Pregenerated sensors for DNAJC3-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000247400Ensembl transcript IDs: ENST00000499499.2, ENST00000606011.1, ENST00000662244.1, ENST00000671463.1
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCAGCCTGCGCATGCGGACTCGGCGGCCGCCACCGACTCCCCGTCTaGTTCCCTCCGGGCGGCAGCCGCGGTTTGGAGCTTGCTGACAGC | + |
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Preference number: 5 (lower is better) Translates to: AACACGLGGRHRLPV*FPPGGSRGLELADS Trigger: GCTGTCAGCAAGCTCCAAACCGCGGCTGCCGCCCGGAGGGAAGCAGACGGGGAGTCGGTGGCGGCCGCCGAGTCCGCATGCGCAGGCTGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000499499.2 ENST00000671463.1 |
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| CDS GCA 90 bp | CTAGCGCGGCGGGACCGGCCCAAAAGGGCCTTTGCAGCCTGCGCATaGGGACTCGGCGGCCGCCACCGACTCCCCGTCTGCTTCCCTCCG | + |
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Preference number: 5 (lower is better) Translates to: LARRDRPKRAFAACA*GLGGRHRLPVCFPP Trigger: CGGAGGGAAGCAGACGGGGAGTCGGTGGCGGCCGCCGAGTCCGCATGCGCAGGCTGCAAAGGCCCTTTTGGGCCGGTCCCGCCGCGCTAG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000499499.2 ENST00000671463.1 |
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| CDS GCA 90 bp | CCCACTCGCCAACCTAGCGCGGCGGGACCGGCCCAAAAGGGCCTTTaGAGCCTGCGCATGCGGACTCGGCGGCCGCCACCGACTCCCCGT | + |
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Preference number: 5 (lower is better) Translates to: PTRQPSAAGPAQKGL*SLRMRTRRPPPTPR Trigger: ACGGGGAGTCGGTGGCGGCCGCCGAGTCCGCATGCGCAGGCTGCAAAGGCCCTTTTGGGCCGGTCCCGCCGCGCTAGGTTGGCGAGTGGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000499499.2 ENST00000671463.1 |
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| CDS GCA 90 bp | GCCAACCTAGCGCGGCGGGACCGGCCCAAAAGGGCCTTTGCAGCCTaGGCATGCGGACTCGGCGGCCGCCACCGACTCCCCGTCTGCTTC | + |
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Preference number: 5 (lower is better) Translates to: ANLARRDRPKRAFAA*ACGLGGRHRLPVCF Trigger: GAAGCAGACGGGGAGTCGGTGGCGGCCGCCGAGTCCGCATGCGCAGGCTGCAAAGGCCCTTTTGGGCCGGTCCCGCCGCGCTAGGTTGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000499499.2 ENST00000671463.1 |
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| CDS CCA 90 bp | GCCACCGACTCCCCGTCTGCTTCCCTCCGGGCGGCAGCCGCGGTTTaGAGCTTGCTGACAGCTCTGCGACCGGCGGGCGCAGCCTCGTCT | + |
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Preference number: 5 (lower is better) Translates to: ATDSPSASLRAAAAV*SLLTALRPAGAASS Trigger: AGACGAGGCTGCGCCCGCCGGTCGCAGAGCTGTCAGCAAGCTCCAAACCGCGGCTGCCGCCCGGAGGGAAGCAGACGGGGAGTCGGTGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671463.1 |
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| CDS CCA 90 bp | ACGCTGCGGCTGCGCTTTCCTCTCGTAACACCACGCTGGCGAACCTaGAAAGGATCAAATAGTCCCACTCGCCAACCTAGCGCGGCGGGA | + |
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Preference number: 5 (lower is better) Translates to: TLRLRFPLVTPRWRT*KGSNSPTRQPSAAG Trigger: TCCCGCCGCGCTAGGTTGGCGAGTGGGACTATTTGATCCTTTCCAGGTTCGCCAGCGTGGTGTTACGAGAGGAAAGCGCAGCCGCAGCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000499499.2 ENST00000671463.1 |
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| CDS CCA 90 bp | CCCATTCGTACGCTGCGGCTGCGCTTTCCTCTCGTAACACCACGCTaGCGAACCTGGAAAGGATCAAATAGTCCCACTCGCCAACCTAGC | + |
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Preference number: 5 (lower is better) Translates to: PIRTLRLRFPLVTPR*RTWKGSNSPTRQPS Trigger: GCTAGGTTGGCGAGTGGGACTATTTGATCCTTTCCAGGTTCGCCAGCGTGGTGTTACGAGAGGAAAGCGCAGCCGCAGCGTACGAATGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000499499.2 ENST00000671463.1 |
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| CDS TCA 90 bp | TACTTCTGGGGGCTGGGAAGTCCAAGATCAAGGCTCTTGCAGGTTTaGGTTTCTGATGAGGGCCTTCTGGTAGCGTCCTCACATGGCAGA | + |
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Preference number: 5 (lower is better) Translates to: YFWGLGSPRSRLLQV*VSDEGLLVASSHGR Trigger: TCTGCCATGTGAGGACGCTACCAGAAGGCCCTCATCAGAAACTCAAACCTGCAAGAGCCTTGATCTTGGACTTCCCAGCCCCCAGAAGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000606011.1 |
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| CDS GCA 90 bp | AATGTTCTAATCATCAGATCGCCCCAGCTTCTCCTGACCGTTTCTTaGTTACGGCTCAGTTCAGACAGTATTTGTTCCGGGACGCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: NVLIIRSPQLLLTVS*LRLSSDSICSGTLS Trigger: GCTGAGCGTCCCGGAACAAATACTGTCTGAACTGAGCCGTAAGCAAGAAACGGTCAGGAGAAGCTGGGGCGATCTGATGATTAGAACATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000499499.2 ENST00000606011.1 ENST00000671463.1 |
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| CDS TCA 90 bp | GCTGGGAAGTTCAAGATCAAGGTGCCGCCGTGTTCCATTTTCTGGTaGAGGTCCAATCTCTGCTTCCAAGATGAAGCCTTGATGCTGAAT | + |
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Preference number: 5 (lower is better) Translates to: AGKFKIKVPPCSIFW*RSNLCFQDEALMLN Trigger: ATTCAGCATCAAGGCTTCATCTTGGAAGCAGAGATTGGACCTTCACCAGAAAATGGAACACGGCGGCACCTTGATCTTGAACTTCCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662244.1 |
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| CDS GCA 90 bp | TTTATTTTCTCTCAGTTCTGGAGGCTGGGAAGTTCAAGATCAAGGTaGCGCCGTGTTCCATTTTCTGGTGAAGGTCCAATCTCTGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: FIFSQFWRLGSSRSR*RRVPFSGEGPISAS Trigger: GGAAGCAGAGATTGGACCTTCACCAGAAAATGGAACACGGCGGCACCTTGATCTTGAACTTCCCAGCCTCCAGAACTGAGAGAAAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662244.1 |
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| CDS TCA 90 bp | GAGAAGCACTACAACTCTTTCAATATTTTGCTGCTTAGTGTTCTCTaGGCCAGGTGGATGCCTCTCTTCCTCCATGCATCCTTTCTCCAC | + |
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Preference number: 5 (lower is better) Translates to: EKHYNSFNILLLSVL*ARWMPLFLHASFLH Trigger: GTGGAGAAAGGATGCATGGAGGAAGAGAGGCATCCACCTGGCTCAGAGAACACTAAGCAGCAAAATATTGAAAGAGTTGTAGTGCTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662244.1 |
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| CDS TCA 90 bp | ACTTTGACCACCTGGCCAAGACAGTGTTTCCAGGTTTCTGTACTATaGAGTTACTCTCCTCCTCCCTTTCCATACTCTGTTCTTTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: TLTTWPRQCFQVSVL*SYSPPPFPYSVLWK Trigger: CTTCCAAAGAACAGAGTATGGAAAGGGAGGAGGAGAGTAACTTCATAGTACAGAAACCTGGAAACACTGTCTTGGCCAGGTGGTCAAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000499499.2 ENST00000671463.1 |
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| CDS GCA 90 bp | ATAGAAGCAGTTAAGAGAAGCACTACAACTCTTTCAATATTTTGCTaGTTAGTGTTCTCTGAGCCAGGTGGATGCCTCTCTTCCTCCATG | + |
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Preference number: 5 (lower is better) Translates to: IEAVKRSTTTLSIFC*LVFSEPGGCLSSSM Trigger: CATGGAGGAAGAGAGGCATCCACCTGGCTCAGAGAACACTAAGCAGCAAAATATTGAAAGAGTTGTAGTGCTTCTCTTAACTGCTTCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662244.1 |
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| CDS GCA 90 bp | CATCCAAGGTTCTGTGAAGCTGCTGAAGGAGCCTGTCTTTGTTTGTaGTGCTATGATATAAAATTTATTTTCTCTCAGTTCTGGAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: HPRFCEAAEGACLCL*CYDIKFIFSQFWRL Trigger: CAGCCTCCAGAACTGAGAGAAAATAAATTTTATATCATAGCAGCACAAACAAAGACAGGCTCCTTCAGCAGCTTCACAGAACCTTGGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662244.1 |
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| CDS GCA 90 bp | CACAGAGGTGAATTGCCCTTCTCATCACAGTATATTGGGAGTATATaGTATCAACATGACTTGATGATATTAACTTTGACCACCTGGCCA | + |
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Preference number: 5 (lower is better) Translates to: HRGELPFSSQYIGSI*YQHDLMILTLTTWP Trigger: TGGCCAGGTGGTCAAAGTTAATATCATCAAGTCATGTTGATAGCATATACTCCCAATATACTGTGATGAGAAGGGCAATTCACCTCTGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000499499.2 ENST00000671463.1 |
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| CDS CCA 90 bp | CTTTGTTTGTGCTGCTATGATATAAAATTTATTTTCTCTCAGTTCTaGAGGCTGGGAAGTTCAAGATCAAGGTGCCGCCGTGTTCCATTT | + |
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Preference number: 5 (lower is better) Translates to: LCLCCYDIKFIFSQF*RLGSSRSRCRRVPF Trigger: AAATGGAACACGGCGGCACCTTGATCTTGAACTTCCCAGCCTCCAGAACTGAGAGAAAATAAATTTTATATCATAGCAGCACAAACAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662244.1 |
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| CDS TCA 90 bp | CCCAGCCTAGAAATGTTTCATAATAGTTATGGGGTTTCCTGGATCTaGCTCCTTTATTCTTCACATTACATTATGTTGCCTTCCCCACAA | + |
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Preference number: 5 (lower is better) Translates to: PSLEMFHNSYGVSWI*LLYSSHYIMLPSPQ Trigger: TTGTGGGGAAGGCAACATAATGTAATGTGAAGAATAAAGGAGTCAGATCCAGGAAACCCCATAACTATTATGAAACATTTCTAGGCTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000499499.2 ENST00000671463.1 |
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| CDS GCA 90 bp | AGACTAGATTGGGTTATAGGTTTTGAGAATACCACAGAGGTGAATTaGCCTTCTCATCACAGTATATTGGGAGTATATGCTATCAACATG | + |
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Preference number: 5 (lower is better) Translates to: RLDWVIGFENTTEVN*PSHHSILGVYAINM Trigger: CATGTTGATAGCATATACTCCCAATATACTGTGATGAGAAGGGCAATTCACCTCTGTGGTATTCTCAAAACCTATAACCCAATCTAGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000499499.2 ENST00000671463.1 |
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| CDS GCA 72 bp | GCGCGGCGGGACCGGCCCAAAAGGGCCTTTGCAGCCTaGGCATGCGGACTCGGCGGCCGCCACCGACTCCCC | + |
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Preference number: 6 (lower is better) Translates to: ARRDRPKRAFAA*ACGLGGRHRLP Trigger: GGGGAGTCGGTGGCGGCCGCCGAGTCCGCATGCGCAGGCTGCAAAGGCCCTTTTGGGCCGGTCCCGCCGCGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000499499.2 ENST00000671463.1 |
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| CDS GCA 72 bp | GCATGCGGACTCGGCGGCCGCCACCGACTCCCCGTCTaGTTCCCTCCGGGCGGCAGCCGCGGTTTGGAGCTT | + |
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Preference number: 6 (lower is better) Translates to: ACGLGGRHRLPV*FPPGGSRGLEL Trigger: AAGCTCCAAACCGCGGCTGCCGCCCGGAGGGAAGCAGACGGGGAGTCGGTGGCGGCCGCCGAGTCCGCATGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000499499.2 ENST00000671463.1 |
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| CDS GCA 72 bp | CGGGACCGGCCCAAAAGGGCCTTTGCAGCCTGCGCATaGGGACTCGGCGGCCGCCACCGACTCCCCGTCTGC | + |
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Preference number: 6 (lower is better) Translates to: RDRPKRAFAACA*GLGGRHRLPVC Trigger: GCAGACGGGGAGTCGGTGGCGGCCGCCGAGTCCGCATGCGCAGGCTGCAAAGGCCCTTTTGGGCCGGTCCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000499499.2 ENST00000671463.1 |
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| CDS GCA 72 bp | CAACCTAGCGCGGCGGGACCGGCCCAAAAGGGCCTTTaGAGCCTGCGCATGCGGACTCGGCGGCCGCCACCG | + |
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Preference number: 6 (lower is better) Translates to: QPSAAGPAQKGL*SLRMRTRRPPP Trigger: CGGTGGCGGCCGCCGAGTCCGCATGCGCAGGCTGCAAAGGCCCTTTTGGGCCGGTCCCGCCGCGCTAGGTTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000499499.2 ENST00000671463.1 |
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| CDS CAA 72 bp | CTCCCCGTCTGCTTCCCTCCGGGCGGCAGCCGCGGTTaGGAGCTTGCTGACAGCTCTGCGACCGGCGGGCGC | + |
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Preference number: 6 (lower is better) Translates to: LPVCFPPGGSRG*ELADSSATGGR Trigger: GCGCCCGCCGGTCGCAGAGCTGTCAGCAAGCTCCAAACCGCGGCTGCCGCCCGGAGGGAAGCAGACGGGGAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671463.1 |
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| CDS CAA 90 bp | CGCCACCGACTCCCCGTCTGCTTCCCTCCGGGCGGCAGCCGCGGTTaGGAGCTTGCTGACAGCTCTGCGACCGGCGGGCGCAGCCTCGTC | + |
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Preference number: 6 (lower is better) Translates to: RHRLPVCFPPGGSRG*ELADSSATGGRSLV Trigger: GACGAGGCTGCGCCCGCCGGTCGCAGAGCTGTCAGCAAGCTCCAAACCGCGGCTGCCGCCCGGAGGGAAGCAGACGGGGAGTCGGTGGCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671463.1 |
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| CDS TCA 72 bp | CTTCCCTCCGGGCGGCAGCCGCGGTTTGGAGCTTGCTaGCAGCTCTGCGACCGGCGGGCGCAGCCTCGTCTC | + |
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Preference number: 6 (lower is better) Translates to: LPSGRQPRFGAC*QLCDRRAQPRL Trigger: GAGACGAGGCTGCGCCCGCCGGTCGCAGAGCTGTCAGCAAGCTCCAAACCGCGGCTGCCGCCCGGAGGGAAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671463.1 |
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| CDS CCA 72 bp | TCCCCGTCTGCTTCCCTCCGGGCGGCAGCCGCGGTTTaGAGCTTGCTGACAGCTCTGCGACCGGCGGGCGCA | + |
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Preference number: 6 (lower is better) Translates to: SPSASLRAAAAV*SLLTALRPAGA Trigger: TGCGCCCGCCGGTCGCAGAGCTGTCAGCAAGCTCCAAACCGCGGCTGCCGCCCGGAGGGAAGCAGACGGGGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671463.1 |
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| CDS CCA 72 bp | CCCTGCAGCTTCCCTCAGACTCCCCGGGACCGTGTTTaGCCTTCCCATTCGTACGCTGCGGCTGCGCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: PCSFPQTPRDRV*PSHSYAAAALS Trigger: GGAAAGCGCAGCCGCAGCGTACGAATGGGAAGGCCAAACACGGTCCCGGGGAGTCTGAGGGAAGCTGCAGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000499499.2 ENST00000606011.1 ENST00000671463.1 |
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| CDS CAA 72 bp | GCCCTGCAGCTTCCCTCAGACTCCCCGGGACCGTGTTaGGCCTTCCCATTCGTACGCTGCGGCTGCGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: ALQLPSDSPGPC*AFPFVRCGCAF Trigger: GAAAGCGCAGCCGCAGCGTACGAATGGGAAGGCCAAACACGGTCCCGGGGAGTCTGAGGGAAGCTGCAGGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000499499.2 ENST00000606011.1 ENST00000671463.1 |
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| CDS GCA 72 bp | TTACCGGCTCACTCGAGACCCCAATTCCAGGCGCCCTaGAGCTTCCCTCAGACTCCCCGGGACCGTGTTTGG | + |
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Preference number: 6 (lower is better) Translates to: LPAHSRPQFQAP*SFPQTPRDRVW Trigger: CCAAACACGGTCCCGGGGAGTCTGAGGGAAGCTGCAGGGCGCCTGGAATTGGGGTCTCGAGTGAGCCGGTAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000499499.2 ENST00000606011.1 ENST00000671463.1 |
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| CDS CCA 72 bp | ACGCTGCGGCTGCGCTTTCCTCTCGTAACACCACGCTaGCGAACCTGGAAAGGATCAAATAGTCCCACTCGC | + |
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Preference number: 6 (lower is better) Translates to: TLRLRFPLVTPR*RTWKGSNSPTR Trigger: GCGAGTGGGACTATTTGATCCTTTCCAGGTTCGCCAGCGTGGTGTTACGAGAGGAAAGCGCAGCCGCAGCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000499499.2 ENST00000671463.1 |
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| CDS CAA 90 bp | GCTTCTCCTGACCGTTTCTTGCTTACGGCTCAGTTCAGACAGTATTaGTTCCGGGACGCTCAGCGGGAGGCGGTTTTTACCGGCTCACTC | + |
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Preference number: 6 (lower is better) Translates to: ASPDRFLLTAQFRQY*FRDAQREAVFTGSL Trigger: GAGTGAGCCGGTAAAAACCGCCTCCCGCTGAGCGTCCCGGAACAAATACTGTCTGAACTGAGCCGTAAGCAAGAAACGGTCAGGAGAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000499499.2 ENST00000606011.1 ENST00000671463.1 |
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| CDS CCA 72 bp | CTGCGCTTTCCTCTCGTAACACCACGCTGGCGAACCTaGAAAGGATCAAATAGTCCCACTCGCCAACCTAGC | + |
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Preference number: 6 (lower is better) Translates to: LRFPLVTPRWRT*KGSNSPTRQPS Trigger: GCTAGGTTGGCGAGTGGGACTATTTGATCCTTTCCAGGTTCGCCAGCGTGGTGTTACGAGAGGAAAGCGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000499499.2 ENST00000671463.1 |
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| CDS TCA 72 bp | GGGCTGGGAAGTCCAAGATCAAGGCTCTTGCAGGTTTaGGTTTCTGATGAGGGCCTTCTGGTAGCGTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: GLGSPRSRLLQV*VSDEGLLVASS Trigger: TGAGGACGCTACCAGAAGGCCCTCATCAGAAACTCAAACCTGCAAGAGCCTTGATCTTGGACTTCCCAGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000606011.1 |
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| CDS CAA 72 bp | GACCGTTTCTTGCTTACGGCTCAGTTCAGACAGTATTaGTTCCGGGACGCTCAGCGGGAGGCGGTTTTTACC | + |
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Preference number: 6 (lower is better) Translates to: DRFLLTAQFRQY*FRDAQREAVFT Trigger: GGTAAAAACCGCCTCCCGCTGAGCGTCCCGGAACAAATACTGTCTGAACTGAGCCGTAAGCAAGAAACGGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000499499.2 ENST00000606011.1 ENST00000671463.1 |
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| CDS GCA 72 bp | CGGGGCGTTCCCAAGTTTCCAGGCCAATTACCTACCTaGCTTAGAGCAATTACGCACTTCTCTCTGGTAGTC | + |
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Preference number: 6 (lower is better) Translates to: RGVPKFPGQLPT*LRAITHFSLVV Trigger: GACTACCAGAGAGAAGTGCGTAATTGCTCTAAGGCAGGTAGGTAATTGGCCTGGAAACTTGGGAACGCCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000499499.2 ENST00000671463.1 |
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| CDS CAA 90 bp | TTGGTGACGCCGGAGGAAGTGGCCGTGAACAGGCTTAATGCCGCATaGAGTAACTTCAACCTCATCTTGCTCAGGTTCATATCTCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: LVTPEEVAVNRLNAA*SNFNLILLRFISLL Trigger: CAGGAGAGATATGAACCTGAGCAAGATGAGGTTGAAGTTACTCAATGCGGCATTAAGCCTGTTCACGGCCACTTCCTCCGGCGTCACCAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000499499.2 ENST00000662244.1 ENST00000671463.1 |
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| CDS GCA 72 bp | ATCATCAGATCGCCCCAGCTTCTCCTGACCGTTTCTTaGTTACGGCTCAGTTCAGACAGTATTTGTTCCGGG | + |
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Preference number: 6 (lower is better) Translates to: IIRSPQLLLTVS*LRLSSDSICSG Trigger: CCCGGAACAAATACTGTCTGAACTGAGCCGTAAGCAAGAAACGGTCAGGAGAAGCTGGGGCGATCTGATGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000499499.2 ENST00000606011.1 ENST00000671463.1 |
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| CDS CAA 72 bp | AATCATCAGATCGCCCCAGCTTCTCCTGACCGTTTCTaGCTTACGGCTCAGTTCAGACAGTATTTGTTCCGG | + |
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Preference number: 6 (lower is better) Translates to: NHQIAPASPDRF*LTAQFRQYLFR Trigger: CCGGAACAAATACTGTCTGAACTGAGCCGTAAGCAAGAAACGGTCAGGAGAAGCTGGGGCGATCTGATGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000499499.2 ENST00000606011.1 ENST00000671463.1 |
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| CDS CAA 72 bp | CCGGAGGAAGTGGCCGTGAACAGGCTTAATGCCGCATaGAGTAACTTCAACCTCATCTTGCTCAGGTTCATA | + |
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Preference number: 6 (lower is better) Translates to: PEEVAVNRLNAA*SNFNLILLRFI Trigger: TATGAACCTGAGCAAGATGAGGTTGAAGTTACTCAATGCGGCATTAAGCCTGTTCACGGCCACTTCCTCCGG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000499499.2 ENST00000662244.1 ENST00000671463.1 |
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| CDS CAA 90 bp | AAATGTTCTAATCATCAGATCGCCCCAGCTTCTCCTGACCGTTTCTaGCTTACGGCTCAGTTCAGACAGTATTTGTTCCGGGACGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: KCSNHQIAPASPDRF*LTAQFRQYLFRDAQ Trigger: CTGAGCGTCCCGGAACAAATACTGTCTGAACTGAGCCGTAAGCAAGAAACGGTCAGGAGAAGCTGGGGCGATCTGATGATTAGAACATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000499499.2 ENST00000606011.1 ENST00000671463.1 |
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| CDS TCA 72 bp | TTCAAGATCAAGGTGCCGCCGTGTTCCATTTTCTGGTaGAGGTCCAATCTCTGCTTCCAAGATGAAGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: FKIKVPPCSIFW*RSNLCFQDEAL Trigger: CAAGGCTTCATCTTGGAAGCAGAGATTGGACCTTCACCAGAAAATGGAACACGGCGGCACCTTGATCTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662244.1 |
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| CDS TCA 72 bp | ACTTCAACCTCATCTTGCTCAGGTTCATATCTCTCCTaGATTTCCCCTGGTAAGCGCAAGATTCAGGATCCG | + |
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Preference number: 6 (lower is better) Translates to: TSTSSCSGSYLS*ISPGKRKIQDP Trigger: CGGATCCTGAATCTTGCGCTTACCAGGGGAAATTCAGGAGAGATATGAACCTGAGCAAGATGAGGTTGAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000499499.2 ENST00000662244.1 ENST00000671463.1 |
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| CDS TCA 72 bp | ACCTGGCCAAGACAGTGTTTCCAGGTTTCTGTACTATaGAGTTACTCTCCTCCTCCCTTTCCATACTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: TWPRQCFQVSVL*SYSPPPFPYSV Trigger: AACAGAGTATGGAAAGGGAGGAGGAGAGTAACTTCATAGTACAGAAACCTGGAAACACTGTCTTGGCCAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000499499.2 ENST00000671463.1 |
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| CDS CAA 72 bp | AGGCTTAATGCCGCATTGAGTAACTTCAACCTCATCTaGCTCAGGTTCATATCTCTCCTGAATTTCCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: RLNAALSNFNLI*LRFISLLNFPW Trigger: CCAGGGGAAATTCAGGAGAGATATGAACCTGAGCAAGATGAGGTTGAAGTTACTCAATGCGGCATTAAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000499499.2 ENST00000662244.1 ENST00000671463.1 |
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| CDS GCA 72 bp | GTTAAGAGAAGCACTACAACTCTTTCAATATTTTGCTaGTTAGTGTTCTCTGAGCCAGGTGGATGCCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: VKRSTTTLSIFC*LVFSEPGGCLS Trigger: AGAGAGGCATCCACCTGGCTCAGAGAACACTAAGCAGCAAAATATTGAAAGAGTTGTAGTGCTTCTCTTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662244.1 |
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| CDS CAA 90 bp | AGGCATCCAAGGTTCTGTGAAGCTGCTGAAGGAGCCTGTCTTTGTTaGTGCTGCTATGATATAAAATTTATTTTCTCTCAGTTCTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: RHPRFCEAAEGACLC*CCYDIKFIFSQFWR Trigger: CCTCCAGAACTGAGAGAAAATAAATTTTATATCATAGCAGCACAAACAAAGACAGGCTCCTTCAGCAGCTTCACAGAACCTTGGATGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662244.1 |
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| CDS CAA 72 bp | AAGGCAGTTTTTGCAGATGTGATTAAATTGAGGAACTaGAGTAGGAAGAATATCCTGGATTATCTCAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: KAVFADVIKLRN*SRKNILDYLSR Trigger: CCTGCTGAGATAATCCAGGATATTCTTCCTACTCAAGTTCCTCAATTTAATCACATCTGCAAAAACTGCCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000499499.2 ENST00000671463.1 |
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| CDS CAA 72 bp | TTCAATCTTTCCTTGTTCCCCACGACGTTGATAGTTTaGAGGAATACTGATCAGGTGTTTTATAGAATGTCC | + |
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Preference number: 6 (lower is better) Translates to: FNLSLFPTTLIV*RNTDQVFYRMS Trigger: GGACATTCTATAAAACACCTGATCAGTATTCCTCAAAACTATCAACGTCGTGGGGAACAAGGAAAGATTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000499499.2 ENST00000671463.1 |
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| CDS CAA 72 bp | TACAGGGAGGTCCCAAATACCCCTTATTTTTCTGTATaGTTAGCATCTTGCATAACCATGGTACATTTGTCA | + |
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Preference number: 6 (lower is better) Translates to: YREVPNTPYFSV*LASCITMVHLS Trigger: TGACAAATGTACCATGGTTATGCAAGATGCTAACAATACAGAAAAATAAGGGGTATTTGGGACCTCCCTGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000499499.2 ENST00000671463.1 |
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| CDS CAA 72 bp | AGGTTCTGTGAAGCTGCTGAAGGAGCCTGTCTTTGTTaGTGCTGCTATGATATAAAATTTATTTTCTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: RFCEAAEGACLC*CCYDIKFIFSQ Trigger: CTGAGAGAAAATAAATTTTATATCATAGCAGCACAAACAAAGACAGGCTCCTTCAGCAGCTTCACAGAACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662244.1 |
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| CDS GCA 72 bp | GAATTGCCCTTCTCATCACAGTATATTGGGAGTATATaGTATCAACATGACTTGATGATATTAACTTTGACC | + |
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Preference number: 6 (lower is better) Translates to: ELPFSSQYIGSI*YQHDLMILTLT Trigger: GGTCAAAGTTAATATCATCAAGTCATGTTGATAGCATATACTCCCAATATACTGTGATGAGAAGGGCAATTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000499499.2 ENST00000671463.1 |
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