RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DNAJC27 (Homo sapiens)

Ensembl gene IDs: ENSG00000115137

Ensembl transcript IDs: ENST00000264711.7, ENST00000380809.7, ENST00000468467.5, ENST00000468750.5, ENST00000492985.1, ENST00000494239.5, ENST00000534855.5

Found 425 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCCAGGTGCACAGTGCTCTCTACTGCTACCAGCAACCATTTCTATaGCAAGGGAAAGGCCTCAGATCCAGGGACAGGATAGGCAGCAGC +
Preference number: 1 (lower is better)
Translates to: SQVHSALYCYQQPFL*QGKGLRSRDRIGSS
Trigger: GCTGCTGCCTATCCTGTCCCTGGATCTGAGGCCTTTCCCTTGCCATAGAAATGGTTGCTGGTAGCAGTAGAGAGCACTGTGCACCTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR CCA 90 bp ACAGGCGGATACTACTGCAGCTGGCTCCTCCAAGTACTTCTGTCTTaGGGCCTGATTCCTCATTCCCAGGTGCACAGTGCTCTCTACTGC +
Preference number: 1 (lower is better)
Translates to: TGGYYCSWLLQVLLS*GLIPHSQVHSALYC
Trigger: GCAGTAGAGAGCACTGTGCACCTGGGAATGAGGAATCAGGCCCCAAGACAGAAGTACTTGGAGGAGCCAGCTGCAGTAGTATCCGCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR GCA 90 bp TCTTGGGGCCTGATTCCTCATTCCCAGGTGCACAGTGCTCTCTACTaGTACCAGCAACCATTTCTATGGCAAGGGAAAGGCCTCAGATCC +
Preference number: 1 (lower is better)
Translates to: SWGLIPHSQVHSALY*YQQPFLWQGKGLRS
Trigger: GGATCTGAGGCCTTTCCCTTGCCATAGAAATGGTTGCTGGTAGCAGTAGAGAGCACTGTGCACCTGGGAATGAGGAATCAGGCCCCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR GCA 90 bp CTGGCAGTAAGACAAGGGCTAAGCCTCATAAGGAGTCTCTCCTACTaGATCAAGCTTGCCCCAAGCTTGGCTGGCCTTTCCTCTGCTGAT +
Preference number: 1 (lower is better)
Translates to: LAVRQGLSLIRSLSY*IKLAPSLAGLSSAD
Trigger: ATCAGCAGAGGAAAGGCCAGCCAAGCTTGGGGCAAGCTTGATGCAGTAGGAGAGACTCCTTATGAGGCTTAGCCCTTGTCTTACTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR GCA 90 bp ATTACAGAGATTCCTCCCAACAGAGGCCCTGAGATCTCCCCTGACTaGCACCCAAAGGATCCACACTTGCCTCTGATCAACCAGATTCAG +
Preference number: 1 (lower is better)
Translates to: ITEIPPNRGPEISPD*HPKDPHLPLINQIQ
Trigger: CTGAATCTGGTTGATCAGAGGCAAGTGTGGATCCTTTGGGTGGCAGTCAGGGGAGATCTCAGGGCCTCTGTTGGGAGGAATCTCTGTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR GCA 90 bp AGTACTTCTGTCTTGGGGCCTGATTCCTCATTCCCAGGTGCACAGTaGTCTCTACTGCTACCAGCAACCATTTCTATGGCAAGGGAAAGG +
Preference number: 1 (lower is better)
Translates to: STSVLGPDSSFPGAQ*SLLLPATISMARER
Trigger: CCTTTCCCTTGCCATAGAAATGGTTGCTGGTAGCAGTAGAGAGCACTGTGCACCTGGGAATGAGGAATCAGGCCCCAAGACAGAAGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR CCA 90 bp TGGCTGCCACCACCTTTTCTCTTAGGACTGGCTTGTCTCTCCCACTaGTGGCTGCAGAAGAGGAACAGAGTGAATATCATAAAGGAATGC +
Preference number: 1 (lower is better)
Translates to: WLPPPFLLGLACLSH*WLQKRNRVNIIKEC
Trigger: GCATTCCTTTATGATATTCACTCTGTTCCTCTTCTGCAGCCACCAGTGGGAGAGACAAGCCAGTCCTAAGAGAAAAGGTGGTGGCAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR TCA 90 bp GTGTCAATTCGGGCTGACGCTACCGTGCACGATCCCTCATTCATATaGCTTCTACATTCTGCTGTGAGGACAGACATGTCTGAGTGCTTT +
Preference number: 1 (lower is better)
Translates to: VSIRADATVHDPSFI*LLHSAVRTDMSECF
Trigger: AAAGCACTCAGACATGTCTGTCCTCACAGCAGAATGTAGAAGTCATATGAATGAGGGATCGTGCACGGTAGCGTCAGCCCGAATTGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR GCA 90 bp CTCATCTTGCCAACAGGGCCTCTATTGCACCGCCTAATATTGCACTaGTCGTTAGACACCATCTCACTTATCCATGTCACCAGTGTAAGC +
Preference number: 1 (lower is better)
Translates to: LILPTGPLLHRLILH*SLDTISLIHVTSVS
Trigger: GCTTACACTGGTGACATGGATAAGTGAGATGGTGTCTAACGAGCAGTGCAATATTAGGCGGTGCAATAGAGGCCCTGTTGGCAAGATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR CCA 90 bp CTGCCACCACCTTTTCTCTTAGGACTGGCTTGTCTCTCCCACTGGTaGCTGCAGAAGAGGAACAGAGTGAATATCATAAAGGAATGCTCA +
Preference number: 1 (lower is better)
Translates to: LPPPFLLGLACLSHW*LQKRNRVNIIKECS
Trigger: TGAGCATTCCTTTATGATATTCACTCTGTTCCTCTTCTGCAGCCACCAGTGGGAGAGACAAGCCAGTCCTAAGAGAAAAGGTGGTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR TCA 90 bp TTTCATAGAGGGCCACACATTCAGAGTTGTCGTGTCAATTCGGGCTaGCGCTACCGTGCACGATCCCTCATTCATATGACTTCTACATTC +
Preference number: 1 (lower is better)
Translates to: FHRGPHIQSCRVNSG*RYRARSLIHMTSTF
Trigger: GAATGTAGAAGTCATATGAATGAGGGATCGTGCACGGTAGCGTCAGCCCGAATTGACACGACAACTCTGAATGTGTGGCCCTCTATGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR GCA 90 bp AATATTTTCCATGTTTCCATGAGGTCCAAGCTCTTGCTTCATTTCTaGCAGCCACGCATCAAGGGCGTCAAAGGAGTCTTTCTGCCCAAC +
Preference number: 1 (lower is better)
Translates to: NIFHVSMRSKLLLHF*QPRIKGVKGVFLPN
Trigger: GTTGGGCAGAAAGACTCCTTTGACGCCCTTGATGCGTGGCTGGCAGAAATGAAGCAAGAGCTTGGACCTCATGGAAACATGGAAAATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380809.7
3UTR TCA 90 bp CTACCGTGCACGATCCCTCATTCATATGACTTCTACATTCTGCTGTaGGGACAGACATGTCTGAGTGCTTTCAGCATGATAAAGGCCTTC +
Preference number: 1 (lower is better)
Translates to: LPCTIPHSYDFYILL*GQTCLSAFSMIKAF
Trigger: GAAGGCCTTTATCATGCTGAAAGCACTCAGACATGTCTGTCCTCACAGCAGAATGTAGAAGTCATATGAATGAGGGATCGTGCACGGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR TCA 90 bp GCTTTGAAGGCATCTTCACTGCCAGGTGCTACACATTTGTCAGGGTaGAGAAGCACAGCAAGTTTCCGATACGCTTTATTGACTTCATCC +
Preference number: 1 (lower is better)
Translates to: ALKASSLPGATHLSG*RSTASFRYALLTSS
Trigger: GGATGAAGTCAATAAAGCGTATCGGAAACTTGCTGTGCTTCTTCACCCTGACAAATGTGTAGCACCTGGCAGTGAAGATGCCTTCAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380809.7
3UTR GCA 90 bp TTTCTACTTGATGTTTTTCAGGAGGGCTGTCCGAGCATTCACAACTaGTTTGAAGGCATCTTCACTGCCAGGTGCTACACATTTGTCAGG +
Preference number: 1 (lower is better)
Translates to: FLLDVFQEGCPSIHN*FEGIFTARCYTFVR
Trigger: CCTGACAAATGTGTAGCACCTGGCAGTGAAGATGCCTTCAAAGCAGTTGTGAATGCTCGGACAGCCCTCCTGAAAAACATCAAGTAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380809.7
ENST00000534855.5
3UTR GCA 90 bp TGCCTTCTCCAGTTTGTGCTGAAGTTTCAAAGTACAGGAACCCTTTaGTTTCAGCCCAAAGACGTCCTTCACTTTCATCTACACAGCGAT +
Preference number: 1 (lower is better)
Translates to: CLLQFVLKFQSTGTL*FQPKDVLHFHLHSD
Trigger: ATCGCTGTGTAGATGAAAGTGAAGGACGTCTTTGGGCTGAAAGCAAAGGGTTCCTGTACTTTGAAACTTCAGCACAAACTGGAGAAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380809.7
3UTR GCA 90 bp CATGTCCCAACTGTCTTTACTATTTCGAATTCTGCGAATGGCATCTaGTTGTTCTTTGGTGAAACTAGCACTGCTATTGGTGGTAGGGCG +
Preference number: 1 (lower is better)
Translates to: HVPTVFTISNSANGI*LFFGETSTAIGGRA
Trigger: CGCCCTACCACCAATAGCAGTGCTAGTTTCACCAAAGAACAAGCAGATGCCATTCGCAGAATTCGAAATAGTAAAGACAGTTGGGACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380809.7
3UTR TCA 90 bp GAGACTAGTTCTATAAGCACCGTAAGGAGTGCCAGTCCTAATACATaGACTTCATCCATCCCTTGTATATCAAGGAGGAGACTGTGGTCA +
Preference number: 1 (lower is better)
Translates to: ETSSISTVRSASPNT*TSSIPCISRRRLWS
Trigger: TGACCACAGTCTCCTCCTTGATATACAAGGGATGGATGAAGTTCATGTATTAGGACTGGCACTCCTTACGGTGCTTATAGAACTAGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR GCA 90 bp GGCATGAAGGGGAACAGAGGAACAGAAGGAGGCTGTATTTTAAAGTaGTTAGGTAGGTTAGAAGATGAATTTGAAATGCCTCCAGGGATT +
Preference number: 1 (lower is better)
Translates to: GMKGNRGTEGGCILK*LGRLEDEFEMPPGI
Trigger: AATCCCTGGAGGCATTTCAAATTCATCTTCTAACCTACCTAAGCACTTTAAAATACAGCCTCCTTCTGTTCCTCTGTTCCCCTTCATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR TCA 90 bp AAGATGTATCTGGAACATCTCATTAATGCCTTCTCCAGTTTGTGCTaGAGTTTCAAAGTACAGGAACCCTTTGCTTTCAGCCCAAAGACG +
Preference number: 1 (lower is better)
Translates to: KMYLEHLINAFSSLC*SFKVQEPFAFSPKT
Trigger: CGTCTTTGGGCTGAAAGCAAAGGGTTCCTGTACTTTGAAACTTCAGCACAAACTGGAGAAGGCATTAATGAGATGTTCCAGATACATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380809.7
3UTR TCA 90 bp AGAATCAAGCTCAGGCTAAATTTCACCAACTCACACATAAGGATATaGGTGGGAGCACTAATGAATTTTCTCTGCTGTAATTGCTCATCT +
Preference number: 1 (lower is better)
Translates to: RIKLRLNFTNSHIRI*VGALMNFLCCNCSS
Trigger: AGATGAGCAATTACAGCAGAGAAAATTCATTAGTGCTCCCACTCATATCCTTATGTGTGAGTTGGTGAAATTTAGCCTGAGCTTGATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR CAA 90 bp TACAGGCGGATACTACTGCAGCTGGCTCCTCCAAGTACTTCTGTCTaGGGGCCTGATTCCTCATTCCCAGGTGCACAGTGCTCTCTACTG +
Preference number: 2 (lower is better)
Translates to: YRRILLQLAPPSTSV*GPDSSFPGAQCSLL
Trigger: CAGTAGAGAGCACTGTGCACCTGGGAATGAGGAATCAGGCCCCAAGACAGAAGTACTTGGAGGAGCCAGCTGCAGTAGTATCCGCCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR TCA 90 bp CTGCTTTCACAGTTAAGGGGGAAGAACGCCCAGGGGCAATCAATGCAGGAAGCTTTCTGTCTTGGGGCCTaGTTCCTCATTCCCAGGTGC +
Preference number: 2 (lower is better)
Translates to: LLSQLRGKNAQGQSMQEAFCLGA*FLIPRC
Trigger: GCACCTGGGAATGAGGAATCAGGCCCCAAGACAGAA...AGCTTCCTGCATTGATTGCCCCTGGGCGTTCTTCCCCCTTAACTGTGAAAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR CCA 90 bp ACATTCAGAGTTGTCGTGTCAATTCGGGCTGACGCTACCGTGCACGATCCCTCAACTATGTTGCCCAGGTaGGACTTGAGCTCCTGGGCT +
Preference number: 2 (lower is better)
Translates to: TFRVVVSIRADATVHDPSTMLPR*DLSSWA
Trigger: AGCCCAGGAGCTCAAGTCCCACCTGGGCAACATAGT...TGAGGGATCGTGCACGGTAGCGTCAGCCCGAATTGACACGACAACTCTGAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR TCA 90 bp TGGGGTACAGTGGCAAAGGAGGTGACATTCCCATGCCTAGTGGAATTAGTTGTACGTGTCAATTCGGGCTaGCGCTACCGTGCACGATCC +
Preference number: 2 (lower is better)
Translates to: WGTVAKEVTFPCLVELVVRVNSG*RYRARS
Trigger: GGATCGTGCACGGTAGCGTCAGCCCGAATTGACACG...TACAACTAATTCCACTAGGCATGGGAATGTCACCTCCTTTGCCACTGTACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR CCA 90 bp CTGCTTTCACAGTTAAGGGGGAAGAACGCCCAGGGGCAATCAATGCAGGAAGCTTGTCTCTCCCACTGGTaGCTGCAGAAGAGGAACAGA +
Preference number: 2 (lower is better)
Translates to: LLSQLRGKNAQGQSMQEACLSHW*LQKRNR
Trigger: TCTGTTCCTCTTCTGCAGCCACCAGTGGGAGAGACA...AGCTTCCTGCATTGATTGCCCCTGGGCGTTCTTCCCCCTTAACTGTGAAAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR CCA 90 bp TGGGGCCTGATTCCTCATTCCCAGGTGCACAGTGCTCTCTACTGCTACCAGCAACAGCAACCATTTCTATaGCAAGGGAAAGGCCTCAGA +
Preference number: 2 (lower is better)
Translates to: WGLIPHSQVHSALYCYQQQQPFL*QGKGLR
Trigger: TCTGAGGCCTTTCCCTTGCCATAGAAATGGTTGCTG...TTGCTGGTAGCAGTAGAGAGCACTGTGCACCTGGGAATGAGGAATCAGGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR TCA 90 bp CTGCTTTCACAGTTAAGGGGGAAGAACGCCCAGGGGCAATCAATGCAGGAAGCTAAGAAACAACACTGGTaGGGAAGTGTAGAAGAGGCC +
Preference number: 2 (lower is better)
Translates to: LLSQLRGKNAQGQSMQEAKKQHW*GSVEEA
Trigger: GGCCTCTTCTACACTTCCTCACCAGTGTTGTTTCTT...AGCTTCCTGCATTGATTGCCCCTGGGCGTTCTTCCCCCTTAACTGTGAAAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR GCA 90 bp TGGGGTACAGTGGCAAAGGAGGTGACATTCCCATGCCTAGTGGAATTAGTTGTACTACTGCATCAAGCTTaGCCCAAGCTTGGCTGGCCT +
Preference number: 2 (lower is better)
Translates to: WGTVAKEVTFPCLVELVVLLHQA*PKLGWP
Trigger: AGGCCAGCCAAGCTTGGGGCAAGCTTGATGCAGTAG...TACAACTAATTCCACTAGGCATGGGAATGTCACCTCCTTTGCCACTGTACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR CAA 90 bp CTGTCCAGCTCTCCAGCAAAACTCATCTTGCCAACAGGGCCTCTATaGCACCGCCTAATATTGCACTGCTCGTTAGACACCATCTCACTT +
Preference number: 2 (lower is better)
Translates to: LSSSPAKLILPTGPL*HRLILHCSLDTISL
Trigger: AAGTGAGATGGTGTCTAACGAGCAGTGCAATATTAGGCGGTGCAATAGAGGCCCTGTTGGCAAGATGAGTTTTGCTGGAGAGCTGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR GCA 90 bp TGGGGTACAGTGGCAAAGGAGGTGACATTCCCATGCCTAGTGGAATTAGTTGTAAGGAGTCTCTCCTACTaGATCAAGCTTGCCCCAAGC +
Preference number: 2 (lower is better)
Translates to: WGTVAKEVTFPCLVELVVRSLSY*IKLAPS
Trigger: GCTTGGGGCAAGCTTGATGCAGTAGGAGAGACTCCT...TACAACTAATTCCACTAGGCATGGGAATGTCACCTCCTTTGCCACTGTACCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR GCA 90 bp CCAACAGGGCCTCTATTGCACCGCCTAATATTGCACTGCTCGTTAGACACCATCAGAGCTTGCAGTGGCTaGTTACTTACTCTGGCTATC +
Preference number: 2 (lower is better)
Translates to: PTGPLLHRLILHCSLDTIRACSG*LLTLAI
Trigger: GATAGCCAGAGTAAGTAAGCAGCCACTGCAAGCTCT...GATGGTGTCTAACGAGCAGTGCAATATTAGGCGGTGCAATAGAGGCCCTGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR CCA 90 bp ACATTCAGAGTTGTCGTGTCAATTCGGGCTGACGCTACCGTGCACGATCCCTCAAGAGCAGTGAGATTCTaGGAAGGAAAACTCCACGTT +
Preference number: 2 (lower is better)
Translates to: TFRVVVSIRADATVHDPSRAVRF*EGKLHV
Trigger: AACGTGGAGTTTTCCTTCCCAGAATCTCACTGCTCT...TGAGGGATCGTGCACGGTAGCGTCAGCCCGAATTGACACGACAACTCTGAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR CCA 90 bp GTAAGACGCGCACTGTCACTGTCAAAGGCAACAAGCACATGGCTTACAGCTCCACCTCCAGGAACCTTGTaGATTTCCCCAAGTGAAATG +
Preference number: 2 (lower is better)
Translates to: VRRALSLSKATSTWLTAPPPGTL*ISPSEM
Trigger: CATTTCACTTGGGGAAATCCACAAGGTTCCTGGAGG...TGGAGCTGTAAGCCATGTGCTTGTTGCCTTTGACAGTGACAGTGCGCGTCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR TCA 90 bp GGAAGAAAGTGGCTTTTCTTCTTAGGAGGTAAGGTAGATGCTCTTTGGCAATCGTTCTGTCTTGGGGCCTaGTTCCTCATTCCCAGGTGC +
Preference number: 2 (lower is better)
Translates to: GRKWLFFLGGKVDALWQSFCLGA*FLIPRC
Trigger: GCACCTGGGAATGAGGAATCAGGCCCCAAGACAGAA...CGATTGCCAAAGAGCATCTACCTTACCTCCTAAGAAGAAAAGCCACTTTCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR TCA 90 bp TGGGGTACAGTGGCAAAGGAGGTGACATTCCCATGCCTAGTGGAATTAGTTGTAATCCACACTTGCCTCTaGTCAACCAGATTCAGGCCA +
Preference number: 2 (lower is better)
Translates to: WGTVAKEVTFPCLVELVVIHTCL*STRFRP
Trigger: TGGCCTGAATCTGGTTGATCAGAGGCAAGTGTGGAT...TACAACTAATTCCACTAGGCATGGGAATGTCACCTCCTTTGCCACTGTACCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR GCA 90 bp TACAGTGGCAAAGGAGGTGACATTCCCATGCCTAGTGGAATTAGTTGTAAGACGTTCCCAGGTGCACAGTaGTCTCTACTGCTACCAGCA +
Preference number: 2 (lower is better)
Translates to: YSGKGGDIPMPSGISCKTFPGAQ*SLLLPA
Trigger: TGCTGGTAGCAGTAGAGAGCACTGTGCACCTGGGAA...CGTCTTACAACTAATTCCACTAGGCATGGGAATGTCACCTCCTTTGCCACTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR GCA 90 bp TGGGGTACAGTGGCAAAGGAGGTGACATTCCCATGCCTAGTGGAATTAGTTGTATTCCTCATTCCCAGGTaGACAGTGCTCTCTACTGCT +
Preference number: 2 (lower is better)
Translates to: WGTVAKEVTFPCLVELVVFLIPR*TVLSTA
Trigger: AGCAGTAGAGAGCACTGTGCACCTGGGAATGAGGAA...TACAACTAATTCCACTAGGCATGGGAATGTCACCTCCTTTGCCACTGTACCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR GCA 90 bp CACTGCTCGTTAGACACCATCTCACTTATCCATGTCACCAGTGTAAGCTTTTGTGAGATCTCCCCTGACTaGCACCCAAAGGATCCACAC +
Preference number: 2 (lower is better)
Translates to: HCSLDTISLIHVTSVSFCEISPD*HPKDPH
Trigger: GTGTGGATCCTTTGGGTGGCAGTCAGGGGAGATCTC...ACAAAAGCTTACACTGGTGACATGGATAAGTGAGATGGTGTCTAACGAGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR GCA 90 bp TACAGTGGCAAAGGAGGTGACATTCCCATGCCTAGTGGAATTAGTTGTAAGACGGGGCTGACGCTACCGTaGACGATCCCTCATTCATAT +
Preference number: 2 (lower is better)
Translates to: YSGKGGDIPMPSGISCKTGLTLP*TIPHSY
Trigger: ATATGAATGAGGGATCGTGCACGGTAGCGTCAGCCC...CGTCTTACAACTAATTCCACTAGGCATGGGAATGTCACCTCCTTTGCCACTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR CCA 90 bp GTAAGACGCGCACTGTCACTGTCAAAGGCAACAAGCACATGGCTTACAGCTCCAGATAAAGCAACGCTCTaGTTTCCTGAAGACAAGCTC +
Preference number: 2 (lower is better)
Translates to: VRRALSLSKATSTWLTAPDKATL*FPEDKL
Trigger: GAGCTTGTCTTCAGGAAACCAGAGCGTTGCTTTATC...TGGAGCTGTAAGCCATGTGCTTGTTGCCTTTGACAGTGACAGTGCGCGTCTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR CAA 90 bp GCAAAACTCATCTTGCCAACAGGGCCTCTATTGCACCGCCTAATATaGCACTGCTCGTTAGACACCATCTCACTTATCCATGTCACCAGT +
Preference number: 2 (lower is better)
Translates to: AKLILPTGPLLHRLI*HCSLDTISLIHVTS
Trigger: ACTGGTGACATGGATAAGTGAGATGGTGTCTAACGAGCAGTGCAATATTAGGCGGTGCAATAGAGGCCCTGTTGGCAAGATGAGTTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR TCA 90 bp ATGAGGTCCAAGCTCTTGCTTCATTTCTGCCAGCCACGCATCAAGGGCGTCAAAAAGTCTGTTTGCATTTaGGTCCCACATGTGGCTTTT +
Preference number: 2 (lower is better)
Translates to: MRSKLLLHFCQPRIKGVKKSVCI*VPHVAF
Trigger: AAAAGCCACATGTGGGACTCAAATGCAAACAGACTT...TTTGACGCCCTTGATGCGTGGCTGGCAGAAATGAAGCAAGAGCTTGGACCTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380809.7
3UTR-3UTR GCA 90 bp ACATTCAGAGTTGTCGTGTCAATTCGGGCTGACGCTACCGTGCACGATCCCTCATTTCCTCTGCTGATGTaGATAATCTTTAAGTGCGAC +
Preference number: 2 (lower is better)
Translates to: TFRVVVSIRADATVHDPSFPLLM*IIFKCD
Trigger: GTCGCACTTAAAGATTATGCACATCAGCAGAGGAAA...TGAGGGATCGTGCACGGTAGCGTCAGCCCGAATTGACACGACAACTCTGAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR GCA 90 bp ACATTCAGAGTTGTCGTGTCAATTCGGGCTGACGCTACCGTGCACGATCCCTCATACCAAGATGAAAAGTaGGATGATAAAGCAACGCTC +
Preference number: 2 (lower is better)
Translates to: TFRVVVSIRADATVHDPSYQDEK*DDKATL
Trigger: GAGCGTTGCTTTATCATCGCACTTTTCATCTTGGTA...TGAGGGATCGTGCACGGTAGCGTCAGCCCGAATTGACACGACAACTCTGAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR GCA 90 bp TCACAGTTAAGGGGGAAGAACGCCCAGGGGCAATCAATGCAGGAAGCTAACCAAACAGACATGTCTGAGTaGTTTCAGCATGATAAAGGC +
Preference number: 2 (lower is better)
Translates to: SQLRGKNAQGQSMQEANQTDMSE*FQHDKG
Trigger: GCCTTTATCATGCTGAAAGCACTCAGACATGTCTGT...TTGGTTAGCTTCCTGCATTGATTGCCCCTGGGCGTTCTTCCCCCTTAACTGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR CCA 90 bp CAGGAACCCTTTGCTTTCAGCCCAAAGACGTCCTTCACTTTCATCTACACAGCGAGAGCAGTGAGATTCTaGGAAGGAAAACTCCACGTT +
Preference number: 2 (lower is better)
Translates to: QEPFAFSPKTSFTFIYTARAVRF*EGKLHV
Trigger: AACGTGGAGTTTTCCTTCCCAGAATCTCACTGCTCT...CGCTGTGTAGATGAAAGTGAAGGACGTCTTTGGGCTGAAAGCAAAGGGTTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380809.7
3UTR-3UTR CCA 90 bp TTTACAAAACCTTTGATTCAGAGTAAGCTTGATGGGGTACAGTGGCAAAGGAGGACTATGTTGCCCAGGTaGGACTTGAGCTCCTGGGCT +
Preference number: 2 (lower is better)
Translates to: FTKPLIQSKLDGVQWQRRTMLPR*DLSSWA
Trigger: AGCCCAGGAGCTCAAGTCCCACCTGGGCAACATAGT...CCTCCTTTGCCACTGTACCCCATCAAGCTTACTCTGAATCAAAGGTTTTGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR CCA 90 bp TTGGAAACTGAGTCTCAAGACCTAAGAATCAAGCTCAGGCTAAATTTCACCAACAGCTTGCCCCAAGCTTaGCTGGCCTTTCCTCTGCTG +
Preference number: 2 (lower is better)
Translates to: LETESQDLRIKLRLNFTNSLPQA*LAFPLL
Trigger: CAGCAGAGGAAAGGCCAGCCAAGCTTGGGGCAAGCT...GTTGGTGAAATTTAGCCTGAGCTTGATTCTTAGGTCTTGAGACTCAGTTTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR CCA 90 bp CCCAGGGGCAATCAATGCAGGAAGCTAACCAACACTGTCCAGCTCTCCAGCAAATACTCTTCAGAAATTTaGAGCCCAAGCAGGAATTAC +
Preference number: 2 (lower is better)
Translates to: PRGNQCRKLTNTVQLSSKYSSEI*SPSRNY
Trigger: GTAATTCCTGCTTGGGCTCCAAATTTCTGAAGAGTA...TTTGCTGGAGAGCTGGACAGTGTTGGTTAGCTTCCTGCATTGATTGCCCCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR CCA 90 bp GTAAGACGCGCACTGTCACTGTCAAAGGCAACAAGCACATGGCTTACAGCTCCAAAGGTAGATGCTCTTTaGCAATCGATATGGGATAGC +
Preference number: 2 (lower is better)
Translates to: VRRALSLSKATSTWLTAPKVDAL*QSIWDS
Trigger: GCTATCCCATATCGATTGCCAAAGAGCATCTACCTT...TGGAGCTGTAAGCCATGTGCTTGTTGCCTTTGACAGTGACAGTGCGCGTCTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR TCA 90 bp GTGCTCTCTACTGCTACCAGCAACCATTTCTATGGCAAGGGAAAGGCCTCAGATAAGTCTGTTTGCATTTaGGTCCCACATGTGGCTTTT +
Preference number: 2 (lower is better)
Translates to: VLSTATSNHFYGKGKASDKSVCI*VPHVAF
Trigger: AAAAGCCACATGTGGGACTCAAATGCAAACAGACTT...ATCTGAGGCCTTTCCCTTGCCATAGAAATGGTTGCTGGTAGCAGTAGAGAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR TCA 90 bp ACTGTCAAAGGCAACAAGCACATGGCTTACAGCTCCACCTTTCTAACTTTTGGCCCTCCCTTCCCCTTGTaGTGTTGTCATTGTTCAATG +
Preference number: 2 (lower is better)
Translates to: TVKGNKHMAYSSTFLTFGPPFPL*CCHCSM
Trigger: CATTGAACAATGACAACATCACAAGGGGAAGGGAGG...GCCAAAAGTTAGAAAGGTGGAGCTGTAAGCCATGTGCTTGTTGCCTTTGACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR GCA 90 bp AATATTGCACTGCTCGTTAGACACCATCTCACTTATCCATGTCACCAGTGTAAGTTCCCAGGTGCACAGTaGTCTCTACTGCTACCAGCA +
Preference number: 2 (lower is better)
Translates to: NIALLVRHHLTYPCHQCKFPGAQ*SLLLPA
Trigger: TGCTGGTAGCAGTAGAGAGCACTGTGCACCTGGGAA...CTTACACTGGTGACATGGATAAGTGAGATGGTGTCTAACGAGCAGTGCAATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR CCA 90 bp TTTACAAAACCTTTGATTCAGAGTAAGCTTGATGGGGTACAGTGGCAAAGGAGGTGTCTCTCCCACTGGTaGCTGCAGAAGAGGAACAGA +
Preference number: 2 (lower is better)
Translates to: FTKPLIQSKLDGVQWQRRCLSHW*LQKRNR
Trigger: TCTGTTCCTCTTCTGCAGCCACCAGTGGGAGAGACA...CCTCCTTTGCCACTGTACCCCATCAAGCTTACTCTGAATCAAAGGTTTTGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR CCA 90 bp TACAGTGGCAAAGGAGGTGACATTCCCATGCCTAGTGGAATTAGTTGTAAGACGCGAAGAACTCTGGGTTaGAGTTCTGTAGCCTCAGAA +
Preference number: 2 (lower is better)
Translates to: YSGKGGDIPMPSGISCKTRRTLG*SSVASE
Trigger: TTCTGAGGCTACAGAACTCCAACCCAGAGTTCTTCG...CGTCTTACAACTAATTCCACTAGGCATGGGAATGTCACCTCCTTTGCCACTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR CAA 90 bp ATGCCTTCTCCAGTTTGTGCTGAAGTTTCAAAGTACAGGAACCCTTaGCTTTCAGCCCAAAGACGTCCTTCACTTTCATCTACACAGCGA +
Preference number: 2 (lower is better)
Translates to: MPSPVCAEVSKYRNP*LSAQRRPSLSSTQR
Trigger: TCGCTGTGTAGATGAAAGTGAAGGACGTCTTTGGGCTGAAAGCAAAGGGTTCCTGTACTTTGAAACTTCAGCACAAACTGGAGAAGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380809.7
3UTR CAA 90 bp CTGCGAATGGCATCTGCTTGTTCTTTGGTGAAACTAGCACTGCTATaGGTGGTAGGGCGTTTCCCGCCATTTTCACATAAATCAACTATG +
Preference number: 2 (lower is better)
Translates to: LRMASACSLVKLALL*VVGRFPPFSHKSTM
Trigger: CATAGTTGATTTATGTGAAAATGGCGGGAAACGCCCTACCACCAATAGCAGTGCTAGTTTCACCAAAGAACAAGCAGATGCCATTCGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380809.7
3UTR-3UTR TCA 90 bp GTCTCAAGACCTAAGAATCAAGCTCAGGCTAAATTTCACCAACTCACACATAAGAACGCTCTGGTTTCCTaGAGACAAGCTCAGTGCAGC +
Preference number: 2 (lower is better)
Translates to: VSRPKNQAQAKFHQLTHKNALVS*RQAQCS
Trigger: GCTGCACTGAGCTTGTCTTCAGGAAACCAGAGCGTT...CTTATGTGTGAGTTGGTGAAATTTAGCCTGAGCTTGATTCTTAGGTCTTGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR TCA 90 bp CACTGCTCGTTAGACACCATCTCACTTATCCATGTCACCAGTGTAAGCTTTTGTCCTCCCTTCCCCTTGTaGTGTTGTCATTGTTCAATG +
Preference number: 2 (lower is better)
Translates to: HCSLDTISLIHVTSVSFCPPFPL*CCHCSM
Trigger: CATTGAACAATGACAACATCACAAGGGGAAGGGAGG...ACAAAAGCTTACACTGGTGACATGGATAAGTGAGATGGTGTCTAACGAGCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR TCA 90 bp CACTGCTCGTTAGACACCATCTCACTTATCCATGTCACCAGTGTAAGCTTTTGTCATTCACAACTGCTTTaGAGGCATCTTCACTGCCAG +
Preference number: 2 (lower is better)
Translates to: HCSLDTISLIHVTSVSFCHSQLL*RHLHCQ
Trigger: CTGGCAGTGAAGATGCCTTCAAAGCAGTTGTGAATG...ACAAAAGCTTACACTGGTGACATGGATAAGTGAGATGGTGTCTAACGAGCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534855.5
3UTR-3UTR GCA 90 bp TGGGGTACAGTGGCAAAGGAGGTGACATTCCCATGCCTAGTGGAATTAGTTGTAATGACTTCTACATTCTaGTGTGAGGACAGACATGTC +
Preference number: 2 (lower is better)
Translates to: WGTVAKEVTFPCLVELVVMTSTF*CEDRHV
Trigger: GACATGTCTGTCCTCACAGCAGAATGTAGAAGTCAT...TACAACTAATTCCACTAGGCATGGGAATGTCACCTCCTTTGCCACTGTACCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR GCA 90 bp CTGCTTTCACAGTTAAGGGGGAAGAACGCCCAGGGGCAATCAATGCAGGAAGCTCTAATGAATTTTCTCTaGTGTAATTGCTCATCTGTG +
Preference number: 2 (lower is better)
Translates to: LLSQLRGKNAQGQSMQEALMNFL*CNCSSV
Trigger: CACAGATGAGCAATTACAGCAGAGAAAATTCATTAG...AGCTTCCTGCATTGATTGCCCCTGGGCGTTCTTCCCCCTTAACTGTGAAAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR GCA 90 bp TGTCCCAACTGTCTTTACTATTTCGAATTCTGCGAATGGCATCTGCTTGTTCTTCTCTTGCTTCATTTCTaGCAGCCACGCATCAAGGGC +
Preference number: 2 (lower is better)
Translates to: CPNCLYYFEFCEWHLLVLLLLHF*QPRIKG
Trigger: GCCCTTGATGCGTGGCTGGCAGAAATGAAGCAAGAG...AAGAACAAGCAGATGCCATTCGCAGAATTCGAAATAGTAAAGACAGTTGGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380809.7
3UTR-3UTR GCA 90 bp TACAGTGGCAAAGGAGGTGACATTCCCATGCCTAGTGGAATTAGTTGTAAGACGCCGAGCATTCACAACTaGTTTGAAGGCATCTTCACT +
Preference number: 2 (lower is better)
Translates to: YSGKGGDIPMPSGISCKTPSIHN*FEGIFT
Trigger: AGTGAAGATGCCTTCAAAGCAGTTGTGAATGCTCGG...CGTCTTACAACTAATTCCACTAGGCATGGGAATGTCACCTCCTTTGCCACTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534855.5
3UTR-3UTR CCA 90 bp ACTGTCAAAGGCAACAAGCACATGGCTTACAGCTCCACCTTTCTAACTTTTGGCAGAGCAGTGAGATTCTaGGAAGGAAAACTCCACGTT +
Preference number: 2 (lower is better)
Translates to: TVKGNKHMAYSSTFLTFGRAVRF*EGKLHV
Trigger: AACGTGGAGTTTTCCTTCCCAGAATCTCACTGCTCT...GCCAAAAGTTAGAAAGGTGGAGCTGTAAGCCATGTGCTTGTTGCCTTTGACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR CCA 90 bp GAAGTACAGGGTGTGACGCTCAGTTCACTTCATACAAATGCAGGTCATTTCTCACCTCCAGGAACCTTGTaGATTTCCCCAAGTGAAATG +
Preference number: 2 (lower is better)
Translates to: EVQGVTLSSLHTNAGHFSPPGTL*ISPSEM
Trigger: CATTTCACTTGGGGAAATCCACAAGGTTCCTGGAGG...TGAGAAATGACCTGCATTTGTATGAAGTGAACTGAGCGTCACACCCTGTACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR CCA 90 bp CACTGCTCGTTAGACACCATCTCACTTATCCATGTCACCAGTGTAAGCTTTTGTCAGCAACCATTTCTATaGCAAGGGAAAGGCCTCAGA +
Preference number: 2 (lower is better)
Translates to: HCSLDTISLIHVTSVSFCQQPFL*QGKGLR
Trigger: TCTGAGGCCTTTCCCTTGCCATAGAAATGGTTGCTG...ACAAAAGCTTACACTGGTGACATGGATAAGTGAGATGGTGTCTAACGAGCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR CCA 90 bp CCAACAGGGCCTCTATTGCACCGCCTAATATTGCACTGCTCGTTAGACACCATCAATGACCCCCAAGTCTaGATTTTTAAATTAACAGGC +
Preference number: 2 (lower is better)
Translates to: PTGPLLHRLILHCSLDTINDPQV*IFKLTG
Trigger: GCCTGTTAATTTAAAAATCCAGACTTGGGGGTCATT...GATGGTGTCTAACGAGCAGTGCAATATTAGGCGGTGCAATAGAGGCCCTGTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR CAA 90 bp GTCCCAACTGTCTTTACTATTTCGAATTCTGCGAATGGCATCTGCTaGTTCTTTGGTGAAACTAGCACTGCTATTGGTGGTAGGGCGTTT +
Preference number: 2 (lower is better)
Translates to: VPTVFTISNSANGIC*FFGETSTAIGGRAF
Trigger: AAACGCCCTACCACCAATAGCAGTGCTAGTTTCACCAAAGAACAAGCAGATGCCATTCGCAGAATTCGAAATAGTAAAGACAGTTGGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380809.7
3UTR-3UTR GCA 90 bp GGAAGAAAGTGGCTTTTCTTCTTAGGAGGTAAGGTAGATGCTCTTTGGCAATCGCACAGTGCTCTCTACTaGTACCAGCAACCATTTCTA +
Preference number: 2 (lower is better)
Translates to: GRKWLFFLGGKVDALWQSHSALY*YQQPFL
Trigger: TAGAAATGGTTGCTGGTAGCAGTAGAGAGCACTGTG...CGATTGCCAAAGAGCATCTACCTTACCTCCTAAGAAGAAAAGCCACTTTCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR GCA 90 bp GTAAGACGCGCACTGTCACTGTCAAAGGCAACAAGCACATGGCTTACAGCTCCAATGTCTGTGAAATTCTaGATGAAGTTAGTGCCAAAA +
Preference number: 2 (lower is better)
Translates to: VRRALSLSKATSTWLTAPMSVKF*MKLVPK
Trigger: TTTTGGCACTAACTTCATGCAGAATTTCACAGACAT...TGGAGCTGTAAGCCATGTGCTTGTTGCCTTTGACAGTGACAGTGCGCGTCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR GCA 90 bp ACATTTGTCAGGGTGAAGAAGCACAGCAAGTTTCCGATACGCTTTATTGACTTCAGTACAGGAACCCTTTaGTTTCAGCCCAAAGACGTC +
Preference number: 2 (lower is better)
Translates to: TFVRVKKHSKFPIRFIDFSTGTL*FQPKDV
Trigger: GACGTCTTTGGGCTGAAAGCAAAGGGTTCCTGTACT...GAAGTCAATAAAGCGTATCGGAAACTTGCTGTGCTTCTTCACCCTGACAAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380809.7
3UTR-3UTR CCA 90 bp TTTACAAAACCTTTGATTCAGAGTAAGCTTGATGGGGTACAGTGGCAAAGGAGGAAGGCAACAAGCACATaGCTTACAGCTCCACCTTTC +
Preference number: 2 (lower is better)
Translates to: FTKPLIQSKLDGVQWQRRKATST*LTAPPF
Trigger: GAAAGGTGGAGCTGTAAGCCATGTGCTTGTTGCCTT...CCTCCTTTGCCACTGTACCCCATCAAGCTTACTCTGAATCAAAGGTTTTGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR TCA 90 bp ACATTTGTCAGGGTGAAGAAGCACAGCAAGTTTCCGATACGCTTTATTGACTTCATGAAGTACAGGGTGTaGCGCTCAGTTCACTTCATA +
Preference number: 2 (lower is better)
Translates to: TFVRVKKHSKFPIRFIDFMKYRV*RSVHFI
Trigger: TATGAAGTGAACTGAGCGTCACACCCTGTACTTCAT...GAAGTCAATAAAGCGTATCGGAAACTTGCTGTGCTTCTTCACCCTGACAAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380809.7
3UTR-3UTR TCA 90 bp TTGGAAACTGAGTCTCAAGACCTAAGAATCAAGCTCAGGCTAAATTTCACCAACAAGAAACAACACTGGTaGGGAAGTGTAGAAGAGGCC +
Preference number: 2 (lower is better)
Translates to: LETESQDLRIKLRLNFTNKKQHW*GSVEEA
Trigger: GGCCTCTTCTACACTTCCTCACCAGTGTTGTTTCTT...GTTGGTGAAATTTAGCCTGAGCTTGATTCTTAGGTCTTGAGACTCAGTTTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR TCA 90 bp CACTGCTCGTTAGACACCATCTCACTTATCCATGTCACCAGTGTAAGCTTTTGTGAAGGTGTTGGAAACTaGGTCTCAAGACCTAAGAAT +
Preference number: 2 (lower is better)
Translates to: HCSLDTISLIHVTSVSFCEGVGN*VSRPKN
Trigger: ATTCTTAGGTCTTGAGACTCAGTTTCCAACACCTTC...ACAAAAGCTTACACTGGTGACATGGATAAGTGAGATGGTGTCTAACGAGCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR TCA 90 bp CACATGAATGAAAAGAGCAGTGAGATTCTGGGAAGGAAAACTCCACGTTGGTTATTTTCCATGTTTCCATaGGGTCCAAGCTCTTGCTTC +
Preference number: 2 (lower is better)
Translates to: HMNEKSSEILGRKTPRWLFSMFP*GPSSCF
Trigger: GAAGCAAGAGCTTGGACCTCATGGAAACATGGAAAA...TAACCAACGTGGAGTTTTCCTTCCCAGAATCTCACTGCTCTTTTCATTCATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380809.7
3UTR-3UTR TCA 90 bp CACTGCTCGTTAGACACCATCTCACTTATCCATGTCACCAGTGTAAGCTTTTGTTCTGTACTTTCTACTTaGTGTTTTTCAGGAGGGCTG +
Preference number: 2 (lower is better)
Translates to: HCSLDTISLIHVTSVSFCSVLST*CFSGGL
Trigger: CAGCCCTCCTGAAAAACATCAAGTAGAAAGTACAGA...ACAAAAGCTTACACTGGTGACATGGATAAGTGAGATGGTGTCTAACGAGCAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534855.5
3UTR-3UTR GCA 90 bp GGTATATGGCCATTCTTAACATTAATAATGAAGGTGTTGGAAACTGAGTCTCAACTACTGCATCAAGCTTaGCCCAAGCTTGGCTGGCCT +
Preference number: 2 (lower is better)
Translates to: GIWPFLTLIMKVLETESQLLHQA*PKLGWP
Trigger: AGGCCAGCCAAGCTTGGGGCAAGCTTGATGCAGTAG...TTGAGACTCAGTTTCCAACACCTTCATTATTAATGTTAAGAATGGCCATATACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR GCA 90 bp GTCTCAAGACCTAAGAATCAAGCTCAGGCTAAATTTCACCAACTCACACATAAGGAAAATCCACAAGGCTaGAGTGGGCTTGGATTGGAA +
Preference number: 2 (lower is better)
Translates to: VSRPKNQAQAKFHQLTHKENPQG*SGLGLE
Trigger: TTCCAATCCAAGCCCACTGCAGCCTTGTGGATTTTC...CTTATGTGTGAGTTGGTGAAATTTAGCCTGAGCTTGATTCTTAGGTCTTGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR GCA 90 bp CACTGCTCGTTAGACACCATCTCACTTATCCATGTCACCAGTGTAAGCTTTTGTATGACTTCTACATTCTaGTGTGAGGACAGACATGTC +
Preference number: 2 (lower is better)
Translates to: HCSLDTISLIHVTSVSFCMTSTF*CEDRHV
Trigger: GACATGTCTGTCCTCACAGCAGAATGTAGAAGTCAT...ACAAAAGCTTACACTGGTGACATGGATAAGTGAGATGGTGTCTAACGAGCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR CCA 90 bp TACAGTGGCAAAGGAGGTGACATTCCCATGCCTAGTGGAATTAGTTGTAAGACGTACTCTTCAGAAATTTaGAGCCCAAGCAGGAATTAC +
Preference number: 2 (lower is better)
Translates to: YSGKGGDIPMPSGISCKTYSSEI*SPSRNY
Trigger: GTAATTCCTGCTTGGGCTCCAAATTTCTGAAGAGTA...CGTCTTACAACTAATTCCACTAGGCATGGGAATGTCACCTCCTTTGCCACTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR TCA 90 bp TCGTTAGACACCATCTCACTTATCCATGTCACCAGTGTAAGCTTTTGTCTTCTCAAGTCTGTTTGCATTTaGGTCCCACATGTGGCTTTT +
Preference number: 2 (lower is better)
Translates to: SLDTISLIHVTSVSFCLLKSVCI*VPHVAF
Trigger: AAAAGCCACATGTGGGACTCAAATGCAAACAGACTT...GAGAAGACAAAAGCTTACACTGGTGACATGGATAAGTGAGATGGTGTCTAACGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR GCA 90 bp TTGGAAACTGAGTCTCAAGACCTAAGAATCAAGCTCAGGCTAAATTTCACCAACCACAGTGCTCTCTACTaGTACCAGCAACCATTTCTA +
Preference number: 2 (lower is better)
Translates to: LETESQDLRIKLRLNFTNHSALY*YQQPFL
Trigger: TAGAAATGGTTGCTGGTAGCAGTAGAGAGCACTGTG...GTTGGTGAAATTTAGCCTGAGCTTGATTCTTAGGTCTTGAGACTCAGTTTCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR GCA 90 bp AATATTGCACTGCTCGTTAGACACCATCTCACTTATCCATGTCACCAGTGTAAGGAGGTGACATTCCCATaGCTAGTGGAATTAGTTGTA +
Preference number: 2 (lower is better)
Translates to: NIALLVRHHLTYPCHQCKEVTFP*LVELVV
Trigger: TACAACTAATTCCACTAGGCATGGGAATGTCACCTC...CTTACACTGGTGACATGGATAAGTGAGATGGTGTCTAACGAGCAGTGCAATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR CCA 90 bp CTTGTATATCAAGGAGGAGACTGTGGTCAGAGAATGTATTTTGTAAGCTATAGTTTTCTCACCTGCCTGTaGCAAAGGCTGGCAGTAAGA +
Preference number: 2 (lower is better)
Translates to: LVYQGGDCGQRMYFVSYSFLTCL*QRLAVR
Trigger: TCTTACTGCCAGCCTTTGCCACAGGCAGGTGAGAAA...ACTATAGCTTACAAAATACATTCTCTGACCACAGTCTCCTCCTTGATATACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR CCA 90 bp CTAAATACCAATTATGAGAAGTACGAACCTCTCTTCACTTTGCAAAGCTTGCAAAGGCTGCAGTGGGCTTaGATTGGAAGAAAGTGGCTT +
Preference number: 2 (lower is better)
Translates to: LNTNYEKYEPLFTLQSLQRLQWA*IGRKWL
Trigger: AAGCCACTTTCTTCCAATCCAAGCCCACTGCAGCCT...TTGCAAGCTTTGCAAAGTGAAGAGAGGTTCGTACTTCTCATAATTGGTATTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR CCA 90 bp TTGGAAACTGAGTCTCAAGACCTAAGAATCAAGCTCAGGCTAAATTTCACCAACGATAAAGCAACGCTCTaGTTTCCTGAAGACAAGCTC +
Preference number: 2 (lower is better)
Translates to: LETESQDLRIKLRLNFTNDKATL*FPEDKL
Trigger: GAGCTTGTCTTCAGGAAACCAGAGCGTTGCTTTATC...GTTGGTGAAATTTAGCCTGAGCTTGATTCTTAGGTCTTGAGACTCAGTTTCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR TCA 90 bp TGGTGGCTGCAGAAGAGGAACAGAGTGAATATCATAAAGGAATGCTCAATTCAGAACTTACAGGGGTTCTaGTGTTGTTTGCTTCCATTT +
Preference number: 2 (lower is better)
Translates to: WWLQKRNRVNIIKECSIQNLQGF*CCLLPF
Trigger: AAATGGAAGCAAACAACATCAGAACCCCTGTAAGTT...CTGAATTGAGCATTCCTTTATGATATTCACTCTGTTCCTCTTCTGCAGCCACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR CCA 90 bp TGGATTGGAAGAAAGTGGCTTTTCTTCTTAGGAGGTAAGGTAGATGCTCTTTGGTCAAGGAGGAGACTGTaGTCAGAGAATGTATTTTGT +
Preference number: 2 (lower is better)
Translates to: WIGRKWLFFLGGKVDALWSRRRL*SENVFC
Trigger: ACAAAATACATTCTCTGACCACAGTCTCCTCCTTGA...CCAAAGAGCATCTACCTTACCTCCTAAGAAGAAAAGCCACTTTCTTCCAATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR TCA 90 bp TGCTTAGGTAGGTTAGAAGATGAATTTGAAATGCCTCCAGGGATTTCTAACAAGTGCAATACGGCTGAATaGGGTTCCCAATCTAGTATT +
Preference number: 2 (lower is better)
Translates to: CLGRLEDEFEMPPGISNKCNTAE*GSQSSI
Trigger: AATACTAGATTGGGAACCTCATTCAGCCGTATTGCA...CTTGTTAGAAATCCCTGGAGGCATTTCAAATTCATCTTCTAACCTACCTAAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR TCA 90 bp GGTATATGGCCATTCTTAACATTAATAATGAAGGTGTTGGAAACTGAGTCTCAAATGAAGTACAGGGTGTaGCGCTCAGTTCACTTCATA +
Preference number: 2 (lower is better)
Translates to: GIWPFLTLIMKVLETESQMKYRV*RSVHFI
Trigger: TATGAAGTGAACTGAGCGTCACACCCTGTACTTCAT...TTGAGACTCAGTTTCCAACACCTTCATTATTAATGTTAAGAATGGCCATATACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR TCA 90 bp CTAAATACCAATTATGAGAAGTACGAACCTCTCTTCACTTTGCAAAGCTTGCAAGAAGGTGTTGGAAACTaGGTCTCAAGACCTAAGAAT +
Preference number: 2 (lower is better)
Translates to: LNTNYEKYEPLFTLQSLQEGVGN*VSRPKN
Trigger: ATTCTTAGGTCTTGAGACTCAGTTTCCAACACCTTC...TTGCAAGCTTTGCAAAGTGAAGAGAGGTTCGTACTTCTCATAATTGGTATTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR CAA 90 bp ATTGTGCTAAATACCAATTATGAGAAGTACGAACCTCTCTTCACTTaGCAAAGCTTGCAATGGAAAGTGGTTAGCTATATTTTGCAGCTA +
Preference number: 2 (lower is better)
Translates to: IVLNTNYEKYEPLFT*QSLQWKVVSYILQL
Trigger: TAGCTGCAAAATATAGCTAACCACTTTCCATTGCAAGCTTTGCAAAGTGAAGAGAGGTTCGTACTTCTCATAATTGGTATTTAGCACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR CAA 90 bp GAAATGCCTCCAGGGATTTCTAACAAGTTTAAAAAGTGTTACTTCTaGGTGACTCAGATGTTGAAGACATGGCTTTTCTTTAATAATAGC +
Preference number: 2 (lower is better)
Translates to: EMPPGISNKFKKCYF*VTQMLKTWLFFNNS
Trigger: GCTATTATTAAAGAAAAGCCATGTCTTCAACATCTGAGTCACCAAGAAGTAACACTTTTTAAACTTGTTAGAAATCCCTGGAGGCATTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR CAA 90 bp AATACCAATTATGAGAAGTACGAACCTCTCTTCACTTTGCAAAGCTaGCAATGGAAAGTGGTTAGCTATATTTTGCAGCTAAGTTCATTT +
Preference number: 2 (lower is better)
Translates to: NTNYEKYEPLFTLQS*QWKVVSYILQLSSF
Trigger: AAATGAACTTAGCTGCAAAATATAGCTAACCACTTTCCATTGCAAGCTTTGCAAAGTGAAGAGAGGTTCGTACTTCTCATAATTGGTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR CAA 90 bp CCCAGGGGCAATCAATGCAGGAAGCTAACCAACACTGTCCAGCTCTCCAGCAAACCTACTGCATCAAGCTaGCCCCAAGCTTGGCTGGCC +
Preference number: 3 (lower is better)
Translates to: PRGNQCRKLTNTVQLSSKPTASS*PQAWLA
Trigger: GGCCAGCCAAGCTTGGGGCAAGCTTGATGCAGTAGG...TTTGCTGGAGAGCTGGACAGTGTTGGTTAGCTTCCTGCATTGATTGCCCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR GCA 72 bp ATTCCTCCCAACAGAGGCCCTGAGATCTCCCCTGACTaGCACCCAAAGGATCCACACTTGCCTCTGATCAAC +
Preference number: 3 (lower is better)
Translates to: IPPNRGPEISPD*HPKDPHLPLIN
Trigger: GTTGATCAGAGGCAAGTGTGGATCCTTTGGGTGGCAGTCAGGGGAGATCTCAGGGCCTCTGTTGGGAGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR CAA 90 bp ACATTCAGAGTTGTCGTGTCAATTCGGGCTGACGCTACCGTGCACGATCCCTCATCTCTTAGGACTGGCTaGTCTCTCCCACTGGTGGCT +
Preference number: 3 (lower is better)
Translates to: TFRVVVSIRADATVHDPSSLRTG*SLPLVA
Trigger: AGCCACCAGTGGGAGAGACAAGCCAGTCCTAAGAGA...TGAGGGATCGTGCACGGTAGCGTCAGCCCGAATTGACACGACAACTCTGAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR GCA 72 bp AGACAAGGGCTAAGCCTCATAAGGAGTCTCTCCTACTaGATCAAGCTTGCCCCAAGCTTGGCTGGCCTTTCC +
Preference number: 3 (lower is better)
Translates to: RQGLSLIRSLSY*IKLAPSLAGLS
Trigger: GGAAAGGCCAGCCAAGCTTGGGGCAAGCTTGATGCAGTAGGAGAGACTCCTTATGAGGCTTAGCCCTTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR CAA 90 bp CCAACAGGGCCTCTATTGCACCGCCTAATATTGCACTGCTCGTTAGACACCATCTCTCTTAGGACTGGCTaGTCTCTCCCACTGGTGGCT +
Preference number: 3 (lower is better)
Translates to: PTGPLLHRLILHCSLDTISLRTG*SLPLVA
Trigger: AGCCACCAGTGGGAGAGACAAGCCAGTCCTAAGAGA...GATGGTGTCTAACGAGCAGTGCAATATTAGGCGGTGCAATAGAGGCCCTGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR TCA 72 bp GGGCCACACATTCAGAGTTGTCGTGTCAATTCGGGCTaGCGCTACCGTGCACGATCCCTCATTCATATGACT +
Preference number: 3 (lower is better)
Translates to: GPHIQSCRVNSG*RYRARSLIHMT
Trigger: AGTCATATGAATGAGGGATCGTGCACGGTAGCGTCAGCCCGAATTGACACGACAACTCTGAATGTGTGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR GCA 72 bp GTCTTGGGGCCTGATTCCTCATTCCCAGGTGCACAGTaGTCTCTACTGCTACCAGCAACCATTTCTATGGCA +
Preference number: 3 (lower is better)
Translates to: VLGPDSSFPGAQ*SLLLPATISMA
Trigger: TGCCATAGAAATGGTTGCTGGTAGCAGTAGAGAGCACTGTGCACCTGGGAATGAGGAATCAGGCCCCAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR CAA 90 bp TCACAGTTAAGGGGGAAGAACGCCCAGGGGCAATCAATGCAGGAAGCTAACCAACCAACAGGGCCTCTATaGCACCGCCTAATATTGCAC +
Preference number: 3 (lower is better)
Translates to: SQLRGKNAQGQSMQEANQPTGPL*HRLILH
Trigger: GTGCAATATTAGGCGGTGCAATAGAGGCCCTGTTGG...TTGGTTAGCTTCCTGCATTGATTGCCCCTGGGCGTTCTTCCCCCTTAACTGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR CAA 90 bp TCTTGGGGCCTGATTCCTCATTCCCAGGTGCACAGTGCTCTCTACTGCTACCAGAAGGAAAACTCCACGTaGGTTATTTCACCTCTAGGG +
Preference number: 3 (lower is better)
Translates to: SWGLIPHSQVHSALYCYQKENST*VISPLG
Trigger: CCCTAGAGGTGAAATAACCAACGTGGAGTTTTCCTT...CTGGTAGCAGTAGAGAGCACTGTGCACCTGGGAATGAGGAATCAGGCCCCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR CAA 90 bp GTCTCTCCTACTGCATCAAGCTTGCCCCAAGCTTGGCTGGCCTTTCCTCTGCTGTGTAAAAGCAGCAACTaGTCTGTAAGGTCACACCAA +
Preference number: 3 (lower is better)
Translates to: VSPTASSLPQAWLAFPLLCKSSN*SVRSHQ
Trigger: TTGGTGTGACCTTACAGACAAGTTGCTGCTTTTACA...CAGCAGAGGAAAGGCCAGCCAAGCTTGGGGCAAGCTTGATGCAGTAGGAGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR CAA 90 bp GAGTTGTCGTGTCAATTCGGGCTGACGCTACCGTGCACGATCCCTCATTCATATCCAAGTACTTCTGTCTaGGGGCCTGATTCCTCATTC +
Preference number: 3 (lower is better)
Translates to: ELSCQFGLTLPCTIPHSYPSTSV*GPDSSF
Trigger: GAATGAGGAATCAGGCCCCAAGACAGAAGTACTTGG...ATATGAATGAGGGATCGTGCACGGTAGCGTCAGCCCGAATTGACACGACAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR CAA 90 bp CTGCTTTCACAGTTAAGGGGGAAGAACGCCCAGGGGCAATCAATGCAGGAAGCTCCAAAGGATCCACACTaGCCTCTGATCAACCAGATT +
Preference number: 3 (lower is better)
Translates to: LLSQLRGKNAQGQSMQEAPKDPH*PLINQI
Trigger: AATCTGGTTGATCAGAGGCAAGTGTGGATCCTTTGG...AGCTTCCTGCATTGATTGCCCCTGGGCGTTCTTCCCCCTTAACTGTGAAAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR TCA 72 bp CGGGCTGACGCTACCGTGCACGATCCCTCATTCATATaGCTTCTACATTCTGCTGTGAGGACAGACATGTCT +
Preference number: 3 (lower is better)
Translates to: RADATVHDPSFI*LLHSAVRTDMS
Trigger: AGACATGTCTGTCCTCACAGCAGAATGTAGAAGTCATATGAATGAGGGATCGTGCACGGTAGCGTCAGCCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR CCA 72 bp CACAGTGCTCTCTACTGCTACCAGCAACCATTTCTATaGCAAGGGAAAGGCCTCAGATCCAGGGACAGGATA +
Preference number: 3 (lower is better)
Translates to: HSALYCYQQPFL*QGKGLRSRDRI
Trigger: TATCCTGTCCCTGGATCTGAGGCCTTTCCCTTGCCATAGAAATGGTTGCTGGTAGCAGTAGAGAGCACTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR CCA 72 bp GGAGTCTCTCCTACTGCATCAAGCTTGCCCCAAGCTTaGCTGGCCTTTCCTCTGCTGATGTGCATAATCTTT +
Preference number: 3 (lower is better)
Translates to: GVSPTASSLPQA*LAFPLLMCIIF
Trigger: AAAGATTATGCACATCAGCAGAGGAAAGGCCAGCCAAGCTTGGGGCAAGCTTGATGCAGTAGGAGAGACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR CAA 90 bp GTCTCTCCTACTGCATCAAGCTTGCCCCAAGCTTGGCTGGCCTTTCCTCTGCTGACAGGGGTTCTGATGTaGTTTGCTTCCATTTTTGTT +
Preference number: 3 (lower is better)
Translates to: VSPTASSLPQAWLAFPLLTGVLM*FASIFV
Trigger: AACAAAAATGGAAGCAAACAACATCAGAACCCCTGT...CAGCAGAGGAAAGGCCAGCCAAGCTTGGGGCAAGCTTGATGCAGTAGGAGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR CAA 90 bp TCACAGTTAAGGGGGAAGAACGCCCAGGGGCAATCAATGCAGGAAGCTAACCAATGCAGTGGGCTTGGATaGGAAGAAAGTGGCTTTTCT +
Preference number: 3 (lower is better)
Translates to: SQLRGKNAQGQSMQEANQCSGLG*EESGFS
Trigger: AGAAAAGCCACTTTCTTCCAATCCAAGCCCACTGCA...TTGGTTAGCTTCCTGCATTGATTGCCCCTGGGCGTTCTTCCCCCTTAACTGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR CAA 90 bp TCACAGTTAAGGGGGAAGAACGCCCAGGGGCAATCAATGCAGGAAGCTAACCAACTTCCCCTTGTGATGTaGTCATTGTTCAATGGGGCA +
Preference number: 3 (lower is better)
Translates to: SQLRGKNAQGQSMQEANQLPLVM*SLFNGA
Trigger: TGCCCCATTGAACAATGACAACATCACAAGGGGAAG...TTGGTTAGCTTCCTGCATTGATTGCCCCTGGGCGTTCTTCCCCCTTAACTGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR GCA 72 bp CCAACAGGGCCTCTATTGCACCGCCTAATATTGCACTaGTCGTTAGACACCATCTCACTTATCCATGTCACC +
Preference number: 3 (lower is better)
Translates to: PTGPLLHRLILH*SLDTISLIHVT
Trigger: GGTGACATGGATAAGTGAGATGGTGTCTAACGAGCAGTGCAATATTAGGCGGTGCAATAGAGGCCCTGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR GCA 72 bp CATGTTTCCATGAGGTCCAAGCTCTTGCTTCATTTCTaGCAGCCACGCATCAAGGGCGTCAAAGGAGTCTTT +
Preference number: 3 (lower is better)
Translates to: HVSMRSKLLLHF*QPRIKGVKGVF
Trigger: AAAGACTCCTTTGACGCCCTTGATGCGTGGCTGGCAGAAATGAAGCAAGAGCTTGGACCTCATGGAAACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380809.7
3UTR GCA 72 bp GATGTTTTTCAGGAGGGCTGTCCGAGCATTCACAACTaGTTTGAAGGCATCTTCACTGCCAGGTGCTACACA +
Preference number: 3 (lower is better)
Translates to: DVFQEGCPSIHN*FEGIFTARCYT
Trigger: TGTGTAGCACCTGGCAGTGAAGATGCCTTCAAAGCAGTTGTGAATGCTCGGACAGCCCTCCTGAAAAACATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380809.7
ENST00000534855.5
3UTR-3UTR CAA 90 bp CCCAGGGGCAATCAATGCAGGAAGCTAACCAACACTGTCCAGCTCTCCAGCAAATGTAAAAGCAGCAACTaGTCTGTAAGGTCACACCAA +
Preference number: 3 (lower is better)
Translates to: PRGNQCRKLTNTVQLSSKCKSSN*SVRSHQ
Trigger: TTGGTGTGACCTTACAGACAAGTTGCTGCTTTTACA...TTTGCTGGAGAGCTGGACAGTGTTGGTTAGCTTCCTGCATTGATTGCCCCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR CAA 90 bp ACATTCAGAGTTGTCGTGTCAATTCGGGCTGACGCTACCGTGCACGATCCCTCAAACTTCATCCATCCCTaGTATATCAAGGAGGAGACT +
Preference number: 3 (lower is better)
Translates to: TFRVVVSIRADATVHDPSNFIHP*YIKEET
Trigger: AGTCTCCTCCTTGATATACAAGGGATGGATGAAGTT...TGAGGGATCGTGCACGGTAGCGTCAGCCCGAATTGACACGACAACTCTGAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR TCA 72 bp TTTTCAGGAGGGCTGTCCGAGCATTCACAACTGCTTTaGAGGCATCTTCACTGCCAGGTGCTACACATTTGT +
Preference number: 3 (lower is better)
Translates to: FSGGLSEHSQLL*RHLHCQVLHIC
Trigger: ACAAATGTGTAGCACCTGGCAGTGAAGATGCCTTCAAAGCAGTTGTGAATGCTCGGACAGCCCTCCTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380809.7
ENST00000534855.5
3UTR GCA 72 bp TCAGAGTTGTCGTGTCAATTCGGGCTGACGCTACCGTaGACGATCCCTCATTCATATGACTTCTACATTCTG +
Preference number: 3 (lower is better)
Translates to: SELSCQFGLTLP*TIPHSYDFYIL
Trigger: CAGAATGTAGAAGTCATATGAATGAGGGATCGTGCACGGTAGCGTCAGCCCGAATTGACACGACAACTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR CAA 90 bp TGGGGTACAGTGGCAAAGGAGGTGACATTCCCATGCCTAGTGGAATTAGTTGTACCAAAGGATCCACACTaGCCTCTGATCAACCAGATT +
Preference number: 3 (lower is better)
Translates to: WGTVAKEVTFPCLVELVVPKDPH*PLINQI
Trigger: AATCTGGTTGATCAGAGGCAAGTGTGGATCCTTTGG...TACAACTAATTCCACTAGGCATGGGAATGTCACCTCCTTTGCCACTGTACCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR CAA 90 bp GTGCTCTCTACTGCTACCAGCAACCATTTCTATGGCAAGGGAAAGGCCTCAGATAAAGTCTGTTTGCATTaGAGTCCCACATGTGGCTTT +
Preference number: 3 (lower is better)
Translates to: VLSTATSNHFYGKGKASDKVCLH*SPTCGF
Trigger: AAAGCCACATGTGGGACTCAAATGCAAACAGACTTT...ATCTGAGGCCTTTCCCTTGCCATAGAAATGGTTGCTGGTAGCAGTAGAGAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR CAA 90 bp CCAACAGGGCCTCTATTGCACCGCCTAATATTGCACTGCTCGTTAGACACCATCACAGGGGTTCTGATGTaGTTTGCTTCCATTTTTGTT +
Preference number: 3 (lower is better)
Translates to: PTGPLLHRLILHCSLDTITGVLM*FASIFV
Trigger: AACAAAAATGGAAGCAAACAACATCAGAACCCCTGT...GATGGTGTCTAACGAGCAGTGCAATATTAGGCGGTGCAATAGAGGCCCTGTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR CAA 90 bp CCAACAGGGCCTCTATTGCACCGCCTAATATTGCACTGCTCGTTAGACACCATCTTACTCTTCAGAAATTaGGAGCCCAAGCAGGAATTA +
Preference number: 3 (lower is better)
Translates to: PTGPLLHRLILHCSLDTILLFRN*EPKQEL
Trigger: TAATTCCTGCTTGGGCTCCAAATTTCTGAAGAGTAA...GATGGTGTCTAACGAGCAGTGCAATATTAGGCGGTGCAATAGAGGCCCTGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR CAA 90 bp TCGTTAGACACCATCTCACTTATCCATGTCACCAGTGTAAGCTTTTGTCTTCTCCCGAAGAACTCTGGGTaGGAGTTCTGTAGCCTCAGA +
Preference number: 3 (lower is better)
Translates to: SLDTISLIHVTSVSFCLLPKNSG*EFCSLR
Trigger: TCTGAGGCTACAGAACTCCAACCCAGAGTTCTTCGG...GAGAAGACAAAAGCTTACACTGGTGACATGGATAAGTGAGATGGTGTCTAACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR CAA 90 bp CCCAGGGGCAATCAATGCAGGAAGCTAACCAACACTGTCCAGCTCTCCAGCAAATTAATAATGAAGGTGTaGGAAACTGAGTCTCAAGAC +
Preference number: 3 (lower is better)
Translates to: PRGNQCRKLTNTVQLSSKLIMKV*ETESQD
Trigger: GTCTTGAGACTCAGTTTCCAACACCTTCATTATTAA...TTTGCTGGAGAGCTGGACAGTGTTGGTTAGCTTCCTGCATTGATTGCCCCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR CAA 90 bp CCCAGGGGCAATCAATGCAGGAAGCTAACCAACACTGTCCAGCTCTCCAGCAAAAAAAAGTGTTACTTCTaGGTGACTCAGATGTTGAAG +
Preference number: 3 (lower is better)
Translates to: PRGNQCRKLTNTVQLSSKKKCYF*VTQMLK
Trigger: CTTCAACATCTGAGTCACCAAGAAGTAACACTTTTT...TTTGCTGGAGAGCTGGACAGTGTTGGTTAGCTTCCTGCATTGATTGCCCCTGGG
47% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR CAA 90 bp CCCAGGGGCAATCAATGCAGGAAGCTAACCAACACTGTCCAGCTCTCCAGCAAACACCAGTGTAAGCTTTaGTCTTCTCTAGAAAAGTTT +
Preference number: 3 (lower is better)
Translates to: PRGNQCRKLTNTVQLSSKHQCKL*SSLEKF
Trigger: AAACTTTTCTAGAGAAGACAAAAGCTTACACTGGTG...TTTGCTGGAGAGCTGGACAGTGTTGGTTAGCTTCCTGCATTGATTGCCCCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR CAA 90 bp ACATTTGTCAGGGTGAAGAAGCACAGCAAGTTTCCGATACGCTTTATTGACTTCATGAGGTCCAAGCTCTaGCTTCATTTCTGCCAGCCA +
Preference number: 3 (lower is better)
Translates to: TFVRVKKHSKFPIRFIDFMRSKL*LHFCQP
Trigger: TGGCTGGCAGAAATGAAGCAAGAGCTTGGACCTCAT...GAAGTCAATAAAGCGTATCGGAAACTTGCTGTGCTTCTTCACCCTGACAAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380809.7
3UTR-3UTR CAA 90 bp GGTTTGACTCCCAGCATGTCCCAACTGTCTTTACTATTTCGAATTCTGCGAATGAAGTACAGGAACCCTTaGCTTTCAGCCCAAAGACGT +
Preference number: 3 (lower is better)
Translates to: GLTPSMSQLSLLFRILRMKYRNP*LSAQRR
Trigger: ACGTCTTTGGGCTGAAAGCAAAGGGTTCCTGTACTT...CATTCGCAGAATTCGAAATAGTAAAGACAGTTGGGACATGCTGGGAGTCAAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380809.7
3UTR-3UTR CAA 90 bp TTGGAAACTGAGTCTCAAGACCTAAGAATCAAGCTCAGGCTAAATTTCACCAACCCAAGTACTTCTGTCTaGGGGCCTGATTCCTCATTC +
Preference number: 3 (lower is better)
Translates to: LETESQDLRIKLRLNFTNPSTSV*GPDSSF
Trigger: GAATGAGGAATCAGGCCCCAAGACAGAAGTACTTGG...GTTGGTGAAATTTAGCCTGAGCTTGATTCTTAGGTCTTGAGACTCAGTTTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR CAA 90 bp GAAATGCCTCCAGGGATTTCTAACAAGTTTAAAAAGTGTTACTTCTTGGTGACTGCCACACATTCAGAGTaGTCGTGTCAATTCGGGCTG +
Preference number: 3 (lower is better)
Translates to: EMPPGISNKFKKCYFLVTATHSE*SCQFGL
Trigger: CAGCCCGAATTGACACGACAACTCTGAATGTGTGGC...AGTCACCAAGAAGTAACACTTTTTAAACTTGTTAGAAATCCCTGGAGGCATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR-3UTR CAA 90 bp AATATTGCACTGCTCGTTAGACACCATCTCACTTATCCATGTCACCAGTGTAAGAAACTGATTCAGAGCTaGCAGTGGCTGCTTACTTAC +
Preference number: 3 (lower is better)
Translates to: NIALLVRHHLTYPCHQCKKLIQS*QWLLTY
Trigger: GTAAGTAAGCAGCCACTGCAAGCTCTGAATCAGTTT...CTTACACTGGTGACATGGATAAGTGAGATGGTGTCTAACGAGCAGTGCAATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR TCA 72 bp TCTATAAGCACCGTAAGGAGTGCCAGTCCTAATACATaGACTTCATCCATCCCTTGTATATCAAGGAGGAGA +
Preference number: 3 (lower is better)
Translates to: SISTVRSASPNT*TSSIPCISRRR
Trigger: TCTCCTCCTTGATATACAAGGGATGGATGAAGTTCATGTATTAGGACTGGCACTCCTTACGGTGCTTATAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR TCA 72 bp ACGATCCCTCATTCATATGACTTCTACATTCTGCTGTaGGGACAGACATGTCTGAGTGCTTTCAGCATGATA +
Preference number: 3 (lower is better)
Translates to: TIPHSYDFYILL*GQTCLSAFSMI
Trigger: TATCATGCTGAAAGCACTCAGACATGTCTGTCCTCACAGCAGAATGTAGAAGTCATATGAATGAGGGATCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR GCA 72 bp CAGTTTGTGCTGAAGTTTCAAAGTACAGGAACCCTTTaGTTTCAGCCCAAAGACGTCCTTCACTTTCATCTA +
Preference number: 3 (lower is better)
Translates to: QFVLKFQSTGTL*FQPKDVLHFHL
Trigger: TAGATGAAAGTGAAGGACGTCTTTGGGCTGAAAGCAAAGGGTTCCTGTACTTTGAAACTTCAGCACAAACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380809.7
3UTR-3UTR CAA 90 bp TTTCAGCCCAAAGACGTCCTTCACTTTCATCTACACAGCGATGTTTGGTACAATAAAGTCTGTTTGCATTaGAGTCCCACATGTGGCTTT +
Preference number: 3 (lower is better)
Translates to: FQPKDVLHFHLHSDVWYNKVCLH*SPTCGF
Trigger: AAAGCCACATGTGGGACTCAAATGCAAACAGACTTT...ATTGTACCAAACATCGCTGTGTAGATGAAAGTGAAGGACGTCTTTGGGCTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380809.7
3UTR-3UTR CAA 90 bp TTCTATCCAAGATGTATCTGGAACATCTCATTAATGCCTTCTCCAGTTTGTGCTAAGGAAAACTCCACGTaGGTTATTTCACCTCTAGGG +
Preference number: 3 (lower is better)
Translates to: FYPRCIWNISLMPSPVCAKENST*VISPLG
Trigger: CCCTAGAGGTGAAATAACCAACGTGGAGTTTTCCTT...AGCACAAACTGGAGAAGGCATTAATGAGATGTTCCAGATACATCTTGGATAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380809.7
3UTR-3UTR CAA 90 bp TGCTTAGGTAGGTTAGAAGATGAATTTGAAATGCCTCCAGGGATTTCTAACAAGAAAGTCTGTTTGCATTaGAGTCCCACATGTGGCTTT +
Preference number: 3 (lower is better)
Translates to: CLGRLEDEFEMPPGISNKKVCLH*SPTCGF
Trigger: AAAGCCACATGTGGGACTCAAATGCAAACAGACTTT...CTTGTTAGAAATCCCTGGAGGCATTTCAAATTCATCTTCTAACCTACCTAAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR GCA 72 bp ACTGTCTTTACTATTTCGAATTCTGCGAATGGCATCTaGTTGTTCTTTGGTGAAACTAGCACTGCTATTGGT +
Preference number: 3 (lower is better)
Translates to: TVFTISNSANGI*LFFGETSTAIG
Trigger: ACCAATAGCAGTGCTAGTTTCACCAAAGAACAAGCAGATGCCATTCGCAGAATTCGAAATAGTAAAGACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380809.7
3UTR TCA 72 bp CTCAGGCTAAATTTCACCAACTCACACATAAGGATATaGGTGGGAGCACTAATGAATTTTCTCTGCTGTAAT +
Preference number: 3 (lower is better)
Translates to: LRLNFTNSHIRI*VGALMNFLCCN
Trigger: ATTACAGCAGAGAAAATTCATTAGTGCTCCCACTCATATCCTTATGTGTGAGTTGGTGAAATTTAGCCTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR CCA 72 bp AAGTACGAACCTCTCTTCACTTTGCAAAGCTTGCAATaGAAAGTGGTTAGCTATATTTTGCAGCTAAGTTCA +
Preference number: 3 (lower is better)
Translates to: KYEPLFTLQSLQ*KVVSYILQLSS
Trigger: TGAACTTAGCTGCAAAATATAGCTAACCACTTTCCATTGCAAGCTTTGCAAAGTGAAGAGAGGTTCGTACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR CCA 72 bp AAAGACGTCCTTCACTTTCATCTACACAGCGATGTTTaGTACAATCAATCTTGTTGGCACAAACTACAAATA +
Preference number: 3 (lower is better)
Translates to: KDVLHFHLHSDV*YNQSCWHKLQI
Trigger: TATTTGTAGTTTGTGCCAACAAGATTGATTGTACCAAACATCGCTGTGTAGATGAAAGTGAAGGACGTCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380809.7
3UTR GCA 72 bp ATACCAATTATGAGAAGTACGAACCTCTCTTCACTTTaGAAAGCTTGCAATGGAAAGTGGTTAGCTATATTT +
Preference number: 3 (lower is better)
Translates to: IPIMRSTNLSSL*KACNGKWLAIF
Trigger: AAATATAGCTAACCACTTTCCATTGCAAGCTTTGCAAAGTGAAGAGAGGTTCGTACTTCTCATAATTGGTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CCA 90 bp ATTTCTATGGCAAGGGAAAGGCCTCAGATCCAGGGACAGGATAGGCAGCAGCCATGGCCTCCATGGCCCTaGCTCTCTCGGGGCCACCCG +
Preference number: 4 (lower is better)
Translates to: ISMARERPQIQGQDRQQPWPPWP*LSRGHP
Trigger: CGGGTGGCCCCGAGAGAGCCAGGGCCATGGAGGCCA...TGGCTGCTGCCTATCCTGTCCCTGGATCTGAGGCCTTTCCCTTGCCATAGAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CCA 90 bp GTAAGACGCGCACTGTCACTGTCAAAGGCAACAAGCACATGGCTTACAGCTCCATGGCCTCCATGGCCCTaGCTCTCTCGGGGCCACCCG +
Preference number: 4 (lower is better)
Translates to: VRRALSLSKATSTWLTAPWPPWP*LSRGHP
Trigger: CGGGTGGCCCCGAGAGAGCCAGGGCCATGGAGGCCA...TGGAGCTGTAAGCCATGTGCTTGTTGCCTTTGACAGTGACAGTGCGCGTCTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CCA 90 bp TGGGGCCTGATTCCTCATTCCCAGGTGCACAGTGCTCTCTACTGCTACCAGCAACTTCTTGTGCACCGCTaGCCCGTCCCTCAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: WGLIPHSQVHSALYCYQQLLVHR*PVPQAS
Trigger: GGAGGCCTGAGGGACGGGCCAGCGGTGCACAAGAAG...TTGCTGGTAGCAGTAGAGAGCACTGTGCACCTGGGAATGAGGAATCAGGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534855.5
CDS-3UTR CCA 90 bp GAGTTGTCGTGTCAATTCGGGCTGACGCTACCGTGCACGATCCCTCATTCATATGGCCTCCTCGTCCAATaGCGGAGCCGCTGCTCTCGT +
Preference number: 4 (lower is better)
Translates to: ELSCQFGLTLPCTIPHSYGLLVQ*RSRCSR
Trigger: ACGAGAGCAGCGGCTCCGCCATTGGACGAGGAGGCC...ATATGAATGAGGGATCGTGCACGGTAGCGTCAGCCCGAATTGACACGACAACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534855.5
CDS-3UTR GCA 90 bp CTGCTTTCACAGTTAAGGGGGAAGAACGCCCAGGGGCAATCAATGCAGGAAGCTGCTGAGGAGTGGCCCTaGCTTTCTCACCTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: LLSQLRGKNAQGQSMQEAAEEWP*LSHLPV
Trigger: CACAGGCAGGTGAGAAAGGCAGGGCCACTCCTCAGC...AGCTTCCTGCATTGATTGCCCCTGGGCGTTCTTCCCCCTTAACTGTGAAAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp ATTTTCCATGTTTCCATGAGGTCCAAGCTCTTGCTTCATTTCTGCCAGCCACGCCAATGGCGGAGCCGCTaGTCTCGTCACCGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: IFHVSMRSKLLLHFCQPRQWRSR*SRHRLA
Trigger: GGCGAGGCGGTGACGAGAGCAGCGGCTCCGCCATTG...GCGTGGCTGGCAGAAATGAAGCAAGAGCTTGGACCTCATGGAAACATGGAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380809.7
CDS-3UTR GCA 90 bp GAGTTGTCGTGTCAATTCGGGCTGACGCTACCGTGCACGATCCCTCATTCATATCTCGGTCTCTTCTTGTaGACCGCTGGCCCGTCCCTC +
Preference number: 4 (lower is better)
Translates to: ELSCQFGLTLPCTIPHSYLGLFL*TAGPSL
Trigger: GAGGGACGGGCCAGCGGTGCACAAGAAGAGACCGAG...ATATGAATGAGGGATCGTGCACGGTAGCGTCAGCCCGAATTGACACGACAACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534855.5
CDS-3UTR CCA 90 bp GTCAGGGTGAAGAAGCACAGCAAGTTTCCGATACGCTTTATTGACTTCATCCCTTGGCCTCCATGGCCCTaGCTCTCTCGGGGCCACCCG +
Preference number: 4 (lower is better)
Translates to: VRVKKHSKFPIRFIDFIPWPPWP*LSRGHP
Trigger: CGGGTGGCCCCGAGAGAGCCAGGGCCATGGAGGCCA...AGGGATGAAGTCAATAAAGCGTATCGGAAACTTGCTGTGCTTCTTCACCCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380809.7
CDS-3UTR CCA 90 bp GTAAGACGCGCACTGTCACTGTCAAAGGCAACAAGCACATGGCTTACAGCTCCATCCGCTTCGGCATGTTaGCCTCCATGGCCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: VRRALSLSKATSTWLTAPSASAC*PPWPWL
Trigger: GAGCCAGGGCCATGGAGGCCAACATGCCGAAGCGGA...TGGAGCTGTAAGCCATGTGCTTGTTGCCTTTGACAGTGACAGTGCGCGTCTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CCA 90 bp TGGGGCCTGATTCCTCATTCCCAGGTGCACAGTGCTCTCTACTGCTACCAGCAAAGCTTGCCCCAAGCTTaGCTGGCCTTTCCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: WGLIPHSQVHSALYCYQQSLPQA*LAFPLL
Trigger: CAGCAGAGGAAAGGCCAGCCAAGCTTGGGGCAAGCT...TTGCTGGTAGCAGTAGAGAGCACTGTGCACCTGGGAATGAGGAATCAGGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CCA 90 bp CAGGAACCCTTTGCTTTCAGCCCAAAGACGTCCTTCACTTTCATCTACACAGCGCTTCTTGTGCACCGCTaGCCCGTCCCTCAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: QEPFAFSPKTSFTFIYTALLVHR*PVPQAS
Trigger: GGAGGCCTGAGGGACGGGCCAGCGGTGCACAAGAAG...CGCTGTGTAGATGAAAGTGAAGGACGTCTTTGGGCTGAAAGCAAAGGGTTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380809.7
CDS-3UTR CCA 90 bp CACTGCTCGTTAGACACCATCTCACTTATCCATGTCACCAGTGTAAGCTTTTGTATCCCCGCCGCTGCCTaGCAGCAGGCGCGGGCGGTT +
Preference number: 4 (lower is better)
Translates to: HCSLDTISLIHVTSVSFCIPAAA*QQARAV
Trigger: AACCGCCCGCGCCTGCTGCCAGGCAGCGGCGGGGAT...ACAAAAGCTTACACTGGTGACATGGATAAGTGAGATGGTGTCTAACGAGCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534855.5
CDS-3UTR TCA 90 bp CTGTGGCAAAGGCTGGCAGTAAGACAAGGGCTAAGCCTCATAAGGAGTCTCTCCAGAGGCCAACTTTGCTaGGGAGTGGCCCTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: LWQRLAVRQGLSLIRSLSRGQLC*GVALPF
Trigger: GAAAGGCAGGGCCACTCCTCAGCAAAGTTGGCCTCT...GGAGAGACTCCTTATGAGGCTTAGCCCTTGTCTTACTGCCAGCCTTTGCCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp CCAACAGGGCCTCTATTGCACCGCCTAATATTGCACTGCTCGTTAGACACCATCGCTGAGGAGTGGCCCTaGCTTTCTCACCTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: PTGPLLHRLILHCSLDTIAEEWP*LSHLPV
Trigger: CACAGGCAGGTGAGAAAGGCAGGGCCACTCCTCAGC...GATGGTGTCTAACGAGCAGTGCAATATTAGGCGGTGCAATAGAGGCCCTGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp CAGGAACCCTTTGCTTTCAGCCCAAAGACGTCCTTCACTTTCATCTACACAGCGCTCGGTCTCTTCTTGTaGACCGCTGGCCCGTCCCTC +
Preference number: 4 (lower is better)
Translates to: QEPFAFSPKTSFTFIYTALGLFL*TAGPSL
Trigger: GAGGGACGGGCCAGCGGTGCACAAGAAGAGACCGAG...CGCTGTGTAGATGAAAGTGAAGGACGTCTTTGGGCTGAAAGCAAAGGGTTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380809.7
CDS-3UTR TCA 90 bp TCACAGTTAAGGGGGAAGAACGCCCAGGGGCAATCAATGCAGGAAGCTAACCAAAGAGGCCAACTTTGCTaGGGAGTGGCCCTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: SQLRGKNAQGQSMQEANQRGQLC*GVALPF
Trigger: GAAAGGCAGGGCCACTCCTCAGCAAAGTTGGCCTCT...TTGGTTAGCTTCCTGCATTGATTGCCCCTGGGCGTTCTTCCCCCTTAACTGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp TCTTGGGGCCTGATTCCTCATTCCCAGGTGCACAGTGCTCTCTACTGCTACCAGCTCTTGCTTCATTTCTaGCAGCCACGCATCAAGGGC +
Preference number: 4 (lower is better)
Translates to: SWGLIPHSQVHSALYCYQLLLHF*QPRIKG
Trigger: GCCCTTGATGCGTGGCTGGCAGAAATGAAGCAAGAG...CTGGTAGCAGTAGAGAGCACTGTGCACCTGGGAATGAGGAATCAGGCCCCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp ACATTCAGAGTTGTCGTGTCAATTCGGGCTGACGCTACCGTGCACGATCCCTCAGAGATCTCCCCTGACTaGCACCCAAAGGATCCACAC +
Preference number: 4 (lower is better)
Translates to: TFRVVVSIRADATVHDPSEISPD*HPKDPH
Trigger: GTGTGGATCCTTTGGGTGGCAGTCAGGGGAGATCTC...TGAGGGATCGTGCACGGTAGCGTCAGCCCGAATTGACACGACAACTCTGAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp CACTGCTCGTTAGACACCATCTCACTTATCCATGTCACCAGTGTAAGCTTTTGTCAATGGCGGAGCCGCTaGTCTCGTCACCGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: HCSLDTISLIHVTSVSFCQWRSR*SRHRLA
Trigger: GGCGAGGCGGTGACGAGAGCAGCGGCTCCGCCATTG...ACAAAAGCTTACACTGGTGACATGGATAAGTGAGATGGTGTCTAACGAGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534855.5
CDS-3UTR CCA 90 bp TCTTGGGGCCTGATTCCTCATTCCCAGGTGCACAGTGCTCTCTACTGCTACCAGTGTCTCTCCCACTGGTaGCTGCAGAAGAGGAACAGA +
Preference number: 4 (lower is better)
Translates to: SWGLIPHSQVHSALYCYQCLSHW*LQKRNR
Trigger: TCTGTTCCTCTTCTGCAGCCACCAGTGGGAGAGACA...CTGGTAGCAGTAGAGAGCACTGTGCACCTGGGAATGAGGAATCAGGCCCCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CCA 90 bp GTAAGACGCGCACTGTCACTGTCAAAGGCAACAAGCACATGGCTTACAGCTCCAAGCTTGCCCCAAGCTTaGCTGGCCTTTCCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: VRRALSLSKATSTWLTAPSLPQA*LAFPLL
Trigger: CAGCAGAGGAAAGGCCAGCCAAGCTTGGGGCAAGCT...TGGAGCTGTAAGCCATGTGCTTGTTGCCTTTGACAGTGACAGTGCGCGTCTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CCA 90 bp GTCTCAAGACCTAAGAATCAAGCTCAGGCTAAATTTCACCAACTCACACATAAGGGGCGGTTGGGAGCGTaGGGAGCCGGGGGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: VSRPKNQAQAKFHQLTHKGRLGA*GAGGGR
Trigger: TCTCCCTCCCCCGGCTCCCCACGCTCCCAACCGCCC...CTTATGTGTGAGTTGGTGAAATTTAGCCTGAGCTTGATTCTTAGGTCTTGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534855.5
CDS-3UTR TCA 90 bp ACATTCAGAGTTGTCGTGTCAATTCGGGCTGACGCTACCGTGCACGATCCCTCAAACGCTCTGGTTTCCTaGAGACAAGCTCAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: TFRVVVSIRADATVHDPSNALVS*RQAQCS
Trigger: GCTGCACTGAGCTTGTCTTCAGGAAACCAGAGCGTT...TGAGGGATCGTGCACGGTAGCGTCAGCCCGAATTGACACGACAACTCTGAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp GTCTCTCCTACTGCATCAAGCTTGCCCCAAGCTTGGCTGGCCTTTCCTCTGCTGATCTTCACTGCCAGGTaGTACACATTTGTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: VSPTASSLPQAWLAFPLLIFTAR*YTFVRV
Trigger: CACCCTGACAAATGTGTAGCACCTGGCAGTGAAGAT...CAGCAGAGGAAAGGCCAGCCAAGCTTGGGGCAAGCTTGATGCAGTAGGAGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp CCAACAGGGCCTCTATTGCACCGCCTAATATTGCACTGCTCGTTAGACACCATCCTACTGCATCAAGCTTaGCCCAAGCTTGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: PTGPLLHRLILHCSLDTILLHQA*PKLGWP
Trigger: AGGCCAGCCAAGCTTGGGGCAAGCTTGATGCAGTAG...GATGGTGTCTAACGAGCAGTGCAATATTAGGCGGTGCAATAGAGGCCCTGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CCA 90 bp GTCTCTCCTACTGCATCAAGCTTGCCCCAAGCTTGGCTGGCCTTTCCTCTGCTGCAGCAACCATTTCTATaGCAAGGGAAAGGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: VSPTASSLPQAWLAFPLLQQPFL*QGKGLR
Trigger: TCTGAGGCCTTTCCCTTGCCATAGAAATGGTTGCTG...CAGCAGAGGAAAGGCCAGCCAAGCTTGGGGCAAGCTTGATGCAGTAGGAGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR TCA 90 bp TCATTTCTGCCAGCCACGCATCAAGGGCGTCAAAGGAGTCTTTCTGCCCAACATATTGACTTCATCCCTTaGGGCCCCAGGTTTGACTCC +
Preference number: 4 (lower is better)
Translates to: SFLPATHQGRQRSLSAQHIDFIP*GPRFDS
Trigger: GGAGTCAAACCTGGGGCCTCAAGGGATGAAGTCAAT...ATGTTGGGCAGAAAGACTCCTTTGACGCCCTTGATGCGTGGCTGGCAGAAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380809.7
CDS-3UTR TCA 90 bp GGCGGATACTACTGCAGCTGGCTCCTCCAAGTACTTCTGTCTTGGGGCCTGATTAAGAAACAACACTGGTaGGGAAGTGTAGAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: GGYYCSWLLQVLLSWGLIKKQHW*GSVEEA
Trigger: GGCCTCTTCTACACTTCCTCACCAGTGTTGTTTCTT...AATCAGGCCCCAAGACAGAAGTACTTGGAGGAGCCAGCTGCAGTAGTATCCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR TCA 90 bp GTCTCTCCTACTGCATCAAGCTTGCCCCAAGCTTGGCTGGCCTTTCCTCTGCTGGCCAGTCCTAATACATaGACTTCATCCATCCCTTGT +
Preference number: 4 (lower is better)
Translates to: VSPTASSLPQAWLAFPLLASPNT*TSSIPC
Trigger: ACAAGGGATGGATGAAGTTCATGTATTAGGACTGGC...CAGCAGAGGAAAGGCCAGCCAAGCTTGGGGCAAGCTTGATGCAGTAGGAGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp TCTTGGGGCCTGATTCCTCATTCCCAGGTGCACAGTGCTCTCTACTGCTACCAGAGTACAGGAACCCTTTaGTTTCAGCCCAAAGACGTC +
Preference number: 4 (lower is better)
Translates to: SWGLIPHSQVHSALYCYQSTGTL*FQPKDV
Trigger: GACGTCTTTGGGCTGAAAGCAAAGGGTTCCTGTACT...CTGGTAGCAGTAGAGAGCACTGTGCACCTGGGAATGAGGAATCAGGCCCCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp TCTTGGGGCCTGATTCCTCATTCCCAGGTGCACAGTGCTCTCTACTGCTACCAGAGAGCTTGCAGTGGCTaGTTACTTACTCTGGCTATC +
Preference number: 4 (lower is better)
Translates to: SWGLIPHSQVHSALYCYQRACSG*LLTLAI
Trigger: GATAGCCAGAGTAAGTAAGCAGCCACTGCAAGCTCT...CTGGTAGCAGTAGAGAGCACTGTGCACCTGGGAATGAGGAATCAGGCCCCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CCA 90 bp GTCTTTCTGCCCAACATCATAGACCAGTATCACACCCTGTGTGTCCTTGTAAAATCCGCTTCGGCATGTTaGCCTCCATGGCCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: VFLPNIIDQYHTLCVLVKSASAC*PPWPWL
Trigger: GAGCCAGGGCCATGGAGGCCAACATGCCGAAGCGGA...TTTTACAAGGACACACAGGGTGTGATACTGGTCTATGATGTTGGGCAGAAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380809.7
CDS-3UTR TCA 90 bp CTAGCACTGCTATTGGTGGTAGGGCGTTTCCCGCCATTTTCACATAAATCAACTTTGAGGCCCCAGGTTTaGCTCCCAGCATGTCCCAAC +
Preference number: 4 (lower is better)
Translates to: LALLLVVGRFPPFSHKSTLRPQV*LPACPN
Trigger: GTTGGGACATGCTGGGAGTCAAACCTGGGGCCTCAA...AGTTGATTTATGTGAAAATGGCGGGAAACGCCCTACCACCAATAGCAGTGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380809.7
CDS-3UTR TCA 90 bp ATGAGGTCCAAGCTCTTGCTTCATTTCTGCCAGCCACGCATCAAGGGCGTCAAATCCGATACGCTTTATTaGCTTCATCCCTTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: MRSKLLLHFCQPRIKGVKSDTLY*LHPLRP
Trigger: GGGCCTCAAGGGATGAAGTCAATAAAGCGTATCGGA...TTTGACGCCCTTGATGCGTGGCTGGCAGAAATGAAGCAAGAGCTTGGACCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380809.7
CDS-3UTR TCA 90 bp GTCTCTCCTACTGCATCAAGCTTGCCCCAAGCTTGGCTGGCCTTTCCTCTGCTGTCTGTACTTTCTACTTaGTGTTTTTCAGGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: VSPTASSLPQAWLAFPLLSVLST*CFSGGL
Trigger: CAGCCCTCCTGAAAAACATCAAGTAGAAAGTACAGA...CAGCAGAGGAAAGGCCAGCCAAGCTTGGGGCAAGCTTGATGCAGTAGGAGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR TCA 90 bp CCCAGGGGCAATCAATGCAGGAAGCTAACCAACACTGTCCAGCTCTCCAGCAAAAAGAAACAACACTGGTaGGGAAGTGTAGAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: PRGNQCRKLTNTVQLSSKKKQHW*GSVEEA
Trigger: GGCCTCTTCTACACTTCCTCACCAGTGTTGTTTCTT...TTTGCTGGAGAGCTGGACAGTGTTGGTTAGCTTCCTGCATTGATTGCCCCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR TCA 90 bp TGGGGCCTGATTCCTCATTCCCAGGTGCACAGTGCTCTCTACTGCTACCAGCAATTCTACATTCTGCTGTaGGGACAGACATGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: WGLIPHSQVHSALYCYQQFYILL*GQTCLS
Trigger: ACTCAGACATGTCTGTCCTCACAGCAGAATGTAGAA...TTGCTGGTAGCAGTAGAGAGCACTGTGCACCTGGGAATGAGGAATCAGGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR TCA 90 bp CTGCTTTCACAGTTAAGGGGGAAGAACGCCCAGGGGCAATCAATGCAGGAAGCTCCTCCCTTCCCCTTGTaGTGTTGTCATTGTTCAATG +
Preference number: 4 (lower is better)
Translates to: LLSQLRGKNAQGQSMQEAPPFPL*CCHCSM
Trigger: CATTGAACAATGACAACATCACAAGGGGAAGGGAGG...AGCTTCCTGCATTGATTGCCCCTGGGCGTTCTTCCCCCTTAACTGTGAAAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp ACTTCTGTCTTGGGGCCTGATTCCTCATTCCCAGGTGCACAGTGCTCTCTACTGGAAAATCCACAAGGCTaGAGTGGGCTTGGATTGGAA +
Preference number: 4 (lower is better)
Translates to: TSVLGPDSSFPGAQCSLLENPQG*SGLGLE
Trigger: TTCCAATCCAAGCCCACTGCAGCCTTGTGGATTTTC...CAGTAGAGAGCACTGTGCACCTGGGAATGAGGAATCAGGCCCCAAGACAGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CCA 90 bp ACTTCTGTCTTGGGGCCTGATTCCTCATTCCCAGGTGCACAGTGCTCTCTACTGATTCAGAGCTTGCAGTaGCTGCTTACTTACTCTGGC +
Preference number: 4 (lower is better)
Translates to: TSVLGPDSSFPGAQCSLLIQSLQ*LLTYSG
Trigger: GCCAGAGTAAGTAAGCAGCCACTGCAAGCTCTGAAT...CAGTAGAGAGCACTGTGCACCTGGGAATGAGGAATCAGGCCCCAAGACAGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CCA 90 bp TTAATGCCTTCTCCAGTTTGTGCTGAAGTTTCAAAGTACAGGAACCCTTTGCTTGGCCTCCTCGTCCAATaGCGGAGCCGCTGCTCTCGT +
Preference number: 4 (lower is better)
Translates to: LMPSPVCAEVSKYRNPLLGLLVQ*RSRCSR
Trigger: ACGAGAGCAGCGGCTCCGCCATTGGACGAGGAGGCC...AAGCAAAGGGTTCCTGTACTTTGAAACTTCAGCACAAACTGGAGAAGGCATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380809.7
CDS-3UTR TCA 90 bp ACTTCTGTCTTGGGGCCTGATTCCTCATTCCCAGGTGCACAGTGCTCTCTACTGATGAAGTACAGGGTGTaGCGCTCAGTTCACTTCATA +
Preference number: 4 (lower is better)
Translates to: TSVLGPDSSFPGAQCSLLMKYRV*RSVHFI
Trigger: TATGAAGTGAACTGAGCGTCACACCCTGTACTTCAT...CAGTAGAGAGCACTGTGCACCTGGGAATGAGGAATCAGGCCCCAAGACAGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR TCA 90 bp CCCAGGGGCAATCAATGCAGGAAGCTAACCAACACTGTCCAGCTCTCCAGCAAATTCTACATTCTGCTGTaGGGACAGACATGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: PRGNQCRKLTNTVQLSSKFYILL*GQTCLS
Trigger: ACTCAGACATGTCTGTCCTCACAGCAGAATGTAGAA...TTTGCTGGAGAGCTGGACAGTGTTGGTTAGCTTCCTGCATTGATTGCCCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR TCA 90 bp AATATTGCACTGCTCGTTAGACACCATCTCACTTATCCATGTCACCAGTGTAAGCGTGTCAATTCGGGCTaGCGCTACCGTGCACGATCC +
Preference number: 4 (lower is better)
Translates to: NIALLVRHHLTYPCHQCKRVNSG*RYRARS
Trigger: GGATCGTGCACGGTAGCGTCAGCCCGAATTGACACG...CTTACACTGGTGACATGGATAAGTGAGATGGTGTCTAACGAGCAGTGCAATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR TCA 90 bp TTTACAAAACCTTTGATTCAGAGTAAGCTTGATGGGGTACAGTGGCAAAGGAGGCGTGTCAATTCGGGCTaGCGCTACCGTGCACGATCC +
Preference number: 4 (lower is better)
Translates to: FTKPLIQSKLDGVQWQRRRVNSG*RYRARS
Trigger: GGATCGTGCACGGTAGCGTCAGCCCGAATTGACACG...CCTCCTTTGCCACTGTACCCCATCAAGCTTACTCTGAATCAAAGGTTTTGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR TCA 90 bp TGGGGCCTGATTCCTCATTCCCAGGTGCACAGTGCTCTCTACTGCTACCAGCAATGCAATACGGCTGAATaGGGTTCCCAATCTAGTATT +
Preference number: 4 (lower is better)
Translates to: WGLIPHSQVHSALYCYQQCNTAE*GSQSSI
Trigger: AATACTAGATTGGGAACCTCATTCAGCCGTATTGCA...TTGCTGGTAGCAGTAGAGAGCACTGTGCACCTGGGAATGAGGAATCAGGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR TCA 90 bp CTGTGGCAAAGGCTGGCAGTAAGACAAGGGCTAAGCCTCATAAGGAGTCTCTCCTCCGATACGCTTTATTaGCTTCATCCCTGGAACATC +
Preference number: 4 (lower is better)
Translates to: LWQRLAVRQGLSLIRSLSSDTLY*LHPWNI
Trigger: GATGTTCCAGGGATGAAGTCAATAAAGCGTATCGGA...GGAGAGACTCCTTATGAGGCTTAGCCCTTGTCTTACTGCCAGCCTTTGCCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534855.5
CDS-3UTR CCA 90 bp TGGGGCCTGATTCCTCATTCCCAGGTGCACAGTGCTCTCTACTGCTACCAGCAATTCGAATTCTGCGAATaGCATCTGCTTGTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: WGLIPHSQVHSALYCYQQFEFCE*HLLVLW
Trigger: CCAAAGAACAAGCAGATGCCATTCGCAGAATTCGAA...TTGCTGGTAGCAGTAGAGAGCACTGTGCACCTGGGAATGAGGAATCAGGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264711.7
CDS-3UTR CCA 90 bp CTGTGGCAAAGGCTGGCAGTAAGACAAGGGCTAAGCCTCATAAGGAGTCTCTCCAGAGCAGTGAGATTCTaGGAAGGAAAACTCCACGTT +
Preference number: 4 (lower is better)
Translates to: LWQRLAVRQGLSLIRSLSRAVRF*EGKLHV
Trigger: AACGTGGAGTTTTCCTTCCCAGAATCTCACTGCTCT...GGAGAGACTCCTTATGAGGCTTAGCCCTTGTCTTACTGCCAGCCTTTGCCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CCA 90 bp ATTTCTATGGCAAGGGAAAGGCCTCAGATCCAGGGACAGGATAGGCAGCAGCCACACCTTTCTAACTTTTaGCAAAATCCCTCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: ISMARERPQIQGQDRQQPHLSNF*QNPSLP
Trigger: GGGAAGGGAGGGATTTTGCCAAAAGTTAGAAAGGTG...TGGCTGCTGCCTATCCTGTCCCTGGATCTGAGGCCTTTCCCTTGCCATAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CCA 90 bp CCAACAGGGCCTCTATTGCACCGCCTAATATTGCACTGCTCGTTAGACACCATCAAGGCAACAAGCACATaGCTTACAGCTCCACCTTTC +
Preference number: 4 (lower is better)
Translates to: PTGPLLHRLILHCSLDTIKATST*LTAPPF
Trigger: GAAAGGTGGAGCTGTAAGCCATGTGCTTGTTGCCTT...GATGGTGTCTAACGAGCAGTGCAATATTAGGCGGTGCAATAGAGGCCCTGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR CAA 72 bp TCTCCAGCAAAACTCATCTTGCCAACAGGGCCTCTATaGCACCGCCTAATATTGCACTGCTCGTTAGACACC +
Preference number: 4 (lower is better)
Translates to: SPAKLILPTGPL*HRLILHCSLDT
Trigger: GGTGTCTAACGAGCAGTGCAATATTAGGCGGTGCAATAGAGGCCCTGTTGGCAAGATGAGTTTTGCTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR TCA 90 bp TGGATTGGAAGAAAGTGGCTTTTCTTCTTAGGAGGTAAGGTAGATGCTCTTTGGTTGAGGCCCCAGGTTTaGCTCCCAGCATGTCCCAAC +
Preference number: 4 (lower is better)
Translates to: WIGRKWLFFLGGKVDALWLRPQV*LPACPN
Trigger: GTTGGGACATGCTGGGAGTCAAACCTGGGGCCTCAA...CCAAAGAGCATCTACCTTACCTCCTAAGAAGAAAAGCCACTTTCTTCCAATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264711.7
CDS-3UTR TCA 90 bp GTAAGACGCGCACTGTCACTGTCAAAGGCAACAAGCACATGGCTTACAGCTCCAGCCAGTCCTAATACATaGACTTCATCCATCCCTTGT +
Preference number: 4 (lower is better)
Translates to: VRRALSLSKATSTWLTAPASPNT*TSSIPC
Trigger: ACAAGGGATGGATGAAGTTCATGTATTAGGACTGGC...TGGAGCTGTAAGCCATGTGCTTGTTGCCTTTGACAGTGACAGTGCGCGTCTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR TCA 90 bp GTCTCTCCTACTGCATCAAGCTTGCCCCAAGCTTGGCTGGCCTTTCCTCTGCTGTTCCTTTTACGTAAATaGAGTGGTATATGGCCATTC +
Preference number: 4 (lower is better)
Translates to: VSPTASSLPQAWLAFPLLFLLRK*SGIWPF
Trigger: GAATGGCCATATACCACTTCATTTACGTAAAAGGAA...CAGCAGAGGAAAGGCCAGCCAAGCTTGGGGCAAGCTTGATGCAGTAGGAGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp AACCCTTTGCTTTCAGCCCAAAGACGTCCTTCACTTTCATCTACACAGCGATGTCTCTTGCTTCATTTCTaGCAGCCACGCATCAAGGGC +
Preference number: 4 (lower is better)
Translates to: NPLLSAQRRPSLSSTQRCLLLHF*QPRIKG
Trigger: GCCCTTGATGCGTGGCTGGCAGAAATGAAGCAAGAG...ACATCGCTGTGTAGATGAAAGTGAAGGACGTCTTTGGGCTGAAAGCAAAGGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380809.7
CDS-3UTR GCA 90 bp TCACAGTTAAGGGGGAAGAACGCCCAGGGGCAATCAATGCAGGAAGCTAACCAACCGAGCATTCACAACTaGTTTGAAGGCATCTTCACT +
Preference number: 4 (lower is better)
Translates to: SQLRGKNAQGQSMQEANQPSIHN*FEGIFT
Trigger: AGTGAAGATGCCTTCAAAGCAGTTGTGAATGCTCGG...TTGGTTAGCTTCCTGCATTGATTGCCCCTGGGCGTTCTTCCCCCTTAACTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp GTAAGACGCGCACTGTCACTGTCAAAGGCAACAAGCACATGGCTTACAGCTCCACCGAGCATTCACAACTaGTTTGAAGGCATCTTCACT +
Preference number: 4 (lower is better)
Translates to: VRRALSLSKATSTWLTAPPSIHN*FEGIFT
Trigger: AGTGAAGATGCCTTCAAAGCAGTTGTGAATGCTCGG...TGGAGCTGTAAGCCATGTGCTTGTTGCCTTTGACAGTGACAGTGCGCGTCTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp ACTGTCAAAGGCAACAAGCACATGGCTTACAGCTCCACCTTTCTAACTTTTGGCAGGAGTCTCTCCTACTaGATCAAGCTTGCCCCAAGC +
Preference number: 4 (lower is better)
Translates to: TVKGNKHMAYSSTFLTFGRSLSY*IKLAPS
Trigger: GCTTGGGGCAAGCTTGATGCAGTAGGAGAGACTCCT...GCCAAAAGTTAGAAAGGTGGAGCTGTAAGCCATGTGCTTGTTGCCTTTGACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp GGAAGAAAGTGGCTTTTCTTCTTAGGAGGTAAGGTAGATGCTCTTTGGCAATCGGAGATCTCCCCTGACTaGCACCCAAAGGATCCACAC +
Preference number: 4 (lower is better)
Translates to: GRKWLFFLGGKVDALWQSEISPD*HPKDPH
Trigger: GTGTGGATCCTTTGGGTGGCAGTCAGGGGAGATCTC...CGATTGCCAAAGAGCATCTACCTTACCTCCTAAGAAGAAAAGCCACTTTCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp ATTTCTATGGCAAGGGAAAGGCCTCAGATCCAGGGACAGGATAGGCAGCAGCCAGAGGTGACATTCCCATaGCTAGTGGAATTAGTTGTA +
Preference number: 4 (lower is better)
Translates to: ISMARERPQIQGQDRQQPEVTFP*LVELVV
Trigger: TACAACTAATTCCACTAGGCATGGGAATGTCACCTC...TGGCTGCTGCCTATCCTGTCCCTGGATCTGAGGCCTTTCCCTTGCCATAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CCA 90 bp TGGGGCCTGATTCCTCATTCCCAGGTGCACAGTGCTCTCTACTGCTACCAGCAACTACACAGCGATGTTTaGTACAATCAATCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: WGLIPHSQVHSALYCYQQLHSDV*YNQSCW
Trigger: CCAACAAGATTGATTGTACCAAACATCGCTGTGTAG...TTGCTGGTAGCAGTAGAGAGCACTGTGCACCTGGGAATGAGGAATCAGGCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CCA 90 bp CACTGCTCGTTAGACACCATCTCACTTATCCATGTCACCAGTGTAAGCTTTTGTACTATGTTGCCCAGGTaGGACTTGAGCTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: HCSLDTISLIHVTSVSFCTMLPR*DLSSWA
Trigger: AGCCCAGGAGCTCAAGTCCCACCTGGGCAACATAGT...ACAAAAGCTTACACTGGTGACATGGATAAGTGAGATGGTGTCTAACGAGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CCA 90 bp GGCGGATACTACTGCAGCTGGCTCCTCCAAGTACTTCTGTCTTGGGGCCTGATTTACTCTTCAGAAATTTaGAGCCCAAGCAGGAATTAC +
Preference number: 4 (lower is better)
Translates to: GGYYCSWLLQVLLSWGLIYSSEI*SPSRNY
Trigger: GTAATTCCTGCTTGGGCTCCAAATTTCTGAAGAGTA...AATCAGGCCCCAAGACAGAAGTACTTGGAGGAGCCAGCTGCAGTAGTATCCGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CCA 90 bp ACTTCTGTCTTGGGGCCTGATTCCTCATTCCCAGGTGCACAGTGCTCTCTACTGAAGGTAGATGCTCTTTaGCAATCGATATGGGATAGC +
Preference number: 4 (lower is better)
Translates to: TSVLGPDSSFPGAQCSLLKVDAL*QSIWDS
Trigger: GCTATCCCATATCGATTGCCAAAGAGCATCTACCTT...CAGTAGAGAGCACTGTGCACCTGGGAATGAGGAATCAGGCCCCAAGACAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR CAA 72 bp TTTTTCAGGAGGGCTGTCCGAGCATTCACAACTGCTTaGAAGGCATCTTCACTGCCAGGTGCTACACATTTG +
Preference number: 4 (lower is better)
Translates to: FFRRAVRAFTTA*KASSLPGATHL
Trigger: CAAATGTGTAGCACCTGGCAGTGAAGATGCCTTCAAAGCAGTTGTGAATGCTCGGACAGCCCTCCTGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380809.7
ENST00000534855.5
CDS-3UTR TCA 90 bp GCTCAATTCAGAACTGTATCACCTCATTTTACAAACTCCCAAAGGGCTGCCAAGATTGACTTCATCCCTTaGGGCCCCAGGTTTGACTCC +
Preference number: 4 (lower is better)
Translates to: AQFRTVSPHFTNSQRAAKIDFIP*GPRFDS
Trigger: GGAGTCAAACCTGGGGCCTCAAGGGATGAAGTCAAT...CTTGGCAGCCCTTTGGGAGTTTGTAAAATGAGGTGATACAGTTCTGAATTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264711.7
CDS-3UTR TCA 90 bp CTGCTTTCACAGTTAAGGGGGAAGAACGCCCAGGGGCAATCAATGCAGGAAGCTTCACACATAAGGATATaGGTGGGAGCACTAATGAAT +
Preference number: 4 (lower is better)
Translates to: LLSQLRGKNAQGQSMQEASHIRI*VGALMN
Trigger: ATTCATTAGTGCTCCCACTCATATCCTTATGTGTGA...AGCTTCCTGCATTGATTGCCCCTGGGCGTTCTTCCCCCTTAACTGTGAAAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR TCA 90 bp GTAAGACGCGCACTGTCACTGTCAAAGGCAACAAGCACATGGCTTACAGCTCCAGAAGGTGTTGGAAACTaGGTCTCAAGACCTAAGAAT +
Preference number: 4 (lower is better)
Translates to: VRRALSLSKATSTWLTAPEGVGN*VSRPKN
Trigger: ATTCTTAGGTCTTGAGACTCAGTTTCCAACACCTTC...TGGAGCTGTAAGCCATGTGCTTGTTGCCTTTGACAGTGACAGTGCGCGTCTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp GGAAGAAAGTGGCTTTTCTTCTTAGGAGGTAAGGTAGATGCTCTTTGGCAATCGTTCCCAGGTGCACAGTaGTCTCTACTGCTACCAGCA +
Preference number: 4 (lower is better)
Translates to: GRKWLFFLGGKVDALWQSFPGAQ*SLLLPA
Trigger: TGCTGGTAGCAGTAGAGAGCACTGTGCACCTGGGAA...CGATTGCCAAAGAGCATCTACCTTACCTCCTAAGAAGAAAAGCCACTTTCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp GCTCAATTCAGAACTGTATCACCTCATTTTACAAACTCCCAAAGGGCTGCCAAGTTCCCAGGTGCACAGTaGTCTCTACTGCTACCAGCA +
Preference number: 4 (lower is better)
Translates to: AQFRTVSPHFTNSQRAAKFPGAQ*SLLLPA
Trigger: TGCTGGTAGCAGTAGAGAGCACTGTGCACCTGGGAA...CTTGGCAGCCCTTTGGGAGTTTGTAAAATGAGGTGATACAGTTCTGAATTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp CACATGAATGAAAAGAGCAGTGAGATTCTGGGAAGGAAAACTCCACGTTGGTTACTACTGCATCAAGCTTaGCCCAAGCTTGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: HMNEKSSEILGRKTPRWLLLHQA*PKLGWP
Trigger: AGGCCAGCCAAGCTTGGGGCAAGCTTGATGCAGTAG...TAACCAACGTGGAGTTTTCCTTCCCAGAATCTCACTGCTCTTTTCATTCATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp TGGGGTACAGTGGCAAAGGAGGTGACATTCCCATGCCTAGTGGAATTAGTTGTAGAAAATCCACAAGGCTaGAGTGGGCTTGGATTGGAA +
Preference number: 4 (lower is better)
Translates to: WGTVAKEVTFPCLVELVVENPQG*SGLGLE
Trigger: TTCCAATCCAAGCCCACTGCAGCCTTGTGGATTTTC...TACAACTAATTCCACTAGGCATGGGAATGTCACCTCCTTTGCCACTGTACCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp CACTGCTCGTTAGACACCATCTCACTTATCCATGTCACCAGTGTAAGCTTTTGTGGGCTGACGCTACCGTaGACGATCCCTCATTCATAT +
Preference number: 4 (lower is better)
Translates to: HCSLDTISLIHVTSVSFCGLTLP*TIPHSY
Trigger: ATATGAATGAGGGATCGTGCACGGTAGCGTCAGCCC...ACAAAAGCTTACACTGGTGACATGGATAAGTGAGATGGTGTCTAACGAGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp TGGGGTACAGTGGCAAAGGAGGTGACATTCCCATGCCTAGTGGAATTAGTTGTACAGCAAAACTCATCTTaGCAACAGGGCCTCTATTGC +
Preference number: 4 (lower is better)
Translates to: WGTVAKEVTFPCLVELVVQQNSS*QQGLYC
Trigger: GCAATAGAGGCCCTGTTGGCAAGATGAGTTTTGCTG...TACAACTAATTCCACTAGGCATGGGAATGTCACCTCCTTTGCCACTGTACCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CCA 90 bp CACTGCTCGTTAGACACCATCTCACTTATCCATGTCACCAGTGTAAGCTTTTGTTGTCTCTCCCACTGGTaGCTGCAGAAGAGGAACAGA +
Preference number: 4 (lower is better)
Translates to: HCSLDTISLIHVTSVSFCCLSHW*LQKRNR
Trigger: TCTGTTCCTCTTCTGCAGCCACCAGTGGGAGAGACA...ACAAAAGCTTACACTGGTGACATGGATAAGTGAGATGGTGTCTAACGAGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CCA 90 bp CTGCTTTCACAGTTAAGGGGGAAGAACGCCCAGGGGCAATCAATGCAGGAAGCTTCAAGGAGGAGACTGTaGTCAGAGAATGTATTTTGT +
Preference number: 4 (lower is better)
Translates to: LLSQLRGKNAQGQSMQEASRRRL*SENVFC
Trigger: ACAAAATACATTCTCTGACCACAGTCTCCTCCTTGA...AGCTTCCTGCATTGATTGCCCCTGGGCGTTCTTCCCCCTTAACTGTGAAAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR TCA 90 bp ATTTTCCATGTTTCCATGAGGTCCAAGCTCTTGCTTCATTTCTGCCAGCCACGCTTTTCCATGTTTCCATaGGGTCCAAGCTCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: IFHVSMRSKLLLHFCQPRFSMFP*GPSSCF
Trigger: GAAGCAAGAGCTTGGACCTCATGGAAACATGGAAAA...GCGTGGCTGGCAGAAATGAAGCAAGAGCTTGGACCTCATGGAAACATGGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380809.7
CDS-3UTR TCA 90 bp GAAGTACAGGGTGTGACGCTCAGTTCACTTCATACAAATGCAGGTCATTTCTCATCCGATACGCTTTATTaGCTTCATCCCTTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: EVQGVTLSSLHTNAGHFSSDTLY*LHPLRP
Trigger: GGGCCTCAAGGGATGAAGTCAATAAAGCGTATCGGA...TGAGAAATGACCTGCATTTGTATGAAGTGAACTGAGCGTCACACCCTGTACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000380809.7
CDS-3UTR TCA 90 bp GAAGTACAGGGTGTGACGCTCAGTTCACTTCATACAAATGCAGGTCATTTCTCAATCCACACTTGCCTCTaGTCAACCAGATTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: EVQGVTLSSLHTNAGHFSIHTCL*STRFRP
Trigger: TGGCCTGAATCTGGTTGATCAGAGGCAAGTGTGGAT...TGAGAAATGACCTGCATTTGTATGAAGTGAACTGAGCGTCACACCCTGTACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR TCA 90 bp CCCAGGGGCAATCAATGCAGGAAGCTAACCAACACTGTCCAGCTCTCCAGCAAATTCCTTTTACGTAAATaGAGTGGTATATGGCCATTC +
Preference number: 4 (lower is better)
Translates to: PRGNQCRKLTNTVQLSSKFLLRK*SGIWPF
Trigger: GAATGGCCATATACCACTTCATTTACGTAAAAGGAA...TTTGCTGGAGAGCTGGACAGTGTTGGTTAGCTTCCTGCATTGATTGCCCCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp CAGGAACCCTTTGCTTTCAGCCCAAAGACGTCCTTCACTTTCATCTACACAGCGTCTGCGAATGGCATCTaGTTGTTCTTTGGTGAAACT +
Preference number: 4 (lower is better)
Translates to: QEPFAFSPKTSFTFIYTASANGI*LFFGET
Trigger: AGTTTCACCAAAGAACAAGCAGATGCCATTCGCAGA...CGCTGTGTAGATGAAAGTGAAGGACGTCTTTGGGCTGAAAGCAAAGGGTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380809.7
CDS-3UTR GCA 90 bp TGGGGCCTGATTCCTCATTCCCAGGTGCACAGTGCTCTCTACTGCTACCAGCAAATGTCTGTGAAATTCTaGATGAAGTTAGTGCCAAAA +
Preference number: 4 (lower is better)
Translates to: WGLIPHSQVHSALYCYQQMSVKF*MKLVPK
Trigger: TTTTGGCACTAACTTCATGCAGAATTTCACAGACAT...TTGCTGGTAGCAGTAGAGAGCACTGTGCACCTGGGAATGAGGAATCAGGCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp TACAGTGGCAAAGGAGGTGACATTCCCATGCCTAGTGGAATTAGTTGTAAGACGCAGCAAAACTCATCTTaGCAACAGGGCCTCTATTGC +
Preference number: 4 (lower is better)
Translates to: YSGKGGDIPMPSGISCKTQQNSS*QQGLYC
Trigger: GCAATAGAGGCCCTGTTGGCAAGATGAGTTTTGCTG...CGTCTTACAACTAATTCCACTAGGCATGGGAATGTCACCTCCTTTGCCACTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CCA 90 bp GGAAGAAAGTGGCTTTTCTTCTTAGGAGGTAAGGTAGATGCTCTTTGGCAATCGTTTCTCACCTGCCTGTaGCAAAGGCTGGCAGTAAGA +
Preference number: 4 (lower is better)
Translates to: GRKWLFFLGGKVDALWQSFLTCL*QRLAVR
Trigger: TCTTACTGCCAGCCTTTGCCACAGGCAGGTGAGAAA...CGATTGCCAAAGAGCATCTACCTTACCTCCTAAGAAGAAAAGCCACTTTCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CCA 90 bp GCTCAATTCAGAACTGTATCACCTCATTTTACAAACTCCCAAAGGGCTGCCAAGTTTCTCACCTGCCTGTaGCAAAGGCTGGCAGTAAGA +
Preference number: 4 (lower is better)
Translates to: AQFRTVSPHFTNSQRAAKFLTCL*QRLAVR
Trigger: TCTTACTGCCAGCCTTTGCCACAGGCAGGTGAGAAA...CTTGGCAGCCCTTTGGGAGTTTGTAAAATGAGGTGATACAGTTCTGAATTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CCA 90 bp TCACAGTTAAGGGGGAAGAACGCCCAGGGGCAATCAATGCAGGAAGCTAACCAATCAAGGAGGAGACTGTaGTCAGAGAATGTATTTTGT +
Preference number: 4 (lower is better)
Translates to: SQLRGKNAQGQSMQEANQSRRRL*SENVFC
Trigger: ACAAAATACATTCTCTGACCACAGTCTCCTCCTTGA...TTGGTTAGCTTCCTGCATTGATTGCCCCTGGGCGTTCTTCCCCCTTAACTGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CCA 90 bp GAAGTACAGGGTGTGACGCTCAGTTCACTTCATACAAATGCAGGTCATTTCTCAAGGCTGCAGTGGGCTTaGATTGGAAGAAAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: EVQGVTLSSLHTNAGHFSRLQWA*IGRKWL
Trigger: AAGCCACTTTCTTCCAATCCAAGCCCACTGCAGCCT...TGAGAAATGACCTGCATTTGTATGAAGTGAACTGAGCGTCACACCCTGTACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CCA 90 bp TCTTGGGGCCTGATTCCTCATTCCCAGGTGCACAGTGCTCTCTACTGCTACCAGTTGCAAAGCTTGCAATaGAAAGTGGTTAGCTATATT +
Preference number: 4 (lower is better)
Translates to: SWGLIPHSQVHSALYCYQLQSLQ*KVVSYI
Trigger: AATATAGCTAACCACTTTCCATTGCAAGCTTTGCAA...CTGGTAGCAGTAGAGAGCACTGTGCACCTGGGAATGAGGAATCAGGCCCCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR CAA 72 bp ATCTTGCCAACAGGGCCTCTATTGCACCGCCTAATATaGCACTGCTCGTTAGACACCATCTCACTTATCCAT +
Preference number: 4 (lower is better)
Translates to: ILPTGPLLHRLI*HCSLDTISLIH
Trigger: ATGGATAAGTGAGATGGTGTCTAACGAGCAGTGCAATATTAGGCGGTGCAATAGAGGCCCTGTTGGCAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR TCA 90 bp TCGTTAGACACCATCTCACTTATCCATGTCACCAGTGTAAGCTTTTGTCTTCTCATCCACACTTGCCTCTaGTCAACCAGATTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: SLDTISLIHVTSVSFCLLIHTCL*STRFRP
Trigger: TGGCCTGAATCTGGTTGATCAGAGGCAAGTGTGGAT...GAGAAGACAAAAGCTTACACTGGTGACATGGATAAGTGAGATGGTGTCTAACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR TCA 90 bp CCAACAGGGCCTCTATTGCACCGCCTAATATTGCACTGCTCGTTAGACACCATCGCTAAATACCAATTATaGGAAGTACGAACCTCTCTT +
Preference number: 4 (lower is better)
Translates to: PTGPLLHRLILHCSLDTIAKYQL*EVRTSL
Trigger: AAGAGAGGTTCGTACTTCTCATAATTGGTATTTAGC...GATGGTGTCTAACGAGCAGTGCAATATTAGGCGGTGCAATAGAGGCCCTGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp CACTGCTCGTTAGACACCATCTCACTTATCCATGTCACCAGTGTAAGCTTTTGTAGTACAGGAACCCTTTaGTTTCAGCCCAAAGACGTC +
Preference number: 4 (lower is better)
Translates to: HCSLDTISLIHVTSVSFCSTGTL*FQPKDV
Trigger: GACGTCTTTGGGCTGAAAGCAAAGGGTTCCTGTACT...ACAAAAGCTTACACTGGTGACATGGATAAGTGAGATGGTGTCTAACGAGCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp TGGGGTACAGTGGCAAAGGAGGTGACATTCCCATGCCTAGTGGAATTAGTTGTAACAGACATGTCTGAGTaGTTTCAGCATGATAAAGGC +
Preference number: 4 (lower is better)
Translates to: WGTVAKEVTFPCLVELVVTDMSE*FQHDKG
Trigger: GCCTTTATCATGCTGAAAGCACTCAGACATGTCTGT...TACAACTAATTCCACTAGGCATGGGAATGTCACCTCCTTTGCCACTGTACCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CCA 90 bp ACTGTCAAAGGCAACAAGCACATGGCTTACAGCTCCACCTTTCTAACTTTTGGCCACCTTTCTAACTTTTaGCAAAATCCCTCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: TVKGNKHMAYSSTFLTFGHLSNF*QNPSLP
Trigger: GGGAAGGGAGGGATTTTGCCAAAAGTTAGAAAGGTG...GCCAAAAGTTAGAAAGGTGGAGCTGTAAGCCATGTGCTTGTTGCCTTTGACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR CAA 72 bp TATAATATTTTCCATGTTTCCATGAGGTCCAAGCTCTaGCTTCATTTCTGCCAGCCACGCATCAAGGGCGTC +
Preference number: 4 (lower is better)
Translates to: YNIFHVSMRSKL*LHFCQPRIKGV
Trigger: GACGCCCTTGATGCGTGGCTGGCAGAAATGAAGCAAGAGCTTGGACCTCATGGAAACATGGAAAATATTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380809.7
3UTR CAA 72 bp GCATCTGCTTGTTCTTTGGTGAAACTAGCACTGCTATaGGTGGTAGGGCGTTTCCCGCCATTTTCACATAAA +
Preference number: 4 (lower is better)
Translates to: ASACSLVKLALL*VVGRFPPFSHK
Trigger: TTTATGTGAAAATGGCGGGAAACGCCCTACCACCAATAGCAGTGCTAGTTTCACCAAAGAACAAGCAGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380809.7
CDS-3UTR TCA 90 bp TGGATTGGAAGAAAGTGGCTTTTCTTCTTAGGAGGTAAGGTAGATGCTCTTTGGCATTCACAACTGCTTTaGAGGCATCTTCACTGCCAG +
Preference number: 4 (lower is better)
Translates to: WIGRKWLFFLGGKVDALWHSQLL*RHLHCQ
Trigger: CTGGCAGTGAAGATGCCTTCAAAGCAGTTGTGAATG...CCAAAGAGCATCTACCTTACCTCCTAAGAAGAAAAGCCACTTTCTTCCAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR TCA 90 bp CTAAATACCAATTATGAGAAGTACGAACCTCTCTTCACTTTGCAAAGCTTGCAATTCTGTCTTGGGGCCTaGTTCCTCATTCCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: LNTNYEKYEPLFTLQSLQFCLGA*FLIPRC
Trigger: GCACCTGGGAATGAGGAATCAGGCCCCAAGACAGAA...TTGCAAGCTTTGCAAAGTGAAGAGAGGTTCGTACTTCTCATAATTGGTATTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR TCA 90 bp TCGTTAGACACCATCTCACTTATCCATGTCACCAGTGTAAGCTTTTGTCTTCTCTGGGTAGCAACACAATaGCCCCCAAGTCTGGATTTT +
Preference number: 4 (lower is better)
Translates to: SLDTISLIHVTSVSFCLLWVATQ*PPSLDF
Trigger: AAAATCCAGACTTGGGGGTCATTGTGTTGCTACCCA...GAGAAGACAAAAGCTTACACTGGTGACATGGATAAGTGAGATGGTGTCTAACGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR TCA 90 bp TGGATTGGAAGAAAGTGGCTTTTCTTCTTAGGAGGTAAGGTAGATGCTCTTTGGCCTCCCTTCCCCTTGTaGTGTTGTCATTGTTCAATG +
Preference number: 4 (lower is better)
Translates to: WIGRKWLFFLGGKVDALWPPFPL*CCHCSM
Trigger: CATTGAACAATGACAACATCACAAGGGGAAGGGAGG...CCAAAGAGCATCTACCTTACCTCCTAAGAAGAAAAGCCACTTTCTTCCAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp CCACGCATCAAGGGCGTCAAAGGAGTCTTTCTGCCCAACATCATAGACCAGTATGTCAATTCCAATTGTTaGCAGGTATTTAGACACGAA +
Preference number: 4 (lower is better)
Translates to: PRIKGVKGVFLPNIIDQYVNSNC*QVFRHE
Trigger: TTCGTGTCTAAATACCTGGCAACAATTGGAATTGAC...ATACTGGTCTATGATGTTGGGCAGAAAGACTCCTTTGACGCCCTTGATGCGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380809.7
CDS-3UTR GCA 90 bp CACTGCTCGTTAGACACCATCTCACTTATCCATGTCACCAGTGTAAGCTTTTGTCACAGTGCTCTCTACTaGTACCAGCAACCATTTCTA +
Preference number: 4 (lower is better)
Translates to: HCSLDTISLIHVTSVSFCHSALY*YQQPFL
Trigger: TAGAAATGGTTGCTGGTAGCAGTAGAGAGCACTGTG...ACAAAAGCTTACACTGGTGACATGGATAAGTGAGATGGTGTCTAACGAGCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp CTGCCAAGAGTCATCATTATAGATCGATGGGTTAAAATACCACCTAAGGAACTCTTCCTCATTCCCAGGTaGACAGTGCTCTCTACTGCT +
Preference number: 4 (lower is better)
Translates to: LPRVIIIDRWVKIPPKELFLIPR*TVLSTA
Trigger: AGCAGTAGAGAGCACTGTGCACCTGGGAATGAGGAA...GAGTTCCTTAGGTGGTATTTTAACCCATCGATCTATAATGATGACTCTTGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp TGGGGTACAGTGGCAAAGGAGGTGACATTCCCATGCCTAGTGGAATTAGTTGTATACCAAGATGAAAAGTaGGATGATAAAGCAACGCTC +
Preference number: 4 (lower is better)
Translates to: WGTVAKEVTFPCLVELVVYQDEK*DDKATL
Trigger: GAGCGTTGCTTTATCATCGCACTTTTCATCTTGGTA...TACAACTAATTCCACTAGGCATGGGAATGTCACCTCCTTTGCCACTGTACCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp GTAAGACGCGCACTGTCACTGTCAAAGGCAACAAGCACATGGCTTACAGCTCCACTAATGAATTTTCTCTaGTGTAATTGCTCATCTGTG +
Preference number: 4 (lower is better)
Translates to: VRRALSLSKATSTWLTAPLMNFL*CNCSSV
Trigger: CACAGATGAGCAATTACAGCAGAGAAAATTCATTAG...TGGAGCTGTAAGCCATGTGCTTGTTGCCTTTGACAGTGACAGTGCGCGTCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp CACATGAATGAAAAGAGCAGTGAGATTCTGGGAAGGAAAACTCCACGTTGGTTAAGAGCTTGCAGTGGCTaGTTACTTACTCTGGCTATC +
Preference number: 4 (lower is better)
Translates to: HMNEKSSEILGRKTPRWLRACSG*LLTLAI
Trigger: GATAGCCAGAGTAAGTAAGCAGCCACTGCAAGCTCT...TAACCAACGTGGAGTTTTCCTTCCCAGAATCTCACTGCTCTTTTCATTCATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp TACAGTGGCAAAGGAGGTGACATTCCCATGCCTAGTGGAATTAGTTGTAAGACGGAGGTGACATTCCCATaGCTAGTGGAATTAGTTGTA +
Preference number: 4 (lower is better)
Translates to: YSGKGGDIPMPSGISCKTEVTFP*LVELVV
Trigger: TACAACTAATTCCACTAGGCATGGGAATGTCACCTC...CGTCTTACAACTAATTCCACTAGGCATGGGAATGTCACCTCCTTTGCCACTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CCA 90 bp TTCAAAGTACAGGAACCCTTTGCTTTCAGCCCAAAGACGTCCTTCACTTTCATCAGAGCAGTGAGATTCTaGGAAGGAAAACTCCACGTT +
Preference number: 4 (lower is better)
Translates to: FKVQEPFAFSPKTSFTFIRAVRF*EGKLHV
Trigger: AACGTGGAGTTTTCCTTCCCAGAATCTCACTGCTCT...GATGAAAGTGAAGGACGTCTTTGGGCTGAAAGCAAAGGGTTCCTGTACTTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380809.7
CDS-3UTR CCA 90 bp TACACATTTGTCAGGGTGAAGAAGCACAGCAAGTTTCCGATACGCTTTATTGACCAGCAACCATTTCTATaGCAAGGGAAAGGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: YTFVRVKKHSKFPIRFIDQQPFL*QGKGLR
Trigger: TCTGAGGCCTTTCCCTTGCCATAGAAATGGTTGCTG...GTCAATAAAGCGTATCGGAAACTTGCTGTGCTTCTTCACCCTGACAAATGTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534855.5
CDS-3UTR CCA 90 bp CTAAATACCAATTATGAGAAGTACGAACCTCTCTTCACTTTGCAAAGCTTGCAAACTATGTTGCCCAGGTaGGACTTGAGCTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LNTNYEKYEPLFTLQSLQTMLPR*DLSSWA
Trigger: AGCCCAGGAGCTCAAGTCCCACCTGGGCAACATAGT...TTGCAAGCTTTGCAAAGTGAAGAGAGGTTCGTACTTCTCATAATTGGTATTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CCA 90 bp GGAAGAAAGTGGCTTTTCTTCTTAGGAGGTAAGGTAGATGCTCTTTGGCAATCGGATAAAGCAACGCTCTaGTTTCCTGAAGACAAGCTC +
Preference number: 4 (lower is better)
Translates to: GRKWLFFLGGKVDALWQSDKATL*FPEDKL
Trigger: GAGCTTGTCTTCAGGAAACCAGAGCGTTGCTTTATC...CGATTGCCAAAGAGCATCTACCTTACCTCCTAAGAAGAAAAGCCACTTTCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CCA 90 bp TTTACAAAACCTTTGATTCAGAGTAAGCTTGATGGGGTACAGTGGCAAAGGAGGCGAAGAACTCTGGGTTaGAGTTCTGTAGCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: FTKPLIQSKLDGVQWQRRRRTLG*SSVASE
Trigger: TTCTGAGGCTACAGAACTCCAACCCAGAGTTCTTCG...CCTCCTTTGCCACTGTACCCCATCAAGCTTACTCTGAATCAAAGGTTTTGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CCA 90 bp TGGTGGCTGCAGAAGAGGAACAGAGTGAATATCATAAAGGAATGCTCAATTCAGATTCAGAGCTTGCAGTaGCTGCTTACTTACTCTGGC +
Preference number: 4 (lower is better)
Translates to: WWLQKRNRVNIIKECSIQIQSLQ*LLTYSG
Trigger: GCCAGAGTAAGTAAGCAGCCACTGCAAGCTCTGAAT...CTGAATTGAGCATTCCTTTATGATATTCACTCTGTTCCTCTTCTGCAGCCACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR CAA 72 bp CCAGTTTGTGCTGAAGTTTCAAAGTACAGGAACCCTTaGCTTTCAGCCCAAAGACGTCCTTCACTTTCATCT +
Preference number: 4 (lower is better)
Translates to: PVCAEVSKYRNP*LSAQRRPSLSS
Trigger: AGATGAAAGTGAAGGACGTCTTTGGGCTGAAAGCAAAGGGTTCCTGTACTTTGAAACTTCAGCACAAACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380809.7
CDS-3UTR TCA 90 bp TTCAAAGTACAGGAACCCTTTGCTTTCAGCCCAAAGACGTCCTTCACTTTCATCTCTGTACTTTCTACTTaGTGTTTTTCAGGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: FKVQEPFAFSPKTSFTFISVLST*CFSGGL
Trigger: CAGCCCTCCTGAAAAACATCAAGTAGAAAGTACAGA...GATGAAAGTGAAGGACGTCTTTGGGCTGAAAGCAAAGGGTTCCTGTACTTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380809.7
CDS-3UTR TCA 90 bp CACTGCTCGTTAGACACCATCTCACTTATCCATGTCACCAGTGTAAGCTTTTGTAAGTCTGTTTGCATTTaGGTCCCACATGTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: HCSLDTISLIHVTSVSFCKSVCI*VPHVAF
Trigger: AAAAGCCACATGTGGGACTCAAATGCAAACAGACTT...ACAAAAGCTTACACTGGTGACATGGATAAGTGAGATGGTGTCTAACGAGCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR TCA 90 bp TCAGCCCAAAGACGTCCTTCACTTTCATCTACACAGCGATGTTTGGTACAATCAAAGTCTGTTTGCATTTaGGTCCCACATGTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: SAQRRPSLSSTQRCLVQSKSVCI*VPHVAF
Trigger: AAAAGCCACATGTGGGACTCAAATGCAAACAGACTT...TGATTGTACCAAACATCGCTGTGTAGATGAAAGTGAAGGACGTCTTTGGGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380809.7
CDS-3UTR TCA 90 bp GGTATATGGCCATTCTTAACATTAATAATGAAGGTGTTGGAAACTGAGTCTCAATTCTGTCTTGGGGCCTaGTTCCTCATTCCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: GIWPFLTLIMKVLETESQFCLGA*FLIPRC
Trigger: GCACCTGGGAATGAGGAATCAGGCCCCAAGACAGAA...TTGAGACTCAGTTTCCAACACCTTCATTATTAATGTTAAGAATGGCCATATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR TCA 90 bp GAAATGCCTCCAGGGATTTCTAACAAGTTTAAAAAGTGTTACTTCTTGGTGACTAACGCTCTGGTTTCCTaGAGACAAGCTCAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: EMPPGISNKFKKCYFLVTNALVS*RQAQCS
Trigger: GCTGCACTGAGCTTGTCTTCAGGAAACCAGAGCGTT...AGTCACCAAGAAGTAACACTTTTTAAACTTGTTAGAAATCCCTGGAGGCATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR TCA 90 bp TACAGTGGCAAAGGAGGTGACATTCCCATGCCTAGTGGAATTAGTTGTAAGACGTCACACATAAGGATATaGGTGGGAGCACTAATGAAT +
Preference number: 4 (lower is better)
Translates to: YSGKGGDIPMPSGISCKTSHIRI*VGALMN
Trigger: ATTCATTAGTGCTCCCACTCATATCCTTATGTGTGA...CGTCTTACAACTAATTCCACTAGGCATGGGAATGTCACCTCCTTTGCCACTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp GTCTCAAGACCTAAGAATCAAGCTCAGGCTAAATTTCACCAACTCACACATAAGATCTTCACTGCCAGGTaGTACACATTTGTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: VSRPKNQAQAKFHQLTHKIFTAR*YTFVRV
Trigger: CACCCTGACAAATGTGTAGCACCTGGCAGTGAAGAT...CTTATGTGTGAGTTGGTGAAATTTAGCCTGAGCTTGATTCTTAGGTCTTGAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp ACTATTTCGAATTCTGCGAATGGCATCTGCTTGTTCTTTGGTGAAACTAGCACTATCTTCACTGCCAGGTaGTACACATTTGTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: TISNSANGICLFFGETSTIFTAR*YTFVRV
Trigger: CACCCTGACAAATGTGTAGCACCTGGCAGTGAAGAT...AGTGCTAGTTTCACCAAAGAACAAGCAGATGCCATTCGCAGAATTCGAAATAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380809.7
CDS-3UTR GCA 90 bp GGAAGAAAGTGGCTTTTCTTCTTAGGAGGTAAGGTAGATGCTCTTTGGCAATCGACAGACATGTCTGAGTaGTTTCAGCATGATAAAGGC +
Preference number: 4 (lower is better)
Translates to: GRKWLFFLGGKVDALWQSTDMSE*FQHDKG
Trigger: GCCTTTATCATGCTGAAAGCACTCAGACATGTCTGT...CGATTGCCAAAGAGCATCTACCTTACCTCCTAAGAAGAAAAGCCACTTTCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp GAAATGCCTCCAGGGATTTCTAACAAGTTTAAAAAGTGTTACTTCTTGGTGACTGGGCTGACGCTACCGTaGACGATCCCTCATTCATAT +
Preference number: 4 (lower is better)
Translates to: EMPPGISNKFKKCYFLVTGLTLP*TIPHSY
Trigger: ATATGAATGAGGGATCGTGCACGGTAGCGTCAGCCC...AGTCACCAAGAAGTAACACTTTTTAAACTTGTTAGAAATCCCTGGAGGCATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CCA 90 bp GTCAGGGTGAAGAAGCACAGCAAGTTTCCGATACGCTTTATTGACTTCATCCCTCTACACAGCGATGTTTaGTACAATCAATCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: VRVKKHSKFPIRFIDFIPLHSDV*YNQSCW
Trigger: CCAACAAGATTGATTGTACCAAACATCGCTGTGTAG...AGGGATGAAGTCAATAAAGCGTATCGGAAACTTGCTGTGCTTCTTCACCCTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380809.7
CDS-3UTR CCA 90 bp TCAGCCCAAAGACGTCCTTCACTTTCATCTACACAGCGATGTTTGGTACAATCATTCGAATTCTGCGAATaGCATCTGCTTGTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: SAQRRPSLSSTQRCLVQSFEFCE*HLLVLW
Trigger: CCAAAGAACAAGCAGATGCCATTCGCAGAATTCGAA...TGATTGTACCAAACATCGCTGTGTAGATGAAAGTGAAGGACGTCTTTGGGCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380809.7
CDS-3UTR CCA 90 bp AATATTGCACTGCTCGTTAGACACCATCTCACTTATCCATGTCACCAGTGTAAGAGAGCAGTGAGATTCTaGGAAGGAAAACTCCACGTT +
Preference number: 4 (lower is better)
Translates to: NIALLVRHHLTYPCHQCKRAVRF*EGKLHV
Trigger: AACGTGGAGTTTTCCTTCCCAGAATCTCACTGCTCT...CTTACACTGGTGACATGGATAAGTGAGATGGTGTCTAACGAGCAGTGCAATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CCA 90 bp CTGCCAAGAGTCATCATTATAGATCGATGGGTTAAAATACCACCTAAGGAACTCCCTCCAGGAACCTTGTaGATTTCCCCAAGTGAAATG +
Preference number: 4 (lower is better)
Translates to: LPRVIIIDRWVKIPPKELPPGTL*ISPSEM
Trigger: CATTTCACTTGGGGAAATCCACAAGGTTCCTGGAGG...GAGTTCCTTAGGTGGTATTTTAACCCATCGATCTATAATGATGACTCTTGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CCA 90 bp CTGCCAAGAGTCATCATTATAGATCGATGGGTTAAAATACCACCTAAGGAACTCCGAAGAACTCTGGGTTaGAGTTCTGTAGCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: LPRVIIIDRWVKIPPKELRRTLG*SSVASE
Trigger: TTCTGAGGCTACAGAACTCCAACCCAGAGTTCTTCG...GAGTTCCTTAGGTGGTATTTTAACCCATCGATCTATAATGATGACTCTTGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR TCA 90 bp TTGGAAACTGAGTCTCAAGACCTAAGAATCAAGCTCAGGCTAAATTTCACCAACTTTTCCATGTTTCCATaGGGTCCAAGCTCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: LETESQDLRIKLRLNFTNFSMFP*GPSSCF
Trigger: GAAGCAAGAGCTTGGACCTCATGGAAACATGGAAAA...GTTGGTGAAATTTAGCCTGAGCTTGATTCTTAGGTCTTGAGACTCAGTTTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR TCA 90 bp TTCTATCCAAGATGTATCTGGAACATCTCATTAATGCCTTCTCCAGTTTGTGCTCATTCACAACTGCTTTaGAGGCATCTTCACTGCCAG +
Preference number: 4 (lower is better)
Translates to: FYPRCIWNISLMPSPVCAHSQLL*RHLHCQ
Trigger: CTGGCAGTGAAGATGCCTTCAAAGCAGTTGTGAATG...AGCACAAACTGGAGAAGGCATTAATGAGATGTTCCAGATACATCTTGGATAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380809.7
CDS-3UTR TCA 90 bp TTTACAAAACCTTTGATTCAGAGTAAGCTTGATGGGGTACAGTGGCAAAGGAGGTCTGTACTTTCTACTTaGTGTTTTTCAGGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: FTKPLIQSKLDGVQWQRRSVLST*CFSGGL
Trigger: CAGCCCTCCTGAAAAACATCAAGTAGAAAGTACAGA...CCTCCTTTGCCACTGTACCCCATCAAGCTTACTCTGAATCAAAGGTTTTGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR TCA 90 bp TGGATTGGAAGAAAGTGGCTTTTCTTCTTAGGAGGTAAGGTAGATGCTCTTTGGGAAGGTGTTGGAAACTaGGTCTCAAGACCTAAGAAT +
Preference number: 4 (lower is better)
Translates to: WIGRKWLFFLGGKVDALWEGVGN*VSRPKN
Trigger: ATTCTTAGGTCTTGAGACTCAGTTTCCAACACCTTC...CCAAAGAGCATCTACCTTACCTCCTAAGAAGAAAAGCCACTTTCTTCCAATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp TTCTATCCAAGATGTATCTGGAACATCTCATTAATGCCTTCTCCAGTTTGTGCTAGTACAGGAACCCTTTaGTTTCAGCCCAAAGACGTC +
Preference number: 4 (lower is better)
Translates to: FYPRCIWNISLMPSPVCASTGTL*FQPKDV
Trigger: GACGTCTTTGGGCTGAAAGCAAAGGGTTCCTGTACT...AGCACAAACTGGAGAAGGCATTAATGAGATGTTCCAGATACATCTTGGATAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380809.7
CDS-3UTR GCA 90 bp TGGTGGCTGCAGAAGAGGAACAGAGTGAATATCATAAAGGAATGCTCAATTCAGTCTGCGAATGGCATCTaGTTGTTCTTTGGTGAAACT +
Preference number: 4 (lower is better)
Translates to: WWLQKRNRVNIIKECSIQSANGI*LFFGET
Trigger: AGTTTCACCAAAGAACAAGCAGATGCCATTCGCAGA...CTGAATTGAGCATTCCTTTATGATATTCACTCTGTTCCTCTTCTGCAGCCACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264711.7
CDS-3UTR GCA 90 bp ACTATTTCGAATTCTGCGAATGGCATCTGCTTGTTCTTTGGTGAAACTAGCACTCCGAGCATTCACAACTaGTTTGAAGGCATCTTCACT +
Preference number: 4 (lower is better)
Translates to: TISNSANGICLFFGETSTPSIHN*FEGIFT
Trigger: AGTGAAGATGCCTTCAAAGCAGTTGTGAATGCTCGG...AGTGCTAGTTTCACCAAAGAACAAGCAGATGCCATTCGCAGAATTCGAAATAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380809.7
CDS-3UTR GCA 90 bp CTTGTATATCAAGGAGGAGACTGTGGTCAGAGAATGTATTTTGTAAGCTATAGTTTCCTCATTCCCAGGTaGACAGTGCTCTCTACTGCT +
Preference number: 4 (lower is better)
Translates to: LVYQGGDCGQRMYFVSYSFLIPR*TVLSTA
Trigger: AGCAGTAGAGAGCACTGTGCACCTGGGAATGAGGAA...ACTATAGCTTACAAAATACATTCTCTGACCACAGTCTCCTCCTTGATATACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp GGTATATGGCCATTCTTAACATTAATAATGAAGGTGTTGGAAACTGAGTCTCAAAGGAGTCTCTCCTACTaGATCAAGCTTGCCCCAAGC +
Preference number: 4 (lower is better)
Translates to: GIWPFLTLIMKVLETESQRSLSY*IKLAPS
Trigger: GCTTGGGGCAAGCTTGATGCAGTAGGAGAGACTCCT...TTGAGACTCAGTTTCCAACACCTTCATTATTAATGTTAAGAATGGCCATATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp GGAAGAAAGTGGCTTTTCTTCTTAGGAGGTAAGGTAGATGCTCTTTGGCAATCGTACCAAGATGAAAAGTaGGATGATAAAGCAACGCTC +
Preference number: 4 (lower is better)
Translates to: GRKWLFFLGGKVDALWQSYQDEK*DDKATL
Trigger: GAGCGTTGCTTTATCATCGCACTTTTCATCTTGGTA...CGATTGCCAAAGAGCATCTACCTTACCTCCTAAGAAGAAAAGCCACTTTCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp GGAAGAAAGTGGCTTTTCTTCTTAGGAGGTAAGGTAGATGCTCTTTGGCAATCGAACCTCTCTTCACTTTaGAAAGCTTGCAATGGAAAG +
Preference number: 4 (lower is better)
Translates to: GRKWLFFLGGKVDALWQSNLSSL*KACNGK
Trigger: CTTTCCATTGCAAGCTTTGCAAAGTGAAGAGAGGTT...CGATTGCCAAAGAGCATCTACCTTACCTCCTAAGAAGAAAAGCCACTTTCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CCA 90 bp TGGTGGCTGCAGAAGAGGAACAGAGTGAATATCATAAAGGAATGCTCAATTCAGAAGGTAGATGCTCTTTaGCAATCGATATGGGATAGC +
Preference number: 4 (lower is better)
Translates to: WWLQKRNRVNIIKECSIQKVDAL*QSIWDS
Trigger: GCTATCCCATATCGATTGCCAAAGAGCATCTACCTT...CTGAATTGAGCATTCCTTTATGATATTCACTCTGTTCCTCTTCTGCAGCCACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CCA 90 bp CTTGTATATCAAGGAGGAGACTGTGGTCAGAGAATGTATTTTGTAAGCTATAGTAGGCTGCAGTGGGCTTaGATTGGAAGAAAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: LVYQGGDCGQRMYFVSYSRLQWA*IGRKWL
Trigger: AAGCCACTTTCTTCCAATCCAAGCCCACTGCAGCCT...ACTATAGCTTACAAAATACATTCTCTGACCACAGTCTCCTCCTTGATATACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CCA 90 bp ACTGTCAAAGGCAACAAGCACATGGCTTACAGCTCCACCTTTCTAACTTTTGGCAATGACCCCCAAGTCTaGATTTTTAAATTAACAGGC +
Preference number: 4 (lower is better)
Translates to: TVKGNKHMAYSSTFLTFGNDPQV*IFKLTG
Trigger: GCCTGTTAATTTAAAAATCCAGACTTGGGGGTCATT...GCCAAAAGTTAGAAAGGTGGAGCTGTAAGCCATGTGCTTGTTGCCTTTGACAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CCA 90 bp TGCTTAGGTAGGTTAGAAGATGAATTTGAAATGCCTCCAGGGATTTCTAACAAGAAGGCAACAAGCACATaGCTTACAGCTCCACCTTTC +
Preference number: 4 (lower is better)
Translates to: CLGRLEDEFEMPPGISNKKATST*LTAPPF
Trigger: GAAAGGTGGAGCTGTAAGCCATGTGCTTGTTGCCTT...CTTGTTAGAAATCCCTGGAGGCATTTCAAATTCATCTTCTAACCTACCTAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR CAA 72 bp GTCTTTACTATTTCGAATTCTGCGAATGGCATCTGCTaGTTCTTTGGTGAAACTAGCACTGCTATTGGTGGT +
Preference number: 4 (lower is better)
Translates to: VFTISNSANGIC*FFGETSTAIGG
Trigger: ACCACCAATAGCAGTGCTAGTTTCACCAAAGAACAAGCAGATGCCATTCGCAGAATTCGAAATAGTAAAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380809.7
CDS-3UTR TCA 90 bp CTAAATACCAATTATGAGAAGTACGAACCTCTCTTCACTTTGCAAAGCTTGCAACATTCACAACTGCTTTaGAGGCATCTTCACTGCCAG +
Preference number: 4 (lower is better)
Translates to: LNTNYEKYEPLFTLQSLQHSQLL*RHLHCQ
Trigger: CTGGCAGTGAAGATGCCTTCAAAGCAGTTGTGAATG...TTGCAAGCTTTGCAAAGTGAAGAGAGGTTCGTACTTCTCATAATTGGTATTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR TCA 90 bp CACATGAATGAAAAGAGCAGTGAGATTCTGGGAAGGAAAACTCCACGTTGGTTAAACTTACAGGGGTTCTaGTGTTGTTTGCTTCCATTT +
Preference number: 4 (lower is better)
Translates to: HMNEKSSEILGRKTPRWLNLQGF*CCLLPF
Trigger: AAATGGAAGCAAACAACATCAGAACCCCTGTAAGTT...TAACCAACGTGGAGTTTTCCTTCCCAGAATCTCACTGCTCTTTTCATTCATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR TCA 90 bp CTTGTATATCAAGGAGGAGACTGTGGTCAGAGAATGTATTTTGTAAGCTATAGTTGGGTAGCAACACAATaGCCCCCAAGTCTGGATTTT +
Preference number: 4 (lower is better)
Translates to: LVYQGGDCGQRMYFVSYSWVATQ*PPSLDF
Trigger: AAAATCCAGACTTGGGGGTCATTGTGTTGCTACCCA...ACTATAGCTTACAAAATACATTCTCTGACCACAGTCTCCTCCTTGATATACAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR TCA 90 bp TTTCAGCCCAAAGACGTCCTTCACTTTCATCTACACAGCGATGTTTGGTACAATTTCGAACTAGTTTTGTaGTCTTGGGCAAGTCACTTA +
Preference number: 4 (lower is better)
Translates to: FQPKDVLHFHLHSDVWYNFELVL*SWASHL
Trigger: TAAGTGACTTGCCCAAGATCACAAAACTAGTTCGAA...ATTGTACCAAACATCGCTGTGTAGATGAAAGTGAAGGACGTCTTTGGGCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380809.7
CDS-3UTR GCA 90 bp CACATGAATGAAAAGAGCAGTGAGATTCTGGGAAGGAAAACTCCACGTTGGTTAAACCTCTCTTCACTTTaGAAAGCTTGCAATGGAAAG +
Preference number: 4 (lower is better)
Translates to: HMNEKSSEILGRKTPRWLNLSSL*KACNGK
Trigger: CTTTCCATTGCAAGCTTTGCAAAGTGAAGAGAGGTT...TAACCAACGTGGAGTTTTCCTTCCCAGAATCTCACTGCTCTTTTCATTCATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR TCA 90 bp CTTGTATATCAAGGAGGAGACTGTGGTCAGAGAATGTATTTTGTAAGCTATAGTTTTTCCATGTTTCCATaGGGTCCAAGCTCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: LVYQGGDCGQRMYFVSYSFSMFP*GPSSCF
Trigger: GAAGCAAGAGCTTGGACCTCATGGAAACATGGAAAA...ACTATAGCTTACAAAATACATTCTCTGACCACAGTCTCCTCCTTGATATACAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR TCA 90 bp TGCTTAGGTAGGTTAGAAGATGAATTTGAAATGCCTCCAGGGATTTCTAACAAGAAGTCTGTTTGCATTTaGGTCCCACATGTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: CLGRLEDEFEMPPGISNKKSVCI*VPHVAF
Trigger: AAAAGCCACATGTGGGACTCAAATGCAAACAGACTT...CTTGTTAGAAATCCCTGGAGGCATTTCAAATTCATCTTCTAACCTACCTAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR TCA 90 bp TTCATCTACACAGCGATGTTTGGTACAATCAATCTTGTTGGCACAAACTACAAAATGAAGTACAGGGTGTaGCGCTCAGTTCACTTCATA +
Preference number: 4 (lower is better)
Translates to: FIYTAMFGTINLVGTNYKMKYRV*RSVHFI
Trigger: TATGAAGTGAACTGAGCGTCACACCCTGTACTTCAT...TTTGTAGTTTGTGCCAACAAGATTGATTGTACCAAACATCGCTGTGTAGATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380809.7
CDS-3UTR TCA 90 bp TGGATTGGAAGAAAGTGGCTTTTCTTCTTAGGAGGTAAGGTAGATGCTCTTTGGGCTAAATACCAATTATaGGAAGTACGAACCTCTCTT +
Preference number: 4 (lower is better)
Translates to: WIGRKWLFFLGGKVDALWAKYQL*EVRTSL
Trigger: AAGAGAGGTTCGTACTTCTCATAATTGGTATTTAGC...CCAAAGAGCATCTACCTTACCTCCTAAGAAGAAAAGCCACTTTCTTCCAATCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp AATATTGCACTGCTCGTTAGACACCATCTCACTTATCCATGTCACCAGTGTAAGGTCAATTCCAATTGTTaGCAGGTATTTAGACACGAA +
Preference number: 4 (lower is better)
Translates to: NIALLVRHHLTYPCHQCKVNSNC*QVFRHE
Trigger: TTCGTGTCTAAATACCTGGCAACAATTGGAATTGAC...CTTACACTGGTGACATGGATAAGTGAGATGGTGTCTAACGAGCAGTGCAATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp TTGGAAACTGAGTCTCAAGACCTAAGAATCAAGCTCAGGCTAAATTTCACCAACTTTCCTCTGCTGATGTaGATAATCTTTAAGTGCGAC +
Preference number: 4 (lower is better)
Translates to: LETESQDLRIKLRLNFTNFPLLM*IIFKCD
Trigger: GTCGCACTTAAAGATTATGCACATCAGCAGAGGAAA...GTTGGTGAAATTTAGCCTGAGCTTGATTCTTAGGTCTTGAGACTCAGTTTCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp TGCTTAGGTAGGTTAGAAGATGAATTTGAAATGCCTCCAGGGATTTCTAACAAGATGACTTCTACATTCTaGTGTGAGGACAGACATGTC +
Preference number: 4 (lower is better)
Translates to: CLGRLEDEFEMPPGISNKMTSTF*CEDRHV
Trigger: GACATGTCTGTCCTCACAGCAGAATGTAGAAGTCAT...CTTGTTAGAAATCCCTGGAGGCATTTCAAATTCATCTTCTAACCTACCTAAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp GAAGTACAGGGTGTGACGCTCAGTTCACTTCATACAAATGCAGGTCATTTCTCAATGTCTGTGAAATTCTaGATGAAGTTAGTGCCAAAA +
Preference number: 4 (lower is better)
Translates to: EVQGVTLSSLHTNAGHFSMSVKF*MKLVPK
Trigger: TTTTGGCACTAACTTCATGCAGAATTTCACAGACAT...TGAGAAATGACCTGCATTTGTATGAAGTGAACTGAGCGTCACACCCTGTACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp GAAATGCCTCCAGGGATTTCTAACAAGTTTAAAAAGTGTTACTTCTTGGTGACTCGCCTAATATTGCACTaGTCGTTAGACACCATCTCA +
Preference number: 4 (lower is better)
Translates to: EMPPGISNKFKKCYFLVTRLILH*SLDTIS
Trigger: TGAGATGGTGTCTAACGAGCAGTGCAATATTAGGCG...AGTCACCAAGAAGTAACACTTTTTAAACTTGTTAGAAATCCCTGGAGGCATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CCA 90 bp GTCTCAAGACCTAAGAATCAAGCTCAGGCTAAATTTCACCAACTCACACATAAGTACTCTTCAGAAATTTaGAGCCCAAGCAGGAATTAC +
Preference number: 4 (lower is better)
Translates to: VSRPKNQAQAKFHQLTHKYSSEI*SPSRNY
Trigger: GTAATTCCTGCTTGGGCTCCAAATTTCTGAAGAGTA...CTTATGTGTGAGTTGGTGAAATTTAGCCTGAGCTTGATTCTTAGGTCTTGAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CCA 90 bp TGGTGGCTGCAGAAGAGGAACAGAGTGAATATCATAAAGGAATGCTCAATTCAGAATGACCCCCAAGTCTaGATTTTTAAATTAACAGGC +
Preference number: 4 (lower is better)
Translates to: WWLQKRNRVNIIKECSIQNDPQV*IFKLTG
Trigger: GCCTGTTAATTTAAAAATCCAGACTTGGGGGTCATT...CTGAATTGAGCATTCCTTTATGATATTCACTCTGTTCCTCTTCTGCAGCCACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp CTTGTATATCAAGGAGGAGACTGTGGTCAGAGAATGTATTTTGTAAGCTATAGTATGACTTCTACATTCTaGTGTGAGGACAGACATGTC +
Preference number: 4 (lower is better)
Translates to: LVYQGGDCGQRMYFVSYSMTSTF*CEDRHV
Trigger: GACATGTCTGTCCTCACAGCAGAATGTAGAAGTCAT...ACTATAGCTTACAAAATACATTCTCTGACCACAGTCTCCTCCTTGATATACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp TTTACAAAACCTTTGATTCAGAGTAAGCTTGATGGGGTACAGTGGCAAAGGAGGCTAATGAATTTTCTCTaGTGTAATTGCTCATCTGTG +
Preference number: 4 (lower is better)
Translates to: FTKPLIQSKLDGVQWQRRLMNFL*CNCSSV
Trigger: CACAGATGAGCAATTACAGCAGAGAAAATTCATTAG...CCTCCTTTGCCACTGTACCCCATCAAGCTTACTCTGAATCAAAGGTTTTGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp GGTATATGGCCATTCTTAACATTAATAATGAAGGTGTTGGAAACTGAGTCTCAACGCCTAATATTGCACTaGTCGTTAGACACCATCTCA +
Preference number: 4 (lower is better)
Translates to: GIWPFLTLIMKVLETESQRLILH*SLDTIS
Trigger: TGAGATGGTGTCTAACGAGCAGTGCAATATTAGGCG...TTGAGACTCAGTTTCCAACACCTTCATTATTAATGTTAAGAATGGCCATATACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CCA 90 bp CTATTTCGAATTCTGCGAATGGCATCTGCTTGTTCTTTGGTGAAACTAGCACTGTATCCAAGATGTATCTaGAACATCTCATTAATGCCT +
Preference number: 4 (lower is better)
Translates to: LFRILRMASACSLVKLALYPRCI*NISLMP
Trigger: AGGCATTAATGAGATGTTCCAGATACATCTTGGATA...CAGTGCTAGTTTCACCAAAGAACAAGCAGATGCCATTCGCAGAATTCGAAATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380809.7
3UTR CAA 72 bp TATGAGAAGTACGAACCTCTCTTCACTTTGCAAAGCTaGCAATGGAAAGTGGTTAGCTATATTTTGCAGCTA +
Preference number: 4 (lower is better)
Translates to: YEKYEPLFTLQS*QWKVVSYILQL
Trigger: TAGCTGCAAAATATAGCTAACCACTTTCCATTGCAAGCTTTGCAAAGTGAAGAGAGGTTCGTACTTCTCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR CAA 72 bp CAAAGACGTCCTTCACTTTCATCTACACAGCGATGTTaGGTACAATCAATCTTGTTGGCACAAACTACAAAT +
Preference number: 4 (lower is better)
Translates to: QRRPSLSSTQRC*VQSILLAQTTN
Trigger: ATTTGTAGTTTGTGCCAACAAGATTGATTGTACCAAACATCGCTGTGTAGATGAAAGTGAAGGACGTCTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380809.7
3UTR CAA 72 bp GGTATATGGCCATTCTTAACATTAATAATGAAGGTGTaGGAAACTGAGTCTCAAGACCTAAGAATCAAGCTC +
Preference number: 4 (lower is better)
Translates to: GIWPFLTLIMKV*ETESQDLRIKL
Trigger: GAGCTTGATTCTTAGGTCTTGAGACTCAGTTTCCAACACCTTCATTATTAATGTTAAGAATGGCCATATACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR TCA 90 bp GGTATATGGCCATTCTTAACATTAATAATGAAGGTGTTGGAAACTGAGTCTCAAAACTTACAGGGGTTCTaGTGTTGTTTGCTTCCATTT +
Preference number: 4 (lower is better)
Translates to: GIWPFLTLIMKVLETESQNLQGF*CCLLPF
Trigger: AAATGGAAGCAAACAACATCAGAACCCCTGTAAGTT...TTGAGACTCAGTTTCCAACACCTTCATTATTAATGTTAAGAATGGCCATATACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR GCA 90 bp GGTATATGGCCATTCTTAACATTAATAATGAAGGTGTTGGAAACTGAGTCTCAAGTCAATTCCAATTGTTaGCAGGTATTTAGACACGAA +
Preference number: 4 (lower is better)
Translates to: GIWPFLTLIMKVLETESQVNSNC*QVFRHE
Trigger: TTCGTGTCTAAATACCTGGCAACAATTGGAATTGAC...TTGAGACTCAGTTTCCAACACCTTCATTATTAATGTTAAGAATGGCCATATACC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CCA 90 bp GAAATGCCTCCAGGGATTTCTAACAAGTTTAAAAAGTGTTACTTCTTGGTGACTTTGCAAAGCTTGCAATaGAAAGTGGTTAGCTATATT +
Preference number: 4 (lower is better)
Translates to: EMPPGISNKFKKCYFLVTLQSLQ*KVVSYI
Trigger: AATATAGCTAACCACTTTCCATTGCAAGCTTTGCAA...AGTCACCAAGAAGTAACACTTTTTAAACTTGTTAGAAATCCCTGGAGGCATTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR CAA 72 bp CCAGGGATTTCTAACAAGTTTAAAAAGTGTTACTTCTaGGTGACTCAGATGTTGAAGACATGGCTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: PGISNKFKKCYF*VTQMLKTWLFF
Trigger: AAAGAAAAGCCATGTCTTCAACATCTGAGTCACCAAGAAGTAACACTTTTTAAACTTGTTAGAAATCCCTGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
3UTR CAA 72 bp AATACCAATTATGAGAAGTACGAACCTCTCTTCACTTaGCAAAGCTTGCAATGGAAAGTGGTTAGCTATATT +
Preference number: 4 (lower is better)
Translates to: NTNYEKYEPLFT*QSLQWKVVSYI
Trigger: AATATAGCTAACCACTTTCCATTGCAAGCTTTGCAAAGTGAAGAGAGGTTCGTACTTCTCATAATTGGTATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS GCA 90 bp TGCTCTCGTCACCGCCTCGCCTCCGCTGCTCGCCATCCCCGCCGCTaGCTGGCAGCAGGCGCGGGCGGTTGGGAGCGTGGGGAGCCGGGG +
Preference number: 5 (lower is better)
Translates to: CSRHRLASAARHPRR*LAAGAGGWERGEPG
Trigger: CCCCGGCTCCCCACGCTCCCAACCGCCCGCGCCTGCTGCCAGGCAGCGGCGGGGATGGCGAGCAGCGGAGGCGAGGCGGTGACGAGAGCA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534855.5
CDS GCA 90 bp CCGCTGGCCCGTCCCTCAGGCCTCCTCGTCCAATGGCGGAGCCGCTaGTCTCGTCACCGCCTCGCCTCCGCTGCTCGCCATCCCCGCCGC +
Preference number: 5 (lower is better)
Translates to: PLARPSGLLVQWRSR*SRHRLASAARHPRR
Trigger: GCGGCGGGGATGGCGAGCAGCGGAGGCGAGGCGGTGACGAGAGCAGCGGCTCCGCCATTGGACGAGGAGGCCTGAGGGACGGGCCAGCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380809.7
ENST00000534855.5
CDS GCA 90 bp CATGGCCCTGGCTCTCTCGGGGCCACCCGCCTCGGTCTCTTCTTGTaGACCGCTGGCCCGTCCCTCAGGCCTCCTCGTCCAATGGCGGAG +
Preference number: 5 (lower is better)
Translates to: HGPGSLGATRLGLFL*TAGPSLRPPRPMAE
Trigger: CTCCGCCATTGGACGAGGAGGCCTGAGGGACGGGCCAGCGGTGCACAAGAAGAGACCGAGGCGGGTGGCCCCGAGAGAGCCAGGGCCATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380809.7
ENST00000534855.5
CDS CCA 90 bp TCTTCTTGTGCACCGCTGGCCCGTCCCTCAGGCCTCCTCGTCCAATaGCGGAGCCGCTGCTCTCGTCACCGCCTCGCCTCCGCTGCTCGC +
Preference number: 5 (lower is better)
Translates to: SSCAPLARPSGLLVQ*RSRCSRHRLASAAR
Trigger: GCGAGCAGCGGAGGCGAGGCGGTGACGAGAGCAGCGGCTCCGCCATTGGACGAGGAGGCCTGAGGGACGGGCCAGCGGTGCACAAGAAGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380809.7
ENST00000534855.5
CDS CCA 90 bp TGGCTCTCTCGGGGCCACCCGCCTCGGTCTCTTCTTGTGCACCGCTaGCCCGTCCCTCAGGCCTCCTCGTCCAATGGCGGAGCCGCTGCT +
Preference number: 5 (lower is better)
Translates to: WLSRGHPPRSLLVHR*PVPQASSSNGGAAA
Trigger: AGCAGCGGCTCCGCCATTGGACGAGGAGGCCTGAGGGACGGGCCAGCGGTGCACAAGAAGAGACCGAGGCGGGTGGCCCCGAGAGAGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380809.7
ENST00000534855.5
CDS CCA 90 bp GGAGAGACCTGCCGGGCTCCTTCCGCTTCGGCATGTTGGCCTCCATaGCCCTGGCTCTCTCGGGGCCACCCGCCTCGGTCTCTTCTTGTG +
Preference number: 5 (lower is better)
Translates to: GETCRAPSASACWPP*PWLSRGHPPRSLLV
Trigger: CACAAGAAGAGACCGAGGCGGGTGGCCCCGAGAGAGCCAGGGCCATGGAGGCCAACATGCCGAAGCGGAAGGAGCCCGGCAGGTCTCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264711.7
ENST00000380809.7
ENST00000534855.5
CDS-3UTR CAA 90 bp GGCGGATACTACTGCAGCTGGCTCCTCCAAGTACTTCTGTCTTGGGGCCTGATTCGCCTCGGTCTCTTCTaGTGCACCGCTGGCCCGTCC +
Preference number: 5 (lower is better)
Translates to: GGYYCSWLLQVLLSWGLIRLGLF*CTAGPS
Trigger: GGACGGGCCAGCGGTGCACAAGAAGAGACCGAGGCG...AATCAGGCCCCAAGACAGAAGTACTTGGAGGAGCCAGCTGCAGTAGTATCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534855.5
CDS-3UTR CAA 90 bp GTCTCTCCTACTGCATCAAGCTTGCCCCAAGCTTGGCTGGCCTTTCCTCTGCTGCCTACTGCATCAAGCTaGCCCCAAGCTTGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: VSPTASSLPQAWLAFPLLPTASS*PQAWLA
Trigger: GGCCAGCCAAGCTTGGGGCAAGCTTGATGCAGTAGG...CAGCAGAGGAAAGGCCAGCCAAGCTTGGGGCAAGCTTGATGCAGTAGGAGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp GTAAGACGCGCACTGTCACTGTCAAAGGCAACAAGCACATGGCTTACAGCTCCATTCCGCTTCGGCATGTaGGCCTCCATGGCCCTGGCT +
Preference number: 5 (lower is better)
Translates to: VRRALSLSKATSTWLTAPFRFGM*ASMALA
Trigger: AGCCAGGGCCATGGAGGCCAACATGCCGAAGCGGAA...TGGAGCTGTAAGCCATGTGCTTGTTGCCTTTGACAGTGACAGTGCGCGTCTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp GAGTTGTCGTGTCAATTCGGGCTGACGCTACCGTGCACGATCCCTCATTCATATCCTACTGCATCAAGCTaGCCCCAAGCTTGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: ELSCQFGLTLPCTIPHSYPTASS*PQAWLA
Trigger: GGCCAGCCAAGCTTGGGGCAAGCTTGATGCAGTAGG...ATATGAATGAGGGATCGTGCACGGTAGCGTCAGCCCGAATTGACACGACAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp GGCGGATACTACTGCAGCTGGCTCCTCCAAGTACTTCTGTCTTGGGGCCTGATTAAACTAGCACTGCTATaGGTGGTAGGGCGTTTCCCG +
Preference number: 5 (lower is better)
Translates to: GGYYCSWLLQVLLSWGLIKLALL*VVGRFP
Trigger: CGGGAAACGCCCTACCACCAATAGCAGTGCTAGTTT...AATCAGGCCCCAAGACAGAAGTACTTGGAGGAGCCAGCTGCAGTAGTATCCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264711.7
CDS-3UTR CAA 90 bp TCTTGGGGCCTGATTCCTCATTCCCAGGTGCACAGTGCTCTCTACTGCTACCAGATGAGGTCCAAGCTCTaGCTTCATTTCTGCCAGCCA +
Preference number: 5 (lower is better)
Translates to: SWGLIPHSQVHSALYCYQMRSKL*LHFCQP
Trigger: TGGCTGGCAGAAATGAAGCAAGAGCTTGGACCTCAT...CTGGTAGCAGTAGAGAGCACTGTGCACCTGGGAATGAGGAATCAGGCCCCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp GAGTTGTCGTGTCAATTCGGGCTGACGCTACCGTGCACGATCCCTCATTCATATTCTCTTAGGACTGGCTaGTCTCTCCCACTGGTGGCT +
Preference number: 5 (lower is better)
Translates to: ELSCQFGLTLPCTIPHSYSLRTG*SLPLVA
Trigger: AGCCACCAGTGGGAGAGACAAGCCAGTCCTAAGAGA...ATATGAATGAGGGATCGTGCACGGTAGCGTCAGCCCGAATTGACACGACAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp TGGGGCCTGATTCCTCATTCCCAGGTGCACAGTGCTCTCTACTGCTACCAGCAACAAGATCTTACTATGTaGCCCAGGTGGGACTTGAGC +
Preference number: 5 (lower is better)
Translates to: WGLIPHSQVHSALYCYQQQDLTM*PRWDLS
Trigger: GCTCAAGTCCCACCTGGGCAACATAGTAAGATCTTG...TTGCTGGTAGCAGTAGAGAGCACTGTGCACCTGGGAATGAGGAATCAGGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp ATTTCTATGGCAAGGGAAAGGCCTCAGATCCAGGGACAGGATAGGCAGCAGCCACCAACAGGGCCTCTATaGCACCGCCTAATATTGCAC +
Preference number: 5 (lower is better)
Translates to: ISMARERPQIQGQDRQQPPTGPL*HRLILH
Trigger: GTGCAATATTAGGCGGTGCAATAGAGGCCCTGTTGG...TGGCTGCTGCCTATCCTGTCCCTGGATCTGAGGCCTTTCCCTTGCCATAGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp GAGTTGTCGTGTCAATTCGGGCTGACGCTACCGTGCACGATCCCTCATTCATATCCGAAGAACTCTGGGTaGGAGTTCTGTAGCCTCAGA +
Preference number: 5 (lower is better)
Translates to: ELSCQFGLTLPCTIPHSYPKNSG*EFCSLR
Trigger: TCTGAGGCTACAGAACTCCAACCCAGAGTTCTTCGG...ATATGAATGAGGGATCGTGCACGGTAGCGTCAGCCCGAATTGACACGACAACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp GTAAGACGCGCACTGTCACTGTCAAAGGCAACAAGCACATGGCTTACAGCTCCAGCCACACATTCAGAGTaGTCGTGTCAATTCGGGCTG +
Preference number: 5 (lower is better)
Translates to: VRRALSLSKATSTWLTAPATHSE*SCQFGL
Trigger: CAGCCCGAATTGACACGACAACTCTGAATGTGTGGC...TGGAGCTGTAAGCCATGTGCTTGTTGCCTTTGACAGTGACAGTGCGCGTCTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp TCTTGGGGCCTGATTCCTCATTCCCAGGTGCACAGTGCTCTCTACTGCTACCAGCTTGTGATGTTGTCATaGTTCAATGGGGCACAGCTC +
Preference number: 5 (lower is better)
Translates to: SWGLIPHSQVHSALYCYQLVMLS*FNGAQL
Trigger: GAGCTGTGCCCCATTGAACAATGACAACATCACAAG...CTGGTAGCAGTAGAGAGCACTGTGCACCTGGGAATGAGGAATCAGGCCCCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp CTGCTTTCACAGTTAAGGGGGAAGAACGCCCAGGGGCAATCAATGCAGGAAGCTTTGCACCGCCTAATATaGCACTGCTCGTTAGACACC +
Preference number: 5 (lower is better)
Translates to: LLSQLRGKNAQGQSMQEALHRLI*HCSLDT
Trigger: GGTGTCTAACGAGCAGTGCAATATTAGGCGGTGCAA...AGCTTCCTGCATTGATTGCCCCTGGGCGTTCTTCCCCCTTAACTGTGAAAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp ACATTTGTCAGGGTGAAGAAGCACAGCAAGTTTCCGATACGCTTTATTGACTTCTTCCGCTTCGGCATGTaGGCCTCCATGGCCCTGGCT +
Preference number: 5 (lower is better)
Translates to: TFVRVKKHSKFPIRFIDFFRFGM*ASMALA
Trigger: AGCCAGGGCCATGGAGGCCAACATGCCGAAGCGGAA...GAAGTCAATAAAGCGTATCGGAAACTTGCTGTGCTTCTTCACCCTGACAAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380809.7
CDS-3UTR CAA 90 bp CTGCTTTCACAGTTAAGGGGGAAGAACGCCCAGGGGCAATCAATGCAGGAAGCTAAGTACAGGAACCCTTaGCTTTCAGCCCAAAGACGT +
Preference number: 5 (lower is better)
Translates to: LLSQLRGKNAQGQSMQEAKYRNP*LSAQRR
Trigger: ACGTCTTTGGGCTGAAAGCAAAGGGTTCCTGTACTT...AGCTTCCTGCATTGATTGCCCCTGGGCGTTCTTCCCCCTTAACTGTGAAAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp CTGTGGCAAAGGCTGGCAGTAAGACAAGGGCTAAGCCTCATAAGGAGTCTCTCCGCGAATGGCATCTGCTaGTTCTTTGGTGAAACTAGC +
Preference number: 5 (lower is better)
Translates to: LWQRLAVRQGLSLIRSLSANGIC*FFGETS
Trigger: GCTAGTTTCACCAAAGAACAAGCAGATGCCATTCGC...GGAGAGACTCCTTATGAGGCTTAGCCCTTGTCTTACTGCCAGCCTTTGCCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264711.7
CDS-3UTR CAA 90 bp CTGTGGCAAAGGCTGGCAGTAAGACAAGGGCTAAGCCTCATAAGGAGTCTCTCCCCAAAGGATCCACACTaGCCTCTGATCAACCAGATT +
Preference number: 5 (lower is better)
Translates to: LWQRLAVRQGLSLIRSLSPKDPH*PLINQI
Trigger: AATCTGGTTGATCAGAGGCAAGTGTGGATCCTTTGG...GGAGAGACTCCTTATGAGGCTTAGCCCTTGTCTTACTGCCAGCCTTTGCCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp CTGTGGCAAAGGCTGGCAGTAAGACAAGGGCTAAGCCTCATAAGGAGTCTCTCCCTTGTGATGTTGTCATaGTTCAATGGGGCACAGCTC +
Preference number: 5 (lower is better)
Translates to: LWQRLAVRQGLSLIRSLSLVMLS*FNGAQL
Trigger: GAGCTGTGCCCCATTGAACAATGACAACATCACAAG...GGAGAGACTCCTTATGAGGCTTAGCCCTTGTCTTACTGCCAGCCTTTGCCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp ATTTCTATGGCAAGGGAAAGGCCTCAGATCCAGGGACAGGATAGGCAGCAGCCACTTCCCCTTGTGATGTaGTCATTGTTCAATGGGGCA +
Preference number: 5 (lower is better)
Translates to: ISMARERPQIQGQDRQQPLPLVM*SLFNGA
Trigger: TGCCCCATTGAACAATGACAACATCACAAGGGGAAG...TGGCTGCTGCCTATCCTGTCCCTGGATCTGAGGCCTTTCCCTTGCCATAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp CACTGCTCGTTAGACACCATCTCACTTATCCATGTCACCAGTGTAAGCTTTTGTCCCATGGAGATGACTTaGATGCGGAGAGACCTGCCG +
Preference number: 5 (lower is better)
Translates to: HCSLDTISLIHVTSVSFCPMEMT*MRRDLP
Trigger: CGGCAGGTCTCTCCGCATCAAAGTCATCTCCATGGG...ACAAAAGCTTACACTGGTGACATGGATAAGTGAGATGGTGTCTAACGAGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp TTCAAAGTACAGGAACCCTTTGCTTTCAGCCCAAAGACGTCCTTCACTTTCATCCCCATGGAGATGACTTaGATGCGGAGAGACCTGCCG +
Preference number: 5 (lower is better)
Translates to: FKVQEPFAFSPKTSFTFIPMEMT*MRRDLP
Trigger: CGGCAGGTCTCTCCGCATCAAAGTCATCTCCATGGG...GATGAAAGTGAAGGACGTCTTTGGGCTGAAAGCAAAGGGTTCCTGTACTTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380809.7
CDS-3UTR CAA 90 bp GTCTCTCCTACTGCATCAAGCTTGCCCCAAGCTTGGCTGGCCTTTCCTCTGCTGTCTACACAGCGATGTTaGGTACAATCAATCTTGTTG +
Preference number: 5 (lower is better)
Translates to: VSPTASSLPQAWLAFPLLSTQRC*VQSILL
Trigger: CAACAAGATTGATTGTACCAAACATCGCTGTGTAGA...CAGCAGAGGAAAGGCCAGCCAAGCTTGGGGCAAGCTTGATGCAGTAGGAGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp TCATTTCTGCCAGCCACGCATCAAGGGCGTCAAAGGAGTCTTTCTGCCCAACATGCGAATGGCATCTGCTaGTTCTTTGGTGAAACTAGC +
Preference number: 5 (lower is better)
Translates to: SFLPATHQGRQRSLSAQHANGIC*FFGETS
Trigger: GCTAGTTTCACCAAAGAACAAGCAGATGCCATTCGC...ATGTTGGGCAGAAAGACTCCTTTGACGCCCTTGATGCGTGGCTGGCAGAAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380809.7
CDS-3UTR CAA 90 bp GCTCTTGCTTCATTTCTGCCAGCCACGCATCAAGGGCGTCAAAGGAGTCTTTCTTTCCGATACGCTTTATaGACTTCATCCCTTGAGGCC +
Preference number: 5 (lower is better)
Translates to: ALASFLPATHQGRQRSLSFRYAL*TSSLEA
Trigger: GGCCTCAAGGGATGAAGTCAATAAAGCGTATCGGAA...AGAAAGACTCCTTTGACGCCCTTGATGCGTGGCTGGCAGAAATGAAGCAAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380809.7
CDS-3UTR CAA 90 bp GTCTCTCCTACTGCATCAAGCTTGCCCCAAGCTTGGCTGGCCTTTCCTCTGCTGTTACTCTTCAGAAATTaGGAGCCCAAGCAGGAATTA +
Preference number: 5 (lower is better)
Translates to: VSPTASSLPQAWLAFPLLLLFRN*EPKQEL
Trigger: TAATTCCTGCTTGGGCTCCAAATTTCTGAAGAGTAA...CAGCAGAGGAAAGGCCAGCCAAGCTTGGGGCAAGCTTGATGCAGTAGGAGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp GAGTTGTCGTGTCAATTCGGGCTGACGCTACCGTGCACGATCCCTCATTCATATTGCAGTGGGCTTGGATaGGAAGAAAGTGGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: ELSCQFGLTLPCTIPHSYCSGLG*EESGFS
Trigger: AGAAAAGCCACTTTCTTCCAATCCAAGCCCACTGCA...ATATGAATGAGGGATCGTGCACGGTAGCGTCAGCCCGAATTGACACGACAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp GTCTCTCCTACTGCATCAAGCTTGCCCCAAGCTTGGCTGGCCTTTCCTCTGCTGTTGGTGACTCAGATGTaGAAGACATGGCTTTTCTTT +
Preference number: 5 (lower is better)
Translates to: VSPTASSLPQAWLAFPLLLVTQM*KTWLFF
Trigger: AAAGAAAAGCCATGTCTTCAACATCTGAGTCACCAA...CAGCAGAGGAAAGGCCAGCCAAGCTTGGGGCAAGCTTGATGCAGTAGGAGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp GGCGGATACTACTGCAGCTGGCTCCTCCAAGTACTTCTGTCTTGGGGCCTGATTGAACCTCTCTTCACTTaGCAAAGCTTGCAATGGAAA +
Preference number: 5 (lower is better)
Translates to: GGYYCSWLLQVLLSWGLIEPLFT*QSLQWK
Trigger: TTTCCATTGCAAGCTTTGCAAAGTGAAGAGAGGTTC...AATCAGGCCCCAAGACAGAAGTACTTGGAGGAGCCAGCTGCAGTAGTATCCGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp TTCATCTACACAGCGATGTTTGGTACAATCAATCTTGTTGGCACAAACTACAAACGCCTCGGTCTCTTCTaGTGCACCGCTGGCCCGTCC +
Preference number: 5 (lower is better)
Translates to: FIYTAMFGTINLVGTNYKRLGLF*CTAGPS
Trigger: GGACGGGCCAGCGGTGCACAAGAAGAGACCGAGGCG...TTTGTAGTTTGTGCCAACAAGATTGATTGTACCAAACATCGCTGTGTAGATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380809.7
CDS-3UTR CAA 90 bp ACATTCAGAGTTGTCGTGTCAATTCGGGCTGACGCTACCGTGCACGATCCCTCAAAAGTCTGTTTGCATTaGAGTCCCACATGTGGCTTT +
Preference number: 5 (lower is better)
Translates to: TFRVVVSIRADATVHDPSKVCLH*SPTCGF
Trigger: AAAGCCACATGTGGGACTCAAATGCAAACAGACTTT...TGAGGGATCGTGCACGGTAGCGTCAGCCCGAATTGACACGACAACTCTGAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp GGAAGAAAGTGGCTTTTCTTCTTAGGAGGTAAGGTAGATGCTCTTTGGCAATCGTCTCTTAGGACTGGCTaGTCTCTCCCACTGGTGGCT +
Preference number: 5 (lower is better)
Translates to: GRKWLFFLGGKVDALWQSSLRTG*SLPLVA
Trigger: AGCCACCAGTGGGAGAGACAAGCCAGTCCTAAGAGA...CGATTGCCAAAGAGCATCTACCTTACCTCCTAAGAAGAAAAGCCACTTTCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp CTGCTTTCACAGTTAAGGGGGAAGAACGCCCAGGGGCAATCAATGCAGGAAGCTGAACCTCTCTTCACTTaGCAAAGCTTGCAATGGAAA +
Preference number: 5 (lower is better)
Translates to: LLSQLRGKNAQGQSMQEAEPLFT*QSLQWK
Trigger: TTTCCATTGCAAGCTTTGCAAAGTGAAGAGAGGTTC...AGCTTCCTGCATTGATTGCCCCTGGGCGTTCTTCCCCCTTAACTGTGAAAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp GAAATGCCTCCAGGGATTTCTAACAAGTTTAAAAAGTGTTACTTCTTGGTGACTTTCCGCTTCGGCATGTaGGCCTCCATGGCCCTGGCT +
Preference number: 5 (lower is better)
Translates to: EMPPGISNKFKKCYFLVTFRFGM*ASMALA
Trigger: AGCCAGGGCCATGGAGGCCAACATGCCGAAGCGGAA...AGTCACCAAGAAGTAACACTTTTTAAACTTGTTAGAAATCCCTGGAGGCATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp ATCTGCTTGTTCTTTGGTGAAACTAGCACTGCTATTGGTGGTAGGGCGTTTCCCAAGTACAGGAACCCTTaGCTTTCAGCCCAAAGACGT +
Preference number: 5 (lower is better)
Translates to: ICLFFGETSTAIGGRAFPKYRNP*LSAQRR
Trigger: ACGTCTTTGGGCTGAAAGCAAAGGGTTCCTGTACTT...GGGAAACGCCCTACCACCAATAGCAGTGCTAGTTTCACCAAAGAACAAGCAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380809.7
CDS-3UTR CAA 90 bp TGTCCCAACTGTCTTTACTATTTCGAATTCTGCGAATGGCATCTGCTTGTTCTTCTTGAGGCCCCAGGTTaGACTCCCAGCATGTCCCAA +
Preference number: 5 (lower is better)
Translates to: CPNCLYYFEFCEWHLLVLLEAPG*TPSMSQ
Trigger: TTGGGACATGCTGGGAGTCAAACCTGGGGCCTCAAG...AAGAACAAGCAGATGCCATTCGCAGAATTCGAAATAGTAAAGACAGTTGGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380809.7
CDS-3UTR CAA 90 bp CCCAGGGGCAATCAATGCAGGAAGCTAACCAACACTGTCCAGCTCTCCAGCAAAACAGGGGTTCTGATGTaGTTTGCTTCCATTTTTGTT +
Preference number: 5 (lower is better)
Translates to: PRGNQCRKLTNTVQLSSKTGVLM*FASIFV
Trigger: AACAAAAATGGAAGCAAACAACATCAGAACCCCTGT...TTTGCTGGAGAGCTGGACAGTGTTGGTTAGCTTCCTGCATTGATTGCCCCTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp TACAGTGGCAAAGGAGGTGACATTCCCATGCCTAGTGGAATTAGTTGTAAGACGCCAAGTACTTCTGTCTaGGGGCCTGATTCCTCATTC +
Preference number: 5 (lower is better)
Translates to: YSGKGGDIPMPSGISCKTPSTSV*GPDSSF
Trigger: GAATGAGGAATCAGGCCCCAAGACAGAAGTACTTGG...CGTCTTACAACTAATTCCACTAGGCATGGGAATGTCACCTCCTTTGCCACTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp ACTGTCAAAGGCAACAAGCACATGGCTTACAGCTCCACCTTTCTAACTTTTGGCTTGCACCGCCTAATATaGCACTGCTCGTTAGACACC +
Preference number: 5 (lower is better)
Translates to: TVKGNKHMAYSSTFLTFGLHRLI*HCSLDT
Trigger: GGTGTCTAACGAGCAGTGCAATATTAGGCGGTGCAA...GCCAAAAGTTAGAAAGGTGGAGCTGTAAGCCATGTGCTTGTTGCCTTTGACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp GGAAGAAAGTGGCTTTTCTTCTTAGGAGGTAAGGTAGATGCTCTTTGGCAATCGCCAACAGGGCCTCTATaGCACCGCCTAATATTGCAC +
Preference number: 5 (lower is better)
Translates to: GRKWLFFLGGKVDALWQSPTGPL*HRLILH
Trigger: GTGCAATATTAGGCGGTGCAATAGAGGCCCTGTTGG...CGATTGCCAAAGAGCATCTACCTTACCTCCTAAGAAGAAAAGCCACTTTCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp TTGGAAACTGAGTCTCAAGACCTAAGAATCAAGCTCAGGCTAAATTTCACCAACTTCCCCACTTCGGCGTaGCCCATGGAGATGACTTTG +
Preference number: 5 (lower is better)
Translates to: LETESQDLRIKLRLNFTNFPTSA*PMEMTL
Trigger: CAAAGTCATCTCCATGGGCAACGCCGAAGTGGGGAA...GTTGGTGAAATTTAGCCTGAGCTTGATTCTTAGGTCTTGAGACTCAGTTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp GCTCAATTCAGAACTGTATCACCTCATTTTACAAACTCCCAAAGGGCTGCCAAGATGAGGTCCAAGCTCTaGCTTCATTTCTGCCAGCCA +
Preference number: 5 (lower is better)
Translates to: AQFRTVSPHFTNSQRAAKMRSKL*LHFCQP
Trigger: TGGCTGGCAGAAATGAAGCAAGAGCTTGGACCTCAT...CTTGGCAGCCCTTTGGGAGTTTGTAAAATGAGGTGATACAGTTCTGAATTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp GGTTTGACTCCCAGCATGTCCCAACTGTCTTTACTATTTCGAATTCTGCGAATGATGAGGTCCAAGCTCTaGCTTCATTTCTGCCAGCCA +
Preference number: 5 (lower is better)
Translates to: GLTPSMSQLSLLFRILRMMRSKL*LHFCQP
Trigger: TGGCTGGCAGAAATGAAGCAAGAGCTTGGACCTCAT...CATTCGCAGAATTCGAAATAGTAAAGACAGTTGGGACATGCTGGGAGTCAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380809.7
CDS-3UTR CAA 90 bp GTCAGGGTGAAGAAGCACAGCAAGTTTCCGATACGCTTTATTGACTTCATCCCTGCATTCACAACTGCTTaGAAGGCATCTTCACTGCCA +
Preference number: 5 (lower is better)
Translates to: VRVKKHSKFPIRFIDFIPAFTTA*KASSLP
Trigger: TGGCAGTGAAGATGCCTTCAAAGCAGTTGTGAATGC...AGGGATGAAGTCAATAAAGCGTATCGGAAACTTGCTGTGCTTCTTCACCCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380809.7
CDS-3UTR CAA 90 bp CACATGAATGAAAAGAGCAGTGAGATTCTGGGAAGGAAAACTCCACGTTGGTTACCGAAGAACTCTGGGTaGGAGTTCTGTAGCCTCAGA +
Preference number: 5 (lower is better)
Translates to: HMNEKSSEILGRKTPRWLPKNSG*EFCSLR
Trigger: TCTGAGGCTACAGAACTCCAACCCAGAGTTCTTCGG...TAACCAACGTGGAGTTTTCCTTCCCAGAATCTCACTGCTCTTTTCATTCATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp TGGGGTACAGTGGCAAAGGAGGTGACATTCCCATGCCTAGTGGAATTAGTTGTAAAACTGATTCAGAGCTaGCAGTGGCTGCTTACTTAC +
Preference number: 5 (lower is better)
Translates to: WGTVAKEVTFPCLVELVVKLIQS*QWLLTY
Trigger: GTAAGTAAGCAGCCACTGCAAGCTCTGAATCAGTTT...TACAACTAATTCCACTAGGCATGGGAATGTCACCTCCTTTGCCACTGTACCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp CTTGTATATCAAGGAGGAGACTGTGGTCAGAGAATGTATTTTGTAAGCTATAGTCTTGAGGCCCCAGGTTaGACTCCCAGCATGTCCCAA +
Preference number: 5 (lower is better)
Translates to: LVYQGGDCGQRMYFVSYSLEAPG*TPSMSQ
Trigger: TTGGGACATGCTGGGAGTCAAACCTGGGGCCTCAAG...ACTATAGCTTACAAAATACATTCTCTGACCACAGTCTCCTCCTTGATATACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264711.7
CDS-3UTR CAA 90 bp GAAGTACAGGGTGTGACGCTCAGTTCACTTCATACAAATGCAGGTCATTTCTCATTCCGATACGCTTTATaGACTTCATCCCTTGAGGCC +
Preference number: 5 (lower is better)
Translates to: EVQGVTLSSLHTNAGHFSFRYAL*TSSLEA
Trigger: GGCCTCAAGGGATGAAGTCAATAAAGCGTATCGGAA...TGAGAAATGACCTGCATTTGTATGAAGTGAACTGAGCGTCACACCCTGTACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000380809.7
CDS-3UTR CAA 90 bp TGGGGTACAGTGGCAAAGGAGGTGACATTCCCATGCCTAGTGGAATTAGTTGTAAAAGTCTGTTTGCATTaGAGTCCCACATGTGGCTTT +
Preference number: 5 (lower is better)
Translates to: WGTVAKEVTFPCLVELVVKVCLH*SPTCGF
Trigger: AAAGCCACATGTGGGACTCAAATGCAAACAGACTTT...TACAACTAATTCCACTAGGCATGGGAATGTCACCTCCTTTGCCACTGTACCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp TGGATTGGAAGAAAGTGGCTTTTCTTCTTAGGAGGTAAGGTAGATGCTCTTTGGCAAGATCTTACTATGTaGCCCAGGTGGGACTTGAGC +
Preference number: 5 (lower is better)
Translates to: WIGRKWLFFLGGKVDALWQDLTM*PRWDLS
Trigger: GCTCAAGTCCCACCTGGGCAACATAGTAAGATCTTG...CCAAAGAGCATCTACCTTACCTCCTAAGAAGAAAAGCCACTTTCTTCCAATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp GGAAGAAAGTGGCTTTTCTTCTTAGGAGGTAAGGTAGATGCTCTTTGGCAATCGCTTCCCCTTGTGATGTaGTCATTGTTCAATGGGGCA +
Preference number: 5 (lower is better)
Translates to: GRKWLFFLGGKVDALWQSLPLVM*SLFNGA
Trigger: TGCCCCATTGAACAATGACAACATCACAAGGGGAAG...CGATTGCCAAAGAGCATCTACCTTACCTCCTAAGAAGAAAAGCCACTTTCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS TCA 90 bp ACTTCATCCCTGGAACATCTCATTAATGCCTTCTCCAGTTTGTGCTaGAGTTTCAAAGTACAGGAACCCTTTGCTTTCAGCCCAAAGACG +
Preference number: 5 (lower is better)
Translates to: TSSLEHLINAFSSLC*SFKVQEPFAFSPKT
Trigger: CGTCTTTGGGCTGAAAGCAAAGGGTTCCTGTACTTTGAAACTTCAGCACAAACTGGAGAAGGCATTAATGAGATGTTCCAGGGATGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534855.5
CDS-3UTR CAA 90 bp TTCATCTACACAGCGATGTTTGGTACAATCAATCTTGTTGGCACAAACTACAAATTCCCCACTTCGGCGTaGCCCATGGAGATGACTTTG +
Preference number: 5 (lower is better)
Translates to: FIYTAMFGTINLVGTNYKFPTSA*PMEMTL
Trigger: CAAAGTCATCTCCATGGGCAACGCCGAAGTGGGGAA...TTTGTAGTTTGTGCCAACAAGATTGATTGTACCAAACATCGCTGTGTAGATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380809.7
CDS-3UTR CAA 90 bp TGGGGTACAGTGGCAAAGGAGGTGACATTCCCATGCCTAGTGGAATTAGTTGTATCTACACAGCGATGTTaGGTACAATCAATCTTGTTG +
Preference number: 5 (lower is better)
Translates to: WGTVAKEVTFPCLVELVVSTQRC*VQSILL
Trigger: CAACAAGATTGATTGTACCAAACATCGCTGTGTAGA...TACAACTAATTCCACTAGGCATGGGAATGTCACCTCCTTTGCCACTGTACCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp TTCTATCCAAGATGTATCTGGAACATCTCATTAATGCCTTCTCCAGTTTGTGCTAAACTAGCACTGCTATaGGTGGTAGGGCGTTTCCCG +
Preference number: 5 (lower is better)
Translates to: FYPRCIWNISLMPSPVCAKLALL*VVGRFP
Trigger: CGGGAAACGCCCTACCACCAATAGCAGTGCTAGTTT...AGCACAAACTGGAGAAGGCATTAATGAGATGTTCCAGATACATCTTGGATAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380809.7
CDS-3UTR CAA 90 bp TCGTTAGACACCATCTCACTTATCCATGTCACCAGTGTAAGCTTTTGTCTTCTCGCATTCACAACTGCTTaGAAGGCATCTTCACTGCCA +
Preference number: 5 (lower is better)
Translates to: SLDTISLIHVTSVSFCLLAFTTA*KASSLP
Trigger: TGGCAGTGAAGATGCCTTCAAAGCAGTTGTGAATGC...GAGAAGACAAAAGCTTACACTGGTGACATGGATAAGTGAGATGGTGTCTAACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp CTCCCAGCATGTCCCAACTGTCTTTACTATTTCGAATTCTGCGAATGGCATCTGAAAGTCTGTTTGCATTaGAGTCCCACATGTGGCTTT +
Preference number: 5 (lower is better)
Translates to: LPACPNCLYYFEFCEWHLKVCLH*SPTCGF
Trigger: AAAGCCACATGTGGGACTCAAATGCAAACAGACTTT...CAGATGCCATTCGCAGAATTCGAAATAGTAAAGACAGTTGGGACATGCTGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380809.7
CDS-3UTR CAA 90 bp CTGCCAAGAGTCATCATTATAGATCGATGGGTTAAAATACCACCTAAGGAACTCCCAAGTACTTCTGTCTaGGGGCCTGATTCCTCATTC +
Preference number: 5 (lower is better)
Translates to: LPRVIIIDRWVKIPPKELPSTSV*GPDSSF
Trigger: GAATGAGGAATCAGGCCCCAAGACAGAAGTACTTGG...GAGTTCCTTAGGTGGTATTTTAACCCATCGATCTATAATGATGACTCTTGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp TGGATTGGAAGAAAGTGGCTTTTCTTCTTAGGAGGTAAGGTAGATGCTCTTTGGTGCAGTGGGCTTGGATaGGAAGAAAGTGGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: WIGRKWLFFLGGKVDALWCSGLG*EESGFS
Trigger: AGAAAAGCCACTTTCTTCCAATCCAAGCCCACTGCA...CCAAAGAGCATCTACCTTACCTCCTAAGAAGAAAAGCCACTTTCTTCCAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp GTGCTCTCTACTGCTACCAGCAACCATTTCTATGGCAAGGGAAAGGCCTCAGATTTAATAATGAAGGTGTaGGAAACTGAGTCTCAAGAC +
Preference number: 5 (lower is better)
Translates to: VLSTATSNHFYGKGKASDLIMKV*ETESQD
Trigger: GTCTTGAGACTCAGTTTCCAACACCTTCATTATTAA...ATCTGAGGCCTTTCCCTTGCCATAGAAATGGTTGCTGGTAGCAGTAGAGAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp ACTGTCAAAGGCAACAAGCACATGGCTTACAGCTCCACCTTTCTAACTTTTGGCTTCCGATACGCTTTATaGACTTCATCCCTGGAACAT +
Preference number: 5 (lower is better)
Translates to: TVKGNKHMAYSSTFLTFGFRYAL*TSSLEH
Trigger: ATGTTCCAGGGATGAAGTCAATAAAGCGTATCGGAA...GCCAAAAGTTAGAAAGGTGGAGCTGTAAGCCATGTGCTTGTTGCCTTTGACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534855.5
CDS-3UTR CAA 90 bp GGTATATGGCCATTCTTAACATTAATAATGAAGGTGTTGGAAACTGAGTCTCAATTCCCCACTTCGGCGTaGCCCATGGAGATGACTTTG +
Preference number: 5 (lower is better)
Translates to: GIWPFLTLIMKVLETESQFPTSA*PMEMTL
Trigger: CAAAGTCATCTCCATGGGCAACGCCGAAGTGGGGAA...TTGAGACTCAGTTTCCAACACCTTCATTATTAATGTTAAGAATGGCCATATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp CTGCCAAGAGTCATCATTATAGATCGATGGGTTAAAATACCACCTAAGGAACTCGCATTCACAACTGCTTaGAAGGCATCTTCACTGCCA +
Preference number: 5 (lower is better)
Translates to: LPRVIIIDRWVKIPPKELAFTTA*KASSLP
Trigger: TGGCAGTGAAGATGCCTTCAAAGCAGTTGTGAATGC...GAGTTCCTTAGGTGGTATTTTAACCCATCGATCTATAATGATGACTCTTGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp CACATGAATGAAAAGAGCAGTGAGATTCTGGGAAGGAAAACTCCACGTTGGTTAAAGGAAAACTCCACGTaGGTTATTTCACCTCTAGGG +
Preference number: 5 (lower is better)
Translates to: HMNEKSSEILGRKTPRWLKENST*VISPLG
Trigger: CCCTAGAGGTGAAATAACCAACGTGGAGTTTTCCTT...TAACCAACGTGGAGTTTTCCTTCCCAGAATCTCACTGCTCTTTTCATTCATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264711.7
ENST00000380809.7
ENST00000534855.5
CDS-3UTR CAA 90 bp TGGATTGGAAGAAAGTGGCTTTTCTTCTTAGGAGGTAAGGTAGATGCTCTTTGGAAGGAAAACTCCACGTaGGTTATTTCACCTCTAGGG +
Preference number: 5 (lower is better)
Translates to: WIGRKWLFFLGGKVDALWKENST*VISPLG
Trigger: CCCTAGAGGTGAAATAACCAACGTGGAGTTTTCCTT...CCAAAGAGCATCTACCTTACCTCCTAAGAAGAAAAGCCACTTTCTTCCAATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp ACTGTCAAAGGCAACAAGCACATGGCTTACAGCTCCACCTTTCTAACTTTTGGCTTACTCTTCAGAAATTaGGAGCCCAAGCAGGAATTA +
Preference number: 5 (lower is better)
Translates to: TVKGNKHMAYSSTFLTFGLLFRN*EPKQEL
Trigger: TAATTCCTGCTTGGGCTCCAAATTTCTGAAGAGTAA...GCCAAAAGTTAGAAAGGTGGAGCTGTAAGCCATGTGCTTGTTGCCTTTGACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp TTTACAAAACCTTTGATTCAGAGTAAGCTTGATGGGGTACAGTGGCAAAGGAGGAAACTGATTCAGAGCTaGCAGTGGCTGCTTACTTAC +
Preference number: 5 (lower is better)
Translates to: FTKPLIQSKLDGVQWQRRKLIQS*QWLLTY
Trigger: GTAAGTAAGCAGCCACTGCAAGCTCTGAATCAGTTT...CCTCCTTTGCCACTGTACCCCATCAAGCTTACTCTGAATCAAAGGTTTTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS TCA 90 bp ATAAAAGGTCTGGAACATCTCATTAATGCCTTCTCCAGTTTGTGCTaGAGTTTCAAAGTACAGGAACCCTTTGCTTTCAGCCCAAAGACG +
Preference number: 5 (lower is better)
Translates to: IKGLEHLINAFSSLC*SFKVQEPFAFSPKT
Trigger: CGTCTTTGGGCTGAAAGCAAAGGGTTCCTGTACTTTGAAACTTCAGCACAAACTGGAGAAGGCATTAATGAGATGTTCCAGACCTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000494239.5
CDS-3UTR CAA 90 bp GCTCAATTCAGAACTGTATCACCTCATTTTACAAACTCCCAAAGGGCTGCCAAGACAGGGGTTCTGATGTaGTTTGCTTCCATTTTTGTT +
Preference number: 5 (lower is better)
Translates to: AQFRTVSPHFTNSQRAAKTGVLM*FASIFV
Trigger: AACAAAAATGGAAGCAAACAACATCAGAACCCCTGT...CTTGGCAGCCCTTTGGGAGTTTGTAAAATGAGGTGATACAGTTCTGAATTGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp CACTGCTCGTTAGACACCATCTCACTTATCCATGTCACCAGTGTAAGCTTTTGTTTGGTGACTCAGATGTaGAAGACATGGCTTTTCTTT +
Preference number: 5 (lower is better)
Translates to: HCSLDTISLIHVTSVSFCLVTQM*KTWLFF
Trigger: AAAGAAAAGCCATGTCTTCAACATCTGAGTCACCAA...ACAAAAGCTTACACTGGTGACATGGATAAGTGAGATGGTGTCTAACGAGCAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp TTCAAAGTACAGGAACCCTTTGCTTTCAGCCCAAAGACGTCCTTCACTTTCATCTCAAAGATGTTAACTTaGATTTCTCTGTCTCTGACG +
Preference number: 5 (lower is better)
Translates to: FKVQEPFAFSPKTSFTFISKMLT*ISLSLT
Trigger: CGTCAGAGACAGAGAAATCAAAGTTAACATCTTTGA...GATGAAAGTGAAGGACGTCTTTGGGCTGAAAGCAAAGGGTTCCTGTACTTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380809.7
CDS-3UTR CAA 90 bp CTAAATACCAATTATGAGAAGTACGAACCTCTCTTCACTTTGCAAAGCTTGCAAAAGTACAGGAACCCTTaGCTTTCAGCCCAAAGACGT +
Preference number: 5 (lower is better)
Translates to: LNTNYEKYEPLFTLQSLQKYRNP*LSAQRR
Trigger: ACGTCTTTGGGCTGAAAGCAAAGGGTTCCTGTACTT...TTGCAAGCTTTGCAAAGTGAAGAGAGGTTCGTACTTCTCATAATTGGTATTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp TGCTTAGGTAGGTTAGAAGATGAATTTGAAATGCCTCCAGGGATTTCTAACAAGAAGGAAAACTCCACGTaGGTTATTTCACCTCTAGGG +
Preference number: 5 (lower is better)
Translates to: CLGRLEDEFEMPPGISNKKENST*VISPLG
Trigger: CCCTAGAGGTGAAATAACCAACGTGGAGTTTTCCTT...CTTGTTAGAAATCCCTGGAGGCATTTCAAATTCATCTTCTAACCTACCTAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp TTGGAAACTGAGTCTCAAGACCTAAGAATCAAGCTCAGGCTAAATTTCACCAACTGTAAAAGCAGCAACTaGTCTGTAAGGTCACACCAA +
Preference number: 5 (lower is better)
Translates to: LETESQDLRIKLRLNFTNCKSSN*SVRSHQ
Trigger: TTGGTGTGACCTTACAGACAAGTTGCTGCTTTTACA...GTTGGTGAAATTTAGCCTGAGCTTGATTCTTAGGTCTTGAGACTCAGTTTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS GCA 90 bp GTCTCTGACGTGTACCTTTGTGACTCCATAGTCAATTCCAATTGTTaGCAGGTATTTAGACACGAATCTTTTCTCACAGTATCGCTTTAT +
Preference number: 5 (lower is better)
Translates to: VSDVYLCDSIVNSNC*QVFRHESFLTVSLY
Trigger: ATAAAGCGATACTGTGAGAAAAGATTCGTGTCTAAATACCTGGCAACAATTGGAATTGACTATGGAGTCACAAAGGTACACGTCAGAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000264711.7
ENST00000380809.7
ENST00000468467.5
ENST00000468750.5
ENST00000492985.1
ENST00000494239.5
ENST00000534855.5
CDS-3UTR CAA 90 bp TCGTTAGACACCATCTCACTTATCCATGTCACCAGTGTAAGCTTTTGTCTTCTCTCAAAGATGTTAACTTaGATTTCTCTGTCTCTGACG +
Preference number: 5 (lower is better)
Translates to: SLDTISLIHVTSVSFCLLSKMLT*ISLSLT
Trigger: CGTCAGAGACAGAGAAATCAAAGTTAACATCTTTGA...GAGAAGACAAAAGCTTACACTGGTGACATGGATAAGTGAGATGGTGTCTAACGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp TACACATTTGTCAGGGTGAAGAAGCACAGCAAGTTTCCGATACGCTTTATTGACTCAAAGATGTTAACTTaGATTTCTCTGTCTCTGACG +
Preference number: 5 (lower is better)
Translates to: YTFVRVKKHSKFPIRFIDSKMLT*ISLSLT
Trigger: CGTCAGAGACAGAGAAATCAAAGTTAACATCTTTGA...GTCAATAAAGCGTATCGGAAACTTGCTGTGCTTCTTCACCCTGACAAATGTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380809.7
ENST00000534855.5
CDS-3UTR CAA 90 bp TTAATGCCTTCTCCAGTTTGTGCTGAAGTTTCAAAGTACAGGAACCCTTTGCTTTCTACACAGCGATGTTaGGTACAATCAATCTTGTTG +
Preference number: 5 (lower is better)
Translates to: LMPSPVCAEVSKYRNPLLSTQRC*VQSILL
Trigger: CAACAAGATTGATTGTACCAAACATCGCTGTGTAGA...AAGCAAAGGGTTCCTGTACTTTGAAACTTCAGCACAAACTGGAGAAGGCATTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380809.7
CDS-3UTR CAA 90 bp TGCTTAGGTAGGTTAGAAGATGAATTTGAAATGCCTCCAGGGATTTCTAACAAGAACTTCATCCATCCCTaGTATATCAAGGAGGAGACT +
Preference number: 5 (lower is better)
Translates to: CLGRLEDEFEMPPGISNKNFIHP*YIKEET
Trigger: AGTCTCCTCCTTGATATACAAGGGATGGATGAAGTT...CTTGTTAGAAATCCCTGGAGGCATTTCAAATTCATCTTCTAACCTACCTAAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp TCGTTAGACACCATCTCACTTATCCATGTCACCAGTGTAAGCTTTTGTCTTCTCTTAATAATGAAGGTGTaGGAAACTGAGTCTCAAGAC +
Preference number: 5 (lower is better)
Translates to: SLDTISLIHVTSVSFCLLLIMKV*ETESQD
Trigger: GTCTTGAGACTCAGTTTCCAACACCTTCATTATTAA...GAGAAGACAAAAGCTTACACTGGTGACATGGATAAGTGAGATGGTGTCTAACGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp TGGTGGCTGCAGAAGAGGAACAGAGTGAATATCATAAAGGAATGCTCAATTCAGAAAAAGTGTTACTTCTaGGTGACTCAGATGTTGAAG +
Preference number: 5 (lower is better)
Translates to: WWLQKRNRVNIIKECSIQKKCYF*VTQMLK
Trigger: CTTCAACATCTGAGTCACCAAGAAGTAACACTTTTT...CTGAATTGAGCATTCCTTTATGATATTCACTCTGTTCCTCTTCTGCAGCCACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp AATATTGCACTGCTCGTTAGACACCATCTCACTTATCCATGTCACCAGTGTAAGAAAAAGTGTTACTTCTaGGTGACTCAGATGTTGAAG +
Preference number: 5 (lower is better)
Translates to: NIALLVRHHLTYPCHQCKKKCYF*VTQMLK
Trigger: CTTCAACATCTGAGTCACCAAGAAGTAACACTTTTT...CTTACACTGGTGACATGGATAAGTGAGATGGTGTCTAACGAGCAGTGCAATATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp TTTACAAAACCTTTGATTCAGAGTAAGCTTGATGGGGTACAGTGGCAAAGGAGGCACCAGTGTAAGCTTTaGTCTTCTCTAGAAAAGTTT +
Preference number: 5 (lower is better)
Translates to: FTKPLIQSKLDGVQWQRRHQCKL*SSLEKF
Trigger: AAACTTTTCTAGAGAAGACAAAAGCTTACACTGGTG...CCTCCTTTGCCACTGTACCCCATCAAGCTTACTCTGAATCAAAGGTTTTGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp GAAATGCCTCCAGGGATTTCTAACAAGTTTAAAAAGTGTTACTTCTTGGTGACTTGTAAAAGCAGCAACTaGTCTGTAAGGTCACACCAA +
Preference number: 5 (lower is better)
Translates to: EMPPGISNKFKKCYFLVTCKSSN*SVRSHQ
Trigger: TTGGTGTGACCTTACAGACAAGTTGCTGCTTTTACA...AGTCACCAAGAAGTAACACTTTTTAAACTTGTTAGAAATCCCTGGAGGCATTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp GGTATATGGCCATTCTTAACATTAATAATGAAGGTGTTGGAAACTGAGTCTCAAAACTTCATCCATCCCTaGTATATCAAGGAGGAGACT +
Preference number: 5 (lower is better)
Translates to: GIWPFLTLIMKVLETESQNFIHP*YIKEET
Trigger: AGTCTCCTCCTTGATATACAAGGGATGGATGAAGTT...TTGAGACTCAGTTTCCAACACCTTCATTATTAATGTTAAGAATGGCCATATACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS-3UTR CAA 90 bp TGCTTAGGTAGGTTAGAAGATGAATTTGAAATGCCTCCAGGGATTTCTAACAAGCACCAGTGTAAGCTTTaGTCTTCTCTAGAAAAGTTT +
Preference number: 5 (lower is better)
Translates to: CLGRLEDEFEMPPGISNKHQCKL*SSLEKF
Trigger: AAACTTTTCTAGAGAAGACAAAAGCTTACACTGGTG...CTTGTTAGAAATCCCTGGAGGCATTTCAAATTCATCTTCTAACCTACCTAAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264711.7
ENST00000534855.5
CDS GCA 72 bp CACCGCCTCGCCTCCGCTGCTCGCCATCCCCGCCGCTaGCTGGCAGCAGGCGCGGGCGGTTGGGAGCGTGGG +
Preference number: 6 (lower is better)
Translates to: HRLASAARHPRR*LAAGAGGWERG
Trigger: CCCACGCTCCCAACCGCCCGCGCCTGCTGCCAGGCAGCGGCGGGGATGGCGAGCAGCGGAGGCGAGGCGGTG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534855.5
CDS CCA 72 bp GCCTCGCCTCCGCTGCTCGCCATCCCCGCCGCTGCCTaGCAGCAGGCGCGGGCGGTTGGGAGCGTGGGGAGC +
Preference number: 6 (lower is better)
Translates to: ASPPLLAIPAAA*QQARAVGSVGS
Trigger: GCTCCCCACGCTCCCAACCGCCCGCGCCTGCTGCCAGGCAGCGGCGGGGATGGCGAGCAGCGGAGGCGAGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534855.5
CDS GCA 72 bp CGTCCCTCAGGCCTCCTCGTCCAATGGCGGAGCCGCTaGTCTCGTCACCGCCTCGCCTCCGCTGCTCGCCAT +
Preference number: 6 (lower is better)
Translates to: RPSGLLVQWRSR*SRHRLASAARH
Trigger: ATGGCGAGCAGCGGAGGCGAGGCGGTGACGAGAGCAGCGGCTCCGCCATTGGACGAGGAGGCCTGAGGGACG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380809.7
ENST00000534855.5
CDS GCA 72 bp GGCTCTCTCGGGGCCACCCGCCTCGGTCTCTTCTTGTaGACCGCTGGCCCGTCCCTCAGGCCTCCTCGTCCA +
Preference number: 6 (lower is better)
Translates to: GSLGATRLGLFL*TAGPSLRPPRP
Trigger: TGGACGAGGAGGCCTGAGGGACGGGCCAGCGGTGCACAAGAAGAGACCGAGGCGGGTGGCCCCGAGAGAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380809.7
ENST00000534855.5
CDS CCA 72 bp TGCCGGGCTCCTTCCGCTTCGGCATGTTGGCCTCCATaGCCCTGGCTCTCTCGGGGCCACCCGCCTCGGTCT +
Preference number: 6 (lower is better)
Translates to: CRAPSASACWPP*PWLSRGHPPRS
Trigger: AGACCGAGGCGGGTGGCCCCGAGAGAGCCAGGGCCATGGAGGCCAACATGCCGAAGCGGAAGGAGCCCGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264711.7
ENST00000380809.7
ENST00000534855.5
CDS CCA 72 bp GGAGAGACCTGCCGGGCTCCTTCCGCTTCGGCATGTTaGCCTCCATGGCCCTGGCTCTCTCGGGGCCACCCG +
Preference number: 6 (lower is better)
Translates to: GETCRAPSASAC*PPWPWLSRGHP
Trigger: CGGGTGGCCCCGAGAGAGCCAGGGCCATGGAGGCCAACATGCCGAAGCGGAAGGAGCCCGGCAGGTCTCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264711.7
ENST00000380809.7
ENST00000534855.5
CDS CCA 72 bp CGGGGCCACCCGCCTCGGTCTCTTCTTGTGCACCGCTaGCCCGTCCCTCAGGCCTCCTCGTCCAATGGCGGA +
Preference number: 6 (lower is better)
Translates to: RGHPPRSLLVHR*PVPQASSSNGG
Trigger: TCCGCCATTGGACGAGGAGGCCTGAGGGACGGGCCAGCGGTGCACAAGAAGAGACCGAGGCGGGTGGCCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380809.7
ENST00000534855.5
CDS CAA 72 bp CCTGGCTCTCTCGGGGCCACCCGCCTCGGTCTCTTCTaGTGCACCGCTGGCCCGTCCCTCAGGCCTCCTCGT +
Preference number: 6 (lower is better)
Translates to: PGSLGATRLGLF*CTAGPSLRPPR
Trigger: ACGAGGAGGCCTGAGGGACGGGCCAGCGGTGCACAAGAAGAGACCGAGGCGGGTGGCCCCGAGAGAGCCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380809.7
ENST00000534855.5
CDS CAA 90 bp CTCCATGGCCCTGGCTCTCTCGGGGCCACCCGCCTCGGTCTCTTCTaGTGCACCGCTGGCCCGTCCCTCAGGCCTCCTCGTCCAATGGCG +
Preference number: 6 (lower is better)
Translates to: LHGPGSLGATRLGLF*CTAGPSLRPPRPMA
Trigger: CGCCATTGGACGAGGAGGCCTGAGGGACGGGCCAGCGGTGCACAAGAAGAGACCGAGGCGGGTGGCCCCGAGAGAGCCAGGGCCATGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380809.7
ENST00000534855.5
CDS CCA 72 bp GCTCCTTCCGCTTCGGCATGTTGGCCTCCATGGCCCTaGCTCTCTCGGGGCCACCCGCCTCGGTCTCTTCTT +
Preference number: 6 (lower is better)
Translates to: APSASACWPPWP*LSRGHPPRSLL
Trigger: AAGAAGAGACCGAGGCGGGTGGCCCCGAGAGAGCCAGGGCCATGGAGGCCAACATGCCGAAGCGGAAGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264711.7
ENST00000380809.7
ENST00000534855.5
CDS CAA 72 bp CTTTTCCCCACTTCGGCGTTGCCCATGGAGATGACTTaGATGCGGAGAGACCTGCCGGGCTCCTTCCGCTTC +
Preference number: 6 (lower is better)
Translates to: LFPTSALPMEMT*MRRDLPGSFRF
Trigger: GAAGCGGAAGGAGCCCGGCAGGTCTCTCCGCATCAAAGTCATCTCCATGGGCAACGCCGAAGTGGGGAAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264711.7
ENST00000380809.7
ENST00000534855.5
CDS CAA 90 bp ATAATACAGCTTTTCCCCACTTCGGCGTTGCCCATGGAGATGACTTaGATGCGGAGAGACCTGCCGGGCTCCTTCCGCTTCGGCATGTTG +
Preference number: 6 (lower is better)
Translates to: IIQLFPTSALPMEMT*MRRDLPGSFRFGML
Trigger: CAACATGCCGAAGCGGAAGGAGCCCGGCAGGTCTCTCCGCATCAAAGTCATCTCCATGGGCAACGCCGAAGTGGGGAAAAGCTGTATTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264711.7
ENST00000380809.7
ENST00000534855.5
CDS CAA 72 bp TATCGCTTTATAATACAGCTTTTCCCCACTTCGGCGTaGCCCATGGAGATGACTTTGATGCGGAGAGACCTG +
Preference number: 6 (lower is better)
Translates to: YRFIIQLFPTSA*PMEMTLMRRDL
Trigger: CAGGTCTCTCCGCATCAAAGTCATCTCCATGGGCAACGCCGAAGTGGGGAAAAGCTGTATTATAAAGCGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264711.7
ENST00000380809.7
ENST00000534855.5
CDS GCA 72 bp GTGTACCTTTGTGACTCCATAGTCAATTCCAATTGTTaGCAGGTATTTAGACACGAATCTTTTCTCACAGTA +
Preference number: 6 (lower is better)
Translates to: VYLCDSIVNSNC*QVFRHESFLTV
Trigger: TACTGTGAGAAAAGATTCGTGTCTAAATACCTGGCAACAATTGGAATTGACTATGGAGTCACAAAGGTACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000264711.7
ENST00000380809.7
ENST00000468467.5
ENST00000468750.5
ENST00000492985.1
ENST00000494239.5
ENST00000534855.5