RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DNAJC14 (Homo sapiens)

Ensembl gene IDs: ENSG00000135392

Ensembl transcript IDs: ENST00000317287.5, ENST00000357606.7, ENST00000546957.2, ENST00000547445.2, ENST00000678005.2

Found 593 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp ACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTAGGTTCTTTACTCCCGGGAGACAGAGGTTaGAGTAAGCTGAGATCACAC +
Preference number: 2 (lower is better)
Translates to: TPKGIHCPAQVQALGSLLPGDRG*SKLRSH
Trigger: GTGTGATCTCAGCTTACTGCAACCTCTGTCTCCCGG...GAGTAAAGAACCTAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
3UTR-3UTR GCA 90 bp CCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCTCAAACTCCATCCTGTaGTACAGCCCTTTTGACTCC +
Preference number: 2 (lower is better)
Translates to: PGKYPVPTPKGIHCPAQVSNSIL*YSPFDS
Trigger: GGAGTCAAAAGGGCTGTAGCACAGGATGGAGTTTGA...GACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
3UTR-3UTR GCA 90 bp AAATACAAACCCTTGGATCACATGGGGGCTTCTGGGAACCCCCGTATTCTTCCCCCGGGAGACAGAGGTTaGAGTAAGCTGAGATCACAC +
Preference number: 2 (lower is better)
Translates to: KYKPLDHMGASGNPRILPPGDRG*SKLRSH
Trigger: GTGTGATCTCAGCTTACTGCAACCTCTGTCTCCCGG...GGGAAGAATACGGGGGTTCCCAGAAGCCCCCATGTGATCCAAGGGTTTGTATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
3UTR-3UTR GCA 90 bp ACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTAGGTTCTTTACTCCTGAGATGGGAGAATTaGTTGAACCCGGGAGACAGA +
Preference number: 2 (lower is better)
Translates to: TPKGIHCPAQVQALGSLLLRWEN*LNPGDR
Trigger: TCTGTCTCCCGGGTTCAAGCAATTCTCCCATCTCAG...GAGTAAAGAACCTAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
3UTR-3UTR CCA 90 bp CAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCTCAGTTCCTAGGTGTTaGGGGAGGAGGGATAAATCA +
Preference number: 2 (lower is better)
Translates to: QGNTQFPHLKGYTVQPRSSVPRC*GRRDKS
Trigger: TGATTTATCCCTCCTCCCCCAACACCTAGGAACTGA...GGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
3UTR-3UTR TCA 90 bp GCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCCCACACGATGGGAGAATTGCTTaGACCCGGGAGACAGAGGTT +
Preference number: 2 (lower is better)
Translates to: ANDKTKAYRPQGNTQFPHDGRIA*TRETEV
Trigger: AACCTCTGTCTCCCGGGTTCAAGCAATTCTCCCATC...GTGTGGGAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
3UTR-3UTR TCA 90 bp ATACAGACCCCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGATGGGAGAATTGCTTaGACCCGGGAGACAGAGGTT +
Preference number: 2 (lower is better)
Translates to: IQTPGKYPVPTPKGIHCPDGRIA*TRETEV
Trigger: AACCTCTGTCTCCCGGGTTCAAGCAATTCTCCCATC...TGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGGGGTCTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
3UTR-3UTR GCA 90 bp GCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCCCACACCCGGGAGACAGAGGTTaGAGTAAGCTGAGATCACAC +
Preference number: 2 (lower is better)
Translates to: ANDKTKAYRPQGNTQFPHPGDRG*SKLRSH
Trigger: GTGTGATCTCAGCTTACTGCAACCTCTGTCTCCCGG...GTGTGGGAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
3UTR-3UTR CCA 90 bp GAACCCCCGTATTCTTCCCCCTCACCCAAGGGCAGTGGGCATGAATCTACTTTTTCAGTTCCTAGGTGTTaGGGGAGGAGGGATAAATCA +
Preference number: 2 (lower is better)
Translates to: EPPYSSPSPKGSGHESTFSVPRC*GRRDKS
Trigger: TGATTTATCCCTCCTCCCCCAACACCTAGGAACTGA...AAAAGTAGATTCATGCCCACTGCCCTTGGGTGAGGGGGAAGAATACGGGGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
3UTR-3UTR GCA 90 bp AAATACAAACCCTTGGATCACATGGGGGCTTCTGGGAACCCCCGTATTCTTCCCTCAAACTCCATCCTGTaGTACAGCCCTTTTGACTCC +
Preference number: 2 (lower is better)
Translates to: KYKPLDHMGASGNPRILPSNSIL*YSPFDS
Trigger: GGAGTCAAAAGGGCTGTAGCACAGGATGGAGTTTGA...GGGAAGAATACGGGGGTTCCCAGAAGCCCCCATGTGATCCAAGGGTTTGTATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
3UTR-3UTR TCA 90 bp CTAAAAGCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCGATGGGAGAATTGCTTaGACCCGGGAGACAGAGGTT +
Preference number: 2 (lower is better)
Translates to: LKANDKTKAYRPQGNTQFDGRIA*TRETEV
Trigger: AACCTCTGTCTCCCGGGTTCAAGCAATTCTCCCATC...GAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGCTTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
3UTR-3UTR TCA 90 bp AAATACAAACCCTTGGATCACATGGGGGCTTCTGGGAACCCCCGTATTCTTCCCGAGCCTAAAATTGGGTaGTTTACCCACAAAGTGAAA +
Preference number: 2 (lower is better)
Translates to: KYKPLDHMGASGNPRILPEPKIG*FTHKVK
Trigger: TTTCACTTTGTGGGTAAATCACCCAATTTTAGGCTC...GGGAAGAATACGGGGGTTCCCAGAAGCCCCCATGTGATCCAAGGGTTTGTATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
3UTR-3UTR GCA 90 bp CTAAAAGCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCCTGAGATGGGAGAATTaGTTGAACCCGGGAGACAGA +
Preference number: 2 (lower is better)
Translates to: LKANDKTKAYRPQGNTQFLRWEN*LNPGDR
Trigger: TCTGTCTCCCGGGTTCAAGCAATTCTCCCATCTCAG...GAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGCTTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
3UTR-3UTR CCA 90 bp CTAAAAGCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCTCAGTTCCTAGGTGTTaGGGGAGGAGGGATAAATCA +
Preference number: 2 (lower is better)
Translates to: LKANDKTKAYRPQGNTQFSVPRC*GRRDKS
Trigger: TGATTTATCCCTCCTCCCCCAACACCTAGGAACTGA...GAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGCTTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
3UTR-3UTR GCA 90 bp AAGAGGGAAGATACAGGTTGCCAGTTATACATTTATAGAAAGATAATCCCCTGGCTGAGATGGGAGAATTaGTTGAACCCGGGAGACAGA +
Preference number: 2 (lower is better)
Translates to: KREDTGCQLYIYRKIIPWLRWEN*LNPGDR
Trigger: TCTGTCTCCCGGGTTCAAGCAATTCTCCCATCTCAG...CCAGGGGATTATCTTTCTATAAATGTATAACTGGCAACCTGTATCTTCCCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357606.7
3UTR-3UTR CAA 90 bp TACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTAAGATGGGAGAATTGCTaGAACCCGGGAGACAGAGGT +
Preference number: 3 (lower is better)
Translates to: YPVPTPKGIHCPAQVQALRWENC*NPGDRG
Trigger: ACCTCTGTCTCCCGGGTTCAAGCAATTCTCCCATCT...TAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
3UTR-3UTR CAA 90 bp CAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCGCTGAGATGGGAGAATaGCTTGAACCCGGGAGACAG +
Preference number: 3 (lower is better)
Translates to: QGNTQFPHLKGYTVQPRSAEMGE*LEPGRQ
Trigger: CTGTCTCCCGGGTTCAAGCAATTCTCCCATCTCAGC...GGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
3UTR-3UTR CAA 90 bp CAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGATGGGAGAATTGCTaGAACCCGGGAGACAGAGGT +
Preference number: 3 (lower is better)
Translates to: QGNTQFPHLKGYTVQPRSRWENC*NPGDRG
Trigger: ACCTCTGTCTCCCGGGTTCAAGCAATTCTCCCATCT...GGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
3UTR-3UTR CAA 90 bp CTAAAAGCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCGCTGAGATGGGAGAATaGCTTGAACCCGGGAGACAG +
Preference number: 3 (lower is better)
Translates to: LKANDKTKAYRPQGNTQFAEMGE*LEPGRQ
Trigger: CTGTCTCCCGGGTTCAAGCAATTCTCCCATCTCAGC...GAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGCTTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
3UTR-3UTR CAA 90 bp AAATACAAACCCTTGGATCACATGGGGGCTTCTGGGAACCCCCGTATTCTTCCCGAAAAGAGCCTAAAATaGGGTGATTTACCCACAAAG +
Preference number: 3 (lower is better)
Translates to: KYKPLDHMGASGNPRILPEKSLK*GDLPTK
Trigger: CTTTGTGGGTAAATCACCCAATTTTAGGCTCTTTTC...GGGAAGAATACGGGGGTTCCCAGAAGCCCCCATGTGATCCAAGGGTTTGTATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
3UTR-3UTR CAA 90 bp AGGTTCTTTACTCTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATGCTGAGATGGGAGAATaGCTTGAACCCGGGAGACAG +
Preference number: 3 (lower is better)
Translates to: RFFTLATPYFFGIVKRQDAEMGE*LEPGRQ
Trigger: CTGTCTCCCGGGTTCAAGCAATTCTCCCATCTCAGC...ATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAGAGTAAAGAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
3UTR CCA 72 bp TTATATCAGGATAAAGGAGAGGGCTCCCTCCTGAAATaGGTCAAGAAAGAAGATAGACTTGTAGCTTTAAAA +
Preference number: 3 (lower is better)
Translates to: LYQDKGEGSLLK*VKKEDRLVALK
Trigger: TTTTAAAGCTACAAGTCTATCTTCTTTCTTGACCCATTTCAGGAGGGAGCCCTCTCCTTTATCCTGATATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp TACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTATCGAGCCGCCCGGCCTaGGGCCAGGGTGAGCTACGA +
Preference number: 4 (lower is better)
Translates to: YPVPTPKGIHCPAQVQALSSRPA*GQGELR
Trigger: TCGTAGCTCACCCTGGCCCCAGGCCGGGCGGCTCGA...TAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000678005.2
CDS-3UTR TCA 90 bp CAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCGGCCTGGGGCCAGGGTaGGCTACGAGAGCCGCTCTC +
Preference number: 4 (lower is better)
Translates to: QGNTQFPHLKGYTVQPRSGLGPG*ATRAAL
Trigger: GAGAGCGGCTCTCGTAGCTCACCCTGGCCCCAGGCC...GGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000678005.2
CDS-3UTR CCA 90 bp TACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTATGGTCCTGGACCCCCTaGGGGGCCATGGCTTGGGTC +
Preference number: 4 (lower is better)
Translates to: YPVPTPKGIHCPAQVQALWSWTP*GAMAWV
Trigger: GACCCAAGCCATGGCCCCCCAGGGGGTCCAGGACCA...TAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp CAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCTCGAGCCGCCCGGCCTaGGGCCAGGGTGAGCTACGA +
Preference number: 4 (lower is better)
Translates to: QGNTQFPHLKGYTVQPRSSSRPA*GQGELR
Trigger: TCGTAGCTCACCCTGGCCCCAGGCCGGGCGGCTCGA...GGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000678005.2
CDS-3UTR TCA 90 bp GAACCCCCGTATTCTTCCCCCTCACCCAAGGGCAGTGGGCATGAATCTACTTTTGGCCTGGGGCCAGGGTaGGCTACGAGAGCCGCTCTC +
Preference number: 4 (lower is better)
Translates to: EPPYSSPSPKGSGHESTFGLGPG*ATRAAL
Trigger: GAGAGCGGCTCTCGTAGCTCACCCTGGCCCCAGGCC...AAAAGTAGATTCATGCCCACTGCCCTTGGGTGAGGGGGAAGAATACGGGGGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000678005.2
CDS-3UTR CCA 90 bp CAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCTGGTCCTGGACCCCCTaGGGGGCCATGGCTTGGGTC +
Preference number: 4 (lower is better)
Translates to: QGNTQFPHLKGYTVQPRSWSWTP*GAMAWV
Trigger: GACCCAAGCCATGGCCCCCCAGGGGGTCCAGGACCA...GGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp TACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTACGGCCGCCGGCGACCTaGGCCTACTTCCACTGCTAT +
Preference number: 4 (lower is better)
Translates to: YPVPTPKGIHCPAQVQALRPPAT*AYFHCY
Trigger: ATAGCAGTGGAAGTAGGCCCAGGTCGCCGGCGGCCG...TAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357606.7
CDS-3UTR TCA 90 bp GAACCCCCGTATTCTTCCCCCTCACCCAAGGGCAGTGGGCATGAATCTACTTTTGGTGCTTCTGGGCCATaGCCCCGGGGCTTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: EPPYSSPSPKGSGHESTFGASGP*PRGFLR
Trigger: CCTCAGGAAGCCCCGGGGTCATGGCCCAGAAGCACC...AAAAGTAGATTCATGCCCACTGCCCTTGGGTGAGGGGGAAGAATACGGGGGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp CCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCGTTGGGCTTAGAGGCTaGAGCGGCTCCAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PGKYPVPTPKGIHCPAQVVGLRG*SGSRGR
Trigger: CCTGCCCCTGGAGCCGCTGCAGCCTCTAAGCCCAAC...GACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp GAACCCCCGTATTCTTCCCCCTCACCCAAGGGCAGTGGGCATGAATCTACTTTTGAGGGGCATCTGGGGTaGCTCTCTGCCGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: EPPYSSPSPKGSGHESTFEGHLG*LSAALW
Trigger: CCAGAGGGCGGCAGAGAGCCACCCCAGATGCCCCTC...AAAAGTAGATTCATGCCCACTGCCCTTGGGTGAGGGGGAAGAATACGGGGGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp TACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTAGCTCCAGGGGCAGGCTaGGGAGCTGCAAAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: YPVPTPKGIHCPAQVQALAPGAG*GAAKKF
Trigger: GAACTTCTTTGCAGCTCCTCAGCCTGCCCCTGGAGC...TAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACGGCCTGGGGCCAGGGTaGGCTACGAGAGCCGCTCTC +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDGLGPG*ATRAAL
Trigger: GAGAGCGGCTCTCGTAGCTCACCCTGGCCCCAGGCC...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000678005.2
CDS-3UTR GCA 90 bp GAACCCCCGTATTCTTCCCCCTCACCCAAGGGCAGTGGGCATGAATCTACTTTTGTTGGGCTTAGAGGCTaGAGCGGCTCCAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: EPPYSSPSPKGSGHESTFVGLRG*SGSRGR
Trigger: CCTGCCCCTGGAGCCGCTGCAGCCTCTAAGCCCAAC...AAAAGTAGATTCATGCCCACTGCCCTTGGGTGAGGGGGAAGAATACGGGGGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AAATACAAACCCTTGGATCACATGGGGGCTTCTGGGAACCCCCGTATTCTTCCCTGGTCCTGGACCCCCTaGGGGGCCATGGCTTGGGTC +
Preference number: 4 (lower is better)
Translates to: KYKPLDHMGASGNPRILPWSWTP*GAMAWV
Trigger: GACCCAAGCCATGGCCCCCCAGGGGGTCCAGGACCA...GGGAAGAATACGGGGGTTCCCAGAAGCCCCCATGTGATCCAAGGGTTTGTATTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACGGTGCTTCTGGGCCATaGCCCCGGGGCTTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDGASGP*PRGFLR
Trigger: CCTCAGGAAGCCCCGGGGTCATGGCCCAGAAGCACC...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp GAACCCCCGTATTCTTCCCCCTCACCCAAGGGCAGTGGGCATGAATCTACTTTTCTGCTCGCAAAACCTTaGAGGCCTCCTCAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: EPPYSSPSPKGSGHESTFLLAKP*RPPQPG
Trigger: CCCGGGCTGAGGAGGCCTTCAAGGTTTTGCGAGCAG...AAAAGTAGATTCATGCCCACTGCCCTTGGGTGAGGGGGAAGAATACGGGGGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp AAATACAAACCCTTGGATCACATGGGGGCTTCTGGGAACCCCCGTATTCTTCCCTCTGGGGTGGCTCTCTaGCGCCCTCTGGTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: KYKPLDHMGASGNPRILPSGVAL*RPLVPG
Trigger: TCCAGGCACCAGAGGGCGGCAGAGAGCCACCCCAGA...GGGAAGAATACGGGGGTTCCCAGAAGCCCCCATGTGATCCAAGGGTTTGTATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp AAATACAAACCCTTGGATCACATGGGGGCTTCTGGGAACCCCCGTATTCTTCCCGTTGGGCTTAGAGGCTaGAGCGGCTCCAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: KYKPLDHMGASGNPRILPVGLRG*SGSRGR
Trigger: CCTGCCCCTGGAGCCGCTGCAGCCTCTAAGCCCAAC...GGGAAGAATACGGGGGTTCCCAGAAGCCCCCATGTGATCCAAGGGTTTGTATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACTGGTCCTGGACCCCCTaGGGGGCCATGGCTTGGGTC +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDWSWTP*GAMAWV
Trigger: GACCCAAGCCATGGCCCCCCAGGGGGTCCAGGACCA...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp GCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCCCACACTGGTCCTGGACCCCCTaGGGGGCCATGGCTTGGGTC +
Preference number: 4 (lower is better)
Translates to: ANDKTKAYRPQGNTQFPHWSWTP*GAMAWV
Trigger: GACCCAAGCCATGGCCCCCCAGGGGGTCCAGGACCA...GTGTGGGAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp GAACCCCCGTATTCTTCCCCCTCACCCAAGGGCAGTGGGCATGAATCTACTTTTCTCTGCATCTCTAGGTaGTCCTGGACCCCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: EPPYSSPSPKGSGHESTFLCISR*SWTPWG
Trigger: CCCCCAGGGGGTCCAGGACCACCTAGAGATGCAGAG...AAAAGTAGATTCATGCCCACTGCCCTTGGGTGAGGGGGAAGAATACGGGGGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGAGGGGCATCTGGGGTaGCTCTCTGCCGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFEGHLG*LSAALW
Trigger: CCAGAGGGCGGCAGAGAGCCACCCCAGATGCCCCTC...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp GCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCCCACACGAGGGGCATCTGGGGTaGCTCTCTGCCGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: ANDKTKAYRPQGNTQFPHEGHLG*LSAALW
Trigger: CCAGAGGGCGGCAGAGAGCCACCCCAGATGCCCCTC...GTGTGGGAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp CAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGGTCCTAAAGTCCTaGGGGAGGCACCACCACTGT +
Preference number: 4 (lower is better)
Translates to: QGNTQFPHLKGYTVQPRSRVLKS*GRHHHC
Trigger: ACAGTGGTGGTGCCTCCCTCAGGACTTTAGGACCCT...GGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp TACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTATTGCGCTTATCTGCCTaGCTTCGTTTCCGACCCAGC +
Preference number: 4 (lower is better)
Translates to: YPVPTPKGIHCPAQVQALLRLSA*LRFRPS
Trigger: GCTGGGTCGGAAACGAAGTCAGGCAGATAAGCGCAA...TAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp AAATACAAACCCTTGGATCACATGGGGGCTTCTGGGAACCCCCGTATTCTTCCCCTGCTCGCAAAACCTTaGAGGCCTCCTCAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: KYKPLDHMGASGNPRILPLLAKP*RPPQPG
Trigger: CCCGGGCTGAGGAGGCCTTCAAGGTTTTGCGAGCAG...GGGAAGAATACGGGGGTTCCCAGAAGCCCCCATGTGATCCAAGGGTTTGTATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp GAACCCCCGTATTCTTCCCCCTCACCCAAGGGCAGTGGGCATGAATCTACTTTTGCTCCAGGGGCAGGCTaGGGAGCTGCAAAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: EPPYSSPSPKGSGHESTFAPGAG*GAAKKF
Trigger: GAACTTCTTTGCAGCTCCTCAGCCTGCCCCTGGAGC...AAAAGTAGATTCATGCCCACTGCCCTTGGGTGAGGGGGAAGAATACGGGGGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp AAATACAAACCCTTGGATCACATGGGGGCTTCTGGGAACCCCCGTATTCTTCCCCCTCTTTCTCCGGGGTaGTTCTGGGCCATGACCCCG +
Preference number: 4 (lower is better)
Translates to: KYKPLDHMGASGNPRILPPLSPG*FWAMTP
Trigger: CGGGGTCATGGCCCAGAAGCACCCCGGAGAAAGAGG...GGGAAGAATACGGGGGTTCCCAGAAGCCCCCATGTGATCCAAGGGTTTGTATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp ACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTAGGTTCTTTACTCTTCGTTGGAAAGCGGTaGCGCTGTCTCCGGGATGGG +
Preference number: 4 (lower is better)
Translates to: TPKGIHCPAQVQALGSLLFVGKR*RCLRDG
Trigger: CCCATCCCGGAGACAGCGGCACCGCTTTCCAACGAA...GAGTAAAGAACCTAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp CAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCGCCGCTGCCATGGCCTaGTATCTCTCAGCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: QGNTQFPHLKGYTVQPRSAAAMA*YLSAES
Trigger: TGACTCTGCTGAGAGATAGCAGGCCATGGCAGCGGC...GGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTTCTGGGGTGGCTCTCTaGCGCCCTCTGGTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFSGVAL*RPLVPG
Trigger: TCCAGGCACCAGAGGGCGGCAGAGAGCCACCCCAGA...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp GCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCCCACACTCTGGGGTGGCTCTCTaGCGCCCTCTGGTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: ANDKTKAYRPQGNTQFPHSGVAL*RPLVPG
Trigger: TCCAGGCACCAGAGGGCGGCAGAGAGCCACCCCAGA...GTGTGGGAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGTTGGGCTTAGAGGCTaGAGCGGCTCCAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFVGLRG*SGSRGR
Trigger: CCTGCCCCTGGAGCCGCTGCAGCCTCTAAGCCCAAC...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp GCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCCCACACGTTGGGCTTAGAGGCTaGAGCGGCTCCAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: ANDKTKAYRPQGNTQFPHVGLRG*SGSRGR
Trigger: CCTGCCCCTGGAGCCGCTGCAGCCTCTAAGCCCAAC...GTGTGGGAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp CCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCGAGGCACCACCACTGTaGTGGGCTCCATACAACCCT +
Preference number: 4 (lower is better)
Translates to: PGKYPVPTPKGIHCPAQVEAPPL*WAPYNP
Trigger: AGGGTTGTATGGAGCCCACCACAGTGGTGGTGCCTC...GACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp TACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTACTTGGGTCCAACCAATaGGCTGGGTTTGGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: YPVPTPKGIHCPAQVQALLGSNQ*AGFGCC
Trigger: ACAGCACCCAAACCCAGCCCATTGGTTGGACCCAAG...TAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AAATACAAACCCTTGGATCACATGGGGGCTTCTGGGAACCCCCGTATTCTTCCCCTCTGCATCTCTAGGTaGTCCTGGACCCCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: KYKPLDHMGASGNPRILPLCISR*SWTPWG
Trigger: CCCCCAGGGGGTCCAGGACCACCTAGAGATGCAGAG...GGGAAGAATACGGGGGTTCCCAGAAGCCCCCATGTGATCCAAGGGTTTGTATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp GAACCCCCGTATTCTTCCCCCTCACCCAAGGGCAGTGGGCATGAATCTACTTTTCCGCTGTCTCCGGGATaGGGGTTTCTTTCCGCTGGA +
Preference number: 4 (lower is better)
Translates to: EPPYSSPSPKGSGHESTFPLSPG*GFLSAG
Trigger: TCCAGCGGAAAGAAACCCCCATCCCGGAGACAGCGG...AAAAGTAGATTCATGCCCACTGCCCTTGGGTGAGGGGGAAGAATACGGGGGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp ACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTAGGTTCTTTACTCCTCTCTGCCGCCCTCTaGTGCCTGGAATCCGAGAAC +
Preference number: 4 (lower is better)
Translates to: TPKGIHCPAQVQALGSLLLSAAL*CLESEN
Trigger: GTTCTCGGATTCCAGGCACCAGAGGGCGGCAGAGAG...GAGTAAAGAACCTAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp GAACCCCCGTATTCTTCCCCCTCACCCAAGGGCAGTGGGCATGAATCTACTTTTCTCTCTGCCGCCCTCTaGTGCCTGGAATCCGAGAAC +
Preference number: 4 (lower is better)
Translates to: EPPYSSPSPKGSGHESTFLSAAL*CLESEN
Trigger: GTTCTCGGATTCCAGGCACCAGAGGGCGGCAGAGAG...AAAAGTAGATTCATGCCCACTGCCCTTGGGTGAGGGGGAAGAATACGGGGGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp CAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCGGGGGTCTCTGGTCCTaGACTAGAGCAGTAGGCAAC +
Preference number: 4 (lower is better)
Translates to: QGNTQFPHLKGYTVQPRSGGLWS*TRAVGN
Trigger: GTTGCCTACTGCTCTAGTCCAGGACCAGAGACCCCC...GGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357606.7
ENST00000547445.2
CDS-3UTR CCA 90 bp CAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAACCCTTGGATCACATaGGGGCTTCTGGGAACCCCC +
Preference number: 4 (lower is better)
Translates to: QGNTQFPHLKGYTVQPRSNPWIT*GLLGTP
Trigger: GGGGGTTCCCAGAAGCCCCCATGTGATCCAAGGGTT...GGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp CCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCTTGCGCTTATCTGCCTaGCTTCGTTTCCGACCCAGC +
Preference number: 4 (lower is better)
Translates to: PGKYPVPTPKGIHCPAQVLRLSA*LRFRPS
Trigger: GCTGGGTCGGAAACGAAGTCAGGCAGATAAGCGCAA...GACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp GAACCCCCGTATTCTTCCCCCTCACCCAAGGGCAGTGGGCATGAATCTACTTTTCCTGCCTGTCCAAGTTaGCATAGTTCCTCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: EPPYSSPSPKGSGHESTFPACPS*HSSSAP
Trigger: GGGAGCCGAGGAACTATGTCAACTTGGACAGGCAGG...AAAAGTAGATTCATGCCCACTGCCCTTGGGTGAGGGGGAAGAATACGGGGGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp ACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTAGGTTCTTTACTCCCTGCCTGTCCAAGTTaGCATAGTTCCTCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: TPKGIHCPAQVQALGSLLPACPS*HSSSAP
Trigger: GGGAGCCGAGGAACTATGTCAACTTGGACAGGCAGG...GAGTAAAGAACCTAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTCTGCTCGCAAAACCTTaGAGGCCTCCTCAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFLLAKP*RPPQPG
Trigger: CCCGGGCTGAGGAGGCCTTCAAGGTTTTGCGAGCAG...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACCTGCTCGCAAAACCTTaGAGGCCTCCTCAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDLLAKP*RPPQPG
Trigger: CCCGGGCTGAGGAGGCCTTCAAGGTTTTGCGAGCAG...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACCCTCTTTCTCCGGGGTaGTTCTGGGCCATGACCCCG +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDPLSPG*FWAMTP
Trigger: CGGGGTCATGGCCCAGAAGCACCCCGGAGAAAGAGG...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp CCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCTGGGCTGGGTTTGGGTaGTGTGTGTGCTTAGGACCA +
Preference number: 4 (lower is better)
Translates to: PGKYPVPTPKGIHCPAQVWAGFG*CVCLGP
Trigger: TGGTCCTAAGCACACACAGCACCCAAACCCAGCCCA...GACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp CCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCTGATCAGGGTCCTCTaGATCTCTAGGTGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PGKYPVPTPKGIHCPAQVLIRVL*ISRWSW
Trigger: CCAGGACCACCTAGAGATGCAGAGGACCCTGATCAG...GACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp GAACCCCCGTATTCTTCCCCCTCACCCAAGGGCAGTGGGCATGAATCTACTTTTGCCGCTGCCATGGCCTaGTATCTCTCAGCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: EPPYSSPSPKGSGHESTFAAAMA*YLSAES
Trigger: TGACTCTGCTGAGAGATAGCAGGCCATGGCAGCGGC...AAAAGTAGATTCATGCCCACTGCCCTTGGGTGAGGGGGAAGAATACGGGGGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp ACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTAGGTTCTTTACTCTCTGCCGCCCTCTGGTaGCTGGAATCCGAGAACCAA +
Preference number: 4 (lower is better)
Translates to: TPKGIHCPAQVQALGSLLSAALW*LESENQ
Trigger: TTGGTTCTCGGATTCCAGGCACCAGAGGGCGGCAGA...GAGTAAAGAACCTAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTCCACGTAGACCCAGTTaGGTCCCCGTTCCGTCGGTC +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFPRRPS*VPVPSV
Trigger: GACCGACGGAACGGGGACCCAACTGGGTCTACGTGG...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000317287.5
CDS-3UTR CCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGTGTGTTCTGATGCCTaGATCCGCCCCTCGGGTCGC +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFVCSDA*IRPSGR
Trigger: GCGACCCGAGGGGCGGATCCAGGCATCAGAACACAC...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000317287.5
CDS-3UTR CCA 90 bp CAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCGCACCACCACTGTGGTaGGCTCCATACAACCCTCTT +
Preference number: 4 (lower is better)
Translates to: QGNTQFPHLKGYTVQPRSAPPLW*APYNPL
Trigger: AAGAGGGTTGTATGGAGCCCACCACAGTGGTGGTGC...GGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp ACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTAGGTTCTTTACTCGAGGCACCACCACTGTaGTGGGCTCCATACAACCCT +
Preference number: 4 (lower is better)
Translates to: TPKGIHCPAQVQALGSLLEAPPL*WAPYNP
Trigger: AGGGTTGTATGGAGCCCACCACAGTGGTGGTGCCTC...GAGTAAAGAACCTAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp CAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCCCAATGGGCTGGGTTTaGGTGCTGTGTGTGCTTAGG +
Preference number: 4 (lower is better)
Translates to: QGNTQFPHLKGYTVQPRSPMGWV*VLCVLR
Trigger: CCTAAGCACACACAGCACCCAAACCCAGCCCATTGG...GGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp CAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCCTTGGGTCCAACCAATaGGCTGGGTTTGGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: QGNTQFPHLKGYTVQPRSLGSNQ*AGFGCC
Trigger: ACAGCACCCAAACCCAGCCCATTGGTTGGACCCAAG...GGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTCTCTGCATCTCTAGGTaGTCCTGGACCCCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFLCISR*SWTPWG
Trigger: CCCCCAGGGGGTCCAGGACCACCTAGAGATGCAGAG...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp TACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTAATCTTCCCCCAAAGCTaGAGAGGTACAGTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: YPVPTPKGIHCPAQVQALIFPQS*RGTVVA
Trigger: TGCCACCACTGTACCTCTCCAGCTTTGGGGGAAGAT...TAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AAATACAAACCCTTGGATCACATGGGGGCTTCTGGGAACCCCCGTATTCTTCCCCCGCTGTCTCCGGGATaGGGGTTTCTTTCCGCTGGA +
Preference number: 4 (lower is better)
Translates to: KYKPLDHMGASGNPRILPPLSPG*GFLSAG
Trigger: TCCAGCGGAAAGAAACCCCCATCCCGGAGACAGCGG...GGGAAGAATACGGGGGTTCCCAGAAGCCCCCATGTGATCCAAGGGTTTGTATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGTCGACCAGGGGACCTaGGATCCCTACGTCCACCCT +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFVDQGT*DPYVHP
Trigger: AGGGTGGACGTAGGGATCCCAGGTCCCCTGGTCGAC...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACGTCGACCAGGGGACCTaGGATCCCTACGTCCACCCT +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDVDQGT*DPYVHP
Trigger: AGGGTGGACGTAGGGATCCCAGGTCCCCTGGTCGAC...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp GCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCCCACACGTCGACCAGGGGACCTaGGATCCCTACGTCCACCCT +
Preference number: 4 (lower is better)
Translates to: ANDKTKAYRPQGNTQFPHVDQGT*DPYVHP
Trigger: AGGGTGGACGTAGGGATCCCAGGTCCCCTGGTCGAC...GTGTGGGAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp GAACCCCCGTATTCTTCCCCCTCACCCAAGGGCAGTGGGCATGAATCTACTTTTTACCAGCCGCTGCCATaGCCTGCTATCTCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: EPPYSSPSPKGSGHESTFYQPLP*PAISQQ
Trigger: CTGCTGAGAGATAGCAGGCCATGGCAGCGGCTGGTA...AAAAGTAGATTCATGCCCACTGCCCTTGGGTGAGGGGGAAGAATACGGGGGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp CAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCGAGATACCTACACGCTaGCATCCAGCCCACTCTGTG +
Preference number: 4 (lower is better)
Translates to: QGNTQFPHLKGYTVQPRSEIPTR*HPAHSV
Trigger: CACAGAGTGGGCTGGATGCCAGCGTGTAGGTATCTC...GGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp TACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTAGACTCTGTGGGTATCTaGGGAGATACCTACACGCTG +
Preference number: 4 (lower is better)
Translates to: YPVPTPKGIHCPAQVQALDSVGI*GDTYTL
Trigger: CAGCGTGTAGGTATCTCCCCAGATACCCACAGAGTC...TAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp CTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATTCAGGCCGGGCAGAGGGGCATCTGGGGTaGCTCTCTGCCGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LATPYFFGIVKRQDSGRAEGHLG*LSAALW
Trigger: CCAGAGGGCGGCAGAGAGCCACCCCAGATGCCCCTC...TGCCCGGCCTGAATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp TACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTAATTGGGCATCTGCCCTaGGGGTACTTGAAAGATCCG +
Preference number: 4 (lower is better)
Translates to: YPVPTPKGIHCPAQVQALIGHLP*GYLKDP
Trigger: CGGATCTTTCAAGTACCCCCAGGGCAGATGCCCAAT...TAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp TACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTACAAAGAAGTTCCCATTaGGCATCTGCCCTGGGGGTA +
Preference number: 4 (lower is better)
Translates to: YPVPTPKGIHCPAQVQALQRSSH*ASALGV
Trigger: TACCCCCAGGGCAGATGCCCAATGGGAACTTCTTTG...TAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp CTAAAAGCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCTCGAGCCGCCCGGCCTaGGGCCAGGGTGAGCTACGA +
Preference number: 4 (lower is better)
Translates to: LKANDKTKAYRPQGNTQFSSRPA*GQGELR
Trigger: TCGTAGCTCACCCTGGCCCCAGGCCGGGCGGCTCGA...GAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGCTTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000678005.2
CDS-3UTR CCA 90 bp GAACCCCCGTATTCTTCCCCCTCACCCAAGGGCAGTGGGCATGAATCTACTTTTAACCCTTGGATCACATaGGGGCTTCTGGGAACCCCC +
Preference number: 4 (lower is better)
Translates to: EPPYSSPSPKGSGHESTFNPWIT*GLLGTP
Trigger: GGGGGTTCCCAGAAGCCCCCATGTGATCCAAGGGTT...AAAAGTAGATTCATGCCCACTGCCCTTGGGTGAGGGGGAAGAATACGGGGGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp AAATACAAACCCTTGGATCACATGGGGGCTTCTGGGAACCCCCGTATTCTTCCCAGGGTCCTAAAGTCCTaGGGGAGGCACCACCACTGT +
Preference number: 4 (lower is better)
Translates to: KYKPLDHMGASGNPRILPRVLKS*GRHHHC
Trigger: ACAGTGGTGGTGCCTCCCTCAGGACTTTAGGACCCT...GGGAAGAATACGGGGGTTCCCAGAAGCCCCCATGTGATCCAAGGGTTTGTATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp CAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCTCCCTGCTGAGTCCCTaGGTCCTGAGAATGAAGGTA +
Preference number: 4 (lower is better)
Translates to: QGNTQFPHLKGYTVQPRSSLLSP*VLRMKV
Trigger: TACCTTCATTCTCAGGACTCAGGGACTCAGCAGGGA...GGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp CCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCTTAGAAACTGAAACATaGCCTGGGCCCAGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: PGKYPVPTPKGIHCPAQVLETET*PGPSPL
Trigger: TAGGGGGCTGGGCCCAGGTCATGTTTCAGTTTCTAA...GACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp CCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCTTCAGTTCAACATCTaGTGCTGTGGCCTCAACCCC +
Preference number: 4 (lower is better)
Translates to: PGKYPVPTPKGIHCPAQVLQFNI*CCGLNP
Trigger: GGGGTTGAGGCCACAGCATCAGATGTTGAACTGAAG...GACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp CCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCGACTCAAGAAATCCTaGAGATCAGCAGGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: PGKYPVPTPKGIHCPAQVRLKKS*RSAGGA
Trigger: TGCCCCTCCTGCTGATCTTCAGGATTTCTTGAGTCG...GACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGCTCCAGGGGCAGGCTaGGGAGCTGCAAAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFAPGAG*GAAKKF
Trigger: GAACTTCTTTGCAGCTCCTCAGCCTGCCCCTGGAGC...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp ATACAGACCCCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCTCCAGGGGCAGGCTaGGGAGCTGCAAAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: IQTPGKYPVPTPKGIHCPAPGAG*GAAKKF
Trigger: GAACTTCTTTGCAGCTCCTCAGCCTGCCCCTGGAGC...TGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGGGGTCTGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACGCTCCAGGGGCAGGCTaGGGAGCTGCAAAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDAPGAG*GAAKKF
Trigger: GAACTTCTTTGCAGCTCCTCAGCCTGCCCCTGGAGC...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp CCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCGAGAGGGCTCCCTCCTaGAATGGGTCAAGAAAGAAG +
Preference number: 4 (lower is better)
Translates to: PGKYPVPTPKGIHCPAQVERAPS*NGSRKK
Trigger: CTTCTTTCTTGACCCATTTCAGGAGGGAGCCCTCTC...GACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACCCGATCACCGAGCGGTaGCTAGGAACTGGGAGCGTA +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDPITER*LGTGSV
Trigger: TACGCTCCCAGTTCCTAGGCACCGCTCGGTGATCGG...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317287.5
CDS-3UTR GCA 90 bp GAACCCCCGTATTCTTCCCCCTCACCCAAGGGCAGTGGGCATGAATCTACTTTTTGGGCTGGGTTTGGGTaGTGTGTGTGCTTAGGACCA +
Preference number: 4 (lower is better)
Translates to: EPPYSSPSPKGSGHESTFWAGFG*CVCLGP
Trigger: TGGTCCTAAGCACACACAGCACCCAAACCCAGCCCA...AAAAGTAGATTCATGCCCACTGCCCTTGGGTGAGGGGGAAGAATACGGGGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACTTCGTTGGAAAGCGGTaGCGCTGTCTCCGGGATGGG +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDFVGKR*RCLRDG
Trigger: CCCATCCCGGAGACAGCGGCACCGCTTTCCAACGAA...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp GCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCCCACACTTCGTTGGAAAGCGGTaGCGCTGTCTCCGGGATGGG +
Preference number: 4 (lower is better)
Translates to: ANDKTKAYRPQGNTQFPHFVGKR*RCLRDG
Trigger: CCCATCCCGGAGACAGCGGCACCGCTTTCCAACGAA...GTGTGGGAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp CAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCGCCTTTGCGCTTATCTaGCTGACTTCGTTTCCGACC +
Preference number: 4 (lower is better)
Translates to: QGNTQFPHLKGYTVQPRSAFALI*LTSFPT
Trigger: GGTCGGAAACGAAGTCAGGCAGATAAGCGCAAAGGC...GGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp TACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTAACAATCCCAGGCCTTTaGGCTTATCTGCCTGACTTC +
Preference number: 4 (lower is better)
Translates to: YPVPTPKGIHCPAQVQALTIPGL*AYLPDF
Trigger: GAAGTCAGGCAGATAAGCGCAAAGGCCTGGGATTGT...TAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp TACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTAGACAATGTCCCAAGCTaGTCGCAAAACCTTGAAGGC +
Preference number: 4 (lower is better)
Translates to: YPVPTPKGIHCPAQVQALDNVPS*SQNLEG
Trigger: GCCTTCAAGGTTTTGCGAGCAGCTTGGGACATTGTC...TAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp AAATACAAACCCTTGGATCACATGGGGGCTTCTGGGAACCCCCGTATTCTTCCCTCTGCCGCCCTCTGGTaGCTGGAATCCGAGAACCAA +
Preference number: 4 (lower is better)
Translates to: KYKPLDHMGASGNPRILPSAALW*LESENQ
Trigger: TTGGTTCTCGGATTCCAGGCACCAGAGGGCGGCAGA...GGGAAGAATACGGGGGTTCCCAGAAGCCCCCATGTGATCCAAGGGTTTGTATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp GAACCCCCGTATTCTTCCCCCTCACCCAAGGGCAGTGGGCATGAATCTACTTTTAGAATTGGAGGGGCCTaGCTTGTGATGTCACCCCTC +
Preference number: 4 (lower is better)
Translates to: EPPYSSPSPKGSGHESTFRIGGA*LVMSPL
Trigger: GAGGGGTGACATCACAAGGCAGGCCCCTCCAATTCT...AAAAGTAGATTCATGCCCACTGCCCTTGGGTGAGGGGGAAGAATACGGGGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000547445.2
CDS-3UTR CCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTCAAAAGCCCCTTCCCTaGTCCACGATCCCGACCACC +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFQKPLP*STIPTT
Trigger: GGTGGTCGGGATCGTGGACCAGGGAAGGGGCTTTTG...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000317287.5
CDS-3UTR CCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACGCGGTGCCTAGGAACTaGGAGCGTAACTTGGCTCGG +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDAVPRN*ERNLAR
Trigger: CCGAGCCAAGTTACGCTCCCAGTTCCTAGGCACCGC...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317287.5
CDS-3UTR CCA 90 bp TACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTAAGAGTAAGGCCCTTCTaGAATTCCAGGTGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: YPVPTPKGIHCPAQVQALRVRPF*NSRCSL
Trigger: CAGGGAACACCTGGAATTCCAGAAGGGCCTTACTCT...TAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp CAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCATCTTCCCCCAAAGCTaGAGAGGTACAGTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: QGNTQFPHLKGYTVQPRSIFPQS*RGTVVA
Trigger: TGCCACCACTGTACCTCTCCAGCTTTGGGGGAAGAT...GGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACCCGCTGTCTCCGGGATaGGGGTTTCTTTCCGCTGGA +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDPLSPG*GFLSAG
Trigger: TCCAGCGGAAAGAAACCCCCATCCCGGAGACAGCGG...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp TACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTACAACATCTGATGCTGTaGCCTCAACCCCCAGTACAT +
Preference number: 4 (lower is better)
Translates to: YPVPTPKGIHCPAQVQALQHLML*PQPPVH
Trigger: ATGTACTGGGGGTTGAGGCCACAGCATCAGATGTTG...TAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACCTCTCTGCCGCCCTCTaGTGCCTGGAATCCGAGAAC +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDLSAAL*CLESEN
Trigger: GTTCTCGGATTCCAGGCACCAGAGGGCGGCAGAGAG...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp ATACAGACCCCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCACTCTCTGCCGCCCTCTaGTGCCTGGAATCCGAGAAC +
Preference number: 4 (lower is better)
Translates to: IQTPGKYPVPTPKGIHCPLSAAL*CLESEN
Trigger: GTTCTCGGATTCCAGGCACCAGAGGGCGGCAGAGAG...TGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGGGGTCTGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTCTCTCTGCCGCCCTCTaGTGCCTGGAATCCGAGAAC +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFLSAAL*CLESEN
Trigger: GTTCTCGGATTCCAGGCACCAGAGGGCGGCAGAGAG...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp CTAAAAGCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCGAGGGGCATCTGGGGTaGCTCTCTGCCGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LKANDKTKAYRPQGNTQFEGHLG*LSAALW
Trigger: CCAGAGGGCGGCAGAGAGCCACCCCAGATGCCCCTC...GAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGCTTTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp CAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCCAAAGAAGTTCCCATTaGGCATCTGCCCTGGGGGTA +
Preference number: 4 (lower is better)
Translates to: QGNTQFPHLKGYTVQPRSQRSSH*ASALGV
Trigger: TACCCCCAGGGCAGATGCCCAATGGGAACTTCTTTG...GGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp CCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCGTTTGGCTTCTCCCTTaGGTACTGTGCTGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: PGKYPVPTPKGIHCPAQVVWLLP*VLCCWA
Trigger: AGCCCAACAGCACAGTACCCAAGGGAGAAGCCAAAC...GACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp CCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCAAGGGGCATCAACGTTaGAAGGGCCTCCTCACTTTC +
Preference number: 4 (lower is better)
Translates to: PGKYPVPTPKGIHCPAQVKGHQR*KGLLTF
Trigger: GAAAGTGAGGAGGCCCTTCCAACGTTGATGCCCCTT...GACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AAATACAAACCCTTGGATCACATGGGGGCTTCTGGGAACCCCCGTATTCTTCCCGGGGGTCTCTGGTCCTaGACTAGAGCAGTAGGCAAC +
Preference number: 4 (lower is better)
Translates to: KYKPLDHMGASGNPRILPGGLWS*TRAVGN
Trigger: GTTGCCTACTGCTCTAGTCCAGGACCAGAGACCCCC...GGGAAGAATACGGGGGTTCCCAGAAGCCCCCATGTGATCCAAGGGTTTGTATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000357606.7
ENST00000547445.2
CDS-3UTR TCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACCATCATGGTGTGTTCTaGTGCCTGGATCCGCCCCTC +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDHHGVF*CLDPPL
Trigger: GAGGGGCGGATCCAGGCATCAGAACACACCATGATG...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000317287.5
CDS-3UTR TCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACAGGGTCCTAAAGTCCTaGGGGAGGCACCACCACTGT +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDRVLKS*GRHHHC
Trigger: ACAGTGGTGGTGCCTCCCTCAGGACTTTAGGACCCT...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp GCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCCCACACAGGGTCCTAAAGTCCTaGGGGAGGCACCACCACTGT +
Preference number: 4 (lower is better)
Translates to: ANDKTKAYRPQGNTQFPHRVLKS*GRHHHC
Trigger: ACAGTGGTGGTGCCTCCCTCAGGACTTTAGGACCCT...GTGTGGGAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp GAACCCCCGTATTCTTCCCCCTCACCCAAGGGCAGTGGGCATGAATCTACTTTTTCCCTGCTGAGTCCCTaGGTCCTGAGAATGAAGGTA +
Preference number: 4 (lower is better)
Translates to: EPPYSSPSPKGSGHESTFSLLSP*VLRMKV
Trigger: TACCTTCATTCTCAGGACTCAGGGACTCAGCAGGGA...AAAAGTAGATTCATGCCCACTGCCCTTGGGTGAGGGGGAAGAATACGGGGGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp GAACCCCCGTATTCTTCCCCCTCACCCAAGGGCAGTGGGCATGAATCTACTTTTGAAGACGTCTCACTCTaGTCAGGGTCCTCTGCATCT +
Preference number: 4 (lower is better)
Translates to: EPPYSSPSPKGSGHESTFEDVSL*SGSSAS
Trigger: AGATGCAGAGGACCCTGATCAGAGTGAGACGTCTTC...AAAAGTAGATTCATGCCCACTGCCCTTGGGTGAGGGGGAAGAATACGGGGGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp TACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTAAGTCTCGTTTTCTTTTaGGAGTTCCTGGTCCACTCC +
Preference number: 4 (lower is better)
Translates to: YPVPTPKGIHCPAQVQALSLVFF*EFLVHS
Trigger: GGAGTGGACCAGGAACTCTCAAAAGAAAACGAGACT...TAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACCCTGCCTGTCCAAGTTaGCATAGTTCCTCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDPACPS*HSSSAP
Trigger: GGGAGCCGAGGAACTATGTCAACTTGGACAGGCAGG...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp GAACCCCCGTATTCTTCCCCCTCACCCAAGGGCAGTGGGCATGAATCTACTTTTTTAGAAACTGAAACATaGCCTGGGCCCAGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: EPPYSSPSPKGSGHESTFLETET*PGPSPL
Trigger: TAGGGGGCTGGGCCCAGGTCATGTTTCAGTTTCTAA...AAAAGTAGATTCATGCCCACTGCCCTTGGGTGAGGGGGAAGAATACGGGGGTTC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp GAACCCCCGTATTCTTCCCCCTCACCCAAGGGCAGTGGGCATGAATCTACTTTTCTTCAGTTCAACATCTaGTGCTGTGGCCTCAACCCC +
Preference number: 4 (lower is better)
Translates to: EPPYSSPSPKGSGHESTFLQFNI*CCGLNP
Trigger: GGGGTTGAGGCCACAGCATCAGATGTTGAACTGAAG...AAAAGTAGATTCATGCCCACTGCCCTTGGGTGAGGGGGAAGAATACGGGGGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp TACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTACAGAAACTCATTTACTaGCCGGCTCAGCTCATTCTC +
Preference number: 4 (lower is better)
Translates to: YPVPTPKGIHCPAQVQALQKLIY*PAQLIL
Trigger: GAGAATGAGCTGAGCCGGTCAGTAAATGAGTTTCTG...TAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp TACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTAATCCAGCCCACTCTGTaGTGTCATACACCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: YPVPTPKGIHCPAQVQALIQPTL*CHTPFH
Trigger: ATGGAAAGGTGTATGACATCACAGAGTGGGCTGGAT...TAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp CAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCTGCCCTGGGGGTACTTaGAAGATCCGACTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: QGNTQFPHLKGYTVQPRSCPGGT*KIRLKK
Trigger: TTTCTTGAGTCGGATCTTTCAAGTACCCCCAGGGCA...GGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp TACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTATCCCTGACATTGATTTaGGGAAAGAGAAGGGGCATC +
Preference number: 4 (lower is better)
Translates to: YPVPTPKGIHCPAQVQALSLTLI*GKRRGI
Trigger: GATGCCCCTTCTCTTTCCTCAAATCAATGTCAGGGA...TAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp ACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTAGGTTCTTTACTCGATGGGAGAATTGCTTaGACCCGGGAGACAGAGGTT +
Preference number: 4 (lower is better)
Translates to: TPKGIHCPAQVQALGSLLDGRIA*TRETEV
Trigger: AACCTCTGTCTCCCGGGTTCAAGCAATTCTCCCATC...GAGTAAAGAACCTAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp CAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCACAATCCCAGGCCTTTaGGCTTATCTGCCTGACTTC +
Preference number: 4 (lower is better)
Translates to: QGNTQFPHLKGYTVQPRSTIPGL*AYLPDF
Trigger: GAAGTCAGGCAGATAAGCGCAAAGGCCTGGGATTGT...GGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACGCCGCTGCCATGGCCTaGTATCTCTCAGCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDAAAMA*YLSAES
Trigger: TGACTCTGCTGAGAGATAGCAGGCCATGGCAGCGGC...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp TACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTAAGGATGAACCATCACTaGCAGCTGTCTATAGGCCTT +
Preference number: 4 (lower is better)
Translates to: YPVPTPKGIHCPAQVQALRMNHH*QLSIGL
Trigger: AAGGCCTATAGACAGCTGGCAGTGATGGTTCATCCT...TAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp CCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCGACAATGTCCCAAGCTaGTCGCAAAACCTTGAAGGC +
Preference number: 4 (lower is better)
Translates to: PGKYPVPTPKGIHCPAQVDNVPS*SQNLEG
Trigger: GCCTTCAAGGTTTTGCGAGCAGCTTGGGACATTGTC...GACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp CAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCCCTTCCTCAGCAGGATaGAGCCTATTACACTCAGCA +
Preference number: 4 (lower is better)
Translates to: QGNTQFPHLKGYTVQPRSPSSAG*SLLHSA
Trigger: TGCTGAGTGTAATAGGCTGCATCCTGCTGAGGAAGG...GGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACTCTGCCGCCCTCTGGTaGCTGGAATCCGAGAACCAA +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDSAALW*LESENQ
Trigger: TTGGTTCTCGGATTCCAGGCACCAGAGGGCGGCAGA...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp GCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCCCACACTCTGCCGCCCTCTGGTaGCTGGAATCCGAGAACCAA +
Preference number: 4 (lower is better)
Translates to: ANDKTKAYRPQGNTQFPHSAALW*LESENQ
Trigger: TTGGTTCTCGGATTCCAGGCACCAGAGGGCGGCAGA...GTGTGGGAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp CTAAAAGCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCTCTGGGGTGGCTCTCTaGCGCCCTCTGGTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: LKANDKTKAYRPQGNTQFSGVAL*RPLVPG
Trigger: TCCAGGCACCAGAGGGCGGCAGAGAGCCACCCCAGA...GAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGCTTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp GAACCCCCGTATTCTTCCCCCTCACCCAAGGGCAGTGGGCATGAATCTACTTTTCCGGGAGACAGAGGTTaGAGTAAGCTGAGATCACAC +
Preference number: 4 (lower is better)
Translates to: EPPYSSPSPKGSGHESTFPGDRG*SKLRSH
Trigger: GTGTGATCTCAGCTTACTGCAACCTCTGTCTCCCGG...AAAAGTAGATTCATGCCCACTGCCCTTGGGTGAGGGGGAAGAATACGGGGGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AAATACAAACCCTTGGATCACATGGGGGCTTCTGGGAACCCCCGTATTCTTCCCGCACCACCACTGTGGTaGGCTCCATACAACCCTCTT +
Preference number: 4 (lower is better)
Translates to: KYKPLDHMGASGNPRILPAPPLW*APYNPL
Trigger: AAGAGGGTTGTATGGAGCCCACCACAGTGGTGGTGC...GGGAAGAATACGGGGGTTCCCAGAAGCCCCCATGTGATCCAAGGGTTTGTATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGAGGCACCACCACTGTaGTGGGCTCCATACAACCCT +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFEAPPL*WAPYNP
Trigger: AGGGTTGTATGGAGCCCACCACAGTGGTGGTGCCTC...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AAATACAAACCCTTGGATCACATGGGGGCTTCTGGGAACCCCCGTATTCTTCCCCCAATGGGCTGGGTTTaGGTGCTGTGTGTGCTTAGG +
Preference number: 4 (lower is better)
Translates to: KYKPLDHMGASGNPRILPPMGWV*VLCVLR
Trigger: CCTAAGCACACACAGCACCCAAACCCAGCCCATTGG...GGGAAGAATACGGGGGTTCCCAGAAGCCCCCATGTGATCCAAGGGTTTGTATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AAATACAAACCCTTGGATCACATGGGGGCTTCTGGGAACCCCCGTATTCTTCCCGTCCAACCAATGGGCTaGGTTTGGGTGCTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: KYKPLDHMGASGNPRILPVQPMG*VWVLCV
Trigger: CACACACAGCACCCAAACCCAGCCCATTGGTTGGAC...GGGAAGAATACGGGGGTTCCCAGAAGCCCCCATGTGATCCAAGGGTTTGTATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp CAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCATTCCAGGTGTTCCCTaGCAGTTGCAAGCAGATGGA +
Preference number: 4 (lower is better)
Translates to: QGNTQFPHLKGYTVQPRSIPGVP*QLQADG
Trigger: TCCATCTGCTTGCAACTGCCAGGGAACACCTGGAAT...GGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp CCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCATTCCAGGTGTTCCCTaGCAGTTGCAAGCAGATGGA +
Preference number: 4 (lower is better)
Translates to: PGKYPVPTPKGIHCPAQVIPGVP*QLQADG
Trigger: TCCATCTGCTTGCAACTGCCAGGGAACACCTGGAAT...GACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp CAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGAGTAAGGCCCTTCTaGAATTCCAGGTGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: QGNTQFPHLKGYTVQPRSRVRPF*NSRCSL
Trigger: CAGGGAACACCTGGAATTCCAGAAGGGCCTTACTCT...GGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp TACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTAGCTGGAGAGGTACAGTaGTGGCAAAAGTTGCTAGAA +
Preference number: 4 (lower is better)
Translates to: YPVPTPKGIHCPAQVQALAGEVQ*WQKLLE
Trigger: TTCTAGCAACTTTTGCCACCACTGTACCTCTCCAGC...TAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp TACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTAGGGGTTTCTTTCCGCTaGACACACGTGAAAAATCAC +
Preference number: 4 (lower is better)
Translates to: YPVPTPKGIHCPAQVQALGVSFR*THVKNH
Trigger: GTGATTTTTCACGTGTGTCCAGCGGAAAGAAACCCC...TAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACTACCAGCCGCTGCCATaGCCTGCTATCTCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDYQPLP*PAISQQ
Trigger: CTGCTGAGAGATAGCAGGCCATGGCAGCGGCTGGTA...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp ATACAGACCCCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCATACCAGCCGCTGCCATaGCCTGCTATCTCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: IQTPGKYPVPTPKGIHCPYQPLP*PAISQQ
Trigger: CTGCTGAGAGATAGCAGGCCATGGCAGCGGCTGGTA...TGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGGGGTCTGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp ACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTAGGTTCTTTACTCCTCAGGAGGCTGAGATaGGAGAATTGCTTGAACCCG +
Preference number: 4 (lower is better)
Translates to: TPKGIHCPAQVQALGSLLLRRLR*ENCLNP
Trigger: CGGGTTCAAGCAATTCTCCCATCTCAGCCTCCTGAG...GAGTAAAGAACCTAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp GAACCCCCGTATTCTTCCCCCTCACCCAAGGGCAGTGGGCATGAATCTACTTTTCTCAGGAGGCTGAGATaGGAGAATTGCTTGAACCCG +
Preference number: 4 (lower is better)
Translates to: EPPYSSPSPKGSGHESTFLRRLR*ENCLNP
Trigger: CGGGTTCAAGCAATTCTCCCATCTCAGCCTCCTGAG...AAAAGTAGATTCATGCCCACTGCCCTTGGGTGAGGGGGAAGAATACGGGGGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp GAACCCCCGTATTCTTCCCCCTCACCCAAGGGCAGTGGGCATGAATCTACTTTTCACACGGGAAAGAATTaGAGGGGCCTGCCTTGTGAT +
Preference number: 4 (lower is better)
Translates to: EPPYSSPSPKGSGHESTFHTGKN*RGLPCD
Trigger: ATCACAAGGCAGGCCCCTCCAATTCTTTCCCGTGTG...AAAAGTAGATTCATGCCCACTGCCCTTGGGTGAGGGGGAAGAATACGGGGGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000547445.2
CDS-3UTR TCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTAAGTTTTTCCACCCATaGACCCCCAGTTGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFKFFHP*TPSWRS
Trigger: GGAGCGCCAACTGGGGGTTCATGGGTGGAAAAACTT...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000317287.5
CDS-3UTR TCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACTTGCGCTTATCTGCCTaGCTTCGTTTCCGACCCAGC +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDLRLSA*LRFRPS
Trigger: GCTGGGTCGGAAACGAAGTCAGGCAGATAAGCGCAA...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp GCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCCCACACTTGCGCTTATCTGCCTaGCTTCGTTTCCGACCCAGC +
Preference number: 4 (lower is better)
Translates to: ANDKTKAYRPQGNTQFPHLRLSA*LRFRPS
Trigger: GCTGGGTCGGAAACGAAGTCAGGCAGATAAGCGCAA...GTGTGGGAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp ACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTAGGTTCTTTACTCGCCTGCAGGCATAGATaGGATGGCCACAAGTTTCTA +
Preference number: 4 (lower is better)
Translates to: TPKGIHCPAQVQALGSLLACRHR*DGHKFL
Trigger: TAGAAACTTGTGGCCATCTCATCTATGCCTGCAGGC...GAGTAAAGAACCTAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp CCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCTATTCATTGCCTCCTTaGGGTCATCTTGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: PGKYPVPTPKGIHCPAQVYSLPP*GHLAAW
Trigger: CCAAGCTGCAAGATGACCTCAAGGAGGCAATGAATA...GACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp CAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCATCCAGCCCACTCTGTaGTGTCATACACCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: QGNTQFPHLKGYTVQPRSIQPTL*CHTPFH
Trigger: ATGGAAAGGTGTATGACATCACAGAGTGGGCTGGAT...GGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp CCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCTCCCTGACATTGATTTaGGGAAAGAGAAGGGGCATC +
Preference number: 4 (lower is better)
Translates to: PGKYPVPTPKGIHCPAQVSLTLI*GKRRGI
Trigger: GATGCCCCTTCTCTTTCCTCAAATCAATGTCAGGGA...GACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp CTAAAAGCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCCCTCTTTCTCCGGGGTaGTTCTGGGCCATGACCCCG +
Preference number: 4 (lower is better)
Translates to: LKANDKTKAYRPQGNTQFPLSPG*FWAMTP
Trigger: CGGGGTCATGGCCCAGAAGCACCCCGGAGAAAGAGG...GAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGCTTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTTGGGCTGGGTTTGGGTaGTGTGTGTGCTTAGGACCA +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFWAGFG*CVCLGP
Trigger: TGGTCCTAAGCACACACAGCACCCAAACCCAGCCCA...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACCTGATCAGGGTCCTCTaGATCTCTAGGTGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDLIRVL*ISRWSW
Trigger: CCAGGACCACCTAGAGATGCAGAGGACCCTGATCAG...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTCTGATCAGGGTCCTCTaGATCTCTAGGTGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFLIRVL*ISRWSW
Trigger: CCAGGACCACCTAGAGATGCAGAGGACCCTGATCAG...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp CAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGATGAACCATCACTaGCAGCTGTCTATAGGCCTT +
Preference number: 4 (lower is better)
Translates to: QGNTQFPHLKGYTVQPRSRMNHH*QLSIGL
Trigger: AAGGCCTATAGACAGCTGGCAGTGATGGTTCATCCT...GGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp ACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTAGGTTCTTTACTCCCTTCCTCAGCAGGATaGAGCCTATTACACTCAGCA +
Preference number: 4 (lower is better)
Translates to: TPKGIHCPAQVQALGSLLPSSAG*SLLHSA
Trigger: TGCTGAGTGTAATAGGCTGCATCCTGCTGAGGAAGG...GAGTAAAGAACCTAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp CAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCTCAAACTCCATCCTGTaGTACAGCCCTTTTGACTCC +
Preference number: 4 (lower is better)
Translates to: QGNTQFPHLKGYTVQPRSSNSIL*YSPFDS
Trigger: GGAGTCAAAAGGGCTGTAGCACAGGATGGAGTTTGA...GGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp GAACCCCCGTATTCTTCCCCCTCACCCAAGGGCAGTGGGCATGAATCTACTTTTCTGAGATGGGAGAATTaGTTGAACCCGGGAGACAGA +
Preference number: 4 (lower is better)
Translates to: EPPYSSPSPKGSGHESTFLRWEN*LNPGDR
Trigger: TCTGTCTCCCGGGTTCAAGCAATTCTCCCATCTCAG...AAAAGTAGATTCATGCCCACTGCCCTTGGGTGAGGGGGAAGAATACGGGGGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp ACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTAGGTTCTTTACTCTGGGCCTACTTCCACTaGTATATAGTTGGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: TPKGIHCPAQVQALGSLLWAYFH*YIVGGL
Trigger: GAGACCCCCAACTATATAGCAGTGGAAGTAGGCCCA...GAGTAAAGAACCTAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357606.7
CDS-3UTR CCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACTACCAAGCTATTTGGTaGACGTCCACAAGCGCCCCC +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDYQAIW*TSTSAP
Trigger: GGGGGCGCTTGTGGACGTCCACCAAATAGCTTGGTA...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317287.5
CDS-3UTR CCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGCACCACCACTGTGGTaGGCTCCATACAACCCTCTT +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFAPPLW*APYNPL
Trigger: AAGAGGGTTGTATGGAGCCCACCACAGTGGTGGTGC...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp ATACAGACCCCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCACCACCACTGTGGTaGGCTCCATACAACCCTCTT +
Preference number: 4 (lower is better)
Translates to: IQTPGKYPVPTPKGIHCPAPPLW*APYNPL
Trigger: AAGAGGGTTGTATGGAGCCCACCACAGTGGTGGTGC...TGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGGGGTCTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACCCAATGGGCTGGGTTTaGGTGCTGTGTGTGCTTAGG +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDPMGWV*VLCVLR
Trigger: CCTAAGCACACACAGCACCCAAACCCAGCCCATTGG...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGTCCAACCAATGGGCTaGGTTTGGGTGCTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFVQPMG*VWVLCV
Trigger: CACACACAGCACCCAAACCCAGCCCATTGGTTGGAC...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACGTCCAACCAATGGGCTaGGTTTGGGTGCTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDVQPMG*VWVLCV
Trigger: CACACACAGCACCCAAACCCAGCCCATTGGTTGGAC...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTCTTGGGTCCAACCAATaGGCTGGGTTTGGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFLGSNQ*AGFGCC
Trigger: ACAGCACCCAAACCCAGCCCATTGGTTGGACCCAAG...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACCTTGGGTCCAACCAATaGGCTGGGTTTGGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDLGSNQ*AGFGCC
Trigger: ACAGCACCCAAACCCAGCCCATTGGTTGGACCCAAG...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp CTAAAAGCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCCTCTGCATCTCTAGGTaGTCCTGGACCCCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LKANDKTKAYRPQGNTQFLCISR*SWTPWG
Trigger: CCCCCAGGGGGTCCAGGACCACCTAGAGATGCAGAG...GAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGCTTTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp CCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCGAGTTCCCATCCTTCTaGTTCCCAGTCTCGTTTTCT +
Preference number: 4 (lower is better)
Translates to: PGKYPVPTPKGIHCPAQVEFPSF*FPVSFS
Trigger: AGAAAACGAGACTGGGAACCAGAAGGATGGGAACTC...GACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp GAACCCCCGTATTCTTCCCCCTCACCCAAGGGCAGTGGGCATGAATCTACTTTTATTCCAGGTGTTCCCTaGCAGTTGCAAGCAGATGGA +
Preference number: 4 (lower is better)
Translates to: EPPYSSPSPKGSGHESTFIPGVP*QLQADG
Trigger: TCCATCTGCTTGCAACTGCCAGGGAACACCTGGAAT...AAAAGTAGATTCATGCCCACTGCCCTTGGGTGAGGGGGAAGAATACGGGGGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp ACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTAGGTTCTTTACTCAGAGTAAGGCCCTTCTaGAATTCCAGGTGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: TPKGIHCPAQVQALGSLLRVRPF*NSRCSL
Trigger: CAGGGAACACCTGGAATTCCAGAAGGGCCTTACTCT...GAGTAAAGAACCTAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp CCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCGCTGGAGAGGTACAGTaGTGGCAAAAGTTGCTAGAA +
Preference number: 4 (lower is better)
Translates to: PGKYPVPTPKGIHCPAQVAGEVQ*WQKLLE
Trigger: TTCTAGCAACTTTTGCCACCACTGTACCTCTCCAGC...GACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AAATACAAACCCTTGGATCACATGGGGGCTTCTGGGAACCCCCGTATTCTTCCCGCAACGCTGCAAGGCTaGAGAATCCAGCCAAGAGAA +
Preference number: 4 (lower is better)
Translates to: KYKPLDHMGASGNPRILPATLQG*RIQPRE
Trigger: TTCTCTTGGCTGGATTCTCCAGCCTTGCAGCGTTGC...GGGAAGAATACGGGGGTTCCCAGAAGCCCCCATGTGATCCAAGGGTTTGTATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTCAGGAACCCCAGCCATaGTCAAGAGTCGAGCCACTT +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFQEPQP*SRVEPL
Trigger: AAGTGGCTCGACTCTTGACCATGGCTGGGGTTCCTG...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACCAGGAACCCCAGCCATaGTCAAGAGTCGAGCCACTT +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDQEPQP*SRVEPL
Trigger: AAGTGGCTCGACTCTTGACCATGGCTGGGGTTCCTG...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp GCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCCCACACCAGGAACCCCAGCCATaGTCAAGAGTCGAGCCACTT +
Preference number: 4 (lower is better)
Translates to: ANDKTKAYRPQGNTQFPHQEPQP*SRVEPL
Trigger: AAGTGGCTCGACTCTTGACCATGGCTGGGGTTCCTG...GTGTGGGAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp CAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCTCAACCCCCAGTACATaGAAAGGGTTTAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: QGNTQFPHLKGYTVQPRSSTPST*KGFSSS
Trigger: GGATGAGCTAAACCCTTTCCATGTACTGGGGGTTGA...GGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp ACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTAGGTTCTTTACTCCAACATCTGATGCTGTaGCCTCAACCCCCAGTACAT +
Preference number: 4 (lower is better)
Translates to: TPKGIHCPAQVQALGSLLQHLML*PQPPVH
Trigger: ATGTACTGGGGGTTGAGGCCACAGCATCAGATGTTG...GAGTAAAGAACCTAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACGAGATACCTACACGCTaGCATCCAGCCCACTCTGTG +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDEIPTR*HPAHSV
Trigger: CACAGAGTGGGCTGGATGCCAGCGTGTAGGTATCTC...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp ATACAGACCCCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGAGATACCTACACGCTaGCATCCAGCCCACTCTGTG +
Preference number: 4 (lower is better)
Translates to: IQTPGKYPVPTPKGIHCPEIPTR*HPAHSV
Trigger: CACAGAGTGGGCTGGATGCCAGCGTGTAGGTATCTC...TGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGGGGTCTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AAATACAAACCCTTGGATCACATGGGGGCTTCTGGGAACCCCCGTATTCTTCCCGACTCTGTGGGTATCTaGGGAGATACCTACACGCTG +
Preference number: 4 (lower is better)
Translates to: KYKPLDHMGASGNPRILPDSVGI*GDTYTL
Trigger: CAGCGTGTAGGTATCTCCCCAGATACCCACAGAGTC...GGGAAGAATACGGGGGTTCCCAGAAGCCCCCATGTGATCCAAGGGTTTGTATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AAATACAAACCCTTGGATCACATGGGGGCTTCTGGGAACCCCCGTATTCTTCCCGTTTGGCTTCTCCCTTaGGTACTGTGCTGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: KYKPLDHMGASGNPRILPVWLLP*VLCCWA
Trigger: AGCCCAACAGCACAGTACCCAAGGGAGAAGCCAAAC...GGGAAGAATACGGGGGTTCCCAGAAGCCCCCATGTGATCCAAGGGTTTGTATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AAATACAAACCCTTGGATCACATGGGGGCTTCTGGGAACCCCCGTATTCTTCCCAAGGGGCATCAACGTTaGAAGGGCCTCCTCACTTTC +
Preference number: 4 (lower is better)
Translates to: KYKPLDHMGASGNPRILPKGHQR*KGLLTF
Trigger: GAAAGTGAGGAGGCCCTTCCAACGTTGATGCCCCTT...GGGAAGAATACGGGGGTTCCCAGAAGCCCCCATGTGATCCAAGGGTTTGTATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACTCACATGGGGGCTTCTaGGAACCCCCGTATTCTTCC +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDSHGGF*EPPYSS
Trigger: GGAAGAATACGGGGGTTCCCAGAAGCCCCCATGTGA...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTTCCCTGCTGAGTCCCTaGGTCCTGAGAATGAAGGTA +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFSLLSP*VLRMKV
Trigger: TACCTTCATTCTCAGGACTCAGGGACTCAGCAGGGA...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACTCCCTGCTGAGTCCCTaGGTCCTGAGAATGAAGGTA +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDSLLSP*VLRMKV
Trigger: TACCTTCATTCTCAGGACTCAGGGACTCAGCAGGGA...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACGAAGACGTCTCACTCTaGTCAGGGTCCTCTGCATCT +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDEDVSL*SGSSAS
Trigger: AGATGCAGAGGACCCTGATCAGAGTGAGACGTCTTC...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp ATACAGACCCCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGAAGACGTCTCACTCTaGTCAGGGTCCTCTGCATCT +
Preference number: 4 (lower is better)
Translates to: IQTPGKYPVPTPKGIHCPEDVSL*SGSSAS
Trigger: AGATGCAGAGGACCCTGATCAGAGTGAGACGTCTTC...TGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGGGGTCTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTTTAGAAACTGAAACATaGCCTGGGCCCAGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFLETET*PGPSPL
Trigger: TAGGGGGCTGGGCCCAGGTCATGTTTCAGTTTCTAA...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACTTAGAAACTGAAACATaGCCTGGGCCCAGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDLETET*PGPSPL
Trigger: TAGGGGGCTGGGCCCAGGTCATGTTTCAGTTTCTAA...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp ATACAGACCCCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCATTAGAAACTGAAACATaGCCTGGGCCCAGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: IQTPGKYPVPTPKGIHCPLETET*PGPSPL
Trigger: TAGGGGGCTGGGCCCAGGTCATGTTTCAGTTTCTAA...TGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGGGGTCTGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACCTTCAGTTCAACATCTaGTGCTGTGGCCTCAACCCC +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDLQFNI*CCGLNP
Trigger: GGGGTTGAGGCCACAGCATCAGATGTTGAACTGAAG...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp GAACCCCCGTATTCTTCCCCCTCACCCAAGGGCAGTGGGCATGAATCTACTTTTATCCAGCCCACTCTGTaGTGTCATACACCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: EPPYSSPSPKGSGHESTFIQPTL*CHTPFH
Trigger: ATGGAAAGGTGTATGACATCACAGAGTGGGCTGGAT...AAAAGTAGATTCATGCCCACTGCCCTTGGGTGAGGGGGAAGAATACGGGGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACCGACTCAAGAAATCCTaGAGATCAGCAGGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDRLKKS*RSAGGA
Trigger: TGCCCCTCCTGCTGATCTTCAGGATTTCTTGAGTCG...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTCGACTCAAGAAATCCTaGAGATCAGCAGGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFRLKKS*RSAGGA
Trigger: TGCCCCTCCTGCTGATCTTCAGGATTTCTTGAGTCG...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGATGGGAGAATTGCTTaGACCCGGGAGACAGAGGTT +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFDGRIA*TRETEV
Trigger: AACCTCTGTCTCCCGGGTTCAAGCAATTCTCCCATC...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp GCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCCCACACGAGAGGGCTCCCTCCTaGAATGGGTCAAGAAAGAAG +
Preference number: 4 (lower is better)
Translates to: ANDKTKAYRPQGNTQFPHERAPS*NGSRKK
Trigger: CTTCTTTCTTGACCCATTTCAGGAGGGAGCCCTCTC...GTGTGGGAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp CCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCATCATGGTGTGTTCTaGTGCCTGCTATATAGTTGG +
Preference number: 4 (lower is better)
Translates to: PGKYPVPTPKGIHCPAQVHHGVF*CLLYSW
Trigger: CCAACTATATAGCAGGCATCAGAACACACCATGATG...GACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547445.2
CDS-3UTR GCA 90 bp CTAAAAGCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCTTCGTTGGAAAGCGGTaGCGCTGTCTCCGGGATGGG +
Preference number: 4 (lower is better)
Translates to: LKANDKTKAYRPQGNTQFFVGKR*RCLRDG
Trigger: CCCATCCCGGAGACAGCGGCACCGCTTTCCAACGAA...GAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGCTTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGCCTTTGCGCTTATCTaGCTGACTTCGTTTCCGACC +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFAFALI*LTSFPT
Trigger: GGTCGGAAACGAAGTCAGGCAGATAAGCGCAAAGGC...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp GCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCCCACACGCCTTTGCGCTTATCTaGCTGACTTCGTTTCCGACC +
Preference number: 4 (lower is better)
Translates to: ANDKTKAYRPQGNTQFPHAFALI*LTSFPT
Trigger: GGTCGGAAACGAAGTCAGGCAGATAAGCGCAAAGGC...GTGTGGGAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp ATACAGACCCCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCTTTGCGCTTATCTaGCTGACTTCGTTTCCGACC +
Preference number: 4 (lower is better)
Translates to: IQTPGKYPVPTPKGIHCPAFALI*LTSFPT
Trigger: GGTCGGAAACGAAGTCAGGCAGATAAGCGCAAAGGC...TGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGGGGTCTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTAGAGTCAAGCAACGCTaGAAGGCTGGAGAATCCAGC +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFRVKQR*KAGESS
Trigger: GCTGGATTCTCCAGCCTTGCAGCGTTGCTTGACTCT...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp GCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCCCACACAGAGTCAAGCAACGCTaGAAGGCTGGAGAATCCAGC +
Preference number: 4 (lower is better)
Translates to: ANDKTKAYRPQGNTQFPHRVKQR*KAGESS
Trigger: GCTGGATTCTCCAGCCTTGCAGCGTTGCTTGACTCT...GTGTGGGAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp TACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTAACAGGTGCATTCCCCTaGCTATTAATATTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: YPVPTPKGIHCPAQVQALTGAFP*LLIFCL
Trigger: CAAGCAGAATATTAATAGGCAGGGGAATGCACCTGT...TAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp ACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTAGGTTCTTTACTCCCCACTAGCTACAGGTaGATTCCCCTGCCTATTAAT +
Preference number: 4 (lower is better)
Translates to: TPKGIHCPAQVQALGSLLPTSYR*IPLPIN
Trigger: ATTAATAGGCAGGGGAATGCACCTGTAGCTAGTGGG...GAGTAAAGAACCTAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp CCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCTCCTTGAGGTCATCTTaGAGCTTGGACAGAAACTCA +
Preference number: 4 (lower is better)
Translates to: PGKYPVPTPKGIHCPAQVSLRSS*SLDRNS
Trigger: TGAGTTTCTGTCCAAGCTGCAAGATGACCTCAAGGA...GACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp TACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTACTTTCCATCCATCAGTaGAAAGTAGGTGATCTTGAG +
Preference number: 4 (lower is better)
Translates to: YPVPTPKGIHCPAQVQALLSIHQ*KVGDLE
Trigger: CTCAAGATCACCTACTTTGCACTGATGGATGGAAAG...TAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp ACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTAGGTTCTTTACTCTCAAACTCCATCCTGTaGTACAGCCCTTTTGACTCC +
Preference number: 4 (lower is better)
Translates to: TPKGIHCPAQVQALGSLLSNSIL*YSPFDS
Trigger: GGAGTCAAAAGGGCTGTAGCACAGGATGGAGTTTGA...GAGTAAAGAACCTAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTCCGGGAGACAGAGGTTaGAGTAAGCTGAGATCACAC +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFPGDRG*SKLRSH
Trigger: GTGTGATCTCAGCTTACTGCAACCTCTGTCTCCCGG...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACGCATACCAAGCTATTTaGTGGACGTCCACAAGCGCC +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDAYQAI*WTSTSA
Trigger: GGCGCTTGTGGACGTCCACCAAATAGCTTGGTATGC...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317287.5
CDS-3UTR CCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTACTGGGAGCGTAACTTaGCTCGGCTCAGAACTTTGC +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFTGSVT*LGSELC
Trigger: GCAAAGTTCTGAGCCGAGCCAAGTTACGCTCCCAGT...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317287.5
CDS-3UTR CCA 90 bp GAACCCCCGTATTCTTCCCCCTCACCCAAGGGCAGTGGGCATGAATCTACTTTTGAGTTCCCATCCTTCTaGTTCCCAGTCTCGTTTTCT +
Preference number: 4 (lower is better)
Translates to: EPPYSSPSPKGSGHESTFEFPSF*FPVSFS
Trigger: AGAAAACGAGACTGGGAACCAGAAGGATGGGAACTC...AAAAGTAGATTCATGCCCACTGCCCTTGGGTGAGGGGGAAGAATACGGGGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AAATACAAACCCTTGGATCACATGGGGGCTTCTGGGAACCCCCGTATTCTTCCCATTCCAGGTGTTCCCTaGCAGTTGCAAGCAGATGGA +
Preference number: 4 (lower is better)
Translates to: KYKPLDHMGASGNPRILPIPGVP*QLQADG
Trigger: TCCATCTGCTTGCAACTGCCAGGGAACACCTGGAAT...GGGAAGAATACGGGGGTTCCCAGAAGCCCCCATGTGATCCAAGGGTTTGTATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTATCTTCCCCCAAAGCTaGAGAGGTACAGTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFIFPQS*RGTVVA
Trigger: TGCCACCACTGTACCTCTCCAGCTTTGGGGGAAGAT...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACATCTTCCCCCAAAGCTaGAGAGGTACAGTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDIFPQS*RGTVVA
Trigger: TGCCACCACTGTACCTCTCCAGCTTTGGGGGAAGAT...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp GAACCCCCGTATTCTTCCCCCTCACCCAAGGGCAGTGGGCATGAATCTACTTTTGGGGTTTCTTTCCGCTaGACACACGTGAAAAATCAC +
Preference number: 4 (lower is better)
Translates to: EPPYSSPSPKGSGHESTFGVSFR*THVKNH
Trigger: GTGATTTTTCACGTGTGTCCAGCGGAAAGAAACCCC...AAAAGTAGATTCATGCCCACTGCCCTTGGGTGAGGGGGAAGAATACGGGGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACAGTATCCTCCTTCGTTaGAAAGCGGTGCCGCTGTCT +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDSILLR*KAVPLS
Trigger: AGACAGCGGCACCGCTTTCCAACGAAGGAGGATACT...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp GCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCCCACACAGTATCCTCCTTCGTTaGAAAGCGGTGCCGCTGTCT +
Preference number: 4 (lower is better)
Translates to: ANDKTKAYRPQGNTQFPHSILLR*KAVPLS
Trigger: AGACAGCGGCACCGCTTTCCAACGAAGGAGGATACT...GTGTGGGAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp ATACAGACCCCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAAGTATCCTCCTTCGTTaGAAAGCGGTGCCGCTGTCT +
Preference number: 4 (lower is better)
Translates to: IQTPGKYPVPTPKGIHCPSILLR*KAVPLS
Trigger: AGACAGCGGCACCGCTTTCCAACGAAGGAGGATACT...TGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGGGGTCTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGCAACGCTGCAAGGCTaGAGAATCCAGCCAAGAGAA +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFATLQG*RIQPRE
Trigger: TTCTCTTGGCTGGATTCTCCAGCCTTGCAGCGTTGC...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACGCAACGCTGCAAGGCTaGAGAATCCAGCCAAGAGAA +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDATLQG*RIQPRE
Trigger: TTCTCTTGGCTGGATTCTCCAGCCTTGCAGCGTTGC...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp GCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCCCACACGCAACGCTGCAAGGCTaGAGAATCCAGCCAAGAGAA +
Preference number: 4 (lower is better)
Translates to: ANDKTKAYRPQGNTQFPHATLQG*RIQPRE
Trigger: TTCTCTTGGCTGGATTCTCCAGCCTTGCAGCGTTGC...GTGTGGGAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp CAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCCTCCTATGCTTTCCTTaGCATCGGCTACACATCATA +
Preference number: 4 (lower is better)
Translates to: QGNTQFPHLKGYTVQPRSLLCFP*HRLHII
Trigger: TATGATGTGTAGCCGATGCCAAGGAAAGCATAGGAG...GGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACTCTGTGGGTATCTaGGGAGATACCTACACGCTG +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFDSVGI*GDTYTL
Trigger: CAGCGTGTAGGTATCTCCCCAGATACCCACAGAGTC...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp GCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCCCACACGACTCTGTGGGTATCTaGGGAGATACCTACACGCTG +
Preference number: 4 (lower is better)
Translates to: ANDKTKAYRPQGNTQFPHDSVGI*GDTYTL
Trigger: CAGCGTGTAGGTATCTCCCCAGATACCCACAGAGTC...GTGTGGGAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACATTGGGCATCTGCCCTaGGGGTACTTGAAAGATCCG +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDIGHLP*GYLKDP
Trigger: CGGATCTTTCAAGTACCCCCAGGGCAGATGCCCAAT...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTATTGGGCATCTGCCCTaGGGGTACTTGAAAGATCCG +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFIGHLP*GYLKDP
Trigger: CGGATCTTTCAAGTACCCCCAGGGCAGATGCCCAAT...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp GCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCCCACACATTGGGCATCTGCCCTaGGGGTACTTGAAAGATCCG +
Preference number: 4 (lower is better)
Translates to: ANDKTKAYRPQGNTQFPHIGHLP*GYLKDP
Trigger: CGGATCTTTCAAGTACCCCCAGGGCAGATGCCCAAT...GTGTGGGAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACCAAAGAAGTTCCCATTaGGCATCTGCCCTGGGGGTA +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDQRSSH*ASALGV
Trigger: TACCCCCAGGGCAGATGCCCAATGGGAACTTCTTTG...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACGTTTGGCTTCTCCCTTaGGTACTGTGCTGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDVWLLP*VLCCWA
Trigger: AGCCCAACAGCACAGTACCCAAGGGAGAAGCCAAAC...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACAAGGGGCATCAACGTTaGAAGGGCCTCCTCACTTTC +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDKGHQR*KGLLTF
Trigger: GAAAGTGAGGAGGCCCTTCCAACGTTGATGCCCCTT...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp ACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTAGGTTCTTTACTCTCAGTTCCTAGGTGTTaGGGGAGGAGGGATAAATCA +
Preference number: 4 (lower is better)
Translates to: TPKGIHCPAQVQALGSLLSVPRC*GRRDKS
Trigger: TGATTTATCCCTCCTCCCCCAACACCTAGGAACTGA...GAGTAAAGAACCTAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp ATACAGACCCCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCATGCCTGCTATATAGTTaGGGGTCTCTGGTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: IQTPGKYPVPTPKGIHCPCLLYS*GSLVLD
Trigger: GTCCAGGACCAGAGACCCCCAACTATATAGCAGGCA...TGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGGGGTCTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547445.2
CDS-3UTR TCA 90 bp AAATACAAACCCTTGGATCACATGGGGGCTTCTGGGAACCCCCGTATTCTTCCCAGTCTCGTTTTCTTTTaGGAGTTCCTGGTCCACTCC +
Preference number: 4 (lower is better)
Translates to: KYKPLDHMGASGNPRILPSLVFF*EFLVHS
Trigger: GGAGTGGACCAGGAACTCTCAAAAGAAAACGAGACT...GGGAAGAATACGGGGGTTCCCAGAAGCCCCCATGTGATCCAAGGGTTTGTATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp TACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTAAATCACTGGGGAACTTaGGAGATTCTTCATCATCAT +
Preference number: 4 (lower is better)
Translates to: YPVPTPKGIHCPAQVQALNHWGT*EILHHH
Trigger: ATGATGATGAAGAATCTCTCAAGTTCCCCAGTGATT...TAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACGCCTGCAGGCATAGATaGGATGGCCACAAGTTTCTA +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDACRHR*DGHKFL
Trigger: TAGAAACTTGTGGCCATCTCATCTATGCCTGCAGGC...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGCCTGCAGGCATAGATaGGATGGCCACAAGTTTCTA +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFACRHR*DGHKFL
Trigger: TAGAAACTTGTGGCCATCTCATCTATGCCTGCAGGC...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp GCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCCCACACGCCTGCAGGCATAGATaGGATGGCCACAAGTTTCTA +
Preference number: 4 (lower is better)
Translates to: ANDKTKAYRPQGNTQFPHACRHR*DGHKFL
Trigger: TAGAAACTTGTGGCCATCTCATCTATGCCTGCAGGC...GTGTGGGAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp AAATACAAACCCTTGGATCACATGGGGGCTTCTGGGAACCCCCGTATTCTTCCCCAGAAACTCATTTACTaGCCGGCTCAGCTCATTCTC +
Preference number: 4 (lower is better)
Translates to: KYKPLDHMGASGNPRILPQKLIY*PAQLIL
Trigger: GAGAATGAGCTGAGCCGGTCAGTAAATGAGTTTCTG...GGGAAGAATACGGGGGTTCCCAGAAGCCCCCATGTGATCCAAGGGTTTGTATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp ACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTAGGTTCTTTACTCAATCCGAGAACCAAATaGGATGTGATAGGGGACTCT +
Preference number: 4 (lower is better)
Translates to: TPKGIHCPAQVQALGSLLNPRTK*DVIGDS
Trigger: AGAGTCCCCTATCACATCTCATTTGGTTCTCGGATT...GAGTAAAGAACCTAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACTGCCCTGGGGGTACTTaGAAGATCCGACTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDCPGGT*KIRLKK
Trigger: TTTCTTGAGTCGGATCTTTCAAGTACCCCCAGGGCA...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp GCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCCCACACTGCCCTGGGGGTACTTaGAAGATCCGACTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: ANDKTKAYRPQGNTQFPHCPGGT*KIRLKK
Trigger: TTTCTTGAGTCGGATCTTTCAAGTACCCCCAGGGCA...GTGTGGGAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTTGCCCTGGGGGTACTTaGAAGATCCGACTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFCPGGT*KIRLKK
Trigger: TTTCTTGAGTCGGATCTTTCAAGTACCCCCAGGGCA...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp CCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCTCAGTTTCCAGTCTCTaGACTCTATGCGATAATCTC +
Preference number: 4 (lower is better)
Translates to: PGKYPVPTPKGIHCPAQVSVSSL*TLCDNL
Trigger: GAGATTATCGCATAGAGTTCAGAGACTGGAAACTGA...GACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACTTTGGGTGCTGTGTGTaGTTAGGACCAGAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDFGCCV*LGPECS
Trigger: AGAGCACTCTGGTCCTAAGCACACACAGCACCCAAA...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp GCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCCCACACTTTGGGTGCTGTGTGTaGTTAGGACCAGAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: ANDKTKAYRPQGNTQFPHFGCCV*LGPECS
Trigger: AGAGCACTCTGGTCCTAAGCACACACAGCACCCAAA...GTGTGGGAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTTTTGGGTGCTGTGTGTaGTTAGGACCAGAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFFGCCV*LGPECS
Trigger: AGAGCACTCTGGTCCTAAGCACACACAGCACCCAAA...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
50% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp CTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATTCAGGCCGGGCACTGATCAGGGTCCTCTaGATCTCTAGGTGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: LATPYFFGIVKRQDSGRALIRVL*ISRWSW
Trigger: CCAGGACCACCTAGAGATGCAGAGGACCCTGATCAG...TGCCCGGCCTGAATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACACAATCCCAGGCCTTTaGGCTTATCTGCCTGACTTC +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDTIPGL*AYLPDF
Trigger: GAAGTCAGGCAGATAAGCGCAAAGGCCTGGGATTGT...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp CTAAAAGCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCGCCGCTGCCATGGCCTaGTATCTCTCAGCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: LKANDKTKAYRPQGNTQFAAAMA*YLSAES
Trigger: TGACTCTGCTGAGAGATAGCAGGCCATGGCAGCGGC...GAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGCTTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp CAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCACAGGTGCATTCCCCTaGCTATTAATATTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: QGNTQFPHLKGYTVQPRSTGAFP*LLIFCL
Trigger: CAAGCAGAATATTAATAGGCAGGGGAATGCACCTGT...GGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp AAATACAAACCCTTGGATCACATGGGGGCTTCTGGGAACCCCCGTATTCTTCCCAGGATGAACCATCACTaGCAGCTGTCTATAGGCCTT +
Preference number: 4 (lower is better)
Translates to: KYKPLDHMGASGNPRILPRMNHH*QLSIGL
Trigger: AAGGCCTATAGACAGCTGGCAGTGATGGTTCATCCT...GGGAAGAATACGGGGGTTCCCAGAAGCCCCCATGTGATCCAAGGGTTTGTATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACGACAATGTCCCAAGCTaGTCGCAAAACCTTGAAGGC +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDDNVPS*SQNLEG
Trigger: GCCTTCAAGGTTTTGCGAGCAGCTTGGGACATTGTC...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp ATACAGACCCCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGACAATGTCCCAAGCTaGTCGCAAAACCTTGAAGGC +
Preference number: 4 (lower is better)
Translates to: IQTPGKYPVPTPKGIHCPDNVPS*SQNLEG
Trigger: GCCTTCAAGGTTTTGCGAGCAGCTTGGGACATTGTC...TGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGGGGTCTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp GAACCCCCGTATTCTTCCCCCTCACCCAAGGGCAGTGGGCATGAATCTACTTTTTCCTTGAGGTCATCTTaGAGCTTGGACAGAAACTCA +
Preference number: 4 (lower is better)
Translates to: EPPYSSPSPKGSGHESTFSLRSS*SLDRNS
Trigger: TGAGTTTCTGTCCAAGCTGCAAGATGACCTCAAGGA...AAAAGTAGATTCATGCCCACTGCCCTTGGGTGAGGGGGAAGAATACGGGGGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTCCTTCCTCAGCAGGATaGAGCCTATTACACTCAGCA +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFPSSAG*SLLHSA
Trigger: TGCTGAGTGTAATAGGCTGCATCCTGCTGAGGAAGG...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp CCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCTTTCCATCCATCAGTaGAAAGTAGGTGATCTTGAG +
Preference number: 4 (lower is better)
Translates to: PGKYPVPTPKGIHCPAQVLSIHQ*KVGDLE
Trigger: CTCAAGATCACCTACTTTGCACTGATGGATGGAAAG...GACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACCTGAGATGGGAGAATTaGTTGAACCCGGGAGACAGA +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDLRWEN*LNPGDR
Trigger: TCTGTCTCCCGGGTTCAAGCAATTCTCCCATCTCAG...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp ATACAGACCCCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCACTGAGATGGGAGAATTaGTTGAACCCGGGAGACAGA +
Preference number: 4 (lower is better)
Translates to: IQTPGKYPVPTPKGIHCPLRWEN*LNPGDR
Trigger: TCTGTCTCCCGGGTTCAAGCAATTCTCCCATCTCAG...TGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGGGGTCTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACAGGTCACAGCCATCATaGTGTGTTCTGATGCCTGGA +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDRSQPS*CVLMPG
Trigger: TCCAGGCATCAGAACACACCATGATGGCTGTGACCT...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317287.5
CDS-3UTR CCA 90 bp CTAAAAGCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCGAGGCACCACCACTGTaGTGGGCTCCATACAACCCT +
Preference number: 4 (lower is better)
Translates to: LKANDKTKAYRPQGNTQFEAPPL*WAPYNP
Trigger: AGGGTTGTATGGAGCCCACCACAGTGGTGGTGCCTC...GAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGCTTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp CTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATTCAGGCCGGGCACCAATGGGCTGGGTTTaGGTGCTGTGTGTGCTTAGG +
Preference number: 4 (lower is better)
Translates to: LATPYFFGIVKRQDSGRAPMGWV*VLCVLR
Trigger: CCTAAGCACACACAGCACCCAAACCCAGCCCATTGG...TGCCCGGCCTGAATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AAATACAAACCCTTGGATCACATGGGGGCTTCTGGGAACCCCCGTATTCTTCCCGAGTTCCCATCCTTCTaGTTCCCAGTCTCGTTTTCT +
Preference number: 4 (lower is better)
Translates to: KYKPLDHMGASGNPRILPEFPSF*FPVSFS
Trigger: AGAAAACGAGACTGGGAACCAGAAGGATGGGAACTC...GGGAAGAATACGGGGGTTCCCAGAAGCCCCCATGTGATCCAAGGGTTTGTATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACATTCCAGGTGTTCCCTaGCAGTTGCAAGCAGATGGA +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDIPGVP*QLQADG
Trigger: TCCATCTGCTTGCAACTGCCAGGGAACACCTGGAAT...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTAGAGTAAGGCCCTTCTaGAATTCCAGGTGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFRVRPF*NSRCSL
Trigger: CAGGGAACACCTGGAATTCCAGAAGGGCCTTACTCT...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACAGAGTAAGGCCCTTCTaGAATTCCAGGTGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDRVRPF*NSRCSL
Trigger: CAGGGAACACCTGGAATTCCAGAAGGGCCTTACTCT...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AAATACAAACCCTTGGATCACATGGGGGCTTCTGGGAACCCCCGTATTCTTCCCGCTGGAGAGGTACAGTaGTGGCAAAAGTTGCTAGAA +
Preference number: 4 (lower is better)
Translates to: KYKPLDHMGASGNPRILPAGEVQ*WQKLLE
Trigger: TTCTAGCAACTTTTGCCACCACTGTACCTCTCCAGC...GGGAAGAATACGGGGGTTCCCAGAAGCCCCCATGTGATCCAAGGGTTTGTATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AAATACAAACCCTTGGATCACATGGGGGCTTCTGGGAACCCCCGTATTCTTCCCTCAACCCCCAGTACATaGAAAGGGTTTAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: KYKPLDHMGASGNPRILPSTPST*KGFSSS
Trigger: GGATGAGCTAAACCCTTTCCATGTACTGGGGGTTGA...GGGAAGAATACGGGGGTTCCCAGAAGCCCCCATGTGATCCAAGGGTTTGTATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACCAACATCTGATGCTGTaGCCTCAACCCCCAGTACAT +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDQHLML*PQPPVH
Trigger: ATGTACTGGGGGTTGAGGCCACAGCATCAGATGTTG...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp CAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCGGTCATCTTGCAGCTTaGACAGAAACTCATTTACTG +
Preference number: 4 (lower is better)
Translates to: QGNTQFPHLKGYTVQPRSGHLAA*TETHLL
Trigger: CAGTAAATGAGTTTCTGTCCAAGCTGCAAGATGACC...GGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp ACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTAGGTTCTTTACTCCTCCTATGCTTTCCTTaGCATCGGCTACACATCATA +
Preference number: 4 (lower is better)
Translates to: TPKGIHCPAQVQALGSLLLLCFP*HRLHII
Trigger: TATGATGTGTAGCCGATGCCAAGGAAAGCATAGGAG...GAGTAAAGAACCTAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTATAGTTGGGGGTCTCTaGTCCTGGACTAGAGCAGTA +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFIVGGL*SWTRAV
Trigger: TACTGCTCTAGTCCAGGACCAGAGACCCCCAACTAT...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000357606.7
ENST00000547445.2
CDS-3UTR CCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACAGGTCACAGCCATCATaGTGTGTTCTGATGCCGAAG +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDRSQPS*CVLMPK
Trigger: CTTCGGCATCAGAACACACCATGATGGCTGTGACCT...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357606.7
ENST00000678005.2
CDS-3UTR CCA 90 bp CAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCGTAGCTTTAAAAGGGTaGGAAAAAGTGTCATCTGCC +
Preference number: 4 (lower is better)
Translates to: QGNTQFPHLKGYTVQPRSVALKG*EKVSSA
Trigger: GGCAGATGACACTTTTTCCCACCCTTTTAAAGCTAC...GGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp GAACCCCCGTATTCTTCCCCCTCACCCAAGGGCAGTGGGCATGAATCTACTTTTGGCTCCCTCCTGAAATaGGTCAAGAAAGAAGATAGA +
Preference number: 4 (lower is better)
Translates to: EPPYSSPSPKGSGHESTFGSLLK*VKKEDR
Trigger: TCTATCTTCTTTCTTGACCCATTTCAGGAGGGAGCC...AAAAGTAGATTCATGCCCACTGCCCTTGGGTGAGGGGGAAGAATACGGGGGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp CTAAAAGCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCAACCCTTGGATCACATaGGGGCTTCTGGGAACCCCC +
Preference number: 4 (lower is better)
Translates to: LKANDKTKAYRPQGNTQFNPWIT*GLLGTP
Trigger: GGGGGTTCCCAGAAGCCCCCATGTGATCCAAGGGTT...GAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGCTTTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp GCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCCCACACAGGTCACAGCCATCATaGTGTGTTCTGATGCCTGCT +
Preference number: 4 (lower is better)
Translates to: ANDKTKAYRPQGNTQFPHRSQPS*CVLMPA
Trigger: AGCAGGCATCAGAACACACCATGATGGCTGTGACCT...GTGTGGGAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547445.2
CDS-3UTR TCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTCCTTATACCCCGTCTTaGTCCGAAAGTTTTTCCACC +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFPYTPS*SESFST
Trigger: GGTGGAAAAACTTTCGGATCAAGACGGGGTATAAGG...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000317287.5
CDS-3UTR TCA 90 bp CTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATTCAGGCCGGGCATCCCTGCTGAGTCCCTaGGTCCTGAGAATGAAGGTA +
Preference number: 4 (lower is better)
Translates to: LATPYFFGIVKRQDSGRASLLSP*VLRMKV
Trigger: TACCTTCATTCTCAGGACTCAGGGACTCAGCAGGGA...TGCCCGGCCTGAATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTAGTCTCGTTTTCTTTTaGGAGTTCCTGGTCCACTCC +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFSLVFF*EFLVHS
Trigger: GGAGTGGACCAGGAACTCTCAAAAGAAAACGAGACT...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTCAGAAACTCATTTACTaGCCGGCTCAGCTCATTCTC +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFQKLIY*PAQLIL
Trigger: GAGAATGAGCTGAGCCGGTCAGTAAATGAGTTTCTG...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACTATTCATTGCCTCCTTaGGGTCATCTTGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDYSLPP*GHLAAW
Trigger: CCAAGCTGCAAGATGACCTCAAGGAGGCAATGAATA...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTTATTCATTGCCTCCTTaGGGTCATCTTGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFYSLPP*GHLAAW
Trigger: CCAAGCTGCAAGATGACCTCAAGGAGGCAATGAATA...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp ATACAGACCCCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCATATTCATTGCCTCCTTaGGGTCATCTTGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: IQTPGKYPVPTPKGIHCPYSLPP*GHLAAW
Trigger: CCAAGCTGCAAGATGACCTCAAGGAGGCAATGAATA...TGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGGGGTCTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp GCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCCCACACTATTCATTGCCTCCTTaGGGTCATCTTGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: ANDKTKAYRPQGNTQFPHYSLPP*GHLAAW
Trigger: CCAAGCTGCAAGATGACCTCAAGGAGGCAATGAATA...GTGTGGGAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACATCCAGCCCACTCTGTaGTGTCATACACCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDIQPTL*CHTPFH
Trigger: ATGGAAAGGTGTATGACATCACAGAGTGGGCTGGAT...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp AAATACAAACCCTTGGATCACATGGGGGCTTCTGGGAACCCCCGTATTCTTCCCAATCCGAGAACCAAATaGGATGTGATAGGGGACTCT +
Preference number: 4 (lower is better)
Translates to: KYKPLDHMGASGNPRILPNPRTK*DVIGDS
Trigger: AGAGTCCCCTATCACATCTCATTTGGTTCTCGGATT...GGGAAGAATACGGGGGTTCCCAGAAGCCCCCATGTGATCCAAGGGTTTGTATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTTCCCTGACATTGATTTaGGGAAAGAGAAGGGGCATC +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFSLTLI*GKRRGI
Trigger: GATGCCCCTTCTCTTTCCTCAAATCAATGTCAGGGA...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACTCCCTGACATTGATTTaGGGAAAGAGAAGGGGCATC +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDSLTLI*GKRRGI
Trigger: GATGCCCCTTCTCTTTCCTCAAATCAATGTCAGGGA...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp CTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATTCAGGCCGGGCAGAGAGGGCTCCCTCCTaGAATGGGTCAAGAAAGAAG +
Preference number: 4 (lower is better)
Translates to: LATPYFFGIVKRQDSGRAERAPS*NGSRKK
Trigger: CTTCTTTCTTGACCCATTTCAGGAGGGAGCCCTCTC...TGCCCGGCCTGAATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp CAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCGATTTACCCACAAAGTaGAAGTCGAGGGAAAATTCA +
Preference number: 4 (lower is better)
Translates to: QGNTQFPHLKGYTVQPRSDLPTK*KSRENS
Trigger: TGAATTTTCCCTCGACTTTCACTTTGTGGGTAAATC...GGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp CAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCGAGCCTAAAATTGGGTaGTTTACCCACAAAGTGAAA +
Preference number: 4 (lower is better)
Translates to: QGNTQFPHLKGYTVQPRSEPKIG*FTHKVK
Trigger: TTTCACTTTGTGGGTAAATCACCCAATTTTAGGCTC...GGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp CTAAAAGCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCTGGGCTGGGTTTGGGTaGTGTGTGTGCTTAGGACCA +
Preference number: 4 (lower is better)
Translates to: LKANDKTKAYRPQGNTQFWAGFG*CVCLGP
Trigger: TGGTCCTAAGCACACACAGCACCCAAACCCAGCCCA...GAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGCTTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGTGTTCCCTGGCAGTTaGAAGCAGATGGAATGGAAA +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFVFPGS*KQMEWK
Trigger: TTTCCATTCCATCTGCTTGCAACTGCCAGGGAACAC...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACGTGTTCCCTGGCAGTTaGAAGCAGATGGAATGGAAA +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDVFPGS*KQMEWK
Trigger: TTTCCATTCCATCTGCTTGCAACTGCCAGGGAACAC...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp CTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATTCAGGCCGGGCAAGAGTCAAGCAACGCTaGAAGGCTGGAGAATCCAGC +
Preference number: 4 (lower is better)
Translates to: LATPYFFGIVKRQDSGRARVKQR*KAGESS
Trigger: GCTGGATTCTCCAGCCTTGCAGCGTTGCTTGACTCT...TGCCCGGCCTGAATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTCCCACTAGCTACAGGTaGATTCCCCTGCCTATTAAT +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFPTSYR*IPLPIN
Trigger: ATTAATAGGCAGGGGAATGCACCTGTAGCTAGTGGG...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp ATACAGACCCCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCACCCACTAGCTACAGGTaGATTCCCCTGCCTATTAAT +
Preference number: 4 (lower is better)
Translates to: IQTPGKYPVPTPKGIHCPPTSYR*IPLPIN
Trigger: ATTAATAGGCAGGGGAATGCACCTGTAGCTAGTGGG...TGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGGGGTCTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTAGGATGAACCATCACTaGCAGCTGTCTATAGGCCTT +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFRMNHH*QLSIGL
Trigger: AAGGCCTATAGACAGCTGGCAGTGATGGTTCATCCT...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp GAACCCCCGTATTCTTCCCCCTCACCCAAGGGCAGTGGGCATGAATCTACTTTTCTTTCCATCCATCAGTaGAAAGTAGGTGATCTTGAG +
Preference number: 4 (lower is better)
Translates to: EPPYSSPSPKGSGHESTFLSIHQ*KVGDLE
Trigger: CTCAAGATCACCTACTTTGCACTGATGGATGGAAAG...AAAAGTAGATTCATGCCCACTGCCCTTGGGTGAGGGGGAAGAATACGGGGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTTCAAACTCCATCCTGTaGTACAGCCCTTTTGACTCC +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFSNSIL*YSPFDS
Trigger: GGAGTCAAAAGGGCTGTAGCACAGGATGGAGTTTGA...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACTCAAACTCCATCCTGTaGTACAGCCCTTTTGACTCC +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDSNSIL*YSPFDS
Trigger: GGAGTCAAAAGGGCTGTAGCACAGGATGGAGTTTGA...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp CTAAAAGCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCCCAATGGGCTGGGTTTaGGTGCTGTGTGTGCTTAGG +
Preference number: 4 (lower is better)
Translates to: LKANDKTKAYRPQGNTQFPMGWV*VLCVLR
Trigger: CCTAAGCACACACAGCACCCAAACCCAGCCCATTGG...GAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGCTTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGAGTTCCCATCCTTCTaGTTCCCAGTCTCGTTTTCT +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFEFPSF*FPVSFS
Trigger: AGAAAACGAGACTGGGAACCAGAAGGATGGGAACTC...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp ATACAGACCCCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGAGTTCCCATCCTTCTaGTTCCCAGTCTCGTTTTCT +
Preference number: 4 (lower is better)
Translates to: IQTPGKYPVPTPKGIHCPEFPSF*FPVSFS
Trigger: AGAAAACGAGACTGGGAACCAGAAGGATGGGAACTC...TGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGGGGTCTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGCTGGAGAGGTACAGTaGTGGCAAAAGTTGCTAGAA +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFAGEVQ*WQKLLE
Trigger: TTCTAGCAACTTTTGCCACCACTGTACCTCTCCAGC...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACGGGGTTTCTTTCCGCTaGACACACGTGAAAAATCAC +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDGVSFR*THVKNH
Trigger: GTGATTTTTCACGTGTGTCCAGCGGAAAGAAACCCC...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp CTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATTCAGGCCGGGCAGCAACGCTGCAAGGCTaGAGAATCCAGCCAAGAGAA +
Preference number: 4 (lower is better)
Translates to: LATPYFFGIVKRQDSGRAATLQG*RIQPRE
Trigger: TTCTCTTGGCTGGATTCTCCAGCCTTGCAGCGTTGC...TGCCCGGCCTGAATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTTCAACCCCCAGTACATaGAAAGGGTTTAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFSTPST*KGFSSS
Trigger: GGATGAGCTAAACCCTTTCCATGTACTGGGGGTTGA...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp GCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCCCACACTCAACCCCCAGTACATaGAAAGGGTTTAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: ANDKTKAYRPQGNTQFPHSTPST*KGFSSS
Trigger: GGATGAGCTAAACCCTTTCCATGTACTGGGGGTTGA...GTGTGGGAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp CTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATTCAGGCCGGGCAATTGGGCATCTGCCCTaGGGGTACTTGAAAGATCCG +
Preference number: 4 (lower is better)
Translates to: LATPYFFGIVKRQDSGRAIGHLP*GYLKDP
Trigger: CGGATCTTTCAAGTACCCCCAGGGCAGATGCCCAAT...TGCCCGGCCTGAATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp CTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATTCAGGCCGGGCAGTTTGGCTTCTCCCTTaGGTACTGTGCTGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: LATPYFFGIVKRQDSGRAVWLLP*VLCCWA
Trigger: AGCCCAACAGCACAGTACCCAAGGGAGAAGCCAAAC...TGCCCGGCCTGAATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp CTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATTCAGGCCGGGCAAAGGGGCATCAACGTTaGAAGGGCCTCCTCACTTTC +
Preference number: 4 (lower is better)
Translates to: LATPYFFGIVKRQDSGRAKGHQR*KGLLTF
Trigger: GAAAGTGAGGAGGCCCTTCCAACGTTGATGCCCCTT...TGCCCGGCCTGAATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACTCAGTTCCTAGGTGTTaGGGGAGGAGGGATAAATCA +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDSVPRC*GRRDKS
Trigger: TGATTTATCCCTCCTCCCCCAACACCTAGGAACTGA...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp ATACAGACCCCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCATCAGTTCCTAGGTGTTaGGGGAGGAGGGATAAATCA +
Preference number: 4 (lower is better)
Translates to: IQTPGKYPVPTPKGIHCPSVPRC*GRRDKS
Trigger: TGATTTATCCCTCCTCCCCCAACACCTAGGAACTGA...TGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGGGGTCTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp GAACCCCCGTATTCTTCCCCCTCACCCAAGGGCAGTGGGCATGAATCTACTTTTGTAGCTTTAAAAGGGTaGGAAAAAGTGTCATCTGCC +
Preference number: 4 (lower is better)
Translates to: EPPYSSPSPKGSGHESTFVALKG*EKVSSA
Trigger: GGCAGATGACACTTTTTCCCACCCTTTTAAAGCTAC...AAAAGTAGATTCATGCCCACTGCCCTTGGGTGAGGGGGAAGAATACGGGGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp CTAAAAGCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCTCACATGGGGGCTTCTaGGAACCCCCGTATTCTTCC +
Preference number: 4 (lower is better)
Translates to: LKANDKTKAYRPQGNTQFSHGGF*EPPYSS
Trigger: GGAAGAATACGGGGGTTCCCAGAAGCCCCCATGTGA...GAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGCTTTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp CTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATTCAGGCCGGGCAAGGTCACAGCCATCATaGTGTGTTCTGATGCCGGCT +
Preference number: 4 (lower is better)
Translates to: LATPYFFGIVKRQDSGRARSQPS*CVLMPA
Trigger: AGCCGGCATCAGAACACACCATGATGGCTGTGACCT...TGCCCGGCCTGAATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546957.2
CDS-3UTR TCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTAATCCGAGAACCAAATaGGATGTGATAGGGGACTCT +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFNPRTK*DVIGDS
Trigger: AGAGTCCCCTATCACATCTCATTTGGTTCTCGGATT...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACAATCCGAGAACCAAATaGGATGTGATAGGGGACTCT +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDNPRTK*DVIGDS
Trigger: AGAGTCCCCTATCACATCTCATTTGGTTCTCGGATT...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp GAACCCCCGTATTCTTCCCCCTCACCCAAGGGCAGTGGGCATGAATCTACTTTTGAGCCTAAAATTGGGTaGTTTACCCACAAAGTGAAA +
Preference number: 4 (lower is better)
Translates to: EPPYSSPSPKGSGHESTFEPKIG*FTHKVK
Trigger: TTTCACTTTGTGGGTAAATCACCCAATTTTAGGCTC...AAAAGTAGATTCATGCCCACTGCCCTTGGGTGAGGGGGAAGAATACGGGGGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp AAATACAAACCCTTGGATCACATGGGGGCTTCTGGGAACCCCCGTATTCTTCCCACAGGTGCATTCCCCTaGCTATTAATATTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: KYKPLDHMGASGNPRILPTGAFP*LLIFCL
Trigger: CAAGCAGAATATTAATAGGCAGGGGAATGCACCTGT...GGGAAGAATACGGGGGTTCCCAGAAGCCCCCATGTGATCCAAGGGTTTGTATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTTCCTTGAGGTCATCTTaGAGCTTGGACAGAAACTCA +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFSLRSS*SLDRNS
Trigger: TGAGTTTCTGTCCAAGCTGCAAGATGACCTCAAGGA...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp GAACCCCCGTATTCTTCCCCCTCACCCAAGGGCAGTGGGCATGAATCTACTTTTCATCATAGTATTCATTaGCTCCTTGAGGTCATCTTG +
Preference number: 4 (lower is better)
Translates to: EPPYSSPSPKGSGHESTFHHSIH*LLEVIL
Trigger: CAAGATGACCTCAAGGAGGCAATGAATACTATGATG...AAAAGTAGATTCATGCCCACTGCCCTTGGGTGAGGGGGAAGAATACGGGGGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp AAATACAAACCCTTGGATCACATGGGGGCTTCTGGGAACCCCCGTATTCTTCCCATTTCAAACCTCCTATaGTTTCCTTGGCATCGGCTA +
Preference number: 4 (lower is better)
Translates to: KYKPLDHMGASGNPRILPISNLL*FPWHRL
Trigger: TAGCCGATGCCAAGGAAAGCATAGGAGGTTTGAAAT...GGGAAGAATACGGGGGTTCCCAGAAGCCCCCATGTGATCCAAGGGTTTGTATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp CTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATTCAGGCCGGGCACTGAGATGGGAGAATTaGTTGAACCCGGGAGACAGA +
Preference number: 4 (lower is better)
Translates to: LATPYFFGIVKRQDSGRALRWEN*LNPGDR
Trigger: TCTGTCTCCCGGGTTCAAGCAATTCTCCCATCTCAG...TGCCCGGCCTGAATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp ACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTAGGTTCTTTACTCGCAGTTGCAAGCAGATaGAATGGAAAGAAAAGAGTT +
Preference number: 4 (lower is better)
Translates to: TPKGIHCPAQVQALGSLLAVASR*NGKKRV
Trigger: AACTCTTTTCTTTCCATTCCATCTGCTTGCAACTGC...GAGTAAAGAACCTAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AGGTTCTTTACTCTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATGTCGACCAGGGGACCTaGGATCCCTACGTCCACCCT +
Preference number: 4 (lower is better)
Translates to: RFFTLATPYFFGIVKRQDVDQGT*DPYVHP
Trigger: AGGGTGGACGTAGGGATCCCAGGTCCCCTGGTCGAC...ATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAGAGTAAAGAACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTCTCCTATGCTTTCCTTaGCATCGGCTACACATCATA +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFLLCFP*HRLHII
Trigger: TATGATGTGTAGCCGATGCCAAGGAAAGCATAGGAG...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp GCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCCCACACCTCCTATGCTTTCCTTaGCATCGGCTACACATCATA +
Preference number: 4 (lower is better)
Translates to: ANDKTKAYRPQGNTQFPHLLCFP*HRLHII
Trigger: TATGATGTGTAGCCGATGCCAAGGAAAGCATAGGAG...GTGTGGGAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp CTAAAAGCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCGTTTGGCTTCTCCCTTaGGTACTGTGCTGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: LKANDKTKAYRPQGNTQFVWLLP*VLCCWA
Trigger: AGCCCAACAGCACAGTACCCAAGGGAGAAGCCAAAC...GAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGCTTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp CTAAAAGCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCAAGGGGCATCAACGTTaGAAGGGCCTCCTCACTTTC +
Preference number: 4 (lower is better)
Translates to: LKANDKTKAYRPQGNTQFKGHQR*KGLLTF
Trigger: GAAAGTGAGGAGGCCCTTCCAACGTTGATGCCCCTT...GAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGCTTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp CTAAAAGCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCCCACTGCTATATAGTTaGGGGTCTCTGGTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: LKANDKTKAYRPQGNTQFPLLYS*GSLVLD
Trigger: GTCCAGGACCAGAGACCCCCAACTATATAGCAGTGG...GAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGCTTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357606.7
CDS-3UTR TCA 90 bp CTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATTCAGGCCGGGCATCCCTGACATTGATTTaGGGAAAGAGAAGGGGCATC +
Preference number: 4 (lower is better)
Translates to: LATPYFFGIVKRQDSGRASLTLI*GKRRGI
Trigger: GATGCCCCTTCTCTTTCCTCAAATCAATGTCAGGGA...TGCCCGGCCTGAATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp GCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCCCACACTCAGTTTCCAGTCTCTaGACTCTATGCGATAATCTC +
Preference number: 4 (lower is better)
Translates to: ANDKTKAYRPQGNTQFPHSVSSL*TLCDNL
Trigger: GAGATTATCGCATAGAGTTCAGAGACTGGAAACTGA...GTGTGGGAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTTCAGTTTCCAGTCTCTaGACTCTATGCGATAATCTC +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFSVSSL*TLCDNL
Trigger: GAGATTATCGCATAGAGTTCAGAGACTGGAAACTGA...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACAACTCATCTACCTGCTaGTTGACATCTCATCTGCAT +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDNSSTC*LTSHLH
Trigger: ATGCAGATGAGATGTCAAGCAGCAGGTAGATGAGTT...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317287.5
CDS-3UTR GCA 90 bp CTAAAAGCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCTTTGGGTGCTGTGTGTaGTTAGGACCAGAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: LKANDKTKAYRPQGNTQFFGCCV*LGPECS
Trigger: AGAGCACTCTGGTCCTAAGCACACACAGCACCCAAA...GAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGCTTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp CTAAAAGCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCACAATCCCAGGCCTTTaGGCTTATCTGCCTGACTTC +
Preference number: 4 (lower is better)
Translates to: LKANDKTKAYRPQGNTQFTIPGL*AYLPDF
Trigger: GAAGTCAGGCAGATAAGCGCAAAGGCCTGGGATTGT...GAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGCTTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp AAGAGGGAAGATACAGGTTGCCAGTTATACATTTATAGAAAGATAATCCCCTGGGCCGCTGCCATGGCCTaGTATCTCTCAGCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: KREDTGCQLYIYRKIIPWAAAMA*YLSAES
Trigger: TGACTCTGCTGAGAGATAGCAGGCCATGGCAGCGGC...CCAGGGGATTATCTTTCTATAAATGTATAACTGGCAACCTGTATCTTCCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357606.7
CDS-3UTR GCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTACAGGTGCATTCCCCTaGCTATTAATATTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFTGAFP*LLIFCL
Trigger: CAAGCAGAATATTAATAGGCAGGGGAATGCACCTGT...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp ATACAGACCCCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAACAGGTGCATTCCCCTaGCTATTAATATTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: IQTPGKYPVPTPKGIHCPTGAFP*LLIFCL
Trigger: CAAGCAGAATATTAATAGGCAGGGGAATGCACCTGT...TGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGGGGTCTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp CTAAAAGCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCGACAATGTCCCAAGCTaGTCGCAAAACCTTGAAGGC +
Preference number: 4 (lower is better)
Translates to: LKANDKTKAYRPQGNTQFDNVPS*SQNLEG
Trigger: GCCTTCAAGGTTTTGCGAGCAGCTTGGGACATTGTC...GAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGCTTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACATTTCAAACCTCCTATaGTTTCCTTGGCATCGGCTA +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDISNLL*FPWHRL
Trigger: TAGCCGATGCCAAGGAAAGCATAGGAGGTTTGAAAT...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp ATACAGACCCCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAATTTCAAACCTCCTATaGTTTCCTTGGCATCGGCTA +
Preference number: 4 (lower is better)
Translates to: IQTPGKYPVPTPKGIHCPISNLL*FPWHRL
Trigger: TAGCCGATGCCAAGGAAAGCATAGGAGGTTTGAAAT...TGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGGGGTCTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTATTTCAAACCTCCTATaGTTTCCTTGGCATCGGCTA +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFISNLL*FPWHRL
Trigger: TAGCCGATGCCAAGGAAAGCATAGGAGGTTTGAAAT...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp CTAAAAGCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCCCTTCCTCAGCAGGATaGAGCCTATTACACTCAGCA +
Preference number: 4 (lower is better)
Translates to: LKANDKTKAYRPQGNTQFPSSAG*SLLHSA
Trigger: TGCTGAGTGTAATAGGCTGCATCCTGCTGAGGAAGG...GAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGCTTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTCTTTCCATCCATCAGTaGAAAGTAGGTGATCTTGAG +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFLSIHQ*KVGDLE
Trigger: CTCAAGATCACCTACTTTGCACTGATGGATGGAAAG...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp ATACAGACCCCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCACTTTCCATCCATCAGTaGAAAGTAGGTGATCTTGAG +
Preference number: 4 (lower is better)
Translates to: IQTPGKYPVPTPKGIHCPLSIHQ*KVGDLE
Trigger: CTCAAGATCACCTACTTTGCACTGATGGATGGAAAG...TGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGGGGTCTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp AAGAGGGAAGATACAGGTTGCCAGTTATACATTTATAGAAAGATAATCCCCTGGTCTGCCGCCCTCTGGTaGCTGGAATCCGAGAACCAA +
Preference number: 4 (lower is better)
Translates to: KREDTGCQLYIYRKIIPWSAALW*LESENQ
Trigger: TTGGTTCTCGGATTCCAGGCACCAGAGGGCGGCAGA...CCAGGGGATTATCTTTCTATAAATGTATAACTGGCAACCTGTATCTTCCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357606.7
CDS-3UTR CCA 90 bp AAATACAAACCCTTGGATCACATGGGGGCTTCTGGGAACCCCCGTATTCTTCCCGCAGTTGCAAGCAGATaGAATGGAAAGAAAAGAGTT +
Preference number: 4 (lower is better)
Translates to: KYKPLDHMGASGNPRILPAVASR*NGKKRV
Trigger: AACTCTTTTCTTTCCATTCCATCTGCTTGCAACTGC...GGGAAGAATACGGGGGTTCCCAGAAGCCCCCATGTGATCCAAGGGTTTGTATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGGTCATCTTGCAGCTTaGACAGAAACTCATTTACTG +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFGHLAA*TETHLL
Trigger: CAGTAAATGAGTTTCTGTCCAAGCTGCAAGATGACC...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACGGTCATCTTGCAGCTTaGACAGAAACTCATTTACTG +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDGHLAA*TETHLL
Trigger: CAGTAAATGAGTTTCTGTCCAAGCTGCAAGATGACC...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp ATACAGACCCCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGGTCATCTTGCAGCTTaGACAGAAACTCATTTACTG +
Preference number: 4 (lower is better)
Translates to: IQTPGKYPVPTPKGIHCPGHLAA*TETHLL
Trigger: CAGTAAATGAGTTTCTGTCCAAGCTGCAAGATGACC...TGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGGGGTCTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTAAAAATACAAACCCTTaGATCACATGGGGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFKNTNP*ITWGLL
Trigger: CAGAAGCCCCCATGTGATCCAAGGGTTTGTATTTTT...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp ATACAGACCCCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAAAAAATACAAACCCTTaGATCACATGGGGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: IQTPGKYPVPTPKGIHCPKNTNP*ITWGLL
Trigger: CAGAAGCCCCCATGTGATCCAAGGGTTTGTATTTTT...TGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGGGGTCTGTAT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTAATCACTGGGGAACTTaGGAGATTCTTCATCATCAT +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFNHWGT*EILHHH
Trigger: ATGATGATGAAGAATCTCTCAAGTTCCCCAGTGATT...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACAATCACTGGGGAACTTaGGAGATTCTTCATCATCAT +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDNHWGT*EILHHH
Trigger: ATGATGATGAAGAATCTCTCAAGTTCCCCAGTGATT...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp GCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCCCACACAATCACTGGGGAACTTaGGAGATTCTTCATCATCAT +
Preference number: 4 (lower is better)
Translates to: ANDKTKAYRPQGNTQFPHNHWGT*EILHHH
Trigger: ATGATGATGAAGAATCTCTCAAGTTCCCCAGTGATT...GTGTGGGAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp CTAAAAGCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCCAGAAACTCATTTACTaGCCGGCTCAGCTCATTCTC +
Preference number: 4 (lower is better)
Translates to: LKANDKTKAYRPQGNTQFQKLIY*PAQLIL
Trigger: GAGAATGAGCTGAGCCGGTCAGTAAATGAGTTTCTG...GAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGCTTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACGAGCCTAAAATTGGGTaGTTTACCCACAAAGTGAAA +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDEPKIG*FTHKVK
Trigger: TTTCACTTTGTGGGTAAATCACCCAATTTTAGGCTC...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp CTAAAAGCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCGTGTTCCCTGGCAGTTaGAAGCAGATGGAATGGAAA +
Preference number: 4 (lower is better)
Translates to: LKANDKTKAYRPQGNTQFVFPGS*KQMEWK
Trigger: TTTCCATTCCATCTGCTTGCAACTGCCAGGGAACAC...GAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGCTTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp CTAAAAGCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCAGGATGAACCATCACTaGCAGCTGTCTATAGGCCTT +
Preference number: 4 (lower is better)
Translates to: LKANDKTKAYRPQGNTQFRMNHH*QLSIGL
Trigger: AAGGCCTATAGACAGCTGGCAGTGATGGTTCATCCT...GAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGCTTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp CTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATTCAGGCCGGGCATCCTTGAGGTCATCTTaGAGCTTGGACAGAAACTCA +
Preference number: 4 (lower is better)
Translates to: LATPYFFGIVKRQDSGRASLRSS*SLDRNS
Trigger: TGAGTTTCTGTCCAAGCTGCAAGATGACCTCAAGGA...TGCCCGGCCTGAATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTCATCATAGTATTCATTaGCTCCTTGAGGTCATCTTG +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFHHSIH*LLEVIL
Trigger: CAAGATGACCTCAAGGAGGCAATGAATACTATGATG...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACCATCATAGTATTCATTaGCTCCTTGAGGTCATCTTG +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDHHSIH*LLEVIL
Trigger: CAAGATGACCTCAAGGAGGCAATGAATACTATGATG...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp CTAAAAGCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCTCAAACTCCATCCTGTaGTACAGCCCTTTTGACTCC +
Preference number: 4 (lower is better)
Translates to: LKANDKTKAYRPQGNTQFSNSIL*YSPFDS
Trigger: GGAGTCAAAAGGGCTGTAGCACAGGATGGAGTTTGA...GAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGCTTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACGCAGTTGCAAGCAGATaGAATGGAAAGAAAAGAGTT +
Preference number: 4 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDAVASR*NGKKRV
Trigger: AACTCTTTTCTTTCCATTCCATCTGCTTGCAACTGC...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGCAGTTGCAAGCAGATaGAATGGAAAGAAAAGAGTT +
Preference number: 4 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFAVASR*NGKKRV
Trigger: AACTCTTTTCTTTCCATTCCATCTGCTTGCAACTGC...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AGGTTCTTTACTCTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATTACCAGCCGCTGCCATaGCCTGCTATCTCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: RFFTLATPYFFGIVKRQDYQPLP*PAISQQ
Trigger: CTGCTGAGAGATAGCAGGCCATGGCAGCGGCTGGTA...ATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAGAGTAAAGAACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp CTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATTCAGGCCGGGCAGGCTCCCTCCTGAAATaGGTCAAGAAAGAAGATAGA +
Preference number: 4 (lower is better)
Translates to: LATPYFFGIVKRQDSGRAGSLLK*VKKEDR
Trigger: TCTATCTTCTTTCTTGACCCATTTCAGGAGGGAGCC...TGCCCGGCCTGAATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp AAGAGGGAAGATACAGGTTGCCAGTTATACATTTATAGAAAGATAATCCCCTGGGAAGACGTCTCACTCTaGTCAGGGTCCTCTGCATCT +
Preference number: 4 (lower is better)
Translates to: KREDTGCQLYIYRKIIPWEDVSL*SGSSAS
Trigger: AGATGCAGAGGACCCTGATCAGAGTGAGACGTCTTC...CCAGGGGATTATCTTTCTATAAATGTATAACTGGCAACCTGTATCTTCCCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357606.7
CDS-3UTR TCA 90 bp CTAAAAGCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCAATCCGAGAACCAAATaGGATGTGATAGGGGACTCT +
Preference number: 4 (lower is better)
Translates to: LKANDKTKAYRPQGNTQFNPRTK*DVIGDS
Trigger: AGAGTCCCCTATCACATCTCATTTGGTTCTCGGATT...GAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGCTTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp AAGAGGGAAGATACAGGTTGCCAGTTATACATTTATAGAAAGATAATCCCCTGGGATGGGAGAATTGCTTaGACCCGGGAGACAGAGGTT +
Preference number: 4 (lower is better)
Translates to: KREDTGCQLYIYRKIIPWDGRIA*TRETEV
Trigger: AACCTCTGTCTCCCGGGTTCAAGCAATTCTCCCATC...CCAGGGGATTATCTTTCTATAAATGTATAACTGGCAACCTGTATCTTCCCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357606.7
CDS-3UTR TCA 90 bp CTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATTCAGGCCGGGCATCAGTTTCCAGTCTCTaGACTCTATGCGATAATCTC +
Preference number: 4 (lower is better)
Translates to: LATPYFFGIVKRQDSGRASVSSL*TLCDNL
Trigger: GAGATTATCGCATAGAGTTCAGAGACTGGAAACTGA...TGCCCGGCCTGAATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp AGGTTCTTTACTCTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATTGGGCTGGGTTTGGGTaGTGTGTGTGCTTAGGACCA +
Preference number: 4 (lower is better)
Translates to: RFFTLATPYFFGIVKRQDWAGFG*CVCLGP
Trigger: TGGTCCTAAGCACACACAGCACCCAAACCCAGCCCA...ATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAGAGTAAAGAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp AAGAGGGAAGATACAGGTTGCCAGTTATACATTTATAGAAAGATAATCCCCTGGAGAGTCAAGCAACGCTaGAAGGCTGGAGAATCCAGC +
Preference number: 4 (lower is better)
Translates to: KREDTGCQLYIYRKIIPWRVKQR*KAGESS
Trigger: GCTGGATTCTCCAGCCTTGCAGCGTTGCTTGACTCT...CCAGGGGATTATCTTTCTATAAATGTATAACTGGCAACCTGTATCTTCCCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357606.7
CDS-3UTR CCA 90 bp AGGTTCTTTACTCTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATGCACCACCACTGTGGTaGGCTCCATACAACCCTCTT +
Preference number: 4 (lower is better)
Translates to: RFFTLATPYFFGIVKRQDAPPLW*APYNPL
Trigger: AAGAGGGTTGTATGGAGCCCACCACAGTGGTGGTGC...ATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAGAGTAAAGAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AGGTTCTTTACTCTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATGAGATACCTACACGCTaGCATCCAGCCCACTCTGTG +
Preference number: 4 (lower is better)
Translates to: RFFTLATPYFFGIVKRQDEIPTR*HPAHSV
Trigger: CACAGAGTGGGCTGGATGCCAGCGTGTAGGTATCTC...ATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAGAGTAAAGAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AAGAGGGAAGATACAGGTTGCCAGTTATACATTTATAGAAAGATAATCCCCTGGCTCAGGAGGCTGAGATaGGAGAATTGCTTGAACCCG +
Preference number: 4 (lower is better)
Translates to: KREDTGCQLYIYRKIIPWLRRLR*ENCLNP
Trigger: CGGGTTCAAGCAATTCTCCCATCTCAGCCTCCTGAG...CCAGGGGATTATCTTTCTATAAATGTATAACTGGCAACCTGTATCTTCCCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357606.7
CDS-3UTR CCA 90 bp AGGTTCTTTACTCTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATTCACATGGGGGCTTCTaGGAACCCCCGTATTCTTCC +
Preference number: 4 (lower is better)
Translates to: RFFTLATPYFFGIVKRQDSHGGF*EPPYSS
Trigger: GGAAGAATACGGGGGTTCCCAGAAGCCCCCATGTGA...ATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAGAGTAAAGAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp AGGTTCTTTACTCTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATCTTCAGTTCAACATCTaGTGCTGTGGCCTCAACCCC +
Preference number: 4 (lower is better)
Translates to: RFFTLATPYFFGIVKRQDLQFNI*CCGLNP
Trigger: GGGGTTGAGGCCACAGCATCAGATGTTGAACTGAAG...ATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAGAGTAAAGAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp AGGTTCTTTACTCTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATCGACTCAAGAAATCCTaGAGATCAGCAGGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: RFFTLATPYFFGIVKRQDRLKKS*RSAGGA
Trigger: TGCCCCTCCTGCTGATCTTCAGGATTTCTTGAGTCG...ATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAGAGTAAAGAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp CTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATTCAGGCCGGGCAGATTTACCCACAAAGTaGAAGTCGAGGGAAAATTCA +
Preference number: 4 (lower is better)
Translates to: LATPYFFGIVKRQDSGRADLPTK*KSRENS
Trigger: TGAATTTTCCCTCGACTTTCACTTTGTGGGTAAATC...TGCCCGGCCTGAATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp CTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATTCAGGCCGGGCAGAGCCTAAAATTGGGTaGTTTACCCACAAAGTGAAA +
Preference number: 4 (lower is better)
Translates to: LATPYFFGIVKRQDSGRAEPKIG*FTHKVK
Trigger: TTTCACTTTGTGGGTAAATCACCCAATTTTAGGCTC...TGCCCGGCCTGAATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp AAGAGGGAAGATACAGGTTGCCAGTTATACATTTATAGAAAGATAATCCCCTGGTTTGGGTGCTGTGTGTaGTTAGGACCAGAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: KREDTGCQLYIYRKIIPWFGCCV*LGPECS
Trigger: AGAGCACTCTGGTCCTAAGCACACACAGCACCCAAA...CCAGGGGATTATCTTTCTATAAATGTATAACTGGCAACCTGTATCTTCCCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357606.7
CDS-3UTR GCA 90 bp AGGTTCTTTACTCTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATCCGGGAGACAGAGGTTaGAGTAAGCTGAGATCACAC +
Preference number: 4 (lower is better)
Translates to: RFFTLATPYFFGIVKRQDPGDRG*SKLRSH
Trigger: GTGTGATCTCAGCTTACTGCAACCTCTGTCTCCCGG...ATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAGAGTAAAGAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp CTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATTCAGGCCGGGCAGCAGTTGCAAGCAGATaGAATGGAAAGAAAAGAGTT +
Preference number: 4 (lower is better)
Translates to: LATPYFFGIVKRQDSGRAAVASR*NGKKRV
Trigger: AACTCTTTTCTTTCCATTCCATCTGCTTGCAACTGC...TGCCCGGCCTGAATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AGGTTCTTTACTCTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATATCTTCCCCCAAAGCTaGAGAGGTACAGTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: RFFTLATPYFFGIVKRQDIFPQS*RGTVVA
Trigger: TGCCACCACTGTACCTCTCCAGCTTTGGGGGAAGAT...ATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAGAGTAAAGAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AGGTTCTTTACTCTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATCAAAGAAGTTCCCATTaGGCATCTGCCCTGGGGGTA +
Preference number: 4 (lower is better)
Translates to: RFFTLATPYFFGIVKRQDQRSSH*ASALGV
Trigger: TACCCCCAGGGCAGATGCCCAATGGGAACTTCTTTG...ATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAGAGTAAAGAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AAGAGGGAAGATACAGGTTGCCAGTTATACATTTATAGAAAGATAATCCCCTGGATAGTTGGGGGTCTCTaGTCCTGGACTAGAGCAGTA +
Preference number: 4 (lower is better)
Translates to: KREDTGCQLYIYRKIIPWIVGGL*SWTRAV
Trigger: TACTGCTCTAGTCCAGGACCAGAGACCCCCAACTAT...CCAGGGGATTATCTTTCTATAAATGTATAACTGGCAACCTGTATCTTCCCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357606.7
CDS-3UTR CCA 90 bp AAGAGGGAAGATACAGGTTGCCAGTTATACATTTATAGAAAGATAATCCCCTGGAGGTCACAGCCATCATaGTGTGTTCTGATGCCGAAG +
Preference number: 4 (lower is better)
Translates to: KREDTGCQLYIYRKIIPWRSQPS*CVLMPK
Trigger: CTTCGGCATCAGAACACACCATGATGGCTGTGACCT...CCAGGGGATTATCTTTCTATAAATGTATAACTGGCAACCTGTATCTTCCCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357606.7
CDS-3UTR CCA 90 bp CTAAAAGCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCAAAAATACAAACCCTTaGATCACATGGGGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: LKANDKTKAYRPQGNTQFKNTNP*ITWGLL
Trigger: CAGAAGCCCCCATGTGATCCAAGGGTTTGTATTTTT...GAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGCTTTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp CTAAAAGCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCGATTTACCCACAAAGTaGAAGTCGAGGGAAAATTCA +
Preference number: 4 (lower is better)
Translates to: LKANDKTKAYRPQGNTQFDLPTK*KSRENS
Trigger: TGAATTTTCCCTCGACTTTCACTTTGTGGGTAAATC...GAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGCTTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp AGGTTCTTTACTCTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATACAATCCCAGGCCTTTaGGCTTATCTGCCTGACTTC +
Preference number: 4 (lower is better)
Translates to: RFFTLATPYFFGIVKRQDTIPGL*AYLPDF
Trigger: GAAGTCAGGCAGATAAGCGCAAAGGCCTGGGATTGT...ATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAGAGTAAAGAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp AAGAGGGAAGATACAGGTTGCCAGTTATACATTTATAGAAAGATAATCCCCTGGCCCACTAGCTACAGGTaGATTCCCCTGCCTATTAAT +
Preference number: 4 (lower is better)
Translates to: KREDTGCQLYIYRKIIPWPTSYR*IPLPIN
Trigger: ATTAATAGGCAGGGGAATGCACCTGTAGCTAGTGGG...CCAGGGGATTATCTTTCTATAAATGTATAACTGGCAACCTGTATCTTCCCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357606.7
CDS-3UTR GCA 90 bp CTAAAAGCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCCATCATAGTATTCATTaGCTCCTTGAGGTCATCTTG +
Preference number: 4 (lower is better)
Translates to: LKANDKTKAYRPQGNTQFHHSIH*LLEVIL
Trigger: CAAGATGACCTCAAGGAGGCAATGAATACTATGATG...GAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGCTTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp AGGTTCTTTACTCTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATCCTTCCTCAGCAGGATaGAGCCTATTACACTCAGCA +
Preference number: 4 (lower is better)
Translates to: RFFTLATPYFFGIVKRQDPSSAG*SLLHSA
Trigger: TGCTGAGTGTAATAGGCTGCATCCTGCTGAGGAAGG...ATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAGAGTAAAGAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AAGAGGGAAGATACAGGTTGCCAGTTATACATTTATAGAAAGATAATCCCCTGGGGGGTTTCTTTCCGCTaGACACACGTGAAAAATCAC +
Preference number: 4 (lower is better)
Translates to: KREDTGCQLYIYRKIIPWGVSFR*THVKNH
Trigger: GTGATTTTTCACGTGTGTCCAGCGGAAAGAAACCCC...CCAGGGGATTATCTTTCTATAAATGTATAACTGGCAACCTGTATCTTCCCTCTT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000357606.7
CDS-3UTR CCA 90 bp AGGTTCTTTACTCTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATCAACATCTGATGCTGTaGCCTCAACCCCCAGTACAT +
Preference number: 4 (lower is better)
Translates to: RFFTLATPYFFGIVKRQDQHLML*PQPPVH
Trigger: ATGTACTGGGGGTTGAGGCCACAGCATCAGATGTTG...ATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAGAGTAAAGAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp AGGTTCTTTACTCTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATAGTCTCGTTTTCTTTTaGGAGTTCCTGGTCCACTCC +
Preference number: 4 (lower is better)
Translates to: RFFTLATPYFFGIVKRQDSLVFF*EFLVHS
Trigger: GGAGTGGACCAGGAACTCTCAAAAGAAAACGAGACT...ATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAGAGTAAAGAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp AGGTTCTTTACTCTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATGTGTTCCCTGGCAGTTaGAAGCAGATGGAATGGAAA +
Preference number: 4 (lower is better)
Translates to: RFFTLATPYFFGIVKRQDVFPGS*KQMEWK
Trigger: TTTCCATTCCATCTGCTTGCAACTGCCAGGGAACAC...ATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAGAGTAAAGAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AAGAGGGAAGATACAGGTTGCCAGTTATACATTTATAGAAAGATAATCCCCTGGGGCTCCCTCCTGAAATaGGTCAAGAAAGAAGATAGA +
Preference number: 4 (lower is better)
Translates to: KREDTGCQLYIYRKIIPWGSLLK*VKKEDR
Trigger: TCTATCTTCTTTCTTGACCCATTTCAGGAGGGAGCC...CCAGGGGATTATCTTTCTATAAATGTATAACTGGCAACCTGTATCTTCCCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357606.7
CDS-3UTR CCA 90 bp AGGTTCTTTACTCTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATGGCTCCCTCCTGAAATaGGTCAAGAAAGAAGATAGA +
Preference number: 4 (lower is better)
Translates to: RFFTLATPYFFGIVKRQDGSLLK*VKKEDR
Trigger: TCTATCTTCTTTCTTGACCCATTTCAGGAGGGAGCC...ATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAGAGTAAAGAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp AAGAGGGAAGATACAGGTTGCCAGTTATACATTTATAGAAAGATAATCCCCTGGAATCACTGGGGAACTTaGGAGATTCTTCATCATCAT +
Preference number: 4 (lower is better)
Translates to: KREDTGCQLYIYRKIIPWNHWGT*EILHHH
Trigger: ATGATGATGAAGAATCTCTCAAGTTCCCCAGTGATT...CCAGGGGATTATCTTTCTATAAATGTATAACTGGCAACCTGTATCTTCCCTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357606.7
CDS-3UTR CCA 90 bp AGGTTCTTTACTCTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATGGTCATCTTGCAGCTTaGACAGAAACTCATTTACTG +
Preference number: 4 (lower is better)
Translates to: RFFTLATPYFFGIVKRQDGHLAA*TETHLL
Trigger: CAGTAAATGAGTTTCTGTCCAAGCTGCAAGATGACC...ATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAGAGTAAAGAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CCA 90 bp AGGTTCTTTACTCTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATGTAGCTTTAAAAGGGTaGGAAAAAGTGTCATCTGCC +
Preference number: 4 (lower is better)
Translates to: RFFTLATPYFFGIVKRQDVALKG*EKVSSA
Trigger: GGCAGATGACACTTTTTCCCACCCTTTTAAAGCTAC...ATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAGAGTAAAGAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR TCA 90 bp AGGTTCTTTACTCTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATGATTTACCCACAAAGTaGAAGTCGAGGGAAAATTCA +
Preference number: 4 (lower is better)
Translates to: RFFTLATPYFFGIVKRQDDLPTK*KSRENS
Trigger: TGAATTTTCCCTCGACTTTCACTTTGTGGGTAAATC...ATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAGAGTAAAGAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR GCA 90 bp AGGTTCTTTACTCTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATAGGGAAGATACAGGTTaGCAGTTATACATTTATAGA +
Preference number: 4 (lower is better)
Translates to: RFFTLATPYFFGIVKRQDREDTG*QLYIYR
Trigger: TCTATAAATGTATAACTGGCAACCTGTATCTTCCCT...ATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAGAGTAAAGAACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357606.7
CDS GCA 90 bp GAGCTACGAGAGCCGCTCTCCCGGCTCCGCCTCCCGCTCACGCTCTaGTTCCGCCTTCCGTCCCCGCGGCCGCCGGCGACCTGGGCCTAC +
Preference number: 5 (lower is better)
Translates to: ELREPLSRLRLPLTL*FRLPSPRPPATWAY
Trigger: GTAGGCCCAGGTCGCCGGCGGCCGCGGGGACGGAAGGCGGAAGCAGAGCGTGAGCGGGAGGCGGAGCCGGGAGAGCGGCTCTCGTAGCTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357606.7
CDS CCA 90 bp ATGCCGAAGAACGGCGGTAACTCCTCCCCCTCGAGCCGCCCGGCCTaGGGCCAGGGTGAGCTACGAGAGCCGCTCTCCCGGCTCCGCCTC +
Preference number: 5 (lower is better)
Translates to: MPKNGGNSSPSSRPA*GQGELREPLSRLRL
Trigger: GAGGCGGAGCCGGGAGAGCGGCTCTCGTAGCTCACCCTGGCCCCAGGCCGGGCGGCTCGAGGGGGAGGAGTTACCGCCGTTCTTCGGCAT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357606.7
ENST00000678005.2
CDS CCA 90 bp GTACCGAAGAACGGCGGTAACTCCTCCCCCTCGAGCCGCCCGGCCTaGGGCCAGGGTGAGCTACGAGAGCCGCTCTCCCGGCTCCGCCTC +
Preference number: 5 (lower is better)
Translates to: VPKNGGNSSPSSRPA*GQGELREPLSRLRL
Trigger: GAGGCGGAGCCGGGAGAGCGGCTCTCGTAGCTCACCCTGGCCCCAGGCCGGGCGGCTCGAGGGGGAGGAGTTACCGCCGTTCTTCGGTAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546957.2
CDS CCA 90 bp CTCACGCTCTGCTTCCGCCTTCCGTCCCCGCGGCCGCCGGCGACCTaGGCCTACTTCCACTGCTATATAGTTGGGGGTCTCTGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: LTLCFRLPSPRPPAT*AYFHCYIVGGLWSW
Trigger: CCAGGACCAGAGACCCCCAACTATATAGCAGTGGAAGTAGGCCCAGGTCGCCGGCGGCCGCGGGGACGGAAGGCGGAAGCAGAGCGTGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357606.7
CDS GCA 90 bp ATCCGCCCCTCGGGTCGCAGCTCCCCAGGCCCGATCACCGAGCGGTaGCTAGGAACTGGGAGCGTAACTTGGCTCGGCTCAGAACTTTGC +
Preference number: 5 (lower is better)
Translates to: IRPSGRSSPGPITER*LGTGSVTWLGSELC
Trigger: GCAAAGTTCTGAGCCGAGCCAAGTTACGCTCCCAGTTCCTAGGCACCGCTCGGTGATCGGGCCTGGGGAGCTGCGACCCGAGGGGCGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317287.5
CDS GCA 90 bp CGCCTTCCGTCCCCGCGGCCGCCGGCGACCTGGGCCTACTTCCACTaGTATATAGTTGGGGGTCTCTGGTCCTGGACTAGAGCAGTAGGC +
Preference number: 5 (lower is better)
Translates to: RLPSPRPPATWAYFH*YIVGGLWSWTRAVG
Trigger: GCCTACTGCTCTAGTCCAGGACCAGAGACCCCCAACTATATAGCAGTGGAAGTAGGCCCAGGTCGCCGGCGGCCGCGGGGACGGAAGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357606.7
CDS CCA 90 bp GGGTCGCAGCTCCCCAGGCCCGATCACCGAGCGGTGCCTAGGAACTaGGAGCGTAACTTGGCTCGGCTCAGAACTTTGCCCGTGAGCCAA +
Preference number: 5 (lower is better)
Translates to: GSQLPRPDHRAVPRN*ERNLARLRTLPVSQ
Trigger: TTGGCTCACGGGCAAAGTTCTGAGCCGAGCCAAGTTACGCTCCCAGTTCCTAGGCACCGCTCGGTGATCGGGCCTGGGGAGCTGCGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317287.5
CDS CCA 90 bp GGGTCCACGGAGGGTCCTAAAGTCCTGAGGGAGGCACCACCACTGTaGTGGGCTCCATACAACCCTCTTTCTCCGGGGTGCTTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: GSTEGPKVLREAPPL*WAPYNPLSPGCFWA
Trigger: GGCCCAGAAGCACCCCGGAGAAAGAGGGTTGTATGGAGCCCACCACAGTGGTGGTGCCTCCCTCAGGACTTTAGGACCCTCCGTGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS CCA 90 bp ACTCTGATCAGGGTCCTCTGCATCTCTAGGTGGTCCTGGACCCCCTaGGGGGCCATGGCTTGGGTCCAACCAATGGGCTGGGTTTGGGTG +
Preference number: 5 (lower is better)
Translates to: TLIRVLCISRWSWTP*GAMAWVQPMGWVWV
Trigger: CACCCAAACCCAGCCCATTGGTTGGACCCAAGCCATGGCCCCCCAGGGGGTCCAGGACCACCTAGAGATGCAGAGGACCCTGATCAGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS CCA 90 bp GGACCTGGGATCCCTACGTCCACCCTCCCGAGTATCCTCCTTCGTTaGAAAGCGGTGCCGCTGTCTCCGGGATGGGGGTTTCTTTCCGCT +
Preference number: 5 (lower is better)
Translates to: GPGIPTSTLPSILLR*KAVPLSPGWGFLSA
Trigger: AGCGGAAAGAAACCCCCATCCCGGAGACAGCGGCACCGCTTTCCAACGAAGGAGGATACTCGGGAGGGTGGACGTAGGGATCCCAGGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS TCA 90 bp AGTTCCTCGGCTCCCCACAATCCCAGGCCTTTGCGCTTATCTGCCTaGCTTCGTTTCCGACCCAGCCGATGTCGACCAGGGGACCTGGGA +
Preference number: 5 (lower is better)
Translates to: SSSAPHNPRPLRLSA*LRFRPSRCRPGDLG
Trigger: TCCCAGGTCCCCTGGTCGACATCGGCTGGGTCGGAAACGAAGTCAGGCAGATAAGCGCAAAGGCCTGGGATTGTGGGGAGCCGAGGAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS CCA 90 bp TCCACGGAGGGTCCTAAAGTCCTGAGGGAGGCACCACCACTGTGGTaGGCTCCATACAACCCTCTTTCTCCGGGGTGCTTCTGGGCCATG +
Preference number: 5 (lower is better)
Translates to: STEGPKVLREAPPLW*APYNPLSPGCFWAM
Trigger: CATGGCCCAGAAGCACCCCGGAGAAAGAGGGTTGTATGGAGCCCACCACAGTGGTGGTGCCTCCCTCAGGACTTTAGGACCCTCCGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS CCA 90 bp CTGCCTGACTTCGTTTCCGACCCAGCCGATGTCGACCAGGGGACCTaGGATCCCTACGTCCACCCTCCCGAGTATCCTCCTTCGTTGGAA +
Preference number: 5 (lower is better)
Translates to: LPDFVSDPADVDQGT*DPYVHPPEYPPSLE
Trigger: TTCCAACGAAGGAGGATACTCGGGAGGGTGGACGTAGGGATCCCAGGTCCCCTGGTCGACATCGGCTGGGTCGGAAACGAAGTCAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS GCA 90 bp AACCAATGGGCTGGGTTTGGGTGCTGTGTGTGCTTAGGACCAGAGTaGTCTGTGAGGCAGCGGGTACCATTAGGAGCAGTCCCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: NQWAGFGCCVCLGPE*SVRQRVPLGAVPAE
Trigger: CTCAGCAGGGACTGCTCCTAATGGTACCCGCTGCCTCACAGAGCACTCTGGTCCTAAGCACACACAGCACCCAAACCCAGCCCATTGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS CCA 90 bp CAACTCCAGCCAGCCCCACTGAACTATTCTTACCAGCCGCTGCCATaGCCTGCTATCTCTCAGCAGAGTCAAGCAACGCTGCAAGGCTGG +
Preference number: 5 (lower is better)
Translates to: QLQPAPLNYSYQPLP*PAISQQSQATLQGW
Trigger: CCAGCCTTGCAGCGTTGCTTGACTCTGCTGAGAGATAGCAGGCCATGGCAGCGGCTGGTAAGAATAGTTCAGTGGGGCTGGCTGGAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp TACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTAGAGTATCCTCCTTCGTaGGAAAGCGGTGCCGCTGTC +
Preference number: 5 (lower is better)
Translates to: YPVPTPKGIHCPAQVQALEYPPS*ESGAAV
Trigger: GACAGCGGCACCGCTTTCCAACGAAGGAGGATACTC...TAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp GAACCCCCGTATTCTTCCCCCTCACCCAAGGGCAGTGGGCATGAATCTACTTTTGCTGCTCGCAAAACCTaGAAGGCCTCCTCAGCCCGG +
Preference number: 5 (lower is better)
Translates to: EPPYSSPSPKGSGHESTFAARKT*KASSAR
Trigger: CCGGGCTGAGGAGGCCTTCAAGGTTTTGCGAGCAGC...AAAAGTAGATTCATGCCCACTGCCCTTGGGTGAGGGGGAAGAATACGGGGGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp TACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTATTGGGTACTGTGCTGTaGGGCTTAGAGGCTGCAGCG +
Preference number: 5 (lower is better)
Translates to: YPVPTPKGIHCPAQVQALLGTVL*GLEAAA
Trigger: CGCTGCAGCCTCTAAGCCCAACAGCACAGTACCCAA...TAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS TCA 90 bp GGTGGCTCTCTGCCGCCCTCTGGTGCCTGGAATCCGAGAACCAAATaGGATGTGATAGGGGACTCTGTGGGTATCTGGGGAGATACCTAC +
Preference number: 5 (lower is better)
Translates to: GGSLPPSGAWNPRTK*DVIGDSVGIWGDTY
Trigger: GTAGGTATCTCCCCAGATACCCACAGAGTCCCCTATCACATCTCATTTGGTTCTCGGATTCCAGGCACCAGAGGGCGGCAGAGAGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS GCA 90 bp GTCCAAGTTGACATAGTTCCTCGGCTCCCCACAATCCCAGGCCTTTaGGCTTATCTGCCTGACTTCGTTTCCGACCCAGCCGATGTCGAC +
Preference number: 5 (lower is better)
Translates to: VQVDIVPRLPTIPGL*AYLPDFVSDPADVD
Trigger: GTCGACATCGGCTGGGTCGGAAACGAAGTCAGGCAGATAAGCGCAAAGGCCTGGGATTGTGGGGAGCCGAGGAACTATGTCAACTTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS GCA 90 bp AGCCGCTGCCATGGCCTGCTATCTCTCAGCAGAGTCAAGCAACGCTaGAAGGCTGGAGAATCCAGCCAAGAGAAGAGCCAGGTAGCCTTA +
Preference number: 5 (lower is better)
Translates to: SRCHGLLSLSRVKQR*KAGESSQEKSQVAL
Trigger: TAAGGCTACCTGGCTCTTCTCTTGGCTGGATTCTCCAGCCTTGCAGCGTTGCTTGACTCTGCTGAGAGATAGCAGGCCATGGCAGCGGCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS GCA 90 bp CCAGCCAGCCCCACTGAACTATTCTTACCAGCCGCTGCCATGGCCTaGTATCTCTCAGCAGAGTCAAGCAACGCTGCAAGGCTGGAGAAT +
Preference number: 5 (lower is better)
Translates to: PASPTELFLPAAAMA*YLSAESSNAARLEN
Trigger: ATTCTCCAGCCTTGCAGCGTTGCTTGACTCTGCTGAGAGATAGCAGGCCATGGCAGCGGCTGGTAAGAATAGTTCAGTGGGGCTGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACCCCATGAACCCCCAGTaGGCGCTCCCCGACCAGCAA +
Preference number: 5 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDPMNPQ*ALPDQQ
Trigger: TTGCTGGTCGGGGAGCGCCAACTGGGGGTTCATGGG...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000317287.5
CDS-3UTR CAA 90 bp CCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCGCAAAGAAGTTCCCATaGGGCATCTGCCCTGGGGGT +
Preference number: 5 (lower is better)
Translates to: PGKYPVPTPKGIHCPAQVAKKFP*GICPGG
Trigger: ACCCCCAGGGCAGATGCCCAATGGGAACTTCTTTGC...GACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp CCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCGGTTTGGCTTCTCCCTaGGGTACTGTGCTGTTGGGC +
Preference number: 5 (lower is better)
Translates to: PGKYPVPTPKGIHCPAQVGLASP*GTVLLG
Trigger: GCCCAACAGCACAGTACCCAAGGGAGAAGCCAAACC...GACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp TACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTAGAAGGGGCATCAACGTaGGAAGGGCCTCCTCACTTT +
Preference number: 5 (lower is better)
Translates to: YPVPTPKGIHCPAQVQALEGAST*EGPPHF
Trigger: AAAGTGAGGAGGCCCTTCCAACGTTGATGCCCCTTC...TAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS CCA 90 bp CCATGGCCTGCTATCTCTCAGCAGAGTCAAGCAACGCTGCAAGGCTaGAGAATCCAGCCAAGAGAAGAGCCAGGTAGCCTTATCCCTCCA +
Preference number: 5 (lower is better)
Translates to: PWPAISQQSQATLQG*RIQPREEPGSLIPP
Trigger: TGGAGGGATAAGGCTACCTGGCTCTTCTCTTGGCTGGATTCTCCAGCCTTGCAGCGTTGCTTGACTCTGCTGAGAGATAGCAGGCCATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp ACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTAGGTTCTTTACTCGAGTATCCTCCTTCGTaGGAAAGCGGTGCCGCTGTC +
Preference number: 5 (lower is better)
Translates to: TPKGIHCPAQVQALGSLLEYPPS*ESGAAV
Trigger: GACAGCGGCACCGCTTTCCAACGAAGGAGGATACTC...GAGTAAAGAACCTAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACGCTGCTCGCAAAACCTaGAAGGCCTCCTCAGCCCGG +
Preference number: 5 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDAARKT*KASSAR
Trigger: CCGGGCTGAGGAGGCCTTCAAGGTTTTGCGAGCAGC...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp GAACCCCCGTATTCTTCCCCCTCACCCAAGGGCAGTGGGCATGAATCTACTTTTTTGGGTACTGTGCTGTaGGGCTTAGAGGCTGCAGCG +
Preference number: 5 (lower is better)
Translates to: EPPYSSPSPKGSGHESTFLGTVL*GLEAAA
Trigger: CGCTGCAGCCTCTAAGCCCAACAGCACAGTACCCAA...AAAAGTAGATTCATGCCCACTGCCCTTGGGTGAGGGGGAAGAATACGGGGGTTC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp CAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCCTGCCCTGGGGGTACTaGAAAGATCCGACTCAAGAA +
Preference number: 5 (lower is better)
Translates to: QGNTQFPHLKGYTVQPRSLPWGY*KDPTQE
Trigger: TTCTTGAGTCGGATCTTTCAAGTACCCCCAGGGCAG...GGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp AAATACAAACCCTTGGATCACATGGGGGCTTCTGGGAACCCCCGTATTCTTCCCGGTTTGGCTTCTCCCTaGGGTACTGTGCTGTTGGGC +
Preference number: 5 (lower is better)
Translates to: KYKPLDHMGASGNPRILPGLASP*GTVLLG
Trigger: GCCCAACAGCACAGTACCCAAGGGAGAAGCCAAACC...GGGAAGAATACGGGGGTTCCCAGAAGCCCCCATGTGATCCAAGGGTTTGTATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp ACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTAGGTTCTTTACTCTTCCGCCGCTTAGGTTaGGCTTCTCCCTTGGGTACT +
Preference number: 5 (lower is better)
Translates to: TPKGIHCPAQVQALGSLLFRRLG*ASPLGT
Trigger: AGTACCCAAGGGAGAAGCCAAACCTAAGCGGCGGAA...GAGTAAAGAACCTAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp CCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCAGATGGGAGAATTGCTaGAACCCGGGAGACAGAGGT +
Preference number: 5 (lower is better)
Translates to: PGKYPVPTPKGIHCPAQVRWENC*NPGDRG
Trigger: ACCTCTGTCTCCCGGGTTCAAGCAATTCTCCCATCT...GACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp ACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTAGGTTCTTTACTCGCTGAGATGGGAGAATaGCTTGAACCCGGGAGACAG +
Preference number: 5 (lower is better)
Translates to: TPKGIHCPAQVQALGSLLAEMGE*LEPGRQ
Trigger: CTGTCTCCCGGGTTCAAGCAATTCTCCCATCTCAGC...GAGTAAAGAACCTAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp TACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTACAGTCTCGTTTTCTTTaGAGAGTTCCTGGTCCACTC +
Preference number: 5 (lower is better)
Translates to: YPVPTPKGIHCPAQVQALQSRFL*RVPGPL
Trigger: GAGTGGACCAGGAACTCTCAAAAGAAAACGAGACTG...TAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACGAGTATCCTCCTTCGTaGGAAAGCGGTGCCGCTGTC +
Preference number: 5 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDEYPPS*ESGAAV
Trigger: GACAGCGGCACCGCTTTCCAACGAAGGAGGATACTC...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp TACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTAATCACTGCTTTTCAGTaGCCTGCAGGCATAGATGAG +
Preference number: 5 (lower is better)
Translates to: YPVPTPKGIHCPAQVQALITAFQ*PAGIDE
Trigger: CTCATCTATGCCTGCAGGCAACTGAAAAGCAGTGAT...TAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp CAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCCTCCTTGAGGTCATCTaGCAGCTTGGACAGAAACTC +
Preference number: 5 (lower is better)
Translates to: QGNTQFPHLKGYTVQPRSLLEVI*QLGQKL
Trigger: GAGTTTCTGTCCAAGCTGCAAGATGACCTCAAGGAG...GGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp CCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCTCCTTGAGGTCATCTaGCAGCTTGGACAGAAACTC +
Preference number: 5 (lower is better)
Translates to: PGKYPVPTPKGIHCPAQVLLEVI*QLGQKL
Trigger: GAGTTTCTGTCCAAGCTGCAAGATGACCTCAAGGAG...GACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp GAACCCCCGTATTCTTCCCCCTCACCCAAGGGCAGTGGGCATGAATCTACTTTTCTGCCCTGGGGGTACTaGAAAGATCCGACTCAAGAA +
Preference number: 5 (lower is better)
Translates to: EPPYSSPSPKGSGHESTFLPWGY*KDPTQE
Trigger: TTCTTGAGTCGGATCTTTCAAGTACCCCCAGGGCAG...AAAAGTAGATTCATGCCCACTGCCCTTGGGTGAGGGGGAAGAATACGGGGGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGCAAAGAAGTTCCCATaGGGCATCTGCCCTGGGGGT +
Preference number: 5 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFAKKFP*GICPGG
Trigger: ACCCCCAGGGCAGATGCCCAATGGGAACTTCTTTGC...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp GCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCCCACACGCAAAGAAGTTCCCATaGGGCATCTGCCCTGGGGGT +
Preference number: 5 (lower is better)
Translates to: ANDKTKAYRPQGNTQFPHAKKFP*GICPGG
Trigger: ACCCCCAGGGCAGATGCCCAATGGGAACTTCTTTGC...GTGTGGGAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACTTGGGTACTGTGCTGTaGGGCTTAGAGGCTGCAGCG +
Preference number: 5 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDLGTVL*GLEAAA
Trigger: CGCTGCAGCCTCTAAGCCCAACAGCACAGTACCCAA...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGGTTTGGCTTCTCCCTaGGGTACTGTGCTGTTGGGC +
Preference number: 5 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFGLASP*GTVLLG
Trigger: GCCCAACAGCACAGTACCCAAGGGAGAAGCCAAACC...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp GCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCCCACACGGTTTGGCTTCTCCCTaGGGTACTGTGCTGTTGGGC +
Preference number: 5 (lower is better)
Translates to: ANDKTKAYRPQGNTQFPHGLASP*GTVLLG
Trigger: GCCCAACAGCACAGTACCCAAGGGAGAAGCCAAACC...GTGTGGGAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS TCA 90 bp AATACCAGCAGTTCAATCAGCCACCAAAAGCCTGCCTGTCCAAGTTaGCATAGTTCCTCGGCTCCCCACAATCCCAGGCCTTTGCGCTTA +
Preference number: 5 (lower is better)
Translates to: NTSSSISHQKPACPS*HSSSAPHNPRPLRL
Trigger: TAAGCGCAAAGGCCTGGGATTGTGGGGAGCCGAGGAACTATGTCAACTTGGACAGGCAGGCTTTTGGTGGCTGATTGAACTGCTGGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACGCTCGGCTCAGAACTTaGCCCGTGAGCCAAAGAACA +
Preference number: 5 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDARLRT*PVSQRT
Trigger: TGTTCTTTGGCTCACGGGCAAAGTTCTGAGCCGAGC...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317287.5
CDS-3UTR CAA 90 bp CAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCCAGTCTCGTTTTCTTTaGAGAGTTCCTGGTCCACTC +
Preference number: 5 (lower is better)
Translates to: QGNTQFPHLKGYTVQPRSQSRFL*RVPGPL
Trigger: GAGTGGACCAGGAACTCTCAAAAGAAAACGAGACTG...GGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp TACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTACTATTAATATTCTGCTaGACCCAAGGCAACTCCAGC +
Preference number: 5 (lower is better)
Translates to: YPVPTPKGIHCPAQVQALLLIFC*TQGNSS
Trigger: GCTGGAGTTGCCTTGGGTCAAGCAGAATATTAATAG...TAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp CCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCGTATTCATTGCCTCCTaGAGGTCATCTTGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: PGKYPVPTPKGIHCPAQVVFIAS*RSSCSL
Trigger: CAAGCTGCAAGATGACCTCAAGGAGGCAATGAATAC...GACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp ACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTAGGTTCTTTACTCCCTCCTATGCTTTCCTaGGCATCGGCTACACATCAT +
Preference number: 5 (lower is better)
Translates to: TPKGIHCPAQVQALGSLLPPMLS*ASATHH
Trigger: ATGATGTGTAGCCGATGCCAAGGAAAGCATAGGAGG...GAGTAAAGAACCTAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp AAATACAAACCCTTGGATCACATGGGGGCTTCTGGGAACCCCCGTATTCTTCCCCTGCCCTGGGGGTACTaGAAAGATCCGACTCAAGAA +
Preference number: 5 (lower is better)
Translates to: KYKPLDHMGASGNPRILPLPWGY*KDPTQE
Trigger: TTCTTGAGTCGGATCTTTCAAGTACCCCCAGGGCAG...GGGAAGAATACGGGGGTTCCCAGAAGCCCCCATGTGATCCAAGGGTTTGTATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACTTCCGCCGCTTAGGTTaGGCTTCTCCCTTGGGTACT +
Preference number: 5 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDFRRLG*ASPLGT
Trigger: AGTACCCAAGGGAGAAGCCAAACCTAAGCGGCGGAA...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp ATACAGACCCCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCATTCCGCCGCTTAGGTTaGGCTTCTCCCTTGGGTACT +
Preference number: 5 (lower is better)
Translates to: IQTPGKYPVPTPKGIHCPFRRLG*ASPLGT
Trigger: AGTACCCAAGGGAGAAGCCAAACCTAAGCGGCGGAA...TGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGGGGTCTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACGAAGGGGCATCAACGTaGGAAGGGCCTCCTCACTTT +
Preference number: 5 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDEGAST*EGPPHF
Trigger: AAAGTGAGGAGGCCCTTCCAACGTTGATGCCCCTTC...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGCTGAGATGGGAGAATaGCTTGAACCCGGGAGACAG +
Preference number: 5 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFAEMGE*LEPGRQ
Trigger: CTGTCTCCCGGGTTCAAGCAATTCTCCCATCTCAGC...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS GCA 90 bp CCCAACATGCTTGACTCTGCCCAAAAGTCTCCTTCCTCAGCAGGATaGAGCCTATTACACTCAGCACAGTATCTGGCACTCTTAGGTTCC +
Preference number: 5 (lower is better)
Translates to: PNMLDSAQKSPSSAG*SLLHSAQYLALLGS
Trigger: GGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGGCTGCATCCTGCTGAGGAAGGAGACTTTTGGGCAGAGTCAAGCATGTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS CCA 90 bp TTCTTCAGTTCAACATCTGATGCTGTGGCCTCAACCCCCAGTACATaGAAAGGGTTTAGCTCATCCTCAGGAACCCCAGCCATGGTCAAG +
Preference number: 5 (lower is better)
Translates to: FFSSTSDAVASTPST*KGFSSSSGTPAMVK
Trigger: CTTGACCATGGCTGGGGTTCCTGAGGATGAGCTAAACCCTTTCCATGTACTGGGGGTTGAGGCCACAGCATCAGATGTTGAACTGAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS CCA 90 bp CTGCCAGCTGTCTATAGGCCTTCTTCAGTTCAACATCTGATGCTGTaGCCTCAACCCCCAGTACATGGAAAGGGTTTAGCTCATCCTCAG +
Preference number: 5 (lower is better)
Translates to: LPAVYRPSSVQHLML*PQPPVHGKGLAHPQ
Trigger: CTGAGGATGAGCTAAACCCTTTCCATGTACTGGGGGTTGAGGCCACAGCATCAGATGTTGAACTGAAGAAGGCCTATAGACAGCTGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTTGCATACCAAGCTATTaGGTGGACGTCCACAAGCGC +
Preference number: 5 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFCIPSY*VDVHKR
Trigger: GCGCTTGTGGACGTCCACCAAATAGCTTGGTATGCA...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000317287.5
CDS-3UTR CAA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACAACTGGGAGCGTAACTaGGCTCGGCTCAGAACTTTG +
Preference number: 5 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDNWERN*ARLRTL
Trigger: CAAAGTTCTGAGCCGAGCCAAGTTACGCTCCCAGTT...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317287.5
CDS-3UTR CAA 90 bp ACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTAGGTTCTTTACTCCAGTCTCGTTTTCTTTaGAGAGTTCCTGGTCCACTC +
Preference number: 5 (lower is better)
Translates to: TPKGIHCPAQVQALGSLLQSRFL*RVPGPL
Trigger: GAGTGGACCAGGAACTCTCAAAAGAAAACGAGACTG...GAGTAAAGAACCTAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp ACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTAGGTTCTTTACTCATCACTGCTTTTCAGTaGCCTGCAGGCATAGATGAG +
Preference number: 5 (lower is better)
Translates to: TPKGIHCPAQVQALGSLLITAFQ*PAGIDE
Trigger: CTCATCTATGCCTGCAGGCAACTGAAAAGCAGTGAT...GAGTAAAGAACCTAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp CAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCCTATTAATATTCTGCTaGACCCAAGGCAACTCCAGC +
Preference number: 5 (lower is better)
Translates to: QGNTQFPHLKGYTVQPRSLLIFC*TQGNSS
Trigger: GCTGGAGTTGCCTTGGGTCAAGCAGAATATTAATAG...GGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp CCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCTATTAATATTCTGCTaGACCCAAGGCAACTCCAGC +
Preference number: 5 (lower is better)
Translates to: PGKYPVPTPKGIHCPAQVLLIFC*TQGNSS
Trigger: GCTGGAGTTGCCTTGGGTCAAGCAGAATATTAATAG...GACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp GAACCCCCGTATTCTTCCCCCTCACCCAAGGGCAGTGGGCATGAATCTACTTTTGTATTCATTGCCTCCTaGAGGTCATCTTGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: EPPYSSPSPKGSGHESTFVFIAS*RSSCSL
Trigger: CAAGCTGCAAGATGACCTCAAGGAGGCAATGAATAC...AAAAGTAGATTCATGCCCACTGCCCTTGGGTGAGGGGGAAGAATACGGGGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTCTGCCCTGGGGGTACTaGAAAGATCCGACTCAAGAA +
Preference number: 5 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFLPWGY*KDPTQE
Trigger: TTCTTGAGTCGGATCTTTCAAGTACCCCCAGGGCAG...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACAGATGGGAGAATTGCTaGAACCCGGGAGACAGAGGT +
Preference number: 5 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDRWENC*NPGDRG
Trigger: ACCTCTGTCTCCCGGGTTCAAGCAATTCTCCCATCT...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS TCA 90 bp TCCATCCATCAGTGCAAAGTAGGTGATCTTGAGGCCCAACATGCTTaGCTCTGCCCAAAAGTCTCCTTCCTCAGCAGGATGCAGCCTATT +
Preference number: 5 (lower is better)
Translates to: SIHQCKVGDLEAQHA*LCPKVSFLSRMQPI
Trigger: AATAGGCTGCATCCTGCTGAGGAAGGAGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAGATCACCTACTTTGCACTGATGGATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS TCA 90 bp AACTCCATCCTGTGCTACAGCCCTTTTGACTCCCTGACATTGATTTaGGGAAAGAGAAGGGGCATCAACGTTGGAAGGGCCTCCTCACTT +
Preference number: 5 (lower is better)
Translates to: NSILCYSPFDSLTLI*GKRRGINVGRASSL
Trigger: AAGTGAGGAGGCCCTTCCAACGTTGATGCCCCTTCTCTTTCCTCAAATCAATGTCAGGGAGTCAAAAGGGCTGTAGCACAGGATGGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp GAACCCCCGTATTCTTCCCCCTCACCCAAGGGCAGTGGGCATGAATCTACTTTTCAGTGGTGGCAAAAGTaGCTAGAAGAACCATTTCCT +
Preference number: 5 (lower is better)
Translates to: EPPYSSPSPKGSGHESTFQWWQK*LEEPFP
Trigger: AGGAAATGGTTCTTCTAGCAACTTTTGCCACCACTG...AAAAGTAGATTCATGCCCACTGCCCTTGGGTGAGGGGGAAGAATACGGGGGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp ACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAGGCCCTAGGTTCTTTACTCCAGTGGTGGCAAAAGTaGCTAGAAGAACCATTTCCT +
Preference number: 5 (lower is better)
Translates to: TPKGIHCPAQVQALGSLLQWWQK*LEEPFP
Trigger: AGGAAATGGTTCTTCTAGCAACTTTTGCCACCACTG...GAGTAAAGAACCTAGGGCCTGGACCTGGGCTGGACAGTGTATCCCTTTAGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTCTCCTTGAGGTCATCTaGCAGCTTGGACAGAAACTC +
Preference number: 5 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFLLEVI*QLGQKL
Trigger: GAGTTTCTGTCCAAGCTGCAAGATGACCTCAAGGAG...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACCTCCTTGAGGTCATCTaGCAGCTTGGACAGAAACTC +
Preference number: 5 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDLLEVI*QLGQKL
Trigger: GAGTTTCTGTCCAAGCTGCAAGATGACCTCAAGGAG...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACCCTCCTATGCTTTCCTaGGCATCGGCTACACATCAT +
Preference number: 5 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDPPMLS*ASATHH
Trigger: ATGATGTGTAGCCGATGCCAAGGAAAGCATAGGAGG...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp GCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCCCACACCCTCCTATGCTTTCCTaGGCATCGGCTACACATCAT +
Preference number: 5 (lower is better)
Translates to: ANDKTKAYRPQGNTQFPHPPMLS*ASATHH
Trigger: ATGATGTGTAGCCGATGCCAAGGAAAGCATAGGAGG...GTGTGGGAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp CTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATTCAGGCCGGGCAGAAGGGGCATCAACGTaGGAAGGGCCTCCTCACTTT +
Preference number: 5 (lower is better)
Translates to: LATPYFFGIVKRQDSGRAEGAST*EGPPHF
Trigger: AAAGTGAGGAGGCCCTTCCAACGTTGATGCCCCTTC...TGCCCGGCCTGAATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp CTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATTCAGGCCGGGCAGCTGAGATGGGAGAATaGCTTGAACCCGGGAGACAG +
Preference number: 5 (lower is better)
Translates to: LATPYFFGIVKRQDSGRAAEMGE*LEPGRQ
Trigger: CTGTCTCCCGGGTTCAAGCAATTCTCCCATCTCAGC...TGCCCGGCCTGAATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS CCA 90 bp AAAGTTGCTAGAAGAACCATTTCCTCCCTCAGAGTAAGGCCCTTCTaGAATTCCAGGTGTTCCCTGGCAGTTGCAAGCAGATGGAATGGA +
Preference number: 5 (lower is better)
Translates to: KVARRTISSLRVRPF*NSRCSLAVASRWNG
Trigger: TCCATTCCATCTGCTTGCAACTGCCAGGGAACACCTGGAATTCCAGAAGGGCCTTACTCTGAGGGAGGAAATGGTTCTTCTAGCAACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACGCCTTATACCCCGTCTaGATCCGAAAGTTTTTCCAC +
Preference number: 5 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDALYPV*IRKFFH
Trigger: GTGGAAAAACTTTCGGATCAAGACGGGGTATAAGGC...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000317287.5
CDS-3UTR CAA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACCAGTCTCGTTTTCTTTaGAGAGTTCCTGGTCCACTC +
Preference number: 5 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDQSRFL*RVPGPL
Trigger: GAGTGGACCAGGAACTCTCAAAAGAAAACGAGACTG...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp GCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCCCACACCAGTCTCGTTTTCTTTaGAGAGTTCCTGGTCCACTC +
Preference number: 5 (lower is better)
Translates to: ANDKTKAYRPQGNTQFPHQSRFL*RVPGPL
Trigger: GAGTGGACCAGGAACTCTCAAAAGAAAACGAGACTG...GTGTGGGAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp CAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCAAATCACTGGGGAACTaGAGAGATTCTTCATCATCA +
Preference number: 5 (lower is better)
Translates to: QGNTQFPHLKGYTVQPRSKSLGN*RDSSSS
Trigger: TGATGATGAAGAATCTCTCAAGTTCCCCAGTGATTT...GGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTATCACTGCTTTTCAGTaGCCTGCAGGCATAGATGAG +
Preference number: 5 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFITAFQ*PAGIDE
Trigger: CTCATCTATGCCTGCAGGCAACTGAAAAGCAGTGAT...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp ATACAGACCCCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAATCACTGCTTTTCAGTaGCCTGCAGGCATAGATGAG +
Preference number: 5 (lower is better)
Translates to: IQTPGKYPVPTPKGIHCPITAFQ*PAGIDE
Trigger: CTCATCTATGCCTGCAGGCAACTGAAAAGCAGTGAT...TGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGGGGTCTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp AAGAGGGAAGATACAGGTTGCCAGTTATACATTTATAGAAAGATAATCCCCTGGGCTGCTCGCAAAACCTaGAAGGCCTCCTCAGCCCGG +
Preference number: 5 (lower is better)
Translates to: KREDTGCQLYIYRKIIPWAARKT*KASSAR
Trigger: CCGGGCTGAGGAGGCCTTCAAGGTTTTGCGAGCAGC...CCAGGGGATTATCTTTCTATAAATGTATAACTGGCAACCTGTATCTTCCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357606.7
CDS-3UTR CAA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGTATTCATTGCCTCCTaGAGGTCATCTTGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFVFIAS*RSSCSL
Trigger: CAAGCTGCAAGATGACCTCAAGGAGGCAATGAATAC...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp CAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAGCCCAGGTCCGAAAAGAGCCTAAAATaGGGTGATTTACCCACAAAG +
Preference number: 5 (lower is better)
Translates to: QGNTQFPHLKGYTVQPRSEKSLK*GDLPTK
Trigger: CTTTGTGGGTAAATCACCCAATTTTAGGCTCTTTTC...GGACCTGGGCTGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS GCA 90 bp AGAACTTTGCCCGTGAGCCAAAGAACACTGAACTCATCTACCTGCTaGTTGACATCTCATCTGCATACCAAGCTATTTGGTGGACGTCCA +
Preference number: 5 (lower is better)
Translates to: RTLPVSQRTLNSSTC*LTSHLHTKLFGGRP
Trigger: TGGACGTCCACCAAATAGCTTGGTATGCAGATGAGATGTCAAGCAGCAGGTAGATGAGTTCAGTGTTCTTTGGCTCACGGGCAAAGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317287.5
CDS GCA 90 bp CTCAGAACTTTGCCCGTGAGCCAAAGAACACTGAACTCATCTACCTaGTGCTTGACATCTCATCTGCATACCAAGCTATTTGGTGGACGT +
Preference number: 5 (lower is better)
Translates to: LRTLPVSQRTLNSST*CLTSHLHTKLFGGR
Trigger: ACGTCCACCAAATAGCTTGGTATGCAGATGAGATGTCAAGCAGCAGGTAGATGAGTTCAGTGTTCTTTGGCTCACGGGCAAAGTTCTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317287.5
CDS-3UTR CAA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTCAGTGGTGGCAAAAGTaGCTAGAAGAACCATTTCCT +
Preference number: 5 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFQWWQK*LEEPFP
Trigger: AGGAAATGGTTCTTCTAGCAACTTTTGCCACCACTG...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp TGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTGACCAGTGGTGGCAAAAGTaGCTAGAAGAACCATTTCCT +
Preference number: 5 (lower is better)
Translates to: CWGRRDKSNSILCYSPFDQWWQK*LEEPFP
Trigger: AGGAAATGGTTCTTCTAGCAACTTTTGCCACCACTG...GTCAAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTCTATTAATATTCTGCTaGACCCAAGGCAACTCCAGC +
Preference number: 5 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFLLIFC*TQGNSS
Trigger: GCTGGAGTTGCCTTGGGTCAAGCAGAATATTAATAG...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp AGGTTCTTTACTCTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATGCTGCTCGCAAAACCTaGAAGGCCTCCTCAGCCCGG +
Preference number: 5 (lower is better)
Translates to: RFFTLATPYFFGIVKRQDAARKT*KASSAR
Trigger: CCGGGCTGAGGAGGCCTTCAAGGTTTTGCGAGCAGC...ATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAGAGTAAAGAACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp CTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATTCAGGCCGGGCACCTCCTATGCTTTCCTaGGCATCGGCTACACATCAT +
Preference number: 5 (lower is better)
Translates to: LATPYFFGIVKRQDSGRAPPMLS*ASATHH
Trigger: ATGATGTGTAGCCGATGCCAAGGAAAGCATAGGAGG...TGCCCGGCCTGAATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp CTAAAAGCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCCTGCCCTGGGGGTACTaGAAAGATCCGACTCAAGAA +
Preference number: 5 (lower is better)
Translates to: LKANDKTKAYRPQGNTQFLPWGY*KDPTQE
Trigger: TTCTTGAGTCGGATCTTTCAAGTACCCCCAGGGCAG...GAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGCTTTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp GAACCCCCGTATTCTTCCCCCTCACCCAAGGGCAGTGGGCATGAATCTACTTTTGAAAAGAGCCTAAAATaGGGTGATTTACCCACAAAG +
Preference number: 5 (lower is better)
Translates to: EPPYSSPSPKGSGHESTFEKSLK*GDLPTK
Trigger: CTTTGTGGGTAAATCACCCAATTTTAGGCTCTTTTC...AAAAGTAGATTCATGCCCACTGCCCTTGGGTGAGGGGGAAGAATACGGGGGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS TCA 90 bp GAAAAAGGTCCAAATCACTGCTTTTCAGTTGCCTGCAGGCATAGATaGGATGGCCACAAGTTTCTACGTACTCTCCCACCAATACCAGCA +
Preference number: 5 (lower is better)
Translates to: EKGPNHCFSVACRHR*DGHKFLRTLPPIPA
Trigger: TGCTGGTATTGGTGGGAGAGTACGTAGAAACTTGTGGCCATCTCATCTATGCCTGCAGGCAACTGAAAAGCAGTGATTTGGACCTTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS GCA 90 bp CATCGGCTACACATCATAGTATTCATTGCCTCCTTGAGGTCATCTTaGAGCTTGGACAGAAACTCATTTACTGACCGGCTCAGCTCATTC +
Preference number: 5 (lower is better)
Translates to: HRLHIIVFIASLRSS*SLDRNSFTDRLSSF
Trigger: GAATGAGCTGAGCCGGTCAGTAAATGAGTTTCTGTCCAAGCTGCAAGATGACCTCAAGGAGGCAATGAATACTATGATGTGTAGCCGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp CTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATTCAGGCCGGGCAATCACTGCTTTTCAGTaGCCTGCAGGCATAGATGAG +
Preference number: 5 (lower is better)
Translates to: LATPYFFGIVKRQDSGRAITAFQ*PAGIDE
Trigger: CTCATCTATGCCTGCAGGCAACTGAAAAGCAGTGAT...TGCCCGGCCTGAATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS GCA 90 bp CCTCCTATGCTTTCCTTGGCATCGGCTACACATCATAGTATTCATTaGCTCCTTGAGGTCATCTTGCAGCTTGGACAGAAACTCATTTAC +
Preference number: 5 (lower is better)
Translates to: PPMLSLASATHHSIH*LLEVILQLGQKLIY
Trigger: GTAAATGAGTTTCTGTCCAAGCTGCAAGATGACCTCAAGGAGGCAATGAATACTATGATGTGTAGCCGATGCCAAGGAAAGCATAGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp AGGTGTTGGGGGAGGAGGGATAAATCAAACTCCATCCTGTGCTACAGCCCTTTTAAATCACTGGGGAACTaGAGAGATTCTTCATCATCA +
Preference number: 5 (lower is better)
Translates to: RCWGRRDKSNSILCYSPFKSLGN*RDSSSS
Trigger: TGATGATGAAGAATCTCTCAAGTTCCCCAGTGATTT...AAAAGGGCTGTAGCACAGGATGGAGTTTGATTTATCCCTCCTCCCCCAACACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp GCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCCCACACAAATCACTGGGGAACTaGAGAGATTCTTCATCATCA +
Preference number: 5 (lower is better)
Translates to: ANDKTKAYRPQGNTQFPHKSLGN*RDSSSS
Trigger: TGATGATGAAGAATCTCTCAAGTTCCCCAGTGATTT...GTGTGGGAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp ATACAGACCCCAGGGAAATACCCAGTTCCCACACCTAAAGGGATACACTGTCCAAAATCACTGGGGAACTaGAGAGATTCTTCATCATCA +
Preference number: 5 (lower is better)
Translates to: IQTPGKYPVPTPKGIHCPKSLGN*RDSSSS
Trigger: TGATGATGAAGAATCTCTCAAGTTCCCCAGTGATTT...TGGACAGTGTATCCCTTTAGGTGTGGGAACTGGGTATTTCCCTGGGGTCTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp AGGTTCTTTACTCTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATGAGTATCCTCCTTCGTaGGAAAGCGGTGCCGCTGTC +
Preference number: 5 (lower is better)
Translates to: RFFTLATPYFFGIVKRQDEYPPS*ESGAAV
Trigger: GACAGCGGCACCGCTTTCCAACGAAGGAGGATACTC...ATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAGAGTAAAGAACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp AGGTTCTTTACTCTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATGCAAAGAAGTTCCCATaGGGCATCTGCCCTGGGGGT +
Preference number: 5 (lower is better)
Translates to: RFFTLATPYFFGIVKRQDAKKFP*GICPGG
Trigger: ACCCCCAGGGCAGATGCCCAATGGGAACTTCTTTGC...ATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAGAGTAAAGAACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp AGGTTCTTTACTCTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATGAAGGGGCATCAACGTaGGAAGGGCCTCCTCACTTT +
Preference number: 5 (lower is better)
Translates to: RFFTLATPYFFGIVKRQDEGAST*EGPPHF
Trigger: AAAGTGAGGAGGCCCTTCCAACGTTGATGCCCCTTC...ATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAGAGTAAAGAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp AGGTTCTTTACTCTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATCCTCCTATGCTTTCCTaGGCATCGGCTACACATCAT +
Preference number: 5 (lower is better)
Translates to: RFFTLATPYFFGIVKRQDPPMLS*ASATHH
Trigger: ATGATGTGTAGCCGATGCCAAGGAAAGCATAGGAGG...ATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAGAGTAAAGAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp CTAAAAGCAAATGACAAGACAAAGGCATACAGACCCCAGGGAAATACCCAGTTCGAAAAGAGCCTAAAATaGGGTGATTTACCCACAAAG +
Preference number: 5 (lower is better)
Translates to: LKANDKTKAYRPQGNTQFEKSLK*GDLPTK
Trigger: CTTTGTGGGTAAATCACCCAATTTTAGGCTCTTTTC...GAACTGGGTATTTCCCTGGGGTCTGTATGCCTTTGTCTTGTCATTTGCTTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp AGGTTCTTTACTCTAGCTACCCCCTATTTCTTTGGTATTGTCAAAAGACAAGATGTATTCATTGCCTCCTaGAGGTCATCTTGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: RFFTLATPYFFGIVKRQDVFIAS*RSSCSL
Trigger: CAAGCTGCAAGATGACCTCAAGGAGGCAATGAATAC...ATCTTGTCTTTTGACAATACCAAAGAAATAGGGGGTAGCTAGAGTAAAGAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS-3UTR CAA 90 bp AAGAGGGAAGATACAGGTTGCCAGTTATACATTTATAGAAAGATAATCCCCTGGAAATCACTGGGGAACTaGAGAGATTCTTCATCATCA +
Preference number: 5 (lower is better)
Translates to: KREDTGCQLYIYRKIIPWKSLGN*RDSSSS
Trigger: TGATGATGAAGAATCTCTCAAGTTCCCCAGTGATTT...CCAGGGGATTATCTTTCTATAAATGTATAACTGGCAACCTGTATCTTCCCTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357606.7
CDS GCA 72 bp TCGGGTCGCAGCTCCCCAGGCCCGATCACCGAGCGGTaGCTAGGAACTGGGAGCGTAACTTGGCTCGGCTCA +
Preference number: 6 (lower is better)
Translates to: SGRSSPGPITER*LGTGSVTWLGS
Trigger: TGAGCCGAGCCAAGTTACGCTCCCAGTTCCTAGGCACCGCTCGGTGATCGGGCCTGGGGAGCTGCGACCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317287.5
CDS CCA 72 bp TGCTTCCGCCTTCCGTCCCCGCGGCCGCCGGCGACCTaGGCCTACTTCCACTGCTATATAGTTGGGGGTCTC +
Preference number: 6 (lower is better)
Translates to: CFRLPSPRPPAT*AYFHCYIVGGL
Trigger: GAGACCCCCAACTATATAGCAGTGGAAGTAGGCCCAGGTCGCCGGCGGCCGCGGGGACGGAAGGCGGAAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357606.7
CDS CCA 72 bp AGGGTCCTCTGCATCTCTAGGTGGTCCTGGACCCCCTaGGGGGCCATGGCTTGGGTCCAACCAATGGGCTGG +
Preference number: 6 (lower is better)
Translates to: RVLCISRWSWTP*GAMAWVQPMGW
Trigger: CCAGCCCATTGGTTGGACCCAAGCCATGGCCCCCCAGGGGGTCCAGGACCACCTAGAGATGCAGAGGACCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS CCA 72 bp CTCCCCAGGCCCGATCACCGAGCGGTGCCTAGGAACTaGGAGCGTAACTTGGCTCGGCTCAGAACTTTGCCC +
Preference number: 6 (lower is better)
Translates to: LPRPDHRAVPRN*ERNLARLRTLP
Trigger: GGGCAAAGTTCTGAGCCGAGCCAAGTTACGCTCCCAGTTCCTAGGCACCGCTCGGTGATCGGGCCTGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317287.5
CDS CAA 90 bp GGGACCTGGGATCCCTACGTCCACCCTCCCGAGTATCCTCCTTCGTaGGAAAGCGGTGCCGCTGTCTCCGGGATGGGGGTTTCTTTCCGC +
Preference number: 6 (lower is better)
Translates to: GTWDPYVHPPEYPPS*ESGAAVSGMGVSFR
Trigger: GCGGAAAGAAACCCCCATCCCGGAGACAGCGGCACCGCTTTCCAACGAAGGAGGATACTCGGGAGGGTGGACGTAGGGATCCCAGGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS CCA 72 bp TTCGTTTCCGACCCAGCCGATGTCGACCAGGGGACCTaGGATCCCTACGTCCACCCTCCCGAGTATCCTCCT +
Preference number: 6 (lower is better)
Translates to: FVSDPADVDQGT*DPYVHPPEYPP
Trigger: AGGAGGATACTCGGGAGGGTGGACGTAGGGATCCCAGGTCCCCTGGTCGACATCGGCTGGGTCGGAAACGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS CAA 72 bp GATCCCTACGTCCACCCTCCCGAGTATCCTCCTTCGTaGGAAAGCGGTGCCGCTGTCTCCGGGATGGGGGTT +
Preference number: 6 (lower is better)
Translates to: DPYVHPPEYPPS*ESGAAVSGMGV
Trigger: AACCCCCATCCCGGAGACAGCGGCACCGCTTTCCAACGAAGGAGGATACTCGGGAGGGTGGACGTAGGGATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS TCA 72 bp GCTCCCCACAATCCCAGGCCTTTGCGCTTATCTGCCTaGCTTCGTTTCCGACCCAGCCGATGTCGACCAGGG +
Preference number: 6 (lower is better)
Translates to: APHNPRPLRLSA*LRFRPSRCRPG
Trigger: CCCTGGTCGACATCGGCTGGGTCGGAAACGAAGTCAGGCAGATAAGCGCAAAGGCCTGGGATTGTGGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS GCA 72 bp CTCGGCTCCCCACAATCCCAGGCCTTTGCGCTTATCTaGCTGACTTCGTTTCCGACCCAGCCGATGTCGACC +
Preference number: 6 (lower is better)
Translates to: LGSPQSQAFALI*LTSFPTQPMST
Trigger: GGTCGACATCGGCTGGGTCGGAAACGAAGTCAGGCAGATAAGCGCAAAGGCCTGGGATTGTGGGGAGCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS CCA 72 bp GAGGGTCCTAAAGTCCTGAGGGAGGCACCACCACTGTaGTGGGCTCCATACAACCCTCTTTCTCCGGGGTGC +
Preference number: 6 (lower is better)
Translates to: EGPKVLREAPPL*WAPYNPLSPGC
Trigger: GCACCCCGGAGAAAGAGGGTTGTATGGAGCCCACCACAGTGGTGGTGCCTCCCTCAGGACTTTAGGACCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS CCA 72 bp ATCCCTACGTCCACCCTCCCGAGTATCCTCCTTCGTTaGAAAGCGGTGCCGCTGTCTCCGGGATGGGGGTTT +
Preference number: 6 (lower is better)
Translates to: IPTSTLPSILLR*KAVPLSPGWGF
Trigger: AAACCCCCATCCCGGAGACAGCGGCACCGCTTTCCAACGAAGGAGGATACTCGGGAGGGTGGACGTAGGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS CAA 90 bp CCCAGGCCCGATCACCGAGCGGTGCCTAGGAACTGGGAGCGTAACTaGGCTCGGCTCAGAACTTTGCCCGTGAGCCAAAGAACACTGAAC +
Preference number: 6 (lower is better)
Translates to: PRPDHRAVPRNWERN*ARLRTLPVSQRTLN
Trigger: GTTCAGTGTTCTTTGGCTCACGGGCAAAGTTCTGAGCCGAGCCAAGTTACGCTCCCAGTTCCTAGGCACCGCTCGGTGATCGGGCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317287.5
CDS CAA 90 bp AAGGGCCTCCTCACTTTCTTCCGCCGCTTAGGTTTGGCTTCTCCCTaGGGTACTGTGCTGTTGGGCTTAGAGGCTGCAGCGGCTCCAGGG +
Preference number: 6 (lower is better)
Translates to: KGLLTFFRRLGLASP*GTVLLGLEAAAAPG
Trigger: CCCTGGAGCCGCTGCAGCCTCTAAGCCCAACAGCACAGTACCCAAGGGAGAAGCCAAACCTAAGCGGCGGAAGAAAGTGAGGAGGCCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS CCA 72 bp GGTCCTAAAGTCCTGAGGGAGGCACCACCACTGTGGTaGGCTCCATACAACCCTCTTTCTCCGGGGTGCTTC +
Preference number: 6 (lower is better)
Translates to: GPKVLREAPPLW*APYNPLSPGCF
Trigger: GAAGCACCCCGGAGAAAGAGGGTTGTATGGAGCCCACCACAGTGGTGGTGCCTCCCTCAGGACTTTAGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS CCA 72 bp GGGGCCATGGCTTGGGTCCAACCAATGGGCTGGGTTTaGGTGCTGTGTGTGCTTAGGACCAGAGTGCTCTGT +
Preference number: 6 (lower is better)
Translates to: GAMAWVQPMGWV*VLCVLRTRVLC
Trigger: ACAGAGCACTCTGGTCCTAAGCACACACAGCACCCAAACCCAGCCCATTGGTTGGACCCAAGCCATGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS GCA 72 bp CCATGGCTTGGGTCCAACCAATGGGCTGGGTTTGGGTaGTGTGTGTGCTTAGGACCAGAGTGCTCTGTGAGG +
Preference number: 6 (lower is better)
Translates to: PWLGSNQWAGFG*CVCLGPECSVR
Trigger: CCTCACAGAGCACTCTGGTCCTAAGCACACACAGCACCCAAACCCAGCCCATTGGTTGGACCCAAGCCATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS GCA 72 bp GACATAGTTCCTCGGCTCCCCACAATCCCAGGCCTTTaGGCTTATCTGCCTGACTTCGTTTCCGACCCAGCC +
Preference number: 6 (lower is better)
Translates to: DIVPRLPTIPGL*AYLPDFVSDPA
Trigger: GGCTGGGTCGGAAACGAAGTCAGGCAGATAAGCGCAAAGGCCTGGGATTGTGGGGAGCCGAGGAACTATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS CAA 72 bp GATCACCGAGCGGTGCCTAGGAACTGGGAGCGTAACTaGGCTCGGCTCAGAACTTTGCCCGTGAGCCAAAGA +
Preference number: 6 (lower is better)
Translates to: DHRAVPRNWERN*ARLRTLPVSQR
Trigger: TCTTTGGCTCACGGGCAAAGTTCTGAGCCGAGCCAAGTTACGCTCCCAGTTCCTAGGCACCGCTCGGTGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317287.5
CDS TCA 72 bp AAGGTATTTCAGGGTCCACGGAGGGTCCTAAAGTCCTaGGGGAGGCACCACCACTGTGGTGGGCTCCATACA +
Preference number: 6 (lower is better)
Translates to: KVFQGPRRVLKS*GRHHHCGGLHT
Trigger: TGTATGGAGCCCACCACAGTGGTGGTGCCTCCCTCAGGACTTTAGGACCCTCCGTGGACCCTGAAATACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS CCA 72 bp GGAAAGGGTTTAGCTCATCCTCAGGAACCCCAGCCATaGTCAAGAGTCGAGCCACTTCCTCTTCAGGCTGGC +
Preference number: 6 (lower is better)
Translates to: GKGLAHPQEPQP*SRVEPLPLQAG
Trigger: GCCAGCCTGAAGAGGAAGTGGCTCGACTCTTGACCATGGCTGGGGTTCCTGAGGATGAGCTAAACCCTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS CCA 72 bp TGGGCCTACTTCCACTGCTATATAGTTGGGGGTCTCTaGTCCTGGACTAGAGCAGTAGGCAACCTGGGTCCC +
Preference number: 6 (lower is better)
Translates to: WAYFHCYIVGGL*SWTRAVGNLGP
Trigger: GGGACCCAGGTTGCCTACTGCTCTAGTCCAGGACCAGAGACCCCCAACTATATAGCAGTGGAAGTAGGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357606.7
CDS CAA 72 bp CTCACTTTCTTCCGCCGCTTAGGTTTGGCTTCTCCCTaGGGTACTGTGCTGTTGGGCTTAGAGGCTGCAGCG +
Preference number: 6 (lower is better)
Translates to: LTFFRRLGLASP*GTVLLGLEAAA
Trigger: CGCTGCAGCCTCTAAGCCCAACAGCACAGTACCCAAGGGAGAAGCCAAACCTAAGCGGCGGAAGAAAGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS CAA 90 bp GCGGTGCCTAGGAACTGGGAGCGTAACTTGGCTCGGCTCAGAACTTaGCCCGTGAGCCAAAGAACACTGAACTCATCTACCTGCTGCTTG +
Preference number: 6 (lower is better)
Translates to: AVPRNWERNLARLRT*PVSQRTLNSSTCCL
Trigger: CAAGCAGCAGGTAGATGAGTTCAGTGTTCTTTGGCTCACGGGCAAAGTTCTGAGCCGAGCCAAGTTACGCTCCCAGTTCCTAGGCACCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317287.5
CDS CAA 90 bp CATCAACGTTGGAAGGGCCTCCTCACTTTCTTCCGCCGCTTAGGTTaGGCTTCTCCCTTGGGTACTGTGCTGTTGGGCTTAGAGGCTGCA +
Preference number: 6 (lower is better)
Translates to: HQRWKGLLTFFRRLG*ASPLGTVLLGLEAA
Trigger: TGCAGCCTCTAAGCCCAACAGCACAGTACCCAAGGGAGAAGCCAAACCTAAGCGGCGGAAGAAAGTGAGGAGGCCCTTCCAACGTTGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS GCA 72 bp CATGGCCTGCTATCTCTCAGCAGAGTCAAGCAACGCTaGAAGGCTGGAGAATCCAGCCAAGAGAAGAGCCAG +
Preference number: 6 (lower is better)
Translates to: HGLLSLSRVKQR*KAGESSQEKSQ
Trigger: CTGGCTCTTCTCTTGGCTGGATTCTCCAGCCTTGCAGCGTTGCTTGACTCTGCTGAGAGATAGCAGGCCATG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS GCA 72 bp CCCACTGAACTATTCTTACCAGCCGCTGCCATGGCCTaGTATCTCTCAGCAGAGTCAAGCAACGCTGCAAGG +
Preference number: 6 (lower is better)
Translates to: PTELFLPAAAMA*YLSAESSNAAR
Trigger: CCTTGCAGCGTTGCTTGACTCTGCTGAGAGATAGCAGGCCATGGCAGCGGCTGGTAAGAATAGTTCAGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS GCA 72 bp CTTTCGCTTTTCAGCATTGCTGACAATGTCCCAAGCTaGTCGCAAAACCTTGAAGGCCTCCTCAGCCCGGGG +
Preference number: 6 (lower is better)
Translates to: LSLFSIADNVPS*SQNLEGLLSPG
Trigger: CCCCGGGCTGAGGAGGCCTTCAAGGTTTTGCGAGCAGCTTGGGACATTGTCAGCAATGCTGAAAAGCGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS CAA 72 bp TGGAAGGGCCTCCTCACTTTCTTCCGCCGCTTAGGTTaGGCTTCTCCCTTGGGTACTGTGCTGTTGGGCTTA +
Preference number: 6 (lower is better)
Translates to: WKGLLTFFRRLG*ASPLGTVLLGL
Trigger: TAAGCCCAACAGCACAGTACCCAAGGGAGAAGCCAAACCTAAGCGGCGGAAGAAAGTGAGGAGGCCCTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS TCA 72 bp AGTTCAATCAGCCACCAAAAGCCTGCCTGTCCAAGTTaGCATAGTTCCTCGGCTCCCCACAATCCCAGGCCT +
Preference number: 6 (lower is better)
Translates to: SSISHQKPACPS*HSSSAPHNPRP
Trigger: AGGCCTGGGATTGTGGGGAGCCGAGGAACTATGTCAACTTGGACAGGCAGGCTTTTGGTGGCTGATTGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS CCA 72 bp TCAACATCTGATGCTGTGGCCTCAACCCCCAGTACATaGAAAGGGTTTAGCTCATCCTCAGGAACCCCAGCC +
Preference number: 6 (lower is better)
Translates to: STSDAVASTPST*KGFSSSSGTPA
Trigger: GGCTGGGGTTCCTGAGGATGAGCTAAACCCTTTCCATGTACTGGGGGTTGAGGCCACAGCATCAGATGTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS CCA 72 bp GGGACTCTGTGGGTATCTGGGGAGATACCTACACGCTaGCATCCAGCCCACTCTGTGATGTCATACACCTTT +
Preference number: 6 (lower is better)
Translates to: GTLWVSGEIPTR*HPAHSVMSYTF
Trigger: AAAGGTGTATGACATCACAGAGTGGGCTGGATGCCAGCGTGTAGGTATCTCCCCAGATACCCACAGAGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS CAA 90 bp AGGAGCTGCAAAGAAGTTCCCATTGGGCATCTGCCCTGGGGGTACTaGAAAGATCCGACTCAAGAAATCCTGAAGATCAGCAGGAGGGGC +
Preference number: 6 (lower is better)
Translates to: RSCKEVPIGHLPWGY*KDPTQEILKISRRG
Trigger: GCCCCTCCTGCTGATCTTCAGGATTTCTTGAGTCGGATCTTTCAAGTACCCCCAGGGCAGATGCCCAATGGGAACTTCTTTGCAGCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS GCA 72 bp CTCTTCAGGCTGGCAGTAGCGCCCACTAGCTACAGGTaGATTCCCCTGCCTATTAATATTCTGCTTGACCCA +
Preference number: 6 (lower is better)
Translates to: LFRLAVAPTSYR*IPLPINILLDP
Trigger: TGGGTCAAGCAGAATATTAATAGGCAGGGGAATGCACCTGTAGCTAGTGGGCGCTACTGCCAGCCTGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS CAA 72 bp AGGAACTGGGAGCGTAACTTGGCTCGGCTCAGAACTTaGCCCGTGAGCCAAAGAACACTGAACTCATCTACC +
Preference number: 6 (lower is better)
Translates to: RNWERNLARLRT*PVSQRTLNSST
Trigger: GGTAGATGAGTTCAGTGTTCTTTGGCTCACGGGCAAAGTTCTGAGCCGAGCCAAGTTACGCTCCCAGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317287.5
CDS TCA 72 bp CTGTGCTACAGCCCTTTTGACTCCCTGACATTGATTTaGGGAAAGAGAAGGGGCATCAACGTTGGAAGGGCC +
Preference number: 6 (lower is better)
Translates to: LCYSPFDSLTLI*GKRRGINVGRA
Trigger: GGCCCTTCCAACGTTGATGCCCCTTCTCTTTCCTCAAATCAATGTCAGGGAGTCAAAAGGGCTGTAGCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS GCA 72 bp CTTGACTCTGCCCAAAAGTCTCCTTCCTCAGCAGGATaGAGCCTATTACACTCAGCACAGTATCTGGCACTC +
Preference number: 6 (lower is better)
Translates to: LDSAQKSPSSAG*SLLHSAQYLAL
Trigger: GAGTGCCAGATACTGTGCTGAGTGTAATAGGCTGCATCCTGCTGAGGAAGGAGACTTTTGGGCAGAGTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS CCA 72 bp TCCAACTCATCTTCCCCCAAAGCTGGAGAGGTACAGTaGTGGCAAAAGTTGCTAGAAGAACCATTTCCTCCC +
Preference number: 6 (lower is better)
Translates to: SNSSSPKAGEVQ*WQKLLEEPFPP
Trigger: GGGAGGAAATGGTTCTTCTAGCAACTTTTGCCACCACTGTACCTCTCCAGCTTTGGGGGAAGATGAGTTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS TCA 72 bp CCAAATCACTGCTTTTCAGTTGCCTGCAGGCATAGATaGGATGGCCACAAGTTTCTACGTACTCTCCCACCA +
Preference number: 6 (lower is better)
Translates to: PNHCFSVACRHR*DGHKFLRTLPP
Trigger: TGGTGGGAGAGTACGTAGAAACTTGTGGCCATCTCATCTATGCCTGCAGGCAACTGAAAAGCAGTGATTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS CCA 72 bp GTCTATAGGCCTTCTTCAGTTCAACATCTGATGCTGTaGCCTCAACCCCCAGTACATGGAAAGGGTTTAGCT +
Preference number: 6 (lower is better)
Translates to: VYRPSSVQHLML*PQPPVHGKGLA
Trigger: AGCTAAACCCTTTCCATGTACTGGGGGTTGAGGCCACAGCATCAGATGTTGAACTGAAGAAGGCCTATAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS CAA 72 bp AAAGAAGTTCCCATTGGGCATCTGCCCTGGGGGTACTaGAAAGATCCGACTCAAGAAATCCTGAAGATCAGC +
Preference number: 6 (lower is better)
Translates to: KEVPIGHLPWGY*KDPTQEILKIS
Trigger: GCTGATCTTCAGGATTTCTTGAGTCGGATCTTTCAAGTACCCCCAGGGCAGATGCCCAATGGGAACTTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS CAA 90 bp ACTTTGCCCGTGAGCCAAAGAACACTGAACTCATCTACCTGCTGCTaGACATCTCATCTGCATACCAAGCTATTTGGTGGACGTCCACAA +
Preference number: 6 (lower is better)
Translates to: TLPVSQRTLNSSTCC*TSHLHTKLFGGRPQ
Trigger: TTGTGGACGTCCACCAAATAGCTTGGTATGCAGATGAGATGTCAAGCAGCAGGTAGATGAGTTCAGTGTTCTTTGGCTCACGGGCAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317287.5
CDS CAA 90 bp CACTCCCATCCAAACTCGAAAAAGGTCCAAATCACTGCTTTTCAGTaGCCTGCAGGCATAGATGAGATGGCCACAAGTTTCTACGTACTC +
Preference number: 6 (lower is better)
Translates to: HSHPNSKKVQITAFQ*PAGIDEMATSFYVL
Trigger: GAGTACGTAGAAACTTGTGGCCATCTCATCTATGCCTGCAGGCAACTGAAAAGCAGTGATTTGGACCTTTTTCGAGTTTGGATGGGAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS CAA 90 bp TGCTTTCCTTGGCATCGGCTACACATCATAGTATTCATTGCCTCCTaGAGGTCATCTTGCAGCTTGGACAGAAACTCATTTACTGACCGG +
Preference number: 6 (lower is better)
Translates to: CFPWHRLHIIVFIAS*RSSCSLDRNSFTDR
Trigger: CCGGTCAGTAAATGAGTTTCTGTCCAAGCTGCAAGATGACCTCAAGGAGGCAATGAATACTATGATGTGTAGCCGATGCCAAGGAAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS GCA 72 bp CCCGTGAGCCAAAGAACACTGAACTCATCTACCTGCTaGTTGACATCTCATCTGCATACCAAGCTATTTGGT +
Preference number: 6 (lower is better)
Translates to: PVSQRTLNSSTC*LTSHLHTKLFG
Trigger: ACCAAATAGCTTGGTATGCAGATGAGATGTCAAGCAGCAGGTAGATGAGTTCAGTGTTCTTTGGCTCACGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317287.5
CDS CAA 72 bp AGTTCCCATCCTTCTGGTTCCCAGTCTCGTTTTCTTTaGAGAGTTCCTGGTCCACTCCTGATTCTTCTTCTG +
Preference number: 6 (lower is better)
Translates to: SSHPSGSQSRFL*RVPGPLLILLL
Trigger: CAGAAGAAGAATCAGGAGTGGACCAGGAACTCTCAAAAGAAAACGAGACTGGGAACCAGAAGGATGGGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS GCA 72 bp CACATCATAGTATTCATTGCCTCCTTGAGGTCATCTTaGAGCTTGGACAGAAACTCATTTACTGACCGGCTC +
Preference number: 6 (lower is better)
Translates to: HIIVFIASLRSS*SLDRNSFTDRL
Trigger: GAGCCGGTCAGTAAATGAGTTTCTGTCCAAGCTGCAAGATGACCTCAAGGAGGCAATGAATACTATGATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS GCA 72 bp CTTTCCTTGGCATCGGCTACACATCATAGTATTCATTaGCTCCTTGAGGTCATCTTGCAGCTTGGACAGAAA +
Preference number: 6 (lower is better)
Translates to: LSLASATHHSIH*LLEVILQLGQK
Trigger: TTTCTGTCCAAGCTGCAAGATGACCTCAAGGAGGCAATGAATACTATGATGTGTAGCCGATGCCAAGGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS CAA 72 bp CCAAACTCGAAAAAGGTCCAAATCACTGCTTTTCAGTaGCCTGCAGGCATAGATGAGATGGCCACAAGTTTC +
Preference number: 6 (lower is better)
Translates to: PNSKKVQITAFQ*PAGIDEMATSF
Trigger: GAAACTTGTGGCCATCTCATCTATGCCTGCAGGCAACTGAAAAGCAGTGATTTGGACCTTTTTCGAGTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS CAA 90 bp AAAGAAAAGAGTTCCCATCCTTCTGGTTCCCAGTCTCGTTTTCTTTaGAGAGTTCCTGGTCCACTCCTGATTCTTCTTCTGAAGACGTCT +
Preference number: 6 (lower is better)
Translates to: KEKSSHPSGSQSRFL*RVPGPLLILLLKTS
Trigger: AGACGTCTTCAGAAGAAGAATCAGGAGTGGACCAGGAACTCTCAAAAGAAAACGAGACTGGGAACCAGAAGGATGGGAACTCTTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS CAA 72 bp TGGCATCGGCTACACATCATAGTATTCATTGCCTCCTaGAGGTCATCTTGCAGCTTGGACAGAAACTCATTT +
Preference number: 6 (lower is better)
Translates to: WHRLHIIVFIAS*RSSCSLDRNSF
Trigger: AAATGAGTTTCTGTCCAAGCTGCAAGATGACCTCAAGGAGGCAATGAATACTATGATGTGTAGCCGATGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2
CDS TCA 72 bp TTCCGCTGGACACACGTGAAAAATCACTGGGGAACTTaGGAGATTCTTCATCATCATATTCCTCTTCCAACT +
Preference number: 6 (lower is better)
Translates to: FRWTHVKNHWGT*EILHHHIPLPT
Trigger: AGTTGGAAGAGGAATATGATGATGAAGAATCTCTCAAGTTCCCCAGTGATTTTTCACGTGTGTCCAGCGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317287.5
ENST00000357606.7
ENST00000546957.2
ENST00000547445.2
ENST00000678005.2