RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DNAJC9 (Homo sapiens)

Ensembl gene IDs: ENSG00000213551

Ensembl transcript IDs: ENST00000372950.6, ENST00000453189.2, ENST00000469143.1

Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp TATAAAAGGGAACAGATTCAGACAAGCTCAGTGGCCCAACTGAAGACATTCAGCGACTTCAGTAATCAGTaGCAGGACTACAACATACAT +
Preference number: 2 (lower is better)
Translates to: YKREQIQTSSVAQLKTFSDFSNQ*QDYNIH
Trigger: ATGTATGTTGTAGTCCTGCCACTGATTACTGAAGTC...GCTGAATGTCTTCAGTTGGGCCACTGAGCTTGTCTGAATCTGTTCCCTTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372950.6
3UTR TCA 72 bp AAAGGGAACAGATTCAGACAAGCTCAGTGGCCCAACTaGAGACATTCAGCAATTAATGGCAGGACTTCAGTA +
Preference number: 3 (lower is better)
Translates to: KGNRFRQAQWPN*RHSAINGRTSV
Trigger: TACTGAAGTCCTGCCATTAATTGCTGAATGTCTTCAGTTGGGCCACTGAGCTTGTCTGAATCTGTTCCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372950.6
CDS-3UTR GCA 90 bp TATAAAAGGGAACAGATTCAGACAAGCTCAGTGGCCCAACTGAAGACATTCAGCGCAGCCGCTCCCAGCTaGGCCGGGTACAACCCAGGA +
Preference number: 4 (lower is better)
Translates to: YKREQIQTSSVAQLKTFSAAAPS*AGYNPG
Trigger: TCCTGGGTTGTACCCGGCGCAGCTGGGAGCGGCTGC...GCTGAATGTCTTCAGTTGGGCCACTGAGCTTGTCTGAATCTGTTCCCTTTTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372950.6
CDS-3UTR GCA 90 bp TATAAAAGGGAACAGATTCAGACAAGCTCAGTGGCCCAACTGAAGACATTCAGCGGTCCAGCAGCCCCATaGCGGGCGGAGATACGACCC +
Preference number: 4 (lower is better)
Translates to: YKREQIQTSSVAQLKTFSGPAAP*RAEIRP
Trigger: GGGTCGTATCTCCGCCCGGCATGGGGCTGCTGGACC...GCTGAATGTCTTCAGTTGGGCCACTGAGCTTGTCTGAATCTGTTCCCTTTTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372950.6
CDS-3UTR CCA 90 bp TATAAAAGGGAACAGATTCAGACAAGCTCAGTGGCCCAACTGAAGACATTCAGCACTTTTCCCAGGATCTaGAAGCGGCGGGTGGCGTCC +
Preference number: 4 (lower is better)
Translates to: YKREQIQTSSVAQLKTFSTFPRI*KRRVAS
Trigger: GGACGCCACCCGCCGCTTCCAGATCCTGGGAAAAGT...GCTGAATGTCTTCAGTTGGGCCACTGAGCTTGTCTGAATCTGTTCCCTTTTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372950.6
CDS-3UTR TCA 90 bp TATAAAAGGGAACAGATTCAGACAAGCTCAGTGGCCCAACTGAAGACATTCAGCAGTCTCGGTCTTGGGTaGGCACAGGAGAGTCCTCGT +
Preference number: 4 (lower is better)
Translates to: YKREQIQTSSVAQLKTFSSLGLG*AQESPR
Trigger: ACGAGGACTCTCCTGTGCTCACCCAAGACCGAGACT...GCTGAATGTCTTCAGTTGGGCCACTGAGCTTGTCTGAATCTGTTCCCTTTTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372950.6
CDS-3UTR GCA 90 bp TATAAAAGGGAACAGATTCAGACAAGCTCAGTGGCCCAACTGAAGACATTCAGCGGTAAAGGTCGGCGGTaGCGAACACTTCCTCGCAAA +
Preference number: 4 (lower is better)
Translates to: YKREQIQTSSVAQLKTFSGKGRR*RTLPRK
Trigger: TTTGCGAGGAAGTGTTCGGCACCGCCGACCTTTACC...GCTGAATGTCTTCAGTTGGGCCACTGAGCTTGTCTGAATCTGTTCCCTTTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372950.6
CDS-3UTR GCA 90 bp TATAAAAGGGAACAGATTCAGACAAGCTCAGTGGCCCAACTGAAGACATTCAGCCTGCTCATCGTACACTaGTCTCTGTTCTCTGTCACT +
Preference number: 4 (lower is better)
Translates to: YKREQIQTSSVAQLKTFSLLIVH*SLFSVT
Trigger: AGTGACAGAGAACAGAGAGCAGTGTACGATGAGCAG...GCTGAATGTCTTCAGTTGGGCCACTGAGCTTGTCTGAATCTGTTCCCTTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372950.6
CDS-3UTR TCA 90 bp TATAAAAGGGAACAGATTCAGACAAGCTCAGTGGCCCAACTGAAGACATTCAGCGCTCAGTGGCCCAACTaGAGACATTCAGCAATTAAT +
Preference number: 4 (lower is better)
Translates to: YKREQIQTSSVAQLKTFSAQWPN*RHSAIN
Trigger: ATTAATTGCTGAATGTCTTCAGTTGGGCCACTGAGC...GCTGAATGTCTTCAGTTGGGCCACTGAGCTTGTCTGAATCTGTTCCCTTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372950.6
CDS-3UTR TCA 90 bp TATAAAAGGGAACAGATTCAGACAAGCTCAGTGGCCCAACTGAAGACATTCAGCTCTGTTCTCTGTCACTaGGAACGGAATAGACTTTTC +
Preference number: 4 (lower is better)
Translates to: YKREQIQTSSVAQLKTFSSVLCH*ERNRLF
Trigger: GAAAAGTCTATTCCGTTCTCAGTGACAGAGAACAGA...GCTGAATGTCTTCAGTTGGGCCACTGAGCTTGTCTGAATCTGTTCCCTTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372950.6
CDS GCA 90 bp GGTCGGCGGTGCCGAACACTTCCTCGCAAAGGTCCAGCAGCCCCATaGCGGGCGGAGATACGACCCCGGAGGAAGCAGCCGCTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: GRRCRTLPRKGPAAP*RAEIRPRRKQPLPA
Trigger: AGCTGGGAGCGGCTGCTTCCTCCGGGGTCGTATCTCCGCCCGGCATGGGGCTGCTGGACCTTTGCGAGGAAGTGTTCGGCACCGCCGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372950.6
CDS GCA 90 bp TCTCGGTCTTGGGTGAGCACAGGAGAGTCCTCGTCCACTGTTCCCTaGTCATCGTACACTGCTCTCTGTTCTCTGTCACTGAGAACGGAA +
Preference number: 5 (lower is better)
Translates to: SRSWVSTGESSSTVP*SSYTALCSLSLRTE
Trigger: TTCCGTTCTCAGTGACAGAGAACAGAGAGCAGTGTACGATGAGCAGGGAACAGTGGACGAGGACTCTCCTGTGCTCACCCAAGACCGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372950.6
CDS GCA 72 bp TGCCGAACACTTCCTCGCAAAGGTCCAGCAGCCCCATaGCGGGCGGAGATACGACCCCGGAGGAAGCAGCCG +
Preference number: 6 (lower is better)
Translates to: CRTLPRKGPAAP*RAEIRPRRKQP
Trigger: CGGCTGCTTCCTCCGGGGTCGTATCTCCGCCCGGCATGGGGCTGCTGGACCTTTGCGAGGAAGTGTTCGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372950.6
CDS TCA 72 bp GTAGCTGGATACACAGTATCGTCGCTCATGTGCAGTTaGGTATCCTCATCAGGCCCGACCTGGCAGGGGATC +
Preference number: 6 (lower is better)
Translates to: VAGYTVSSLMCS*VSSSGPTWQGI
Trigger: GATCCCCTGCCAGGTCGGGCCTGATGAGGATACTCAACTGCACATGAGCGACGATACTGTGTATCCAGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453189.2
CDS GCA 72 bp TGGGTGAGCACAGGAGAGTCCTCGTCCACTGTTCCCTaGTCATCGTACACTGCTCTCTGTTCTCTGTCACTG +
Preference number: 6 (lower is better)
Translates to: WVSTGESSSTVP*SSYTALCSLSL
Trigger: CAGTGACAGAGAACAGAGAGCAGTGTACGATGAGCAGGGAACAGTGGACGAGGACTCTCCTGTGCTCACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372950.6
CDS CAA 72 bp TGTAGCTGGATACACAGTATCGTCGCTCATGTGCAGTaGAGTATCCTCATCAGGCCCGACCTGGCAGGGGAT +
Preference number: 6 (lower is better)
Translates to: CSWIHSIVAHVQ*SILIRPDLAGD
Trigger: ATCCCCTGCCAGGTCGGGCCTGATGAGGATACTCAACTGCACATGAGCGACGATACTGTGTATCCAGCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453189.2
CDS CAA 90 bp CTTTTGTCTTGTAGCTGGATACACAGTATCGTCGCTCATGTGCAGTaGAGTATCCTCATCAGGCCCGACCTGGCAGGGGATCTGATGCCA +
Preference number: 6 (lower is better)
Translates to: LLSCSWIHSIVAHVQ*SILIRPDLAGDLMP
Trigger: TGGCATCAGATCCCCTGCCAGGTCGGGCCTGATGAGGATACTCAACTGCACATGAGCGACGATACTGTGTATCCAGCTACAAGACAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453189.2
CDS GCA 72 bp AGAGTCCTCGTCCACTGTTCCCTGCTCATCGTACACTaGTCTCTGTTCTCTGTCACTGAGAACGGAATAGAC +
Preference number: 6 (lower is better)
Translates to: RVLVHCSLLIVH*SLFSVTENGID
Trigger: GTCTATTCCGTTCTCAGTGACAGAGAACAGAGAGCAGTGTACGATGAGCAGGGAACAGTGGACGAGGACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372950.6
CDS CAA 72 bp AATGGCTTTGTGGGCATCTGGCTTGGGATTTTCTACTaGAAATTCAACCCAGTGCACTCAGCTGACTTTTCC +
Preference number: 6 (lower is better)
Translates to: NGFVGIWLGIFY*KFNPVHSADFS
Trigger: GGAAAAGTCAGCTGAGTGCACTGGGTTGAATTTCAAGTAGAAAATCCCAAGCCAGATGCCCACAAAGCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453189.2
CDS CAA 90 bp TTTACAATAAATGGCTTTGTGGGCATCTGGCTTGGGATTTTCTACTaGAAATTCAACCCAGTGCACTCAGCTGACTTTTCCCTCAAGTTG +
Preference number: 6 (lower is better)
Translates to: FTINGFVGIWLGIFY*KFNPVHSADFSLKL
Trigger: CAACTTGAGGGAAAAGTCAGCTGAGTGCACTGGGTTGAATTTCAAGTAGAAAATCCCAAGCCAGATGCCCACAAAGCCATTTATTGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453189.2
CDS CAA 72 bp CTTCTCAATTCAGTTCATAATAAGGTCAGCAGAGTCTaGATGCTAAAACCTGAATGGCTGCCTTCAGGCTAT +
Preference number: 6 (lower is better)
Translates to: LLNSVHNKVSRV*MLKPEWLPSGY
Trigger: ATAGCCTGAAGGCAGCCATTCAGGTTTTAGCATCAAGACTCTGCTGACCTTATTATGAACTGAATTGAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469143.1
CDS TCA 72 bp TCCCTCAAGTTGGTAGTCTATGCCTTTTACCACTGTTaGTTTCAAGGTGTTCCTGTGAACCTGCTAAAATAT +
Preference number: 6 (lower is better)
Translates to: SLKLVVYAFYHC*FQGVPVNLLKY
Trigger: ATATTTTAGCAGGTTCACAGGAACACCTTGAAATCAACAGTGGTAAAAGGCATAGACTACCAACTTGAGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453189.2
CDS TCA 72 bp AAACAGTTCTCACACAGAGAAAGCTCTAGGCCCAGGTaGATTCTCTCATCCATTTGTGGAAGAAATAACAAT +
Preference number: 6 (lower is better)
Translates to: KQFSHRESSRPR*ILSSICGRNNN
Trigger: ATTGTTATTTCTTCCACAAATGGATGAGAGAATTCACCTGGGCCTAGAGCTTTCTCTGTGTGAGAACTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469143.1
CDS CCA 72 bp AATTTTTACAATAAATGGCTTTGTGGGCATCTGGCTTaGGATTTTCTACTTGAAATTCAACCCAGTGCACTC +
Preference number: 6 (lower is better)
Translates to: NFYNKWLCGHLA*DFLLEIQPSAL
Trigger: GAGTGCACTGGGTTGAATTTCAAGTAGAAAATCCCAAGCCAGATGCCCACAAAGCCATTTATTGTAAAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453189.2