigger: GCCTGAAGCCCCAGTCGGCCACCGTGCACGACTTCC...GGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp AGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTCGTGTCCATGGCCCCTaGTCCACGCCCAGCCGACTC +
Preference number: 4 (lower is better)
Translates to: SSTSRVHGPWSTPSRLCLRVHGP*STPSRL
Trigger: GAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACG...AAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp CAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGGCCAGGATCTTCGCGATaGTGCTGCCGCAAGCGGGGT +
Preference number: 4 (lower is better)
Translates to: QHITCPWPLVHAQPTLPWPGSSR*CCRKRG
Trigger: ACCCCGCTTGCGGCAGCATCATCGCGAAGATCCTGG...CCAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp GCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGCCAGGATCTTCGCGATaGTGCTGCCGCAAGCGGGGT +
Preference number: 4 (lower is better)
Translates to: AAHHVSMAPGPRPADSALPGSSR*CCRKRG
Trigger: ACCCCGCTTGCGGCAGCATCATCGCGAAGATCCTGG...CAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp TCACTGAAGGGTGGCTGCCACCCTGAAGGGGCCACTGTTGGGCCATTCCTCAGAGCGCGGACACGGCGCTaGGGTCTGGGTCTCGCACCT +
Preference number: 4 (lower is better)
Translates to: SLKGGCHPEGATVGPFLRARTRR*GLGLAP
Trigger: AGGTGCGAGACCCAGACCTCAGCGCCGTGTCCGCGC...TCTGAGGAATGGCCCAACAGTGGCCCCTTCAGGGTGGCAGCCACCCTTCAGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp TACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTCGAAGGGCTCGCGGCTaGAGACGTCCTCGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: YRAAHHVSMAPGPRPADSRRARG*RRPRGL
Trigger: CAGACCCCGAGGACGTCTTCAGCCGCGAGCCCTTCG...AGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp TCACTGAAGGGTGGCTGCCACCCTGAAGGGGCCACTGTTGGGCCATTCCTCAGACGGGGGCCGAGAACTTaGCCACGAAGGGCTCGCGGC +
Preference number: 4 (lower is better)
Translates to: SLKGGCHPEGATVGPFLRRGPRT*PRRARG
Trigger: GCCGCGAGCCCTTCGTGGTCAAGTTCTCGGCCCCCG...TCTGAGGAATGGCCCAACAGTGGCCCCTTCAGGGTGGCAGCCACCCTTCAGTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp CAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGGGTCGTAGGCGCAGTCTaGGTTGCCCACCGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: QHITCPWPLVHAQPTLPWVVGAV*VAHRGV
Trigger: GACACCACGGTGGGCAACTCAGACTGCGCCTACGAC...CCAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp GCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGGTCGTAGGCGCAGTCTaGGTTGCCCACCGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: AAHHVSMAPGPRPADSALVVGAV*VAHRGV
Trigger: GACACCACGGTGGGCAACTCAGACTGCGCCTACGAC...CAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp AGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCGTCGTAGGCGCAGTCTaGGTTGCCCACCGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: RAAHHVSMAPGPRPADSAVVGAV*VAHRGV
Trigger: GACACCACGGTGGGCAACTCAGACTGCGCCTACGAC...GGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp GCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGGCTCACAACACCCCATaGGGTCGCTGGATGCAGCCC +
Preference number: 4 (lower is better)
Translates to: AAHHVSMAPGPRPADSALAHNTP*GRWMQP
Trigger: GGGCTGCATCCAGCGACCTCATGGGGTGTTGTGAGC...CAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp TACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGGTGGGAGACCTGCCTaGGCCGGTTCTGGTGCCCCA +
Preference number: 4 (lower is better)
Translates to: YRAAHHVSMAPGPRPADSGGRPA*AGSGAP
Trigger: TGGGGCACCAGAACCGGCTCAGGCAGGTCTCCCACC...AGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564065.5
CDS-3UTR GCA 90 bp CAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGGCGCCTTGGATGTGGGTaGAGAGGCCCGAGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: QHITCPWPLVHAQPTLPWRLGCG*RGPRLR
Trigger: TCTGAGCCTCGGGCCTCTGCACCCACATCCAAGGCG...CCAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320700.10
ENST00000613572.4
CDS-3UTR GCA 90 bp AGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTCACCAGGTTCTGTGCTaGTGCGGGAAGGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: SSTSRVHGPWSTPSRLCLHQVLC*CGKGWG
Trigger: CCCCCACCCCTTCCCGCAGCAGCACAGAACCTGGTG...AAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320700.10
ENST00000564065.5
ENST00000567494.5
CDS-3UTR GCA 90 bp CAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGGCAGCACCAGGTTCTGTaGTGCTGCGGGAAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: QHITCPWPLVHAQPTLPWQHQVL*CCGKGW
Trigger: CCACCCCTTCCCGCAGCAGCACAGAACCTGGTGCTG...CCAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320700.10
ENST00000564065.5
ENST00000567494.5
CDS-3UTR GCA 90 bp GCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGCAGCACCAGGTTCTGTaGTGCTGCGGGAAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: AAHHVSMAPGPRPADSALQHQVL*CCGKGW
Trigger: CCACCCCTTCCCGCAGCAGCACAGAACCTGGTGCTG...CAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320700.10
ENST00000564065.5
ENST00000567494.5
CDS-3UTR GCA 90 bp GGGGCCCGACCGGGAGCAGCTCATTTATTGAGCAGACATCTGCCGGGCAGTGCCAGGCGCAGTCTGAGTTaGCCACCGTGGTGTCGGCGC +
Preference number: 4 (lower is better)
Translates to: GARPGAAHLLSRHLPGSARRSLS*PPWCRR
Trigger: GCGCCGACACCACGGTGGGCAACTCAGACTGCGCCT...GGCACTGCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTCCCGGTCGGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp AGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTAGGCGCAGTCTGAGTTaGCCACCGTGGTGTCGGCGC +
Preference number: 4 (lower is better)
Translates to: SSTSRVHGPWSTPSRLCLRRSLS*PPWCRR
Trigger: GCGCCGACACCACGGTGGGCAACTCAGACTGCGCCT...AAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp CAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGGCGCCACAGGCCACAATaGGGTCGTAGGCGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: QHITCPWPLVHAQPTLPWRHRPQ*GRRRSL
Trigger: CAGACTGCGCCTACGACCGCATTGTGGCCTGTGGCG...CCAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp GGGGCCCGACCGGGAGCAGCTCATTTATTGAGCAGACATCTGCCGGGCAGTGCCTCCTCCTGGAAGTCGTaGACGGTGGCCGACTGGGGC +
Preference number: 4 (lower is better)
Translates to: GARPGAAHLLSRHLPGSASSWKS*TVADWG
Trigger: GCCCCAGTCGGCCACCGTGCACGACTTCCAGGAGGA...GGCACTGCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTCCCGGTCGGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp GTACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTCCTCCTGGAAGTCGTaGACGGTGGCCGACTGGGGC +
Preference number: 4 (lower is better)
Translates to: VQSSTSRVHGPWSTPSRLSSWKS*TVADWG
Trigger: GCCCCAGTCGGCCACCGTGCACGACTTCCAGGAGGA...GAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp AGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGGTCTGCAGGTGGCATaGCCCAGCCAGGCCTCGAGT +
Preference number: 4 (lower is better)
Translates to: SSTSRVHGPWSTPSRLCLGLQVA*PSQASS
Trigger: ACTCGAGGCCTGGCTGGGGCATGCCACCTGCAGACC...AAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp AGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTCTCAGAGCCAGGGTCTaGAGGTGGCATGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: SSTSRVHGPWSTPSRLCLLRARV*RWHAPA
Trigger: GGCTGGGGCATGCCACCTGCAGACCCTGGCTCTGAG...AAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp AGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCACGCCCAGCCGACTCTaGCTTGGGGCCTCACTGAAG +
Preference number: 4 (lower is better)
Translates to: RAAHHVSMAPGPRPADSATPSRL*LGASLK
Trigger: CTTCAGTGAGGCCCCAAGGCAGAGTCGGCTGGGCGT...GGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp GGGGCCCGACCGGGAGCAGCTCATTTATTGAGCAGACATCTGCCGGGCAGTGCCACATCTGCCGGGCAGTaGCCCCTGCACCCCTCATGG +
Preference number: 4 (lower is better)
Translates to: GARPGAAHLLSRHLPGSATSAGQ*PLHPSW
Trigger: CCATGAGGGGTGCAGGGGGCACTGCCCGGCAGATGT...GGCACTGCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTCCCGGTCGGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp TACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGGGAGGGACAGACGCTaGCGCCTACGCAGACCCGCT +
Preference number: 4 (lower is better)
Translates to: YRAAHHVSMAPGPRPADSGRDRR*RLRRPA
Trigger: AGCGGGTCTGCGTAGGCGGCAGCGTCTGTCCCTCCC...AGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382437.8
ENST00000564065.5
CDS-3UTR GCA 90 bp GGGGCCCGACCGGGAGCAGCTCATTTATTGAGCAGACATCTGCCGGGCAGTGCCTGCTGCTGCTCCACCTaGTCACCCTGCGGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: GARPGAAHLLSRHLPGSACCCST*SPCGGG
Trigger: GCCTCCACCGCAGGGTGAGCAGGTGGAGCAGCAGCA...GGCACTGCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTCCCGGTCGGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564065.5
CDS-3UTR GCA 90 bp GCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGAAGGGGTGGGAGACCTaGCTGAGCCGGTTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: AAHHVSMAPGPRPADSALKGWET*LSRFWC
Trigger: GCACCAGAACCGGCTCAGGCAGGTCTCCCACCCCTT...CAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564065.5
CDS-3UTR GCA 90 bp AGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTCACTGCGCGGGAAGCTaGAGCCGGAATGGAGGGTCC +
Preference number: 4 (lower is better)
Translates to: SSTSRVHGPWSTPSRLCLHCAGS*SRNGGS
Trigger: GGACCCTCCATTCCGGCTGCAGCTTCCCGCGCAGTG...AAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564065.5
CDS-3UTR CCA 90 bp CAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGGGAGATCCTAGGGGGATaGGGATCCCGGGTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: QHITCPWPLVHAQPTLPWEILGG*GSRVQA
Trigger: AGCCTGGACCCGGGATCCCCATCCCCCTAGGATCTC...CCAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320700.10
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp GGGGCCCGACCGGGAGCAGCTCATTTATTGAGCAGACATCTGCCGGGCAGTGCCCAGACGCTGCCGCCTTaGATGTGGGTGCAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: GARPGAAHLLSRHLPGSAQTLPP*MWVQRP
Trigger: GGGCCTCTGCACCCACATCCAAGGCGGCAGCGTCTG...GGCACTGCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTCCCGGTCGGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320700.10
ENST00000613572.4
CDS-3UTR CCA 90 bp AGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTCACGGCGCTGAGGTCTaGGTCTCGCACCTCCTGCAC +
Preference number: 4 (lower is better)
Translates to: SSTSRVHGPWSTPSRLCLHGAEV*VSHLLH
Trigger: GTGCAGGAGGTGCGAGACCCAGACCTCAGCGCCGTG...AAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp GCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGTCCCGGCCCAGGGGCTaGCTGCTCACAAAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: AAHHVSMAPGPRPADSALSRPRG*LLTKLY
Trigger: GTACAGCTTTGTGAGCAGCCAGCCCCTGGGCCGGGA...CAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp AGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTCCCGGCCCAGGGGCTaGCTGCTCACAAAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: RAAHHVSMAPGPRPADSASRPRG*LLTKLY
Trigger: GTACAGCTTTGTGAGCAGCCAGCCCCTGGGCCGGGA...GGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp TCACTGAAGGGTGGCTGCCACCCTGAAGGGGCCACTGTTGGGCCATTCCTCAGATGCACGGTGGCCGACTaGGGCTTCAGGCTCCGGCGC +
Preference number: 4 (lower is better)
Translates to: SLKGGCHPEGATVGPFLRCTVAD*GFRLRR
Trigger: GCGCCGGAGCCTGAAGCCCCAGTCGGCCACCGTGCA...TCTGAGGAATGGCCCAACAGTGGCCCCTTCAGGGTGGCAGCCACCCTTCAGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp GGGGCCCGACCGGGAGCAGCTCATTTATTGAGCAGACATCTGCCGGGCAGTGCCGGAAGTCGTGCACGGTaGCCGACTGGGGCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: GARPGAAHLLSRHLPGSAGSRAR*PTGASG
Trigger: GCCTGAAGCCCCAGTCGGCCACCGTGCACGACTTCC...GGCACTGCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTCCCGGTCGGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp AGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGGAAGTCGTGCACGGTaGCCGACTGGGGCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: SSTSRVHGPWSTPSRLCLGSRAR*PTGASG
Trigger: GCCTGAAGCCCCAGTCGGCCACCGTGCACGACTTCC...AAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp CAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGGCAGCCGACTCTGCCTTaGGGCCTCACTGAAGGGTGG +
Preference number: 4 (lower is better)
Translates to: QHITCPWPLVHAQPTLPWQPTLP*GLTEGW
Trigger: CCACCCTTCAGTGAGGCCCCAAGGCAGAGTCGGCTG...CCAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp GCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGCAGCCGACTCTGCCTTaGGGCCTCACTGAAGGGTGG +
Preference number: 4 (lower is better)
Translates to: AAHHVSMAPGPRPADSALQPTLP*GLTEGW
Trigger: CCACCCTTCAGTGAGGCCCCAAGGCAGAGTCGGCTG...CAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp TACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTCGTGTCCATGGCCCCTaGTCCACGCCCAGCCGACTC +
Preference number: 4 (lower is better)
Translates to: YRAAHHVSMAPGPRPADSRVHGP*STPSRL
Trigger: GAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACG...AGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp GGGGCCCGACCGGGAGCAGCTCATTTATTGAGCAGACATCTGCCGGGCAGTGCCCTGCTCACCCTGCGGTaGAGGCCGAGGCTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: GARPGAAHLLSRHLPGSALLTLR*RPRLPD
Trigger: ATCTGGGAGCCTCGGCCTCCACCGCAGGGTGAGCAG...GGCACTGCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTCCCGGTCGGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564065.5
CDS-3UTR CCA 90 bp AGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTGCCTGAGCCGGTTCTaGTGCCCCAGACCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: RAAHHVSMAPGPRPADSACLSRF*CPRPVP
Trigger: TGGGACAGGTCTGGGGCACCAGAACCGGCTCAGGCA...GGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564065.5
CDS-3UTR CCA 90 bp AGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGCGGAGCGAGAGGCTTaGATGTGGGTGCAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: SSTSRVHGPWSTPSRLCLAEREA*MWVQRP
Trigger: GGGCCTCTGCACCCACATCCAAGCCTCTCGCTCCGC...AAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567494.5
CDS-3UTR TCA 90 bp AGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTCCAGGATCTTCGCGATaGTGCTGCCGCAAGCGGGGT +
Preference number: 4 (lower is better)
Translates to: SSTSRVHGPWSTPSRLCLPGSSR*CCRKRG
Trigger: ACCCCGCTTGCGGCAGCATCATCGCGAAGATCCTGG...AAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp GGGGCCCGACCGGGAGCAGCTCATTTATTGAGCAGACATCTGCCGGGCAGTGCCCCAGGATCTTCGCGATaGTGCTGCCGCAAGCGGGGT +
Preference number: 4 (lower is better)
Translates to: GARPGAAHLLSRHLPGSAPGSSR*CCRKRG
Trigger: ACCCCGCTTGCGGCAGCATCATCGCGAAGATCCTGG...GGCACTGCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTCCCGGTCGGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp AGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCAGCTGCAGTCGGCGTTaGAGTCGCCCAGGAACAGCA +
Preference number: 4 (lower is better)
Translates to: RAAHHVSMAPGPRPADSASCSRR*SRPGTA
Trigger: TGCTGTTCCTGGGCGACTTCAACGCCGACTGCAGCT...GGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp GGGGCCCGACCGGGAGCAGCTCATTTATTGAGCAGACATCTGCCGGGCAGTGCCGTCGTAGGCGCAGTCTaGGTTGCCCACCGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: GARPGAAHLLSRHLPGSAVVGAV*VAHRGV
Trigger: GACACCACGGTGGGCAACTCAGACTGCGCCTACGAC...GGCACTGCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTCCCGGTCGGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp AGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTCGCCTTGGATGTGGGTaGAGAGGCCCGAGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: SSTSRVHGPWSTPSRLCLRLGCG*RGPRLR
Trigger: TCTGAGCCTCGGGCCTCTGCACCCACATCCAAGGCG...AAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320700.10
ENST00000613572.4
CDS-3UTR GCA 90 bp AGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCGGCCCAGGGGCTGGCTaGTCACAAAGCTGTACTCGT +
Preference number: 4 (lower is better)
Translates to: RAAHHVSMAPGPRPADSAGPGAG*SQSCTR
Trigger: ACGAGTACAGCTTTGTGAGCAGCCAGCCCCTGGGCC...GGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp CAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGGGGCCCAGGGGCTGGCTaGTCACAAAGCTGTACTCGT +
Preference number: 4 (lower is better)
Translates to: QHITCPWPLVHAQPTLPWGPGAG*SQSCTR
Trigger: ACGAGTACAGCTTTGTGAGCAGCCAGCCCCTGGGCC...CCAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp AGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTCAGCACCAGGTTCTGTaGTGCTGCGGGAAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: SSTSRVHGPWSTPSRLCLQHQVL*CCGKGW
Trigger: CCACCCCTTCCCGCAGCAGCACAGAACCTGGTGCTG...AAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320700.10
ENST00000564065.5
ENST00000567494.5
CDS-3UTR GCA 90 bp TACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTAGGCGCAGTCTGAGTTaGCCACCGTGGTGTCGGCGC +
Preference number: 4 (lower is better)
Translates to: YRAAHHVSMAPGPRPADSRRSLS*PPWCRR
Trigger: GCGCCGACACCACGGTGGGCAACTCAGACTGCGCCT...AGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp GGGGCCCGACCGGGAGCAGCTCATTTATTGAGCAGACATCTGCCGGGCAGTGCCCGCCACAGGCCACAATaGGGTCGTAGGCGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: GARPGAAHLLSRHLPGSARHRPQ*GRRRSL
Trigger: CAGACTGCGCCTACGACCGCATTGTGGCCTGTGGCG...GGCACTGCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTCCCGGTCGGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp GCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGTCACTGAAGGGTGGCTaGCACCCTGAAGGGGCCACT +
Preference number: 4 (lower is better)
Translates to: AAHHVSMAPGPRPADSALSLKGG*HPEGAT
Trigger: AGTGGCCCCTTCAGGGTGGCAGCCACCCTTCAGTGA...CAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp AGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTCACTGAAGGGTGGCTaGCACCCTGAAGGGGCCACT +
Preference number: 4 (lower is better)
Translates to: RAAHHVSMAPGPRPADSASLKGG*HPEGAT
Trigger: AGTGGCCCCTTCAGGGTGGCAGCCACCCTTCAGTGA...GGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp CAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGGTCACTGAAGGGTGGCTaGCACCCTGAAGGGGCCACT +
Preference number: 4 (lower is better)
Translates to: QHITCPWPLVHAQPTLPWSLKGG*HPEGAT
Trigger: AGTGGCCCCTTCAGGGTGGCAGCCACCCTTCAGTGA...CCAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp AGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTACGCCCAGCCGACTCTaGCTTGGGGCCTCACTGAAG +
Preference number: 4 (lower is better)
Translates to: SSTSRVHGPWSTPSRLCLTPSRL*LGASLK
Trigger: CTTCAGTGAGGCCCCAAGGCAGAGTCGGCTGGGCGT...AAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp GTACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCACGCCCAGCCGACTCTaGCTTGGGGCCTCACTGAAG +
Preference number: 4 (lower is better)
Translates to: VQSSTSRVHGPWSTPSRLTPSRL*LGASLK
Trigger: CTTCAGTGAGGCCCCAAGGCAGAGTCGGCTGGGCGT...GAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp AGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTCCCAGCATCTCCTGCTaGTGCTCCACCTGCTCACCC +
Preference number: 4 (lower is better)
Translates to: SSTSRVHGPWSTPSRLCLPSISC*CSTCSP
Trigger: GGGTGAGCAGGTGGAGCAGCAGCAGGAGATGCTGGG...AAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564065.5
CDS-3UTR GCA 90 bp AGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGCTCTCAGGGACCGCTaGCTTCTCACTGCGCGGGAA +
Preference number: 4 (lower is better)
Translates to: SSTSRVHGPWSTPSRLCLALRDR*LLTARE
Trigger: TTCCCGCGCAGTGAGAAGGCAGCGGTCCCTGAGAGC...AAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564065.5
CDS-3UTR CCA 90 bp GGGGCCCGACCGGGAGCAGCTCATTTATTGAGCAGACATCTGCCGGGCAGTGCCGAGATCCTAGGGGGATaGGGATCCCGGGTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: GARPGAAHLLSRHLPGSAEILGG*GSRVQA
Trigger: AGCCTGGACCCGGGATCCCCATCCCCCTAGGATCTC...GGCACTGCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTCCCGGTCGGGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320700.10
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp AGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGAGATCCTAGGGGGATaGGGATCCCGGGTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: SSTSRVHGPWSTPSRLCLEILGG*GSRVQA
Trigger: AGCCTGGACCCGGGATCCCCATCCCCCTAGGATCTC...AAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320700.10
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp TACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTCACGGCGCTGAGGTCTaGGTCTCGCACCTCCTGCAC +
Preference number: 4 (lower is better)
Translates to: YRAAHHVSMAPGPRPADSHGAEV*VSHLLH
Trigger: GTGCAGGAGGTGCGAGACCCAGACCTCAGCGCCGTG...AGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp AGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTTCCCGGCCCAGGGGCTaGCTGCTCACAAAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: SSTSRVHGPWSTPSRLCLSRPRG*LLTKLY
Trigger: GTACAGCTTTGTGAGCAGCCAGCCCCTGGGCCGGGA...AAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp GCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGTACATCTCCTTGTACTaGTCCCGGCCCAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: AAHHVSMAPGPRPADSALYISLY*SRPRGW
Trigger: CCAGCCCCTGGGCCGGGACCAGTACAAGGAGATGTA...CAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp AGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTACATCTCCTTGTACTaGTCCCGGCCCAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RAAHHVSMAPGPRPADSAYISLY*SRPRGW
Trigger: CCAGCCCCTGGGCCGGGACCAGTACAAGGAGATGTA...GGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp AGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCGACGTCCTCGGGGTCTaGGTACAGGTAGGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: RAAHHVSMAPGPRPADSADVLGV*VQVGVH
Trigger: GTGGACACCTACCTGTACCCAGACCCCGAGGACGTC...GGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp GCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGGACGTCCTCGGGGTCTaGGTACAGGTAGGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: AAHHVSMAPGPRPADSALDVLGV*VQVGVH
Trigger: GTGGACACCTACCTGTACCCAGACCCCGAGGACGTC...CAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp GTACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCCTGAGTTGCCCACCGTaGTGTCGGCGCTGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: VQSSTSRVHGPWSTPSRLLSCPP*CRRCQG
Trigger: TCCCTGACAGCGCCGACACCACGGTGGGCAACTCAG...GAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp AGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTCTGAGTTGCCCACCGTaGTGTCGGCGCTGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: SSTSRVHGPWSTPSRLCLLSCPP*CRRCQG
Trigger: TCCCTGACAGCGCCGACACCACGGTGGGCAACTCAG...AAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp TACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGGAAGTCGTGCACGGTaGCCGACTGGGGCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: YRAAHHVSMAPGPRPADSGSRAR*PTGASG
Trigger: GCCTGAAGCCCCAGTCGGCCACCGTGCACGACTTCC...AGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp AGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCAGGCCGAATTCCTCCTaGAAGTCGTGCACGGTGGCC +
Preference number: 4 (lower is better)
Translates to: RAAHHVSMAPGPRPADSARPNSS*KSCTVA
Trigger: GGCCACCGTGCACGACTTCCAGGAGGAATTCGGCCT...GGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp GCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGAGGCCGAATTCCTCCTaGAAGTCGTGCACGGTGGCC +
Preference number: 4 (lower is better)
Translates to: AAHHVSMAPGPRPADSALRPNSS*KSCTVA
Trigger: GGCCACCGTGCACGACTTCCAGGAGGAATTCGGCCT...CAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp GGGGCCCGACCGGGAGCAGCTCATTTATTGAGCAGACATCTGCCGGGCAGTGCCCAGCCGACTCTGCCTTaGGGCCTCACTGAAGGGTGG +
Preference number: 4 (lower is better)
Translates to: GARPGAAHLLSRHLPGSAQPTLP*GLTEGW
Trigger: CCACCCTTCAGTGAGGCCCCAAGGCAGAGTCGGCTG...GGCACTGCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTCCCGGTCGGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp AGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTCAGCCGACTCTGCCTTaGGGCCTCACTGAAGGGTGG +
Preference number: 4 (lower is better)
Translates to: SSTSRVHGPWSTPSRLCLQPTLP*GLTEGW
Trigger: CCACCCTTCAGTGAGGCCCCAAGGCAGAGTCGGCTG...AAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp TCACTGAAGGGTGGCTGCCACCCTGAAGGGGCCACTGTTGGGCCATTCCTCAGACTCAGGCAGCGCAGCTaGGGGCACAGCTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SLKGGCHPEGATVGPFLRLRQRS*GHSSSW
Trigger: CCAGCTGGAGCTGTGCCCCCAGCTGCGCTGCCTGAG...TCTGAGGAATGGCCCAACAGTGGCCCCTTCAGGGTGGCAGCCACCCTTCAGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564065.5
CDS-3UTR CCA 90 bp TCACTGAAGGGTGGCTGCCACCCTGAAGGGGCCACTGTTGGGCCATTCCTCAGACTCCCAGGGCACTGCTaGGCTCTCAGGGACCGCTGC +
Preference number: 4 (lower is better)
Translates to: SLKGGCHPEGATVGPFLRLPGHC*ALRDRC
Trigger: GCAGCGGTCCCTGAGAGCCCAGCAGTGCCCTGGGAG...TCTGAGGAATGGCCCAACAGTGGCCCCTTCAGGGTGGCAGCCACCCTTCAGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564065.5
CDS-3UTR TCA 90 bp CAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGGGACACAGGACTGCACTaGCTCCCTCTGGCAGTAGCT +
Preference number: 4 (lower is better)
Translates to: QHITCPWPLVHAQPTLPWDTGLH*LPLAVA
Trigger: AGCTACTGCCAGAGGGAGTCAGTGCAGTCCTGTGTC...CCAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320700.10
ENST00000564065.5
CDS-3UTR TCA 90 bp GGGGCCCGACCGGGAGCAGCTCATTTATTGAGCAGACATCTGCCGGGCAGTGCCAGCTGCAGTCGGCGTTaGAGTCGCCCAGGAACAGCA +
Preference number: 4 (lower is better)
Translates to: GARPGAAHLLSRHLPGSASCSRR*SRPGTA
Trigger: TGCTGTTCCTGGGCGACTTCAACGCCGACTGCAGCT...GGCACTGCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTCCCGGTCGGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp GCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGCTGATGGCAAGAGCCTaGGTCTGGTCCAGGCCGAAT +
Preference number: 4 (lower is better)
Translates to: AAHHVSMAPGPRPADSALLMARA*VWSRPN
Trigger: ATTCGGCCTGGACCAGACTCAGGCTCTTGCCATCAG...CAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp TACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCTCACAACACCCCATaGGGTCGCTGGATGCAGCCC +
Preference number: 4 (lower is better)
Translates to: YRAAHHVSMAPGPRPADSAHNTP*GRWMQP
Trigger: GGGCTGCATCCAGCGACCTCATGGGGTGTTGTGAGC...AGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp AGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCGACACGCTGTTGATCTaGTCCATGAGCGCGGACACG +
Preference number: 4 (lower is better)
Translates to: RAAHHVSMAPGPRPADSADTLLI*SMSADT
Trigger: CGTGTCCGCGCTCATGGAGCAGATCAACAGCGTGTC...GGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp CAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGGGACACGCTGTTGATCTaGTCCATGAGCGCGGACACG +
Preference number: 4 (lower is better)
Translates to: QHITCPWPLVHAQPTLPWDTLLI*SMSADT
Trigger: CGTGTCCGCGCTCATGGAGCAGATCAACAGCGTGTC...CCAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp GGGGCCCGACCGGGAGCAGCTCATTTATTGAGCAGACATCTGCCGGGCAGTGCCGGCCCAGGGGCTGGCTaGTCACAAAGCTGTACTCGT +
Preference number: 4 (lower is better)
Translates to: GARPGAAHLLSRHLPGSAGPGAG*SQSCTR
Trigger: ACGAGTACAGCTTTGTGAGCAGCCAGCCCCTGGGCC...GGCACTGCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTCCCGGTCGGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp AGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGGCCCAGGGGCTGGCTaGTCACAAAGCTGTACTCGT +
Preference number: 4 (lower is better)
Translates to: SSTSRVHGPWSTPSRLCLGPGAG*SQSCTR
Trigger: ACGAGTACAGCTTTGTGAGCAGCCAGCCCCTGGGCC...AAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp TACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTCGCCACAGGCCACAATaGGGTCGTAGGCGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: YRAAHHVSMAPGPRPADSRHRPQ*GRRRSL
Trigger: CAGACTGCGCCTACGACCGCATTGTGGCCTGTGGCG...AGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp TCACTGAAGGGTGGCTGCCACCCTGAAGGGGCCACTGTTGGGCCATTCCTCAGAGGTCTGCAGGTGGCATaGCCCAGCCAGGCCTCGAGT +
Preference number: 4 (lower is better)
Translates to: SLKGGCHPEGATVGPFLRGLQVA*PSQASS
Trigger: ACTCGAGGCCTGGCTGGGGCATGCCACCTGCAGACC...TCTGAGGAATGGCCCAACAGTGGCCCCTTCAGGGTGGCAGCCACCCTTCAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp TCACTGAAGGGTGGCTGCCACCCTGAAGGGGCCACTGTTGGGCCATTCCTCAGACTCAGAGCCAGGGTCTaGAGGTGGCATGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: SLKGGCHPEGATVGPFLRLRARV*RWHAPA
Trigger: GGCTGGGGCATGCCACCTGCAGACCCTGGCTCTGAG...TCTGAGGAATGGCCCAACAGTGGCCCCTTCAGGGTGGCAGCCACCCTTCAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp GTACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTCACTGAAGGGTGGCTaGCACCCTGAAGGGGCCACT +
Preference number: 4 (lower is better)
Translates to: VQSSTSRVHGPWSTPSRLSLKGG*HPEGAT
Trigger: AGTGGCCCCTTCAGGGTGGCAGCCACCCTTCAGTGA...GAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp TACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTACGCCCAGCCGACTCTaGCTTGGGGCCTCACTGAAG +
Preference number: 4 (lower is better)
Translates to: YRAAHHVSMAPGPRPADSTPSRL*LGASLK
Trigger: CTTCAGTGAGGCCCCAAGGCAGAGTCGGCTGGGCGT...AGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp CAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGGTCAGCCACATCCCGGTaGGGCTGTGTTCTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: QHITCPWPLVHAQPTLPWSATSR*GCVLVL
Trigger: GAGGACAAGAACACAGCCGCACCGGGATGTGGCTGA...CCAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564065.5
CDS-3UTR GCA 90 bp AGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTAGGCTTGGATGTGGGTaGAGAGGCCCGAGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: SSTSRVHGPWSTPSRLCLRLGCG*RGPRLR
Trigger: TCTGAGCCTCGGGCCTCTGCACCCACATCCAAGCCT...AAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567494.5
CDS-3UTR CCA 90 bp TCACTGAAGGGTGGCTGCCACCCTGAAGGGGCCACTGTTGGGCCATTCCTCAGACTGCCGCCTTGGATGTaGGTGCAGAGGCCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: SLKGGCHPEGATVGPFLRLPPWM*VQRPEA
Trigger: AGCCTCGGGCCTCTGCACCCACATCCAAGGCGGCAG...TCTGAGGAATGGCCCAACAGTGGCCCCTTCAGGGTGGCAGCCACCCTTCAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320700.10
ENST00000613572.4
CDS-3UTR CCA 90 bp TCACTGAAGGGTGGCTGCCACCCTGAAGGGGCCACTGTTGGGCCATTCCTCAGACACGGCGCTGAGGTCTaGGTCTCGCACCTCCTGCAC +
Preference number: 4 (lower is better)
Translates to: SLKGGCHPEGATVGPFLRHGAEV*VSHLLH
Trigger: GTGCAGGAGGTGCGAGACCCAGACCTCAGCGCCGTG...TCTGAGGAATGGCCCAACAGTGGCCCCTTCAGGGTGGCAGCCACCCTTCAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp GTACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTACATCTCCTTGTACTaGTCCCGGCCCAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: VQSSTSRVHGPWSTPSRLYISLY*SRPRGW
Trigger: CCAGCCCCTGGGCCGGGACCAGTACAAGGAGATGTA...GAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp GTACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCGACGTCCTCGGGGTCTaGGTACAGGTAGGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: VQSSTSRVHGPWSTPSRLDVLGV*VQVGVH
Trigger: GTGGACACCTACCTGTACCCAGACCCCGAGGACGTC...GAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp AGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGACGTCCTCGGGGTCTaGGTACAGGTAGGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: SSTSRVHGPWSTPSRLCLDVLGV*VQVGVH
Trigger: GTGGACACCTACCTGTACCCAGACCCCGAGGACGTC...AAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp TACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTCTGAGTTGCCCACCGTaGTGTCGGCGCTGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: YRAAHHVSMAPGPRPADSLSCPP*CRRCQG
Trigger: TCCCTGACAGCGCCGACACCACGGTGGGCAACTCAG...AGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp AGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCGCCTCGAGTCATCGGTaGAACTTGAGGGTCACCTCC +
Preference number: 4 (lower is better)
Translates to: RAAHHVSMAPGPRPADSAASSHR*NLRVTS
Trigger: GGAGGTGACCCTCAAGTTCCACCGATGACTCGAGGC...GGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp CAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGGGCCTCGAGTCATCGGTaGAACTTGAGGGTCACCTCC +
Preference number: 4 (lower is better)
Translates to: QHITCPWPLVHAQPTLPWASSHR*NLRVTS
Trigger: GGAGGTGACCCTCAAGTTCCACCGATGACTCGAGGC...CCAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp AGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTCCGAGAGACTCACCTTaGATGTGGGTGCAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: SSTSRVHGPWSTPSRLCLPRDSP*MWVQRP
Trigger: GGGCCTCTGCACCCACATCCAAGGTGAGTCTCTCGG...AAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564065.5
CDS-3UTR TCA 90 bp AGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGACACAGGACTGCACTaGCTCCCTCTGGCAGTAGCT +
Preference number: 4 (lower is better)
Translates to: SSTSRVHGPWSTPSRLCLDTGLH*LPLAVA
Trigger: AGCTACTGCCAGAGGGAGTCAGTGCAGTCCTGTGTC...AAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320700.10
ENST00000564065.5
CDS-3UTR TCA 90 bp TACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTAGCTGCAGTCGGCGTTaGAGTCGCCCAGGAACAGCA +
Preference number: 4 (lower is better)
Translates to: YRAAHHVSMAPGPRPADSSCSRR*SRPGTA
Trigger: TGCTGTTCCTGGGCGACTTCAACGCCGACTGCAGCT...AGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp GGGGCCCGACCGGGAGCAGCTCATTTATTGAGCAGACATCTGCCGGGCAGTGCCCTGATGGCAAGAGCCTaGGTCTGGTCCAGGCCGAAT +
Preference number: 4 (lower is better)
Translates to: GARPGAAHLLSRHLPGSALMARA*VWSRPN
Trigger: ATTCGGCCTGGACCAGACTCAGGCTCTTGCCATCAG...GGCACTGCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTCCCGGTCGGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp CAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGGCTGGAAAGTGGTCGCTaGTGGCAAGAGCCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: QHITCPWPLVHAQPTLPWLESGR*WQEPES
Trigger: AGACTCAGGCTCTTGCCATCAGCGACCACTTTCCAG...CCAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp AGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCCTGGAAAGTGGTCGCTaGTGGCAAGAGCCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: RAAHHVSMAPGPRPADSALESGR*WQEPES
Trigger: AGACTCAGGCTCTTGCCATCAGCGACCACTTTCCAG...GGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp GCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGGTCATCGGTGGAACTTaGGGGTCACCTCCACTGGAA +
Preference number: 4 (lower is better)
Translates to: AAHHVSMAPGPRPADSALVIGGT*GSPPLE
Trigger: TTCCAGTGGAGGTGACCCTCAAGTTCCACCGATGAC...CAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp TCACTGAAGGGTGGCTGCCACCCTGAAGGGGCCACTGTTGGGCCATTCCTCAGAGCTCACAACACCCCATaGGGTCGCTGGATGCAGCCC +
Preference number: 4 (lower is better)
Translates to: SLKGGCHPEGATVGPFLRAHNTP*GRWMQP
Trigger: GGGCTGCATCCAGCGACCTCATGGGGTGTTGTGAGC...TCTGAGGAATGGCCCAACAGTGGCCCCTTCAGGGTGGCAGCCACCCTTCAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp AGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGACACGCTGTTGATCTaGTCCATGAGCGCGGACACG +
Preference number: 4 (lower is better)
Translates to: SSTSRVHGPWSTPSRLCLDTLLI*SMSADT
Trigger: CGTGTCCGCGCTCATGGAGCAGATCAACAGCGTGTC...AAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp TACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGGCCCAGGGGCTGGCTaGTCACAAAGCTGTACTCGT +
Preference number: 4 (lower is better)
Translates to: YRAAHHVSMAPGPRPADSGPGAG*SQSCTR
Trigger: ACGAGTACAGCTTTGTGAGCAGCCAGCCCCTGGGCC...AGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp AGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCACAGCATGTCGTCGGTaGCCCACTTGTCGATCACGT +
Preference number: 4 (lower is better)
Translates to: RAAHHVSMAPGPRPADSATACRR*PTCRSR
Trigger: ACGTGATCGACAAGTGGGGCACCGACGACATGCTGT...GGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp CAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGGACAGCATGTCGTCGGTaGCCCACTTGTCGATCACGT +
Preference number: 4 (lower is better)
Translates to: QHITCPWPLVHAQPTLPWTACRR*PTCRSR
Trigger: ACGTGATCGACAAGTGGGGCACCGACGACATGCTGT...CCAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp GGGGCCCGACCGGGAGCAGCTCATTTATTGAGCAGACATCTGCCGGGCAGTGCCCTACCCAGCATCTCCTaGTGCTGCTCCACCTGCTCA +
Preference number: 4 (lower is better)
Translates to: GARPGAAHLLSRHLPGSALPSIS*CCSTCS
Trigger: TGAGCAGGTGGAGCAGCAGCAGGAGATGCTGGGTAG...GGCACTGCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTCCCGGTCGGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564065.5
CDS-3UTR GCA 90 bp GTACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCAGGTCGCCTAGACTCTaGCTCCCTGAGCAGAATCCC +
Preference number: 4 (lower is better)
Translates to: VQSSTSRVHGPWSTPSRLRSPRL*LPEQNP
Trigger: GGGATTCTGCTCAGGGAGGCAGAGTCTAGGCGACCT...GAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564065.5
CDS-3UTR GCA 90 bp AGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCCTCGACTCAGCTGGGTaGCTGATGAACTCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: RAAHHVSMAPGPRPADSALDSAG*LMNSWL
Trigger: AAGCCAGGAGTTCATCAGGCACCCAGCTGAGTCGAG...GGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564065.5
CDS-3UTR GCA 90 bp TACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTCACCTTGGATGTGGGTaGAGAGGCCCGAGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: YRAAHHVSMAPGPRPADSHLGCG*RGPRLR
Trigger: TCTGAGCCTCGGGCCTCTGCACCCACATCCAAGGTG...AGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564065.5
CDS-3UTR CCA 90 bp TCACTGAAGGGTGGCTGCCACCCTGAAGGGGCCACTGTTGGGCCATTCCTCAGATCCCGGCCCAGGGGCTaGCTGCTCACAAAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: SLKGGCHPEGATVGPFLRSRPRG*LLTKLY
Trigger: GTACAGCTTTGTGAGCAGCCAGCCCCTGGGCCGGGA...TCTGAGGAATGGCCCAACAGTGGCCCCTTCAGGGTGGCAGCCACCCTTCAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp GGGGCCCGACCGGGAGCAGCTCATTTATTGAGCAGACATCTGCCGGGCAGTGCCGCCTCGAGTCATCGGTaGAACTTGAGGGTCACCTCC +
Preference number: 4 (lower is better)
Translates to: GARPGAAHLLSRHLPGSAASSHR*NLRVTS
Trigger: GGAGGTGACCCTCAAGTTCCACCGATGACTCGAGGC...GGCACTGCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTCCCGGTCGGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp GTACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCGCCTCGAGTCATCGGTaGAACTTGAGGGTCACCTCC +
Preference number: 4 (lower is better)
Translates to: VQSSTSRVHGPWSTPSRLASSHR*NLRVTS
Trigger: GGAGGTGACCCTCAAGTTCCACCGATGACTCGAGGC...GAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp TCACTGAAGGGTGGCTGCCACCCTGAAGGGGCCACTGTTGGGCCATTCCTCAGAAAGCTGCAGCCGGAATaGAGGGTCCGGCCCATCCAG +
Preference number: 4 (lower is better)
Translates to: SLKGGCHPEGATVGPFLRKLQPE*RVRPIQ
Trigger: CTGGATGGGCCGGACCCTCCATTCCGGCTGCAGCTT...TCTGAGGAATGGCCCAACAGTGGCCCCTTCAGGGTGGCAGCCACCCTTCAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564065.5
CDS-3UTR TCA 90 bp GGGGCCCGACCGGGAGCAGCTCATTTATTGAGCAGACATCTGCCGGGCAGTGCCCGAAGCTCTGAATGTTaGAGGCTCCGATGCGAAGCG +
Preference number: 4 (lower is better)
Translates to: GARPGAAHLLSRHLPGSARSSEC*RLRCEA
Trigger: CGCTTCGCATCGGAGCCTTCAACATTCAGAGCTTCG...GGCACTGCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTCCCGGTCGGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp AGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTCGAAGCTCTGAATGTTaGAGGCTCCGATGCGAAGCG +
Preference number: 4 (lower is better)
Translates to: SSTSRVHGPWSTPSRLCLRSSEC*RLRCEA
Trigger: CGCTTCGCATCGGAGCCTTCAACATTCAGAGCTTCG...AAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp CAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGGCTGTCACCGAAGCTCTaGATGTTGAAGGCTCCGATG +
Preference number: 4 (lower is better)
Translates to: QHITCPWPLVHAQPTLPWLSPKL*MLKAPM
Trigger: CATCGGAGCCTTCAACATTCAGAGCTTCGGTGACAG...CCAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp TACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTCTGATGGCAAGAGCCTaGGTCTGGTCCAGGCCGAAT +
Preference number: 4 (lower is better)
Translates to: YRAAHHVSMAPGPRPADSLMARA*VWSRPN
Trigger: ATTCGGCCTGGACCAGACTCAGGCTCTTGCCATCAG...AGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp AGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTCTGGAAAGTGGTCGCTaGTGGCAAGAGCCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: SSTSRVHGPWSTPSRLCLLESGR*WQEPES
Trigger: AGACTCAGGCTCTTGCCATCAGCGACCACTTTCCAG...AAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp GGGGCCCGACCGGGAGCAGCTCATTTATTGAGCAGACATCTGCCGGGCAGTGCCGTCATCGGTGGAACTTaGGGGTCACCTCCACTGGAA +
Preference number: 4 (lower is better)
Translates to: GARPGAAHLLSRHLPGSAVIGGT*GSPPLE
Trigger: TTCCAGTGGAGGTGACCCTCAAGTTCCACCGATGAC...GGCACTGCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTCCCGGTCGGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp AGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCGAGCAGCTCATTTATTaGGCAGACATCTGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: RAAHHVSMAPGPRPADSAEQLIY*ADICRA
Trigger: TGCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTC...GGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp CAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGGGAGCAGCTCATTTATTaGGCAGACATCTGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: QHITCPWPLVHAQPTLPWEQLIY*ADICRA
Trigger: TGCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTC...CCAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp TACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTTGTCCGACACAGGACTaGACTGACTCCCTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: YRAAHHVSMAPGPRPADSCPTQD*TDSLWQ
Trigger: CTGCCAGAGGGAGTCAGTGCAGTCCTGTGTCGGACA...AGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320700.10
ENST00000564065.5
CDS-3UTR GCA 90 bp GGGGCCCGACCGGGAGCAGCTCATTTATTGAGCAGACATCTGCCGGGCAGTGCCCGGGGTCCGACACTTTaGTGTCACCGAAGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: GARPGAAHLLSRHLPGSARGPTL*CHRSSE
Trigger: TTCAGAGCTTCGGTGACAGCAAAGTGTCGGACCCCG...GGCACTGCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTCCCGGTCGGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp GTACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCACAGCATGTCGTCGGTaGCCCACTTGTCGATCACGT +
Preference number: 4 (lower is better)
Translates to: VQSSTSRVHGPWSTPSRLTACRR*PTCRSR
Trigger: ACGTGATCGACAAGTGGGGCACCGACGACATGCTGT...GAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp TACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTCTGAGCCGGTTCTGGTaGCCCAGACCTGTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: YRAAHHVSMAPGPRPADSLSRFW*PRPVPK
Trigger: TTTTGGGACAGGTCTGGGGCACCAGAACCGGCTCAG...AGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564065.5
CDS-3UTR CCA 90 bp TCACTGAAGGGTGGCTGCCACCCTGAAGGGGCCACTGTTGGGCCATTCCTCAGATACATCTCCTTGTACTaGTCCCGGCCCAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SLKGGCHPEGATVGPFLRYISLY*SRPRGW
Trigger: CCAGCCCCTGGGCCGGGACCAGTACAAGGAGATGTA...TCTGAGGAATGGCCCAACAGTGGCCCCTTCAGGGTGGCAGCCACCCTTCAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp TCACTGAAGGGTGGCTGCCACCCTGAAGGGGCCACTGTTGGGCCATTCCTCAGAGACGTCCTCGGGGTCTaGGTACAGGTAGGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: SLKGGCHPEGATVGPFLRDVLGV*VQVGVH
Trigger: GTGGACACCTACCTGTACCCAGACCCCGAGGACGTC...TCTGAGGAATGGCCCAACAGTGGCCCCTTCAGGGTGGCAGCCACCCTTCAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp GGGGCCCGACCGGGAGCAGCTCATTTATTGAGCAGACATCTGCCGGGCAGTGCCCTGTCACCGAAGCTCTaGATGTTGAAGGCTCCGATG +
Preference number: 4 (lower is better)
Translates to: GARPGAAHLLSRHLPGSALSPKL*MLKAPM
Trigger: CATCGGAGCCTTCAACATTCAGAGCTTCGGTGACAG...GGCACTGCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTCCCGGTCGGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp TCACTGAAGGGTGGCTGCCACCCTGAAGGGGCCACTGTTGGGCCATTCCTCAGACTGATGGCAAGAGCCTaGGTCTGGTCCAGGCCGAAT +
Preference number: 4 (lower is better)
Translates to: SLKGGCHPEGATVGPFLRLMARA*VWSRPN
Trigger: ATTCGGCCTGGACCAGACTCAGGCTCTTGCCATCAG...TCTGAGGAATGGCCCAACAGTGGCCCCTTCAGGGTGGCAGCCACCCTTCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp TACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGTCATCGGTGGAACTTaGGGGTCACCTCCACTGGAA +
Preference number: 4 (lower is better)
Translates to: YRAAHHVSMAPGPRPADSVIGGT*GSPPLE
Trigger: TTCCAGTGGAGGTGACCCTCAAGTTCCACCGATGAC...AGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp GGGGCCCGACCGGGAGCAGCTCATTTATTGAGCAGACATCTGCCGGGCAGTGCCGAGCAGCTCATTTATTaGGCAGACATCTGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: GARPGAAHLLSRHLPGSAEQLIY*ADICRA
Trigger: TGCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTC...GGCACTGCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTCCCGGTCGGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp GTACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGGTCAACATGCCAATaGCACCCACACAGCACCAAG +
Preference number: 4 (lower is better)
Translates to: VQSSTSRVHGPWSTPSRLWSTCQ*HPHSTK
Trigger: CTTGGTGCTGTGTGGGTGTCATTGGCATGTTGACCA...GAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564065.5
CDS-3UTR GCA 90 bp TCACTGAAGGGTGGCTGCCACCCTGAAGGGGCCACTGTTGGGCCATTCCTCAGAGACACGCTGTTGATCTaGTCCATGAGCGCGGACACG +
Preference number: 4 (lower is better)
Translates to: SLKGGCHPEGATVGPFLRDTLLI*SMSADT
Trigger: CGTGTCCGCGCTCATGGAGCAGATCAACAGCGTGTC...TCTGAGGAATGGCCCAACAGTGGCCCCTTCAGGGTGGCAGCCACCCTTCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CCA 90 bp TCACTGAAGGGTGGCTGCCACCCTGAAGGGGCCACTGTTGGGCCATTCCTCAGAGCCTCGAGTCATCGGTaGAACTTGAGGGTCACCTCC +
Preference number: 4 (lower is better)
Translates to: SLKGGCHPEGATVGPFLRASSHR*NLRVTS
Trigger: GGAGGTGACCCTCAAGTTCCACCGATGACTCGAGGC...TCTGAGGAATGGCCCAACAGTGGCCCCTTCAGGGTGGCAGCCACCCTTCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp TCACTGAAGGGTGGCTGCCACCCTGAAGGGGCCACTGTTGGGCCATTCCTCAGACGAAGCTCTGAATGTTaGAGGCTCCGATGCGAAGCG +
Preference number: 4 (lower is better)
Translates to: SLKGGCHPEGATVGPFLRRSSEC*RLRCEA
Trigger: CGCTTCGCATCGGAGCCTTCAACATTCAGAGCTTCG...TCTGAGGAATGGCCCAACAGTGGCCCCTTCAGGGTGGCAGCCACCCTTCAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp TCACTGAAGGGTGGCTGCCACCCTGAAGGGGCCACTGTTGGGCCATTCCTCAGAGTCATCGGTGGAACTTaGGGGTCACCTCCACTGGAA +
Preference number: 4 (lower is better)
Translates to: SLKGGCHPEGATVGPFLRVIGGT*GSPPLE
Trigger: TTCCAGTGGAGGTGACCCTCAAGTTCCACCGATGAC...TCTGAGGAATGGCCCAACAGTGGCCCCTTCAGGGTGGCAGCCACCCTTCAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp TACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGAGCAGCTCATTTATTaGGCAGACATCTGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: YRAAHHVSMAPGPRPADSEQLIY*ADICRA
Trigger: TGCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTC...AGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp GGGGCCCGACCGGGAGCAGCTCATTTATTGAGCAGACATCTGCCGGGCAGTGCCACAAAGCTGTACTCGTaGTCGGACACGCTGTTGATC +
Preference number: 4 (lower is better)
Translates to: GARPGAAHLLSRHLPGSATKLYS*SDTLLI
Trigger: GATCAACAGCGTGTCCGAGCACGAGTACAGCTTTGT...GGCACTGCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTCCCGGTCGGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp TCACTGAAGGGTGGCTGCCACCCTGAAGGGGCCACTGTTGGGCCATTCCTCAGAACAGCATGTCGTCGGTaGCCCACTTGTCGATCACGT +
Preference number: 4 (lower is better)
Translates to: SLKGGCHPEGATVGPFLRTACRR*PTCRSR
Trigger: ACGTGATCGACAAGTGGGGCACCGACGACATGCTGT...TCTGAGGAATGGCCCAACAGTGGCCCCTTCAGGGTGGCAGCCACCCTTCAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR TCA 90 bp TCACTGAAGGGTGGCTGCCACCCTGAAGGGGCCACTGTTGGGCCATTCCTCAGAGAGCAGCTCATTTATTaGGCAGACATCTGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: SLKGGCHPEGATVGPFLREQLIY*ADICRA
Trigger: TGCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTC...TCTGAGGAATGGCCCAACAGTGGCCCCTTCAGGGTGGCAGCCACCCTTCAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR GCA 90 bp TCACTGAAGGGTGGCTGCCACCCTGAAGGGGCCACTGTTGGGCCATTCCTCAGAACAAAGCTGTACTCGTaGTCGGACACGCTGTTGATC +
Preference number: 4 (lower is better)
Translates to: SLKGGCHPEGATVGPFLRTKLYS*SDTLLI
Trigger: GATCAACAGCGTGTCCGAGCACGAGTACAGCTTTGT...TCTGAGGAATGGCCCAACAGTGGCCCCTTCAGGGTGGCAGCCACCCTTCAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS CCA 90 bp CGGCCAGCAGAGCCCGGGGCCCGCCCATGGCGCGGAGCGAGAGGCTaGGAGGGACAGACGCTGCCGCCTTGGATGTGGGTGCAGAGGCCC +
Preference number: 5 (lower is better)
Translates to: RPAEPGARPWRGARG*EGQTLPPWMWVQRP
Trigger: GGGCCTCTGCACCCACATCCAAGGCGGCAGCGTCTGTCCCTCCCAGCCTCTCGCTCCGCGCCATGGGCGGGCCCCGGGCTCTGCTGGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320700.10
ENST00000613572.4
CDS CCA 90 bp CGGCCAGCAGAGCCCGGGGCCCGCCCATGGCGCGGAGCGAGAGGCTaGGAGGGACAGACGCTGCCGCCTACGCAGACCCGCTGTCAGACC +
Preference number: 5 (lower is better)
Translates to: RPAEPGARPWRGARG*EGQTLPPTQTRCQT
Trigger: GGTCTGACAGCGGGTCTGCGTAGGCGGCAGCGTCTGTCCCTCCCAGCCTCTCGCTCCGCGCCATGGGCGGGCCCCGGGCTCTGCTGGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382437.8
ENST00000564065.5
CDS GCA 90 bp GGGCCCGCCCATGGCGCGGAGCGAGAGGCTGGGAGGGACAGACGCTaGCGCCTACGCAGACCCGCTGTCAGACCCACCGACCCACCCCTT +
Preference number: 5 (lower is better)
Translates to: GPAHGAEREAGRDRR*RLRRPAVRPTDPPL
Trigger: AAGGGGTGGGTCGGTGGGTCTGACAGCGGGTCTGCGTAGGCGGCAGCGTCTGTCCCTCCCAGCCTCTCGCTCCGCGCCATGGGCGGGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382437.8
ENST00000564065.5
CDS GCA 90 bp GGCTTGATGCGGCGCCGCGTGCAGCGGGATCAGCACCAGGTTCTGTaGTGCTGCGGGAAGGGGTGGGGGCGTCAGAGCTCGGCGGGAGGG +
Preference number: 5 (lower is better)
Translates to: GLMRRRVQRDQHQVL*CCGKGWGRQSSAGG
Trigger: CCCTCCCGCCGAGCTCTGACGCCCCCACCCCTTCCCGCAGCAGCACAGAACCTGGTGCTGATCCCGCTGCACGCGGCGCCGCATCAAGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320700.10
ENST00000564065.5
ENST00000567494.5
ENST00000569184.1
CDS GCA 90 bp ACTGGGGCTTCAGGCTCCGGCGCAGGCGGGCGCCACAGGCCACAATaGGGTCGTAGGCGCAGTCTGAGTTGCCCACCGTGGTGTCGGCGC +
Preference number: 5 (lower is better)
Translates to: TGASGSGAGGRHRPQ*GRRRSLSCPPWCRR
Trigger: GCGCCGACACCACGGTGGGCAACTCAGACTGCGCCTACGACCGCATTGTGGCCTGTGGCGCCCGCCTGCGCCGGAGCCTGAAGCCCCAGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000569184.1
ENST00000613572.4
CDS CCA 90 bp CCTGAGTCTGGTCCAGGCCGAATTCCTCCTGGAAGTCGTGCACGGTaGCCGACTGGGGCTTCAGGCTCCGGCGCAGGCGGGCGCCACAGG +
Preference number: 5 (lower is better)
Translates to: PESGPGRIPPGSRAR*PTGASGSGAGGRHR
Trigger: CCTGTGGCGCCCGCCTGCGCCGGAGCCTGAAGCCCCAGTCGGCCACCGTGCACGACTTCCAGGAGGAATTCGGCCTGGACCAGACTCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS GCA 90 bp TGCGACGCGGAATCCGCCCCTGCGTTCTGCAGGCTCCCAGGGCACTaGTGGGCTCTCAGGGACCGCTGCCTTCTCACTGCGCGGGAAGCT +
Preference number: 5 (lower is better)
Translates to: CDAESAPAFCRLPGH*WALRDRCLLTAREA
Trigger: AGCTTCCCGCGCAGTGAGAAGGCAGCGGTCCCTGAGAGCCCAGCAGTGCCCTGGGAGCCTGCAGAACGCAGGGGCGGATTCCGCGTCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564065.5
CDS CCA 90 bp TGGTCCAGGCCGAATTCCTCCTGGAAGTCGTGCACGGTGGCCGACTaGGGCTTCAGGCTCCGGCGCAGGCGGGCGCCACAGGCCACAATG +
Preference number: 5 (lower is better)
Translates to: WSRPNSSWKSCTVAD*GFRLRRRRAPQATM
Trigger: CATTGTGGCCTGTGGCGCCCGCCTGCGCCGGAGCCTGAAGCCCCAGTCGGCCACCGTGCACGACTTCCAGGAGGAATTCGGCCTGGACCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CAA 90 bp CAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGGCCGGGGGCCGAGAACTaGACCACGAAGGGCTCGCGG +
Preference number: 5 (lower is better)
Translates to: QHITCPWPLVHAQPTLPWPGAEN*TTKGSR
Trigger: CCGCGAGCCCTTCGTGGTCAAGTTCTCGGCCCCCGG...CCAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS TCA 90 bp GCGCAGGCGGGCGCCACAGGCCACAATGCGGTCGTAGGCGCAGTCTaGGTTGCCCACCGTGGTGTCGGCGCTGTCAGGGATGAGCCACTT +
Preference number: 5 (lower is better)
Translates to: AQAGATGHNAVVGAV*VAHRGVGAVRDEPL
Trigger: AAGTGGCTCATCCCTGACAGCGCCGACACCACGGTGGGCAACTCAGACTGCGCCTACGACCGCATTGTGGCCTGTGGCGCCCGCCTGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000569184.1
ENST00000613572.4
CDS CCA 90 bp CAGGGAGGGGCCGGGCTGCACTGGGTCCCGCCCCCTCGACTCAGCTaGGTGCCTGATGAACTCCTGGCTTTCATTCCCATGGAGACCCCC +
Preference number: 5 (lower is better)
Translates to: QGGAGLHWVPPPRLS*VPDELLAFIPMETP
Trigger: GGGGGTCTCCATGGGAATGAAAGCCAGGAGTTCATCAGGCACCCAGCTGAGTCGAGGGGGCGGGACCCAGTGCAGCCCGGCCCCTCCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564065.5
CDS-3UTR CAA 90 bp GTACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCCCGGGGGCCGAGAACTaGACCACGAAGGGCTCGCGG +
Preference number: 5 (lower is better)
Translates to: VQSSTSRVHGPWSTPSRLPGAEN*TTKGSR
Trigger: CCGCGAGCCCTTCGTGGTCAAGTTCTCGGCCCCCGG...GAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CAA 90 bp AGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGATCTCCGCCACGGCTaGATGCGGCGCCGCGTGCAG +
Preference number: 5 (lower is better)
Translates to: SSTSRVHGPWSTPSRLCLDLRHG*MRRRVQ
Trigger: CTGCACGCGGCGCCGCATCAAGCCGTGGCGGAGATC...AAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CAA 90 bp GGGGCCCGACCGGGAGCAGCTCATTTATTGAGCAGACATCTGCCGGGCAGTGCCGATCTCCGCCACGGCTaGATGCGGCGCCGCGTGCAG +
Preference number: 5 (lower is better)
Translates to: GARPGAAHLLSRHLPGSADLRHG*MRRRVQ
Trigger: CTGCACGCGGCGCCGCATCAAGCCGTGGCGGAGATC...GGCACTGCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTCCCGGTCGGGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS CCA 90 bp TTGGATGTGGGTGCAGAGGCCCGAGGCTCAGAGATCCTAGGGGGATaGGGATCCCGGGTCCAGGCTGCGGGCGTGTCCGACACAGGACTG +
Preference number: 5 (lower is better)
Translates to: LDVGAEARGSEILGG*GSRVQAAGVSDTGL
Trigger: CAGTCCTGTGTCGGACACGCCCGCAGCCTGGACCCGGGATCCCCATCCCCCTAGGATCTCTGAGCCTCGGGCCTCTGCACCCACATCCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320700.10
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CAA 90 bp GCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGACAGACGCTGCCGCCTaGGATGTGGGTGCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: AAHHVSMAPGPRPADSALTDAAA*DVGAEA
Trigger: GGCCTCTGCACCCACATCCAAGGCGGCAGCGTCTGT...CAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320700.10
ENST00000613572.4
CDS-3UTR CAA 90 bp TACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTCCGGGGGCCGAGAACTaGACCACGAAGGGCTCGCGG +
Preference number: 5 (lower is better)
Translates to: YRAAHHVSMAPGPRPADSPGAEN*TTKGSR
Trigger: CCGCGAGCCCTTCGTGGTCAAGTTCTCGGCCCCCGG...AGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CAA 90 bp TACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGATCTCCGCCACGGCTaGATGCGGCGCCGCGTGCAG +
Preference number: 5 (lower is better)
Translates to: YRAAHHVSMAPGPRPADSDLRHG*MRRRVQ
Trigger: CTGCACGCGGCGCCGCATCAAGCCGTGGCGGAGATC...AGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS TCA 90 bp CGCAAGCGGGGTCCGACACTTTGCTGTCACCGAAGCTCTGAATGTTaGAGGCTCCGATGCGAAGCGCGGCGGTCCCGGCGGCTTCCAGCG +
Preference number: 5 (lower is better)
Translates to: RKRGPTLCCHRSSEC*RLRCEARRSRRLPA
Trigger: CGCTGGAAGCCGCCGGGACCGCCGCGCTTCGCATCGGAGCCTTCAACATTCAGAGCTTCGGTGACAGCAAAGTGTCGGACCCCGCTTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000569184.1
ENST00000613572.4
CDS TCA 90 bp GGATGGCGGCCCAGTCCTGCGCCCGCACATAGCTGCAGTCGGCGTTaGAGTCGCCCAGGAACAGCATGTCGTCGGTGCCCCACTTGTCGA +
Preference number: 5 (lower is better)
Translates to: GWRPSPAPAHSCSRR*SRPGTACRRCPTCR
Trigger: TCGACAAGTGGGGCACCGACGACATGCTGTTCCTGGGCGACTTCAACGCCGACTGCAGCTATGTGCGGGCGCAGGACTGGGCCGCCATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS TCA 90 bp CAGCTCCAGCTGGGCAGGGCAGGAGGCTGTTGGTCAACATGCCAATaGCACCCACACAGCACCAAGGCGCCGCCAGGGCTGGCAGAAGCC +
Preference number: 5 (lower is better)
Translates to: QLQLGRAGGCWSTCQ*HPHSTKAPPGLAEA
Trigger: GGCTTCTGCCAGCCCTGGCGGCGCCTTGGTGCTGTGTGGGTGTCATTGGCATGTTGACCAACAGCCTCCTGCCCTGCCCAGCTGGAGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564065.5
CDS CCA 90 bp CACGCTGTTGATCTGCTCCATGAGCGCGGACACGGCGCTGAGGTCTaGGTCTCGCACCTCCTGCACCAGCGCGAGGTCATAGCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: HAVDLLHERGHGAEV*VSHLLHQREVIASQ
Trigger: CTGGCTGGCTATGACCTCGCGCTGGTGCAGGAGGTGCGAGACCCAGACCTCAGCGCCGTGTCCGCGCTCATGGAGCAGATCAACAGCGTG
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000569184.1
ENST00000613572.4
CDS-3UTR CAA 90 bp TCACTGAAGGGTGGCTGCCACCCTGAAGGGGCCACTGTTGGGCCATTCCTCAGACCGGGGGCCGAGAACTaGACCACGAAGGGCTCGCGG +
Preference number: 5 (lower is better)
Translates to: SLKGGCHPEGATVGPFLRPGAEN*TTKGSR
Trigger: CCGCGAGCCCTTCGTGGTCAAGTTCTCGGCCCCCGG...TCTGAGGAATGGCCCAACAGTGGCCCCTTCAGGGTGGCAGCCACCCTTCAGTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CAA 90 bp TCACTGAAGGGTGGCTGCCACCCTGAAGGGGCCACTGTTGGGCCATTCCTCAGAGATCTCCGCCACGGCTaGATGCGGCGCCGCGTGCAG +
Preference number: 5 (lower is better)
Translates to: SLKGGCHPEGATVGPFLRDLRHG*MRRRVQ
Trigger: CTGCACGCGGCGCCGCATCAAGCCGTGGCGGAGATC...TCTGAGGAATGGCCCAACAGTGGCCCCTTCAGGGTGGCAGCCACCCTTCAGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS TCA 90 bp ATGCTGCCGCAAGCGGGGTCCGACACTTTGCTGTCACCGAAGCTCTaGATGTTGAAGGCTCCGATGCGAAGCGCGGCGGTCCCGGCGGCT +
Preference number: 5 (lower is better)
Translates to: MLPQAGSDTLLSPKL*MLKAPMRSAAVPAA
Trigger: AGCCGCCGGGACCGCCGCGCTTCGCATCGGAGCCTTCAACATTCAGAGCTTCGGTGACAGCAAAGTGTCGGACCCCGCTTGCGGCAGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000569184.1
ENST00000613572.4
CDS-3UTR CAA 90 bp TACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTACAGACGCTGCCGCCTaGGATGTGGGTGCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: YRAAHHVSMAPGPRPADSTDAAA*DVGAEA
Trigger: GGCCTCTGCACCCACATCCAAGGCGGCAGCGTCTGT...AGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320700.10
ENST00000613572.4
CDS-3UTR CAA 90 bp CAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGGTCGTCGGTGCCCCACTaGTCGATCACGTCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: QHITCPWPLVHAQPTLPWSSVPH*SITSRY
Trigger: GTACCTGGACGTGATCGACAAGTGGGGCACCGACGA...CCAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CAA 90 bp GCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGTCGTCGGTGCCCCACTaGTCGATCACGTCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: AAHHVSMAPGPRPADSALSSVPH*SITSRY
Trigger: GTACCTGGACGTGATCGACAAGTGGGGCACCGACGA...CAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CAA 90 bp TCACTGAAGGGTGGCTGCCACCCTGAAGGGGCCACTGTTGGGCCATTCCTCAGAGGCAGGGGCCGGTATTaGAGGTCCTGGGCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: SLKGGCHPEGATVGPFLRGRGRY*RSWARE
Trigger: CTCCCTGGCCCAGGACCTCAAATACCGGCCCCTGCC...TCTGAGGAATGGCCCAACAGTGGCCCCTTCAGGGTGGCAGCCACCCTTCAGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564065.5
CDS-3UTR CAA 90 bp GGGGCCCGACCGGGAGCAGCTCATTTATTGAGCAGACATCTGCCGGGCAGTGCCGCCGAGAGACTCACCTaGGATGTGGGTGCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: GARPGAAHLLSRHLPGSAAERLT*DVGAEA
Trigger: GGCCTCTGCACCCACATCCAAGGTGAGTCTCTCGGC...GGCACTGCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTCCCGGTCGGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564065.5
CDS-3UTR CAA 90 bp AGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTTGCTCGGACACGCTGTaGATCTGCTCCATGAGCGCG +
Preference number: 5 (lower is better)
Translates to: SSTSRVHGPWSTPSRLCLCSDTL*ICSMSA
Trigger: CGCGCTCATGGAGCAGATCAACAGCGTGTCCGAGCA...AAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CAA 90 bp GTACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCTCGGACACGCTGTaGATCTGCTCCATGAGCGCG +
Preference number: 5 (lower is better)
Translates to: VQSSTSRVHGPWSTPSRLCSDTL*ICSMSA
Trigger: CGCGCTCATGGAGCAGATCAACAGCGTGTCCGAGCA...GAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CAA 90 bp CAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGGAACAGGTACATCTCCTaGTACTGGTCCCGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: QHITCPWPLVHAQPTLPWNRYIS*YWSRPR
Trigger: CCTGGGCCGGGACCAGTACAAGGAGATGTACCTGTT...CCAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CAA 90 bp GCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGAACAGGTACATCTCCTaGTACTGGTCCCGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: AAHHVSMAPGPRPADSALNRYIS*YWSRPR
Trigger: CCTGGGCCGGGACCAGTACAAGGAGATGTACCTGTT...CAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CAA 90 bp GGGGCCCGACCGGGAGCAGCTCATTTATTGAGCAGACATCTGCCGGGCAGTGCCTCGTCGGTGCCCCACTaGTCGATCACGTCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: GARPGAAHLLSRHLPGSASSVPH*SITSRY
Trigger: GTACCTGGACGTGATCGACAAGTGGGGCACCGACGA...GGCACTGCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTCCCGGTCGGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CAA 90 bp AGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTCTGAAGGGGCCACTGTaGGGCCATTCCTCAGAGCCA +
Preference number: 5 (lower is better)
Translates to: SSTSRVHGPWSTPSRLCLLKGPL*GHSSEP
Trigger: TGGCTCTGAGGAATGGCCCAACAGTGGCCCCTTCAG...AAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CAA 90 bp GTACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCAACAGGTACATCTCCTaGTACTGGTCCCGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: VQSSTSRVHGPWSTPSRLNRYIS*YWSRPR
Trigger: CCTGGGCCGGGACCAGTACAAGGAGATGTACCTGTT...GAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CAA 90 bp TACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTTCGTCGGTGCCCCACTaGTCGATCACGTCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: YRAAHHVSMAPGPRPADSSSVPH*SITSRY
Trigger: GTACCTGGACGTGATCGACAAGTGGGGCACCGACGA...AGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CAA 90 bp GCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGTCAGGGATGAGCCACTaGAAGACCTCACTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: AAHHVSMAPGPRPADSALSGMSH*KTSLLL
Trigger: GAGGAGCAGTGAGGTCTTCAAGTGGCTCATCCCTGA...CAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CAA 90 bp CAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGGTCAGGGATGAGCCACTaGAAGACCTCACTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: QHITCPWPLVHAQPTLPWSGMSH*KTSLLL
Trigger: GAGGAGCAGTGAGGTCTTCAAGTGGCTCATCCCTGA...CCAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CAA 90 bp AGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCAGTCATCGGTGGAACTaGAGGGTCACCTCCACTGGA +
Preference number: 5 (lower is better)
Translates to: RAAHHVSMAPGPRPADSASHRWN*RVTSTG
Trigger: TCCAGTGGAGGTGACCCTCAAGTTCCACCGATGACT...GGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CAA 90 bp GCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCTTGGGAGCAGCTCATTTATaGAGCAGACATCTGCCGGGC +
Preference number: 5 (lower is better)
Translates to: AAHHVSMAPGPRPADSALGAAHL*SRHLPG
Trigger: GCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTCC...CAAGGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CAA 90 bp AGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCGGAGCAGCTCATTTATaGAGCAGACATCTGCCGGGC +
Preference number: 5 (lower is better)
Translates to: RAAHHVSMAPGPRPADSAGAAHL*SRHLPG
Trigger: GCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTCC...GGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CAA 90 bp AGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTGCCCAGGGCAGGAGGCTGTaGGTCAACATGCCAATGACA +
Preference number: 5 (lower is better)
Translates to: RAAHHVSMAPGPRPADSAQGRRL*VNMPMT
Trigger: TGTCATTGGCATGTTGACCAACAGCCTCCTGCCCTG...GGCAGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564065.5
CDS CCA 90 bp GAACTTGACCACGAAGGGCTCGCGGCTGAAGACGTCCTCGGGGTCTaGGTACAGGTAGGTGTCCACGACCGACACCGCGTCTTTCCTGTA +
Preference number: 5 (lower is better)
Translates to: ELDHEGLAAEDVLGV*VQVGVHDRHRVFPV
Trigger: TACAGGAAAGACGCGGTGTCGGTCGTGGACACCTACCTGTACCCAGACCCCGAGGACGTCTTCAGCCGCGAGCCCTTCGTGGTCAAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000569184.1
ENST00000613572.4
CDS-3UTR CAA 90 bp TCACTGAAGGGTGGCTGCCACCCTGAAGGGGCCACTGTTGGGCCATTCCTCAGATGCTCGGACACGCTGTaGATCTGCTCCATGAGCGCG +
Preference number: 5 (lower is better)
Translates to: SLKGGCHPEGATVGPFLRCSDTL*ICSMSA
Trigger: CGCGCTCATGGAGCAGATCAACAGCGTGTCCGAGCA...TCTGAGGAATGGCCCAACAGTGGCCCCTTCAGGGTGGCAGCCACCCTTCAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CAA 90 bp TACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTAACAGGTACATCTCCTaGTACTGGTCCCGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: YRAAHHVSMAPGPRPADSNRYIS*YWSRPR
Trigger: CCTGGGCCGGGACCAGTACAAGGAGATGTACCTGTT...AGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CAA 90 bp GTACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTCAGGGATGAGCCACTaGAAGACCTCACTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: VQSSTSRVHGPWSTPSRLSGMSH*KTSLLL
Trigger: GAGGAGCAGTGAGGTCTTCAAGTGGCTCATCCCTGA...GAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CAA 90 bp GTACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCAGTCATCGGTGGAACTaGAGGGTCACCTCCACTGGA +
Preference number: 5 (lower is better)
Translates to: VQSSTSRVHGPWSTPSRLSHRWN*RVTSTG
Trigger: TCCAGTGGAGGTGACCCTCAAGTTCCACCGATGACT...GAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CAA 90 bp TCACTGAAGGGTGGCTGCCACCCTGAAGGGGCCACTGTTGGGCCATTCCTCAGACTGAAGGGGCCACTGTaGGGCCATTCCTCAGAGCCA +
Preference number: 5 (lower is better)
Translates to: SLKGGCHPEGATVGPFLRLKGPL*GHSSEP
Trigger: TGGCTCTGAGGAATGGCCCAACAGTGGCCCCTTCAG...TCTGAGGAATGGCCCAACAGTGGCCCCTTCAGGGTGGCAGCCACCCTTCAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CAA 90 bp GGGGCCCGACCGGGAGCAGCTCATTTATTGAGCAGACATCTGCCGGGCAGTGCCGGAGCAGCTCATTTATaGAGCAGACATCTGCCGGGC +
Preference number: 5 (lower is better)
Translates to: GARPGAAHLLSRHLPGSAGAAHL*SRHLPG
Trigger: GCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTCC...GGCACTGCCCGGCAGATGTCTGCTCAATAAATGAGCTGCTCCCGGTCGGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CAA 90 bp TACAGAGCAGCACATCACGTGTCCATGGCCCCTGGTCCACGCCCAGCCGACTCTTCAGGGATGAGCCACTaGAAGACCTCACTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: YRAAHHVSMAPGPRPADSSGMSH*KTSLLL
Trigger: GAGGAGCAGTGAGGTCTTCAAGTGGCTCATCCCTGA...AGAGTCGGCTGGGCGTGGACCAGGGGCCATGGACACGTGATGTGCTGCTCTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS-3UTR CAA 90 bp TCACTGAAGGGTGGCTGCCACCCTGAAGGGGCCACTGTTGGGCCATTCCTCAGAGGTGCGGCTGTGTTCTaGTCCTCGCCCCTAGAAATT +
Preference number: 5 (lower is better)
Translates to: SLKGGCHPEGATVGPFLRGAAVF*SSPLEI
Trigger: AATTTCTAGGGGCGAGGACAAGAACACAGCCGCACC...TCTGAGGAATGGCCCAACAGTGGCCCCTTCAGGGTGGCAGCCACCCTTCAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564065.5
CDS GCA 90 bp GCTGTGTTCTTGTCCTCGCCCCTAGAAATTAGGTCGCCTAGACTCTaGCTCCCTGAGCAGAATCCCTTCAGGGAAAGCAAGGCAGCGCAG +
Preference number: 5 (lower is better)
Translates to: AVFLSSPLEIRSPRL*LPEQNPFRESKAAQ
Trigger: CTGCGCTGCCTTGCTTTCCCTGAAGGGATTCTGCTCAGGGAGGCAGAGTCTAGGCGACCTAATTTCTAGGGGCGAGGACAAGAACACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564065.5
CDS CCA 72 bp GAGCCCGGGGCCCGCCCATGGCGCGGAGCGAGAGGCTaGGAGGGACAGACGCTGCCGCCTACGCAGACCCGC +
Preference number: 6 (lower is better)
Translates to: EPGARPWRGARG*EGQTLPPTQTR
Trigger: GCGGGTCTGCGTAGGCGGCAGCGTCTGTCCCTCCCAGCCTCTCGCTCCGCGCCATGGGCGGGCCCCGGGCTC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382437.8
ENST00000564065.5
CDS CCA 72 bp GAGCCCGGGGCCCGCCCATGGCGCGGAGCGAGAGGCTaGGAGGGACAGACGCTGCCGCCTTGGATGTGGGTG +
Preference number: 6 (lower is better)
Translates to: EPGARPWRGARG*EGQTLPPWMWV
Trigger: CACCCACATCCAAGGCGGCAGCGTCTGTCCCTCCCAGCCTCTCGCTCCGCGCCATGGGCGGGCCCCGGGCTC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320700.10
ENST00000613572.4
CDS CCA 72 bp CCCAGAGTGCGGCCAGCAGAGCCCGGGGCCCGCCCATaGCGCGGAGCGAGAGGCTTGGATGTGGGTGCAGAG +
Preference number: 6 (lower is better)
Translates to: PRVRPAEPGARP*RGARGLDVGAE
Trigger: CTCTGCACCCACATCCAAGCCTCTCGCTCCGCGCCATGGGCGGGCCCCGGGCTCTGCTGGCCGCACTCTGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567494.5
CDS CAA 72 bp GGCGGGGCCCGCTCACCGGTGCCGGGGGCCGAGAACTaGACCACGAAGGGCTCGCGGCTGAAGACGTCCTCG +
Preference number: 6 (lower is better)
Translates to: GGARSPVPGAEN*TTKGSRLKTSS
Trigger: CGAGGACGTCTTCAGCCGCGAGCCCTTCGTGGTCAAGTTCTCGGCCCCCGGCACCGGTGAGCGGGCCCCGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320700.10
ENST00000564065.5
ENST00000567494.5
ENST00000569184.1
CDS GCA 72 bp CGCCGCGTGCAGCGGGATCAGCACCAGGTTCTGTGCTaGTGCGGGAAGGGGTGGGGGCGTCAGAGCTCGGCG +
Preference number: 6 (lower is better)
Translates to: RRVQRDQHQVLC*CGKGWGRQSSA
Trigger: CGCCGAGCTCTGACGCCCCCACCCCTTCCCGCAGCAGCACAGAACCTGGTGCTGATCCCGCTGCACGCGGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320700.10
ENST00000564065.5
ENST00000567494.5
ENST00000569184.1
CDS GCA 72 bp CGGCGCCGCGTGCAGCGGGATCAGCACCAGGTTCTGTaGTGCTGCGGGAAGGGGTGGGGGCGTCAGAGCTCG +
Preference number: 6 (lower is better)
Translates to: RRRVQRDQHQVL*CCGKGWGRQSS
Trigger: CGAGCTCTGACGCCCCCACCCCTTCCCGCAGCAGCACAGAACCTGGTGCTGATCCCGCTGCACGCGGCGCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320700.10
ENST00000564065.5
ENST00000567494.5
ENST00000569184.1
CDS GCA 72 bp TCAGGCTCCGGCGCAGGCGGGCGCCACAGGCCACAATaGGGTCGTAGGCGCAGTCTGAGTTGCCCACCGTGG +
Preference number: 6 (lower is better)
Translates to: SGSGAGGRHRPQ*GRRRSLSCPPW
Trigger: CCACGGTGGGCAACTCAGACTGCGCCTACGACCGCATTGTGGCCTGTGGCGCCCGCCTGCGCCGGAGCCTGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000569184.1
ENST00000613572.4
CDS GCA 72 bp CATGGCGCGGAGCGAGAGGCTGGGAGGGACAGACGCTaGCGCCTACGCAGACCCGCTGTCAGACCCACCGAC +
Preference number: 6 (lower is better)
Translates to: HGAEREAGRDRR*RLRRPAVRPTD
Trigger: GTCGGTGGGTCTGACAGCGGGTCTGCGTAGGCGGCAGCGTCTGTCCCTCCCAGCCTCTCGCTCCGCGCCATG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382437.8
ENST00000564065.5
CDS CCA 72 bp CCGAATTCCTCCTGGAAGTCGTGCACGGTGGCCGACTaGGGCTTCAGGCTCCGGCGCAGGCGGGCGCCACAG +
Preference number: 6 (lower is better)
Translates to: PNSSWKSCTVAD*GFRLRRRRAPQ
Trigger: CTGTGGCGCCCGCCTGCGCCGGAGCCTGAAGCCCCAGTCGGCCACCGTGCACGACTTCCAGGAGGAATTCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS CCA 72 bp GGTCCAGGCCGAATTCCTCCTGGAAGTCGTGCACGGTaGCCGACTGGGGCTTCAGGCTCCGGCGCAGGCGGG +
Preference number: 6 (lower is better)
Translates to: GPGRIPPGSRAR*PTGASGSGAGG
Trigger: CCCGCCTGCGCCGGAGCCTGAAGCCCCAGTCGGCCACCGTGCACGACTTCCAGGAGGAATTCGGCCTGGACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS GCA 72 bp TCTCAGGGACCGCTGCCTTCTCACTGCGCGGGAAGCTaGAGCCGGAATGGAGGGTCCGGCCCATCCAGCCCC +
Preference number: 6 (lower is better)
Translates to: SQGPLPSHCAGS*SRNGGSGPSSP
Trigger: GGGGCTGGATGGGCCGGACCCTCCATTCCGGCTGCAGCTTCCCGCGCAGTGAGAAGGCAGCGGTCCCTGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564065.5
CDS GCA 72 bp GAATCCGCCCCTGCGTTCTGCAGGCTCCCAGGGCACTaGTGGGCTCTCAGGGACCGCTGCCTTCTCACTGCG +
Preference number: 6 (lower is better)
Translates to: ESAPAFCRLPGH*WALRDRCLLTA
Trigger: CGCAGTGAGAAGGCAGCGGTCCCTGAGAGCCCAGCAGTGCCCTGGGAGCCTGCAGAACGCAGGGGCGGATTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564065.5
CDS TCA 72 bp GGCGCCACAGGCCACAATGCGGTCGTAGGCGCAGTCTaGGTTGCCCACCGTGGTGTCGGCGCTGTCAGGGAT +
Preference number: 6 (lower is better)
Translates to: GATGHNAVVGAV*VAHRGVGAVRD
Trigger: ATCCCTGACAGCGCCGACACCACGGTGGGCAACTCAGACTGCGCCTACGACCGCATTGTGGCCTGTGGCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000569184.1
ENST00000613572.4
CDS CCA 72 bp CACGAAGGGCTCGCGGCTGAAGACGTCCTCGGGGTCTaGGTACAGGTAGGTGTCCACGACCGACACCGCGTC +
Preference number: 6 (lower is better)
Translates to: HEGLAAEDVLGV*VQVGVHDRHRV
Trigger: GACGCGGTGTCGGTCGTGGACACCTACCTGTACCCAGACCCCGAGGACGTCTTCAGCCGCGAGCCCTTCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000569184.1
ENST00000613572.4
CDS CAA 72 bp AGCACCAGGTTCTGTGCGGTGCCGGGGGCCGAGAACTaGACCACGAAGGGCTCGCGGCTGAAGACGTCCTCG +
Preference number: 6 (lower is better)
Translates to: STRFCAVPGAEN*TTKGSRLKTSS
Trigger: CGAGGACGTCTTCAGCCGCGAGCCCTTCGTGGTCAAGTTCTCGGCCCCCGGCACCGCACAGAACCTGGTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382437.8
ENST00000613572.4
CDS TCA 72 bp CTGGGCAGGGCAGGAGGCTGTTGGTCAACATGCCAATaGCACCCACACAGCACCAAGGCGCCGCCAGGGCTG +
Preference number: 6 (lower is better)
Translates to: LGRAGGCWSTCQ*HPHSTKAPPGL
Trigger: CAGCCCTGGCGGCGCCTTGGTGCTGTGTGGGTGTCATTGGCATGTTGACCAACAGCCTCCTGCCCTGCCCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564065.5
CDS TCA 72 bp GTCCAGGCTGCGGGCGTGTCCGACACAGGACTGCACTaGCTCCCTCTGGCAGTAGCTCTGGCACCAAGGCAG +
Preference number: 6 (lower is better)
Translates to: VQAAGVSDTGLH*LPLAVALAPRQ
Trigger: CTGCCTTGGTGCCAGAGCTACTGCCAGAGGGAGTCAGTGCAGTCCTGTGTCGGACACGCCCGCAGCCTGGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564065.5
CDS CCA 72 bp GATCTGCTCCATGAGCGCGGACACGGCGCTGAGGTCTaGGTCTCGCACCTCCTGCACCAGCGCGAGGTCATA +
Preference number: 6 (lower is better)
Translates to: DLLHERGHGAEV*VSHLLHQREVI
Trigger: TATGACCTCGCGCTGGTGCAGGAGGTGCGAGACCCAGACCTCAGCGCCGTGTCCGCGCTCATGGAGCAGATC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000569184.1
ENST00000613572.4
CDS CCA 72 bp TCCAGCCCCAGCTCAGGGCAGCCGAGAGACTCACCTTaGATGTGGGTGCAGAGGCCCGAGGCTCAGAGATCC +
Preference number: 6 (lower is better)
Translates to: SSPSSGQPRDSP*MWVQRPEAQRS
Trigger: GGATCTCTGAGCCTCGGGCCTCTGCACCCACATCCAAGGTGAGTCTCTCGGCTGCCCTGAGCTGGGGCTGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564065.5
CDS CAA 72 bp CCCACCGTGGTGTCGGCGCTGTCAGGGATGAGCCACTaGAAGACCTCACTGCTCCTCAGACGGATGGCGGCC +
Preference number: 6 (lower is better)
Translates to: PTVVSALSGMSH*KTSLLLRRMAA
Trigger: GGCCGCCATCCGTCTGAGGAGCAGTGAGGTCTTCAAGTGGCTCATCCCTGACAGCGCCGACACCACGGTGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000569184.1
ENST00000613572.4
CDS TCA 72 bp GGTCCGACACTTTGCTGTCACCGAAGCTCTGAATGTTaGAGGCTCCGATGCGAAGCGCGGCGGTCCCGGCGG +
Preference number: 6 (lower is better)
Translates to: GPTLCCHRSSEC*RLRCEARRSRR
Trigger: CCGCCGGGACCGCCGCGCTTCGCATCGGAGCCTTCAACATTCAGAGCTTCGGTGACAGCAAAGTGTCGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000569184.1
ENST00000613572.4
CDS CAA 90 bp TCTGAGTTGCCCACCGTGGTGTCGGCGCTGTCAGGGATGAGCCACTaGAAGACCTCACTGCTCCTCAGACGGATGGCGGCCCAGTCCTGC +
Preference number: 6 (lower is better)
Translates to: SELPTVVSALSGMSH*KTSLLLRRMAAQSC
Trigger: GCAGGACTGGGCCGCCATCCGTCTGAGGAGCAGTGAGGTCTTCAAGTGGCTCATCCCTGACAGCGCCGACACCACGGTGGGCAACTCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000613572.4
CDS CAA 90 bp TCTGAGTTGCCCACCGTGGTGTCGGCGCTGTCAGGGATGAGCCACTaGAAGACCTCACTGCTCCTCAGACGGATGGCGGCCCAGTCGTCG +
Preference number: 6 (lower is better)
Translates to: SELPTVVSALSGMSH*KTSLLLRRMAAQSS
Trigger: CGACGACTGGGCCGCCATCCGTCTGAGGAGCAGTGAGGTCTTCAAGTGGCTCATCCCTGACAGCGCCGACACCACGGTGGGCAACTCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569184.1
CDS GCA 72 bp GGCTGCACTGGGTCCCGCCCCCTCGACTCAGCTGGGTaGCTGATGAACTCCTGGCTTTCATTCCCATGGAGA +
Preference number: 6 (lower is better)
Translates to: GCTGSRPLDSAG*LMNSWLSFPWR
Trigger: TCTCCATGGGAATGAAAGCCAGGAGTTCATCAGGCACCCAGCTGAGTCGAGGGGGCGGGACCCAGTGCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564065.5
CDS CAA 72 bp GGGGGCACAGCTCCAGCTGGGCAGGGCAGGAGGCTGTaGGTCAACATGCCAATGACACCCACACAGCACCAA +
Preference number: 6 (lower is better)
Translates to: GGTAPAGQGRRL*VNMPMTPTQHQ
Trigger: TTGGTGCTGTGTGGGTGTCATTGGCATGTTGACCAACAGCCTCCTGCCCTGCCCAGCTGGAGCTGTGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564065.5
CDS TCA 72 bp CAAGCGGGGTCCGACACTTTGCTGTCACCGAAGCTCTaGATGTTGAAGGCTCCGATGCGAAGCGCGGCGGTC +
Preference number: 6 (lower is better)
Translates to: QAGSDTLLSPKL*MLKAPMRSAAV
Trigger: GACCGCCGCGCTTCGCATCGGAGCCTTCAACATTCAGAGCTTCGGTGACAGCAAAGTGTCGGACCCCGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000569184.1
ENST00000613572.4
CDS GCA 72 bp ACATCTCCTTGTACTGGTCCCGGCCCAGGGGCTGGCTaGTCACAAAGCTGTACTCGTGCTCGGACACGCTGT +
Preference number: 6 (lower is better)
Translates to: TSPCTGPGPGAG*SQSCTRARTRC
Trigger: ACAGCGTGTCCGAGCACGAGTACAGCTTTGTGAGCAGCCAGCCCCTGGGCCGGGACCAGTACAAGGAGATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000569184.1
ENST00000613572.4
CDS CCA 72 bp AGGTACATCTCCTTGTACTGGTCCCGGCCCAGGGGCTaGCTGCTCACAAAGCTGTACTCGTGCTCGGACACG +
Preference number: 6 (lower is better)
Translates to: RYISLYWSRPRG*LLTKLYSCSDT
Trigger: CGTGTCCGAGCACGAGTACAGCTTTGTGAGCAGCCAGCCCCTGGGCCGGGACCAGTACAAGGAGATGTACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320700.10
ENST00000382437.8
ENST00000564065.5
ENST00000567494.5
ENST00000569184.1
ENST00000613572.4
CDS CAA 90 bp AGGAGGGAGGTAGACGGTCAGCCACATCCCGGTGCGGCTGTGTTCTaGTCCTCGCCCCTAGAAATTAGGTCGCCTAGACTCTGCCTCCCT +
Preference number: 6 (lower is better)
Translates to: RREVDGQPHPGAAVF*SSPLEIRSPRLCLP
Trigger: AGGGAGGCAGAGTCTAGGCGACCTAATTTCTAGGGGCGAGGACAAGAACACAGCCGCACCGGGATGTGGCTGACCGTCTACCTCCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564065.5
CDS CAA 72 bp GTAGACGGTCAGCCACATCCCGGTGCGGCTGTGTTCTaGTCCTCGCCCCTAGAAATTAGGTCGCCTAGACTC +
Preference number: 6 (lower is better)
Translates to: VDGQPHPGAAVF*SSPLEIRSPRL
Trigger: GAGTCTAGGCGACCTAATTTCTAGGGGCGAGGACAAGAACACAGCCGCACCGGGATGTGGCTGACCGTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564065.5
CDS GCA 72 bp TTGTCCTCGCCCCTAGAAATTAGGTCGCCTAGACTCTaGCTCCCTGAGCAGAATCCCTTCAGGGAAAGCAAG +
Preference number: 6 (lower is better)
Translates to: LSSPLEIRSPRL*LPEQNPFRESK
Trigger: CTTGCTTTCCCTGAAGGGATTCTGCTCAGGGAGGCAGAGTCTAGGCGACCTAATTTCTAGGGGCGAGGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564065.5