RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DNAJC5G (Homo sapiens)

Ensembl gene IDs: ENSG00000163793

Ensembl transcript IDs: ENST00000296097.8, ENST00000402462.5, ENST00000404433.5, ENST00000406962.1, ENST00000420191.5, ENST00000460358.1

Found 282 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCCAGGGACAGGATCCACCCTGCTCAGTTATCAGGCTCTTGGTGGTaGTATCGCAAGGGGCTCAGGGATCCTACCAGCTGGCATTGGTTC +
Preference number: 1 (lower is better)
Translates to: SRDRIHPAQLSGSWW*YRKGLRDPTSWHWF
Trigger: GAACCAATGCCAGCTGGTAGGATCCCTGAGCCCCTTGCGATATCACCACCAAGAGCCTGATAACTGAGCAGGGTGGATCCTGTCCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR TCA 90 bp CATGGAATGAGGCTGGCAATGCCAATGGCCGTGGGCACCAGAAGATaGAACCAACTCCATACAGGCGTTATTGGCTTAGGAATGAGGCTG +
Preference number: 1 (lower is better)
Translates to: HGMRLAMPMAVGTRR*NQLHTGVIGLGMRL
Trigger: CAGCCTCATTCCTAAGCCAATAACGCCTGTATGGAGTTGGTTTCATCTTCTGGTGCCCACGGCCATTGGCATTGCCAGCCTCATTCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR GCA 90 bp GGCTTAGGAATGAGGCTGATGCTAGGGGTTCTTGGTACACAGAGTTaGAACAAGGGAGAATTAATGGGTGCAGCAGCTCCAGGGACAGGA +
Preference number: 1 (lower is better)
Translates to: GLGMRLMLGVLGTQS*NKGELMGAAAPGTG
Trigger: TCCTGTCCCTGGAGCTGCTGCACCCATTAATTCTCCCTTGTTGCAACTCTGTGTACCAAGAACCCCTAGCATCAGCCTCATTCCTAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR CCA 90 bp GGCCGTGGGCACCAGAAGATGAAACCAACTCCATACAGGCGTTATTaGCTTAGGAATGAGGCTGATGCTAGGGGTTCTTGGTACACAGAG +
Preference number: 1 (lower is better)
Translates to: GRGHQKMKPTPYRRY*LRNEADARGSWYTE
Trigger: CTCTGTGTACCAAGAACCCCTAGCATCAGCCTCATTCCTAAGCCAATAACGCCTGTATGGAGTTGGTTTCATCTTCTGGTGCCCACGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR CCA 90 bp GTCCAGGGAGAGAAGTTTGAGGAATTAGTAGGCTGTGACCCTGAGTaGGTGGGAAATACACGGTGTGAGGAGGATACGAAACAGCAGCAC +
Preference number: 1 (lower is better)
Translates to: VQGEKFEELVGCDPE*VGNTRCEEDTKQQH
Trigger: GTGCTGCTGTTTCGTATCCTCCTCACACCGTGTATTTCCCACCCACTCAGGGTCACAGCCTACTAATTCCTCAAACTTCTCTCCCTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR TCA 90 bp AAATGCACTCGCAGTTTTCCTGAGTTGACTCATAGTGGCATGGAATaGGGCTGGCAATGCCAATGGCCGTGGGCACCAGAAGATGAAACC +
Preference number: 1 (lower is better)
Translates to: KCTRSFPELTHSGME*GWQCQWPWAPEDET
Trigger: GGTTTCATCTTCTGGTGCCCACGGCCATTGGCATTGCCAGCCTCATTCCATGCCACTATGAGTCAACTCAGGAAAACTGCGAGTGCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR CCA 90 bp TACAGGCGTTATTGGCTTAGGAATGAGGCTGATGCTAGGGGTTCTTaGTACACAGAGTTGCAACAAGGGAGAATTAATGGGTGCAGCAGC +
Preference number: 1 (lower is better)
Translates to: YRRYWLRNEADARGS*YTELQQGRINGCSS
Trigger: GCTGCTGCACCCATTAATTCTCCCTTGTTGCAACTCTGTGTACCAAGAACCCCTAGCATCAGCCTCATTCCTAAGCCAATAACGCCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR CCA 90 bp CACGGTGTGAGGAGGATACGAAACAGCAGCACAAAGAGGCAAGAGTaGGAAAAGAGTCCAGAAAGTACAATCTTTTCCAGATCACATATT +
Preference number: 1 (lower is better)
Translates to: HGVRRIRNSSTKRQE*EKSPESTIFSRSHI
Trigger: AATATGTGATCTGGAAAAGATTGTACTTTCTGGACTCTTTTCCCACTCTTGCCTCTTTGTGCTGCTGTTTCGTATCCTCCTCACACCGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR CAA 90 bp CAGCAGCTCCAGGGACAGGATCCACCCTGCTCAGTTATCAGGCTCTaGGTGGTGATATCGCAAGGGGCTCAGGGATCCTACCAGCTGGCA +
Preference number: 2 (lower is better)
Translates to: QQLQGQDPPCSVIRL*VVISQGAQGSYQLA
Trigger: TGCCAGCTGGTAGGATCCCTGAGCCCCTTGCGATATCACCACCAAGAGCCTGATAACTGAGCAGGGTGGATCCTGTCCCTGGAGCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR-3UTR TCA 90 bp AATGGGTGCAGCAGCTCCAGGGACAGGATCCACCCTGCTCAGTTATCAGGCTCTTCTGCCACCACTGCCTaGGACCTCATAAGGGGAGGG +
Preference number: 2 (lower is better)
Translates to: NGCSSSRDRIHPAQLSGSSATTA*DLIRGG
Trigger: CCCTCCCCTTATGAGGTCTCAGGCAGTGGTGGCAGA...AGAGCCTGATAACTGAGCAGGGTGGATCCTGTCCCTGGAGCTGCTGCACCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR-3UTR CCA 90 bp CAAGGGAGAATTAATGGGTGCAGCAGCTCCAGGGACAGGATCCACCCTGCTCAGAGAAGGCACCCTCACTaGGTCAGCACCTCATCCTTC +
Preference number: 2 (lower is better)
Translates to: QGRINGCSSSRDRIHPAQRRHPH*VSTSSF
Trigger: GAAGGATGAGGTGCTGACCCAGTGAGGGTGCCTTCT...CTGAGCAGGGTGGATCCTGTCCCTGGAGCTGCTGCACCCATTAATTCTCCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR-3UTR TCA 90 bp GCTCAGGGATCCTACCAGCTGGCATTGGTTCCAATAACAAGGCAGACACAGGAATCTGCCACCACTGCCTaGGACCTCATAAGGGGAGGG +
Preference number: 2 (lower is better)
Translates to: AQGSYQLALVPITRQTQESATTA*DLIRGG
Trigger: CCCTCCCCTTATGAGGTCTCAGGCAGTGGTGGCAGA...TTCCTGTGTCTGCCTTGTTATTGGAACCAATGCCAGCTGGTAGGATCCCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR-3UTR CCA 90 bp CCATACAGGCGTTATTGGCTTAGGAATGAGGCTGATGCTAGGGGTTCTTGGTACATGTGTCCAGGGGACTaGGCAGCAGAAGGCACCCTC +
Preference number: 2 (lower is better)
Translates to: PYRRYWLRNEADARGSWYMCPGD*AAEGTL
Trigger: GAGGGTGCCTTCTGCTGCCCAGTCCCCTGGACACAT...GTACCAAGAACCCCTAGCATCAGCCTCATTCCTAAGCCAATAACGCCTGTATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR CAA 90 bp ATAAGAAGAGGGGTCAAATCAGGGTCAATGTCAGGACAGGGCTACTaGCTCCTCTCTTCAATGTGTCCAGGGGACTGGGCAGCAGAAGGC +
Preference number: 2 (lower is better)
Translates to: IRRGVKSGSMSGQGY*LLSSMCPGDWAAEG
Trigger: GCCTTCTGCTGCCCAGTCCCCTGGACACATTGAAGAGAGGAGCAAGTAGCCCTGTCCTGACATTGACCCTGATTTGACCCCTCTTCTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR-3UTR TCA 90 bp TGGCTTAGGAATGAGGCTGATGCTAGGGGTTCTTGGTACACAGAGTTGCAACAATCTGCCACCACTGCCTaGGACCTCATAAGGGGAGGG +
Preference number: 2 (lower is better)
Translates to: WLRNEADARGSWYTELQQSATTA*DLIRGG
Trigger: CCCTCCCCTTATGAGGTCTCAGGCAGTGGTGGCAGA...TTGTTGCAACTCTGTGTACCAAGAACCCCTAGCATCAGCCTCATTCCTAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR-3UTR CCA 90 bp GCTCAGGGATCCTACCAGCTGGCATTGGTTCCAATAACAAGGCAGACACAGGAAAGAAGGCACCCTCACTaGGTCAGCACCTCATCCTTC +
Preference number: 2 (lower is better)
Translates to: AQGSYQLALVPITRQTQERRHPH*VSTSSF
Trigger: GAAGGATGAGGTGCTGACCCAGTGAGGGTGCCTTCT...TTCCTGTGTCTGCCTTGTTATTGGAACCAATGCCAGCTGGTAGGATCCCTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR-3UTR CCA 90 bp GTTATTGGCTTAGGAATGAGGCTGATGCTAGGGGTTCTTGGTACACAGAGTTGCATGTGTCCAGGGGACTaGGCAGCAGAAGGCACCCTC +
Preference number: 2 (lower is better)
Translates to: VIGLGMRLMLGVLGTQSCMCPGD*AAEGTL
Trigger: GAGGGTGCCTTCTGCTGCCCAGTCCCCTGGACACAT...GCAACTCTGTGTACCAAGAACCCCTAGCATCAGCCTCATTCCTAAGCCAATAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR CAA 90 bp TGGCTTAGGAATGAGGCTGATGCTAGGGGTTCTTGGTACACAGAGTaGCAACAAGGGAGAATTAATGGGTGCAGCAGCTCCAGGGACAGG +
Preference number: 2 (lower is better)
Translates to: WLRNEADARGSWYTE*QQGRINGCSSSRDR
Trigger: CCTGTCCCTGGAGCTGCTGCACCCATTAATTCTCCCTTGTTGCAACTCTGTGTACCAAGAACCCCTAGCATCAGCCTCATTCCTAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR-3UTR TCA 90 bp GAATTAGTAGGCTGTGACCCTGAGTGGGTGGGAAATACACGGTGTGAGGAGGATGTGGGCACCAGAAGATaGAACCAACTCCATACAGGC +
Preference number: 2 (lower is better)
Translates to: ELVGCDPEWVGNTRCEEDVGTRR*NQLHTG
Trigger: GCCTGTATGGAGTTGGTTTCATCTTCTGGTGCCCAC...ATCCTCCTCACACCGTGTATTTCCCACCCACTCAGGGTCACAGCCTACTAATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR-3UTR GCA 90 bp CTGAGTGGGTGGGAAATACACGGTGTGAGGAGGATACGAAACAGCAGCACAAAGGGACAGGATCCACCCTaGTCAGTTATCAGGCTCTTG +
Preference number: 2 (lower is better)
Translates to: LSGWEIHGVRRIRNSSTKGQDPP*SVIRLL
Trigger: CAAGAGCCTGATAACTGAGCAGGGTGGATCCTGTCC...CTTTGTGCTGCTGTTTCGTATCCTCCTCACACCGTGTATTTCCCACCCACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR-3UTR CCA 90 bp CCATACAGGCGTTATTGGCTTAGGAATGAGGCTGATGCTAGGGGTTCTTGGTACAGAAGGCACCCTCACTaGGTCAGCACCTCATCCTTC +
Preference number: 2 (lower is better)
Translates to: PYRRYWLRNEADARGSWYRRHPH*VSTSSF
Trigger: GAAGGATGAGGTGCTGACCCAGTGAGGGTGCCTTCT...GTACCAAGAACCCCTAGCATCAGCCTCATTCCTAAGCCAATAACGCCTGTATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR-3UTR CCA 90 bp AGTGGGTGGGAAATACACGGTGTGAGGAGGATACGAAACAGCAGCACAAAGAGGCAATGCCAATGGCCGTaGGCACCAGAAGATGAAACC +
Preference number: 2 (lower is better)
Translates to: SGWEIHGVRRIRNSSTKRQCQWP*APEDET
Trigger: GGTTTCATCTTCTGGTGCCCACGGCCATTGGCATTG...CCTCTTTGTGCTGCTGTTTCGTATCCTCCTCACACCGTGTATTTCCCACCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR-3UTR TCA 90 bp CCATACAGGCGTTATTGGCTTAGGAATGAGGCTGATGCTAGGGGTTCTTGGTACGGGAGGGCTGCTTTCTaGCGGAGTAAAATTGGGACT +
Preference number: 2 (lower is better)
Translates to: PYRRYWLRNEADARGSWYGRAAF*RSKIGT
Trigger: AGTCCCAATTTTACTCCGTCAGAAAGCAGCCCTCCC...GTACCAAGAACCCCTAGCATCAGCCTCATTCCTAAGCCAATAACGCCTGTATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR-3UTR TCA 90 bp CTACCCCTAAGCCTCAAATGCACTCGCAGTTTTCCTGAGTTGACTCATAGTGGCGTGGGCACCAGAAGATaGAACCAACTCCATACAGGC +
Preference number: 2 (lower is better)
Translates to: LPLSLKCTRSFPELTHSGVGTRR*NQLHTG
Trigger: GCCTGTATGGAGTTGGTTTCATCTTCTGGTGCCCAC...GCCACTATGAGTCAACTCAGGAAAACTGCGAGTGCATTTGAGGCTTAGGGGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR CAA 90 bp TTGGTGGTGATATCGCAAGGGGCTCAGGGATCCTACCAGCTGGCATaGGTTCCAATAACAAGGCAGACACAGGAAAAAGACTCTTCAGGA +
Preference number: 2 (lower is better)
Translates to: LVVISQGAQGSYQLA*VPITRQTQEKDSSG
Trigger: TCCTGAAGAGTCTTTTTCCTGTGTCTGCCTTGTTATTGGAACCAATGCCAGCTGGTAGGATCCCTGAGCCCCTTGCGATATCACCACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR-3UTR TCA 90 bp GTTATTGGCTTAGGAATGAGGCTGATGCTAGGGGTTCTTGGTACACAGAGTTGCGGGAGGGCTGCTTTCTaGCGGAGTAAAATTGGGACT +
Preference number: 2 (lower is better)
Translates to: VIGLGMRLMLGVLGTQSCGRAAF*RSKIGT
Trigger: AGTCCCAATTTTACTCCGTCAGAAAGCAGCCCTCCC...GCAACTCTGTGTACCAAGAACCCCTAGCATCAGCCTCATTCCTAAGCCAATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR-3UTR GCA 90 bp AGGGGAGGGCTGCTTTCTGACGGAGTAAAATTGGGACTGCAACTGAAAGGAAGACAGGACAGGGCTACTTaGTCCTCTCTTCAATGTGTC +
Preference number: 2 (lower is better)
Translates to: RGGLLSDGVKLGLQLKGRQDRAT*SSLQCV
Trigger: GACACATTGAAGAGAGGAGCAAGTAGCCCTGTCCTG...TCTTCCTTTCAGTTGCAGTCCCAATTTTACTCCGTCAGAAAGCAGCCCTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR-3UTR GCA 90 bp GGCGTTATTGGCTTAGGAATGAGGCTGATGCTAGGGGTTCTTGGTACACAGAGTAAAATCTGCCACCACTaGCTGAGACCTCATAAGGGG +
Preference number: 2 (lower is better)
Translates to: GVIGLGMRLMLGVLGTQSKICHH*LRPHKG
Trigger: CCCCTTATGAGGTCTCAGGCAGTGGTGGCAGATTTT...ACTCTGTGTACCAAGAACCCCTAGCATCAGCCTCATTCCTAAGCCAATAACGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR-3UTR GCA 90 bp TGGCTTAGGAATGAGGCTGATGCTAGGGGTTCTTGGTACACAGAGTTGCAACAAGGACAGGATCCACCCTaGTCAGTTATCAGGCTCTTG +
Preference number: 2 (lower is better)
Translates to: WLRNEADARGSWYTELQQGQDPP*SVIRLL
Trigger: CAAGAGCCTGATAACTGAGCAGGGTGGATCCTGTCC...TTGTTGCAACTCTGTGTACCAAGAACCCCTAGCATCAGCCTCATTCCTAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR-3UTR GCA 90 bp CTAGGGGTTCTTGGTACACAGAGTTGCAACAAGGGAGAATTAATGGGTGCAGCAGGACAGGATCCACCCTaGTCAGTTATCAGGCTCTTG +
Preference number: 2 (lower is better)
Translates to: LGVLGTQSCNKGELMGAAGQDPP*SVIRLL
Trigger: CAAGAGCCTGATAACTGAGCAGGGTGGATCCTGTCC...TGCTGCACCCATTAATTCTCCCTTGTTGCAACTCTGTGTACCAAGAACCCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR-3UTR TCA 90 bp TTTGAACTTCAGTTAACCTACAGGACCAAGGCTAATGCATGCTGTGCTGGTAGCGTGGGCACCAGAAGATaGAACCAACTCCATACAGGC +
Preference number: 2 (lower is better)
Translates to: FELQLTYRTKANACCAGSVGTRR*NQLHTG
Trigger: GCCTGTATGGAGTTGGTTTCATCTTCTGGTGCCCAC...GCTACCAGCACAGCATGCATTAGCCTTGGTCCTGTAGGTTAACTGAAGTTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR-3UTR GCA 90 bp AGGGTAGAGGTGATGTCCTTACTGGGATCAACGTCATCAGTGCTTCTGAAGAGACAGGACAGGGCTACTTaGTCCTCTCTTCAATGTGTC +
Preference number: 2 (lower is better)
Translates to: RVEVMSLLGSTSSVLLKRQDRAT*SSLQCV
Trigger: GACACATTGAAGAGAGGAGCAAGTAGCCCTGTCCTG...TCTCTTCAGAAGCACTGATGACGTTGATCCCAGTAAGGACATCACCTCTACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR-3UTR GCA 90 bp TCAGGGATCCTACCAGCTGGCATTGGTTCCAATAACAAGGCAGACACAGGAAAACAGGACAGGGCTACTTaGTCCTCTCTTCAATGTGTC +
Preference number: 2 (lower is better)
Translates to: SGILPAGIGSNNKADTGKQDRAT*SSLQCV
Trigger: GACACATTGAAGAGAGGAGCAAGTAGCCCTGTCCTG...TTTTCCTGTGTCTGCCTTGTTATTGGAACCAATGCCAGCTGGTAGGATCCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR-3UTR CCA 90 bp AGTGGGTGGGAAATACACGGTGTGAGGAGGATACGAAACAGCAGCACAAAGAGGGATGCTAGGGGTTCTTaGTACACAGAGTTGCAACAA +
Preference number: 2 (lower is better)
Translates to: SGWEIHGVRRIRNSSTKRDARGS*YTELQQ
Trigger: TTGTTGCAACTCTGTGTACCAAGAACCCCTAGCATC...CCTCTTTGTGCTGCTGTTTCGTATCCTCCTCACACCGTGTATTTCCCACCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR-3UTR TCA 90 bp GGAAATACACGGTGTGAGGAGGATACGAAACAGCAGCACAAAGAGGCAAGAGTGGCTGGCACTGATGTTTaGACTTCAGTTAACCTACAG +
Preference number: 2 (lower is better)
Translates to: GNTRCEEDTKQQHKEARVAGTDV*TSVNLQ
Trigger: CTGTAGGTTAACTGAAGTTCAAACATCAGTGCCAGC...CACTCTTGCCTCTTTGTGCTGCTGTTTCGTATCCTCCTCACACCGTGTATTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR-3UTR GCA 90 bp TGTGAAAAGGATGGAGGCAAGCTGGCACTGATGTTTGAACTTCAGTTAACCTACCCCCTAAGCCTCAAATaGACTCGCAGTTTTCCTGAG +
Preference number: 2 (lower is better)
Translates to: CEKDGGKLALMFELQLTYPLSLK*TRSFPE
Trigger: CTCAGGAAAACTGCGAGTGCATTTGAGGCTTAGGGG...GTAGGTTAACTGAAGTTCAAACATCAGTGCCAGCTTGCCTCCATCCTTTTCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR-3UTR GCA 90 bp ATAATATGTGAAAAGGATGGAGGCAAGCTGGCACTGATGTTTGAACTTCAGTTAGGGAGAATTAATGGGTaGAGCAGCTCCAGGGACAGG +
Preference number: 2 (lower is better)
Translates to: IICEKDGGKLALMFELQLGRING*SSSRDR
Trigger: CCTGTCCCTGGAGCTGCTGCACCCATTAATTCTCCC...TAACTGAAGTTCAAACATCAGTGCCAGCTTGCCTCCATCCTTTTCACATATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR-3UTR CCA 90 bp TTTGAACTTCAGTTAACCTACAGGACCAAGGCTAATGCATGCTGTGCTGGTAGCGATGCTAGGGGTTCTTaGTACACAGAGTTGCAACAA +
Preference number: 2 (lower is better)
Translates to: FELQLTYRTKANACCAGSDARGS*YTELQQ
Trigger: TTGTTGCAACTCTGTGTACCAAGAACCCCTAGCATC...GCTACCAGCACAGCATGCATTAGCCTTGGTCCTGTAGGTTAACTGAAGTTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR-3UTR GCA 90 bp ATAATATGTGAAAAGGATGGAGGCAAGCTGGCACTGATGTTTGAACTTCAGTTAAAAATCTGCCACCACTaGCTGAGACCTCATAAGGGG +
Preference number: 2 (lower is better)
Translates to: IICEKDGGKLALMFELQLKICHH*LRPHKG
Trigger: CCCCTTATGAGGTCTCAGGCAGTGGTGGCAGATTTT...TAACTGAAGTTCAAACATCAGTGCCAGCTTGCCTCCATCCTTTTCACATATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR-3UTR TCA 90 bp CACAAAGAGGCAAGAGTGGGAAAAGAGTCCAGAAAGTACAATCTTTTCCAGATCAATCTAAAGATGGAATaGCTACCCCTAAGCCTCAAA +
Preference number: 2 (lower is better)
Translates to: HKEARVGKESRKYNLFQINLKME*LPLSLK
Trigger: TTTGAGGCTTAGGGGTAGTCATTCCATCTTTAGATT...GATCTGGAAAAGATTGTACTTTCTGGACTCTTTTCCCACTCTTGCCTCTTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR TCA 72 bp AGGATCCACCCTGCTCAGTTATCAGGCTCTTGGTGGTaGTATCGCAAGGGGCTCAGGGATCCTACCAGCTGG +
Preference number: 3 (lower is better)
Translates to: RIHPAQLSGSWW*YRKGLRDPTSW
Trigger: CCAGCTGGTAGGATCCCTGAGCCCCTTGCGATATCACCACCAAGAGCCTGATAACTGAGCAGGGTGGATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR GCA 72 bp GGGTCAAATCAGGGTCAATGTCAGGACAGGGCTACTTaGTCCTCTCTTCAATGTGTCCAGGGGACTGGGCAG +
Preference number: 3 (lower is better)
Translates to: GSNQGQCQDRAT*SSLQCVQGTGQ
Trigger: CTGCCCAGTCCCCTGGACACATTGAAGAGAGGAGCAAGTAGCCCTGTCCTGACATTGACCCTGATTTGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR-3UTR CAA 90 bp CAAGGGAGAATTAATGGGTGCAGCAGCTCCAGGGACAGGATCCACCCTGCTCAGTCAGGACAGGGCTACTaGCTCCTCTCTTCAATGTGT +
Preference number: 3 (lower is better)
Translates to: QGRINGCSSSRDRIHPAQSGQGY*LLSSMC
Trigger: ACACATTGAAGAGAGGAGCAAGTAGCCCTGTCCTGA...CTGAGCAGGGTGGATCCTGTCCCTGGAGCTGCTGCACCCATTAATTCTCCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR TCA 72 bp CGCAGTTTTCCTGAGTTGACTCATAGTGGCATGGAATaGGGCTGGCAATGCCAATGGCCGTGGGCACCAGAA +
Preference number: 3 (lower is better)
Translates to: RSFPELTHSGME*GWQCQWPWAPE
Trigger: TTCTGGTGCCCACGGCCATTGGCATTGCCAGCCTCATTCCATGCCACTATGAGTCAACTCAGGAAAACTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR-3UTR CAA 90 bp GGGACAGGATCCACCCTGCTCAGTTATCAGGCTCTTGGTGGTGATATCGCAAGGTCAGGACAGGGCTACTaGCTCCTCTCTTCAATGTGT +
Preference number: 3 (lower is better)
Translates to: GTGSTLLSYQALGGDIARSGQGY*LLSSMC
Trigger: ACACATTGAAGAGAGGAGCAAGTAGCCCTGTCCTGA...CCTTGCGATATCACCACCAAGAGCCTGATAACTGAGCAGGGTGGATCCTGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR TCA 72 bp AGGCTGGCAATGCCAATGGCCGTGGGCACCAGAAGATaGAACCAACTCCATACAGGCGTTATTGGCTTAGGA +
Preference number: 3 (lower is better)
Translates to: RLAMPMAVGTRR*NQLHTGVIGLG
Trigger: TCCTAAGCCAATAACGCCTGTATGGAGTTGGTTTCATCTTCTGGTGCCCACGGCCATTGGCATTGCCAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR-3UTR CAA 90 bp AGTGGGTGGGAAATACACGGTGTGAGGAGGATACGAAACAGCAGCACAAAGAGGTCAGGACAGGGCTACTaGCTCCTCTCTTCAATGTGT +
Preference number: 3 (lower is better)
Translates to: SGWEIHGVRRIRNSSTKRSGQGY*LLSSMC
Trigger: ACACATTGAAGAGAGGAGCAAGTAGCCCTGTCCTGA...CCTCTTTGTGCTGCTGTTTCGTATCCTCCTCACACCGTGTATTTCCCACCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR-3UTR CAA 90 bp GAATTAGTAGGCTGTGACCCTGAGTGGGTGGGAAATACACGGTGTGAGGAGGATTCAGGACAGGGCTACTaGCTCCTCTCTTCAATGTGT +
Preference number: 3 (lower is better)
Translates to: ELVGCDPEWVGNTRCEEDSGQGY*LLSSMC
Trigger: ACACATTGAAGAGAGGAGCAAGTAGCCCTGTCCTGA...ATCCTCCTCACACCGTGTATTTCCCACCCACTCAGGGTCACAGCCTACTAATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR-3UTR CAA 90 bp GAATTAGTAGGCTGTGACCCTGAGTGGGTGGGAAATACACGGTGTGAGGAGGATTCCTACCAGCTGGCATaGGTTCCAATAACAAGGCAG +
Preference number: 3 (lower is better)
Translates to: ELVGCDPEWVGNTRCEEDSYQLA*VPITRQ
Trigger: CTGCCTTGTTATTGGAACCAATGCCAGCTGGTAGGA...ATCCTCCTCACACCGTGTATTTCCCACCCACTCAGGGTCACAGCCTACTAATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR GCA 72 bp ATGAGGCTGATGCTAGGGGTTCTTGGTACACAGAGTTaGAACAAGGGAGAATTAATGGGTGCAGCAGCTCCA +
Preference number: 3 (lower is better)
Translates to: MRLMLGVLGTQS*NKGELMGAAAP
Trigger: TGGAGCTGCTGCACCCATTAATTCTCCCTTGTTGCAACTCTGTGTACCAAGAACCCCTAGCATCAGCCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR-3UTR CAA 90 bp CTGAGTGGGTGGGAAATACACGGTGTGAGGAGGATACGAAACAGCAGCACAAAGTCTGACGGAGTAAAATaGGGACTGCAACTGAAAGGA +
Preference number: 3 (lower is better)
Translates to: LSGWEIHGVRRIRNSSTKSDGVK*GLQLKG
Trigger: TCCTTTCAGTTGCAGTCCCAATTTTACTCCGTCAGA...CTTTGTGCTGCTGTTTCGTATCCTCCTCACACCGTGTATTTCCCACCCACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR-3UTR CAA 90 bp GATGCTAGGGGTTCTTGGTACACAGAGTTGCAACAAGGGAGAATTAATGGGTGCTCCTACCAGCTGGCATaGGTTCCAATAACAAGGCAG +
Preference number: 3 (lower is better)
Translates to: DARGSWYTELQQGRINGCSYQLA*VPITRQ
Trigger: CTGCCTTGTTATTGGAACCAATGCCAGCTGGTAGGA...GCACCCATTAATTCTCCCTTGTTGCAACTCTGTGTACCAAGAACCCCTAGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR-3UTR CAA 90 bp GTTATTGGCTTAGGAATGAGGCTGATGCTAGGGGTTCTTGGTACACAGAGTTGCTCCTACCAGCTGGCATaGGTTCCAATAACAAGGCAG +
Preference number: 3 (lower is better)
Translates to: VIGLGMRLMLGVLGTQSCSYQLA*VPITRQ
Trigger: CTGCCTTGTTATTGGAACCAATGCCAGCTGGTAGGA...GCAACTCTGTGTACCAAGAACCCCTAGCATCAGCCTCATTCCTAAGCCAATAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR CCA 72 bp CACCAGAAGATGAAACCAACTCCATACAGGCGTTATTaGCTTAGGAATGAGGCTGATGCTAGGGGTTCTTGG +
Preference number: 3 (lower is better)
Translates to: HQKMKPTPYRRY*LRNEADARGSW
Trigger: CCAAGAACCCCTAGCATCAGCCTCATTCCTAAGCCAATAACGCCTGTATGGAGTTGGTTTCATCTTCTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR CCA 72 bp GAGAAGTTTGAGGAATTAGTAGGCTGTGACCCTGAGTaGGTGGGAAATACACGGTGTGAGGAGGATACGAAA +
Preference number: 3 (lower is better)
Translates to: EKFEELVGCDPE*VGNTRCEEDTK
Trigger: TTTCGTATCCTCCTCACACCGTGTATTTCCCACCCACTCAGGGTCACAGCCTACTAATTCCTCAAACTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR CCA 72 bp AGGAGGATACGAAACAGCAGCACAAAGAGGCAAGAGTaGGAAAAGAGTCCAGAAAGTACAATCTTTTCCAGA +
Preference number: 3 (lower is better)
Translates to: RRIRNSSTKRQE*EKSPESTIFSR
Trigger: TCTGGAAAAGATTGTACTTTCTGGACTCTTTTCCCACTCTTGCCTCTTTGTGCTGCTGTTTCGTATCCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR GCA 90 bp GGACAGGGCTACTTGCTCCTCTCTTCAATGTGTCCAGGGGACTGGGCAGCAGAAGGTCCAGCAGTTGACTaGGCTTGTGCGCAGCGTCGA +
Preference number: 4 (lower is better)
Translates to: GQGYLLLSSMCPGDWAAEGPAVD*ACAQRR
Trigger: TCGACGCTGCGCACAAGCGCAGTCAACTGCTGGACC...TTCTGCTGCCCAGTCCCCTGGACACATTGAAGAGAGGAGCAAGTAGCCCTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296097.8
CDS-3UTR TCA 90 bp ACAGGATCCACCCTGCTCAGTTATCAGGCTCTTGGTGGTGATATCGCAAGGGGCTCTGCCACCACTGCCTaGGACCTCATAAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: TGSTLLSYQALGGDIARGSATTA*DLIRGG
Trigger: CCCTCCCCTTATGAGGTCTCAGGCAGTGGTGGCAGA...GCCCCTTGCGATATCACCACCAAGAGCCTGATAACTGAGCAGGGTGGATCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CCA 90 bp GTGCAGCAGCTCCAGGGACAGGATCCACCCTGCTCAGTTATCAGGCTCTTGGTGAGAAGGCACCCTCACTaGGTCAGCACCTCATCCTTC +
Preference number: 4 (lower is better)
Translates to: VQQLQGQDPPCSVIRLLVRRHPH*VSTSSF
Trigger: GAAGGATGAGGTGCTGACCCAGTGAGGGTGCCTTCT...CACCAAGAGCCTGATAACTGAGCAGGGTGGATCCTGTCCCTGGAGCTGCTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CCA 90 bp AGGCTCTTGGTGGTGATATCGCAAGGGGCTCAGGGATCCTACCAGCTGGCATTGGGCTGGCAATGCCAATaGCCGTGGGCACCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: RLLVVISQGAQGSYQLALGWQCQ*PWAPED
Trigger: ATCTTCTGGTGCCCACGGCCATTGGCATTGCCAGCC...CAATGCCAGCTGGTAGGATCCCTGAGCCCCTTGCGATATCACCACCAAGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR TCA 90 bp AGTGGGTGGGAAATACACGGTGTGAGGAGGATACGAAACAGCAGCACAAAGAGGGCTCACTGCTGGGTTTaGAAGACCAGGGCGGCCCCA +
Preference number: 4 (lower is better)
Translates to: SGWEIHGVRRIRNSSTKRAHCWV*KTRAAP
Trigger: TGGGGCCGCCCTGGTCTTTCAAACCCAGCAGTGAGC...CCTCTTTGTGCTGCTGTTTCGTATCCTCCTCACACCGTGTATTTCCCACCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296097.8
ENST00000402462.5
CDS-3UTR GCA 90 bp GGCTACTTGCTCCTCTCTTCAATGTGTCCAGGGGACTGGGCAGCAGAAGGCACCGGACAGGATCCACCCTaGTCAGTTATCAGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: GYLLLSSMCPGDWAAEGTGQDPP*SVIRLL
Trigger: CAAGAGCCTGATAACTGAGCAGGGTGGATCCTGTCC...GGTGCCTTCTGCTGCCCAGTCCCCTGGACACATTGAAGAGAGGAGCAAGTAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR GCA 90 bp GCAGCAGCTCCAGGGACAGGATCCACCCTGCTCAGTTATCAGGCTCTTGGTGGTGGACAGGATCCACCCTaGTCAGTTATCAGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: AAAPGTGSTLLSYQALGGGQDPP*SVIRLL
Trigger: CAAGAGCCTGATAACTGAGCAGGGTGGATCCTGTCC...ACCACCAAGAGCCTGATAACTGAGCAGGGTGGATCCTGTCCCTGGAGCTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR GCA 90 bp CAAGGGAGAATTAATGGGTGCAGCAGCTCCAGGGACAGGATCCACCCTGCTCAGGGGAGAATTAATGGGTaGAGCAGCTCCAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: QGRINGCSSSRDRIHPAQGRING*SSSRDR
Trigger: CCTGTCCCTGGAGCTGCTGCACCCATTAATTCTCCC...CTGAGCAGGGTGGATCCTGTCCCTGGAGCTGCTGCACCCATTAATTCTCCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CCA 90 bp TGTGACCCTGAGTGGGTGGGAAATACACGGTGTGAGGAGGATACGAAACAGCAGATGTGTCCAGGGGACTaGGCAGCAGAAGGCACCCTC +
Preference number: 4 (lower is better)
Translates to: CDPEWVGNTRCEEDTKQQMCPGD*AAEGTL
Trigger: GAGGGTGCCTTCTGCTGCCCAGTCCCCTGGACACAT...CTGCTGTTTCGTATCCTCCTCACACCGTGTATTTCCCACCCACTCAGGGTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR CAA 72 bp CAGGGACAGGATCCACCCTGCTCAGTTATCAGGCTCTaGGTGGTGATATCGCAAGGGGCTCAGGGATCCTAC +
Preference number: 4 (lower is better)
Translates to: QGQDPPCSVIRL*VVISQGAQGSY
Trigger: GTAGGATCCCTGAGCCCCTTGCGATATCACCACCAAGAGCCTGATAACTGAGCAGGGTGGATCCTGTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR TCA 90 bp GTTATCAGGCTCTTGGTGGTGATATCGCAAGGGGCTCAGGGATCCTACCAGCTGTCATCCTTTTGGGTGTaGAACTTCACACCGGCCGGG +
Preference number: 4 (lower is better)
Translates to: VIRLLVVISQGAQGSYQLSSFWV*NFTPAG
Trigger: CCCGGCCGGTGTGAAGTTTCACACCCAAAAGGATGA...CAGCTGGTAGGATCCCTGAGCCCCTTGCGATATCACCACCAAGAGCCTGATAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR TCA 90 bp GCTAGGGGTTCTTGGTACACAGAGTTGCAACAAGGGAGAATTAATGGGTGCAGCGCTCACTGCTGGGTTTaGAAGACCAGGGCGGCCCCA +
Preference number: 4 (lower is better)
Translates to: ARGSWYTELQQGRINGCSAHCWV*KTRAAP
Trigger: TGGGGCCGCCCTGGTCTTTCAAACCCAGCAGTGAGC...GCTGCACCCATTAATTCTCCCTTGTTGCAACTCTGTGTACCAAGAACCCCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296097.8
ENST00000402462.5
CDS-3UTR TCA 90 bp TCCACCCTGCTCAGTTATCAGGCTCTTGGTGGTGATATCGCAAGGGGCTCAGGGGGGAGGGCTGCTTTCTaGCGGAGTAAAATTGGGACT +
Preference number: 4 (lower is better)
Translates to: STLLSYQALGGDIARGSGGRAAF*RSKIGT
Trigger: AGTCCCAATTTTACTCCGTCAGAAAGCAGCCCTCCC...CCCTGAGCCCCTTGCGATATCACCACCAAGAGCCTGATAACTGAGCAGGGTGGA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR TCA 90 bp GCAACCCCATACAGAGTTGTGGTACCAAGGGTAGAGGTGATGTCCTTACTGGGATCTGCCACCACTGCCTaGGACCTCATAAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: ATPYRVVVPRVEVMSLLGSATTA*DLIRGG
Trigger: CCCTCCCCTTATGAGGTCTCAGGCAGTGGTGGCAGA...TCCCAGTAAGGACATCACCTCTACCCTTGGTACCACAACTCTGTATGGGGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR TCA 90 bp AGGACAGGGCTACTTGCTCCTCTCTTCAATGTGTCCAGGGGACTGGGCAGCAGAGTGGGCACCAGAAGATaGAACCAACTCCATACAGGC +
Preference number: 4 (lower is better)
Translates to: RTGLLAPLFNVSRGLGSRVGTRR*NQLHTG
Trigger: GCCTGTATGGAGTTGGTTTCATCTTCTGGTGCCCAC...TCTGCTGCCCAGTCCCCTGGACACATTGAAGAGAGGAGCAAGTAGCCCTGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CCA 90 bp CACGGTGTGAGGAGGATACGAAACAGCAGCACAAAGAGGCAAGAGTGGGAAAAGATGTGTCCAGGGGACTaGGCAGCAGAAGGCACCCTC +
Preference number: 4 (lower is better)
Translates to: HGVRRIRNSSTKRQEWEKMCPGD*AAEGTL
Trigger: GAGGGTGCCTTCTGCTGCCCAGTCCCCTGGACACAT...CTTTTCCCACTCTTGCCTCTTTGTGCTGCTGTTTCGTATCCTCCTCACACCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CCA 90 bp GCTCAGGGATCCTACCAGCTGGCATTGGTTCCAATAACAAGGCAGACACAGGAAATGTGTCCAGGGGACTaGGCAGCAGAAGGCACCCTC +
Preference number: 4 (lower is better)
Translates to: AQGSYQLALVPITRQTQEMCPGD*AAEGTL
Trigger: GAGGGTGCCTTCTGCTGCCCAGTCCCCTGGACACAT...TTCCTGTGTCTGCCTTGTTATTGGAACCAATGCCAGCTGGTAGGATCCCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CCA 90 bp CTGCTCAGTTATCAGGCTCTTGGTGGTGATATCGCAAGGGGCTCAGGGATCCTAGGCTGGCAATGCCAATaGCCGTGGGCACCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: LLSYQALGGDIARGSGILGWQCQ*PWAPED
Trigger: ATCTTCTGGTGCCCACGGCCATTGGCATTGCCAGCC...TAGGATCCCTGAGCCCCTTGCGATATCACCACCAAGAGCCTGATAACTGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CCA 90 bp AACAAGGGAGAATTAATGGGTGCAGCAGCTCCAGGGACAGGATCCACCCTGCTCGTGACCCTGAGTGGGTaGGAAATACACGGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: NKGELMGAAAPGTGSTLLVTLSG*EIHGVR
Trigger: CCTCACACCGTGTATTTCCCACCCACTCAGGGTCAC...GAGCAGGGTGGATCCTGTCCCTGGAGCTGCTGCACCCATTAATTCTCCCTTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CCA 90 bp GATCCACCCTGCTCAGTTATCAGGCTCTTGGTGGTGATATCGCAAGGGGCTCAGGTGACCCTGAGTGGGTaGGAAATACACGGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: DPPCSVIRLLVVISQGAQVTLSG*EIHGVR
Trigger: CCTCACACCGTGTATTTCCCACCCACTCAGGGTCAC...CTGAGCCCCTTGCGATATCACCACCAAGAGCCTGATAACTGAGCAGGGTGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CCA 90 bp CACGGTGTGAGGAGGATACGAAACAGCAGCACAAAGAGGCAAGAGTGGGAAAAGTCCACCTCCTGGGTCTaGCCCTTTACCTGGGAGTCG +
Preference number: 4 (lower is better)
Translates to: HGVRRIRNSSTKRQEWEKSTSWV*PFTWES
Trigger: CGACTCCCAGGTAAAGGGCCAGACCCAGGAGGTGGA...CTTTTCCCACTCTTGCCTCTTTGTGCTGCTGTTTCGTATCCTCCTCACACCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402462.5
3UTR CAA 72 bp GGGGTCAAATCAGGGTCAATGTCAGGACAGGGCTACTaGCTCCTCTCTTCAATGTGTCCAGGGGACTGGGCA +
Preference number: 4 (lower is better)
Translates to: GVKSGSMSGQGY*LLSSMCPGDWA
Trigger: TGCCCAGTCCCCTGGACACATTGAAGAGAGGAGCAAGTAGCCCTGTCCTGACATTGACCCTGATTTGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR TCA 90 bp ATTGGGACTGCAACTGAAAGGAAGAGTAGCTGGGCAACCCCATACAGAGTTGTGTCTGCCACCACTGCCTaGGACCTCATAAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: IGTATERKSSWATPYRVVSATTA*DLIRGG
Trigger: CCCTCCCCTTATGAGGTCTCAGGCAGTGGTGGCAGA...CACAACTCTGTATGGGGTTGCCCAGCTACTCTTCCTTTCAGTTGCAGTCCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR TCA 90 bp CAAGGGAGAATTAATGGGTGCAGCAGCTCCAGGGACAGGATCCACCCTGCTCAGGGGAAATACACGGTGTaGGGAGGATACGAAACAGCA +
Preference number: 4 (lower is better)
Translates to: QGRINGCSSSRDRIHPAQGKYTV*GGYETA
Trigger: TGCTGTTTCGTATCCTCCTCACACCGTGTATTTCCC...CTGAGCAGGGTGGATCCTGTCCCTGGAGCTGCTGCACCCATTAATTCTCCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR GCA 90 bp GATCCACCCTGCTCAGTTATCAGGCTCTTGGTGGTGATATCGCAAGGGGCTCAGCTTAAGCCAGGTGGGTaGCCTTCATCCTTTTGGGTG +
Preference number: 4 (lower is better)
Translates to: DPPCSVIRLLVVISQGAQLKPGG*PSSFWV
Trigger: CACCCAAAAGGATGAAGGGCACCCACCTGGCTTAAG...CTGAGCCCCTTGCGATATCACCACCAAGAGCCTGATAACTGAGCAGGGTGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR GCA 90 bp CAAGGGAGAATTAATGGGTGCAGCAGCTCCAGGGACAGGATCCACCCTGCTCAGAGGGTGGGGAAGCAATaGGGAATGGCTGTAGGATTT +
Preference number: 4 (lower is better)
Translates to: QGRINGCSSSRDRIHPAQRVGKQ*GMAVGF
Trigger: AAATCCTACAGCCATTCCGCATTGCTTCCCCACCCT...CTGAGCAGGGTGGATCCTGTCCCTGGAGCTGCTGCACCCATTAATTCTCCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296097.8
ENST00000402462.5
CDS-3UTR GCA 90 bp AGGCTCTTGGTGGTGATATCGCAAGGGGCTCAGGGATCCTACCAGCTGGCATTGAAAATCTGCCACCACTaGCTGAGACCTCATAAGGGG +
Preference number: 4 (lower is better)
Translates to: RLLVVISQGAQGSYQLALKICHH*LRPHKG
Trigger: CCCCTTATGAGGTCTCAGGCAGTGGTGGCAGATTTT...CAATGCCAGCTGGTAGGATCCCTGAGCCCCTTGCGATATCACCACCAAGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CCA 90 bp TCCACCCTGCTCAGTTATCAGGCTCTTGGTGGTGATATCGCAAGGGGCTCAGGGTGGAGTAAACACCTCTaGGTCTGTCCAAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: STLLSYQALGGDIARGSGWSKHL*VCPSSL
Trigger: CAGTGAGCTTGGACAGACCCAGAGGTGTTTACTCCA...CCCTGAGCCCCTTGCGATATCACCACCAAGAGCCTGATAACTGAGCAGGGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296097.8
ENST00000402462.5
CDS-3UTR CCA 90 bp CCATACAGGCGTTATTGGCTTAGGAATGAGGCTGATGCTAGGGGTTCTTGGTACGCAACCTCCACCTCCTaGGTCTGGCCCTTTACCTGG +
Preference number: 4 (lower is better)
Translates to: PYRRYWLRNEADARGSWYATSTS*VWPFTW
Trigger: CCAGGTAAAGGGCCAGACCCAGGAGGTGGAGGTTGC...GTACCAAGAACCCCTAGCATCAGCCTCATTCCTAAGCCAATAACGCCTGTATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402462.5
CDS-3UTR TCA 90 bp GAGATTCTTGAGATCCTTATAAGAAGAGGGGTCAAATCAGGGTCAATGTCAGGAGCCGGGTCCAGCAGTTaGCTGCGCTTGTGCGCAGCG +
Preference number: 4 (lower is better)
Translates to: EILEILIRRGVKSGSMSGAGSSS*LRLCAA
Trigger: CGCTGCGCACAAGCGCAGTCAACTGCTGGACCCGGC...TCCTGACATTGACCCTGATTTGACCCCTCTTCTTATAAGGATCTCAAGAATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296097.8
CDS-3UTR TCA 90 bp CTGAGTGGGTGGGAAATACACGGTGTGAGGAGGATACGAAACAGCAGCACAAAGTCATCCTTTTGGGTGTaGAACTTCACACCGGCCGGG +
Preference number: 4 (lower is better)
Translates to: LSGWEIHGVRRIRNSSTKSSFWV*NFTPAG
Trigger: CCCGGCCGGTGTGAAGTTTCACACCCAAAAGGATGA...CTTTGTGCTGCTGTTTCGTATCCTCCTCACACCGTGTATTTCCCACCCACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR TCA 90 bp GATCCTTATAAGAAGAGGGGTCAAATCAGGGTCAATGTCAGGACAGGGCTACTTAGGGCGGCCCCAGCCTaGACGGACAGGATCAGGAAT +
Preference number: 4 (lower is better)
Translates to: DPYKKRGQIRVNVRTGLLRAAPA*TDRIRN
Trigger: ATTCCTGATCCTGTCCGTTCAGGCTGGGGCCGCCCT...AAGTAGCCCTGTCCTGACATTGACCCTGATTTGACCCCTCTTCTTATAAGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296097.8
ENST00000402462.5
CDS-3UTR TCA 90 bp AACAAGGGAGAATTAATGGGTGCAGCAGCTCCAGGGACAGGATCCACCCTGCTCTCGCTCAGTATGGCATaGGCTGCGTTGATCTCTTTG +
Preference number: 4 (lower is better)
Translates to: NKGELMGAAAPGTGSTLLSLSMA*AALISL
Trigger: CAAAGAGATCAACGCAGCTCATGCCATACTGAGCGA...GAGCAGGGTGGATCCTGTCCCTGGAGCTGCTGCACCCATTAATTCTCCCTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
CDS-3UTR TCA 90 bp CAAGGGGCTCAGGGATCCTACCAGCTGGCATTGGTTCCAATAACAAGGCAGACAGGGAGGGCTGCTTTCTaGCGGAGTAAAATTGGGACT +
Preference number: 4 (lower is better)
Translates to: QGAQGSYQLALVPITRQTGRAAF*RSKIGT
Trigger: AGTCCCAATTTTACTCCGTCAGAAAGCAGCCCTCCC...TGTCTGCCTTGTTATTGGAACCAATGCCAGCTGGTAGGATCCCTGAGCCCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR TCA 90 bp CCATACAGGCGTTATTGGCTTAGGAATGAGGCTGATGCTAGGGGTTCTTGGTACTCAGGCTCTTGGTGGTaGTATCGCAAGGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: PYRRYWLRNEADARGSWYSGSWW*YRKGLR
Trigger: CCTGAGCCCCTTGCGATATCACCACCAAGAGCCTGA...GTACCAAGAACCCCTAGCATCAGCCTCATTCCTAAGCCAATAACGCCTGTATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR TCA 90 bp GCTAGGGGTTCTTGGTACACAGAGTTGCAACAAGGGAGAATTAATGGGTGCAGCTCAGGCTCTTGGTGGTaGTATCGCAAGGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: ARGSWYTELQQGRINGCSSGSWW*YRKGLR
Trigger: CCTGAGCCCCTTGCGATATCACCACCAAGAGCCTGA...GCTGCACCCATTAATTCTCCCTTGTTGCAACTCTGTGTACCAAGAACCCCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR GCA 90 bp AGGGGCTCAGGGATCCTACCAGCTGGCATTGGTTCCAATAACAAGGCAGACACACTTAAGCCAGGTGGGTaGCCTTCATCCTTTTGGGTG +
Preference number: 4 (lower is better)
Translates to: RGSGILPAGIGSNNKADTLKPGG*PSSFWV
Trigger: CACCCAAAAGGATGAAGGGCACCCACCTGGCTTAAG...TGTGTCTGCCTTGTTATTGGAACCAATGCCAGCTGGTAGGATCCCTGAGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR GCA 90 bp TGCTCAGTTATCAGGCTCTTGGTGGTGATATCGCAAGGGGCTCAGGGATCCTACGGACAGCCGGTGTGCTaGTTCCTTCACAGTAGACAT +
Preference number: 4 (lower is better)
Translates to: CSVIRLLVVISQGAQGSYGQPVC*FLHSRH
Trigger: ATGTCTACTGTGAAGGAAGCAGCACACCGGCTGTCC...GTAGGATCCCTGAGCCCCTTGCGATATCACCACCAAGAGCCTGATAACTGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR GCA 90 bp GTGCAGCAGCTCCAGGGACAGGATCCACCCTGCTCAGTTATCAGGCTCTTGGTGCTTAAGATCCAGCACTaGATAGAGGCTCATCTCACT +
Preference number: 4 (lower is better)
Translates to: VQQLQGQDPPCSVIRLLVLKIQH*IEAHLT
Trigger: AGTGAGATGAGCCTCTATGCAGTGCTGGATCTTAAG...CACCAAGAGCCTGATAACTGAGCAGGGTGGATCCTGTCCCTGGAGCTGCTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CCA 90 bp TGCTCAGTTATCAGGCTCTTGGTGGTGATATCGCAAGGGGCTCAGGGATCCTACGGCTCATCTCACTTTTaGACAGCCGGTGTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: CSVIRLLVVISQGAQGSYGSSHF*TAGVLL
Trigger: AAGCAGCACACCGGCTGTCCAAAAGTGAGATGAGCC...GTAGGATCCCTGAGCCCCTTGCGATATCACCACCAAGAGCCTGATAACTGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CCA 90 bp GTTATCAGGCTCTTGGTGGTGATATCGCAAGGGGCTCAGGGATCCTACCAGCTGTACTCAAAAGGAGGGTaGGGAAGCAATGCGGAATGG +
Preference number: 4 (lower is better)
Translates to: VIRLLVVISQGAQGSYQLYSKGG*GSNAEW
Trigger: CCATTCCGCATTGCTTCCCCACCCTCCTTTTGAGTA...CAGCTGGTAGGATCCCTGAGCCCCTTGCGATATCACCACCAAGAGCCTGATAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296097.8
ENST00000402462.5
CDS-3UTR CCA 90 bp AGGCTCTTGGTGGTGATATCGCAAGGGGCTCAGGGATCCTACCAGCTGGCATTGACTATCCTGCTCAGGTaGTGGTTTAAGTGCTCCACA +
Preference number: 4 (lower is better)
Translates to: RLLVVISQGAQGSYQLALTILLR*WFKCST
Trigger: TGTGGAGCACTTAAACCACCACCTGAGCAGGATAGT...CAATGCCAGCTGGTAGGATCCCTGAGCCCCTTGCGATATCACCACCAAGAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CCA 90 bp ATACAGAGTTGTGGTACCAAGGGTAGAGGTGATGTCCTTACTGGGATCAACGTCATGTGTCCAGGGGACTaGGCAGCAGAAGGCACCCTC +
Preference number: 4 (lower is better)
Translates to: IQSCGTKGRGDVLTGINVMCPGD*AAEGTL
Trigger: GAGGGTGCCTTCTGCTGCCCAGTCCCCTGGACACAT...GACGTTGATCCCAGTAAGGACATCACCTCTACCCTTGGTACCACAACTCTGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CCA 90 bp GTGCAGCAGCTCCAGGGACAGGATCCACCCTGCTCAGTTATCAGGCTCTTGGTGCCATACAGGCGTTATTaGCTTAGGAATGAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: VQQLQGQDPPCSVIRLLVPYRRY*LRNEAD
Trigger: ATCAGCCTCATTCCTAAGCCAATAACGCCTGTATGG...CACCAAGAGCCTGATAACTGAGCAGGGTGGATCCTGTCCCTGGAGCTGCTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CCA 90 bp GGCTTAGGAATGAGGCTGATGCTAGGGGTTCTTGGTACACAGAGTTGCAACAAGGGCTGGCAATGCCAATaGCCGTGGGCACCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: GLGMRLMLGVLGTQSCNKGWQCQ*PWAPED
Trigger: ATCTTCTGGTGCCCACGGCCATTGGCATTGCCAGCC...CTTGTTGCAACTCTGTGTACCAAGAACCCCTAGCATCAGCCTCATTCCTAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CCA 90 bp AGTGGGTGGGAAATACACGGTGTGAGGAGGATACGAAACAGCAGCACAAAGAGGGGCTGTGACCCTGAGTaGGTGGGAAATACACGGTGT +
Preference number: 4 (lower is better)
Translates to: SGWEIHGVRRIRNSSTKRGCDPE*VGNTRC
Trigger: ACACCGTGTATTTCCCACCCACTCAGGGTCACAGCC...CCTCTTTGTGCTGCTGTTTCGTATCCTCCTCACACCGTGTATTTCCCACCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CCA 90 bp GAATTAGTAGGCTGTGACCCTGAGTGGGTGGGAAATACACGGTGTGAGGAGGATGGCTGTGACCCTGAGTaGGTGGGAAATACACGGTGT +
Preference number: 4 (lower is better)
Translates to: ELVGCDPEWVGNTRCEEDGCDPE*VGNTRC
Trigger: ACACCGTGTATTTCCCACCCACTCAGGGTCACAGCC...ATCCTCCTCACACCGTGTATTTCCCACCCACTCAGGGTCACAGCCTACTAATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR TCA 90 bp CTGCAACTGAAAGGAAGAGTAGCTGGGCAACCCCATACAGAGTTGTGGTACCAATCATCCTTTTGGGTGTaGAACTTCACACCGGCCGGG +
Preference number: 4 (lower is better)
Translates to: LQLKGRVAGQPHTELWYQSSFWV*NFTPAG
Trigger: CCCGGCCGGTGTGAAGTTTCACACCCAAAAGGATGA...TTGGTACCACAACTCTGTATGGGGTTGCCCAGCTACTCTTCCTTTCAGTTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR TCA 90 bp GTTATCAGGCTCTTGGTGGTGATATCGCAAGGGGCTCAGGGATCCTACCAGCTGTTTGAAGTCTTCAGGTaGGGCGCCCTTCTTAAGATC +
Preference number: 4 (lower is better)
Translates to: VIRLLVVISQGAQGSYQLFEVFR*GALLKI
Trigger: GATCTTAAGAAGGGCGCCTCACCTGAAGACTTCAAA...CAGCTGGTAGGATCCCTGAGCCCCTTGCGATATCACCACCAAGAGCCTGATAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR TCA 90 bp CTGAGTGGGTGGGAAATACACGGTGTGAGGAGGATACGAAACAGCAGCACAAAGATCACATTTGGCTCCTaGCCTTGGAGGCTGACTCTG +
Preference number: 4 (lower is better)
Translates to: LSGWEIHGVRRIRNSSTKITFGS*PWRLTL
Trigger: CAGAGTCAGCCTCCAAGGTCAGGAGCCAAATGTGAT...CTTTGTGCTGCTGTTTCGTATCCTCCTCACACCGTGTATTTCCCACCCACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR TCA 90 bp GATCCTTATAAGAAGAGGGGTCAAATCAGGGTCAATGTCAGGACAGGGCTACTTTCTGCCACCACTGCCTaGGACCTCATAAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: DPYKKRGQIRVNVRTGLLSATTA*DLIRGG
Trigger: CCCTCCCCTTATGAGGTCTCAGGCAGTGGTGGCAGA...AAGTAGCCCTGTCCTGACATTGACCCTGATTTGACCCCTCTTCTTATAAGGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR TCA 90 bp CTAGGGGTTCTTGGTACACAGAGTTGCAACAAGGGAGAATTAATGGGTGCAGCATCAGGCTCTTGGTGGTaGTATCGCAAGGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LGVLGTQSCNKGELMGAASGSWW*YRKGLR
Trigger: CCTGAGCCCCTTGCGATATCACCACCAAGAGCCTGA...TGCTGCACCCATTAATTCTCCCTTGTTGCAACTCTGTGTACCAAGAACCCCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR TCA 90 bp AATGGGTGCAGCAGCTCCAGGGACAGGATCCACCCTGCTCAGTTATCAGGCTCTGAGAAGCAGCATCTGTaGGAACTTCTACAAGTAAGG +
Preference number: 4 (lower is better)
Translates to: NGCSSSRDRIHPAQLSGSEKQHL*ELLQVR
Trigger: CCTTACTTGTAGAAGTTCTCACAGATGCTGCTTCTC...AGAGCCTGATAACTGAGCAGGGTGGATCCTGTCCCTGGAGCTGCTGCACCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406962.1
CDS-3UTR GCA 90 bp GTGCAGCAGCTCCAGGGACAGGATCCACCCTGCTCAGTTATCAGGCTCTTGGTGCTCTTTGAATATTTCTaGTGCTTGAGCATTCCCTGG +
Preference number: 4 (lower is better)
Translates to: VQQLQGQDPPCSVIRLLVLFEYF*CLSIPW
Trigger: CCAGGGAATGCTCAAGCAGCAGAAATATTCAAAGAG...CACCAAGAGCCTGATAACTGAGCAGGGTGGATCCTGTCCCTGGAGCTGCTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
CDS-3UTR GCA 90 bp GAATTAATGGGTGCAGCAGCTCCAGGGACAGGATCCACCCTGCTCAGTTATCAGCAGGACAGGGCTACTTaGTCCTCTCTTCAATGTGTC +
Preference number: 4 (lower is better)
Translates to: ELMGAAAPGTGSTLLSYQQDRAT*SSLQCV
Trigger: GACACATTGAAGAGAGGAGCAAGTAGCCCTGTCCTG...CTGATAACTGAGCAGGGTGGATCCTGTCCCTGGAGCTGCTGCACCCATTAATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR GCA 90 bp AGGGGCTCAGGGATCCTACCAGCTGGCATTGGTTCCAATAACAAGGCAGACACACAGGACAGGGCTACTTaGTCCTCTCTTCAATGTGTC +
Preference number: 4 (lower is better)
Translates to: RGSGILPAGIGSNNKADTQDRAT*SSLQCV
Trigger: GACACATTGAAGAGAGGAGCAAGTAGCCCTGTCCTG...TGTGTCTGCCTTGTTATTGGAACCAATGCCAGCTGGTAGGATCCCTGAGCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR GCA 90 bp CAACTGAAAGGAAGAGTAGCTGGGCAACCCCATACAGAGTTGTGGTACCAAGGGGGACAGGATCCACCCTaGTCAGTTATCAGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: QLKGRVAGQPHTELWYQGGQDPP*SVIRLL
Trigger: CAAGAGCCTGATAACTGAGCAGGGTGGATCCTGTCC...CCCTTGGTACCACAACTCTGTATGGGGTTGCCCAGCTACTCTTCCTTTCAGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR GCA 90 bp GGAAATACACGGTGTGAGGAGGATACGAAACAGCAGCACAAAGAGGCAAGAGTGGGGAGAATTAATGGGTaGAGCAGCTCCAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: GNTRCEEDTKQQHKEARVGRING*SSSRDR
Trigger: CCTGTCCCTGGAGCTGCTGCACCCATTAATTCTCCC...CACTCTTGCCTCTTTGTGCTGCTGTTTCGTATCCTCCTCACACCGTGTATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR GCA 90 bp GACGGAGTAAAATTGGGACTGCAACTGAAAGGAAGAGTAGCTGGGCAACCCCATGGGAGAATTAATGGGTaGAGCAGCTCCAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: DGVKLGLQLKGRVAGQPHGRING*SSSRDR
Trigger: CCTGTCCCTGGAGCTGCTGCACCCATTAATTCTCCC...ATGGGGTTGCCCAGCTACTCTTCCTTTCAGTTGCAGTCCCAATTTTACTCCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR GCA 90 bp TGTGACCCTGAGTGGGTGGGAAATACACGGTGTGAGGAGGATACGAAACAGCAGCCCCTAAGCCTCAAATaGACTCGCAGTTTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: CDPEWVGNTRCEEDTKQQPLSLK*TRSFPE
Trigger: CTCAGGAAAACTGCGAGTGCATTTGAGGCTTAGGGG...CTGCTGTTTCGTATCCTCCTCACACCGTGTATTTCCCACCCACTCAGGGTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CCA 90 bp GCTAGGGGTTCTTGGTACACAGAGTTGCAACAAGGGAGAATTAATGGGTGCAGCGCAACCTCCACCTCCTaGGTGCAAGCGATTTTCCTG +
Preference number: 4 (lower is better)
Translates to: ARGSWYTELQQGRINGCSATSTS*VQAIFL
Trigger: CAGGAAAATCGCTTGCACCCAGGAGGTGGAGGTTGC...GCTGCACCCATTAATTCTCCCTTGTTGCAACTCTGTGTACCAAGAACCCCTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296097.8
CDS-3UTR CCA 90 bp GGGGTCAAATCAGGGTCAATGTCAGGACAGGGCTACTTGCTCCTCTCTTCAATGGGCTCATCTCACTTTTaGACAGCCGGTGTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: GVKSGSMSGQGYLLLSSMGSSHF*TAGVLL
Trigger: AAGCAGCACACCGGCTGTCCAAAAGTGAGATGAGCC...CATTGAAGAGAGGAGCAAGTAGCCCTGTCCTGACATTGACCCTGATTTGACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CCA 90 bp CTGAGTGGGTGGGAAATACACGGTGTGAGGAGGATACGAAACAGCAGCACAAAGCAATGCCAATGGCCGTaGGCACCAGAAGATGAAACC +
Preference number: 4 (lower is better)
Translates to: LSGWEIHGVRRIRNSSTKQCQWP*APEDET
Trigger: GGTTTCATCTTCTGGTGCCCACGGCCATTGGCATTG...CTTTGTGCTGCTGTTTCGTATCCTCCTCACACCGTGTATTTCCCACCCACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CCA 90 bp CTTAGGAATGAGGCTGATGCTAGGGGTTCTTGGTACACAGAGTTGCAACAAGGGGTGACCCTGAGTGGGTaGGAAATACACGGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: LRNEADARGSWYTELQQGVTLSG*EIHGVR
Trigger: CCTCACACCGTGTATTTCCCACCCACTCAGGGTCAC...CCCTTGTTGCAACTCTGTGTACCAAGAACCCCTAGCATCAGCCTCATTCCTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CCA 90 bp ATACACGGTGTGAGGAGGATACGAAACAGCAGCACAAAGAGGCAAGAGTGGGAAGGCTGTGACCCTGAGTaGGTGGGAAATACACGGTGT +
Preference number: 4 (lower is better)
Translates to: IHGVRRIRNSSTKRQEWEGCDPE*VGNTRC
Trigger: ACACCGTGTATTTCCCACCCACTCAGGGTCACAGCC...TTCCCACTCTTGCCTCTTTGTGCTGCTGTTTCGTATCCTCCTCACACCGTGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CCA 90 bp ATTGGGACTGCAACTGAAAGGAAGAGTAGCTGGGCAACCCCATACAGAGTTGTGGGCTGTGACCCTGAGTaGGTGGGAAATACACGGTGT +
Preference number: 4 (lower is better)
Translates to: IGTATERKSSWATPYRVVGCDPE*VGNTRC
Trigger: ACACCGTGTATTTCCCACCCACTCAGGGTCACAGCC...CACAACTCTGTATGGGGTTGCCCAGCTACTCTTCCTTTCAGTTGCAGTCCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR TCA 90 bp CTGAGTGGGTGGGAAATACACGGTGTGAGGAGGATACGAAACAGCAGCACAAAGAGTTTCCTACCCAGGTaGTACTCAAAAGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: LSGWEIHGVRRIRNSSTKSFLPR*YSKGGW
Trigger: CCACCCTCCTTTTGAGTATCACCTGGGTAGGAAACT...CTTTGTGCTGCTGTTTCGTATCCTCCTCACACCGTGTATTTCCCACCCACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296097.8
ENST00000402462.5
CDS-3UTR TCA 90 bp AGGCTCTTGGTGGTGATATCGCAAGGGGCTCAGGGATCCTACCAGCTGGCATTGAATATTTCTGCTGCTTaGGCATTCCCTGGATTCTTG +
Preference number: 4 (lower is better)
Translates to: RLLVVISQGAQGSYQLALNISAA*AFPGFL
Trigger: CAAGAATCCAGGGAATGCTCAAGCAGCAGAAATATT...CAATGCCAGCTGGTAGGATCCCTGAGCCCCTTGCGATATCACCACCAAGAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
CDS-3UTR TCA 90 bp GGCTTAGGAATGAGGCTGATGCTAGGGGTTCTTGGTACACAGAGTTGCAACAAGATCACATTTGGCTCCTaGCCTTGGAGGCTGACTCTG +
Preference number: 4 (lower is better)
Translates to: GLGMRLMLGVLGTQSCNKITFGS*PWRLTL
Trigger: CAGAGTCAGCCTCCAAGGTCAGGAGCCAAATGTGAT...CTTGTTGCAACTCTGTGTACCAAGAACCCCTAGCATCAGCCTCATTCCTAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR TCA 90 bp GATCCACCCTGCTCAGTTATCAGGCTCTTGGTGGTGATATCGCAAGGGGCTCAGGCTGGCACTGATGTTTaGACTTCAGTTAACCTACAG +
Preference number: 4 (lower is better)
Translates to: DPPCSVIRLLVVISQGAQAGTDV*TSVNLQ
Trigger: CTGTAGGTTAACTGAAGTTCAAACATCAGTGCCAGC...CTGAGCCCCTTGCGATATCACCACCAAGAGCCTGATAACTGAGCAGGGTGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR GCA 90 bp TCCACCCTGCTCAGTTATCAGGCTCTTGGTGGTGATATCGCAAGGGGCTCAGGGCTCTTTGAATATTTCTaGTGCTTGAGCATTCCCTGG +
Preference number: 4 (lower is better)
Translates to: STLLSYQALGGDIARGSGLFEYF*CLSIPW
Trigger: CCAGGGAATGCTCAAGCAGCAGAAATATTCAAAGAG...CCCTGAGCCCCTTGCGATATCACCACCAAGAGCCTGATAACTGAGCAGGGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
CDS-3UTR GCA 90 bp CAACTGAAAGGAAGAGTAGCTGGGCAACCCCATACAGAGTTGTGGTACCAAGGGCAGGACAGGGCTACTTaGTCCTCTCTTCAATGTGTC +
Preference number: 4 (lower is better)
Translates to: QLKGRVAGQPHTELWYQGQDRAT*SSLQCV
Trigger: GACACATTGAAGAGAGGAGCAAGTAGCCCTGTCCTG...CCCTTGGTACCACAACTCTGTATGGGGTTGCCCAGCTACTCTTCCTTTCAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR GCA 90 bp CTGCAACTGAAAGGAAGAGTAGCTGGGCAACCCCATACAGAGTTGTGGTACCAAGGACAGGATCCACCCTaGTCAGTTATCAGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: LQLKGRVAGQPHTELWYQGQDPP*SVIRLL
Trigger: CAAGAGCCTGATAACTGAGCAGGGTGGATCCTGTCC...TTGGTACCACAACTCTGTATGGGGTTGCCCAGCTACTCTTCCTTTCAGTTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR GCA 90 bp CACGGTGTGAGGAGGATACGAAACAGCAGCACAAAGAGGCAAGAGTGGGAAAAGCCCCTAAGCCTCAAATaGACTCGCAGTTTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: HGVRRIRNSSTKRQEWEKPLSLK*TRSFPE
Trigger: CTCAGGAAAACTGCGAGTGCATTTGAGGCTTAGGGG...CTTTTCCCACTCTTGCCTCTTTGTGCTGCTGTTTCGTATCCTCCTCACACCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CCA 90 bp GCTCAGGGATCCTACCAGCTGGCATTGGTTCCAATAACAAGGCAGACACAGGAATGGAGTAAACACCTCTaGGTCTGTCCAAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: AQGSYQLALVPITRQTQEWSKHL*VCPSSL
Trigger: CAGTGAGCTTGGACAGACCCAGAGGTGTTTACTCCA...TTCCTGTGTCTGCCTTGTTATTGGAACCAATGCCAGCTGGTAGGATCCCTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296097.8
ENST00000402462.5
CDS-3UTR CCA 90 bp GACGGAGTAAAATTGGGACTGCAACTGAAAGGAAGAGTAGCTGGGCAACCCCATGGCTCATCTCACTTTTaGACAGCCGGTGTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: DGVKLGLQLKGRVAGQPHGSSHF*TAGVLL
Trigger: AAGCAGCACACCGGCTGTCCAAAAGTGAGATGAGCC...ATGGGGTTGCCCAGCTACTCTTCCTTTCAGTTGCAGTCCCAATTTTACTCCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CCA 90 bp GAAAAAGACTCTTCAGGAAAAATCTGCCACCACTGCCTGAGACCTCATAAGGGGAGAAGGCACCCTCACTaGGTCAGCACCTCATCCTTC +
Preference number: 4 (lower is better)
Translates to: EKDSSGKICHHCLRPHKGRRHPH*VSTSSF
Trigger: GAAGGATGAGGTGCTGACCCAGTGAGGGTGCCTTCT...CCCCTTATGAGGTCTCAGGCAGTGGTGGCAGATTTTTCCTGAAGAGTCTTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CCA 90 bp AACCCCATACAGAGTTGTGGTACCAAGGGTAGAGGTGATGTCCTTACTGGGATCCAATGCCAATGGCCGTaGGCACCAGAAGATGAAACC +
Preference number: 4 (lower is better)
Translates to: NPIQSCGTKGRGDVLTGIQCQWP*APEDET
Trigger: GGTTTCATCTTCTGGTGCCCACGGCCATTGGCATTG...GATCCCAGTAAGGACATCACCTCTACCCTTGGTACCACAACTCTGTATGGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CCA 90 bp GAAAAAGACTCTTCAGGAAAAATCTGCCACCACTGCCTGAGACCTCATAAGGGGGTGACCCTGAGTGGGTaGGAAATACACGGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: EKDSSGKICHHCLRPHKGVTLSG*EIHGVR
Trigger: CCTCACACCGTGTATTTCCCACCCACTCAGGGTCAC...CCCCTTATGAGGTCTCAGGCAGTGGTGGCAGATTTTTCCTGAAGAGTCTTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR TCA 90 bp ACTGGGATCAACGTCATCAGTGCTTCTGAAGAGATTCTTGAGATCCTTATAAGAAGGGCGGCCCCAGCCTaGACGGACAGGATCAGGAAT +
Preference number: 4 (lower is better)
Translates to: TGINVISASEEILEILIRRAAPA*TDRIRN
Trigger: ATTCCTGATCCTGTCCGTTCAGGCTGGGGCCGCCCT...TCTTATAAGGATCTCAAGAATCTCTTCAGAAGCACTGATGACGTTGATCCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296097.8
ENST00000402462.5
CDS-3UTR TCA 90 bp GCTCAGGGATCCTACCAGCTGGCATTGGTTCCAATAACAAGGCAGACACAGGAATTTGAAGTCTTCAGGTaGGGCGCCCTTCTTAAGATC +
Preference number: 4 (lower is better)
Translates to: AQGSYQLALVPITRQTQEFEVFR*GALLKI
Trigger: GATCTTAAGAAGGGCGCCTCACCTGAAGACTTCAAA...TTCCTGTGTCTGCCTTGTTATTGGAACCAATGCCAGCTGGTAGGATCCCTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR TCA 90 bp CCATACAGGCGTTATTGGCTTAGGAATGAGGCTGATGCTAGGGGTTCTTGGTACAGTTTCCTACCCAGGTaGTACTCAAAAGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: PYRRYWLRNEADARGSWYSFLPR*YSKGGW
Trigger: CCACCCTCCTTTTGAGTATCACCTGGGTAGGAAACT...GTACCAAGAACCCCTAGCATCAGCCTCATTCCTAAGCCAATAACGCCTGTATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296097.8
ENST00000402462.5
CDS-3UTR TCA 90 bp ACAGGATCCACCCTGCTCAGTTATCAGGCTCTTGGTGGTGATATCGCAAGGGGCCAGATATATTCCCAATaGGCCATGCTGGTCGTAAAT +
Preference number: 4 (lower is better)
Translates to: TGSTLLSYQALGGDIARGQIYSQ*AMLVVN
Trigger: ATTTACGACCAGCATGGCTCATTGGGAATATATCTG...GCCCCTTGCGATATCACCACCAAGAGCCTGATAACTGAGCAGGGTGGATCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
CDS-3UTR TCA 90 bp AGGGTAGAGGTGATGTCCTTACTGGGATCAACGTCATCAGTGCTTCTGAAGAGAATCACATTTGGCTCCTaGCCTTGGAGGCTGACTCTG +
Preference number: 4 (lower is better)
Translates to: RVEVMSLLGSTSSVLLKRITFGS*PWRLTL
Trigger: CAGAGTCAGCCTCCAAGGTCAGGAGCCAAATGTGAT...TCTCTTCAGAAGCACTGATGACGTTGATCCCAGTAAGGACATCACCTCTACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR TCA 90 bp GATGCTAGGGGTTCTTGGTACACAGAGTTGCAACAAGGGAGAATTAATGGGTGCATCACATTTGGCTCCTaGCCTTGGAGGCTGACTCTG +
Preference number: 4 (lower is better)
Translates to: DARGSWYTELQQGRINGCITFGS*PWRLTL
Trigger: CAGAGTCAGCCTCCAAGGTCAGGAGCCAAATGTGAT...GCACCCATTAATTCTCCCTTGTTGCAACTCTGTGTACCAAGAACCCCTAGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR TCA 90 bp GAAAAAGACTCTTCAGGAAAAATCTGCCACCACTGCCTGAGACCTCATAAGGGGGGGAGGGCTGCTTTCTaGCGGAGTAAAATTGGGACT +
Preference number: 4 (lower is better)
Translates to: EKDSSGKICHHCLRPHKGGRAAF*RSKIGT
Trigger: AGTCCCAATTTTACTCCGTCAGAAAGCAGCCCTCCC...CCCCTTATGAGGTCTCAGGCAGTGGTGGCAGATTTTTCCTGAAGAGTCTTTTTC
50% GC, longest homopolymer 7 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR TCA 90 bp GACACAGGAAAAAGACTCTTCAGGAAAAATCTGCCACCACTGCCTGAGACCTCAGGGAGGGCTGCTTTCTaGCGGAGTAAAATTGGGACT +
Preference number: 4 (lower is better)
Translates to: DTGKRLFRKNLPPLPETSGRAAF*RSKIGT
Trigger: AGTCCCAATTTTACTCCGTCAGAAAGCAGCCCTCCC...TGAGGTCTCAGGCAGTGGTGGCAGATTTTTCCTGAAGAGTCTTTTTCCTGTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR TCA 90 bp GTTATTGGCTTAGGAATGAGGCTGATGCTAGGGGTTCTTGGTACACAGAGTTGCGTGGGCACCAGAAGATaGAACCAACTCCATACAGGC +
Preference number: 4 (lower is better)
Translates to: VIGLGMRLMLGVLGTQSCVGTRR*NQLHTG
Trigger: GCCTGTATGGAGTTGGTTTCATCTTCTGGTGCCCAC...GCAACTCTGTGTACCAAGAACCCCTAGCATCAGCCTCATTCCTAAGCCAATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR TCA 90 bp GAATTAATGGGTGCAGCAGCTCCAGGGACAGGATCCACCCTGCTCAGTTATCAGGCTGGCACTGATGTTTaGACTTCAGTTAACCTACAG +
Preference number: 4 (lower is better)
Translates to: ELMGAAAPGTGSTLLSYQAGTDV*TSVNLQ
Trigger: CTGTAGGTTAACTGAAGTTCAAACATCAGTGCCAGC...CTGATAACTGAGCAGGGTGGATCCTGTCCCTGGAGCTGCTGCACCCATTAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR TCA 90 bp AACCCCATACAGAGTTGTGGTACCAAGGGTAGAGGTGATGTCCTTACTGGGATCGGGAAATACACGGTGTaGGGAGGATACGAAACAGCA +
Preference number: 4 (lower is better)
Translates to: NPIQSCGTKGRGDVLTGIGKYTV*GGYETA
Trigger: TGCTGTTTCGTATCCTCCTCACACCGTGTATTTCCC...GATCCCAGTAAGGACATCACCTCTACCCTTGGTACCACAACTCTGTATGGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR GCA 90 bp AACCAACTCCATACAGGCGTTATTGGCTTAGGAATGAGGCTGATGCTAGGGGTTCTTAAGCCAGGTGGGTaGCCTTCATCCTTTTGGGTG +
Preference number: 4 (lower is better)
Translates to: NQLHTGVIGLGMRLMLGVLKPGG*PSSFWV
Trigger: CACCCAAAAGGATGAAGGGCACCCACCTGGCTTAAG...AACCCCTAGCATCAGCCTCATTCCTAAGCCAATAACGCCTGTATGGAGTTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR GCA 90 bp CTAGGGGTTCTTGGTACACAGAGTTGCAACAAGGGAGAATTAATGGGTGCAGCACTTAAGCCAGGTGGGTaGCCTTCATCCTTTTGGGTG +
Preference number: 4 (lower is better)
Translates to: LGVLGTQSCNKGELMGAALKPGG*PSSFWV
Trigger: CACCCAAAAGGATGAAGGGCACCCACCTGGCTTAAG...TGCTGCACCCATTAATTCTCCCTTGTTGCAACTCTGTGTACCAAGAACCCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR GCA 90 bp TCAGGGATCCTACCAGCTGGCATTGGTTCCAATAACAAGGCAGACACAGGAAAAGGACAGCCGGTGTGCTaGTTCCTTCACAGTAGACAT +
Preference number: 4 (lower is better)
Translates to: SGILPAGIGSNNKADTGKGQPVC*FLHSRH
Trigger: ATGTCTACTGTGAAGGAAGCAGCACACCGGCTGTCC...TTTTCCTGTGTCTGCCTTGTTATTGGAACCAATGCCAGCTGGTAGGATCCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR GCA 90 bp GGGCACCAGAAGATGAAACCAACTCCATACAGGCGTTATTGGCTTAGGAATGAGGGACAGCCGGTGTGCTaGTTCCTTCACAGTAGACAT +
Preference number: 4 (lower is better)
Translates to: GHQKMKPTPYRRYWLRNEGQPVC*FLHSRH
Trigger: ATGTCTACTGTGAAGGAAGCAGCACACCGGCTGTCC...CTCATTCCTAAGCCAATAACGCCTGTATGGAGTTGGTTTCATCTTCTGGTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR GCA 90 bp GATCCACCCTGCTCAGTTATCAGGCTCTTGGTGGTGATATCGCAAGGGGCTCAGCTCTTTGAATATTTCTaGTGCTTGAGCATTCCCTGG +
Preference number: 4 (lower is better)
Translates to: DPPCSVIRLLVVISQGAQLFEYF*CLSIPW
Trigger: CCAGGGAATGCTCAAGCAGCAGAAATATTCAAAGAG...CTGAGCCCCTTGCGATATCACCACCAAGAGCCTGATAACTGAGCAGGGTGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
CDS-3UTR GCA 90 bp AATGGGTGCAGCAGCTCCAGGGACAGGATCCACCCTGCTCAGTTATCAGGCTCTCTTGGTACACAGAGTTaGAACAAGGGAGAATTAATG +
Preference number: 4 (lower is better)
Translates to: NGCSSSRDRIHPAQLSGSLGTQS*NKGELM
Trigger: CATTAATTCTCCCTTGTTGCAACTCTGTGTACCAAG...AGAGCCTGATAACTGAGCAGGGTGGATCCTGTCCCTGGAGCTGCTGCACCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR GCA 90 bp GGAAATACACGGTGTGAGGAGGATACGAAACAGCAGCACAAAGAGGCAAGAGTGCCCCTAAGCCTCAAATaGACTCGCAGTTTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: GNTRCEEDTKQQHKEARVPLSLK*TRSFPE
Trigger: CTCAGGAAAACTGCGAGTGCATTTGAGGCTTAGGGG...CACTCTTGCCTCTTTGTGCTGCTGTTTCGTATCCTCCTCACACCGTGTATTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CCA 90 bp GCCAATGGCCGTGGGCACCAGAAGATGAAACCAACTCCATACAGGCGTTATTGGGATGCTAGGGGTTCTTaGTACACAGAGTTGCAACAA +
Preference number: 4 (lower is better)
Translates to: ANGRGHQKMKPTPYRRYWDARGS*YTELQQ
Trigger: TTGTTGCAACTCTGTGTACCAAGAACCCCTAGCATC...CCAATAACGCCTGTATGGAGTTGGTTTCATCTTCTGGTGCCCACGGCCATTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CCA 90 bp TGTGACCCTGAGTGGGTGGGAAATACACGGTGTGAGGAGGATACGAAACAGCAGGATGCTAGGGGTTCTTaGTACACAGAGTTGCAACAA +
Preference number: 4 (lower is better)
Translates to: CDPEWVGNTRCEEDTKQQDARGS*YTELQQ
Trigger: TTGTTGCAACTCTGTGTACCAAGAACCCCTAGCATC...CTGCTGTTTCGTATCCTCCTCACACCGTGTATTTCCCACCCACTCAGGGTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CCA 90 bp GAATTAATGGGTGCAGCAGCTCCAGGGACAGGATCCACCCTGCTCAGTTATCAGCCATACAGGCGTTATTaGCTTAGGAATGAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: ELMGAAAPGTGSTLLSYQPYRRY*LRNEAD
Trigger: ATCAGCCTCATTCCTAAGCCAATAACGCCTGTATGG...CTGATAACTGAGCAGGGTGGATCCTGTCCCTGGAGCTGCTGCACCCATTAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CCA 90 bp CTAGGGGTTCTTGGTACACAGAGTTGCAACAAGGGAGAATTAATGGGTGCAGCACAATGCCAATGGCCGTaGGCACCAGAAGATGAAACC +
Preference number: 4 (lower is better)
Translates to: LGVLGTQSCNKGELMGAAQCQWP*APEDET
Trigger: GGTTTCATCTTCTGGTGCCCACGGCCATTGGCATTG...TGCTGCACCCATTAATTCTCCCTTGTTGCAACTCTGTGTACCAAGAACCCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR CAA 72 bp ATATCGCAAGGGGCTCAGGGATCCTACCAGCTGGCATaGGTTCCAATAACAAGGCAGACACAGGAAAAAGAC +
Preference number: 4 (lower is better)
Translates to: ISQGAQGSYQLA*VPITRQTQEKD
Trigger: GTCTTTTTCCTGTGTCTGCCTTGTTATTGGAACCAATGCCAGCTGGTAGGATCCCTGAGCCCCTTGCGATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
3UTR CAA 72 bp AATGAGGCTGATGCTAGGGGTTCTTGGTACACAGAGTaGCAACAAGGGAGAATTAATGGGTGCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: NEADARGSWYTE*QQGRINGCSSS
Trigger: GGAGCTGCTGCACCCATTAATTCTCCCTTGTTGCAACTCTGTGTACCAAGAACCCCTAGCATCAGCCTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR TCA 90 bp GATGTCCTTACTGGGATCAACGTCATCAGTGCTTCTGAAGAGATTCTTGAGATCTCATCCTTTTGGGTGTaGAACTTCACACCGGCCGGG +
Preference number: 4 (lower is better)
Translates to: DVLTGINVISASEEILEISSFWV*NFTPAG
Trigger: CCCGGCCGGTGTGAAGTTTCACACCCAAAAGGATGA...GATCTCAAGAATCTCTTCAGAAGCACTGATGACGTTGATCCCAGTAAGGACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR TCA 90 bp GAAAAAGACTCTTCAGGAAAAATCTGCCACCACTGCCTGAGACCTCATAAGGGGTCGCTCAGTATGGCATaGGCTGCGTTGATCTCTTTG +
Preference number: 4 (lower is better)
Translates to: EKDSSGKICHHCLRPHKGSLSMA*AALISL
Trigger: CAAAGAGATCAACGCAGCTCATGCCATACTGAGCGA...CCCCTTATGAGGTCTCAGGCAGTGGTGGCAGATTTTTCCTGAAGAGTCTTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
CDS-3UTR TCA 90 bp GAAAAAGACTCTTCAGGAAAAATCTGCCACCACTGCCTGAGACCTCATAAGGGGGGGAAATACACGGTGTaGGGAGGATACGAAACAGCA +
Preference number: 4 (lower is better)
Translates to: EKDSSGKICHHCLRPHKGGKYTV*GGYETA
Trigger: TGCTGTTTCGTATCCTCCTCACACCGTGTATTTCCC...CCCCTTATGAGGTCTCAGGCAGTGGTGGCAGATTTTTCCTGAAGAGTCTTTTTC
49% GC, longest homopolymer 7 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR TCA 90 bp GTTATTGGCTTAGGAATGAGGCTGATGCTAGGGGTTCTTGGTACACAGAGTTGCGGGAAATACACGGTGTaGGGAGGATACGAAACAGCA +
Preference number: 4 (lower is better)
Translates to: VIGLGMRLMLGVLGTQSCGKYTV*GGYETA
Trigger: TGCTGTTTCGTATCCTCCTCACACCGTGTATTTCCC...GCAACTCTGTGTACCAAGAACCCCTAGCATCAGCCTCATTCCTAAGCCAATAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR TCA 90 bp AATGTCAGGACAGGGCTACTTGCTCCTCTCTTCAATGTGTCCAGGGGACTGGGCTGCCTTGGGATTGGATaGAAGCTCTTTTATTTACTG +
Preference number: 4 (lower is better)
Translates to: NVRTGLLAPLFNVSRGLGCLGIG*KLFYLL
Trigger: CAGTAAATAAAAGAGCTTTCATCCAATCCCAAGGCA...GCCCAGTCCCCTGGACACATTGAAGAGAGGAGCAAGTAGCCCTGTCCTGACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296097.8
ENST00000406962.1
CDS-3UTR GCA 90 bp TGGCTTAGGAATGAGGCTGATGCTAGGGGTTCTTGGTACACAGAGTTGCAACAAAGGGTGGGGAAGCAATaGGGAATGGCTGTAGGATTT +
Preference number: 4 (lower is better)
Translates to: WLRNEADARGSWYTELQQRVGKQ*GMAVGF
Trigger: AAATCCTACAGCCATTCCGCATTGCTTCCCCACCCT...TTGTTGCAACTCTGTGTACCAAGAACCCCTAGCATCAGCCTCATTCCTAAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296097.8
ENST00000402462.5
CDS-3UTR GCA 90 bp ACAGGATCCACCCTGCTCAGTTATCAGGCTCTTGGTGGTGATATCGCAAGGGGCCAGTATGGCATGAGCTaGGTTGATCTCTTTGAATAT +
Preference number: 4 (lower is better)
Translates to: TGSTLLSYQALGGDIARGQYGMS*VDLFEY
Trigger: ATATTCAAAGAGATCAACGCAGCTCATGCCATACTG...GCCCCTTGCGATATCACCACCAAGAGCCTGATAACTGAGCAGGGTGGATCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
CDS-3UTR GCA 90 bp GACACAGGAAAAAGACTCTTCAGGAAAAATCTGCCACCACTGCCTGAGACCTCACAGGACAGGGCTACTTaGTCCTCTCTTCAATGTGTC +
Preference number: 4 (lower is better)
Translates to: DTGKRLFRKNLPPLPETSQDRAT*SSLQCV
Trigger: GACACATTGAAGAGAGGAGCAAGTAGCCCTGTCCTG...TGAGGTCTCAGGCAGTGGTGGCAGATTTTTCCTGAAGAGTCTTTTTCCTGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CCA 90 bp GAATTAGTAGGCTGTGACCCTGAGTGGGTGGGAAATACACGGTGTGAGGAGGATACAGTAGACATGATCTaGAGTAAACACCTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: ELVGCDPEWVGNTRCEEDTVDMI*SKHLWV
Trigger: GACCCAGAGGTGTTTACTCCAGATCATGTCTACTGT...ATCCTCCTCACACCGTGTATTTCCCACCCACTCAGGGTCACAGCCTACTAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296097.8
ENST00000402462.5
CDS-3UTR CCA 90 bp ATGAGGCTGATGCTAGGGGTTCTTGGTACACAGAGTTGCAACAAGGGAGAATTAGGCTCATCTCACTTTTaGACAGCCGGTGTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: MRLMLGVLGTQSCNKGELGSSHF*TAGVLL
Trigger: AAGCAGCACACCGGCTGTCCAAAAGTGAGATGAGCC...TAATTCTCCCTTGTTGCAACTCTGTGTACCAAGAACCCCTAGCATCAGCCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CCA 90 bp CTACCCCTAAGCCTCAAATGCACTCGCAGTTTTCCTGAGTTGACTCATAGTGGCACTATCCTGCTCAGGTaGTGGTTTAAGTGCTCCACA +
Preference number: 4 (lower is better)
Translates to: LPLSLKCTRSFPELTHSGTILLR*WFKCST
Trigger: TGTGGAGCACTTAAACCACCACCTGAGCAGGATAGT...GCCACTATGAGTCAACTCAGGAAAACTGCGAGTGCATTTGAGGCTTAGGGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CCA 90 bp GCTAGGGGTTCTTGGTACACAGAGTTGCAACAAGGGAGAATTAATGGGTGCAGCACTATCCTGCTCAGGTaGTGGTTTAAGTGCTCCACA +
Preference number: 4 (lower is better)
Translates to: ARGSWYTELQQGRINGCSTILLR*WFKCST
Trigger: TGTGGAGCACTTAAACCACCACCTGAGCAGGATAGT...GCTGCACCCATTAATTCTCCCTTGTTGCAACTCTGTGTACCAAGAACCCCTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CCA 90 bp GATGTCCTTACTGGGATCAACGTCATCAGTGCTTCTGAAGAGATTCTTGAGATCAGAAGGCACCCTCACTaGGTCAGCACCTCATCCTTC +
Preference number: 4 (lower is better)
Translates to: DVLTGINVISASEEILEIRRHPH*VSTSSF
Trigger: GAAGGATGAGGTGCTGACCCAGTGAGGGTGCCTTCT...GATCTCAAGAATCTCTTCAGAAGCACTGATGACGTTGATCCCAGTAAGGACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CCA 90 bp CAGAAGATGAAACCAACTCCATACAGGCGTTATTGGCTTAGGAATGAGGCTGATAGAAGGCACCCTCACTaGGTCAGCACCTCATCCTTC +
Preference number: 4 (lower is better)
Translates to: QKMKPTPYRRYWLRNEADRRHPH*VSTSSF
Trigger: GAAGGATGAGGTGCTGACCCAGTGAGGGTGCCTTCT...ATCAGCCTCATTCCTAAGCCAATAACGCCTGTATGGAGTTGGTTTCATCTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CCA 90 bp GATCCTTATAAGAAGAGGGGTCAAATCAGGGTCAATGTCAGGACAGGGCTACTTCAATGCCAATGGCCGTaGGCACCAGAAGATGAAACC +
Preference number: 4 (lower is better)
Translates to: DPYKKRGQIRVNVRTGLLQCQWP*APEDET
Trigger: GGTTTCATCTTCTGGTGCCCACGGCCATTGGCATTG...AAGTAGCCCTGTCCTGACATTGACCCTGATTTGACCCCTCTTCTTATAAGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CCA 90 bp GAGATTCTTGAGATCCTTATAAGAAGAGGGGTCAAATCAGGGTCAATGTCAGGAGGCTGGCAATGCCAATaGCCGTGGGCACCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: EILEILIRRGVKSGSMSGGWQCQ*PWAPED
Trigger: ATCTTCTGGTGCCCACGGCCATTGGCATTGCCAGCC...TCCTGACATTGACCCTGATTTGACCCCTCTTCTTATAAGGATCTCAAGAATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR TCA 90 bp TCAGGGATCCTACCAGCTGGCATTGGTTCCAATAACAAGGCAGACACAGGAAAATTTGAAGTCTTCAGGTaGGGCGCCCTTCTTAAGATC +
Preference number: 4 (lower is better)
Translates to: SGILPAGIGSNNKADTGKFEVFR*GALLKI
Trigger: GATCTTAAGAAGGGCGCCTCACCTGAAGACTTCAAA...TTTTCCTGTGTCTGCCTTGTTATTGGAACCAATGCCAGCTGGTAGGATCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR TCA 90 bp TCCTACCAGCTGGCATTGGTTCCAATAACAAGGCAGACACAGGAAAAAGACTCTTCGCTCAGTATGGCATaGGCTGCGTTGATCTCTTTG +
Preference number: 4 (lower is better)
Translates to: SYQLALVPITRQTQEKDSSLSMA*AALISL
Trigger: CAAAGAGATCAACGCAGCTCATGCCATACTGAGCGA...AGAGTCTTTTTCCTGTGTCTGCCTTGTTATTGGAACCAATGCCAGCTGGTAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
CDS-3UTR TCA 90 bp CTGAGTGGGTGGGAAATACACGGTGTGAGGAGGATACGAAACAGCAGCACAAAGCAGATATATTCCCAATaGGCCATGCTGGTCGTAAAT +
Preference number: 4 (lower is better)
Translates to: LSGWEIHGVRRIRNSSTKQIYSQ*AMLVVN
Trigger: ATTTACGACCAGCATGGCTCATTGGGAATATATCTG...CTTTGTGCTGCTGTTTCGTATCCTCCTCACACCGTGTATTTCCCACCCACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
CDS-3UTR TCA 90 bp AGGGGCTCAGGGATCCTACCAGCTGGCATTGGTTCCAATAACAAGGCAGACACAAATCTAAAGATGGAATaGCTACCCCTAAGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: RGSGILPAGIGSNNKADTNLKME*LPLSLK
Trigger: TTTGAGGCTTAGGGGTAGTCATTCCATCTTTAGATT...TGTGTCTGCCTTGTTATTGGAACCAATGCCAGCTGGTAGGATCCCTGAGCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR TCA 90 bp CTGCAACTGAAAGGAAGAGTAGCTGGGCAACCCCATACAGAGTTGTGGTACCAAGCTGGCACTGATGTTTaGACTTCAGTTAACCTACAG +
Preference number: 4 (lower is better)
Translates to: LQLKGRVAGQPHTELWYQAGTDV*TSVNLQ
Trigger: CTGTAGGTTAACTGAAGTTCAAACATCAGTGCCAGC...TTGGTACCACAACTCTGTATGGGGTTGCCCAGCTACTCTTCCTTTCAGTTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR GCA 90 bp AGTAAAATTGGGACTGCAACTGAAAGGAAGAGTAGCTGGGCAACCCCATACAGAAAAATCTGCCACCACTaGCTGAGACCTCATAAGGGG +
Preference number: 4 (lower is better)
Translates to: SKIGTATERKSSWATPYRKICHH*LRPHKG
Trigger: CCCCTTATGAGGTCTCAGGCAGTGGTGGCAGATTTT...TCTGTATGGGGTTGCCCAGCTACTCTTCCTTTCAGTTGCAGTCCCAATTTTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR GCA 90 bp GCCAATGGCCGTGGGCACCAGAAGATGAAACCAACTCCATACAGGCGTTATTGGCTTGGTACACAGAGTTaGAACAAGGGAGAATTAATG +
Preference number: 4 (lower is better)
Translates to: ANGRGHQKMKPTPYRRYWLGTQS*NKGELM
Trigger: CATTAATTCTCCCTTGTTGCAACTCTGTGTACCAAG...CCAATAACGCCTGTATGGAGTTGGTTTCATCTTCTGGTGCCCACGGCCATTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CCA 90 bp CTACCCCTAAGCCTCAAATGCACTCGCAGTTTTCCTGAGTTGACTCATAGTGGCTGCTTGAGCATTCCCTaGATTCTTGTCGGGATGATA +
Preference number: 4 (lower is better)
Translates to: LPLSLKCTRSFPELTHSGCLSIP*ILVGMI
Trigger: TATCATCCCGACAAGAATCCAGGGAATGCTCAAGCA...GCCACTATGAGTCAACTCAGGAAAACTGCGAGTGCATTTGAGGCTTAGGGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
CDS-3UTR CCA 90 bp CTTAGGAATGAGGCTGATGCTAGGGGTTCTTGGTACACAGAGTTGCAACAAGGGCCATACAGGCGTTATTaGCTTAGGAATGAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: LRNEADARGSWYTELQQGPYRRY*LRNEAD
Trigger: ATCAGCCTCATTCCTAAGCCAATAACGCCTGTATGG...CCCTTGTTGCAACTCTGTGTACCAAGAACCCCTAGCATCAGCCTCATTCCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR TCA 90 bp ATTGGGACTGCAACTGAAAGGAAGAGTAGCTGGGCAACCCCATACAGAGTTGTGAATATTTCTGCTGCTTaGGCATTCCCTGGATTCTTG +
Preference number: 4 (lower is better)
Translates to: IGTATERKSSWATPYRVVNISAA*AFPGFL
Trigger: CAAGAATCCAGGGAATGCTCAAGCAGCAGAAATATT...CACAACTCTGTATGGGGTTGCCCAGCTACTCTTCCTTTCAGTTGCAGTCCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
CDS-3UTR TCA 90 bp AACCCCATACAGAGTTGTGGTACCAAGGGTAGAGGTGATGTCCTTACTGGGATCCAGATATATTCCCAATaGGCCATGCTGGTCGTAAAT +
Preference number: 4 (lower is better)
Translates to: NPIQSCGTKGRGDVLTGIQIYSQ*AMLVVN
Trigger: ATTTACGACCAGCATGGCTCATTGGGAATATATCTG...GATCCCAGTAAGGACATCACCTCTACCCTTGGTACCACAACTCTGTATGGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
CDS-3UTR TCA 90 bp GAGATTCTTGAGATCCTTATAAGAAGAGGGGTCAAATCAGGGTCAATGTCAGGAGTGGGCACCAGAAGATaGAACCAACTCCATACAGGC +
Preference number: 4 (lower is better)
Translates to: EILEILIRRGVKSGSMSGVGTRR*NQLHTG
Trigger: GCCTGTATGGAGTTGGTTTCATCTTCTGGTGCCCAC...TCCTGACATTGACCCTGATTTGACCCCTCTTCTTATAAGGATCTCAAGAATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR TCA 90 bp GGGGTCAAATCAGGGTCAATGTCAGGACAGGGCTACTTGCTCCTCTCTTCAATGTGCCTTGGGATTGGATaGAAGCTCTTTTATTTACTG +
Preference number: 4 (lower is better)
Translates to: GVKSGSMSGQGYLLLSSMCLGIG*KLFYLL
Trigger: CAGTAAATAAAAGAGCTTTCATCCAATCCCAAGGCA...CATTGAAGAGAGGAGCAAGTAGCCCTGTCCTGACATTGACCCTGATTTGACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296097.8
ENST00000406962.1
CDS-3UTR GCA 90 bp GAGATTCTTGAGATCCTTATAAGAAGAGGGGTCAAATCAGGGTCAATGTCAGGAGGACAGCCGGTGTGCTaGTTCCTTCACAGTAGACAT +
Preference number: 4 (lower is better)
Translates to: EILEILIRRGVKSGSMSGGQPVC*FLHSRH
Trigger: ATGTCTACTGTGAAGGAAGCAGCACACCGGCTGTCC...TCCTGACATTGACCCTGATTTGACCCCTCTTCTTATAAGGATCTCAAGAATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR GCA 90 bp GTTATTGGCTTAGGAATGAGGCTGATGCTAGGGGTTCTTGGTACACAGAGTTGCCTTAAGATCCAGCACTaGATAGAGGCTCATCTCACT +
Preference number: 4 (lower is better)
Translates to: VIGLGMRLMLGVLGTQSCLKIQH*IEAHLT
Trigger: AGTGAGATGAGCCTCTATGCAGTGCTGGATCTTAAG...GCAACTCTGTGTACCAAGAACCCCTAGCATCAGCCTCATTCCTAAGCCAATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR GCA 90 bp TGCTCAGTTATCAGGCTCTTGGTGGTGATATCGCAAGGGGCTCAGGGATCCTACTTTGAATATTTCTGCTaGTTGAGCATTCCCTGGATT +
Preference number: 4 (lower is better)
Translates to: CSVIRLLVVISQGAQGSYFEYFC*LSIPWI
Trigger: AATCCAGGGAATGCTCAAGCAGCAGAAATATTCAAA...GTAGGATCCCTGAGCCCCTTGCGATATCACCACCAAGAGCCTGATAACTGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
CDS-3UTR GCA 90 bp GATGTCCTTACTGGGATCAACGTCATCAGTGCTTCTGAAGAGATTCTTGAGATCAAAATCTGCCACCACTaGCTGAGACCTCATAAGGGG +
Preference number: 4 (lower is better)
Translates to: DVLTGINVISASEEILEIKICHH*LRPHKG
Trigger: CCCCTTATGAGGTCTCAGGCAGTGGTGGCAGATTTT...GATCTCAAGAATCTCTTCAGAAGCACTGATGACGTTGATCCCAGTAAGGACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CCA 90 bp ATACAGAGTTGTGGTACCAAGGGTAGAGGTGATGTCCTTACTGGGATCAACGTCACAGTAGACATGATCTaGAGTAAACACCTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: IQSCGTKGRGDVLTGINVTVDMI*SKHLWV
Trigger: GACCCAGAGGTGTTTACTCCAGATCATGTCTACTGT...GACGTTGATCCCAGTAAGGACATCACCTCTACCCTTGGTACCACAACTCTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296097.8
ENST00000402462.5
CDS-3UTR CCA 90 bp CTAGGGGTTCTTGGTACACAGAGTTGCAACAAGGGAGAATTAATGGGTGCAGCATGCTTGAGCATTCCCTaGATTCTTGTCGGGATGATA +
Preference number: 4 (lower is better)
Translates to: LGVLGTQSCNKGELMGAACLSIP*ILVGMI
Trigger: TATCATCCCGACAAGAATCCAGGGAATGCTCAAGCA...TGCTGCACCCATTAATTCTCCCTTGTTGCAACTCTGTGTACCAAGAACCCCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
CDS-3UTR CCA 90 bp TTTGAACTTCAGTTAACCTACAGGACCAAGGCTAATGCATGCTGTGCTGGTAGCACTATCCTGCTCAGGTaGTGGTTTAAGTGCTCCACA +
Preference number: 4 (lower is better)
Translates to: FELQLTYRTKANACCAGSTILLR*WFKCST
Trigger: TGTGGAGCACTTAAACCACCACCTGAGCAGGATAGT...GCTACCAGCACAGCATGCATTAGCCTTGGTCCTGTAGGTTAACTGAAGTTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CCA 90 bp GACACAGGAAAAAGACTCTTCAGGAAAAATCTGCCACCACTGCCTGAGACCTCACCATACAGGCGTTATTaGCTTAGGAATGAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: DTGKRLFRKNLPPLPETSPYRRY*LRNEAD
Trigger: ATCAGCCTCATTCCTAAGCCAATAACGCCTGTATGG...TGAGGTCTCAGGCAGTGGTGGCAGATTTTTCCTGAAGAGTCTTTTTCCTGTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR TCA 90 bp ATACAGAGTTGTGGTACCAAGGGTAGAGGTGATGTCCTTACTGGGATCAACGTCAATATTTCTGCTGCTTaGGCATTCCCTGGATTCTTG +
Preference number: 4 (lower is better)
Translates to: IQSCGTKGRGDVLTGINVNISAA*AFPGFL
Trigger: CAAGAATCCAGGGAATGCTCAAGCAGCAGAAATATT...GACGTTGATCCCAGTAAGGACATCACCTCTACCCTTGGTACCACAACTCTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
CDS-3UTR TCA 90 bp GAAGAGATTCTTGAGATCCTTATAAGAAGAGGGGTCAAATCAGGGTCAATGTCAGTGGGCACCAGAAGATaGAACCAACTCCATACAGGC +
Preference number: 4 (lower is better)
Translates to: EEILEILIRRGVKSGSMSVGTRR*NQLHTG
Trigger: GCCTGTATGGAGTTGGTTTCATCTTCTGGTGCCCAC...TGACATTGACCCTGATTTGACCCCTCTTCTTATAAGGATCTCAAGAATCTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR GCA 90 bp TTTGAACTTCAGTTAACCTACAGGACCAAGGCTAATGCATGCTGTGCTGGTAGCCTTAAGATCCAGCACTaGATAGAGGCTCATCTCACT +
Preference number: 4 (lower is better)
Translates to: FELQLTYRTKANACCAGSLKIQH*IEAHLT
Trigger: AGTGAGATGAGCCTCTATGCAGTGCTGGATCTTAAG...GCTACCAGCACAGCATGCATTAGCCTTGGTCCTGTAGGTTAACTGAAGTTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR GCA 90 bp AGGGGAGGGCTGCTTTCTGACGGAGTAAAATTGGGACTGCAACTGAAAGGAAGACAGTATGGCATGAGCTaGGTTGATCTCTTTGAATAT +
Preference number: 4 (lower is better)
Translates to: RGGLLSDGVKLGLQLKGRQYGMS*VDLFEY
Trigger: ATATTCAAAGAGATCAACGCAGCTCATGCCATACTG...TCTTCCTTTCAGTTGCAGTCCCAATTTTACTCCGTCAGAAAGCAGCCCTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
CDS-3UTR GCA 90 bp ATCAGTGCTTCTGAAGAGATTCTTGAGATCCTTATAAGAAGAGGGGTCAAATCAGGGAGAATTAATGGGTaGAGCAGCTCCAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: ISASEEILEILIRRGVKSGRING*SSSRDR
Trigger: CCTGTCCCTGGAGCTGCTGCACCCATTAATTCTCCC...TGATTTGACCCCTCTTCTTATAAGGATCTCAAGAATCTCTTCAGAAGCACTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR GCA 90 bp AGGGGAGGGCTGCTTTCTGACGGAGTAAAATTGGGACTGCAACTGAAAGGAAGACTTGGTACACAGAGTTaGAACAAGGGAGAATTAATG +
Preference number: 4 (lower is better)
Translates to: RGGLLSDGVKLGLQLKGRLGTQS*NKGELM
Trigger: CATTAATTCTCCCTTGTTGCAACTCTGTGTACCAAG...TCTTCCTTTCAGTTGCAGTCCCAATTTTACTCCGTCAGAAAGCAGCCCTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CCA 90 bp AGTAAAATTGGGACTGCAACTGAAAGGAAGAGTAGCTGGGCAACCCCATACAGATGCTTGAGCATTCCCTaGATTCTTGTCGGGATGATA +
Preference number: 4 (lower is better)
Translates to: SKIGTATERKSSWATPYRCLSIP*ILVGMI
Trigger: TATCATCCCGACAAGAATCCAGGGAATGCTCAAGCA...TCTGTATGGGGTTGCCCAGCTACTCTTCCTTTCAGTTGCAGTCCCAATTTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
CDS-3UTR TCA 90 bp TGGCTTAGGAATGAGGCTGATGCTAGGGGTTCTTGGTACACAGAGTTGCAACAAAATCTAAAGATGGAATaGCTACCCCTAAGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: WLRNEADARGSWYTELQQNLKME*LPLSLK
Trigger: TTTGAGGCTTAGGGGTAGTCATTCCATCTTTAGATT...TTGTTGCAACTCTGTGTACCAAGAACCCCTAGCATCAGCCTCATTCCTAAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR TCA 90 bp GATGCTAGGGGTTCTTGGTACACAGAGTTGCAACAAGGGAGAATTAATGGGTGCAATCTAAAGATGGAATaGCTACCCCTAAGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: DARGSWYTELQQGRINGCNLKME*LPLSLK
Trigger: TTTGAGGCTTAGGGGTAGTCATTCCATCTTTAGATT...GCACCCATTAATTCTCCCTTGTTGCAACTCTGTGTACCAAGAACCCCTAGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR TCA 90 bp TCAGGGATCCTACCAGCTGGCATTGGTTCCAATAACAAGGCAGACACAGGAAAAAATCTAAAGATGGAATaGCTACCCCTAAGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: SGILPAGIGSNNKADTGKNLKME*LPLSLK
Trigger: TTTGAGGCTTAGGGGTAGTCATTCCATCTTTAGATT...TTTTCCTGTGTCTGCCTTGTTATTGGAACCAATGCCAGCTGGTAGGATCCCTGA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR GCA 90 bp CCATACAGGCGTTATTGGCTTAGGAATGAGGCTGATGCTAGGGGTTCTTGGTACTTTGAATATTTCTGCTaGTTGAGCATTCCCTGGATT +
Preference number: 4 (lower is better)
Translates to: PYRRYWLRNEADARGSWYFEYFC*LSIPWI
Trigger: AATCCAGGGAATGCTCAAGCAGCAGAAATATTCAAA...GTACCAAGAACCCCTAGCATCAGCCTCATTCCTAAGCCAATAACGCCTGTATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
CDS-3UTR GCA 90 bp AAATCAGGGTCAATGTCAGGACAGGGCTACTTGCTCCTCTCTTCAATGTGTCCACTTGGTACACAGAGTTaGAACAAGGGAGAATTAATG +
Preference number: 4 (lower is better)
Translates to: KSGSMSGQGYLLLSSMCPLGTQS*NKGELM
Trigger: CATTAATTCTCCCTTGTTGCAACTCTGTGTACCAAG...TGGACACATTGAAGAGAGGAGCAAGTAGCCCTGTCCTGACATTGACCCTGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR GCA 90 bp TCCTACCAGCTGGCATTGGTTCCAATAACAAGGCAGACACAGGAAAAAGACTCTCAGTATGGCATGAGCTaGGTTGATCTCTTTGAATAT +
Preference number: 4 (lower is better)
Translates to: SYQLALVPITRQTQEKDSQYGMS*VDLFEY
Trigger: ATATTCAAAGAGATCAACGCAGCTCATGCCATACTG...AGAGTCTTTTTCCTGTGTCTGCCTTGTTATTGGAACCAATGCCAGCTGGTAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
CDS-3UTR GCA 90 bp ATCAGTGCTTCTGAAGAGATTCTTGAGATCCTTATAAGAAGAGGGGTCAAATCAAAAATCTGCCACCACTaGCTGAGACCTCATAAGGGG +
Preference number: 4 (lower is better)
Translates to: ISASEEILEILIRRGVKSKICHH*LRPHKG
Trigger: CCCCTTATGAGGTCTCAGGCAGTGGTGGCAGATTTT...TGATTTGACCCCTCTTCTTATAAGGATCTCAAGAATCTCTTCAGAAGCACTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR GCA 90 bp ATAATATGTGAAAAGGATGGAGGCAAGCTGGCACTGATGTTTGAACTTCAGTTACCCCTAAGCCTCAAATaGACTCGCAGTTTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: IICEKDGGKLALMFELQLPLSLK*TRSFPE
Trigger: CTCAGGAAAACTGCGAGTGCATTTGAGGCTTAGGGG...TAACTGAAGTTCAAACATCAGTGCCAGCTTGCCTCCATCCTTTTCACATATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CCA 90 bp CTCTTTTATTTACTGACATTCTTTAGCCTTTCTCCTAGTCCAGGGAGAGAAGTTTACTCAAAAGGAGGGTaGGGAAGCAATGCGGAATGG +
Preference number: 4 (lower is better)
Translates to: LFYLLTFFSLSPSPGREVYSKGG*GSNAEW
Trigger: CCATTCCGCATTGCTTCCCCACCCTCCTTTTGAGTA...AACTTCTCTCCCTGGACTAGGAGAAAGGCTAAAGAATGTCAGTAAATAAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296097.8
ENST00000402462.5
CDS-3UTR TCA 90 bp ATAATATGTGAAAAGGATGGAGGCAAGCTGGCACTGATGTTTGAACTTCAGTTATTTGAAGTCTTCAGGTaGGGCGCCCTTCTTAAGATC +
Preference number: 4 (lower is better)
Translates to: IICEKDGGKLALMFELQLFEVFR*GALLKI
Trigger: GATCTTAAGAAGGGCGCCTCACCTGAAGACTTCAAA...TAACTGAAGTTCAAACATCAGTGCCAGCTTGCCTCCATCCTTTTCACATATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR GCA 90 bp ACTGGGATCAACGTCATCAGTGCTTCTGAAGAGATTCTTGAGATCCTTATAAGACTTAAGATCCAGCACTaGATAGAGGCTCATCTCACT +
Preference number: 4 (lower is better)
Translates to: TGINVISASEEILEILIRLKIQH*IEAHLT
Trigger: AGTGAGATGAGCCTCTATGCAGTGCTGGATCTTAAG...TCTTATAAGGATCTCAAGAATCTCTTCAGAAGCACTGATGACGTTGATCCCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR TCA 90 bp CTCTTTTATTTACTGACATTCTTTAGCCTTTCTCCTAGTCCAGGGAGAGAAGTTGCTGGCACTGATGTTTaGACTTCAGTTAACCTACAG +
Preference number: 4 (lower is better)
Translates to: LFYLLTFFSLSPSPGREVAGTDV*TSVNLQ
Trigger: CTGTAGGTTAACTGAAGTTCAAACATCAGTGCCAGC...AACTTCTCTCCCTGGACTAGGAGAAAGGCTAAAGAATGTCAGTAAATAAAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CCA 90 bp ATCAGTGCTTCTGAAGAGATTCTTGAGATCCTTATAAGAAGAGGGGTCAAATCAGATGCTAGGGGTTCTTaGTACACAGAGTTGCAACAA +
Preference number: 4 (lower is better)
Translates to: ISASEEILEILIRRGVKSDARGS*YTELQQ
Trigger: TTGTTGCAACTCTGTGTACCAAGAACCCCTAGCATC...TGATTTGACCCCTCTTCTTATAAGGATCTCAAGAATCTCTTCAGAAGCACTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CCA 90 bp ATAATATGTGAAAAGGATGGAGGCAAGCTGGCACTGATGTTTGAACTTCAGTTAGATGCTAGGGGTTCTTaGTACACAGAGTTGCAACAA +
Preference number: 4 (lower is better)
Translates to: IICEKDGGKLALMFELQLDARGS*YTELQQ
Trigger: TTGTTGCAACTCTGTGTACCAAGAACCCCTAGCATC...TAACTGAAGTTCAAACATCAGTGCCAGCTTGCCTCCATCCTTTTCACATATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR GCA 90 bp CTCTTTTATTTACTGACATTCTTTAGCCTTTCTCCTAGTCCAGGGAGAGAAGTTTTTGAATATTTCTGCTaGTTGAGCATTCCCTGGATT +
Preference number: 4 (lower is better)
Translates to: LFYLLTFFSLSPSPGREVFEYFC*LSIPWI
Trigger: AATCCAGGGAATGCTCAAGCAGCAGAAATATTCAAA...AACTTCTCTCCCTGGACTAGGAGAAAGGCTAAAGAATGTCAGTAAATAAAAGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
CDS-3UTR CAA 90 bp AAGAAGAGGGGTCAAATCAGGGTCAATGTCAGGACAGGGCTACTTGCTCCTCTCGGCCGGGTCCAGCAGTaGACTGCGCTTGTGCGCAGC +
Preference number: 5 (lower is better)
Translates to: KKRGQIRVNVRTGLLAPLGRVQQ*TALVRS
Trigger: GCTGCGCACAAGCGCAGTCAACTGCTGGACCCGGCC...GAGAGGAGCAAGTAGCCCTGTCCTGACATTGACCCTGATTTGACCCCTCTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296097.8
CDS-3UTR CAA 90 bp ACAGGATCCACCCTGCTCAGTTATCAGGCTCTTGGTGGTGATATCGCAAGGGGCAGCTCACTGCTGGGTTaGAAAGACCAGGGCGGCCCC +
Preference number: 5 (lower is better)
Translates to: TGSTLLSYQALGGDIARGSSLLG*KDQGGP
Trigger: GGGGCCGCCCTGGTCTTTCAAACCCAGCAGTGAGCT...GCCCCTTGCGATATCACCACCAAGAGCCTGATAACTGAGCAGGGTGGATCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296097.8
ENST00000402462.5
CDS-3UTR CAA 90 bp GTGCAGCAGCTCCAGGGACAGGATCCACCCTGCTCAGTTATCAGGCTCTTGGTGAGGCTCATCTCACTTTaGGACAGCCGGTGTGCTGCT +
Preference number: 5 (lower is better)
Translates to: VQQLQGQDPPCSVIRLLVRLISL*DSRCAA
Trigger: AGCAGCACACCGGCTGTCCAAAAGTGAGATGAGCCT...CACCAAGAGCCTGATAACTGAGCAGGGTGGATCCTGTCCCTGGAGCTGCTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CAA 90 bp CACGGTGTGAGGAGGATACGAAACAGCAGCACAAAGAGGCAAGAGTGGGAAAAGAGCTCACTGCTGGGTTaGAAAGACCAGGGCGGCCCC +
Preference number: 5 (lower is better)
Translates to: HGVRRIRNSSTKRQEWEKSSLLG*KDQGGP
Trigger: GGGGCCGCCCTGGTCTTTCAAACCCAGCAGTGAGCT...CTTTTCCCACTCTTGCCTCTTTGTGCTGCTGTTTCGTATCCTCCTCACACCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296097.8
ENST00000402462.5
CDS-3UTR CAA 90 bp GTGCAGCAGCTCCAGGGACAGGATCCACCCTGCTCAGTTATCAGGCTCTTGGTGGTGCCCTTCATCCTTTaGGGTGTGAAACTTCACACC +
Preference number: 5 (lower is better)
Translates to: VQQLQGQDPPCSVIRLLVVPFIL*GVKLHT
Trigger: GGTGTGAAGTTTCACACCCAAAAGGATGAAGGGCAC...CACCAAGAGCCTGATAACTGAGCAGGGTGGATCCTGTCCCTGGAGCTGCTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CAA 90 bp AACAAGGGAGAATTAATGGGTGCAGCAGCTCCAGGGACAGGATCCACCCTGCTCAGGCTCATCTCACTTTaGGACAGCCGGTGTGCTGCT +
Preference number: 5 (lower is better)
Translates to: NKGELMGAAAPGTGSTLLRLISL*DSRCAA
Trigger: AGCAGCACACCGGCTGTCCAAAAGTGAGATGAGCCT...GAGCAGGGTGGATCCTGTCCCTGGAGCTGCTGCACCCATTAATTCTCCCTTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CAA 90 bp GTGCAGCAGCTCCAGGGACAGGATCCACCCTGCTCAGTTATCAGGCTCTTGGTGTCAGGACAGGGCTACTaGCTCCTCTCTTCAATGTGT +
Preference number: 5 (lower is better)
Translates to: VQQLQGQDPPCSVIRLLVSGQGY*LLSSMC
Trigger: ACACATTGAAGAGAGGAGCAAGTAGCCCTGTCCTGA...CACCAAGAGCCTGATAACTGAGCAGGGTGGATCCTGTCCCTGGAGCTGCTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CAA 90 bp ACAGGATCCACCCTGCTCAGTTATCAGGCTCTTGGTGGTGATATCGCAAGGGGCATTTGGCTCCTGACCTaGGAGGCTGACTCTGGACAT +
Preference number: 5 (lower is better)
Translates to: TGSTLLSYQALGGDIARGIWLLT*EADSGH
Trigger: ATGTCCAGAGTCAGCCTCCAAGGTCAGGAGCCAAAT...GCCCCTTGCGATATCACCACCAAGAGCCTGATAACTGAGCAGGGTGGATCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CAA 90 bp GGCTACTTGCTCCTCTCTTCAATGTGTCCAGGGGACTGGGCAGCAGAAGGCACCCTTCTAAAATCACATTaGGCTCCTGACCTTGGAGGC +
Preference number: 5 (lower is better)
Translates to: GYLLLSSMCPGDWAAEGTLLKSH*APDLGG
Trigger: GCCTCCAAGGTCAGGAGCCAAATGTGATTTTAGAAG...GGTGCCTTCTGCTGCCCAGTCCCCTGGACACATTGAAGAGAGGAGCAAGTAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CAA 90 bp CAAGGGAGAATTAATGGGTGCAGCAGCTCCAGGGACAGGATCCACCCTGCTCAGTCCTACCAGCTGGCATaGGTTCCAATAACAAGGCAG +
Preference number: 5 (lower is better)
Translates to: QGRINGCSSSRDRIHPAQSYQLA*VPITRQ
Trigger: CTGCCTTGTTATTGGAACCAATGCCAGCTGGTAGGA...CTGAGCAGGGTGGATCCTGTCCCTGGAGCTGCTGCACCCATTAATTCTCCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS GCA 90 bp CAGCACTGCATAGAGGCTCATCTCACTTTTGGACAGCCGGTGTGCTaGTTCCTTCACAGTAGACATGATCTGAGCCAGAGGAGAAGCAGC +
Preference number: 5 (lower is better)
Translates to: QHCIEAHLTFGQPVC*FLHSRHDLSQRRSS
Trigger: GCTGCTTCTCCTCTGGCTCAGATCATGTCTACTGTGAAGGAAGCAGCACACCGGCTGTCCAAAAGTGAGATGAGCCTCTATGCAGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CAA 90 bp ACAGGATCCACCCTGCTCAGTTATCAGGCTCTTGGTGGTGATATCGCAAGGGGCTCCTACCAGCTGGCATaGGTTCCAATAACAAGGCAG +
Preference number: 5 (lower is better)
Translates to: TGSTLLSYQALGGDIARGSYQLA*VPITRQ
Trigger: CTGCCTTGTTATTGGAACCAATGCCAGCTGGTAGGA...GCCCCTTGCGATATCACCACCAAGAGCCTGATAACTGAGCAGGGTGGATCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CAA 90 bp GGCGTTATTGGCTTAGGAATGAGGCTGATGCTAGGGGTTCTTGGTACACAGAGTAGGCTCATCTCACTTTaGGACAGCCGGTGTGCTGCT +
Preference number: 5 (lower is better)
Translates to: GVIGLGMRLMLGVLGTQSRLISL*DSRCAA
Trigger: AGCAGCACACCGGCTGTCCAAAAGTGAGATGAGCCT...ACTCTGTGTACCAAGAACCCCTAGCATCAGCCTCATTCCTAAGCCAATAACGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CAA 90 bp CTTAGGAATGAGGCTGATGCTAGGGGTTCTTGGTACACAGAGTTGCAACAAGGGAGGCTCATCTCACTTTaGGACAGCCGGTGTGCTGCT +
Preference number: 5 (lower is better)
Translates to: LRNEADARGSWYTELQQGRLISL*DSRCAA
Trigger: AGCAGCACACCGGCTGTCCAAAAGTGAGATGAGCCT...CCCTTGTTGCAACTCTGTGTACCAAGAACCCCTAGCATCAGCCTCATTCCTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CAA 90 bp GTGCAGCAGCTCCAGGGACAGGATCCACCCTGCTCAGTTATCAGGCTCTTGGTGGAATATTTCTGCTGCTaGAGCATTCCCTGGATTCTT +
Preference number: 5 (lower is better)
Translates to: VQQLQGQDPPCSVIRLLVEYFCC*SIPWIL
Trigger: AAGAATCCAGGGAATGCTCAAGCAGCAGAAATATTC...CACCAAGAGCCTGATAACTGAGCAGGGTGGATCCTGTCCCTGGAGCTGCTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
CDS-3UTR CAA 90 bp AGTGGGTGGGAAATACACGGTGTGAGGAGGATACGAAACAGCAGCACAAAGAGGATTTGGCTCCTGACCTaGGAGGCTGACTCTGGACAT +
Preference number: 5 (lower is better)
Translates to: SGWEIHGVRRIRNSSTKRIWLLT*EADSGH
Trigger: ATGTCCAGAGTCAGCCTCCAAGGTCAGGAGCCAAAT...CCTCTTTGTGCTGCTGTTTCGTATCCTCCTCACACCGTGTATTTCCCACCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CAA 90 bp CAAGGGGCTCAGGGATCCTACCAGCTGGCATTGGTTCCAATAACAAGGCAGACATCAGTTATCAGGCTCTaGGTGGTGATATCGCAAGGG +
Preference number: 5 (lower is better)
Translates to: QGAQGSYQLALVPITRQTSVIRL*VVISQG
Trigger: CCCTTGCGATATCACCACCAAGAGCCTGATAACTGA...TGTCTGCCTTGTTATTGGAACCAATGCCAGCTGGTAGGATCCCTGAGCCCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CAA 90 bp TGCTCAGTTATCAGGCTCTTGGTGGTGATATCGCAAGGGGCTCAGGGATCCTACCTTCTAAAATCACATTaGGCTCCTGACCTTGGAGGC +
Preference number: 5 (lower is better)
Translates to: CSVIRLLVVISQGAQGSYLLKSH*APDLGG
Trigger: GCCTCCAAGGTCAGGAGCCAAATGTGATTTTAGAAG...GTAGGATCCCTGAGCCCCTTGCGATATCACCACCAAGAGCCTGATAACTGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CAA 90 bp AAGAAGAGGGGTCAAATCAGGGTCAATGTCAGGACAGGGCTACTTGCTCCTCTCTCCTACCAGCTGGCATaGGTTCCAATAACAAGGCAG +
Preference number: 5 (lower is better)
Translates to: KKRGQIRVNVRTGLLAPLSYQLA*VPITRQ
Trigger: CTGCCTTGTTATTGGAACCAATGCCAGCTGGTAGGA...GAGAGGAGCAAGTAGCCCTGTCCTGACATTGACCCTGATTTGACCCCTCTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CAA 90 bp GCTCAGGGATCCTACCAGCTGGCATTGGTTCCAATAACAAGGCAGACACAGGAATCAGTTATCAGGCTCTaGGTGGTGATATCGCAAGGG +
Preference number: 5 (lower is better)
Translates to: AQGSYQLALVPITRQTQESVIRL*VVISQG
Trigger: CCCTTGCGATATCACCACCAAGAGCCTGATAACTGA...TTCCTGTGTCTGCCTTGTTATTGGAACCAATGCCAGCTGGTAGGATCCCTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CAA 90 bp GGCTTAGGAATGAGGCTGATGCTAGGGGTTCTTGGTACACAGAGTTGCAACAAGGTGCCCTTCATCCTTTaGGGTGTGAAACTTCACACC +
Preference number: 5 (lower is better)
Translates to: GLGMRLMLGVLGTQSCNKVPFIL*GVKLHT
Trigger: GGTGTGAAGTTTCACACCCAAAAGGATGAAGGGCAC...CTTGTTGCAACTCTGTGTACCAAGAACCCCTAGCATCAGCCTCATTCCTAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CAA 90 bp GCTAGGGGTTCTTGGTACACAGAGTTGCAACAAGGGAGAATTAATGGGTGCAGCGTGCCCTTCATCCTTTaGGGTGTGAAACTTCACACC +
Preference number: 5 (lower is better)
Translates to: ARGSWYTELQQGRINGCSVPFIL*GVKLHT
Trigger: GGTGTGAAGTTTCACACCCAAAAGGATGAAGGGCAC...GCTGCACCCATTAATTCTCCCTTGTTGCAACTCTGTGTACCAAGAACCCCTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CAA 90 bp GTTATTGGCTTAGGAATGAGGCTGATGCTAGGGGTTCTTGGTACACAGAGTTGCATTTGGCTCCTGACCTaGGAGGCTGACTCTGGACAT +
Preference number: 5 (lower is better)
Translates to: VIGLGMRLMLGVLGTQSCIWLLT*EADSGH
Trigger: ATGTCCAGAGTCAGCCTCCAAGGTCAGGAGCCAAAT...GCAACTCTGTGTACCAAGAACCCCTAGCATCAGCCTCATTCCTAAGCCAATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CAA 90 bp CTGCTCAGTTATCAGGCTCTTGGTGGTGATATCGCAAGGGGCTCAGGGATCCTATCTGACGGAGTAAAATaGGGACTGCAACTGAAAGGA +
Preference number: 5 (lower is better)
Translates to: LLSYQALGGDIARGSGILSDGVK*GLQLKG
Trigger: TCCTTTCAGTTGCAGTCCCAATTTTACTCCGTCAGA...TAGGATCCCTGAGCCCCTTGCGATATCACCACCAAGAGCCTGATAACTGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CAA 90 bp AGGGGAGGGCTGCTTTCTGACGGAGTAAAATTGGGACTGCAACTGAAAGGAAGATCCTACCAGCTGGCATaGGTTCCAATAACAAGGCAG +
Preference number: 5 (lower is better)
Translates to: RGGLLSDGVKLGLQLKGRSYQLA*VPITRQ
Trigger: CTGCCTTGTTATTGGAACCAATGCCAGCTGGTAGGA...TCTTCCTTTCAGTTGCAGTCCCAATTTTACTCCGTCAGAAAGCAGCCCTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CAA 90 bp GAATTAGTAGGCTGTGACCCTGAGTGGGTGGGAAATACACGGTGTGAGGAGGATCGCAGTTTTCCTGAGTaGACTCATAGTGGCATGGAA +
Preference number: 5 (lower is better)
Translates to: ELVGCDPEWVGNTRCEEDRSFPE*THSGME
Trigger: TTCCATGCCACTATGAGTCAACTCAGGAAAACTGCG...ATCCTCCTCACACCGTGTATTTCCCACCCACTCAGGGTCACAGCCTACTAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CAA 90 bp GGGGTCAAATCAGGGTCAATGTCAGGACAGGGCTACTTGCTCCTCTCTTCAATGCGCAGTTTTCCTGAGTaGACTCATAGTGGCATGGAA +
Preference number: 5 (lower is better)
Translates to: GVKSGSMSGQGYLLLSSMRSFPE*THSGME
Trigger: TTCCATGCCACTATGAGTCAACTCAGGAAAACTGCG...CATTGAAGAGAGGAGCAAGTAGCCCTGTCCTGACATTGACCCTGATTTGACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS GCA 90 bp GCTCAGTATGGCATGAGCTGCGTTGATCTCTTTGAATATTTCTGCTaGTTGAGCATTCCCTGGATTCTTGTCGGGATGATACCGCAAGGC +
Preference number: 5 (lower is better)
Translates to: AQYGMSCVDLFEYFC*LSIPWILVGMIPQG
Trigger: GCCTTGCGGTATCATCCCGACAAGAATCCAGGGAATGCTCAAGCAGCAGAAATATTCAAAGAGATCAACGCAGCTCATGCCATACTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
CDS-3UTR CAA 90 bp GTTATTGGCTTAGGAATGAGGCTGATGCTAGGGGTTCTTGGTACACAGAGTTGCGTGCCCTTCATCCTTTaGGGTGTGAAACTTCACACC +
Preference number: 5 (lower is better)
Translates to: VIGLGMRLMLGVLGTQSCVPFIL*GVKLHT
Trigger: GGTGTGAAGTTTCACACCCAAAAGGATGAAGGGCAC...GCAACTCTGTGTACCAAGAACCCCTAGCATCAGCCTCATTCCTAAGCCAATAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CAA 90 bp AACAAGGGAGAATTAATGGGTGCAGCAGCTCCAGGGACAGGATCCACCCTGCTCAGGATGACAAGTGTCTaGAACCAACAACTATTCAGA +
Preference number: 5 (lower is better)
Translates to: NKGELMGAAAPGTGSTLLRMTSV*NQQLFR
Trigger: TCTGAATAGTTGTTGGTTCAAGACACTTGTCATCCT...GAGCAGGGTGGATCCTGTCCCTGGAGCTGCTGCACCCATTAATTCTCCCTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
CDS-3UTR CAA 90 bp ATGAGGCTGATGCTAGGGGTTCTTGGTACACAGAGTTGCAACAAGGGAGAATTAATTTGGCTCCTGACCTaGGAGGCTGACTCTGGACAT +
Preference number: 5 (lower is better)
Translates to: MRLMLGVLGTQSCNKGELIWLLT*EADSGH
Trigger: ATGTCCAGAGTCAGCCTCCAAGGTCAGGAGCCAAAT...TAATTCTCCCTTGTTGCAACTCTGTGTACCAAGAACCCCTAGCATCAGCCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CAA 90 bp AACCAACTCCATACAGGCGTTATTGGCTTAGGAATGAGGCTGATGCTAGGGGTTTCAGGACAGGGCTACTaGCTCCTCTCTTCAATGTGT +
Preference number: 5 (lower is better)
Translates to: NQLHTGVIGLGMRLMLGVSGQGY*LLSSMC
Trigger: ACACATTGAAGAGAGGAGCAAGTAGCCCTGTCCTGA...AACCCCTAGCATCAGCCTCATTCCTAAGCCAATAACGCCTGTATGGAGTTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CAA 90 bp ATACAGAGTTGTGGTACCAAGGGTAGAGGTGATGTCCTTACTGGGATCAACGTCTCAGGACAGGGCTACTaGCTCCTCTCTTCAATGTGT +
Preference number: 5 (lower is better)
Translates to: IQSCGTKGRGDVLTGINVSGQGY*LLSSMC
Trigger: ACACATTGAAGAGAGGAGCAAGTAGCCCTGTCCTGA...GACGTTGATCCCAGTAAGGACATCACCTCTACCCTTGGTACCACAACTCTGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CAA 90 bp AGTGGGTGGGAAATACACGGTGTGAGGAGGATACGAAACAGCAGCACAAAGAGGTCTGACGGAGTAAAATaGGGACTGCAACTGAAAGGA +
Preference number: 5 (lower is better)
Translates to: SGWEIHGVRRIRNSSTKRSDGVK*GLQLKG
Trigger: TCCTTTCAGTTGCAGTCCCAATTTTACTCCGTCAGA...CCTCTTTGTGCTGCTGTTTCGTATCCTCCTCACACCGTGTATTTCCCACCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CAA 90 bp GAAAAAGACTCTTCAGGAAAAATCTGCCACCACTGCCTGAGACCTCATAAGGGGTCAGTTATCAGGCTCTaGGTGGTGATATCGCAAGGG +
Preference number: 5 (lower is better)
Translates to: EKDSSGKICHHCLRPHKGSVIRL*VVISQG
Trigger: CCCTTGCGATATCACCACCAAGAGCCTGATAACTGA...CCCCTTATGAGGTCTCAGGCAGTGGTGGCAGATTTTTCCTGAAGAGTCTTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CAA 90 bp GGAAATACACGGTGTGAGGAGGATACGAAACAGCAGCACAAAGAGGCAAGAGTGCGCAGTTTTCCTGAGTaGACTCATAGTGGCATGGAA +
Preference number: 5 (lower is better)
Translates to: GNTRCEEDTKQQHKEARVRSFPE*THSGME
Trigger: TTCCATGCCACTATGAGTCAACTCAGGAAAACTGCG...CACTCTTGCCTCTTTGTGCTGCTGTTTCGTATCCTCCTCACACCGTGTATTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CAA 90 bp ACTGAAAGGAAGAGTAGCTGGGCAACCCCATACAGAGTTGTGGTACCAAGGGTACGCAGTTTTCCTGAGTaGACTCATAGTGGCATGGAA +
Preference number: 5 (lower is better)
Translates to: TERKSSWATPYRVVVPRVRSFPE*THSGME
Trigger: TTCCATGCCACTATGAGTCAACTCAGGAAAACTGCG...TACCCTTGGTACCACAACTCTGTATGGGGTTGCCCAGCTACTCTTCCTTTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS CCA 90 bp GAGCAGAGTACACAGGATGACAAGTGTCTAAAAGGTAGGCGAGAATaGCCTCAGTCCAGCAGTTTTCTATATGACTGCTCAAGCTTCCCT +
Preference number: 5 (lower is better)
Translates to: EQSTQDDKCLKGRRE*PQSSSFLYDCSSFP
Trigger: AGGGAAGCTTGAGCAGTCATATAGAAAACTGCTGGACTGAGGCCATTCTCGCCTACCTTTTAGACACTTGTCATCCTGTGTACTCTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460358.1
CDS-3UTR CAA 90 bp AGTGGGTGGGAAATACACGGTGTGAGGAGGATACGAAACAGCAGCACAAAGAGGAGGATGACAAGTGTCTaGAACCAACAACTATTCAGA +
Preference number: 5 (lower is better)
Translates to: SGWEIHGVRRIRNSSTKRRMTSV*NQQLFR
Trigger: TCTGAATAGTTGTTGGTTCAAGACACTTGTCATCCT...CCTCTTTGTGCTGCTGTTTCGTATCCTCCTCACACCGTGTATTTCCCACCCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
CDS-3UTR CAA 90 bp GATCCTTATAAGAAGAGGGGTCAAATCAGGGTCAATGTCAGGACAGGGCTACTTCTTCTAAAATCACATTaGGCTCCTGACCTTGGAGGC +
Preference number: 5 (lower is better)
Translates to: DPYKKRGQIRVNVRTGLLLLKSH*APDLGG
Trigger: GCCTCCAAGGTCAGGAGCCAAATGTGATTTTAGAAG...AAGTAGCCCTGTCCTGACATTGACCCTGATTTGACCCCTCTTCTTATAAGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CAA 90 bp GTTATTGGCTTAGGAATGAGGCTGATGCTAGGGGTTCTTGGTACACAGAGTTGCTCTGACGGAGTAAAATaGGGACTGCAACTGAAAGGA +
Preference number: 5 (lower is better)
Translates to: VIGLGMRLMLGVLGTQSCSDGVK*GLQLKG
Trigger: TCCTTTCAGTTGCAGTCCCAATTTTACTCCGTCAGA...GCAACTCTGTGTACCAAGAACCCCTAGCATCAGCCTCATTCCTAAGCCAATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CAA 90 bp AGGGTAGAGGTGATGTCCTTACTGGGATCAACGTCATCAGTGCTTCTGAAGAGATCTGACGGAGTAAAATaGGGACTGCAACTGAAAGGA +
Preference number: 5 (lower is better)
Translates to: RVEVMSLLGSTSSVLLKRSDGVK*GLQLKG
Trigger: TCCTTTCAGTTGCAGTCCCAATTTTACTCCGTCAGA...TCTCTTCAGAAGCACTGATGACGTTGATCCCAGTAAGGACATCACCTCTACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS CCA 90 bp ACTCTGGACATTCTGCTGATATTTTCTCCCACTATCCTGCTCAGGTaGTGGTTTAAGTGCTCCACAGCAAAAACAGCAGCAACAACAGAA +
Preference number: 5 (lower is better)
Translates to: TLDILLIFSPTILLR*WFKCSTAKTAATTE
Trigger: TTCTGTTGTTGCTGCTGTTTTTGCTGTGGAGCACTTAAACCACCACCTGAGCAGGATAGTGGGAGAAAATATCAGCAGAATGTCCAGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
ENST00000460358.1
CDS TCA 90 bp TCTGACGCCTTCTTCACCAAAGTGATCATACAGATATATTCCCAATaGGCCATGCTGGTCGTAAATTTTCCGCTTCTTAGAGTCGCTCAG +
Preference number: 5 (lower is better)
Translates to: SDAFFTKVIIQIYSQ*AMLVVNFPLLRVAQ
Trigger: CTGAGCGACTCTAAGAAGCGGAAAATTTACGACCAGCATGGCTCATTGGGAATATATCTGTATGATCACTTTGGTGAAGAAGGCGTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
CDS-3UTR CAA 90 bp TTTGAACTTCAGTTAACCTACAGGACCAAGGCTAATGCATGCTGTGCTGGTAGCGAATATTTCTGCTGCTaGAGCATTCCCTGGATTCTT +
Preference number: 5 (lower is better)
Translates to: FELQLTYRTKANACCAGSEYFCC*SIPWIL
Trigger: AAGAATCCAGGGAATGCTCAAGCAGCAGAAATATTC...GCTACCAGCACAGCATGCATTAGCCTTGGTCCTGTAGGTTAACTGAAGTTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
CDS-3UTR CAA 90 bp GACACAGGAAAAAGACTCTTCAGGAAAAATCTGCCACCACTGCCTGAGACCTCAAGGATGACAAGTGTCTaGAACCAACAACTATTCAGA +
Preference number: 5 (lower is better)
Translates to: DTGKRLFRKNLPPLPETSRMTSV*NQQLFR
Trigger: TCTGAATAGTTGTTGGTTCAAGACACTTGTCATCCT...TGAGGTCTCAGGCAGTGGTGGCAGATTTTTCCTGAAGAGTCTTTTTCCTGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
CDS-3UTR CAA 90 bp ACTGGGATCAACGTCATCAGTGCTTCTGAAGAGATTCTTGAGATCCTTATAAGATCAGGACAGGGCTACTaGCTCCTCTCTTCAATGTGT +
Preference number: 5 (lower is better)
Translates to: TGINVISASEEILEILIRSGQGY*LLSSMC
Trigger: ACACATTGAAGAGAGGAGCAAGTAGCCCTGTCCTGA...TCTTATAAGGATCTCAAGAATCTCTTCAGAAGCACTGATGACGTTGATCCCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CAA 90 bp ACTGGGATCAACGTCATCAGTGCTTCTGAAGAGATTCTTGAGATCCTTATAAGATCAGTTATCAGGCTCTaGGTGGTGATATCGCAAGGG +
Preference number: 5 (lower is better)
Translates to: TGINVISASEEILEILIRSVIRL*VVISQG
Trigger: CCCTTGCGATATCACCACCAAGAGCCTGATAACTGA...TCTTATAAGGATCTCAAGAATCTCTTCAGAAGCACTGATGACGTTGATCCCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS-3UTR CAA 90 bp TGTGAAAAGGATGGAGGCAAGCTGGCACTGATGTTTGAACTTCAGTTAACCTACGAATATTTCTGCTGCTaGAGCATTCCCTGGATTCTT +
Preference number: 5 (lower is better)
Translates to: CEKDGGKLALMFELQLTYEYFCC*SIPWIL
Trigger: AAGAATCCAGGGAATGCTCAAGCAGCAGAAATATTC...GTAGGTTAACTGAAGTTCAAACATCAGTGCCAGCTTGCCTCCATCCTTTTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
CDS-3UTR CAA 90 bp ATAATATGTGAAAAGGATGGAGGCAAGCTGGCACTGATGTTTGAACTTCAGTTACTTCTAAAATCACATTaGGCTCCTGACCTTGGAGGC +
Preference number: 5 (lower is better)
Translates to: IICEKDGGKLALMFELQLLLKSH*APDLGG
Trigger: GCCTCCAAGGTCAGGAGCCAAATGTGATTTTAGAAG...TAACTGAAGTTCAAACATCAGTGCCAGCTTGCCTCCATCCTTTTCACATATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
CDS CAA 72 bp TTGGGTGTGAAACTTCACACCGGCCGGGTCCAGCAGTaGACTGCGCTTGTGCGCAGCGTCGACGCTGAGGGT +
Preference number: 6 (lower is better)
Translates to: LGVKLHTGRVQQ*TALVRSVDAEG
Trigger: ACCCTCAGCGTCGACGCTGCGCACAAGCGCAGTCAACTGCTGGACCCGGCCGGTGTGAAGTTTCACACCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296097.8
ENST00000420191.5
CDS GCA 72 bp CCCAGGCTGAAGTGTAATGGCGCGATCTCGGCTCACTaGAACCTCCACCTCCTGGGTCTGGCCCTTTACCTG +
Preference number: 6 (lower is better)
Translates to: PRLKCNGAISAH*NLHLLGLALYL
Trigger: CAGGTAAAGGGCCAGACCCAGGAGGTGGAGGTTGCAGTGAGCCGAGATCGCGCCATTACACTTCAGCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402462.5
CDS GCA 72 bp CCCAGGCTGAAGTGTAATGGCGCGATCTCGGCTCACTaGAACCTCCACCTCCTGGGTGCAAGCGATTTTCCT +
Preference number: 6 (lower is better)
Translates to: PRLKCNGAISAH*NLHLLGASDFP
Trigger: AGGAAAATCGCTTGCACCCAGGAGGTGGAGGTTGCAGTGAGCCGAGATCGCGCCATTACACTTCAGCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296097.8
ENST00000420191.5
CDS CAA 90 bp ATCTGGAGTAAACACCTCTGGGTCTGTCCAAGCTCACTGCTGGGTTaGAAAGACCAGGGCGGCCCCAGCCTGAACGGACAGGATCAGGAA +
Preference number: 6 (lower is better)
Translates to: IWSKHLWVCPSSLLG*KDQGGPSLNGQDQE
Trigger: TTCCTGATCCTGTCCGTTCAGGCTGGGGCCGCCCTGGTCTTTCAAACCCAGCAGTGAGCTTGGACAGACCCAGAGGTGTTTACTCCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000420191.5
CDS GCA 72 bp CGAGAATGGCCTCAGTCCAGCAGTTTTCTATATGACTaGTCAAGCTTCCCTCCCTCAATCCTCCTGGCACCC +
Preference number: 6 (lower is better)
Translates to: REWPQSSSFLYD*SSFPPSILLAP
Trigger: GGGTGCCAGGAGGATTGAGGGAGGGAAGCTTGAGCAGTCATATAGAAAACTGCTGGACTGAGGCCATTCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460358.1
CDS GCA 72 bp ATAGAGGCTCATCTCACTTTTGGACAGCCGGTGTGCTaGTTCCTTCACAGTAGACATGATCTGAGCCAGAGG +
Preference number: 6 (lower is better)
Translates to: IEAHLTFGQPVC*FLHSRHDLSQR
Trigger: CCTCTGGCTCAGATCATGTCTACTGTGAAGGAAGCAGCACACCGGCTGTCCAAAAGTGAGATGAGCCTCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404433.5
ENST00000406962.1
CDS CAA 90 bp CAGTATGGCATGAGCTGCGTTGATCTCTTTGAATATTTCTGCTGCTaGAGCATTCCCTGGATTCTTGTCGGGATGATACCGCAAGGCCAG +
Preference number: 6 (lower is better)
Translates to: QYGMSCVDLFEYFCC*SIPWILVGMIPQGQ
Trigger: CTGGCCTTGCGGTATCATCCCGACAAGAATCCAGGGAATGCTCAAGCAGCAGAAATATTCAAAGAGATCAACGCAGCTCATGCCATACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
CDS CCA 72 bp CTGCTGATATTTTCTCCCACTATCCTGCTCAGGTGGTaGTTTAAGTGCTCCACAGCAAAAACAGCAGCAACA +
Preference number: 6 (lower is better)
Translates to: LLIFSPTILLRW*FKCSTAKTAAT
Trigger: TGTTGCTGCTGTTTTTGCTGTGGAGCACTTAAACCACCACCTGAGCAGGATAGTGGGAGAAAATATCAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
ENST00000460358.1
CDS GCA 72 bp GGCATGAGCTGCGTTGATCTCTTTGAATATTTCTGCTaGTTGAGCATTCCCTGGATTCTTGTCGGGATGATA +
Preference number: 6 (lower is better)
Translates to: GMSCVDLFEYFC*LSIPWILVGMI
Trigger: TATCATCCCGACAAGAATCCAGGGAATGCTCAAGCAGCAGAAATATTCAAAGAGATCAACGCAGCTCATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
CDS GCA 72 bp TATGGCATGAGCTGCGTTGATCTCTTTGAATATTTCTaGTGCTTGAGCATTCCCTGGATTCTTGTCGGGATG +
Preference number: 6 (lower is better)
Translates to: YGMSCVDLFEYF*CLSIPWILVGM
Trigger: CATCCCGACAAGAATCCAGGGAATGCTCAAGCAGCAGAAATATTCAAAGAGATCAACGCAGCTCATGCCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
CDS CCA 72 bp ATTCTGCTGATATTTTCTCCCACTATCCTGCTCAGGTaGTGGTTTAAGTGCTCCACAGCAAAAACAGCAGCA +
Preference number: 6 (lower is better)
Translates to: ILLIFSPTILLR*WFKCSTAKTAA
Trigger: TGCTGCTGTTTTTGCTGTGGAGCACTTAAACCACCACCTGAGCAGGATAGTGGGAGAAAATATCAGCAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
ENST00000406962.1
ENST00000460358.1
CDS CCA 72 bp ACACAGGATGACAAGTGTCTAAAAGGTAGGCGAGAATaGCCTCAGTCCAGCAGTTTTCTATATGACTGCTCA +
Preference number: 6 (lower is better)
Translates to: TQDDKCLKGRRE*PQSSSFLYDCS
Trigger: TGAGCAGTCATATAGAAAACTGCTGGACTGAGGCCATTCTCGCCTACCTTTTAGACACTTGTCATCCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460358.1
CDS CAA 72 bp ATGAGCTGCGTTGATCTCTTTGAATATTTCTGCTGCTaGAGCATTCCCTGGATTCTTGTCGGGATGATACCG +
Preference number: 6 (lower is better)
Translates to: MSCVDLFEYFCC*SIPWILVGMIP
Trigger: CGGTATCATCCCGACAAGAATCCAGGGAATGCTCAAGCAGCAGAAATATTCAAAGAGATCAACGCAGCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5
CDS TCA 72 bp TTCTTCACCAAAGTGATCATACAGATATATTCCCAATaGGCCATGCTGGTCGTAAATTTTCCGCTTCTTAGA +
Preference number: 6 (lower is better)
Translates to: FFTKVIIQIYSQ*AMLVVNFPLLR
Trigger: TCTAAGAAGCGGAAAATTTACGACCAGCATGGCTCATTGGGAATATATCTGTATGATCACTTTGGTGAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296097.8
ENST00000402462.5
ENST00000404433.5