RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DNAJC13 (Homo sapiens)

Ensembl gene IDs: ENSG00000138246

Ensembl transcript IDs: ENST00000260818.11, ENST00000464766.1, ENST00000471925.1, ENST00000486798.5, ENST00000506813.1, ENST00000509279.1, ENST00000513822.1, ENST00000650455.1

Found 642 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTCGCCTGCCTCATGGTCTACAGGAGGTGGCAGGTTAGACATGACTaGTGTAGATGTACCTGCGGTAAGGTAGCCAGCAACTCCAGGTCC +
Preference number: 1 (lower is better)
Translates to: VACLMVYRRWQVRHD*CRCTCGKVASNSRS
Trigger: GGACCTGGAGTTGCTGGCTACCTTACCGCAGGTACATCTACATCAGTCATGTCTAACCTGCCACCTCCTGTAGACCATGAGGCAGGCGAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509279.1
ENST00000650455.1
3UTR GCA 90 bp GGGAAGATGGCCCAATGGCGGGACCTGATCTGCCAGCTGAGGTTGTaGGCTGAAGAGACACACTGTTGCCATTGTCAAGGTTTCCAGAGT +
Preference number: 1 (lower is better)
Translates to: GKMAQWRDLICQLRL*AEETHCCHCQGFQS
Trigger: ACTCTGGAAACCTTGACAATGGCAACAGTGTGTCTCTTCAGCGCACAACCTCAGCTGGCAGATCAGGTCCCGCCATTGGGCCATCTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR TCA 90 bp GATGGCCCAATGGCGGGACCTGATCTGCCAGCTGAGGTTGTGCGCTaGAGAGACACACTGTTGCCATTGTCAAGGTTTCCAGAGTTTCTC +
Preference number: 1 (lower is better)
Translates to: DGPMAGPDLPAEVVR*RDTLLPLSRFPEFL
Trigger: GAGAAACTCTGGAAACCTTGACAATGGCAACAGTGTGTCTCTTCAGCGCACAACCTCAGCTGGCAGATCAGGTCCCGCCATTGGGCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR CCA 90 bp ATGCCAGTGAAGGGTGCAGGGACAAAACCTAATAGTCTTGGATGGTaGGGGGAGGATGGCCACGCAGACTTGATGCAGGAGAGGGAAATA +
Preference number: 1 (lower is better)
Translates to: MPVKGAGTKPNSLGW*GEDGHADLMQEREI
Trigger: TATTTCCCTCTCCTGCATCAAGTCTGCGTGGCCATCCTCCCCCCACCATCCAAGACTATTAGGTTTTGTCCCTGCACCCTTCACTGGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
3UTR GCA 90 bp AGAGCCTCCAAAGCCATTTCTACTCTCGGTAAGCGATCTCCATGTTaGTCTGACTCCACTTTTGCCGCGTGTGTGATGGCCATGAATGTG +
Preference number: 1 (lower is better)
Translates to: RASKAISTLGKRSPC*SDSTFAACVMAMNV
Trigger: CACATTCATGGCCATCACACACGCGGCAAAAGTGGAGTCAGAGCAACATGGAGATCGCTTACCGAGAGTAGAAATGGCTTTGGAGGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR CCA 90 bp GTTGCTTGTTCTTCAGCCAAATACCCTCCAAGGCGACTCAGAGCATaGACACTCAGTTTGGCAAGGCTGTTTGCTACCTCCTGCTGGTTT +
Preference number: 1 (lower is better)
Translates to: VACSSAKYPPRRLRA*TLSLARLFATSCWF
Trigger: AAACCAGCAGGAGGTAGCAAACAGCCTTGCCAAACTGAGTGTCCATGCTCTGAGTCGCCTTGGAGGGTATTTGGCTGAAGAACAAGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR TCA 90 bp GTCTCTAACATGCATCCGATCAGCATCCTTCTCAGGTACGAGATCTaGGCTTTCCAAGTATGCCAGCAAGCCTGGCGGCAAAATGCGTTT +
Preference number: 1 (lower is better)
Translates to: VSNMHPISILLRYEI*AFQVCQQAWRQNAF
Trigger: AAACGCATTTTGCCGCCAGGCTTGCTGGCATACTTGGAAAGCTCAGATCTCGTACCTGAGAAGGATGCTGATCGGATGCATGTTAGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR CCA 90 bp CAGCCAAATACCCTCCAAGGCGACTCAGAGCATGGACACTCAGTTTaGCAAGGCTGTTTGCTACCTCCTGCTGGTTTGTTTCTTCACTTT +
Preference number: 1 (lower is better)
Translates to: QPNTLQGDSEHGHSV*QGCLLPPAGLFLHF
Trigger: AAAGTGAAGAAACAAACCAGCAGGAGGTAGCAAACAGCCTTGCCAAACTGAGTGTCCATGCTCTGAGTCGCCTTGGAGGGTATTTGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR TCA 90 bp GGCAATACTGATAAAGTGCTCTTGTGTTACTCTGAAGACGAGGTGTaGAATCCGCGAGATGGGCAGCAATCTTCTCTATCATCAGGCGCC +
Preference number: 1 (lower is better)
Translates to: GNTDKVLLCYSEDEV*NPRDGQQSSLSSGA
Trigger: GGCGCCTGATGATAGAGAAGATTGCTGCCCATCTCGCGGATTTCACACCTCGTCTTCAGAGTAACACAAGAGCACTTTATCAGTATTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR TCA 90 bp GCATGGATAACCCGAATGGCACTCTTAGGAATGGCATTGTTCCTATaGTTCATTGCCTGGATAACTTTGGGAAGATGGCCCAATGGCGGG +
Preference number: 1 (lower is better)
Translates to: AWITRMALLGMALFL*FIAWITLGRWPNGG
Trigger: CCCGCCATTGGGCCATCTTCCCAAAGTTATCCAGGCAATGAATCATAGGAACAATGCCATTCCTAAGAGTGCCATTCGGGTTATCCATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR TCA 90 bp CCATACTGCAAACTTCGAGTCATTGCCTTGAGAGCTTTAACAATCTaGGCCTTAGTGGCTGCTGGGCTGTCCAGGTTTTCAAGGCCAATG +
Preference number: 1 (lower is better)
Translates to: PYCKLRVIALRALTI*ALVAAGLSRFSRPM
Trigger: CATTGGCCTTGAAAACCTGGACAGCCCAGCAGCCACTAAGGCTCAGATTGTTAAAGCTCTCAAGGCAATGACTCGAAGTTTGCAGTATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR GCA 90 bp AACCCGAATGGCACTCTTAGGAATGGCATTGTTCCTATGATTCATTaGCTGGATAACTTTGGGAAGATGGCCCAATGGCGGGACCTGATC +
Preference number: 1 (lower is better)
Translates to: NPNGTLRNGIVPMIH*LDNFGKMAQWRDLI
Trigger: GATCAGGTCCCGCCATTGGGCCATCTTCCCAAAGTTATCCAGGCAATGAATCATAGGAACAATGCCATTCCTAAGAGTGCCATTCGGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR GCA 90 bp CAGGATTTCATTCACCTGTTCTCCATACTGCAAACTTCGAGTCATTaGCTTGAGAGCTTTAACAATCTGAGCCTTAGTGGCTGCTGGGCT +
Preference number: 1 (lower is better)
Translates to: QDFIHLFSILQTSSH*LESFNNLSLSGCWA
Trigger: AGCCCAGCAGCCACTAAGGCTCAGATTGTTAAAGCTCTCAAGGCAATGACTCGAAGTTTGCAGTATGGAGAACAGGTGAATGAAATCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR CCA 90 bp CAACAGTATCTGCTCGCTTTTTCATTCCATTCATCAGTGGGCCAATaGTCTCTAAAGATGCCATGGCTCGAACACACAGCTCATTTTCAG +
Preference number: 1 (lower is better)
Translates to: QQYLLAFSFHSSVGQ*SLKMPWLEHTAHFQ
Trigger: CTGAAAATGAGCTGTGTGTTCGAGCCATGGCATCTTTAGAGACCATTGGCCCACTGATGAATGGAATGAAAAAGCGAGCAGATACTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR GCA 90 bp AATAAAGATCCTCAAGAAGACTCCTCCAACAGCAAGTTCACCCTCTaGTTCTCCAAACACCACAGCAAAATCTTCAGGCAACTTCCAGTT +
Preference number: 1 (lower is better)
Translates to: NKDPQEDSSNSKFTL*FSKHHSKIFRQLPV
Trigger: AACTGGAAGTTGCCTGAAGATTTTGCTGTGGTGTTTGGAGAAGCAGAGGGTGAACTTGCTGTTGGAGGAGTCTTCTTGAGGATCTTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR CCA 90 bp GCTTCAATTACATTGCTTTGCAGTGGTACTGTAGCTCGGCTTACATaGAGATGTGCAAGGGTAAGCAAGTCCACAAGGATTCTTATTCCA +
Preference number: 1 (lower is better)
Translates to: ASITLLCSGTVARLT*RCARVSKSTRILIP
Trigger: TGGAATAAGAATCCTTGTGGACTTGCTTACCCTTGCACATCTCCATGTAAGCCGAGCTACAGTACCACTGCAAAGCAATGTAATTGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR GCA 90 bp GAGTTGTGGATAGTTGATTATAGGAATGGGGCAATACTGATAAAGTaGTCTTGTGTTACTCTGAAGACGAGGTGTGAAATCCGCGAGATG +
Preference number: 1 (lower is better)
Translates to: ELWIVDYRNGAILIK*SCVTLKTRCEIREM
Trigger: CATCTCGCGGATTTCACACCTCGTCTTCAGAGTAACACAAGAGCACTTTATCAGTATTGCCCCATTCCTATAATCAACTATCCACAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR TCA 90 bp TCCCTGTCCTTGAGGCAGATTAAGCACTTCATAAGCATCATCTATTaGCATCATAGGTGGCTTCTTTTCTACTTCTTTCTTCCAGGCATC +
Preference number: 1 (lower is better)
Translates to: SLSLRQIKHFISIIY*HHRWLLFYFFLPGI
Trigger: GATGCCTGGAAGAAAGAAGTAGAAAAGAAGCCACCTATGATGTCAATAGATGATGCTTATGAAGTGCTTAATCTGCCTCAAGGACAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR TCA 90 bp AAATCTGCTTTCAGGGCTTGTGCTACTAATTCACTCTGCTCCTTCTaGAACATTCGATTAATTGCTTCACAGGCTAGACCAACAGTATCT +
Preference number: 1 (lower is better)
Translates to: KSAFRACATNSLCSF*NIRLIASQARPTVS
Trigger: AGATACTGTTGGTCTAGCCTGTGAAGCAATTAATCGAATGTTTCAGAAGGAGCAGAGTGAATTAGTAGCACAAGCCCTGAAAGCAGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR TCA 90 bp AGAAATGAACAAATCATGTTTCTGATCTTTGAAGGCACTCCAGACTaGAGAACGGCACAGGATTTCATTCACCTGTTCTCCATACTGCAA +
Preference number: 1 (lower is better)
Translates to: RNEQIMFLIFEGTPD*RTAQDFIHLFSILQ
Trigger: TTGCAGTATGGAGAACAGGTGAATGAAATCCTGTGCCGTTCTTCAGTCTGGAGTGCCTTCAAAGATCAGAAACATGATTTGTTCATTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR TCA 90 bp AGTATCTTTCAGTTCTTCTCGTGTTTTGAAATTCCAAATAAGGTTTaGCCTGGCATGGTCTTGACCAAACCTATAATAGAAGAGATCCCA +
Preference number: 1 (lower is better)
Translates to: SIFQFFSCFEIPNKV*PGMVLTKPIIEEIP
Trigger: TGGGATCTCTTCTATTATAGGTTTGGTCAAGACCATGCCAGGTCAAACCTTATTTGGAATTTCAAAACACGAGAAGAACTGAAAGATACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR-3UTR CCA 90 bp ATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCAGGTCGCCTGCCTCATaGTCTACAGGAGGTGGCAGG +
Preference number: 2 (lower is better)
Translates to: ISWRNVDLALAFQRLLSLRSPAS*STGGGR
Trigger: CCTGCCACCTCCTGTAGACCATGAGGCAGGCGACCT...GAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509279.1
ENST00000650455.1
3UTR-3UTR GCA 90 bp GGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGATAGCCAAGGTCGCCTaGCTCATGGTCTACAGGAGG +
Preference number: 2 (lower is better)
Translates to: GSKSLLQRISWRNVDLALIAKVA*LMVYRR
Trigger: CCTCCTGTAGACCATGAGGCAGGCGACCTTGGCTAT...CAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509279.1
ENST00000650455.1
3UTR-3UTR CCA 90 bp CTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAAGGAGGAATGTGGACTTaGCACTGGCCTTTCAGCGTT +
Preference number: 2 (lower is better)
Translates to: LEECGLGTGLSAFIVSREGGMWT*HWPFSV
Trigger: AACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCC...TTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
3UTR-3UTR CCA 90 bp CGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTGGAGGAATGTGGACTTaGCACTGGCCTTTCAGCGTT +
Preference number: 2 (lower is better)
Translates to: RISWRNVDLALAFQRLLSGGMWT*HWPFSV
Trigger: AACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCC...AGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
3UTR-3UTR CCA 90 bp GGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATATTTCAAGTCTAGGTCGCCTGCCTCATaGTCTACAGGAGGTGGCAGG +
Preference number: 2 (lower is better)
Translates to: GLGTGLSAFIVSREYFKSRSPAS*STGGGR
Trigger: CCTGCCACCTCCTGTAGACCATGAGGCAGGCGACCT...AGACTTGAAATATTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509279.1
ENST00000650455.1
3UTR CAA 90 bp TCAGCCAAATACCCTCCAAGGCGACTCAGAGCATGGACACTCAGTTaGGCAAGGCTGTTTGCTACCTCCTGCTGGTTTGTTTCTTCACTT +
Preference number: 2 (lower is better)
Translates to: SAKYPPRRLRAWTLS*ARLFATSCWFVSSL
Trigger: AAGTGAAGAAACAAACCAGCAGGAGGTAGCAAACAGCCTTGCCAAACTGAGTGTCCATGCTCTGAGTCGCCTTGGAGGGTATTTGGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR CAA 90 bp CTCCACTTTTGCCGCGTGTGTGATGGCCATGAATGTGTGCAAGTATaGGGCCTGCGAGCCTATATAATCCAAGAGACTTGCAGCAAATGC +
Preference number: 2 (lower is better)
Translates to: LHFCRVCDGHECVQV*GLRAYIIQETCSKC
Trigger: GCATTTGCTGCAAGTCTCTTGGATTATATAGGCTCGCAGGCCCAATACTTGCACACATTCATGGCCATCACACACGCGGCAAAAGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR-3UTR CCA 90 bp TTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTCAGCTGGAGGAATGTaGACTTGGCACTGGCCTTTC +
Preference number: 2 (lower is better)
Translates to: FNVSAGGMWTWHWPFSVYSAGGM*TWHWPF
Trigger: GAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGA...ATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
3UTR-3UTR CCA 90 bp GAGACACCACTTAAGCTGGGGTATGGACTGAAGTGGTCGCCATCCATCCATGCCCTTCATGTTTACTTTTaGGGTGAGCAAGAAGCGATG +
Preference number: 2 (lower is better)
Translates to: ETPLKLGYGLKWSPSIHALHVYF*GEQEAM
Trigger: CATCGCTTCTTGCTCACCCCAAAAGTAAACATGAAG...GGCATGGATGGATGGCGACCACTTCAGTCCATACCCCAGCTTAAGTGGTGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR-3UTR CCA 90 bp TTCAGCCAAATACCCTCCAAGGCGACTCAGAGCATGGACACTCAGTTTGGCAAGAACCGGGTCTTTAATTaGCCAATCTGGAAACCGGAG +
Preference number: 2 (lower is better)
Translates to: FSQIPSKATQSMDTQFGKNRVFN*PIWKPE
Trigger: CTCCGGTTTCCAGATTGGCCAATTAAAGACCCGGTT...CTTGCCAAACTGAGTGTCCATGCTCTGAGTCGCCTTGGAGGGTATTTGGCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR CAA 90 bp ATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATaGTCTCTCGTGAATATTTCAAGTCTGATAGCCAAGGTCGCCTGC +
Preference number: 2 (lower is better)
Translates to: ISWRNVDLALAFQRL*SLVNISSLIAKVAC
Trigger: GCAGGCGACCTTGGCTATCAGACTTGAAATATTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509279.1
ENST00000650455.1
3UTR CAA 90 bp AGTCCATTCTCTCTTCTGAGCTCTTCAGCATTGAGGGCTGAACAGTaGACAGTATGGAAAGCTAGCTCTGTAGCCGCAGGCAACAATGGT +
Preference number: 2 (lower is better)
Translates to: SPFSLLSSSALRAEQ*TVWKASSVAAGNNG
Trigger: ACCATTGTTGCCTGCGGCTACAGAGCTAGCTTTCCATACTGTCAACTGTTCAGCCCTCAATGCTGAAGAGCTCAGAAGAGAGAATGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR-3UTR CCA 90 bp CTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAACTTCAACGTATCAGCTaGAGGAATGTGGACTTGGCA +
Preference number: 2 (lower is better)
Translates to: LEECGLGTGLSAFIVSRELQRIS*RNVDLA
Trigger: TGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAG...TTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
3UTR-3UTR CCA 90 bp GGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGCTTCAACGTATCAGCTaGAGGAATGTGGACTTGGCA +
Preference number: 2 (lower is better)
Translates to: GSKSLLQRISWRNVDLALLQRIS*RNVDLA
Trigger: TGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAG...CAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
3UTR CAA 90 bp ACGCGGGGAATACTCTTGCCAAAATATAGTACCCGACAGAGATCCTaGATGATGCTAGGCATTTCCGTGATCTTCTCTCGGCATTCCTCA +
Preference number: 2 (lower is better)
Translates to: TRGILLPKYSTRQRS*MMLGISVIFSRHSS
Trigger: TGAGGAATGCCGAGAGAAGATCACGGAAATGCCTAGCATCATCAAGGATCTCTGTCGGGTACTATATTTTGGCAAGAGTATTCCCCGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR-3UTR TCA 90 bp AGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCGGAATAACACTGTCATaGAACCAGGAGAAAGGCAGT +
Preference number: 2 (lower is better)
Translates to: SKSLLQRISWRNVDLALAGITLS*NQEKGS
Trigger: ACTGCCTTTCTCCTGGTTTCATGACAGTGTTATTCC...GGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
3UTR-3UTR TCA 90 bp GGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGGAATAACACTGTCATaGAACCAGGAGAAAGGCAGT +
Preference number: 2 (lower is better)
Translates to: GSKSLLQRISWRNVDLALGITLS*NQEKGS
Trigger: ACTGCCTTTCTCCTGGTTTCATGACAGTGTTATTCC...CAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
3UTR-3UTR TCA 90 bp TTCAGCCAAATACCCTCCAAGGCGACTCAGAGCATGGACACTCAGTTTGGCAAGTGTACCCACTTATGTTaGTCCACAGAGTGCTTTCTT +
Preference number: 2 (lower is better)
Translates to: FSQIPSKATQSMDTQFGKCTHLC*STECFL
Trigger: AAGAAAGCACTCTGTGGATCAACATAAGTGGGTACA...CTTGCCAAACTGAGTGTCCATGCTCTGAGTCGCCTTGGAGGGTATTTGGCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR-3UTR TCA 90 bp GCTTTCAGAAGGTTAATGATTGAGGATGCCAGTGAAGGGTGCAGGGACAAAACCCAGGTTAGACATGACTaGTGTAGATGTACCTGCGGT +
Preference number: 2 (lower is better)
Translates to: AFRRLMIEDASEGCRDKTQVRHD*CRCTCG
Trigger: ACCGCAGGTACATCTACATCAGTCATGTCTAACCTG...GGTTTTGTCCCTGCACCCTTCACTGGCATCCTCAATCATTAACCTTCTGAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR-3UTR CCA 90 bp CTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAAATGTGGACTTGGCACTaGCCTTTCAGCGTTTATTGT +
Preference number: 2 (lower is better)
Translates to: LEECGLGTGLSAFIVSREMWTWH*PFSVYC
Trigger: ACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACAT...TTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
3UTR CAA 90 bp CCAGCAAGCCTGGCGGCAAAATGCGTTTCAACAAGTTTGTTGCAGTaGCATTATCAGCTGTCCAGAGTCCCACTAAATGTCTACTTAGCT +
Preference number: 2 (lower is better)
Translates to: PASLAAKCVSTSLLQ*HYQLSRVPLNVYLA
Trigger: AGCTAAGTAGACATTTAGTGGGACTCTGGACAGCTGATAATGCAACTGCAACAAACTTGTTGAAACGCATTTTGCCGCCAGGCTTGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR CAA 90 bp TCTTGTAACACCTCTAGTCCATTCTCTCTTCTGAGCTCTTCAGCATaGAGGGCTGAACAGTTGACAGTATGGAAAGCTAGCTCTGTAGCC +
Preference number: 2 (lower is better)
Translates to: SCNTSSPFSLLSSSA*RAEQLTVWKASSVA
Trigger: GGCTACAGAGCTAGCTTTCCATACTGTCAACTGTTCAGCCCTCAATGCTGAAGAGCTCAGAAGAGAGAATGGACTAGAGGTGTTACAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR-3UTR GCA 90 bp TTCTTGCATCTCATGAAATCCATACGGGCCACTCCTTTCTTTGTCTGCGTTGCCTCTCTTTTTGAGCAATaGCCATCCTATCCCTCCAGT +
Preference number: 2 (lower is better)
Translates to: FLHLMKSIRATPFFVCVASLFEQ*PSYPSS
Trigger: ACTGGAGGGATAGGATGGGCATTGCTCAAAAAGAGA...GGCAACGCAGACAAAGAAAGGAGTGGCCCGTATGGATTTCATGAGATGCAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR-3UTR CCA 90 bp TTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATATGTGGACTTGGCACTaGCCTTTCAGCGTTTATTGT +
Preference number: 2 (lower is better)
Translates to: FNVSAGGMWTWHWPFSVYMWTWH*PFSVYC
Trigger: ACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACAT...ATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
3UTR-3UTR CCA 90 bp CTATCTGACAGCAGTCTTTTCACTTTGGGTAGAGGCCGAATGATGGCATTGTCTCTTCAACGTATCAGCTaGAGGAATGTGGACTTGGCA +
Preference number: 2 (lower is better)
Translates to: LSDSSLFTLGRGRMMALSLQRIS*RNVDLA
Trigger: TGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAG...AGACAATGCCATCATTCGGCCTCTACCCAAAGTGAAAAGACTGCTGTCAGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR-3UTR CCA 90 bp GCTTCACAGGCTAGACCAACAGTATCTGCTCGCTTTTTCATTCCATTCATCAGTGTAGCTCGGCTTACATaGAGATGTGCAAGGGTAAGC +
Preference number: 2 (lower is better)
Translates to: ASQARPTVSARFFIPFISVARLT*RCARVS
Trigger: GCTTACCCTTGCACATCTCCATGTAAGCCGAGCTAC...ACTGATGAATGGAATGAAAAAGCGAGCAGATACTGTTGGTCTAGCCTGTGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR CAA 90 bp GAAGTGGTCGCCATCCATCCATGCCTTGAGCCCAGCATCTGGTTTTaGCATTTAACATTCCTTTGGTCCACAATTCTTGCATCTCATGAA +
Preference number: 2 (lower is better)
Translates to: EVVAIHPCLEPSIWF*HLTFLWSTILASHE
Trigger: TTCATGAGATGCAAGAATTGTGGACCAAAGGAATGTTAAATGCAAAAACCAGATGCTGGGCTCAAGGCATGGATGGATGGCGACCACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR-3UTR GCA 90 bp TGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATAAGGCAGTAAGAGTTTaGTTCAACGTATCAGCTGGA +
Preference number: 2 (lower is better)
Translates to: WRNVDLALAFQRLLSLVNKAVRV*FNVSAG
Trigger: TCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTT...ATTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
3UTR-3UTR GCA 90 bp AGTGACTTAGCCCAATTTTTGTTGACTGTAGCTCAACCCTACAGTCATGCTAGTATGGCCATGAATGTGTaGAAGTATTGGGCCTGCGAG +
Preference number: 2 (lower is better)
Translates to: SDLAQFLLTVAQPYSHASMAMNV*KYWACE
Trigger: CTCGCAGGCCCAATACTTGCACACATTCATGGCCAT...ACTAGCATGACTGTAGGGTTGAGCTACAGTCAACAAAAATTGGGCTAAGTCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR-3UTR TCA 90 bp AACCAGGAGAAAGGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGTGTACCCACTTATGTTaGTCCACAGAGTGCTTTCTT +
Preference number: 2 (lower is better)
Translates to: NQEKGSKSLLQRISWRNVCTHLC*STECFL
Trigger: AAGAAAGCACTCTGTGGATCAACATAAGTGGGTACA...CACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTTCTCCTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
3UTR-3UTR TCA 90 bp CATCTCATGAAATCCATACGGGCCACTCCTTTCTTTGTCTGCGTTGCCAAAATAATTCCAAATAAGGTTTaGCCTGGCATGGTCTTGACC +
Preference number: 2 (lower is better)
Translates to: HLMKSIRATPFFVCVAKIIPNKV*PGMVLT
Trigger: GGTCAAGACCATGCCAGGTCAAACCTTATTTGGAAT...TATTTTGGCAACGCAGACAAAGAAAGGAGTGGCCCGTATGGATTTCATGAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR-3UTR GCA 90 bp GGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATATTTCAAGTCTAGCCTGGCGGCAAAATaGGTTTCAACAAGTTTGTTG +
Preference number: 2 (lower is better)
Translates to: GLGTGLSAFIVSREYFKSSLAAK*VSTSLL
Trigger: CAACAAACTTGTTGAAACGCATTTTGCCGCCAGGCT...AGACTTGAAATATTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR-3UTR CCA 90 bp TATAACAAAATAGCAACCTTCTCAACAAGGATAGGGTCAAAGGTCAGCAGTAGCGTATGCCAGCAAGCCTaGCGGCAAAATGCGTTTCAA +
Preference number: 2 (lower is better)
Translates to: YNKIATFSTRIGSKVSSSVCQQA*RQNAFQ
Trigger: TTGAAACGCATTTTGCCGCCAGGCTTGCTGGCATAC...GCTACTGCTGACCTTTGACCCTATCCTTGTTGAGAAGGTTGCTATTTTGTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR-3UTR CCA 90 bp GCTTCACAGGCTAGACCAACAGTATCTGCTCGCTTTTTCATTCCATTCATCAGTTTTTCAGACAAGGCATaGATAACCCGAATGGCACTC +
Preference number: 2 (lower is better)
Translates to: ASQARPTVSARFFIPFISFSDKA*ITRMAL
Trigger: GAGTGCCATTCGGGTTATCCATGCCTTGTCTGAAAA...ACTGATGAATGGAATGAAAAAGCGAGCAGATACTGTTGGTCTAGCCTGTGAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR-3UTR TCA 90 bp TTCTTGCATCTCATGAAATCCATACGGGCCACTCCTTTCTTTGTCTGCGTTGCCTTTATATTCTCTTTTTaGGCAATGCCCATCCTATCC +
Preference number: 2 (lower is better)
Translates to: FLHLMKSIRATPFFVCVAFIFSF*AMPILS
Trigger: GGATAGGATGGGCATTGCTCAAAAAGAGAATATAAA...GGCAACGCAGACAAAGAAAGGAGTGGCCCGTATGGATTTCATGAGATGCAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR CAA 90 bp AACGTAATTCGAACCTTTGGACCTATCAGTTTATCTGCTGTCATTTaGGCAAAAAGTTCTGCTGTTTGGGCTCGAACCTGTGGATGTGTT +
Preference number: 2 (lower is better)
Translates to: NVIRTFGPISLSAVI*AKSSAVWARTCGCV
Trigger: AACACATCCACAGGTTCGAGCCCAAACAGCAGAACTTTTTGCCAAAATGACAGCAGATAAACTGATAGGTCCAAAGGTTCGAATTACGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR-3UTR TCA 90 bp GGGTTATCTTGCATGATATGGTATAACAAAATAGCAACCTTCTCAACAAGGATATGGGTAGAGGCCGAATaGTGGCATTGTCTTGATCCC +
Preference number: 2 (lower is better)
Translates to: GLSCMIWYNKIATFSTRIWVEAE*WHCLDP
Trigger: GGGATCAAGACAATGCCATCATTCGGCCTCTACCCA...TATCCTTGTTGAGAAGGTTGCTATTTTGTTATACCATATCATGCAAGATAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506813.1
3UTR-3UTR TCA 90 bp AGTGACTTAGCCCAATTTTTGTTGACTGTAGCTCAACCCTACAGTCATGCTAGTCTTCTTTATGACGGTTaGAGAGGATGCTCTGTGTTT +
Preference number: 2 (lower is better)
Translates to: SDLAQFLLTVAQPYSHASLLYDG*RGCSVF
Trigger: AAACACAGAGCATCCTCTTCAACCGTCATAAAGAAG...ACTAGCATGACTGTAGGGTTGAGCTACAGTCAACAAAAATTGGGCTAAGTCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR-3UTR GCA 90 bp TTGTCTCTCGTGAATATTTCAAGTCTGATAGCCAAGGTCGCCTGCCTCATGGTCTTTCAACAAGTTTGTTaGAGTTGCATTATCAGCTGT +
Preference number: 2 (lower is better)
Translates to: LSLVNISSLIAKVACLMVFQQVC*SCIISC
Trigger: ACAGCTGATAATGCAACTGCAACAAACTTGTTGAAA...GACCATGAGGCAGGCGACCTTGGCTATCAGACTTGAAATATTCACGAGAGACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR-3UTR CCA 90 bp CACAGGCTAGACCAACAGTATCTGCTCGCTTTTTCATTCCATTCATCAGTGGGCCATTTAACATTCCTTTaGTCCACAATTCTTGCATCT +
Preference number: 2 (lower is better)
Translates to: HRLDQQYLLAFSFHSSVGHLTFL*STILAS
Trigger: AGATGCAAGAATTGTGGACCAAAGGAATGTTAAATG...GCCCACTGATGAATGGAATGAAAAAGCGAGCAGATACTGTTGGTCTAGCCTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR-3UTR TCA 90 bp TTCCATTGTTATAGTCCGAATAAGCATGGGGTATCCTGCATATTTATAAGGCTGAAGGTCAGCAGTAGCTaGATAATATGGGGAAGGCAA +
Preference number: 2 (lower is better)
Translates to: FHCYSPNKHGVSCIFIRLKVSSS*IIWGRQ
Trigger: TTGCCTTCCCCATATTATTCAGCTACTGCTGACCTT...CAGCCTTATAAATATGCAGGATACCCCATGCTTATTCGGACTATAACAATGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR-3UTR TCA 90 bp TCTTTTAGAAGCTTAACCGGGTCTTTAATTGGCCAATCTGGAAACCGGAGTGTATCCATAAGATTTCCTTaGAAAACAGTACCCTGCTTG +
Preference number: 2 (lower is better)
Translates to: SFRSLTGSLIGQSGNRSVSIRFP*KTVPCL
Trigger: CAAGCAGGGTACTGTTTTTCAAGGAAATCTTATGGA...TACACTCCGGTTTCCAGATTGGCCAATTAAAGACCCGGTTAAGCTTCTAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR-3UTR TCA 90 bp TGTGGGTTATCTTGCATGATATGGTATAACAAAATAGCAACCTTCTCAACAAGGAAGGTCAGCAGTAGCTaGATAATATGGGGAAGGCAA +
Preference number: 2 (lower is better)
Translates to: CGLSCMIWYNKIATFSTRKVSSS*IIWGRQ
Trigger: TTGCCTTCCCCATATTATTCAGCTACTGCTGACCTT...CCTTGTTGAGAAGGTTGCTATTTTGTTATACCATATCATGCAAGATAACCCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506813.1
ENST00000650455.1
3UTR-3UTR TCA 90 bp TGGATAGTTGATTATAGGAATGGGGCAATACTGATAAAGTGCTCTTGTGTTACTAATTCTTGCATCTCATaGAATCCATACGGGCCACTC +
Preference number: 2 (lower is better)
Translates to: WIVDYRNGAILIKCSCVTNSCIS*NPYGPL
Trigger: GAGTGGCCCGTATGGATTTCATGAGATGCAAGAATT...AGTAACACAAGAGCACTTTATCAGTATTGCCCCATTCCTATAATCAACTATCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR-3UTR GCA 90 bp TGGATAGTTGATTATAGGAATGGGGCAATACTGATAAAGTGCTCTTGTGTTACTTATGGGGAAGGCAAGTaGTATCTGACAGCAGTCTTT +
Preference number: 2 (lower is better)
Translates to: WIVDYRNGAILIKCSCVTYGEGK*YLTAVF
Trigger: AAAGACTGCTGTCAGATAGCACTTGCCTTCCCCATA...AGTAACACAAGAGCACTTTATCAGTATTGCCCCATTCCTATAATCAACTATCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR-3UTR GCA 90 bp AGTGACTTAGCCCAATTTTTGTTGACTGTAGCTCAACCCTACAGTCATGCTAGTGCAATACTGATAAAGTaGTCTTGTGTTACTCTGAAG +
Preference number: 2 (lower is better)
Translates to: SDLAQFLLTVAQPYSHASAILIK*SCVTLK
Trigger: CTTCAGAGTAACACAAGAGCACTTTATCAGTATTGC...ACTAGCATGACTGTAGGGTTGAGCTACAGTCAACAAAAATTGGGCTAAGTCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR GCA 72 bp GCCCAATGGCGGGACCTGATCTGCCAGCTGAGGTTGTaGGCTGAAGAGACACACTGTTGCCATTGTCAAGGT +
Preference number: 3 (lower is better)
Translates to: AQWRDLICQLRL*AEETHCCHCQG
Trigger: ACCTTGACAATGGCAACAGTGTGTCTCTTCAGCGCACAACCTCAGCTGGCAGATCAGGTCCCGCCATTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR CCA 72 bp AAGGGTGCAGGGACAAAACCTAATAGTCTTGGATGGTaGGGGGAGGATGGCCACGCAGACTTGATGCAGGAG +
Preference number: 3 (lower is better)
Translates to: KGAGTKPNSLGW*GEDGHADLMQE
Trigger: CTCCTGCATCAAGTCTGCGTGGCCATCCTCCCCCCACCATCCAAGACTATTAGGTTTTGTCCCTGCACCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
3UTR TCA 72 bp ATGGCGGGACCTGATCTGCCAGCTGAGGTTGTGCGCTaGAGAGACACACTGTTGCCATTGTCAAGGTTTCCA +
Preference number: 3 (lower is better)
Translates to: MAGPDLPAEVVR*RDTLLPLSRFP
Trigger: TGGAAACCTTGACAATGGCAACAGTGTGTCTCTTCAGCGCACAACCTCAGCTGGCAGATCAGGTCCCGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR TCA 72 bp ATGCATCCGATCAGCATCCTTCTCAGGTACGAGATCTaGGCTTTCCAAGTATGCCAGCAAGCCTGGCGGCAA +
Preference number: 3 (lower is better)
Translates to: MHPISILLRYEI*AFQVCQQAWRQ
Trigger: TTGCCGCCAGGCTTGCTGGCATACTTGGAAAGCTCAGATCTCGTACCTGAGAAGGATGCTGATCGGATGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR CCA 72 bp ACCCTCCAAGGCGACTCAGAGCATGGACACTCAGTTTaGCAAGGCTGTTTGCTACCTCCTGCTGGTTTGTTT +
Preference number: 3 (lower is better)
Translates to: TLQGDSEHGHSV*QGCLLPPAGLF
Trigger: AAACAAACCAGCAGGAGGTAGCAAACAGCCTTGCCAAACTGAGTGTCCATGCTCTGAGTCGCCTTGGAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR CCA 72 bp TCTTCAGCCAAATACCCTCCAAGGCGACTCAGAGCATaGACACTCAGTTTGGCAAGGCTGTTTGCTACCTCC +
Preference number: 3 (lower is better)
Translates to: SSAKYPPRRLRA*TLSLARLFATS
Trigger: GGAGGTAGCAAACAGCCTTGCCAAACTGAGTGTCCATGCTCTGAGTCGCCTTGGAGGGTATTTGGCTGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR TCA 72 bp CTCATGGTCTACAGGAGGTGGCAGGTTAGACATGACTaGTGTAGATGTACCTGCGGTAAGGTAGCCAGCAAC +
Preference number: 3 (lower is better)
Translates to: LMVYRRWQVRHD*CRCTCGKVASN
Trigger: GTTGCTGGCTACCTTACCGCAGGTACATCTACATCAGTCATGTCTAACCTGCCACCTCCTGTAGACCATGAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509279.1
ENST00000650455.1
3UTR CCA 72 bp CTTGAGAGCTTTAACAATCTGAGCCTTAGTGGCTGCTaGGCTGTCCAGGTTTTCAAGGCCAATGCCTTCGAG +
Preference number: 3 (lower is better)
Translates to: LESFNNLSLSGC*AVQVFKANAFE
Trigger: CTCGAAGGCATTGGCCTTGAAAACCTGGACAGCCCAGCAGCCACTAAGGCTCAGATTGTTAAAGCTCTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR-3UTR CAA 90 bp TTCAGCCAAATACCCTCCAAGGCGACTCAGAGCATGGACACTCAGTTTGGCAAGACGCGGGGAATACTCTaGCCAAAATATAGTACCCGA +
Preference number: 3 (lower is better)
Translates to: FSQIPSKATQSMDTQFGKTRGIL*PKYSTR
Trigger: TCGGGTACTATATTTTGGCAAGAGTATTCCCCGCGT...CTTGCCAAACTGAGTGTCCATGCTCTGAGTCGCCTTGGAGGGTATTTGGCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR CCA 72 bp GAGAAAGGCAGTAAGAGTTTGCTTCAACGTATCAGCTaGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGT +
Preference number: 3 (lower is better)
Translates to: EKGSKSLLQRIS*RNVDLALAFQR
Trigger: ACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
3UTR-3UTR CAA 90 bp AACCAGGAGAAAGGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGATGGCCACGCAGACTaGATGCAGGAGAGGGAAATA +
Preference number: 3 (lower is better)
Translates to: NQEKGSKSLLQRISWRNVDGHAD*MQEREI
Trigger: TATTTCCCTCTCCTGCATCAAGTCTGCGTGGCCATC...CACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTTCTCCTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
3UTR-3UTR CAA 90 bp AGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCAGCAGTCTTTTCACTTaGGGTAGAGGCCGAATGATG +
Preference number: 3 (lower is better)
Translates to: SKSLLQRISWRNVDLALASSLFT*GRGRMM
Trigger: CATCATTCGGCCTCTACCCAAAGTGAAAAGACTGCT...GGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR-3UTR CAA 90 bp GCTTCACAGGCTAGACCAACAGTATCTGCTCGCTTTTTCATTCCATTCATCAGTCAGGCAACTTCCAGTTaGCCTCAGGGTTGTCCTGCT +
Preference number: 3 (lower is better)
Translates to: ASQARPTVSARFFIPFISQATSS*PQGCPA
Trigger: AGCAGGACAACCCTGAGGCAAACTGGAAGTTGCCTG...ACTGATGAATGGAATGAAAAAGCGAGCAGATACTGTTGGTCTAGCCTGTGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR GCA 72 bp GGCACTCTTAGGAATGGCATTGTTCCTATGATTCATTaGCTGGATAACTTTGGGAAGATGGCCCAATGGCGG +
Preference number: 3 (lower is better)
Translates to: GTLRNGIVPMIH*LDNFGKMAQWR
Trigger: CCGCCATTGGGCCATCTTCCCAAAGTTATCCAGGCAATGAATCATAGGAACAATGCCATTCCTAAGAGTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR CCA 72 bp CTGCTCGCTTTTTCATTCCATTCATCAGTGGGCCAATaGTCTCTAAAGATGCCATGGCTCGAACACACAGCT +
Preference number: 3 (lower is better)
Translates to: LLAFSFHSSVGQ*SLKMPWLEHTA
Trigger: AGCTGTGTGTTCGAGCCATGGCATCTTTAGAGACCATTGGCCCACTGATGAATGGAATGAAAAAGCGAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR-3UTR CAA 90 bp GCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGAAAGGCAGTAAGAGTTaGCTTCAACGTATCAGCTGG +
Preference number: 3 (lower is better)
Translates to: AVRVCFNVSAGGMWTWHWKGSKS*LQRISW
Trigger: CCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTT...CCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
3UTR-3UTR CAA 90 bp CACAGGCTAGACCAACAGTATCTGCTCGCTTTTTCATTCCATTCATCAGTGGGCAAAAAGTTCTGCTGTTaGGGCTCGAACCTGTGGATG +
Preference number: 3 (lower is better)
Translates to: HRLDQQYLLAFSFHSSVGKKFCC*GSNLWM
Trigger: CATCCACAGGTTCGAGCCCAAACAGCAGAACTTTTT...GCCCACTGATGAATGGAATGAAAAAGCGAGCAGATACTGTTGGTCTAGCCTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR-3UTR CAA 90 bp ACCAGGAGAAAGGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGAAAGGCAGTAAGAGTTaGCTTCAACGTATCAGCTGG +
Preference number: 3 (lower is better)
Translates to: TRRKAVRVCFNVSAGGMWKGSKS*LQRISW
Trigger: CCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTT...CCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTTCTCCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
3UTR TCA 72 bp ACCCGAATGGCACTCTTAGGAATGGCATTGTTCCTATaGTTCATTGCCTGGATAACTTTGGGAAGATGGCCC +
Preference number: 3 (lower is better)
Translates to: TRMALLGMALFL*FIAWITLGRWP
Trigger: GGGCCATCTTCCCAAAGTTATCCAGGCAATGAATCATAGGAACAATGCCATTCCTAAGAGTGCCATTCGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR TCA 72 bp AAACTTCGAGTCATTGCCTTGAGAGCTTTAACAATCTaGGCCTTAGTGGCTGCTGGGCTGTCCAGGTTTTCA +
Preference number: 3 (lower is better)
Translates to: KLRVIALRALTI*ALVAAGLSRFS
Trigger: TGAAAACCTGGACAGCCCAGCAGCCACTAAGGCTCAGATTGTTAAAGCTCTCAAGGCAATGACTCGAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR GCA 72 bp CACTGTCATGAAACCAGGAGAAAGGCAGTAAGAGTTTaGTTCAACGTATCAGCTGGAGGAATGTGGACTTGG +
Preference number: 3 (lower is better)
Translates to: HCHETRRKAVRV*FNVSAGGMWTW
Trigger: CCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTTCTCCTGGTTTCATGACAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
3UTR CCA 72 bp GTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTaGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTC +
Preference number: 3 (lower is better)
Translates to: VRVCFNVSAGGM*TWHWPFSVYCL
Trigger: GAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
3UTR CCA 72 bp CATTCATCAGTGGGCCAATGGTCTCTAAAGATGCCATaGCTCGAACACACAGCTCATTTTCAGACAAGGCAT +
Preference number: 3 (lower is better)
Translates to: HSSVGQWSLKMP*LEHTAHFQTRH
Trigger: ATGCCTTGTCTGAAAATGAGCTGTGTGTTCGAGCCATGGCATCTTTAGAGACCATTGGCCCACTGATGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR-3UTR CAA 90 bp AACCAGGAGAAAGGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGTGTACCCACTTATGTaGATCCACAGAGTGCTTTCT +
Preference number: 3 (lower is better)
Translates to: NQEKGSKSLLQRISWRNVVYPLM*IHRVLS
Trigger: AGAAAGCACTCTGTGGATCAACATAAGTGGGTACAC...CACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTTCTCCTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
3UTR-3UTR CAA 90 bp TGCATCCGATCAGCATCCTTCTCAGGTACGAGATCTGAGCTTTCCAAGTATGCCGTTTCAACAAGTTTGTaGCAGTTGCATTATCAGCTG +
Preference number: 3 (lower is better)
Translates to: CIRSASFSGTRSELSKYAVSTSL*QLHYQL
Trigger: CAGCTGATAATGCAACTGCAACAAACTTGTTGAAAC...GGCATACTTGGAAAGCTCAGATCTCGTACCTGAGAAGGATGCTGATCGGATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR-3UTR CAA 90 bp CAGAGATCCTTGATGATGCTAGGCATTTCCGTGATCTTCTCTCGGCATTCCTCACCCAGCATCTGGTTTTaGCATTTAACATTCCTTTGG +
Preference number: 3 (lower is better)
Translates to: QRSLMMLGISVIFSRHSSPSIWF*HLTFLW
Trigger: CCAAAGGAATGTTAAATGCAAAAACCAGATGCTGGG...TGAGGAATGCCGAGAGAAGATCACGGAAATGCCTAGCATCATCAAGGATCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR TCA 72 bp GATAAAGTGCTCTTGTGTTACTCTGAAGACGAGGTGTaGAATCCGCGAGATGGGCAGCAATCTTCTCTATCA +
Preference number: 3 (lower is better)
Translates to: DKVLLCYSEDEV*NPRDGQQSSLS
Trigger: TGATAGAGAAGATTGCTGCCCATCTCGCGGATTTCACACCTCGTCTTCAGAGTAACACAAGAGCACTTTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR-3UTR CAA 90 bp GCTTTCAGAAGGTTAATGATTGAGGATGCCAGTGAAGGGTGCAGGGACAAAACCGCCTTTCAGCGTTTATaGTCTCTCGTGAATATTTCA +
Preference number: 3 (lower is better)
Translates to: AFRRLMIEDASEGCRDKTAFQRL*SLVNIS
Trigger: TGAAATATTCACGAGAGACAATAAACGCTGAAAGGC...GGTTTTGTCCCTGCACCCTTCACTGGCATCCTCAATCATTAACCTTCTGAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR-3UTR CAA 90 bp CATGAAACCAGGAGAAAGGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAACAAGTTTGTTGCAGTaGCATTATCAGCTGTCCAGA +
Preference number: 3 (lower is better)
Translates to: HETRRKAVRVCFNVSAGGTSLLQ*HYQLSR
Trigger: TCTGGACAGCTGATAATGCAACTGCAACAAACTTGT...TCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTTCTCCTGGTTTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR-3UTR CAA 90 bp TTCTTGCATCTCATGAAATCCATACGGGCCACTCCTTTCTTTGTCTGCGTTGCCTGCGTTTCAACAAGTTaGTTGCAGTTGCATTATCAG +
Preference number: 3 (lower is better)
Translates to: FLHLMKSIRATPFFVCVACVSTS*LQLHYQ
Trigger: CTGATAATGCAACTGCAACAAACTTGTTGAAACGCA...GGCAACGCAGACAAAGAAAGGAGTGGCCCGTATGGATTTCATGAGATGCAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR TCA 72 bp CAAATCATGTTTCTGATCTTTGAAGGCACTCCAGACTaGAGAACGGCACAGGATTTCATTCACCTGTTCTCC +
Preference number: 3 (lower is better)
Translates to: QIMFLIFEGTPD*RTAQDFIHLFS
Trigger: GGAGAACAGGTGAATGAAATCCTGTGCCGTTCTTCAGTCTGGAGTGCCTTCAAAGATCAGAAACATGATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR GCA 72 bp ATTCACCTGTTCTCCATACTGCAAACTTCGAGTCATTaGCTTGAGAGCTTTAACAATCTGAGCCTTAGTGGC +
Preference number: 3 (lower is better)
Translates to: IHLFSILQTSSH*LESFNNLSLSG
Trigger: GCCACTAAGGCTCAGATTGTTAAAGCTCTCAAGGCAATGACTCGAAGTTTGCAGTATGGAGAACAGGTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR-3UTR CAA 90 bp AGTGACTTAGCCCAATTTTTGTTGACTGTAGCTCAACCCTACAGTCATGCTAGTGACTTAGCCCAATTTTaGTTGACTGTAGCTCAACCC +
Preference number: 3 (lower is better)
Translates to: SDLAQFLLTVAQPYSHASDLAQF*LTVAQP
Trigger: GGGTTGAGCTACAGTCAACAAAAATTGGGCTAAGTC...ACTAGCATGACTGTAGGGTTGAGCTACAGTCAACAAAAATTGGGCTAAGTCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
3UTR-3UTR CAA 90 bp GAAAATATCAACTTAAAGTGCCCAATGCATTCACTCTCAGAACCTGGATTGTATGATGGCCACGCAGACTaGATGCAGGAGAGGGAAATA +
Preference number: 3 (lower is better)
Translates to: ENINLKCPMHSLSEPGLYDGHAD*MQEREI
Trigger: TATTTCCCTCTCCTGCATCAAGTCTGCGTGGCCATC...ATACAATCCAGGTTCTGAGAGTGAATGCATTGGGCACTTTAAGTTGATATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR TCA 72 bp AACAGAAAACCAAGGAGATACCACAAAATTCCAGCCTaGAATAGGTGTGTCTGTAGCCAGAAATCCACAGCA +
Preference number: 3 (lower is better)
Translates to: NRKPRRYHKIPA*NRCVCSQKSTA
Trigger: TGCTGTGGATTTCTGGCTACAGACACACCTATTTCAGGCTGGAATTTTGTGGTATCTCCTTGGTTTTCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR GCA 72 bp CCACTGGCTTCTGATTTATATTCTCTTTTTGAGCAATaGCCATCCTATCCCTCCAGTGCATCAATACAAGAT +
Preference number: 3 (lower is better)
Translates to: PLASDLYSLFEQ*PSYPSSASIQD
Trigger: ATCTTGTATTGATGCACTGGAGGGATAGGATGGGCATTGCTCAAAAAGAGAATATAAATCAGAAGCCAGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR-3UTR CAA 90 bp CATCTCATGAAATCCATACGGGCCACTCCTTTCTTTGTCTGCGTTGCCAAAATATTCCATACTGATCCATaGCTATTTTCACATTGTCTC +
Preference number: 3 (lower is better)
Translates to: HLMKSIRATPFFVCVAKIFHTDP*LFSHCL
Trigger: GAGACAATGTGAAAATAGCAATGGATCAGTATGGAA...TATTTTGGCAACGCAGACAAAGAAAGGAGTGGCCCGTATGGATTTCATGAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR-3UTR CAA 90 bp TGGATAGTTGATTATAGGAATGGGGCAATACTGATAAAGTGCTCTTGTGTTACTGACTTAGCCCAATTTTaGTTGACTGTAGCTCAACCC +
Preference number: 3 (lower is better)
Translates to: WIVDYRNGAILIKCSCVTDLAQF*LTVAQP
Trigger: GGGTTGAGCTACAGTCAACAAAAATTGGGCTAAGTC...AGTAACACAAGAGCACTTTATCAGTATTGCCCCATTCCTATAATCAACTATCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR-3UTR CAA 90 bp TGGATAGTTGATTATAGGAATGGGGCAATACTGATAAAGTGCTCTTGTGTTACTGCAGCTTCAATTACATaGCTTTGCAGTGGTACTGTA +
Preference number: 3 (lower is better)
Translates to: WIVDYRNGAILIKCSCVTAASIT*LCSGTV
Trigger: TACAGTACCACTGCAAAGCAATGTAATTGAAGCTGC...AGTAACACAAGAGCACTTTATCAGTATTGCCCCATTCCTATAATCAACTATCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR-3UTR CAA 90 bp GAAAATATCAACTTAAAGTGCCCAATGCATTCACTCTCAGAACCTGGATTGTATACTGATAAAGTGCTCTaGTGTTACTCTGAAGACGAG +
Preference number: 3 (lower is better)
Translates to: ENINLKCPMHSLSEPGLYTDKVL*CYSEDE
Trigger: CTCGTCTTCAGAGTAACACAAGAGCACTTTATCAGT...ATACAATCCAGGTTCTGAGAGTGAATGCATTGGGCACTTTAAGTTGATATTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR GCA 72 bp ATAGTTGATTATAGGAATGGGGCAATACTGATAAAGTaGTCTTGTGTTACTCTGAAGACGAGGTGTGAAATC +
Preference number: 3 (lower is better)
Translates to: IVDYRNGAILIK*SCVTLKTRCEI
Trigger: GATTTCACACCTCGTCTTCAGAGTAACACAAGAGCACTTTATCAGTATTGCCCCATTCCTATAATCAACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR-3UTR CAA 90 bp CCATATCAAATATGGACTTTCTGTGTTGCTGTTAAGCATCTTCAAAATCTCAGTAAAACAGTACCCTGCTaGGAAAATATCCACACATTG +
Preference number: 3 (lower is better)
Translates to: PYQIWTFCVAVKHLQNLSKTVPC*ENIHTL
Trigger: CAATGTGTGGATATTTTCCAAGCAGGGTACTGTTTT...ACTGAGATTTTGAAGATGCTTAACAGCAACACAGAAAGTCCATATTTGATATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR-3UTR CAA 90 bp CCATATCAAATATGGACTTTCTGTGTTGCTGTTAAGCATCTTCAAAATCTCAGTTTTCACTGCTCCAGATaGCTTCTGGAGTATCAAATT +
Preference number: 3 (lower is better)
Translates to: PYQIWTFCVAVKHLQNLSFHCSR*LLEYQI
Trigger: AATTTGATACTCCAGAAGCAATCTGGAGCAGTGAAA...ACTGAGATTTTGAAGATGCTTAACAGCAACACAGAAAGTCCATATTTGATATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR TCA 90 bp TTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTAGCCCGCTCCTGAGGTaGAGGGGGCTGCTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: LLQRISWRNVDLALAFQRSPLLR*RGLLPV
Trigger: AACTGGCAGCAGCCCCCTTCACCTCAGGAGCGGGCT...ACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509279.1
CDS-3UTR GCA 90 bp CATGAAACCAGGAGAAAGGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAGCCCTGCAGCTCCGCTaGCGCGGGTTCCTGGTGCCG +
Preference number: 4 (lower is better)
Translates to: HETRRKAVRVCFNVSAGGALQLR*RGFLVP
Trigger: CGGCACCAGGAACCCGCGGCAGCGGAGCTGCAGGGC...TCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTTCTCCTGGTTTCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260818.11
CDS-3UTR CCA 90 bp GCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGGCTCAGCTTCCAGAGTaGGATGAGGCGCCCTCCGGC +
Preference number: 4 (lower is better)
Translates to: AVRVCFNVSAGGMWTWHWAQLPE*DEAPSG
Trigger: GCCGGAGGGCGCCTCATCCCACTCTGGAAGCTGAGC...CCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260818.11
CDS-3UTR CCA 90 bp TGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTAGGTCGCCTGCCTCATaGTCTACAGGAGGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: CFNVSAGGMWTWHWPFSVRSPAS*STGGGR
Trigger: CCTGCCACCTCCTGTAGACCATGAGGCAGGCGACCT...AACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
CDS-3UTR CCA 90 bp AACCAGGAGAAAGGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGACCTTCGCGGGAGGCTaGAGAGGCTCCAGCCCTAGC +
Preference number: 4 (lower is better)
Translates to: NQEKGSKSLLQRISWRNVTFAGG*RGSSPS
Trigger: GCTAGGGCTGGAGCCTCTCCAGCCTCCCGCGAAGGT...CACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTTCTCCTGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CCA 90 bp CTATCTGACAGCAGTCTTTTCACTTTGGGTAGAGGCCGAATGATGGCATTGTCTACCTTCGCGGGAGGCTaGAGAGGCTCCAGCCCTAGC +
Preference number: 4 (lower is better)
Translates to: LSDSSLFTLGRGRMMALSTFAGG*RGSSPS
Trigger: GCTAGGGCTGGAGCCTCTCCAGCCTCCCGCGAAGGT...AGACAATGCCATCATTCGGCCTCTACCCAAAGTGAAAAGACTGCTGTCAGATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR TCA 90 bp CTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAAAGCTGGGGTATGGACTaGAGTGGTCGCCATCCATCC +
Preference number: 4 (lower is better)
Translates to: LEECGLGTGLSAFIVSRESWGMD*SGRHPS
Trigger: GGATGGATGGCGACCACTTCAGTCCATACCCCAGCT...TTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp CGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTAGCTGGGGTATGGACTaGAGTGGTCGCCATCCATCC +
Preference number: 4 (lower is better)
Translates to: RISWRNVDLALAFQRLLSSWGMD*SGRHPS
Trigger: GGATGGATGGCGACCACTTCAGTCCATACCCCAGCT...AGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp ATTTCAAGTCTGATAGCCAAGGTCGCCTGCCTCATGGTCTACAGGAGGTGGCAGCAACTCCAGGTCCTGTaGGGTATCCTGCTGTTTGTG +
Preference number: 4 (lower is better)
Translates to: ISSLIAKVACLMVYRRWQQLQVL*GILLFV
Trigger: CACAAACAGCAGGATACCTCACAGGACCTGGAGTTG...CTGCCACCTCCTGTAGACCATGAGGCAGGCGACCTTGGCTATCAGACTTGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CCA 90 bp ACCAGGAGAAAGGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGGGGAAGATGGCCCAATaGCGGGACCTGATCTGCCAG +
Preference number: 4 (lower is better)
Translates to: TRRKAVRVCFNVSAGGMWGKMAQ*RDLICQ
Trigger: CTGGCAGATCAGGTCCCGCCATTGGGCCATCTTCCC...CCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTTCTCCTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CCA 90 bp CAGAGATCCTTGATGATGCTAGGCATTTCCGTGATCTTCTCTCGGCATTCCTCAGGGAAGATGGCCCAATaGCGGGACCTGATCTGCCAG +
Preference number: 4 (lower is better)
Translates to: QRSLMMLGISVIFSRHSSGKMAQ*RDLICQ
Trigger: CTGGCAGATCAGGTCCCGCCATTGGGCCATCTTCCC...TGAGGAATGCCGAGAGAAGATCACGGAAATGCCTAGCATCATCAAGGATCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CCA 90 bp ATTTCAAGTCTGATAGCCAAGGTCGCCTGCCTCATGGTCTACAGGAGGTGGCAGTCAGCTGGAGGAATGTaGACTTGGCACTGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: ISSLIAKVACLMVYRRWQSAGGM*TWHWPF
Trigger: GAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGA...CTGCCACCTCCTGTAGACCATGAGGCAGGCGACCTTGGCTATCAGACTTGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509279.1
ENST00000650455.1
3UTR CAA 72 bp TACCCTCCAAGGCGACTCAGAGCATGGACACTCAGTTaGGCAAGGCTGTTTGCTACCTCCTGCTGGTTTGTT +
Preference number: 4 (lower is better)
Translates to: YPPRRLRAWTLS*ARLFATSCWFV
Trigger: AACAAACCAGCAGGAGGTAGCAAACAGCCTTGCCAAACTGAGTGTCCATGCTCTGAGTCGCCTTGGAGGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR TCA 90 bp CTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATCTGAAGACGAGGTGTaGAATCCGCGAGATGGGCAG +
Preference number: 4 (lower is better)
Translates to: LEECGLGTGLSAFIVSRESEDEV*NPRDGQ
Trigger: CTGCCCATCTCGCGGATTTCACACCTCGTCTTCAGA...TTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp TGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTGCCAGCTGAGGTTGTaGGCTGAAGAGACACACTGT +
Preference number: 4 (lower is better)
Translates to: CFNVSAGGMWTWHWPFSVCQLRL*AEETHC
Trigger: ACAGTGTGTCTCTTCAGCGCACAACCTCAGCTGGCA...AACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CCA 90 bp CTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAAGGGTATGGACTGAAGTaGTCGCCATCCATCCATGCC +
Preference number: 4 (lower is better)
Translates to: LEECGLGTGLSAFIVSREGYGLK*SPSIHA
Trigger: GGCATGGATGGATGGCGACCACTTCAGTCCATACCC...TTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CCA 90 bp AACCAGGAGAAAGGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGAGGTCGCCTGCCTCATaGTCTACAGGAGGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: NQEKGSKSLLQRISWRNVRSPAS*STGGGR
Trigger: CCTGCCACCTCCTGTAGACCATGAGGCAGGCGACCT...CACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTTCTCCTGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
CDS-3UTR CCA 90 bp CTATCTGACAGCAGTCTTTTCACTTTGGGTAGAGGCCGAATGATGGCATTGTCTAGGTCGCCTGCCTCATaGTCTACAGGAGGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LSDSSLFTLGRGRMMALSRSPAS*STGGGR
Trigger: CCTGCCACCTCCTGTAGACCATGAGGCAGGCGACCT...AGACAATGCCATCATTCGGCCTCTACCCAAAGTGAAAAGACTGCTGTCAGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CCA 90 bp GCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGAATAGTCTTGGATGGTaGGGGGAGGATGGCCACGCA +
Preference number: 4 (lower is better)
Translates to: AVRVCFNVSAGGMWTWHWNSLGW*GEDGHA
Trigger: TGCGTGGCCATCCTCCCCCCACCATCCAAGACTATT...CCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp GCTTTCAGAAGGTTAATGATTGAGGATGCCAGTGAAGGGTGCAGGGACAAAACCCATCAACAGGCATGCTaGGTAACCCCCATCGCTGAC +
Preference number: 4 (lower is better)
Translates to: AFRRLMIEDASEGCRDKTHQQAC*VTPIAD
Trigger: GTCAGCGATGGGGGTTACTCAGCATGCCTGTTGATG...GGTTTTGTCCCTGCACCCTTCACTGGCATCCTCAATCATTAACCTTCTGAAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp TTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTGCTAAGAACCTGAGGTaGAGGCTCTCTACTTCCTCA +
Preference number: 4 (lower is better)
Translates to: LLQRISWRNVDLALAFQRAKNLR*RLSTSS
Trigger: TGAGGAAGTAGAGAGCCTTCACCTCAGGTTCTTAGC...ACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp CGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTTGGGTAGAGGCCGAATaGTGGCATTGTCTTGATCCC +
Preference number: 4 (lower is better)
Translates to: RISWRNVDLALAFQRLLSWVEAE*WHCLDP
Trigger: GGGATCAAGACAATGCCATCATTCGGCCTCTACCCA...AGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260818.11
CDS-3UTR TCA 90 bp ATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCATCTCCATGTTGCTCTaGCTCCACTTTTGCCGCGTG +
Preference number: 4 (lower is better)
Translates to: ISWRNVDLALAFQRLLSLISMLL*LHFCRV
Trigger: CACGCGGCAAAAGTGGAGTCAGAGCAACATGGAGAT...GAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp AACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTGCTGAGGTTGTGCGCTaGAGAGACACACTGTTGCCA +
Preference number: 4 (lower is better)
Translates to: NVSAGGMWTWHWPFSVYCAEVVR*RDTLLP
Trigger: TGGCAACAGTGTGTCTCTTCAGCGCACAACCTCAGC...ACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp ATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGAAGGCACTCCAGACTaGAGAACGGCACAGGATTTC +
Preference number: 4 (lower is better)
Translates to: ISWRNVDLALAFQRLLSLEGTPD*RTAQDF
Trigger: GAAATCCTGTGCCGTTCTTCAGTCTGGAGTGCCTTC...GAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
CDS-3UTR GCA 90 bp GCTTTCAGAAGGTTAATGATTGAGGATGCCAGTGAAGGGTGCAGGGACAAAACCTCCGCCTCCTCCCTCTaGCTCTCAGAGTTTCACTCT +
Preference number: 4 (lower is better)
Translates to: AFRRLMIEDASEGCRDKTSASSL*LSEFHS
Trigger: AGAGTGAAACTCTGAGAGGCAGAGGGAGGAGGCGGA...GGTTTTGTCCCTGCACCCTTCACTGGCATCCTCAATCATTAACCTTCTGAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260818.11
CDS-3UTR GCA 90 bp GCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGGGCGCCTCATTTCACTaGTCCAGATTGCTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: AVRVCFNVSAGGMWTWHWGASFH*SRLLLE
Trigger: CTCCAGAAGCAATCTGGAGCAGTGAAATGAGGCGCC...CCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp GAGACACCACTTAAGCTGGGGTATGGACTGAAGTGGTCGCCATCCATCCATGCCTTTGGCAAAAAGTTCTaGTGTTTGGGCTCGAACCTG +
Preference number: 4 (lower is better)
Translates to: ETPLKLGYGLKWSPSIHAFGKKF*CLGSNL
Trigger: CAGGTTCGAGCCCAAACAGCAGAACTTTTTGCCAAA...GGCATGGATGGATGGCGACCACTTCAGTCCATACCCCAGCTTAAGTGGTGTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR GCA 90 bp GGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATATTTCAAGTCTTGGCGGGACCTGATCTaGCAGCTGAGGTTGTGCGCT +
Preference number: 4 (lower is better)
Translates to: GLGTGLSAFIVSREYFKSWRDLI*QLRLCA
Trigger: AGCGCACAACCTCAGCTGGCAGATCAGGTCCCGCCA...AGACTTGAAATATTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR GCA 90 bp TTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATATAGCCAAGGTCGCCTaGCTCATGGTCTACAGGAGG +
Preference number: 4 (lower is better)
Translates to: FNVSAGGMWTWHWPFSVYIAKVA*LMVYRR
Trigger: CCTCCTGTAGACCATGAGGCAGGCGACCTTGGCTAT...ATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
CDS-3UTR GCA 90 bp ACCAGGAGAAAGGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGATAGCCAAGGTCGCCTaGCTCATGGTCTACAGGAGG +
Preference number: 4 (lower is better)
Translates to: TRRKAVRVCFNVSAGGMWIAKVA*LMVYRR
Trigger: CCTCCTGTAGACCATGAGGCAGGCGACCTTGGCTAT...CCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTTCTCCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
CDS-3UTR GCA 90 bp CAGCGTTTATTGTCTCTCGTGAATATTTCAAGTCTGATAGCCAAGGTCGCCTGCGGTGAAGGGGGCTGCTaGCAGTTAGAAGGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: QRLLSLVNISSLIAKVACGEGGC*QLEGKE
Trigger: CTCCTTCCCTTCTAACTGGCAGCAGCCCCCTTCACC...GCAGGCGACCTTGGCTATCAGACTTGAAATATTCACGAGAGACAATAAACGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509279.1
CDS-3UTR CCA 90 bp TGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATCTCAGAGTTTCACTCTaGAGGCCGCCATCTTCGCTC +
Preference number: 4 (lower is better)
Translates to: WRNVDLALAFQRLLSLVNLRVSL*RPPSSL
Trigger: GAGCGAAGATGGCGGCCTCCAGAGTGAAACTCTGAG...ATTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260818.11
CDS-3UTR CCA 90 bp ACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCGGAGGAATGTGGACTTaGCACTGGCCTTTCAGCGTT +
Preference number: 4 (lower is better)
Translates to: TYQLEECGLGTGLSAFIVGGMWT*HWPFSV
Trigger: AACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCC...GACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
CDS-3UTR CCA 90 bp ACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCAGCTGGAGGAATGTaGACTTGGCACTGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: TYQLEECGLGTGLSAFIVSAGGM*TWHWPF
Trigger: GAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGA...GACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
3UTR CAA 72 bp TCTCTTCTGAGCTCTTCAGCATTGAGGGCTGAACAGTaGACAGTATGGAAAGCTAGCTCTGTAGCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: SLLSSSALRAEQ*TVWKASSVAAG
Trigger: GCCTGCGGCTACAGAGCTAGCTTTCCATACTGTCAACTGTTCAGCCCTCAATGCTGAAGAGCTCAGAAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR CAA 72 bp TGCCGCGTGTGTGATGGCCATGAATGTGTGCAAGTATaGGGCCTGCGAGCCTATATAATCCAAGAGACTTGC +
Preference number: 4 (lower is better)
Translates to: CRVCDGHECVQV*GLRAYIIQETC
Trigger: GCAAGTCTCTTGGATTATATAGGCTCGCAGGCCCAATACTTGCACACATTCATGGCCATCACACACGCGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR TCA 90 bp CGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCAAGTTCCGCATTTaGAGCAACGACATCCCCTTC +
Preference number: 4 (lower is better)
Translates to: RISWRNVDLALAFQRLLSLKFRI*SNDIPF
Trigger: GAAGGGGATGTCGTTGCTTCAAATGCGGAACTTGAG...AGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp GCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCTCACAGCCTGGAACTaGCTCTCAAGTTCCGCATTT +
Preference number: 4 (lower is better)
Translates to: AVRVCFNVSAGGMWTWHWLTAWN*LSSSAF
Trigger: AAATGCGGAACTTGAGAGTCAGTTCCAGGCTGTGAG...CCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp GCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCATCCATCCATGCCTTaGGCCCAGCATCTGGTTTTT +
Preference number: 4 (lower is better)
Translates to: AVRVCFNVSAGGMWTWHWHPSMP*AQHLVF
Trigger: AAAAACCAGATGCTGGGCTCAAGGCATGGATGGATG...CCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp AGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCCATCCATCCATGCCTTaGGCCCAGCATCTGGTTTTT +
Preference number: 4 (lower is better)
Translates to: SKSLLQRISWRNVDLALAHPSMP*AQHLVF
Trigger: AAAAACCAGATGCTGGGCTCAAGGCATGGATGGATG...GGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp TTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGCGGTCCCTGTCCTTaGGGCAGATTAAGCACTTCA +
Preference number: 4 (lower is better)
Translates to: FNVSAGGMWTWHWPFSVYCGPCP*GRLSTS
Trigger: TGAAGTGCTTAATCTGCCTCAAGGACAGGGACCGCA...ATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp CGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTAGAGCTTTAACAATCTaGGCCTTAGTGGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: RISWRNVDLALAFQRLLSRALTI*ALVAAG
Trigger: CCCAGCAGCCACTAAGGCTCAGATTGTTAAAGCTCT...AGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
CDS-3UTR TCA 90 bp ACCAGGAGAAAGGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGGAAGGCACTCCAGACTaGAGAACGGCACAGGATTTC +
Preference number: 4 (lower is better)
Translates to: TRRKAVRVCFNVSAGGMWEGTPD*RTAQDF
Trigger: GAAATCCTGTGCCGTTCTTCAGTCTGGAGTGCCTTC...CCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTTCTCCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
CDS-3UTR TCA 90 bp TGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTCAGGTTAGACATGACTaGTGTAGATGTACCTGCGGT +
Preference number: 4 (lower is better)
Translates to: CFNVSAGGMWTWHWPFSVQVRHD*CRCTCG
Trigger: ACCGCAGGTACATCTACATCAGTCATGTCTAACCTG...AACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
CDS-3UTR TCA 90 bp CTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAAATGGCCACGCAGACTTaGTGCAGGAGAGGGAAATAT +
Preference number: 4 (lower is better)
Translates to: LEECGLGTGLSAFIVSREMATQT*CRRGKY
Trigger: ATATTTCCCTCTCCTGCATCAAGTCTGCGTGGCCAT...TTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp CGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTATGGCCACGCAGACTTaGTGCAGGAGAGGGAAATAT +
Preference number: 4 (lower is better)
Translates to: RISWRNVDLALAFQRLLSMATQT*CRRGKY
Trigger: ATATTTCCCTCTCCTGCATCAAGTCTGCGTGGCCAT...AGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp ACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCAAGGAGAGACACCTGTaGGGTATCCTGCTGTTTGTG +
Preference number: 4 (lower is better)
Translates to: TYQLEECGLGTGLSAFIVKERHL*GILLFV
Trigger: CACAAACAGCAGGATACCTCACAGGTGTCTCTCCTT...GACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509279.1
CDS-3UTR GCA 90 bp TTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTCGCGGGGAATACTCTTaGCAAAATATAGTACCCGAC +
Preference number: 4 (lower is better)
Translates to: LLQRISWRNVDLALAFQRRGEYS*QNIVPD
Trigger: GTCGGGTACTATATTTTGGCAAGAGTATTCCCCGCG...ACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp TGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATAGGCAACTTCCAGTTTaGCTCAGGGTTGTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: WRNVDLALAFQRLLSLVNRQLPV*LRVVLL
Trigger: CAGCAGGACAACCCTGAGGCAAACTGGAAGTTGCCT...ATTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp AGTGACTTAGCCCAATTTTTGTTGACTGTAGCTCAACCCTACAGTCATGCTAGTTGGCGGGACCTGATCTaGCAGCTGAGGTTGTGCGCT +
Preference number: 4 (lower is better)
Translates to: SDLAQFLLTVAQPYSHASWRDLI*QLRLCA
Trigger: AGCGCACAACCTCAGCTGGCAGATCAGGTCCCGCCA...ACTAGCATGACTGTAGGGTTGAGCTACAGTCAACAAAAATTGGGCTAAGTCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CCA 90 bp ATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTATGCCAGCAAGCCTaGCGGCAAAATGCGTTTCAA +
Preference number: 4 (lower is better)
Translates to: ISWRNVDLALAFQRLLSLVCQQA*RQNAFQ
Trigger: TTGAAACGCATTTTGCCGCCAGGCTTGCTGGCATAC...GAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CCA 90 bp TGCATCCGATCAGCATCCTTCTCAGGTACGAGATCTGAGCTTTCCAAGTATGCCGTAGCTCGGCTTACATaGAGATGTGCAAGGGTAAGC +
Preference number: 4 (lower is better)
Translates to: CIRSASFSGTRSELSKYAVARLT*RCARVS
Trigger: GCTTACCCTTGCACATCTCCATGTAAGCCGAGCTAC...GGCATACTTGGAAAGCTCAGATCTCGTACCTGAGAAGGATGCTGATCGGATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CCA 90 bp GCTTTCAGAAGGTTAATGATTGAGGATGCCAGTGAAGGGTGCAGGGACAAAACCAGGCGACTCAGAGCATaGACACTCAGTTTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: AFRRLMIEDASEGCRDKTRRLRA*TLSLAR
Trigger: CCTTGCCAAACTGAGTGTCCATGCTCTGAGTCGCCT...GGTTTTGTCCCTGCACCCTTCACTGGCATCCTCAATCATTAACCTTCTGAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CCA 90 bp TGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATGGAGGAATGTGGACTTaGCACTGGCCTTTCAGCGTT +
Preference number: 4 (lower is better)
Translates to: WRNVDLALAFQRLLSLVNGGMWT*HWPFSV
Trigger: AACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCC...ATTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
CDS-3UTR CCA 90 bp TGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATTCAGCTGGAGGAATGTaGACTTGGCACTGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: WRNVDLALAFQRLLSLVNSAGGM*TWHWPF
Trigger: GAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGA...ATTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
CDS-3UTR CCA 90 bp AACCAGGAGAAAGGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGAATAGTCTTGGATGGTaGGGGGAGGATGGCCACGCA +
Preference number: 4 (lower is better)
Translates to: NQEKGSKSLLQRISWRNVNSLGW*GEDGHA
Trigger: TGCGTGGCCATCCTCCCCCCACCATCCAAGACTATT...CACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTTCTCCTGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
3UTR CAA 72 bp CCAGCAAGCCTGGCGGCAAAATGCGTTTCAACAAGTTaGTTGCAGTTGCATTATCAGCTGTCCAGAGTCCCA +
Preference number: 4 (lower is better)
Translates to: PASLAAKCVSTS*LQLHYQLSRVP
Trigger: TGGGACTCTGGACAGCTGATAATGCAACTGCAACAAACTTGTTGAAACGCATTTTGCCGCCAGGCTTGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR TCA 90 bp AACCAGGAGAAAGGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGAGTAACCCCCATCGCTaGCCTTTATGGGTTGGTGTC +
Preference number: 4 (lower is better)
Translates to: NQEKGSKSLLQRISWRNVSNPHR*PLWVGV
Trigger: GACACCAACCCATAAAGGTCAGCGATGGGGGTTACT...CACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTTCTCCTGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp GGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATATTTCAAGTCTCATCAACAGGCATGCTaGGTAACCCCCATCGCTGAC +
Preference number: 4 (lower is better)
Translates to: GLGTGLSAFIVSREYFKSHQQAC*VTPIAD
Trigger: GTCAGCGATGGGGGTTACTCAGCATGCCTGTTGATG...AGACTTGAAATATTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR TCA 90 bp AACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCAGGTACGAGATCTaGGCTTTCCAAGTATGCCAG +
Preference number: 4 (lower is better)
Translates to: NVSAGGMWTWHWPFSVYCLRYEI*AFQVCQ
Trigger: CTGGCATACTTGGAAAGCTCAGATCTCGTACCTGAG...ACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp ACCGGGTCTTTAATTGGCCAATCTGGAAACCGGAGTGTATCACACAGTTGTTTGATCTCCATGTTGCTCTaGCTCCACTTTTGCCGCGTG +
Preference number: 4 (lower is better)
Translates to: TGSLIGQSGNRSVSHSCLISMLL*LHFCRV
Trigger: CACGCGGCAAAAGTGGAGTCAGAGCAACATGGAGAT...CAAACAACTGTGTGATACACTCCGGTTTCCAGATTGGCCAATTAAAGACCCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR TCA 90 bp GAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATATGAAGGCACTCCAGACTaGAGAACGGCACAGGATTTC +
Preference number: 4 (lower is better)
Translates to: EECGLGTGLSAFIVSREYEGTPD*RTAQDF
Trigger: GAAATCCTGTGCCGTTCTTCAGTCTGGAGTGCCTTC...ATATTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
CDS-3UTR TCA 90 bp TTCAGCCAAATACCCTCCAAGGCGACTCAGAGCATGGACACTCAGTTTGGCAAGCATGTTTCTGATCTTTaGAGGCACTCCAGACTGAAG +
Preference number: 4 (lower is better)
Translates to: FSQIPSKATQSMDTQFGKHVSDL*RHSRLK
Trigger: CTTCAGTCTGGAGTGCCTTCAAAGATCAGAAACATG...CTTGCCAAACTGAGTGTCCATGCTCTGAGTCGCCTTGGAGGGTATTTGGCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR TCA 90 bp ACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCCAGGTTAGACATGACTaGTGTAGATGTACCTGCGGT +
Preference number: 4 (lower is better)
Translates to: TYQLEECGLGTGLSAFIVQVRHD*CRCTCG
Trigger: ACCGCAGGTACATCTACATCAGTCATGTCTAACCTG...GACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
CDS-3UTR TCA 90 bp ACCAGGAGAAAGGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGTGGGTAGAGGCCGAATaGTGGCATTGTCTTGATCCT +
Preference number: 4 (lower is better)
Translates to: TRRKAVRVCFNVSAGGMWWVEAE*WHCLDP
Trigger: AGGATCAAGACAATGCCATCATTCGGCCTCTACCCA...CCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTTCTCCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR GCA 90 bp AACCAGGAGAAAGGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGAAACCAGCTTTGGATaGCACAAGCCTCCTCACAGC +
Preference number: 4 (lower is better)
Translates to: NQEKGSKSLLQRISWRNVETSFG*HKPPHS
Trigger: GCTGTGAGGAGGCTTGTGGCATCCAAAGCTGGTTTC...CACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTTCTCCTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp AGGTCGCCTGCCTCATGGTCTACAGGAGGTGGCAGGTTAGACATGACTGATGTAACCTTCCTCTATTATTaGCTTCATAACCAACCCAGC +
Preference number: 4 (lower is better)
Translates to: RSPASWSTGGGRLDMTDVTFLYY*LHNQPS
Trigger: GCTGGGTTGGTTATGAAGGCAATAATAGAGGAAGGT...TACATCAGTCATGTCTAACCTGCCACCTCCTGTAGACCATGAGGCAGGCGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR GCA 90 bp AACCAGGAGAAAGGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGGCGCCTCATTTCACTaGTCCAGATTGCTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: NQEKGSKSLLQRISWRNVGASFH*SRLLLE
Trigger: CTCCAGAAGCAATCTGGAGCAGTGAAATGAGGCGCC...CACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTTCTCCTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp CTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATTTGGCAAGGCTGTTTaGTACCTCCTGCTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: LEECGLGTGLSAFIVSREFGKAV*YLLLVC
Trigger: ACAAACCAGCAGGAGGTAGCAAACAGCCTTGCCAAA...TTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp GCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGTTTGGCAAGGCTGTTTaGTACCTCCTGCTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: AVRVCFNVSAGGMWTWHWFGKAV*YLLLVC
Trigger: ACAAACCAGCAGGAGGTAGCAAACAGCCTTGCCAAA...CCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp TTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTGAGACTTGCAGCAAATaGTTTTGGAACCTCCAGTTG +
Preference number: 4 (lower is better)
Translates to: LLQRISWRNVDLALAFQRETCSK*FWNLQL
Trigger: CAACTGGAGGTTCCAAAAGCATTTGCTGCAAGTCTC...ACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp ACCGGGTCTTTAATTGGCCAATCTGGAAACCGGAGTGTATCACACAGTTGTTTGAGGCAACTTCCAGTTTaGCTCAGGGTTGTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: TGSLIGQSGNRSVSHSCLRQLPV*LRVVLL
Trigger: CAGCAGGACAACCCTGAGGCAAACTGGAAGTTGCCT...CAAACAACTGTGTGATACACTCCGGTTTCCAGATTGGCCAATTAAAGACCCGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR GCA 90 bp TGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTGAAGAGACACACTGTTaGCATTGTCAAGGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: CFNVSAGGMWTWHWPFSVEETHC*HCQGFQ
Trigger: CTGGAAACCTTGACAATGGCAACAGTGTGTCTCTTC...AACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CCA 90 bp TTGTCTCTCGTGAATATTTCAAGTCTGATAGCCAAGGTCGCCTGCCTCATGGTCGTATGCCAGCAAGCCTaGCGGCAAAATGCGTTTCAA +
Preference number: 4 (lower is better)
Translates to: LSLVNISSLIAKVACLMVVCQQA*RQNAFQ
Trigger: TTGAAACGCATTTTGCCGCCAGGCTTGCTGGCATAC...GACCATGAGGCAGGCGACCTTGGCTATCAGACTTGAAATATTCACGAGAGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CCA 90 bp AACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTGTAGCTCGGCTTACATaGAGATGTGCAAGGGTAAGC +
Preference number: 4 (lower is better)
Translates to: NVSAGGMWTWHWPFSVYCVARLT*RCARVS
Trigger: GCTTACCCTTGCACATCTCCATGTAAGCCGAGCTAC...ACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CCA 90 bp CGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTGTGAAATCCGCGAGATaGGCAGCAATCTTCTCTATC +
Preference number: 4 (lower is better)
Translates to: RISWRNVDLALAFQRLLSVKSAR*AAIFSI
Trigger: GATAGAGAAGATTGCTGCCCATCTCGCGGATTTCAC...AGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CCA 90 bp ACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCAACCGGGTCTTTAATTaGCCAATCTGGAAACCGGAG +
Preference number: 4 (lower is better)
Translates to: TYQLEECGLGTGLSAFIVNRVFN*PIWKPE
Trigger: CTCCGGTTTCCAGATTGGCCAATTAAAGACCCGGTT...GACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CCA 90 bp ATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCCATGTCCCTCCCTTCTaGATTCTTATCAGGGTGGTA +
Preference number: 4 (lower is better)
Translates to: ISWRNVDLALAFQRLLSLHVPPF*ILIRVV
Trigger: TACCACCCTGATAAGAATCCAGAAGGGAGGGACATG...GAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CCA 90 bp GAGACACCACTTAAGCTGGGGTATGGACTGAAGTGGTCGCCATCCATCCATGCCTATATTCTCTGGATCTaGCCCATCCACTATTTTTGC +
Preference number: 4 (lower is better)
Translates to: ETPLKLGYGLKWSPSIHAYILWI*PIHYFC
Trigger: GCAAAAATAGTGGATGGGCCAGATCCAGAGAATATA...GGCATGGATGGATGGCGACCACTTCAGTCCATACCCCAGCTTAAGTGGTGTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CCA 90 bp CGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCATGGACACTCAGTTTaGCAAGGCTGTTTGCTACCT +
Preference number: 4 (lower is better)
Translates to: RISWRNVDLALAFQRLLSHGHSV*QGCLLP
Trigger: AGGTAGCAAACAGCCTTGCCAAACTGAGTGTCCATG...AGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CCA 90 bp TTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTATGTGGACTTGGCACTaGCCTTTCAGCGTTTATTGT +
Preference number: 4 (lower is better)
Translates to: LLQRISWRNVDLALAFQRMWTWH*PFSVYC
Trigger: ACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACAT...ACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
CDS-3UTR CCA 90 bp ACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCCTTCAACGTATCAGCTaGAGGAATGTGGACTTGGCA +
Preference number: 4 (lower is better)
Translates to: TYQLEECGLGTGLSAFIVLQRIS*RNVDLA
Trigger: TGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAG...GACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
CDS-3UTR CCA 90 bp TGCATCCGATCAGCATCCTTCTCAGGTACGAGATCTGAGCTTTCCAAGTATGCCCTTCAACGTATCAGCTaGAGGAATGTGGACTTGGCA +
Preference number: 4 (lower is better)
Translates to: CIRSASFSGTRSELSKYALQRIS*RNVDLA
Trigger: TGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAG...GGCATACTTGGAAAGCTCAGATCTCGTACCTGAGAAGGATGCTGATCGGATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR CAA 72 bp GCAAGCCTGGCGGCAAAATGCGTTTCAACAAGTTTGTaGCAGTTGCATTATCAGCTGTCCAGAGTCCCACTA +
Preference number: 4 (lower is better)
Translates to: ASLAAKCVSTSL*QLHYQLSRVPL
Trigger: TAGTGGGACTCTGGACAGCTGATAATGCAACTGCAACAAACTTGTTGAAACGCATTTTGCCGCCAGGCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR TCA 90 bp ACCGGGTCTTTAATTGGCCAATCTGGAAACCGGAGTGTATCACACAGTTGTTTGCTCAAGTTCCGCATTTaGAGCAACGACATCCCCTTC +
Preference number: 4 (lower is better)
Translates to: TGSLIGQSGNRSVSHSCLLKFRI*SNDIPF
Trigger: GAAGGGGATGTCGTTGCTTCAAATGCGGAACTTGAG...CAAACAACTGTGTGATACACTCCGGTTTCCAGATTGGCCAATTAAAGACCCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR TCA 90 bp GCTTTCAGAAGGTTAATGATTGAGGATGCCAGTGAAGGGTGCAGGGACAAAACCCGAAACTTTGGAAGCTaGGTGAAAGCCAGGAAACCA +
Preference number: 4 (lower is better)
Translates to: AFRRLMIEDASEGCRDKTRNFGS*VKARKP
Trigger: TGGTTTCCTGGCTTTCACTCAGCTTCCAAAGTTTCG...GGTTTTGTCCCTGCACCCTTCACTGGCATCCTCAATCATTAACCTTCTGAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp GGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGATTCCAAATAAGGTTTaGCCTGGCATGGTCTTGACC +
Preference number: 4 (lower is better)
Translates to: GSKSLLQRISWRNVDLALIPNKV*PGMVLT
Trigger: GGTCAAGACCATGCCAGGTCAAACCTTATTTGGAAT...CAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp AGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCAATTCTTGCATCTCATaGAATCCATACGGGCCACTC +
Preference number: 4 (lower is better)
Translates to: SKSLLQRISWRNVDLALANSCIS*NPYGPL
Trigger: GAGTGGCCCGTATGGATTTCATGAGATGCAAGAATT...GGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp TGGTATAACAAAATAGCAACCTTCTCAACAAGGATAGGGTCAAAGGTCAGCAGTAGCTGGGGTATGGACTaGAGTGGTCGCCATCCATCC +
Preference number: 4 (lower is better)
Translates to: WYNKIATFSTRIGSKVSSSWGMD*SGRHPS
Trigger: GGATGGATGGCGACCACTTCAGTCCATACCCCAGCT...ACTGCTGACCTTTGACCCTATCCTTGTTGAGAAGGTTGCTATTTTGTTATACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506813.1
ENST00000650455.1
CDS-3UTR TCA 90 bp ATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCAAGGTCAGCAGTAGCTaGATAATATGGGGAAGGCAA +
Preference number: 4 (lower is better)
Translates to: ISWRNVDLALAFQRLLSLKVSSS*IIWGRQ
Trigger: TTGCCTTCCCCATATTATTCAGCTACTGCTGACCTT...GAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp CGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTAAGGTCAGCAGTAGCTaGATAATATGGGGAAGGCAA +
Preference number: 4 (lower is better)
Translates to: RISWRNVDLALAFQRLLSKVSSS*IIWGRQ
Trigger: TTGCCTTCCCCATATTATTCAGCTACTGCTGACCTT...AGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp TGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTTGTCTCTTCTGACTTaGAAGCCTGTTTGGTATGTG +
Preference number: 4 (lower is better)
Translates to: CFNVSAGGMWTWHWPFSVLSLLT*KPVWYV
Trigger: CACATACCAAACAGGCTTTCAAGTCAGAAGAGACAA...AACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp ACCAGGAGAAAGGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGGCTCTTGTGTTACTCTaGAGACGAGGTGTGAAATCC +
Preference number: 4 (lower is better)
Translates to: TRRKAVRVCFNVSAGGMWALVLL*RRGVKS
Trigger: GGATTTCACACCTCGTCTTCAGAGTAACACAAGAGC...CCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTTCTCCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp CATCTCATGAAATCCATACGGGCCACTCCTTTCTTTGTCTGCGTTGCCAAAATATGCGGTCCCTGTCCTTaGGGCAGATTAAGCACTTCA +
Preference number: 4 (lower is better)
Translates to: HLMKSIRATPFFVCVAKICGPCP*GRLSTS
Trigger: TGAAGTGCTTAATCTGCCTCAAGGACAGGGACCGCA...TATTTTGGCAACGCAGACAAAGAAAGGAGTGGCCCGTATGGATTTCATGAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR TCA 90 bp AGGTCGCCTGCCTCATGGTCTACAGGAGGTGGCAGGTTAGACATGACTGATGTACTGGATTGTATTTTATaGCATTTCTCAGAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: RSPASWSTGGGRLDMTDVLDCIL*HFSEPP
Trigger: TGGAGGCTCTGAGAAATGTCATAAAATACAATCCAG...TACATCAGTCATGTCTAACCTGCCACCTCCTGTAGACCATGAGGCAGGCGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR TCA 90 bp CGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTTCAGGGTTGTCCTGCTaGTTTTTAAAGTGCTCTAGC +
Preference number: 4 (lower is better)
Translates to: RISWRNVDLALAFQRLLSSGLSC*FLKCSS
Trigger: GCTAGAGCACTTTAAAAATCAGCAGGACAACCCTGA...AGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp ACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCCAGAGTTTCTCCATaGGGATTGTTCTTCTCTAGG +
Preference number: 4 (lower is better)
Translates to: TYQLEECGLGTGLSAFIVSRVSP*GLFFSR
Trigger: CCTAGAGAAGAACAATCCTCATGGAGAAACTCTGGA...GACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp GTTGCATTATCAGCTGTCCAGAGTCCCACTAAATGTCTACTTAGCTGTCTGAAAGCTGAGGTTGTGCGCTaGAGAGACACACTGTTGCCA +
Preference number: 4 (lower is better)
Translates to: VALSAVQSPTKCLLSCLKAEVVR*RDTLLP
Trigger: TGGCAACAGTGTGTCTCTTCAGCGCACAACCTCAGC...TTTCAGACAGCTAAGTAGACATTTAGTGGGACTCTGGACAGCTGATAATGCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR TCA 90 bp ATTTCAAGTCTGATAGCCAAGGTCGCCTGCCTCATGGTCTACAGGAGGTGGCAGTCACTCTGCTCCTTCTaGAACATTCGATTAATTGCT +
Preference number: 4 (lower is better)
Translates to: ISSLIAKVACLMVYRRWQSLCSF*NIRLIA
Trigger: AGCAATTAATCGAATGTTTCAGAAGGAGCAGAGTGA...CTGCCACCTCCTGTAGACCATGAGGCAGGCGACCTTGGCTATCAGACTTGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR TCA 90 bp GAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATATAGAGCTTTAACAATCTaGGCCTTAGTGGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: EECGLGTGLSAFIVSREYRALTI*ALVAAG
Trigger: CCCAGCAGCCACTAAGGCTCAGATTGTTAAAGCTCT...ATATTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
CDS-3UTR TCA 90 bp GGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGCATGTTTCTGATCTTTaGAGGCACTCCAGACTGAAG +
Preference number: 4 (lower is better)
Translates to: GSKSLLQRISWRNVDLALHVSDL*RHSRLK
Trigger: CTTCAGTCTGGAGTGCCTTCAAAGATCAGAAACATG...CAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
CDS-3UTR TCA 90 bp AACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCAGGTTAGACATGACTaGTGTAGATGTACCTGCGGT +
Preference number: 4 (lower is better)
Translates to: NVSAGGMWTWHWPFSVYCQVRHD*CRCTCG
Trigger: ACCGCAGGTACATCTACATCAGTCATGTCTAACCTG...ACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
CDS-3UTR GCA 90 bp CGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTGGTTCTTCCATTGGATaGTACCATCTCCAAGAGCAT +
Preference number: 4 (lower is better)
Translates to: RISWRNVDLALAFQRLLSGSSIG*YHLQEH
Trigger: ATGCTCTTGGAGATGGTAGCATCCAATGGAAGAACC...AGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp ATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCAGCCTGGCGGCAAAATaGGTTTCAACAAGTTTGTTG +
Preference number: 4 (lower is better)
Translates to: ISWRNVDLALAFQRLLSLSLAAK*VSTSLL
Trigger: CAACAAACTTGTTGAAACGCATTTTGCCGCCAGGCT...GAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp TGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTATCCTATCCCTCCAGTaGATCAATACAAGATCCACT +
Preference number: 4 (lower is better)
Translates to: CFNVSAGGMWTWHWPFSVILSLQ*INTRST
Trigger: AGTGGATCTTGTATTGATGCACTGGAGGGATAGGAT...AACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp TTCAGCCAAATACCCTCCAAGGCGACTCAGAGCATGGACACTCAGTTTGGCAAGATCCTATCCCTCCAGTaGATCAATACAAGATCCACT +
Preference number: 4 (lower is better)
Translates to: FSQIPSKATQSMDTQFGKILSLQ*INTRST
Trigger: AGTGGATCTTGTATTGATGCACTGGAGGGATAGGAT...CTTGCCAAACTGAGTGTCCATGCTCTGAGTCGCCTTGGAGGGTATTTGGCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR GCA 90 bp AGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTCTCTTTTTGAGCAATaGCCATCCTATCCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SKSLLQRISWRNVDLALASLFEQ*PSYPSS
Trigger: ACTGGAGGGATAGGATGGGCATTGCTCAAAAAGAGA...GGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp ACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCTTTTTGAGCAATaGCCATCCTATCCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: TYQLEECGLGTGLSAFIVSLFEQ*PSYPSS
Trigger: ACTGGAGGGATAGGATGGGCATTGCTCAAAAAGAGA...GACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp ATTTCAAGTCTGATAGCCAAGGTCGCCTGCCTCATGGTCTACAGGAGGTGGCAGTTCACTGCTCCAGATTaGTTCTGGAGTATCAAATTC +
Preference number: 4 (lower is better)
Translates to: ISSLIAKVACLMVYRRWQFTAPD*FWSIKF
Trigger: GAATTTGATACTCCAGAAGCAATCTGGAGCAGTGAA...CTGCCACCTCCTGTAGACCATGAGGCAGGCGACCTTGGCTATCAGACTTGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR GCA 90 bp CGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTGAGACTTGCAGCAAATaGTTTTGGAACCTCCAGTTG +
Preference number: 4 (lower is better)
Translates to: RISWRNVDLALAFQRLLSETCSK*FWNLQL
Trigger: CAACTGGAGGTTCCAAAAGCATTTGCTGCAAGTCTC...AGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp CATGAAACCAGGAGAAAGGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGGCCATGAATGTGTaGAAGTATTGGGCCTGCGAG +
Preference number: 4 (lower is better)
Translates to: HETRRKAVRVCFNVSAGGMAMNV*KYWACE
Trigger: CTCGCAGGCCCAATACTTGCACACATTCATGGCCAT...TCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTTCTCCTGGTTTCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp GAGACACCACTTAAGCTGGGGTATGGACTGAAGTGGTCGCCATCCATCCATGCCGATCAAAGCACCCTTTaGCATTGCTTCTTTGATTAT +
Preference number: 4 (lower is better)
Translates to: ETPLKLGYGLKWSPSIHADQSTL*HCFFDY
Trigger: ATAATCAAAGAAGCAATGGCAAAGGGTGCTTTGATC...GGCATGGATGGATGGCGACCACTTCAGTCCATACCCCAGCTTAAGTGGTGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR GCA 90 bp CATCTCATGAAATCCATACGGGCCACTCCTTTCTTTGTCTGCGTTGCCAAAATATGCCAGCTGAGGTTGTaGGCTGAAGAGACACACTGT +
Preference number: 4 (lower is better)
Translates to: HLMKSIRATPFFVCVAKICQLRL*AEETHC
Trigger: ACAGTGTGTCTCTTCAGCGCACAACCTCAGCTGGCA...TATTTTGGCAACGCAGACAAAGAAAGGAGTGGCCCGTATGGATTTCATGAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR GCA 90 bp CGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTACCTGTTCTCCATACTaGAAACTTCGAGTCATTGCC +
Preference number: 4 (lower is better)
Translates to: RISWRNVDLALAFQRLLSTCSPY*KLRVIA
Trigger: GGCAATGACTCGAAGTTTGCAGTATGGAGAACAGGT...AGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
CDS-3UTR GCA 90 bp TGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTAAGGCAGTAAGAGTTTaGTTCAACGTATCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: CFNVSAGGMWTWHWPFSVKAVRV*FNVSAG
Trigger: TCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTT...AACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
CDS-3UTR CCA 90 bp CATGAAACCAGGAGAAAGGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAACGCTCGCGAAACTTTaGAAGCTGAGTGAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: HETRRKAVRVCFNVSAGGTLAKL*KLSESQ
Trigger: CTGGCTTTCACTCAGCTTCCAAAGTTTCGCGAGCGT...TCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTTCTCCTGGTTTCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CCA 90 bp CTTTCAGCGTTTATTGTCTCTCGTGAATATTTCAAGTCTGATAGCCAAGGTCGCGGGTATGGACTGAAGTaGTCGCCATCCATCCATGCC +
Preference number: 4 (lower is better)
Translates to: LSAFIVSREYFKSDSQGRGYGLK*SPSIHA
Trigger: GGCATGGATGGATGGCGACCACTTCAGTCCATACCC...GCGACCTTGGCTATCAGACTTGAAATATTCACGAGAGACAATAAACGCTGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CCA 90 bp TTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATCATGTCCCTCCCTTCTaGATTCTTATCAGGGTGGTA +
Preference number: 4 (lower is better)
Translates to: FNVSAGGMWTWHWPFSVYHVPPF*ILIRVV
Trigger: TACCACCCTGATAAGAATCCAGAAGGGAGGGACATG...ATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CCA 90 bp GGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGAAAAGTTCTGCTGTTTaGGCTCGAACCTGTGGATGT +
Preference number: 4 (lower is better)
Translates to: GSKSLLQRISWRNVDLALKSSAV*ARTCGC
Trigger: ACATCCACAGGTTCGAGCCCAAACAGCAGAACTTTT...CAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CCA 90 bp AGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTTCAGACAAGGCATaGATAACCCGAATGGCACTC +
Preference number: 4 (lower is better)
Translates to: SKSLLQRISWRNVDLALAFSDKA*ITRMAL
Trigger: GAGTGCCATTCGGGTTATCCATGCCTTGTCTGAAAA...GGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CCA 90 bp TGCATCCGATCAGCATCCTTCTCAGGTACGAGATCTGAGCTTTCCAAGTATGCCTTTTCAGACAAGGCATaGATAACCCGAATGGCACTC +
Preference number: 4 (lower is better)
Translates to: CIRSASFSGTRSELSKYAFSDKA*ITRMAL
Trigger: GAGTGCCATTCGGGTTATCCATGCCTTGTCTGAAAA...GGCATACTTGGAAAGCTCAGATCTCGTACCTGAGAAGGATGCTGATCGGATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CCA 90 bp GCTTTCAGAAGGTTAATGATTGAGGATGCCAGTGAAGGGTGCAGGGACAAAACCTCATCAGTGGGCCAATaGTCTCTAAAGATGCCATGG +
Preference number: 4 (lower is better)
Translates to: AFRRLMIEDASEGCRDKTSSVGQ*SLKMPW
Trigger: CCATGGCATCTTTAGAGACCATTGGCCCACTGATGA...GGTTTTGTCCCTGCACCCTTCACTGGCATCCTCAATCATTAACCTTCTGAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CCA 90 bp ACCAGGAGAAAGGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGCTTCAACGTATCAGCTaGAGGAATGTGGACTTGGCA +
Preference number: 4 (lower is better)
Translates to: TRRKAVRVCFNVSAGGMWLQRIS*RNVDLA
Trigger: TGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAG...CCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTTCTCCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
CDS-3UTR TCA 90 bp GGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGCGCATGAGTTCCAACTaGAAAGACACGCTTATACTT +
Preference number: 4 (lower is better)
Translates to: GSKSLLQRISWRNVDLALRMSSN*KDTLIL
Trigger: AAGTATAAGCGTGTCTTTTCAGTTGGAACTCATGCG...CAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp TTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTTCCTGATCCGCAATaGAATACCTATGTAGTTACC +
Preference number: 4 (lower is better)
Translates to: LLQRISWRNVDLALAFQRFPDPQ*NTYVVT
Trigger: GGTAACTACATAGGTATTTCATTGCGGATCAGGAAA...ACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp TTCAGCCAAATACCCTCCAAGGCGACTCAGAGCATGGACACTCAGTTTGGCAAGTTTCCTGATCCGCAATaGAATACCTATGTAGTTACC +
Preference number: 4 (lower is better)
Translates to: FSQIPSKATQSMDTQFGKFPDPQ*NTYVVT
Trigger: GGTAACTACATAGGTATTTCATTGCGGATCAGGAAA...CTTGCCAAACTGAGTGTCCATGCTCTGAGTCGCCTTGGAGGGTATTTGGCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR TCA 90 bp AGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCCTAAAGGCTCTTTCCTaGTCCGCAATGAAATACCTA +
Preference number: 4 (lower is better)
Translates to: SKSLLQRISWRNVDLALALKALS*SAMKYL
Trigger: TAGGTATTTCATTGCGGATCAGGAAAGAGCCTTTAG...GGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp CTATCTGACAGCAGTCTTTTCACTTTGGGTAGAGGCCGAATGATGGCATTGTCTCGAAACTTTGGAAGCTaGGTGAAAGCCAGGAAACCA +
Preference number: 4 (lower is better)
Translates to: LSDSSLFTLGRGRMMALSRNFGS*VKARKP
Trigger: TGGTTTCCTGGCTTTCACTCAGCTTCCAAAGTTTCG...AGACAATGCCATCATTCGGCCTCTACCCAAAGTGAAAAGACTGCTGTCAGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR TCA 90 bp AGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTGTCTCTTCTGACTTaGAAGCCTGTTTGGTATGTG +
Preference number: 4 (lower is better)
Translates to: SKSLLQRISWRNVDLALALSLLT*KPVWYV
Trigger: CACATACCAAACAGGCTTTCAAGTCAGAAGAGACAA...GGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp CGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTTCTTTATGACGGTTaGAGAGGATGCTCTGTGTTT +
Preference number: 4 (lower is better)
Translates to: RISWRNVDLALAFQRLLSLLYDG*RGCSVF
Trigger: AAACACAGAGCATCCTCTTCAACCGTCATAAAGAAG...AGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp AGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCCTTCTTTATGACGGTTaGAGAGGATGCTCTGTGTTT +
Preference number: 4 (lower is better)
Translates to: SKSLLQRISWRNVDLALALLYDG*RGCSVF
Trigger: AAACACAGAGCATCCTCTTCAACCGTCATAAAGAAG...GGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp GCTTTCAGAAGGTTAATGATTGAGGATGCCAGTGAAGGGTGCAGGGACAAAACCTTCAGCATTGAGGGCTaGACAGTTGACAGTATGGAA +
Preference number: 4 (lower is better)
Translates to: AFRRLMIEDASEGCRDKTFSIEG*TVDSME
Trigger: TTCCATACTGTCAACTGTTCAGCCCTCAATGCTGAA...GGTTTTGTCCCTGCACCCTTCACTGGCATCCTCAATCATTAACCTTCTGAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp ACCAGGAGAAAGGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGTTCAGCATTGAGGGCTaGACAGTTGACAGTATGGAA +
Preference number: 4 (lower is better)
Translates to: TRRKAVRVCFNVSAGGMWFSIEG*TVDSME
Trigger: TTCCATACTGTCAACTGTTCAGCCCTCAATGCTGAA...CCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTTCTCCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp TTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTCCAGAGTTTCTCCATaGGGATTGTTCTTCTCTAGG +
Preference number: 4 (lower is better)
Translates to: FNVSAGGMWTWHWPFSVYSRVSP*GLFFSR
Trigger: CCTAGAGAAGAACAATCCTCATGGAGAAACTCTGGA...ATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp TGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTCACTCTGCTCCTTCTaGAACATTCGATTAATTGCT +
Preference number: 4 (lower is better)
Translates to: CFNVSAGGMWTWHWPFSVSLCSF*NIRLIA
Trigger: AGCAATTAATCGAATGTTTCAGAAGGAGCAGAGTGA...AACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp TTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATCATGTTTCTGATCTTTaGAGGCACTCCAGACTGAAG +
Preference number: 4 (lower is better)
Translates to: FNVSAGGMWTWHWPFSVYHVSDL*RHSRLK
Trigger: CTTCAGTCTGGAGTGCCTTCAAAGATCAGAAACATG...ATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
CDS-3UTR TCA 90 bp TGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTAACAAATCATGTTTCTaGTCTTTGAAGGCACTCCAG +
Preference number: 4 (lower is better)
Translates to: CFNVSAGGMWTWHWPFSVNKSCF*SLKALQ
Trigger: CTGGAGTGCCTTCAAAGATCAGAAACATGATTTGTT...AACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
CDS-3UTR TCA 90 bp AGTGACTTAGCCCAATTTTTGTTGACTGTAGCTCAACCCTACAGTCATGCTAGTCAACTCCAGGTCCTGTaGGGTATCCTGCTGTTTGTG +
Preference number: 4 (lower is better)
Translates to: SDLAQFLLTVAQPYSHASQLQVL*GILLFV
Trigger: CACAAACAGCAGGATACCTCACAGGACCTGGAGTTG...ACTAGCATGACTGTAGGGTTGAGCTACAGTCAACAAAAATTGGGCTAAGTCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp ACCAGGAGAAAGGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGGGAATAACACTGTCATaGAACCAGGAGAAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: TRRKAVRVCFNVSAGGMWGITLS*NQEKGS
Trigger: ACTGCCTTTCTCCTGGTTTCATGACAGTGTTATTCC...CCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTTCTCCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
CDS-3UTR GCA 90 bp ATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCATTATGTTCATTTTGTaGTCAAACCTTCGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: ISWRNVDLALAFQRLLSLIMFIL*SNLRGR
Trigger: CCTCCCGCGAAGGTTTGAGCACAAAATGAACATAAT...GAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp CTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAAAAGAGCATATCAAACTaGTGCCCTTCAGTTGTCTCA +
Preference number: 4 (lower is better)
Translates to: LEECGLGTGLSAFIVSREKSISN*CPSVVS
Trigger: TGAGACAACTGAAGGGCAGCAGTTTGATATGCTCTT...TTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp CGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTACCTTCCTCTATTATTaGCTTCATAACCAACCCAGC +
Preference number: 4 (lower is better)
Translates to: RISWRNVDLALAFQRLLSTFLYY*LHNQPS
Trigger: GCTGGGTTGGTTATGAAGGCAATAATAGAGGAAGGT...AGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp GCTTTCAGAAGGTTAATGATTGAGGATGCCAGTGAAGGGTGCAGGGACAAAACCGTAAACATCGCAGTATaGAAGTGTCGAGGTAAGGCA +
Preference number: 4 (lower is better)
Translates to: AFRRLMIEDASEGCRDKTVNIAV*KCRGKA
Trigger: TGCCTTACCTCGACACTTGCATACTGCGATGTTTAC...GGTTTTGTCCCTGCACCCTTCACTGGCATCCTCAATCATTAACCTTCTGAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp AACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCCAGGAGATCACATTTaGACTTCCAAGTTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: NVSAGGMWTWHWPFSVYCPGDHI*TSKFSV
Trigger: GACAGAGAACTTGGAAGTGCAAATGTGATCTCCTGG...ACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp CAGAGATCCTTGATGATGCTAGGCATTTCCGTGATCTTCTCTCGGCATTCCTCACCAGGAGATCACATTTaGACTTCCAAGTTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: QRSLMMLGISVIFSRHSSPGDHI*TSKFSV
Trigger: GACAGAGAACTTGGAAGTGCAAATGTGATCTCCTGG...TGAGGAATGCCGAGAGAAGATCACGGAAATGCCTAGCATCATCAAGGATCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR GCA 90 bp GTGCTATCTGACAGCAGTCTTTTCACTTTGGGTAGAGGCCGAATGATGGCATTGTATGGGGAAGGCAAGTaGTATCTGACAGCAGTCTTT +
Preference number: 4 (lower is better)
Translates to: VLSDSSLFTLGRGRMMALYGEGK*YLTAVF
Trigger: AAAGACTGCTGTCAGATAGCACTTGCCTTCCCCATA...CAATGCCATCATTCGGCCTCTACCCAAAGTGAAAAGACTGCTGTCAGATAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506813.1
ENST00000650455.1
CDS-3UTR GCA 90 bp CATGAAACCAGGAGAAAGGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGACGCGGGGAATACTCTTaGCAAAATATAGTACCCGAC +
Preference number: 4 (lower is better)
Translates to: HETRRKAVRVCFNVSAGGRGEYS*QNIVPD
Trigger: GTCGGGTACTATATTTTGGCAAGAGTATTCCCCGCG...TCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTTCTCCTGGTTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp ATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCAACCCAGGCTGGTTGTaGAATAAAGATCCTCAAGAA +
Preference number: 4 (lower is better)
Translates to: ISWRNVDLALAFQRLLSLNPGWL*NKDPQE
Trigger: TTCTTGAGGATCTTTATTGCACAACCAGCCTGGGTT...GAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp TTGTCTCTCGTGAATATTTCAAGTCTGATAGCCAAGGTCGCCTGCCTCATGGTCGAAGAGACACACTGTTaGCATTGTCAAGGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: LSLVNISSLIAKVACLMVEETHC*HCQGFQ
Trigger: CTGGAAACCTTGACAATGGCAACAGTGTGTCTCTTC...GACCATGAGGCAGGCGACCTTGGCTATCAGACTTGAAATATTCACGAGAGACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR GCA 90 bp AACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTACCTGTTCTCCATACTaGAAACTTCGAGTCATTGCC +
Preference number: 4 (lower is better)
Translates to: NVSAGGMWTWHWPFSVYCTCSPY*KLRVIA
Trigger: GGCAATGACTCGAAGTTTGCAGTATGGAGAACAGGT...ACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
CDS-3UTR GCA 90 bp CACAGGCTAGACCAACAGTATCTGCTCGCTTTTTCATTCCATTCATCAGTGGGCACCTGTTCTCCATACTaGAAACTTCGAGTCATTGCC +
Preference number: 4 (lower is better)
Translates to: HRLDQQYLLAFSFHSSVGTCSPY*KLRVIA
Trigger: GGCAATGACTCGAAGTTTGCAGTATGGAGAACAGGT...GCCCACTGATGAATGGAATGAAAAAGCGAGCAGATACTGTTGGTCTAGCCTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR GCA 90 bp CTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAAAAGGCAGTAAGAGTTTaGTTCAACGTATCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: LEECGLGTGLSAFIVSREKAVRV*FNVSAG
Trigger: TCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTT...TTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
CDS-3UTR CCA 90 bp AGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCGTTGCAGGATTAATTTaGTCAAAGCCTCCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: SKSLLQRISWRNVDLALAVAGLI*SKPPGV
Trigger: AACTCCAGGAGGCTTTGACCAAATTAATCCTGCAAC...GGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CCA 90 bp AGGTCGCCTGCCTCATGGTCTACAGGAGGTGGCAGGTTAGACATGACTGATGTACTGACCTTTATGGGTTaGTGTCATTTTTACACAAAC +
Preference number: 4 (lower is better)
Translates to: RSPASWSTGGGRLDMTDVLTFMG*CHFYTN
Trigger: GTTTGTGTAAAAATGACACCAACCCATAAAGGTCAG...TACATCAGTCATGTCTAACCTGCCACCTCCTGTAGACCATGAGGCAGGCGACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CCA 90 bp GCTTTCAGAAGGTTAATGATTGAGGATGCCAGTGAAGGGTGCAGGGACAAAACCACGACATCCCCTTCTTaGGACAGTAATGCTGTTATG +
Preference number: 4 (lower is better)
Translates to: AFRRLMIEDASEGCRDKTTTSPS*DSNAVM
Trigger: CATAACAGCATTACTGTCCCAAGAAGGGGATGTCGT...GGTTTTGTCCCTGCACCCTTCACTGGCATCCTCAATCATTAACCTTCTGAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CCA 90 bp TGGTATAACAAAATAGCAACCTTCTCAACAAGGATAGGGTCAAAGGTCAGCAGTGGGTATGGACTGAAGTaGTCGCCATCCATCCATGCC +
Preference number: 4 (lower is better)
Translates to: WYNKIATFSTRIGSKVSSGYGLK*SPSIHA
Trigger: GGCATGGATGGATGGCGACCACTTCAGTCCATACCC...ACTGCTGACCTTTGACCCTATCCTTGTTGAGAAGGTTGCTATTTTGTTATACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506813.1
ENST00000650455.1
CDS-3UTR CCA 90 bp TTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATGAACAGTTGACAGTATaGAAAGCTAGCTCTGTAGCC +
Preference number: 4 (lower is better)
Translates to: FNVSAGGMWTWHWPFSVYEQLTV*KASSVA
Trigger: GGCTACAGAGCTAGCTTTCCATACTGTCAACTGTTC...ATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CCA 90 bp GGCAAAATGCGTTTCAACAAGTTTGTTGCAGTTGCATTATCAGCTGTCCAGAGTAGGCGACTCAGAGCATaGACACTCAGTTTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: GKMRFNKFVAVALSAVQSRRLRA*TLSLAR
Trigger: CCTTGCCAAACTGAGTGTCCATGCTCTGAGTCGCCT...ACTCTGGACAGCTGATAATGCAACTGCAACAAACTTGTTGAAACGCATTTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CCA 90 bp GCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGTGCAGCAAATGCTTTTaGAACCTCCAGTTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: AVRVCFNVSAGGMWTWHWCSKCF*NLQLES
Trigger: ACTTTCCAACTGGAGGTTCCAAAAGCATTTGCTGCA...CCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CCA 90 bp TGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTCGTAATTCGAACCTTTaGACCTATCAGTTTATCTGC +
Preference number: 4 (lower is better)
Translates to: CFNVSAGGMWTWHWPFSVRNSNL*TYQFIC
Trigger: GCAGATAAACTGATAGGTCCAAAGGTTCGAATTACG...AACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CCA 90 bp TGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATTCTCTAAAGATGCCATaGCTCGAACACACAGCTCAT +
Preference number: 4 (lower is better)
Translates to: WRNVDLALAFQRLLSLVNSLKMP*LEHTAH
Trigger: ATGAGCTGTGTGTTCGAGCCATGGCATCTTTAGAGA...ATTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CCA 90 bp CACAGGCTAGACCAACAGTATCTGCTCGCTTTTTCATTCCATTCATCAGTGGGCTCTCTAAAGATGCCATaGCTCGAACACACAGCTCAT +
Preference number: 4 (lower is better)
Translates to: HRLDQQYLLAFSFHSSVGSLKMP*LEHTAH
Trigger: ATGAGCTGTGTGTTCGAGCCATGGCATCTTTAGAGA...GCCCACTGATGAATGGAATGAAAAAGCGAGCAGATACTGTTGGTCTAGCCTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CCA 90 bp CAGCGTTTATTGTCTCTCGTGAATATTTCAAGTCTGATAGCCAAGGTCGCCTGCTCATCAGTGGGCCAATaGTCTCTAAAGATGCCATGG +
Preference number: 4 (lower is better)
Translates to: QRLLSLVNISSLIAKVACSSVGQ*SLKMPW
Trigger: CCATGGCATCTTTAGAGACCATTGGCCCACTGATGA...GCAGGCGACCTTGGCTATCAGACTTGAAATATTCACGAGAGACAATAAACGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR CAA 72 bp ACCTCTAGTCCATTCTCTCTTCTGAGCTCTTCAGCATaGAGGGCTGAACAGTTGACAGTATGGAAAGCTAGC +
Preference number: 4 (lower is better)
Translates to: TSSPFSLLSSSA*RAEQLTVWKAS
Trigger: GCTAGCTTTCCATACTGTCAACTGTTCAGCCCTCAATGCTGAAGAGCTCAGAAGAGAGAATGGACTAGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR TCA 90 bp GCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGGGAATCTCTCTCTGTTaGAGAATATTTCCGTACTTG +
Preference number: 4 (lower is better)
Translates to: AVRVCFNVSAGGMWTWHWGISLC*RIFPYL
Trigger: CAAGTACGGAAATATTCTTCAACAGAGAGAGATTCC...CCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp CGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTAAGCATCCTTTGATCTaGGCTTATTGTAAACATCGC +
Preference number: 4 (lower is better)
Translates to: RISWRNVDLALAFQRLLSKHPLI*AYCKHR
Trigger: GCGATGTTTACAATAAGCTCAGATCAAAGGATGCTT...AGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp ACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTGTTTACTTTTGGGGTaGGCAAGAAGCGATGATAAA +
Preference number: 4 (lower is better)
Translates to: TYQLEECGLGTGLSAFIVCLLLG*ARSDDK
Trigger: TTTATCATCGCTTCTTGCTCACCCCAAAAGTAAACA...GACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp CATGAAACCAGGAGAAAGGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAAATTCTTGCATCTCATaGAATCCATACGGGCCACTC +
Preference number: 4 (lower is better)
Translates to: HETRRKAVRVCFNVSAGGNSCIS*NPYGPL
Trigger: GAGTGGCCCGTATGGATTTCATGAGATGCAAGAATT...TCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTTCTCCTGGTTTCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp ACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCATGATGGCATTGTCTTaGTCCCTGCTTGGAAAATAT +
Preference number: 4 (lower is better)
Translates to: TYQLEECGLGTGLSAFIVMMALS*SLLGKY
Trigger: ATATTTTCCAAGCAGGGATCAAGACAATGCCATCAT...GACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260818.11
CDS-3UTR TCA 90 bp TGGTATAACAAAATAGCAACCTTCTCAACAAGGATAGGGTCAAAGGTCAGCAGTTGGGTAGAGGCCGAATaGTGGCATTGTCTTGATCCC +
Preference number: 4 (lower is better)
Translates to: WYNKIATFSTRIGSKVSSWVEAE*WHCLDP
Trigger: GGGATCAAGACAATGCCATCATTCGGCCTCTACCCA...ACTGCTGACCTTTGACCCTATCCTTGTTGAGAAGGTTGCTATTTTGTTATACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506813.1
CDS-3UTR TCA 90 bp CATGAAACCAGGAGAAAGGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGACACAAAATTCCAGCCTaGAATAGGTGTGTCTGTAGC +
Preference number: 4 (lower is better)
Translates to: HETRRKAVRVCFNVSAGGHKIPA*NRCVCS
Trigger: GCTACAGACACACCTATTTCAGGCTGGAATTTTGTG...TCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTTCTCCTGGTTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp AACCAGGAGAAAGGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGCACAAAATTCCAGCCTaGAATAGGTGTGTCTGTAGC +
Preference number: 4 (lower is better)
Translates to: NQEKGSKSLLQRISWRNVHKIPA*NRCVCS
Trigger: GCTACAGACACACCTATTTCAGGCTGGAATTTTGTG...CACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTTCTCCTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp TTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTACTGGACAAAACCATTaGTTCAGCAATATTGTTGAC +
Preference number: 4 (lower is better)
Translates to: LLQRISWRNVDLALAFQRTGQNH*FSNIVD
Trigger: GTCAACAATATTGCTGAATCAATGGTTTTGTCCAGT...ACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp CTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAAATGGCATTGTTCCTATaGTTCATTGCCTGGATAACT +
Preference number: 4 (lower is better)
Translates to: LEECGLGTGLSAFIVSREMALFL*FIAWIT
Trigger: AGTTATCCAGGCAATGAATCATAGGAACAATGCCAT...TTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp CTATCTGACAGCAGTCTTTTCACTTTGGGTAGAGGCCGAATGATGGCATTGTCTGGAATAACACTGTCATaGAACCAGGAGAAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: LSDSSLFTLGRGRMMALSGITLS*NQEKGS
Trigger: ACTGCCTTTCTCCTGGTTTCATGACAGTGTTATTCC...AGACAATGCCATCATTCGGCCTCTACCCAAAGTGAAAAGACTGCTGTCAGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR TCA 90 bp TGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATTGTACCCACTTATGTTaGTCCACAGAGTGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: WRNVDLALAFQRLLSLVNCTHLC*STECFL
Trigger: AAGAAAGCACTCTGTGGATCAACATAAGTGGGTACA...ATTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
CDS-3UTR GCA 90 bp TTGTCTCTCGTGAATATTTCAAGTCTGATAGCCAAGGTCGCCTGCCTCATGGTCATTATGTTCATTTTGTaGTCAAACCTTCGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: LSLVNISSLIAKVACLMVIMFIL*SNLRGR
Trigger: CCTCCCGCGAAGGTTTGAGCACAAAATGAACATAAT...GACCATGAGGCAGGCGACCTTGGCTATCAGACTTGAAATATTCACGAGAGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR GCA 90 bp AACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTGTTGCTTCTTTTGAGTaGTTTTACTACCTTCACCCC +
Preference number: 4 (lower is better)
Translates to: NVSAGGMWTWHWPFSVYCVASFE*FYYLHP
Trigger: GGGGTGAAGGTAGTAAAAGCACTCAAAAGAAGCAAC...ACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp TGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATAGCATATCAAACTGCTaGCCTTCAGTTGTCTCACTA +
Preference number: 4 (lower is better)
Translates to: WRNVDLALAFQRLLSLVNSISNC*PSVVSL
Trigger: TAGTGAGACAACTGAAGGGCAGCAGTTTGATATGCT...ATTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp CTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAACTTAGGGCAAGCTCCTaGATTTTTGTAGCAATTTCT +
Preference number: 4 (lower is better)
Translates to: LEECGLGTGLSAFIVSRELRASS*IFVAIS
Trigger: AGAAATTGCTACAAAAATGCAGGAGCTTGCCCTAAG...TTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp AGGTCGCCTGCCTCATGGTCTACAGGAGGTGGCAGGTTAGACATGACTGATGTATTTCAACAAGTTTGTTaGAGTTGCATTATCAGCTGT +
Preference number: 4 (lower is better)
Translates to: RSPASWSTGGGRLDMTDVFQQVC*SCIISC
Trigger: ACAGCTGATAATGCAACTGCAACAAACTTGTTGAAA...TACATCAGTCATGTCTAACCTGCCACCTCCTGTAGACCATGAGGCAGGCGACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR GCA 90 bp GCTTTCAGAAGGTTAATGATTGAGGATGCCAGTGAAGGGTGCAGGGACAAAACCACATTGTCTCTAACATaGATCCGATCAGCATCCTTC +
Preference number: 4 (lower is better)
Translates to: AFRRLMIEDASEGCRDKTTLSLT*IRSASF
Trigger: GAAGGATGCTGATCGGATGCATGTTAGAGACAATGT...GGTTTTGTCCCTGCACCCTTCACTGGCATCCTCAATCATTAACCTTCTGAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp TTCTTGCATCTCATGAAATCCATACGGGCCACTCCTTTCTTTGTCTGCGTTGCCACATTGTCTCTAACATaGATCCGATCAGCATCCTTC +
Preference number: 4 (lower is better)
Translates to: FLHLMKSIRATPFFVCVATLSLT*IRSASF
Trigger: GAAGGATGCTGATCGGATGCATGTTAGAGACAATGT...GGCAACGCAGACAAAGAAAGGAGTGGCCCGTATGGATTTCATGAGATGCAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR GCA 90 bp TTCAGCCAAATACCCTCCAAGGCGACTCAGAGCATGGACACTCAGTTTGGCAAGGCAATACTGATAAAGTaGTCTTGTGTTACTCTGAAG +
Preference number: 4 (lower is better)
Translates to: FSQIPSKATQSMDTQFGKAILIK*SCVTLK
Trigger: CTTCAGAGTAACACAAGAGCACTTTATCAGTATTGC...CTTGCCAAACTGAGTGTCCATGCTCTGAGTCGCCTTGGAGGGTATTTGGCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR GCA 90 bp TTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTATAATCCAAGAGACTTaGAGCAAATGCTTTTGGAAC +
Preference number: 4 (lower is better)
Translates to: LLQRISWRNVDLALAFQRIIQET*SKCFWN
Trigger: GTTCCAAAAGCATTTGCTGCAAGTCTCTTGGATTAT...ACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp GGCAAAATGCGTTTCAACAAGTTTGTTGCAGTTGCATTATCAGCTGTCCAGAGTATGGCCATGAATGTGTaGAAGTATTGGGCCTGCGAG +
Preference number: 4 (lower is better)
Translates to: GKMRFNKFVAVALSAVQSMAMNV*KYWACE
Trigger: CTCGCAGGCCCAATACTTGCACACATTCATGGCCAT...ACTCTGGACAGCTGATAATGCAACTGCAACAAACTTGTTGAAACGCATTTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR GCA 90 bp AGGTCGCCTGCCTCATGGTCTACAGGAGGTGGCAGGTTAGACATGACTGATGTAAGCACCCTTTGCCATTaGTTCTTTGATTATTTTTGT +
Preference number: 4 (lower is better)
Translates to: RSPASWSTGGGRLDMTDVSTLCH*FFDYFC
Trigger: ACAAAAATAATCAAAGAAGCAATGGCAAAGGGTGCT...TACATCAGTCATGTCTAACCTGCCACCTCCTGTAGACCATGAGGCAGGCGACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR GCA 90 bp ACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCGTTCCTATGATTCATTaGCTGGATAACTTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: TYQLEECGLGTGLSAFIVVPMIH*LDNFGK
Trigger: CTTCCCAAAGTTATCCAGGCAATGAATCATAGGAAC...GACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp TTCTTGCATCTCATGAAATCCATACGGGCCACTCCTTTCTTTGTCTGCGTTGCCAAGGCAGTAAGAGTTTaGTTCAACGTATCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: FLHLMKSIRATPFFVCVAKAVRV*FNVSAG
Trigger: TCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTT...GGCAACGCAGACAAAGAAAGGAGTGGCCCGTATGGATTTCATGAGATGCAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CCA 90 bp GGCAAAATGCGTTTCAACAAGTTTGTTGCAGTTGCATTATCAGCTGTCCAGAGTACGCTCGCGAAACTTTaGAAGCTGAGTGAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: GKMRFNKFVAVALSAVQSTLAKL*KLSESQ
Trigger: CTGGCTTTCACTCAGCTTCCAAAGTTTCGCGAGCGT...ACTCTGGACAGCTGATAATGCAACTGCAACAAACTTGTTGAAACGCATTTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CCA 90 bp TGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTCTTTCGAAGAACCACTaGCTTCTGATTTATATTCTC +
Preference number: 4 (lower is better)
Translates to: CFNVSAGGMWTWHWPFSVLSKNH*LLIYIL
Trigger: GAGAATATAAATCAGAAGCCAGTGGTTCTTCGAAAG...AACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CCA 90 bp CATGAAACCAGGAGAAAGGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGATACATTGCTTTGCAGTaGTACTGTAGCTCGGCTTAC +
Preference number: 4 (lower is better)
Translates to: HETRRKAVRVCFNVSAGGYIALQ*YCSSAY
Trigger: GTAAGCCGAGCTACAGTACCACTGCAAAGCAATGTA...TCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTTCTCCTGGTTTCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CCA 90 bp CTATCTGACAGCAGTCTTTTCACTTTGGGTAGAGGCCGAATGATGGCATTGTCTTACATTGCTTTGCAGTaGTACTGTAGCTCGGCTTAC +
Preference number: 4 (lower is better)
Translates to: LSDSSLFTLGRGRMMALSYIALQ*YCSSAY
Trigger: GTAAGCCGAGCTACAGTACCACTGCAAAGCAATGTA...AGACAATGCCATCATTCGGCCTCTACCCAAAGTGAAAAGACTGCTGTCAGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506813.1
ENST00000650455.1
CDS-3UTR CCA 90 bp GCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGTTTAATTGGCCAATCTaGAAACCGGAGTGTATCACA +
Preference number: 4 (lower is better)
Translates to: AVRVCFNVSAGGMWTWHWFNWPI*KPECIT
Trigger: TGTGATACACTCCGGTTTCCAGATTGGCCAATTAAA...CCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CCA 90 bp CAGCGTTTATTGTCTCTCGTGAATATTTCAAGTCTGATAGCCAAGGTCGCCTGCATGTGGACTTGGCACTaGCCTTTCAGCGTTTATTGT +
Preference number: 4 (lower is better)
Translates to: QRLLSLVNISSLIAKVACMWTWH*PFSVYC
Trigger: ACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACAT...GCAGGCGACCTTGGCTATCAGACTTGAAATATTCACGAGAGACAATAAACGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509279.1
ENST00000650455.1
3UTR CAA 72 bp CTGGCGGCAAAATGCGTTTCAACAAGTTTGTTGCAGTaGCATTATCAGCTGTCCAGAGTCCCACTAAATGTC +
Preference number: 4 (lower is better)
Translates to: LAAKCVSTSLLQ*HYQLSRVPLNV
Trigger: GACATTTAGTGGGACTCTGGACAGCTGATAATGCAACTGCAACAAACTTGTTGAAACGCATTTTGCCGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
3UTR CAA 72 bp AGTATTGGGCCTGCGAGCCTATATAATCCAAGAGACTaGCAGCAAATGCTTTTGGAACCTCCAGTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: SIGPASLYNPRD*QQMLLEPPVGK
Trigger: CTTTCCAACTGGAGGTTCCAAAAGCATTTGCTGCAAGTCTCTTGGATTATATAGGCTCGCAGGCCCAATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR TCA 90 bp GCTTTCAGAAGGTTAATGATTGAGGATGCCAGTGAAGGGTGCAGGGACAAAACCATACTTCCCCCTCCATaGATGTTTTGTTGTGTAGAA +
Preference number: 4 (lower is better)
Translates to: AFRRLMIEDASEGCRDKTILPPP*MFCCVE
Trigger: TTCTACACAACAAAACATTCATGGAGGGGGAAGTAT...GGTTTTGTCCCTGCACCCTTCACTGGCATCCTCAATCATTAACCTTCTGAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp AACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTAATTACAGGTTTTCTTaGGTCACTCCAGTGATGCTT +
Preference number: 4 (lower is better)
Translates to: NVSAGGMWTWHWPFSVYCNYRFS*VTPVML
Trigger: AAGCATCACTGGAGTGACTCAAGAAAACCTGTAATT...ACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp AACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTTCCTCCTTGATAATCTaGGAGATCTACAAATCCTTC +
Preference number: 4 (lower is better)
Translates to: NVSAGGMWTWHWPFSVYCSSLII*EIYKSF
Trigger: GAAGGATTTGTAGATCTCTCAGATTATCAAGGAGGA...ACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp ACCAGGAGAAAGGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGGGAATCTCTCTCTGTTaGAGAATATTTCCGTACTTG +
Preference number: 4 (lower is better)
Translates to: TRRKAVRVCFNVSAGGMWGISLC*RIFPYL
Trigger: CAAGTACGGAAATATTCTTCAACAGAGAGAGATTCC...CCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTTCTCCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp TGGTATAACAAAATAGCAACCTTCTCAACAAGGATAGGGTCAAAGGTCAGCAGTCTCACAGCCTGGAACTaGCTCTCAAGTTCCGCATTT +
Preference number: 4 (lower is better)
Translates to: WYNKIATFSTRIGSKVSSLTAWN*LSSSAF
Trigger: AAATGCGGAACTTGAGAGTCAGTTCCAGGCTGTGAG...ACTGCTGACCTTTGACCCTATCCTTGTTGAGAAGGTTGCTATTTTGTTATACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR TCA 90 bp TTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATCGTTGTTGCTTCTTTTaGGTGCTTTTACTACCTTCA +
Preference number: 4 (lower is better)
Translates to: FNVSAGGMWTWHWPFSVYRCCFF*VLLLPS
Trigger: TGAAGGTAGTAAAAGCACTCAAAAGAAGCAACAACG...ATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp GTGCTATCTGACAGCAGTCTTTTCACTTTGGGTAGAGGCCGAATGATGGCATTGGCCATGGAAGGATGCTaGAAAAGTTTAAAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: VLSDSSLFTLGRGRMMALAMEGC*KSLKRV
Trigger: AACCCTTTTTAAACTTTTTCAGCATCCTTCCATGGC...CAATGCCATCATTCGGCCTCTACCCAAAGTGAAAAGACTGCTGTCAGATAGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR TCA 90 bp TGGTATAACAAAATAGCAACCTTCTCAACAAGGATAGGGTCAAAGGTCAGCAGTCTCAGGTACGAGATCTaGGCTTTCCAAGTATGCCAG +
Preference number: 4 (lower is better)
Translates to: WYNKIATFSTRIGSKVSSLRYEI*AFQVCQ
Trigger: CTGGCATACTTGGAAAGCTCAGATCTCGTACCTGAG...ACTGCTGACCTTTGACCCTATCCTTGTTGAGAAGGTTGCTATTTTGTTATACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR TCA 90 bp GGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGTTTATATTCTCTTTTTaGGCAATGCCCATCCTATCC +
Preference number: 4 (lower is better)
Translates to: GSKSLLQRISWRNVDLALFIFSF*AMPILS
Trigger: GGATAGGATGGGCATTGCTCAAAAAGAGAATATAAA...CAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp TGGATAGTTGATTATAGGAATGGGGCAATACTGATAAAGTGCTCTTGTGTTACTTCTGAAGACGAGGTGTaGAATCCGCGAGATGGGCAG +
Preference number: 4 (lower is better)
Translates to: WIVDYRNGAILIKCSCVTSEDEV*NPRDGQ
Trigger: CTGCCCATCTCGCGGATTTCACACCTCGTCTTCAGA...AGTAACACAAGAGCACTTTATCAGTATTGCCCCATTCCTATAATCAACTATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR TCA 90 bp GGCAAAATGCGTTTCAACAAGTTTGTTGCAGTTGCATTATCAGCTGTCCAGAGTGCTCTTGTGTTACTCTaGAGACGAGGTGTGAAATCC +
Preference number: 4 (lower is better)
Translates to: GKMRFNKFVAVALSAVQSALVLL*RRGVKS
Trigger: GGATTTCACACCTCGTCTTCAGAGTAACACAAGAGC...ACTCTGGACAGCTGATAATGCAACTGCAACAAACTTGTTGAAACGCATTTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR TCA 90 bp TTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTAAATCTTCTTTATaGCGGTTGAAGAGGATGCTC +
Preference number: 4 (lower is better)
Translates to: FNVSAGGMWTWHWPFSVYCKSSL*RLKRML
Trigger: GAGCATCCTCTTCAACCGTCATAAAGAAGATTTACA...ATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp GGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGAAAAGGAGGTCATCTaGAGTTTCCATTGTTATAGT +
Preference number: 4 (lower is better)
Translates to: GSKSLLQRISWRNVDLALEKEVI*SFHCYS
Trigger: ACTATAACAATGGAAACTTCAGATGACCTCCTTTTC...CAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp GCTTTCAGAAGGTTAATGATTGAGGATGCCAGTGAAGGGTGCAGGGACAAAACCGTTTCTTCACTTTTCTaGATGCCACTCTCTTCTAGT +
Preference number: 4 (lower is better)
Translates to: AFRRLMIEDASEGCRDKTVSSLF*MPLSSS
Trigger: ACTAGAAGAGAGTGGCATTCAGAAAAGTGAAGAAAC...GGTTTTGTCCCTGCACCCTTCACTGGCATCCTCAATCATTAACCTTCTGAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp AACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTGGATTGTATTTTATaGCATTTCTCAGAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: NVSAGGMWTWHWPFSVYCLDCIL*HFSEPP
Trigger: TGGAGGCTCTGAGAAATGTCATAAAATACAATCCAG...ACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp CGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTACTGGACAAAACCATTaGTTCAGCAATATTGTTGAC +
Preference number: 4 (lower is better)
Translates to: RISWRNVDLALAFQRLLSTGQNH*FSNIVD
Trigger: GTCAACAATATTGCTGAATCAATGGTTTTGTCCAGT...AGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp TGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATAACAAATCATGTTTCTaGTCTTTGAAGGCACTCCAG +
Preference number: 4 (lower is better)
Translates to: WRNVDLALAFQRLLSLVNNKSCF*SLKALQ
Trigger: CTGGAGTGCCTTCAAAGATCAGAAACATGATTTGTT...ATTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
CDS-3UTR TCA 90 bp GAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATATTGTACCCACTTATGTTaGTCCACAGAGTGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: EECGLGTGLSAFIVSREYCTHLC*STECFL
Trigger: AAGAAAGCACTCTGTGGATCAACATAAGTGGGTACA...ATATTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
CDS-3UTR GCA 90 bp CTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATGTTGTGTAGAAACATaGCAGATCCTTATTTTCCCT +
Preference number: 4 (lower is better)
Translates to: LEECGLGTGLSAFIVSRECCVET*QILIFP
Trigger: AGGGAAAATAAGGATCTGGCATGTTTCTACACAACA...TTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp TTCCATTGTTATAGTCCGAATAAGCATGGGGTATCCTGCATATTTATAAGGCTGGAAACCAGCTTTGGATaGCACAAGCCTCCTCACAGC +
Preference number: 4 (lower is better)
Translates to: FHCYSPNKHGVSCIFIRLETSFG*HKPPHS
Trigger: GCTGTGAGGAGGCTTGTGGCATCCAAAGCTGGTTTC...CAGCCTTATAAATATGCAGGATACCCCATGCTTATTCGGACTATAACAATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR GCA 90 bp GAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATATGTTGCTTCTTTTGAGTaGTTTTACTACCTTCACCCC +
Preference number: 4 (lower is better)
Translates to: EECGLGTGLSAFIVSREYVASFE*FYYLHP
Trigger: GGGGTGAAGGTAGTAAAAGCACTCAAAAGAAGCAAC...ATATTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp AGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCAAGCATATCAACTGCTaGATGGATTATTCCGTTGTT +
Preference number: 4 (lower is better)
Translates to: SKSLLQRISWRNVDLALAKHINC*MDYSVV
Trigger: AACAACGGAATAATCCATGCAGCAGTTGATATGCTT...GGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp AACCAGGAGAAAGGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGAGCATATCAAACTGCTaGCCTTCAGTTGTCTCACTA +
Preference number: 4 (lower is better)
Translates to: NQEKGSKSLLQRISWRNVSISNC*PSVVSL
Trigger: TAGTGAGACAACTGAAGGGCAGCAGTTTGATATGCT...CACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTTCTCCTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp GAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATATAAGAGCATATCAAACTaGTGCCCTTCAGTTGTCTCA +
Preference number: 4 (lower is better)
Translates to: EECGLGTGLSAFIVSREYKSISN*CPSVVS
Trigger: TGAGACAACTGAAGGGCAGCAGTTTGATATGCTCTT...ATATTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp CATCTCATGAAATCCATACGGGCCACTCCTTTCTTTGTCTGCGTTGCCAAAATAGGTTCTTCCATTGGATaGTACCATCTCCAAGAGCAT +
Preference number: 4 (lower is better)
Translates to: HLMKSIRATPFFVCVAKIGSSIG*YHLQEH
Trigger: ATGCTCTTGGAGATGGTAGCATCCAATGGAAGAACC...TATTTTGGCAACGCAGACAAAGAAAGGAGTGGCCCGTATGGATTTCATGAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR GCA 90 bp TGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATCTTAGGGCAAGCTCCTaGATTTTTGTAGCAATTTCT +
Preference number: 4 (lower is better)
Translates to: WRNVDLALAFQRLLSLVNLRASS*IFVAIS
Trigger: AGAAATTGCTACAAAAATGCAGGAGCTTGCCCTAAG...ATTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp ACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCATAATCCAAGAGACTTaGAGCAAATGCTTTTGGAAC +
Preference number: 4 (lower is better)
Translates to: TYQLEECGLGTGLSAFIVIIQET*SKCFWN
Trigger: GTTCCAAAAGCATTTGCTGCAAGTCTCTTGGATTAT...GACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp AGTGACTTAGCCCAATTTTTGTTGACTGTAGCTCAACCCTACAGTCATGCTAGTAAGCGATCTCCATGTTaGTCTGACTCCACTTTTGCC +
Preference number: 4 (lower is better)
Translates to: SDLAQFLLTVAQPYSHASKRSPC*SDSTFA
Trigger: GGCAAAAGTGGAGTCAGAGCAACATGGAGATCGCTT...ACTAGCATGACTGTAGGGTTGAGCTACAGTCAACAAAAATTGGGCTAAGTCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp AACCAGGAGAAAGGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGAACCCAGGCTGGTTGTaGAATAAAGATCCTCAAGAA +
Preference number: 4 (lower is better)
Translates to: NQEKGSKSLLQRISWRNVNPGWL*NKDPQE
Trigger: TTCTTGAGGATCTTTATTGCACAACCAGCCTGGGTT...CACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTTCTCCTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp CTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAAGGTTTTCAAGGCCAATaGCTTCGAGTAATTTTAAGA +
Preference number: 4 (lower is better)
Translates to: LEECGLGTGLSAFIVSREGFQGQ*LRVILR
Trigger: TCTTAAAATTACTCGAAGGCATTGGCCTTGAAAACC...TTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
CDS-3UTR GCA 90 bp TGCATCCGATCAGCATCCTTCTCAGGTACGAGATCTGAGCTTTCCAAGTATGCCACGTTGAGAAAGGTTTaGTGCTTTATCTCAGCTATT +
Preference number: 4 (lower is better)
Translates to: CIRSASFSGTRSELSKYATLRKV*CFISAI
Trigger: AATAGCTGAGATAAAGCAGCAAACCTTTCTCAACGT...GGCATACTTGGAAAGCTCAGATCTCGTACCTGAGAAGGATGCTGATCGGATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CCA 90 bp TTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTTGGTCAAAGCCTCCTaGAGTTACTTCCAAAATTAC +
Preference number: 4 (lower is better)
Translates to: FNVSAGGMWTWHWPFSVYLVKAS*SYFQNY
Trigger: GTAATTTTGGAAGTAACTCCAGGAGGCTTTGACCAA...ATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CCA 90 bp CGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTGACCTTTATGGGTTaGTGTCATTTTTACACAAAC +
Preference number: 4 (lower is better)
Translates to: RISWRNVDLALAFQRLLSLTFMG*CHFYTN
Trigger: GTTTGTGTAAAAATGACACCAACCCATAAAGGTCAG...AGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CCA 90 bp CATGAAACCAGGAGAAAGGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGATTAACCTCAAACTCATaGTGGTTCCAGGAGATCACA +
Preference number: 4 (lower is better)
Translates to: HETRRKAVRVCFNVSAGGLTSNS*WFQEIT
Trigger: TGTGATCTCCTGGAACCACCATGAGTTTGAGGTTAA...TCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTTCTCCTGGTTTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CCA 90 bp CATGAAACCAGGAGAAAGGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGACTTCATGTTTACTTTTaGGGTGAGCAAGAAGCGATG +
Preference number: 4 (lower is better)
Translates to: HETRRKAVRVCFNVSAGGLHVYF*GEQEAM
Trigger: CATCGCTTCTTGCTCACCCCAAAAGTAAACATGAAG...TCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTTCTCCTGGTTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CCA 90 bp CTATCTGACAGCAGTCTTTTCACTTTGGGTAGAGGCCGAATGATGGCATTGTCTCTTCATGTTTACTTTTaGGGTGAGCAAGAAGCGATG +
Preference number: 4 (lower is better)
Translates to: LSDSSLFTLGRGRMMALSLHVYF*GEQEAM
Trigger: CATCGCTTCTTGCTCACCCCAAAAGTAAACATGAAG...AGACAATGCCATCATTCGGCCTCTACCCAAAGTGAAAAGACTGCTGTCAGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CCA 90 bp GGCAAAATGCGTTTCAACAAGTTTGTTGCAGTTGCATTATCAGCTGTCCAGAGTGTGAAATCCGCGAGATaGGCAGCAATCTTCTCTATC +
Preference number: 4 (lower is better)
Translates to: GKMRFNKFVAVALSAVQSVKSAR*AAIFSI
Trigger: GATAGAGAAGATTGCTGCCCATCTCGCGGATTTCAC...ACTCTGGACAGCTGATAATGCAACTGCAACAAACTTGTTGAAACGCATTTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CCA 90 bp GTGCTATCTGACAGCAGTCTTTTCACTTTGGGTAGAGGCCGAATGATGGCATTGTTTAATTGGCCAATCTaGAAACCGGAGTGTATCACA +
Preference number: 4 (lower is better)
Translates to: VLSDSSLFTLGRGRMMALFNWPI*KPECIT
Trigger: TGTGATACACTCCGGTTTCCAGATTGGCCAATTAAA...CAATGCCATCATTCGGCCTCTACCCAAAGTGAAAAGACTGCTGTCAGATAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CCA 90 bp CTTTCAGCGTTTATTGTCTCTCGTGAATATTTCAAGTCTGATAGCCAAGGTCGCAACCGGGTCTTTAATTaGCCAATCTGGAAACCGGAG +
Preference number: 4 (lower is better)
Translates to: LSAFIVSREYFKSDSQGRNRVFN*PIWKPE
Trigger: CTCCGGTTTCCAGATTGGCCAATTAAAGACCCGGTT...GCGACCTTGGCTATCAGACTTGAAATATTCACGAGAGACAATAAACGCTGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CCA 90 bp CATGAAACCAGGAGAAAGGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAGGATTCTTATCAGGGTaGTACTTTTGTGCAAGTCTG +
Preference number: 4 (lower is better)
Translates to: HETRRKAVRVCFNVSAGGGFLSG*YFCASL
Trigger: CAGACTTGCACAAAAGTACCACCCTGATAAGAATCC...TCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTTCTCCTGGTTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
3UTR CAA 72 bp AGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATaGTCTCTCGTGAATATTTCAAGTCTGATAGCCAAG +
Preference number: 4 (lower is better)
Translates to: RNVDLALAFQRL*SLVNISSLIAK
Trigger: CTTGGCTATCAGACTTGAAATATTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509279.1
ENST00000650455.1
CDS-3UTR TCA 90 bp TGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATTATGTAGTAATCGCATaGGTTCCAACTGAAAAGACA +
Preference number: 4 (lower is better)
Translates to: WRNVDLALAFQRLLSLVNYVVIA*VPTEKT
Trigger: TGTCTTTTCAGTTGGAACTCATGCGATTACTACATA...ATTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp CAGCGTTTATTGTCTCTCGTGAATATTTCAAGTCTGATAGCCAAGGTCGCCTGCAATTACAGGTTTTCTTaGGTCACTCCAGTGATGCTT +
Preference number: 4 (lower is better)
Translates to: QRLLSLVNISSLIAKVACNYRFS*VTPVML
Trigger: AAGCATCACTGGAGTGACTCAAGAAAACCTGTAATT...GCAGGCGACCTTGGCTATCAGACTTGAAATATTCACGAGAGACAATAAACGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR TCA 90 bp CAGCGTTTATTGTCTCTCGTGAATATTTCAAGTCTGATAGCCAAGGTCGCCTGCTCCTCCTTGATAATCTaGGAGATCTACAAATCCTTC +
Preference number: 4 (lower is better)
Translates to: QRLLSLVNISSLIAKVACSSLII*EIYKSF
Trigger: GAAGGATTTGTAGATCTCTCAGATTATCAAGGAGGA...GCAGGCGACCTTGGCTATCAGACTTGAAATATTCACGAGAGACAATAAACGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR TCA 90 bp TGGATAGTTGATTATAGGAATGGGGCAATACTGATAAAGTGCTCTTGTGTTACTAGTAACCCCCATCGCTaGCCTTTATGGGTTGGTGTC +
Preference number: 4 (lower is better)
Translates to: WIVDYRNGAILIKCSCVTSNPHR*PLWVGV
Trigger: GACACCAACCCATAAAGGTCAGCGATGGGGGTTACT...AGTAACACAAGAGCACTTTATCAGTATTGCCCCATTCCTATAATCAACTATCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR TCA 90 bp GAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATATGCCATGGAAGGATGCTaGAAAAGTTTAAAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: EECGLGTGLSAFIVSREYAMEGC*KSLKRV
Trigger: AACCCTTTTTAAACTTTTTCAGCATCCTTCCATGGC...ATATTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp CTATCTGACAGCAGTCTTTTCACTTTGGGTAGAGGCCGAATGATGGCATTGTCTAAGCATCCTTTGATCTaGGCTTATTGTAAACATCGC +
Preference number: 4 (lower is better)
Translates to: LSDSSLFTLGRGRMMALSKHPLI*AYCKHR
Trigger: GCGATGTTTACAATAAGCTCAGATCAAAGGATGCTT...AGACAATGCCATCATTCGGCCTCTACCCAAAGTGAAAAGACTGCTGTCAGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR TCA 90 bp TTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTTTATATTCTCTTTTTaGGCAATGCCCATCCTATCC +
Preference number: 4 (lower is better)
Translates to: FNVSAGGMWTWHWPFSVYFIFSF*AMPILS
Trigger: GGATAGGATGGGCATTGCTCAAAAAGAGAATATAAA...ATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp TCTTTTAGAAGCTTAACCGGGTCTTTAATTGGCCAATCTGGAAACCGGAGTGTAATTCCAAATAAGGTTTaGCCTGGCATGGTCTTGACC +
Preference number: 4 (lower is better)
Translates to: SFRSLTGSLIGQSGNRSVIPNKV*PGMVLT
Trigger: GGTCAAGACCATGCCAGGTCAAACCTTATTTGGAAT...TACACTCCGGTTTCCAGATTGGCCAATTAAAGACCCGGTTAAGCTTCTAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR TCA 90 bp ACCAGGAGAAAGGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGATAAGCATCATCTATTaGCATCATAGGTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: TRRKAVRVCFNVSAGGMWISIIY*HHRWLL
Trigger: AAGAAGCCACCTATGATGTCAATAGATGATGCTTAT...CCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTTCTCCTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp TTGTCTCTCGTGAATATTTCAAGTCTGATAGCCAAGGTCGCCTGCCTCATGGTCATAAGCATCATCTATTaGCATCATAGGTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: LSLVNISSLIAKVACLMVISIIY*HHRWLL
Trigger: AAGAAGCCACCTATGATGTCAATAGATGATGCTTAT...GACCATGAGGCAGGCGACCTTGGCTATCAGACTTGAAATATTCACGAGAGACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR TCA 90 bp GGCAAAATGCGTTTCAACAAGTTTGTTGCAGTTGCATTATCAGCTGTCCAGAGTTCAGGGTTGTCCTGCTaGTTTTTAAAGTGCTCTAGC +
Preference number: 4 (lower is better)
Translates to: GKMRFNKFVAVALSAVQSSGLSC*FLKCSS
Trigger: GCTAGAGCACTTTAAAAATCAGCAGGACAACCCTGA...ACTCTGGACAGCTGATAATGCAACTGCAACAAACTTGTTGAAACGCATTTTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR TCA 90 bp CATGAAACCAGGAGAAAGGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGGCATTGTTCCTATaGTTCATTGCCTGGATAACT +
Preference number: 4 (lower is better)
Translates to: HETRRKAVRVCFNVSAGGMALFL*FIAWIT
Trigger: AGTTATCCAGGCAATGAATCATAGGAACAATGCCAT...TCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTTCTCCTGGTTTCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp CATGAAACCAGGAGAAAGGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAGTATCCTGCTGTTTGTaGCTCAGAAATGAACAAATC +
Preference number: 4 (lower is better)
Translates to: HETRRKAVRVCFNVSAGGVSCCL*LRNEQI
Trigger: GATTTGTTCATTTCTGAGTCACAAACAGCAGGATAC...TCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTTCTCCTGGTTTCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
CDS-3UTR TCA 90 bp CAGCGTTTATTGTCTCTCGTGAATATTTCAAGTCTGATAGCCAAGGTCGCCTGCGTATCCTGCTGTTTGTaGCTCAGAAATGAACAAATC +
Preference number: 4 (lower is better)
Translates to: QRLLSLVNISSLIAKVACVSCCL*LRNEQI
Trigger: GATTTGTTCATTTCTGAGTCACAAACAGCAGGATAC...GCAGGCGACCTTGGCTATCAGACTTGAAATATTCACGAGAGACAATAAACGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509279.1
ENST00000650455.1
CDS-3UTR GCA 90 bp AACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTACAAAGCATATCAACTaGTGCATGGATTATTCCGTT +
Preference number: 4 (lower is better)
Translates to: NVSAGGMWTWHWPFSVYCTKHIN*CMDYSV
Trigger: AACGGAATAATCCATGCAGCAGTTGATATGCTTTGT...ACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp AGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAACAAGTTTGTTaGAGTTGCATTATCAGCTGT +
Preference number: 4 (lower is better)
Translates to: SKSLLQRISWRNVDLALAFQQVC*SCIISC
Trigger: ACAGCTGATAATGCAACTGCAACAAACTTGTTGAAA...GGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp ACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTTTCTTTGTCTGCGTTaGCAAAATACCATTCCTTTT +
Preference number: 4 (lower is better)
Translates to: TYQLEECGLGTGLSAFIVFLCLR*QNTIPF
Trigger: AAAAGGAATGGTATTTTGGCAACGCAGACAAAGAAA...GACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp AGTGACTTAGCCCAATTTTTGTTGACTGTAGCTCAACCCTACAGTCATGCTAGTTATGGGGAAGGCAAGTaGTATCTGACAGCAGTCTTT +
Preference number: 4 (lower is better)
Translates to: SDLAQFLLTVAQPYSHASYGEGK*YLTAVF
Trigger: AAAGACTGCTGTCAGATAGCACTTGCCTTCCCCATA...ACTAGCATGACTGTAGGGTTGAGCTACAGTCAACAAAAATTGGGCTAAGTCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp AACCAGGAGAAAGGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGTTCACTGCTCCAGATTaGTTCTGGAGTATCAAATTC +
Preference number: 4 (lower is better)
Translates to: NQEKGSKSLLQRISWRNVFTAPD*FWSIKF
Trigger: GAATTTGATACTCCAGAAGCAATCTGGAGCAGTGAA...CACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTTCTCCTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp GCTTTCAGAAGGTTAATGATTGAGGATGCCAGTGAAGGGTGCAGGGACAAAACCGCAATACTGATAAAGTaGTCTTGTGTTACTCTGAAG +
Preference number: 4 (lower is better)
Translates to: AFRRLMIEDASEGCRDKTAILIK*SCVTLK
Trigger: CTTCAGAGTAACACAAGAGCACTTTATCAGTATTGC...GGTTTTGTCCCTGCACCCTTCACTGGCATCCTCAATCATTAACCTTCTGAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp AGTGACTTAGCCCAATTTTTGTTGACTGTAGCTCAACCCTACAGTCATGCTAGTTTTGGCAAAAAGTTCTaGTGTTTGGGCTCGAACCTG +
Preference number: 4 (lower is better)
Translates to: SDLAQFLLTVAQPYSHASFGKKF*CLGSNL
Trigger: CAGGTTCGAGCCCAAACAGCAGAACTTTTTGCCAAA...ACTAGCATGACTGTAGGGTTGAGCTACAGTCAACAAAAATTGGGCTAAGTCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp CAGAGATCCTTGATGATGCTAGGCATTTCCGTGATCTTCTCTCGGCATTCCTCAGGTTTTCAAGGCCAATaGCTTCGAGTAATTTTAAGA +
Preference number: 4 (lower is better)
Translates to: QRSLMMLGISVIFSRHSSGFQGQ*LRVILR
Trigger: TCTTAAAATTACTCGAAGGCATTGGCCTTGAAAACC...TGAGGAATGCCGAGAGAAGATCACGGAAATGCCTAGCATCATCAAGGATCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR GCA 90 bp TTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATCAAACTTCGAGTCATTaGCTTGAGAGCTTTAACAAT +
Preference number: 4 (lower is better)
Translates to: FNVSAGGMWTWHWPFSVYQTSSH*LESFNN
Trigger: ATTGTTAAAGCTCTCAAGGCAATGACTCGAAGTTTG...ATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
CDS-3UTR GCA 90 bp GGGTTATCTTGCATGATATGGTATAACAAAATAGCAACCTTCTCAACAAGGATAATAGCCAAGGTCGCCTaGCTCATGGTCTACAGGAGG +
Preference number: 4 (lower is better)
Translates to: GLSCMIWYNKIATFSTRIIAKVA*LMVYRR
Trigger: CCTCCTGTAGACCATGAGGCAGGCGACCTTGGCTAT...TATCCTTGTTGAGAAGGTTGCTATTTTGTTATACCATATCATGCAAGATAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CCA 90 bp TGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATATATCAACTGCTGCATaGATTATTCCGTTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: WRNVDLALAFQRLLSLVNISTAA*IIPLLL
Trigger: AAGCAACAACGGAATAATCCATGCAGCAGTTGATAT...ATTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CCA 90 bp AACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTTTCGAAGAACCACTaGCTTCTGATTTATATTCTC +
Preference number: 4 (lower is better)
Translates to: NVSAGGMWTWHWPFSVYCLSKNH*LLIYIL
Trigger: GAGAATATAAATCAGAAGCCAGTGGTTCTTCGAAAG...ACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CCA 90 bp GCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCATTTAACATTCCTTTaGTCCACAATTCTTGCATCT +
Preference number: 4 (lower is better)
Translates to: AVRVCFNVSAGGMWTWHWHLTFL*STILAS
Trigger: AGATGCAAGAATTGTGGACCAAAGGAATGTTAAATG...CCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CCA 90 bp GGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGTTCCATATCAAATATaGACTTTCTGTGTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: GSKSLLQRISWRNVDLALVPYQI*TFCVAV
Trigger: AACAGCAACACAGAAAGTCCATATTTGATATGGAAC...CAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CCA 90 bp GTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATATTTCAAGTTGCAGCAAATGCTTTTaGAACCTCCAGTTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: VDLALAFQRLLSLVNISSCSKCF*NLQLES
Trigger: ACTTTCCAACTGGAGGTTCCAAAAGCATTTGCTGCA...ACTTGAAATATTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CCA 90 bp TCTTTTAGAAGCTTAACCGGGTCTTTAATTGGCCAATCTGGAAACCGGAGTGTAAAAAGTTCTGCTGTTTaGGCTCGAACCTGTGGATGT +
Preference number: 4 (lower is better)
Translates to: SFRSLTGSLIGQSGNRSVKSSAV*ARTCGC
Trigger: ACATCCACAGGTTCGAGCCCAAACAGCAGAACTTTT...TACACTCCGGTTTCCAGATTGGCCAATTAAAGACCCGGTTAAGCTTCTAAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CCA 90 bp ACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTATCTGCTGTCATTTTaGCAAAAAGTTCTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: TYQLEECGLGTGLSAFIVYLLSF*QKVLLF
Trigger: AAACAGCAGAACTTTTTGCCAAAATGACAGCAGATA...GACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CCA 90 bp GAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATATCGTAATTCGAACCTTTaGACCTATCAGTTTATCTGC +
Preference number: 4 (lower is better)
Translates to: EECGLGTGLSAFIVSREYRNSNL*TYQFIC
Trigger: GCAGATAAACTGATAGGTCCAAAGGTTCGAATTACG...ATATTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CCA 90 bp GTGCTATCTGACAGCAGTCTTTTCACTTTGGGTAGAGGCCGAATGATGGCATTGAAACAGTACCCTGCTTaGAAAATATCCACACATTGT +
Preference number: 4 (lower is better)
Translates to: VLSDSSLFTLGRGRMMALKQYPA*KISTHC
Trigger: ACAATGTGTGGATATTTTCCAAGCAGGGTACTGTTT...CAATGCCATCATTCGGCCTCTACCCAAAGTGAAAAGACTGCTGTCAGATAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506813.1
ENST00000650455.1
CDS-3UTR TCA 90 bp GGCAAAATGCGTTTCAACAAGTTTGTTGCAGTTGCATTATCAGCTGTCCAGAGTCGCATGAGTTCCAACTaGAAAGACACGCTTATACTT +
Preference number: 4 (lower is better)
Translates to: GKMRFNKFVAVALSAVQSRMSSN*KDTLIL
Trigger: AAGTATAAGCGTGTCTTTTCAGTTGGAACTCATGCG...ACTCTGGACAGCTGATAATGCAACTGCAACAAACTTGTTGAAACGCATTTTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR TCA 90 bp GAAAATATCAACTTAAAGTGCCCAATGCATTCACTCTCAGAACCTGGATTGTATGCTAAGAACCTGAGGTaGAGGCTCTCTACTTCCTCA +
Preference number: 4 (lower is better)
Translates to: ENINLKCPMHSLSEPGLYAKNLR*RLSTSS
Trigger: TGAGGAAGTAGAGAGCCTTCACCTCAGGTTCTTAGC...ATACAATCCAGGTTCTGAGAGTGAATGCATTGGGCACTTTAAGTTGATATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR TCA 90 bp TATAACAAAATAGCAACCTTCTCAACAAGGATAGGGTCAAAGGTCAGCAGTAGCAATTCTTGCATCTCATaGAATCCATACGGGCCACTC +
Preference number: 4 (lower is better)
Translates to: YNKIATFSTRIGSKVSSSNSCIS*NPYGPL
Trigger: GAGTGGCCCGTATGGATTTCATGAGATGCAAGAATT...GCTACTGCTGACCTTTGACCCTATCCTTGTTGAGAAGGTTGCTATTTTGTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506813.1
ENST00000650455.1
CDS-3UTR TCA 90 bp TGGTATAACAAAATAGCAACCTTCTCAACAAGGATAGGGTCAAAGGTCAGCAGTAAGGTCAGCAGTAGCTaGATAATATGGGGAAGGCAA +
Preference number: 4 (lower is better)
Translates to: WYNKIATFSTRIGSKVSSKVSSS*IIWGRQ
Trigger: TTGCCTTCCCCATATTATTCAGCTACTGCTGACCTT...ACTGCTGACCTTTGACCCTATCCTTGTTGAGAAGGTTGCTATTTTGTTATACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506813.1
ENST00000650455.1
CDS-3UTR TCA 90 bp GTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATATTTCAAGTGTTTCTTCACTTTTCTaGATGCCACTCTCTTCTAGT +
Preference number: 4 (lower is better)
Translates to: VDLALAFQRLLSLVNISSVSSLF*MPLSSS
Trigger: ACTAGAAGAGAGTGGCATTCAGAAAAGTGAAGAAAC...ACTTGAAATATTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR TCA 90 bp AGTGACTTAGCCCAATTTTTGTTGACTGTAGCTCAACCCTACAGTCATGCTAGTTGTACCCACTTATGTTaGTCCACAGAGTGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: SDLAQFLLTVAQPYSHASCTHLC*STECFL
Trigger: AAGAAAGCACTCTGTGGATCAACATAAGTGGGTACA...ACTAGCATGACTGTAGGGTTGAGCTACAGTCAACAAAAATTGGGCTAAGTCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp GCTTTCAGAAGGTTAATGATTGAGGATGCCAGTGAAGGGTGCAGGGACAAAACCTCTGACGCAAATAAATaGAATCTACTAAATCCTCCA +
Preference number: 4 (lower is better)
Translates to: AFRRLMIEDASEGCRDKTSDANK*NLLNPP
Trigger: TGGAGGATTTAGTAGATTGCATTTATTTGCGTCAGA...GGTTTTGTCCCTGCACCCTTCACTGGCATCCTCAATCATTAACCTTCTGAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp TGGTATAACAAAATAGCAACCTTCTCAACAAGGATAGGGTCAAAGGTCAGCAGTTATGGGGAAGGCAAGTaGTATCTGACAGCAGTCTTT +
Preference number: 4 (lower is better)
Translates to: WYNKIATFSTRIGSKVSSYGEGK*YLTAVF
Trigger: AAAGACTGCTGTCAGATAGCACTTGCCTTCCCCATA...ACTGCTGACCTTTGACCCTATCCTTGTTGAGAAGGTTGCTATTTTGTTATACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506813.1
ENST00000650455.1
CDS-3UTR GCA 90 bp AGTGACTTAGCCCAATTTTTGTTGACTGTAGCTCAACCCTACAGTCATGCTAGTCTGTTTGCTACCTCCTaGTGGTTTGTTTCTTCACTT +
Preference number: 4 (lower is better)
Translates to: SDLAQFLLTVAQPYSHASLFATS*WFVSSL
Trigger: AAGTGAAGAAACAAACCAGCAGGAGGTAGCAAACAG...ACTAGCATGACTGTAGGGTTGAGCTACAGTCAACAAAAATTGGGCTAAGTCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp GTTGCATTATCAGCTGTCCAGAGTCCCACTAAATGTCTACTTAGCTGTCTGAAACTGTTTGCTACCTCCTaGTGGTTTGTTTCTTCACTT +
Preference number: 4 (lower is better)
Translates to: VALSAVQSPTKCLLSCLKLFATS*WFVSSL
Trigger: AAGTGAAGAAACAAACCAGCAGGAGGTAGCAAACAG...TTTCAGACAGCTAAGTAGACATTTAGTGGGACTCTGGACAGCTGATAATGCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR GCA 90 bp TTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATAGCACCCTTTGCCATTaGTTCTTTGATTATTTTTGT +
Preference number: 4 (lower is better)
Translates to: FNVSAGGMWTWHWPFSVYSTLCH*FFDYFC
Trigger: ACAAAAATAATCAAAGAAGCAATGGCAAAGGGTGCT...ATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp GAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATATGATCAAAGCACCCTTTaGCATTGCTTCTTTGATTAT +
Preference number: 4 (lower is better)
Translates to: EECGLGTGLSAFIVSREYDQSTL*HCFFDY
Trigger: ATAATCAAAGAAGCAATGGCAAAGGGTGCTTTGATC...ATATTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp CATGAAACCAGGAGAAAGGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAGGTTTTCAAGGCCAATaGCTTCGAGTAATTTTAAGA +
Preference number: 4 (lower is better)
Translates to: HETRRKAVRVCFNVSAGGGFQGQ*LRVILR
Trigger: TCTTAAAATTACTCGAAGGCATTGGCCTTGAAAACC...TCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTTCTCCTGGTTTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
CDS-3UTR GCA 90 bp CATGAAACCAGGAGAAAGGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGACAAACTTCGAGTCATTaGCTTGAGAGCTTTAACAAT +
Preference number: 4 (lower is better)
Translates to: HETRRKAVRVCFNVSAGGQTSSH*LESFNN
Trigger: ATTGTTAAAGCTCTCAAGGCAATGACTCGAAGTTTG...TCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTTCTCCTGGTTTCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
CDS-3UTR GCA 90 bp GAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATATCAAACTTCGAGTCATTaGCTTGAGAGCTTTAACAAT +
Preference number: 4 (lower is better)
Translates to: EECGLGTGLSAFIVSREYQTSSH*LESFNN
Trigger: ATTGTTAAAGCTCTCAAGGCAATGACTCGAAGTTTG...ATATTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
CDS-3UTR CCA 90 bp AGTGACTTAGCCCAATTTTTGTTGACTGTAGCTCAACCCTACAGTCATGCTAGTGTTGCAGGATTAATTTaGTCAAAGCCTCCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: SDLAQFLLTVAQPYSHASVAGLI*SKPPGV
Trigger: AACTCCAGGAGGCTTTGACCAAATTAATCCTGCAAC...ACTAGCATGACTGTAGGGTTGAGCTACAGTCAACAAAAATTGGGCTAAGTCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CCA 90 bp AGTGACTTAGCCCAATTTTTGTTGACTGTAGCTCAACCCTACAGTCATGCTAGTAAAGGGTTCTTCCATTaGATGCTACCATCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: SDLAQFLLTVAQPYSHASKGFFH*MLPSPR
Trigger: TCTTGGAGATGGTAGCATCCAATGGAAGAACCCTTT...ACTAGCATGACTGTAGGGTTGAGCTACAGTCAACAAAAATTGGGCTAAGTCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CCA 90 bp GTTGCATTATCAGCTGTCCAGAGTCCCACTAAATGTCTACTTAGCTGTCTGAAAAAAGGGTTCTTCCATTaGATGCTACCATCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: VALSAVQSPTKCLLSCLKKGFFH*MLPSPR
Trigger: TCTTGGAGATGGTAGCATCCAATGGAAGAACCCTTT...TTTCAGACAGCTAAGTAGACATTTAGTGGGACTCTGGACAGCTGATAATGCAAC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CCA 90 bp GTTGCATTATCAGCTGTCCAGAGTCCCACTAAATGTCTACTTAGCTGTCTGAAATTAACCTCAAACTCATaGTGGTTCCAGGAGATCACA +
Preference number: 4 (lower is better)
Translates to: VALSAVQSPTKCLLSCLKLTSNS*WFQEIT
Trigger: TGTGATCTCCTGGAACCACCATGAGTTTGAGGTTAA...TTTCAGACAGCTAAGTAGACATTTAGTGGGACTCTGGACAGCTGATAATGCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CCA 90 bp TGTGGGTTATCTTGCATGATATGGTATAACAAAATAGCAACCTTCTCAACAAGGGTAGCTCGGCTTACATaGAGATGTGCAAGGGTAAGC +
Preference number: 4 (lower is better)
Translates to: CGLSCMIWYNKIATFSTRVARLT*RCARVS
Trigger: GCTTACCCTTGCACATCTCCATGTAAGCCGAGCTAC...CCTTGTTGAGAAGGTTGCTATTTTGTTATACCATATCATGCAAGATAACCCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506813.1
ENST00000650455.1
CDS-3UTR CCA 90 bp TATAACAAAATAGCAACCTTCTCAACAAGGATAGGGTCAAAGGTCAGCAGTAGCTACATTGCTTTGCAGTaGTACTGTAGCTCGGCTTAC +
Preference number: 4 (lower is better)
Translates to: YNKIATFSTRIGSKVSSSYIALQ*YCSSAY
Trigger: GTAAGCCGAGCTACAGTACCACTGCAAAGCAATGTA...GCTACTGCTGACCTTTGACCCTATCCTTGTTGAGAAGGTTGCTATTTTGTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506813.1
ENST00000650455.1
CDS-3UTR CCA 90 bp GTGCTATCTGACAGCAGTCTTTTCACTTTGGGTAGAGGCCGAATGATGGCATTGCATTTAACATTCCTTTaGTCCACAATTCTTGCATCT +
Preference number: 4 (lower is better)
Translates to: VLSDSSLFTLGRGRMMALHLTFL*STILAS
Trigger: AGATGCAAGAATTGTGGACCAAAGGAATGTTAAATG...CAATGCCATCATTCGGCCTCTACCCAAAGTGAAAAGACTGCTGTCAGATAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506813.1
ENST00000650455.1
CDS-3UTR CCA 90 bp TTCTTGCATCTCATGAAATCCATACGGGCCACTCCTTTCTTTGTCTGCGTTGCCCATTTAACATTCCTTTaGTCCACAATTCTTGCATCT +
Preference number: 4 (lower is better)
Translates to: FLHLMKSIRATPFFVCVAHLTFL*STILAS
Trigger: AGATGCAAGAATTGTGGACCAAAGGAATGTTAAATG...GGCAACGCAGACAAAGAAAGGAGTGGCCCGTATGGATTTCATGAGATGCAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CCA 90 bp TGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATGTTCCATATCAAATATaGACTTTCTGTGTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: WRNVDLALAFQRLLSLVNVPYQI*TFCVAV
Trigger: AACAGCAACACAGAAAGTCCATATTTGATATGGAAC...ATTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR TCA 90 bp GGCAAAATGCGTTTCAACAAGTTTGTTGCAGTTGCATTATCAGCTGTCCAGAGTATACTTCCCCCTCCATaGATGTTTTGTTGTGTAGAA +
Preference number: 4 (lower is better)
Translates to: GKMRFNKFVAVALSAVQSILPPP*MFCCVE
Trigger: TTCTACACAACAAAACATTCATGGAGGGGGAAGTAT...ACTCTGGACAGCTGATAATGCAACTGCAACAAACTTGTTGAAACGCATTTTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR TCA 90 bp TATAACAAAATAGCAACCTTCTCAACAAGGATAGGGTCAAAGGTCAGCAGTAGCCTAAAGGCTCTTTCCTaGTCCGCAATGAAATACCTA +
Preference number: 4 (lower is better)
Translates to: YNKIATFSTRIGSKVSSSLKALS*SAMKYL
Trigger: TAGGTATTTCATTGCGGATCAGGAAAGAGCCTTTAG...GCTACTGCTGACCTTTGACCCTATCCTTGTTGAGAAGGTTGCTATTTTGTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR TCA 90 bp CTTTCAGCGTTTATTGTCTCTCGTGAATATTTCAAGTCTGATAGCCAAGGTCGCTGTTTACTTTTGGGGTaGGCAAGAAGCGATGATAAA +
Preference number: 4 (lower is better)
Translates to: LSAFIVSREYFKSDSQGRCLLLG*ARSDDK
Trigger: TTTATCATCGCTTCTTGCTCACCCCAAAAGTAAACA...GCGACCTTGGCTATCAGACTTGAAATATTCACGAGAGACAATAAACGCTGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR TCA 90 bp GGGTTATCTTGCATGATATGGTATAACAAAATAGCAACCTTCTCAACAAGGATACATCCATCCATGCCTTaGGCCCAGCATCTGGTTTTT +
Preference number: 4 (lower is better)
Translates to: GLSCMIWYNKIATFSTRIHPSMP*AQHLVF
Trigger: AAAAACCAGATGCTGGGCTCAAGGCATGGATGGATG...TATCCTTGTTGAGAAGGTTGCTATTTTGTTATACCATATCATGCAAGATAACCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506813.1
ENST00000650455.1
CDS-3UTR TCA 90 bp GTTGCATTATCAGCTGTCCAGAGTCCCACTAAATGTCTACTTAGCTGTCTGAAATGTAAATCTTCTTTATaGCGGTTGAAGAGGATGCTC +
Preference number: 4 (lower is better)
Translates to: VALSAVQSPTKCLLSCLKCKSSL*RLKRML
Trigger: GAGCATCCTCTTCAACCGTCATAAAGAAGATTTACA...TTTCAGACAGCTAAGTAGACATTTAGTGGGACTCTGGACAGCTGATAATGCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR GCA 90 bp GGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATATTTCAAGTCTACAAAGCATATCAACTaGTGCATGGATTATTCCGTT +
Preference number: 4 (lower is better)
Translates to: GLGTGLSAFIVSREYFKSTKHIN*CMDYSV
Trigger: AACGGAATAATCCATGCAGCAGTTGATATGCTTTGT...AGACTTGAAATATTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR GCA 90 bp CTATCTGACAGCAGTCTTTTCACTTTGGGTAGAGGCCGAATGATGGCATTGTCTTTTCTTTGTCTGCGTTaGCAAAATACCATTCCTTTT +
Preference number: 4 (lower is better)
Translates to: LSDSSLFTLGRGRMMALSFLCLR*QNTIPF
Trigger: AAAAGGAATGGTATTTTGGCAACGCAGACAAAGAAA...AGACAATGCCATCATTCGGCCTCTACCCAAAGTGAAAAGACTGCTGTCAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000506813.1
ENST00000650455.1
CDS-3UTR GCA 90 bp AGTGACTTAGCCCAATTTTTGTTGACTGTAGCTCAACCCTACAGTCATGCTAGTCTTCACTTTTCTGAATaGCACTCTCTTCTAGTGTGT +
Preference number: 4 (lower is better)
Translates to: SDLAQFLLTVAQPYSHASLHFSE*HSLLVC
Trigger: ACACACTAGAAGAGAGTGGCATTCAGAAAAGTGAAG...ACTAGCATGACTGTAGGGTTGAGCTACAGTCAACAAAAATTGGGCTAAGTCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CCA 90 bp TTCCATTGTTATAGTCCGAATAAGCATGGGGTATCCTGCATATTTATAAGGCTGACGACATCCCCTTCTTaGGACAGTAATGCTGTTATG +
Preference number: 4 (lower is better)
Translates to: FHCYSPNKHGVSCIFIRLTTSPS*DSNAVM
Trigger: CATAACAGCATTACTGTCCCAAGAAGGGGATGTCGT...CAGCCTTATAAATATGCAGGATACCCCATGCTTATTCGGACTATAACAATGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CCA 90 bp AGTGACTTAGCCCAATTTTTGTTGACTGTAGCTCAACCCTACAGTCATGCTAGTTATATTCTCTGGATCTaGCCCATCCACTATTTTTGC +
Preference number: 4 (lower is better)
Translates to: SDLAQFLLTVAQPYSHASYILWI*PIHYFC
Trigger: GCAAAAATAGTGGATGGGCCAGATCCAGAGAATATA...ACTAGCATGACTGTAGGGTTGAGCTACAGTCAACAAAAATTGGGCTAAGTCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CCA 90 bp TGGATAGTTGATTATAGGAATGGGGCAATACTGATAAAGTGCTCTTGTGTTACTCATGGACACTCAGTTTaGCAAGGCTGTTTGCTACCT +
Preference number: 4 (lower is better)
Translates to: WIVDYRNGAILIKCSCVTHGHSV*QGCLLP
Trigger: AGGTAGCAAACAGCCTTGCCAAACTGAGTGTCCATG...AGTAACACAAGAGCACTTTATCAGTATTGCCCCATTCCTATAATCAACTATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CCA 90 bp GCTTCACAGGCTAGACCAACAGTATCTGCTCGCTTTTTCATTCCATTCATCAGTAAACAGTACCCTGCTTaGAAAATATCCACACATTGT +
Preference number: 4 (lower is better)
Translates to: ASQARPTVSARFFIPFISKQYPA*KISTHC
Trigger: ACAATGTGTGGATATTTTCCAAGCAGGGTACTGTTT...ACTGATGAATGGAATGAAAAAGCGAGCAGATACTGTTGGTCTAGCCTGTGAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR TCA 90 bp TATAACAAAATAGCAACCTTCTCAACAAGGATAGGGTCAAAGGTCAGCAGTAGCCGTTGTTGCTTCTTTTaGGTGCTTTTACTACCTTCA +
Preference number: 4 (lower is better)
Translates to: YNKIATFSTRIGSKVSSSRCCFF*VLLLPS
Trigger: TGAAGGTAGTAAAAGCACTCAAAAGAAGCAACAACG...GCTACTGCTGACCTTTGACCCTATCCTTGTTGAGAAGGTTGCTATTTTGTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR TCA 90 bp TATAACAAAATAGCAACCTTCTCAACAAGGATAGGGTCAAAGGTCAGCAGTAGCGTATCCTGCTGTTTGTaGCTCAGAAATGAACAAATC +
Preference number: 4 (lower is better)
Translates to: YNKIATFSTRIGSKVSSSVSCCL*LRNEQI
Trigger: GATTTGTTCATTTCTGAGTCACAAACAGCAGGATAC...GCTACTGCTGACCTTTGACCCTATCCTTGTTGAGAAGGTTGCTATTTTGTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR GCA 90 bp GTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATATTTCAAGTTCTGACGCAAATAAATaGAATCTACTAAATCCTCCA +
Preference number: 4 (lower is better)
Translates to: VDLALAFQRLLSLVNISSSDANK*NLLNPP
Trigger: TGGAGGATTTAGTAGATTGCATTTATTTGCGTCAGA...ACTTGAAATATTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR GCA 90 bp AGTGACTTAGCCCAATTTTTGTTGACTGTAGCTCAACCCTACAGTCATGCTAGTAAGCATATCAACTGCTaGATGGATTATTCCGTTGTT +
Preference number: 4 (lower is better)
Translates to: SDLAQFLLTVAQPYSHASKHINC*MDYSVV
Trigger: AACAACGGAATAATCCATGCAGCAGTTGATATGCTT...ACTAGCATGACTGTAGGGTTGAGCTACAGTCAACAAAAATTGGGCTAAGTCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR GCA 90 bp TGTGGGTTATCTTGCATGATATGGTATAACAAAATAGCAACCTTCTCAACAAGGGTAAACATCGCAGTATaGAAGTGTCGAGGTAAGGCA +
Preference number: 4 (lower is better)
Translates to: CGLSCMIWYNKIATFSTRVNIAV*KCRGKA
Trigger: TGCCTTACCTCGACACTTGCATACTGCGATGTTTAC...CCTTGTTGAGAAGGTTGCTATTTTGTTATACCATATCATGCAAGATAACCCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR GCA 90 bp GAAAATATCAACTTAAAGTGCCCAATGCATTCACTCTCAGAACCTGGATTGTATAGCCTGGCGGCAAAATaGGTTTCAACAAGTTTGTTG +
Preference number: 4 (lower is better)
Translates to: ENINLKCPMHSLSEPGLYSLAAK*VSTSLL
Trigger: CAACAAACTTGTTGAAACGCATTTTGCCGCCAGGCT...ATACAATCCAGGTTCTGAGAGTGAATGCATTGGGCACTTTAAGTTGATATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR GCA 90 bp GGGTTATCTTGCATGATATGGTATAACAAAATAGCAACCTTCTCAACAAGGATAAAGCGATCTCCATGTTaGTCTGACTCCACTTTTGCC +
Preference number: 4 (lower is better)
Translates to: GLSCMIWYNKIATFSTRIKRSPC*SDSTFA
Trigger: GGCAAAAGTGGAGTCAGAGCAACATGGAGATCGCTT...TATCCTTGTTGAGAAGGTTGCTATTTTGTTATACCATATCATGCAAGATAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CCA 90 bp AGTGACTTAGCCCAATTTTTGTTGACTGTAGCTCAACCCTACAGTCATGCTAGTATATCAACTGCTGCATaGATTATTCCGTTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: SDLAQFLLTVAQPYSHASISTAA*IIPLLL
Trigger: AAGCAACAACGGAATAATCCATGCAGCAGTTGATAT...ACTAGCATGACTGTAGGGTTGAGCTACAGTCAACAAAAATTGGGCTAAGTCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CCA 90 bp GTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATATTTCAAGTTATCTGCTGTCATTTTaGCAAAAAGTTCTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: VDLALAFQRLLSLVNISSYLLSF*QKVLLF
Trigger: AAACAGCAGAACTTTTTGCCAAAATGACAGCAGATA...ACTTGAAATATTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR GCA 90 bp GTTGCATTATCAGCTGTCCAGAGTCCCACTAAATGTCTACTTAGCTGTCTGAAATTGAGAAAGGTTTGCTaGTTTATCTCAGCTATTTGT +
Preference number: 4 (lower is better)
Translates to: VALSAVQSPTKCLLSCLKLRKVC*FISAIC
Trigger: ACAAATAGCTGAGATAAAGCAGCAAACCTTTCTCAA...TTTCAGACAGCTAAGTAGACATTTAGTGGGACTCTGGACAGCTGATAATGCAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CCA 90 bp AAGGATCAACTTGTTAAGGAAGAGAATCAACCTATCTCGTTCAAGTTTATCTGTGAACAGTTGACAGTATaGAAAGCTAGCTCTGTAGCC +
Preference number: 4 (lower is better)
Translates to: KDQLVKEENQPISFKFICEQLTV*KASSVA
Trigger: GGCTACAGAGCTAGCTTTCCATACTGTCAACTGTTC...ACAGATAAACTTGAACGAGATAGGTTGATTCTCTTCCTTAACAAGTTGATCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR TCA 90 bp TTCCATTGTTATAGTCCGAATAAGCATGGGGTATCCTGCATATTTATAAGGCTGGAAAAGGAGGTCATCTaGAGTTTCCATTGTTATAGT +
Preference number: 4 (lower is better)
Translates to: FHCYSPNKHGVSCIFIRLEKEVI*SFHCYS
Trigger: ACTATAACAATGGAAACTTCAGATGACCTCCTTTTC...CAGCCTTATAAATATGCAGGATACCCCATGCTTATTCGGACTATAACAATGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR TCA 90 bp TGTGGGTTATCTTGCATGATATGGTATAACAAAATAGCAACCTTCTCAACAAGGTCCATAAGATTTCCTTaGAAAACAGTACCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: CGLSCMIWYNKIATFSTRSIRFP*KTVPCL
Trigger: CAAGCAGGGTACTGTTTTTCAAGGAAATCTTATGGA...CCTTGTTGAGAAGGTTGCTATTTTGTTATACCATATCATGCAAGATAACCCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506813.1
ENST00000650455.1
CDS-3UTR GCA 90 bp TGGATAGTTGATTATAGGAATGGGGCAATACTGATAAAGTGCTCTTGTGTTACTGTTCCTATGATTCATTaGCTGGATAACTTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: WIVDYRNGAILIKCSCVTVPMIH*LDNFGK
Trigger: CTTCCCAAAGTTATCCAGGCAATGAATCATAGGAAC...AGTAACACAAGAGCACTTTATCAGTATTGCCCCATTCCTATAATCAACTATCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CCA 90 bp GGGTTATCTTGCATGATATGGTATAACAAAATAGCAACCTTCTCAACAAGGATAGGATTCTTATCAGGGTaGTACTTTTGTGCAAGTCTG +
Preference number: 4 (lower is better)
Translates to: GLSCMIWYNKIATFSTRIGFLSG*YFCASL
Trigger: CAGACTTGCACAAAAGTACCACCCTGATAAGAATCC...TATCCTTGTTGAGAAGGTTGCTATTTTGTTATACCATATCATGCAAGATAACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR TCA 90 bp AAGGATCAACTTGTTAAGGAAGAGAATCAACCTATCTCGTTCAAGTTTATCTGTAACAAATCATGTTTCTaGTCTTTGAAGGCACTCCAG +
Preference number: 4 (lower is better)
Translates to: KDQLVKEENQPISFKFICNKSCF*SLKALQ
Trigger: CTGGAGTGCCTTCAAAGATCAGAAACATGATTTGTT...ACAGATAAACTTGAACGAGATAGGTTGATTCTCTTCCTTAACAAGTTGATCCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR TCA 90 bp AAGGATCAACTTGTTAAGGAAGAGAATCAACCTATCTCGTTCAAGTTTATCTGTTCCATAAGATTTCCTTaGAAAACAGTACCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: KDQLVKEENQPISFKFICSIRFP*KTVPCL
Trigger: CAAGCAGGGTACTGTTTTTCAAGGAAATCTTATGGA...ACAGATAAACTTGAACGAGATAGGTTGATTCTCTTCCTTAACAAGTTGATCCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR GCA 90 bp GGGTTATCTTGCATGATATGGTATAACAAAATAGCAACCTTCTCAACAAGGATACTTCACTTTTCTGAATaGCACTCTCTTCTAGTGTGT +
Preference number: 4 (lower is better)
Translates to: GLSCMIWYNKIATFSTRILHFSE*HSLLVC
Trigger: ACACACTAGAAGAGAGTGGCATTCAGAAAAGTGAAG...TATCCTTGTTGAGAAGGTTGCTATTTTGTTATACCATATCATGCAAGATAACCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR GCA 90 bp TGGATAGTTGATTATAGGAATGGGGCAATACTGATAAAGTGCTCTTGTGTTACTTTTCTTTGTCTGCGTTaGCAAAATACCATTCCTTTT +
Preference number: 4 (lower is better)
Translates to: WIVDYRNGAILIKCSCVTFLCLR*QNTIPF
Trigger: AAAAGGAATGGTATTTTGGCAACGCAGACAAAGAAA...AGTAACACAAGAGCACTTTATCAGTATTGCCCCATTCCTATAATCAACTATCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CAA 90 bp TGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTGCCAGGAAACCAGCTTaGGATGCCACAAGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: CFNVSAGGMWTWHWPFSVARKPA*DATSLL
Trigger: GAGGAGGCTTGTGGCATCCAAAGCTGGTTTCCTGGC...AACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS GCA 90 bp GCGAAACTTTGGAAGCTGAGTGAAAGCCAGGAAACCAGCTTTGGATaGCACAAGCCTCCTCACAGCCTGGAACTGACTCTCAAGTTCCGC +
Preference number: 5 (lower is better)
Translates to: AKLWKLSESQETSFG*HKPPHSLELTLKFR
Trigger: GCGGAACTTGAGAGTCAGTTCCAGGCTGTGAGGAGGCTTGTGGCATCCAAAGCTGGTTTCCTGGCTTTCACTCAGCTTCCAAAGTTTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260818.11
ENST00000471925.1
ENST00000486798.5
ENST00000650455.1
CDS-3UTR CAA 90 bp AGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCGCCAGGAAACCAGCTTaGGATGCCACAAGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: SKSLLQRISWRNVDLALAARKPA*DATSLL
Trigger: GAGGAGGCTTGTGGCATCCAAAGCTGGTTTCCTGGC...GGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp GAGACACCACTTAAGCTGGGGTATGGACTGAAGTGGTCGCCATCCATCCATGCCGGGCCACTCCTTTCTTaGTCTGCGTTGCCAAAATAC +
Preference number: 5 (lower is better)
Translates to: ETPLKLGYGLKWSPSIHAGPLLS*SALPKY
Trigger: GTATTTTGGCAACGCAGACAAAGAAAGGAGTGGCCC...GGCATGGATGGATGGCGACCACTTCAGTCCATACCCCAGCTTAAGTGGTGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS TCA 90 bp AGGAAACCAGCTTTGGATGCCACAAGCCTCCTCACAGCCTGGAACTaGCTCTCAAGTTCCGCATTTGAAGCAACGACATCCCCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: RKPALDATSLLTAWN*LSSSAFEATTSPSW
Trigger: CCAAGAAGGGGATGTCGTTGCTTCAAATGCGGAACTTGAGAGTCAGTTCCAGGCTGTGAGGAGGCTTGTGGCATCCAAAGCTGGTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260818.11
ENST00000471925.1
ENST00000486798.5
ENST00000650455.1
CDS-3UTR CAA 90 bp GAGACACCACTTAAGCTGGGGTATGGACTGAAGTGGTCGCCATCCATCCATGCCTTGAGGGCTGAACAGTaGACAGTATGGAAAGCTAGC +
Preference number: 5 (lower is better)
Translates to: ETPLKLGYGLKWSPSIHALRAEQ*TVWKAS
Trigger: GCTAGCTTTCCATACTGTCAACTGTTCAGCCCTCAA...GGCATGGATGGATGGCGACCACTTCAGTCCATACCCCAGCTTAAGTGGTGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CAA 90 bp AGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCAGCCAACTGCTGCACTaGACCAGCTCCATGAACTCG +
Preference number: 5 (lower is better)
Translates to: SKSLLQRISWRNVDLALASQLLH*TSSMNS
Trigger: CGAGTTCATGGAGCTGGTCAAGTGCAGCAGTTGGCT...GGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp ATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCAGCCAACTGCTGCACTaGACCAGCTCCATGAACTCG +
Preference number: 5 (lower is better)
Translates to: ISWRNVDLALAFQRLLSLSQLLH*TSSMNS
Trigger: CGAGTTCATGGAGCTGGTCAAGTGCAGCAGTTGGCT...GAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp ACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCCAGGCAACTTCCAGTTaGCCTCAGGGTTGTCCTGCT +
Preference number: 5 (lower is better)
Translates to: TYQLEECGLGTGLSAFIVQATSS*PQGCPA
Trigger: AGCAGGACAACCCTGAGGCAAACTGGAAGTTGCCTG...GACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp CTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAACAGGCAACTTCCAGTTaGCCTCAGGGTTGTCCTGCT +
Preference number: 5 (lower is better)
Translates to: LEECGLGTGLSAFIVSREQATSS*PQGCPA
Trigger: AGCAGGACAACCCTGAGGCAAACTGGAAGTTGCCTG...TTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS TCA 90 bp GCATCTGCAAAGTTGCCATTTGGAGGCGTAGCTAAGAACCTGAGGTaGAGGCTCTCTACTTCCTCATCAACAGGCATGCTGAGTAACCCC +
Preference number: 5 (lower is better)
Translates to: ASAKLPFGGVAKNLR*RLSTSSSTGMLSNP
Trigger: GGGGTTACTCAGCATGCCTGTTGATGAGGAAGTAGAGAGCCTTCACCTCAGGTTCTTAGCTACGCCTCCAAATGGCAACTTTGCAGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260818.11
ENST00000471925.1
ENST00000486798.5
ENST00000650455.1
CDS-3UTR CAA 90 bp ACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCCCATCCATCCATGCCTaGAGCCCAGCATCTGGTTTT +
Preference number: 5 (lower is better)
Translates to: TYQLEECGLGTGLSAFIVPSIHA*SPASGF
Trigger: AAAACCAGATGCTGGGCTCAAGGCATGGATGGATGG...GACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp ACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCATGCGGTCCCTGTCCTaGAGGCAGATTAAGCACTTC +
Preference number: 5 (lower is better)
Translates to: TYQLEECGLGTGLSAFIVMRSLS*RQIKHF
Trigger: GAAGTGCTTAATCTGCCTCAAGGACAGGGACCGCAT...GACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp TGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTACCCGACAGAGATCCTaGATGATGCTAGGCATTTCC +
Preference number: 5 (lower is better)
Translates to: CFNVSAGGMWTWHWPFSVTRQRS*MMLGIS
Trigger: GGAAATGCCTAGCATCATCAAGGATCTCTGTCGGGT...AACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp ATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGCATGGACACTCAGTTaGGCAAGGCTGTTTGCTACC +
Preference number: 5 (lower is better)
Translates to: ISWRNVDLALAFQRLLSLAWTLS*ARLFAT
Trigger: GGTAGCAAACAGCCTTGCCAAACTGAGTGTCCATGC...GAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp GAGACACCACTTAAGCTGGGGTATGGACTGAAGTGGTCGCCATCCATCCATGCCGACTTAGCCCAATTTTaGTTGACTGTAGCTCAACCC +
Preference number: 5 (lower is better)
Translates to: ETPLKLGYGLKWSPSIHADLAQF*LTVAQP
Trigger: GGGTTGAGCTACAGTCAACAAAAATTGGGCTAAGTC...GGCATGGATGGATGGCGACCACTTCAGTCCATACCCCAGCTTAAGTGGTGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CAA 90 bp ACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCGATGGCCACGCAGACTaGATGCAGGAGAGGGAAATA +
Preference number: 5 (lower is better)
Translates to: TYQLEECGLGTGLSAFIVDGHAD*MQEREI
Trigger: TATTTCCCTCTCCTGCATCAAGTCTGCGTGGCCATC...GACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp CTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAAGTTGAACTCCGTTCCTaGTCCTTTTCCAACAGGGCT +
Preference number: 5 (lower is better)
Translates to: LEECGLGTGLSAFIVSREVELRS*SFSNRA
Trigger: AGCCCTGTTGGAAAAGGACAAGGAACGGAGTTCAAC...TTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp CTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAAACAGCATCTGCAAAGTaGCCATTTGGAGGCGTAGCT +
Preference number: 5 (lower is better)
Translates to: LEECGLGTGLSAFIVSRETASAK*PFGGVA
Trigger: AGCTACGCCTCCAAATGGCAACTTTGCAGATGCTGT...TTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp GAGACACCACTTAAGCTGGGGTATGGACTGAAGTGGTCGCCATCCATCCATGCCCCCAGCATCTGGTTTTaGCATTTAACATTCCTTTGG +
Preference number: 5 (lower is better)
Translates to: ETPLKLGYGLKWSPSIHAPSIWF*HLTFLW
Trigger: CCAAAGGAATGTTAAATGCAAAAACCAGATGCTGGG...GGCATGGATGGATGGCGACCACTTCAGTCCATACCCCAGCTTAAGTGGTGTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CAA 90 bp GTGCTATCTGACAGCAGTCTTTTCACTTTGGGTAGAGGCCGAATGATGGCATTGATGCGGTCCCTGTCCTaGAGGCAGATTAAGCACTTC +
Preference number: 5 (lower is better)
Translates to: VLSDSSLFTLGRGRMMALMRSLS*RQIKHF
Trigger: GAAGTGCTTAATCTGCCTCAAGGACAGGGACCGCAT...CAATGCCATCATTCGGCCTCTACCCAAAGTGAAAAGACTGCTGTCAGATAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CAA 90 bp ATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCACCCGACAGAGATCCTaGATGATGCTAGGCATTTCC +
Preference number: 5 (lower is better)
Translates to: ISWRNVDLALAFQRLLSLTRQRS*MMLGIS
Trigger: GGAAATGCCTAGCATCATCAAGGATCTCTGTCGGGT...GAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp ATTTCAAGTCTGATAGCCAAGGTCGCCTGCCTCATGGTCTACAGGAGGTGGCAGAAAGGCAGTAAGAGTTaGCTTCAACGTATCAGCTGG +
Preference number: 5 (lower is better)
Translates to: ISSLIAKVACLMVYRRWQKGSKS*LQRISW
Trigger: CCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTT...CTGCCACCTCCTGTAGACCATGAGGCAGGCGACCTTGGCTATCAGACTTGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509279.1
ENST00000650455.1
CDS-3UTR CAA 90 bp TTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATGATGGCCACGCAGACTaGATGCAGGAGAGGGAAATA +
Preference number: 5 (lower is better)
Translates to: FNVSAGGMWTWHWPFSVYDGHAD*MQEREI
Trigger: TATTTCCCTCTCCTGCATCAAGTCTGCGTGGCCATC...ATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp GAGACACCACTTAAGCTGGGGTATGGACTGAAGTGGTCGCCATCCATCCATGCCGACGTTGAGAAAGGTTaGCTGCTTTATCTCAGCTAT +
Preference number: 5 (lower is better)
Translates to: ETPLKLGYGLKWSPSIHADVEKG*LLYLSY
Trigger: ATAGCTGAGATAAAGCAGCAAACCTTTCTCAACGTC...GGCATGGATGGATGGCGACCACTTCAGTCCATACCCCAGCTTAAGTGGTGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CAA 90 bp CTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATCTCAAGTTCCGCATTaGAAGCAACGACATCCCCTT +
Preference number: 5 (lower is better)
Translates to: LEECGLGTGLSAFIVSRESQVPH*KQRHPL
Trigger: AAGGGGATGTCGTTGCTTCAAATGCGGAACTTGAGA...TTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp GTGCTATCTGACAGCAGTCTTTTCACTTTGGGTAGAGGCCGAATGATGGCATTGGGGCCACTCCTTTCTTaGTCTGCGTTGCCAAAATAC +
Preference number: 5 (lower is better)
Translates to: VLSDSSLFTLGRGRMMALGPLLS*SALPKY
Trigger: GTATTTTGGCAACGCAGACAAAGAAAGGAGTGGCCC...CAATGCCATCATTCGGCCTCTACCCAAAGTGAAAAGACTGCTGTCAGATAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000506813.1
ENST00000650455.1
CDS-3UTR CAA 90 bp ACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCAGCAGTCTTTTCACTTaGGGTAGAGGCCGAATGATG +
Preference number: 5 (lower is better)
Translates to: TYQLEECGLGTGLSAFIVSSLFT*GRGRMM
Trigger: CATCATTCGGCCTCTACCCAAAGTGAAAAGACTGCT...GACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp CGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTAGCAGTCTTTTCACTTaGGGTAGAGGCCGAATGATG +
Preference number: 5 (lower is better)
Translates to: RISWRNVDLALAFQRLLSSSLFT*GRGRMM
Trigger: CATCATTCGGCCTCTACCCAAAGTGAAAAGACTGCT...AGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp ACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCGCAACAGGAAGCACATaGGAACCTGTGTACATCATG +
Preference number: 5 (lower is better)
Translates to: TYQLEECGLGTGLSAFIVATGST*EPVYIM
Trigger: CATGATGTACACAGGTTCCAATGTGCTTCCTGTTGC...GACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp TGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTATCAGGGTGGTACTTTaGTGCAAGTCTGAAGTAAGC +
Preference number: 5 (lower is better)
Translates to: CFNVSAGGMWTWHWPFSVIRVVL*CKSEVS
Trigger: GCTTACTTCAGACTTGCACAAAAGTACCACCCTGAT...AACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp CTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATTGAGGGCTGAACAGTaGACAGTATGGAAAGCTAGC +
Preference number: 5 (lower is better)
Translates to: LEECGLGTGLSAFIVSRELRAEQ*TVWKAS
Trigger: GCTAGCTTTCCATACTGTCAACTGTTCAGCCCTCAA...TTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp GAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATATGCATGGACACTCAGTTaGGCAAGGCTGTTTGCTACC +
Preference number: 5 (lower is better)
Translates to: EECGLGTGLSAFIVSREYAWTLS*ARLFAT
Trigger: GGTAGCAAACAGCCTTGCCAAACTGAGTGTCCATGC...ATATTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp AGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCGAATGTGTGCAAGTATaGGGCCTGCGAGCCTATATA +
Preference number: 5 (lower is better)
Translates to: SKSLLQRISWRNVDLALAECVQV*GLRAYI
Trigger: TATATAGGCTCGCAGGCCCAATACTTGCACACATTC...GGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp TTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATATTGCCTGGATAACTTaGGGAAGATGGCCCAATGGC +
Preference number: 5 (lower is better)
Translates to: FNVSAGGMWTWHWPFSVYIAWIT*GRWPNG
Trigger: GCCATTGGGCCATCTTCCCAAAGTTATCCAGGCAAT...ATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS GCA 90 bp AGGGTTCTTCCATTGGATGCTACCATCTCCAAGAGCATATCAAACTaGTGCCCTTCAGTTGTCTCACTATATGGAGCACAGAGGGCAAAG +
Preference number: 5 (lower is better)
Translates to: RVLPLDATISKSISN*CPSVVSLYGAQRAK
Trigger: CTTTGCCCTCTGTGCTCCATATAGTGAGACAACTGAAGGGCAGCAGTTTGATATGCTCTTGGAGATGGTAGCATCCAATGGAAGAACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000486798.5
ENST00000650455.1
CDS GCA 90 bp GCTGCCACTAAGTTAGATCTTTACTGCGCAAACAGCTTTCAGGTGTaGTGCTTCTTTAGCCCTGTGACTACCCTAGCTCAGCAACTCATT +
Preference number: 5 (lower is better)
Translates to: AATKLDLYCANSFQV*CFFSPVTTLAQQLI
Trigger: AATGAGTTGCTGAGCTAGGGTAGTCACAGGGCTAAAGAAGCAGCACACCTGAAAGCTGTTTGCGCAGTAAAGATCTAACTTAGTGGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471925.1
CDS-3UTR CAA 90 bp CGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTTTACGAAATGTGAGGTaGAACTCCGTTCCTTGTCCT +
Preference number: 5 (lower is better)
Translates to: RISWRNVDLALAFQRLLSLRNVR*NSVPCP
Trigger: AGGACAAGGAACGGAGTTCAACCTCACATTTCGTAA...AGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp GCTTTCAGAAGGTTAATGATTGAGGATGCCAGTGAAGGGTGCAGGGACAAAACCGGTTGCAGGATTAATTaGGTCAAAGCCTCCTGGAGT +
Preference number: 5 (lower is better)
Translates to: AFRRLMIEDASEGCRDKTGCRIN*VKASWS
Trigger: ACTCCAGGAGGCTTTGACCAAATTAATCCTGCAACC...GGTTTTGTCCCTGCACCCTTCACTGGCATCCTCAATCATTAACCTTCTGAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp CTATCTGACAGCAGTCTTTTCACTTTGGGTAGAGGCCGAATGATGGCATTGTCTACAGCATCTGCAAAGTaGCCATTTGGAGGCGTAGCT +
Preference number: 5 (lower is better)
Translates to: LSDSSLFTLGRGRMMALSTASAK*PFGGVA
Trigger: AGCTACGCCTCCAAATGGCAACTTTGCAGATGCTGT...AGACAATGCCATCATTCGGCCTCTACCCAAAGTGAAAAGACTGCTGTCAGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CAA 90 bp TTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTCTCAAGTTCCGCATTaGAAGCAACGACATCCCCTT +
Preference number: 5 (lower is better)
Translates to: FNVSAGGMWTWHWPFSVYSQVPH*KQRHPL
Trigger: AAGGGGATGTCGTTGCTTCAAATGCGGAACTTGAGA...ATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp TGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTCCGTTGTTGCTTCTTTaGAGTGCTTTTACTACCTTC +
Preference number: 5 (lower is better)
Translates to: CFNVSAGGMWTWHWPFSVPLLLL*SAFTTF
Trigger: GAAGGTAGTAAAAGCACTCAAAAGAAGCAACAACGG...AACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp GAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATATACTGCTGCCCTTCAGTaGTCTCACTATATGGAGCAC +
Preference number: 5 (lower is better)
Translates to: EECGLGTGLSAFIVSREYTAALQ*SHYMEH
Trigger: GTGCTCCATATAGTGAGACAACTGAAGGGCAGCAGT...ATATTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp CTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAAAAAAGGGTTCTTCCATaGGATGCTACCATCTCCAAG +
Preference number: 5 (lower is better)
Translates to: LEECGLGTGLSAFIVSREKRVLP*DATISK
Trigger: CTTGGAGATGGTAGCATCCAATGGAAGAACCCTTTT...TTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp TGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTTCAATTACATTGCTTaGCAGTGGTACTGTAGCTCG +
Preference number: 5 (lower is better)
Translates to: CFNVSAGGMWTWHWPFSVFNYIA*QWYCSS
Trigger: CGAGCTACAGTACCACTGCAAAGCAATGTAATTGAA...AACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp GGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATATTTCAAGTCTCCATCCATCCATGCCTaGAGCCCAGCATCTGGTTTT +
Preference number: 5 (lower is better)
Translates to: GLGTGLSAFIVSREYFKSPSIHA*SPASGF
Trigger: AAAACCAGATGCTGGGCTCAAGGCATGGATGGATGG...AGACTTGAAATATTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CAA 90 bp AGGTCGCCTGCCTCATGGTCTACAGGAGGTGGCAGGTTAGACATGACTGATGTAACAATGGTGATTCTTTaGAGAAAAGGAGGTCATCTG +
Preference number: 5 (lower is better)
Translates to: RSPASWSTGGGRLDMTDVTMVIL*RKGGHL
Trigger: CAGATGACCTCCTTTTCTCAAAAGAATCACCATTGT...TACATCAGTCATGTCTAACCTGCCACCTCCTGTAGACCATGAGGCAGGCGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CAA 90 bp CAGCGTTTATTGTCTCTCGTGAATATTTCAAGTCTGATAGCCAAGGTCGCCTGCCTGAGCTCTTCAGCATaGAGGGCTGAACAGTTGACA +
Preference number: 5 (lower is better)
Translates to: QRLLSLVNISSLIAKVACLSSSA*RAEQLT
Trigger: TGTCAACTGTTCAGCCCTCAATGCTGAAGAGCTCAG...GCAGGCGACCTTGGCTATCAGACTTGAAATATTCACGAGAGACAATAAACGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CAA 90 bp GCTTTCAGAAGGTTAATGATTGAGGATGCCAGTGAAGGGTGCAGGGACAAAACCACGCGGGGAATACTCTaGCCAAAATATAGTACCCGA +
Preference number: 5 (lower is better)
Translates to: AFRRLMIEDASEGCRDKTTRGIL*PKYSTR
Trigger: TCGGGTACTATATTTTGGCAAGAGTATTCCCCGCGT...GGTTTTGTCCCTGCACCCTTCACTGGCATCCTCAATCATTAACCTTCTGAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp CAGAGATCCTTGATGATGCTAGGCATTTCCGTGATCTTCTCTCGGCATTCCTCAACGCGGGGAATACTCTaGCCAAAATATAGTACCCGA +
Preference number: 5 (lower is better)
Translates to: QRSLMMLGISVIFSRHSSTRGIL*PKYSTR
Trigger: TCGGGTACTATATTTTGGCAAGAGTATTCCCCGCGT...TGAGGAATGCCGAGAGAAGATCACGGAAATGCCTAGCATCATCAAGGATCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CAA 90 bp TTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTCTACCTCCTGCTGGTTaGTTTCTTCACTTTTCTGAA +
Preference number: 5 (lower is better)
Translates to: LLQRISWRNVDLALAFQRLPPAG*FLHFSE
Trigger: TTCAGAAAAGTGAAGAAACAAACCAGCAGGAGGTAG...ACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp TGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTGAACCTGTGGATGTGTaGAATTGCAGAACATATCCA +
Preference number: 5 (lower is better)
Translates to: CFNVSAGGMWTWHWPFSVEPVDV*NCRTYP
Trigger: TGGATATGTTCTGCAATTCAACACATCCACAGGTTC...AACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp TTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATAAAAAGTTCTGCTGTTaGGGCTCGAACCTGTGGATG +
Preference number: 5 (lower is better)
Translates to: FNVSAGGMWTWHWPFSVYKKFCC*GSNLWM
Trigger: CATCCACAGGTTCGAGCCCAAACAGCAGAACTTTTT...ATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp TTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATACAGCAGCTTCAGGATaGTCTCTCATAGCATCCATG +
Preference number: 5 (lower is better)
Translates to: FNVSAGGMWTWHWPFSVYTAASG*SLIASM
Trigger: CATGGATGCTATGAGAGACAATCCTGAAGCTGCTGT...ATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp CTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAAGACACACTGTTGCCATaGTCAAGGTTTCCAGAGTTT +
Preference number: 5 (lower is better)
Translates to: LEECGLGTGLSAFIVSREDTLLP*SRFPEF
Trigger: AAACTCTGGAAACCTTGACAATGGCAACAGTGTGTC...TTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp TGCATCCGATCAGCATCCTTCTCAGGTACGAGATCTGAGCTTTCCAAGTATGCCGACACACTGTTGCCATaGTCAAGGTTTCCAGAGTTT +
Preference number: 5 (lower is better)
Translates to: CIRSASFSGTRSELSKYADTLLP*SRFPEF
Trigger: AAACTCTGGAAACCTTGACAATGGCAACAGTGTGTC...GGCATACTTGGAAAGCTCAGATCTCGTACCTGAGAAGGATGCTGATCGGATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CAA 90 bp ATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCAAAGGCAGTAAGAGTTaGCTTCAACGTATCAGCTGG +
Preference number: 5 (lower is better)
Translates to: ISWRNVDLALAFQRLLSLKGSKS*LQRISW
Trigger: CCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTT...GAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
CDS-3UTR CAA 90 bp AGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCAAAGGCAGTAAGAGTTaGCTTCAACGTATCAGCTGG +
Preference number: 5 (lower is better)
Translates to: SKSLLQRISWRNVDLALAKGSKS*LQRISW
Trigger: CCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTT...GGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
CDS-3UTR CAA 90 bp ACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCGTGTACCCACTTATGTaGATCCACAGAGTGCTTTCT +
Preference number: 5 (lower is better)
Translates to: TYQLEECGLGTGLSAFIVVYPLM*IHRVLS
Trigger: AGAAAGCACTCTGTGGATCAACATAAGTGGGTACAC...GACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000509279.1
ENST00000650455.1
CDS GCA 90 bp GTTCTTCCATTGGATGCTACCATCTCCAAGAGCATATCAAACTGCTaGCCTTCAGTTGTCTCACTATATGGAGCACAGAGGGCAAAGGTA +
Preference number: 5 (lower is better)
Translates to: VLPLDATISKSISNC*PSVVSLYGAQRAKV
Trigger: TACCTTTGCCCTCTGTGCTCCATATAGTGAGACAACTGAAGGGCAGCAGTTTGATATGCTCTTGGAGATGGTAGCATCCAATGGAAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000486798.5
ENST00000650455.1
CDS GCA 90 bp GCCACTAAGTTAGATCTTTACTGCGCAAACAGCTTTCAGGTGTGCTaGTTCTTTAGCCCTGTGACTACCCTAGCTCAGCAACTCATTTCT +
Preference number: 5 (lower is better)
Translates to: ATKLDLYCANSFQVC*FFSPVTTLAQQLIS
Trigger: AGAAATGAGTTGCTGAGCTAGGGTAGTCACAGGGCTAAAGAAGCAGCACACCTGAAAGCTGTTTGCGCAGTAAAGATCTAACTTAGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471925.1
CDS CCA 90 bp CTCCAAGAGCATATCAAACTGCTGCCCTTCAGTTGTCTCACTATATaGAGCACAGAGGGCAAAGGTAAGGAAGTCCAAGAGCGAACTAAT +
Preference number: 5 (lower is better)
Translates to: LQEHIKLLPFSCLTI*STEGKGKEVQERTN
Trigger: ATTAGTTCGCTCTTGGACTTCCTTACCTTTGCCCTCTGTGCTCCATATAGTGAGACAACTGAAGGGCAGCAGTTTGATATGCTCTTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000486798.5
ENST00000650455.1
CDS-3UTR CAA 90 bp CGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTAATTATGTTCATTTaGTGCTCAAACCTTCGCGGG +
Preference number: 5 (lower is better)
Translates to: RISWRNVDLALAFQRLLSLIMFI*CSNLRG
Trigger: CCCGCGAAGGTTTGAGCACAAAATGAACATAATTAG...AGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp ACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCCCCTCCATGAATGTTTaGTTGTGTAGAAACATGCCA +
Preference number: 5 (lower is better)
Translates to: TYQLEECGLGTGLSAFIVPSMNV*LCRNMP
Trigger: TGGCATGTTTCTACACAACAAAACATTCATGGAGGG...GACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp CTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAAGAACAGAGTACTCTGTaGGTTGCAGGATTAATTTGG +
Preference number: 5 (lower is better)
Translates to: LEECGLGTGLSAFIVSREEQSTL*VAGLIW
Trigger: CCAAATTAATCCTGCAACCAACAGAGTACTCTGTTC...TTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp TTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTCTAAAGGCTTCAATGTaGCAATATTATAGGTTGCCG +
Preference number: 5 (lower is better)
Translates to: LLQRISWRNVDLALAFQRLKASM*QYYRLP
Trigger: CGGCAACCTATAATATTGCAACATTGAAGCCTTTAG...ACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp CGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTGCATGGATTATTCCGTaGTTGCTTCTTTTGAGTGCT +
Preference number: 5 (lower is better)
Translates to: RISWRNVDLALAFQRLLSAWIIP*LLLLSA
Trigger: AGCACTCAAAAGAAGCAACAACGGAATAATCCATGC...AGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp ATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCCAGCTCCTTTTATTATaGCCATGGAAGGATGCTGAA +
Preference number: 5 (lower is better)
Translates to: ISWRNVDLALAFQRLLSLQLLLL*PWKDAE
Trigger: TTCAGCATCCTTCCATGGCAATAATAAAAGGAGCTG...GAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp CGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTTTCAATTACATTGCTTaGCAGTGGTACTGTAGCTCG +
Preference number: 5 (lower is better)
Translates to: RISWRNVDLALAFQRLLSFNYIA*QWYCSS
Trigger: CGAGCTACAGTACCACTGCAAAGCAATGTAATTGAA...AGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp ACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCGCAGCTTCAATTACATaGCTTTGCAGTGGTACTGTA +
Preference number: 5 (lower is better)
Translates to: TYQLEECGLGTGLSAFIVAASIT*LCSGTV
Trigger: TACAGTACCACTGCAAAGCAATGTAATTGAAGCTGC...GACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp TTCAGCCAAATACCCTCCAAGGCGACTCAGAGCATGGACACTCAGTTTGGCAAGGCATTTAACATTCCTTaGGTCCACAATTCTTGCATC +
Preference number: 5 (lower is better)
Translates to: FSQIPSKATQSMDTQFGKAFNIP*VHNSCI
Trigger: GATGCAAGAATTGTGGACCAAAGGAATGTTAAATGC...CTTGCCAAACTGAGTGTCCATGCTCTGAGTCGCCTTGGAGGGTATTTGGCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CAA 90 bp AGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCACTGATAAAGTGCTCTaGTGTTACTCTGAAGACGAG +
Preference number: 5 (lower is better)
Translates to: SKSLLQRISWRNVDLALATDKVL*CYSEDE
Trigger: CTCGTCTTCAGAGTAACACAAGAGCACTTTATCAGT...GGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp TGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATATCAGGGTGGTACTTTaGTGCAAGTCTGAAGTAAGC +
Preference number: 5 (lower is better)
Translates to: WRNVDLALAFQRLLSLVNIRVVL*CKSEVS
Trigger: GCTTACTTCAGACTTGCACAAAAGTACCACCCTGAT...ATTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp CTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAACTACCTCCTGCTGGTTaGTTTCTTCACTTTTCTGAA +
Preference number: 5 (lower is better)
Translates to: LEECGLGTGLSAFIVSRELPPAG*FLHFSE
Trigger: TTCAGAAAAGTGAAGAAACAAACCAGCAGGAGGTAG...TTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp TTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTTTGGAACCTCCAGTaGGAAAGTAGGAACTTCATT +
Preference number: 5 (lower is better)
Translates to: LLQRISWRNVDLALAFQRFWNLQ*ESRNFI
Trigger: AATGAAGTTCCTACTTTCCAACTGGAGGTTCCAAAA...ACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp TTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTTGCAGCAAATGCTTTaGGAACCTCCAGTTGGAAAG +
Preference number: 5 (lower is better)
Translates to: FNVSAGGMWTWHWPFSVYLQQML*EPPVGK
Trigger: CTTTCCAACTGGAGGTTCCAAAAGCATTTGCTGCAA...ATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp GCTTTCAGAAGGTTAATGATTGAGGATGCCAGTGAAGGGTGCAGGGACAAAACCGACTTAGCCCAATTTTaGTTGACTGTAGCTCAACCC +
Preference number: 5 (lower is better)
Translates to: AFRRLMIEDASEGCRDKTDLAQF*LTVAQP
Trigger: GGGTTGAGCTACAGTCAACAAAAATTGGGCTAAGTC...GGTTTTGTCCCTGCACCCTTCACTGGCATCCTCAATCATTAACCTTCTGAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS GCA 90 bp ATTGTTTCTCCCTCTGTACAAGCTGCCACTAAGTTAGATCTTTACTaGGCAAACAGCTTTCAGGTGTGCTGCTTCTTTAGCCCTGTGACT +
Preference number: 5 (lower is better)
Translates to: IVSPSVQAATKLDLY*ANSFQVCCFFSPVT
Trigger: AGTCACAGGGCTAAAGAAGCAGCACACCTGAAAGCTGTTTGCGCAGTAAAGATCTAACTTAGTGGCAGCTTGTACAGAGGGAGAAACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471925.1
CDS-3UTR CAA 90 bp TTCTTGCATCTCATGAAATCCATACGGGCCACTCCTTTCTTTGTCTGCGTTGCCCCCTCCATGAATGTTTaGTTGTGTAGAAACATGCCA +
Preference number: 5 (lower is better)
Translates to: FLHLMKSIRATPFFVCVAPSMNV*LCRNMP
Trigger: TGGCATGTTTCTACACAACAAAACATTCATGGAGGG...GGCAACGCAGACAAAGAAAGGAGTGGCCCGTATGGATTTCATGAGATGCAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CAA 90 bp GCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGTTGCAATATTATAGGTaGCCGGATCACGTTCTACTA +
Preference number: 5 (lower is better)
Translates to: AVRVCFNVSAGGMWTWHWLQYYR*PDHVLL
Trigger: TAGTAGAACGTGATCCGGCAACCTATAATATTGCAA...CCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp ACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCCTAAAGGCTTCAATGTaGCAATATTATAGGTTGCCG +
Preference number: 5 (lower is better)
Translates to: TYQLEECGLGTGLSAFIVLKASM*QYYRLP
Trigger: CGGCAACCTATAATATTGCAACATTGAAGCCTTTAG...GACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp AACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCCATCCAGCAAACTaGCTAATAAGGAATCTCTCT +
Preference number: 5 (lower is better)
Translates to: NVSAGGMWTWHWPFSVYCLHPAN*LIRNLS
Trigger: AGAGAGATTCCTTATTAGCAAGTTTGCTGGATGGAG...ACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp ACCAGGAGAAAGGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGCCGTTGTTGCTTCTTTaGAGTGCTTTTACTACCTTC +
Preference number: 5 (lower is better)
Translates to: TRRKAVRVCFNVSAGGMWPLLLL*SAFTTF
Trigger: GAAGGTAGTAAAAGCACTCAAAAGAAGCAACAACGG...CCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTTCTCCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp TGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTGGATTATTCCGTTGTaGCTTCTTTTGAGTGCTTTT +
Preference number: 5 (lower is better)
Translates to: CFNVSAGGMWTWHWPFSVWIIPL*LLLSAF
Trigger: AAAAGCACTCAAAAGAAGCAACAACGGAATAATCCA...AACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp GGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGTTTCCAGAAACTTCTTaGACGAGAGAAGAGAAGCTT +
Preference number: 5 (lower is better)
Translates to: GSKSLLQRISWRNVDLALFPETS*TREEKL
Trigger: AAGCTTCTCTTCTCTCGTCAAAGAAGTTTCTGGAAA...CAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp CATGAAACCAGGAGAAAGGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAAAAAGGGTTCTTCCATaGGATGCTACCATCTCCAAG +
Preference number: 5 (lower is better)
Translates to: HETRRKAVRVCFNVSAGGKRVLP*DATISK
Trigger: CTTGGAGATGGTAGCATCCAATGGAAGAACCCTTTT...TCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTTCTCCTGGTTTCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp TTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATACAAGTTTGTTGCAGTaGCATTATCAGCTGTCCAGA +
Preference number: 5 (lower is better)
Translates to: FNVSAGGMWTWHWPFSVYTSLLQ*HYQLSR
Trigger: TCTGGACAGCTGATAATGCAACTGCAACAAACTTGT...ATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp ACCAGGAGAAAGGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGACAAGTTTGTTGCAGTaGCATTATCAGCTGTCCAGA +
Preference number: 5 (lower is better)
Translates to: TRRKAVRVCFNVSAGGMWTSLLQ*HYQLSR
Trigger: TCTGGACAGCTGATAATGCAACTGCAACAAACTTGT...CCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTTCTCCTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp AGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTGCGTTTCAACAAGTTaGTTGCAGTTGCATTATCAG +
Preference number: 5 (lower is better)
Translates to: SKSLLQRISWRNVDLALACVSTS*LQLHYQ
Trigger: CTGATAATGCAACTGCAACAAACTTGTTGAAACGCA...GGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp ACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCCTTTCTTTGTCTGCGTaGCCAAAATACCATTCCTTT +
Preference number: 5 (lower is better)
Translates to: TYQLEECGLGTGLSAFIVLSLSA*PKYHSF
Trigger: AAAGGAATGGTATTTTGGCAACGCAGACAAAGAAAG...GACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp AGTGACTTAGCCCAATTTTTGTTGACTGTAGCTCAACCCTACAGTCATGCTAGTGGGCCACTCCTTTCTTaGTCTGCGTTGCCAAAATAC +
Preference number: 5 (lower is better)
Translates to: SDLAQFLLTVAQPYSHASGPLLS*SALPKY
Trigger: GTATTTTGGCAACGCAGACAAAGAAAGGAGTGGCCC...ACTAGCATGACTGTAGGGTTGAGCTACAGTCAACAAAAATTGGGCTAAGTCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp ACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCGCATTTAACATTCCTTaGGTCCACAATTCTTGCATC +
Preference number: 5 (lower is better)
Translates to: TYQLEECGLGTGLSAFIVAFNIP*VHNSCI
Trigger: GATGCAAGAATTGTGGACCAAAGGAATGTTAAATGC...GACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp AACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCCCAGCATCTGGTTTTaGCATTTAACATTCCTTTGG +
Preference number: 5 (lower is better)
Translates to: NVSAGGMWTWHWPFSVYCPSIWF*HLTFLW
Trigger: CCAAAGGAATGTTAAATGCAAAAACCAGATGCTGGG...ACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp CGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTAATGATGGCATTGTCTaGATCCCTGCTTGGAAAATA +
Preference number: 5 (lower is better)
Translates to: RISWRNVDLALAFQRLLSNDGIV*IPAWKI
Trigger: TATTTTCCAAGCAGGGATCAAGACAATGCCATCATT...AGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260818.11
CDS-3UTR CAA 90 bp CATCTCATGAAATCCATACGGGCCACTCCTTTCTTTGTCTGCGTTGCCAAAATAGCAACAGGAAGCACATaGGAACCTGTGTACATCATG +
Preference number: 5 (lower is better)
Translates to: HLMKSIRATPFFVCVAKIATGST*EPVYIM
Trigger: CATGATGTACACAGGTTCCAATGTGCTTCCTGTTGC...TATTTTGGCAACGCAGACAAAGAAAGGAGTGGCCCGTATGGATTTCATGAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CAA 90 bp ACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTTTCACTGCTCCAGATaGCTTCTGGAGTATCAAATT +
Preference number: 5 (lower is better)
Translates to: TYQLEECGLGTGLSAFIVFHCSR*LLEYQI
Trigger: AATTTGATACTCCAGAAGCAATCTGGAGCAGTGAAA...GACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp TGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATACTGATAAAGTGCTCTaGTGTTACTCTGAAGACGAG +
Preference number: 5 (lower is better)
Translates to: WRNVDLALAFQRLLSLVNTDKVL*CYSEDE
Trigger: CTCGTCTTCAGAGTAACACAAGAGCACTTTATCAGT...ATTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp AGTGACTTAGCCCAATTTTTGTTGACTGTAGCTCAACCCTACAGTCATGCTAGTCTGAGCTCTTCAGCATaGAGGGCTGAACAGTTGACA +
Preference number: 5 (lower is better)
Translates to: SDLAQFLLTVAQPYSHASLSSSA*RAEQLT
Trigger: TGTCAACTGTTCAGCCCTCAATGCTGAAGAGCTCAG...ACTAGCATGACTGTAGGGTTGAGCTACAGTCAACAAAAATTGGGCTAAGTCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp TGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATGAACAAGCTGACGACTaGATGGCAATGAATGTAGAA +
Preference number: 5 (lower is better)
Translates to: WRNVDLALAFQRLLSLVNEQADD*MAMNVE
Trigger: TTCTACATTCATTGCCATCAAGTCGTCAGCTTGTTC...ATTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp AGTGACTTAGCCCAATTTTTGTTGACTGTAGCTCAACCCTACAGTCATGCTAGTATTGCCTGGATAACTTaGGGAAGATGGCCCAATGGC +
Preference number: 5 (lower is better)
Translates to: SDLAQFLLTVAQPYSHASIAWIT*GRWPNG
Trigger: GCCATTGGGCCATCTTCCCAAAGTTATCCAGGCAAT...ACTAGCATGACTGTAGGGTTGAGCTACAGTCAACAAAAATTGGGCTAAGTCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp GCTTTCAGAAGGTTAATGATTGAGGATGCCAGTGAAGGGTGCAGGGACAAAACCTTAGCCCAATTTTTGTaGACTGTAGCTCAACCCTAC +
Preference number: 5 (lower is better)
Translates to: AFRRLMIEDASEGCRDKTLAQFL*TVAQPY
Trigger: GTAGGGTTGAGCTACAGTCAACAAAAATTGGGCTAA...GGTTTTGTCCCTGCACCCTTCACTGGCATCCTCAATCATTAACCTTCTGAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp CACAGGCTAGACCAACAGTATCTGCTCGCTTTTTCATTCCATTCATCAGTGGGCTTAGCCCAATTTTTGTaGACTGTAGCTCAACCCTAC +
Preference number: 5 (lower is better)
Translates to: HRLDQQYLLAFSFHSSVGLAQFL*TVAQPY
Trigger: GTAGGGTTGAGCTACAGTCAACAAAAATTGGGCTAA...GCCCACTGATGAATGGAATGAAAAAGCGAGCAGATACTGTTGGTCTAGCCTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CAA 90 bp CTTTCAGCGTTTATTGTCTCTCGTGAATATTTCAAGTCTGATAGCCAAGGTCGCGGTTGCAGGATTAATTaGGTCAAAGCCTCCTGGAGT +
Preference number: 5 (lower is better)
Translates to: LSAFIVSREYFKSDSQGRGCRIN*VKASWS
Trigger: ACTCCAGGAGGCTTTGACCAAATTAATCCTGCAACC...GCGACCTTGGCTATCAGACTTGAAATATTCACGAGAGACAATAAACGCTGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CAA 90 bp CATGAAACCAGGAGAAAGGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAGCATGGATTATTCCGTaGTTGCTTCTTTTGAGTGCT +
Preference number: 5 (lower is better)
Translates to: HETRRKAVRVCFNVSAGGAWIIP*LLLLSA
Trigger: AGCACTCAAAAGAAGCAACAACGGAATAATCCATGC...TCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTTCTCCTGGTTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp GCTTTCAGAAGGTTAATGATTGAGGATGCCAGTGAAGGGTGCAGGGACAAAACCTGCGTTTCAACAAGTTaGTTGCAGTTGCATTATCAG +
Preference number: 5 (lower is better)
Translates to: AFRRLMIEDASEGCRDKTCVSTS*LQLHYQ
Trigger: CTGATAATGCAACTGCAACAAACTTGTTGAAACGCA...GGTTTTGTCCCTGCACCCTTCACTGGCATCCTCAATCATTAACCTTCTGAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp ACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCATTGCTATTTTCACATaGTCTCTAACATGCATCCGA +
Preference number: 5 (lower is better)
Translates to: TYQLEECGLGTGLSAFIVIAIFT*SLTCIR
Trigger: TCGGATGCATGTTAGAGACAATGTGAAAATAGCAAT...GACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp GGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGATTGCTATTTTCACATaGTCTCTAACATGCATCCGA +
Preference number: 5 (lower is better)
Translates to: GSKSLLQRISWRNVDLALIAIFT*SLTCIR
Trigger: TCGGATGCATGTTAGAGACAATGTGAAAATAGCAAT...CAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp ATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCTTCCATACTGATCCATaGCTATTTTCACATTGTCTC +
Preference number: 5 (lower is better)
Translates to: ISWRNVDLALAFQRLLSLFHTDP*LFSHCL
Trigger: GAGACAATGTGAAAATAGCAATGGATCAGTATGGAA...GAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp TGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATCTTTCTTTGTCTGCGTaGCCAAAATACCATTCCTTT +
Preference number: 5 (lower is better)
Translates to: WRNVDLALAFQRLLSLVNLSLSA*PKYHSF
Trigger: AAAGGAATGGTATTTTGGCAACGCAGACAAAGAAAG...ATTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp CGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTGACTTGAAAGCCTGTTaGGTATGTGTGTATTTCAAA +
Preference number: 5 (lower is better)
Translates to: RISWRNVDLALAFQRLLSDLKAC*VCVYFK
Trigger: TTTGAAATACACACATACCAAACAGGCTTTCAAGTC...AGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp GCTTTCAGAAGGTTAATGATTGAGGATGCCAGTGAAGGGTGCAGGGACAAAACCTTTGTCTCTTCTGACTaGAAAGCCTGTTTGGTATGT +
Preference number: 5 (lower is better)
Translates to: AFRRLMIEDASEGCRDKTFVSSD*KACLVC
Trigger: ACATACCAAACAGGCTTTCAAGTCAGAAGAGACAAA...GGTTTTGTCCCTGCACCCTTCACTGGCATCCTCAATCATTAACCTTCTGAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp GCTTTCAGAAGGTTAATGATTGAGGATGCCAGTGAAGGGTGCAGGGACAAAACCACAATGGTGATTCTTTaGAGAAAAGGAGGTCATCTG +
Preference number: 5 (lower is better)
Translates to: AFRRLMIEDASEGCRDKTTMVIL*RKGGHL
Trigger: CAGATGACCTCCTTTTCTCAAAAGAATCACCATTGT...GGTTTTGTCCCTGCACCCTTCACTGGCATCCTCAATCATTAACCTTCTGAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp CACAGGCTAGACCAACAGTATCTGCTCGCTTTTTCATTCCATTCATCAGTGGGCTTTTGGAACCTCCAGTaGGAAAGTAGGAACTTCATT +
Preference number: 5 (lower is better)
Translates to: HRLDQQYLLAFSFHSSVGFWNLQ*ESRNFI
Trigger: AATGAAGTTCCTACTTTCCAACTGGAGGTTCCAAAA...GCCCACTGATGAATGGAATGAAAAAGCGAGCAGATACTGTTGGTCTAGCCTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CAA 90 bp GGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGTATAATCCAAGAGACTaGCAGCAAATGCTTTTGGAA +
Preference number: 5 (lower is better)
Translates to: GSKSLLQRISWRNVDLALYNPRD*QQMLLE
Trigger: TTCCAAAAGCATTTGCTGCAAGTCTCTTGGATTATA...CAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp ACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTATAATCCAAGAGACTaGCAGCAAATGCTTTTGGAA +
Preference number: 5 (lower is better)
Translates to: TYQLEECGLGTGLSAFIVYNPRD*QQMLLE
Trigger: TTCCAAAAGCATTTGCTGCAAGTCTCTTGGATTATA...GACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp CTTTCAGCGTTTATTGTCTCTCGTGAATATTTCAAGTCTGATAGCCAAGGTCGCGAATGTGTGCAAGTATaGGGCCTGCGAGCCTATATA +
Preference number: 5 (lower is better)
Translates to: LSAFIVSREYFKSDSQGRECVQV*GLRAYI
Trigger: TATATAGGCTCGCAGGCCCAATACTTGCACACATTC...GCGACCTTGGCTATCAGACTTGAAATATTCACGAGAGACAATAAACGCTGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CAA 90 bp GGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGATTCAGCAATATTGTaGACACAGTCTTGGTTAGAT +
Preference number: 5 (lower is better)
Translates to: GSKSLLQRISWRNVDLALDSAIL*TQSWLD
Trigger: ATCTAACCAAGACTGTGTCAACAATATTGCTGAATC...CAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp GTGCTATCTGACAGCAGTCTTTTCACTTTGGGTAGAGGCCGAATGATGGCATTGAAAACAGTACCCTGCTaGGAAAATATCCACACATTG +
Preference number: 5 (lower is better)
Translates to: VLSDSSLFTLGRGRMMALKTVPC*ENIHTL
Trigger: CAATGTGTGGATATTTTCCAAGCAGGGTACTGTTTT...CAATGCCATCATTCGGCCTCTACCCAAAGTGAAAAGACTGCTGTCAGATAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000506813.1
ENST00000650455.1
CDS TCA 90 bp CTCTCTACTTCCTCATCAACAGGCATGCTGAGTAACCCCCATCGCTaGCCTTTATGGGTTGGTGTCATTTTTACACAAACATCTCTATTA +
Preference number: 5 (lower is better)
Translates to: LSTSSSTGMLSNPHR*PLWVGVIFTQTSLL
Trigger: TAATAGAGATGTTTGTGTAAAAATGACACCAACCCATAAAGGTCAGCGATGGGGGTTACTCAGCATGCCTGTTGATGAGGAAGTAGAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000486798.5
ENST00000650455.1
CDS GCA 90 bp GTATGCAAGTGTCGAGGTAAGGCACCTTCACTTAGGGCAAGCTCCTaGATTTTTGTAGCAATTTCTTTATCACCTTCCTCTATTATTGCC +
Preference number: 5 (lower is better)
Translates to: VCKCRGKAPSLRASS*IFVAISLSPSSIIA
Trigger: GGCAATAATAGAGGAAGGTGATAAAGAAATTGCTACAAAAATGCAGGAGCTTGCCCTAAGTGAAGGTGCCTTACCTCGACACTTGCATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000486798.5
ENST00000650455.1
CDS-3UTR CAA 90 bp GGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATATTTCAAGTCTCTCCATCCAGCAAACTaGCTAATAAGGAATCTCTCT +
Preference number: 5 (lower is better)
Translates to: GLGTGLSAFIVSREYFKSLHPAN*LIRNLS
Trigger: AGAGAGATTCCTTATTAGCAAGTTTGCTGGATGGAG...AGACTTGAAATATTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CAA 90 bp CTATCTGACAGCAGTCTTTTCACTTTGGGTAGAGGCCGAATGATGGCATTGTCTTTTCCAGAAACTTCTTaGACGAGAGAAGAGAAGCTT +
Preference number: 5 (lower is better)
Translates to: LSDSSLFTLGRGRMMALSFPETS*TREEKL
Trigger: AAGCTTCTCTTCTCTCGTCAAAGAAGTTTCTGGAAA...AGACAATGCCATCATTCGGCCTCTACCCAAAGTGAAAAGACTGCTGTCAGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CAA 90 bp TTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATGCCCATCCACTATTTTaGCTGATTTGGTACATAAAA +
Preference number: 5 (lower is better)
Translates to: FNVSAGGMWTWHWPFSVYAHPLF*LIWYIK
Trigger: TTTTATGTACCAAATCAGCAAAAATAGTGGATGGGC...ATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp AACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTTATGGACTTTCTGTGTaGCTGTTAAGCATCTTCAAA +
Preference number: 5 (lower is better)
Translates to: NVSAGGMWTWHWPFSVYCYGLSV*LLSIFK
Trigger: TTTGAAGATGCTTAACAGCAACACAGAAAGTCCATA...ACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp TTCAACGTATCAGCTGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATCTCTCAGAACCTGGATaGTATTTTATGACATTTCTC +
Preference number: 5 (lower is better)
Translates to: FNVSAGGMWTWHWPFSVYLSEPG*YFMTFL
Trigger: GAGAAATGTCATAAAATACAATCCAGGTTCTGAGAG...ATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCAGCTGATACGTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp ACCAGGAGAAAGGCAGTAAGAGTTTGCTTCAACGTATCAGCTGGAGGAATGTGGCTCTCAGAACCTGGATaGTATTTTATGACATTTCTC +
Preference number: 5 (lower is better)
Translates to: TRRKAVRVCFNVSAGGMWLSEPG*YFMTFL
Trigger: GAGAAATGTCATAAAATACAATCCAGGTTCTGAGAG...CCACATTCCTCCAGCTGATACGTTGAAGCAAACTCTTACTGCCTTTCTCCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp TGGAGGAATGTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATGATTCAGCAATATTGTaGACACAGTCTTGGTTAGAT +
Preference number: 5 (lower is better)
Translates to: WRNVDLALAFQRLLSLVNDSAIL*TQSWLD
Trigger: ATCTAACCAAGACTGTGTCAACAATATTGCTGAATC...ATTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCACATTCCTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp CATCTCATGAAATCCATACGGGCCACTCCTTTCTTTGTCTGCGTTGCCAAAATAGAACAAGCTGACGACTaGATGGCAATGAATGTAGAA +
Preference number: 5 (lower is better)
Translates to: HLMKSIRATPFFVCVAKIEQADD*MAMNVE
Trigger: TTCTACATTCATTGCCATCAAGTCGTCAGCTTGTTC...TATTTTGGCAACGCAGACAAAGAAAGGAGTGGCCCGTATGGATTTCATGAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS TCA 90 bp CATTATCAGCTGTCCAGAGTCCCACTAAATGTCTACTTAGCTGTCTaGAAAAAGCAGACGTTGAGAAAGGTTTGCTGCTTTATCTCAGCT +
Preference number: 5 (lower is better)
Translates to: HYQLSRVPLNVYLAV*KKQTLRKVCCFISA
Trigger: AGCTGAGATAAAGCAGCAAACCTTTCTCAACGTCTGCTTTTTTCAGACAGCTAAGTAGACATTTAGTGGGACTCTGGACAGCTGATAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS GCA 90 bp CATGGAAGGATGCTGAAAAAGTTTAAAAAGGGTTCTTCCATTGGATaGTACCATCTCCAAGAGCATATCAAACTGCTGCCCTTCAGTTGT +
Preference number: 5 (lower is better)
Translates to: HGRMLKKFKKGSSIG*YHLQEHIKLLPFSC
Trigger: ACAACTGAAGGGCAGCAGTTTGATATGCTCTTGGAGATGGTAGCATCCAATGGAAGAACCCTTTTTAAACTTTTTCAGCATCCTTCCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000486798.5
ENST00000650455.1
CDS-3UTR CAA 90 bp GTTGCATTATCAGCTGTCCAGAGTCCCACTAAATGTCTACTTAGCTGTCTGAAACTAATTATGTTCATTTaGTGCTCAAACCTTCGCGGG +
Preference number: 5 (lower is better)
Translates to: VALSAVQSPTKCLLSCLKLIMFI*CSNLRG
Trigger: CCCGCGAAGGTTTGAGCACAAAATGAACATAATTAG...TTTCAGACAGCTAAGTAGACATTTAGTGGGACTCTGGACAGCTGATAATGCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CAA 90 bp GAAAATATCAACTTAAAGTGCCCAATGCATTCACTCTCAGAACCTGGATTGTATACTGCTGCCCTTCAGTaGTCTCACTATATGGAGCAC +
Preference number: 5 (lower is better)
Translates to: ENINLKCPMHSLSEPGLYTAALQ*SHYMEH
Trigger: GTGCTCCATATAGTGAGACAACTGAAGGGCAGCAGT...ATACAATCCAGGTTCTGAGAGTGAATGCATTGGGCACTTTAAGTTGATATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CAA 90 bp GCTTCACAGGCTAGACCAACAGTATCTGCTCGCTTTTTCATTCCATTCATCAGTGTTTCAACAAGTTTGTaGCAGTTGCATTATCAGCTG +
Preference number: 5 (lower is better)
Translates to: ASQARPTVSARFFIPFISVSTSL*QLHYQL
Trigger: CAGCTGATAATGCAACTGCAACAAACTTGTTGAAAC...ACTGATGAATGGAATGAAAAAGCGAGCAGATACTGTTGGTCTAGCCTGTGAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CAA 90 bp GGGTTATCTTGCATGATATGGTATAACAAAATAGCAACCTTCTCAACAAGGATACCATCCATCCATGCCTaGAGCCCAGCATCTGGTTTT +
Preference number: 5 (lower is better)
Translates to: GLSCMIWYNKIATFSTRIPSIHA*SPASGF
Trigger: AAAACCAGATGCTGGGCTCAAGGCATGGATGGATGG...TATCCTTGTTGAGAAGGTTGCTATTTTGTTATACCATATCATGCAAGATAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506813.1
ENST00000650455.1
CDS-3UTR CAA 90 bp CATCTCATGAAATCCATACGGGCCACTCCTTTCTTTGTCTGCGTTGCCAAAATATTTGTCTCTTCTGACTaGAAAGCCTGTTTGGTATGT +
Preference number: 5 (lower is better)
Translates to: HLMKSIRATPFFVCVAKIFVSSD*KACLVC
Trigger: ACATACCAAACAGGCTTTCAAGTCAGAAGAGACAAA...TATTTTGGCAACGCAGACAAAGAAAGGAGTGGCCCGTATGGATTTCATGAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CAA 90 bp TTCCATTGTTATAGTCCGAATAAGCATGGGGTATCCTGCATATTTATAAGGCTGACAGCAGCTTCAGGATaGTCTCTCATAGCATCCATG +
Preference number: 5 (lower is better)
Translates to: FHCYSPNKHGVSCIFIRLTAASG*SLIASM
Trigger: CATGGATGCTATGAGAGACAATCCTGAAGCTGCTGT...CAGCCTTATAAATATGCAGGATACCCCATGCTTATTCGGACTATAACAATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CAA 90 bp GGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATATTTCAAGTCTGCCTTTCAGCGTTTATaGTCTCTCGTGAATATTTCA +
Preference number: 5 (lower is better)
Translates to: GLGTGLSAFIVSREYFKSAFQRL*SLVNIS
Trigger: TGAAATATTCACGAGAGACAATAAACGCTGAAAGGC...AGACTTGAAATATTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509279.1
ENST00000650455.1
CDS-3UTR CAA 90 bp AGTGACTTAGCCCAATTTTTGTTGACTGTAGCTCAACCCTACAGTCATGCTAGTAAATTACAGGTTTTCTaGAGTCACTCCAGTGATGCT +
Preference number: 5 (lower is better)
Translates to: SDLAQFLLTVAQPYSHASKLQVF*SHSSDA
Trigger: AGCATCACTGGAGTGACTCAAGAAAACCTGTAATTT...ACTAGCATGACTGTAGGGTTGAGCTACAGTCAACAAAAATTGGGCTAAGTCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp GGCAAAATGCGTTTCAACAAGTTTGTTGCAGTTGCATTATCAGCTGTCCAGAGTTTGCAATATTATAGGTaGCCGGATCACGTTCTACTA +
Preference number: 5 (lower is better)
Translates to: GKMRFNKFVAVALSAVQSLQYYR*PDHVLL
Trigger: TAGTAGAACGTGATCCGGCAACCTATAATATTGCAA...ACTCTGGACAGCTGATAATGCAACTGCAACAAACTTGTTGAAACGCATTTTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CAA 90 bp GTGGACTTGGCACTGGCCTTTCAGCGTTTATTGTCTCTCGTGAATATTTCAAGTTGGATTATTCCGTTGTaGCTTCTTTTGAGTGCTTTT +
Preference number: 5 (lower is better)
Translates to: VDLALAFQRLLSLVNISSWIIPL*LLLSAF
Trigger: AAAAGCACTCAAAAGAAGCAACAACGGAATAATCCA...ACTTGAAATATTCACGAGAGACAATAAACGCTGAAAGGCCAGTGCCAAGTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CAA 90 bp AGTGACTTAGCCCAATTTTTGTTGACTGTAGCTCAACCCTACAGTCATGCTAGTGTTTCAACAAGTTTGTaGCAGTTGCATTATCAGCTG +
Preference number: 5 (lower is better)
Translates to: SDLAQFLLTVAQPYSHASVSTSL*QLHYQL
Trigger: CAGCTGATAATGCAACTGCAACAAACTTGTTGAAAC...ACTAGCATGACTGTAGGGTTGAGCTACAGTCAACAAAAATTGGGCTAAGTCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS-3UTR CAA 90 bp TATAACAAAATAGCAACCTTCTCAACAAGGATAGGGTCAAAGGTCAGCAGTAGCGCAGCTTCAATTACATaGCTTTGCAGTGGTACTGTA +
Preference number: 5 (lower is better)
Translates to: YNKIATFSTRIGSKVSSSAASIT*LCSGTV
Trigger: TACAGTACCACTGCAAAGCAATGTAATTGAAGCTGC...GCTACTGCTGACCTTTGACCCTATCCTTGTTGAGAAGGTTGCTATTTTGTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506813.1
ENST00000650455.1
CDS-3UTR CAA 90 bp TGTGGGTTATCTTGCATGATATGGTATAACAAAATAGCAACCTTCTCAACAAGGAGCAGTCTTTTCACTTaGGGTAGAGGCCGAATGATG +
Preference number: 5 (lower is better)
Translates to: CGLSCMIWYNKIATFSTRSSLFT*GRGRMM
Trigger: CATCATTCGGCCTCTACCCAAAGTGAAAAGACTGCT...CCTTGTTGAGAAGGTTGCTATTTTGTTATACCATATCATGCAAGATAACCCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506813.1
ENST00000650455.1
CDS-3UTR CAA 90 bp TTCCATTGTTATAGTCCGAATAAGCATGGGGTATCCTGCATATTTATAAGGCTGTTGCAGCAAATGCTTTaGGAACCTCCAGTTGGAAAG +
Preference number: 5 (lower is better)
Translates to: FHCYSPNKHGVSCIFIRLLQQML*EPPVGK
Trigger: CTTTCCAACTGGAGGTTCCAAAAGCATTTGCTGCAA...CAGCCTTATAAATATGCAGGATACCCCATGCTTATTCGGACTATAACAATGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CAA 90 bp TGTGGGTTATCTTGCATGATATGGTATAACAAAATAGCAACCTTCTCAACAAGGAAAAAGTTCTGCTGTTaGGGCTCGAACCTGTGGATG +
Preference number: 5 (lower is better)
Translates to: CGLSCMIWYNKIATFSTRKKFCC*GSNLWM
Trigger: CATCCACAGGTTCGAGCCCAAACAGCAGAACTTTTT...CCTTGTTGAGAAGGTTGCTATTTTGTTATACCATATCATGCAAGATAACCCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CAA 90 bp TCTTTTAGAAGCTTAACCGGGTCTTTAATTGGCCAATCTGGAAACCGGAGTGTAGCCTTTCAGCGTTTATaGTCTCTCGTGAATATTTCA +
Preference number: 5 (lower is better)
Translates to: SFRSLTGSLIGQSGNRSVAFQRL*SLVNIS
Trigger: TGAAATATTCACGAGAGACAATAAACGCTGAAAGGC...TACACTCCGGTTTCCAGATTGGCCAATTAAAGACCCGGTTAAGCTTCTAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CAA 90 bp TGTGGGTTATCTTGCATGATATGGTATAACAAAATAGCAACCTTCTCAACAAGGTTACGAAATGTGAGGTaGAACTCCGTTCCTTGTCCT +
Preference number: 5 (lower is better)
Translates to: CGLSCMIWYNKIATFSTRLRNVR*NSVPCP
Trigger: AGGACAAGGAACGGAGTTCAACCTCACATTTCGTAA...CCTTGTTGAGAAGGTTGCTATTTTGTTATACCATATCATGCAAGATAACCCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CAA 90 bp TATAACAAAATAGCAACCTTCTCAACAAGGATAGGGTCAAAGGTCAGCAGTAGCCTTTCTTTGTCTGCGTaGCCAAAATACCATTCCTTT +
Preference number: 5 (lower is better)
Translates to: YNKIATFSTRIGSKVSSSLSLSA*PKYHSF
Trigger: AAAGGAATGGTATTTTGGCAACGCAGACAAAGAAAG...GCTACTGCTGACCTTTGACCCTATCCTTGTTGAGAAGGTTGCTATTTTGTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506813.1
ENST00000650455.1
CDS-3UTR CAA 90 bp AGTGACTTAGCCCAATTTTTGTTGACTGTAGCTCAACCCTACAGTCATGCTAGTTATGGACTTTCTGTGTaGCTGTTAAGCATCTTCAAA +
Preference number: 5 (lower is better)
Translates to: SDLAQFLLTVAQPYSHASYGLSV*LLSIFK
Trigger: TTTGAAGATGCTTAACAGCAACACAGAAAGTCCATA...ACTAGCATGACTGTAGGGTTGAGCTACAGTCAACAAAAATTGGGCTAAGTCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000650455.1
CDS TCA 90 bp CAAAGCGAAGATTCAAATATTGCTCGAATTCTAAAGGCTCTTTCCTaGTCCGCAATGAAATACCTATGTAGTTACCAGCATGGTCTATTG +
Preference number: 5 (lower is better)
Translates to: QSEDSNIARILKALS*SAMKYLCSYQHGLL
Trigger: CAATAGACCATGCTGGTAACTACATAGGTATTTCATTGCGGATCAGGAAAGAGCCTTTAGAATTCGAGCAATATTTGAATCTTCGCTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000486798.5
ENST00000650455.1
CDS-3UTR CAA 90 bp TGTGGGTTATCTTGCATGATATGGTATAACAAAATAGCAACCTTCTCAACAAGGTTCAATTACATTGCTTaGCAGTGGTACTGTAGCTCG +
Preference number: 5 (lower is better)
Translates to: CGLSCMIWYNKIATFSTRFNYIA*QWYCSS
Trigger: CGAGCTACAGTACCACTGCAAAGCAATGTAATTGAA...CCTTGTTGAGAAGGTTGCTATTTTGTTATACCATATCATGCAAGATAACCCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506813.1
ENST00000650455.1
CDS-3UTR CAA 90 bp TGTGGGTTATCTTGCATGATATGGTATAACAAAATAGCAACCTTCTCAACAAGGCCCAGCATCTGGTTTTaGCATTTAACATTCCTTTGG +
Preference number: 5 (lower is better)
Translates to: CGLSCMIWYNKIATFSTRPSIWF*HLTFLW
Trigger: CCAAAGGAATGTTAAATGCAAAAACCAGATGCTGGG...CCTTGTTGAGAAGGTTGCTATTTTGTTATACCATATCATGCAAGATAACCCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506813.1
ENST00000650455.1
CDS-3UTR CAA 90 bp TTCCATTGTTATAGTCCGAATAAGCATGGGGTATCCTGCATATTTATAAGGCTGTTTCACTGCTCCAGATaGCTTCTGGAGTATCAAATT +
Preference number: 5 (lower is better)
Translates to: FHCYSPNKHGVSCIFIRLFHCSR*LLEYQI
Trigger: AATTTGATACTCCAGAAGCAATCTGGAGCAGTGAAA...CAGCCTTATAAATATGCAGGATACCCCATGCTTATTCGGACTATAACAATGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CAA 90 bp TGGTATAACAAAATAGCAACCTTCTCAACAAGGATAGGGTCAAAGGTCAGCAGTGCCCATCCACTATTTTaGCTGATTTGGTACATAAAA +
Preference number: 5 (lower is better)
Translates to: WYNKIATFSTRIGSKVSSAHPLF*LIWYIK
Trigger: TTTTATGTACCAAATCAGCAAAAATAGTGGATGGGC...ACTGCTGACCTTTGACCCTATCCTTGTTGAGAAGGTTGCTATTTTGTTATACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CAA 90 bp TTCCATTGTTATAGTCCGAATAAGCATGGGGTATCCTGCATATTTATAAGGCTGAAAACAGTACCCTGCTaGGAAAATATCCACACATTG +
Preference number: 5 (lower is better)
Translates to: FHCYSPNKHGVSCIFIRLKTVPC*ENIHTL
Trigger: CAATGTGTGGATATTTTCCAAGCAGGGTACTGTTTT...CAGCCTTATAAATATGCAGGATACCCCATGCTTATTCGGACTATAACAATGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS TCA 90 bp AGTATCTTTCAGTTCTTCTCGTGTTTTGAAATTCCAAATAAGGTTTaGCCTGGCATGGTCTTGACCAAACCTATAATCCAAGCTACTTGT +
Preference number: 5 (lower is better)
Translates to: SIFQFFSCFEIPNKV*PGMVLTKPIIQATC
Trigger: ACAAGTAGCTTGGATTATAGGTTTGGTCAAGACCATGCCAGGTCAAACCTTATTTGGAATTTCAAAACACGAGAAGAACTGAAAGATACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464766.1
CDS GCA 90 bp TCCTTCAATATTTCTATAGTCATAGGAACAGAGTACTCTGTTGGTTaGAGGATTAATTTGGTCAAAGCCTCCTGGAGTTACTTCCAAAAT +
Preference number: 5 (lower is better)
Translates to: SFNISIVIGTEYSVG*RINLVKASWSYFQN
Trigger: ATTTTGGAAGTAACTCCAGGAGGCTTTGACCAAATTAATCCTGCAACCAACAGAGTACTCTGTTCCTATGACTATAGAAATATTGAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000486798.5
ENST00000650455.1
CDS GCA 90 bp ATGGATTCATCAGTGCTGTATTTTCCAAAGCGAAGATTCAAATATTaGTCGAATTCTAAAGGCTCTTTCCTGATCCGCAATGAAATACCT +
Preference number: 5 (lower is better)
Translates to: MDSSVLYFPKRRFKY*SNSKGSFLIRNEIP
Trigger: AGGTATTTCATTGCGGATCAGGAAAGAGCCTTTAGAATTCGAGCAATATTTGAATCTTCGCTTTGGAAAATACAGCACTGATGAATCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000486798.5
ENST00000650455.1
CDS CCA 90 bp TGTATCAACTATGCAACAACTCCTTTCCATGGGCTAATCTTGCTGTaGTTTCCAAAATTCCATCTGTATACATACTTGATGGCAATGAAT +
Preference number: 5 (lower is better)
Translates to: CINYATTPFHGLILL*FPKFHLYTYLMAMN
Trigger: ATTCATTGCCATCAAGTATGTATACAGATGGAATTTTGGAAACCACAGCAAGATTAGCCCATGGAAAGGAGTTGTTGCATAGTTGATACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513822.1
CDS-3UTR CAA 90 bp CCATATCAAATATGGACTTTCTGTGTTGCTGTTAAGCATCTTCAAAATCTCAGTGAACAGAGTACTCTGTaGGTTGCAGGATTAATTTGG +
Preference number: 5 (lower is better)
Translates to: PYQIWTFCVAVKHLQNLSEQSTL*VAGLIW
Trigger: CCAAATTAATCCTGCAACCAACAGAGTACTCTGTTC...ACTGAGATTTTGAAGATGCTTAACAGCAACACAGAAAGTCCATATTTGATATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CAA 90 bp CCATATCAAATATGGACTTTCTGTGTTGCTGTTAAGCATCTTCAAAATCTCAGTCAGCTCCTTTTATTATaGCCATGGAAGGATGCTGAA +
Preference number: 5 (lower is better)
Translates to: PYQIWTFCVAVKHLQNLSQLLLL*PWKDAE
Trigger: TTCAGCATCCTTCCATGGCAATAATAAAAGGAGCTG...ACTGAGATTTTGAAGATGCTTAACAGCAACACAGAAAGTCCATATTTGATATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CAA 90 bp AAGGATCAACTTGTTAAGGAAGAGAATCAACCTATCTCGTTCAAGTTTATCTGTGAACCTGTGGATGTGTaGAATTGCAGAACATATCCA +
Preference number: 5 (lower is better)
Translates to: KDQLVKEENQPISFKFICEPVDV*NCRTYP
Trigger: TGGATATGTTCTGCAATTCAACACATCCACAGGTTC...ACAGATAAACTTGAACGAGATAGGTTGATTCTCTTCCTTAACAAGTTGATCCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS CCA 90 bp CATTTGTTTGAGGTTTTGTATCAACTATGCAACAACTCCTTTCCATaGGCTAATCTTGCTGTGGTTTCCAAAATTCCATCTGTATACATA +
Preference number: 5 (lower is better)
Translates to: HLFEVLYQLCNNSFP*ANLAVVSKIPSVYI
Trigger: TATGTATACAGATGGAATTTTGGAAACCACAGCAAGATTAGCCCATGGAAAGGAGTTGTTGCATAGTTGATACAAAACCTCAAACAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513822.1
CDS-3UTR CAA 90 bp CCATATCAAATATGGACTTTCTGTGTTGCTGTTAAGCATCTTCAAAATCTCAGTAAATTACAGGTTTTCTaGAGTCACTCCAGTGATGCT +
Preference number: 5 (lower is better)
Translates to: PYQIWTFCVAVKHLQNLSKLQVF*SHSSDA
Trigger: AGCATCACTGGAGTGACTCAAGAAAACCTGTAATTT...ACTGAGATTTTGAAGATGCTTAACAGCAACACAGAAAGTCCATATTTGATATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS-3UTR CAA 90 bp GGGTTATCTTGCATGATATGGTATAACAAAATAGCAACCTTCTCAACAAGGATAGCATTTAACATTCCTTaGGTCCACAATTCTTGCATC +
Preference number: 5 (lower is better)
Translates to: GLSCMIWYNKIATFSTRIAFNIP*VHNSCI
Trigger: GATGCAAGAATTGTGGACCAAAGGAATGTTAAATGC...TATCCTTGTTGAGAAGGTTGCTATTTTGTTATACCATATCATGCAAGATAACCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506813.1
ENST00000650455.1
CDS TCA 72 bp CAAGCTGCCTGGCAGAGCGGATCTAAAGCCCGCTCCTaGGGTGAAGGGGGCTGCTGCCAGTTAGAAGGGAAG +
Preference number: 6 (lower is better)
Translates to: QAAWQSGSKARS*GEGGCCQLEGK
Trigger: CTTCCCTTCTAACTGGCAGCAGCCCCCTTCACCTCAGGAGCGGGCTTTAGATCCGCTCTGCCAGGCAGCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509279.1
CDS TCA 72 bp GGTGAAGGCTCTCTACTTCCTCATCAACAGGCATGCTaGGTAACCCCCATCGCTGACCTTTATGGGTTGGTG +
Preference number: 6 (lower is better)
Translates to: GEGSLLPHQQAC*VTPIADLYGLV
Trigger: CACCAACCCATAAAGGTCAGCGATGGGGGTTACTCAGCATGCCTGTTGATGAGGAAGTAGAGAGCCTTCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260818.11
ENST00000471925.1
ENST00000486798.5
ENST00000650455.1
CDS TCA 72 bp GCTTTGGATGCCACAAGCCTCCTCACAGCCTGGAACTaGCTCTCAAGTTCCGCATTTGAAGCAACGACATCC +
Preference number: 6 (lower is better)
Translates to: ALDATSLLTAWN*LSSSAFEATTS
Trigger: GGATGTCGTTGCTTCAAATGCGGAACTTGAGAGTCAGTTCCAGGCTGTGAGGAGGCTTGTGGCATCCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260818.11
ENST00000471925.1
ENST00000486798.5
ENST00000650455.1
CDS CAA 90 bp CCACAAGCCTCCTCACAGCCTGGAACTGACTCTCAAGTTCCGCATTaGAAGCAACGACATCCCCTTCTTGGGACAGTAATGCTGTTATGG +
Preference number: 6 (lower is better)
Translates to: PQASSQPGTDSQVPH*KQRHPLLGTVMLLW
Trigger: CCATAACAGCATTACTGTCCCAAGAAGGGGATGTCGTTGCTTCAAATGCGGAACTTGAGAGTCAGTTCCAGGCTGTGAGGAGGCTTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260818.11
ENST00000471925.1
ENST00000486798.5
ENST00000650455.1
CDS TCA 72 bp AAGTTGCCATTTGGAGGCGTAGCTAAGAACCTGAGGTaGAGGCTCTCTACTTCCTCATCAACAGGCATGCTG +
Preference number: 6 (lower is better)
Translates to: KLPFGGVAKNLR*RLSTSSSTGML
Trigger: CAGCATGCCTGTTGATGAGGAAGTAGAGAGCCTTCACCTCAGGTTCTTAGCTACGCCTCCAAATGGCAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260818.11
ENST00000471925.1
ENST00000486798.5
ENST00000650455.1
CDS CAA 72 bp TCCTCACAGCCTGGAACTGACTCTCAAGTTCCGCATTaGAAGCAACGACATCCCCTTCTTGGGACAGTAATG +
Preference number: 6 (lower is better)
Translates to: SSQPGTDSQVPH*KQRHPLLGTVM
Trigger: CATTACTGTCCCAAGAAGGGGATGTCGTTGCTTCAAATGCGGAACTTGAGAGTCAGTTCCAGGCTGTGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260818.11
ENST00000471925.1
ENST00000486798.5
ENST00000650455.1
CDS GCA 72 bp TTGGATGCTACCATCTCCAAGAGCATATCAAACTGCTaGCCTTCAGTTGTCTCACTATATGGAGCACAGAGG +
Preference number: 6 (lower is better)
Translates to: LDATISKSISNC*PSVVSLYGAQR
Trigger: CCTCTGTGCTCCATATAGTGAGACAACTGAAGGGCAGCAGTTTGATATGCTCTTGGAGATGGTAGCATCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000486798.5
ENST00000650455.1
CDS GCA 72 bp TTAGATCTTTACTGCGCAAACAGCTTTCAGGTGTGCTaGTTCTTTAGCCCTGTGACTACCCTAGCTCAGCAA +
Preference number: 6 (lower is better)
Translates to: LDLYCANSFQVC*FFSPVTTLAQQ
Trigger: TTGCTGAGCTAGGGTAGTCACAGGGCTAAAGAAGCAGCACACCTGAAAGCTGTTTGCGCAGTAAAGATCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471925.1
CDS GCA 72 bp AAGTTAGATCTTTACTGCGCAAACAGCTTTCAGGTGTaGTGCTTCTTTAGCCCTGTGACTACCCTAGCTCAG +
Preference number: 6 (lower is better)
Translates to: KLDLYCANSFQV*CFFSPVTTLAQ
Trigger: CTGAGCTAGGGTAGTCACAGGGCTAAAGAAGCAGCACACCTGAAAGCTGTTTGCGCAGTAAAGATCTAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471925.1
CDS GCA 72 bp CCCTCTGTACAAGCTGCCACTAAGTTAGATCTTTACTaGGCAAACAGCTTTCAGGTGTGCTGCTTCTTTAGC +
Preference number: 6 (lower is better)
Translates to: PSVQAATKLDLY*ANSFQVCCFFS
Trigger: GCTAAAGAAGCAGCACACCTGAAAGCTGTTTGCGCAGTAAAGATCTAACTTAGTGGCAGCTTGTACAGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471925.1
CDS CAA 72 bp ACTGCCTTTACGAAATGTGAGGTTGAACTCCGTTCCTaGTCCTTTTCCAACAGGGCTGATGCTGCAAATGTC +
Preference number: 6 (lower is better)
Translates to: TAFTKCEVELRS*SFSNRADAANV
Trigger: GACATTTGCAGCATCAGCCCTGTTGGAAAAGGACAAGGAACGGAGTTCAACCTCACATTTCGTAAAGGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000486798.5
ENST00000650455.1
CDS TCA 72 bp TCCTCATCAACAGGCATGCTGAGTAACCCCCATCGCTaGCCTTTATGGGTTGGTGTCATTTTTACACAAACA +
Preference number: 6 (lower is better)
Translates to: SSSTGMLSNPHR*PLWVGVIFTQT
Trigger: TGTTTGTGTAAAAATGACACCAACCCATAAAGGTCAGCGATGGGGGTTACTCAGCATGCCTGTTGATGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000486798.5
ENST00000650455.1
CDS TCA 72 bp CTGACAGCAGTCTTTTCACTTTGGGTAGAGGCCGAATaGTGGCATTGTCTTGATCCCTGCTTGGAAAATATC +
Preference number: 6 (lower is better)
Translates to: LTAVFSLWVEAE*WHCLDPCLENI
Trigger: GATATTTTCCAAGCAGGGATCAAGACAATGCCATCATTCGGCCTCTACCCAAAGTGAAAAGACTGCTGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260818.11
CDS GCA 72 bp TGTCGAGGTAAGGCACCTTCACTTAGGGCAAGCTCCTaGATTTTTGTAGCAATTTCTTTATCACCTTCCTCT +
Preference number: 6 (lower is better)
Translates to: CRGKAPSLRASS*IFVAISLSPSS
Trigger: AGAGGAAGGTGATAAAGAAATTGCTACAAAAATGCAGGAGCTTGCCCTAAGTGAAGGTGCCTTACCTCGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000486798.5
ENST00000650455.1
CDS CAA 72 bp TGCTTTTCAAGATCCTATGGCCCCTACTACCTTACCTaGTACAGATATGCCTACCTTACCAGACTGTCAACA +
Preference number: 6 (lower is better)
Translates to: CFSRSYGPYYLT*YRYAYLTRLST
Trigger: TGTTGACAGTCTGGTAAGGTAGGCATATCTGTACAAGGTAAGGTAGTAGGGGCCATAGGATCTTGAAAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471925.1
CDS CAA 90 bp CAAAGCATATCAACTGCTGCATGGATTATTCCGTTGTTGCTTCTTTaGAGTGCTTTTACTACCTTCACCCCTAGACGCTCGCGAAACTTT +
Preference number: 6 (lower is better)
Translates to: QSISTAAWIIPLLLL*SAFTTFTPRRSRNF
Trigger: AAAGTTTCGCGAGCGTCTAGGGGTGAAGGTAGTAAAAGCACTCAAAAGAAGCAACAACGGAATAATCCATGCAGCAGTTGATATGCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260818.11
ENST00000471925.1
ENST00000486798.5
ENST00000650455.1
CDS CCA 72 bp TCAAGTTCCGCATTTGAAGCAACGACATCCCCTTCTTaGGACAGTAATGCTGTTATGGCATTATTGATCAGT +
Preference number: 6 (lower is better)
Translates to: SSSAFEATTSPS*DSNAVMALLIS
Trigger: ACTGATCAATAATGCCATAACAGCATTACTGTCCCAAGAAGGGGATGTCGTTGCTTCAAATGCGGAACTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260818.11
ENST00000471925.1
ENST00000486798.5
ENST00000650455.1
CDS CAA 90 bp TTTGGTCAAAGCCTCCTGGAGTTACTTCCAAAATTACAGGTTTTCTaGAGTCACTCCAGTGATGCTTATAGCAGTTGTATCTCCTTCCTG +
Preference number: 6 (lower is better)
Translates to: FGQSLLELLPKLQVF*SHSSDAYSSCISFL
Trigger: CAGGAAGGAGATACAACTGCTATAAGCATCACTGGAGTGACTCAAGAAAACCTGTAATTTTGGAAGTAACTCCAGGAGGCTTTGACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000486798.5
ENST00000650455.1
CDS CAA 72 bp AGCCTCCTGGAGTTACTTCCAAAATTACAGGTTTTCTaGAGTCACTCCAGTGATGCTTATAGCAGTTGTATC +
Preference number: 6 (lower is better)
Translates to: SLLELLPKLQVF*SHSSDAYSSCI
Trigger: GATACAACTGCTATAAGCATCACTGGAGTGACTCAAGAAAACCTGTAATTTTGGAAGTAACTCCAGGAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000486798.5
ENST00000650455.1
CDS CAA 90 bp TCTTGTGTTACTGCATGTAGGACTCCACTGTATGAAATATTAGCATaGAACCTGAATACAGCATCTGCAAAGTTGCCATTTGGAGGCGTA +
Preference number: 6 (lower is better)
Translates to: SCVTACRTPLYEILA*NLNTASAKLPFGGV
Trigger: TACGCCTCCAAATGGCAACTTTGCAGATGCTGTATTCAGGTTCAATGCTAATATTTCATACAGTGGAGTCCTACATGCAGTAACACAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260818.11
ENST00000471925.1
ENST00000486798.5
ENST00000650455.1
CDS GCA 72 bp ATTTCTATAGTCATAGGAACAGAGTACTCTGTTGGTTaGAGGATTAATTTGGTCAAAGCCTCCTGGAGTTAC +
Preference number: 6 (lower is better)
Translates to: ISIVIGTEYSVG*RINLVKASWSY
Trigger: GTAACTCCAGGAGGCTTTGACCAAATTAATCCTGCAACCAACAGAGTACTCTGTTCCTATGACTATAGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000486798.5
ENST00000650455.1
CDS CCA 72 bp GAGGTTTTGTATCAACTATGCAACAACTCCTTTCCATaGGCTAATCTTGCTGTGGTTTCCAAAATTCCATCT +
Preference number: 6 (lower is better)
Translates to: EVLYQLCNNSFP*ANLAVVSKIPS
Trigger: AGATGGAATTTTGGAAACCACAGCAAGATTAGCCCATGGAAAGGAGTTGTTGCATAGTTGATACAAAACCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513822.1
CDS CAA 72 bp ATAGGAACAGAGTACTCTGTTGGTTGCAGGATTAATTaGGTCAAAGCCTCCTGGAGTTACTTCCAAAATTAC +
Preference number: 6 (lower is better)
Translates to: IGTEYSVGCRIN*VKASWSYFQNY
Trigger: GTAATTTTGGAAGTAACTCCAGGAGGCTTTGACCAAATTAATCCTGCAACCAACAGAGTACTCTGTTCCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000486798.5
ENST00000650455.1
CDS CAA 72 bp AGACCAACGCAAATACTTCTCCTAAAGGCTTCAATGTaGCAATATTATAGGTTGCCGGATCACGTTCTACTA +
Preference number: 6 (lower is better)
Translates to: RPTQILLLKASM*QYYRLPDHVLL
Trigger: TAGTAGAACGTGATCCGGCAACCTATAATATTGCAACATTGAAGCCTTTAGGAGAAGTATTTGCGTTGGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000486798.5
ENST00000650455.1
CDS CAA 72 bp TACCCTAGCTCAGCAACTCATTTCTTACGTGACAATTaGGTCTACCTGCCTCTAATTTTACTTCTATTCTCC +
Preference number: 6 (lower is better)
Translates to: YPSSATHFLRDN*VYLPLILLLFS
Trigger: GGAGAATAGAAGTAAAATTAGAGGCAGGTAGACCAAATTGTCACGTAAGAAATGAGTTGCTGAGCTAGGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471925.1
CDS CAA 90 bp TCTATAGTCATAGGAACAGAGTACTCTGTTGGTTGCAGGATTAATTaGGTCAAAGCCTCCTGGAGTTACTTCCAAAATTACAGGTTTTCT +
Preference number: 6 (lower is better)
Translates to: SIVIGTEYSVGCRIN*VKASWSYFQNYRFS
Trigger: AGAAAACCTGTAATTTTGGAAGTAACTCCAGGAGGCTTTGACCAAATTAATCCTGCAACCAACAGAGTACTCTGTTCCTATGACTATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000486798.5
ENST00000650455.1
CDS CAA 90 bp ACTGTCAACAAAGTGAGGAAGAAAAGAACTTCTGTCTTAAGATCTTaGAATTTCTGGCACACAGCACATTGCCTGGTATTTAGGATATGC +
Preference number: 6 (lower is better)
Translates to: TVNKVRKKRTSVLRS*NFWHTAHCLVFRIC
Trigger: GCATATCCTAAATACCAGGCAATGTGCTGTGTGCCAGAAATTCAAAGATCTTAAGACAGAAGTTCTTTTCTTCCTCACTTTGTTGACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471925.1
CDS CAA 90 bp GGGCTAATCTTGCTGTGGTTTCCAAAATTCCATCTGTATACATACTaGATGGCAATGAATGTAGAAGAGCCAATAAACTGGACAAAACCA +
Preference number: 6 (lower is better)
Translates to: GLILLWFPKFHLYTY*MAMNVEEPINWTKP
Trigger: TGGTTTTGTCCAGTTTATTGGCTCTTCTACATTCATTGCCATCAAGTATGTATACAGATGGAATTTTGGAAACCACAGCAAGATTAGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513822.1
CDS CAA 90 bp AGGTTTTGTATCAACTATGCAACAACTCCTTTCCATGGGCTAATCTaGCTGTGGTTTCCAAAATTCCATCTGTATACATACTTGATGGCA +
Preference number: 6 (lower is better)
Translates to: RFCINYATTPFHGLI*LWFPKFHLYTYLMA
Trigger: TGCCATCAAGTATGTATACAGATGGAATTTTGGAAACCACAGCAAGATTAGCCCATGGAAAGGAGTTGTTGCATAGTTGATACAAAACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513822.1
CDS TCA 72 bp ACTTCTAAGGTATTGGGATTATATGTAGTAATCGCATaGGTTCCAACTGAAAAGACACGCTTATACTTCCCC +
Preference number: 6 (lower is better)
Translates to: TSKVLGLYVVIA*VPTEKTRLYFP
Trigger: GGGGAAGTATAAGCGTGTCTTTTCAGTTGGAACTCATGCGATTACTACATATAATCCCAATACCTTAGAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000486798.5
ENST00000650455.1
CDS TCA 72 bp TTCAGATCAAATGTAACATCTTCCAGAAAGACTGGGTaGGAATCTTTCATCTTCCCCTCATCACCAAACAAA +
Preference number: 6 (lower is better)
Translates to: FRSNVTSSRKTG*ESFIFPSSPNK
Trigger: TTTGTTTGGTGATGAGGGGAAGATGAAAGATTCTCACCCAGTCTTTCTGGAAGATGTTACATTTGATCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471925.1
CDS TCA 72 bp TGCTTTATCTCAGCTATTTGTAAGCATCCTTTGATCTaGGCTTATTGTAAACATCGCAGTATGCAAGTGTCG +
Preference number: 6 (lower is better)
Translates to: CFISAICKHPLI*AYCKHRSMQVS
Trigger: CGACACTTGCATACTGCGATGTTTACAATAAGCTCAGATCAAAGGATGCTTACAAATAGCTGAGATAAAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS CAA 72 bp ACTGCATGTAGGACTCCACTGTATGAAATATTAGCATaGAACCTGAATACAGCATCTGCAAAGTTGCCATTT +
Preference number: 6 (lower is better)
Translates to: TACRTPLYEILA*NLNTASAKLPF
Trigger: AAATGGCAACTTTGCAGATGCTGTATTCAGGTTCAATGCTAATATTTCATACAGTGGAGTCCTACATGCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260818.11
ENST00000471925.1
ENST00000486798.5
ENST00000650455.1
CDS CAA 72 bp ATCAACTATGCAACAACTCCTTTCCATGGGCTAATCTaGCTGTGGTTTCCAAAATTCCATCTGTATACATAC +
Preference number: 6 (lower is better)
Translates to: INYATTPFHGLI*LWFPKFHLYTY
Trigger: GTATGTATACAGATGGAATTTTGGAAACCACAGCAAGATTAGCCCATGGAAAGGAGTTGTTGCATAGTTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513822.1
CDS TCA 72 bp GATTCAAATATTGCTCGAATTCTAAAGGCTCTTTCCTaGTCCGCAATGAAATACCTATGTAGTTACCAGCAT +
Preference number: 6 (lower is better)
Translates to: DSNIARILKALS*SAMKYLCSYQH
Trigger: ATGCTGGTAACTACATAGGTATTTCATTGCGGATCAGGAAAGAGCCTTTAGAATTCGAGCAATATTTGAATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260818.11
ENST00000486798.5
ENST00000650455.1
CDS TCA 72 bp TTTGCTGCTTTATCTCAGCTATTTGTAAGCATCCTTTaGTCTGAGCTTATTGTAAACATCGCAGTATGCAAG +
Preference number: 6 (lower is better)
Translates to: FAALSQLFVSIL*SELIVNIAVCK
Trigger: CTTGCATACTGCGATGTTTACAATAAGCTCAGATCAAAGGATGCTTACAAATAGCTGAGATAAAGCAGCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650455.1
CDS CCA 72 bp AAGAAAAGAACTTCTGTCTTAAGATCTTTGAATTTCTaGCACACAGCACATTGCCTGGTATTTAGGATATGC +
Preference number: 6 (lower is better)
Translates to: KKRTSVLRSLNF*HTAHCLVFRIC
Trigger: GCATATCCTAAATACCAGGCAATGTGCTGTGTGCCAGAAATTCAAAGATCTTAAGACAGAAGTTCTTTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471925.1
CDS CAA 72 bp AAAGTGAGGAAGAAAAGAACTTCTGTCTTAAGATCTTaGAATTTCTGGCACACAGCACATTGCCTGGTATTT +
Preference number: 6 (lower is better)
Translates to: KVRKKRTSVLRS*NFWHTAHCLVF
Trigger: AAATACCAGGCAATGTGCTGTGTGCCAGAAATTCAAAGATCTTAAGACAGAAGTTCTTTTCTTCCTCACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471925.1
CDS CAA 72 bp TTGCTGTGGTTTCCAAAATTCCATCTGTATACATACTaGATGGCAATGAATGTAGAAGAGCCAATAAACTGG +
Preference number: 6 (lower is better)
Translates to: LLWFPKFHLYTY*MAMNVEEPINW
Trigger: CCAGTTTATTGGCTCTTCTACATTCATTGCCATCAAGTATGTATACAGATGGAATTTTGGAAACCACAGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513822.1
CDS TCA 72 bp AAATGTCTACTTAGCTGTCTATTTGTAAGCATCCTTTaGTCTGAGCTTATTGTAAACATCGCAGTATGCAAG +
Preference number: 6 (lower is better)
Translates to: KCLLSCLFVSIL*SELIVNIAVCK
Trigger: CTTGCATACTGCGATGTTTACAATAAGCTCAGATCAAAGGATGCTTACAAATAGACAGCTAAGTAGACATTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260818.11
ENST00000486798.5