RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DNAJC5 (Homo sapiens)

Ensembl gene IDs: ENSG00000101152

Ensembl transcript IDs: ENST00000360864.9, ENST00000470551.1

Found 253 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCTCGCCCACCTGACCGGCTGCAGTCACCCCTCACTGGACCAACCTaGCCGACAGCCCTGAGGCAGCTCCACCGTGCAGTTCACGCGGTC +
Preference number: 1 (lower is better)
Translates to: PRPPDRLQSPLTGPT*PTALRQLHRAVHAV
Trigger: GACCGCGTGAACTGCACGGTGGAGCTGCCTCAGGGCTGTCGGTCAGGTTGGTCCAGTGAGGGGTGACTGCAGCCGGTCAGGTGGGCGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR TCA 90 bp ACCGGCTGCAGTCACCCCTCACTGGACCAACCTGACCGACAGCCCTaGGGCAGCTCCACCGTGCAGTTCACGCGGTCATGCCGCGGAATG +
Preference number: 1 (lower is better)
Translates to: TGCSHPSLDQPDRQP*GSSTVQFTRSCRGM
Trigger: CATTCCGCGGCATGACCGCGTGAACTGCACGGTGGAGCTGCCTCAGGGCTGTCGGTCAGGTTGGTCCAGTGAGGGGTGACTGCAGCCGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR TCA 90 bp GCCGGTGACGCCAGGAGGACGCGGCCCCGCCTCTCTTCTGGCAGGTaGGATCAGAGTCCTACTGCAGCCTCAAGGCTGGGAGCACAGAGT +
Preference number: 1 (lower is better)
Translates to: AGDARRTRPRLSSGR*DQSPTAASRLGAQS
Trigger: ACTCTGTGCTCCCAGCCTTGAGGCTGCAGTAGGACTCTGATCTCACCTGCCAGAAGAGAGGCGGGGCCGCGTCCTCCTGGCGTCACCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR GCA 90 bp GACGCGGCCCCGCCTCTCTTCTGGCAGGTGAGATCAGAGTCCTACTaGAGCCTCAAGGCTGGGAGCACAGAGTGTGGACCAGACCCCGAG +
Preference number: 1 (lower is better)
Translates to: DAAPPLFWQVRSESY*SLKAGSTECGPDPE
Trigger: CTCGGGGTCTGGTCCACACTCTGTGCTCCCAGCCTTGAGGCTGCAGTAGGACTCTGATCTCACCTGCCAGAAGAGAGGCGGGGCCGCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR GCA 90 bp ACAGAGTGTGGACCAGACCCCGAGGCCAAGACGGTAACACAGCTCTaGCAGGCAGCACCTGCCTCCGGCCCCTCAAGCACAGGTAGGAAA +
Preference number: 1 (lower is better)
Translates to: TECGPDPEAKTVTQL*QAAPASGPSSTGRK
Trigger: TTTCCTACCTGTGCTTGAGGGGCCGGAGGCAGGTGCTGCCTGGCAGAGCTGTGTTACCGTCTTGGCCTCGGGGTCTGGTCCACACTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR GCA 90 bp CCTCACTGGACCAACCTGACCGACAGCCCTGAGGCAGCTCCACCGTaGAGTTCACGCGGTCATGCCGCGGAATGTCCACAACACAGACAT +
Preference number: 1 (lower is better)
Translates to: PHWTNLTDSPEAAPP*SSRGHAAECPQHRH
Trigger: ATGTCTGTGTTGTGGACATTCCGCGGCATGACCGCGTGAACTGCACGGTGGAGCTGCCTCAGGGCTGTCGGTCAGGTTGGTCCAGTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR CCA 90 bp GAGATCAGAGTCCTACTGCAGCCTCAAGGCTGGGAGCACAGAGTGTaGACCAGACCCCGAGGCCAAGACGGTAACACAGCTCTGCCAGGC +
Preference number: 1 (lower is better)
Translates to: EIRVLLQPQGWEHRV*TRPRGQDGNTALPG
Trigger: GCCTGGCAGAGCTGTGTTACCGTCTTGGCCTCGGGGTCTGGTCCACACTCTGTGCTCCCAGCCTTGAGGCTGCAGTAGGACTCTGATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR TCA 90 bp GTTCATGATTCTAAGGTTGGCGTGGCCAGGCGCCGGCTCCTCCTCTaGCCACAGCTCCTCCTGGATTTAGTTGAACCCGTCAGTGTGGTA +
Preference number: 1 (lower is better)
Translates to: VHDSKVGVARRRLLL*PQLLLDLVEPVSVV
Trigger: TACCACACTGACGGGTTCAACTAAATCCAGGAGGAGCTGTGGTCAGAGGAGGAGCCGGCGCCTGGCCACGCCAACCTTAGAATCATGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470551.1
3UTR TCA 90 bp GTCACTTCACCAGGGGACAGCAGCATGAATGACACTCCTGCTGCGTaGTATATACATATACACATATGTACACACACGGACACACCACAG +
Preference number: 1 (lower is better)
Translates to: VTSPGDSSMNDTPAA*YIHIHICTHTDTPQ
Trigger: CTGTGGTGTGTCCGTGTGTGTACATATGTGTATATGTATATATCACGCAGCAGGAGTGTCATTCATGCTGCTGTCCCCTGGTGAAGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR CCA 90 bp GTGCTGCCCGGACCCCCTCGTGAACCGGACGGGCCTCAAAGCACGACCCCAGAGAGGGTCGACGCTGGGTaGGCGTGGAGGCAGGAGGGG +
Preference number: 2 (lower is better)
Translates to: VLPGPPREPDGPQSTTPERVDAG*AWRQEG
Trigger: CCCCTCCTGCCTCCACGCCCACCCAGCGTCGACCCT...CTCTGGGGTCGTGCTTTGAGGCCCGTCCGGTTCACGAGGGGGTCCGGGCAGCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR CCA 90 bp GTGCTGCCCGGACCCCCTCGTGAACCGGACGGGCCTCAAAGCACGACCCCAGAGGAGTCGGCTGTGAGCTaGGTGGTCTCGGTGGCGGAT +
Preference number: 2 (lower is better)
Translates to: VLPGPPREPDGPQSTTPEESAVS*VVSVAD
Trigger: ATCCGCCACCGAGACCACCCAGCTCACAGCCGACTC...CTCTGGGGTCGTGCTTTGAGGCCCGTCCGGTTCACGAGGGGGTCCGGGCAGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470551.1
3UTR-3UTR TCA 90 bp CCCCTTCTCCTCGCCCACCTGACCGGCTGCAGTCACCCCTCACTGGACCAACCTTTCTCCTCGCCCACCTaGCCGGCTGCAGTCACCCCT +
Preference number: 2 (lower is better)
Translates to: PLLLAHLTGCSHPSLDQPFSSPT*PAAVTP
Trigger: AGGGGTGACTGCAGCCGGTCAGGTGGGCGAGGAGAA...AGGTTGGTCCAGTGAGGGGTGACTGCAGCCGGTCAGGTGGGCGAGGAGAAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR GCA 90 bp GTGCTGCCCGGACCCCCTCGTGAACCGGACGGGCCTCAAAGCACGACCCCAGAGAGGCCCACTGGAGTCTaGAGCATGGCGCCAAAGGCA +
Preference number: 2 (lower is better)
Translates to: VLPGPPREPDGPQSTTPERPTGV*SMAPKA
Trigger: TGCCTTTGGCGCCATGCTGCAGACTCCAGTGGGCCT...CTCTGGGGTCGTGCTTTGAGGCCCGTCCGGTTCACGAGGGGGTCCGGGCAGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR GCA 90 bp CCCCTTCTCCTCGCCCACCTGACCGGCTGCAGTCACCCCTCACTGGACCAACCTGAGGCAGCTCCACCGTaGAGTTCACGCGGTCATGCC +
Preference number: 2 (lower is better)
Translates to: PLLLAHLTGCSHPSLDQPEAAPP*SSRGHA
Trigger: GGCATGACCGCGTGAACTGCACGGTGGAGCTGCCTC...AGGTTGGTCCAGTGAGGGGTGACTGCAGCCGGTCAGGTGGGCGAGGAGAAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR CCA 90 bp CCCCTTCTCCTCGCCCACCTGACCGGCTGCAGTCACCCCTCACTGGACCAACCTATTCTAAGGTTGGCGTaGCCAGGCGCCGGCTCCTCC +
Preference number: 2 (lower is better)
Translates to: PLLLAHLTGCSHPSLDQPILRLA*PGAGSS
Trigger: GGAGGAGCCGGCGCCTGGCCACGCCAACCTTAGAAT...AGGTTGGTCCAGTGAGGGGTGACTGCAGCCGGTCAGGTGGGCGAGGAGAAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR TCA 90 bp GGGAAAGCCTCCTGCAGGTCCCTGCCCGACTCCCAAGAAACCAGAGGCCATTTCTCTGCGGCCCGAGAGTaGGGAGTCGGGGTCCCGTCA +
Preference number: 2 (lower is better)
Translates to: GKASCRSLPDSQETRGHFSAARE*GVGVPS
Trigger: TGACGGGACCCCGACTCCTCACTCTCGGGCCGCAGA...GAAATGGCCTCTGGTTTCTTGGGAGTCGGGCAGGGACCTGCAGGAGGCTTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR GCA 90 bp GGGAAAGCCTCCTGCAGGTCCCTGCCCGACTCCCAAGAAACCAGAGGCCATTTCCTGCCAGGCAGCACCTaGCTCCGGCCCCTCAAGCAC +
Preference number: 2 (lower is better)
Translates to: GKASCRSLPDSQETRGHFLPGST*LRPLKH
Trigger: GTGCTTGAGGGGCCGGAGGCAGGTGCTGCCTGGCAG...GAAATGGCCTCTGGTTTCTTGGGAGTCGGGCAGGGACCTGCAGGAGGCTTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR GCA 90 bp CCCCTTCTCCTCGCCCACCTGACCGGCTGCAGTCACCCCTCACTGGACCAACCTACGGTAACACAGCTCTaGCAGGCAGCACCTGCCTCC +
Preference number: 2 (lower is better)
Translates to: PLLLAHLTGCSHPSLDQPTVTQL*QAAPAS
Trigger: GGAGGCAGGTGCTGCCTGGCAGAGCTGTGTTACCGT...AGGTTGGTCCAGTGAGGGGTGACTGCAGCCGGTCAGGTGGGCGAGGAGAAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR CCA 90 bp CCCCTTCTCCTCGCCCACCTGACCGGCTGCAGTCACCCCTCACTGGACCAACCTGCAGTCACCCCTCACTaGACCAACCTGACCGACAGC +
Preference number: 2 (lower is better)
Translates to: PLLLAHLTGCSHPSLDQPAVTPH*TNLTDS
Trigger: GCTGTCGGTCAGGTTGGTCCAGTGAGGGGTGACTGC...AGGTTGGTCCAGTGAGGGGTGACTGCAGCCGGTCAGGTGGGCGAGGAGAAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR TCA 90 bp GTGCTGCCCGGACCCCCTCGTGAACCGGACGGGCCTCAAAGCACGACCCCAGAGCTCTCTTCTGGCAGGTaGGATCAGAGTCCTACTGCA +
Preference number: 2 (lower is better)
Translates to: VLPGPPREPDGPQSTTPELSSGR*DQSPTA
Trigger: TGCAGTAGGACTCTGATCTCACCTGCCAGAAGAGAG...CTCTGGGGTCGTGCTTTGAGGCCCGTCCGGTTCACGAGGGGGTCCGGGCAGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR GCA 90 bp GGGAAAGCCTCCTGCAGGTCCCTGCCCGACTCCCAAGAAACCAGAGGCCATTTCGCCCACCTGACCGGCTaGAGTCACCCCTCACTGGAC +
Preference number: 2 (lower is better)
Translates to: GKASCRSLPDSQETRGHFAHLTG*SHPSLD
Trigger: GTCCAGTGAGGGGTGACTGCAGCCGGTCAGGTGGGC...GAAATGGCCTCTGGTTTCTTGGGAGTCGGGCAGGGACCTGCAGGAGGCTTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR GCA 90 bp GGGAAAGCCTCCTGCAGGTCCCTGCCCGACTCCCAAGAAACCAGAGGCCATTTCGCTGGTGCCCTTCCTTaGAGCACAAGCCTCGCCCGG +
Preference number: 2 (lower is better)
Translates to: GKASCRSLPDSQETRGHFAGALP*STSLAR
Trigger: CCGGGCGAGGCTTGTGCTGCAAGGAAGGGCACCAGC...GAAATGGCCTCTGGTTTCTTGGGAGTCGGGCAGGGACCTGCAGGAGGCTTTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR TCA 90 bp CTCCGAGAACCAGAACGGCAGCGTCCACACGACGAGACGACCAGGCGAGAAACACTCACTGGACCAACCTaGCCGACAGCCCTGAGGCAG +
Preference number: 2 (lower is better)
Translates to: LREPERQRPHDETTRRETLTGPT*PTALRQ
Trigger: CTGCCTCAGGGCTGTCGGTCAGGTTGGTCCAGTGAG...TGTTTCTCGCCTGGTCGTCTCGTCGTGTGGACGCTGCCGTTCTGGTTCTCGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR TCA 90 bp GGGAAAGCCTCCTGCAGGTCCCTGCCCGACTCCCAAGAAACCAGAGGCCATTTCCGGATGCCGGCTGTATaGCGATCGGCGTGTCTGTGG +
Preference number: 2 (lower is better)
Translates to: GKASCRSLPDSQETRGHFRMPAV*RSACLW
Trigger: CCACAGACACGCCGATCGTCATACAGCCGGCATCCG...GAAATGGCCTCTGGTTTCTTGGGAGTCGGGCAGGGACCTGCAGGAGGCTTTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470551.1
3UTR-3UTR CCA 90 bp CAGTTCACGCGGTCATGCCGCGGAATGTCCACAACACAGACATGGAACAGAACCAGGGTCGACGCTGGGTaGGCGTGGAGGCAGGAGGGG +
Preference number: 2 (lower is better)
Translates to: QFTRSCRGMSTTQTWNRTRVDAG*AWRQEG
Trigger: CCCCTCCTGCCTCCACGCCCACCCAGCGTCGACCCT...GGTTCTGTTCCATGTCTGTGTTGTGGACATTCCGCGGCATGACCGCGTGAACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR GCA 90 bp GGGAAAGCCTCCTGCAGGTCCCTGCCCGACTCCCAAGAAACCAGAGGCCATTTCCTGAACCTACCCTTCTaGACAGCCTCGGGTGGCTGC +
Preference number: 2 (lower is better)
Translates to: GKASCRSLPDSQETRGHFLNLPF*TASGGC
Trigger: GCAGCCACCCGAGGCTGTGCAGAAGGGTAGGTTCAG...GAAATGGCCTCTGGTTTCTTGGGAGTCGGGCAGGGACCTGCAGGAGGCTTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR GCA 90 bp GCCTCTCTTCTGGCAGGTGAGATCAGAGTCCTACTGCAGCCTCAAGGCTGGGAGGGTCTCGGTGGCGGATaGCGGCTGTATGACGATCGG +
Preference number: 2 (lower is better)
Translates to: ASLLAGEIRVLLQPQGWEGLGGG*RLYDDR
Trigger: CCGATCGTCATACAGCCGGCATCCGCCACCGAGACC...CTCCCAGCCTTGAGGCTGCAGTAGGACTCTGATCTCACCTGCCAGAAGAGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470551.1
3UTR-3UTR CCA 90 bp GCCTCTCTTCTGGCAGGTGAGATCAGAGTCCTACTGCAGCCTCAAGGCTGGGAGATTCTAAGGTTGGCGTaGCCAGGCGCCGGCTCCTCC +
Preference number: 2 (lower is better)
Translates to: ASLLAGEIRVLLQPQGWEILRLA*PGAGSS
Trigger: GGAGGAGCCGGCGCCTGGCCACGCCAACCTTAGAAT...CTCCCAGCCTTGAGGCTGCAGTAGGACTCTGATCTCACCTGCCAGAAGAGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR CCA 90 bp CTCCGAGAACCAGAACGGCAGCGTCCACACGACGAGACGACCAGGCGAGAAACAGCAGTCACCCCTCACTaGACCAACCTGACCGACAGC +
Preference number: 2 (lower is better)
Translates to: LREPERQRPHDETTRRETAVTPH*TNLTDS
Trigger: GCTGTCGGTCAGGTTGGTCCAGTGAGGGGTGACTGC...TGTTTCTCGCCTGGTCGTCTCGTCGTGTGGACGCTGCCGTTCTGGTTCTCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR CCA 90 bp CTCCGAGAACCAGAACGGCAGCGTCCACACGACGAGACGACCAGGCGAGAAACATGGGAGCACAGAGTGTaGACCAGACCCCGAGGCCAA +
Preference number: 2 (lower is better)
Translates to: LREPERQRPHDETTRRETWEHRV*TRPRGQ
Trigger: TTGGCCTCGGGGTCTGGTCCACACTCTGTGCTCCCA...TGTTTCTCGCCTGGTCGTCTCGTCGTGTGGACGCTGCCGTTCTGGTTCTCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR CCA 90 bp GGGAAAGCCTCCTGCAGGTCCCTGCCCGACTCCCAAGAAACCAGAGGCCATTTCCTGCACAGCCTCGGGTaGCTGCTGAGGGCAATGAGT +
Preference number: 2 (lower is better)
Translates to: GKASCRSLPDSQETRGHFLHSLG*LLRAMS
Trigger: ACTCATTGCCCTCAGCAGCCACCCGAGGCTGTGCAG...GAAATGGCCTCTGGTTTCTTGGGAGTCGGGCAGGGACCTGCAGGAGGCTTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR GCA 90 bp GTGCTGCCCGGACCCCCTCGTGAACCGGACGGGCCTCAAAGCACGACCCCAGAGGCTTTAAATACTGCATaGTACGCACTTCGTGGGTCA +
Preference number: 2 (lower is better)
Translates to: VLPGPPREPDGPQSTTPEALNTA*YALRGS
Trigger: TGACCCACGAAGTGCGTAGCATGCAGTATTTAAAGC...CTCTGGGGTCGTGCTTTGAGGCCCGTCCGGTTCACGAGGGGGTCCGGGCAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR GCA 90 bp GGGAAAGCCTCCTGCAGGTCCCTGCCCGACTCCCAAGAAACCAGAGGCCATTTCGGACCTCTGCAACTCTaGAGCGGCCACCATGGACAT +
Preference number: 2 (lower is better)
Translates to: GKASCRSLPDSQETRGHFGPLQL*SGHHGH
Trigger: ATGTCCATGGTGGCCGCTGCAGAGTTGCAGAGGTCC...GAAATGGCCTCTGGTTTCTTGGGAGTCGGGCAGGGACCTGCAGGAGGCTTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR CCA 90 bp CAGTTCACGCGGTCATGCCGCGGAATGTCCACAACACAGACATGGAACAGAACCGTCAAGGGTCGACGCTaGGTGGGCGTGGAGGCAGGA +
Preference number: 2 (lower is better)
Translates to: QFTRSCRGMSTTQTWNRTVKGRR*VGVEAG
Trigger: TCCTGCCTCCACGCCCACCCAGCGTCGACCCTTGAC...GGTTCTGTTCCATGTCTGTGTTGTGGACATTCCGCGGCATGACCGCGTGAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR TCA 90 bp GCTCAGAAAATCAGCTTTCATGTTTCAAGGCAGGGAAGGGCTTCCAGTCCCCTCCCTGACCGACAGCCCTaGGGCAGCTCCACCGTGCAG +
Preference number: 2 (lower is better)
Translates to: AQKISFHVSRQGRASSPLPDRQP*GSSTVQ
Trigger: CTGCACGGTGGAGCTGCCTCAGGGCTGTCGGTCAGG...GAGGGGACTGGAAGCCCTTCCCTGCCTTGAAACATGAAAGCTGATTTTCTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR TCA 90 bp GGGAAAGCCTCCTGCAGGTCCCTGCCCGACTCCCAAGAAACCAGAGGCCATTTCGGACACGCAAGAGACTaGCTTCCCATGGTCCACATG +
Preference number: 2 (lower is better)
Translates to: GKASCRSLPDSQETRGHFGHARD*LPMVHM
Trigger: CATGTGGACCATGGGAAGTCAGTCTCTTGCGTGTCC...GAAATGGCCTCTGGTTTCTTGGGAGTCGGGCAGGGACCTGCAGGAGGCTTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR GCA 90 bp CTCCGAGAACCAGAACGGCAGCGTCCACACGACGAGACGACCAGGCGAGAAACACAGTTCACGCGGTCATaGCGCGGAATGTCCACAACA +
Preference number: 2 (lower is better)
Translates to: LREPERQRPHDETTRRETQFTRS*RGMSTT
Trigger: TGTTGTGGACATTCCGCGGCATGACCGCGTGAACTG...TGTTTCTCGCCTGGTCGTCTCGTCGTGTGGACGCTGCCGTTCTGGTTCTCGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR GCA 90 bp GGGAAAGCCTCCTGCAGGTCCCTGCCCGACTCCCAAGAAACCAGAGGCCATTTCAGACGAAGCTTTTCCTaGTGGGCACGTGTGCATGCC +
Preference number: 2 (lower is better)
Translates to: GKASCRSLPDSQETRGHFRRSFS*WARVHA
Trigger: GGCATGCACACGTGCCCAGCAGGAAAAGCTTCGTCT...GAAATGGCCTCTGGTTTCTTGGGAGTCGGGCAGGGACCTGCAGGAGGCTTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR GCA 90 bp GCCTCTCTTCTGGCAGGTGAGATCAGAGTCCTACTGCAGCCTCAAGGCTGGGAGCTCAACAGTCCCAGCTaGCACCACAAACACTCGCGG +
Preference number: 2 (lower is better)
Translates to: ASLLAGEIRVLLQPQGWELNSPS*HHKHSR
Trigger: CCGCGAGTGTTTGTGGTGGCAGCTGGGACTGTTGAG...CTCCCAGCCTTGAGGCTGCAGTAGGACTCTGATCTCACCTGCCAGAAGAGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470551.1
3UTR-3UTR CCA 90 bp GCCTCTCTTCTGGCAGGTGAGATCAGAGTCCTACTGCAGCCTCAAGGCTGGGAGATGCTACGCACTTCGTaGGTCAAGGGTCGACGCTGG +
Preference number: 2 (lower is better)
Translates to: ASLLAGEIRVLLQPQGWEMLRTS*VKGRRW
Trigger: CCAGCGTCGACCCTTGACCCACGAAGTGCGTAGCAT...CTCCCAGCCTTGAGGCTGCAGTAGGACTCTGATCTCACCTGCCAGAAGAGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR CCA 90 bp CAGGTGAGATCAGAGTCCTACTGCAGCCTCAAGGCTGGGAGCACAGAGTGTGGACGATCGGCGTGTCTGTaGCCTCTCAGGGTCCACGTT +
Preference number: 2 (lower is better)
Translates to: QVRSESYCSLKAGSTECGRSACL*PLRVHV
Trigger: AACGTGGACCCTGAGAGGCCACAGACACGCCGATCG...TCCACACTCTGTGCTCCCAGCCTTGAGGCTGCAGTAGGACTCTGATCTCACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470551.1
3UTR-3UTR TCA 90 bp GGGAAAGCCTCCTGCAGGTCCCTGCCCGACTCCCAAGAAACCAGAGGCCATTTCCACACTCACAGCATGTaGCGACGCAAACTGTTGCTG +
Preference number: 2 (lower is better)
Translates to: GKASCRSLPDSQETRGHFHTHSM*RRKLLL
Trigger: CAGCAACAGTTTGCGTCGTCACATGCTGTGAGTGTG...GAAATGGCCTCTGGTTTCTTGGGAGTCGGGCAGGGACCTGCAGGAGGCTTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR CCA 90 bp GCTCAGAAAATCAGCTTTCATGTTTCAAGGCAGGGAAGGGCTTCCAGTCCCCTCAGCAGAGGCCAATGCTaGTGGGGGCCGTGGCAGTGC +
Preference number: 2 (lower is better)
Translates to: AQKISFHVSRQGRASSPLSRGQC*WGPWQC
Trigger: GCACTGCCACGGCCCCCACCAGCATTGGCCTCTGCT...GAGGGGACTGGAAGCCCTTCCCTGCCTTGAAACATGAAAGCTGATTTTCTGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR GCA 90 bp CAGGTGAGATCAGAGTCCTACTGCAGCCTCAAGGCTGGGAGCACAGAGTGTGGACAGTTCACGCGGTCATaGCGCGGAATGTCCACAACA +
Preference number: 2 (lower is better)
Translates to: QVRSESYCSLKAGSTECGQFTRS*RGMSTT
Trigger: TGTTGTGGACATTCCGCGGCATGACCGCGTGAACTG...TCCACACTCTGTGCTCCCAGCCTTGAGGCTGCAGTAGGACTCTGATCTCACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR TCA 90 bp ATCTGCTGCTCAGAAAATCAGCTTTCATGTTTCAAGGCAGGGAAGGGCTTCCAGAGGGTGGACAAGCGCTaGACTCTGCCCGCAGCACCC +
Preference number: 2 (lower is better)
Translates to: ICCSENQLSCFKAGKGFQRVDKR*TLPAAP
Trigger: GGGTGCTGCGGGCAGAGTTCAGCGCTTGTCCACCCT...CTGGAAGCCCTTCCCTGCCTTGAAACATGAAAGCTGATTTTCTGAGCAGCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR GCA 90 bp GGGAAAGCCTCCTGCAGGTCCCTGCCCGACTCCCAAGAAACCAGAGGCCATTTCCTGGGTGCTCACACATaGACAATCTACTCTCTGACT +
Preference number: 2 (lower is better)
Translates to: GKASCRSLPDSQETRGHFLGAHT*TIYSLT
Trigger: AGTCAGAGAGTAGATTGTGCATGTGTGAGCACCCAG...GAAATGGCCTCTGGTTTCTTGGGAGTCGGGCAGGGACCTGCAGGAGGCTTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR GCA 90 bp GCTCAGAAAATCAGCTTTCATGTTTCAAGGCAGGGAAGGGCTTCCAGTCCCCTCAGGCCCACTGGAGTCTaGAGCATGGCGCCAAAGGCA +
Preference number: 2 (lower is better)
Translates to: AQKISFHVSRQGRASSPLRPTGV*SMAPKA
Trigger: TGCCTTTGGCGCCATGCTGCAGACTCCAGTGGGCCT...GAGGGGACTGGAAGCCCTTCCCTGCCTTGAAACATGAAAGCTGATTTTCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR GCA 90 bp GCTCAGAAAATCAGCTTTCATGTTTCAAGGCAGGGAAGGGCTTCCAGTCCCCTCCTCTACAGGGACCTCTaGAACTCTGCAGCGGCCACC +
Preference number: 2 (lower is better)
Translates to: AQKISFHVSRQGRASSPLLYRDL*NSAAAT
Trigger: GGTGGCCGCTGCAGAGTTGCAGAGGTCCCTGTAGAG...GAGGGGACTGGAAGCCCTTCCCTGCCTTGAAACATGAAAGCTGATTTTCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR GCA 90 bp ATCTGCTGCTCAGAAAATCAGCTTTCATGTTTCAAGGCAGGGAAGGGCTTCCAGGTCGGAAGCAGTCAGTaGTGCCCGGACCCCCTCGTG +
Preference number: 2 (lower is better)
Translates to: ICCSENQLSCFKAGKGFQVGSSQ*CPDPLV
Trigger: CACGAGGGGGTCCGGGCAGCACTGACTGCTTCCGAC...CTGGAAGCCCTTCCCTGCCTTGAAACATGAAAGCTGATTTTCTGAGCAGCAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR GCA 90 bp GGGAAAGCCTCCTGCAGGTCCCTGCCCGACTCCCAAGAAACCAGAGGCCATTTCCTGGGCACGTGTGCATaGCAGTTCCTTTTTCTAGTA +
Preference number: 2 (lower is better)
Translates to: GKASCRSLPDSQETRGHFLGTCA*QFLFLV
Trigger: TACTAGAAAAAGGAACTGGCATGCACACGTGCCCAG...GAAATGGCCTCTGGTTTCTTGGGAGTCGGGCAGGGACCTGCAGGAGGCTTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR GCA 90 bp GCTCAGAAAATCAGCTTTCATGTTTCAAGGCAGGGAAGGGCTTCCAGTCCCCTCATGGGCACCCCACCCTaGAGAGCAGAGGCCAATGCT +
Preference number: 2 (lower is better)
Translates to: AQKISFHVSRQGRASSPLMGTPP*RAEANA
Trigger: AGCATTGGCCTCTGCTCTGCAGGGTGGGGTGCCCAT...GAGGGGACTGGAAGCCCTTCCCTGCCTTGAAACATGAAAGCTGATTTTCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR CCA 90 bp GGGAAAGCCTCCTGCAGGTCCCTGCCCGACTCCCAAGAAACCAGAGGCCATTTCCACAGCTCTGAATACTaGGAAAGGGTGAGATCAGTC +
Preference number: 2 (lower is better)
Translates to: GKASCRSLPDSQETRGHFHSSEY*ERVRSV
Trigger: GACTGATCTCACCCTTTCCCAGTATTCAGAGCTGTG...GAAATGGCCTCTGGTTTCTTGGGAGTCGGGCAGGGACCTGCAGGAGGCTTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR TCA 90 bp GCTCAGAAAATCAGCTTTCATGTTTCAAGGCAGGGAAGGGCTTCCAGTCCCCTCCAGGGGACAGCAGCATaGATGACACTCCTGCTGCGT +
Preference number: 2 (lower is better)
Translates to: AQKISFHVSRQGRASSPLQGTAA*MTLLLR
Trigger: ACGCAGCAGGAGTGTCATTCATGCTGCTGTCCCCTG...GAGGGGACTGGAAGCCCTTCCCTGCCTTGAAACATGAAAGCTGATTTTCTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR GCA 90 bp ATCTGCTGCTCAGAAAATCAGCTTTCATGTTTCAAGGCAGGGAAGGGCTTCCAGGGAAGCAGTCAGTGCTaGCCGGACCCCCTCGTGAAC +
Preference number: 2 (lower is better)
Translates to: ICCSENQLSCFKAGKGFQGSSQC*PDPLVN
Trigger: GTTCACGAGGGGGTCCGGGCAGCACTGACTGCTTCC...CTGGAAGCCCTTCCCTGCCTTGAAACATGAAAGCTGATTTTCTGAGCAGCAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR TCA 90 bp GCCTCTCTTCTGGCAGGTGAGATCAGAGTCCTACTGCAGCCTCAAGGCTGGGAGGCCTTCCCATCTCTGTaGCTACAGTTCATGATTCTA +
Preference number: 2 (lower is better)
Translates to: ASLLAGEIRVLLQPQGWEAFPSL*LQFMIL
Trigger: TAGAATCATGAACTGTAGTCACAGAGATGGGAAGGC...CTCCCAGCCTTGAGGCTGCAGTAGGACTCTGATCTCACCTGCCAGAAGAGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR GCA 90 bp CCGCGGAATGTCCACAACACAGACATGGAACAGAACCCCATACATGCTATTAAAGAGGCAGCTCCACCGTaGAGTTCACGCGGTCATGCC +
Preference number: 2 (lower is better)
Translates to: PRNVHNTDMEQNPIHAIKEAAPP*SSRGHA
Trigger: GGCATGACCGCGTGAACTGCACGGTGGAGCTGCCTC...TTTAATAGCATGTATGGGGTTCTGTTCCATGTCTGTGTTGTGGACATTCCGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR GCA 90 bp ATCTGCTGCTCAGAAAATCAGCTTTCATGTTTCAAGGCAGGGAAGGGCTTCCAGCGCTCCTACGCCTCCTaGAGGTCGGAAGCAGTCAGT +
Preference number: 2 (lower is better)
Translates to: ICCSENQLSCFKAGKGFQRSYAS*RSEAVS
Trigger: ACTGACTGCTTCCGACCTGCAGGAGGCGTAGGAGCG...CTGGAAGCCCTTCCCTGCCTTGAAACATGAAAGCTGATTTTCTGAGCAGCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR GCA 90 bp ATCTGCTGCTCAGAAAATCAGCTTTCATGTTTCAAGGCAGGGAAGGGCTTCCAGCAGTGGCAGCCTGCATaGTGGTGCCCTTCCTTGCAG +
Preference number: 2 (lower is better)
Translates to: ICCSENQLSCFKAGKGFQQWQPA*WCPSLQ
Trigger: CTGCAAGGAAGGGCACCAGCATGCAGGCTGCCACTG...CTGGAAGCCCTTCCCTGCCTTGAAACATGAAAGCTGATTTTCTGAGCAGCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR CCA 90 bp GCCTCTCTTCTGGCAGGTGAGATCAGAGTCCTACTGCAGCCTCAAGGCTGGGAGTCCACAACACAGACATaGAACAGAACCCCATACATG +
Preference number: 2 (lower is better)
Translates to: ASLLAGEIRVLLQPQGWESTTQT*NRTPYM
Trigger: CATGTATGGGGTTCTGTTCCATGTCTGTGTTGTGGA...CTCCCAGCCTTGAGGCTGCAGTAGGACTCTGATCTCACCTGCCAGAAGAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR CCA 90 bp ATCTGCTGCTCAGAAAATCAGCTTTCATGTTTCAAGGCAGGGAAGGGCTTCCAGCTGGCAGCCGGCTCATaGTCCACATGCGGATCTGCA +
Preference number: 2 (lower is better)
Translates to: ICCSENQLSCFKAGKGFQLAAGS*STCGSA
Trigger: TGCAGATCCGCATGTGGACCATGAGCCGGCTGCCAG...CTGGAAGCCCTTCCCTGCCTTGAAACATGAAAGCTGATTTTCTGAGCAGCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR GCA 90 bp ATCTGCTGCTCAGAAAATCAGCTTTCATGTTTCAAGGCAGGGAAGGGCTTCCAGCAGCGCTTCCTTCTGTaGACCTGCTGGGAAAGCCTC +
Preference number: 2 (lower is better)
Translates to: ICCSENQLSCFKAGKGFQQRFLL*TCWESL
Trigger: GAGGCTTTCCCAGCAGGTGCACAGAAGGAAGCGCTG...CTGGAAGCCCTTCCCTGCCTTGAAACATGAAAGCTGATTTTCTGAGCAGCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR CCA 90 bp CAGGTGAGATCAGAGTCCTACTGCAGCCTCAAGGCTGGGAGCACAGAGTGTGGATCCACAACACAGACATaGAACAGAACCCCATACATG +
Preference number: 2 (lower is better)
Translates to: QVRSESYCSLKAGSTECGSTTQT*NRTPYM
Trigger: CATGTATGGGGTTCTGTTCCATGTCTGTGTTGTGGA...TCCACACTCTGTGCTCCCAGCCTTGAGGCTGCAGTAGGACTCTGATCTCACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR GCA 90 bp ATCTGCTGCTCAGAAAATCAGCTTTCATGTTTCAAGGCAGGGAAGGGCTTCCAGTGGGACAAACAAAGCTaGCCAGGACCTAGTGCTGGC +
Preference number: 2 (lower is better)
Translates to: ICCSENQLSCFKAGKGFQWDKQS*PGPSAG
Trigger: GCCAGCACTAGGTCCTGGGCAGCTTTGTTTGTCCCA...CTGGAAGCCCTTCCCTGCCTTGAAACATGAAAGCTGATTTTCTGAGCAGCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR GCA 90 bp ATCTGCTGCTCAGAAAATCAGCTTTCATGTTTCAAGGCAGGGAAGGGCTTCCAGAGACGAAGCTTTTCCTaGTGGGCACGTGTGCATGCC +
Preference number: 2 (lower is better)
Translates to: ICCSENQLSCFKAGKGFQRRSFS*WARVHA
Trigger: GGCATGCACACGTGCCCAGCAGGAAAAGCTTCGTCT...CTGGAAGCCCTTCCCTGCCTTGAAACATGAAAGCTGATTTTCTGAGCAGCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR TCA 90 bp GCTCAGAAAATCAGCTTTCATGTTTCAAGGCAGGGAAGGGCTTCCAGTCCCCTCGCCTTCCCATCTCTGTaGCTACAGTTCATGATTCTA +
Preference number: 2 (lower is better)
Translates to: AQKISFHVSRQGRASSPLAFPSL*LQFMIL
Trigger: TAGAATCATGAACTGTAGTCACAGAGATGGGAAGGC...GAGGGGACTGGAAGCCCTTCCCTGCCTTGAAACATGAAAGCTGATTTTCTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR GCA 90 bp GCTCAGAAAATCAGCTTTCATGTTTCAAGGCAGGGAAGGGCTTCCAGTCCCCTCCACTGCTTTAAATACTaGATGCTACGCACTTCGTGG +
Preference number: 2 (lower is better)
Translates to: AQKISFHVSRQGRASSPLHCFKY*MLRTSW
Trigger: CCACGAAGTGCGTAGCATGCAGTATTTAAAGCAGTG...GAGGGGACTGGAAGCCCTTCCCTGCCTTGAAACATGAAAGCTGATTTTCTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR GCA 90 bp ATCTGCTGCTCAGAAAATCAGCTTTCATGTTTCAAGGCAGGGAAGGGCTTCCAGCCTTCCGCAGGGAGCTaGATGGTTCTACAAAATGGT +
Preference number: 2 (lower is better)
Translates to: ICCSENQLSCFKAGKGFQPSAGS*MVLQNG
Trigger: ACCATTTTGTAGAACCATGCAGCTCCCTGCGGAAGG...CTGGAAGCCCTTCCCTGCCTTGAAACATGAAAGCTGATTTTCTGAGCAGCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR TCA 90 bp GCTCAGAAAATCAGCTTTCATGTTTCAAGGCAGGGAAGGGCTTCCAGTCCCCTCGACACTCCTGCTGCGTaGTATATACATATACACATA +
Preference number: 2 (lower is better)
Translates to: AQKISFHVSRQGRASSPLDTPAA*YIHIHI
Trigger: TATGTGTATATGTATATATCACGCAGCAGGAGTGTC...GAGGGGACTGGAAGCCCTTCCCTGCCTTGAAACATGAAAGCTGATTTTCTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR GCA 90 bp CCGCGGAATGTCCACAACACAGACATGGAACAGAACCCCATACATGCTATTAAACACTGCTTTAAATACTaGATGCTACGCACTTCGTGG +
Preference number: 2 (lower is better)
Translates to: PRNVHNTDMEQNPIHAIKHCFKY*MLRTSW
Trigger: CCACGAAGTGCGTAGCATGCAGTATTTAAAGCAGTG...TTTAATAGCATGTATGGGGTTCTGTTCCATGTCTGTGTTGTGGACATTCCGCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR GCA 72 bp GGACCAGACCCCGAGGCCAAGACGGTAACACAGCTCTaGCAGGCAGCACCTGCCTCCGGCCCCTCAAGCACA +
Preference number: 3 (lower is better)
Translates to: GPDPEAKTVTQL*QAAPASGPSST
Trigger: TGTGCTTGAGGGGCCGGAGGCAGGTGCTGCCTGGCAGAGCTGTGTTACCGTCTTGGCCTCGGGGTCTGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR TCA 72 bp CCTGACCGGCTGCAGTCACCCCTCACTGGACCAACCTaGCCGACAGCCCTGAGGCAGCTCCACCGTGCAGTT +
Preference number: 3 (lower is better)
Translates to: PDRLQSPLTGPT*PTALRQLHRAV
Trigger: AACTGCACGGTGGAGCTGCCTCAGGGCTGTCGGTCAGGTTGGTCCAGTGAGGGGTGACTGCAGCCGGTCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR TCA 72 bp GCCAGGAGGACGCGGCCCCGCCTCTCTTCTGGCAGGTaGGATCAGAGTCCTACTGCAGCCTCAAGGCTGGGA +
Preference number: 3 (lower is better)
Translates to: ARRTRPRLSSGR*DQSPTAASRLG
Trigger: TCCCAGCCTTGAGGCTGCAGTAGGACTCTGATCTCACCTGCCAGAAGAGAGGCGGGGCCGCGTCCTCCTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR TCA 72 bp AGTCACCCCTCACTGGACCAACCTGACCGACAGCCCTaGGGCAGCTCCACCGTGCAGTTCACGCGGTCATGC +
Preference number: 3 (lower is better)
Translates to: SHPSLDQPDRQP*GSSTVQFTRSC
Trigger: GCATGACCGCGTGAACTGCACGGTGGAGCTGCCTCAGGGCTGTCGGTCAGGTTGGTCCAGTGAGGGGTGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR CCA 72 bp GTCCTACTGCAGCCTCAAGGCTGGGAGCACAGAGTGTaGACCAGACCCCGAGGCCAAGACGGTAACACAGCT +
Preference number: 3 (lower is better)
Translates to: VLLQPQGWEHRV*TRPRGQDGNTA
Trigger: AGCTGTGTTACCGTCTTGGCCTCGGGGTCTGGTCCACACTCTGTGCTCCCAGCCTTGAGGCTGCAGTAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR TCA 72 bp GCTCCTCCTCTGACCACAGCTCCTCCTGGATTTAGTTaGACCCGTCAGTGTGGTAGCTGGGGTGGGAGTCGG +
Preference number: 3 (lower is better)
Translates to: APPLTTAPPGFS*TRQCGSWGGSR
Trigger: CCGACTCCCACCCCAGCTACCACACTGACGGGTTCAACTAAATCCAGGAGGAGCTGTGGTCAGAGGAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470551.1
3UTR-3UTR CAA 90 bp CAGGTGAGATCAGAGTCCTACTGCAGCCTCAAGGCTGGGAGCACAGAGTGTGGATTCATGATTCTAAGGTaGGCGTGGCCAGGCGCCGGC +
Preference number: 3 (lower is better)
Translates to: QVRSESYCSLKAGSTECGFMILR*AWPGAG
Trigger: GCCGGCGCCTGGCCACGCCAACCTTAGAATCATGAA...TCCACACTCTGTGCTCCCAGCCTTGAGGCTGCAGTAGGACTCTGATCTCACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR CCA 72 bp CTACACTGCTTTAAATACTGCATGCTACGCACTTCGTaGGTCAAGGGTCGACGCTGGGTGGGCGTGGAGGCA +
Preference number: 3 (lower is better)
Translates to: LHCFKYCMLRTS*VKGRRWVGVEA
Trigger: TGCCTCCACGCCCACCCAGCGTCGACCCTTGACCCACGAAGTGCGTAGCATGCAGTATTTAAAGCAGTGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR GCA 72 bp ACAGAAGACCGTAGCTACACTGCTTTAAATACTGCATaGTACGCACTTCGTGGGTCAAGGGTCGACGCTGGG +
Preference number: 3 (lower is better)
Translates to: TEDRSYTALNTA*YALRGSRVDAG
Trigger: CCCAGCGTCGACCCTTGACCCACGAAGTGCGTAGCATGCAGTATTTAAAGCAGTGTAGCTACGGTCTTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR CAA 90 bp CCGCGGAATGTCCACAACACAGACATGGAACAGAACCCCATACATGCTATTAAATTCATGATTCTAAGGTaGGCGTGGCCAGGCGCCGGC +
Preference number: 3 (lower is better)
Translates to: PRNVHNTDMEQNPIHAIKFMILR*AWPGAG
Trigger: GCCGGCGCCTGGCCACGCCAACCTTAGAATCATGAA...TTTAATAGCATGTATGGGGTTCTGTTCCATGTCTGTGTTGTGGACATTCCGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR-3UTR CAA 90 bp ATCTGCTGCTCAGAAAATCAGCTTTCATGTTTCAAGGCAGGGAAGGGCTTCCAGCATCTCAGGCTGAACTaGCTGCTGCACGAAGCGGCA +
Preference number: 3 (lower is better)
Translates to: ICCSENQLSCFKAGKGFQHLRLN*LLHEAA
Trigger: TGCCGCTTCGTGCAGCAGCAAGTTCAGCCTGAGATG...CTGGAAGCCCTTCCCTGCCTTGAAACATGAAAGCTGATTTTCTGAGCAGCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
3UTR TCA 72 bp TGTACTTGTCACTTCACCAGGGGACAGCAGCATGAATaGCACTCCTGCTGCGTGATATATACATATACACAT +
Preference number: 3 (lower is better)
Translates to: CTCHFTRGQQHE*HSCCVIYTYTH
Trigger: ATGTGTATATGTATATATCACGCAGCAGGAGTGTCATTCATGCTGCTGTCCCCTGGTGAAGTGACAAGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp CCCCTTCTCCTCGCCCACCTGACCGGCTGCAGTCACCCCTCACTGGACCAACCTCCCGATTCGCGGCGCTaGTGGGCAGCGGCCGACGCA +
Preference number: 4 (lower is better)
Translates to: PLLLAHLTGCSHPSLDQPPDSRR*WAAADA
Trigger: TGCGTCGGCCGCTGCCCAGCAGCGCCGCGAATCGGG...AGGTTGGTCCAGTGAGGGGTGACTGCAGCCGGTCAGGTGGGCGAGGAGAAGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR TCA 90 bp GTGCTGCCCGGACCCCCTCGTGAACCGGACGGGCCTCAAAGCACGACCCCAGAGTTCTCCTCGCCCACCTaGCCGGCTGCAGTCACCCCT +
Preference number: 4 (lower is better)
Translates to: VLPGPPREPDGPQSTTPEFSSPT*PAAVTP
Trigger: AGGGGTGACTGCAGCCGGTCAGGTGGGCGAGGAGAA...CTCTGGGGTCGTGCTTTGAGGCCCGTCCGGTTCACGAGGGGGTCCGGGCAGCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp GTGCTGCCCGGACCCCCTCGTGAACCGGACGGGCCTCAAAGCACGACCCCAGAGGCTGGGAAAGCCTCCTaGAGGTCCCTGCCCGACTCC +
Preference number: 4 (lower is better)
Translates to: VLPGPPREPDGPQSTTPEAGKAS*RSLPDS
Trigger: GGAGTCGGGCAGGGACCTGCAGGAGGCTTTCCCAGC...CTCTGGGGTCGTGCTTTGAGGCCCGTCCGGTTCACGAGGGGGTCCGGGCAGCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR CCA 90 bp CCCCTTCTCCTCGCCCACCTGACCGGCTGCAGTCACCCCTCACTGGACCAACCTCTGTGTGGACTCCTCTaGGGCGGACCCGGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PLLLAHLTGCSHPSLDQPLCGLL*GGPGAS
Trigger: GCTGGCCCCGGGTCCGCCCCAGAGGAGTCCACACAG...AGGTTGGTCCAGTGAGGGGTGACTGCAGCCGGTCAGGTGGGCGAGGAGAAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp CCCCTTCTCCTCGCCCACCTGACCGGCTGCAGTCACCCCTCACTGGACCAACCTCTGCCAGGCAGCACCTaGCTCCGGCCCCTCAAGCAC +
Preference number: 4 (lower is better)
Translates to: PLLLAHLTGCSHPSLDQPLPGST*LRPLKH
Trigger: GTGCTTGAGGGGCCGGAGGCAGGTGCTGCCTGGCAG...AGGTTGGTCCAGTGAGGGGTGACTGCAGCCGGTCAGGTGGGCGAGGAGAAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR CCA 90 bp GTGCTGCCCGGACCCCCTCGTGAACCGGACGGGCCTCAAAGCACGACCCCAGAGATTCTAAGGTTGGCGTaGCCAGGCGCCGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VLPGPPREPDGPQSTTPEILRLA*PGAGSS
Trigger: GGAGGAGCCGGCGCCTGGCCACGCCAACCTTAGAAT...CTCTGGGGTCGTGCTTTGAGGCCCGTCCGGTTCACGAGGGGGTCCGGGCAGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp GGGAAAGCCTCCTGCAGGTCCCTGCCCGACTCCCAAGAAACCAGAGGCCATTTCCCCGATTCGCGGCGCTaGTGGGCAGCGGCCGACGCA +
Preference number: 4 (lower is better)
Translates to: GKASCRSLPDSQETRGHFPDSRR*WAAADA
Trigger: TGCGTCGGCCGCTGCCCAGCAGCGCCGCGAATCGGG...GAAATGGCCTCTGGTTTCTTGGGAGTCGGGCAGGGACCTGCAGGAGGCTTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp CCCCTTCTCCTCGCCCACCTGACCGGCTGCAGTCACCCCTCACTGGACCAACCTCATGTTAGGCTATTCTaGCCGTCCGCCCGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: PLLLAHLTGCSHPSLDQPHVRLF*PSARPP
Trigger: GGGCGGGCGGGCGGACGGGCAGAATAGCCTAACATG...AGGTTGGTCCAGTGAGGGGTGACTGCAGCCGGTCAGGTGGGCGAGGAGAAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp GTGCTGCCCGGACCCCCTCGTGAACCGGACGGGCCTCAAAGCACGACCCCAGAGCTCTACAGGGACCTCTaGAACTCTGCAGCGGCCACC +
Preference number: 4 (lower is better)
Translates to: VLPGPPREPDGPQSTTPELYRDL*NSAAAT
Trigger: GGTGGCCGCTGCAGAGTTGCAGAGGTCCCTGTAGAG...CTCTGGGGTCGTGCTTTGAGGCCCGTCCGGTTCACGAGGGGGTCCGGGCAGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp CCCCTTCTCCTCGCCCACCTGACCGGCTGCAGTCACCCCTCACTGGACCAACCTGTCGGAAGCAGTCAGTaGTGCCCGGACCCCCTCGTG +
Preference number: 4 (lower is better)
Translates to: PLLLAHLTGCSHPSLDQPVGSSQ*CPDPLV
Trigger: CACGAGGGGGTCCGGGCAGCACTGACTGCTTCCGAC...AGGTTGGTCCAGTGAGGGGTGACTGCAGCCGGTCAGGTGGGCGAGGAGAAGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp GTGCTGCCCGGACCCCCTCGTGAACCGGACGGGCCTCAAAGCACGACCCCAGAGCTATACAGCAGCAGCTaGCGTGAAAGGGCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: VLPGPPREPDGPQSTTPELYSSS*RERARR
Trigger: CCTGCGGGCCCTTTCACGGCAGCTGCTGCTGTATAG...CTCTGGGGTCGTGCTTTGAGGCCCGTCCGGTTCACGAGGGGGTCCGGGCAGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR TCA 90 bp CCCCTTCTCCTCGCCCACCTGACCGGCTGCAGTCACCCCTCACTGGACCAACCTCTCACTGGACCAACCTaGCCGACAGCCCTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: PLLLAHLTGCSHPSLDQPLTGPT*PTALRQ
Trigger: CTGCCTCAGGGCTGTCGGTCAGGTTGGTCCAGTGAG...AGGTTGGTCCAGTGAGGGGTGACTGCAGCCGGTCAGGTGGGCGAGGAGAAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR TCA 90 bp ATACTGCATGCTACGCACTTCGTGGGTCAAGGGTCGACGCTGGGTGGGCGTGGAGCCCGGACCCCCTCGTaGACCGGACGGGCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: ILHATHFVGQGSTLGGRGARTPS*TGRASK
Trigger: CTTTGAGGCCCGTCCGGTTCACGAGGGGGTCCGGGC...TCCACGCCCACCCAGCGTCGACCCTTGACCCACGAAGTGCGTAGCATGCAGTAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp CCCCTTCTCCTCGCCCACCTGACCGGCTGCAGTCACCCCTCACTGGACCAACCTGGTCTCGGTGGCGGATaGCGGCTGTATGACGATCGG +
Preference number: 4 (lower is better)
Translates to: PLLLAHLTGCSHPSLDQPGLGGG*RLYDDR
Trigger: CCGATCGTCATACAGCCGGCATCCGCCACCGAGACC...AGGTTGGTCCAGTGAGGGGTGACTGCAGCCGGTCAGGTGGGCGAGGAGAAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp GTGCTGCCCGGACCCCCTCGTGAACCGGACGGGCCTCAAAGCACGACCCCAGAGCAGCGCTTCCTTCTGTaGACCTGCTGGGAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: VLPGPPREPDGPQSTTPEQRFLL*TCWESL
Trigger: GAGGCTTTCCCAGCAGGTGCACAGAAGGAAGCGCTG...CTCTGGGGTCGTGCTTTGAGGCCCGTCCGGTTCACGAGGGGGTCCGGGCAGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR CCA 90 bp ATACTGCATGCTACGCACTTCGTGGGTCAAGGGTCGACGCTGGGTGGGCGTGGAGATTCGCGGCGCTGCTaGGCAGCGGCCGACGCACTC +
Preference number: 4 (lower is better)
Translates to: ILHATHFVGQGSTLGGRGDSRRC*AAADAL
Trigger: GAGTGCGTCGGCCGCTGCCCAGCAGCGCCGCGAATC...TCCACGCCCACCCAGCGTCGACCCTTGACCCACGAAGTGCGTAGCATGCAGTAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR CCA 90 bp GGGAAAGCCTCCTGCAGGTCCCTGCCCGACTCCCAAGAAACCAGAGGCCATTTCAGGGTCGACGCTGGGTaGGCGTGGAGGCAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: GKASCRSLPDSQETRGHFRVDAG*AWRQEG
Trigger: CCCCTCCTGCCTCCACGCCCACCCAGCGTCGACCCT...GAAATGGCCTCTGGTTTCTTGGGAGTCGGGCAGGGACCTGCAGGAGGCTTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR CCA 90 bp CTCCGAGAACCAGAACGGCAGCGTCCACACGACGAGACGACCAGGCGAGAAACACTGTGTGGACTCCTCTaGGGCGGACCCGGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LREPERQRPHDETTRRETLCGLL*GGPGAS
Trigger: GCTGGCCCCGGGTCCGCCCCAGAGGAGTCCACACAG...TGTTTCTCGCCTGGTCGTCTCGTCGTGTGGACGCTGCCGTTCTGGTTCTCGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR TCA 90 bp CTCCGAGAACCAGAACGGCAGCGTCCACACGACGAGACGACCAGGCGAGAAACATCTGCGGCCCGAGAGTaGGGAGTCGGGGTCCCGTCA +
Preference number: 4 (lower is better)
Translates to: LREPERQRPHDETTRRETSAARE*GVGVPS
Trigger: TGACGGGACCCCGACTCCTCACTCTCGGGCCGCAGA...TGTTTCTCGCCTGGTCGTCTCGTCGTGTGGACGCTGCCGTTCTGGTTCTCGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp CCCCTTCTCCTCGCCCACCTGACCGGCTGCAGTCACCCCTCACTGGACCAACCTGTCAGACTGCAGCTGTaGCTCCAGATCCTCGGGGGA +
Preference number: 4 (lower is better)
Translates to: PLLLAHLTGCSHPSLDQPVRLQL*LQILGG
Trigger: TCCCCCGAGGATCTGGAGGCACAGCTGCAGTCTGAC...AGGTTGGTCCAGTGAGGGGTGACTGCAGCCGGTCAGGTGGGCGAGGAGAAGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp GGGAAAGCCTCCTGCAGGTCCCTGCCCGACTCCCAAGAAACCAGAGGCCATTTCCCCCCTGCTCCCCTATaGAGGGCGCCACCCACAAGG +
Preference number: 4 (lower is better)
Translates to: GKASCRSLPDSQETRGHFPPAPL*RAPPTR
Trigger: CCTTGTGGGTGGCGCCCTGCATAGGGGAGCAGGGGG...GAAATGGCCTCTGGTTTCTTGGGAGTCGGGCAGGGACCTGCAGGAGGCTTTCCC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp CCCCTTCTCCTCGCCCACCTGACCGGCTGCAGTCACCCCTCACTGGACCAACCTAGGCCCACTGGAGTCTaGAGCATGGCGCCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: PLLLAHLTGCSHPSLDQPRPTGV*SMAPKA
Trigger: TGCCTTTGGCGCCATGCTGCAGACTCCAGTGGGCCT...AGGTTGGTCCAGTGAGGGGTGACTGCAGCCGGTCAGGTGGGCGAGGAGAAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp GTGCTGCCCGGACCCCCTCGTGAACCGGACGGGCCTCAAAGCACGACCCCAGAGTGGGACAAACAAAGCTaGCCAGGACCTAGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: VLPGPPREPDGPQSTTPEWDKQS*PGPSAG
Trigger: GCCAGCACTAGGTCCTGGGCAGCTTTGTTTGTCCCA...CTCTGGGGTCGTGCTTTGAGGCCCGTCCGGTTCACGAGGGGGTCCGGGCAGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR CCA 90 bp CCCCTTCTCCTCGCCCACCTGACCGGCTGCAGTCACCCCTCACTGGACCAACCTCGATCGGCGTGTCTGTaGCCTCCCTCTCGTCAGACT +
Preference number: 4 (lower is better)
Translates to: PLLLAHLTGCSHPSLDQPRSACL*PPSRQT
Trigger: AGTCTGACGAGAGGGAGGCCACAGACACGCCGATCG...AGGTTGGTCCAGTGAGGGGTGACTGCAGCCGGTCAGGTGGGCGAGGAGAAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360864.9
CDS-3UTR CCA 90 bp CCCCTTCTCCTCGCCCACCTGACCGGCTGCAGTCACCCCTCACTGGACCAACCTTGGGAGCACAGAGTGTaGACCAGACCCCGAGGCCAA +
Preference number: 4 (lower is better)
Translates to: PLLLAHLTGCSHPSLDQPWEHRV*TRPRGQ
Trigger: TTGGCCTCGGGGTCTGGTCCACACTCTGTGCTCCCA...AGGTTGGTCCAGTGAGGGGTGACTGCAGCCGGTCAGGTGGGCGAGGAGAAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR CCA 90 bp CCCCTTCTCCTCGCCCACCTGACCGGCTGCAGTCACCCCTCACTGGACCAACCTCTGGCAGCCGGCTCATaGTCCACATGCGGATCTGCA +
Preference number: 4 (lower is better)
Translates to: PLLLAHLTGCSHPSLDQPLAAGS*STCGSA
Trigger: TGCAGATCCGCATGTGGACCATGAGCCGGCTGCCAG...AGGTTGGTCCAGTGAGGGGTGACTGCAGCCGGTCAGGTGGGCGAGGAGAAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR TCA 90 bp CCCCTTCTCCTCGCCCACCTGACCGGCTGCAGTCACCCCTCACTGGACCAACCTTTTTTGTGGCGTCCGTaGGGATGGCGTGCGCGTTGT +
Preference number: 4 (lower is better)
Translates to: PLLLAHLTGCSHPSLDQPFLWRP*GWRARC
Trigger: ACAACGCGCACGCCATCCTCACGGACGCCACAAAAA...AGGTTGGTCCAGTGAGGGGTGACTGCAGCCGGTCAGGTGGGCGAGGAGAAGGGG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR TCA 90 bp ATACTGCATGCTACGCACTTCGTGGGTCAAGGGTCGACGCTGGGTGGGCGTGGAGCCCAGCACATCCCATaGGCTACGGAGTGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: ILHATHFVGQGSTLGGRGAQHIP*ATECGQ
Trigger: CTGCCCGCACTCCGTAGCTCATGGGATGTGCTGGGC...TCCACGCCCACCCAGCGTCGACCCTTGACCCACGAAGTGCGTAGCATGCAGTAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR TCA 90 bp CTCCGAGAACCAGAACGGCAGCGTCCACACGACGAGACGACCAGGCGAGAAACAGCCCAGCACATCCCATaGGCTACGGAGTGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: LREPERQRPHDETTRRETAQHIP*ATECGQ
Trigger: CTGCCCGCACTCCGTAGCTCATGGGATGTGCTGGGC...TGTTTCTCGCCTGGTCGTCTCGTCGTGTGGACGCTGCCGTTCTGGTTCTCGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR TCA 90 bp CTCCGAGAACCAGAACGGCAGCGTCCACACGACGAGACGACCAGGCGAGAAACAAGGGTGGACAAGCGCTaGACTCTGCCCGCAGCACCC +
Preference number: 4 (lower is better)
Translates to: LREPERQRPHDETTRRETRVDKR*TLPAAP
Trigger: GGGTGCTGCGGGCAGAGTTCAGCGCTTGTCCACCCT...TGTTTCTCGCCTGGTCGTCTCGTCGTGTGGACGCTGCCGTTCTGGTTCTCGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp CCCCTTCTCCTCGCCCACCTGACCGGCTGCAGTCACCCCTCACTGGACCAACCTGCTCACAGCATTGTCTaGGGCCCGAGAGTGAGGAGT +
Preference number: 4 (lower is better)
Translates to: PLLLAHLTGCSHPSLDQPAHSIV*GPRVRS
Trigger: ACTCCTCACTCTCGGGCCGCAGACAATGCTGTGAGC...AGGTTGGTCCAGTGAGGGGTGACTGCAGCCGGTCAGGTGGGCGAGGAGAAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR CCA 90 bp ATACTGCATGCTACGCACTTCGTGGGTCAAGGGTCGACGCTGGGTGGGCGTGGAGTCAAGGGTCGACGCTaGGTGGGCGTGGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: ILHATHFVGQGSTLGGRGVKGRR*VGVEAG
Trigger: TCCTGCCTCCACGCCCACCCAGCGTCGACCCTTGAC...TCCACGCCCACCCAGCGTCGACCCTTGACCCACGAAGTGCGTAGCATGCAGTAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR TCA 90 bp GCCTCTCTTCTGGCAGGTGAGATCAGAGTCCTACTGCAGCCTCAAGGCTGGGAGGCTGAGGGCAATGAGTaGGCTGGGGCCACGGGTCAG +
Preference number: 4 (lower is better)
Translates to: ASLLAGEIRVLLQPQGWEAEGNE*AGATGQ
Trigger: CTGACCCGTGGCCCCAGCTCACTCATTGCCCTCAGC...CTCCCAGCCTTGAGGCTGCAGTAGGACTCTGATCTCACCTGCCAGAAGAGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR TCA 90 bp CAGTTCACGCGGTCATGCCGCGGAATGTCCACAACACAGACATGGAACAGAACCGCCCGGACCCCCTCGTaGACCGGACGGGCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: QFTRSCRGMSTTQTWNRTARTPS*TGRASK
Trigger: CTTTGAGGCCCGTCCGGTTCACGAGGGGGTCCGGGC...GGTTCTGTTCCATGTCTGTGTTGTGGACATTCCGCGGCATGACCGCGTGAACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp GCCTCTCTTCTGGCAGGTGAGATCAGAGTCCTACTGCAGCCTCAAGGCTGGGAGCATGTTAGGCTATTCTaGCCGTCCGCCCGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: ASLLAGEIRVLLQPQGWEHVRLF*PSARPP
Trigger: GGGCGGGCGGGCGGACGGGCAGAATAGCCTAACATG...CTCCCAGCCTTGAGGCTGCAGTAGGACTCTGATCTCACCTGCCAGAAGAGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp CCCCTTCTCCTCGCCCACCTGACCGGCTGCAGTCACCCCTCACTGGACCAACCTAGATCAGAGTCCTACTaGAGCCTCAAGGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: PLLLAHLTGCSHPSLDQPRSESY*SLKAGS
Trigger: GCTCCCAGCCTTGAGGCTGCAGTAGGACTCTGATCT...AGGTTGGTCCAGTGAGGGGTGACTGCAGCCGGTCAGGTGGGCGAGGAGAAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR CCA 90 bp CAGTTCACGCGGTCATGCCGCGGAATGTCCACAACACAGACATGGAACAGAACCGATTCGCGGCGCTGCTaGGCAGCGGCCGACGCACTC +
Preference number: 4 (lower is better)
Translates to: QFTRSCRGMSTTQTWNRTDSRRC*AAADAL
Trigger: GAGTGCGTCGGCCGCTGCCCAGCAGCGCCGCGAATC...GGTTCTGTTCCATGTCTGTGTTGTGGACATTCCGCGGCATGACCGCGTGAACTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR CCA 90 bp CTCCGAGAACCAGAACGGCAGCGTCCACACGACGAGACGACCAGGCGAGAAACAGAGTCGGCTGTGAGCTaGGTGGTCTCGGTGGCGGAT +
Preference number: 4 (lower is better)
Translates to: LREPERQRPHDETTRRETESAVS*VVSVAD
Trigger: ATCCGCCACCGAGACCACCCAGCTCACAGCCGACTC...TGTTTCTCGCCTGGTCGTCTCGTCGTGTGGACGCTGCCGTTCTGGTTCTCGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR TCA 90 bp GGGAAAGCCTCCTGCAGGTCCCTGCCCGACTCCCAAGAAACCAGAGGCCATTTCTCCCGCAGCAGCAGTTaGAGCAGCAGCACAGACAGC +
Preference number: 4 (lower is better)
Translates to: GKASCRSLPDSQETRGHFSRSSS*SSSTDS
Trigger: GCTGTCTGTGCTGCTGCTTCAACTGCTGCTGCGGGA...GAAATGGCCTCTGGTTTCTTGGGAGTCGGGCAGGGACCTGCAGGAGGCTTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR TCA 90 bp CAGGTGAGATCAGAGTCCTACTGCAGCCTCAAGGCTGGGAGCACAGAGTGTGGATTCTCCTCGCCCACCTaGCCGGCTGCAGTCACCCCT +
Preference number: 4 (lower is better)
Translates to: QVRSESYCSLKAGSTECGFSSPT*PAAVTP
Trigger: AGGGGTGACTGCAGCCGGTCAGGTGGGCGAGGAGAA...TCCACACTCTGTGCTCCCAGCCTTGAGGCTGCAGTAGGACTCTGATCTCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR TCA 90 bp CCCCTTCTCCTCGCCCACCTGACCGGCTGCAGTCACCCCTCACTGGACCAACCTCTCTCTTCTGGCAGGTaGGATCAGAGTCCTACTGCA +
Preference number: 4 (lower is better)
Translates to: PLLLAHLTGCSHPSLDQPLSSGR*DQSPTA
Trigger: TGCAGTAGGACTCTGATCTCACCTGCCAGAAGAGAG...AGGTTGGTCCAGTGAGGGGTGACTGCAGCCGGTCAGGTGGGCGAGGAGAAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp GCCTCTCTTCTGGCAGGTGAGATCAGAGTCCTACTGCAGCCTCAAGGCTGGGAGGAGGCAGCTCCACCGTaGAGTTCACGCGGTCATGCC +
Preference number: 4 (lower is better)
Translates to: ASLLAGEIRVLLQPQGWEEAAPP*SSRGHA
Trigger: GGCATGACCGCGTGAACTGCACGGTGGAGCTGCCTC...CTCCCAGCCTTGAGGCTGCAGTAGGACTCTGATCTCACCTGCCAGAAGAGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp CTCCGAGAACCAGAACGGCAGCGTCCACACGACGAGACGACCAGGCGAGAAACATCGGGGTCCCGTCACTaGCACCAGCAAAAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LREPERQRPHDETTRRETSGSRH*HQQKQA
Trigger: TGCCTGCTTTTGCTGGTGGCAGTGACGGGACCCCGA...TGTTTCTCGCCTGGTCGTCTCGTCGTGTGGACGCTGCCGTTCTGGTTCTCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp CAGGTGAGATCAGAGTCCTACTGCAGCCTCAAGGCTGGGAGCACAGAGTGTGGAGTCGGAAGCAGTCAGTaGTGCCCGGACCCCCTCGTG +
Preference number: 4 (lower is better)
Translates to: QVRSESYCSLKAGSTECGVGSSQ*CPDPLV
Trigger: CACGAGGGGGTCCGGGCAGCACTGACTGCTTCCGAC...TCCACACTCTGTGCTCCCAGCCTTGAGGCTGCAGTAGGACTCTGATCTCACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp GGGAAAGCCTCCTGCAGGTCCCTGCCCGACTCCCAAGAAACCAGAGGCCATTTCCTATACAGCAGCAGCTaGCGTGAAAGGGCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: GKASCRSLPDSQETRGHFLYSSS*RERARR
Trigger: CCTGCGGGCCCTTTCACGGCAGCTGCTGCTGTATAG...GAAATGGCCTCTGGTTTCTTGGGAGTCGGGCAGGGACCTGCAGGAGGCTTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp CTCCGAGAACCAGAACGGCAGCGTCCACACGACGAGACGACCAGGCGAGAAACACAGTGGCAGCCTGCATaGTGGTGCCCTTCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: LREPERQRPHDETTRRETQWQPA*WCPSLQ
Trigger: CTGCAAGGAAGGGCACCAGCATGCAGGCTGCCACTG...TGTTTCTCGCCTGGTCGTCTCGTCGTGTGGACGCTGCCGTTCTGGTTCTCGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp GGGAAAGCCTCCTGCAGGTCCCTGCCCGACTCCCAAGAAACCAGAGGCCATTTCCAGTGGCAGCCTGCATaGTGGTGCCCTTCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: GKASCRSLPDSQETRGHFQWQPA*WCPSLQ
Trigger: CTGCAAGGAAGGGCACCAGCATGCAGGCTGCCACTG...GAAATGGCCTCTGGTTTCTTGGGAGTCGGGCAGGGACCTGCAGGAGGCTTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp GTGCTGCCCGGACCCCCTCGTGAACCGGACGGGCCTCAAAGCACGACCCCAGAGGCCACTGACCGTATCTaGTGCTCAGAAAATCAGCTT +
Preference number: 4 (lower is better)
Translates to: VLPGPPREPDGPQSTTPEATDRI*CSENQL
Trigger: AAGCTGATTTTCTGAGCAGCAGATACGGTCAGTGGC...CTCTGGGGTCGTGCTTTGAGGCCCGTCCGGTTCACGAGGGGGTCCGGGCAGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp GGGAAAGCCTCCTGCAGGTCCCTGCCCGACTCCCAAGAAACCAGAGGCCATTTCCCCCTCTCGTCAGACTaGAGCTGTGCCTCCAGATCC +
Preference number: 4 (lower is better)
Translates to: GKASCRSLPDSQETRGHFPLSSD*SCASRS
Trigger: GGATCTGGAGGCACAGCTGCAGTCTGACGAGAGGGG...GAAATGGCCTCTGGTTTCTTGGGAGTCGGGCAGGGACCTGCAGGAGGCTTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470551.1
CDS-3UTR CCA 90 bp ATACTGCATGCTACGCACTTCGTGGGTCAAGGGTCGACGCTGGGTGGGCGTGGACTGCACAGCCTCGGGTaGCTGCTGAGGGCAATGAGT +
Preference number: 4 (lower is better)
Translates to: ILHATHFVGQGSTLGGRGLHSLG*LLRAMS
Trigger: ACTCATTGCCCTCAGCAGCCACCCGAGGCTGTGCAG...TCCACGCCCACCCAGCGTCGACCCTTGACCCACGAAGTGCGTAGCATGCAGTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR CCA 90 bp CAGGTGAGATCAGAGTCCTACTGCAGCCTCAAGGCTGGGAGCACAGAGTGTGGAAGCAGAGGCCAATGCTaGTGGGGGCCGTGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: QVRSESYCSLKAGSTECGSRGQC*WGPWQC
Trigger: GCACTGCCACGGCCCCCACCAGCATTGGCCTCTGCT...TCCACACTCTGTGCTCCCAGCCTTGAGGCTGCAGTAGGACTCTGATCTCACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR CCA 90 bp CTCCGAGAACCAGAACGGCAGCGTCCACACGACGAGACGACCAGGCGAGAAACACGATCGGCGTGTCTGTaGCCTCTCAGGGTCCACGTT +
Preference number: 4 (lower is better)
Translates to: LREPERQRPHDETTRRETRSACL*PLRVHV
Trigger: AACGTGGACCCTGAGAGGCCACAGACACGCCGATCG...TGTTTCTCGCCTGGTCGTCTCGTCGTGTGGACGCTGCCGTTCTGGTTCTCGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470551.1
CDS-3UTR TCA 90 bp GTGCTGCCCGGACCCCCTCGTGAACCGGACGGGCCTCAAAGCACGACCCCAGAGGCCTTCCCATCTCTGTaGCTACAGTTCATGATTCTA +
Preference number: 4 (lower is better)
Translates to: VLPGPPREPDGPQSTTPEAFPSL*LQFMIL
Trigger: TAGAATCATGAACTGTAGTCACAGAGATGGGAAGGC...CTCTGGGGTCGTGCTTTGAGGCCCGTCCGGTTCACGAGGGGGTCCGGGCAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR TCA 90 bp ATACTGCATGCTACGCACTTCGTGGGTCAAGGGTCGACGCTGGGTGGGCGTGGATGGCAGCAGCCGACGTaGAGACGAAGCTTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: ILHATHFVGQGSTLGGRGWQQPT*RRSFSC
Trigger: GCAGGAAAAGCTTCGTCTTCACGTCGGCTGCTGCCA...TCCACGCCCACCCAGCGTCGACCCTTGACCCACGAAGTGCGTAGCATGCAGTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp CTCCGAGAACCAGAACGGCAGCGTCCACACGACGAGACGACCAGGCGAGAAACATCCCTCTCGTCAGACTaGAGCTGTGCCTCCAGATCC +
Preference number: 4 (lower is better)
Translates to: LREPERQRPHDETTRRETSLSSD*SCASRS
Trigger: GGATCTGGAGGCACAGCTGCAGTCTGACGAGAGGGA...TGTTTCTCGCCTGGTCGTCTCGTCGTGTGGACGCTGCCGTTCTGGTTCTCGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360864.9
CDS-3UTR GCA 90 bp CTTCCCATCTCTGTGACTACAGTTCATGATTCTAAGGTTGGCGTGGCCAGGCGCCAGACCCGTTCCCCCTaGTCCCCTATGCAGGGCGCC +
Preference number: 4 (lower is better)
Translates to: LPISVTTVHDSKVGVARRQTRSP*SPMQGA
Trigger: GGCGCCCTGCATAGGGGAGCAGGGGGAACGGGTCTG...GCGCCTGGCCACGCCAACCTTAGAATCATGAACTGTAGTCACAGAGATGGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp GCCTCTCTTCTGGCAGGTGAGATCAGAGTCCTACTGCAGCCTCAAGGCTGGGAGCTGAACCTACCCTTCTaGACAGCCTCGGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: ASLLAGEIRVLLQPQGWELNLPF*TASGGC
Trigger: GCAGCCACCCGAGGCTGTGCAGAAGGGTAGGTTCAG...CTCCCAGCCTTGAGGCTGCAGTAGGACTCTGATCTCACCTGCCAGAAGAGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp GGGAAAGCCTCCTGCAGGTCCCTGCCCGACTCCCAAGAAACCAGAGGCCATTTCGGCTCATGGTCCACATaGGGATCTGCAGTAGGGGTC +
Preference number: 4 (lower is better)
Translates to: GKASCRSLPDSQETRGHFGSWST*GSAVGV
Trigger: GACCCCTACTGCAGATCCGCATGTGGACCATGAGCC...GAAATGGCCTCTGGTTTCTTGGGAGTCGGGCAGGGACCTGCAGGAGGCTTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp CTCCGAGAACCAGAACGGCAGCGTCCACACGACGAGACGACCAGGCGAGAAACACAGCCTGCATGCTGGTaGCCTTCCTTGCAGCACAAG +
Preference number: 4 (lower is better)
Translates to: LREPERQRPHDETTRRETQPACW*PSLQHK
Trigger: CTTGTGCTGCAAGGAAGGGCACCAGCATGCAGGCTG...TGTTTCTCGCCTGGTCGTCTCGTCGTGTGGACGCTGCCGTTCTGGTTCTCGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp ATACTGCATGCTACGCACTTCGTGGGTCAAGGGTCGACGCTGGGTGGGCGTGGACAGCGCTTCCTTCTGTaGACCTGCTGGGAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: ILHATHFVGQGSTLGGRGQRFLL*TCWESL
Trigger: GAGGCTTTCCCAGCAGGTGCACAGAAGGAAGCGCTG...TCCACGCCCACCCAGCGTCGACCCTTGACCCACGAAGTGCGTAGCATGCAGTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR CCA 90 bp ATACTGCATGCTACGCACTTCGTGGGTCAAGGGTCGACGCTGGGTGGGCGTGGAAGACAAACAGGGCCTTaGCCCACCAGCTGGACAGCA +
Preference number: 4 (lower is better)
Translates to: ILHATHFVGQGSTLGGRGRQTGP*PTSWTA
Trigger: TGCTGTCCAGCTGGTGGGCCAAGGCCCTGTTTGTCT...TCCACGCCCACCCAGCGTCGACCCTTGACCCACGAAGTGCGTAGCATGCAGTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR CCA 90 bp GCTCAGAAAATCAGCTTTCATGTTTCAAGGCAGGGAAGGGCTTCCAGTCCCCTCAGGGTCGACGCTGGGTaGGCGTGGAGGCAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: AQKISFHVSRQGRASSPLRVDAG*AWRQEG
Trigger: CCCCTCCTGCCTCCACGCCCACCCAGCGTCGACCCT...GAGGGGACTGGAAGCCCTTCCCTGCCTTGAAACATGAAAGCTGATTTTCTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR TCA 90 bp ATACTGCATGCTACGCACTTCGTGGGTCAAGGGTCGACGCTGGGTGGGCGTGGAGGACACGCAAGAGACTaGCTTCCCATGGTCCACATG +
Preference number: 4 (lower is better)
Translates to: ILHATHFVGQGSTLGGRGGHARD*LPMVHM
Trigger: CATGTGGACCATGGGAAGTCAGTCTCTTGCGTGTCC...TCCACGCCCACCCAGCGTCGACCCTTGACCCACGAAGTGCGTAGCATGCAGTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR TCA 90 bp CTTCCCATCTCTGTGACTACAGTTCATGATTCTAAGGTTGGCGTGGCCAGGCGCCCGGAACAGAACGCCTaGGAGCAGCCTCGACGGCGT +
Preference number: 4 (lower is better)
Translates to: LPISVTTVHDSKVGVARRPEQNA*EQPRRR
Trigger: ACGCCGTCGAGGCTGCTCTCAGGCGTTCTGTTCCGG...GCGCCTGGCCACGCCAACCTTAGAATCATGAACTGTAGTCACAGAGATGGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp CAGTTCACGCGGTCATGCCGCGGAATGTCCACAACACAGACATGGAACAGAACCGAGGCAGCTCCACCGTaGAGTTCACGCGGTCATGCC +
Preference number: 4 (lower is better)
Translates to: QFTRSCRGMSTTQTWNRTEAAPP*SSRGHA
Trigger: GGCATGACCGCGTGAACTGCACGGTGGAGCTGCCTC...GGTTCTGTTCCATGTCTGTGTTGTGGACATTCCGCGGCATGACCGCGTGAACTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp GCTCAGAAAATCAGCTTTCATGTTTCAAGGCAGGGAAGGGCTTCCAGTCCCCTCCTGCCAGGCAGCACCTaGCTCCGGCCCCTCAAGCAC +
Preference number: 4 (lower is better)
Translates to: AQKISFHVSRQGRASSPLLPGST*LRPLKH
Trigger: GTGCTTGAGGGGCCGGAGGCAGGTGCTGCCTGGCAG...GAGGGGACTGGAAGCCCTTCCCTGCCTTGAAACATGAAAGCTGATTTTCTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp CAGGTGAGATCAGAGTCCTACTGCAGCCTCAAGGCTGGGAGCACAGAGTGTGGAACGGTAACACAGCTCTaGCAGGCAGCACCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: QVRSESYCSLKAGSTECGTVTQL*QAAPAS
Trigger: GGAGGCAGGTGCTGCCTGGCAGAGCTGTGTTACCGT...TCCACACTCTGTGCTCCCAGCCTTGAGGCTGCAGTAGGACTCTGATCTCACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp CAGGTGAGATCAGAGTCCTACTGCAGCCTCAAGGCTGGGAGCACAGAGTGTGGATCGGGGTCCCGTCACTaGCACCAGCAAAAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: QVRSESYCSLKAGSTECGSGSRH*HQQKQA
Trigger: TGCCTGCTTTTGCTGGTGGCAGTGACGGGACCCCGA...TCCACACTCTGTGCTCCCAGCCTTGAGGCTGCAGTAGGACTCTGATCTCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp ATACTGCATGCTACGCACTTCGTGGGTCAAGGGTCGACGCTGGGTGGGCGTGGAAGACGAAGCTTTTCCTaGTGGGCACGTGTGCATGCC +
Preference number: 4 (lower is better)
Translates to: ILHATHFVGQGSTLGGRGRRSFS*WARVHA
Trigger: GGCATGCACACGTGCCCAGCAGGAAAAGCTTCGTCT...TCCACGCCCACCCAGCGTCGACCCTTGACCCACGAAGTGCGTAGCATGCAGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp CAGTTCACGCGGTCATGCCGCGGAATGTCCACAACACAGACATGGAACAGAACCGACACAGGCCAGTCCTaGGCCACAGGGGTTCACAGC +
Preference number: 4 (lower is better)
Translates to: QFTRSCRGMSTTQTWNRTDTGQS*ATGVHS
Trigger: GCTGTGAACCCCTGTGGCGCAGGACTGGCCTGTGTC...GGTTCTGTTCCATGTCTGTGTTGTGGACATTCCGCGGCATGACCGCGTGAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp GTGCTGCCCGGACCCCCTCGTGAACCGGACGGGCCTCAAAGCACGACCCCAGAGACTGACCGTATCTGCTaGTCAGAAAATCAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: VLPGPPREPDGPQSTTPETDRIC*SENQLS
Trigger: TGAAAGCTGATTTTCTGAGCAGCAGATACGGTCAGT...CTCTGGGGTCGTGCTTTGAGGCCCGTCCGGTTCACGAGGGGGTCCGGGCAGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR CCA 90 bp CAGGTGAGATCAGAGTCCTACTGCAGCCTCAAGGCTGGGAGCACAGAGTGTGGAGCCCCGCCTCTCTTCTaGCAGGTGAGATCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: QVRSESYCSLKAGSTECGAPPLF*QVRSES
Trigger: GGACTCTGATCTCACCTGCCAGAAGAGAGGCGGGGC...TCCACACTCTGTGCTCCCAGCCTTGAGGCTGCAGTAGGACTCTGATCTCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR CCA 90 bp CAGGTGAGATCAGAGTCCTACTGCAGCCTCAAGGCTGGGAGCACAGAGTGTGGATGGCAGCCTGCATGCTaGTGCCCTTCCTTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: QVRSESYCSLKAGSTECGWQPAC*CPSLQH
Trigger: GTGCTGCAAGGAAGGGCACCAGCATGCAGGCTGCCA...TCCACACTCTGTGCTCCCAGCCTTGAGGCTGCAGTAGGACTCTGATCTCACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR TCA 90 bp GGGAAAGCCTCCTGCAGGTCCCTGCCCGACTCCCAAGAAACCAGAGGCCATTTCCCTCCTGGATTTAGTTaGACCCGTCAGTGTGGTAGC +
Preference number: 4 (lower is better)
Translates to: GKASCRSLPDSQETRGHFPPGFS*TRQCGS
Trigger: GCTACCACACTGACGGGTTCAACTAAATCCAGGAGG...GAAATGGCCTCTGGTTTCTTGGGAGTCGGGCAGGGACCTGCAGGAGGCTTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR TCA 90 bp CCCCTTCTCCTCGCCCACCTGACCGGCTGCAGTCACCCCTCACTGGACCAACCTGCCTTCCCATCTCTGTaGCTACAGTTCATGATTCTA +
Preference number: 4 (lower is better)
Translates to: PLLLAHLTGCSHPSLDQPAFPSL*LQFMIL
Trigger: TAGAATCATGAACTGTAGTCACAGAGATGGGAAGGC...AGGTTGGTCCAGTGAGGGGTGACTGCAGCCGGTCAGGTGGGCGAGGAGAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR TCA 90 bp GGGAAAGCCTCCTGCAGGTCCCTGCCCGACTCCCAAGAAACCAGAGGCCATTTCGCACAATCTACTCTCTaGCTGTGGCTCATTGGGCTG +
Preference number: 4 (lower is better)
Translates to: GKASCRSLPDSQETRGHFAQSTL*LWLIGL
Trigger: CAGCCCAATGAGCCACAGTCAGAGAGTAGATTGTGC...GAAATGGCCTCTGGTTTCTTGGGAGTCGGGCAGGGACCTGCAGGAGGCTTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR TCA 90 bp CAGGTGAGATCAGAGTCCTACTGCAGCCTCAAGGCTGGGAGCACAGAGTGTGGATGGCAGCAGCCGACGTaGAGACGAAGCTTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: QVRSESYCSLKAGSTECGWQQPT*RRSFSC
Trigger: GCAGGAAAAGCTTCGTCTTCACGTCGGCTGCTGCCA...TCCACACTCTGTGCTCCCAGCCTTGAGGCTGCAGTAGGACTCTGATCTCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR TCA 90 bp CCCCTTCTCCTCGCCCACCTGACCGGCTGCAGTCACCCCTCACTGGACCAACCTAATACTGGGAAAGGGTaGGATCAGTCATTTCGTGTC +
Preference number: 4 (lower is better)
Translates to: PLLLAHLTGCSHPSLDQPNTGKG*DQSFRV
Trigger: GACACGAAATGACTGATCTCACCCTTTCCCAGTATT...AGGTTGGTCCAGTGAGGGGTGACTGCAGCCGGTCAGGTGGGCGAGGAGAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR TCA 90 bp ATACTGCATGCTACGCACTTCGTGGGTCAAGGGTCGACGCTGGGTGGGCGTGGACACACTCACAGCATGTaGCGACGCAAACTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: ILHATHFVGQGSTLGGRGHTHSM*RRKLLL
Trigger: CAGCAACAGTTTGCGTCGTCACATGCTGTGAGTGTG...TCCACGCCCACCCAGCGTCGACCCTTGACCCACGAAGTGCGTAGCATGCAGTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR TCA 90 bp CAGGTGAGATCAGAGTCCTACTGCAGCCTCAAGGCTGGGAGCACAGAGTGTGGACAGGGGACAGCAGCATaGATGACACTCCTGCTGCGT +
Preference number: 4 (lower is better)
Translates to: QVRSESYCSLKAGSTECGQGTAA*MTLLLR
Trigger: ACGCAGCAGGAGTGTCATTCATGCTGCTGTCCCCTG...TCCACACTCTGTGCTCCCAGCCTTGAGGCTGCAGTAGGACTCTGATCTCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp CCCCTTCTCCTCGCCCACCTGACCGGCTGCAGTCACCCCTCACTGGACCAACCTGCTTTAAATACTGCATaGTACGCACTTCGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: PLLLAHLTGCSHPSLDQPALNTA*YALRGS
Trigger: TGACCCACGAAGTGCGTAGCATGCAGTATTTAAAGC...AGGTTGGTCCAGTGAGGGGTGACTGCAGCCGGTCAGGTGGGCGAGGAGAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp GCCTCTCTTCTGGCAGGTGAGATCAGAGTCCTACTGCAGCCTCAAGGCTGGGAGAGATCAGAGTCCTACTaGAGCCTCAAGGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: ASLLAGEIRVLLQPQGWERSESY*SLKAGS
Trigger: GCTCCCAGCCTTGAGGCTGCAGTAGGACTCTGATCT...CTCCCAGCCTTGAGGCTGCAGTAGGACTCTGATCTCACCTGCCAGAAGAGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp CAGGTGAGATCAGAGTCCTACTGCAGCCTCAAGGCTGGGAGCACAGAGTGTGGAGGCTCATGGTCCACATaGGGATCTGCAGTAGGGGTC +
Preference number: 4 (lower is better)
Translates to: QVRSESYCSLKAGSTECGGSWST*GSAVGV
Trigger: GACCCCTACTGCAGATCCGCATGTGGACCATGAGCC...TCCACACTCTGTGCTCCCAGCCTTGAGGCTGCAGTAGGACTCTGATCTCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp GCTCAGAAAATCAGCTTTCATGTTTCAAGGCAGGGAAGGGCTTCCAGTCCCCTCGCTGGTGCCCTTCCTTaGAGCACAAGCCTCGCCCGG +
Preference number: 4 (lower is better)
Translates to: AQKISFHVSRQGRASSPLAGALP*STSLAR
Trigger: CCGGGCGAGGCTTGTGCTGCAAGGAAGGGCACCAGC...GAGGGGACTGGAAGCCCTTCCCTGCCTTGAAACATGAAAGCTGATTTTCTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR CCA 90 bp CAGTTCACGCGGTCATGCCGCGGAATGTCCACAACACAGACATGGAACAGAACCGCCCCGCCTCTCTTCTaGCAGGTGAGATCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: QFTRSCRGMSTTQTWNRTAPPLF*QVRSES
Trigger: GGACTCTGATCTCACCTGCCAGAAGAGAGGCGGGGC...GGTTCTGTTCCATGTCTGTGTTGTGGACATTCCGCGGCATGACCGCGTGAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR CCA 90 bp CAGGTGAGATCAGAGTCCTACTGCAGCCTCAAGGCTGGGAGCACAGAGTGTGGATTCAGGAGGCTCATCTaGTTGGTCCGAGCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: QVRSESYCSLKAGSTECGFRRLI*LVRARA
Trigger: GGCTCTGGCTCGGACCAACCAGATGAGCCTCCTGAA...TCCACACTCTGTGCTCCCAGCCTTGAGGCTGCAGTAGGACTCTGATCTCACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR TCA 90 bp GCCTCTCTTCTGGCAGGTGAGATCAGAGTCCTACTGCAGCCTCAAGGCTGGGAGCCTCCTGGATTTAGTTaGACCCGTCAGTGTGGTAGC +
Preference number: 4 (lower is better)
Translates to: ASLLAGEIRVLLQPQGWEPPGFS*TRQCGS
Trigger: GCTACCACACTGACGGGTTCAACTAAATCCAGGAGG...CTCCCAGCCTTGAGGCTGCAGTAGGACTCTGATCTCACCTGCCAGAAGAGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR TCA 90 bp ATCTGCTGCTCAGAAAATCAGCTTTCATGTTTCAAGGCAGGGAAGGGCTTCCAGTCTGCGGCCCGAGAGTaGGGAGTCGGGGTCCCGTCA +
Preference number: 4 (lower is better)
Translates to: ICCSENQLSCFKAGKGFQSAARE*GVGVPS
Trigger: TGACGGGACCCCGACTCCTCACTCTCGGGCCGCAGA...CTGGAAGCCCTTCCCTGCCTTGAAACATGAAAGCTGATTTTCTGAGCAGCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp ATCTGCTGCTCAGAAAATCAGCTTTCATGTTTCAAGGCAGGGAAGGGCTTCCAGCAGACCCGTTCCCCCTaGTCCCCTATGCAGGGCGCC +
Preference number: 4 (lower is better)
Translates to: ICCSENQLSCFKAGKGFQQTRSP*SPMQGA
Trigger: GGCGCCCTGCATAGGGGAGCAGGGGGAACGGGTCTG...CTGGAAGCCCTTCCCTGCCTTGAAACATGAAAGCTGATTTTCTGAGCAGCAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp CTTCCCATCTCTGTGACTACAGTTCATGATTCTAAGGTTGGCGTGGCCAGGCGCAGGCCCACTGGAGTCTaGAGCATGGCGCCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: LPISVTTVHDSKVGVARRRPTGV*SMAPKA
Trigger: TGCCTTTGGCGCCATGCTGCAGACTCCAGTGGGCCT...GCGCCTGGCCACGCCAACCTTAGAATCATGAACTGTAGTCACAGAGATGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp CAGTTCACGCGGTCATGCCGCGGAATGTCCACAACACAGACATGGAACAGAACCGGACCTCTGCAACTCTaGAGCGGCCACCATGGACAT +
Preference number: 4 (lower is better)
Translates to: QFTRSCRGMSTTQTWNRTGPLQL*SGHHGH
Trigger: ATGTCCATGGTGGCCGCTGCAGAGTTGCAGAGGTCC...GGTTCTGTTCCATGTCTGTGTTGTGGACATTCCGCGGCATGACCGCGTGAACTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp GGGAAAGCCTCCTGCAGGTCCCTGCCCGACTCCCAAGAAACCAGAGGCCATTTCCCTTCCGCAGGGAGCTaGATGGTTCTACAAAATGGT +
Preference number: 4 (lower is better)
Translates to: GKASCRSLPDSQETRGHFPSAGS*MVLQNG
Trigger: ACCATTTTGTAGAACCATGCAGCTCCCTGCGGAAGG...GAAATGGCCTCTGGTTTCTTGGGAGTCGGGCAGGGACCTGCAGGAGGCTTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp CAGTTCACGCGGTCATGCCGCGGAATGTCCACAACACAGACATGGAACAGAACCGCTCACAGCATTGTCTaGGGCCCGAGAGTGAGGAGT +
Preference number: 4 (lower is better)
Translates to: QFTRSCRGMSTTQTWNRTAHSIV*GPRVRS
Trigger: ACTCCTCACTCTCGGGCCGCAGACAATGCTGTGAGC...GGTTCTGTTCCATGTCTGTGTTGTGGACATTCCGCGGCATGACCGCGTGAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp CAGTTCACGCGGTCATGCCGCGGAATGTCCACAACACAGACATGGAACAGAACCGCCCATGGCCACACTTaGTCACAGCATTGTCTGCGG +
Preference number: 4 (lower is better)
Translates to: QFTRSCRGMSTTQTWNRTAHGHT*SQHCLR
Trigger: CCGCAGACAATGCTGTGAGCAAGTGTGGCCATGGGC...GGTTCTGTTCCATGTCTGTGTTGTGGACATTCCGCGGCATGACCGCGTGAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp GCTCAGAAAATCAGCTTTCATGTTTCAAGGCAGGGAAGGGCTTCCAGTCCCCTCGGAAGCAGTCAGTGCTaGCCGGACCCCCTCGTGAAC +
Preference number: 4 (lower is better)
Translates to: AQKISFHVSRQGRASSPLGSSQC*PDPLVN
Trigger: GTTCACGAGGGGGTCCGGGCAGCACTGACTGCTTCC...GAGGGGACTGGAAGCCCTTCCCTGCCTTGAAACATGAAAGCTGATTTTCTGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp CTTCCCATCTCTGTGACTACAGTTCATGATTCTAAGGTTGGCGTGGCCAGGCGCCGCTCCTACGCCTCCTaGAGGTCGGAAGCAGTCAGT +
Preference number: 4 (lower is better)
Translates to: LPISVTTVHDSKVGVARRRSYAS*RSEAVS
Trigger: ACTGACTGCTTCCGACCTGCAGGAGGCGTAGGAGCG...GCGCCTGGCCACGCCAACCTTAGAATCATGAACTGTAGTCACAGAGATGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp CTTCCCATCTCTGTGACTACAGTTCATGATTCTAAGGTTGGCGTGGCCAGGCGCATGGGCACCCCACCCTaGAGAGCAGAGGCCAATGCT +
Preference number: 4 (lower is better)
Translates to: LPISVTTVHDSKVGVARRMGTPP*RAEANA
Trigger: AGCATTGGCCTCTGCTCTGCAGGGTGGGGTGCCCAT...GCGCCTGGCCACGCCAACCTTAGAATCATGAACTGTAGTCACAGAGATGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR CCA 90 bp GGGAAAGCCTCCTGCAGGTCCCTGCCCGACTCCCAAGAAACCAGAGGCCATTTCAGTGAGCGCTGTCTCTaGTCTGCCATGTTAGGCTAT +
Preference number: 4 (lower is better)
Translates to: GKASCRSLPDSQETRGHFSERCL*SAMLGY
Trigger: ATAGCCTAACATGGCAGACCAGAGACAGCGCTCACT...GAAATGGCCTCTGGTTTCTTGGGAGTCGGGCAGGGACCTGCAGGAGGCTTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR CCA 90 bp CTTCCCATCTCTGTGACTACAGTTCATGATTCTAAGGTTGGCGTGGCCAGGCGCCTGCACAGCCTCGGGTaGCTGCTGAGGGCAATGAGT +
Preference number: 4 (lower is better)
Translates to: LPISVTTVHDSKVGVARRLHSLG*LLRAMS
Trigger: ACTCATTGCCCTCAGCAGCCACCCGAGGCTGTGCAG...GCGCCTGGCCACGCCAACCTTAGAATCATGAACTGTAGTCACAGAGATGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR CCA 90 bp CTTCCCATCTCTGTGACTACAGTTCATGATTCTAAGGTTGGCGTGGCCAGGCGCTGGCAGCCTGCATGCTaGTGCCCTTCCTTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: LPISVTTVHDSKVGVARRWQPAC*CPSLQH
Trigger: GTGCTGCAAGGAAGGGCACCAGCATGCAGGCTGCCA...GCGCCTGGCCACGCCAACCTTAGAATCATGAACTGTAGTCACAGAGATGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR CCA 90 bp GGGAAAGCCTCCTGCAGGTCCCTGCCCGACTCCCAAGAAACCAGAGGCCATTTCGACAAAACCAGTGCATaGACAAGCAGCTTCCATGCG +
Preference number: 4 (lower is better)
Translates to: GKASCRSLPDSQETRGHFDKTSA*TSSFHA
Trigger: CGCATGGAAGCTGCTTGTCCATGCACTGGTTTTGTC...GAAATGGCCTCTGGTTTCTTGGGAGTCGGGCAGGGACCTGCAGGAGGCTTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR TCA 90 bp CCGCGGAATGTCCACAACACAGACATGGAACAGAACCCCATACATGCTATTAAACCTGACCGACAGCCCTaGGGCAGCTCCACCGTGCAG +
Preference number: 4 (lower is better)
Translates to: PRNVHNTDMEQNPIHAIKPDRQP*GSSTVQ
Trigger: CTGCACGGTGGAGCTGCCTCAGGGCTGTCGGTCAGG...TTTAATAGCATGTATGGGGTTCTGTTCCATGTCTGTGTTGTGGACATTCCGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR TCA 90 bp CAGTTCACGCGGTCATGCCGCGGAATGTCCACAACACAGACATGGAACAGAACCGGACACGCAAGAGACTaGCTTCCCATGGTCCACATG +
Preference number: 4 (lower is better)
Translates to: QFTRSCRGMSTTQTWNRTGHARD*LPMVHM
Trigger: CATGTGGACCATGGGAAGTCAGTCTCTTGCGTGTCC...GGTTCTGTTCCATGTCTGTGTTGTGGACATTCCGCGGCATGACCGCGTGAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR TCA 90 bp ATCTGCTGCTCAGAAAATCAGCTTTCATGTTTCAAGGCAGGGAAGGGCTTCCAGCCGGAACAGAACGCCTaGGAGCAGCCTCGACGGCGT +
Preference number: 4 (lower is better)
Translates to: ICCSENQLSCFKAGKGFQPEQNA*EQPRRR
Trigger: ACGCCGTCGAGGCTGCTCTCAGGCGTTCTGTTCCGG...CTGGAAGCCCTTCCCTGCCTTGAAACATGAAAGCTGATTTTCTGAGCAGCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR TCA 90 bp CTTCCCATCTCTGTGACTACAGTTCATGATTCTAAGGTTGGCGTGGCCAGGCGCCAGGGGACAGCAGCATaGATGACACTCCTGCTGCGT +
Preference number: 4 (lower is better)
Translates to: LPISVTTVHDSKVGVARRQGTAA*MTLLLR
Trigger: ACGCAGCAGGAGTGTCATTCATGCTGCTGTCCCCTG...GCGCCTGGCCACGCCAACCTTAGAATCATGAACTGTAGTCACAGAGATGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp CAGTTCACGCGGTCATGCCGCGGAATGTCCACAACACAGACATGGAACAGAACCCAGTTCACGCGGTCATaGCGCGGAATGTCCACAACA +
Preference number: 4 (lower is better)
Translates to: QFTRSCRGMSTTQTWNRTQFTRS*RGMSTT
Trigger: TGTTGTGGACATTCCGCGGCATGACCGCGTGAACTG...GGTTCTGTTCCATGTCTGTGTTGTGGACATTCCGCGGCATGACCGCGTGAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp GCTCAGAAAATCAGCTTTCATGTTTCAAGGCAGGGAAGGGCTTCCAGTCCCCTCACGGTAACACAGCTCTaGCAGGCAGCACCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: AQKISFHVSRQGRASSPLTVTQL*QAAPAS
Trigger: GGAGGCAGGTGCTGCCTGGCAGAGCTGTGTTACCGT...GAGGGGACTGGAAGCCCTTCCCTGCCTTGAAACATGAAAGCTGATTTTCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp CAGTTCACGCGGTCATGCCGCGGAATGTCCACAACACAGACATGGAACAGAACCTGGGACAAACAAAGCTaGCCAGGACCTAGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: QFTRSCRGMSTTQTWNRTWDKQS*PGPSAG
Trigger: GCCAGCACTAGGTCCTGGGCAGCTTTGTTTGTCCCA...GGTTCTGTTCCATGTCTGTGTTGTGGACATTCCGCGGCATGACCGCGTGAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp GCTCAGAAAATCAGCTTTCATGTTTCAAGGCAGGGAAGGGCTTCCAGTCCCCTCCGCTCCTACGCCTCCTaGAGGTCGGAAGCAGTCAGT +
Preference number: 4 (lower is better)
Translates to: AQKISFHVSRQGRASSPLRSYAS*RSEAVS
Trigger: ACTGACTGCTTCCGACCTGCAGGAGGCGTAGGAGCG...GAGGGGACTGGAAGCCCTTCCCTGCCTTGAAACATGAAAGCTGATTTTCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR CCA 90 bp GCCTCTCTTCTGGCAGGTGAGATCAGAGTCCTACTGCAGCCTCAAGGCTGGGAGAGTGAGCGCTGTCTCTaGTCTGCCATGTTAGGCTAT +
Preference number: 4 (lower is better)
Translates to: ASLLAGEIRVLLQPQGWESERCL*SAMLGY
Trigger: ATAGCCTAACATGGCAGACCAGAGACAGCGCTCACT...CTCCCAGCCTTGAGGCTGCAGTAGGACTCTGATCTCACCTGCCAGAAGAGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR CCA 90 bp CTTCCCATCTCTGTGACTACAGTTCATGATTCTAAGGTTGGCGTGGCCAGGCGCATGCTACGCACTTCGTaGGTCAAGGGTCGACGCTGG +
Preference number: 4 (lower is better)
Translates to: LPISVTTVHDSKVGVARRMLRTS*VKGRRW
Trigger: CCAGCGTCGACCCTTGACCCACGAAGTGCGTAGCAT...GCGCCTGGCCACGCCAACCTTAGAATCATGAACTGTAGTCACAGAGATGGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR CCA 90 bp GCTCAGAAAATCAGCTTTCATGTTTCAAGGCAGGGAAGGGCTTCCAGTCCCCTCGCAGTCACCCCTCACTaGACCAACCTGACCGACAGC +
Preference number: 4 (lower is better)
Translates to: AQKISFHVSRQGRASSPLAVTPH*TNLTDS
Trigger: GCTGTCGGTCAGGTTGGTCCAGTGAGGGGTGACTGC...GAGGGGACTGGAAGCCCTTCCCTGCCTTGAAACATGAAAGCTGATTTTCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR CCA 90 bp CTTCCCATCTCTGTGACTACAGTTCATGATTCTAAGGTTGGCGTGGCCAGGCGCTTCAGGAGGCTCATCTaGTTGGTCCGAGCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: LPISVTTVHDSKVGVARRFRRLI*LVRARA
Trigger: GGCTCTGGCTCGGACCAACCAGATGAGCCTCCTGAA...GCGCCTGGCCACGCCAACCTTAGAATCATGAACTGTAGTCACAGAGATGGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR CCA 90 bp GCTCAGAAAATCAGCTTTCATGTTTCAAGGCAGGGAAGGGCTTCCAGTCCCCTCCTGGCAGCCGGCTCATaGTCCACATGCGGATCTGCA +
Preference number: 4 (lower is better)
Translates to: AQKISFHVSRQGRASSPLLAAGS*STCGSA
Trigger: TGCAGATCCGCATGTGGACCATGAGCCGGCTGCCAG...GAGGGGACTGGAAGCCCTTCCCTGCCTTGAAACATGAAAGCTGATTTTCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR CCA 90 bp CTCCGAGAACCAGAACGGCAGCGTCCACACGACGAGACGACCAGGCGAGAAACACACAGCTCTGAATACTaGGAAAGGGTGAGATCAGTC +
Preference number: 4 (lower is better)
Translates to: LREPERQRPHDETTRRETHSSEY*ERVRSV
Trigger: GACTGATCTCACCCTTTCCCAGTATTCAGAGCTGTG...TGTTTCTCGCCTGGTCGTCTCGTCGTGTGGACGCTGCCGTTCTGGTTCTCGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR TCA 90 bp CCGCGGAATGTCCACAACACAGACATGGAACAGAACCCCATACATGCTATTAAAAGGGTGGACAAGCGCTaGACTCTGCCCGCAGCACCC +
Preference number: 4 (lower is better)
Translates to: PRNVHNTDMEQNPIHAIKRVDKR*TLPAAP
Trigger: GGGTGCTGCGGGCAGAGTTCAGCGCTTGTCCACCCT...TTTAATAGCATGTATGGGGTTCTGTTCCATGTCTGTGTTGTGGACATTCCGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR TCA 90 bp GGGAAAGCCTCCTGCAGGTCCCTGCCCGACTCCCAAGAAACCAGAGGCCATTTCAATACTGGGAAAGGGTaGGATCAGTCATTTCGTGTC +
Preference number: 4 (lower is better)
Translates to: GKASCRSLPDSQETRGHFNTGKG*DQSFRV
Trigger: GACACGAAATGACTGATCTCACCCTTTCCCAGTATT...GAAATGGCCTCTGGTTTCTTGGGAGTCGGGCAGGGACCTGCAGGAGGCTTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR TCA 90 bp CAGTTCACGCGGTCATGCCGCGGAATGTCCACAACACAGACATGGAACAGAACCCACACTCACAGCATGTaGCGACGCAAACTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: QFTRSCRGMSTTQTWNRTHTHSM*RRKLLL
Trigger: CAGCAACAGTTTGCGTCGTCACATGCTGTGAGTGTG...GGTTCTGTTCCATGTCTGTGTTGTGGACATTCCGCGGCATGACCGCGTGAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp CTCCGAGAACCAGAACGGCAGCGTCCACACGACGAGACGACCAGGCGAGAAACACACTGCTTTAAATACTaGATGCTACGCACTTCGTGG +
Preference number: 4 (lower is better)
Translates to: LREPERQRPHDETTRRETHCFKY*MLRTSW
Trigger: CCACGAAGTGCGTAGCATGCAGTATTTAAAGCAGTG...TGTTTCTCGCCTGGTCGTCTCGTCGTGTGGACGCTGCCGTTCTGGTTCTCGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp GCCTCTCTTCTGGCAGGTGAGATCAGAGTCCTACTGCAGCCTCAAGGCTGGGAGAGGTTTTACAGATTCTaGAGGGGACTGGGTTCCACA +
Preference number: 4 (lower is better)
Translates to: ASLLAGEIRVLLQPQGWERFYRF*RGLGST
Trigger: TGTGGAACCCAGTCCCCTGCAGAATCTGTAAAACCT...CTCCCAGCCTTGAGGCTGCAGTAGGACTCTGATCTCACCTGCCAGAAGAGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp GCTCAGAAAATCAGCTTTCATGTTTCAAGGCAGGGAAGGGCTTCCAGTCCCCTCGCCCATGGCCACACTTaGTCACAGCATTGTCTGCGG +
Preference number: 4 (lower is better)
Translates to: AQKISFHVSRQGRASSPLAHGHT*SQHCLR
Trigger: CCGCAGACAATGCTGTGAGCAAGTGTGGCCATGGGC...GAGGGGACTGGAAGCCCTTCCCTGCCTTGAAACATGAAAGCTGATTTTCTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp GCCTCTCTTCTGGCAGGTGAGATCAGAGTCCTACTGCAGCCTCAAGGCTGGGAGCTGGGCACGTGTGCATaGCAGTTCCTTTTTCTAGTA +
Preference number: 4 (lower is better)
Translates to: ASLLAGEIRVLLQPQGWELGTCA*QFLFLV
Trigger: TACTAGAAAAAGGAACTGGCATGCACACGTGCCCAG...CTCCCAGCCTTGAGGCTGCAGTAGGACTCTGATCTCACCTGCCAGAAGAGAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp CTTCCCATCTCTGTGACTACAGTTCATGATTCTAAGGTTGGCGTGGCCAGGCGCAGACGAAGCTTTTCCTaGTGGGCACGTGTGCATGCC +
Preference number: 4 (lower is better)
Translates to: LPISVTTVHDSKVGVARRRRSFS*WARVHA
Trigger: GGCATGCACACGTGCCCAGCAGGAAAAGCTTCGTCT...GCGCCTGGCCACGCCAACCTTAGAATCATGAACTGTAGTCACAGAGATGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR CCA 90 bp CCGCGGAATGTCCACAACACAGACATGGAACAGAACCCCATACATGCTATTAAAGTCAAGGGTCGACGCTaGGTGGGCGTGGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: PRNVHNTDMEQNPIHAIKVKGRR*VGVEAG
Trigger: TCCTGCCTCCACGCCCACCCAGCGTCGACCCTTGAC...TTTAATAGCATGTATGGGGTTCTGTTCCATGTCTGTGTTGTGGACATTCCGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR CCA 90 bp ATACTGCATGCTACGCACTTCGTGGGTCAAGGGTCGACGCTGGGTGGGCGTGGATCCACAACACAGACATaGAACAGAACCCCATACATG +
Preference number: 4 (lower is better)
Translates to: ILHATHFVGQGSTLGGRGSTTQT*NRTPYM
Trigger: CATGTATGGGGTTCTGTTCCATGTCTGTGTTGTGGA...TCCACGCCCACCCAGCGTCGACCCTTGACCCACGAAGTGCGTAGCATGCAGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR CCA 90 bp GCCTCTCTTCTGGCAGGTGAGATCAGAGTCCTACTGCAGCCTCAAGGCTGGGAGCACAGCTCTGAATACTaGGAAAGGGTGAGATCAGTC +
Preference number: 4 (lower is better)
Translates to: ASLLAGEIRVLLQPQGWEHSSEY*ERVRSV
Trigger: GACTGATCTCACCCTTTCCCAGTATTCAGAGCTGTG...CTCCCAGCCTTGAGGCTGCAGTAGGACTCTGATCTCACCTGCCAGAAGAGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR CCA 90 bp CAGGTGAGATCAGAGTCCTACTGCAGCCTCAAGGCTGGGAGCACAGAGTGTGGAGACAAAACCAGTGCATaGACAAGCAGCTTCCATGCG +
Preference number: 4 (lower is better)
Translates to: QVRSESYCSLKAGSTECGDKTSA*TSSFHA
Trigger: CGCATGGAAGCTGCTTGTCCATGCACTGGTTTTGTC...TCCACACTCTGTGCTCCCAGCCTTGAGGCTGCAGTAGGACTCTGATCTCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR TCA 90 bp ATCTGCTGCTCAGAAAATCAGCTTTCATGTTTCAAGGCAGGGAAGGGCTTCCAGTCCCGCAGCAGCAGTTaGAGCAGCAGCACAGACAGC +
Preference number: 4 (lower is better)
Translates to: ICCSENQLSCFKAGKGFQSRSSS*SSSTDS
Trigger: GCTGTCTGTGCTGCTGCTTCAACTGCTGCTGCGGGA...CTGGAAGCCCTTCCCTGCCTTGAAACATGAAAGCTGATTTTCTGAGCAGCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR TCA 90 bp AAAACAGAAGACCGTAGCTACACTGCTTTAAATACTGCATGCTACGCACTTCGTCCTGACCGACAGCCCTaGGGCAGCTCCACCGTGCAG +
Preference number: 4 (lower is better)
Translates to: KTEDRSYTALNTACYALRPDRQP*GSSTVQ
Trigger: CTGCACGGTGGAGCTGCCTCAGGGCTGTCGGTCAGG...ACGAAGTGCGTAGCATGCAGTATTTAAAGCAGTGTAGCTACGGTCTTCTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp CCGCGGAATGTCCACAACACAGACATGGAACAGAACCCCATACATGCTATTAAAGGTCTCGGTGGCGGATaGCGGCTGTATGACGATCGG +
Preference number: 4 (lower is better)
Translates to: PRNVHNTDMEQNPIHAIKGLGGG*RLYDDR
Trigger: CCGATCGTCATACAGCCGGCATCCGCCACCGAGACC...TTTAATAGCATGTATGGGGTTCTGTTCCATGTCTGTGTTGTGGACATTCCGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp CAGTTCACGCGGTCATGCCGCGGAATGTCCACAACACAGACATGGAACAGAACCTCCCCAGTAGCTGGGTaGTCACACATGCACAATCTA +
Preference number: 4 (lower is better)
Translates to: QFTRSCRGMSTTQTWNRTSPVAG*SHMHNL
Trigger: TAGATTGTGCATGTGTGAGCACCCAGCTACTGGGGA...GGTTCTGTTCCATGTCTGTGTTGTGGACATTCCGCGGCATGACCGCGTGAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp AAAACAGAAGACCGTAGCTACACTGCTTTAAATACTGCATGCTACGCACTTCGTCCCCCTGCTCCCCTATaGAGGGCGCCACCCACAAGG +
Preference number: 4 (lower is better)
Translates to: KTEDRSYTALNTACYALRPPAPL*RAPPTR
Trigger: CCTTGTGGGTGGCGCCCTGCATAGGGGAGCAGGGGG...ACGAAGTGCGTAGCATGCAGTATTTAAAGCAGTGTAGCTACGGTCTTCTGTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp ATCTGCTGCTCAGAAAATCAGCTTTCATGTTTCAAGGCAGGGAAGGGCTTCCAGCTCTACAGGGACCTCTaGAACTCTGCAGCGGCCACC +
Preference number: 4 (lower is better)
Translates to: ICCSENQLSCFKAGKGFQLYRDL*NSAAAT
Trigger: GGTGGCCGCTGCAGAGTTGCAGAGGTCCCTGTAGAG...CTGGAAGCCCTTCCCTGCCTTGAAACATGAAAGCTGATTTTCTGAGCAGCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp CAGGTGAGATCAGAGTCCTACTGCAGCCTCAAGGCTGGGAGCACAGAGTGTGGAAGGTTTTACAGATTCTaGAGGGGACTGGGTTCCACA +
Preference number: 4 (lower is better)
Translates to: QVRSESYCSLKAGSTECGRFYRF*RGLGST
Trigger: TGTGGAACCCAGTCCCCTGCAGAATCTGTAAAACCT...TCCACACTCTGTGCTCCCAGCCTTGAGGCTGCAGTAGGACTCTGATCTCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp CAGGTGAGATCAGAGTCCTACTGCAGCCTCAAGGCTGGGAGCACAGAGTGTGGACTGGGCACGTGTGCATaGCAGTTCCTTTTTCTAGTA +
Preference number: 4 (lower is better)
Translates to: QVRSESYCSLKAGSTECGLGTCA*QFLFLV
Trigger: TACTAGAAAAAGGAACTGGCATGCACACGTGCCCAG...TCCACACTCTGTGCTCCCAGCCTTGAGGCTGCAGTAGGACTCTGATCTCACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp CCGCGGAATGTCCACAACACAGACATGGAACAGAACCCCATACATGCTATTAAAGACACAGGCCAGTCCTaGGCCACAGGGGTTCACAGC +
Preference number: 4 (lower is better)
Translates to: PRNVHNTDMEQNPIHAIKDTGQS*ATGVHS
Trigger: GCTGTGAACCCCTGTGGCGCAGGACTGGCCTGTGTC...TTTAATAGCATGTATGGGGTTCTGTTCCATGTCTGTGTTGTGGACATTCCGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp CTCCGAGAACCAGAACGGCAGCGTCCACACGACGAGACGACCAGGCGAGAAACAACTGACCGTATCTGCTaGTCAGAAAATCAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: LREPERQRPHDETTRRETTDRIC*SENQLS
Trigger: TGAAAGCTGATTTTCTGAGCAGCAGATACGGTCAGT...TGTTTCTCGCCTGGTCGTCTCGTCGTGTGGACGCTGCCGTTCTGGTTCTCGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp CCGCGGAATGTCCACAACACAGACATGGAACAGAACCCCATACATGCTATTAAAGCGGCACAGTGTCAGTaGCCTCCCCTCTCGTCAGAC +
Preference number: 4 (lower is better)
Translates to: PRNVHNTDMEQNPIHAIKAAQCQ*PPLSSD
Trigger: GTCTGACGAGAGGGGAGGGCACTGACACTGTGCCGC...TTTAATAGCATGTATGGGGTTCTGTTCCATGTCTGTGTTGTGGACATTCCGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470551.1
CDS-3UTR CCA 90 bp CCGCGGAATGTCCACAACACAGACATGGAACAGAACCCCATACATGCTATTAAAGAGTCGGCTGTGAGCTaGGTGGTCTCGGTGGCGGAT +
Preference number: 4 (lower is better)
Translates to: PRNVHNTDMEQNPIHAIKESAVS*VVSVAD
Trigger: ATCCGCCACCGAGACCACCCAGCTCACAGCCGACTC...TTTAATAGCATGTATGGGGTTCTGTTCCATGTCTGTGTTGTGGACATTCCGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR CCA 90 bp ATCTGCTGCTCAGAAAATCAGCTTTCATGTTTCAAGGCAGGGAAGGGCTTCCAGGCAGTCACCCCTCACTaGACCAACCTGACCGACAGC +
Preference number: 4 (lower is better)
Translates to: ICCSENQLSCFKAGKGFQAVTPH*TNLTDS
Trigger: GCTGTCGGTCAGGTTGGTCCAGTGAGGGGTGACTGC...CTGGAAGCCCTTCCCTGCCTTGAAACATGAAAGCTGATTTTCTGAGCAGCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR TCA 90 bp GCTCAGAAAATCAGCTTTCATGTTTCAAGGCAGGGAAGGGCTTCCAGTCCCCTCGCACAATCTACTCTCTaGCTGTGGCTCATTGGGCTG +
Preference number: 4 (lower is better)
Translates to: AQKISFHVSRQGRASSPLAQSTL*LWLIGL
Trigger: CAGCCCAATGAGCCACAGTCAGAGAGTAGATTGTGC...GAGGGGACTGGAAGCCCTTCCCTGCCTTGAAACATGAAAGCTGATTTTCTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp ATCTGCTGCTCAGAAAATCAGCTTTCATGTTTCAAGGCAGGGAAGGGCTTCCAGGGACCTCTGCAACTCTaGAGCGGCCACCATGGACAT +
Preference number: 4 (lower is better)
Translates to: ICCSENQLSCFKAGKGFQGPLQL*SGHHGH
Trigger: ATGTCCATGGTGGCCGCTGCAGAGTTGCAGAGGTCC...CTGGAAGCCCTTCCCTGCCTTGAAACATGAAAGCTGATTTTCTGAGCAGCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp AAAACAGAAGACCGTAGCTACACTGCTTTAAATACTGCATGCTACGCACTTCGTGCTGGTGCCCTTCCTTaGAGCACAAGCCTCGCCCGG +
Preference number: 4 (lower is better)
Translates to: KTEDRSYTALNTACYALRAGALP*STSLAR
Trigger: CCGGGCGAGGCTTGTGCTGCAAGGAAGGGCACCAGC...ACGAAGTGCGTAGCATGCAGTATTTAAAGCAGTGTAGCTACGGTCTTCTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp AAAACAGAAGACCGTAGCTACACTGCTTTAAATACTGCATGCTACGCACTTCGTGCTGGGAAAGCCTCCTaGAGGTCCCTGCCCGACTCC +
Preference number: 4 (lower is better)
Translates to: KTEDRSYTALNTACYALRAGKAS*RSLPDS
Trigger: GGAGTCGGGCAGGGACCTGCAGGAGGCTTTCCCAGC...ACGAAGTGCGTAGCATGCAGTATTTAAAGCAGTGTAGCTACGGTCTTCTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp CCGCGGAATGTCCACAACACAGACATGGAACAGAACCCCATACATGCTATTAAAATGGGCACCCCACCCTaGAGAGCAGAGGCCAATGCT +
Preference number: 4 (lower is better)
Translates to: PRNVHNTDMEQNPIHAIKMGTPP*RAEANA
Trigger: AGCATTGGCCTCTGCTCTGCAGGGTGGGGTGCCCAT...TTTAATAGCATGTATGGGGTTCTGTTCCATGTCTGTGTTGTGGACATTCCGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR TCA 90 bp CCGCGGAATGTCCACAACACAGACATGGAACAGAACCCCATACATGCTATTAAATTTTTGTGGCGTCCGTaGGGATGGCGTGCGCGTTGT +
Preference number: 4 (lower is better)
Translates to: PRNVHNTDMEQNPIHAIKFLWRP*GWRARC
Trigger: ACAACGCGCACGCCATCCTCACGGACGCCACAAAAA...TTTAATAGCATGTATGGGGTTCTGTTCCATGTCTGTGTTGTGGACATTCCGCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR TCA 90 bp AAAACAGAAGACCGTAGCTACACTGCTTTAAATACTGCATGCTACGCACTTCGTCTCACTGGACCAACCTaGCCGACAGCCCTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: KTEDRSYTALNTACYALRLTGPT*PTALRQ
Trigger: CTGCCTCAGGGCTGTCGGTCAGGTTGGTCCAGTGAG...ACGAAGTGCGTAGCATGCAGTATTTAAAGCAGTGTAGCTACGGTCTTCTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR TCA 90 bp GCCTCTCTTCTGGCAGGTGAGATCAGAGTCCTACTGCAGCCTCAAGGCTGGGAGGACACTCCTGCTGCGTaGTATATACATATACACATA +
Preference number: 4 (lower is better)
Translates to: ASLLAGEIRVLLQPQGWEDTPAA*YIHIHI
Trigger: TATGTGTATATGTATATATCACGCAGCAGGAGTGTC...CTCCCAGCCTTGAGGCTGCAGTAGGACTCTGATCTCACCTGCCAGAAGAGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp CAGTTCACGCGGTCATGCCGCGGAATGTCCACAACACAGACATGGAACAGAACCGCTTTAAATACTGCATaGTACGCACTTCGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: QFTRSCRGMSTTQTWNRTALNTA*YALRGS
Trigger: TGACCCACGAAGTGCGTAGCATGCAGTATTTAAAGC...GGTTCTGTTCCATGTCTGTGTTGTGGACATTCCGCGGCATGACCGCGTGAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp CAGTTCACGCGGTCATGCCGCGGAATGTCCACAACACAGACATGGAACAGAACCCACTGCTTTAAATACTaGATGCTACGCACTTCGTGG +
Preference number: 4 (lower is better)
Translates to: QFTRSCRGMSTTQTWNRTHCFKY*MLRTSW
Trigger: CCACGAAGTGCGTAGCATGCAGTATTTAAAGCAGTG...GGTTCTGTTCCATGTCTGTGTTGTGGACATTCCGCGGCATGACCGCGTGAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp GCTCAGAAAATCAGCTTTCATGTTTCAAGGCAGGGAAGGGCTTCCAGTCCCCTCCCTTCCGCAGGGAGCTaGATGGTTCTACAAAATGGT +
Preference number: 4 (lower is better)
Translates to: AQKISFHVSRQGRASSPLPSAGS*MVLQNG
Trigger: ACCATTTTGTAGAACCATGCAGCTCCCTGCGGAAGG...GAGGGGACTGGAAGCCCTTCCCTGCCTTGAAACATGAAAGCTGATTTTCTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp AAAACAGAAGACCGTAGCTACACTGCTTTAAATACTGCATGCTACGCACTTCGTGGAAGCAGTCAGTGCTaGCCGGACCCCCTCGTGAAC +
Preference number: 4 (lower is better)
Translates to: KTEDRSYTALNTACYALRGSSQC*PDPLVN
Trigger: GTTCACGAGGGGGTCCGGGCAGCACTGACTGCTTCC...ACGAAGTGCGTAGCATGCAGTATTTAAAGCAGTGTAGCTACGGTCTTCTGTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp GCTCAGAAAATCAGCTTTCATGTTTCAAGGCAGGGAAGGGCTTCCAGTCCCCTCCCACTGGGTGCTGGCTaGACTAACAACATAGAGAAC +
Preference number: 4 (lower is better)
Translates to: AQKISFHVSRQGRASSPLPLGAG*TNNIEN
Trigger: GTTCTCTATGTTGTTAGTGCAGCCAGCACCCAGTGG...GAGGGGACTGGAAGCCCTTCCCTGCCTTGAAACATGAAAGCTGATTTTCTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp CCGCGGAATGTCCACAACACAGACATGGAACAGAACCCCATACATGCTATTAAACTCAACAGTCCCAGCTaGCACCACAAACACTCGCGG +
Preference number: 4 (lower is better)
Translates to: PRNVHNTDMEQNPIHAIKLNSPS*HHKHSR
Trigger: CCGCGAGTGTTTGTGGTGGCAGCTGGGACTGTTGAG...TTTAATAGCATGTATGGGGTTCTGTTCCATGTCTGTGTTGTGGACATTCCGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470551.1
CDS-3UTR GCA 90 bp GCTCAGAAAATCAGCTTTCATGTTTCAAGGCAGGGAAGGGCTTCCAGTCCCCTCCTGGGTGCTCACACATaGACAATCTACTCTCTGACT +
Preference number: 4 (lower is better)
Translates to: AQKISFHVSRQGRASSPLLGAHT*TIYSLT
Trigger: AGTCAGAGAGTAGATTGTGCATGTGTGAGCACCCAG...GAGGGGACTGGAAGCCCTTCCCTGCCTTGAAACATGAAAGCTGATTTTCTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR CCA 90 bp ATCTGCTGCTCAGAAAATCAGCTTTCATGTTTCAAGGCAGGGAAGGGCTTCCAGTCCAACCCAAGGACGTaGTACAATGACTCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: ICCSENQLSCFKAGKGFQSNPRT*YNDSPE
Trigger: CTCTGGGGAGTCATTGTACCACGTCCTTGGGTTGGA...CTGGAAGCCCTTCCCTGCCTTGAAACATGAAAGCTGATTTTCTGAGCAGCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR CCA 90 bp GCTCAGAAAATCAGCTTTCATGTTTCAAGGCAGGGAAGGGCTTCCAGTCCCCTCTCCACAACACAGACATaGAACAGAACCCCATACATG +
Preference number: 4 (lower is better)
Translates to: AQKISFHVSRQGRASSPLSTTQT*NRTPYM
Trigger: CATGTATGGGGTTCTGTTCCATGTCTGTGTTGTGGA...GAGGGGACTGGAAGCCCTTCCCTGCCTTGAAACATGAAAGCTGATTTTCTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp AAAACAGAAGACCGTAGCTACACTGCTTTAAATACTGCATGCTACGCACTTCGTCAGTTCACGCGGTCATaGCGCGGAATGTCCACAACA +
Preference number: 4 (lower is better)
Translates to: KTEDRSYTALNTACYALRQFTRS*RGMSTT
Trigger: TGTTGTGGACATTCCGCGGCATGACCGCGTGAACTG...ACGAAGTGCGTAGCATGCAGTATTTAAAGCAGTGTAGCTACGGTCTTCTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR TCA 90 bp AAAACAGAAGACCGTAGCTACACTGCTTTAAATACTGCATGCTACGCACTTCGTCTCTCTTCTGGCAGGTaGGATCAGAGTCCTACTGCA +
Preference number: 4 (lower is better)
Translates to: KTEDRSYTALNTACYALRLSSGR*DQSPTA
Trigger: TGCAGTAGGACTCTGATCTCACCTGCCAGAAGAGAG...ACGAAGTGCGTAGCATGCAGTATTTAAAGCAGTGTAGCTACGGTCTTCTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp AAAACAGAAGACCGTAGCTACACTGCTTTAAATACTGCATGCTACGCACTTCGTTCCCCAGTAGCTGGGTaGTCACACATGCACAATCTA +
Preference number: 4 (lower is better)
Translates to: KTEDRSYTALNTACYALRSPVAG*SHMHNL
Trigger: TAGATTGTGCATGTGTGAGCACCCAGCTACTGGGGA...ACGAAGTGCGTAGCATGCAGTATTTAAAGCAGTGTAGCTACGGTCTTCTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR GCA 90 bp AAAACAGAAGACCGTAGCTACACTGCTTTAAATACTGCATGCTACGCACTTCGTCCACTGGGTGCTGGCTaGACTAACAACATAGAGAAC +
Preference number: 4 (lower is better)
Translates to: KTEDRSYTALNTACYALRPLGAG*TNNIEN
Trigger: GTTCTCTATGTTGTTAGTGCAGCCAGCACCCAGTGG...ACGAAGTGCGTAGCATGCAGTATTTAAAGCAGTGTAGCTACGGTCTTCTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR TCA 90 bp CCGCGGAATGTCCACAACACAGACATGGAACAGAACCCCATACATGCTATTAAAGACACTCCTGCTGCGTaGTATATACATATACACATA +
Preference number: 4 (lower is better)
Translates to: PRNVHNTDMEQNPIHAIKDTPAA*YIHIHI
Trigger: TATGTGTATATGTATATATCACGCAGCAGGAGTGTC...TTTAATAGCATGTATGGGGTTCTGTTCCATGTCTGTGTTGTGGACATTCCGCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS GCA 90 bp TCTGTGGCCTCTCAGGGTCCACGTTCACACCTCAACAGTCCCAGCTaGCACCACAAACACTCGCGGCACAGTGTCAGTGCCCTCCCCTCT +
Preference number: 5 (lower is better)
Translates to: SVASQGPRSHLNSPS*HHKHSRHSVSALPS
Trigger: AGAGGGGAGGGCACTGACACTGTGCCGCGAGTGTTTGTGGTGGCAGCTGGGACTGTTGAGGTGTGAACGTGGACCCTGAGAGGCCACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470551.1
CDS-3UTR CAA 90 bp GCCTCTCTTCTGGCAGGTGAGATCAGAGTCCTACTGCAGCCTCAAGGCTGGGAGTTCATGATTCTAAGGTaGGCGTGGCCAGGCGCCGGC +
Preference number: 5 (lower is better)
Translates to: ASLLAGEIRVLLQPQGWEFMILR*AWPGAG
Trigger: GCCGGCGCCTGGCCACGCCAACCTTAGAATCATGAA...CTCCCAGCCTTGAGGCTGCAGTAGGACTCTGATCTCACCTGCCAGAAGAGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR CAA 90 bp CTCCGAGAACCAGAACGGCAGCGTCCACACGACGAGACGACCAGGCGAGAAACACATCTCAGGCTGAACTaGCTGCTGCACGAAGCGGCA +
Preference number: 5 (lower is better)
Translates to: LREPERQRPHDETTRRETHLRLN*LLHEAA
Trigger: TGCCGCTTCGTGCAGCAGCAAGTTCAGCCTGAGATG...TGTTTCTCGCCTGGTCGTCTCGTCGTGTGGACGCTGCCGTTCTGGTTCTCGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR CAA 90 bp CAGGTGAGATCAGAGTCCTACTGCAGCCTCAAGGCTGGGAGCACAGAGTGTGGAAAGACAAACAGGGCCTaGGCCCACCAGCTGGACAGC +
Preference number: 5 (lower is better)
Translates to: QVRSESYCSLKAGSTECGKTNRA*AHQLDS
Trigger: GCTGTCCAGCTGGTGGGCCAAGGCCCTGTTTGTCTT...TCCACACTCTGTGCTCCCAGCCTTGAGGCTGCAGTAGGACTCTGATCTCACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR CAA 90 bp CTTCCCATCTCTGTGACTACAGTTCATGATTCTAAGGTTGGCGTGGCCAGGCGCAAGACAAACAGGGCCTaGGCCCACCAGCTGGACAGC +
Preference number: 5 (lower is better)
Translates to: LPISVTTVHDSKVGVARRKTNRA*AHQLDS
Trigger: GCTGTCCAGCTGGTGGGCCAAGGCCCTGTTTGTCTT...GCGCCTGGCCACGCCAACCTTAGAATCATGAACTGTAGTCACAGAGATGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR CAA 90 bp CAGTTCACGCGGTCATGCCGCGGAATGTCCACAACACAGACATGGAACAGAACCCATCTCAGGCTGAACTaGCTGCTGCACGAAGCGGCA +
Preference number: 5 (lower is better)
Translates to: QFTRSCRGMSTTQTWNRTHLRLN*LLHEAA
Trigger: TGCCGCTTCGTGCAGCAGCAAGTTCAGCCTGAGATG...GGTTCTGTTCCATGTCTGTGTTGTGGACATTCCGCGGCATGACCGCGTGAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR CAA 90 bp CTTCCCATCTCTGTGACTACAGTTCATGATTCTAAGGTTGGCGTGGCCAGGCGCTTCCCGCAGCAGCAGTaGAAGCAGCAGCACAGACAG +
Preference number: 5 (lower is better)
Translates to: LPISVTTVHDSKVGVARRFPQQQ*KQQHRQ
Trigger: CTGTCTGTGCTGCTGCTTCAACTGCTGCTGCGGGAA...GCGCCTGGCCACGCCAACCTTAGAATCATGAACTGTAGTCACAGAGATGGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS-3UTR CAA 90 bp AAAACAGAAGACCGTAGCTACACTGCTTTAAATACTGCATGCTACGCACTTCGTTTCCCGCAGCAGCAGTaGAAGCAGCAGCACAGACAG +
Preference number: 5 (lower is better)
Translates to: KTEDRSYTALNTACYALRFPQQQ*KQQHRQ
Trigger: CTGTCTGTGCTGCTGCTTCAACTGCTGCTGCGGGAA...ACGAAGTGCGTAGCATGCAGTATTTAAAGCAGTGTAGCTACGGTCTTCTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS TCA 72 bp CAGGCGCCTTGGGCTTACACTTCCCGCAGCAGCAGTTaGAGCAGCAGCACAGACAGCAGCAGCAGTAGCAGC +
Preference number: 6 (lower is better)
Translates to: QAPWAYTSRSSS*SSSTDSSSSSS
Trigger: GCTGCTACTGCTGCTGCTGTCTGTGCTGCTGCTTCAACTGCTGCTGCGGGAAGTGTAAGCCCAAGGCGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360864.9
ENST00000470551.1
CDS GCA 72 bp TCTCAGGGTCCACGTTCACACCTCAACAGTCCCAGCTaGCACCACAAACACTCGCGGCACAGTGTCAGTGCC +
Preference number: 6 (lower is better)
Translates to: SQGPRSHLNSPS*HHKHSRHSVSA
Trigger: GGCACTGACACTGTGCCGCGAGTGTTTGTGGTGGCAGCTGGGACTGTTGAGGTGTGAACGTGGACCCTGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470551.1