Pregenerated sensors for DNAJC30 (Homo sapiens)
Ensembl gene IDs: ENSG00000176410Ensembl transcript IDs: ENST00000395176.3
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TACAGCGTGGGGCCTCTTTCTCAGACATCGAAAGGCCTCCTTTTCTaGACCACAGTGGAGCGATGTGCAGGTCATCGGCTAAGCTGGGCG | + |
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Preference number: 1 (lower is better) Translates to: YSVGPLSQTSKGLLF*TTVERCAGHRLSWA Trigger: CGCCCAGCTTAGCCGATGACCTGCACATCGCTCCACTGTGGTCCAGAAAAGGAGGCCTTTCGATGTCTGAGAAAGAGGCCCCACGCTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| 3UTR CCA 90 bp | CTCCAGGAACCCCCTTCACTCCTGGGCTTTCGGGACTCTACAGCGTaGGGCCTCTTTCTCAGACATCGAAAGGCCTCCTTTTCTGGACCA | + |
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Preference number: 1 (lower is better) Translates to: LQEPPSLLGFRDSTA*GLFLRHRKASFSGP Trigger: TGGTCCAGAAAAGGAGGCCTTTCGATGTCTGAGAAAGAGGCCCCACGCTGTAGAGTCCCGAAAGCCCAGGAGTGAAGGGGGTTCCTGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| 3UTR CCA 90 bp | CTCTGGAAGAAGCACCCTAGAGACTCCAGGAACCCCCTTCACTCCTaGGCTTTCGGGACTCTACAGCGTGGGGCCTCTTTCTCAGACATC | + |
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Preference number: 1 (lower is better) Translates to: LWKKHPRDSRNPLHS*AFGTLQRGASFSDI Trigger: GATGTCTGAGAAAGAGGCCCCACGCTGTAGAGTCCCGAAAGCCCAGGAGTGAAGGGGGTTCCTGGAGTCTCTAGGGTGCTTCTTCCAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| 3UTR CCA 90 bp | TTTGTCACTCTATTTCTGGGAGGGGATGGGCTGCACAGTGTGCAATaGGGCTGGCTGGTAAAGGGAGGACCAGGTGACAGCCAGCCACAC | + |
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Preference number: 1 (lower is better) Translates to: FVTLFLGGDGLHSVQ*GWLVKGGPGDSQPH Trigger: GTGTGGCTGGCTGTCACCTGGTCCTCCCTTTACCAGCCAGCCCCATTGCACACTGTGCAGCCCATCCCCTCCCAGAAATAGAGTGACAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| 3UTR CCA 90 bp | AGTGTTCCAGAAGTTGACCACATCTGGAAGCAAGAAGACAGACTCTaGAAGAAGCACCCTAGAGACTCCAGGAACCCCCTTCACTCCTGG | + |
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Preference number: 1 (lower is better) Translates to: SVPEVDHIWKQEDRL*KKHPRDSRNPLHSW Trigger: CCAGGAGTGAAGGGGGTTCCTGGAGTCTCTAGGGTGCTTCTTCCAGAGTCTGTCTTCTTGCTTCCAGATGTGGTCAACTTCTGGAACACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| 3UTR GCA 90 bp | GCCAGCCACACTGTCTCAAGGATGAACCTGGCCCTGCTAGCATTATaGTGTAATCCCTGTGGATTAGAACTATGGATAATAGGGCCGGGA | + |
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Preference number: 1 (lower is better) Translates to: ASHTVSRMNLALLAL*CNPCGLELWIIGPG Trigger: TCCCGGCCCTATTATCCATAGTTCTAATCCACAGGGATTACAGCATAATGCTAGCAGGGCCAGGTTCATCCTTGAGACAGTGTGGCTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| 3UTR GCA 90 bp | TACAGAGGCCCACCATACACATGCGGGGCAGGAGGAGATAAATCTTaGTTGGGGCTAAACAATAAAGCTACAGCGAGTGTTCCAGAAGTT | + |
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Preference number: 1 (lower is better) Translates to: YRGPPYTCGAGGDKS*LGLNNKATASVPEV Trigger: AACTTCTGGAACACTCGCTGTAGCTTTATTGTTTAGCCCCAAGCAAGATTTATCTCCTCCTGCCCCGCATGTGTATGGTGGGCCTCTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| 3UTR TCA 90 bp | CACACATTAAATATGGGCACAGGAACACTCATTCCTTATGCTCAATaGCTTTTTCTCACTCCTACATGCTATCAACATAAGGAGGAGTGC | + |
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Preference number: 1 (lower is better) Translates to: HTLNMGTGTLIPYAQ*LFLTPTCYQHKEEC Trigger: GCACTCCTCCTTATGTTGATAGCATGTAGGAGTGAGAAAAAGTCATTGAGCATAAGGAATGAGTGTTCCTGTGCCCATATTTAATGTGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| 3UTR-3UTR GCA 90 bp | CTTAGCGGGAGGAACGACAGGCTCTCCACCGATCCCATTCTTACCCTGGACCAGCACAGTGGAGCGATGTaGAGGTCATCGGCTAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: LSGRNDRLSTDPILTLDQHSGAM*RSSAKL Trigger: CAGCTTAGCCGATGACCTGCACATCGCTCCACTGTG...CTGGTCCAGGGTAAGAATGGGATCGGTGGAGAGCCTGTCGTTCCTCCCGCTAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| 3UTR-3UTR GCA 90 bp | GTGACAGCCAGCCACACTGTCTCAAGGATGAACCTGGCCCTGCTAGCATTATGCGGACCAGGTCTCACCTaGGGCTTGGGGAAGTCACAG | + |
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Preference number: 2 (lower is better) Translates to: VTASHTVSRMNLALLALCGPGLT*GLGKSQ Trigger: CTGTGACTTCCCCAAGCCGCAGGTGAGACCTGGTCC...GCATAATGCTAGCAGGGCCAGGTTCATCCTTGAGACAGTGTGGCTGGCTGTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| 3UTR-3UTR GCA 90 bp | GGCTGGCTGGTAAAGGGAGGACCAGGTGACAGCCAGCCACACTGTCTCAAGGATCAACATAAGGAGGAGTaGCCCAGGGGGCTGACCTTA | + |
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Preference number: 2 (lower is better) Translates to: GWLVKGGPGDSQPHCLKDQHKEE*PRGLTL Trigger: TAAGGTCAGCCCCCTGGGGCACTCCTCCTTATGTTG...ATCCTTGAGACAGTGTGGCTGGCTGTCACCTGGTCCTCCCTTTACCAGCCAGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| 3UTR-3UTR CCA 90 bp | CAGCCTGAGGTCGGCAGTTCGAGACCTCAGTCTGGCCAGCATGGTGAAACCCCGTTTTCTGGACCACAGTaGAGCGATGTGCAGGTCATC | + |
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Preference number: 2 (lower is better) Translates to: QPEVGSSRPQSGQHGETPFSGPQ*SDVQVI Trigger: GATGACCTGCACATCGCTCCACTGTGGTCCAGAAAA...CGGGGTTTCACCATGCTGGCCAGACTGAGGTCTCGAACTGCCGACCTCAGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| 3UTR-3UTR GCA 90 bp | TGGCTGGTAAAGGGAGGACCAGGTGACAGCCAGCCACACTGTCTCAAGGATGAAGGCCCACCATACACATaGGGGGCAGGAGGAGATAAA | + |
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Preference number: 2 (lower is better) Translates to: WLVKGGPGDSQPHCLKDEGPPYT*GAGGDK Trigger: TTTATCTCCTCCTGCCCCGCATGTGTATGGTGGGCC...TTCATCCTTGAGACAGTGTGGCTGGCTGTCACCTGGTCCTCCCTTTACCAGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| 3UTR-3UTR GCA 90 bp | CAGCCTGAGGTCGGCAGTTCGAGACCTCAGTCTGGCCAGCATGGTGAAACCCCGAATGATTTTCTCCTCTaGTGTCATGCCTACAGAGTA | + |
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Preference number: 2 (lower is better) Translates to: QPEVGSSRPQSGQHGETPNDFLL*CHAYRV Trigger: TACTCTGTAGGCATGACAGCAGAGGAGAAAATCATT...CGGGGTTTCACCATGCTGGCCAGACTGAGGTCTCGAACTGCCGACCTCAGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| 3UTR-3UTR GCA 90 bp | GGCTGGCTGGTAAAGGGAGGACCAGGTGACAGCCAGCCACACTGTCTCAAGGATGCCCTGCTAGCATTATaGTGTAATCCCTGTGGATTA | + |
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Preference number: 2 (lower is better) Translates to: GWLVKGGPGDSQPHCLKDALLAL*CNPCGL Trigger: TAATCCACAGGGATTACAGCATAATGCTAGCAGGGC...ATCCTTGAGACAGTGTGGCTGGCTGTCACCTGGTCCTCCCTTTACCAGCCAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| 3UTR-3UTR CCA 90 bp | TGGCTGGTAAAGGGAGGACCAGGTGACAGCCAGCCACACTGTCTCAAGGATGAAAAAGGCCTCCTTTTCTaGACCACAGTGGAGCGATGT | + |
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Preference number: 2 (lower is better) Translates to: WLVKGGPGDSQPHCLKDEKGLLF*TTVERC Trigger: ACATCGCTCCACTGTGGTCCAGAAAAGGAGGCCTTT...TTCATCCTTGAGACAGTGTGGCTGGCTGTCACCTGGTCCTCCCTTTACCAGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| 3UTR-3UTR CCA 90 bp | CTGGTAAAGGGAGGACCAGGTGACAGCCAGCCACACTGTCTCAAGGATGAACCTAAGGTAGACTATCAATaGCCAAGGGTTCAGAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: LVKGGPGDSQPHCLKDEPKVDYQ*PRVQRQ Trigger: CTGCCTCTGAACCCTTGGCCATTGATAGTCTACCTT...AGGTTCATCCTTGAGACAGTGTGGCTGGCTGTCACCTGGTCCTCCCTTTACCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| 3UTR-3UTR GCA 90 bp | AGTCCCGAACAGAAACACTTGAGCACCTACAATCTCACAGCCAACTCCCTGCCAGCCTTTAGCCTGCTCTaGGTAAAGAACCAAGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: SPEQKHLSTYNLTANSLPAFSLL*VKNQVS Trigger: GGAGACTTGGTTCTTTACGCAGAGCAGGCTAAAGGC...TGGCAGGGAGTTGGCTGTGAGATTGTAGGTGCTCAAGTGTTTCTGTTCGGGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| 3UTR CAA 90 bp | AGAGGCCCACCATACACATGCGGGGCAGGAGGAGATAAATCTTGCTaGGGGCTAAACAATAAAGCTACAGCGAGTGTTCCAGAAGTTGAC | + |
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Preference number: 2 (lower is better) Translates to: RGPPYTCGAGGDKSC*GLNNKATASVPEVD Trigger: GTCAACTTCTGGAACACTCGCTGTAGCTTTATTGTTTAGCCCCAAGCAAGATTTATCTCCTCCTGCCCCGCATGTGTATGGTGGGCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| 3UTR-3UTR TCA 90 bp | TGCAGAGTTTGTCACTCTATTTCTGGGAGGGGATGGGCTGCACAGTGTGCAATGGAGTGTTCCAGAAGTTaGCCACATCTGGAAGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: CRVCHSISGRGWAAQCAMECSRS*PHLEAR Trigger: TCTTGCTTCCAGATGTGGTCAACTTCTGGAACACTC...CATTGCACACTGTGCAGCCCATCCCCTCCCAGAAATAGAGTGACAAACTCTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| 3UTR-3UTR GCA 90 bp | GGCTGGCTGGTAAAGGGAGGACCAGGTGACAGCCAGCCACACTGTCTCAAGGATGGAGGAGATAAATCTTaGTTGGGGCTAAACAATAAA | + |
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Preference number: 2 (lower is better) Translates to: GWLVKGGPGDSQPHCLKDGGDKS*LGLNNK Trigger: TTTATTGTTTAGCCCCAAGCAAGATTTATCTCCTCC...ATCCTTGAGACAGTGTGGCTGGCTGTCACCTGGTCCTCCCTTTACCAGCCAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| 3UTR-3UTR GCA 90 bp | TGCAGAGTTTGTCACTCTATTTCTGGGAGGGGATGGGCTGCACAGTGTGCAATGTCTCCTCTGCTGTCATaGCTACAGAGTAACTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: CRVCHSISGRGWAAQCAMSPLLS*LQSNFS Trigger: GGAGAAGTTACTCTGTAGGCATGACAGCAGAGGAGA...CATTGCACACTGTGCAGCCCATCCCCTCCCAGAAATAGAGTGACAAACTCTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| 3UTR-3UTR CCA 90 bp | AGTCCCGAACAGAAACACTTGAGCACCTACAATCTCACAGCCAACTCCCTGCCACAAGAAGACAGACTCTaGAAGAAGCACCCTAGAGAC | + |
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Preference number: 2 (lower is better) Translates to: SPEQKHLSTYNLTANSLPQEDRL*KKHPRD Trigger: GTCTCTAGGGTGCTTCTTCCAGAGTCTGTCTTCTTG...TGGCAGGGAGTTGGCTGTGAGATTGTAGGTGCTCAAGTGTTTCTGTTCGGGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| 3UTR TCA 72 bp | TCCCAGCACTTTGGGAGGCTGGACGGGCAGACAGCCTaGGGTCGGCAGTTCGAGACCTCAGTCTGGCCAGCA | + |
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Preference number: 3 (lower is better) Translates to: SQHFGRLDGQTA*GRQFETSVWPA Trigger: TGCTGGCCAGACTGAGGTCTCGAACTGCCGACCTCAGGCTGTCTGCCCGTCCAGCCTCCCAAAGTGCTGGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| 3UTR GCA 72 bp | GAAAGGCCTCCTTTTCTGGACCACAGTGGAGCGATGTaGAGGTCATCGGCTAAGCTGGGCGGGTCGGGGAGG | + |
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Preference number: 3 (lower is better) Translates to: ERPPFLDHSGAM*RSSAKLGGSGR Trigger: CCTCCCCGACCCGCCCAGCTTAGCCGATGACCTGCACATCGCTCCACTGTGGTCCAGAAAAGGAGGCCTTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| 3UTR-3UTR CAA 90 bp | GGCTGGCTGGTAAAGGGAGGACCAGGTGACAGCCAGCCACACTGTCTCAAGGATTGCAATCCCAGCACTTaGGGAGGCTGGACGGGCAGA | + |
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Preference number: 3 (lower is better) Translates to: GWLVKGGPGDSQPHCLKDCNPST*GGWTGR Trigger: TCTGCCCGTCCAGCCTCCCAAAGTGCTGGGATTGCA...ATCCTTGAGACAGTGTGGCTGGCTGTCACCTGGTCCTCCCTTTACCAGCCAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| 3UTR CCA 72 bp | AAGCACCCTAGAGACTCCAGGAACCCCCTTCACTCCTaGGCTTTCGGGACTCTACAGCGTGGGGCCTCTTTC | + |
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Preference number: 3 (lower is better) Translates to: KHPRDSRNPLHS*AFGTLQRGASF Trigger: GAAAGAGGCCCCACGCTGTAGAGTCCCGAAAGCCCAGGAGTGAAGGGGGTTCCTGGAGTCTCTAGGGTGCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| 3UTR CCA 72 bp | GGAACGACAGGCTCTCCACCGATCCCATTCTTACCCTaGACCAGGTCTCACCTGCGGCTTGGGGAAGTCACA | + |
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Preference number: 3 (lower is better) Translates to: GTTGSPPIPFLP*TRSHLRLGEVT Trigger: TGTGACTTCCCCAAGCCGCAGGTGAGACCTGGTCCAGGGTAAGAATGGGATCGGTGGAGAGCCTGTCGTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| 3UTR CCA 72 bp | CCCCCTTCACTCCTGGGCTTTCGGGACTCTACAGCGTaGGGCCTCTTTCTCAGACATCGAAAGGCCTCCTTT | + |
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Preference number: 3 (lower is better) Translates to: PPSLLGFRDSTA*GLFLRHRKASF Trigger: AAAGGAGGCCTTTCGATGTCTGAGAAAGAGGCCCCACGCTGTAGAGTCCCGAAAGCCCAGGAGTGAAGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| 3UTR CCA 72 bp | GGGCCTCTTTCTCAGACATCGAAAGGCCTCCTTTTCTaGACCACAGTGGAGCGATGTGCAGGTCATCGGCTA | + |
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Preference number: 3 (lower is better) Translates to: GPLSQTSKGLLF*TTVERCAGHRL Trigger: TAGCCGATGACCTGCACATCGCTCCACTGTGGTCCAGAAAAGGAGGCCTTTCGATGTCTGAGAAAGAGGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| 3UTR GCA 72 bp | TTTCTCACTCCTACATGCTATCAACATAAGGAGGAGTaGCCCAGGGGGCTGACCTTAGCGGGAGGAACGACA | + |
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Preference number: 3 (lower is better) Translates to: FLTPTCYQHKEE*PRGLTLAGGTT Trigger: TGTCGTTCCTCCCGCTAAGGTCAGCCCCCTGGGGCACTCCTCCTTATGTTGATAGCATGTAGGAGTGAGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| 3UTR-3UTR CAA 90 bp | GGCTGGCTGGTAAAGGGAGGACCAGGTGACAGCCAGCCACACTGTCTCAAGGATCCCAGACCTTTTCTTTaGGTAGTCAACAATTGGTCA | + |
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Preference number: 3 (lower is better) Translates to: GWLVKGGPGDSQPHCLKDPRPFL*VVNNWS Trigger: TGACCAATTGTTGACTACCAAAAGAAAAGGTCTGGG...ATCCTTGAGACAGTGTGGCTGGCTGTCACCTGGTCCTCCCTTTACCAGCCAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| 3UTR GCA 72 bp | TGCACATTTCAAGGTTACAGAGGCCCACCATACACATaGGGGGCAGGAGGAGATAAATCTTGCTTGGGGCTA | + |
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Preference number: 3 (lower is better) Translates to: CTFQGYRGPPYT*GAGGDKSCLGL Trigger: TAGCCCCAAGCAAGATTTATCTCCTCCTGCCCCGCATGTGTATGGTGGGCCTCTGTAACCTTGAAATGTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| 3UTR CCA 72 bp | GAAGTTGACCACATCTGGAAGCAAGAAGACAGACTCTaGAAGAAGCACCCTAGAGACTCCAGGAACCCCCTT | + |
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Preference number: 3 (lower is better) Translates to: EVDHIWKQEDRL*KKHPRDSRNPL Trigger: AAGGGGGTTCCTGGAGTCTCTAGGGTGCTTCTTCCAGAGTCTGTCTTCTTGCTTCCAGATGTGGTCAACTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| 3UTR GCA 72 bp | CCACCATACACATGCGGGGCAGGAGGAGATAAATCTTaGTTGGGGCTAAACAATAAAGCTACAGCGAGTGTT | + |
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Preference number: 3 (lower is better) Translates to: PPYTCGAGGDKS*LGLNNKATASV Trigger: AACACTCGCTGTAGCTTTATTGTTTAGCCCCAAGCAAGATTTATCTCCTCCTGCCCCGCATGTGTATGGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| 3UTR-3UTR CAA 90 bp | AGCCACACTGTCTCAAGGATGAACCTGGCCCTGCTAGCATTATGCTGTAATCCCGGAGATAAATCTTGCTaGGGGCTAAACAATAAAGCT | + |
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Preference number: 3 (lower is better) Translates to: SHTVSRMNLALLALCCNPGDKSC*GLNNKA Trigger: AGCTTTATTGTTTAGCCCCAAGCAAGATTTATCTCC...GGGATTACAGCATAATGCTAGCAGGGCCAGGTTCATCCTTGAGACAGTGTGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| 3UTR TCA 72 bp | TTTACAGATTCACACTCAGTCCCGAACAGAAACACTTaGGCACCTACAATCTCACAGCCAACTCCCTGCCAA | + |
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Preference number: 3 (lower is better) Translates to: FTDSHSVPNRNT*APTISQPTPCQ Trigger: TTGGCAGGGAGTTGGCTGTGAGATTGTAGGTGCTCAAGTGTTTCTGTTCGGGACTGAGTGTGAATCTGTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| 3UTR TCA 72 bp | TTTACACAATACATTGAGTGCAGGAATGGCACGCAATaGTTGCACTCAGTAATATACCAAACCACTCCTGGC | + |
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Preference number: 3 (lower is better) Translates to: FTQYIECRNGTQ*LHSVIYQTTPG Trigger: GCCAGGAGTGGTTTGGTATATTACTGAGTGCAATCATTGCGTGCCATTCCTGCACTCAATGTATTGTGTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| 3UTR GCA 72 bp | ACTGTCTCAAGGATGAACCTGGCCCTGCTAGCATTATaGTGTAATCCCTGTGGATTAGAACTATGGATAATA | + |
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Preference number: 3 (lower is better) Translates to: TVSRMNLALLAL*CNPCGLELWII Trigger: TATTATCCATAGTTCTAATCCACAGGGATTACAGCATAATGCTAGCAGGGCCAGGTTCATCCTTGAGACAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| CDS-3UTR TCA 90 bp | ACAGACTCTGGAAGAAGCACCCTAGAGACTCCAGGAACCCCCTTCACTCCTGGGCCTGGGAGATGCGCGTaGAGCGCTCGGCGGCCTCCG | + |
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Preference number: 4 (lower is better) Translates to: TDSGRSTLETPGTPFTPGPGRCA*SARRPP Trigger: CGGAGGCCGCCGAGCGCTTCACGCGCATCTCCCAGG...CCCAGGAGTGAAGGGGGTTCCTGGAGTCTCTAGGGTGCTTCTTCCAGAGTCTGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| CDS-3UTR CCA 90 bp | GTGGAGCGATGTGCAGGTCATCGGCTAAGCTGGGCGGGTCGGGGAGGGCAGGGGATCCCATTCTTACCCTaGACCAGGTCTCACCTGCGG | + |
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Preference number: 4 (lower is better) Translates to: VERCAGHRLSWAGRGGQGIPFLP*TRSHLR Trigger: CCGCAGGTGAGACCTGGTCCAGGGTAAGAATGGGAT...CCCCTGCCCTCCCCGACCCGCCCAGCTTAGCCGATGACCTGCACATCGCTCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| CDS-3UTR CCA 90 bp | GGCTTTCGGGACTCTACAGCGTGGGGCCTCTTTCTCAGACATCGAAAGGCCTCCGGGCCTGCGTGGCTGTaGAGGGGACGCCGAGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: GFRDSTAWGLFLRHRKASGPAWL*RGRRAD Trigger: ATCTGCTCGGCGTCCCCTCCACAGCCACGCAGGCCC...GGAGGCCTTTCGATGTCTGAGAAAGAGGCCCCACGCTGTAGAGTCCCGAAAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| CDS-3UTR CCA 90 bp | TGGCTGGTAAAGGGAGGACCAGGTGACAGCCAGCCACACTGTCTCAAGGATGAAGCCCGAGAACCGTCGTaGGTCCGAGAGGTGGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: WLVKGGPGDSQPHCLKDEAREPS*VREVGG Trigger: GCCGCCCACCTCTCGGACCCACGACGGTTCTCGGGC...TTCATCCTTGAGACAGTGTGGCTGGCTGTCACCTGGTCCTCCCTTTACCAGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| CDS-3UTR TCA 90 bp | GGCTGGCTGGTAAAGGGAGGACCAGGTGACAGCCAGCCACACTGTCTCAAGGATGGTAGTAAGCCGCCTTaGTTTGGGCCTGCGTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: GWLVKGGPGDSQPHCLKDGSKPP*FGPAWL Trigger: CAGCCACGCAGGCCCAAATCAAGGCGGCTTACTACC...ATCCTTGAGACAGTGTGGCTGGCTGTCACCTGGTCCTCCCTTTACCAGCCAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| CDS-3UTR GCA 90 bp | CTTAGCGGGAGGAACGACAGGCTCTCCACCGATCCCATTCTTACCCTGGACCAGGGACCAGGTCTCACCTaGGGCTTGGGGAAGTCACAG | + |
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Preference number: 4 (lower is better) Translates to: LSGRNDRLSTDPILTLDQGPGLT*GLGKSQ Trigger: CTGTGACTTCCCCAAGCCGCAGGTGAGACCTGGTCC...CTGGTCCAGGGTAAGAATGGGATCGGTGGAGAGCCTGTCGTTCCTCCCGCTAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| CDS-3UTR GCA 90 bp | CTTAGCGGGAGGAACGACAGGCTCTCCACCGATCCCATTCTTACCCTGGACCAGGATCATACAGCGCCGTaGGCGAATACGAGCAGTCGC | + |
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Preference number: 4 (lower is better) Translates to: LSGRNDRLSTDPILTLDQDHTAP*ANTSSR Trigger: GCGACTGCTCGTATTCGCGCACGGCGCTGTATGATC...CTGGTCCAGGGTAAGAATGGGATCGGTGGAGAGCCTGTCGTTCCTCCCGCTAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| CDS-3UTR GCA 90 bp | AGCCACACTGTCTCAAGGATGAACCTGGCCCTGCTAGCATTATGCTGTAATCCCCCGCGCTCCCGGAGTTaGGGTCCGGGTGGTAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: SHTVSRMNLALLALCCNPPRSRS*GPGGRE Trigger: TTCTCTACCACCCGGACCGCAACTCCGGGAGCGCGG...GGGATTACAGCATAATGCTAGCAGGGCCAGGTTCATCCTTGAGACAGTGTGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| CDS-3UTR GCA 90 bp | AGCCACACTGTCTCAAGGATGAACCTGGCCCTGCTAGCATTATGCTGTAATCCCGACGGAGGGTGGCACTaGCCAGCACCACGTAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: SHTVSRMNLALLALCCNPDGGWH*PAPRRP Trigger: AGGCCTACGTGGTGCTGGGCAGTGCCACCCTCCGTC...GGGATTACAGCATAATGCTAGCAGGGCCAGGTTCATCCTTGAGACAGTGTGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| CDS-3UTR GCA 90 bp | AGCCACACTGTCTCAAGGATGAACCTGGCCCTGCTAGCATTATGCTGTAATCCCGATACTCCTGCCGTTTaGGAAGGGCCTCCCGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SHTVSRMNLALLALCCNPDTPAV*EGPPAG Trigger: CCCGGCGGGAGGCCCTTCGCAAACGGCAGGAGTATC...GGGATTACAGCATAATGCTAGCAGGGCCAGGTTCATCCTTGAGACAGTGTGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395176.3 |
||
| CDS-3UTR GCA 90 bp | ACAGACTCTGGAAGAAGCACCCTAGAGACTCCAGGAACCCCCTTCACTCCTGGGCCGGGAGGTGGAGGTTaGAGTGAGCTAAGATCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TDSGRSTLETPGTPFTPGPGGGG*SELRSH Trigger: GTGCGATCTTAGCTCACTGCAACCTCCACCTCCCGG...CCCAGGAGTGAAGGGGGTTCCTGGAGTCTCTAGGGTGCTTCTTCCAGAGTCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395176.3 |
||
| CDS-3UTR CCA 90 bp | ACCCCCTTCACTCCTGGGCTTTCGGGACTCTACAGCGTGGGGCCTCTTTCTCAGACTAGCCAGGTGTGGTaGGAGCCTGTAATCCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TPFTPGLSGLYSVGPLSQTSQVW*EPVIPV Trigger: AACTGGGATTACAGGCTCCCACCACACCTGGCTAGT...CTGAGAAAGAGGCCCCACGCTGTAGAGTCCCGAAAGCCCAGGAGTGAAGGGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000395176.3 |
||
| CDS-3UTR CCA 90 bp | GGGCCTCTTTCTCAGACATCGAAAGGCCTCCTTTTCTGGACCACAGTGGAGCGAGCAATCCCAGCACTTTaGGAGGCTGGACGGGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GPLSQTSKGLLFWTTVERAIPAL*EAGRAD Trigger: GTCTGCCCGTCCAGCCTCCCAAAGTGCTGGGATTGC...TCGCTCCACTGTGGTCCAGAAAAGGAGGCCTTTCGATGTCTGAGAAAGAGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395176.3 |
||
| CDS-3UTR GCA 90 bp | AGCCTGCTCTGCGTAAAGAACCAAGTCTCCACCATGAACACCAAGCCACCAACTGCCTTGATTTGGGCCTaGGTGGCTGTGGAGGGGACG | + |
|
Preference number: 4 (lower is better) Translates to: SLLCVKNQVSTMNTKPPTALIWA*VAVEGT Trigger: CGTCCCCTCCACAGCCACGCAGGCCCAAATCAAGGC...AGTTGGTGGCTTGGTGTTCATGGTGGAGACTTGGTTCTTTACGCAGAGCAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395176.3 |
||
| CDS-3UTR GCA 90 bp | TGCAGAGTTTGTCACTCTATTTCTGGGAGGGGATGGGCTGCACAGTGTGCAATGGGCCGCGATCATACTTaGGACGGAGGGTGGCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: CRVCHSISGRGWAAQCAMGRDHT*DGGWHC Trigger: GCAGTGCCACCCTCCGTCGCAAGTATGATCGCGGCC...CATTGCACACTGTGCAGCCCATCCCCTCCCAGAAATAGAGTGACAAACTCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395176.3 |
||
| CDS-3UTR GCA 90 bp | ACAGACTCTGGAAGAAGCACCCTAGAGACTCCAGGAACCCCCTTCACTCCTGGGCAACATAAGGAGGAGTaGCCCAGGGGGCTGACCTTA | + |
|
Preference number: 4 (lower is better) Translates to: TDSGRSTLETPGTPFTPGQHKEE*PRGLTL Trigger: TAAGGTCAGCCCCCTGGGGCACTCCTCCTTATGTTG...CCCAGGAGTGAAGGGGGTTCCTGGAGTCTCTAGGGTGCTTCTTCCAGAGTCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000395176.3 |
||
| CDS-3UTR CCA 90 bp | TGCAGAGTTTGTCACTCTATTTCTGGGAGGGGATGGGCTGCACAGTGTGCAATGACTTGCGACGGAGGGTaGCACTGCCCAGCACCACGT | + |
|
Preference number: 4 (lower is better) Translates to: CRVCHSISGRGWAAQCAMTCDGG*HCPAPR Trigger: ACGTGGTGCTGGGCAGTGCCACCCTCCGTCGCAAGT...CATTGCACACTGTGCAGCCCATCCCCTCCCAGAAATAGAGTGACAAACTCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395176.3 |
||
| CDS-3UTR TCA 90 bp | TGCAGAGTTTGTCACTCTATTTCTGGGAGGGGATGGGCTGCACAGTGTGCAATGGCAGGTCCTCGTCGCTaGGTAGGCCGCGATCATACT | + |
|
Preference number: 4 (lower is better) Translates to: CRVCHSISGRGWAAQCAMAGPRR*VGRDHT Trigger: AGTATGATCGCGGCCTACTCAGCGACGAGGACCTGC...CATTGCACACTGTGCAGCCCATCCCCTCCCAGAAATAGAGTGACAAACTCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395176.3 |
||
| CDS-3UTR TCA 90 bp | GGGCCTCTTTCTCAGACATCGAAAGGCCTCCTTTTCTGGACCACAGTGGAGCGAAGAAGGCGTCAAAGTTaGACATCGTGCGGTTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GPLSQTSKGLLFWTTVERRRRQS*TSCGWR Trigger: GCGCCAACCGCACGATGTTCAACTTTGACGCCTTCT...TCGCTCCACTGTGGTCCAGAAAAGGAGGCCTTTCGATGTCTGAGAAAGAGGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395176.3 |
||
| CDS-3UTR GCA 90 bp | CTGGTAAAGGGAGGACCAGGTGACAGCCAGCCACACTGTCTCAAGGATGAACCTTCACAGCCAACTCCCTaGCAACGTCCAGTGACTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LVKGGPGDSQPHCLKDEPSQPTP*QRPVTH Trigger: GTGAGTCACTGGACGTTGGCAGGGAGTTGGCTGTGA...AGGTTCATCCTTGAGACAGTGTGGCTGGCTGTCACCTGGTCCTCCCTTTACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395176.3 |
||
| CDS-3UTR CCA 90 bp | GTGACAGCCAGCCACACTGTCTCAAGGATGAACCTGGCCCTGCTAGCATTATGCAGCGGAGGCCTTTCATaGACCGATACTCCTGCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: VTASHTVSRMNLALLALCSGGLS*TDTPAV Trigger: AACGGCAGGAGTATCGGTCCATGAAAGGCCTCCGCT...GCATAATGCTAGCAGGGCCAGGTTCATCCTTGAGACAGTGTGGCTGGCTGTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395176.3 |
||
| CDS-3UTR CCA 90 bp | CTTAGCGGGAGGAACGACAGGCTCTCCACCGATCCCATTCTTACCCTGGACCAGAAAGGCCTCCTTTTCTaGACCACAGTGGAGCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: LSGRNDRLSTDPILTLDQKGLLF*TTVERC Trigger: ACATCGCTCCACTGTGGTCCAGAAAAGGAGGCCTTT...CTGGTCCAGGGTAAGAATGGGATCGGTGGAGAGCCTGTCGTTCCTCCCGCTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395176.3 |
||
| CDS-3UTR CCA 90 bp | CTGGTAAAGGGAGGACCAGGTGACAGCCAGCCACACTGTCTCAAGGATGAACCTCGGGACTCTACAGCGTaGGGCCTCTTTCTCAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: LVKGGPGDSQPHCLKDEPRDSTA*GLFLRH Trigger: ATGTCTGAGAAAGAGGCCCCACGCTGTAGAGTCCCG...AGGTTCATCCTTGAGACAGTGTGGCTGGCTGTCACCTGGTCCTCCCTTTACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395176.3 |
||
| CDS-3UTR CCA 90 bp | CTGGTAAAGGGAGGACCAGGTGACAGCCAGCCACACTGTCTCAAGGATGAACCTCTGCACAGTGTGCAATaGGGCTGGCTGGTAAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LVKGGPGDSQPHCLKDEPLHSVQ*GWLVKG Trigger: TCCCTTTACCAGCCAGCCCCATTGCACACTGTGCAG...AGGTTCATCCTTGAGACAGTGTGGCTGGCTGTCACCTGGTCCTCCCTTTACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395176.3 |
||
| CDS-3UTR TCA 90 bp | GGCTTTCGGGACTCTACAGCGTGGGGCCTCTTTCTCAGACATCGAAAGGCCTCCGAGTGTTCCAGAAGTTaGCCACATCTGGAAGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GFRDSTAWGLFLRHRKASECSRS*PHLEAR Trigger: TCTTGCTTCCAGATGTGGTCAACTTCTGGAACACTC...GGAGGCCTTTCGATGTCTGAGAAAGAGGCCCCACGCTGTAGAGTCCCGAAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395176.3 |
||
| CDS-3UTR TCA 90 bp | TGCAGAGTTTGTCACTCTATTTCTGGGAGGGGATGGGCTGCACAGTGTGCAATGAAAGGGAGGACCAGGTaGCAGCCAGCCACACTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CRVCHSISGRGWAAQCAMKGRTR*QPATLS Trigger: AGACAGTGTGGCTGGCTGTCACCTGGTCCTCCCTTT...CATTGCACACTGTGCAGCCCATCCCCTCCCAGAAATAGAGTGACAAACTCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395176.3 |
||
| CDS-3UTR TCA 90 bp | GGGCCTCTTTCTCAGACATCGAAAGGCCTCCTTTTCTGGACCACAGTGGAGCGACCTGCCAACGTCCAGTaGCTCACAGTTAAGAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GPLSQTSKGLLFWTTVERPANVQ*LTVKRA Trigger: AGCTCTCTTAACTGTGAGTCACTGGACGTTGGCAGG...TCGCTCCACTGTGGTCCAGAAAAGGAGGCCTTTCGATGTCTGAGAAAGAGGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395176.3 |
||
| CDS-3UTR GCA 90 bp | AGCCACACTGTCTCAAGGATGAACCTGGCCCTGCTAGCATTATGCTGTAATCCCATGGACCGATACTCCTaGCGTTTGCGAAGGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SHTVSRMNLALLALCCNPMDRYS*RLRRAS Trigger: GGAGGCCCTTCGCAAACGGCAGGAGTATCGGTCCAT...GGGATTACAGCATAATGCTAGCAGGGCCAGGTTCATCCTTGAGACAGTGTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395176.3 |
||
| CDS-3UTR CCA 90 bp | GGCTGGCTGGTAAAGGGAGGACCAGGTGACAGCCAGCCACACTGTCTCAAGGATCAAGAAGACAGACTCTaGAAGAAGCACCCTAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GWLVKGGPGDSQPHCLKDQEDRL*KKHPRD Trigger: GTCTCTAGGGTGCTTCTTCCAGAGTCTGTCTTCTTG...ATCCTTGAGACAGTGTGGCTGGCTGTCACCTGGTCCTCCCTTTACCAGCCAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395176.3 |
||
| CDS-3UTR CCA 90 bp | CTGGTAAAGGGAGGACCAGGTGACAGCCAGCCACACTGTCTCAAGGATGAACCTGTCTCACCTGCGGCTTaGGGAAGTCACAGAAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: LVKGGPGDSQPHCLKDEPVSPAA*GSHRKT Trigger: TGTCTTTCTGTGACTTCCCCAAGCCGCAGGTGAGAC...AGGTTCATCCTTGAGACAGTGTGGCTGGCTGTCACCTGGTCCTCCCTTTACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395176.3 |
||
| CDS-3UTR CCA 90 bp | ACCCCCTTCACTCCTGGGCTTTCGGGACTCTACAGCGTGGGGCCTCTTTCTCAGTGTGGATTAGAACTATaGATAATAGGGCCGGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TPFTPGLSGLYSVGPLSQCGLEL*IIGPGA Trigger: TGCTCCCGGCCCTATTATCCATAGTTCTAATCCACA...CTGAGAAAGAGGCCCCACGCTGTAGAGTCCCGAAAGCCCAGGAGTGAAGGGGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000395176.3 |
||
| CDS-3UTR CCA 90 bp | CTGGTAAAGGGAGGACCAGGTGACAGCCAGCCACACTGTCTCAAGGATGAACCTATTTCTGGGAGGGGATaGGCTGCACAGTGTGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: LVKGGPGDSQPHCLKDEPISGRG*AAQCAM Trigger: CATTGCACACTGTGCAGCCCATCCCCTCCCAGAAAT...AGGTTCATCCTTGAGACAGTGTGGCTGGCTGTCACCTGGTCCTCCCTTTACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395176.3 |
||
| CDS-3UTR TCA 90 bp | CCTTCACTCCTGGGCTTTCGGGACTCTACAGCGTGGGGCCTCTTTCTCAGACATCCGAACAGAAACACTTaGGCACCTACAATCTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: PSLLGFRDSTAWGLFLRHPNRNT*APTISQ Trigger: CTGTGAGATTGTAGGTGCTCAAGTGTTTCTGTTCGG...ATGTCTGAGAAAGAGGCCCCACGCTGTAGAGTCCCGAAAGCCCAGGAGTGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395176.3 |
||
| CDS-3UTR GCA 90 bp | TGGACCACAGTGGAGCGATGTGCAGGTCATCGGCTAAGCTGGGCGGGTCGGGGAGGAGGAGATAAATCTTaGTTGGGGCTAAACAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: WTTVERCAGHRLSWAGRGGGDKS*LGLNNK Trigger: TTTATTGTTTAGCCCCAAGCAAGATTTATCTCCTCC...TCCCCGACCCGCCCAGCTTAGCCGATGACCTGCACATCGCTCCACTGTGGTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395176.3 |
||
| CDS-3UTR GCA 90 bp | TGCAGAGTTTGTCACTCTATTTCTGGGAGGGGATGGGCTGCACAGTGTGCAATGGGCCCACCATACACATaGGGGGCAGGAGGAGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: CRVCHSISGRGWAAQCAMGPPYT*GAGGDK Trigger: TTTATCTCCTCCTGCCCCGCATGTGTATGGTGGGCC...CATTGCACACTGTGCAGCCCATCCCCTCCCAGAAATAGAGTGACAAACTCTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000395176.3 |
||
| CDS-3UTR GCA 90 bp | GGCTTTCGGGACTCTACAGCGTGGGGCCTCTTTCTCAGACATCGAAAGGCCTCCGCCCTGCTAGCATTATaGTGTAATCCCTGTGGATTA | + |
|
Preference number: 4 (lower is better) Translates to: GFRDSTAWGLFLRHRKASALLAL*CNPCGL Trigger: TAATCCACAGGGATTACAGCATAATGCTAGCAGGGC...GGAGGCCTTTCGATGTCTGAGAAAGAGGCCCCACGCTGTAGAGTCCCGAAAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395176.3 |
||
| CDS-3UTR CCA 90 bp | TGCAGAGTTTGTCACTCTATTTCTGGGAGGGGATGGGCTGCACAGTGTGCAATGGGGTGCAGAATTTTGTaGAAAGCCACGGGCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CRVCHSISGRGWAAQCAMGCRIL*KATGLQ Trigger: CTGCAGGCCCGTGGCTTTCCACAAAATTCTGCACCC...CATTGCACACTGTGCAGCCCATCCCCTCCCAGAAATAGAGTGACAAACTCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000395176.3 |
||
| CDS-3UTR CCA 90 bp | GGGCCTCTTTCTCAGACATCGAAAGGCCTCCTTTTCTGGACCACAGTGGAGCGATTTTCTGGACCACAGTaGAGCGATGTGCAGGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: GPLSQTSKGLLFWTTVERFSGPQ*SDVQVI Trigger: GATGACCTGCACATCGCTCCACTGTGGTCCAGAAAA...TCGCTCCACTGTGGTCCAGAAAAGGAGGCCTTTCGATGTCTGAGAAAGAGGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395176.3 |
||
| CDS-3UTR CCA 90 bp | AGCCTGCTCTGCGTAAAGAACCAAGTCTCCACCATGAACACCAAGCCACCAACTAACCCCCTTCACTCCTaGGCTTTCGGGACTCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: SLLCVKNQVSTMNTKPPTNPLHS*AFGTLQ Trigger: CTGTAGAGTCCCGAAAGCCCAGGAGTGAAGGGGGTT...AGTTGGTGGCTTGGTGTTCATGGTGGAGACTTGGTTCTTTACGCAGAGCAGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395176.3 |
||
| CDS-3UTR CCA 90 bp | AGCCACACTGTCTCAAGGATGAACCTGGCCCTGCTAGCATTATGCTGTAATCCCAGTGTGCAATGGGGCTaGCTGGTAAAGGGAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: SHTVSRMNLALLALCCNPSVQWG*LVKGGP Trigger: TGGTCCTCCCTTTACCAGCCAGCCCCATTGCACACT...GGGATTACAGCATAATGCTAGCAGGGCCAGGTTCATCCTTGAGACAGTGTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395176.3 |
||
| CDS-3UTR CCA 90 bp | TGGCTGGTAAAGGGAGGACCAGGTGACAGCCAGCCACACTGTCTCAAGGATGAATTGTCACTCTATTTCTaGGAGGGGATGGGCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: WLVKGGPGDSQPHCLKDELSLYF*EGMGCT Trigger: TGTGCAGCCCATCCCCTCCCAGAAATAGAGTGACAA...TTCATCCTTGAGACAGTGTGGCTGGCTGTCACCTGGTCCTCCCTTTACCAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395176.3 |
||
| CDS-3UTR TCA 90 bp | AGCCTGCTCTGCGTAAAGAACCAAGTCTCCACCATGAACACCAAGCCACCAACTACCAAGTCTCCACCATaGACACCAAGCCACCAACTC | + |
|
Preference number: 4 (lower is better) Translates to: SLLCVKNQVSTMNTKPPTTKSPP*TPSHQL Trigger: GAGTTGGTGGCTTGGTGTTCATGGTGGAGACTTGGT...AGTTGGTGGCTTGGTGTTCATGGTGGAGACTTGGTTCTTTACGCAGAGCAGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395176.3 |
||
| CDS-3UTR CCA 90 bp | GGCTTTCGGGACTCTACAGCGTGGGGCCTCTTTCTCAGACATCGAAAGGCCTCCGGCACAATGATGGAATaGTTTTCAAGAGGCCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GFRDSTAWGLFLRHRKASGTMME*FSRGQV Trigger: TACTTGGCCTCTTGAAAACCATTCCATCATTGTGCC...GGAGGCCTTTCGATGTCTGAGAAAGAGGCCCCACGCTGTAGAGTCCCGAAAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395176.3 |
||
| CDS-3UTR TCA 90 bp | CTTAGCGGGAGGAACGACAGGCTCTCCACCGATCCCATTCTTACCCTGGACCAGATGGATAATAAAGCATaGCAGACCTCAAGATGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LSGRNDRLSTDPILTLDQMDNKA*QTSRCQ Trigger: TTGGCATCTTGAGGTCTGTCATGCTTTATTATCCAT...CTGGTCCAGGGTAAGAATGGGATCGGTGGAGAGCCTGTCGTTCCTCCCGCTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395176.3 |
||
| CDS-3UTR TCA 90 bp | ACAGACTCTGGAAGAAGCACCCTAGAGACTCCAGGAACCCCCTTCACTCCTGGGGCTAGATTGGCACAATaGTGGAATGGTTTTCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TDSGRSTLETPGTPFTPGARLAQ*WNGFQE Trigger: CTCTTGAAAACCATTCCATCATTGTGCCAATCTAGC...CCCAGGAGTGAAGGGGGTTCCTGGAGTCTCTAGGGTGCTTCTTCCAGAGTCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000395176.3 |
||
| CDS-3UTR GCA 90 bp | TCTTTCTCAGACATCGAAAGGCCTCCTTTTCTGGACCACAGTGGAGCGATGTGCGCCTTTAGCCTGCTCTaGGTAAAGAACCAAGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SFSDIERPPFLDHSGAMCAFSLL*VKNQVS Trigger: GGAGACTTGGTTCTTTACGCAGAGCAGGCTAAAGGC...GCACATCGCTCCACTGTGGTCCAGAAAAGGAGGCCTTTCGATGTCTGAGAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395176.3 |
||
| CDS-3UTR GCA 90 bp | AGTCCCGAACAGAAACACTTGAGCACCTACAATCTCACAGCCAACTCCCTGCCATCTCCTCTGCTGTCATaGCTACAGAGTAACTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPEQKHLSTYNLTANSLPSPLLS*LQSNFS Trigger: GGAGAAGTTACTCTGTAGGCATGACAGCAGAGGAGA...TGGCAGGGAGTTGGCTGTGAGATTGTAGGTGCTCAAGTGTTTCTGTTCGGGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395176.3 |
||
| CDS-3UTR GCA 90 bp | ACAGACTCTGGAAGAAGCACCCTAGAGACTCCAGGAACCCCCTTCACTCCTGGGAATGATTTTCTCCTCTaGTGTCATGCCTACAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: TDSGRSTLETPGTPFTPGNDFLL*CHAYRV Trigger: TACTCTGTAGGCATGACAGCAGAGGAGAAAATCATT...CCCAGGAGTGAAGGGGGTTCCTGGAGTCTCTAGGGTGCTTCTTCCAGAGTCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000395176.3 |
||
| CDS-3UTR CCA 90 bp | TGCAGAGTTTGTCACTCTATTTCTGGGAGGGGATGGGCTGCACAGTGTGCAATGAAGGTAGACTATCAATaGCCAAGGGTTCAGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CRVCHSISGRGWAAQCAMKVDYQ*PRVQRQ Trigger: CTGCCTCTGAACCCTTGGCCATTGATAGTCTACCTT...CATTGCACACTGTGCAGCCCATCCCCTCCCAGAAATAGAGTGACAAACTCTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395176.3 |
||
| 3UTR CAA 72 bp | CCATACACATGCGGGGCAGGAGGAGATAAATCTTGCTaGGGGCTAAACAATAAAGCTACAGCGAGTGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PYTCGAGGDKSC*GLNNKATASVP Trigger: TGGAACACTCGCTGTAGCTTTATTGTTTAGCCCCAAGCAAGATTTATCTCCTCCTGCCCCGCATGTGTATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395176.3 |
||
| CDS-3UTR TCA 90 bp | AGTCCCGAACAGAAACACTTGAGCACCTACAATCTCACAGCCAACTCCCTGCCAAGGAATGGCACGCAATaGTTGCACTCAGTAATATAC | + |
|
Preference number: 4 (lower is better) Translates to: SPEQKHLSTYNLTANSLPRNGTQ*LHSVIY Trigger: GTATATTACTGAGTGCAATCATTGCGTGCCATTCCT...TGGCAGGGAGTTGGCTGTGAGATTGTAGGTGCTCAAGTGTTTCTGTTCGGGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395176.3 |
||
| CDS-3UTR TCA 90 bp | AGCCACACTGTCTCAAGGATGAACCTGGCCCTGCTAGCATTATGCTGTAATCCCTTTTACACAATACATTaGGTGCAGGAATGGCACGCA | + |
|
Preference number: 4 (lower is better) Translates to: SHTVSRMNLALLALCCNPFYTIH*VQEWHA Trigger: TGCGTGCCATTCCTGCACTCAATGTATTGTGTAAAA...GGGATTACAGCATAATGCTAGCAGGGCCAGGTTCATCCTTGAGACAGTGTGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395176.3 |
||
| CDS-3UTR CCA 90 bp | AGCCTGCTCTGCGTAAAGAACCAAGTCTCCACCATGAACACCAAGCCACCAACTATACCAAACCACTCCTaGCTTTGTTTAGACCCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLLCVKNQVSTMNTKPPTIPNHS*LCLDPR Trigger: TCTAGGGTCTAAACAAAGCCAGGAGTGGTTTGGTAT...AGTTGGTGGCTTGGTGTTCATGGTGGAGACTTGGTTCTTTACGCAGAGCAGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395176.3 |
||
| CDS-3UTR GCA 90 bp | AGTCCCGAACAGAAACACTTGAGCACCTACAATCTCACAGCCAACTCCCTGCCAAACAGGGGACTTAAGTaGAGAGTTTGTCACTCTATT | + |
|
Preference number: 4 (lower is better) Translates to: SPEQKHLSTYNLTANSLPNRGLK*RVCHSI Trigger: AATAGAGTGACAAACTCTGCACTTAAGTCCCCTGTT...TGGCAGGGAGTTGGCTGTGAGATTGTAGGTGCTCAAGTGTTTCTGTTCGGGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395176.3 |
||
| CDS-3UTR CCA 90 bp | AGTCCCGAACAGAAACACTTGAGCACCTACAATCTCACAGCCAACTCCCTGCCACTTTTCAGGCTAGATTaGCACAATGATGGAATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SPEQKHLSTYNLTANSLPLFRLD*HNDGMV Trigger: AACCATTCCATCATTGTGCCAATCTAGCCTGAAAAG...TGGCAGGGAGTTGGCTGTGAGATTGTAGGTGCTCAAGTGTTTCTGTTCGGGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| 3UTR CAA 72 bp | TTTTACAGATTCACACTCAGTCCCGAACAGAAACACTaGAGCACCTACAATCTCACAGCCAACTCCCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: FYRFTLSPEQKH*STYNLTANSLP Trigger: TGGCAGGGAGTTGGCTGTGAGATTGTAGGTGCTCAAGTGTTTCTGTTCGGGACTGAGTGTGAATCTGTAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| CDS TCA 90 bp | GGAGGGTGGCACTGCCCAGCACCACGTAGGCCTGGGAGATGCGCGTaGAGCGCTCGGCGGCCTCCGCGCTCCCGGAGTTGCGGTCCGGGT | + |
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Preference number: 5 (lower is better) Translates to: GGWHCPAPRRPGRCA*SARRPPRSRSCGPG Trigger: ACCCGGACCGCAACTCCGGGAGCGCGGAGGCCGCCGAGCGCTTCACGCGCATCTCCCAGGCCTACGTGGTGCTGGGCAGTGCCACCCTCC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| CDS TCA 90 bp | GCGTCCTGGAGGGCCGGACGCCAGGTCCGCGCAGGTCCTCGTCGCTaGGTAGGCCGCGATCATACTTGCGACGGAGGGTGGCACTGCCCA | + |
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Preference number: 5 (lower is better) Translates to: ASWRAGRQVRAGPRR*VGRDHTCDGGWHCP Trigger: TGGGCAGTGCCACCCTCCGTCGCAAGTATGATCGCGGCCTACTCAGCGACGAGGACCTGCGCGGACCTGGCGTCCGGCCCTCCAGGACGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| CDS GCA 90 bp | TCTCGGGTATCCTCCCAGCGGAGGCCTTTCATGGACCGATACTCCTaGCGTTTGCGAAGGGCCTCCCGCCGGGCCCTCAGGCGCCGTTCC | + |
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Preference number: 5 (lower is better) Translates to: SRVSSQRRPFMDRYS*RLRRASRRALRRRS Trigger: GGAACGGCGCCTGAGGGCCCGGCGGGAGGCCCTTCGCAAACGGCAGGAGTATCGGTCCATGAAAGGCCTCCGCTGGGAGGATACCCGAGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| CDS-3UTR CAA 90 bp | GTGGAGCGATGTGCAGGTCATCGGCTAAGCTGGGCGGGTCGGGGAGGGCAGGGGAGGCCGCGATCATACTaGCGACGGAGGGTGGCACTG | + |
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Preference number: 5 (lower is better) Translates to: VERCAGHRLSWAGRGGQGRPRSY*RRRVAL Trigger: CAGTGCCACCCTCCGTCGCAAGTATGATCGCGGCCT...CCCCTGCCCTCCCCGACCCGCCCAGCTTAGCCGATGACCTGCACATCGCTCCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| CDS CCA 90 bp | AAATGGCAGCCGTGTCTCGGGTATCCTCCCAGCGGAGGCCTTTCATaGACCGATACTCCTGCCGTTTGCGAAGGGCCTCCCGCCGGGCCC | + |
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Preference number: 5 (lower is better) Translates to: KWQPCLGYPPSGGLS*TDTPAVCEGPPAGP Trigger: GGGCCCGGCGGGAGGCCCTTCGCAAACGGCAGGAGTATCGGTCCATGAAAGGCCTCCGCTGGGAGGATACCCGAGACACGGCTGCCATTT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| CDS-3UTR CAA 90 bp | GTGGAGCGATGTGCAGGTCATCGGCTAAGCTGGGCGGGTCGGGGAGGGCAGGGGGGCTGCCATGTTGAATaGATTCGGCAGGCGGTGCAA | + |
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Preference number: 5 (lower is better) Translates to: VERCAGHRLSWAGRGGQGGCHVE*IRQAVQ Trigger: TTGCACCGCCTGCCGAATCAATTCAACATGGCAGCC...CCCCTGCCCTCCCCGACCCGCCCAGCTTAGCCGATGACCTGCACATCGCTCCAC 64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| CDS-3UTR CAA 90 bp | ACCCCCTTCACTCCTGGGCTTTCGGGACTCTACAGCGTGGGGCCTCTTTCTCAGCGATACTCCTGCCGTTaGCGAAGGGCCTCCCGCCGG | + |
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Preference number: 5 (lower is better) Translates to: TPFTPGLSGLYSVGPLSQRYSCR*RRASRR Trigger: CCGGCGGGAGGCCCTTCGCAAACGGCAGGAGTATCG...CTGAGAAAGAGGCCCCACGCTGTAGAGTCCCGAAAGCCCAGGAGTGAAGGGGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| CDS TCA 90 bp | GCTCCAGTTGTTCCCCGTAGTGGGCCTGGTAGAAGGCGTCAAAGTTaGACATCGTGCGGTTGGCGCCGGGGGAGGCCCGAGAACCGTCGT | + |
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Preference number: 5 (lower is better) Translates to: APVVPRSGPGRRRQS*TSCGWRRGRPENRR Trigger: ACGACGGTTCTCGGGCCTCCCCCGGCGCCAACCGCACGATGTTCAACTTTGACGCCTTCTACCAGGCCCACTACGGGGAACAACTGGAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| CDS GCA 90 bp | CCTAGGCCCAGGCTGGGTGCAGAATTTTGTGGAAAGCCACGGGCCTaGAGCAACCTCCAAGGTAACAGCCGCTGCCACCATCGCCAGCGC | + |
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Preference number: 5 (lower is better) Translates to: PRPRLGAEFCGKPRA*SNLQGNSRCHHRQR Trigger: GCGCTGGCGATGGTGGCAGCGGCTGTTACCTTGGAGGTTGCTGCAGGCCCGTGGCTTTCCACAAAATTCTGCACCCAGCCTGGGCCTAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| CDS GCA 90 bp | CCTGCGTGGCTGTGGAGGGGACGCCGAGCAGATCATACAGCGCCGTaGGCGAATACGAGCAGTCGCCCTGGGAATAAGTCCTCGCTCCTA | + |
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Preference number: 5 (lower is better) Translates to: PAWLWRGRRADHTAP*ANTSSRPGNKSSLL Trigger: TAGGAGCGAGGACTTATTCCCAGGGCGACTGCTCGTATTCGCGCACGGCGCTGTATGATCTGCTCGGCGTCCCCTCCACAGCCACGCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| CDS TCA 90 bp | TGCGGTCCGGGTGGTAGAGAAAGCACTGACGGTAGTAAGCCGCCTTaGTTTGGGCCTGCGTGGCTGTGGAGGGGACGCCGAGCAGATCAT | + |
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Preference number: 5 (lower is better) Translates to: CGPGGRESTDGSKPP*FGPAWLWRGRRADH Trigger: ATGATCTGCTCGGCGTCCCCTCCACAGCCACGCAGGCCCAAATCAAGGCGGCTTACTACCGTCAGTGCTTTCTCTACCACCCGGACCGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| CDS-3UTR CAA 90 bp | GTGACAGCCAGCCACACTGTCTCAAGGATGAACCTGGCCCTGCTAGCATTATGCTTGAACATCGTGCGGTaGGCGCCGGGGGAGGCCCGA | + |
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Preference number: 5 (lower is better) Translates to: VTASHTVSRMNLALLALCLNIVR*APGEAR Trigger: TCGGGCCTCCCCCGGCGCCAACCGCACGATGTTCAA...GCATAATGCTAGCAGGGCCAGGTTCATCCTTGAGACAGTGTGGCTGGCTGTCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| CDS-3UTR CAA 90 bp | TGGACCACAGTGGAGCGATGTGCAGGTCATCGGCTAAGCTGGGCGGGTCGGGGACGAGTGTTCCAGAAGTaGACCACATCTGGAAGCAAG | + |
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Preference number: 5 (lower is better) Translates to: WTTVERCAGHRLSWAGRGRVFQK*TTSGSK Trigger: CTTGCTTCCAGATGTGGTCAACTTCTGGAACACTCG...TCCCCGACCCGCCCAGCTTAGCCGATGACCTGCACATCGCTCCACTGTGGTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| CDS-3UTR CAA 90 bp | GTGGAGCGATGTGCAGGTCATCGGCTAAGCTGGGCGGGTCGGGGAGGGCAGGGGCCCAGACCTTTTCTTTaGGTAGTCAACAATTGGTCA | + |
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Preference number: 5 (lower is better) Translates to: VERCAGHRLSWAGRGGQGPRPFL*VVNNWS Trigger: TGACCAATTGTTGACTACCAAAAGAAAAGGTCTGGG...CCCCTGCCCTCCCCGACCCGCCCAGCTTAGCCGATGACCTGCACATCGCTCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| CDS-3UTR CAA 90 bp | ACAGACTCTGGAAGAAGCACCCTAGAGACTCCAGGAACCCCCTTCACTCCTGGGTGCAATCCCAGCACTTaGGGAGGCTGGACGGGCAGA | + |
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Preference number: 5 (lower is better) Translates to: TDSGRSTLETPGTPFTPGCNPST*GGWTGR Trigger: TCTGCCCGTCCAGCCTCCCAAAGTGCTGGGATTGCA...CCCAGGAGTGAAGGGGGTTCCTGGAGTCTCTAGGGTGCTTCTTCCAGAGTCTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| CDS-3UTR CAA 90 bp | TGCAGAGTTTGTCACTCTATTTCTGGGAGGGGATGGGCTGCACAGTGTGCAATGCCGTTCCCGCTCCAGTaGTTCCCCGTAGTGGGCCTG | + |
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Preference number: 5 (lower is better) Translates to: CRVCHSISGRGWAAQCAMPFPLQ*FPVVGL Trigger: CAGGCCCACTACGGGGAACAACTGGAGCGGGAACGG...CATTGCACACTGTGCAGCCCATCCCCTCCCAGAAATAGAGTGACAAACTCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| CDS-3UTR CAA 90 bp | GGGCCTCTTTCTCAGACATCGAAAGGCCTCCTTTTCTGGACCACAGTGGAGCGAGCTGGGTGCAGAATTTaGTGGAAAGCCACGGGCCTG | + |
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Preference number: 5 (lower is better) Translates to: GPLSQTSKGLLFWTTVERAGCRI*WKATGL Trigger: CAGGCCCGTGGCTTTCCACAAAATTCTGCACCCAGC...TCGCTCCACTGTGGTCCAGAAAAGGAGGCCTTTCGATGTCTGAGAAAGAGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| CDS-3UTR CAA 90 bp | AGTCCCGAACAGAAACACTTGAGCACCTACAATCTCACAGCCAACTCCCTGCCAGTAAGCCGCCTTGATTaGGGCCTGCGTGGCTGTGGA | + |
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Preference number: 5 (lower is better) Translates to: SPEQKHLSTYNLTANSLPVSRLD*GLRGCG Trigger: TCCACAGCCACGCAGGCCCAAATCAAGGCGGCTTAC...TGGCAGGGAGTTGGCTGTGAGATTGTAGGTGCTCAAGTGTTTCTGTTCGGGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| CDS-3UTR CAA 90 bp | TGGACCACAGTGGAGCGATGTGCAGGTCATCGGCTAAGCTGGGCGGGTCGGGGAGGAGATAAATCTTGCTaGGGGCTAAACAATAAAGCT | + |
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Preference number: 5 (lower is better) Translates to: WTTVERCAGHRLSWAGRGGDKSC*GLNNKA Trigger: AGCTTTATTGTTTAGCCCCAAGCAAGATTTATCTCC...TCCCCGACCCGCCCAGCTTAGCCGATGACCTGCACATCGCTCCACTGTGGTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| CDS-3UTR CAA 90 bp | AGTCCCGAACAGAAACACTTGAGCACCTACAATCTCACAGCCAACTCCCTGCCAGGTCTCACCTGCGGCTaGGGGAAGTCACAGAAAGAC | + |
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Preference number: 5 (lower is better) Translates to: SPEQKHLSTYNLTANSLPGLTCG*GKSQKD Trigger: GTCTTTCTGTGACTTCCCCAAGCCGCAGGTGAGACC...TGGCAGGGAGTTGGCTGTGAGATTGTAGGTGCTCAAGTGTTTCTGTTCGGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| CDS-3UTR CAA 90 bp | CTGGTAAAGGGAGGACCAGGTGACAGCCAGCCACACTGTCTCAAGGATGAACCTCCCGAACAGAAACACTaGAGCACCTACAATCTCACA | + |
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Preference number: 5 (lower is better) Translates to: LVKGGPGDSQPHCLKDEPPEQKH*STYNLT Trigger: TGTGAGATTGTAGGTGCTCAAGTGTTTCTGTTCGGG...AGGTTCATCCTTGAGACAGTGTGGCTGGCTGTCACCTGGTCCTCCCTTTACCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| CDS TCA 90 bp | CCCTTCTCTCTCCGATTAAATATAAAAGCCGATGATGATGAAGATTaGAAAGATGAGGAAAATGGCAGCCGTGTCTCGGGTATCCTCCCA | + |
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Preference number: 5 (lower is better) Translates to: PFSLRLNIKADDDED*KDEENGSRVSGILP Trigger: TGGGAGGATACCCGAGACACGGCTGCCATTTTCCTCATCTTTTCAATCTTCATCATCATCGGCTTTTATATTTAATCGGAGAGAGAAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| CDS TCA 72 bp | CACTGCCCAGCACCACGTAGGCCTGGGAGATGCGCGTaGAGCGCTCGGCGGCCTCCGCGCTCCCGGAGTTGC | + |
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Preference number: 6 (lower is better) Translates to: HCPAPRRPGRCA*SARRPPRSRSC Trigger: GCAACTCCGGGAGCGCGGAGGCCGCCGAGCGCTTCACGCGCATCTCCCAGGCCTACGTGGTGCTGGGCAGTG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| CDS TCA 72 bp | AGGGCCGGACGCCAGGTCCGCGCAGGTCCTCGTCGCTaGGTAGGCCGCGATCATACTTGCGACGGAGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: RAGRQVRAGPRR*VGRDHTCDGGW Trigger: CCACCCTCCGTCGCAAGTATGATCGCGGCCTACTCAGCGACGAGGACCTGCGCGGACCTGGCGTCCGGCCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| CDS CAA 72 bp | CAGCGGAGGCCTTTCATGGACCGATACTCCTGCCGTTaGCGAAGGGCCTCCCGCCGGGCCCTCAGGCGCCGT | + |
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Preference number: 6 (lower is better) Translates to: QRRPFMDRYSCR*RRASRRALRRR Trigger: ACGGCGCCTGAGGGCCCGGCGGGAGGCCCTTCGCAAACGGCAGGAGTATCGGTCCATGAAAGGCCTCCGCTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| CDS GCA 72 bp | AGCGGAGGCCTTTCATGGACCGATACTCCTGCCGTTTaGGAAGGGCCTCCCGCCGGGCCCTCAGGCGCCGTT | + |
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Preference number: 6 (lower is better) Translates to: SGGLSWTDTPAV*EGPPAGPSGAV Trigger: AACGGCGCCTGAGGGCCCGGCGGGAGGCCCTTCGCAAACGGCAGGAGTATCGGTCCATGAAAGGCCTCCGCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| CDS GCA 72 bp | TCCTCCCAGCGGAGGCCTTTCATGGACCGATACTCCTaGCGTTTGCGAAGGGCCTCCCGCCGGGCCCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: SSQRRPFMDRYS*RLRRASRRALR Trigger: CCTGAGGGCCCGGCGGGAGGCCCTTCGCAAACGGCAGGAGTATCGGTCCATGAAAGGCCTCCGCTGGGAGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| CDS CAA 72 bp | CTCCCGCCGGGCCCTCAGGCGCCGTTCCCGCTCCAGTaGTTCCCCGTAGTGGGCCTGGTAGAAGGCGTCAAA | + |
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Preference number: 6 (lower is better) Translates to: LPPGPQAPFPLQ*FPVVGLVEGVK Trigger: TTTGACGCCTTCTACCAGGCCCACTACGGGGAACAACTGGAGCGGGAACGGCGCCTGAGGGCCCGGCGGGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| CDS TCA 72 bp | GTTCCCCGTAGTGGGCCTGGTAGAAGGCGTCAAAGTTaGACATCGTGCGGTTGGCGCCGGGGGAGGCCCGAG | + |
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Preference number: 6 (lower is better) Translates to: VPRSGPGRRRQS*TSCGWRRGRPE Trigger: CTCGGGCCTCCCCCGGCGCCAACCGCACGATGTTCAACTTTGACGCCTTCTACCAGGCCCACTACGGGGAAC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| CDS CCA 72 bp | CCGTGTCTCGGGTATCCTCCCAGCGGAGGCCTTTCATaGACCGATACTCCTGCCGTTTGCGAAGGGCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: PCLGYPPSGGLS*TDTPAVCEGPP Trigger: GGGAGGCCCTTCGCAAACGGCAGGAGTATCGGTCCATGAAAGGCCTCCGCTGGGAGGATACCCGAGACACGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| CDS GCA 72 bp | CTGTGGAGGGGACGCCGAGCAGATCATACAGCGCCGTaGGCGAATACGAGCAGTCGCCCTGGGAATAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: LWRGRRADHTAP*ANTSSRPGNKS Trigger: GGACTTATTCCCAGGGCGACTGCTCGTATTCGCGCACGGCGCTGTATGATCTGCTCGGCGTCCCCTCCACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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| CDS CAA 90 bp | GTCCGGGTGGTAGAGAAAGCACTGACGGTAGTAAGCCGCCTTGATTaGGGCCTGCGTGGCTGTGGAGGGGACGCCGAGCAGATCATACAG | + |
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Preference number: 6 (lower is better) Translates to: VRVVEKALTVVSRLD*GLRGCGGDAEQIIQ Trigger: CTGTATGATCTGCTCGGCGTCCCCTCCACAGCCACGCAGGCCCAAATCAAGGCGGCTTACTACCGTCAGTGCTTTCTCTACCACCCGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395176.3 |
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