RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DNAJC4 (Homo sapiens)

Ensembl gene IDs: ENSG00000110011

Ensembl transcript IDs: ENST00000321460.5, ENST00000321685.7, ENST00000355040.8, ENST00000535246.1, ENST00000536006.5, ENST00000537109.1, ENST00000538961.1, ENST00000540945.1, ENST00000542376.5, ENST00000543685.1, ENST00000543791.5, ENST00000628077.2

Found 262 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCGGATGGTGGCGGCTGCCGCTGCCCTAGCCGTTGTCGCTCCTGCTaGAGGATGCCTCTGTTGGCCCTGGCCCGTGCCCGGGCTTCGTTG +
Preference number: 1 (lower is better)
Translates to: SDGGGCRCPSRCRSC*RMPLLALARARASL
Trigger: CAACGAAGCCCGGGCACGGGCCAGGGCCAACAGAGGCATCCTTCAGCAGGAGCGACAACGGCTAGGGCAGCGGCAGCCGCCACCATCCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628077.2
3UTR TCA 90 bp TCGGATGGTGGCGGCTGCCGCTGCCCTAGCCGTTGTCGCTCCTGCTaGAGGATGCCTCTGTTGGCCCTGGAGGAGAGGGCACCTGGGTGG +
Preference number: 1 (lower is better)
Translates to: SDGGGCRCPSRCRSC*RMPLLALEERAPGW
Trigger: CCACCCAGGTGCCCTCTCCTCCAGGGCCAACAGAGGCATCCTTCAGCAGGAGCGACAACGGCTAGGGCAGCGGCAGCCGCCACCATCCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355040.8
3UTR GCA 90 bp GTGGCGGCTGCCGCTGCCCTAGCCGTTGTCGCTCCTGCTGAAGGATaGCTCTGTTGGCCCTGGCCCGTGCCCGGGCTTCGTTGTAGAAGG +
Preference number: 1 (lower is better)
Translates to: VAAAAALAVVAPAEG*LCWPWPVPGLRCRR
Trigger: CCTTCTACAACGAAGCCCGGGCACGGGCCAGGGCCAACAGAGGCATCCTTCAGCAGGAGCGACAACGGCTAGGGCAGCGGCAGCCGCCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628077.2
3UTR TCA 90 bp CTGAGCGGAGCTGGTCATCATAGCTGCGGCGGCTCTGCTCACGGCTaGGCACACGGTATGCCTCGCTCAGCTCCACAAAGCGGCTGTGCA +
Preference number: 1 (lower is better)
Translates to: LSGAGHHSCGGSAHG*AHGMPRSAPQSGCA
Trigger: TGCACAGCCGCTTTGTGGAGCTGAGCGAGGCATACCGTGTGCTCAGCCGTGAGCAGAGCCGCCGCAGCTATGATGACCAGCTCCGCTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536006.5
3UTR GCA 90 bp GTCATCATAGCTGCGGCGGCTCTGCTCACGGCTGAGCACACGGTATaGCTCGCTCAGCTCCACAAAGCGGCTGTGCAGGCTTGGGTTCCC +
Preference number: 1 (lower is better)
Translates to: VIIAAAALLTAEHTV*LAQLHKAAVQAWVP
Trigger: GGGAACCCAAGCCTGCACAGCCGCTTTGTGGAGCTGAGCGAGGCATACCGTGTGCTCAGCCGTGAGCAGAGCCGCCGCAGCTATGATGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536006.5
3UTR CCA 90 bp GCCCTAGCCGTTGTCGCTCCTGCTGAAGGATGCCTCTGTTGGCCCTaGAGGAGAGGGCACCTGGGTGGTTGGGATAGGGATCCCGAAGTG +
Preference number: 1 (lower is better)
Translates to: ALAVVAPAEGCLCWP*RRGHLGGWDRDPEV
Trigger: CACTTCGGGATCCCTATCCCAACCACCCAGGTGCCCTCTCCTCCAGGGCCAACAGAGGCATCCTTCAGCAGGAGCGACAACGGCTAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355040.8
3UTR CCA 90 bp GAGGGCACCTGGGTGGTTGGGATAGGGATCCCGAAGTGTGGTTCCTaGACAGGGAGCAGGGAGCAGAATAGAGCAGGGACAGACCTGGCC +
Preference number: 1 (lower is better)
Translates to: EGTWVVGIGIPKCGS*TGSREQNRAGTDLA
Trigger: GGCCAGGTCTGTCCCTGCTCTATTCTGCTCCCTGCTCCCTGTCCAGGAACCACACTTCGGGATCCCTATCCCAACCACCCAGGTGCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355040.8
3UTR CCA 90 bp CTCCTGCTGAAGGATGCCTCTGTTGGCCCTGGAGGAGAGGGCACCTaGGTGGTTGGGATAGGGATCCCGAAGTGTGGTTCCTGGACAGGG +
Preference number: 1 (lower is better)
Translates to: LLLKDASVGPGGEGT*VVGIGIPKCGSWTG
Trigger: CCCTGTCCAGGAACCACACTTCGGGATCCCTATCCCAACCACCCAGGTGCCCTCTCCTCCAGGGCCAACAGAGGCATCCTTCAGCAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355040.8
3UTR CCA 90 bp CACACGGTATGCCTCGCTCAGCTCCACAAAGCGGCTGTGCAGGCTTaGGTTCCCAGGGTCCCGGTCTGGGTGCAGCTCTTTGGACTTGGA +
Preference number: 1 (lower is better)
Translates to: HTVCLAQLHKAAVQA*VPRVPVWVQLFGLG
Trigger: TCCAAGTCCAAAGAGCTGCACCCAGACCGGGACCCTGGGAACCCAAGCCTGCACAGCCGCTTTGTGGAGCTGAGCGAGGCATACCGTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536006.5
3UTR GCA 90 bp CCGTTGTCGCTCCTGCTGAAGGATGCCTCTGTTGGCCCTGGCCCGTaGCCGGGCTTCGTTGTAGAAGGCTGTGATGATCCGATCCTTTTC +
Preference number: 1 (lower is better)
Translates to: PLSLLLKDASVGPGP*PGFVVEGCDDPILF
Trigger: GAAAAGGATCGGATCATCACAGCCTTCTACAACGAAGCCCGGGCACGGGCCAGGGCCAACAGAGGCATCCTTCAGCAGGAGCGACAACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628077.2
3UTR TCA 90 bp AGACTTGTCATGGACTGTGGTTCGTGGAGACTTTGGGGGACTACCTaGGCGGAGCTGGTCATCATAGCTGCGGCGGCTCTGCTCACGGCT +
Preference number: 1 (lower is better)
Translates to: RLVMDCGSWRLWGTT*AELVIIAAAALLTA
Trigger: AGCCGTGAGCAGAGCCGCCGCAGCTATGATGACCAGCTCCGCTCAGGTAGTCCCCCAAAGTCTCCACGAACCACAGTCCATGACAAGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536006.5
3UTR-3UTR CCA 90 bp TCTCGGGGCCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGCCCTAGCCGTTGAGCAGGGACAGACCTaGCCCGTGCCCGGGCTTCGT +
Preference number: 2 (lower is better)
Translates to: SRGLGLARMVAAAAALAVEQGQT*PVPGLR
Trigger: ACGAAGCCCGGGCACGGGCCAGGTCTGTCCCTGCTC...AACGGCTAGGGCAGCGGCAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355040.8
3UTR-3UTR CCA 90 bp ATCTCGGGGCCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGCCCTAGCCGTGAAGGATGCCTCTGTTaGCCCTGGCCCGTGCCCGGG +
Preference number: 2 (lower is better)
Translates to: ISGPWVGSDGGGCRCPSREGCLC*PWPVPG
Trigger: CCCGGGCACGGGCCAGGGCCAACAGAGGCATCCTTC...ACGGCTAGGGCAGCGGCAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAGAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628077.2
3UTR-3UTR CCA 90 bp GGACAGGGAGCAGGGAGCAGAATAGAGCAGGGACAGACCTGGCCCGTGCCCGGGCTCGGGGCCTTGGGTTaGCTCGGATGGTGGCGGCTG +
Preference number: 2 (lower is better)
Translates to: GQGAGSRIEQGQTWPVPGLGALG*LGWWRL
Trigger: CAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAG...CCCGGGCACGGGCCAGGTCTGTCCCTGCTCTATTCTGCTCCCTGCTCCCTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355040.8
3UTR-3UTR GCA 90 bp CCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGCCCTAGCCGTTGTCGCTCCGTTGGCCCTGGCCCGTaGCCGGGCTTCGTTGTAGAA +
Preference number: 2 (lower is better)
Translates to: PWVGSDGGGCRCPSRCRSVGPGP*PGFVVE
Trigger: TTCTACAACGAAGCCCGGGCACGGGCCAGGGCCAAC...GGAGCGACAACGGCTAGGGCAGCGGCAGCCGCCACCATCCGAGCCAACCCAAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628077.2
3UTR-3UTR GCA 90 bp TCTCGGGGCCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGCCCTAGCCGTTGCTCCTGCTGAAGGATaGCTCTGTTGGCCCTGGCCC +
Preference number: 2 (lower is better)
Translates to: SRGLGLARMVAAAAALAVAPAEG*LCWPWP
Trigger: GGGCCAGGGCCAACAGAGGCATCCTTCAGCAGGAGC...AACGGCTAGGGCAGCGGCAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628077.2
3UTR-3UTR CCA 90 bp ACGATCTCGGGGCCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGCCCTAGCACGATCTCGGGGCCTTaGGTTGGCTCGGATGGTGGC +
Preference number: 2 (lower is better)
Translates to: TISGPWVGSDGGGCRCPSTISGP*VGSDGG
Trigger: GCCACCATCCGAGCCAACCCAAGGCCCCGAGATCGT...GCTAGGGCAGCGGCAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAGATCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355040.8
ENST00000628077.2
3UTR-3UTR CCA 90 bp CTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGCCCTAGCCGTTGTCGCTCCTTGCCTCTGTTGGCCCTaGAGGAGAGGGCACCTGGGT +
Preference number: 2 (lower is better)
Translates to: LGLARMVAAAAALAVVAPCLCWP*RRGHLG
Trigger: ACCCAGGTGCCCTCTCCTCCAGGGCCAACAGAGGCA...AGGAGCGACAACGGCTAGGGCAGCGGCAGCCGCCACCATCCGAGCCAACCCAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355040.8
3UTR-3UTR CCA 90 bp AAGGAAGCAAAGCGGGAACGCACTGCAGGCCCCATCCAGGTGAGCCCCTCAGGGACGATCTCGGGGCCTTaGGTTGGCTCGGATGGTGGC +
Preference number: 2 (lower is better)
Translates to: KEAKRERTAGPIQVSPSGTISGP*VGSDGG
Trigger: GCCACCATCCGAGCCAACCCAAGGCCCCGAGATCGT...CCCTGAGGGGCTCACCTGGATGGGGCCTGCAGTGCGTTCCCGCTTTGCTTCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000628077.2
3UTR CAA 90 bp GCACACGGTATGCCTCGCTCAGCTCCACAAAGCGGCTGTGCAGGCTaGGGTTCCCAGGGTCCCGGTCTGGGTGCAGCTCTTTGGACTTGG +
Preference number: 2 (lower is better)
Translates to: AHGMPRSAPQSGCAG*GSQGPGLGAALWTW
Trigger: CCAAGTCCAAAGAGCTGCACCCAGACCGGGACCCTGGGAACCCAAGCCTGCACAGCCGCTTTGTGGAGCTGAGCGAGGCATACCGTGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536006.5
3UTR-3UTR GCA 90 bp AAGGAAGCAAAGCGGGAACGCACTGCAGGCCCCATCCAGGTGAGCCCCTCAGGGAAAGCGGGAACGCACTaGAGGCCCCATCCAGGTGAG +
Preference number: 2 (lower is better)
Translates to: KEAKRERTAGPIQVSPSGKAGTH*RPHPGE
Trigger: CTCACCTGGATGGGGCCTGCAGTGCGTTCCCGCTTT...CCCTGAGGGGCTCACCTGGATGGGGCCTGCAGTGCGTTCCCGCTTTGCTTCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000628077.2
3UTR-3UTR CCA 90 bp GCTCTGCTCACGGCTGAGCACACGGTATGCCTCGCTCAGCTCCACAAAGCGGCTCCCAGGGTCCCGGTCTaGGTGCAGCTCTTTGGACTT +
Preference number: 2 (lower is better)
Translates to: ALLTAEHTVCLAQLHKAAPRVPV*VQLFGL
Trigger: AAGTCCAAAGAGCTGCACCCAGACCGGGACCCTGGG...AGCCGCTTTGTGGAGCTGAGCGAGGCATACCGTGTGCTCAGCCGTGAGCAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536006.5
3UTR-3UTR GCA 90 bp CTGTGGTTCGTGGAGACTTTGGGGGACTACCTGAGCGGAGCTGGTCATCATAGCTCCACAAAGCGGCTGTaGAGGCTTGGGTTCCCAGGG +
Preference number: 2 (lower is better)
Translates to: LWFVETLGDYLSGAGHHSSTKRL*RLGFPG
Trigger: CCCTGGGAACCCAAGCCTGCACAGCCGCTTTGTGGA...GCTATGATGACCAGCTCCGCTCAGGTAGTCCCCCAAAGTCTCCACGAACCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536006.5
3UTR-3UTR CCA 90 bp TTGGAGAAGAAAGCTCGTTTAACTTCCTCAGTGCTGGCACCAGGATGCACCCCCAATAAGTACTGGGTCTaGACCTGGACTCAAACTTCC +
Preference number: 2 (lower is better)
Translates to: LEKKARLTSSVLAPGCTPNKYWV*TWTQTS
Trigger: GGAAGTTTGAGTCCAGGTCCAGACCCAGTACTTATT...GGGGGTGCATCCTGGTGCCAGCACTGAGGAAGTTAAACGAGCTTTCTTCTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536006.5
3UTR TCA 72 bp GGCGGCTGCCGCTGCCCTAGCCGTTGTCGCTCCTGCTaGAGGATGCCTCTGTTGGCCCTGGCCCGTGCCCGG +
Preference number: 3 (lower is better)
Translates to: GGCRCPSRCRSC*RMPLLALARAR
Trigger: CCGGGCACGGGCCAGGGCCAACAGAGGCATCCTTCAGCAGGAGCGACAACGGCTAGGGCAGCGGCAGCCGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628077.2
3UTR GCA 72 bp GCCGCTGCCCTAGCCGTTGTCGCTCCTGCTGAAGGATaGCTCTGTTGGCCCTGGCCCGTGCCCGGGCTTCGT +
Preference number: 3 (lower is better)
Translates to: AAALAVVAPAEG*LCWPWPVPGLR
Trigger: ACGAAGCCCGGGCACGGGCCAGGGCCAACAGAGGCATCCTTCAGCAGGAGCGACAACGGCTAGGGCAGCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628077.2
3UTR-3UTR CAA 90 bp CTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGCCCTAGCCGTTGTCGCTCCTCACGATCTCGGGGCCTaGGGTTGGCTCGGATGGTGG +
Preference number: 3 (lower is better)
Translates to: LGLARMVAAAAALAVVAPHDLGA*GWLGWW
Trigger: CCACCATCCGAGCCAACCCAAGGCCCCGAGATCGTG...AGGAGCGACAACGGCTAGGGCAGCGGCAGCCGCCACCATCCGAGCCAACCCAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355040.8
ENST00000628077.2
3UTR GCA 72 bp GCCGCTGCCCTAGCCGTTGTCGCTCCTGCTGAAGGATaGCTCTGTTGGCCCTGGAGGAGAGGGCACCTGGGT +
Preference number: 3 (lower is better)
Translates to: AAALAVVAPAEG*LCWPWRRGHLG
Trigger: ACCCAGGTGCCCTCTCCTCCAGGGCCAACAGAGGCATCCTTCAGCAGGAGCGACAACGGCTAGGGCAGCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355040.8
3UTR GCA 72 bp GCTGCGGCGGCTCTGCTCACGGCTGAGCACACGGTATaGCTCGCTCAGCTCCACAAAGCGGCTGTGCAGGCT +
Preference number: 3 (lower is better)
Translates to: AAAALLTAEHTV*LAQLHKAAVQA
Trigger: AGCCTGCACAGCCGCTTTGTGGAGCTGAGCGAGGCATACCGTGTGCTCAGCCGTGAGCAGAGCCGCCGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536006.5
3UTR-3UTR CAA 90 bp AAGGAAGCAAAGCGGGAACGCACTGCAGGCCCCATCCAGGTGAGCCCCTCAGGGCACGATCTCGGGGCCTaGGGTTGGCTCGGATGGTGG +
Preference number: 3 (lower is better)
Translates to: KEAKRERTAGPIQVSPSGHDLGA*GWLGWW
Trigger: CCACCATCCGAGCCAACCCAAGGCCCCGAGATCGTG...CCCTGAGGGGCTCACCTGGATGGGGCCTGCAGTGCGTTCCCGCTTTGCTTCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000628077.2
3UTR CCA 72 bp CTAGCCGTTGTCGCTCCTGCTGAAGGATGCCTCTGTTaGCCCTGGCCCGTGCCCGGGCTTCGTTGTAGAAGG +
Preference number: 3 (lower is better)
Translates to: LAVVAPAEGCLC*PWPVPGLRCRR
Trigger: CCTTCTACAACGAAGCCCGGGCACGGGCCAGGGCCAACAGAGGCATCCTTCAGCAGGAGCGACAACGGCTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628077.2
3UTR TCA 72 bp GCTGGTCATCATAGCTGCGGCGGCTCTGCTCACGGCTaGGCACACGGTATGCCTCGCTCAGCTCCACAAAGC +
Preference number: 3 (lower is better)
Translates to: AGHHSCGGSAHG*AHGMPRSAPQS
Trigger: GCTTTGTGGAGCTGAGCGAGGCATACCGTGTGCTCAGCCGTGAGCAGAGCCGCCGCAGCTATGATGACCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536006.5
3UTR GCA 72 bp CTCCTGCTGAAGGATGCCTCTGTTGGCCCTGGCCCGTaGCCGGGCTTCGTTGTAGAAGGCTGTGATGATCCG +
Preference number: 3 (lower is better)
Translates to: LLLKDASVGPGP*PGFVVEGCDDP
Trigger: CGGATCATCACAGCCTTCTACAACGAAGCCCGGGCACGGGCCAGGGCCAACAGAGGCATCCTTCAGCAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628077.2
3UTR TCA 72 bp ATGGACTGTGGTTCGTGGAGACTTTGGGGGACTACCTaGGCGGAGCTGGTCATCATAGCTGCGGCGGCTCTG +
Preference number: 3 (lower is better)
Translates to: MDCGSWRLWGTT*AELVIIAAAAL
Trigger: CAGAGCCGCCGCAGCTATGATGACCAGCTCCGCTCAGGTAGTCCCCCAAAGTCTCCACGAACCACAGTCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536006.5
3UTR-3UTR CAA 90 bp TGCTCACGGCTGAGCACACGGTATGCCTCGCTCAGCTCCACAAAGCGGCTGTGCTCTGGGTGCAGCTCTTaGGACTTGGAGAAGAAAGCT +
Preference number: 3 (lower is better)
Translates to: CSRLSTRYASLSSTKRLCSGCSS*DLEKKA
Trigger: AGCTTTCTTCTCCAAGTCCAAAGAGCTGCACCCAGA...GCACAGCCGCTTTGTGGAGCTGAGCGAGGCATACCGTGTGCTCAGCCGTGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536006.5
3UTR CCA 72 bp TGGGTGGTTGGGATAGGGATCCCGAAGTGTGGTTCCTaGACAGGGAGCAGGGAGCAGAATAGAGCAGGGACA +
Preference number: 3 (lower is better)
Translates to: WVVGIGIPKCGS*TGSREQNRAGT
Trigger: TGTCCCTGCTCTATTCTGCTCCCTGCTCCCTGTCCAGGAACCACACTTCGGGATCCCTATCCCAACCACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355040.8
3UTR CCA 72 bp AGCTGTGTGTTTGGTGGGCAGACTTGTCATGGACTGTaGTTCGTGGAGACTTTGGGGGACTACCTGAGCGGA +
Preference number: 3 (lower is better)
Translates to: SCVFGGQTCHGL*FVETLGDYLSG
Trigger: TCCGCTCAGGTAGTCCCCCAAAGTCTCCACGAACCACAGTCCATGACAAGTCTGCCCACCAAACACACAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536006.5
CDS-3UTR CCA 90 bp CCCGGGGCACGATCTCGGGGCCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGCAGTAAGGGCGGCATaGCGGCGGGCGGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PGARSRGLGLARMVAAAAAVRAA*RRAGSW
Trigger: CCAGCTGCCCGCCCGCCGCCATGCCGCCCTTACTGC...AGCGGCAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAGATCGTGCCCCGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321460.5
ENST00000355040.8
ENST00000628077.2
CDS-3UTR CCA 90 bp CCGGGGCACGATCTCGGGGCCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGGCAGTAAGGGCGGCATaGCGGCGGGCGGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PGHDLGALGWLGWWRLPLAVRAA*RRAGSW
Trigger: CCAGCTGCCCGCCCGCCGCCATGCCGCCCTTACTGC...CAGCGGCAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAGATCGTGCCCCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321460.5
ENST00000355040.8
ENST00000628077.2
CDS-3UTR TCA 90 bp CCCGGGGCACGATCTCGGGGCCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTACCTGCCCCTTCCTCTaGCCCGGGCATCCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: PGARSRGLGLARMVAAAATCPFL*PGHPQP
Trigger: GGGCTGCGGATGCCCGGGTCAGAGGAAGGGGCAGGT...AGCGGCAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAGATCGTGCCCCGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355040.8
ENST00000628077.2
CDS-3UTR CCA 90 bp CCCGGGGCACGATCTCGGGGCCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGAGCAGGGACAGACCTaGCCCGTGCCCGGGCTTCGT +
Preference number: 4 (lower is better)
Translates to: PGARSRGLGLARMVAAAAEQGQT*PVPGLR
Trigger: ACGAAGCCCGGGCACGGGCCAGGTCTGTCCCTGCTC...AGCGGCAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAGATCGTGCCCCGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000355040.8
CDS-3UTR CCA 90 bp CGGGGCACGATCTCGGGGCCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGCGAGCAGGGACAGACCTaGCCCGTGCCCGGGCTTCGT +
Preference number: 4 (lower is better)
Translates to: RGTISGPWVGSDGGGCRCEQGQT*PVPGLR
Trigger: ACGAAGCCCGGGCACGGGCCAGGTCTGTCCCTGCTC...GCAGCGGCAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAGATCGTGCCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000355040.8
CDS-3UTR CCA 90 bp CGGGGCACGATCTCGGGGCCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGCCTCGGGGCCTTGGGTTaGCTCGGATGGTGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: RGTISGPWVGSDGGGCRCLGALG*LGWWRL
Trigger: CAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAG...GCAGCGGCAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAGATCGTGCCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321460.5
ENST00000355040.8
ENST00000628077.2
CDS-3UTR CCA 90 bp CCCGGGGCACGATCTCGGGGCCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTTGCCTCTGTTGGCCCTaGCCCGTGCCCGGGCTTCGT +
Preference number: 4 (lower is better)
Translates to: PGARSRGLGLARMVAAAACLCWP*PVPGLR
Trigger: ACGAAGCCCGGGCACGGGCCAGGGCCAACAGAGGCA...AGCGGCAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAGATCGTGCCCCGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628077.2
CDS-3UTR TCA 90 bp CCCGGGGCACGATCTCGGGGCCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGGCTCTGCTCACGGCTaGGCACACGGTATGCCTCGC +
Preference number: 4 (lower is better)
Translates to: PGARSRGLGLARMVAAAAGSAHG*AHGMPR
Trigger: GCGAGGCATACCGTGTGCTCAGCCGTGAGCAGAGCC...AGCGGCAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAGATCGTGCCCCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321460.5
CDS-3UTR GCA 90 bp CCCGGGGCACGATCTCGGGGCCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTTCGGATGGTGGCGGCTaGCGCTGCCCTAGCCGTTGT +
Preference number: 4 (lower is better)
Translates to: PGARSRGLGLARMVAAAASDGGG*RCPSRC
Trigger: ACAACGGCTAGGGCAGCGGCAGCCGCCACCATCCGA...AGCGGCAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAGATCGTGCCCCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321460.5
ENST00000355040.8
ENST00000628077.2
CDS-3UTR CCA 90 bp CTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGCCCTAGCCGTTGTCGCTCCTGCAGTAAGGGCGGCATaGCGGCGGGCGGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LGLARMVAAAAALAVVAPAVRAA*RRAGSW
Trigger: CCAGCTGCCCGCCCGCCGCCATGCCGCCCTTACTGC...AGGAGCGACAACGGCTAGGGCAGCGGCAGCCGCCACCATCCGAGCCAACCCAAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355040.8
ENST00000628077.2
CDS-3UTR GCA 90 bp GCCGCTGCCCTAGCCGTTGTCGCTCCTGCTGAAGGATGCCTCTGTTGGCCCTGGGCCGGGAGGGAGGGTTaGGGGGCCACAGCCGGCACA +
Preference number: 4 (lower is better)
Translates to: AAALAVVAPAEGCLCWPWAGREG*GATAGT
Trigger: TGTGCCGGCTGTGGCCCCGCAACCCTCCCTCCCGGC...CCAGGGCCAACAGAGGCATCCTTCAGCAGGAGCGACAACGGCTAGGGCAGCGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355040.8
ENST00000628077.2
CDS-3UTR CCA 90 bp CGGGGCACGATCTCGGGGCCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGCACGATCTCGGGGCCTTaGGTTGGCTCGGATGGTGGC +
Preference number: 4 (lower is better)
Translates to: RGTISGPWVGSDGGGCRCTISGP*VGSDGG
Trigger: GCCACCATCCGAGCCAACCCAAGGCCCCGAGATCGT...GCAGCGGCAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAGATCGTGCCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321460.5
ENST00000355040.8
ENST00000628077.2
CDS-3UTR TCA 90 bp CCGGGGCACGATCTCGGGGCCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGCGTTGTCGCTCCTGCTaGAGGATGCCTCTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: PGHDLGALGWLGWWRLPLRCRSC*RMPLLA
Trigger: GGCCAACAGAGGCATCCTTCAGCAGGAGCGACAACG...CAGCGGCAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAGATCGTGCCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321460.5
ENST00000355040.8
ENST00000628077.2
CDS-3UTR GCA 90 bp GCTGAAGGATGCCTCTGTTGGCCCTGGCCCGTGCCCGGGCTTCGTTGTAGAAGGGCCGGGAGGGAGGGTTaGGGGGCCACAGCCGGCACA +
Preference number: 4 (lower is better)
Translates to: AEGCLCWPWPVPGLRCRRAGREG*GATAGT
Trigger: TGTGCCGGCTGTGGCCCCGCAACCCTCCCTCCCGGC...CCTTCTACAACGAAGCCCGGGCACGGGCCAGGGCCAACAGAGGCATCCTTCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628077.2
CDS-3UTR GCA 90 bp CGGGGCACGATCTCGGGGCCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGCGGGTCCCGGTCTGGGTaGAGCTCTTTGGACTTGGAG +
Preference number: 4 (lower is better)
Translates to: RGTISGPWVGSDGGGCRCGSRSG*SSLDLE
Trigger: CTCCAAGTCCAAAGAGCTGCACCCAGACCGGGACCC...GCAGCGGCAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAGATCGTGCCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321460.5
CDS-3UTR GCA 90 bp CGGGGCACGATCTCGGGGCCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGCGACAGACCTGGCCCGTaGCCGGGCTTCGTTGTAGAA +
Preference number: 4 (lower is better)
Translates to: RGTISGPWVGSDGGGCRCDRPGP*PGFVVE
Trigger: TTCTACAACGAAGCCCGGGCACGGGCCAGGTCTGTC...GCAGCGGCAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAGATCGTGCCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000355040.8
CDS-3UTR GCA 90 bp CCCGGGGCACGATCTCGGGGCCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGCTCCTGCTGAAGGATaGCTCTGTTGGCCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: PGARSRGLGLARMVAAAAAPAEG*LCWPWR
Trigger: CCTCCAGGGCCAACAGAGGCATCCTTCAGCAGGAGC...AGCGGCAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAGATCGTGCCCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000355040.8
CDS-3UTR GCA 90 bp CGGGGCACGATCTCGGGGCCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGCAAAGCGGGAACGCACTaGAGGCCCCATCCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: RGTISGPWVGSDGGGCRCKAGTH*RPHPGE
Trigger: CTCACCTGGATGGGGCCTGCAGTGCGTTCCCGCTTT...GCAGCGGCAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAGATCGTGCCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000628077.2
CDS-3UTR CCA 90 bp CCCGGGGCACGATCTCGGGGCCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTACCAGTACTGTGCGTTaGGGGGTGTCCAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PGARSRGLGLARMVAAAATSTVR*GVSRSC
Trigger: GCAGCTCCTGGACACCCCCCAACGCACAGTACTGGT...AGCGGCAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAGATCGTGCCCCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000321460.5
CDS-3UTR CCA 90 bp CCGGGGCACGATCTCGGGGCCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGGGGCACCTGGGTGGTTaGGATAGGGATCCCGAAGTG +
Preference number: 4 (lower is better)
Translates to: PGHDLGALGWLGWWRLPLGHLGG*DRDPEV
Trigger: CACTTCGGGATCCCTATCCCAACCACCCAGGTGCCC...CAGCGGCAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAGATCGTGCCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000355040.8
CDS-3UTR CCA 90 bp CCCGGGGCACGATCTCGGGGCCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGGAGGAGAGGGCACCTaGGTGGTTGGGATAGGGATC +
Preference number: 4 (lower is better)
Translates to: PGARSRGLGLARMVAAAAGGEGT*VVGIGI
Trigger: GATCCCTATCCCAACCACCCAGGTGCCCTCTCCTCC...AGCGGCAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAGATCGTGCCCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000355040.8
CDS-3UTR CCA 90 bp CGATCTCGGGGCCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGCCCTAGCCACGATCTCGGGGCCTTaGGTTGGCTCGGATGGTGGC +
Preference number: 4 (lower is better)
Translates to: RSRGLGLARMVAAAAALATISGP*VGSDGG
Trigger: GCCACCATCCGAGCCAACCCAAGGCCCCGAGATCGT...GGCTAGGGCAGCGGCAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAGATCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355040.8
ENST00000628077.2
CDS-3UTR CCA 90 bp CTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGCCCTAGCCGTTGTCGCTCCTGAAGGATGCCTCTGTTaGCCCTGGCCCGTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: LGLARMVAAAAALAVVAPEGCLC*PWPVPG
Trigger: CCCGGGCACGGGCCAGGGCCAACAGAGGCATCCTTC...AGGAGCGACAACGGCTAGGGCAGCGGCAGCCGCCACCATCCGAGCCAACCCAAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628077.2
CDS-3UTR GCA 90 bp CGATCTCGGGGCCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGCCCTAGCCGACAGACCTGGCCCGTaGCCGGGCTTCGTTGTAGAA +
Preference number: 4 (lower is better)
Translates to: RSRGLGLARMVAAAAALADRPGP*PGFVVE
Trigger: TTCTACAACGAAGCCCGGGCACGGGCCAGGTCTGTC...GGCTAGGGCAGCGGCAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAGATCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355040.8
CDS-3UTR GCA 90 bp GGCACGATCTCGGGGCCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGCCCTGCTCCTGCTGAAGGATaGCTCTGTTGGCCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: GTISGPWVGSDGGGCRCPAPAEG*LCWPWR
Trigger: CCTCCAGGGCCAACAGAGGCATCCTTCAGCAGGAGC...AGGGCAGCGGCAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAGATCGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355040.8
CDS-3UTR CCA 90 bp CGATCTCGGGGCCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGCCCTAGCCCCGAAGTGTGGTTCCTaGACAGGGAGCAGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: RSRGLGLARMVAAAAALAPKCGS*TGSREQ
Trigger: CTGCTCCCTGCTCCCTGTCCAGGAACCACACTTCGG...GGCTAGGGCAGCGGCAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAGATCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355040.8
CDS-3UTR CCA 90 bp CCCGGGGCACGATCTCGGGGCCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTAGGGATCCCGAAGTGTaGTTCCTGGACAGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: PGARSRGLGLARMVAAAARDPEV*FLDREQ
Trigger: CTGCTCCCTGTCCAGGAACCACACTTCGGGATCCCT...AGCGGCAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAGATCGTGCCCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000355040.8
CDS-3UTR CCA 90 bp CCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGCCCTAGCCGTTGTCGCTCCTGCCTCTGTTGGCCCTaGAGGAGAGGGCACCTGGGT +
Preference number: 4 (lower is better)
Translates to: PWVGSDGGGCRCPSRCRSCLCWP*RRGHLG
Trigger: ACCCAGGTGCCCTCTCCTCCAGGGCCAACAGAGGCA...GGAGCGACAACGGCTAGGGCAGCGGCAGCCGCCACCATCCGAGCCAACCCAAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355040.8
CDS-3UTR TCA 90 bp TCTCGGGGCCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGCCCTAGCCGTTTCTGCAAAGGAAGACTaGAGCAGGCCCGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: SRGLGLARMVAAAAALAVSAKED*SRPGEG
Trigger: CCCCTCTCCGGGCCTGCTTCAGTCTTCCTTTGCAGA...AACGGCTAGGGCAGCGGCAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355040.8
ENST00000628077.2
CDS-3UTR GCA 90 bp CTGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAAGCCGGGAGGGAGGGTTaGGGGGCCACAGCCGGCACA +
Preference number: 4 (lower is better)
Translates to: LRITLLRAFRGAGRPGKEAGREG*GATAGT
Trigger: TGTGCCGGCTGTGGCCCCGCAACCCTCCCTCCCGGC...TTCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000321685.7
CDS-3UTR GCA 90 bp GCCGCTGCCCTAGCCGTTGTCGCTCCTGCTGAAGGATGCCTCTGTTGGCCCTGGTCGGATGGTGGCGGCTaGCGCTGCCCTAGCCGTTGT +
Preference number: 4 (lower is better)
Translates to: AAALAVVAPAEGCLCWPWSDGGG*RCPSRC
Trigger: ACAACGGCTAGGGCAGCGGCAGCCGCCACCATCCGA...CCAGGGCCAACAGAGGCATCCTTCAGCAGGAGCGACAACGGCTAGGGCAGCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355040.8
ENST00000628077.2
CDS-3UTR GCA 90 bp GTCGCTCCTGCTGAAGGATGCCTCTGTTGGCCCTGGCCCGTGCCCGGGCTTCGTGTTGGCCCTGGCCCGTaGCCGGGCTTCGTTGTAGAA +
Preference number: 4 (lower is better)
Translates to: VAPAEGCLCWPWPVPGLRVGPGP*PGFVVE
Trigger: TTCTACAACGAAGCCCGGGCACGGGCCAGGGCCAAC...ACGAAGCCCGGGCACGGGCCAGGGCCAACAGAGGCATCCTTCAGCAGGAGCGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628077.2
CDS-3UTR CCA 90 bp TCTGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAGCAGTAAGGGCGGCATaGCGGCGGGCGGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SANHFIARVSGSGPSREGAVRAA*RRAGSW
Trigger: CCAGCTGCCCGCCCGCCGCCATGCCGCCCTTACTGC...TCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000321685.7
CDS-3UTR CCA 90 bp ACGATCTCGGGGCCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGCCCTAGCGGAGGAGAGGGCACCTaGGTGGTTGGGATAGGGATC +
Preference number: 4 (lower is better)
Translates to: TISGPWVGSDGGGCRCPSGGEGT*VVGIGI
Trigger: GATCCCTATCCCAACCACCCAGGTGCCCTCTCCTCC...GCTAGGGCAGCGGCAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAGATCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355040.8
CDS-3UTR TCA 90 bp AAGGAAGCAAAGCGGGAACGCACTGCAGGCCCCATCCAGGTGAGCCCCTCAGGGCCATGCCCGCCAGCATaGGGAGGAGGCAGTACCCCA +
Preference number: 4 (lower is better)
Translates to: KEAKRERTAGPIQVSPSGPCPPA*GGGSTP
Trigger: TGGGGTACTGCCTCCTCCTCATGCTGGCGGGCATGG...CCCTGAGGGGCTCACCTGGATGGGGCCTGCAGTGCGTTCCCGCTTTGCTTCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000321460.5
CDS-3UTR TCA 90 bp GTCGCTCCTGCTGAAGGATGCCTCTGTTGGCCCTGGCCCGTGCCCGGGCTTCGTCGTTGTCGCTCCTGCTaGAGGATGCCTCTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: VAPAEGCLCWPWPVPGLRRCRSC*RMPLLA
Trigger: GGCCAACAGAGGCATCCTTCAGCAGGAGCGACAACG...ACGAAGCCCGGGCACGGGCCAGGGCCAACAGAGGCATCCTTCAGCAGGAGCGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628077.2
CDS-3UTR TCA 90 bp TCTGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAACCTGCCCCTTCCTCTaGCCCGGGCATCCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: SANHFIARVSGSGPSREGTCPFL*PGHPQP
Trigger: GGGCTGCGGATGCCCGGGTCAGAGGAAGGGGCAGGT...TCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321685.7
CDS-3UTR TCA 90 bp ACCTGGGTGGTTGGGATAGGGATCCCGAAGTGTGGTTCCTGGACAGGGAGCAGGACCTGCCCCTTCCTCTaGCCCGGGCATCCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: TWVVGIGIPKCGSWTGSRTCPFL*PGHPQP
Trigger: GGGCTGCGGATGCCCGGGTCAGAGGAAGGGGCAGGT...CCTGCTCCCTGTCCAGGAACCACACTTCGGGATCCCTATCCCAACCACCCAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355040.8
CDS-3UTR GCA 90 bp CTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGCCCTAGCCGTTGTCGCTCCTAAAGCGGGAACGCACTaGAGGCCCCATCCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: LGLARMVAAAAALAVVAPKAGTH*RPHPGE
Trigger: CTCACCTGGATGGGGCCTGCAGTGCGTTCCCGCTTT...AGGAGCGACAACGGCTAGGGCAGCGGCAGCCGCCACCATCCGAGCCAACCCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628077.2
CDS-3UTR GCA 90 bp TCGCTCAGCTCCACAAAGCGGCTGTGCAGGCTTGGGTTCCCAGGGTCCCGGTCTAGAGGGGGCGGTTCTTaGCCAGGACCAGACCCGCGT +
Preference number: 4 (lower is better)
Translates to: SLSSTKRLCRLGFPGSRSRGGGS*PGPDPR
Trigger: ACGCGGGTCTGGTCCTGGGCAAGAACCGCCCCCTCT...AGACCGGGACCCTGGGAACCCAAGCCTGCACAGCCGCTTTGTGGAGCTGAGCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536006.5
CDS-3UTR GCA 90 bp CTAGCCGTTGTCGCTCCTGCTGAAGGATGCCTCTGTTGGCCCTGGCCCGTGCCCGCTCCTGCTGAAGGATaGCTCTGTTGGCCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: LAVVAPAEGCLCWPWPVPAPAEG*LCWPWP
Trigger: GGGCCAGGGCCAACAGAGGCATCCTTCAGCAGGAGC...GGGCACGGGCCAGGGCCAACAGAGGCATCCTTCAGCAGGAGCGACAACGGCTAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628077.2
CDS-3UTR CCA 90 bp CGATCTCGGGGCCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGCCCTAGCCCTACCAAGAGCGCATTaGACCAGGATGGGGCTAGAC +
Preference number: 4 (lower is better)
Translates to: RSRGLGLARMVAAAAALALPRAH*TRMGLD
Trigger: GTCTAGCCCCATCCTGGTCCAATGCGCTCTTGGTAG...GGCTAGGGCAGCGGCAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAGATCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355040.8
ENST00000628077.2
CDS-3UTR CCA 90 bp CCGGGGCACGATCTCGGGGCCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGGTTCATAATAAGTACTaGGTCTGGACCGCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: PGHDLGALGWLGWWRLPLVHNKY*VWTAAR
Trigger: CCGGGCAGCGGTCCAGACCCAGTACTTATTATGAAC...CAGCGGCAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAGATCGTGCCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321460.5
ENST00000355040.8
ENST00000628077.2
CDS-3UTR CCA 90 bp CGGGGCACGATCTCGGGGCCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGCGTTCATAATAAGTACTaGGTCTGGACCGCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: RGTISGPWVGSDGGGCRCVHNKY*VWTAAR
Trigger: CCGGGCAGCGGTCCAGACCCAGTACTTATTATGAAC...GCAGCGGCAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAGATCGTGCCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321460.5
ENST00000355040.8
ENST00000628077.2
CDS-3UTR CCA 90 bp CGGGGCACGATCTCGGGGCCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGCTGGGCAGACTTGTCATaGACTGTGGTTCGTGGAGAC +
Preference number: 4 (lower is better)
Translates to: RGTISGPWVGSDGGGCRCWADLS*TVVRGD
Trigger: GTCTCCACGAACCACAGTCCATGACAAGTCTGCCCA...GCAGCGGCAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAGATCGTGCCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321460.5
CDS-3UTR CCA 90 bp CTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGCCCTAGCCGTTGTCGCTCCTGAAGGATGCCTCTGTTaGCCCTGGAGGAGAGGGCAC +
Preference number: 4 (lower is better)
Translates to: LGLARMVAAAAALAVVAPEGCLC*PWRRGH
Trigger: GTGCCCTCTCCTCCAGGGCCAACAGAGGCATCCTTC...AGGAGCGACAACGGCTAGGGCAGCGGCAGCCGCCACCATCCGAGCCAACCCAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355040.8
CDS-3UTR CCA 90 bp TTGTCGCTCCTGCTGAAGGATGCCTCTGTTGGCCCTGGCCCGTGCCCGGGCTTCACGATCTCGGGGCCTTaGGTTGGCTCGGATGGTGGC +
Preference number: 4 (lower is better)
Translates to: LSLLLKDASVGPGPCPGFTISGP*VGSDGG
Trigger: GCCACCATCCGAGCCAACCCAAGGCCCCGAGATCGT...GAAGCCCGGGCACGGGCCAGGGCCAACAGAGGCATCCTTCAGCAGGAGCGACAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628077.2
CDS-3UTR CCA 90 bp CTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGCCCTAGCCGTTGTCGCTCCTCAGAGGGAAGGGGCCTaGCCCGTTGTTCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: LGLARMVAAAAALAVVAPQREGA*PVVLQR
Trigger: CCTTTGCAGAACAACGGGCCAGGCCCCTTCCCTCTG...AGGAGCGACAACGGCTAGGGCAGCGGCAGCCGCCACCATCCGAGCCAACCCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355040.8
ENST00000628077.2
CDS-3UTR TCA 90 bp GCTGCCGCTGCCCTAGCCGTTGTCGCTCCTGCTGAAGGATGCCTCTGTTGGCCCCGTTGTCGCTCCTGCTaGAGGATGCCTCTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: AAAALAVVAPAEGCLCWPRCRSC*RMPLLA
Trigger: GGCCAACAGAGGCATCCTTCAGCAGGAGCGACAACG...GGGCCAACAGAGGCATCCTTCAGCAGGAGCGACAACGGCTAGGGCAGCGGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355040.8
ENST00000628077.2
CDS-3UTR GCA 90 bp GGGCACCTGGGTGGTTGGGATAGGGATCCCGAAGTGTGGTTCCTGGACAGGGAGAGAGGGGGCGGTTCTTaGCCAGGACCAGACCCGCGT +
Preference number: 4 (lower is better)
Translates to: GHLGGWDRDPEVWFLDRERGGGS*PGPDPR
Trigger: ACGCGGGTCTGGTCCTGGGCAAGAACCGCCCCCTCT...CTCCCTGTCCAGGAACCACACTTCGGGATCCCTATCCCAACCACCCAGGTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355040.8
CDS-3UTR CCA 90 bp GGGCAGACTTGTCATGGACTGTGGTTCGTGGAGACTTTGGGGGACTACCTGAGCGCAGTAAGGGCGGCATaGCGGCGGGCGGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GQTCHGLWFVETLGDYLSAVRAA*RRAGSW
Trigger: CCAGCTGCCCGCCCGCCGCCATGCCGCCCTTACTGC...GCTCAGGTAGTCCCCCAAAGTCTCCACGAACCACAGTCCATGACAAGTCTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536006.5
CDS-3UTR CCA 90 bp CGGGGCACGATCTCGGGGCCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGCACTTGTCATGGACTGTaGTTCGTGGAGACTTTGGGG +
Preference number: 4 (lower is better)
Translates to: RGTISGPWVGSDGGGCRCTCHGL*FVETLG
Trigger: CCCCAAAGTCTCCACGAACCACAGTCCATGACAAGT...GCAGCGGCAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAGATCGTGCCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321460.5
CDS-3UTR CCA 90 bp AAGGAAGCAAAGCGGGAACGCACTGCAGGCCCCATCCAGGTGAGCCCCTCAGGGTGCCTCTGTTGGCCCTaGAGGAGAGGGCACCTGGGT +
Preference number: 4 (lower is better)
Translates to: KEAKRERTAGPIQVSPSGCLCWP*RRGHLG
Trigger: ACCCAGGTGCCCTCTCCTCCAGGGCCAACAGAGGCA...CCCTGAGGGGCTCACCTGGATGGGGCCTGCAGTGCGTTCCCGCTTTGCTTCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321460.5
CDS-3UTR CCA 90 bp CTGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAACTCGGGGCCTTGGGTTaGCTCGGATGGTGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: LRITLLRAFRGAGRPGKELGALG*LGWWRL
Trigger: CAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAG...TTCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000321685.7
CDS-3UTR CCA 90 bp CTGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAATGCCTCTGTTGGCCCTaGCCCGTGCCCGGGCTTCGT +
Preference number: 4 (lower is better)
Translates to: LRITLLRAFRGAGRPGKECLCWP*PVPGLR
Trigger: ACGAAGCCCGGGCACGGGCCAGGGCCAACAGAGGCA...TTCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321685.7
CDS-3UTR CCA 90 bp TCTGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAGAAGGATGCCTCTGTTaGCCCTGGCCCGTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: SANHFIARVSGSGPSREGEGCLC*PWPVPG
Trigger: CCCGGGCACGGGCCAGGGCCAACAGAGGCATCCTTC...TCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321685.7
3UTR CAA 72 bp ATGCCTCGCTCAGCTCCACAAAGCGGCTGTGCAGGCTaGGGTTCCCAGGGTCCCGGTCTGGGTGCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: MPRSAPQSGCAG*GSQGPGLGAAL
Trigger: AAGAGCTGCACCCAGACCGGGACCCTGGGAACCCAAGCCTGCACAGCCGCTTTGTGGAGCTGAGCGAGGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536006.5
CDS-3UTR TCA 90 bp TCTGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAGGCTCTGCTCACGGCTaGGCACACGGTATGCCTCGC +
Preference number: 4 (lower is better)
Translates to: SANHFIARVSGSGPSREGGSAHG*AHGMPR
Trigger: GCGAGGCATACCGTGTGCTCAGCCGTGAGCAGAGCC...TCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000321685.7
CDS-3UTR TCA 90 bp TGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAAGCCATGCCCGCCAGCATaGGGAGGAGGCAGTACCCCA +
Preference number: 4 (lower is better)
Translates to: CESLYCARFGERAVQGRKPCPPA*GGGSTP
Trigger: TGGGGTACTGCCTCCTCCTCATGCTGGCGGGCATGG...CTTCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000321685.7
CDS-3UTR TCA 90 bp CGGTATGCCTCGCTCAGCTCCACAAAGCGGCTGTGCAGGCTTGGGTTCCCAGGGTCTGCAAAGGAAGACTaGAGCAGGCCCGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: RYASLSSTKRLCRLGFPGSAKED*SRPGEG
Trigger: CCCCTCTCCGGGCCTGCTTCAGTCTTCCTTTGCAGA...CCCTGGGAACCCAAGCCTGCACAGCCGCTTTGTGGAGCTGAGCGAGGCATACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536006.5
CDS-3UTR GCA 90 bp CTGCTCACGGCTGAGCACACGGTATGCCTCGCTCAGCTCCACAAAGCGGCTGTGGCTGGTCATCATAGCTaGGGCGGCTCTGCTCACGGC +
Preference number: 4 (lower is better)
Translates to: LLTAEHTVCLAQLHKAAVAGHHS*GGSAHG
Trigger: GCCGTGAGCAGAGCCGCCGCAGCTATGATGACCAGC...CACAGCCGCTTTGTGGAGCTGAGCGAGGCATACCGTGTGCTCAGCCGTGAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536006.5
CDS-3UTR GCA 90 bp AAGGAAGCAAAGCGGGAACGCACTGCAGGCCCCATCCAGGTGAGCCCCTCAGGGGGGGTGTCCAGGAGCTaGTGTGTGTTTGGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: KEAKRERTAGPIQVSPSGGVSRS*CVFGGQ
Trigger: CTGCCCACCAAACACACAGCAGCTCCTGGACACCCC...CCCTGAGGGGCTCACCTGGATGGGGCCTGCAGTGCGTTCCCGCTTTGCTTCCTT
63% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000321460.5
CDS-3UTR GCA 90 bp TCTGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGATCGGATGGTGGCGGCTaGCGCTGCCCTAGCCGTTGT +
Preference number: 4 (lower is better)
Translates to: SANHFIARVSGSGPSREGSDGGG*RCPSRC
Trigger: ACAACGGCTAGGGCAGCGGCAGCCGCCACCATCCGA...TCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000321685.7
CDS-3UTR GCA 90 bp CTGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAAAGAGGGGGCGGTTCTTaGCCAGGACCAGACCCGCGT +
Preference number: 4 (lower is better)
Translates to: LRITLLRAFRGAGRPGKERGGGS*PGPDPR
Trigger: ACGCGGGTCTGGTCCTGGGCAAGAACCGCCCCCTCT...TTCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000321685.7
CDS-3UTR GCA 90 bp TCTCGGGGCCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGCCCTAGCCGTTCCTGGCCCGTTGTTCTaGAAAGGAAGACTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: SRGLGLARMVAAAAALAVPGPLF*KGRLKQ
Trigger: CTGCTTCAGTCTTCCTTTGCAGAACAACGGGCCAGG...AACGGCTAGGGCAGCGGCAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355040.8
ENST00000628077.2
CDS-3UTR CCA 90 bp GCTGCCGCTGCCCTAGCCGTTGTCGCTCCTGCTGAAGGATGCCTCTGTTGGCCCAGGGATCCCGAAGTGTaGTTCCTGGACAGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: AAAALAVVAPAEGCLCWPRDPEV*FLDREQ
Trigger: CTGCTCCCTGTCCAGGAACCACACTTCGGGATCCCT...GGGCCAACAGAGGCATCCTTCAGCAGGAGCGACAACGGCTAGGGCAGCGGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355040.8
CDS-3UTR TCA 90 bp GGCCCTGGCCCGTGCCCGGGCTTCGTTGTAGAAGGCTGTGATGATCCGATCCTTTCTGCAAAGGAAGACTaGAGCAGGCCCGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: GPGPCPGFVVEGCDDPILSAKED*SRPGEG
Trigger: CCCCTCTCCGGGCCTGCTTCAGTCTTCCTTTGCAGA...AAGGATCGGATCATCACAGCCTTCTACAACGAAGCCCGGGCACGGGCCAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628077.2
CDS-3UTR GCA 90 bp GTGGAGACTTTGGGGGACTACCTGAGCGGAGCTGGTCATCATAGCTGCGGCGGCTCCACAAAGCGGCTGTaGAGGCTTGGGTTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: VETLGDYLSGAGHHSCGGSTKRL*RLGFPG
Trigger: CCCTGGGAACCCAAGCCTGCACAGCCGCTTTGTGGA...GCCGCCGCAGCTATGATGACCAGCTCCGCTCAGGTAGTCCCCCAAAGTCTCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536006.5
CDS-3UTR GCA 90 bp CTGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAAGCTGGTCATCATAGCTaGGGCGGCTCTGCTCACGGC +
Preference number: 4 (lower is better)
Translates to: LRITLLRAFRGAGRPGKEAGHHS*GGSAHG
Trigger: GCCGTGAGCAGAGCCGCCGCAGCTATGATGACCAGC...TTCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000321685.7
CDS-3UTR GCA 90 bp TGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAAGGCTGGTCATCATAGCTaGGGCGGCTCTGCTCACGGC +
Preference number: 4 (lower is better)
Translates to: CESLYCARFGERAVQGRKAGHHS*GGSAHG
Trigger: GCCGTGAGCAGAGCCGCCGCAGCTATGATGACCAGC...CTTCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000321685.7
CDS-3UTR GCA 90 bp CTGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAAGTTGGCCCTGGCCCGTaGCCGGGCTTCGTTGTAGAA +
Preference number: 4 (lower is better)
Translates to: LRITLLRAFRGAGRPGKEVGPGP*PGFVVE
Trigger: TTCTACAACGAAGCCCGGGCACGGGCCAGGGCCAAC...TTCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321685.7
CDS-3UTR GCA 90 bp TCTGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAGCTCCTGCTGAAGGATaGCTCTGTTGGCCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: SANHFIARVSGSGPSREGAPAEG*LCWPWP
Trigger: GGGCCAGGGCCAACAGAGGCATCCTTCAGCAGGAGC...TCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321685.7
CDS-3UTR CCA 90 bp CTAGCCGTTGTCGCTCCTGCTGAAGGATGCCTCTGTTGGCCCTGGCCCGTGCCCCTACCAAGAGCGCATTaGACCAGGATGGGGCTAGAC +
Preference number: 4 (lower is better)
Translates to: LAVVAPAEGCLCWPWPVPLPRAH*TRMGLD
Trigger: GTCTAGCCCCATCCTGGTCCAATGCGCTCTTGGTAG...GGGCACGGGCCAGGGCCAACAGAGGCATCCTTCAGCAGGAGCGACAACGGCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628077.2
CDS-3UTR CCA 90 bp TCTGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAACGATCTCGGGGCCTTaGGTTGGCTCGGATGGTGGC +
Preference number: 4 (lower is better)
Translates to: SANHFIARVSGSGPSREGTISGP*VGSDGG
Trigger: GCCACCATCCGAGCCAACCCAAGGCCCCGAGATCGT...TCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000321685.7
CDS-3UTR TCA 90 bp TGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAAGCGTTGTCGCTCCTGCTaGAGGATGCCTCTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: CESLYCARFGERAVQGRKRCRSC*RMPLLA
Trigger: GGCCAACAGAGGCATCCTTCAGCAGGAGCGACAACG...CTTCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000321685.7
CDS-3UTR TCA 90 bp TCTGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGATCTGCAAAGGAAGACTaGAGCAGGCCCGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: SANHFIARVSGSGPSREGSAKED*SRPGEG
Trigger: CCCCTCTCCGGGCCTGCTTCAGTCTTCCTTTGCAGA...TCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321685.7
CDS-3UTR GCA 90 bp TCTGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGATCCACAAAGCGGCTGTaGAGGCTTGGGTTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: SANHFIARVSGSGPSREGSTKRL*RLGFPG
Trigger: CCCTGGGAACCCAAGCCTGCACAGCCGCTTTGTGGA...TCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000321685.7
CDS-3UTR GCA 90 bp CTGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAATCCACAAAGCGGCTGTaGAGGCTTGGGTTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LRITLLRAFRGAGRPGKESTKRL*RLGFPG
Trigger: CCCTGGGAACCCAAGCCTGCACAGCCGCTTTGTGGA...TTCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000321685.7
CDS-3UTR GCA 90 bp AAGGAAGCAAAGCGGGAACGCACTGCAGGCCCCATCCAGGTGAGCCCCTCAGGGTGTTTGTGTTGCTGCTaGCTCAACTGGGGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: KEAKRERTAGPIQVSPSGCLCCC*LNWGPC
Trigger: ACAGGGGCCCCAGTTGAGGCAGCAGCAACACAAACA...CCCTGAGGGGCTCACCTGGATGGGGCCTGCAGTGCGTTCCCGCTTTGCTTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000321460.5
CDS-3UTR GCA 90 bp TGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAAGAAAGCGGGAACGCACTaGAGGCCCCATCCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: CESLYCARFGERAVQGRKKAGTH*RPHPGE
Trigger: CTCACCTGGATGGGGCCTGCAGTGCGTTCCCGCTTT...CTTCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000321685.7
CDS-3UTR GCA 90 bp AAGGAAGCAAAGCGGGAACGCACTGCAGGCCCCATCCAGGTGAGCCCCTCAGGGTGCGAATCACTTTATTaGGCGCGTTTCGGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: KEAKRERTAGPIQVSPSGCESLY*ARFGER
Trigger: CCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCA...CCCTGAGGGGCTCACCTGGATGGGGCCTGCAGTGCGTTCCCGCTTTGCTTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000321460.5
CDS-3UTR CCA 90 bp AAGGAAGCAAAGCGGGAACGCACTGCAGGCCCCATCCAGGTGAGCCCCTCAGGGCTACCAAGAGCGCATTaGACCAGGATGGGGCTAGAC +
Preference number: 4 (lower is better)
Translates to: KEAKRERTAGPIQVSPSGLPRAH*TRMGLD
Trigger: GTCTAGCCCCATCCTGGTCCAATGCGCTCTTGGTAG...CCCTGAGGGGCTCACCTGGATGGGGCCTGCAGTGCGTTCCCGCTTTGCTTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000628077.2
CDS-3UTR CCA 90 bp TGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAAGCCCAGGGTCCCGGTCTaGGTGCAGCTCTTTGGACTT +
Preference number: 4 (lower is better)
Translates to: CESLYCARFGERAVQGRKPRVPV*VQLFGL
Trigger: AAGTCCAAAGAGCTGCACCCAGACCGGGACCCTGGG...CTTCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000321685.7
CDS-3UTR CCA 90 bp TCTGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGACCCAGGGTCCCGGTCTaGGTGCAGCTCTTTGGACTT +
Preference number: 4 (lower is better)
Translates to: SANHFIARVSGSGPSREGPRVPV*VQLFGL
Trigger: AAGTCCAAAGAGCTGCACCCAGACCGGGACCCTGGG...TCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000321685.7
CDS-3UTR CCA 90 bp CTCGCTCAGCTCCACAAAGCGGCTGTGCAGGCTTGGGTTCCCAGGGTCCCGGTCATGGACTGTGGTTCGTaGAGACTTTGGGGGACTACC +
Preference number: 4 (lower is better)
Translates to: LAQLHKAAVQAWVPRVPVMDCGS*RLWGTT
Trigger: GGTAGTCCCCCAAAGTCTCCACGAACCACAGTCCAT...GACCGGGACCCTGGGAACCCAAGCCTGCACAGCCGCTTTGTGGAGCTGAGCGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536006.5
CDS-3UTR CCA 90 bp TGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAAGCAACTGGGGCCCCTGTaGCCTCACGCTGTGAAACTG +
Preference number: 4 (lower is better)
Translates to: CESLYCARFGERAVQGRKQLGPL*PHAVKL
Trigger: CAGTTTCACAGCGTGAGGCCACAGGGGCCCCAGTTG...CTTCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000321685.7
CDS-3UTR CCA 90 bp CTGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAACAACTGGGGCCCCTGTaGCCTCACGCTGTGAAACTG +
Preference number: 4 (lower is better)
Translates to: LRITLLRAFRGAGRPGKEQLGPL*PHAVKL
Trigger: CAGTTTCACAGCGTGAGGCCACAGGGGCCCCAGTTG...TTCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000321685.7
CDS-3UTR CCA 90 bp TCTGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGACCGAAGTGTGGTTCCTaGACAGGGAGCAGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: SANHFIARVSGSGPSREGPKCGS*TGSREQ
Trigger: CTGCTCCCTGCTCCCTGTCCAGGAACCACACTTCGG...TCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321460.5
CDS-3UTR CCA 90 bp TGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAAGGAAGGATGCCTCTGTTaGCCCTGGAGGAGAGGGCAC +
Preference number: 4 (lower is better)
Translates to: CESLYCARFGERAVQGRKEGCLC*PWRRGH
Trigger: GTGCCCTCTCCTCCAGGGCCAACAGAGGCATCCTTC...CTTCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321460.5
CDS-3UTR CCA 90 bp TGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAAGCAGAGGGAAGGGGCCTaGCCCGTTGTTCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: CESLYCARFGERAVQGRKQREGA*PVVLQR
Trigger: CCTTTGCAGAACAACGGGCCAGGCCCCTTCCCTCTG...CTTCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321685.7
CDS-3UTR GCA 90 bp GGGTGCAGCTCTTTGGACTTGGAGAAGAAAGCTCGTTTAACTTCCTCAGTGCTGGCCGGGAGGGAGGGTTaGGGGGCCACAGCCGGCACA +
Preference number: 4 (lower is better)
Translates to: GCSSLDLEKKARLTSSVLAGREG*GATAGT
Trigger: TGTGCCGGCTGTGGCCCCGCAACCCTCCCTCCCGGC...CAGCACTGAGGAAGTTAAACGAGCTTTCTTCTCCAAGTCCAAAGAGCTGCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536006.5
CDS-3UTR GCA 90 bp CTGGTCATCATAGCTGCGGCGGCTCTGCTCACGGCTGAGCACACGGTATGCCTCGCTGAGCACACGGTATaGCTCGCTCAGCTCCACAAA +
Preference number: 4 (lower is better)
Translates to: LVIIAAAALLTAEHTVCLAEHTV*LAQLHK
Trigger: TTTGTGGAGCTGAGCGAGGCATACCGTGTGCTCAGC...GAGGCATACCGTGTGCTCAGCCGTGAGCAGAGCCGCCGCAGCTATGATGACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536006.5
CDS-3UTR GCA 90 bp GCTGAAGGATGCCTCTGTTGGCCCTGGCCCGTGCCCGGGCTTCGTTGTAGAAGGCCTGGCCCGTTGTTCTaGAAAGGAAGACTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: AEGCLCWPWPVPGLRCRRPGPLF*KGRLKQ
Trigger: CTGCTTCAGTCTTCCTTTGCAGAACAACGGGCCAGG...CCTTCTACAACGAAGCCCGGGCACGGGCCAGGGCCAACAGAGGCATCCTTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628077.2
CDS-3UTR GCA 90 bp ACGATCTCGGGGCCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGCCCTAGCTCCATGAAGTTAAGGTaGATCTGCTTCACCTTCCTC +
Preference number: 4 (lower is better)
Translates to: TISGPWVGSDGGGCRCPSSMKLR*ICFTFL
Trigger: GAGGAAGGTGAAGCAGATGCACCTTAACTTCATGGA...GCTAGGGCAGCGGCAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAGATCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355040.8
ENST00000628077.2
CDS-3UTR CCA 90 bp AGACCTGGCCCGTGCCCGGGCTTCGTTGTAGAAGGCTGTGATGATCCGATCCTTGGGCACCTGGGTGGTTaGGATAGGGATCCCGAAGTG +
Preference number: 4 (lower is better)
Translates to: RPGPCPGFVVEGCDDPILGHLGG*DRDPEV
Trigger: CACTTCGGGATCCCTATCCCAACCACCCAGGTGCCC...AAGGATCGGATCATCACAGCCTTCTACAACGAAGCCCGGGCACGGGCCAGGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355040.8
CDS-3UTR CCA 90 bp CCGTGCCCGGGCTTCGTTGTAGAAGGCTGTGATGATCCGATCCTTTTCATCCATCTCGGGGCCTTGGGTTaGCTCGGATGGTGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: PCPGFVVEGCDDPILFIHLGALG*LGWWRL
Trigger: CAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAG...ATGGATGAAAAGGATCGGATCATCACAGCCTTCTACAACGAAGCCCGGGCACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355040.8
ENST00000628077.2
CDS-3UTR CCA 90 bp TGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAAGACCAGTACTGTGCGTTaGGGGGTGTCCAGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: CESLYCARFGERAVQGRKTSTVR*GVSRSC
Trigger: ACAGCTCCTGGACACCCCCCAACGCACAGTACTGGT...CTTCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000321685.7
CDS-3UTR TCA 90 bp AGTACTGGGTCTGGACCTGGACTCAAACTTCCTCCTCTGCCGCTTAAATCGGTGGGCTCTGCTCACGGCTaGGCACACGGTATGCCTCGC +
Preference number: 4 (lower is better)
Translates to: STGSGPGLKLPPLPLKSVGSAHG*AHGMPR
Trigger: GCGAGGCATACCGTGTGCTCAGCCGTGAGCAGAGCC...CACCGATTTAAGCGGCAGAGGAGGAAGTTTGAGTCCAGGTCCAGACCCAGTACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536006.5
CDS-3UTR TCA 90 bp CTGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAACTTTGGGGGACTACCTaGGCGGAGCTGGTCATCATA +
Preference number: 4 (lower is better)
Translates to: LRITLLRAFRGAGRPGKELWGTT*AELVII
Trigger: TATGATGACCAGCTCCGCTCAGGTAGTCCCCCAAAG...TTCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000321685.7
CDS-3UTR TCA 90 bp TGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAAGCTTTGGGGGACTACCTaGGCGGAGCTGGTCATCATA +
Preference number: 4 (lower is better)
Translates to: CESLYCARFGERAVQGRKLWGTT*AELVII
Trigger: TATGATGACCAGCTCCGCTCAGGTAGTCCCCCAAAG...CTTCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000321685.7
CDS-3UTR GCA 90 bp TGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAAGGCTGAGCACACGGTATaGCTCGCTCAGCTCCACAAA +
Preference number: 4 (lower is better)
Translates to: CESLYCARFGERAVQGRKAEHTV*LAQLHK
Trigger: TTTGTGGAGCTGAGCGAGGCATACCGTGTGCTCAGC...CTTCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000321685.7
CDS-3UTR GCA 90 bp TCTGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGATGTTTGTGTTGCTGCTaGCTCAACTGGGGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: SANHFIARVSGSGPSREGCLCCC*LNWGPC
Trigger: ACAGGGGCCCCAGTTGAGGCAGCAGCAACACAAACA...TCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000321685.7
CDS-3UTR GCA 90 bp TGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAAGTGCGAATCACTTTATTaGGCGCGTTTCGGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: CESLYCARFGERAVQGRKCESLY*ARFGER
Trigger: CCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCA...CTTCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000321685.7
CDS-3UTR CCA 90 bp CTGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAACTACCAAGAGCGCATTaGACCAGGATGGGGCTAGAC +
Preference number: 4 (lower is better)
Translates to: LRITLLRAFRGAGRPGKELPRAH*TRMGLD
Trigger: GTCTAGCCCCATCCTGGTCCAATGCGCTCTTGGTAG...TTCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000321685.7
CDS-3UTR CCA 90 bp GTGGAGACTTTGGGGGACTACCTGAGCGGAGCTGGTCATCATAGCTGCGGCGGCTGGGCAGACTTGTCATaGACTGTGGTTCGTGGAGAC +
Preference number: 4 (lower is better)
Translates to: VETLGDYLSGAGHHSCGGWADLS*TVVRGD
Trigger: GTCTCCACGAACCACAGTCCATGACAAGTCTGCCCA...GCCGCCGCAGCTATGATGACCAGCTCCGCTCAGGTAGTCCCCCAAAGTCTCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536006.5
CDS-3UTR CCA 90 bp GTGTTTGGTGGGCAGACTTGTCATGGACTGTGGTTCGTGGAGACTTTGGGGGACTACCTGAGACAAACCTaGGAGCCTCCGCTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: VFGGQTCHGLWFVETLGDYLRQT*EPPLPG
Trigger: GCCGGGCAGCGGAGGCTCCCAGGTTTGTCTCAGGTA...GTCCCCCAAAGTCTCCACGAACCACAGTCCATGACAAGTCTGCCCACCAAACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536006.5
CDS-3UTR GCA 90 bp TGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAAGTTTTGTTTGTGTTGCTaGTGCCTCAACTGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: CESLYCARFGERAVQGRKFCLCC*CLNWGP
Trigger: GGGGCCCCAGTTGAGGCAGCAGCAACACAAACAAAA...CTTCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000321685.7
CDS-3UTR GCA 90 bp CTGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAATTTTGTTTGTGTTGCTaGTGCCTCAACTGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: LRITLLRAFRGAGRPGKEFCLCC*CLNWGP
Trigger: GGGGCCCCAGTTGAGGCAGCAGCAACACAAACAAAA...TTCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000321685.7
CDS-3UTR GCA 90 bp CTGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAACCTGGCCCGTTGTTCTaGAAAGGAAGACTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: LRITLLRAFRGAGRPGKEPGPLF*KGRLKQ
Trigger: CTGCTTCAGTCTTCCTTTGCAGAACAACGGGCCAGG...TTCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321685.7
CDS-3UTR GCA 90 bp CTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGCCCTAGCCGTTGTCGCTCCTAAGTTAAGGTGCATCTaGTTCACCTTCCTCTTTGGA +
Preference number: 4 (lower is better)
Translates to: LGLARMVAAAAALAVVAPKLRCI*FTFLFG
Trigger: TCCAAAGAGGAAGGTGAAGCAGATGCACCTTAACTT...AGGAGCGACAACGGCTAGGGCAGCGGCAGCCGCCACCATCCGAGCCAACCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355040.8
ENST00000628077.2
CDS-3UTR CCA 90 bp TGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAAGGTTCATAATAAGTACTaGGTCTGGACCGCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: CESLYCARFGERAVQGRKVHNKY*VWTAAR
Trigger: CCGGGCAGCGGTCCAGACCCAGTACTTATTATGAAC...CTTCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000321685.7
CDS-3UTR CCA 90 bp TGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAAGATGGACTGTGGTTCGTaGAGACTTTGGGGGACTACC +
Preference number: 4 (lower is better)
Translates to: CESLYCARFGERAVQGRKMDCGS*RLWGTT
Trigger: GGTAGTCCCCCAAAGTCTCCACGAACCACAGTCCAT...CTTCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000321685.7
CDS-3UTR CCA 90 bp TATGCCTCGCTCAGCTCCACAAAGCGGCTGTGCAGGCTTGGGTTCCCAGGGTCCACTTGTCATGGACTGTaGTTCGTGGAGACTTTGGGG +
Preference number: 4 (lower is better)
Translates to: YASLSSTKRLCRLGFPGSTCHGL*FVETLG
Trigger: CCCCAAAGTCTCCACGAACCACAGTCCATGACAAGT...GGACCCTGGGAACCCAAGCCTGCACAGCCGCTTTGTGGAGCTGAGCGAGGCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536006.5
CDS-3UTR CCA 90 bp TCTGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGATGGGCAGACTTGTCATaGACTGTGGTTCGTGGAGAC +
Preference number: 4 (lower is better)
Translates to: SANHFIARVSGSGPSREGWADLS*TVVRGD
Trigger: GTCTCCACGAACCACAGTCCATGACAAGTCTGCCCA...TCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000321685.7
CDS-3UTR CCA 90 bp TGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAAGGAGCTGCTGTGTGTTTaGTGGGCAGACTTGTCATGG +
Preference number: 4 (lower is better)
Translates to: CESLYCARFGERAVQGRKELLCV*WADLSW
Trigger: CCATGACAAGTCTGCCCACCAAACACACAGCAGCTC...CTTCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321460.5
CDS-3UTR CCA 90 bp ACTTGTCATGGACTGTGGTTCGTGGAGACTTTGGGGGACTACCTGAGCGGAGCTCAGAGGGAAGGGGCCTaGCCCGTTGTTCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: TCHGLWFVETLGDYLSGAQREGA*PVVLQR
Trigger: CCTTTGCAGAACAACGGGCCAGGCCCCTTCCCTCTG...AGCTCCGCTCAGGTAGTCCCCCAAAGTCTCCACGAACCACAGTCCATGACAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536006.5
CDS-3UTR CCA 90 bp TGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAAGCAGGAGCTGTGTGTTTaGTGGGCAGACTTGTCATGG +
Preference number: 4 (lower is better)
Translates to: CESLYCARFGERAVQGRKQELCV*WADLSW
Trigger: CCATGACAAGTCTGCCCACCAAACACACAGCTCCTG...CTTCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321685.7
CDS-3UTR CCA 90 bp TGGACAGGGAGCAGGGAGCAGAATAGAGCAGGGACAGACCTGGCCCGTGCCCGGCTTCACCTTCCTCTTTaGACTTGGAGAAGAAAGCTC +
Preference number: 4 (lower is better)
Translates to: WTGSREQNRAGTDLARARLHLPL*TWRRKL
Trigger: GAGCTTTCTTCTCCAAGTCCAAAGAGGAAGGTGAAG...CCGGGCACGGGCCAGGTCTGTCCCTGCTCTATTCTGCTCCCTGCTCCCTGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355040.8
CDS-3UTR CCA 90 bp TTGTCGCTCCTGCTGAAGGATGCCTCTGTTGGCCCTGGCCCGTGCCCGGGCTTCCTTCACCTTCCTCTTTaGACTTGGAGAAGAAAGCTC +
Preference number: 4 (lower is better)
Translates to: LSLLLKDASVGPGPCPGFLHLPL*TWRRKL
Trigger: GAGCTTTCTTCTCCAAGTCCAAAGAGGAAGGTGAAG...GAAGCCCGGGCACGGGCCAGGGCCAACAGAGGCATCCTTCAGCAGGAGCGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628077.2
CDS-3UTR GCA 90 bp AAGGAAGCAAAGCGGGAACGCACTGCAGGCCCCATCCAGGTGAGCCCCTCAGGGAAGTTAAGGTGCATCTaGTTCACCTTCCTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: KEAKRERTAGPIQVSPSGKLRCI*FTFLKA
Trigger: TGCCTTCAGGAAGGTGAAGCAGATGCACCTTAACTT...CCCTGAGGGGCTCACCTGGATGGGGCCTGCAGTGCGTTCCCGCTTTGCTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321460.5
CDS-3UTR GCA 90 bp TGCCCGGGCTTCGTTGTAGAAGGCTGTGATGATCCGATCCTTTTCATCCATGAAAGAGGGGGCGGTTCTTaGCCAGGACCAGACCCGCGT +
Preference number: 4 (lower is better)
Translates to: CPGFVVEGCDDPILFIHERGGGS*PGPDPR
Trigger: ACGCGGGTCTGGTCCTGGGCAAGAACCGCCCCCTCT...TTCATGGATGAAAAGGATCGGATCATCACAGCCTTCTACAACGAAGCCCGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355040.8
ENST00000628077.2
CDS-3UTR GCA 90 bp CTAGCCGTTGTCGCTCCTGCTGAAGGATGCCTCTGTTGGCCCTGGCCCGTGCCCAAGTTAAGGTGCATCTaGTTCACCTTCCTCTTTGGA +
Preference number: 4 (lower is better)
Translates to: LAVVAPAEGCLCWPWPVPKLRCI*FTFLFG
Trigger: TCCAAAGAGGAAGGTGAAGCAGATGCACCTTAACTT...GGGCACGGGCCAGGGCCAACAGAGGCATCCTTCAGCAGGAGCGACAACGGCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628077.2
CDS-3UTR CCA 90 bp CTGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAAACTTGTCATGGACTGTaGTTCGTGGAGACTTTGGGG +
Preference number: 4 (lower is better)
Translates to: LRITLLRAFRGAGRPGKETCHGL*FVETLG
Trigger: CCCCAAAGTCTCCACGAACCACAGTCCATGACAAGT...TTCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000321685.7
CDS-3UTR CCA 90 bp TCTGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGACTGCTGTGTGTTTGGTaGGCAGACTTGTCATGGACT +
Preference number: 4 (lower is better)
Translates to: SANHFIARVSGSGPSREGLLCVW*ADLSWT
Trigger: AGTCCATGACAAGTCTGCCCACCAAACACACAGCAG...TCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321460.5
CDS-3UTR CCA 90 bp CTGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAAGAGCTGTGTGTTTGGTaGGCAGACTTGTCATGGACT +
Preference number: 4 (lower is better)
Translates to: LRITLLRAFRGAGRPGKEELCVW*ADLSWT
Trigger: AGTCCATGACAAGTCTGCCCACCAAACACACAGCTC...TTCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321685.7
CDS-3UTR TCA 90 bp TTGGAGAAGAAAGCTCGTTTAACTTCCTCAGTGCTGGCACCAGGATGCACCCCCAAGGCGAGGGTTACCTaGGACAAACCTGGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: LEKKARLTSSVLAPGCTPKARVT*DKPGSL
Trigger: GAGGCTCCCAGGTTTGTCTCAGGTAACCCTCGCCTT...GGGGGTGCATCCTGGTGCCAGCACTGAGGAAGTTAAACGAGCTTTCTTCTCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536006.5
CDS-3UTR CCA 90 bp CTGCTCACGGCTGAGCACACGGTATGCCTCGCTCAGCTCCACAAAGCGGCTGTGAATAAGTACTGGGTCTaGACCTGGACTCAAACTTCC +
Preference number: 4 (lower is better)
Translates to: LLTAEHTVCLAQLHKAAVNKYWV*TWTQTS
Trigger: GGAAGTTTGAGTCCAGGTCCAGACCCAGTACTTATT...CACAGCCGCTTTGTGGAGCTGAGCGAGGCATACCGTGTGCTCAGCCGTGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536006.5
CDS-3UTR GCA 90 bp TCTGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAAAGTTAAGGTGCATCTaGTTCACCTTCCTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: SANHFIARVSGSGPSREGKLRCI*FTFLKA
Trigger: TGCCTTCAGGAAGGTGAAGCAGATGCACCTTAACTT...TCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000321685.7
CDS-3UTR GCA 90 bp TGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAAGTCCATGAAGTTAAGGTaGATCTGCTTCACCTTCCTG +
Preference number: 4 (lower is better)
Translates to: CESLYCARFGERAVQGRKSMKLR*ICFTFL
Trigger: CAGGAAGGTGAAGCAGATGCACCTTAACTTCATGGA...CTTCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000321685.7
CDS-3UTR GCA 90 bp TCTGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGATCCATGAAGTTAAGGTaGATCTGCTTCACCTTCCTG +
Preference number: 4 (lower is better)
Translates to: SANHFIARVSGSGPSREGSMKLR*ICFTFL
Trigger: CAGGAAGGTGAAGCAGATGCACCTTAACTTCATGGA...TCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000321685.7
CDS-3UTR CCA 90 bp TGGCACCAGGATGCACCCCCAACAGTTCATAATAAGTACTGGGTCTGGACCTGGCTACCAAGAGCGCATTaGACCAGGATGGGGCTAGAC +
Preference number: 4 (lower is better)
Translates to: WHQDAPPTVHNKYWVWTWLPRAH*TRMGLD
Trigger: GTCTAGCCCCATCCTGGTCCAATGCGCTCTTGGTAG...CCAGGTCCAGACCCAGTACTTATTATGAACTGTTGGGGGTGCATCCTGGTGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536006.5
CDS-3UTR CCA 90 bp TGCCCGGGCTTCGTTGTAGAAGGCTGTGATGATCCGATCCTTTTCATCCATGAACAGAGGGAAGGGGCCTaGCCCGTTGTTCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: CPGFVVEGCDDPILFIHEQREGA*PVVLQR
Trigger: CCTTTGCAGAACAACGGGCCAGGCCCCTTCCCTCTG...TTCATGGATGAAAAGGATCGGATCATCACAGCCTTCTACAACGAAGCCCGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355040.8
ENST00000628077.2
CDS-3UTR CCA 90 bp TTGGAGAAGAAAGCTCGTTTAACTTCCTCAGTGCTGGCACCAGGATGCACCCCCCAGGAGCTGTGTGTTTaGTGGGCAGACTTGTCATGG +
Preference number: 4 (lower is better)
Translates to: LEKKARLTSSVLAPGCTPQELCV*WADLSW
Trigger: CCATGACAAGTCTGCCCACCAAACACACAGCTCCTG...GGGGGTGCATCCTGGTGCCAGCACTGAGGAAGTTAAACGAGCTTTCTTCTCCAA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000536006.5
CDS-3UTR GCA 90 bp CTCAGTGCTGGCACCAGGATGCACCCCCAACAGTTCATAATAAGTACTGGGTCTCCTGGCCCGTTGTTCTaGAAAGGAAGACTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: LSAGTRMHPQQFIISTGSPGPLF*KGRLKQ
Trigger: CTGCTTCAGTCTTCCTTTGCAGAACAACGGGCCAGG...AGACCCAGTACTTATTATGAACTGTTGGGGGTGCATCCTGGTGCCAGCACTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536006.5
CDS-3UTR CCA 90 bp GGTCTGGACCTGGACTCAAACTTCCTCCTCTGCCGCTTAAATCGGTGTATGACCGAGCTGTGTGTTTGGTaGGCAGACTTGTCATGGACT +
Preference number: 4 (lower is better)
Translates to: GLDLDSNFLLCRLNRCMTELCVW*ADLSWT
Trigger: AGTCCATGACAAGTCTGCCCACCAAACACACAGCTC...GGTCATACACCGATTTAAGCGGCAGAGGAGGAAGTTTGAGTCCAGGTCCAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536006.5
CDS-3UTR CCA 90 bp TGCCCGGGCTTCGTTGTAGAAGGCTGTGATGATCCGATCCTTTTCATCCATGAAGTTCATAATAAGTACTaGGTCTGGACCGCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: CPGFVVEGCDDPILFIHEVHNKY*VWTAAR
Trigger: CCGGGCAGCGGTCCAGACCCAGTACTTATTATGAAC...TTCATGGATGAAAAGGATCGGATCATCACAGCCTTCTACAACGAAGCCCGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355040.8
ENST00000628077.2
CDS-3UTR GCA 90 bp TGGCACCAGGATGCACCCCCAACAGTTCATAATAAGTACTGGGTCTGGACCTGGTCAAACTTCCTCCTCTaGCGCTTAAATCGGTGTATG +
Preference number: 4 (lower is better)
Translates to: WHQDAPPTVHNKYWVWTWSNFLL*RLNRCM
Trigger: CATACACCGATTTAAGCGGCAGAGGAGGAAGTTTGA...CCAGGTCCAGACCCAGTACTTATTATGAACTGTTGGGGGTGCATCCTGGTGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536006.5
CDS-3UTR GCA 90 bp TGCCCGGGCTTCGTTGTAGAAGGCTGTGATGATCCGATCCTTTTCATCCATGAATCCATGAAGTTAAGGTaGATCTGCTTCACCTTCCTC +
Preference number: 4 (lower is better)
Translates to: CPGFVVEGCDDPILFIHESMKLR*ICFTFL
Trigger: GAGGAAGGTGAAGCAGATGCACCTTAACTTCATGGA...TTCATGGATGAAAAGGATCGGATCATCACAGCCTTCTACAACGAAGCCCGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355040.8
ENST00000628077.2
CDS-3UTR CAA 90 bp ATCTCGGGGCCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGCCCTAGCCGTAGCCGGGAGGGAGGGTaGCGGGGCCACAGCCGGCAC +
Preference number: 5 (lower is better)
Translates to: ISGPWVGSDGGGCRCPSRSREGG*RGHSRH
Trigger: GTGCCGGCTGTGGCCCCGCAACCCTCCCTCCCGGCT...ACGGCTAGGGCAGCGGCAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAGAT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355040.8
ENST00000628077.2
CDS-3UTR CAA 90 bp CCCGGGGCACGATCTCGGGGCCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGAGAGGGGGCGGTTCTaGCCCAGGACCAGACCCGCG +
Preference number: 5 (lower is better)
Translates to: PGARSRGLGLARMVAAAAERGRF*PRTRPA
Trigger: CGCGGGTCTGGTCCTGGGCAAGAACCGCCCCCTCTC...AGCGGCAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAGATCGTGCCCCGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355040.8
ENST00000628077.2
CDS-3UTR CAA 90 bp GGACAGGGAGCAGGGAGCAGAATAGAGCAGGGACAGACCTGGCCCGTGCCCGGGAGCCGGGAGGGAGGGTaGCGGGGCCACAGCCGGCAC +
Preference number: 5 (lower is better)
Translates to: GQGAGSRIEQGQTWPVPGSREGG*RGHSRH
Trigger: GTGCCGGCTGTGGCCCCGCAACCCTCCCTCCCGGCT...CCCGGGCACGGGCCAGGTCTGTCCCTGCTCTATTCTGCTCCCTGCTCCCTGTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355040.8
CDS-3UTR CAA 90 bp CGGGGCACGATCTCGGGGCCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGCAGCGGCTGTGCAGGCTaGGGTTCCCAGGGTCCCGGT +
Preference number: 5 (lower is better)
Translates to: RGTISGPWVGSDGGGCRCSGCAG*GSQGPG
Trigger: ACCGGGACCCTGGGAACCCAAGCCTGCACAGCCGCT...GCAGCGGCAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAGATCGTGCCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321460.5
CDS-3UTR CAA 90 bp ATCTCGGGGCCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGCCCTAGCCGTCACGATCTCGGGGCCTaGGGTTGGCTCGGATGGTGG +
Preference number: 5 (lower is better)
Translates to: ISGPWVGSDGGGCRCPSRHDLGA*GWLGWW
Trigger: CCACCATCCGAGCCAACCCAAGGCCCCGAGATCGTG...ACGGCTAGGGCAGCGGCAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355040.8
ENST00000628077.2
CDS-3UTR CAA 90 bp CCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGCCCTAGCCGTTGTCGCTCCCACGATCTCGGGGCCTaGGGTTGGCTCGGATGGTGG +
Preference number: 5 (lower is better)
Translates to: PWVGSDGGGCRCPSRCRSHDLGA*GWLGWW
Trigger: CCACCATCCGAGCCAACCCAAGGCCCCGAGATCGTG...GGAGCGACAACGGCTAGGGCAGCGGCAGCCGCCACCATCCGAGCCAACCCAAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355040.8
ENST00000628077.2
CDS-3UTR CAA 90 bp CCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGCCCTAGCCGTTGTCGCTCCCAGACCCGCGTGTCCTaGGACCTGCCCCTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: PWVGSDGGGCRCPSRCRSQTRVS*DLPLPL
Trigger: CAGAGGAAGGGGCAGGTCCAAGGACACGCGGGTCTG...GGAGCGACAACGGCTAGGGCAGCGGCAGCCGCCACCATCCGAGCCAACCCAAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355040.8
ENST00000628077.2
CDS-3UTR CAA 90 bp TCGCTCCTGCTGAAGGATGCCTCTGTTGGCCCTGGCCCGTGCCCGGGCTTCGTTGAGAGGGGGCGGTTCTaGCCCAGGACCAGACCCGCG +
Preference number: 5 (lower is better)
Translates to: SLLLKDASVGPGPCPGFVERGRF*PRTRPA
Trigger: CGCGGGTCTGGTCCTGGGCAAGAACCGCCCCCTCTC...AACGAAGCCCGGGCACGGGCCAGGGCCAACAGAGGCATCCTTCAGCAGGAGCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628077.2
CDS CCA 90 bp CACACGGTATGCCTCGCTCAGCTCCACAAAGCGGCTGTGCAGGCTTaGGTTCCCAGGGTCCCGGTCTGGGTGCAGCTGGGGTGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: HTVCLAQLHKAAVQA*VPRVPVWVQLGWGR
Trigger: CCTGCCCCACCCCAGCTGCACCCAGACCGGGACCCTGGGAACCCAAGCCTGCACAGCCGCTTTGTGGAGCTGAGCGAGGCATACCGTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537109.1
ENST00000543791.5
CDS-3UTR CAA 90 bp TGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAAGAGCCGGGAGGGAGGGTaGCGGGGCCACAGCCGGCAC +
Preference number: 5 (lower is better)
Translates to: CESLYCARFGERAVQGRKSREGG*RGHSRH
Trigger: GTGCCGGCTGTGGCCCCGCAACCCTCCCTCCCGGCT...CTTCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000321685.7
CDS-3UTR CAA 90 bp CTGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAAAGCCGGGAGGGAGGGTaGCGGGGCCACAGCCGGCAC +
Preference number: 5 (lower is better)
Translates to: LRITLLRAFRGAGRPGKESREGG*RGHSRH
Trigger: GTGCCGGCTGTGGCCCCGCAACCCTCCCTCCCGGCT...TTCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000321685.7
CDS CCA 90 bp TGGCGGCGGGCGGGCAGCTGGGAAAGGAGGCTACCAAGAGCGCATTaGACCAGGATGGGGCTAGACTTCAAGCACCCGGGGGCAGAGGGA +
Preference number: 5 (lower is better)
Translates to: WRRAGSWERRLPRAH*TRMGLDFKHPGAEG
Trigger: TCCCTCTGCCCCCGGGTGCTTGAAGTCTAGCCCCATCCTGGTCCAATGCGCTCTTGGTAGCCTCCTTTCCCAGCTGCCCGCCCGCCGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000321460.5
ENST00000321685.7
ENST00000355040.8
ENST00000536006.5
ENST00000628077.2
CDS-3UTR CAA 90 bp CGATCTCGGGGCCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGCCCTAGCCGCTACCAAGAGCGCATaGGACCAGGATGGGGCTAGA +
Preference number: 5 (lower is better)
Translates to: RSRGLGLARMVAAAAALAATKSA*DQDGAR
Trigger: TCTAGCCCCATCCTGGTCCAATGCGCTCTTGGTAGC...GGCTAGGGCAGCGGCAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAGATCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355040.8
ENST00000628077.2
CDS-3UTR CAA 90 bp CCGGGGCACGATCTCGGGGCCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGGGAGCTGCTGTGTGTTaGGTGGGCAGACTTGTCATG +
Preference number: 5 (lower is better)
Translates to: PGHDLGALGWLGWWRLPLGAAVC*VGRLVM
Trigger: CATGACAAGTCTGCCCACCAAACACACAGCAGCTCC...CAGCGGCAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAGATCGTGCCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321460.5
CDS-3UTR CAA 90 bp TTGTCGCTCCTGCTGAAGGATGCCTCTGTTGGCCCTGGCCCGTGCCCGGGCTTCCAGACCCGCGTGTCCTaGGACCTGCCCCTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: LSLLLKDASVGPGPCPGFQTRVS*DLPLPL
Trigger: CAGAGGAAGGGGCAGGTCCAAGGACACGCGGGTCTG...GAAGCCCGGGCACGGGCCAGGGCCAACAGAGGCATCCTTCAGCAGGAGCGACAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628077.2
CDS-3UTR CAA 90 bp CCCGGGGCACGATCTCGGGGCCTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGTTTGGTGGGCAGACTaGTCATGGACTGTGGTTCGT +
Preference number: 5 (lower is better)
Translates to: PGARSRGLGLARMVAAAAVWWAD*SWTVVR
Trigger: ACGAACCACAGTCCATGACAAGTCTGCCCACCAAAC...AGCGGCAGCCGCCACCATCCGAGCCAACCCAAGGCCCCGAGATCGTGCCCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321460.5
CDS-3UTR CAA 90 bp CTGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAAGAGAGGGGGCGGTTCTaGCCCAGGACCAGACCCGCG +
Preference number: 5 (lower is better)
Translates to: LRITLLRAFRGAGRPGKEERGRF*PRTRPA
Trigger: CGCGGGTCTGGTCCTGGGCAAGAACCGCCCCCTCTC...TTCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000321685.7
CDS TCA 90 bp CACCCACCAGGGCTCCAGTCATACCCAGAGGCCCTGCCTGGTCAGTaGCCCTCACTCAGGCCTGCCCACTCCTCAGAAGGCCAGAGAGCA +
Preference number: 5 (lower is better)
Translates to: HPPGLQSYPEALPGQ*PSLRPAHSSEGQRA
Trigger: TGCTCTCTGGCCTTCTGAGGAGTGGGCAGGCCTGAGTGAGGGTCACTGACCAGGCAGGGCCTCTGGGTATGACTGGAGCCCTGGTGGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537109.1
CDS-3UTR CAA 90 bp CTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGCCCTAGCCGTTGTCGCTCCTGCTACCAAGAGCGCATaGGACCAGGATGGGGCTAGA +
Preference number: 5 (lower is better)
Translates to: LGLARMVAAAAALAVVAPATKSA*DQDGAR
Trigger: TCTAGCCCCATCCTGGTCCAATGCGCTCTTGGTAGC...AGGAGCGACAACGGCTAGGGCAGCGGCAGCCGCCACCATCCGAGCCAACCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355040.8
ENST00000628077.2
CDS-3UTR CAA 90 bp TCTGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAAGCGGCTGTGCAGGCTaGGGTTCCCAGGGTCCCGGT +
Preference number: 5 (lower is better)
Translates to: SANHFIARVSGSGPSREGSGCAG*GSQGPG
Trigger: ACCGGGACCCTGGGAACCCAAGCCTGCACAGCCGCT...TCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000321685.7
CDS-3UTR CAA 90 bp GGCCCTGGCCCGTGCCCGGGCTTCGTTGTAGAAGGCTGTGATGATCCGATCCTTTCCCACCCAGGGAACTaGGGGACGGGAGAAGGAGGG +
Preference number: 5 (lower is better)
Translates to: GPGPCPGFVVEGCDDPILSHPGN*GTGEGG
Trigger: CCCTCCTTCTCCCGTCCCCAAGTTCCCTGGGTGGGA...AAGGATCGGATCATCACAGCCTTCTACAACGAAGCCCGGGCACGGGCCAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628077.2
CDS-3UTR CAA 90 bp CTGCTCACGGCTGAGCACACGGTATGCCTCGCTCAGCTCCACAAAGCGGCTGTGCAGACCCGCGTGTCCTaGGACCTGCCCCTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: LLTAEHTVCLAQLHKAAVQTRVS*DLPLPL
Trigger: CAGAGGAAGGGGCAGGTCCAAGGACACGCGGGTCTG...CACAGCCGCTTTGTGGAGCTGAGCGAGGCATACCGTGTGCTCAGCCGTGAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536006.5
CDS-3UTR CAA 90 bp CTTGGGTTGGCTCGGATGGTGGCGGCTGCCGCTGCCCTAGCCGTTGTCGCTCCTAAGGGGCCTGGCCCGTaGTTCTGCAAAGGAAGACTG +
Preference number: 5 (lower is better)
Translates to: LGLARMVAAAAALAVVAPKGPGP*FCKGRL
Trigger: CAGTCTTCCTTTGCAGAACAACGGGCCAGGCCCCTT...AGGAGCGACAACGGCTAGGGCAGCGGCAGCCGCCACCATCCGAGCCAACCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355040.8
ENST00000628077.2
CDS GCA 90 bp TTCTGCAAAGGAAGACTGAAGCAGGCCCGGAGAGGGGGCGGTTCTTaGCCAGGACCAGACCCGCGTGTCCTTGGACCTGCCCCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: FCKGRLKQARRGGGS*PGPDPRVLGPAPSS
Trigger: AGAGGAAGGGGCAGGTCCAAGGACACGCGGGTCTGGTCCTGGGCAAGAACCGCCCCCTCTCCGGGCCTGCTTCAGTCTTCCTTTGCAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321685.7
ENST00000355040.8
ENST00000536006.5
ENST00000628077.2
CDS-3UTR CAA 90 bp TGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAAGCACGATCTCGGGGCCTaGGGTTGGCTCGGATGGTGG +
Preference number: 5 (lower is better)
Translates to: CESLYCARFGERAVQGRKHDLGA*GWLGWW
Trigger: CCACCATCCGAGCCAACCCAAGGCCCCGAGATCGTG...CTTCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000321685.7
CDS-3UTR CAA 90 bp TCTGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGACACGATCTCGGGGCCTaGGGTTGGCTCGGATGGTGG +
Preference number: 5 (lower is better)
Translates to: SANHFIARVSGSGPSREGHDLGA*GWLGWW
Trigger: CCACCATCCGAGCCAACCCAAGGCCCCGAGATCGTG...TCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000321685.7
CDS-3UTR CAA 90 bp TGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAAGTCCCACCCAGGGAACTaGGGGACGGGAGAAGGAGGG +
Preference number: 5 (lower is better)
Translates to: CESLYCARFGERAVQGRKSHPGN*GTGEGG
Trigger: CCCTCCTTCTCCCGTCCCCAAGTTCCCTGGGTGGGA...CTTCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321685.7
CDS-3UTR CAA 90 bp TCTGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGACAGACCCGCGTGTCCTaGGACCTGCCCCTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: SANHFIARVSGSGPSREGQTRVS*DLPLPL
Trigger: CAGAGGAAGGGGCAGGTCCAAGGACACGCGGGTCTG...TCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321685.7
CDS-3UTR CAA 90 bp GGAGCAGGGAGCAGAATAGAGCAGGGACAGACCTGGCCCGTGCCCGGGCTTCGTAAGGGGCCTGGCCCGTaGTTCTGCAAAGGAAGACTG +
Preference number: 5 (lower is better)
Translates to: GAGSRIEQGQTWPVPGLRKGPGP*FCKGRL
Trigger: CAGTCTTCCTTTGCAGAACAACGGGCCAGGCCCCTT...ACGAAGCCCGGGCACGGGCCAGGTCTGTCCCTGCTCTATTCTGCTCCCTGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355040.8
CDS-3UTR CAA 90 bp CGGTATGCCTCGCTCAGCTCCACAAAGCGGCTGTGCAGGCTTGGGTTCCCAGGGGCTACCAAGAGCGCATaGGACCAGGATGGGGCTAGA +
Preference number: 5 (lower is better)
Translates to: RYASLSSTKRLCRLGFPGATKSA*DQDGAR
Trigger: TCTAGCCCCATCCTGGTCCAATGCGCTCTTGGTAGC...CCCTGGGAACCCAAGCCTGCACAGCCGCTTTGTGGAGCTGAGCGAGGCATACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536006.5
CDS-3UTR CAA 90 bp GACTTGGAGAAGAAAGCTCGTTTAACTTCCTCAGTGCTGGCACCAGGATGCACCAGCCGGGAGGGAGGGTaGCGGGGCCACAGCCGGCAC +
Preference number: 5 (lower is better)
Translates to: DLEKKARLTSSVLAPGCTSREGG*RGHSRH
Trigger: GTGCCGGCTGTGGCCCCGCAACCCTCCCTCCCGGCT...GGTGCATCCTGGTGCCAGCACTGAGGAAGTTAAACGAGCTTTCTTCTCCAAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536006.5
CDS-3UTR CAA 90 bp AAGGAAGCAAAGCGGGAACGCACTGCAGGCCCCATCCAGGTGAGCCCCTCAGGGCTGCGAATCACTTTATaGCGCGCGTTTCGGGGAGCG +
Preference number: 5 (lower is better)
Translates to: KEAKRERTAGPIQVSPSGLRITL*RAFRGA
Trigger: CGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAG...CCCTGAGGGGCTCACCTGGATGGGGCCTGCAGTGCGTTCCCGCTTTGCTTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000321460.5
CDS-3UTR CAA 90 bp TCGCTCCTGCTGAAGGATGCCTCTGTTGGCCCTGGCCCGTGCCCGGGCTTCGTTGCCCTCACATTCTCATaGGCGTGGATGCCAAGACCA +
Preference number: 5 (lower is better)
Translates to: SLLLKDASVGPGPCPGFVALTFS*AWMPRP
Trigger: TGGTCTTGGCATCCACGCCAATGAGAATGTGAGGGC...AACGAAGCCCGGGCACGGGCCAGGGCCAACAGAGGCATCCTTCAGCAGGAGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628077.2
CDS-3UTR CAA 90 bp GTGGAGACTTTGGGGGACTACCTGAGCGGAGCTGGTCATCATAGCTGCGGCGGCAAGGGGCCTGGCCCGTaGTTCTGCAAAGGAAGACTG +
Preference number: 5 (lower is better)
Translates to: VETLGDYLSGAGHHSCGGKGPGP*FCKGRL
Trigger: CAGTCTTCCTTTGCAGAACAACGGGCCAGGCCCCTT...GCCGCCGCAGCTATGATGACCAGCTCCGCTCAGGTAGTCCCCCAAAGTCTCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536006.5
CDS TCA 90 bp TACTGGGTCTGGACCTGTGGACAGAGTCCCAAACCTTGCAGGGGCTaGAGGAACCCAGAAGCTAGCTCTGCCCTGCCTTCTGGGCCACAC +
Preference number: 5 (lower is better)
Translates to: YWVWTCGQSPKPCRG*RNPEASSALPSGPH
Trigger: GTGTGGCCCAGAAGGCAGGGCAGAGCTAGCTTCTGGGTTCCTTCAGCCCCTGCAAGGTTTGGGACTCTGTCCACAGGTCCAGACCCAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537109.1
CDS GCA 90 bp CCAAACCTTGCAGGGGCTGAAGGAACCCAGAAGCTAGCTCTGCCCTaGCTTCTGGGCCACACCCTTCAACTCAGCCACCAGGAGCTGACA +
Preference number: 5 (lower is better)
Translates to: PNLAGAEGTQKLALP*LLGHTLQLSHQELT
Trigger: TGTCAGCTCCTGGTGGCTGAGTTGAAGGGTGTGGCCCAGAAGGCAGGGCAGAGCTAGCTTCTGGGTTCCTTCAGCCCCTGCAAGGTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537109.1
CDS-3UTR CAA 90 bp TGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAAGGCTACCAAGAGCGCATaGGACCAGGATGGGGCTAGA +
Preference number: 5 (lower is better)
Translates to: CESLYCARFGERAVQGRKATKSA*DQDGAR
Trigger: TCTAGCCCCATCCTGGTCCAATGCGCTCTTGGTAGC...CTTCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000321685.7
CDS-3UTR CAA 90 bp CTGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAAGCTACCAAGAGCGCATaGGACCAGGATGGGGCTAGA +
Preference number: 5 (lower is better)
Translates to: LRITLLRAFRGAGRPGKEATKSA*DQDGAR
Trigger: TCTAGCCCCATCCTGGTCCAATGCGCTCTTGGTAGC...TTCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000321685.7
CDS-3UTR CAA 90 bp CTGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAATGGTTCGTGGAGACTTaGGGGGACTACCTGAGCGGA +
Preference number: 5 (lower is better)
Translates to: LRITLLRAFRGAGRPGKEWFVET*GDYLSG
Trigger: TCCGCTCAGGTAGTCCCCCAAAGTCTCCACGAACCA...TTCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000321685.7
CDS-3UTR CAA 90 bp CTGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAACTGCGAATCACTTTATaGCGCGCGTTTCGGGGAGCG +
Preference number: 5 (lower is better)
Translates to: LRITLLRAFRGAGRPGKELRITL*RAFRGA
Trigger: CGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAG...TTCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000321685.7
CDS-3UTR CAA 90 bp CTCAGTGCTGGCACCAGGATGCACCCCCAACAGTTCATAATAAGTACTGGGTCTGAGAGGGGGCGGTTCTaGCCCAGGACCAGACCCGCG +
Preference number: 5 (lower is better)
Translates to: LSAGTRMHPQQFIISTGSERGRF*PRTRPA
Trigger: CGCGGGTCTGGTCCTGGGCAAGAACCGCCCCCTCTC...AGACCCAGTACTTATTATGAACTGTTGGGGGTGCATCCTGGTGCCAGCACTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000536006.5
CDS-3UTR CAA 90 bp CTGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAAAAGGGGCCTGGCCCGTaGTTCTGCAAAGGAAGACTG +
Preference number: 5 (lower is better)
Translates to: LRITLLRAFRGAGRPGKEKGPGP*FCKGRL
Trigger: CAGTCTTCCTTTGCAGAACAACGGGCCAGGCCCCTT...TTCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000321685.7
CDS GCA 90 bp AGAGCATGGACTCCTGCTTCCTCCTGTGTTCAAGCCCTCCCCACCTaGCAGCCCCCTGCATTCACCATATGCCCTGGTCCAGGTTTCTCA +
Preference number: 5 (lower is better)
Translates to: RAWTPASSCVQALPT*QPPAFTICPGPGFS
Trigger: TGAGAAACCTGGACCAGGGCATATGGTGAATGCAGGGGGCTGGCAGGTGGGGAGGGCTTGAACACAGGAGGAAGCAGGAGTCCATGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537109.1
CDS-3UTR CAA 90 bp CTGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAAGCCCTCACATTCTCATaGGCGTGGATGCCAAGACCA +
Preference number: 5 (lower is better)
Translates to: LRITLLRAFRGAGRPGKEALTFS*AWMPRP
Trigger: TGGTCTTGGCATCCACGCCAATGAGAATGTGAGGGC...TTCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321685.7
CDS-3UTR CAA 90 bp TCTGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGACCAGGAGCTGTGTGTTaGGTGGGCAGACTTGTCATG +
Preference number: 5 (lower is better)
Translates to: SANHFIARVSGSGPSREGPGAVC*VGRLVM
Trigger: CATGACAAGTCTGCCCACCAAACACACAGCTCCTGG...TCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321685.7
CDS TCA 90 bp CTGGCTTGTCTAGGGTCCAATGGCATCCGAAGTCCCTGGTCACTTTaGGGTGTGACAGCAGCTGTGGACATGGGGGTGCTCCTCCCAGAA +
Preference number: 5 (lower is better)
Translates to: LACLGSNGIRSPWSL*GVTAAVDMGVLLPE
Trigger: TTCTGGGAGGAGCACCCCCATGTCCACAGCTGCTGTCACACCTCAAAGTGACCAGGGACTTCGGATGCCATTGGACCCTAGACAAGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540945.1
CDS GCA 90 bp CAAGCAGCTCTTAGCTTGAGAGACACAAGAGTACGGGCCACGAGGTaGTGTGGAGGACTGGCTGACCACACTGGAATTCACCCACCCTCC +
Preference number: 5 (lower is better)
Translates to: QAALSLRDTRVRATR*CGGLADHTGIHPPS
Trigger: GGAGGGTGGGTGAATTCCAGTGTGGTCAGCCAGTCCTCCACAGCACCTCGTGGCCCGTACTCTTGTGTCTCTCAAGCTAAGAGCTGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537109.1
ENST00000538961.1
CDS-3UTR CAA 90 bp GGGTGCAGCTCTTTGGACTTGGAGAAGAAAGCTCGTTTAACTTCCTCAGTGCTGAGCGGCTGTGCAGGCTaGGGTTCCCAGGGTCCCGGT +
Preference number: 5 (lower is better)
Translates to: GCSSLDLEKKARLTSSVLSGCAG*GSQGPG
Trigger: ACCGGGACCCTGGGAACCCAAGCCTGCACAGCCGCT...CAGCACTGAGGAAGTTAAACGAGCTTTCTTCTCCAAGTCCAAAGAGCTGCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536006.5
CDS-3UTR CAA 90 bp CTGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAAGTTTGGTGGGCAGACTaGTCATGGACTGTGGTTCGT +
Preference number: 5 (lower is better)
Translates to: LRITLLRAFRGAGRPGKEVWWAD*SWTVVR
Trigger: ACGAACCACAGTCCATGACAAGTCTGCCCACCAAAC...TTCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000321685.7
CDS CCA 90 bp TCCAGGAGCTGCTGTGTGTTTGGTGGGCAGACTTGTCATGGACTGTaGTTCGTGGAGACTTTGGGGGACTACCTGAGCGGAGCTGGTCAT +
Preference number: 5 (lower is better)
Translates to: SRSCCVFGGQTCHGL*FVETLGDYLSGAGH
Trigger: ATGACCAGCTCCGCTCAGGTAGTCCCCCAAAGTCTCCACGAACCACAGTCCATGACAAGTCTGCCCACCAAACACACAGCAGCTCCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000538961.1
CDS CCA 90 bp GTGTCCAGGAGCTGTGTGTTTGGTGGGCAGACTTGTCATGGACTGTaGTTCGTGGAGACTTTGGGGGACTACCTGAGCGGAGCTGGTCAT +
Preference number: 5 (lower is better)
Translates to: VSRSCVFGGQTCHGL*FVETLGDYLSGAGH
Trigger: ATGACCAGCTCCGCTCAGGTAGTCCCCCAAAGTCTCCACGAACCACAGTCCATGACAAGTCTGCCCACCAAACACACAGCTCCTGGACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000321685.7
ENST00000535246.1
ENST00000537109.1
ENST00000542376.5
ENST00000543791.5
CDS-3UTR CAA 90 bp TGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAAGTCTGGGTGCAGCTCTTaGGACTTGGAGAAGAAAGCT +
Preference number: 5 (lower is better)
Translates to: CESLYCARFGERAVQGRKSGCSS*DLEKKA
Trigger: AGCTTTCTTCTCCAAGTCCAAAGAGCTGCACCCAGA...CTTCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000321685.7
CDS-3UTR CAA 90 bp TCTGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGATCTGGGTGCAGCTCTTaGGACTTGGAGAAGAAAGCT +
Preference number: 5 (lower is better)
Translates to: SANHFIARVSGSGPSREGSGCSS*DLEKKA
Trigger: AGCTTTCTTCTCCAAGTCCAAAGAGCTGCACCCAGA...TCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000321685.7
CDS-3UTR CAA 90 bp GGTGGGCAGACTTGTCATGGACTGTGGTTCGTGGAGACTTTGGGGGACTACCTGCCAGGAGCTGTGTGTTaGGTGGGCAGACTTGTCATG +
Preference number: 5 (lower is better)
Translates to: GGQTCHGLWFVETLGDYLPGAVC*VGRLVM
Trigger: CATGACAAGTCTGCCCACCAAACACACAGCTCCTGG...CAGGTAGTCCCCCAAAGTCTCCACGAACCACAGTCCATGACAAGTCTGCCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536006.5
CDS-3UTR CAA 90 bp TCATGGACTGTGGTTCGTGGAGACTTTGGGGGACTACCTGAGCGGAGCTGGTCAGTTTGGTGGGCAGACTaGTCATGGACTGTGGTTCGT +
Preference number: 5 (lower is better)
Translates to: SWTVVRGDFGGLPERSWSVWWAD*SWTVVR
Trigger: ACGAACCACAGTCCATGACAAGTCTGCCCACCAAAC...TGACCAGCTCCGCTCAGGTAGTCCCCCAAAGTCTCCACGAACCACAGTCCATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536006.5
CDS-3UTR CAA 90 bp CTGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAAGCAGTACCCCAGCACTaGTTTGTTTTGTTTGTGTTG +
Preference number: 5 (lower is better)
Translates to: LRITLLRAFRGAGRPGKEAVPQH*FVLFVL
Trigger: CAACACAAACAAAACAAACAAGTGCTGGGGTACTGC...TTCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000321685.7
CDS-3UTR CAA 90 bp TCTGCGAATCACTTTATTGCGCGCGTTTCGGGGAGCGGGCCGTCCAGGGAAGGAGCAGTACCCCAGCACTaGTTTGTTTTGTTTGTGTTG +
Preference number: 5 (lower is better)
Translates to: SANHFIARVSGSGPSREGAVPQH*FVLFVL
Trigger: CAACACAAACAAAACAAACAAGTGCTGGGGTACTGC...TCCTTCCCTGGACGGCCCGCTCCCCGAAACGCGCGCAATAAAGTGATTCGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000321685.7
CDS-3UTR CAA 90 bp GGGTGCAGCTCTTTGGACTTGGAGAAGAAAGCTCGTTTAACTTCCTCAGTGCTGTGGTTCGTGGAGACTTaGGGGGACTACCTGAGCGGA +
Preference number: 5 (lower is better)
Translates to: GCSSLDLEKKARLTSSVLWFVET*GDYLSG
Trigger: TCCGCTCAGGTAGTCCCCCAAAGTCTCCACGAACCA...CAGCACTGAGGAAGTTAAACGAGCTTTCTTCTCCAAGTCCAAAGAGCTGCACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536006.5
CDS-3UTR CAA 90 bp GAAAGCTCGTTTAACTTCCTCAGTGCTGGCACCAGGATGCACCCCCAACAGTTCTCTGGGTGCAGCTCTTaGGACTTGGAGAAGAAAGCT +
Preference number: 5 (lower is better)
Translates to: ESSFNFLSAGTRMHPQQFSGCSS*DLEKKA
Trigger: AGCTTTCTTCTCCAAGTCCAAAGAGCTGCACCCAGA...GAACTGTTGGGGGTGCATCCTGGTGCCAGCACTGAGGAAGTTAAACGAGCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536006.5
CDS GCA 90 bp GCTGTGATGATCCGATCCTTTTCATCCATGAAGTTAAGGTGCATCTaGTTCACCTTCCTGCAATGGGTCACAATTAACCCTGGGAATCCA +
Preference number: 5 (lower is better)
Translates to: AVMIRSFSSMKLRCI*FTFLQWVTINPGNP
Trigger: TGGATTCCCAGGGTTAATTGTGACCCATTGCAGGAAGGTGAAGCAGATGCACCTTAACTTCATGGATGAAAAGGATCGGATCATCACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540945.1
CDS CCA 90 bp TTTTCATCCATGAAGTTAAGGTGCATCTGCTTCACCTTCCTGCAATaGGTCACAATTAACCCTGGGAATCCAATTCCTGCTGTCCCTGAA +
Preference number: 5 (lower is better)
Translates to: FSSMKLRCICFTFLQ*VTINPGNPIPAVPE
Trigger: TTCAGGGACAGCAGGAATTGGATTCCCAGGGTTAATTGTGACCCATTGCAGGAAGGTGAAGCAGATGCACCTTAACTTCATGGATGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540945.1
CDS CCA 72 bp ACAGCCGGCACAGGCGCAGGGGCAGTAAGGGCGGCATaGCGGCGGGCGGGCAGCTGGGAAAGGAGGCTACCA +
Preference number: 6 (lower is better)
Translates to: TAGTGAGAVRAA*RRAGSWERRLP
Trigger: TGGTAGCCTCCTTTCCCAGCTGCCCGCCCGCCGCCATGCCGCCCTTACTGCCCCTGCGCCTGTGCCGGCTGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321460.5
ENST00000321685.7
ENST00000355040.8
ENST00000536006.5
ENST00000628077.2
CDS CCA 72 bp GGGGCAGTAAGGGCGGCATGGCGGCGGGCGGGCAGCTaGGAAAGGAGGCTACCAAGAGCGCATTGGACCAGG +
Preference number: 6 (lower is better)
Translates to: GAVRAAWRRAGS*ERRLPRAHWTR
Trigger: CCTGGTCCAATGCGCTCTTGGTAGCCTCCTTTCCCAGCTGCCCGCCCGCCGCCATGCCGCCCTTACTGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321460.5
ENST00000321685.7
ENST00000355040.8
ENST00000536006.5
ENST00000628077.2
CDS CAA 90 bp GCACACGGTATGCCTCGCTCAGCTCCACAAAGCGGCTGTGCAGGCTaGGGTTCCCAGGGTCCCGGTCTGGGTGCAGCTGGGGTGGGGCAG +
Preference number: 6 (lower is better)
Translates to: AHGMPRSAPQSGCAG*GSQGPGLGAAGVGQ
Trigger: CTGCCCCACCCCAGCTGCACCCAGACCGGGACCCTGGGAACCCAAGCCTGCACAGCCGCTTTGTGGAGCTGAGCGAGGCATACCGTGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537109.1
ENST00000543791.5
CDS GCA 72 bp GGAAGACTGAAGCAGGCCCGGAGAGGGGGCGGTTCTTaGCCAGGACCAGACCCGCGTGTCCTTGGACCTGCC +
Preference number: 6 (lower is better)
Translates to: GRLKQARRGGGS*PGPDPRVLGPA
Trigger: GGCAGGTCCAAGGACACGCGGGTCTGGTCCTGGGCAAGAACCGCCCCCTCTCCGGGCCTGCTTCAGTCTTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321685.7
ENST00000355040.8
ENST00000536006.5
ENST00000628077.2
CDS CAA 90 bp ATGGCGGCGGGCGGGCAGCTGGGAAAGGAGGCTACCAAGAGCGCATaGGACCAGGATGGGGCTAGACTTCAAGCACCCGGGGGCAGAGGG +
Preference number: 6 (lower is better)
Translates to: MAAGGQLGKEATKSA*DQDGARLQAPGGRG
Trigger: CCCTCTGCCCCCGGGTGCTTGAAGTCTAGCCCCATCCTGGTCCAATGCGCTCTTGGTAGCCTCCTTTCCCAGCTGCCCGCCCGCCGCCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000321460.5
ENST00000321685.7
ENST00000355040.8
ENST00000536006.5
ENST00000628077.2
CDS CAA 72 bp AGGAAGACTGAAGCAGGCCCGGAGAGGGGGCGGTTCTaGCCCAGGACCAGACCCGCGTGTCCTTGGACCTGC +
Preference number: 6 (lower is better)
Translates to: RKTEAGPERGRF*PRTRPACPWTC
Trigger: GCAGGTCCAAGGACACGCGGGTCTGGTCCTGGGCAAGAACCGCCCCCTCTCCGGGCCTGCTTCAGTCTTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321685.7
ENST00000355040.8
ENST00000536006.5
ENST00000628077.2
CDS CAA 72 bp ATGCCTCGCTCAGCTCCACAAAGCGGCTGTGCAGGCTaGGGTTCCCAGGGTCCCGGTCTGGGTGCAGCTGGG +
Preference number: 6 (lower is better)
Translates to: MPRSAPQSGCAG*GSQGPGLGAAG
Trigger: CCCAGCTGCACCCAGACCGGGACCCTGGGAACCCAAGCCTGCACAGCCGCTTTGTGGAGCTGAGCGAGGCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537109.1
ENST00000543791.5
CDS TCA 72 bp GGAAGGGGCCTGGCCCGTTGTTCTGCAAAGGAAGACTaGAGCAGGCCCGGAGAGGGGGCGGTTCTTGCCCAG +
Preference number: 6 (lower is better)
Translates to: GRGLARCSAKED*SRPGEGAVLAQ
Trigger: CTGGGCAAGAACCGCCCCCTCTCCGGGCCTGCTTCAGTCTTCCTTTGCAGAACAACGGGCCAGGCCCCTTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321685.7
ENST00000355040.8
ENST00000536006.5
ENST00000628077.2
CDS TCA 72 bp GGGCTCCAGTCATACCCAGAGGCCCTGCCTGGTCAGTaGCCCTCACTCAGGCCTGCCCACTCCTCAGAAGGC +
Preference number: 6 (lower is better)
Translates to: GLQSYPEALPGQ*PSLRPAHSSEG
Trigger: GCCTTCTGAGGAGTGGGCAGGCCTGAGTGAGGGTCACTGACCAGGCAGGGCCTCTGGGTATGACTGGAGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537109.1
CDS CAA 90 bp GTTCTGCAAAGGAAGACTGAAGCAGGCCCGGAGAGGGGGCGGTTCTaGCCCAGGACCAGACCCGCGTGTCCTTGGACCTGCCCCTTCCTC +
Preference number: 6 (lower is better)
Translates to: VLQRKTEAGPERGRF*PRTRPACPWTCPFL
Trigger: GAGGAAGGGGCAGGTCCAAGGACACGCGGGTCTGGTCCTGGGCAAGAACCGCCCCCTCTCCGGGCCTGCTTCAGTCTTCCTTTGCAGAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321685.7
ENST00000355040.8
ENST00000536006.5
ENST00000628077.2
CDS TCA 72 bp CCTCTGCCCATCACCCCGGGGAGAACAGGCATCACCTaGAGGCAATGTAGTGCAGGCCCATGCCCGCCAGCA +
Preference number: 6 (lower is better)
Translates to: PLPITPGRTGIT*RQCSAGPCPPA
Trigger: TGCTGGCGGGCATGGGCCTGCACTACATTGCCTTCAGGTGATGCCTGTTCTCCCCGGGGTGATGGGCAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537109.1
ENST00000538961.1
ENST00000542376.5
CDS GCA 72 bp GGACTGGCTGACCACACTGGAATTCACCCACCCTCCTaGCCTCTGCCCATCACCCCGGGGAGAACAGGCATC +
Preference number: 6 (lower is better)
Translates to: GLADHTGIHPPS*PLPITPGRTGI
Trigger: GATGCCTGTTCTCCCCGGGGTGATGGGCAGAGGGCAGGAGGGTGGGTGAATTCCAGTGTGGTCAGCCAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537109.1
ENST00000538961.1
ENST00000542376.5
CDS GCA 72 bp GCAGGGGCTGAAGGAACCCAGAAGCTAGCTCTGCCCTaGCTTCTGGGCCACACCCTTCAACTCAGCCACCAG +
Preference number: 6 (lower is better)
Translates to: AGAEGTQKLALP*LLGHTLQLSHQ
Trigger: CTGGTGGCTGAGTTGAAGGGTGTGGCCCAGAAGGCAGGGCAGAGCTAGCTTCTGGGTTCCTTCAGCCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537109.1
CDS GCA 72 bp TTGGGGGACTACCTGAGCGGAGCTGGTCATCATAGCTaGGGCGGCTCTGCTCACGGCTCTTTGGACTTGGAG +
Preference number: 6 (lower is better)
Translates to: LGDYLSGAGHHS*GGSAHGSLDLE
Trigger: CTCCAAGTCCAAAGAGCCGTGAGCAGAGCCGCCGCAGCTATGATGACCAGCTCCGCTCAGGTAGTCCCCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535246.1
CDS CAA 90 bp CCTGGCTTGTCTAGGGTCCAATGGCATCCGAAGTCCCTGGTCACTTaGAGGTGTGACAGCAGCTGTGGACATGGGGGTGCTCCTCCCAGA +
Preference number: 6 (lower is better)
Translates to: PGLSRVQWHPKSLVT*RCDSSCGHGGAPPR
Trigger: TCTGGGAGGAGCACCCCCATGTCCACAGCTGCTGTCACACCTCAAAGTGACCAGGGACTTCGGATGCCATTGGACCCTAGACAAGCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540945.1
CDS TCA 72 bp CTAGGGTCCAATGGCATCCGAAGTCCCTGGTCACTTTaGGGTGTGACAGCAGCTGTGGACATGGGGGTGCTC +
Preference number: 6 (lower is better)
Translates to: LGSNGIRSPWSL*GVTAAVDMGVL
Trigger: GAGCACCCCCATGTCCACAGCTGCTGTCACACCTCAAAGTGACCAGGGACTTCGGATGCCATTGGACCCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540945.1
CDS TCA 72 bp GCACCCGCCAGAGATGCTGGTCTACTCCTGGGAATTTaGAGCACACCCCCACTGGCTCAAAGTTCCTGCTCC +
Preference number: 6 (lower is better)
Translates to: APARDAGLLLGI*STPPLAQSSCS
Trigger: GGAGCAGGAACTTTGAGCCAGTGGGGGTGTGCTTCAAATTCCCAGGAGTAGACCAGCATCTCTGGCGGGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537109.1
CDS CCA 72 bp AGGGCTCAGAGTGGCCCTGGCTTGTCTAGGGTCCAATaGCATCCGAAGTCCCTGGTCACTTTGAGGTGTGAC +
Preference number: 6 (lower is better)
Translates to: RAQSGPGLSRVQ*HPKSLVTLRCD
Trigger: GTCACACCTCAAAGTGACCAGGGACTTCGGATGCCATTGGACCCTAGACAAGCCAGGGCCACTCTGAGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540945.1
CDS TCA 72 bp GAGGCTCCAGAGACCAACTTCAAGCAGCTCTTAGCTTaGGAGACACAAGAGTACGGGCCACGAGGTGCTGTG +
Preference number: 6 (lower is better)
Translates to: EAPETNFKQLLA*ETQEYGPRGAV
Trigger: CACAGCACCTCGTGGCCCGTACTCTTGTGTCTCTCAAGCTAAGAGCTGCTTGAAGTTGGTCTCTGGAGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537109.1
ENST00000538961.1
CDS GCA 72 bp CAGGCTGCTAGCAGTGGGCACTGGCCTTTAGGTATCTaGTATAGAAAATCGGCTTTGTGGCCAGGCGCGGTA +
Preference number: 6 (lower is better)
Translates to: QAASSGHWPLGI*YRKSALWPGAV
Trigger: TACCGCGCCTGGCCACAAAGCCGATTTTCTATAGCAGATACCTAAAGGCCAGTGCCCACTGCTAGCAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540945.1
CDS CCA 72 bp TGCTGTGTGTTTGGTGGGCAGACTTGTCATGGACTGTaGTTCGTGGAGACTTTGGGGGACTACCTGAGCGGA +
Preference number: 6 (lower is better)
Translates to: CCVFGGQTCHGL*FVETLGDYLSG
Trigger: TCCGCTCAGGTAGTCCCCCAAAGTCTCCACGAACCACAGTCCATGACAAGTCTGCCCACCAAACACACAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321460.5
ENST00000538961.1
CDS CCA 72 bp GATGCACCCCCAACAGTTCATAATAAGTACTGGGTCTaGACCTGTGGACAGAGTCCCAAACCTTGCAGGGGC +
Preference number: 6 (lower is better)
Translates to: DAPPTVHNKYWV*TCGQSPKPCRG
Trigger: GCCCCTGCAAGGTTTGGGACTCTGTCCACAGGTCCAGACCCAGTACTTATTATGAACTGTTGGGGGTGCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537109.1
ENST00000543685.1
CDS CCA 72 bp AAAATGTGGCACCCGCCAGAGATGCTGGTCTACTCCTaGGAATTTGAAGCACACCCCCACTGGCTCAAAGTT +
Preference number: 6 (lower is better)
Translates to: KMWHPPEMLVYS*EFEAHPHWLKV
Trigger: AACTTTGAGCCAGTGGGGGTGTGCTTCAAATTCCCAGGAGTAGACCAGCATCTCTGGCGGGTGCCACATTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537109.1
CDS CAA 72 bp TCCCAGGACAGATCTGTCTCCAGATCAGCACCCCCTTaGGAGTGTTTCAGGCATAGTGCAGGTCAGGATTTC +
Preference number: 6 (lower is better)
Translates to: SQDRSVSRSAPP*ECFRHSAGQDF
Trigger: GAAATCCTGACCTGCACTATGCCTGAAACACTCCAAAGGGGGTGCTGATCTGGAGACAGATCTGTCCTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537109.1
CDS CCA 72 bp ATGAAGTTAAGGTGCATCTGCTTCACCTTCCTGCAATaGGTCACAATTAACCCTGGGAATCCAATTCCTGCT +
Preference number: 6 (lower is better)
Translates to: MKLRCICFTFLQ*VTINPGNPIPA
Trigger: AGCAGGAATTGGATTCCCAGGGTTAATTGTGACCCATTGCAGGAAGGTGAAGCAGATGCACCTTAACTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540945.1
CDS GCA 72 bp ATCCGATCCTTTTCATCCATGAAGTTAAGGTGCATCTaGTTCACCTTCCTGCAATGGGTCACAATTAACCCT +
Preference number: 6 (lower is better)
Translates to: IRSFSSMKLRCI*FTFLQWVTINP
Trigger: AGGGTTAATTGTGACCCATTGCAGGAAGGTGAAGCAGATGCACCTTAACTTCATGGATGAAAAGGATCGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540945.1