Pregenerated sensors for DNAJC1 (Homo sapiens)
Ensembl gene IDs: ENSG00000136770Ensembl transcript IDs: ENST00000376946.2, ENST00000376980.8, ENST00000447548.5, ENST00000476103.3, ENST00000483085.1
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | CACCCGCCTGTAGTAGAATACAGGCTGTCGCCAATCTGGAAGTCCATTGATCAGCGTGGCGGGCGGCGCTaGCTGTGGGGAACAGCGCCT | + |
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Preference number: 4 (lower is better) Translates to: HPPVVEYRLSPIWKSIDQRGGRR*LWGTAP Trigger: AGGCGCTGTTCCCCACAGCCAGCGCCGCCCGCCACG...CTGATCAATGGACTTCCAGATTGGCGACAGCCTGTATTCTACTACAGGCGGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476103.3 |
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| CDS-3UTR CCA 90 bp | TGCCAGCTCAGCATTGCTCATTTTTCTCACCCGCCTGTAGTAGAATACAGGCTGGCCGCGCAGCTCCGTTaGCCGAGAGCTGGGACGTGG | + |
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Preference number: 4 (lower is better) Translates to: CQLSIAHFSHPPVVEYRLAAQLR*PRAGTW Trigger: CCACGTCCCAGCTCTCGGCCAACGGAGCTGCGCGGC...CAGCCTGTATTCTACTACAGGCGGGTGAGAAAAATGAGCAATGCTGAGCTGGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000476103.3 |
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| CDS-3UTR CCA 90 bp | TTTTCTCACCCGCCTGTAGTAGAATACAGGCTGTCGCCAATCTGGAAGTCCATTGGCACCAGCCCGAGCTaGCGGCGTCCAGGAAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: FSHPPVVEYRLSPIWKSIGTSPS*RRPGSC Trigger: GCAGCTTCCTGGACGCCGCCAGCTCGGGCTGGTGCC...AATGGACTTCCAGATTGGCGACAGCCTGTATTCTACTACAGGCGGGTGAGAAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476103.3 |
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| CDS-3UTR CCA 90 bp | TCATTTTTCTCACCCGCCTGTAGTAGAATACAGGCTGTCGCCAATCTGGAAGTCGGGCGGCGCTGGCTGTaGGGAACAGCGCCTGTCAGT | + |
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Preference number: 4 (lower is better) Translates to: SFFSPACSRIQAVANLEVGRRWL*GTAPVS Trigger: ACTGACAGGCGCTGTTCCCCACAGCCAGCGCCGCCC...GACTTCCAGATTGGCGACAGCCTGTATTCTACTACAGGCGGGTGAGAAAAATGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000476103.3 |
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| CDS-3UTR CCA 90 bp | AGAATAATGAACAAGAGTAATGCCAGCTCAGCATTGCTCATTTTTCTCACCCGCCCGAGAGCTGGGACGTaGCGGGCGGCGCTGGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: RIMNKSNASSALLIFLTRPRAGT*RAALAV Trigger: CACAGCCAGCGCCGCCCGCCACGTCCCAGCTCTCGG...GCGGGTGAGAAAAATGAGCAATGCTGAGCTGGCATTACTCTTGTTCATTATTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000476103.3 |
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| CDS-3UTR CCA 90 bp | AGAATAATGAACAAGAGTAATGCCAGCTCAGCATTGCTCATTTTTCTCACCCGCCCGTTGGCCGAGAGCTaGGACGTGGCGGGCGGCGCT | + |
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Preference number: 4 (lower is better) Translates to: RIMNKSNASSALLIFLTRPLAES*DVAGGA Trigger: AGCGCCGCCCGCCACGTCCCAGCTCTCGGCCAACGG...GCGGGTGAGAAAAATGAGCAATGCTGAGCTGGCATTACTCTTGTTCATTATTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000476103.3 |
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| CDS-3UTR CCA 90 bp | CATTGCTCATTTTTCTCACCCGCCTGTAGTAGAATACAGGCTGTCGCCAATCTGGAGCCGTCATCGCGCTaGGCTCGGAAAGGTCACCCG | + |
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Preference number: 4 (lower is better) Translates to: HCSFFSPACSRIQAVANLEPSSR*ARKGHP Trigger: CGGGTGACCTTTCCGAGCCCAGCGCGATGACGGCTC...CAGATTGGCGACAGCCTGTATTCTACTACAGGCGGGTGAGAAAAATGAGCAATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000476103.3 |
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| CDS-3UTR TCA 90 bp | CCTGTAGTAGAATACAGGCTGTCGCCAATCTGGAAGTCCATTGATCAGAATATCAACAGCGCCTGTCAGTaGAAAGCGCGGGCAGGCGCA | + |
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Preference number: 4 (lower is better) Translates to: PVVEYRLSPIWKSIDQNINSACQ*KARAGA Trigger: TGCGCCTGCCCGCGCTTTTCACTGACAGGCGCTGTT...GATATTCTGATCAATGGACTTCCAGATTGGCGACAGCCTGTATTCTACTACAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476103.3 |
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| CDS-3UTR GCA 90 bp | TTTTCTCACCCGCCTGTAGTAGAATACAGGCTGTCGCCAATCTGGAAGTCCATTGCAGATGATGCATCCTaGTGCACCCCGAGGAACTGG | + |
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Preference number: 4 (lower is better) Translates to: FSHPPVVEYRLSPIWKSIADDAS*CTPRNW Trigger: CCAGTTCCTCGGGGTGCAGCAGGATGCATCATCTGC...AATGGACTTCCAGATTGGCGACAGCCTGTATTCTACTACAGGCGGGTGAGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000476103.3 |
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| CDS-3UTR TCA 90 bp | TGCCAGCTCAGCATTGCTCATTTTTCTCACCCGCCTGTAGTAGAATACAGGCTGGGAACTGGTAGAAGTTaGGCTGCACCTCCTCCACTA | + |
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Preference number: 4 (lower is better) Translates to: CQLSIAHFSHPPVVEYRLGTGRS*AAPPPL Trigger: TAGTGGAGGAGGTGCAGCTCAACTTCTACCAGTTCC...CAGCCTGTATTCTACTACAGGCGGGTGAGAAAAATGAGCAATGCTGAGCTGGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000476103.3 |
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| CDS-3UTR TCA 90 bp | TTTTTCTCACCCGCCTGTAGTAGAATACAGGCTGTCGCCAATCTGGAAGTCCATTCTGATGTCTGCAGATaGTGCATCCTGCTGCACCCC | + |
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Preference number: 4 (lower is better) Translates to: FFSPACSRIQAVANLEVHSDVCR*CILLHP Trigger: GGGGTGCAGCAGGATGCATCATCTGCAGACATCAGA...ATGGACTTCCAGATTGGCGACAGCCTGTATTCTACTACAGGCGGGTGAGAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000476103.3 |
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| CDS-3UTR TCA 90 bp | TGCCAGCTCAGCATTGCTCATTTTTCTCACCCGCCTGTAGTAGAATACAGGCTGTACGATATGCTTTTCTaGTGTCTGCAGATGATGCAT | + |
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Preference number: 4 (lower is better) Translates to: CQLSIAHFSHPPVVEYRLYDMLF*CLQMMH Trigger: ATGCATCATCTGCAGACATCAGAAAAGCATATCGTA...CAGCCTGTATTCTACTACAGGCGGGTGAGAAAAATGAGCAATGCTGAGCTGGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000476103.3 |
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| CDS-3UTR TCA 90 bp | CATTGCTCATTTTTCTCACCCGCCTGTAGTAGAATACAGGCTGTCGCCAATCTGTTTTTCCAGGTAGATTaGCCAAACCACAGCATAATG | + |
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Preference number: 4 (lower is better) Translates to: HCSFFSPACSRIQAVANLFFQVD*PNHSIM Trigger: CATTATGCTGTGGTTTGGTCAATCTACCTGGAAAAA...CAGATTGGCGACAGCCTGTATTCTACTACAGGCGGGTGAGAAAAATGAGCAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000476103.3 |
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| CDS-3UTR GCA 90 bp | GTGAGAATAATGAACAAGAGTAATGCCAGCTCAGCATTGCTCATTTTTCTCACCATGCCAGCTCAGCATTaGTCATTTTTCTCACCCGCC | + |
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Preference number: 4 (lower is better) Translates to: VRIMNKSNASSALLIFLTMPAQH*SFFSPA Trigger: GGCGGGTGAGAAAAATGAGCAATGCTGAGCTGGCAT...GGTGAGAAAAATGAGCAATGCTGAGCTGGCATTACTCTTGTTCATTATTCTCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000476103.3 |
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| CDS-3UTR CCA 90 bp | CCCACTGTGAGAATAATGAACAAGAGTAATGCCAGCTCAGCATTGCTCATTTTTAGGCTGTCGCCAATCTaGAAGTCCATTGATCAGAAT | + |
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Preference number: 4 (lower is better) Translates to: PTVRIMNKSNASSALLIFRLSPI*KSIDQN Trigger: ATTCTGATCAATGGACTTCCAGATTGGCGACAGCCT...AAAAATGAGCAATGCTGAGCTGGCATTACTCTTGTTCATTATTCTCACAGTGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000476103.3 |
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| CDS TCA 90 bp | GGGACGTGGCGGGCGGCGCTGGCTGTGGGGAACAGCGCCTGTCAGTaGAAAGCGCGGGCAGGCGCACCGGAGCGGCCCGCCAGGTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: GTWRAALAVGNSACQ*KARAGAPERPARWL Trigger: CAGCCACCTGGCGGGCCGCTCCGGTGCGCCTGCCCGCGCTTTTCACTGACAGGCGCTGTTCCCCACAGCCAGCGCCGCCCGCCACGTCCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000376946.2 ENST00000376980.8 ENST00000476103.3 |
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| CDS CCA 90 bp | CCGCGCAGCTCCGTTGGCCGAGAGCTGGGACGTGGCGGGCGGCGCTaGCTGTGGGGAACAGCGCCTGTCAGTGAAAAGCGCGGGCAGGCG | + |
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Preference number: 5 (lower is better) Translates to: PRSSVGRELGRGGRR*LWGTAPVSEKRGQA Trigger: CGCCTGCCCGCGCTTTTCACTGACAGGCGCTGTTCCCCACAGCCAGCGCCGCCCGCCACGTCCCAGCTCTCGGCCAACGGAGCTGCGCGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000376946.2 ENST00000376980.8 ENST00000476103.3 |
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| CDS CCA 90 bp | GTCATCGCGCTGGGCTCGGAAAGGTCACCCGCCGCGCAGCTCCGTTaGCCGAGAGCTGGGACGTGGCGGGCGGCGCTGGCTGTGGGGAAC | + |
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Preference number: 5 (lower is better) Translates to: VIALGSERSPAAQLR*PRAGTWRAALAVGN Trigger: GTTCCCCACAGCCAGCGCCGCCCGCCACGTCCCAGCTCTCGGCCAACGGAGCTGCGCGGCGGGTGACCTTTCCGAGCCCAGCGCGATGAC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000376946.2 ENST00000376980.8 ENST00000476103.3 |
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| CDS CCA 90 bp | AACGGCACCAGCCCGAGCTGGCGGCGTCCAGGAAGCTGCGCCGGCTaGGAGCAAGGAGCCGTCATCGCGCTGGGCTCGGAAAGGTCACCC | + |
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Preference number: 5 (lower is better) Translates to: NGTSPSWRRPGSCAG*EQGAVIALGSERSP Trigger: GGGTGACCTTTCCGAGCCCAGCGCGATGACGGCTCCTTGCTCCCAGCCGGCGCAGCTTCCTGGACGCCGCCAGCTCGGGCTGGTGCCGTT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000376946.2 ENST00000376980.8 ENST00000476103.3 |
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| CDS CCA 90 bp | CTTCTCCTCTGGCTCCGGCTTCGCTGTAGCCTCCAGCAGCCTGGCTaGCTTCCGCCTCCGAGGCCGGGCATCAGTGGCCCCGGTCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: LLLWLRLRCSLQQPG*LPPPRPGISGPGLL Trigger: CAGGAGACCGGGGCCACTGATGCCCGGCCTCGGAGGCGGAAGCCAGCCAGGCTGCTGGAGGCTACAGCGAAGCCGGAGCCAGAGGAGAAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376980.8 |
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| CDS GCA 90 bp | CCCAGGCCTACACACAGCTGTAGAGGCAGCGCCCGGCGCCTGGGCTaGACAGTGGGTGAGGCTTCCCTTCGCCTCAGCCTATCCCAGGCC | + |
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Preference number: 5 (lower is better) Translates to: PRPTHSCRGSARRLG*TVGEASLRLSLSQA Trigger: GGCCTGGGATAGGCTGAGGCGAAGGGAAGCCTCACCCACTGTGCAGCCCAGGCGCCGGGCGCTGCCTCTACAGCTGTGTGTAGGCCTGGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376946.2 |
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| CDS CCA 90 bp | TCGCCCCCAGGCCTACACACAGCTGTAGAGGCAGCGCCCGGCGCCTaGGCTGCACAGTGGGTGAGGCTTCCCTTCGCCTCAGCCTATCCC | + |
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Preference number: 5 (lower is better) Translates to: SPPGLHTAVEAAPGA*AAQWVRLPFASAYP Trigger: GGGATAGGCTGAGGCGAAGGGAAGCCTCACCCACTGTGCAGCCCAGGCGCCGGGCGCTGCCTCTACAGCTGTGTGTAGGCCTGGGGGCGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376946.2 |
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| CDS CCA 90 bp | TGCTATGTCAAAGTCCTTCTGCCGCTTGGCTCTGGACTTCTCCTCTaGCTCCGGCTTCGCTGTAGCCTCCAGCAGCCTGGCTGGCTTCCG | + |
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Preference number: 5 (lower is better) Translates to: CYVKVLLPLGSGLLL*LRLRCSLQQPGWLP Trigger: CGGAAGCCAGCCAGGCTGCTGGAGGCTACAGCGAAGCCGGAGCCAGAGGAGAAGTCCAGAGCCAAGCGGCAGAAGGACTTTGACATAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376980.8 |
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| CDS-3UTR CAA 90 bp | TGCTCATTTTTCTCACCCGCCTGTAGTAGAATACAGGCTGTCGCCAATCTGGAACGCCGCGCAGCTCCGTaGGCCGAGAGCTGGGACGTG | + |
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Preference number: 5 (lower is better) Translates to: CSFFSPACSRIQAVANLERRAAP*AESWDV Trigger: CACGTCCCAGCTCTCGGCCAACGGAGCTGCGCGGCG...TTCCAGATTGGCGACAGCCTGTATTCTACTACAGGCGGGTGAGAAAAATGAGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000476103.3 |
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| CDS TCA 90 bp | CTGCAGATGATGCATCCTGCTGCACCCCGAGGAACTGGTAGAAGTTaGGCTGCACCTCCTCCACTAAGTCAAACAACTCCAGGTCTCCGC | + |
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Preference number: 5 (lower is better) Translates to: LQMMHPAAPRGTGRS*AAPPPLSQTTPGLR Trigger: GCGGAGACCTGGAGTTGTTTGACTTAGTGGAGGAGGTGCAGCTCAACTTCTACCAGTTCCTCGGGGTGCAGCAGGATGCATCATCTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000376946.2 ENST00000376980.8 ENST00000447548.5 ENST00000476103.3 |
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| CDS GCA 90 bp | TCCTCGTCGCTGGACTCGTTTTGTTCTGCTATGTCAAAGTCCTTCTaGCGCTTGGCTCTGGACTTCTCCTCTGGCTCCGGCTTCGCTGTA | + |
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Preference number: 5 (lower is better) Translates to: SSSLDSFCSAMSKSF*RLALDFSSGSGFAV Trigger: TACAGCGAAGCCGGAGCCAGAGGAGAAGTCCAGAGCCAAGCGGCAGAAGGACTTTGACATAGCAGAACAAAACGAGTCCAGCGACGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376980.8 |
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| CDS CCA 90 bp | CCTCTGCAGACCGAGCTCTCTCTTTTCTCAGGCTCTCCTCGTCGCTaGACTCGTTTTGTTCTGCTATGTCAAAGTCCTTCTGCCGCTTGG | + |
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Preference number: 5 (lower is better) Translates to: PLQTELSLFSGSPRR*TRFVLLCQSPSAAW Trigger: CCAAGCGGCAGAAGGACTTTGACATAGCAGAACAAAACGAGTCCAGCGACGAGGAGAGCCTGAGAAAAGAGAGAGCTCGGTCTGCAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376980.8 |
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| CDS TCA 90 bp | ATGTCATCGGGCAAGGTGGTGGCCGTTTTGATGGGCCTGGAATTCTaGACTGTCGATTTGAGTTCGGAGAGTCTAACCATTCCTGGGGAG | + |
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Preference number: 5 (lower is better) Translates to: MSSGKVVAVLMGLEF*TVDLSSESLTIPGE Trigger: CTCCCCAGGAATGGTTAGACTCTCCGAACTCAAATCGACAGTTCAGAATTCCAGGCCCATCAAAACGGCCACCACCTTGCCCGATGACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000376980.8 ENST00000483085.1 |
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| CDS CCA 90 bp | CATTTTTCTCACCCGCCTGTAGTAGAATACAGGCTGTCGCCAATCTaGAAGTCCATTGATCAGAATATCATCATACCTCTGCCTTCGTTC | + |
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Preference number: 5 (lower is better) Translates to: HFSHPPVVEYRLSPI*KSIDQNIIIPLPSF Trigger: GAACGAAGGCAGAGGTATGATGATATTCTGATCAATGGACTTCCAGATTGGCGACAGCCTGTATTCTACTACAGGCGGGTGAGAAAAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376980.8 |
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| CDS-3UTR CAA 90 bp | TGCCAGCTCAGCATTGCTCATTTTTCTCACCCGCCTGTAGTAGAATACAGGCTGGTTTTTCCAGGTAGATaGACCAAACCACAGCATAAT | + |
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Preference number: 5 (lower is better) Translates to: CQLSIAHFSHPPVVEYRLVFPGR*TKPQHN Trigger: ATTATGCTGTGGTTTGGTCAATCTACCTGGAAAAAC...CAGCCTGTATTCTACTACAGGCGGGTGAGAAAAATGAGCAATGCTGAGCTGGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000476103.3 |
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| CDS TCA 72 bp | CGGGCGGCGCTGGCTGTGGGGAACAGCGCCTGTCAGTaGAAAGCGCGGGCAGGCGCACCGGAGCGGCCCGCC | + |
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Preference number: 6 (lower is better) Translates to: RAALAVGNSACQ*KARAGAPERPA Trigger: GGCGGGCCGCTCCGGTGCGCCTGCCCGCGCTTTTCACTGACAGGCGCTGTTCCCCACAGCCAGCGCCGCCCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000376946.2 ENST00000376980.8 ENST00000476103.3 |
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| CDS CCA 72 bp | CCCGCCGCGCAGCTCCGTTGGCCGAGAGCTGGGACGTaGCGGGCGGCGCTGGCTGTGGGGAACAGCGCCTGT | + |
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Preference number: 6 (lower is better) Translates to: PAAQLRWPRAGT*RAALAVGNSAC Trigger: ACAGGCGCTGTTCCCCACAGCCAGCGCCGCCCGCCACGTCCCAGCTCTCGGCCAACGGAGCTGCGCGGCGGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000376946.2 ENST00000376980.8 ENST00000476103.3 |
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| CDS CAA 72 bp | GCTGGGCTCGGAAAGGTCACCCGCCGCGCAGCTCCGTaGGCCGAGAGCTGGGACGTGGCGGGCGGCGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: AGLGKVTRRAAP*AESWDVAGGAG Trigger: GCCAGCGCCGCCCGCCACGTCCCAGCTCTCGGCCAACGGAGCTGCGCGGCGGGTGACCTTTCCGAGCCCAGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000376946.2 ENST00000376980.8 ENST00000476103.3 |
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| CDS CCA 72 bp | CTGGGCTCGGAAAGGTCACCCGCCGCGCAGCTCCGTTaGCCGAGAGCTGGGACGTGGCGGGCGGCGCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: LGSERSPAAQLR*PRAGTWRAALA Trigger: AGCCAGCGCCGCCCGCCACGTCCCAGCTCTCGGCCAACGGAGCTGCGCGGCGGGTGACCTTTCCGAGCCCAG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000376946.2 ENST00000376980.8 ENST00000476103.3 |
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| CDS CAA 90 bp | CGTCATCGCGCTGGGCTCGGAAAGGTCACCCGCCGCGCAGCTCCGTaGGCCGAGAGCTGGGACGTGGCGGGCGGCGCTGGCTGTGGGGAA | + |
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Preference number: 6 (lower is better) Translates to: RHRAGLGKVTRRAAP*AESWDVAGGAGCGE Trigger: TTCCCCACAGCCAGCGCCGCCCGCCACGTCCCAGCTCTCGGCCAACGGAGCTGCGCGGCGGGTGACCTTTCCGAGCCCAGCGCGATGACG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000376946.2 ENST00000376980.8 ENST00000476103.3 |
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| CDS CCA 72 bp | GCTGCGCCGGCTGGGAGCAAGGAGCCGTCATCGCGCTaGGCTCGGAAAGGTCACCCGCCGCGCAGCTCCGTT | + |
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Preference number: 6 (lower is better) Translates to: AAPAGSKEPSSR*ARKGHPPRSSV Trigger: AACGGAGCTGCGCGGCGGGTGACCTTTCCGAGCCCAGCGCGATGACGGCTCCTTGCTCCCAGCCGGCGCAGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000376946.2 ENST00000376980.8 ENST00000476103.3 |
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| CDS CCA 72 bp | AGCCCGAGCTGGCGGCGTCCAGGAAGCTGCGCCGGCTaGGAGCAAGGAGCCGTCATCGCGCTGGGCTCGGAA | + |
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Preference number: 6 (lower is better) Translates to: SPSWRRPGSCAG*EQGAVIALGSE Trigger: TTCCGAGCCCAGCGCGATGACGGCTCCTTGCTCCCAGCCGGCGCAGCTTCCTGGACGCCGCCAGCTCGGGCT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000376946.2 ENST00000376980.8 ENST00000476103.3 |
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| CDS CCA 72 bp | GCCTGGCTGGCTTCCGCCTCCGAGGCCGGGCATCAGTaGCCCCGGTCTCCTGCTCACCGGAGTCTCCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: AWLASASEAGHQ*PRSPAHRSLPP Trigger: AGGAGGGAGACTCCGGTGAGCAGGAGACCGGGGCCACTGATGCCCGGCCTCGGAGGCGGAAGCCAGCCAGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376980.8 |
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| CDS CCA 72 bp | TGGCTCCGGCTTCGCTGTAGCCTCCAGCAGCCTGGCTaGCTTCCGCCTCCGAGGCCGGGCATCAGTGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: WLRLRCSLQQPG*LPPPRPGISGP Trigger: GGGGCCACTGATGCCCGGCCTCGGAGGCGGAAGCCAGCCAGGCTGCTGGAGGCTACAGCGAAGCCGGAGCCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376980.8 |
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| CDS CCA 72 bp | GGCCTACACACAGCTGTAGAGGCAGCGCCCGGCGCCTaGGCTGCACAGTGGGTGAGGCTTCCCTTCGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: GLHTAVEAAPGA*AAQWVRLPFAS Trigger: TGAGGCGAAGGGAAGCCTCACCCACTGTGCAGCCCAGGCGCCGGGCGCTGCCTCTACAGCTGTGTGTAGGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376946.2 |
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| CDS CCA 72 bp | AAAGTCCTTCTGCCGCTTGGCTCTGGACTTCTCCTCTaGCTCCGGCTTCGCTGTAGCCTCCAGCAGCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: KVLLPLGSGLLL*LRLRCSLQQPG Trigger: GCCAGGCTGCTGGAGGCTACAGCGAAGCCGGAGCCAGAGGAGAAGTCCAGAGCCAAGCGGCAGAAGGACTTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376980.8 |
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| CDS CAA 90 bp | TCGCTGGACTCGTTTTGTTCTGCTATGTCAAAGTCCTTCTGCCGCTaGGCTCTGGACTTCTCCTCTGGCTCCGGCTTCGCTGTAGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: SLDSFCSAMSKSFCR*ALDFSSGSGFAVAS Trigger: GGAGGCTACAGCGAAGCCGGAGCCAGAGGAGAAGTCCAGAGCCAAGCGGCAGAAGGACTTTGACATAGCAGAACAAAACGAGTCCAGCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376980.8 |
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| CDS CAA 90 bp | GCGATACAGTCTTCCTTGCTCTTGGACGGGACACATCTGGCTATTTaGTCCCAGCGGTCAGAGGATCCCCTTGGGTACTGCTGCAACGCC | + |
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Preference number: 6 (lower is better) Translates to: AIQSSLLLDGTHLAI*SQRSEDPLGYCCNA Trigger: GGCGTTGCAGCAGTACCCAAGGGGATCCTCTGACCGCTGGGACAAAATAGCCAGATGTGTCCCGTCCAAGAGCAAGGAAGACTGTATCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376980.8 |
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| CDS CCA 72 bp | CGTTTTGTTCTGCTATGTCAAAGTCCTTCTGCCGCTTaGCTCTGGACTTCTCCTCTGGCTCCGGCTTCGCTG | + |
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Preference number: 6 (lower is better) Translates to: RFVLLCQSPSAA*LWTSPLAPASL Trigger: CAGCGAAGCCGGAGCCAGAGGAGAAGTCCAGAGCCAAGCGGCAGAAGGACTTTGACATAGCAGAACAAAACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376980.8 |
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| CDS CAA 72 bp | TCTTCCTTGCTCTTGGACGGGACACATCTGGCTATTTaGTCCCAGCGGTCAGAGGATCCCCTTGGGTACTGC | + |
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Preference number: 6 (lower is better) Translates to: SSLLLDGTHLAI*SQRSEDPLGYC Trigger: GCAGTACCCAAGGGGATCCTCTGACCGCTGGGACAAAATAGCCAGATGTGTCCCGTCCAAGAGCAAGGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376980.8 |
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| CDS CCA 72 bp | TCTGGCTATTTTGTCCCAGCGGTCAGAGGATCCCCTTaGGTACTGCTGCAACGCCAGTTCCAGAAGTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: SGYFVPAVRGSP*VLLQRQFQKFL Trigger: CAGAAACTTCTGGAACTGGCGTTGCAGCAGTACCCAAGGGGATCCTCTGACCGCTGGGACAAAATAGCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376980.8 |
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| CDS CCA 72 bp | CGATACAGTCTTCCTTGCTCTTGGACGGGACACATCTaGCTATTTTGTCCCAGCGGTCAGAGGATCCCCTTG | + |
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Preference number: 6 (lower is better) Translates to: RYSLPCSWTGHI*LFCPSGQRIPL Trigger: CAAGGGGATCCTCTGACCGCTGGGACAAAATAGCCAGATGTGTCCCGTCCAAGAGCAAGGAAGACTGTATCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376980.8 |
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| CDS CAA 72 bp | TCGTTTTGTTCTGCTATGTCAAAGTCCTTCTGCCGCTaGGCTCTGGACTTCTCCTCTGGCTCCGGCTTCGCT | + |
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Preference number: 6 (lower is better) Translates to: SFCSAMSKSFCR*ALDFSSGSGFA Trigger: AGCGAAGCCGGAGCCAGAGGAGAAGTCCAGAGCCAAGCGGCAGAAGGACTTTGACATAGCAGAACAAAACGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376980.8 |
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| CDS TCA 72 bp | ATGCATCCTGCTGCACCCCGAGGAACTGGTAGAAGTTaGGCTGCACCTCCTCCACTAAGTCAAACAACTCCA | + |
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Preference number: 6 (lower is better) Translates to: MHPAAPRGTGRS*AAPPPLSQTTP Trigger: TGGAGTTGTTTGACTTAGTGGAGGAGGTGCAGCTCAACTTCTACCAGTTCCTCGGGGTGCAGCAGGATGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000376946.2 ENST00000376980.8 ENST00000447548.5 ENST00000476103.3 |
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| CDS CAA 72 bp | ATCTGGCTATTTTGTCCCAGCGGTCAGAGGATCCCCTaGGGTACTGCTGCAACGCCAGTTCCAGAAGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: IWLFCPSGQRIP*GTAATPVPEVS Trigger: AGAAACTTCTGGAACTGGCGTTGCAGCAGTACCCAAGGGGATCCTCTGACCGCTGGGACAAAATAGCCAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376980.8 |
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| CDS TCA 72 bp | TTCGGAGAGTCTAACCATTCCTGGGGAGCAGGTCACTaGATCCTTCAGTTGCTTGGCTTTGGTTGTCACATC | + |
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Preference number: 6 (lower is better) Translates to: FGESNHSWGAGH*ILQLLGFGCHI Trigger: GATGTGACAACCAAAGCCAAGCAACTGAAGGATTCAGTGACCTGCTCCCCAGGAATGGTTAGACTCTCCGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000376980.8 ENST00000483085.1 |
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| CDS TCA 72 bp | GGCAAGGTGGTGGCCGTTTTGATGGGCCTGGAATTCTaGACTGTCGATTTGAGTTCGGAGAGTCTAACCATT | + |
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Preference number: 6 (lower is better) Translates to: GKVVAVLMGLEF*TVDLSSESLTI Trigger: AATGGTTAGACTCTCCGAACTCAAATCGACAGTTCAGAATTCCAGGCCCATCAAAACGGCCACCACCTTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000376980.8 ENST00000483085.1 |
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| CDS CCA 72 bp | ACCGAGCTCTCTCTTTTCTCAGGCTCTCCTCGTCGCTaGACTCGTTTTGTTCTGCTATGTCAAAGTCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: TELSLFSGSPRR*TRFVLLCQSPS Trigger: AGAAGGACTTTGACATAGCAGAACAAAACGAGTCCAGCGACGAGGAGAGCCTGAGAAAAGAGAGAGCTCGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376980.8 |
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| CDS CAA 90 bp | CAGGTGCCTAGAATTCAAGTCTCCCAACCTTTAGAGACCAGGATCTaGTCTCCCACTCTTCCCAAGATTATGCTCTCTCAGCAGAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: QVPRIQVSQPLETRI*SPTLPKIMLSQQRS Trigger: TGACCTCTGCTGAGAGAGCATAATCTTGGGAAGAGTGGGAGACAAGATCCTGGTCTCTAAAGGTTGGGAGACTTGAATTCTAGGCACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483085.1 |
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| CDS TCA 72 bp | CTTCCCAAGATTATGCTCTCTCAGCAGAGGTCACCATaGCTAATTGGGTGCTTGATTAACTTAACAAGTACT | + |
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Preference number: 6 (lower is better) Translates to: LPKIMLSQQRSP*LIGCLINLTST Trigger: AGTACTTGTTAAGTTAATCAAGCACCCAATTAGTCATGGTGACCTCTGCTGAGAGAGCATAATCTTGGGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483085.1 |
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