RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DNALI1 (Homo sapiens)

Ensembl gene IDs: ENSG00000163879

Ensembl transcript IDs: ENST00000296218.8, ENST00000466723.1, ENST00000467277.1, ENST00000490312.1, ENST00000497858.1, ENST00000652629.1

Found 301 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTCTGGGGAAATGACAGTGCTTCCATTGTGAGCCTTGAAGCTCACTaGACCCAAGACGGATGGCAGGTGGAAGCTCTGCTAAGGAGAGGC +
Preference number: 1 (lower is better)
Translates to: FWGNDSASIVSLEAH*TQDGWQVEALLRRG
Trigger: GCCTCTCCTTAGCAGAGCTTCCACCTGCCATCCGTCTTGGGTTCAGTGAGCTTCAAGGCTCACAATGGAAGCACTGTCATTTCCCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR TCA 90 bp CATAGGGAACACAGCTTTTCTGGGGAAATGACAGTGCTTCCATTGTaGGCCTTGAAGCTCACTGAACCCAAGACGGATGGCAGGTGGAAG +
Preference number: 1 (lower is better)
Translates to: HREHSFSGEMTVLPL*ALKLTEPKTDGRWK
Trigger: CTTCCACCTGCCATCCGTCTTGGGTTCAGTGAGCTTCAAGGCTCACAATGGAAGCACTGTCATTTCCCCAGAAAAGCTGTGTTCCCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR TCA 90 bp CTCAGGATACTGGATCAGGGTAAAAGCTGCTCCTTAGATTCCAGATaGGAATGTGTATGGTGTGTTCAGCATAGGGAACACAGCTTTTCT +
Preference number: 1 (lower is better)
Translates to: LRILDQGKSCSLDSR*ECVWCVQHREHSFS
Trigger: AGAAAAGCTGTGTTCCCTATGCTGAACACACCATACACATTCTCATCTGGAATCTAAGGAGCAGCTTTTACCCTGATCCAGTATCCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR CCA 90 bp AAGCATACAGAACTGCAAATTTCAAGGACGTTAGTGTACATGGCCTaGCCTTTGAAATACAAGGAGAAAGTTGGGTGCAGAAGAAATAGG +
Preference number: 1 (lower is better)
Translates to: KHTELQISRTLVYMA*PLKYKEKVGCRRNR
Trigger: CCTATTTCTTCTGCACCCAACTTTCTCCTTGTATTTCAAAGGCCAGGCCATGTACACTAACGTCCTTGAAATTTGCAGTTCTGTATGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR CCA 90 bp TTTATGTCACTCATTCAATCTTCTGGGTCTACAAAACCAGGAGAATaGAAGAGAAATACTAAAATGCAGTTGTCTAGCAGCCGTACTCCA +
Preference number: 1 (lower is better)
Translates to: FMSLIQSSGSTKPGE*KRNTKMQLSSSRTP
Trigger: TGGAGTACGGCTGCTAGACAACTGCATTTTAGTATTTCTCTTCCATTCTCCTGGTTTTGTAGACCCAGAAGATTGAATGAGTGACATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR-3UTR CCA 90 bp AGTGATGATGAGAAAGCAGTGGCTTTCTTAGAATTTGAGTTGGCAGTTCCCAAGGCCCAGCCAGGAGCCTaGCTGGCAGACCTTAGGTGT +
Preference number: 2 (lower is better)
Translates to: SDDEKAVAFLEFELAVPKAQPGA*LADLRC
Trigger: ACACCTAAGGTCTGCCAGCCAGGCTCCTGGCTGGGC...CTTGGGAACTGCCAACTCAAATTCTAAGAAAGCCACTGCTTTCTCATCATCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR CAA 90 bp CTGAAGGATGAAGTCCTCCAGCTTACCACCCTAGCCCACCCTGGCTaGCCCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGT +
Preference number: 2 (lower is better)
Translates to: LKDEVLQLTTLAHPG*PRTKDLCHSFNLLG
Trigger: ACCCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGGGCAAGCCAGGGTGGGCTAGGGTGGTAAGCTGGAGGACTTCATCCTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR-3UTR CCA 90 bp ATGTCACTCATTCAATCTTCTGGGTCTACAAAACCAGGAGAATGGAAGAGAAATGCCCAGCCAGGAGCCTaGCTGGCAGACCTTAGGTGT +
Preference number: 2 (lower is better)
Translates to: MSLIQSSGSTKPGEWKRNAQPGA*LADLRC
Trigger: ACACCTAAGGTCTGCCAGCCAGGCTCCTGGCTGGGC...ATTTCTCTTCCATTCTCCTGGTTTTGTAGACCCAGAAGATTGAATGAGTGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR-3UTR GCA 90 bp AGTTGTCTAGCAGCCGTACTCCAATTATTAGTCATTAGACCTGCATGTGAGATTCACACCATCTTCCATTaGCCAGCCAGGAGCCTGGCT +
Preference number: 2 (lower is better)
Translates to: SCLAAVLQLLVIRPACEIHTIFH*PARSLA
Trigger: AGCCAGGCTCCTGGCTGGGCAATGGAAGATGGTGTG...AATCTCACATGCAGGTCTAATGACTAATAATTGGAGTACGGCTGCTAGACAACT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR-3UTR TCA 90 bp AATTTCAAGGACGTTAGTGTACATGGCCTGGCCTTTGAAATACAAGGAGAAAGTAGCCTTGAAGCTCACTaGACCCAAGACGGATGGCAG +
Preference number: 2 (lower is better)
Translates to: NFKDVSVHGLAFEIQGESSLEAH*TQDGWQ
Trigger: CTGCCATCCGTCTTGGGTTCAGTGAGCTTCAAGGCT...ACTTTCTCCTTGTATTTCAAAGGCCAGGCCATGTACACTAACGTCCTTGAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR-3UTR TCA 90 bp CCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGTCTACAAAACCAGGAGGAAGGGGTCCAGTTaGCTGGCAAGTGGGGATAAT +
Preference number: 2 (lower is better)
Translates to: PELKIYVTHSIFWVYKTRRKGSS*LASGDN
Trigger: ATTATCCCCACTTGCCAGTCAACTGGACCCCTTCCT...CCTGGTTTTGTAGACCCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR-3UTR TCA 90 bp CCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGTCTACAAAACCAGGTGCTGGGGGAAGAGCTaGGTTGCAGACAACTCACAA +
Preference number: 2 (lower is better)
Translates to: PELKIYVTHSIFWVYKTRCWGKS*VADNSQ
Trigger: TTGTGAGTTGTCTGCAACTCAGCTCTTCCCCCAGCA...CCTGGTTTTGTAGACCCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR-3UTR TCA 90 bp AGTTGTCTAGCAGCCGTACTCCAATTATTAGTCATTAGACCTGCATGTGAGATTTGCTGGGGGAAGAGCTaGGTTGCAGACAACTCACAA +
Preference number: 2 (lower is better)
Translates to: SCLAAVLQLLVIRPACEICWGKS*VADNSQ
Trigger: TTGTGAGTTGTCTGCAACTCAGCTCTTCCCCCAGCA...AATCTCACATGCAGGTCTAATGACTAATAATTGGAGTACGGCTGCTAGACAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR-3UTR GCA 90 bp CCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGTCTACAAAACCAGGGGGGAAGAGCTGAGTTaGAGACAACTCACAAAGGCC +
Preference number: 2 (lower is better)
Translates to: PELKIYVTHSIFWVYKTRGEELS*RQLTKA
Trigger: GGCCTTTGTGAGTTGTCTGCAACTCAGCTCTTCCCC...CCTGGTTTTGTAGACCCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR-3UTR TCA 90 bp CCCACCCTGGCTTGCCCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGTAGAAGATGAATTGTaGACTAAAAGTTTGAGGGGC +
Preference number: 2 (lower is better)
Translates to: PTLACPELKIYVTHSIFWVEDEL*TKSLRG
Trigger: GCCCCTCAAACTTTTAGTTCACAATTCATCTTCTAC...CCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGGGCAAGCCAGGGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR-3UTR GCA 90 bp ATTCAATCTTCTGGGTCTACAAAACCAGGAGAATGGAAGAGAAATACTAAAATGCACACCATCTTCCATTaGCCAGCCAGGAGCCTGGCT +
Preference number: 2 (lower is better)
Translates to: IQSSGSTKPGEWKRNTKMHTIFH*PARSLA
Trigger: AGCCAGGCTCCTGGCTGGGCAATGGAAGATGGTGTG...CATTTTAGTATTTCTCTTCCATTCTCCTGGTTTTGTAGACCCAGAAGATTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR-3UTR CCA 90 bp ATTCAATCTTCTGGGTCTACAAAACCAGGAGAATGGAAGAGAAATACTAAAATGGGCAGTTCCCAAGGCTaGCTAGTAAGCCACACACGG +
Preference number: 2 (lower is better)
Translates to: IQSSGSTKPGEWKRNTKMGSSQG*LVSHTR
Trigger: CCGTGTGTGGCTTACTAGCCAGCCTTGGGAACTGCC...CATTTTAGTATTTCTCTTCCATTCTCCTGGTTTTGTAGACCCAGAAGATTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR-3UTR TCA 90 bp CCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGTCTACAAAACCAGGGGCTTTCTTAGAATTTaGGTTGGCAGTTCCCAAGGC +
Preference number: 2 (lower is better)
Translates to: PELKIYVTHSIFWVYKTRGFLRI*VGSSQG
Trigger: GCCTTGGGAACTGCCAACTCAAATTCTAAGAAAGCC...CCTGGTTTTGTAGACCCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR-3UTR TCA 90 bp CCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGTCTACAAAACCAGGTCACAAAGGCCACTGTaGCTAGTATTCCTTTCTGGC +
Preference number: 2 (lower is better)
Translates to: PELKIYVTHSIFWVYKTRSQRPL*LVFLSG
Trigger: GCCAGAAAGGAATACTAGTCACAGTGGCCTTTGTGA...CCTGGTTTTGTAGACCCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR-3UTR TCA 90 bp GTCACCCTGTCATATAACTGTCTGACAGAAATAGGGGATGAGGTCTATAAAATGACAGTGCTTCCATTGTaGGCCTTGAAGCTCACTGAA +
Preference number: 2 (lower is better)
Translates to: VTLSYNCLTEIGDEVYKMTVLPL*ALKLTE
Trigger: TTCAGTGAGCTTCAAGGCTCACAATGGAAGCACTGT...CATTTTATAGACCTCATCCCCTATTTCTGTCAGACAGTTATATGACAGGGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR-3UTR TCA 90 bp AATTTCAAGGACGTTAGTGTACATGGCCTGGCCTTTGAAATACAAGGAGAAAGTACAGTGCTTCCATTGTaGGCCTTGAAGCTCACTGAA +
Preference number: 2 (lower is better)
Translates to: NFKDVSVHGLAFEIQGESTVLPL*ALKLTE
Trigger: TTCAGTGAGCTTCAAGGCTCACAATGGAAGCACTGT...ACTTTCTCCTTGTATTTCAAAGGCCAGGCCATGTACACTAACGTCCTTGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR-3UTR CCA 90 bp AGTTGTCTAGCAGCCGTACTCCAATTATTAGTCATTAGACCTGCATGTGAGATTAGGGGTCCAGTTGACTaGCAAGTGGGGATAATACAT +
Preference number: 2 (lower is better)
Translates to: SCLAAVLQLLVIRPACEIRGPVD*QVGIIH
Trigger: ATGTATTATCCCCACTTGCCAGTCAACTGGACCCCT...AATCTCACATGCAGGTCTAATGACTAATAATTGGAGTACGGCTGCTAGACAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR-3UTR CCA 90 bp AATTTCAAGGACGTTAGTGTACATGGCCTGGCCTTTGAAATACAAGGAGAAAGTGGAACACAGCTTTTCTaGGGAAATGACAGTGCTTCC +
Preference number: 2 (lower is better)
Translates to: NFKDVSVHGLAFEIQGESGTQLF*GNDSAS
Trigger: GGAAGCACTGTCATTTCCCCAGAAAAGCTGTGTTCC...ACTTTCTCCTTGTATTTCAAAGGCCAGGCCATGTACACTAACGTCCTTGAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR-3UTR TCA 90 bp TTGCCCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGTCTACAAAACGGCTTTCTTAGAATTTaGGTTGGCAGTTCCCAAGGC +
Preference number: 2 (lower is better)
Translates to: LPRTKDLCHSFNLLGLQNGFLRI*VGSSQG
Trigger: GCCTTGGGAACTGCCAACTCAAATTCTAAGAAAGCC...GTTTTGTAGACCCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR-3UTR TCA 90 bp ATTCAATCTTCTGGGTCTACAAAACCAGGAGAATGGAAGAGAAATACTAAAATGAGGAAGGGGTCCAGTTaGCTGGCAAGTGGGGATAAT +
Preference number: 2 (lower is better)
Translates to: IQSSGSTKPGEWKRNTKMRKGSS*LASGDN
Trigger: ATTATCCCCACTTGCCAGTCAACTGGACCCCTTCCT...CATTTTAGTATTTCTCTTCCATTCTCCTGGTTTTGTAGACCCAGAAGATTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR-3UTR TCA 90 bp AATTTCAAGGACGTTAGTGTACATGGCCTGGCCTTTGAAATACAAGGAGAAAGTTCTTTCCCATGGAAATaGCAACACAGGCAGGTCATT +
Preference number: 2 (lower is better)
Translates to: NFKDVSVHGLAFEIQGESSFPWK*QHRQVI
Trigger: AATGACCTGCCTGTGTTGTCATTTCCATGGGAAAGA...ACTTTCTCCTTGTATTTCAAAGGCCAGGCCATGTACACTAACGTCCTTGAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR-3UTR TCA 90 bp GTCACCCTGTCATATAACTGTCTGACAGAAATAGGGGATGAGGTCTATAAAATGACATGGCCTGGCCTTTaGAATACAAGGAGAAAGTTG +
Preference number: 2 (lower is better)
Translates to: VTLSYNCLTEIGDEVYKMTWPGL*NTRRKL
Trigger: CAACTTTCTCCTTGTATTTCAAAGGCCAGGCCATGT...CATTTTATAGACCTCATCCCCTATTTCTGTCAGACAGTTATATGACAGGGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR-3UTR GCA 90 bp ATTCAATCTTCTGGGTCTACAAAACCAGGAGAATGGAAGAGAAATACTAAAATGGGGGAAGAGCTGAGTTaGAGACAACTCACAAAGGCC +
Preference number: 2 (lower is better)
Translates to: IQSSGSTKPGEWKRNTKMGEELS*RQLTKA
Trigger: GGCCTTTGTGAGTTGTCTGCAACTCAGCTCTTCCCC...CATTTTAGTATTTCTCTTCCATTCTCCTGGTTTTGTAGACCCAGAAGATTGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR-3UTR GCA 90 bp AATTTCAAGGACGTTAGTGTACATGGCCTGGCCTTTGAAATACAAGGAGAAAGTCAGGGCTTGATTTTCTaGAGGATAAGGGGAACAGAT +
Preference number: 2 (lower is better)
Translates to: NFKDVSVHGLAFEIQGESQGLIF*RIRGTD
Trigger: ATCTGTTCCCCTTATCCTGCAGAAAATCAAGCCCTG...ACTTTCTCCTTGTATTTCAAAGGCCAGGCCATGTACACTAACGTCCTTGAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR-3UTR CCA 90 bp CCCACCCTGGCTTGCCCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGTCCCAAGTGTCTTGTTaGAAATTAATCATGTGGAAA +
Preference number: 2 (lower is better)
Translates to: PTLACPELKIYVTHSIFWSQVSC*KLIMWK
Trigger: TTTCCACATGATTAATTTCCAACAAGACACTTGGGA...CCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGGGCAAGCCAGGGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR-3UTR CCA 90 bp GTCACCCTGTCATATAACTGTCTGACAGAAATAGGGGATGAGGTCTATAAAATGGGCAGGTCATTTGAGTaGAGGCTTAAAATTCCTCAG +
Preference number: 2 (lower is better)
Translates to: VTLSYNCLTEIGDEVYKMGRSFE*RLKIPQ
Trigger: CTGAGGAATTTTAAGCCTCCACTCAAATGACCTGCC...CATTTTATAGACCTCATCCCCTATTTCTGTCAGACAGTTATATGACAGGGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR-3UTR TCA 90 bp TTGCCCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGTCTACAAAACCCAAAGCCATGGGTTTaGCTGCCATTGTTTCCTAAT +
Preference number: 2 (lower is better)
Translates to: LPRTKDLCHSFNLLGLQNPKPWV*LPLFPN
Trigger: ATTAGGAAACAATGGCAGTCAAACCCATGGCTTTGG...GTTTTGTAGACCCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR-3UTR TCA 90 bp CCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGTCTACAAAACCAGGGTAGAAGATGAATTGTaGACTAAAAGTTTGAGGGGC +
Preference number: 2 (lower is better)
Translates to: PELKIYVTHSIFWVYKTRVEDEL*TKSLRG
Trigger: GCCCCTCAAACTTTTAGTTCACAATTCATCTTCTAC...CCTGGTTTTGTAGACCCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR-3UTR TCA 90 bp CCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGTCTACAAAACCAGGACCAAAGCTCCAAAGTaGGTTAGAAATGCATTAGAG +
Preference number: 2 (lower is better)
Translates to: PELKIYVTHSIFWVYKTRTKAPK*VRNALE
Trigger: CTCTAATGCATTTCTAACTCACTTTGGAGCTTTGGT...CCTGGTTTTGTAGACCCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR-3UTR TCA 90 bp ATTCAATCTTCTGGGTCTACAAAACCAGGAGAATGGAAGAGAAATACTAAAATGTCACAAAGGCCACTGTaGCTAGTATTCCTTTCTGGC +
Preference number: 2 (lower is better)
Translates to: IQSSGSTKPGEWKRNTKMSQRPL*LVFLSG
Trigger: GCCAGAAAGGAATACTAGTCACAGTGGCCTTTGTGA...CATTTTAGTATTTCTCTTCCATTCTCCTGGTTTTGTAGACCCAGAAGATTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR-3UTR TCA 90 bp AATTTCAAGGACGTTAGTGTACATGGCCTGGCCTTTGAAATACAAGGAGAAAGTTCCTTAGATTCCAGATaGGAATGTGTATGGTGTGTT +
Preference number: 2 (lower is better)
Translates to: NFKDVSVHGLAFEIQGESSLDSR*ECVWCV
Trigger: AACACACCATACACATTCTCATCTGGAATCTAAGGA...ACTTTCTCCTTGTATTTCAAAGGCCAGGCCATGTACACTAACGTCCTTGAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR-3UTR TCA 90 bp GTCACCCTGTCATATAACTGTCTGACAGAAATAGGGGATGAGGTCTATAAAATGTCCTTAGATTCCAGATaGGAATGTGTATGGTGTGTT +
Preference number: 2 (lower is better)
Translates to: VTLSYNCLTEIGDEVYKMSLDSR*ECVWCV
Trigger: AACACACCATACACATTCTCATCTGGAATCTAAGGA...CATTTTATAGACCTCATCCCCTATTTCTGTCAGACAGTTATATGACAGGGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR-3UTR CCA 90 bp ATTCAATCTTCTGGGTCTACAAAACCAGGAGAATGGAAGAGAAATACTAAAATGAGGGGTCCAGTTGACTaGCAAGTGGGGATAATACAT +
Preference number: 2 (lower is better)
Translates to: IQSSGSTKPGEWKRNTKMRGPVD*QVGIIH
Trigger: ATGTATTATCCCCACTTGCCAGTCAACTGGACCCCT...CATTTTAGTATTTCTCTTCCATTCTCCTGGTTTTGTAGACCCAGAAGATTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR-3UTR GCA 90 bp CCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGTCTACAAAACCAGGAGAGAAATACTAAAATaGAGTTGTCTAGCAGCCGTA +
Preference number: 2 (lower is better)
Translates to: PELKIYVTHSIFWVYKTRREILK*SCLAAV
Trigger: TACGGCTGCTAGACAACTGCATTTTAGTATTTCTCT...CCTGGTTTTGTAGACCCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR-3UTR CCA 90 bp CCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGTCTACAAAACCAGGTCCCAAGTGTCTTGTTaGAAATTAATCATGTGGAAA +
Preference number: 2 (lower is better)
Translates to: PELKIYVTHSIFWVYKTRSQVSC*KLIMWK
Trigger: TTTCCACATGATTAATTTCCAACAAGACACTTGGGA...CCTGGTTTTGTAGACCCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR CCA 72 bp AGGGCCACACCATCTTCCATTGCCCAGCCAGGAGCCTaGCTGGCAGACCTTAGGTGTCTGATGACATTGGAG +
Preference number: 3 (lower is better)
Translates to: RATPSSIAQPGA*LADLRCLMTLE
Trigger: CTCCAATGTCATCAGACACCTAAGGTCTGCCAGCCAGGCTCCTGGCTGGGCAATGGAAGATGGTGTGGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR TCA 72 bp AATGACAGTGCTTCCATTGTGAGCCTTGAAGCTCACTaGACCCAAGACGGATGGCAGGTGGAAGCTCTGCTA +
Preference number: 3 (lower is better)
Translates to: NDSASIVSLEAH*TQDGWQVEALL
Trigger: TAGCAGAGCTTCCACCTGCCATCCGTCTTGGGTTCAGTGAGCTTCAAGGCTCACAATGGAAGCACTGTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR-3UTR CAA 90 bp TTGCCCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGTCTACAAAACGGGGGAAGAGCTGAGTaGCAGACAACTCACAAAGGC +
Preference number: 3 (lower is better)
Translates to: LPRTKDLCHSFNLLGLQNGGRAE*QTTHKG
Trigger: GCCTTTGTGAGTTGTCTGCAACTCAGCTCTTCCCCC...GTTTTGTAGACCCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGGGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR-3UTR CAA 90 bp AATTTCAAGGACGTTAGTGTACATGGCCTGGCCTTTGAAATACAAGGAGAAAGTCTAGCCCACCCTGGCTaGCCCCGAACTAAAGATTTA +
Preference number: 3 (lower is better)
Translates to: NFKDVSVHGLAFEIQGESLAHPG*PRTKDL
Trigger: TAAATCTTTAGTTCGGGGCAAGCCAGGGTGGGCTAG...ACTTTCTCCTTGTATTTCAAAGGCCAGGCCATGTACACTAACGTCCTTGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR TCA 72 bp CTGGATCAGGGTAAAAGCTGCTCCTTAGATTCCAGATaGGAATGTGTATGGTGTGTTCAGCATAGGGAACAC +
Preference number: 3 (lower is better)
Translates to: LDQGKSCSLDSR*ECVWCVQHREH
Trigger: GTGTTCCCTATGCTGAACACACCATACACATTCTCATCTGGAATCTAAGGAGCAGCTTTTACCCTGATCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR-3UTR CAA 90 bp CCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGTCTACAAAACCAGGGTGCAGAGTCAGGGCTaGATTTTCTGCAGGATAAGG +
Preference number: 3 (lower is better)
Translates to: PELKIYVTHSIFWVYKTRVQSQG*IFCRIR
Trigger: CCTTATCCTGCAGAAAATCAAGCCCTGACTCTGCAC...CCTGGTTTTGTAGACCCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR TCA 72 bp GCCTCCTCAACCTTAAGGATTTCAGTGATAAGAGTCTaGAAGTCTAGCACTTCAGGTAGACTTTGGATGAAC +
Preference number: 3 (lower is better)
Translates to: ASSTLRISVIRV*KSSTSGRLWMN
Trigger: GTTCATCCAAAGTCTACCTGAAGTGCTAGACTTTCAGACTCTTATCACTGAAATCCTTAAGGTTGAGGAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR-3UTR CAA 90 bp TTGCCCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGTCTACAAAACTTCTTAGAATTTGAGTaGGCAGTTCCCAAGGCTGGC +
Preference number: 3 (lower is better)
Translates to: LPRTKDLCHSFNLLGLQNFLEFE*AVPKAG
Trigger: GCCAGCCTTGGGAACTGCCAACTCAAATTCTAAGAA...GTTTTGTAGACCCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR-3UTR CAA 90 bp GTCACCCTGTCATATAACTGTCTGACAGAAATAGGGGATGAGGTCTATAAAATGACACAGGCAGGTCATTaGAGTGGAGGCTTAAAATTC +
Preference number: 3 (lower is better)
Translates to: VTLSYNCLTEIGDEVYKMTQAGH*SGGLKF
Trigger: GAATTTTAAGCCTCCACTCAAATGACCTGCCTGTGT...CATTTTATAGACCTCATCCCCTATTTCTGTCAGACAGTTATATGACAGGGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR TCA 72 bp GAGAAAACTACAATAATTTCTGCCTCATTGAGTCTGTaGAGTAGACCCACTTATGGCACATACGTTCCTGTC +
Preference number: 3 (lower is better)
Translates to: EKTTIISASLSL*SRPTYGTYVPV
Trigger: GACAGGAACGTATGTGCCATAAGTGGGTCTACTTCACAGACTCAATGAGGCAGAAATTATTGTAGTTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR-3UTR CAA 90 bp AATTTCAAGGACGTTAGTGTACATGGCCTGGCCTTTGAAATACAAGGAGAAAGTAATACTAAAATGCAGTaGTCTAGCAGCCGTACTCCA +
Preference number: 3 (lower is better)
Translates to: NFKDVSVHGLAFEIQGESNTKMQ*SSSRTP
Trigger: TGGAGTACGGCTGCTAGACAACTGCATTTTAGTATT...ACTTTCTCCTTGTATTTCAAAGGCCAGGCCATGTACACTAACGTCCTTGAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR-3UTR CAA 90 bp AGTTGTCTAGCAGCCGTACTCCAATTATTAGTCATTAGACCTGCATGTGAGATTCTCCCAAGTGTCTTGTaGGAAATTAATCATGTGGAA +
Preference number: 3 (lower is better)
Translates to: SCLAAVLQLLVIRPACEILPSVL*EINHVE
Trigger: TTCCACATGATTAATTTCCAACAAGACACTTGGGAG...AATCTCACATGCAGGTCTAATGACTAATAATTGGAGTACGGCTGCTAGACAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR-3UTR CAA 90 bp CCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGTCTACAAAACCAGGCTCCCAAGTGTCTTGTaGGAAATTAATCATGTGGAA +
Preference number: 3 (lower is better)
Translates to: PELKIYVTHSIFWVYKTRLPSVL*EINHVE
Trigger: TTCCACATGATTAATTTCCAACAAGACACTTGGGAG...CCTGGTTTTGTAGACCCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
3UTR-3UTR CAA 90 bp ATTCAATCTTCTGGGTCTACAAAACCAGGAGAATGGAAGAGAAATACTAAAATGTTCTTAGAATTTGAGTaGGCAGTTCCCAAGGCTGGC +
Preference number: 3 (lower is better)
Translates to: IQSSGSTKPGEWKRNTKMFLEFE*AVPKAG
Trigger: GCCAGCCTTGGGAACTGCCAACTCAAATTCTAAGAA...CATTTTAGTATTTCTCTTCCATTCTCCTGGTTTTGTAGACCCAGAAGATTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CCA 90 bp CCCACCCTGGCTTGCCCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGCCCAGCCAGGAGCCTaGCTGGCAGACCTTAGGTGT +
Preference number: 4 (lower is better)
Translates to: PTLACPELKIYVTHSIFWAQPGA*LADLRC
Trigger: ACACCTAAGGTCTGCCAGCCAGGCTCCTGGCTGGGC...CCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGGGCAAGCCAGGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR GCA 90 bp CCCACCCTGGCTTGCCCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGTGCCAAACGCCACGCTaGTCTCGTACAGGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: PTLACPELKIYVTHSIFWCQTPR*SRTGSG
Trigger: ACCAGACCCTGTACGAGAGCAGCGTGGCGTTTGGCA...CCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGGGCAAGCCAGGGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR GCA 90 bp CCCACCCTGGCTTGCCCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGCACACCATCTTCCATTaGCCAGCCAGGAGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: PTLACPELKIYVTHSIFWHTIFH*PARSLA
Trigger: AGCCAGGCTCCTGGCTGGGCAATGGAAGATGGTGTG...CCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGGGCAAGCCAGGGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp AGTGATGATGAGAAAGCAGTGGCTTTCTTAGAATTTGAGTTGGCAGTTCCCAAGCAGGCTGCTGGGGGCTaGCTTTCAGTAGCCGAGCCT +
Preference number: 4 (lower is better)
Translates to: SDDEKAVAFLEFELAVPKQAAGG*LSVAEP
Trigger: AGGCTCGGCTACTGAAAGTCAGCCCCCAGCAGCCTG...CTTGGGAACTGCCAACTCAAATTCTAAGAAAGCCACTGCTTTCTCATCATCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp CCCACCCTGGCTTGCCCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGAGCCTTGAAGCTCACTaGACCCAAGACGGATGGCAG +
Preference number: 4 (lower is better)
Translates to: PTLACPELKIYVTHSIFWSLEAH*TQDGWQ
Trigger: CTGCCATCCGTCTTGGGTTCAGTGAGCTTCAAGGCT...CCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGGGCAAGCCAGGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CCA 90 bp CCCACCCTGGCTTGCCCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGTGCTGGACACCTGCTaGATCCATAGCTGCGTGTCT +
Preference number: 4 (lower is better)
Translates to: PTLACPELKIYVTHSIFWVLDTC*IHSCVS
Trigger: AGACACGCAGCTATGGATCCAGCAGGTGTCCAGCAC...CCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGGGCAAGCCAGGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp AGTGATGATGAGAAAGCAGTGGCTTTCTTAGAATTTGAGTTGGCAGTTCCCAAGCTGGGGTGTCGTACTTaGGCAAAGAGTCTGCGGGCG +
Preference number: 4 (lower is better)
Translates to: SDDEKAVAFLEFELAVPKLGCRT*AKSLRA
Trigger: CGCCCGCAGACTCTTTGCTCAAGTACGACACCCCAG...CTTGGGAACTGCCAACTCAAATTCTAAGAAAGCCACTGCTTTCTCATCATCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp CCCACCCTGGCTTGCCCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGTGCTGGGGGAAGAGCTaGGTTGCAGACAACTCACAA +
Preference number: 4 (lower is better)
Translates to: PTLACPELKIYVTHSIFWCWGKS*VADNSQ
Trigger: TTGTGAGTTGTCTGCAACTCAGCTCTTCCCCCAGCA...CCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGGGCAAGCCAGGGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR GCA 90 bp AGTTGTCTAGCAGCCGTACTCCAATTATTAGTCATTAGACCTGCATGTGAGATTTTCTTCTCCTCCACCTaGCGCCTCTCGCTCTCCCGC +
Preference number: 4 (lower is better)
Translates to: SCLAAVLQLLVIRPACEIFFSST*RLSLSR
Trigger: GCGGGAGAGCGAGAGGCGGCAGGTGGAGGAGAAGAA...AATCTCACATGCAGGTCTAATGACTAATAATTGGAGTACGGCTGCTAGACAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CCA 90 bp AGTGATGATGAGAAAGCAGTGGCTTTCTTAGAATTTGAGTTGGCAGTTCCCAAGAGATGCCTGTTTCCCTaGCCTGCCGCTGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: SDDEKAVAFLEFELAVPKRCLFP*PAAAAA
Trigger: AGCTGCAGCAGCGGCAGGCCAGGGAAACAGGCATCT...CTTGGGAACTGCCAACTCAAATTCTAAGAAAGCCACTGCTTTCTCATCATCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CCA 90 bp AGTTGTCTAGCAGCCGTACTCCAATTATTAGTCATTAGACCTGCATGTGAGATTGCCCAGCCAGGAGCCTaGCTGGCAGACCTTAGGTGT +
Preference number: 4 (lower is better)
Translates to: SCLAAVLQLLVIRPACEIAQPGA*LADLRC
Trigger: ACACCTAAGGTCTGCCAGCCAGGCTCCTGGCTGGGC...AATCTCACATGCAGGTCTAATGACTAATAATTGGAGTACGGCTGCTAGACAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp ATGTCACTCATTCAATCTTCTGGGTCTACAAAACCAGGAGAATGGAAGAGAAATCAGGCTGCTGGGGGCTaGCTTTCAGTAGCCGAGCCT +
Preference number: 4 (lower is better)
Translates to: MSLIQSSGSTKPGEWKRNQAAGG*LSVAEP
Trigger: AGGCTCGGCTACTGAAAGTCAGCCCCCAGCAGCCTG...ATTTCTCTTCCATTCTCCTGGTTTTGTAGACCCAGAAGATTGAATGAGTGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp CCCACCCTGGCTTGCCCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGCTCATCAAAACACTGTaGGTAGAGTTCCCTGCGGAC +
Preference number: 4 (lower is better)
Translates to: PTLACPELKIYVTHSIFWLIKTL*VEFPAD
Trigger: GTCCGCAGGGAACTCTACTCACAGTGTTTTGATGAG...CCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGGGCAAGCCAGGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR GCA 90 bp AATTTCAAGGACGTTAGTGTACATGGCCTGGCCTTTGAAATACAAGGAGAAAGTGGGGTGCTGGACACCTaGTGGATCCATAGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: NFKDVSVHGLAFEIQGESGVLDT*WIHSCV
Trigger: CACGCAGCTATGGATCCAGCAGGTGTCCAGCACCCC...ACTTTCTCCTTGTATTTCAAAGGCCAGGCCATGTACACTAACGTCCTTGAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR GCA 90 bp AGTGATGATGAGAAAGCAGTGGCTTTCTTAGAATTTGAGTTGGCAGTTCCCAAGCCTGTTTCCCTGGCCTaGCGCTGCTGCAGCTTTAAG +
Preference number: 4 (lower is better)
Translates to: SDDEKAVAFLEFELAVPKPVSLA*RCCSFK
Trigger: CTTAAAGCTGCAGCAGCGGCAGGCCAGGGAAACAGG...CTTGGGAACTGCCAACTCAAATTCTAAGAAAGCCACTGCTTTCTCATCATCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR GCA 90 bp ATGTCACTCATTCAATCTTCTGGGTCTACAAAACCAGGAGAATGGAAGAGAAATTGCGGACAGGGCAGATaGCTGTTTCCCTGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: MSLIQSSGSTKPGEWKRNCGQGR*LFPWPA
Trigger: GGCAGGCCAGGGAAACAGGCATCTGCCCTGTCCGCA...ATTTCTCTTCCATTCTCCTGGTTTTGTAGACCCAGAAGATTGAATGAGTGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR GCA 90 bp CCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGTCTACAAAACCAGGAGGCAGCGATGGTCATaGGGATCTCGTCCCGGACTC +
Preference number: 4 (lower is better)
Translates to: PELKIYVTHSIFWVYKTRRQRWS*GSRPGL
Trigger: GAGTCCGGGACGAGATCCGCATGACCATCGCTGCCT...CCTGGTTTTGTAGACCCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CCA 90 bp AATTTCAAGGACGTTAGTGTACATGGCCTGGCCTTTGAAATACAAGGAGAAAGTCTGCCCTGTCCAGTGTaGGCCTTGTTTGCCGTCACC +
Preference number: 4 (lower is better)
Translates to: NFKDVSVHGLAFEIQGESLPCPV*ALFAVT
Trigger: GGTGACGGCAAACAAGGCCCACACTGGACAGGGCAG...ACTTTCTCCTTGTATTTCAAAGGCCAGGCCATGTACACTAACGTCCTTGAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296218.8
CDS-3UTR CCA 90 bp GTCACCCTGTCATATAACTGTCTGACAGAAATAGGGGATGAGGTCTATAAAATGGAGTTGAGGGGAGCTTaGTCTTGGGTGGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: VTLSYNCLTEIGDEVYKMELRGA*SWVAVG
Trigger: CCCCACAGCCACCCAAGACCAAGCTCCCCTCAACTC...CATTTTATAGACCTCATCCCCTATTTCTGTCAGACAGTTATATGACAGGGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp TTGCCCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGTCTACAAAACCTGGGGTGTCGTACTTaGGCAAAGAGTCTGCGGGCG +
Preference number: 4 (lower is better)
Translates to: LPRTKDLCHSFNLLGLQNLGCRT*AKSLRA
Trigger: CGCCCGCAGACTCTTTGCTCAAGTACGACACCCCAG...GTTTTGTAGACCCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp CCCACCCTGGCTTGCCCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGTTCGCTTCAGGAACTaGATCTCCTCATTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: PTLACPELKIYVTHSIFWVRFRN*ISSLCF
Trigger: GAAGCACAATGAGGAGATTCAGTTCCTGAAGCGAAC...CCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGGGCAAGCCAGGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp CCCACCCTGGCTTGCCCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGTCACAAAGGCCACTGTaGCTAGTATTCCTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: PTLACPELKIYVTHSIFWSQRPL*LVFLSG
Trigger: GCCAGAAAGGAATACTAGTCACAGTGGCCTTTGTGA...CCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGGGCAAGCCAGGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR GCA 90 bp ATGTCACTCATTCAATCTTCTGGGTCTACAAAACCAGGAGAATGGAAGAGAAATGGGGTGCTGGACACCTaGTGGATCCATAGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: MSLIQSSGSTKPGEWKRNGVLDT*WIHSCV
Trigger: CACGCAGCTATGGATCCAGCAGGTGTCCAGCACCCC...ATTTCTCTTCCATTCTCCTGGTTTTGTAGACCCAGAAGATTGAATGAGTGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR GCA 90 bp AGTGATGATGAGAAAGCAGTGGCTTTCTTAGAATTTGAGTTGGCAGTTCCCAAGTCCCTGGCCTGCCGCTaGTGCAGCTTTAAGTCTAAC +
Preference number: 4 (lower is better)
Translates to: SDDEKAVAFLEFELAVPKSLACR*CSFKSN
Trigger: GTTAGACTTAAAGCTGCAGCAGCGGCAGGCCAGGGA...CTTGGGAACTGCCAACTCAAATTCTAAGAAAGCCACTGCTTTCTCATCATCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR GCA 90 bp CCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGTCTACAAAACCAGGCCTGTTTCCCTGGCCTaGCGCTGCTGCAGCTTTAAG +
Preference number: 4 (lower is better)
Translates to: PELKIYVTHSIFWVYKTRPVSLA*RCCSFK
Trigger: CTTAAAGCTGCAGCAGCGGCAGGCCAGGGAAACAGG...CCTGGTTTTGTAGACCCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR GCA 90 bp GTCACCCTGTCATATAACTGTCTGACAGAAATAGGGGATGAGGTCTATAAAATGTGCCAAACGCCACGCTaGTCTCGTACAGGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: VTLSYNCLTEIGDEVYKMCQTPR*SRTGSG
Trigger: ACCAGACCCTGTACGAGAGCAGCGTGGCGTTTGGCA...CATTTTATAGACCTCATCCCCTATTTCTGTCAGACAGTTATATGACAGGGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CCA 90 bp AGTTGTCTAGCAGCCGTACTCCAATTATTAGTCATTAGACCTGCATGTGAGATTCCGGCTCACCAGCACTaGGGTGTCGTACTTGAGCAA +
Preference number: 4 (lower is better)
Translates to: SCLAAVLQLLVIRPACEIPAHQH*GVVLEQ
Trigger: TTGCTCAAGTACGACACCCCAGTGCTGGTGAGCCGG...AATCTCACATGCAGGTCTAATGACTAATAATTGGAGTACGGCTGCTAGACAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CCA 90 bp GTCACCCTGTCATATAACTGTCTGACAGAAATAGGGGATGAGGTCTATAAAATGTCAGTAGCCGAGCCTTaGGGCTCCGTTTCTCCGTGT +
Preference number: 4 (lower is better)
Translates to: VTLSYNCLTEIGDEVYKMSVAEP*GSVSPC
Trigger: ACACGGAGAAACGGAGCCCCAAGGCTCGGCTACTGA...CATTTTATAGACCTCATCCCCTATTTCTGTCAGACAGTTATATGACAGGGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CCA 90 bp AGTTGTCTAGCAGCCGTACTCCAATTATTAGTCATTAGACCTGCATGTGAGATTTCAGTAGCCGAGCCTTaGGGCTCCGTTTCTCCGTGT +
Preference number: 4 (lower is better)
Translates to: SCLAAVLQLLVIRPACEISVAEP*GSVSPC
Trigger: ACACGGAGAAACGGAGCCCCAAGGCTCGGCTACTGA...AATCTCACATGCAGGTCTAATGACTAATAATTGGAGTACGGCTGCTAGACAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CCA 90 bp GTCACCCTGTCATATAACTGTCTGACAGAAATAGGGGATGAGGTCTATAAAATGGAAGGTCCAGGCTGCTaGGGGCTGACTTTCAGTAGC +
Preference number: 4 (lower is better)
Translates to: VTLSYNCLTEIGDEVYKMEGPGC*GLTFSS
Trigger: GCTACTGAAAGTCAGCCCCCAGCAGCCTGGACCTTC...CATTTTATAGACCTCATCCCCTATTTCTGTCAGACAGTTATATGACAGGGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CCA 90 bp TTGCCCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGTCTACAAAACAGATGCCTGTTTCCCTaGCCTGCCGCTGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: LPRTKDLCHSFNLLGLQNRCLFP*PAAAAA
Trigger: AGCTGCAGCAGCGGCAGGCCAGGGAAACAGGCATCT...GTTTTGTAGACCCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CCA 90 bp AATTTCAAGGACGTTAGTGTACATGGCCTGGCCTTTGAAATACAAGGAGAAAGTTCTGGTAGGCAGCGATaGTCATGCGGATCTCGTCCC +
Preference number: 4 (lower is better)
Translates to: NFKDVSVHGLAFEIQGESSGRQR*SCGSRP
Trigger: GGGACGAGATCCGCATGACCATCGCTGCCTACCAGA...ACTTTCTCCTTGTATTTCAAAGGCCAGGCCATGTACACTAACGTCCTTGAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CCA 90 bp AATTTCAAGGACGTTAGTGTACATGGCCTGGCCTTTGAAATACAAGGAGAAAGTGGCAGTTCCCAAGGCTaGCTAGTAAGCCACACACGG +
Preference number: 4 (lower is better)
Translates to: NFKDVSVHGLAFEIQGESGSSQG*LVSHTR
Trigger: CCGTGTGTGGCTTACTAGCCAGCCTTGGGAACTGCC...ACTTTCTCCTTGTATTTCAAAGGCCAGGCCATGTACACTAACGTCCTTGAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CCA 90 bp GTCACCCTGTCATATAACTGTCTGACAGAAATAGGGGATGAGGTCTATAAAATGGGCAGTTCCCAAGGCTaGCTAGTAAGCCACACACGG +
Preference number: 4 (lower is better)
Translates to: VTLSYNCLTEIGDEVYKMGSSQG*LVSHTR
Trigger: CCGTGTGTGGCTTACTAGCCAGCCTTGGGAACTGCC...CATTTTATAGACCTCATCCCCTATTTCTGTCAGACAGTTATATGACAGGGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CCA 90 bp CCCACCCTGGCTTGCCCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGGAACACAGCTTTTCTaGGGAAATGACAGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: PTLACPELKIYVTHSIFWGTQLF*GNDSAS
Trigger: GGAAGCACTGTCATTTCCCCAGAAAAGCTGTGTTCC...CCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGGGCAAGCCAGGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp AGTGATGATGAGAAAGCAGTGGCTTTCTTAGAATTTGAGTTGGCAGTTCCCAAGAGGAAGGGGTCCAGTTaGCTGGCAAGTGGGGATAAT +
Preference number: 4 (lower is better)
Translates to: SDDEKAVAFLEFELAVPKRKGSS*LASGDN
Trigger: ATTATCCCCACTTGCCAGTCAACTGGACCCCTTCCT...CTTGGGAACTGCCAACTCAAATTCTAAGAAAGCCACTGCTTTCTCATCATCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp AGTGATGATGAGAAAGCAGTGGCTTTCTTAGAATTTGAGTTGGCAGTTCCCAAGCTTGTGCAGCCTAACTaGAGGATGAAGTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SDDEKAVAFLEFELAVPKLVQPN*RMKSSS
Trigger: GCTGGAGGACTTCATCCTTCAGTTAGGCTGCACAAG...CTTGGGAACTGCCAACTCAAATTCTAAGAAAGCCACTGCTTTCTCATCATCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp GTCACCCTGTCATATAACTGTCTGACAGAAATAGGGGATGAGGTCTATAAAATGAGCCTTGAAGCTCACTaGACCCAAGACGGATGGCAG +
Preference number: 4 (lower is better)
Translates to: VTLSYNCLTEIGDEVYKMSLEAH*TQDGWQ
Trigger: CTGCCATCCGTCTTGGGTTCAGTGAGCTTCAAGGCT...CATTTTATAGACCTCATCCCCTATTTCTGTCAGACAGTTATATGACAGGGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp CCCACCCTGGCTTGCCCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGTCTTTCCCATGGAAATaGCAACACAGGCAGGTCATT +
Preference number: 4 (lower is better)
Translates to: PTLACPELKIYVTHSIFWSFPWK*QHRQVI
Trigger: AATGACCTGCCTGTGTTGTCATTTCCATGGGAAAGA...CCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGGGCAAGCCAGGGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR GCA 90 bp AATTTCAAGGACGTTAGTGTACATGGCCTGGCCTTTGAAATACAAGGAGAAAGTAGTGTGGGCCTTGTTTaGCGTCACCATGGAAACCGC +
Preference number: 4 (lower is better)
Translates to: NFKDVSVHGLAFEIQGESSVGLV*RHHGNR
Trigger: GCGGTTTCCATGGTGACGGCAAACAAGGCCCACACT...ACTTTCTCCTTGTATTTCAAAGGCCAGGCCATGTACACTAACGTCCTTGAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296218.8
CDS-3UTR GCA 90 bp AGTTGTCTAGCAGCCGTACTCCAATTATTAGTCATTAGACCTGCATGTGAGATTCTTGAGCAAAGAGTCTaGGGGCGGAATCATGGCGGA +
Preference number: 4 (lower is better)
Translates to: SCLAAVLQLLVIRPACEILEQRV*GRNHGG
Trigger: TCCGCCATGATTCCGCCCGCAGACTCTTTGCTCAAG...AATCTCACATGCAGGTCTAATGACTAATAATTGGAGTACGGCTGCTAGACAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR GCA 90 bp CCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGTCTACAAAACCAGGTGCTGGATCCATAGCTaGGTGTCTTCCACCCACTCC +
Preference number: 4 (lower is better)
Translates to: PELKIYVTHSIFWVYKTRCWIHS*VSSTHS
Trigger: GGAGTGGGTGGAAGACACGCAGCTATGGATCCAGCA...CCTGGTTTTGTAGACCCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR GCA 90 bp AGTTGTCTAGCAGCCGTACTCCAATTATTAGTCATTAGACCTGCATGTGAGATTTGCTGGATCCATAGCTaGGTGTCTTCCACCCACTCC +
Preference number: 4 (lower is better)
Translates to: SCLAAVLQLLVIRPACEICWIHS*VSSTHS
Trigger: GGAGTGGGTGGAAGACACGCAGCTATGGATCCAGCA...AATCTCACATGCAGGTCTAATGACTAATAATTGGAGTACGGCTGCTAGACAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR GCA 90 bp TTGCCCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGTCTACAAAACGCAGTGCCTTCCTCATaGCAAACGCCACGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LPRTKDLCHSFNLLGLQNAVPSS*QTPRCS
Trigger: AGAGCAGCGTGGCGTTTGGCATGAGGAAGGCACTGC...GTTTTGTAGACCCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR GCA 90 bp ATGTCACTCATTCAATCTTCTGGGTCTACAAAACCAGGAGAATGGAAGAGAAATCTGCTCAGCCTGCAGTaGCTTCCTCATGCCAAACGC +
Preference number: 4 (lower is better)
Translates to: MSLIQSSGSTKPGEWKRNLLSLQ*LPHAKR
Trigger: GCGTTTGGCATGAGGAAGGCACTGCAGGCTGAGCAG...ATTTCTCTTCCATTCTCCTGGTTTTGTAGACCCAGAAGATTGAATGAGTGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR GCA 90 bp AGTTGTCTAGCAGCCGTACTCCAATTATTAGTCATTAGACCTGCATGTGAGATTATGTCTGACTTCCCCTaGTCAGCCTGCAGTGCCTTC +
Preference number: 4 (lower is better)
Translates to: SCLAAVLQLLVIRPACEIMSDFP*SACSAF
Trigger: GAAGGCACTGCAGGCTGAGCAGGGGAAGTCAGACAT...AATCTCACATGCAGGTCTAATGACTAATAATTGGAGTACGGCTGCTAGACAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR GCA 90 bp AATTTCAAGGACGTTAGTGTACATGGCCTGGCCTTTGAAATACAAGGAGAAAGTATGTCTGACTTCCCCTaGTCAGCCTGCAGTGCCTTC +
Preference number: 4 (lower is better)
Translates to: NFKDVSVHGLAFEIQGESMSDFP*SACSAF
Trigger: GAAGGCACTGCAGGCTGAGCAGGGGAAGTCAGACAT...ACTTTCTCCTTGTATTTCAAAGGCCAGGCCATGTACACTAACGTCCTTGAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR GCA 90 bp ATGTCACTCATTCAATCTTCTGGGTCTACAAAACCAGGAGAATGGAAGAGAAATCACACCATCTTCCATTaGCCAGCCAGGAGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: MSLIQSSGSTKPGEWKRNHTIFH*PARSLA
Trigger: AGCCAGGCTCCTGGCTGGGCAATGGAAGATGGTGTG...ATTTCTCTTCCATTCTCCTGGTTTTGTAGACCCAGAAGATTGAATGAGTGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CCA 90 bp ATGTCACTCATTCAATCTTCTGGGTCTACAAAACCAGGAGAATGGAAGAGAAATGAAGGTCCAGGCTGCTaGGGGCTGACTTTCAGTAGC +
Preference number: 4 (lower is better)
Translates to: MSLIQSSGSTKPGEWKRNEGPGC*GLTFSS
Trigger: GCTACTGAAAGTCAGCCCCCAGCAGCCTGGACCTTC...ATTTCTCTTCCATTCTCCTGGTTTTGTAGACCCAGAAGATTGAATGAGTGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CCA 90 bp GTCACCCTGTCATATAACTGTCTGACAGAAATAGGGGATGAGGTCTATAAAATGGTGCTGGACACCTGCTaGATCCATAGCTGCGTGTCT +
Preference number: 4 (lower is better)
Translates to: VTLSYNCLTEIGDEVYKMVLDTC*IHSCVS
Trigger: AGACACGCAGCTATGGATCCAGCAGGTGTCCAGCAC...CATTTTATAGACCTCATCCCCTATTTCTGTCAGACAGTTATATGACAGGGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp TTGCCCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGTCTACAAAACTTTCCTCTCCATGTCTaGCTTCCCCTGCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: LPRTKDLCHSFNLLGLQNFPLHV*LPLLSL
Trigger: CAGGCTGAGCAGGGGAAGTCAGACATGGAGAGGAAA...GTTTTGTAGACCCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp GTCACCCTGTCATATAACTGTCTGACAGAAATAGGGGATGAGGTCTATAAAATGAGGAAGGGGTCCAGTTaGCTGGCAAGTGGGGATAAT +
Preference number: 4 (lower is better)
Translates to: VTLSYNCLTEIGDEVYKMRKGSS*LASGDN
Trigger: ATTATCCCCACTTGCCAGTCAACTGGACCCCTTCCT...CATTTTATAGACCTCATCCCCTATTTCTGTCAGACAGTTATATGACAGGGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp AGTGATGATGAGAAAGCAGTGGCTTTCTTAGAATTTGAGTTGGCAGTTCCCAAGAGCCTAACTGAAGGATaGAGTCCTCCAGCTTACCAC +
Preference number: 4 (lower is better)
Translates to: SDDEKAVAFLEFELAVPKSLTEG*SPPAYH
Trigger: GTGGTAAGCTGGAGGACTTCATCCTTCAGTTAGGCT...CTTGGGAACTGCCAACTCAAATTCTAAGAAAGCCACTGCTTTCTCATCATCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp CCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGTCTACAAAACCAGGCTTGTGCAGCCTAACTaGAGGATGAAGTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PELKIYVTHSIFWVYKTRLVQPN*RMKSSS
Trigger: GCTGGAGGACTTCATCCTTCAGTTAGGCTGCACAAG...CCTGGTTTTGTAGACCCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR GCA 90 bp TTGCCCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGTCTACAAAACCTTGAGCAAAGAGTCTaGGGGCGGAATCATGGCGGA +
Preference number: 4 (lower is better)
Translates to: LPRTKDLCHSFNLLGLQNLEQRV*GRNHGG
Trigger: TCCGCCATGATTCCGCCCGCAGACTCTTTGCTCAAG...GTTTTGTAGACCCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR GCA 90 bp ATGTCACTCATTCAATCTTCTGGGTCTACAAAACCAGGAGAATGGAAGAGAAATCTGGCCTGCCGCTGCTaGAGCTTTAAGTCTAACTGC +
Preference number: 4 (lower is better)
Translates to: MSLIQSSGSTKPGEWKRNLACRC*SFKSNC
Trigger: GCAGTTAGACTTAAAGCTGCAGCAGCGGCAGGCCAG...ATTTCTCTTCCATTCTCCTGGTTTTGTAGACCCAGAAGATTGAATGAGTGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR GCA 90 bp TTGCCCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGTCTACAAAACTCCCTGGCCTGCCGCTaGTGCAGCTTTAAGTCTAAC +
Preference number: 4 (lower is better)
Translates to: LPRTKDLCHSFNLLGLQNSLACR*CSFKSN
Trigger: GTTAGACTTAAAGCTGCAGCAGCGGCAGGCCAGGGA...GTTTTGTAGACCCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR GCA 90 bp AATTTCAAGGACGTTAGTGTACATGGCCTGGCCTTTGAAATACAAGGAGAAAGTGGGGAAGAGCTGAGTTaGAGACAACTCACAAAGGCC +
Preference number: 4 (lower is better)
Translates to: NFKDVSVHGLAFEIQGESGEELS*RQLTKA
Trigger: GGCCTTTGTGAGTTGTCTGCAACTCAGCTCTTCCCC...ACTTTCTCCTTGTATTTCAAAGGCCAGGCCATGTACACTAACGTCCTTGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CCA 90 bp CCCACCCTGGCTTGCCCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGTTAGTGTACATGGCCTaGCCTTTGAAATACAAGGAG +
Preference number: 4 (lower is better)
Translates to: PTLACPELKIYVTHSIFWLVYMA*PLKYKE
Trigger: CTCCTTGTATTTCAAAGGCCAGGCCATGTACACTAA...CCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGGGCAAGCCAGGGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp GTCACCCTGTCATATAACTGTCTGACAGAAATAGGGGATGAGGTCTATAAAATGAGCCTAACTGAAGGATaGAGTCCTCCAGCTTACCAC +
Preference number: 4 (lower is better)
Translates to: VTLSYNCLTEIGDEVYKMSLTEG*SPPAYH
Trigger: GTGGTAAGCTGGAGGACTTCATCCTTCAGTTAGGCT...CATTTTATAGACCTCATCCCCTATTTCTGTCAGACAGTTATATGACAGGGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp AGTGATGATGAGAAAGCAGTGGCTTTCTTAGAATTTGAGTTGGCAGTTCCCAAGTTCCATTGTGAGCCTTaGAGCTCACTGAACCCAAGA +
Preference number: 4 (lower is better)
Translates to: SDDEKAVAFLEFELAVPKFHCEP*SSLNPR
Trigger: TCTTGGGTTCAGTGAGCTTCAAGGCTCACAATGGAA...CTTGGGAACTGCCAACTCAAATTCTAAGAAAGCCACTGCTTTCTCATCATCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp AGTGATGATGAGAAAGCAGTGGCTTTCTTAGAATTTGAGTTGGCAGTTCCCAAGGCTTTTCTGGGGAAATaGCAGTGCTTCCATTGTGAG +
Preference number: 4 (lower is better)
Translates to: SDDEKAVAFLEFELAVPKAFLGK*QCFHCE
Trigger: CTCACAATGGAAGCACTGTCATTTCCCCAGAAAAGC...CTTGGGAACTGCCAACTCAAATTCTAAGAAAGCCACTGCTTTCTCATCATCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp AATTTCAAGGACGTTAGTGTACATGGCCTGGCCTTTGAAATACAAGGAGAAAGTGCCTCATTGAGTCTGTaGAGTAGACCCACTTATGGC +
Preference number: 4 (lower is better)
Translates to: NFKDVSVHGLAFEIQGESASLSL*SRPTYG
Trigger: GCCATAAGTGGGTCTACTTCACAGACTCAATGAGGC...ACTTTCTCCTTGTATTTCAAAGGCCAGGCCATGTACACTAACGTCCTTGAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp GTCACCCTGTCATATAACTGTCTGACAGAAATAGGGGATGAGGTCTATAAAATGGCCTCATTGAGTCTGTaGAGTAGACCCACTTATGGC +
Preference number: 4 (lower is better)
Translates to: VTLSYNCLTEIGDEVYKMASLSL*SRPTYG
Trigger: GCCATAAGTGGGTCTACTTCACAGACTCAATGAGGC...CATTTTATAGACCTCATCCCCTATTTCTGTCAGACAGTTATATGACAGGGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR GCA 90 bp ATTCAATCTTCTGGGTCTACAAAACCAGGAGAATGGAAGAGAAATACTAAAATGCTGCTCAGCCTGCAGTaGCTTCCTCATGCCAAACGC +
Preference number: 4 (lower is better)
Translates to: IQSSGSTKPGEWKRNTKMLLSLQ*LPHAKR
Trigger: GCGTTTGGCATGAGGAAGGCACTGCAGGCTGAGCAG...CATTTTAGTATTTCTCTTCCATTCTCCTGGTTTTGTAGACCCAGAAGATTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR GCA 90 bp AGTGATGATGAGAAAGCAGTGGCTTTCTTAGAATTTGAGTTGGCAGTTCCCAAGTCACATTTTGCCTTCTaGTCGTTCACTTGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: SDDEKAVAFLEFELAVPKSHFAF*SFTCLS
Trigger: GGAGAGGCAAGTGAACGAGCAGAAGGCAAAATGTGA...CTTGGGAACTGCCAACTCAAATTCTAAGAAAGCCACTGCTTTCTCATCATCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CCA 90 bp ATTCAATCTTCTGGGTCTACAAAACCAGGAGAATGGAAGAGAAATACTAAAATGCCGGCTCACCAGCACTaGGGTGTCGTACTTGAGCAA +
Preference number: 4 (lower is better)
Translates to: IQSSGSTKPGEWKRNTKMPAHQH*GVVLEQ
Trigger: TTGCTCAAGTACGACACCCCAGTGCTGGTGAGCCGG...CATTTTAGTATTTCTCTTCCATTCTCCTGGTTTTGTAGACCCAGAAGATTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CCA 90 bp ATTCAATCTTCTGGGTCTACAAAACCAGGAGAATGGAAGAGAAATACTAAAATGTCTGGTAGGCAGCGATaGTCATGCGGATCTCGTCCC +
Preference number: 4 (lower is better)
Translates to: IQSSGSTKPGEWKRNTKMSGRQR*SCGSRP
Trigger: GGGACGAGATCCGCATGACCATCGCTGCCTACCAGA...CATTTTAGTATTTCTCTTCCATTCTCCTGGTTTTGTAGACCCAGAAGATTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CCA 90 bp AGTGATGATGAGAAAGCAGTGGCTTTCTTAGAATTTGAGTTGGCAGTTCCCAAGTCTCCCGCTTCTCAGTaGCTTCACATTTTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: SDDEKAVAFLEFELAVPKSPASQ*LHILPS
Trigger: AGAAGGCAAAATGTGAAGCCACTGAGAAGCGGGAGA...CTTGGGAACTGCCAACTCAAATTCTAAGAAAGCCACTGCTTTCTCATCATCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CCA 90 bp AGTGATGATGAGAAAGCAGTGGCTTTCTTAGAATTTGAGTTGGCAGTTCCCAAGAGGGGTCCAGTTGACTaGCAAGTGGGGATAATACAT +
Preference number: 4 (lower is better)
Translates to: SDDEKAVAFLEFELAVPKRGPVD*QVGIIH
Trigger: ATGTATTATCCCCACTTGCCAGTCAACTGGACCCCT...CTTGGGAACTGCCAACTCAAATTCTAAGAAAGCCACTGCTTTCTCATCATCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp ATTCAATCTTCTGGGTCTACAAAACCAGGAGAATGGAAGAGAAATACTAAAATGTTTCCTCTCCATGTCTaGCTTCCCCTGCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: IQSSGSTKPGEWKRNTKMFPLHV*LPLLSL
Trigger: CAGGCTGAGCAGGGGAAGTCAGACATGGAGAGGAAA...CATTTTAGTATTTCTCTTCCATTCTCCTGGTTTTGTAGACCCAGAAGATTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp AATTTCAAGGACGTTAGTGTACATGGCCTGGCCTTTGAAATACAAGGAGAAAGTGGCTTTCTTAGAATTTaGGTTGGCAGTTCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: NFKDVSVHGLAFEIQGESGFLRI*VGSSQG
Trigger: GCCTTGGGAACTGCCAACTCAAATTCTAAGAAAGCC...ACTTTCTCCTTGTATTTCAAAGGCCAGGCCATGTACACTAACGTCCTTGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp AGTGATGATGAGAAAGCAGTGGCTTTCTTAGAATTTGAGTTGGCAGTTCCCAAGCAGGTAGACTTTGGATaGACTAAGAGGTTCCACAGT +
Preference number: 4 (lower is better)
Translates to: SDDEKAVAFLEFELAVPKQVDFG*TKRFHS
Trigger: ACTGTGGAACCTCTTAGTTCATCCAAAGTCTACCTG...CTTGGGAACTGCCAACTCAAATTCTAAGAAAGCCACTGCTTTCTCATCATCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp TTGCCCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGTCTACAAAACCTGAGGTTTGACAGTTaGAGCCCTTCACCAGTGCTA +
Preference number: 4 (lower is better)
Translates to: LPRTKDLCHSFNLLGLQNLRFDS*SPSPVL
Trigger: TAGCACTGGTGAAGGGCTTCAACTGTCAAACCTCAG...GTTTTGTAGACCCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp AGTGATGATGAGAAAGCAGTGGCTTTCTTAGAATTTGAGTTGGCAGTTCCCAAGATTTGTTCTGAGGTTTaGCAGTTGAAGCCCTTCACC +
Preference number: 4 (lower is better)
Translates to: SDDEKAVAFLEFELAVPKICSEV*QLKPFT
Trigger: GGTGAAGGGCTTCAACTGTCAAACCTCAGAACAAAT...CTTGGGAACTGCCAACTCAAATTCTAAGAAAGCCACTGCTTTCTCATCATCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR GCA 90 bp TTGCCCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGTCTACAAAACAGCTTTAAGTCTAACTaGTCCTGGAGGTGCACCACG +
Preference number: 4 (lower is better)
Translates to: LPRTKDLCHSFNLLGLQNSFKSN*SWRCTT
Trigger: CGTGGTGCACCTCCAGGAGCAGTTAGACTTAAAGCT...GTTTTGTAGACCCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR GCA 90 bp ATTCAATCTTCTGGGTCTACAAAACCAGGAGAATGGAAGAGAAATACTAAAATGCTGGCCTGCCGCTGCTaGAGCTTTAAGTCTAACTGC +
Preference number: 4 (lower is better)
Translates to: IQSSGSTKPGEWKRNTKMLACRC*SFKSNC
Trigger: GCAGTTAGACTTAAAGCTGCAGCAGCGGCAGGCCAG...CATTTTAGTATTTCTCTTCCATTCTCCTGGTTTTGTAGACCCAGAAGATTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR GCA 90 bp GTCACCCTGTCATATAACTGTCTGACAGAAATAGGGGATGAGGTCTATAAAATGTTCTGCTCGTTCACTTaGCTCTCCAGGTCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: VTLSYNCLTEIGDEVYKMFCSFT*LSRSLF
Trigger: AAAGAGAGACCTGGAGAGGCAAGTGAACGAGCAGAA...CATTTTATAGACCTCATCCCCTATTTCTGTCAGACAGTTATATGACAGGGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR GCA 90 bp AGTGATGATGAGAAAGCAGTGGCTTTCTTAGAATTTGAGTTGGCAGTTCCCAAGCAGGGCTTGATTTTCTaGAGGATAAGGGGAACAGAT +
Preference number: 4 (lower is better)
Translates to: SDDEKAVAFLEFELAVPKQGLIF*RIRGTD
Trigger: ATCTGTTCCCCTTATCCTGCAGAAAATCAAGCCCTG...CTTGGGAACTGCCAACTCAAATTCTAAGAAAGCCACTGCTTTCTCATCATCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CCA 90 bp AATTTCAAGGACGTTAGTGTACATGGCCTGGCCTTTGAAATACAAGGAGAAAGTTCTCCCGCTTCTCAGTaGCTTCACATTTTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: NFKDVSVHGLAFEIQGESSPASQ*LHILPS
Trigger: AGAAGGCAAAATGTGAAGCCACTGAGAAGCGGGAGA...ACTTTCTCCTTGTATTTCAAAGGCCAGGCCATGTACACTAACGTCCTTGAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CCA 90 bp AGTTGTCTAGCAGCCGTACTCCAATTATTAGTCATTAGACCTGCATGTGAGATTGGAACACAGCTTTTCTaGGGAAATGACAGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: SCLAAVLQLLVIRPACEIGTQLF*GNDSAS
Trigger: GGAAGCACTGTCATTTCCCCAGAAAAGCTGTGTTCC...AATCTCACATGCAGGTCTAATGACTAATAATTGGAGTACGGCTGCTAGACAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CCA 90 bp AGTGATGATGAGAAAGCAGTGGCTTTCTTAGAATTTGAGTTGGCAGTTCCCAAGGGCAGGTCATTTGAGTaGAGGCTTAAAATTCCTCAG +
Preference number: 4 (lower is better)
Translates to: SDDEKAVAFLEFELAVPKGRSFE*RLKIPQ
Trigger: CTGAGGAATTTTAAGCCTCCACTCAAATGACCTGCC...CTTGGGAACTGCCAACTCAAATTCTAAGAAAGCCACTGCTTTCTCATCATCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp CCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGTCTACAAAACCAGGCCAAAGCCATGGGTTTaGCTGCCATTGTTTCCTAAT +
Preference number: 4 (lower is better)
Translates to: PELKIYVTHSIFWVYKTRPKPWV*LPLFPN
Trigger: ATTAGGAAACAATGGCAGTCAAACCCATGGCTTTGG...CCTGGTTTTGTAGACCCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp GTCACCCTGTCATATAACTGTCTGACAGAAATAGGGGATGAGGTCTATAAAATGCCAAAGCCATGGGTTTaGCTGCCATTGTTTCCTAAT +
Preference number: 4 (lower is better)
Translates to: VTLSYNCLTEIGDEVYKMPKPWV*LPLFPN
Trigger: ATTAGGAAACAATGGCAGTCAAACCCATGGCTTTGG...CATTTTATAGACCTCATCCCCTATTTCTGTCAGACAGTTATATGACAGGGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp ATGTCACTCATTCAATCTTCTGGGTCTACAAAACCAGGAGAATGGAAGAGAAATTCACAAAGGCCACTGTaGCTAGTATTCCTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: MSLIQSSGSTKPGEWKRNSQRPL*LVFLSG
Trigger: GCCAGAAAGGAATACTAGTCACAGTGGCCTTTGTGA...ATTTCTCTTCCATTCTCCTGGTTTTGTAGACCCAGAAGATTGAATGAGTGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp ATTCAATCTTCTGGGTCTACAAAACCAGGAGAATGGAAGAGAAATACTAAAATGTGCTGGGGGAAGAGCTaGGTTGCAGACAACTCACAA +
Preference number: 4 (lower is better)
Translates to: IQSSGSTKPGEWKRNTKMCWGKS*VADNSQ
Trigger: TTGTGAGTTGTCTGCAACTCAGCTCTTCCCCCAGCA...CATTTTAGTATTTCTCTTCCATTCTCCTGGTTTTGTAGACCCAGAAGATTGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp ATGTCACTCATTCAATCTTCTGGGTCTACAAAACCAGGAGAATGGAAGAGAAATTTCCATTGTGAGCCTTaGAGCTCACTGAACCCAAGA +
Preference number: 4 (lower is better)
Translates to: MSLIQSSGSTKPGEWKRNFHCEP*SSLNPR
Trigger: TCTTGGGTTCAGTGAGCTTCAAGGCTCACAATGGAA...ATTTCTCTTCCATTCTCCTGGTTTTGTAGACCCAGAAGATTGAATGAGTGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp GTCACCCTGTCATATAACTGTCTGACAGAAATAGGGGATGAGGTCTATAAAATGTCTTTCCCATGGAAATaGCAACACAGGCAGGTCATT +
Preference number: 4 (lower is better)
Translates to: VTLSYNCLTEIGDEVYKMSFPWK*QHRQVI
Trigger: AATGACCTGCCTGTGTTGTCATTTCCATGGGAAAGA...CATTTTATAGACCTCATCCCCTATTTCTGTCAGACAGTTATATGACAGGGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp AGTTGTCTAGCAGCCGTACTCCAATTATTAGTCATTAGACCTGCATGTGAGATTACATGGCCTGGCCTTTaGAATACAAGGAGAAAGTTG +
Preference number: 4 (lower is better)
Translates to: SCLAAVLQLLVIRPACEITWPGL*NTRRKL
Trigger: CAACTTTCTCCTTGTATTTCAAAGGCCAGGCCATGT...AATCTCACATGCAGGTCTAATGACTAATAATTGGAGTACGGCTGCTAGACAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp AATTTCAAGGACGTTAGTGTACATGGCCTGGCCTTTGAAATACAAGGAGAAAGTCAGGTAGACTTTGGATaGACTAAGAGGTTCCACAGT +
Preference number: 4 (lower is better)
Translates to: NFKDVSVHGLAFEIQGESQVDFG*TKRFHS
Trigger: ACTGTGGAACCTCTTAGTTCATCCAAAGTCTACCTG...ACTTTCTCCTTGTATTTCAAAGGCCAGGCCATGTACACTAACGTCCTTGAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp AATTTCAAGGACGTTAGTGTACATGGCCTGGCCTTTGAAATACAAGGAGAAAGTATTTGTTCTGAGGTTTaGCAGTTGAAGCCCTTCACC +
Preference number: 4 (lower is better)
Translates to: NFKDVSVHGLAFEIQGESICSEV*QLKPFT
Trigger: GGTGAAGGGCTTCAACTGTCAAACCTCAGAACAAAT...ACTTTCTCCTTGTATTTCAAAGGCCAGGCCATGTACACTAACGTCCTTGAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR GCA 90 bp TTGCCCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGTCTACAAAACTCACATTTTGCCTTCTaGTCGTTCACTTGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: LPRTKDLCHSFNLLGLQNSHFAF*SFTCLS
Trigger: GGAGAGGCAAGTGAACGAGCAGAAGGCAAAATGTGA...GTTTTGTAGACCCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CCA 90 bp ATGTCACTCATTCAATCTTCTGGGTCTACAAAACCAGGAGAATGGAAGAGAAATAGGGGTCCAGTTGACTaGCAAGTGGGGATAATACAT +
Preference number: 4 (lower is better)
Translates to: MSLIQSSGSTKPGEWKRNRGPVD*QVGIIH
Trigger: ATGTATTATCCCCACTTGCCAGTCAACTGGACCCCT...ATTTCTCTTCCATTCTCCTGGTTTTGTAGACCCAGAAGATTGAATGAGTGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CCA 90 bp AGTGATGATGAGAAAGCAGTGGCTTTCTTAGAATTTGAGTTGGCAGTTCCCAAGAATTCCTCAGGATACTaGATCAGGGTAAAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SDDEKAVAFLEFELAVPKNSSGY*IRVKAA
Trigger: AGCAGCTTTTACCCTGATCCAGTATCCTGAGGAATT...CTTGGGAACTGCCAACTCAAATTCTAAGAAAGCCACTGCTTTCTCATCATCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CCA 90 bp AATTTCAAGGACGTTAGTGTACATGGCCTGGCCTTTGAAATACAAGGAGAAAGTGGCAGGTCATTTGAGTaGAGGCTTAAAATTCCTCAG +
Preference number: 4 (lower is better)
Translates to: NFKDVSVHGLAFEIQGESGRSFE*RLKIPQ
Trigger: CTGAGGAATTTTAAGCCTCCACTCAAATGACCTGCC...ACTTTCTCCTTGTATTTCAAAGGCCAGGCCATGTACACTAACGTCCTTGAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp GTCACCCTGTCATATAACTGTCTGACAGAAATAGGGGATGAGGTCTATAAAATGTCAGTGATAAGAGTCTaGAAGTCTAGCACTTCAGGT +
Preference number: 4 (lower is better)
Translates to: VTLSYNCLTEIGDEVYKMSVIRV*KSSTSG
Trigger: ACCTGAAGTGCTAGACTTTCAGACTCTTATCACTGA...CATTTTATAGACCTCATCCCCTATTTCTGTCAGACAGTTATATGACAGGGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp CCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGTCTACAAAACCAGGCTAATGCATTTGTTCTaGGGTTTGACAGTTGAAGCC +
Preference number: 4 (lower is better)
Translates to: PELKIYVTHSIFWVYKTRLMHLF*GLTVEA
Trigger: GGCTTCAACTGTCAAACCTCAGAACAAATGCATTAG...CCTGGTTTTGTAGACCCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR GCA 90 bp AGTTGTCTAGCAGCCGTACTCCAATTATTAGTCATTAGACCTGCATGTGAGATTAAGATTTCTTCTGCCTaGTTTGTAGGATCTGGGACA +
Preference number: 4 (lower is better)
Translates to: SCLAAVLQLLVIRPACEIKISSA*FVGSGT
Trigger: TGTCCCAGATCCTACAAAGCAGGCAGAAGAAATCTT...AATCTCACATGCAGGTCTAATGACTAATAATTGGAGTACGGCTGCTAGACAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR GCA 90 bp AATTTCAAGGACGTTAGTGTACATGGCCTGGCCTTTGAAATACAAGGAGAAAGTAAGATTTCTTCTGCCTaGTTTGTAGGATCTGGGACA +
Preference number: 4 (lower is better)
Translates to: NFKDVSVHGLAFEIQGESKISSA*FVGSGT
Trigger: TGTCCCAGATCCTACAAAGCAGGCAGAAGAAATCTT...ACTTTCTCCTTGTATTTCAAAGGCCAGGCCATGTACACTAACGTCCTTGAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR GCA 90 bp AGTGATGATGAGAAAGCAGTGGCTTTCTTAGAATTTGAGTTGGCAGTTCCCAAGATTCAAGATTTCTTCTaGCTGCTTTGTAGGATCTGG +
Preference number: 4 (lower is better)
Translates to: SDDEKAVAFLEFELAVPKIQDFF*LLCRIW
Trigger: CCAGATCCTACAAAGCAGGCAGAAGAAATCTTGAAT...CTTGGGAACTGCCAACTCAAATTCTAAGAAAGCCACTGCTTTCTCATCATCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR GCA 90 bp ATGTCACTCATTCAATCTTCTGGGTCTACAAAACCAGGAGAATGGAAGAGAAATCAGGGCTTGATTTTCTaGAGGATAAGGGGAACAGAT +
Preference number: 4 (lower is better)
Translates to: MSLIQSSGSTKPGEWKRNQGLIF*RIRGTD
Trigger: ATCTGTTCCCCTTATCCTGCAGAAAATCAAGCCCTG...ATTTCTCTTCCATTCTCCTGGTTTTGTAGACCCAGAAGATTGAATGAGTGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CCA 90 bp AGTTGTCTAGCAGCCGTACTCCAATTATTAGTCATTAGACCTGCATGTGAGATTAATTCCTCAGGATACTaGATCAGGGTAAAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SCLAAVLQLLVIRPACEINSSGY*IRVKAA
Trigger: AGCAGCTTTTACCCTGATCCAGTATCCTGAGGAATT...AATCTCACATGCAGGTCTAATGACTAATAATTGGAGTACGGCTGCTAGACAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp ATTCAATCTTCTGGGTCTACAAAACCAGGAGAATGGAAGAGAAATACTAAAATGGTTCGCTTCAGGAACTaGATCTCCTCATTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: IQSSGSTKPGEWKRNTKMVRFRN*ISSLCF
Trigger: GAAGCACAATGAGGAGATTCAGTTCCTGAAGCGAAC...CATTTTAGTATTTCTCTTCCATTCTCCTGGTTTTGTAGACCCAGAAGATTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp ATTCAATCTTCTGGGTCTACAAAACCAGGAGAATGGAAGAGAAATACTAAAATGGGCTTTCTTAGAATTTaGGTTGGCAGTTCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: IQSSGSTKPGEWKRNTKMGFLRI*VGSSQG
Trigger: GCCTTGGGAACTGCCAACTCAAATTCTAAGAAAGCC...CATTTTAGTATTTCTCTTCCATTCTCCTGGTTTTGTAGACCCAGAAGATTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp AATTTCAAGGACGTTAGTGTACATGGCCTGGCCTTTGAAATACAAGGAGAAAGTACCAAAGCTCCAAAGTaGGTTAGAAATGCATTAGAG +
Preference number: 4 (lower is better)
Translates to: NFKDVSVHGLAFEIQGESTKAPK*VRNALE
Trigger: CTCTAATGCATTTCTAACTCACTTTGGAGCTTTGGT...ACTTTCTCCTTGTATTTCAAAGGCCAGGCCATGTACACTAACGTCCTTGAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp ATTCAATCTTCTGGGTCTACAAAACCAGGAGAATGGAAGAGAAATACTAAAATGGCTTTTCTGGGGAAATaGCAGTGCTTCCATTGTGAG +
Preference number: 4 (lower is better)
Translates to: IQSSGSTKPGEWKRNTKMAFLGK*QCFHCE
Trigger: CTCACAATGGAAGCACTGTCATTTCCCCAGAAAAGC...CATTTTAGTATTTCTCTTCCATTCTCCTGGTTTTGTAGACCCAGAAGATTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp AGTTGTCTAGCAGCCGTACTCCAATTATTAGTCATTAGACCTGCATGTGAGATTTCCTTAGATTCCAGATaGGAATGTGTATGGTGTGTT +
Preference number: 4 (lower is better)
Translates to: SCLAAVLQLLVIRPACEISLDSR*ECVWCV
Trigger: AACACACCATACACATTCTCATCTGGAATCTAAGGA...AATCTCACATGCAGGTCTAATGACTAATAATTGGAGTACGGCTGCTAGACAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp ATGTCACTCATTCAATCTTCTGGGTCTACAAAACCAGGAGAATGGAAGAGAAATTCAGTGATAAGAGTCTaGAAGTCTAGCACTTCAGGT +
Preference number: 4 (lower is better)
Translates to: MSLIQSSGSTKPGEWKRNSVIRV*KSSTSG
Trigger: ACCTGAAGTGCTAGACTTTCAGACTCTTATCACTGA...ATTTCTCTTCCATTCTCCTGGTTTTGTAGACCCAGAAGATTGAATGAGTGACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp TTGCCCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGTCTACAAAACCTAATGCATTTGTTCTaGGGTTTGACAGTTGAAGCC +
Preference number: 4 (lower is better)
Translates to: LPRTKDLCHSFNLLGLQNLMHLF*GLTVEA
Trigger: GGCTTCAACTGTCAAACCTCAGAACAAATGCATTAG...GTTTTGTAGACCCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGGGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR GCA 90 bp AGTGATGATGAGAAAGCAGTGGCTTTCTTAGAATTTGAGTTGGCAGTTCCCAAGTTATCACTTCTTTGGTaGAATAATGCCTTCCAGTTG +
Preference number: 4 (lower is better)
Translates to: SDDEKAVAFLEFELAVPKLSLLW*NNAFQL
Trigger: CAACTGGAAGGCATTATTGCACCAAAGAAGTGATAA...CTTGGGAACTGCCAACTCAAATTCTAAGAAAGCCACTGCTTTCTCATCATCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp ATGTCACTCATTCAATCTTCTGGGTCTACAAAACCAGGAGAATGGAAGAGAAATGTAGAAGATGAATTGTaGACTAAAAGTTTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: MSLIQSSGSTKPGEWKRNVEDEL*TKSLRG
Trigger: GCCCCTCAAACTTTTAGTTCACAATTCATCTTCTAC...ATTTCTCTTCCATTCTCCTGGTTTTGTAGACCCAGAAGATTGAATGAGTGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp TTGCCCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGTCTACAAAACGTAGAAGATGAATTGTaGACTAAAAGTTTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: LPRTKDLCHSFNLLGLQNVEDEL*TKSLRG
Trigger: GCCCCTCAAACTTTTAGTTCACAATTCATCTTCTAC...GTTTTGTAGACCCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGGGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR GCA 90 bp AGTTGTCTAGCAGCCGTACTCCAATTATTAGTCATTAGACCTGCATGTGAGATTTTATCACTTCTTTGGTaGAATAATGCCTTCCAGTTG +
Preference number: 4 (lower is better)
Translates to: SCLAAVLQLLVIRPACEILSLLW*NNAFQL
Trigger: CAACTGGAAGGCATTATTGCACCAAAGAAGTGATAA...AATCTCACATGCAGGTCTAATGACTAATAATTGGAGTACGGCTGCTAGACAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR GCA 90 bp AGTTGTCTAGCAGCCGTACTCCAATTATTAGTCATTAGACCTGCATGTGAGATTAGAGAAATACTAAAATaGAGTTGTCTAGCAGCCGTA +
Preference number: 4 (lower is better)
Translates to: SCLAAVLQLLVIRPACEIREILK*SCLAAV
Trigger: TACGGCTGCTAGACAACTGCATTTTAGTATTTCTCT...AATCTCACATGCAGGTCTAATGACTAATAATTGGAGTACGGCTGCTAGACAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR GCA 90 bp GTCACCCTGTCATATAACTGTCTGACAGAAATAGGGGATGAGGTCTATAAAATGATTGTGTTTTCTTCCTaGCCCATTGACATTTCTAAG +
Preference number: 4 (lower is better)
Translates to: VTLSYNCLTEIGDEVYKMIVFSS*PIDISK
Trigger: CTTAGAAATGTCAATGGGGCAGGAAGAAAACACAAT...CATTTTATAGACCTCATCCCCTATTTCTGTCAGACAGTTATATGACAGGGTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR GCA 90 bp TTGCCCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGTCTACAAAACAGAGAAATACTAAAATaGAGTTGTCTAGCAGCCGTA +
Preference number: 4 (lower is better)
Translates to: LPRTKDLCHSFNLLGLQNREILK*SCLAAV
Trigger: TACGGCTGCTAGACAACTGCATTTTAGTATTTCTCT...GTTTTGTAGACCCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGGGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR GCA 90 bp TTGCCCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGTCTACAAAACATTGTGTTTTCTTCCTaGCCCATTGACATTTCTAAG +
Preference number: 4 (lower is better)
Translates to: LPRTKDLCHSFNLLGLQNIVFSS*PIDISK
Trigger: CTTAGAAATGTCAATGGGGCAGGAAGAAAACACAAT...GTTTTGTAGACCCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGGGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CCA 90 bp AGTTGTCTAGCAGCCGTACTCCAATTATTAGTCATTAGACCTGCATGTGAGATTTCCCAAGTGTCTTGTTaGAAATTAATCATGTGGAAA +
Preference number: 4 (lower is better)
Translates to: SCLAAVLQLLVIRPACEISQVSC*KLIMWK
Trigger: TTTCCACATGATTAATTTCCAACAAGACACTTGGGA...AATCTCACATGCAGGTCTAATGACTAATAATTGGAGTACGGCTGCTAGACAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CCA 90 bp ATTCAATCTTCTGGGTCTACAAAACCAGGAGAATGGAAGAGAAATACTAAAATGTTAGTGTACATGGCCTaGCCTTTGAAATACAAGGAG +
Preference number: 4 (lower is better)
Translates to: IQSSGSTKPGEWKRNTKMLVYMA*PLKYKE
Trigger: CTCCTTGTATTTCAAAGGCCAGGCCATGTACACTAA...CATTTTAGTATTTCTCTTCCATTCTCCTGGTTTTGTAGACCCAGAAGATTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR TCA 90 bp ATTCAATCTTCTGGGTCTACAAAACCAGGAGAATGGAAGAGAAATACTAAAATGACCAAAGCTCCAAAGTaGGTTAGAAATGCATTAGAG +
Preference number: 4 (lower is better)
Translates to: IQSSGSTKPGEWKRNTKMTKAPK*VRNALE
Trigger: CTCTAATGCATTTCTAACTCACTTTGGAGCTTTGGT...CATTTTAGTATTTCTCTTCCATTCTCCTGGTTTTGTAGACCCAGAAGATTGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CCA 90 bp ATGTCACTCATTCAATCTTCTGGGTCTACAAAACCAGGAGAATGGAAGAGAAATTCCCAAGTGTCTTGTTaGAAATTAATCATGTGGAAA +
Preference number: 4 (lower is better)
Translates to: MSLIQSSGSTKPGEWKRNSQVSC*KLIMWK
Trigger: TTTCCACATGATTAATTTCCAACAAGACACTTGGGA...ATTTCTCTTCCATTCTCCTGGTTTTGTAGACCCAGAAGATTGAATGAGTGACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS GCA 90 bp ACGCCACGCTGCTCTCGTACAGGGTCTGGTAGGCAGCGATGGTCATaGGGATCTCGTCCCGGACTCGCAGCAGCAGCAGCCCCCTCTCCG +
Preference number: 5 (lower is better)
Translates to: TPRCSRTGSGRQRWS*GSRPGLAAAAAPSP
Trigger: CGGAGAGGGGGCTGCTGCTGCTGCGAGTCCGGGACGAGATCCGCATGACCATCGCTGCCTACCAGACCCTGTACGAGAGCAGCGTGGCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296218.8
ENST00000466723.1
ENST00000467277.1
ENST00000497858.1
ENST00000652629.1
CDS CCA 90 bp TGCCAAACGCCACGCTGCTCTCGTACAGGGTCTGGTAGGCAGCGATaGTCATGCGGATCTCGTCCCGGACTCGCAGCAGCAGCAGCCCCC +
Preference number: 5 (lower is better)
Translates to: CQTPRCSRTGSGRQR*SCGSRPGLAAAAAP
Trigger: GGGGGCTGCTGCTGCTGCGAGTCCGGGACGAGATCCGCATGACCATCGCTGCCTACCAGACCCTGTACGAGAGCAGCGTGGCGTTTGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296218.8
ENST00000466723.1
ENST00000467277.1
ENST00000497858.1
ENST00000652629.1
CDS GCA 90 bp TGGAGGTGCACCACGTCCATCCTGGTGCTAGGGGTGCTGGACACCTaGTGGATCCATAGCTGCGTGTCTTCCACCCACTCCCTTGGGGGT +
Preference number: 5 (lower is better)
Translates to: WRCTTSILVLGVLDT*WIHSCVSSTHSLGG
Trigger: ACCCCCAAGGGAGTGGGTGGAAGACACGCAGCTATGGATCCAGCAGGTGTCCAGCACCCCTAGCACCAGGATGGACGTGGTGCACCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS GCA 90 bp CTGGCCTGCCGCTGCTGCAGCTTTAAGTCTAACTGCTCCTGGAGGTaGACCACGTCCATCCTGGTGCTAGGGGTGCTGGACACCTGCTGG +
Preference number: 5 (lower is better)
Translates to: LACRCCSFKSNCSWR*TTSILVLGVLDTCW
Trigger: CCAGCAGGTGTCCAGCACCCCTAGCACCAGGATGGACGTGGTGCACCTCCAGGAGCAGTTAGACTTAAAGCTGCAGCAGCGGCAGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS CCA 90 bp CCGAGCCTTGGGGCTCCGTTTCTCCGTGTTCCGGCTCACCAGCACTaGGGTGTCGTACTTGAGCAAAGAGTCTGCGGGCGGAATCATGGC +
Preference number: 5 (lower is better)
Translates to: PSLGAPFLRVPAHQH*GVVLEQRVCGRNHG
Trigger: GCCATGATTCCGCCCGCAGACTCTTTGCTCAAGTACGACACCCCAGTGCTGGTGAGCCGGAACACGGAGAAACGGAGCCCCAAGGCTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296218.8
ENST00000490312.1
ENST00000652629.1
CDS GCA 90 bp GTTCCGGCTCACCAGCACTGGGGTGTCGTACTTGAGCAAAGAGTCTaGGGGCGGAATCATGGCGGAGGCGAGAGTAGCAACCCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: VPAHQHWGVVLEQRV*GRNHGGGESSNPAA
Trigger: AGCTGCTGGGTTGCTACTCTCGCCTCCGCCATGATTCCGCCCGCAGACTCTTTGCTCAAGTACGACACCCCAGTGCTGGTGAGCCGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296218.8
ENST00000490312.1
ENST00000652629.1
CDS GCA 90 bp TCCCTGCGGACAGGGCAGATGCCTGTTTCCCTGGCCTGCCGCTGCTaGAGCTTTAAGTCTAACTGCTCCTGGAGGTGCACCACGTCCATC +
Preference number: 5 (lower is better)
Translates to: SLRTGQMPVSLACRC*SFKSNCSWRCTTSI
Trigger: GATGGACGTGGTGCACCTCCAGGAGCAGTTAGACTTAAAGCTGCAGCAGCGGCAGGCCAGGGAAACAGGCATCTGCCCTGTCCGCAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS GCA 90 bp AGTTCCCTGCGGACAGGGCAGATGCCTGTTTCCCTGGCCTGCCGCTaGTGCAGCTTTAAGTCTAACTGCTCCTGGAGGTGCACCACGTCC +
Preference number: 5 (lower is better)
Translates to: SSLRTGQMPVSLACR*CSFKSNCSWRCTTS
Trigger: GGACGTGGTGCACCTCCAGGAGCAGTTAGACTTAAAGCTGCAGCAGCGGCAGGCCAGGGAAACAGGCATCTGCCCTGTCCGCAGGGAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS GCA 90 bp TCCCCTGCTCAGCCTGCAGTGCCTTCCTCATGCCAAACGCCACGCTaGTCTCGTACAGGGTCTGGTAGGCAGCGATGGTCATGCGGATCT +
Preference number: 5 (lower is better)
Translates to: SPAQPAVPSSCQTPR*SRTGSGRQRWSCGS
Trigger: AGATCCGCATGACCATCGCTGCCTACCAGACCCTGTACGAGAGCAGCGTGGCGTTTGGCATGAGGAAGGCACTGCAGGCTGAGCAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296218.8
ENST00000466723.1
ENST00000467277.1
ENST00000497858.1
ENST00000652629.1
CDS CCA 90 bp AGGTGCACCACGTCCATCCTGGTGCTAGGGGTGCTGGACACCTGCTaGATCCATAGCTGCGTGTCTTCCACCCACTCCCTTGGGGGTAGT +
Preference number: 5 (lower is better)
Translates to: RCTTSILVLGVLDTC*IHSCVSSTHSLGGS
Trigger: ACTACCCCCAAGGGAGTGGGTGGAAGACACGCAGCTATGGATCCAGCAGGTGTCCAGCACCCCTAGCACCAGGATGGACGTGGTGCACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS CCA 90 bp GTTTCCCTGGCCTGCCGCTGCTGCAGCTTTAAGTCTAACTGCTCCTaGAGGTGCACCACGTCCATCCTGGTGCTAGGGGTGCTGGACACC +
Preference number: 5 (lower is better)
Translates to: VSLACRCCSFKSNCS*RCTTSILVLGVLDT
Trigger: GGTGTCCAGCACCCCTAGCACCAGGATGGACGTGGTGCACCTCCAGGAGCAGTTAGACTTAAAGCTGCAGCAGCGGCAGGCCAGGGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS GCA 90 bp ATGCCTGTTTCCCTGGCCTGCCGCTGCTGCAGCTTTAAGTCTAACTaGTCCTGGAGGTGCACCACGTCCATCCTGGTGCTAGGGGTGCTG +
Preference number: 5 (lower is better)
Translates to: MPVSLACRCCSFKSN*SWRCTTSILVLGVL
Trigger: CAGCACCCCTAGCACCAGGATGGACGTGGTGCACCTCCAGGAGCAGTTAGACTTAAAGCTGCAGCAGCGGCAGGCCAGGGAAACAGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS GCA 90 bp GGGAGGTCAGTGCCTGGCATGGAGCGTCTACAGCGGAAACAACTCTaGCAAGACCACCAGGCTGGCCATCATACTCAACCAGGGGTCCCT +
Preference number: 5 (lower is better)
Translates to: GRSVPGMERLQRKQL*QDHQAGHHTQPGVP
Trigger: AGGGACCCCTGGTTGAGTATGATGGCCAGCCTGGTGGTCTTGGCAGAGTTGTTTCCGCTGTAGACGCTCCATGCCAGGCACTGACCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497858.1
CDS CCA 90 bp TGCCAGGGTATATACTGCCACCCAGTGGGAGGTCAGTGCCTGGCATaGAGCGTCTACAGCGGAAACAACTCTGCCAAGACCACCAGGCTG +
Preference number: 5 (lower is better)
Translates to: CQGIYCHPVGGQCLA*SVYSGNNSAKTTRL
Trigger: CAGCCTGGTGGTCTTGGCAGAGTTGTTTCCGCTGTAGACGCTCCATGCCAGGCACTGACCTCCCACTGGGTGGCAGTATATACCCTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497858.1
CDS TCA 90 bp CCACCAGGCTGGCCATCATACTCAACCAGGGGTCCCTCACTGAGGTaGTGCAAGTCCAGGTGTCGTGACTGTCAGCAGAGCACCTTAGGA +
Preference number: 5 (lower is better)
Translates to: PPGWPSYSTRGPSLR*CKSRCRDCQQSTLG
Trigger: TCCTAAGGTGCTCTGCTGACAGTCACGACACCTGGACTTGCATCACCTCAGTGAGGGACCCCTGGTTGAGTATGATGGCCAGCCTGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497858.1
CDS TCA 90 bp CAAGACCACCAGGCTGGCCATCATACTCAACCAGGGGTCCCTCACTaGGGTGATGCAAGTCCAGGTGTCGTGACTGTCAGCAGAGCACCT +
Preference number: 5 (lower is better)
Translates to: QDHQAGHHTQPGVPH*GDASPGVVTVSRAP
Trigger: AGGTGCTCTGCTGACAGTCACGACACCTGGACTTGCATCACCTCAGTGAGGGACCCCTGGTTGAGTATGATGGCCAGCCTGGTGGTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497858.1
CDS GCA 90 bp CTCCGCACAGTTGATGGTGACCTCCCGGATCAACTCATCTTCCAATaGACACACACCATGAGATCAGACAGGGCGTGGGGAGGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: LRTVDGDLPDQLIFQ*THTMRSDRAWGGGL
Trigger: CAAGCCCCCTCCCCACGCCCTGTCTGATCTCATGGTGTGTGTGCATTGGAAGATGAGTTGATCCGGGAGGTCACCATCAACTGTGCGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000467277.1
ENST00000497858.1
CDS CCA 90 bp ACTGTGAGTAGAGTTCCCTGCGGACAGGGCAGATGCCTGTTTCCCTaGCCTGCCGCTGCTGCAGCTTTAAGTCTAACTGCTCCTGGAGGT +
Preference number: 5 (lower is better)
Translates to: TVSRVPCGQGRCLFP*PAAAAALSLTAPGG
Trigger: ACCTCCAGGAGCAGTTAGACTTAAAGCTGCAGCAGCGGCAGGCCAGGGAAACAGGCATCTGCCCTGTCCGCAGGGAACTCTACTCACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS CCA 90 bp GCTTCTTCTCCTCCACCTGCCGCCTCTCGCTCTCCCGCTTCTCAGTaGCTTCACATTTTGCCTTCTGCTCGTTCACTTGCCTCTCCAGGT +
Preference number: 5 (lower is better)
Translates to: ASSPPPAASRSPASQ*LHILPSARSLASPG
Trigger: ACCTGGAGAGGCAAGTGAACGAGCAGAAGGCAAAATGTGAAGCCACTGAGAAGCGGGAGAGCGAGAGGCGGCAGGTGGAGGAGAAGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296218.8
ENST00000467277.1
ENST00000497858.1
ENST00000652629.1
CDS CCA 90 bp AAAGTGCAAGGCCTCAGAGAAGGGCCTCAGGGAGGGTGCCTTCAGTaGCCCAAAGAGCCTTGCCATGCAGTCACTCCTCTGAACTTGGCA +
Preference number: 5 (lower is better)
Translates to: KVQGLREGPQGGCLQ*PKEPCHAVTPLNLA
Trigger: TGCCAAGTTCAGAGGAGTGACTGCATGGCAAGGCTCTTTGGGCCACTGAAGGCACCCTCCCTGAGGCCCTTCTCTGAGGCCTTGCACTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497858.1
CDS GCA 90 bp TCCGTCTCCAATTCTGCGATTTTCCTCTCCATGTCTGACTTCCCCTaGTCAGCCTGCAGTGCCTTCCTCATGCCAAACGCCACGCTGCTC +
Preference number: 5 (lower is better)
Translates to: SVSNSAIFLSMSDFP*SACSAFLMPNATLL
Trigger: GAGCAGCGTGGCGTTTGGCATGAGGAAGGCACTGCAGGCTGAGCAGGGGAAGTCAGACATGGAGAGGAAAATCGCAGAATTGGAGACGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296218.8
ENST00000466723.1
ENST00000467277.1
ENST00000652629.1
CDS GCA 90 bp AGAGAAGGGCCTCAGGGAGGGTGCCTTCAGTGGCCCAAAGAGCCTTaGCATGCAGTCACTCCTCTGAACTTGGCACTTGTGAGTAGCACA +
Preference number: 5 (lower is better)
Translates to: REGPQGGCLQWPKEP*HAVTPLNLALVSST
Trigger: TGTGCTACTCACAAGTGCCAAGTTCAGAGGAGTGACTGCATGGCAAGGCTCTTTGGGCCACTGAAGGCACCCTCCCTGAGGCCCTTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497858.1
CDS CCA 90 bp GACATTGCCAGGGTATATACTGCCACCCAGTGGGAGGTCAGTGCCTaGCATGGAGCGTCTACAGCGGAAACAACTCTGCCAAGACCACCA +
Preference number: 5 (lower is better)
Translates to: DIARVYTATQWEVSA*HGASTAETTLPRPP
Trigger: TGGTGGTCTTGGCAGAGTTGTTTCCGCTGTAGACGCTCCATGCCAGGCACTGACCTCCCACTGGGTGGCAGTATATACCCTGGCAATGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497858.1
CDS GCA 90 bp AATTCTGCGATTTTCCTCTCCATGTCTGACTTCCCCTGCTCAGCCTaGAGTGCCTTCCTCATGCCAAACGCCACGCTGCTCTCGTACAGG +
Preference number: 5 (lower is better)
Translates to: NSAIFLSMSDFPCSA*SAFLMPNATLLSYR
Trigger: CCTGTACGAGAGCAGCGTGGCGTTTGGCATGAGGAAGGCACTGCAGGCTGAGCAGGGGAAGTCAGACATGGAGAGGAAAATCGCAGAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296218.8
ENST00000466723.1
ENST00000467277.1
ENST00000652629.1
CDS GCA 90 bp AGGGCAAACCATAATAACACACGGATAGGGAAGCCTGCTAGACCCTaGAGCTGCCTGAGGGTTTGGAGGTGGTTTGCAGATCGGCGTCCA +
Preference number: 5 (lower is better)
Translates to: RANHNNTRIGKPARP*SCLRVWRWFADRRP
Trigger: TGGACGCCGATCTGCAAACCACCTCCAAACCCTCAGGCAGCTGCAGGGTCTAGCAGGCTTCCCTATCCGTGTGTTATTATGGTTTGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497858.1
CDS CCA 90 bp AGGGACATGGGACATGACATTGCCAGGGTATATACTGCCACCCAGTaGGAGGTCAGTGCCTGGCATGGAGCGTCTACAGCGGAAACAACT +
Preference number: 5 (lower is better)
Translates to: RDMGHDIARVYTATQ*EVSAWHGASTAETT
Trigger: AGTTGTTTCCGCTGTAGACGCTCCATGCCAGGCACTGACCTCCCACTGGGTGGCAGTATATACCCTGGCAATGTCATGTCCCATGTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497858.1
CDS TCA 90 bp ATGGTGACCTCCCGGATCAACTCATCTTCCAATGCACACACACCATaGGATCAGACAGGGCGTGGGGAGGGGGCTTGCAGTATGTCTACT +
Preference number: 5 (lower is better)
Translates to: MVTSRINSSSNAHTP*DQTGRGEGACSMST
Trigger: AGTAGACATACTGCAAGCCCCCTCCCCACGCCCTGTCTGATCTCATGGTGTGTGTGCATTGGAAGATGAGTTGATCCGGGAGGTCACCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000467277.1
ENST00000497858.1
CDS GCA 90 bp CGCCTCTCGCTCTCCCGCTTCTCAGTGGCTTCACATTTTGCCTTCTaGTCGTTCACTTGCCTCTCCAGGTCTCTCTTTTCCGTCTCCAAT +
Preference number: 5 (lower is better)
Translates to: RLSLSRFSVASHFAF*SFTCLSRSLFSVSN
Trigger: ATTGGAGACGGAAAAGAGAGACCTGGAGAGGCAAGTGAACGAGCAGAAGGCAAAATGTGAAGCCACTGAGAAGCGGGAGAGCGAGAGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296218.8
ENST00000466723.1
ENST00000467277.1
ENST00000497858.1
ENST00000652629.1
CDS GCA 90 bp ACCCACTCCCTTGGGGGTAGTATGGCATTCAAGATTTCTTCTGCCTaGTTTGTAGGATCTGGGACACAGGGAGTTGAGGGGAGCTTGGTC +
Preference number: 5 (lower is better)
Translates to: THSLGGSMAFKISSA*FVGSGTQGVEGSLV
Trigger: GACCAAGCTCCCCTCAACTCCCTGTGTCCCAGATCCTACAAAGCAGGCAGAAGAAATCTTGAATGCCATACTACCCCCAAGGGAGTGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS GCA 90 bp ACTCATCAAAACACTGTGAGTAGAGTTCCCTGCGGACAGGGCAGATaGCTGTTTCCCTGGCCTGCCGCTGCTGCAGCTTTAAGTCTAACT +
Preference number: 5 (lower is better)
Translates to: THQNTVSRVPCGQGR*LFPWPAAAAALSLT
Trigger: AGTTAGACTTAAAGCTGCAGCAGCGGCAGGCCAGGGAAACAGGCATCTGCCCTGTCCGCAGGGAACTCTACTCACAGTGTTTTGATGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS CCA 90 bp CAACTCATCTTCCAATGCACACACACCATGAGATCAGACAGGGCGTaGGGAGGGGGCTTGCAGTATGTCTACTGCAAACACCCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: QLIFQCTHTMRSDRA*GGGLQYVYCKHPSS
Trigger: AGAGGAAGGGTGTTTGCAGTAGACATACTGCAAGCCCCCTCCCCACGCCCTGTCTGATCTCATGGTGTGTGTGCATTGGAAGATGAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000467277.1
ENST00000497858.1
CDS-3UTR CAA 90 bp CCCACCCTGGCTTGCCCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGCTGGGACACAGGGAGTaGAGGGGAGCTTGGTCTTGG +
Preference number: 5 (lower is better)
Translates to: PTLACPELKIYVTHSIFWLGHRE*RGAWSW
Trigger: CCAAGACCAAGCTCCCCTCAACTCCCTGTGTCCCAG...CCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGGGCAAGCCAGGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CAA 90 bp CCCACCCTGGCTTGCCCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGCAGTGTGGGCCTTGTTaGCCGTCACCATGGAAACCG +
Preference number: 5 (lower is better)
Translates to: PTLACPELKIYVTHSIFWQCGPC*PSPWKP
Trigger: CGGTTTCCATGGTGACGGCAAACAAGGCCCACACTG...CCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGGGCAAGCCAGGGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296218.8
CDS-3UTR CAA 90 bp CCCACCCTGGCTTGCCCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGACTGGGGTGTCGTACTaGAGCAAAGAGTCTGCGGGC +
Preference number: 5 (lower is better)
Translates to: PTLACPELKIYVTHSIFWTGVSY*SKESAG
Trigger: GCCCGCAGACTCTTTGCTCAAGTACGACACCCCAGT...CCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGGGCAAGCCAGGGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS TCA 90 bp AAAGCCATGAGATTGGGTGACAGCATGCAGGAAATGAGGGTAGATTaGGAAGAGGTCTCCCACCACCCTGCCAGGATCCAGCCATATGTA +
Preference number: 5 (lower is better)
Translates to: KAMRLGDSMQEMRVD*EEVSHHPARIQPYV
Trigger: TACATATGGCTGGATCCTGGCAGGGTGGTGGGAGACCTCTTCTCAATCTACCCTCATTTCCTGCATGCTGTCACCCAATCTCATGGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490312.1
CDS CCA 90 bp TGGCCAGAGCAAAGGAGACAAGAGGCTCTGGTTTGTTTACAGCACTaGGTCCCCTCCCTTCCTGCCTTAGGTAAAAACTGGTTACTACTC +
Preference number: 5 (lower is better)
Translates to: WPEQRRQEALVCLQH*VPSLPALGKNWLLL
Trigger: GAGTAGTAACCAGTTTTTACCTAAGGCAGGAAGGGAGGGGACCCAGTGCTGTAAACAAACCAGAGCCTCTTGTCTCCTTTGCTCTGGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497858.1
CDS-3UTR CAA 90 bp AGTGATGATGAGAAAGCAGTGGCTTTCTTAGAATTTGAGTTGGCAGTTCCCAAGCCCCTCTCCGCACAGTaGATGGTGACCTCCCGGATC +
Preference number: 5 (lower is better)
Translates to: SDDEKAVAFLEFELAVPKPLSAQ*MVTSRI
Trigger: GATCCGGGAGGTCACCATCAACTGTGCGGAGAGGGG...CTTGGGAACTGCCAACTCAAATTCTAAGAAAGCCACTGCTTTCTCATCATCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS GCA 90 bp CTTTCTTACCTTGGGGGTAGTATGGCATTCAAGATTTCTTCTGCCTaGTTTGTAGGATCTGGGACACAGGGAGTTGAGGGGAGCTTGGTC +
Preference number: 5 (lower is better)
Translates to: LSYLGGSMAFKISSA*FVGSGTQGVEGSLV
Trigger: GACCAAGCTCCCCTCAACTCCCTGTGTCCCAGATCCTACAAAGCAGGCAGAAGAAATCTTGAATGCCATACTACCCCCAAGGTAAGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490312.1
CDS-3UTR CAA 90 bp GTCACCCTGTCATATAACTGTCTGACAGAAATAGGGGATGAGGTCTATAAAATGGAGGGGAGCTTGGTCTaGGGTGGCTGTGGGGCTGAA +
Preference number: 5 (lower is better)
Translates to: VTLSYNCLTEIGDEVYKMEGSLV*GGCGAE
Trigger: TTCAGCCCCACAGCCACCCAAGACCAAGCTCCCCTC...CATTTTATAGACCTCATCCCCTATTTCTGTCAGACAGTTATATGACAGGGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CAA 90 bp AGTGATGATGAGAAAGCAGTGGCTTTCTTAGAATTTGAGTTGGCAGTTCCCAAGCTGGGACACAGGGAGTaGAGGGGAGCTTGGTCTTGG +
Preference number: 5 (lower is better)
Translates to: SDDEKAVAFLEFELAVPKLGHRE*RGAWSW
Trigger: CCAAGACCAAGCTCCCCTCAACTCCCTGTGTCCCAG...CTTGGGAACTGCCAACTCAAATTCTAAGAAAGCCACTGCTTTCTCATCATCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CAA 90 bp CCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGTCTACAAAACCAGGCCCCTCTCCGCACAGTaGATGGTGACCTCCCGGATC +
Preference number: 5 (lower is better)
Translates to: PELKIYVTHSIFWVYKTRPLSAQ*MVTSRI
Trigger: GATCCGGGAGGTCACCATCAACTGTGCGGAGAGGGG...CCTGGTTTTGTAGACCCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CAA 90 bp CCCACCCTGGCTTGCCCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGCTTCTGCTCGTTCACTaGCCTCTCCAGGTCTCTCTT +
Preference number: 5 (lower is better)
Translates to: PTLACPELKIYVTHSIFWLLLVH*PLQVSL
Trigger: AAGAGAGACCTGGAGAGGCAAGTGAACGAGCAGAAG...CCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGGGCAAGCCAGGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CAA 90 bp CCCACCCTGGCTTGCCCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGCTAGCCCACCCTGGCTaGCCCCGAACTAAAGATTTA +
Preference number: 5 (lower is better)
Translates to: PTLACPELKIYVTHSIFWLAHPG*PRTKDL
Trigger: TAAATCTTTAGTTCGGGGCAAGCCAGGGTGGGCTAG...CCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGGGCAAGCCAGGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CAA 90 bp CCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGTCTACAAAACCAGGACTGGGGTGTCGTACTaGAGCAAAGAGTCTGCGGGC +
Preference number: 5 (lower is better)
Translates to: PELKIYVTHSIFWVYKTRTGVSY*SKESAG
Trigger: GCCCGCAGACTCTTTGCTCAAGTACGACACCCCAGT...CCTGGTTTTGTAGACCCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CAA 90 bp CCCACCCTGGCTTGCCCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGCCTTCAGCTGCTGATTaGTTCGCTTCAGGAACTGAA +
Preference number: 5 (lower is better)
Translates to: PTLACPELKIYVTHSIFWPSAAD*FASGTE
Trigger: TTCAGTTCCTGAAGCGAACAAATCAGCAGCTGAAGG...CCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGGGCAAGCCAGGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CAA 90 bp CCCACCCTGGCTTGCCCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGTTCTTAGAATTTGAGTaGGCAGTTCCCAAGGCTGGC +
Preference number: 5 (lower is better)
Translates to: PTLACPELKIYVTHSIFWFLEFE*AVPKAG
Trigger: GCCAGCCTTGGGAACTGCCAACTCAAATTCTAAGAA...CCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGGGCAAGCCAGGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CAA 90 bp CCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGTCTACAAAACCAGGTGTCCAGTGTGGGCCTaGTTTGCCGTCACCATGGAA +
Preference number: 5 (lower is better)
Translates to: PELKIYVTHSIFWVYKTRCPVWA*FAVTME
Trigger: TTCCATGGTGACGGCAAACAAGGCCCACACTGGACA...CCTGGTTTTGTAGACCCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296218.8
CDS-3UTR CAA 90 bp ATTCAATCTTCTGGGTCTACAAAACCAGGAGAATGGAAGAGAAATACTAAAATGGGAGTTGAGGGGAGCTaGGTCTTGGGTGGCTGTGGG +
Preference number: 5 (lower is better)
Translates to: IQSSGSTKPGEWKRNTKMGVEGS*VLGGCG
Trigger: CCCACAGCCACCCAAGACCAAGCTCCCCTCAACTCC...CATTTTAGTATTTCTCTTCCATTCTCCTGGTTTTGTAGACCCAGAAGATTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CAA 90 bp AATTTCAAGGACGTTAGTGTACATGGCCTGGCCTTTGAAATACAAGGAGAAAGTCTTCCACCCACTCCCTaGGGGGTAGTATGGCATTCA +
Preference number: 5 (lower is better)
Translates to: NFKDVSVHGLAFEIQGESLPPTP*GVVWHS
Trigger: TGAATGCCATACTACCCCCAAGGGAGTGGGTGGAAG...ACTTTCTCCTTGTATTTCAAAGGCCAGGCCATGTACACTAACGTCCTTGAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CAA 90 bp AATTTCAAGGACGTTAGTGTACATGGCCTGGCCTTTGAAATACAAGGAGAAAGTGGGGGAAGAGCTGAGTaGCAGACAACTCACAAAGGC +
Preference number: 5 (lower is better)
Translates to: NFKDVSVHGLAFEIQGESGGRAE*QTTHKG
Trigger: GCCTTTGTGAGTTGTCTGCAACTCAGCTCTTCCCCC...ACTTTCTCCTTGTATTTCAAAGGCCAGGCCATGTACACTAACGTCCTTGAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CAA 90 bp GTCACCCTGTCATATAACTGTCTGACAGAAATAGGGGATGAGGTCTATAAAATGGGGGGAAGAGCTGAGTaGCAGACAACTCACAAAGGC +
Preference number: 5 (lower is better)
Translates to: VTLSYNCLTEIGDEVYKMGGRAE*QTTHKG
Trigger: GCCTTTGTGAGTTGTCTGCAACTCAGCTCTTCCCCC...CATTTTATAGACCTCATCCCCTATTTCTGTCAGACAGTTATATGACAGGGTGAC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CAA 90 bp CCCACCCTGGCTTGCCCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGACACAGGCAGGTCATTaGAGTGGAGGCTTAAAATTC +
Preference number: 5 (lower is better)
Translates to: PTLACPELKIYVTHSIFWTQAGH*SGGLKF
Trigger: GAATTTTAAGCCTCCACTCAAATGACCTGCCTGTGT...CCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGGGCAAGCCAGGGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CAA 90 bp ATTCAATCTTCTGGGTCTACAAAACCAGGAGAATGGAAGAGAAATACTAAAATGTTCAGTAGCCGAGCCTaGGGGCTCCGTTTCTCCGTG +
Preference number: 5 (lower is better)
Translates to: IQSSGSTKPGEWKRNTKMFSSRA*GLRFSV
Trigger: CACGGAGAAACGGAGCCCCAAGGCTCGGCTACTGAA...CATTTTAGTATTTCTCTTCCATTCTCCTGGTTTTGTAGACCCAGAAGATTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CAA 90 bp CCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGTCTACAAAACCAGGCTAGCCCACCCTGGCTaGCCCCGAACTAAAGATTTA +
Preference number: 5 (lower is better)
Translates to: PELKIYVTHSIFWVYKTRLAHPG*PRTKDL
Trigger: TAAATCTTTAGTTCGGGGCAAGCCAGGGTGGGCTAG...CCTGGTTTTGTAGACCCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CAA 90 bp CCCACCCTGGCTTGCCCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGTACATGGCCTGGCCTTaGAAATACAAGGAGAAAGTT +
Preference number: 5 (lower is better)
Translates to: PTLACPELKIYVTHSIFWYMAWP*KYKEKV
Trigger: AACTTTCTCCTTGTATTTCAAAGGCCAGGCCATGTA...CCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGGGCAAGCCAGGGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CAA 90 bp TTGCCCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGTCTACAAAACCTTCTGCTCGTTCACTaGCCTCTCCAGGTCTCTCTT +
Preference number: 5 (lower is better)
Translates to: LPRTKDLCHSFNLLGLQNLLLVH*PLQVSL
Trigger: AAGAGAGACCTGGAGAGGCAAGTGAACGAGCAGAAG...GTTTTGTAGACCCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CAA 90 bp AATTTCAAGGACGTTAGTGTACATGGCCTGGCCTTTGAAATACAAGGAGAAAGTGTGCAGAGTCAGGGCTaGATTTTCTGCAGGATAAGG +
Preference number: 5 (lower is better)
Translates to: NFKDVSVHGLAFEIQGESVQSQG*IFCRIR
Trigger: CCTTATCCTGCAGAAAATCAAGCCCTGACTCTGCAC...ACTTTCTCCTTGTATTTCAAAGGCCAGGCCATGTACACTAACGTCCTTGAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CAA 90 bp AGTTGTCTAGCAGCCGTACTCCAATTATTAGTCATTAGACCTGCATGTGAGATTCAGTGGCTTCACATTTaGCCTTCTGCTCGTTCACTT +
Preference number: 5 (lower is better)
Translates to: SCLAAVLQLLVIRPACEIQWLHI*PSARSL
Trigger: AAGTGAACGAGCAGAAGGCAAAATGTGAAGCCACTG...AATCTCACATGCAGGTCTAATGACTAATAATTGGAGTACGGCTGCTAGACAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CAA 90 bp AATTTCAAGGACGTTAGTGTACATGGCCTGGCCTTTGAAATACAAGGAGAAAGTAATAATGCCTTCCAGTaGGGCCTTCAGCTGCTGATT +
Preference number: 5 (lower is better)
Translates to: NFKDVSVHGLAFEIQGESNNAFQ*GLQLLI
Trigger: AATCAGCAGCTGAAGGCCCAACTGGAAGGCATTATT...ACTTTCTCCTTGTATTTCAAAGGCCAGGCCATGTACACTAACGTCCTTGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CAA 90 bp AGTTGTCTAGCAGCCGTACTCCAATTATTAGTCATTAGACCTGCATGTGAGATTAATAATGCCTTCCAGTaGGGCCTTCAGCTGCTGATT +
Preference number: 5 (lower is better)
Translates to: SCLAAVLQLLVIRPACEINNAFQ*GLQLLI
Trigger: AATCAGCAGCTGAAGGCCCAACTGGAAGGCATTATT...AATCTCACATGCAGGTCTAATGACTAATAATTGGAGTACGGCTGCTAGACAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CAA 90 bp TTGCCCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGTCTACAAAACGTGCAGAGTCAGGGCTaGATTTTCTGCAGGATAAGG +
Preference number: 5 (lower is better)
Translates to: LPRTKDLCHSFNLLGLQNVQSQG*IFCRIR
Trigger: CCTTATCCTGCAGAAAATCAAGCCCTGACTCTGCAC...GTTTTGTAGACCCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS CCA 90 bp GATATCTTCATGAAGATAATGAGGAAGCAGAAGACTATATGGTCCTaGAGTTTAGTGGAGAAGACAGGGCTGGAAATACACATTTGGGAG +
Preference number: 5 (lower is better)
Translates to: DIFMKIMRKQKTIWS*SLVEKTGLEIHIWE
Trigger: CTCCCAAATGTGTATTTCCAGCCCTGTCTTCTCCACTAAACTCCAGGACCATATAGTCTTCTGCTTCCTCATTATCTTCATGAAGATATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490312.1
CDS-3UTR CAA 90 bp TTGCCCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGTCTACAAAACCAGTGGCTTCACATTTaGCCTTCTGCTCGTTCACTT +
Preference number: 5 (lower is better)
Translates to: LPRTKDLCHSFNLLGLQNQWLHI*PSARSL
Trigger: AAGTGAACGAGCAGAAGGCAAAATGTGAAGCCACTG...GTTTTGTAGACCCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CAA 90 bp ATGTCACTCATTCAATCTTCTGGGTCTACAAAACCAGGAGAATGGAAGAGAAATCCTTCAGCTGCTGATTaGTTCGCTTCAGGAACTGAA +
Preference number: 5 (lower is better)
Translates to: MSLIQSSGSTKPGEWKRNPSAAD*FASGTE
Trigger: TTCAGTTCCTGAAGCGAACAAATCAGCAGCTGAAGG...ATTTCTCTTCCATTCTCCTGGTTTTGTAGACCCAGAAGATTGAATGAGTGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CAA 90 bp AGTGATGATGAGAAAGCAGTGGCTTTCTTAGAATTTGAGTTGGCAGTTCCCAAGAATACTAAAATGCAGTaGTCTAGCAGCCGTACTCCA +
Preference number: 5 (lower is better)
Translates to: SDDEKAVAFLEFELAVPKNTKMQ*SSSRTP
Trigger: TGGAGTACGGCTGCTAGACAACTGCATTTTAGTATT...CTTGGGAACTGCCAACTCAAATTCTAAGAAAGCCACTGCTTTCTCATCATCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CAA 90 bp AGTTGTCTAGCAGCCGTACTCCAATTATTAGTCATTAGACCTGCATGTGAGATTACACAGGCAGGTCATTaGAGTGGAGGCTTAAAATTC +
Preference number: 5 (lower is better)
Translates to: SCLAAVLQLLVIRPACEITQAGH*SGGLKF
Trigger: GAATTTTAAGCCTCCACTCAAATGACCTGCCTGTGT...AATCTCACATGCAGGTCTAATGACTAATAATTGGAGTACGGCTGCTAGACAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CAA 90 bp AGTGATGATGAGAAAGCAGTGGCTTTCTTAGAATTTGAGTTGGCAGTTCCCAAGTACATGGCCTGGCCTTaGAAATACAAGGAGAAAGTT +
Preference number: 5 (lower is better)
Translates to: SDDEKAVAFLEFELAVPKYMAWP*KYKEKV
Trigger: AACTTTCTCCTTGTATTTCAAAGGCCAGGCCATGTA...CTTGGGAACTGCCAACTCAAATTCTAAGAAAGCCACTGCTTTCTCATCATCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CAA 90 bp GTCACCCTGTCATATAACTGTCTGACAGAAATAGGGGATGAGGTCTATAAAATGCTCCCAAGTGTCTTGTaGGAAATTAATCATGTGGAA +
Preference number: 5 (lower is better)
Translates to: VTLSYNCLTEIGDEVYKMLPSVL*EINHVE
Trigger: TTCCACATGATTAATTTCCAACAAGACACTTGGGAG...CATTTTATAGACCTCATCCCCTATTTCTGTCAGACAGTTATATGACAGGGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS-3UTR CAA 90 bp TTGCCCCGAACTAAAGATTTATGTCACTCATTCAATCTTCTGGGTCTACAAAACAATACTAAAATGCAGTaGTCTAGCAGCCGTACTCCA +
Preference number: 5 (lower is better)
Translates to: LPRTKDLCHSFNLLGLQNNTKMQ*SSSRTP
Trigger: TGGAGTACGGCTGCTAGACAACTGCATTTTAGTATT...GTTTTGTAGACCCAGAAGATTGAATGAGTGACATAAATCTTTAGTTCGGGGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS GCA 72 bp TGCTCTCGTACAGGGTCTGGTAGGCAGCGATGGTCATaGGGATCTCGTCCCGGACTCGCAGCAGCAGCAGCC +
Preference number: 6 (lower is better)
Translates to: CSRTGSGRQRWS*GSRPGLAAAAA
Trigger: GGCTGCTGCTGCTGCGAGTCCGGGACGAGATCCGCATGACCATCGCTGCCTACCAGACCCTGTACGAGAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296218.8
ENST00000466723.1
ENST00000467277.1
ENST00000497858.1
ENST00000652629.1
CDS CCA 72 bp GGGGCTCCGTTTCTCCGTGTTCCGGCTCACCAGCACTaGGGTGTCGTACTTGAGCAAAGAGTCTGCGGGCGG +
Preference number: 6 (lower is better)
Translates to: GAPFLRVPAHQH*GVVLEQRVCGR
Trigger: CCGCCCGCAGACTCTTTGCTCAAGTACGACACCCCAGTGCTGGTGAGCCGGAACACGGAGAAACGGAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296218.8
ENST00000466723.1
ENST00000490312.1
ENST00000652629.1
CDS CCA 72 bp CCACGCTGCTCTCGTACAGGGTCTGGTAGGCAGCGATaGTCATGCGGATCTCGTCCCGGACTCGCAGCAGCA +
Preference number: 6 (lower is better)
Translates to: PRCSRTGSGRQR*SCGSRPGLAAA
Trigger: TGCTGCTGCGAGTCCGGGACGAGATCCGCATGACCATCGCTGCCTACCAGACCCTGTACGAGAGCAGCGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296218.8
ENST00000466723.1
ENST00000467277.1
ENST00000497858.1
ENST00000652629.1
CDS TCA 72 bp CCGTGTTCCGGCTCACCAGCACTGGGGTGTCGTACTTaGGCAAAGAGTCTGCGGGCGGAATCATGGCGGAGG +
Preference number: 6 (lower is better)
Translates to: PCSGSPALGCRT*AKSLRAESWRR
Trigger: CCTCCGCCATGATTCCGCCCGCAGACTCTTTGCTCAAGTACGACACCCCAGTGCTGGTGAGCCGGAACACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296218.8
ENST00000490312.1
ENST00000652629.1
CDS CCA 72 bp GGCCTCAGAGAAGGGCCTCAGGGAGGGTGCCTTCAGTaGCCCAAAGAGCCTTGCCATGCAGTCACTCCTCTG +
Preference number: 6 (lower is better)
Translates to: GLREGPQGGCLQ*PKEPCHAVTPL
Trigger: CAGAGGAGTGACTGCATGGCAAGGCTCTTTGGGCCACTGAAGGCACCCTCCCTGAGGCCCTTCTCTGAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497858.1
CDS CAA 72 bp GGATCTGGGACACAGGGAGTTGAGGGGAGCTTGGTCTaGGGTGGCTGTGGGGCTGAACCTGAAGGTCCAGGC +
Preference number: 6 (lower is better)
Translates to: GSGTQGVEGSLV*GGCGAEPEGPG
Trigger: GCCTGGACCTTCAGGTTCAGCCCCACAGCCACCCAAGACCAAGCTCCCCTCAACTCCCTGTGTCCCAGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296218.8
ENST00000466723.1
ENST00000490312.1
ENST00000652629.1
CDS CAA 90 bp TGCTTTGTAGGATCTGGGACACAGGGAGTTGAGGGGAGCTTGGTCTaGGGTGGCTGTGGGGCTGAACCTGAAGGTCCAGGCTGCTGGGGG +
Preference number: 6 (lower is better)
Translates to: CFVGSGTQGVEGSLV*GGCGAEPEGPGCWG
Trigger: CCCCCAGCAGCCTGGACCTTCAGGTTCAGCCCCACAGCCACCCAAGACCAAGCTCCCCTCAACTCCCTGTGTCCCAGATCCTACAAAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296218.8
ENST00000466723.1
ENST00000490312.1
ENST00000652629.1
CDS GCA 72 bp ACCACGTCCATCCTGGTGCTAGGGGTGCTGGACACCTaGTGGATCCATAGCTGCGTGTCTTCCACCCACTCC +
Preference number: 6 (lower is better)
Translates to: TTSILVLGVLDT*WIHSCVSSTHS
Trigger: GGAGTGGGTGGAAGACACGCAGCTATGGATCCAGCAGGTGTCCAGCACCCCTAGCACCAGGATGGACGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS GCA 72 bp CGGACAGGGCAGATGCCTGTTTCCCTGGCCTGCCGCTaGTGCAGCTTTAAGTCTAACTGCTCCTGGAGGTGC +
Preference number: 6 (lower is better)
Translates to: RTGQMPVSLACR*CSFKSNCSWRC
Trigger: GCACCTCCAGGAGCAGTTAGACTTAAAGCTGCAGCAGCGGCAGGCCAGGGAAACAGGCATCTGCCCTGTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS GCA 72 bp CTGACTTCCCCTGCTCAGCCTGCAGTGCCTTCCTCATaGCAAACGCCACGCTGCTCTCGTACAGGGTCTGGT +
Preference number: 6 (lower is better)
Translates to: LTSPAQPAVPSS*QTPRCSRTGSG
Trigger: ACCAGACCCTGTACGAGAGCAGCGTGGCGTTTGGCATGAGGAAGGCACTGCAGGCTGAGCAGGGGAAGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296218.8
ENST00000466723.1
ENST00000467277.1
ENST00000497858.1
ENST00000652629.1
CDS CCA 72 bp GCCTGCCGCTGCTGCAGCTTTAAGTCTAACTGCTCCTaGAGGTGCACCACGTCCATCCTGGTGCTAGGGGTG +
Preference number: 6 (lower is better)
Translates to: ACRCCSFKSNCS*RCTTSILVLGV
Trigger: CACCCCTAGCACCAGGATGGACGTGGTGCACCTCCAGGAGCAGTTAGACTTAAAGCTGCAGCAGCGGCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS CAA 72 bp TCCGTGTTCCGGCTCACCAGCACTGGGGTGTCGTACTaGAGCAAAGAGTCTGCGGGCGGAATCATGGCGGAG +
Preference number: 6 (lower is better)
Translates to: SVFRLTSTGVSY*SKESAGGIMAE
Trigger: CTCCGCCATGATTCCGCCCGCAGACTCTTTGCTCAAGTACGACACCCCAGTGCTGGTGAGCCGGAACACGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296218.8
ENST00000490312.1
ENST00000652629.1
CDS CAA 90 bp CTCCGTTTCTCCGTGTTCCGGCTCACCAGCACTGGGGTGTCGTACTaGAGCAAAGAGTCTGCGGGCGGAATCATGGCGGAGGCGAGAGTA +
Preference number: 6 (lower is better)
Translates to: LRFSVFRLTSTGVSY*SKESAGGIMAEARV
Trigger: TACTCTCGCCTCCGCCATGATTCCGCCCGCAGACTCTTTGCTCAAGTACGACACCCCAGTGCTGGTGAGCCGGAACACGGAGAAACGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296218.8
ENST00000490312.1
ENST00000652629.1
CDS CAA 90 bp TCTGCCTGCTTTGTAGGATCTGGGACACAGGGAGTTGAGGGGAGCTaGGTCTTGGGTGGCTGTGGGGCTGAACCTGAAGGTCCAGGCTGC +
Preference number: 6 (lower is better)
Translates to: SACFVGSGTQGVEGS*VLGGCGAEPEGPGC
Trigger: GCAGCCTGGACCTTCAGGTTCAGCCCCACAGCCACCCAAGACCAAGCTCCCCTCAACTCCCTGTGTCCCAGATCCTACAAAGCAGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296218.8
ENST00000466723.1
ENST00000490312.1
ENST00000652629.1
CDS GCA 72 bp CACCAGCACTGGGGTGTCGTACTTGAGCAAAGAGTCTaGGGGCGGAATCATGGCGGAGGCGAGAGTAGCAAC +
Preference number: 6 (lower is better)
Translates to: HQHWGVVLEQRV*GRNHGGGESSN
Trigger: GTTGCTACTCTCGCCTCCGCCATGATTCCGCCCGCAGACTCTTTGCTCAAGTACGACACCCCAGTGCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296218.8
ENST00000490312.1
ENST00000652629.1
CDS GCA 72 bp GTGCTAGGGGTGCTGGACACCTGCTGGATCCATAGCTaGGTGTCTTCCACCCACTCCCTTGGGGGTAGTATG +
Preference number: 6 (lower is better)
Translates to: VLGVLDTCWIHS*VSSTHSLGGSM
Trigger: CATACTACCCCCAAGGGAGTGGGTGGAAGACACGCAGCTATGGATCCAGCAGGTGTCCAGCACCCCTAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS GCA 72 bp TCCCTGGCCTGCCGCTGCTGCAGCTTTAAGTCTAACTaGTCCTGGAGGTGCACCACGTCCATCCTGGTGCTA +
Preference number: 6 (lower is better)
Translates to: SLACRCCSFKSN*SWRCTTSILVL
Trigger: TAGCACCAGGATGGACGTGGTGCACCTCCAGGAGCAGTTAGACTTAAAGCTGCAGCAGCGGCAGGCCAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS CCA 72 bp ACGTCCATCCTGGTGCTAGGGGTGCTGGACACCTGCTaGATCCATAGCTGCGTGTCTTCCACCCACTCCCTT +
Preference number: 6 (lower is better)
Translates to: TSILVLGVLDTC*IHSCVSSTHSL
Trigger: AAGGGAGTGGGTGGAAGACACGCAGCTATGGATCCAGCAGGTGTCCAGCACCCCTAGCACCAGGATGGACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296218.8
ENST00000652629.1
CDS TCA 72 bp CAGGCTGGCCATCATACTCAACCAGGGGTCCCTCACTaGGGTGATGCAAGTCCAGGTGTCGTGACTGTCAGC +
Preference number: 6 (lower is better)
Translates to: QAGHHTQPGVPH*GDASPGVVTVS
Trigger: GCTGACAGTCACGACACCTGGACTTGCATCACCTCAGTGAGGGACCCCTGGTTGAGTATGATGGCCAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497858.1
CDS GCA 72 bp CCTCAGGGAGGGTGCCTTCAGTGGCCCAAAGAGCCTTaGCATGCAGTCACTCCTCTGAACTTGGCACTTGTG +
Preference number: 6 (lower is better)
Translates to: PQGGCLQWPKEP*HAVTPLNLALV
Trigger: CACAAGTGCCAAGTTCAGAGGAGTGACTGCATGGCAAGGCTCTTTGGGCCACTGAAGGCACCCTCCCTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497858.1
CDS GCA 72 bp ACTTTCCTCTCCATGTCTGACTTCCCCTGCTCAGCCTaGAGTGCCTTCCTCATGCCAAACGCCACGCTGCTC +
Preference number: 6 (lower is better)
Translates to: TFLSMSDFPCSA*SAFLMPNATLL
Trigger: GAGCAGCGTGGCGTTTGGCATGAGGAAGGCACTGCAGGCTGAGCAGGGGAAGTCAGACATGGAGAGGAAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497858.1
CDS CCA 72 bp GGACATGACATTGCCAGGGTATATACTGCCACCCAGTaGGAGGTCAGTGCCTGGCATGGAGCGTCTACAGCG +
Preference number: 6 (lower is better)
Translates to: GHDIARVYTATQ*EVSAWHGASTA
Trigger: CGCTGTAGACGCTCCATGCCAGGCACTGACCTCCCACTGGGTGGCAGTATATACCCTGGCAATGTCATGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497858.1
CDS CAA 72 bp GCCTCAGGGAGGGTGCCTTCAGTGGCCCAAAGAGCCTaGCCATGCAGTCACTCCTCTGAACTTGGCACTTGT +
Preference number: 6 (lower is better)
Translates to: ASGRVPSVAQRA*PCSHSSELGTC
Trigger: ACAAGTGCCAAGTTCAGAGGAGTGACTGCATGGCAAGGCTCTTTGGGCCACTGAAGGCACCCTCCCTGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497858.1
CDS TCA 72 bp TCCCGGATCAACTCATCTTCCAATGCACACACACCATaGGATCAGACAGGGCGTGGGGAGGGGGCTTGCAGT +
Preference number: 6 (lower is better)
Translates to: SRINSSSNAHTP*DQTGRGEGACS
Trigger: ACTGCAAGCCCCCTCCCCACGCCCTGTCTGATCTCATGGTGTGTGTGCATTGGAAGATGAGTTGATCCGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000467277.1
ENST00000497858.1
CDS TCA 72 bp GGAGGTGGTTTGCAGATCGGCGTCCATAAGAGCCAATaGGACTGGGCTGGGAGACAGCCATTTGACACCAGC +
Preference number: 6 (lower is better)
Translates to: GGGLQIGVHKSQ*DWAGRQPFDTS
Trigger: GCTGGTGTCAAATGGCTGTCTCCCAGCCCAGTCTCATTGGCTCTTATGGACGCCGATCTGCAAACCACCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497858.1
CDS TCA 72 bp TGGCCATCATACTCAACCAGGGGTCCCTCACTGAGGTaGTGCAAGTCCAGGTGTCGTGACTGTCAGCAGAGC +
Preference number: 6 (lower is better)
Translates to: WPSYSTRGPSLR*CKSRCRDCQQS
Trigger: GCTCTGCTGACAGTCACGACACCTGGACTTGCATCACCTCAGTGAGGGACCCCTGGTTGAGTATGATGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497858.1
CDS GCA 72 bp ATTTTCCTCTCCATGTCTGACTTCCCCTGCTCAGCCTaGAGTGCCTTCCTCATGCCAAACGCCACGCTGCTC +
Preference number: 6 (lower is better)
Translates to: IFLSMSDFPCSA*SAFLMPNATLL
Trigger: GAGCAGCGTGGCGTTTGGCATGAGGAAGGCACTGCAGGCTGAGCAGGGGAAGTCAGACATGGAGAGGAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296218.8
ENST00000466723.1
ENST00000467277.1
ENST00000652629.1
CDS GCA 72 bp GTGCCTGGCATGGAGCGTCTACAGCGGAAACAACTCTaGCAAGACCACCAGGCTGGCCATCATACTCAACCA +
Preference number: 6 (lower is better)
Translates to: VPGMERLQRKQL*QDHQAGHHTQP
Trigger: TGGTTGAGTATGATGGCCAGCCTGGTGGTCTTGGCAGAGTTGTTTCCGCTGTAGACGCTCCATGCCAGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497858.1
CDS GCA 72 bp TGCCAGGGTATATACTGCCACCCAGTGGGAGGTCAGTaGCTGGCATGGAGCGTCTACAGCGGAAACAACTCT +
Preference number: 6 (lower is better)
Translates to: CQGIYCHPVGGQ*LAWSVYSGNNS
Trigger: AGAGTTGTTTCCGCTGTAGACGCTCCATGCCAGGCACTGACCTCCCACTGGGTGGCAGTATATACCCTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497858.1
CDS CCA 72 bp GACTGGGTTGGCCAGAGCAAAGGAGACAAGAGGCTCTaGTTTGTTTACAGCACTGGGTCCCCTCCCTTCCTG +
Preference number: 6 (lower is better)
Translates to: DWVGQSKGDKRL*FVYSTGSPPFL
Trigger: CAGGAAGGGAGGGGACCCAGTGCTGTAAACAAACCAGAGCCTCTTGTCTCCTTTGCTCTGGCCAACCCAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497858.1
CDS CCA 72 bp TCTACAGCGGAAACAACTCTGCCAAGACCACCAGGCTaGCCATCATACTCAACCAGGGGTCCCTCACTGAGG +
Preference number: 6 (lower is better)
Translates to: STAETTLPRPPG*PSYSTRGPSLR
Trigger: CCTCAGTGAGGGACCCCTGGTTGAGTATGATGGCCAGCCTGGTGGTCTTGGCAGAGTTGTTTCCGCTGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497858.1
CDS CAA 72 bp TTTGTAGGATCTGGGACACAGGGAGTTGAGGGGAGCTaGGTCTTGGGTGGCTGTGGGGCTGAACCTGAAGGT +
Preference number: 6 (lower is better)
Translates to: FVGSGTQGVEGS*VLGGCGAEPEG
Trigger: ACCTTCAGGTTCAGCCCCACAGCCACCCAAGACCAAGCTCCCCTCAACTCCCTGTGTCCCAGATCCTACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296218.8
ENST00000466723.1
ENST00000490312.1
ENST00000652629.1
CDS CAA 90 bp CTGCAAACACCCTTCCTCTTGGGAAGGACATTAGGGTGTTCTCGCTaGGAGACAAAGTGCAAGGCCTCAGAGAAGGGCCTCAGGGAGGGT +
Preference number: 6 (lower is better)
Translates to: LQTPFLLGRTLGCSR*ETKCKASEKGLREG
Trigger: ACCCTCCCTGAGGCCCTTCTCTGAGGCCTTGCACTTTGTCTCCAAGCGAGAACACCCTAATGTCCTTCCCAAGAGGAAGGGTGTTTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467277.1
ENST00000497858.1
CDS CAA 72 bp CCCTTCCTCTTGGGAAGGACATTAGGGTGTTCTCGCTaGGAGACAAAGTGCAAGGCCTCAGAGAAGGGCCTC +
Preference number: 6 (lower is better)
Translates to: PFLLGRTLGCSR*ETKCKASEKGL
Trigger: GAGGCCCTTCTCTGAGGCCTTGCACTTTGTCTCCAAGCGAGAACACCCTAATGTCCTTCCCAAGAGGAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467277.1
ENST00000497858.1
CDS CAA 90 bp CTTCAGTGGCCCAAAGAGCCTTGCCATGCAGTCACTCCTCTGAACTaGGCACTTGTGAGTAGCACAGTCAGCAAGACTGGGTTGGCCAGA +
Preference number: 6 (lower is better)
Translates to: LQWPKEPCHAVTPLN*ALVSSTVSKTGLAR
Trigger: TCTGGCCAACCCAGTCTTGCTGACTGTGCTACTCACAAGTGCCAAGTTCAGAGGAGTGACTGCATGGCAAGGCTCTTTGGGCCACTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497858.1
CDS TCA 72 bp AGATTGGGTGACAGCATGCAGGAAATGAGGGTAGATTaGGAAGAGGTCTCCCACCACCCTGCCAGGATCCAG +
Preference number: 6 (lower is better)
Translates to: RLGDSMQEMRVD*EEVSHHPARIQ
Trigger: CTGGATCCTGGCAGGGTGGTGGGAGACCTCTTCTCAATCTACCCTCATTTCCTGCATGCTGTCACCCAATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490312.1
CDS TCA 72 bp TCCAGGTCTCTCTTTTCCGTCTCCAATTCTGCGATCTaGGGAGAGAATGCCCAGTCATCCTGGGATGTCGCC +
Preference number: 6 (lower is better)
Translates to: SRSLFSVSNSAI*GENAQSSWDVA
Trigger: GGCGACATCCCAGGATGACTGGGCATTCTCTCCTCAGATCGCAGAATTGGAGACGGAAAAGAGAGACCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497858.1
CDS GCA 72 bp GTTGATGGTGACCTCCCGGATCAACTCATCTTCCAATaGACACACACCATGAGATCAGACAGGGCGTGGGGA +
Preference number: 6 (lower is better)
Translates to: VDGDLPDQLIFQ*THTMRSDRAWG
Trigger: TCCCCACGCCCTGTCTGATCTCATGGTGTGTGTGCATTGGAAGATGAGTTGATCCGGGAGGTCACCATCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467277.1
ENST00000497858.1
CDS CCA 72 bp TTCCAATGCACACACACCATGAGATCAGACAGGGCGTaGGGAGGGGGCTTGCAGTATGTCTACTGCAAACAC +
Preference number: 6 (lower is better)
Translates to: FQCTHTMRSDRA*GGGLQYVYCKH
Trigger: GTGTTTGCAGTAGACATACTGCAAGCCCCCTCCCCACGCCCTGTCTGATCTCATGGTGTGTGTGCATTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000467277.1
ENST00000497858.1
CDS CCA 72 bp GGAACTCAAGTTGCCAAGAATATAGTGGTTGGCAGCTaGAGGACTTGTAGAAGAGGCGGGGCTGGTGTAGGG +
Preference number: 6 (lower is better)
Translates to: GTQVAKNIVVGS*RTCRRGGAGVG
Trigger: CCCTACACCAGCCCCGCCTCTTCTACAAGTCCTCCAGCTGCCAACCACTATATTCTTGGCAACTTGAGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497858.1
CDS CAA 90 bp GTGGGGAGGGGGCTTGCAGTATGTCTACTGCAAACACCCTTCCTCTaGGGAAGGACATTAGGGTGTTCTCGCTTGGAGACAAAGTGCAAG +
Preference number: 6 (lower is better)
Translates to: VGRGLAVCLLQTPFL*GRTLGCSRLETKCK
Trigger: CTTGCACTTTGTCTCCAAGCGAGAACACCCTAATGTCCTTCCCAAGAGGAAGGGTGTTTGCAGTAGACATACTGCAAGCCCCCTCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000467277.1
ENST00000497858.1
CDS GCA 72 bp CATAATAACACACGGATAGGGAAGCCTGCTAGACCCTaGAGCTGCCTGAGGGTTTGGAGGTGGTTTGCAGAT +
Preference number: 6 (lower is better)
Translates to: HNNTRIGKPARP*SCLRVWRWFAD
Trigger: ATCTGCAAACCACCTCCAAACCCTCAGGCAGCTGCAGGGTCTAGCAGGCTTCCCTATCCGTGTGTTATTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497858.1
CDS GCA 72 bp CTTTTCCGTCTCCAATTCTGCGATCTGAGGAGAGAATaGCCAGTCATCCTGGGATGTCGCCAGGTGAATGGA +
Preference number: 6 (lower is better)
Translates to: LFRLQFCDLRRE*PVILGCRQVNG
Trigger: TCCATTCACCTGGCGACATCCCAGGATGACTGGGCATTCTCTCCTCAGATCGCAGAATTGGAGACGGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497858.1
CDS CAA 72 bp TTGGCACTTGTGAGTAGCACAGTCAGCAAGACTGGGTaGGCCAGAGCAAAGGAGACAAGAGGCTCTGGTTTG +
Preference number: 6 (lower is better)
Translates to: LALVSSTVSKTG*ARAKETRGSGL
Trigger: CAAACCAGAGCCTCTTGTCTCCTTTGCTCTGGCCAACCCAGTCTTGCTGACTGTGCTACTCACAAGTGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497858.1
CDS CAA 90 bp TCGGCGTCCATAAGAGCCAATGAGACTGGGCTGGGAGACAGCCATTaGACACCAGCACTCAAGGAGGTGCATCTTAAATCTCTCGTGTCT +
Preference number: 6 (lower is better)
Translates to: SASIRANETGLGDSH*TPALKEVHLKSLVS
Trigger: AGACACGAGAGATTTAAGATGCACCTCCTTGAGTGCTGGTGTCAAATGGCTGTCTCCCAGCCCAGTCTCATTGGCTCTTATGGACGCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497858.1
CDS CAA 90 bp CCTCTGAACTTGGCACTTGTGAGTAGCACAGTCAGCAAGACTGGGTaGGCCAGAGCAAAGGAGACAAGAGGCTCTGGTTTGTTTACAGCA +
Preference number: 6 (lower is better)
Translates to: PLNLALVSSTVSKTG*ARAKETRGSGLFTA
Trigger: TGCTGTAAACAAACCAGAGCCTCTTGTCTCCTTTGCTCTGGCCAACCCAGTCTTGCTGACTGTGCTACTCACAAGTGCCAAGTTCAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497858.1
CDS GCA 72 bp CTTGGGGGTAGTATGGCATTCAAGATTTCTTCTGCCTaGTTTGTAGGATCTGGGACACAGGGAGTTGAGGGG +
Preference number: 6 (lower is better)
Translates to: LGGSMAFKISSA*FVGSGTQGVEG
Trigger: CCCCTCAACTCCCTGTGTCCCAGATCCTACAAAGCAGGCAGAAGAAATCTTGAATGCCATACTACCCCCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296218.8
ENST00000466723.1
ENST00000490312.1
ENST00000652629.1
CDS CCA 72 bp CAAAGGAGACAAGAGGCTCTGGTTTGTTTACAGCACTaGGTCCCCTCCCTTCCTGCCTTAGGTAAAAACTGG +
Preference number: 6 (lower is better)
Translates to: QRRQEALVCLQH*VPSLPALGKNW
Trigger: CCAGTTTTTACCTAAGGCAGGAAGGGAGGGGACCCAGTGCTGTAAACAAACCAGAGCCTCTTGTCTCCTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497858.1
CDS CAA 72 bp GGGCTTGCAGTATGTCTACTGCAAACACCCTTCCTCTaGGGAAGGACATTAGGGTGTTCTCGCTTGGAGACA +
Preference number: 6 (lower is better)
Translates to: GLAVCLLQTPFL*GRTLGCSRLET
Trigger: TGTCTCCAAGCGAGAACACCCTAATGTCCTTCCCAAGAGGAAGGGTGTTTGCAGTAGACATACTGCAAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467277.1
ENST00000497858.1
CDS TCA 72 bp TCAGAATGTAGTGCTGGAATGATAAGCATGTGGCCCTaGGGTTTACAGAAGAGATGGGACCAAGGGTCACGG +
Preference number: 6 (lower is better)
Translates to: SECSAGMISMWP*GLQKRWDQGSR
Trigger: CCGTGACCCTTGGTCCCATCTCTTCTGTAAACCTCAGGGCCACATGCTTATCATTCCAGCACTACATTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497858.1
CDS CAA 72 bp CTCAGTGGCTTCACATTTTGCCTTCTGCTCGTTCACTaGCCTCTCCAGGTCTCTCTTTTCCGTCTCCAATTC +
Preference number: 6 (lower is better)
Translates to: LSGFTFCLLLVH*PLQVSLFRLQF
Trigger: GAATTGGAGACGGAAAAGAGAGACCTGGAGAGGCAAGTGAACGAGCAGAAGGCAAAATGTGAAGCCACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296218.8
ENST00000466723.1
ENST00000467277.1
ENST00000497858.1
ENST00000652629.1
CDS CAA 72 bp AGGCCTTCTCCCAGCCACTGCTCCTACTTTCTTACCTaGGGGGTAGTATGGCATTCAAGATTTCTTCTGCCT +
Preference number: 6 (lower is better)
Translates to: RPSPSHCSYFLT*GVVWHSRFLLP
Trigger: AGGCAGAAGAAATCTTGAATGCCATACTACCCCCAAGGTAAGAAAGTAGGAGCAGTGGCTGGGAGAAGGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490312.1
CDS GCA 72 bp TCAGTGGCTTCACATTTTGCCTTCTGCTCGTTCACTTaGCTCTCCAGGTCTCTCTTTTCCGTCTCCAATTCT +
Preference number: 6 (lower is better)
Translates to: SVASHFAFCSFT*LSRSLFSVSNS
Trigger: AGAATTGGAGACGGAAAAGAGAGACCTGGAGAGGCAAGTGAACGAGCAGAAGGCAAAATGTGAAGCCACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296218.8
ENST00000466723.1
ENST00000467277.1
ENST00000497858.1
ENST00000652629.1
CDS CAA 72 bp ATAAGAGCCAATGAGACTGGGCTGGGAGACAGCCATTaGACACCAGCACTCAAGGAGGTGCATCTTAAATCT +
Preference number: 6 (lower is better)
Translates to: IRANETGLGDSH*TPALKEVHLKS
Trigger: AGATTTAAGATGCACCTCCTTGAGTGCTGGTGTCAAATGGCTGTCTCCCAGCCCAGTCTCATTGGCTCTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497858.1
CDS TCA 72 bp GAAGTTATCGTTTTACTCCAAACATCTGCTAAGGGGTaGGGAACTCAAGTTGCCAAGAATATAGTGGTTGGC +
Preference number: 6 (lower is better)
Translates to: EVIVLLQTSAKG*GTQVAKNIVVG
Trigger: GCCAACCACTATATTCTTGGCAACTTGAGTTCCTCACCCCTTAGCAGATGTTTGGAGTAAAACGATAACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497858.1
CDS CCA 72 bp ATGAAGATAATGAGGAAGCAGAAGACTATATGGTCCTaGAGTTTAGTGGAGAAGACAGGGCTGGAAATACAC +
Preference number: 6 (lower is better)
Translates to: MKIMRKQKTIWS*SLVEKTGLEIH
Trigger: GTGTATTTCCAGCCCTGTCTTCTCCACTAAACTCCAGGACCATATAGTCTTCTGCTTCCTCATTATCTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490312.1
CDS TCA 72 bp AAAGAAGGAGAGATCAGACTGTTACTGTGTCTACGTTaGAAAGAAAGACACAAGAAACTCCATTTTGACCTG +
Preference number: 6 (lower is better)
Translates to: KEGEIRLLLCLR*KERHKKLHFDL
Trigger: CAGGTCAAAATGGAGTTTCTTGTGTCTTTCTTTTCAACGTAGACACAGTAACAGTCTGATCTCTCCTTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497858.1