Pregenerated sensors for DNAJC2 (Homo sapiens)
Ensembl gene IDs: ENSG00000105821Ensembl transcript IDs: ENST00000249270.11, ENST00000379257.7, ENST00000379263.8, ENST00000412522.1, ENST00000426036.6, ENST00000454277.5, ENST00000475090.1, ENST00000492497.1
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GCTAGTATTGAACTCCAGCCTCAAGTAATCTGCCTGCCTTGGTCTTCCAAAGTGTGTGGGTGGATCACCTaGGGTCGGGAGTTCGAGACC | + |
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Preference number: 2 (lower is better) Translates to: ASIELQPQVICLPWSSKVCGWIT*GREFET Trigger: GGTCTCGAACTCCCGACCTCAGGTGATCCACCCACA...CACTTTGGAAGACCAAGGCAGGCAGATTACTTGAGGCTGGAGTTCAATACTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| 3UTR-3UTR TCA 90 bp | GCTAGTATTGAACTCCAGCCTCAAGTAATCTGCCTGCCTTGGTCTTCCAAAGTGCTTCTTGACAGGCCCTaGCTCCCTGCTCCTTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: ASIELQPQVICLPWSSKVLLDRP*LPAPFP Trigger: TGGAAAAGGAGCAGGGAGTCAGGGCCTGTCAAGAAG...CACTTTGGAAGACCAAGGCAGGCAGATTACTTGAGGCTGGAGTTCAATACTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| 3UTR-3UTR CCA 90 bp | GCTAGTATTGAACTCCAGCCTCAAGTAATCTGCCTGCCTTGGTCTTCCAAAGTGAAGGCATATGAAGACTaGGGTCCCAACATTACCCTC | + |
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Preference number: 2 (lower is better) Translates to: ASIELQPQVICLPWSSKVKAYED*GPNITL Trigger: GAGGGTAATGTTGGGACCCCAGTCTTCATATGCCTT...CACTTTGGAAGACCAAGGCAGGCAGATTACTTGAGGCTGGAGTTCAATACTAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| 3UTR-3UTR CCA 90 bp | GCTAGTATTGAACTCCAGCCTCAAGTAATCTGCCTGCCTTGGTCTTCCAAAGTGTGCTCCTTTTCCATGTaGCCACAATCTTACCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: ASIELQPQVICLPWSSKVCSFSM*PQSYPL Trigger: GAGAGGGTAAGATTGTGGCCACATGGAAAAGGAGCA...CACTTTGGAAGACCAAGGCAGGCAGATTACTTGAGGCTGGAGTTCAATACTAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| 3UTR CAA 90 bp | GAGCCACCACGCCCGGCCAATGCTATTCTTTCGTATAGTAAAACTTaGCAAACACTTGTACGTGGCAAATGGACTTTTCTGGCATTTATT | + |
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Preference number: 2 (lower is better) Translates to: EPPRPANAILSYSKT*QTLVRGKWTFLAFI Trigger: AATAAATGCCAGAAAAGTCCATTTGCCACGTACAAGTGTTTGCAAAGTTTTACTATACGAAAGAATAGCATTGGCCGGGCGTGGTGGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| 3UTR-3UTR GCA 90 bp | CCGGCCAATGCTATTCTTTCGTATAGTAAAACTTTGCAAACACTTGTACGTGGCGCAGTATCCACTAAGTaGAGCTGCTATACTTCTAAA | + |
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Preference number: 2 (lower is better) Translates to: PANAILSYSKTLQTLVRGAVSTK*SCYTSK Trigger: TTTAGAAGTATAGCAGCTGCACTTAGTGGATACTGC...GCCACGTACAAGTGTTTGCAAAGTTTTACTATACGAAAGAATAGCATTGGCCGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| 3UTR CAA 90 bp | GCCCGGCCAATGCTATTCTTTCGTATAGTAAAACTTTGCAAACACTaGTACGTGGCAAATGGACTTTTCTGGCATTTATTTATACTGGAA | + |
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Preference number: 2 (lower is better) Translates to: ARPMLFFRIVKLCKH*YVANGLFWHLFILE Trigger: TTCCAGTATAAATAAATGCCAGAAAAGTCCATTTGCCACGTACAAGTGTTTGCAAAGTTTTACTATACGAAAGAATAGCATTGGCCGGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| 3UTR-3UTR CCA 90 bp | TATAGTAAAACTTTGCAAACACTTGTACGTGGCAAATGGACTTTTCTGGCATTTATCCATTCTCTAGAGTaGAGGGCAGAACATTCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: YSKTLQTLVRGKWTFLAFIHSLE*RAEHSP Trigger: AGGAGAATGTTCTGCCCTCCACTCTAGAGAATGGAT...AAATGCCAGAAAAGTCCATTTGCCACGTACAAGTGTTTGCAAAGTTTTACTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| 3UTR-3UTR CCA 90 bp | TATAGTAAAACTTTGCAAACACTTGTACGTGGCAAATGGACTTTTCTGGCATTTTCAGACAACTTTTCTTaGACAGAAGACAGGGTGATA | + |
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Preference number: 2 (lower is better) Translates to: YSKTLQTLVRGKWTFLAFSDNFS*TEDRVI Trigger: TATCACCCTGTCTTCTGTCCAAGAAAAGTTGTCTGA...AAATGCCAGAAAAGTCCATTTGCCACGTACAAGTGTTTGCAAAGTTTTACTATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| 3UTR-3UTR CCA 90 bp | CAACATTACCCTCTCCCATGCCAAATTATAACCTTGTCAATGAAAACAACAATATTAAAAGCTTGCCATTaGAGGAGTATTTTGTATCCA | + |
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Preference number: 2 (lower is better) Translates to: QHYPLPCQIITLSMKTTILKACH*RSILYP Trigger: TGGATACAAAATACTCCTCCAATGGCAAGCTTTTAA...TATTGTTGTTTTCATTGACAAGGTTATAATTTGGCATGGGAGAGGGTAATGTTG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| 3UTR-3UTR CAA 90 bp | CACGCCCGGCCAATGCTATTCTTTCGTATAGTAAAACTTTGCAAACACTTGTACGCATTACCATATGCTTaGTCTAGACTCATGCCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: HARPMLFFRIVKLCKHLYALPYA*SRLMPA Trigger: GGCTGGCATGAGTCTAGACAAAGCATATGGTAATGC...GTACAAGTGTTTGCAAAGTTTTACTATACGAAAGAATAGCATTGGCCGGGCGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| 3UTR-3UTR CAA 90 bp | CCGGCCAATGCTATTCTTTCGTATAGTAAAACTTTGCAAACACTTGTACGTGGCCATTGGAGGAGTATTTaGTATCCACACACACACACC | + |
|
Preference number: 3 (lower is better) Translates to: PANAILSYSKTLQTLVRGHWRSI*YPHTHT Trigger: GGTGTGTGTGTGTGGATACAAAATACTCCTCCAATG...GCCACGTACAAGTGTTTGCAAAGTTTTACTATACGAAAGAATAGCATTGGCCGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| 3UTR-3UTR CAA 90 bp | CACGCCCGGCCAATGCTATTCTTTCGTATAGTAAAACTTTGCAAACACTTGTACATCAGACAACTTTTCTaGGACAGAAGACAGGGTGAT | + |
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Preference number: 3 (lower is better) Translates to: HARPMLFFRIVKLCKHLYIRQLF*DRRQGD Trigger: ATCACCCTGTCTTCTGTCCAAGAAAAGTTGTCTGAT...GTACAAGTGTTTGCAAAGTTTTACTATACGAAAGAATAGCATTGGCCGGGCGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| 3UTR TCA 72 bp | GAGTGGAGGGCAGAACATTCTCCTAAGATAGAAAACTaGTCACCTTCACCTCTTACCTCTTTCACTAAACTT | + |
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Preference number: 3 (lower is better) Translates to: EWRAEHSPKIEN*SPSPLTSFTKL Trigger: AAGTTTAGTGAAAGAGGTAAGAGGTGAAGGTGATCAGTTTTCTATCTTAGGAGAATGTTCTGCCCTCCACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| 3UTR-3UTR CAA 90 bp | CCGGCCAATGCTATTCTTTCGTATAGTAAAACTTTGCAAACACTTGTACGTGGCGTAATGGGGACGATTTaGAGTTCATCTACTATGCTA | + |
|
Preference number: 3 (lower is better) Translates to: PANAILSYSKTLQTLVRGVMGTI*SSSTML Trigger: TAGCATAGTAGATGAACTCAAAATCGTCCCCATTAC...GCCACGTACAAGTGTTTGCAAAGTTTTACTATACGAAAGAATAGCATTGGCCGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| 3UTR-3UTR CAA 90 bp | TATAGTAAAACTTTGCAAACACTTGTACGTGGCAAATGGACTTTTCTGGCATTTTTTAAAAGCTTGCCATaGGAGGAGTATTTTGTATCC | + |
|
Preference number: 3 (lower is better) Translates to: YSKTLQTLVRGKWTFLAFFKSLP*EEYFVS Trigger: GGATACAAAATACTCCTCCAATGGCAAGCTTTTAAA...AAATGCCAGAAAAGTCCATTTGCCACGTACAAGTGTTTGCAAAGTTTTACTATA 36% GC, longest homopolymer 6 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| 3UTR TCA 72 bp | AAACATCAGACAACTTTTCTTGGACAGAAGACAGGGTaGTATCTACAAAGGTGTGACCTAAGATTACAAAAT | + |
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Preference number: 3 (lower is better) Translates to: KHQTTFLGQKTG*YLQRCDLRLQN Trigger: ATTTTGTAATCTTAGGTCACACCTTTGTAGATATCACCCTGTCTTCTGTCCAAGAAAAGTTGTCTGATGTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| CDS-3UTR CCA 90 bp | CCGGCCAATGCTATTCTTTCGTATAGTAAAACTTTGCAAACACTTGTACGTGGCCCGGGTCTAGCCCGGTaGGCGCAGCGGCTCACGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PANAILSYSKTLQTLVRGPGLAR*AQRLTS Trigger: GGACGTGAGCCGCTGCGCCCACCGGGCTAGACCCGG...GCCACGTACAAGTGTTTGCAAAGTTTTACTATACGAAAGAATAGCATTGGCCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| CDS-3UTR CCA 90 bp | GCTAGTATTGAACTCCAGCCTCAAGTAATCTGCCTGCCTTGGTCTTCCAAAGTGGCCGTCCGCGGCGCTTaGCAGAAGCAGCATGATGGC | + |
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Preference number: 4 (lower is better) Translates to: ASIELQPQVICLPWSSKVAVRGA*QKQHDG Trigger: GCCATCATGCTGCTTCTGCCAAGCGCCGCGGACGGC...CACTTTGGAAGACCAAGGCAGGCAGATTACTTGAGGCTGGAGTTCAATACTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| CDS-3UTR GCA 90 bp | GCTAGTATTGAACTCCAGCCTCAAGTAATCTGCCTGCCTTGGTCTTCCAAAGTGGCGACCTCGGCTCACTaGAACCTCTGCCTCCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ASIELQPQVICLPWSSKVATSAH*NLCLLG Trigger: ACCCAGGAGGCAGAGGTTGCAGTGAGCCGAGGTCGC...CACTTTGGAAGACCAAGGCAGGCAGATTACTTGAGGCTGGAGTTCAATACTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| CDS-3UTR TCA 90 bp | GGATGGTGTTTTATAAGGCATATGAAGACTGGGGTCCCAACATTACCCTCTCCCAGGCGGAGGTTGTGGTaGGCCAAGATGGTGCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: GWCFIRHMKTGVPTLPSPRRRLW*AKMVPL Trigger: CAATGGCACCATCTTGGCTCACCACAACCTCCGCCT...GGGAGAGGGTAATGTTGGGACCCCAGTCTTCATATGCCTTATAAAACACCATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| CDS-3UTR CCA 90 bp | GCTAGTATTGAACTCCAGCCTCAAGTAATCTGCCTGCCTTGGTCTTCCAAAGTGCCAGGAACCGGCGCATaGAGACGACCAGTAAGCACT | + |
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Preference number: 4 (lower is better) Translates to: ASIELQPQVICLPWSSKVPGTGA*RRPVST Trigger: AGTGCTTACTGGTCGTCTCCATGCGCCGGTTCCTGG...CACTTTGGAAGACCAAGGCAGGCAGATTACTTGAGGCTGGAGTTCAATACTAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| CDS-3UTR CCA 90 bp | GGATGGTGTTTTATAAGGCATATGAAGACTGGGGTCCCAACATTACCCTCTCCCGGATCTTTCGTGGTGTaGAGGCCAGTCTCACACCCT | + |
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Preference number: 4 (lower is better) Translates to: GWCFIRHMKTGVPTLPSPGSFVV*RPVSHP Trigger: AGGGTGTGAGACTGGCCTCCACACCACGAAAGATCC...GGGAGAGGGTAATGTTGGGACCCCAGTCTTCATATGCCTTATAAAACACCATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| CDS-3UTR GCA 90 bp | GCTAGTATTGAACTCCAGCCTCAAGTAATCTGCCTGCCTTGGTCTTCCAAAGTGTTCAAGCGATTCTCATaGCTCAGCCTCCCAAGTAGT | + |
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Preference number: 4 (lower is better) Translates to: ASIELQPQVICLPWSSKVFKRFS*LSLPSS Trigger: ACTACTTGGGAGGCTGAGGCATGAGAATCGCTTGAA...CACTTTGGAAGACCAAGGCAGGCAGATTACTTGAGGCTGGAGTTCAATACTAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| CDS-3UTR GCA 90 bp | GGATGGTGTTTTATAAGGCATATGAAGACTGGGGTCCCAACATTACCCTCTCCCTTGCTCAGGTTGGACTaGAGTGGTACAATCTTCGCT | + |
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Preference number: 4 (lower is better) Translates to: GWCFIRHMKTGVPTLPSPLLRLD*SGTIFA Trigger: AGCGAAGATTGTACCACTGCAGTCCAACCTGAGCAA...GGGAGAGGGTAATGTTGGGACCCCAGTCTTCATATGCCTTATAAAACACCATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| CDS-3UTR CCA 90 bp | CCGGCCAATGCTATTCTTTCGTATAGTAAAACTTTGCAAACACTTGTACGTGGCGGGATGGATCTTTCGTaGTGTGGAGGCCAGTCTCAC | + |
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Preference number: 4 (lower is better) Translates to: PANAILSYSKTLQTLVRGGMDLS*CGGQSH Trigger: GTGAGACTGGCCTCCACACCACGAAAGATCCATCCC...GCCACGTACAAGTGTTTGCAAAGTTTTACTATACGAAAGAATAGCATTGGCCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| CDS-3UTR CCA 90 bp | CACGCCCGGCCAATGCTATTCTTTCGTATAGTAAAACTTTGCAAACACTTGTACCCACGTTGGCCAGGCTaGTCTCATATTCCTCACCTC | + |
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Preference number: 4 (lower is better) Translates to: HARPMLFFRIVKLCKHLYPRWPG*SHIPHL Trigger: GAGGTGAGGAATATGAGACCAGCCTGGCCAACGTGG...GTACAAGTGTTTGCAAAGTTTTACTATACGAAAGAATAGCATTGGCCGGGCGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| CDS-3UTR CCA 90 bp | CACGCCCGGCCAATGCTATTCTTTCGTATAGTAAAACTTTGCAAACACTTGTACAGCCTCCCAAGTAGTTaGGCTTACAGGCATGCGCCA | + |
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Preference number: 4 (lower is better) Translates to: HARPMLFFRIVKLCKHLYSLPSS*AYRHAP Trigger: TGGCGCATGCCTGTAAGCCCAACTACTTGGGAGGCT...GTACAAGTGTTTGCAAAGTTTTACTATACGAAAGAATAGCATTGGCCGGGCGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| CDS-3UTR CCA 90 bp | GCTAGTATTGAACTCCAGCCTCAAGTAATCTGCCTGCCTTGGTCTTCCAAAGTGCTCTGTTGCTCAGGTTaGACTGCAGTGGTACAATCT | + |
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Preference number: 4 (lower is better) Translates to: ASIELQPQVICLPWSSKVLCCSG*TAVVQS Trigger: AGATTGTACCACTGCAGTCCAACCTGAGCAACAGAG...CACTTTGGAAGACCAAGGCAGGCAGATTACTTGAGGCTGGAGTTCAATACTAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| CDS-3UTR TCA 90 bp | CACGCCCGGCCAATGCTATTCTTTCGTATAGTAAAACTTTGCAAACACTTGTACAATACTTCCTCTTCTTaGCAGGCCCTGACTCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: HARPMLFFRIVKLCKHLYNTSSS*QALTPC Trigger: GCAGGGAGTCAGGGCCTGTCAAGAAGAGGAAGTATT...GTACAAGTGTTTGCAAAGTTTTACTATACGAAAGAATAGCATTGGCCGGGCGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| CDS-3UTR CCA 90 bp | GGATGGTGTTTTATAAGGCATATGAAGACTGGGGTCCCAACATTACCCTCTCCCATCCATTCTCTAGAGTaGAGGGCAGAACATTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: GWCFIRHMKTGVPTLPSPIHSLE*RAEHSP Trigger: AGGAGAATGTTCTGCCCTCCACTCTAGAGAATGGAT...GGGAGAGGGTAATGTTGGGACCCCAGTCTTCATATGCCTTATAAAACACCATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| CDS-3UTR TCA 90 bp | CAACATTACCCTCTCCCATGCCAAATTATAACCTTGTCAATGAAAACAACAATATGTGGGTGGATCACCTaGGGTCGGGAGTTCGAGACC | + |
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Preference number: 4 (lower is better) Translates to: QHYPLPCQIITLSMKTTICGWIT*GREFET Trigger: GGTCTCGAACTCCCGACCTCAGGTGATCCACCCACA...TATTGTTGTTTTCATTGACAAGGTTATAATTTGGCATGGGAGAGGGTAATGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| CDS-3UTR CCA 90 bp | CCGGCCAATGCTATTCTTTCGTATAGTAAAACTTTGCAAACACTTGTACGTGGCGGTGTTTCTCCACGTTaGCCAGGCTGGTCTCATATT | + |
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Preference number: 4 (lower is better) Translates to: PANAILSYSKTLQTLVRGGVSPR*PGWSHI Trigger: AATATGAGACCAGCCTGGCCAACGTGGAGAAACACC...GCCACGTACAAGTGTTTGCAAAGTTTTACTATACGAAAGAATAGCATTGGCCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| CDS-3UTR TCA 90 bp | CTTGCCATTGGAGGAGTATTTTGTATCCACACACACACACCCATCCTAATTTCTGGACAGAAGACAGGGTaGTATCTACAAAGGTGTGAC | + |
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Preference number: 4 (lower is better) Translates to: LAIGGVFCIHTHTPILISGQKTG*YLQRCD Trigger: GTCACACCTTTGTAGATATCACCCTGTCTTCTGTCC...AGAAATTAGGATGGGTGTGTGTGTGTGGATACAAAATACTCCTCCAATGGCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| CDS-3UTR CCA 90 bp | CTTGCCATTGGAGGAGTATTTTGTATCCACACACACACACCCATCCTAATTTCTGTAATCTGCCTGCCTTaGTCTTCCAAAGTGTTGGGA | + |
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Preference number: 4 (lower is better) Translates to: LAIGGVFCIHTHTPILISVICLP*SSKVLG Trigger: TCCCAACACTTTGGAAGACCAAGGCAGGCAGATTAC...AGAAATTAGGATGGGTGTGTGTGTGTGGATACAAAATACTCCTCCAATGGCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| CDS-3UTR TCA 90 bp | TATAGTAAAACTTTGCAAACACTTGTACGTGGCAAATGGACTTTTCTGGCATTTCTTCTTGACAGGCCCTaGCTCCCTGCTCCTTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: YSKTLQTLVRGKWTFLAFLLDRP*LPAPFP Trigger: TGGAAAAGGAGCAGGGAGTCAGGGCCTGTCAAGAAG...AAATGCCAGAAAAGTCCATTTGCCACGTACAAGTGTTTGCAAAGTTTTACTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| CDS-3UTR CCA 90 bp | CACGCCCGGCCAATGCTATTCTTTCGTATAGTAAAACTTTGCAAACACTTGTACGCAAACACTTGTACGTaGCAAATGGACTTTTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: HARPMLFFRIVKLCKHLYANTCT*QMDFSG Trigger: GCCAGAAAAGTCCATTTGCCACGTACAAGTGTTTGC...GTACAAGTGTTTGCAAAGTTTTACTATACGAAAGAATAGCATTGGCCGGGCGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| 3UTR CAA 72 bp | CGCCCGGCCAATGCTATTCTTTCGTATAGTAAAACTTaGCAAACACTTGTACGTGGCAAATGGACTTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: RPANAILSYSKT*QTLVRGKWTFL Trigger: CAGAAAAGTCCATTTGCCACGTACAAGTGTTTGCAAAGTTTTACTATACGAAAGAATAGCATTGGCCGGGCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| CDS-3UTR TCA 90 bp | CAACATTACCCTCTCCCATGCCAAATTATAACCTTGTCAATGAAAACAACAATACCCACAGGTTCAACTTaGCAGAGTGTAGAGGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: QHYPLPCQIITLSMKTTIPTGST*QSVEAE Trigger: CTCTGCCTCTACACTCTGTCAAGTTGAACCTGTGGG...TATTGTTGTTTTCATTGACAAGGTTATAATTTGGCATGGGAGAGGGTAATGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| CDS-3UTR TCA 90 bp | CCGGCCAATGCTATTCTTTCGTATAGTAAAACTTTGCAAACACTTGTACGTGGCCCTAAGATAGAAAACTaGTCACCTTCACCTCTTACC | + |
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Preference number: 4 (lower is better) Translates to: PANAILSYSKTLQTLVRGPKIEN*SPSPLT Trigger: GGTAAGAGGTGAAGGTGATCAGTTTTCTATCTTAGG...GCCACGTACAAGTGTTTGCAAAGTTTTACTATACGAAAGAATAGCATTGGCCGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| CDS-3UTR GCA 90 bp | CTTGCCATTGGAGGAGTATTTTGTATCCACACACACACACCCATCCTAATTTCTGCAGTATCCACTAAGTaGAGCTGCTATACTTCTAAA | + |
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Preference number: 4 (lower is better) Translates to: LAIGGVFCIHTHTPILISAVSTK*SCYTSK Trigger: TTTAGAAGTATAGCAGCTGCACTTAGTGGATACTGC...AGAAATTAGGATGGGTGTGTGTGTGTGGATACAAAATACTCCTCCAATGGCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| CDS-3UTR GCA 90 bp | CTTGCCATTGGAGGAGTATTTTGTATCCACACACACACACCCATCCTAATTTCTCTTTGTCTAGACTCATaGCAGCCTTTAAACAAATCC | + |
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Preference number: 4 (lower is better) Translates to: LAIGGVFCIHTHTPILISLCLDS*QPLNKS Trigger: GGATTTGTTTAAAGGCTGGCATGAGTCTAGACAAAG...AGAAATTAGGATGGGTGTGTGTGTGTGGATACAAAATACTCCTCCAATGGCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| CDS-3UTR CCA 90 bp | CAACATTACCCTCTCCCATGCCAAATTATAACCTTGTCAATGAAAACAACAATATGCTCCTTTTCCATGTaGCCACAATCTTACCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: QHYPLPCQIITLSMKTTICSFSM*PQSYPL Trigger: GAGAGGGTAAGATTGTGGCCACATGGAAAAGGAGCA...TATTGTTGTTTTCATTGACAAGGTTATAATTTGGCATGGGAGAGGGTAATGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| CDS-3UTR CCA 90 bp | CCGGCCAATGCTATTCTTTCGTATAGTAAAACTTTGCAAACACTTGTACGTGGCTTAAAAGCTTGCCATTaGAGGAGTATTTTGTATCCA | + |
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Preference number: 4 (lower is better) Translates to: PANAILSYSKTLQTLVRGLKACH*RSILYP Trigger: TGGATACAAAATACTCCTCCAATGGCAAGCTTTTAA...GCCACGTACAAGTGTTTGCAAAGTTTTACTATACGAAAGAATAGCATTGGCCGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| CDS-3UTR TCA 90 bp | TATAGTAAAACTTTGCAAACACTTGTACGTGGCAAATGGACTTTTCTGGCATTTTTATCCTCCAGTTCCTaGAAAGAGGCAGAAGCATTT | + |
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Preference number: 4 (lower is better) Translates to: YSKTLQTLVRGKWTFLAFLSSSS*KEAEAF Trigger: AAATGCTTCTGCCTCTTTTCAGGAACTGGAGGATAA...AAATGCCAGAAAAGTCCATTTGCCACGTACAAGTGTTTGCAAAGTTTTACTATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| CDS-3UTR GCA 90 bp | TATAGTAAAACTTTGCAAACACTTGTACGTGGCAAATGGACTTTTCTGGCATTTAGGTGTGACCCACTGTaGCTGGCTAAAAATCAATTT | + |
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Preference number: 4 (lower is better) Translates to: YSKTLQTLVRGKWTFLAFRCDPL*LAKNQF Trigger: AAATTGATTTTTAGCCAGGCACAGTGGGTCACACCT...AAATGCCAGAAAAGTCCATTTGCCACGTACAAGTGTTTGCAAAGTTTTACTATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| CDS-3UTR GCA 90 bp | CAACATTACCCTCTCCCATGCCAAATTATAACCTTGTCAATGAAAACAACAATACATTACCCTCTCCCATaGCAAATTATAACCTTGTCA | + |
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Preference number: 4 (lower is better) Translates to: QHYPLPCQIITLSMKTTIHYPLP*QIITLS Trigger: TGACAAGGTTATAATTTGGCATGGGAGAGGGTAATG...TATTGTTGTTTTCATTGACAAGGTTATAATTTGGCATGGGAGAGGGTAATGTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| CDS CCA 90 bp | GGTCAGAGCGTGGGTGATGGCGGTGCCCCGGCCGTCCGCGGCGCTTaGCAGAAGCAGCATGATGGCGCCGGGTCTAGCCCGGTGGGCGCA | + |
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Preference number: 5 (lower is better) Translates to: GQSVGDGGAPAVRGA*QKQHDGAGSSPVGA Trigger: TGCGCCCACCGGGCTAGACCCGGCGCCATCATGCTGCTTCTGCCAAGCGCCGCGGACGGCCGGGGCACCGCCATCACCCACGCTCTGACC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000249270.11 ENST00000379257.7 ENST00000379263.8 ENST00000412522.1 ENST00000454277.5 |
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| CDS CCA 90 bp | TCCGAGCCTCGCGCCTTGGCTCTAAGACGCCCAGGAACCGGCGCATaGAGACGACCAGTAAGCACTTCCGGGATGGATCTTTCGTGGTGT | + |
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Preference number: 5 (lower is better) Translates to: SEPRALALRRPGTGA*RRPVSTSGMDLSWC Trigger: ACACCACGAAAGATCCATCCCGGAAGTGCTTACTGGTCGTCTCCATGCGCCGGTTCCTGGGCGTCTTAGAGCCAAGGCGCGAGGCTCGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379257.7 ENST00000412522.1 |
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| CDS TCA 90 bp | TGGCTAGGGCTTTGTGGTCCTCAACTCTCAATGTCATTCTCACTCTaGCCCCATACTCCTCTCAGGCCAACCCAAAAAGAAGCACCAGCT | + |
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Preference number: 5 (lower is better) Translates to: WLGLCGPQLSMSFSL*PHTPLRPTQKEAPA Trigger: AGCTGGTGCTTCTTTTTGGGTTGGCCTGAGAGGAGTATGGGGTCAGAGTGAGAATGACATTGAGAGTTGAGGACCACAAAGCCCTAGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000492497.1 |
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| CDS-3UTR CAA 90 bp | GCTAGTATTGAACTCCAGCCTCAAGTAATCTGCCTGCCTTGGTCTTCCAAAGTGCACTCTCTCACTCTGTaGCTCAGGTTGGACTGCAGT | + |
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Preference number: 5 (lower is better) Translates to: ASIELQPQVICLPWSSKVHSLTL*LRLDCS Trigger: ACTGCAGTCCAACCTGAGCAACAGAGTGAGAGAGTG...CACTTTGGAAGACCAAGGCAGGCAGATTACTTGAGGCTGGAGTTCAATACTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| CDS-3UTR CAA 90 bp | TATAGTAAAACTTTGCAAACACTTGTACGTGGCAAATGGACTTTTCTGGCATTTTCCGAGCCTCGCGCCTaGGCTCTAAGACGCCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: YSKTLQTLVRGKWTFLAFSEPRA*ALRRPG Trigger: TCCTGGGCGTCTTAGAGCCAAGGCGCGAGGCTCGGA...AAATGCCAGAAAAGTCCATTTGCCACGTACAAGTGTTTGCAAAGTTTTACTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| CDS-3UTR CAA 90 bp | GCTAGTATTGAACTCCAGCCTCAAGTAATCTGCCTGCCTTGGTCTTCCAAAGTGGCATTACCATATGCTTaGTCTAGACTCATGCCAGCC | + |
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Preference number: 5 (lower is better) Translates to: ASIELQPQVICLPWSSKVALPYA*SRLMPA Trigger: GGCTGGCATGAGTCTAGACAAAGCATATGGTAATGC...CACTTTGGAAGACCAAGGCAGGCAGATTACTTGAGGCTGGAGTTCAATACTAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| CDS-3UTR CAA 90 bp | GGATGGTGTTTTATAAGGCATATGAAGACTGGGGTCCCAACATTACCCTCTCCCCATTGGAGGAGTATTTaGTATCCACACACACACACC | + |
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Preference number: 5 (lower is better) Translates to: GWCFIRHMKTGVPTLPSPHWRSI*YPHTHT Trigger: GGTGTGTGTGTGTGGATACAAAATACTCCTCCAATG...GGGAGAGGGTAATGTTGGGACCCCAGTCTTCATATGCCTTATAAAACACCATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| CDS CCA 90 bp | TATACTGTATTGCTATTCTACACTCTCTTCCTGGCTAGGGCTTTGTaGTCCTCAACTCTCAATGTCATTCTCACTCTGACCCCATACTCC | + |
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Preference number: 5 (lower is better) Translates to: YTVLLFYTLFLARAL*SSTLNVILTLTPYS Trigger: GGAGTATGGGGTCAGAGTGAGAATGACATTGAGAGTTGAGGACCACAAAGCCCTAGCCAGGAAGAGAGTGTAGAATAGCAATACAGTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492497.1 |
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| CDS-3UTR CAA 90 bp | GCTAGTATTGAACTCCAGCCTCAAGTAATCTGCCTGCCTTGGTCTTCCAAAGTGAACTGCATAATGATCTaGGTTCTTCCAGTCTTTGGG | + |
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Preference number: 5 (lower is better) Translates to: ASIELQPQVICLPWSSKVNCIMI*VLPVFG Trigger: CCCAAAGACTGGAAGAACCAAGATCATTATGCAGTT...CACTTTGGAAGACCAAGGCAGGCAGATTACTTGAGGCTGGAGTTCAATACTAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| CDS-3UTR CAA 90 bp | CCGGCCAATGCTATTCTTTCGTATAGTAAAACTTTGCAAACACTTGTACGTGGCACTCTGTTGCTCAGGTaGGACTGCAGTGGTACAATC | + |
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Preference number: 5 (lower is better) Translates to: PANAILSYSKTLQTLVRGTLLLR*DCSGTI Trigger: GATTGTACCACTGCAGTCCAACCTGAGCAACAGAGT...GCCACGTACAAGTGTTTGCAAAGTTTTACTATACGAAAGAATAGCATTGGCCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| CDS CCA 90 bp | CAGGGACTTAGAAGTATACTGTATTGCTATTCTACACTCTCTTCCTaGCTAGGGCTTTGTGGTCCTCAACTCTCAATGTCATTCTCACTC | + |
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Preference number: 5 (lower is better) Translates to: QGLRSILYCYSTLSS*LGLCGPQLSMSFSL Trigger: GAGTGAGAATGACATTGAGAGTTGAGGACCACAAAGCCCTAGCCAGGAAGAGAGTGTAGAATAGCAATACAGTATACTTCTAAGTCCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492497.1 |
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| CDS-3UTR CAA 90 bp | GCTAGTATTGAACTCCAGCCTCAAGTAATCTGCCTGCCTTGGTCTTCCAAAGTGAAACTTTGCAAACACTaGTACGTGGCAAATGGACTT | + |
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Preference number: 5 (lower is better) Translates to: ASIELQPQVICLPWSSKVKLCKH*YVANGL Trigger: AAGTCCATTTGCCACGTACAAGTGTTTGCAAAGTTT...CACTTTGGAAGACCAAGGCAGGCAGATTACTTGAGGCTGGAGTTCAATACTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| CDS GCA 90 bp | TGTGGCACAGAATTTATCTCTGCAAGTTTCTGTGATAACAAGTGCTaGTATTTGGAGTCTGTCTACATTATCTCCAGGCTCCAGTGTGAG | + |
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Preference number: 5 (lower is better) Translates to: CGTEFISASFCDNKC*YLESVYIISRLQCE Trigger: CTCACACTGGAGCCTGGAGATAATGTAGACAGACTCCAAATAGCAGCACTTGTTATCACAGAAACTTGCAGAGATAAATTCTGTGCCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000475090.1 ENST00000492497.1 |
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| CDS-3UTR CAA 90 bp | GGATGGTGTTTTATAAGGCATATGAAGACTGGGGTCCCAACATTACCCTCTCCCTTTAAAAGCTTGCCATaGGAGGAGTATTTTGTATCC | + |
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Preference number: 5 (lower is better) Translates to: GWCFIRHMKTGVPTLPSPFKSLP*EEYFVS Trigger: GGATACAAAATACTCCTCCAATGGCAAGCTTTTAAA...GGGAGAGGGTAATGTTGGGACCCCAGTCTTCATATGCCTTATAAAACACCATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| CDS GCA 90 bp | ATCTGCACAAATATCATAAGTCAGGGACTTAGAAGTATACTGTATTaGTATTCTACACTCTCTTCCTGGCTAGGGCTTTGTGGTCCTCAA | + |
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Preference number: 5 (lower is better) Translates to: ICTNIISQGLRSILY*YSTLSSWLGLCGPQ Trigger: TTGAGGACCACAAAGCCCTAGCCAGGAAGAGAGTGTAGAATAGCAATACAGTATACTTCTAAGTCCCTGACTTATGATATTTGTGCAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492497.1 |
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| CDS-3UTR CAA 90 bp | CACGCCCGGCCAATGCTATTCTTTCGTATAGTAAAACTTTGCAAACACTTGTACTCGTATAGTAAAACTTaGCAAACACTTGTACGTGGC | + |
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Preference number: 5 (lower is better) Translates to: HARPMLFFRIVKLCKHLYSYSKT*QTLVRG Trigger: GCCACGTACAAGTGTTTGCAAAGTTTTACTATACGA...GTACAAGTGTTTGCAAAGTTTTACTATACGAAAGAATAGCATTGGCCGGGCGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| CDS-3UTR CAA 90 bp | CCGGCCAATGCTATTCTTTCGTATAGTAAAACTTTGCAAACACTTGTACGTGGCGGTGCTGCAAAATTTTaGGCTAGAGAATACATATTC | + |
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Preference number: 5 (lower is better) Translates to: PANAILSYSKTLQTLVRGGAAKF*AREYIF Trigger: GAATATGTATTCTCTAGCCAAAAATTTTGCAGCACC...GCCACGTACAAGTGTTTGCAAAGTTTTACTATACGAAAGAATAGCATTGGCCGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| CDS CCA 90 bp | AACAAGTATTCTGTCATATGTATATGTGCATGTGTACTGATGCAATaGGTAAGACTGACAGCTTCAAAATGCACCTCACTTTTCACACTT | + |
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Preference number: 5 (lower is better) Translates to: NKYSVICICACVLMQ*VRLTASKCTSLFTL Trigger: AAGTGTGAAAAGTGAGGTGCATTTTGAAGCTGTCAGTCTTACCCATTGCATCAGTACACATGCACATATACATATGACAGAATACTTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492497.1 |
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| CDS CCA 90 bp | TTTTTACTGCAGAAAGGTTATAGTATGTACAGAATGAGCTCAGATTaGTGGTCTAATTATGCTGCTACTATAAATTCCTGTTGCCTGGAC | + |
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Preference number: 5 (lower is better) Translates to: FLLQKGYSMYRMSSD*WSNYAATINSCCLD Trigger: GTCCAGGCAACAGGAATTTATAGTAGCAGCATAATTAGACCACCAATCTGAGCTCATTCTGTACATACTATAACCTTTCTGCAGTAAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000492497.1 |
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| CDS-3UTR CAA 90 bp | CAACATTACCCTCTCCCATGCCAAATTATAACCTTGTCAATGAAAACAACAATAGTAATGGGGACGATTTaGAGTTCATCTACTATGCTA | + |
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Preference number: 5 (lower is better) Translates to: QHYPLPCQIITLSMKTTIVMGTI*SSSTML Trigger: TAGCATAGTAGATGAACTCAAAATCGTCCCCATTAC...TATTGTTGTTTTCATTGACAAGGTTATAATTTGGCATGGGAGAGGGTAATGTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| CDS-3UTR CAA 90 bp | CAACATTACCCTCTCCCATGCCAAATTATAACCTTGTCAATGAAAACAACAATAATTATGTCCACAGGATaGCAAAGCATAGGACATTTA | + |
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Preference number: 5 (lower is better) Translates to: QHYPLPCQIITLSMKTTIIMSTG*QSIGHL Trigger: TAAATGTCCTATGCTTTGCAATCCTGTGGACATAAT...TATTGTTGTTTTCATTGACAAGGTTATAATTTGGCATGGGAGAGGGTAATGTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412522.1 |
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| CDS CCA 72 bp | GGCAGAAGCAGCATGATGGCGCCGGGTCTAGCCCGGTaGGCGCAGCGGCTCACGTCCCGGGCGGAGGGCGCT | + |
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Preference number: 6 (lower is better) Translates to: GRSSMMAPGLAR*AQRLTSRAEGA Trigger: AGCGCCCTCCGCCCGGGACGTGAGCCGCTGCGCCCACCGGGCTAGACCCGGCGCCATCATGCTGCTTCTGCC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000379257.7 ENST00000379263.8 ENST00000412522.1 ENST00000454277.5 |
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| CDS CCA 72 bp | GTGGGTGATGGCGGTGCCCCGGCCGTCCGCGGCGCTTaGCAGAAGCAGCATGATGGCGCCGGGTCTAGCCCG | + |
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Preference number: 6 (lower is better) Translates to: VGDGGAPAVRGA*QKQHDGAGSSP Trigger: CGGGCTAGACCCGGCGCCATCATGCTGCTTCTGCCAAGCGCCGCGGACGGCCGGGGCACCGCCATCACCCAC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000249270.11 ENST00000379257.7 ENST00000379263.8 ENST00000412522.1 ENST00000454277.5 |
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| CDS CAA 90 bp | CTTAGGGTCCCCTCCAGCTCTACCTCTCACTCCGAGCCTCGCGCCTaGGCTCTAAGACGCCCAGGAACCGGCGCATGGAGACGACCAGTA | + |
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Preference number: 6 (lower is better) Translates to: LRVPSSSTSHSEPRA*ALRRPGTGAWRRPV Trigger: TACTGGTCGTCTCCATGCGCCGGTTCCTGGGCGTCTTAGAGCCAAGGCGCGAGGCTCGGAGTGAGAGGTAGAGCTGGAGGGGACCCTAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379257.7 ENST00000412522.1 ENST00000454277.5 |
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| CDS CCA 72 bp | CGCGCCTTGGCTCTAAGACGCCCAGGAACCGGCGCATaGAGACGACCAGTAAGCACTTCCGGGATGGATCTT | + |
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Preference number: 6 (lower is better) Translates to: RALALRRPGTGA*RRPVSTSGMDL Trigger: AAGATCCATCCCGGAAGTGCTTACTGGTCGTCTCCATGCGCCGGTTCCTGGGCGTCTTAGAGCCAAGGCGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379257.7 ENST00000412522.1 |
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| CDS CCA 72 bp | TTGCTATTCTACACTCTCTTCCTGGCTAGGGCTTTGTaGTCCTCAACTCTCAATGTCATTCTCACTCTGACC | + |
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Preference number: 6 (lower is better) Translates to: LLFYTLFLARAL*SSTLNVILTLT Trigger: GGTCAGAGTGAGAATGACATTGAGAGTTGAGGACCACAAAGCCCTAGCCAGGAAGAGAGTGTAGAATAGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492497.1 |
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| CDS CAA 90 bp | AAGTATACTGTATTGCTATTCTACACTCTCTTCCTGGCTAGGGCTTaGTGGTCCTCAACTCTCAATGTCATTCTCACTCTGACCCCATAC | + |
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Preference number: 6 (lower is better) Translates to: KYTVLLFYTLFLARA*WSSTLNVILTLTPY Trigger: GTATGGGGTCAGAGTGAGAATGACATTGAGAGTTGAGGACCACAAAGCCCTAGCCAGGAAGAGAGTGTAGAATAGCAATACAGTATACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492497.1 |
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| CDS CCA 72 bp | AGAAGTATACTGTATTGCTATTCTACACTCTCTTCCTaGCTAGGGCTTTGTGGTCCTCAACTCTCAATGTCA | + |
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Preference number: 6 (lower is better) Translates to: RSILYCYSTLSS*LGLCGPQLSMS Trigger: TGACATTGAGAGTTGAGGACCACAAAGCCCTAGCCAGGAAGAGAGTGTAGAATAGCAATACAGTATACTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492497.1 |
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| CDS CAA 90 bp | ACAGAATTTATCTCTGCAAGTTTCTGTGATAACAAGTGCTGCTATTaGGAGTCTGTCTACATTATCTCCAGGCTCCAGTGTGAGTTGAAG | + |
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Preference number: 6 (lower is better) Translates to: TEFISASFCDNKCCY*ESVYIISRLQCELK Trigger: CTTCAACTCACACTGGAGCCTGGAGATAATGTAGACAGACTCCAAATAGCAGCACTTGTTATCACAGAAACTTGCAGAGATAAATTCTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000475090.1 ENST00000492497.1 |
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| CDS GCA 72 bp | AATATCATAAGTCAGGGACTTAGAAGTATACTGTATTaGTATTCTACACTCTCTTCCTGGCTAGGGCTTTGT | + |
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Preference number: 6 (lower is better) Translates to: NIISQGLRSILY*YSTLSSWLGLC Trigger: ACAAAGCCCTAGCCAGGAAGAGAGTGTAGAATAGCAATACAGTATACTTCTAAGTCCCTGACTTATGATATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492497.1 |
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| CDS TCA 72 bp | GATTTTTACTGCAGAAAGGTTATAGTATGTACAGAATaGGCTCAGATTGGTGGTCTAATTATGCTGCTACTA | + |
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Preference number: 6 (lower is better) Translates to: DFYCRKVIVCTE*AQIGGLIMLLL Trigger: TAGTAGCAGCATAATTAGACCACCAATCTGAGCTCATTCTGTACATACTATAACCTTTCTGCAGTAAAAATC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000492497.1 |
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| CDS CCA 72 bp | CAGAAAGGTTATAGTATGTACAGAATGAGCTCAGATTaGTGGTCTAATTATGCTGCTACTATAAATTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: QKGYSMYRMSSD*WSNYAATINSC Trigger: ACAGGAATTTATAGTAGCAGCATAATTAGACCACCAATCTGAGCTCATTCTGTACATACTATAACCTTTCTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492497.1 |
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| CDS CCA 72 bp | AGAATCAAAATTATACCTGGAATTCCTTTCAAACACTaGGGTAAACACTTCGAAGAAATTATCCTTTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: RIKIIPGIPFKH*GKHFEEIILCF Trigger: GAAGCAAAGGATAATTTCTTCGAAGTGTTTACCCCAGTGTTTGAAAGGAATTCCAGGTATAATTTTGATTCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426036.6 |
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