RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DNAJB8 (Homo sapiens)

Ensembl gene IDs: ENSG00000179407

Ensembl transcript IDs: ENST00000319153.3, ENST00000469083.1

Found 337 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 72 bp ATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTaGTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCA +
Preference number: 3 (lower is better)
Translates to: INHQAMSAAPRV*CPMHGGGGGKA
Trigger: TGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp TGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGGGTCTGTGGCCGTGGTaGGGGAGGCGGGCAAGGGCG +
Preference number: 4 (lower is better)
Translates to: CLRPHVFAAPCTVVVVGRGLWPW*GRRARA
Trigger: CGCCCTTGCCCGCCTCCCCCACCACGGCCACAGACC...CCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp CGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCAGGGCGCGCAGGGGCCCAGCTaGTCAGATGGACGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: RPHVFAAPCTVVVVGRQGAQGPS*SDGRGR
Trigger: TCTCCCCCGTCCATCTGACCAGCTGGGCCCCTGCGC...GCCCTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp CGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCAGGGCCCCCATGCACGGTGGTaGTGGTGGGAAGGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RPHVFAAPCTVVVVGRQGPHARW*WWEGRA
Trigger: GGCCCTGCCTTCCCACCACCACCACCGTGCATGGGG...GCCCTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR TCA 90 bp GGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCAGGGCCTGGCTGGGCAGCAGCTaGGGCAAGAGGAGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: GPTCLLPHARWWWWEGRAWLGSS*GKRRPR
Trigger: CCTTGGCCTCCTCTTGCCTCAGCTGCTGCCCAGCCA...GGCCCTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR GCA 90 bp CGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCAGGGCTGTTGGTGCTGCTGGTaGCGGGGACACCCGTGGTGG +
Preference number: 4 (lower is better)
Translates to: RPHVFAAPCTVVVVGRQGCWCCW*RGHPWW
Trigger: CCACCACGGGTGTCCCCGGCACCAGCAGCACCAACA...GCCCTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR CCA 90 bp CGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCAGGGCCGGGCAAGGGCGTCCTaGGTATGTCCACTCGGCCGA +
Preference number: 4 (lower is better)
Translates to: RPHVFAAPCTVVVVGRQGRARAS*VCPLGR
Trigger: TCGGCCGAGTGGACATACCCAGGACGCCCTTGCCCG...GCCCTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp CGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCAGGGCAAAGGTCTGTGGCCGTaGTGGGGGAGGCGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: RPHVFAAPCTVVVVGRQGKGLWP*WGRRAR
Trigger: CCTTGCCCGCCTCCCCCACCACGGCCACAGACCTTT...GCCCTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp CGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCAGGGCGCCCAGCTGGTCAGATaGACGGGGGAGAAGTGGCCG +
Preference number: 4 (lower is better)
Translates to: RPHVFAAPCTVVVVGRQGAQLVR*TGEKWP
Trigger: CGGCCACTTCTCCCCCGTCCATCTGACCAGCTGGGC...GCCCTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp GGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCAGGGCCGAAGGCAGGGCCGGGTaGCCAGCGCCTACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: GPTCLLPHARWWWWEGRAEGRAG*PAPTCC
Trigger: ACAGCAAGTAGGCGCTGGCCACCCGGCCCTGCCTTC...GGCCCTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp CGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCAGGGCCTGCCCCATGCACGGTaGTGGTGGTGGGAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: RPHVFAAPCTVVVVGRQGLPHAR*WWWEGR
Trigger: CCTGCCTTCCCACCACCACCACCGTGCATGGGGCAG...GCCCTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR GCA 90 bp ACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGGCTGTGGTAGGGCGTaGTGGCCCCGCCACCAGCCC +
Preference number: 4 (lower is better)
Translates to: TIRLCLRPHVFAAPCTVVGCGRA*WPRHQP
Trigger: GGGCTGGTGGCGGGGCCAGCACGCCCTACCACAGCC...CACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR GCA 90 bp CTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCAGACCTCCACGCGCTCCTaGCCGTTCTCCACGATGCGC +
Preference number: 4 (lower is better)
Translates to: LRPHVFAAPCTVVVVGRQTSTRS*PFSTMR
Trigger: GCGCATCGTGGAGAACGGGCAGGAGCGCGTGGAGGT...CTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR GCA 90 bp CTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCAGGCGGCCCCACGTGTTTaGTGCCCCATGCACGGTGGT +
Preference number: 4 (lower is better)
Translates to: LRPHVFAAPCTVVVVGRQAAPRV*CPMHGG
Trigger: ACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGC...CTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR GCA 90 bp GGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCAGGGCCGCACCTGCTGTCCCTTaGAGGCTTGTTCCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: GPTCLLPHARWWWWEGRAAPAVP*RLVPGA
Trigger: CGCCCCAGGAACAAGCCTGCAAGGGACAGCAGGTGC...GGCCCTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR CCA 90 bp CGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCAGGGCCACTCGGCCGATGGCTaGGCAGCAGCTGAGGCAAGA +
Preference number: 4 (lower is better)
Translates to: RPHVFAAPCTVVVVGRQGHSADG*AAAEAR
Trigger: TCTTGCCTCAGCTGCTGCCCAGCCATCGGCCGAGTG...GCCCTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp ATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGGGACACTGCCGCTGTaGGGCCAGGCCAGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: MSAAPRVCCPMHGGGGGKGTLPL*GQARVG
Trigger: GCCCACTCTGGCCTGGCCCCACAGCGGCAGTGTCCC...CTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp CGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCAGGGCCCTTCAGCAGGGGCCTaGCTGGACTCCGCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: RPHVFAAPCTVVVVGRQGPSAGA*LDSASS
Trigger: AGAGCTTGCGGAGTCCAGCCAGGCCCCTGCTGAAGG...GCCCTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp TGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCCTCCGGGGAAGCGCTaGCCTGCACGCCCAGCACTT +
Preference number: 4 (lower is better)
Translates to: CLRPHVFAAPCTVVVVGRPPGKR*PARPAL
Trigger: AAGTGCTGGGCGTGCAGGCCAGCGCTTCCCCGGAGG...CCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp ATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGTGTGGTAGGGCGTGCTaGCCCCGCCACCAGCCCGCC +
Preference number: 4 (lower is better)
Translates to: IRLCLRPHVFAAPCTVVVCGRAC*PRHQPA
Trigger: GGCGGGCTGGTGGCGGGGCCAGCACGCCCTACCACA...CACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp GGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCAGGGCCAGGTGGATGAGAAGGTaGTGTGGCTGCCCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: GPTCLLPHARWWWWEGRARWMRR*CGCPRC
Trigger: GCAGCGGGGGCAGCCACACCACCTTCTCATCCACCT...GGCCCTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR TCA 90 bp CTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAGCCTGCCCCTGCTGGTaGGGTGGCCACAACGGTGTG +
Preference number: 4 (lower is better)
Translates to: LCLRPHVFAAPCTVVVVGACPCW*GGHNGV
Trigger: CACACCGTTGTGGCCACCTCACCAGCAGGGGCAGGC...TCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp TGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGGTGACCCAGGTGGTGTaGGCTGAGTCCCGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: CLRPHVFAAPCTVVVVGRVTQVV*AESREP
Trigger: TGGCTCCCGGGACTCAGCCCACACCACCTGGGTCAC...CCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp CTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCAGCCTTCAGCAGGGGCCTaGCTGGACTCCGCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: LRPHVFAAPCTVVVVGRQPSAGA*LDSASS
Trigger: AGAGCTTGCGGAGTCCAGCCAGGCCCCTGCTGAAGG...CTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp CTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAAGTGGCCGGTGGTCTaGGGCCCTTCAGCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: LCLRPHVFAAPCTVVVVGKWPVV*GPSAGA
Trigger: GGCCCCTGCTGAAGGGCCCCAGACCACCGGCCACTT...TCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp TGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGGAAGGCAGGGCCGGGTaGCCAGCGCCTACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: CLRPHVFAAPCTVVVVGREGRAG*PAPTCC
Trigger: ACAGCAAGTAGGCGCTGGCCACCCGGCCCTGCCTTC...CCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR TCA 90 bp CTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGTGGTGGGTCTGGCTaGGGCAGACCCGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: LCLRPHVFAAPCTVVVVGSGGSG*GRPGGG
Trigger: ACCACCACCGGGTCTGCCTCAGCCAGACCCACCACT...TCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319153.3
CDS-3UTR TCA 90 bp CGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCAGGGCTCCAGCCTTGGTGAGTaGCAAAGGTCTGTGGCCGTG +
Preference number: 4 (lower is better)
Translates to: RPHVFAAPCTVVVVGRQGSSLGE*QRSVAV
Trigger: CACGGCCACAGACCTTTGTCACTCACCAAGGCTGGA...GCCCTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR GCA 90 bp CTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCAGGTCACCGACTTGAGCTaGCCGTCTTCCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: LRPHVFAAPCTVVVVGRQVTDLS*PSSSTS
Trigger: GGAGGTGGAGGAAGACGGGCAGCTCAAGTCGGTGAC...CTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp CTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCAGAGAGAGCCGCTCACCTaGGAGCTGCAGGTGAGCATC +
Preference number: 4 (lower is better)
Translates to: LRPHVFAAPCTVVVVGRQREPLT*ELQVSI
Trigger: GATGCTCACCTGCAGCTCCCAGGTGAGCGGCTCTCT...CTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp CTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAGTGACCCAGGTGGTGTaGGCTGAGTCCCGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: LCLRPHVFAAPCTVVVVGVTQVV*AESREP
Trigger: TGGCTCCCGGGACTCAGCCCACACCACCTGGGTCAC...TCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp CTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAGCCCAGCTGGTCAGATaGACGGGGGAGAAGTGGCCG +
Preference number: 4 (lower is better)
Translates to: LCLRPHVFAAPCTVVVVGAQLVR*TGEKWP
Trigger: CGGCCACTTCTCCCCCGTCCATCTGACCAGCTGGGC...TCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp ATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGCGCAGGGGCCCAGCTaGTCAGATGGACGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: IRLCLRPHVFAAPCTVVVAQGPS*SDGRGR
Trigger: TCTCCCCCGTCCATCTGACCAGCTGGGCCCCTGCGC...CACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp TTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGTGTGGTAGGGCGTGCTaGCCCCGCCACCAGCCCGCC +
Preference number: 4 (lower is better)
Translates to: LTIRLCLRPHVFAAPCTVCGRAC*PRHQPA
Trigger: GGCGGGCTGGTGGCGGGGCCAGCACGCCCTACCACA...CACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp CTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAGATGAGAAGGTGGTGTaGCTGCCCCCGCTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: LCLRPHVFAAPCTVVVVGDEKVV*LPPLQP
Trigger: GGGCTGCAGCGGGGGCAGCCACACCACCTTCTCATC...TCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp ATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGCATGCACGGTGGTGGTaGTGGGAAGGCAGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: IRLCLRPHVFAAPCTVVVHARWW*WEGRAG
Trigger: CCCGGCCCTGCCTTCCCACCACCACCACCGTGCATG...CACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp ATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGCTGCCCCATGCACGGTaGTGGTGGTGGGAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: MSAAPRVCCPMHGGGGGKLPHAR*WWWEGR
Trigger: CCTGCCTTCCCACCACCACCACCGTGCATGGGGCAG...CTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR TCA 90 bp AACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGCCTGCCCCTGCTGGTaGGGTGGCCACAACGGTGTG +
Preference number: 4 (lower is better)
Translates to: NHQAMSAAPRVCCPMHGGACPCW*GGHNGV
Trigger: CACACCGTTGTGGCCACCTCACCAGCAGGGGCAGGC...ACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR TCA 90 bp CGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCAGGGCCCTCAGACACCAGCTTaGACTTCTTCTCCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: RPHVFAAPCTVVVVGRQGPQTPA*TSSPPP
Trigger: AGGAGGCGGAGAAGAAGTTCAAGCTGGTGTCTGAGG...GCCCTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR TCA 90 bp TGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGGTGGACATGCTGGTGTaGGTGCCGATGGCGATGGTG +
Preference number: 4 (lower is better)
Translates to: CLRPHVFAAPCTVVVVGRVDMLV*VPMAMV
Trigger: CACCATCGCCATCGGCACTCACACCAGCATGTCCAC...CCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR GCA 90 bp CGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCAGGGCCTCGGGGCAATCTTCTaGGAAGACCCTGCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: RPHVFAAPCTVVVVGRQGLGAIF*EDPASE
Trigger: CTCAGAAGCAGGGTCTTCGCAGAAGATTGCCCCGAG...GCCCTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR GCA 90 bp ACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGCGGCCCCACGTGTTTaGTGCCCCATGCACGGTGGT +
Preference number: 4 (lower is better)
Translates to: TIRLCLRPHVFAAPCTVVAAPRV*CPMHGG
Trigger: ACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGC...CACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp ACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGGGGTTCAGGCAGGCTaGGGTGGGGACAAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: TIRLCLRPHVFAAPCTVVGVQAG*GGDKSL
Trigger: CAGGCTCTTGTCCCCACCCCAGCCTGCCTGAACCCC...CACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp CTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAAGAGGAGGCCAAGGTaGGGTTCAGGCAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LCLRPHVFAAPCTVVVVGKRRPR*GSGRLG
Trigger: CCCCAGCCTGCCTGAACCCCACCTTGGCCTCCTCTT...TCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp ACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGCGGGCAAGGGCGTCCTaGGTATGTCCACTCGGCCGA +
Preference number: 4 (lower is better)
Translates to: TIRLCLRPHVFAAPCTVVRARAS*VCPLGR
Trigger: TCGGCCGAGTGGACATACCCAGGACGCCCTTGCCCG...CACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp CTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGACCCCTGCTGGTGAGGTaGCCACAACGGTGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: LCLRPHVFAAPCTVVVVGPLLVR*PQRCVG
Trigger: TCCCACACACCGTTGTGGCCACCTCACCAGCAGGGG...TCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp TTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGGGACACTGCCGCTGTaGGGCCAGGCCAGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: LTIRLCLRPHVFAAPCTVGTLPL*GQARVG
Trigger: GCCCACTCTGGCCTGGCCCCACAGCGGCAGTGTCCC...CACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp AACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTTGGACGGGGGAGAAGTaGCCGGTGGTCTGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: NHQAMSAAPRVCCPMHGGWTGEK*PVVWGP
Trigger: AGGGCCCCAGACCACCGGCCACTTCTCCCCCGTCCA...ACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR TCA 90 bp CTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCAGCCTGGGAGCTGCAGGTaGGCATCTCGATTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: LRPHVFAAPCTVVVVGRQPGSCR*ASRFLV
Trigger: AACAAGGAATCGAGATGCTCACCTGCAGCTCCCAGG...CTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR TCA 90 bp CTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCAGGGATTCCAGCCTTGGTaGGTGACAAAGGTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LRPHVFAAPCTVVVVGRQGFQPW*VTKVCG
Trigger: GCCACAGACCTTTGTCACTCACCAAGGCTGGAATCC...CTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR TCA 90 bp TTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGCCAGGTGGTGTGGGCTaGGTCCCGGGAGCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: LTIRLCLRPHVFAAPCTVPGGVG*VPGAKG
Trigger: CCCTTTGGCTCCCGGGACTCAGCCCACACCACCTGG...CACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR TCA 90 bp GGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCAGGGCCCAGCATGTTGAAGGATaGGAAGGCCTCCATGAAGGC +
Preference number: 4 (lower is better)
Translates to: GPTCLLPHARWWWWEGRAQHVEG*EGLHEG
Trigger: GCCTTCATGGAGGCCTTCTCATCCTTCAACATGCTG...GGCCCTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR TCA 90 bp GGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCAGGGCCTCGGCTATACCACAGTaGCAGCTTCCACCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: GPTCLLPHARWWWWEGRASAIPQ*QLPPLS
Trigger: ACTGAGAGGTGGAAGCTGTCACTGTGGTATAGCCGA...GGCCCTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR TCA 90 bp CTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGACTGCACAGTTCTCCATaGTGGCGGTGGCAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: LCLRPHVFAAPCTVVVVGLHSSP*WRWQWE
Trigger: CTCCCACTGCCACCGCCATCATGGAGAACTGTGCAG...TCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR GCA 90 bp CTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAGGGTTCTTGTCGGGGTaGCAACGAAGGGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: LCLRPHVFAAPCTVVVVGGFLSG*QRRASL
Trigger: CAAGCTGGCCCTTCGTTGGCACCCCGACAAGAACCC...TCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR GCA 90 bp TTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGGCTGTGGTAGGGCGTaGTGGCCCCGCCACCAGCCC +
Preference number: 4 (lower is better)
Translates to: LLTIRLCLRPHVFAAPCTGCGRA*WPRHQP
Trigger: GGGCTGGTGGCGGGGCCAGCACGCCCTACCACAGCC...CGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp CTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCAGGGATGGGGAGCTTCCTaGAATACCGTGAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: LRPHVFAAPCTVVVVGRQGWGAS*NTVSSS
Trigger: TGAGGAGCTCACGGTATTCCAGGAAGCTCCCCATCC...CTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp ATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGAAGAGGAGGCCAAGGTaGGGTTCAGGCAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: IRLCLRPHVFAAPCTVVVKRRPR*GSGRLG
Trigger: CCCCAGCCTGCCTGAACCCCACCTTGGCCTCCTCTT...CACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp AACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTAAAGGTCTGTGGCCGTaGTGGGGGAGGCGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: NHQAMSAAPRVCCPMHGGKGLWP*WGRRAR
Trigger: CCTTGCCCGCCTCCCCCACCACGGCCACAGACCTTT...ACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp ACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGAGTGACAAAGGTCTGTaGCCGTGGTGGGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: TIRLCLRPHVFAAPCTVVSDKGL*PWWGRR
Trigger: CCGCCTCCCCCACCACGGCCACAGACCTTTGTCACT...CACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp TTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGAAGTGGCCGGTGGTCTaGGGCCCTTCAGCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: LTIRLCLRPHVFAAPCTVKWPVV*GPSAGA
Trigger: GGCCCCTGCTGAAGGGCCCCAGACCACCGGCCACTT...CACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp TTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGTGGACGGGGGAGAAGTaGCCGGTGGTCTGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: LTIRLCLRPHVFAAPCTVWTGEK*PVVWGP
Trigger: AGGGCCCCAGACCACCGGCCACTTCTCCCCCGTCCA...CACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR TCA 90 bp TGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCCTGGGAGCTGCAGGTaGGCATCTCGATTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: CLRPHVFAAPCTVVVVGRPGSCR*ASRFLV
Trigger: AACAAGGAATCGAGATGCTCACCTGCAGCTCCCAGG...CCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR TCA 90 bp CTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGACACACAGCGAGTCAGTaGGGGAGGGGATGTGAAACC +
Preference number: 4 (lower is better)
Translates to: LCLRPHVFAAPCTVVVVGHTASQ*GRGCET
Trigger: GGTTTCACATCCCCTCCCTCACTGACTCGCTGTGTG...TCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR TCA 90 bp CTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCAGCACCACGGTCACTATTaGATGGGCTGTCCCAGAACT +
Preference number: 4 (lower is better)
Translates to: LRPHVFAAPCTVVVVGRQHHGHY*MGCPRT
Trigger: AGTTCTGGGACAGCCCATTCAATAGTGACCGTGGTG...CTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR TCA 90 bp CTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAACGACATCACCGACTTaGACCCCGAGCTGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: LCLRPHVFAAPCTVVVVGTTSPT*TPSCQN
Trigger: GTTCTGGCAGCTCGGGGTTCAAGTCGGTGATGTCGT...TCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR TCA 90 bp TTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGGGGGTGCCGAGGGGTaGGAAGGACACAGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: LTIRLCLRPHVFAAPCTVGGAEG*EGHSGG
Trigger: TCCACCACTGTGTCCTTCTCACCCCTCGGCACCCCC...CACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR TCA 90 bp TGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCACACCCCTCTCTCATaGCAGTGCCACTCAGAGACA +
Preference number: 4 (lower is better)
Translates to: CLRPHVFAAPCTVVVVGRHTPLS*QCHSET
Trigger: TGTCTCTGAGTGGCACTGTCATGAGAGAGGGGTGTG...CCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR GCA 90 bp GGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCAGGGCCGACAATGGTGAGCTTTaGAACAGCTCGGGGCAATCT +
Preference number: 4 (lower is better)
Translates to: GPTCLLPHARWWWWEGRADNGEL*NSSGQS
Trigger: AGATTGCCCCGAGCTGTTGCAAAGCTCACCATTGTC...GGCCCTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR GCA 90 bp CTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCAGGAAAAGAGAGGCCGTTaGAGGCAGGTGACAATGGTG +
Preference number: 4 (lower is better)
Translates to: LRPHVFAAPCTVVVVGRQEKRGR*RQVTMV
Trigger: CACCATTGTCACCTGCCTGCAACGGCCTCTCTTTTC...CTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR GCA 90 bp TTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGGAGGGGAGGGACACTaGCGCTGTGGGGCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: LLTIRLCLRPHVFAAPCTGGEGH*RCGARP
Trigger: TGGCCTGGCCCCACAGCGGCAGTGTCCCTCCCCTCC...CGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR GCA 90 bp ACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGGGTTCTTGTCGGGGTaGCAACGAAGGGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: TIRLCLRPHVFAAPCTVVGFLSG*QRRASL
Trigger: CAAGCTGGCCCTTCGTTGGCACCCCGACAAGAACCC...CACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR GCA 90 bp ATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGTTTGCTGCCCCATaGACGGTGGTGGTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: IRLCLRPHVFAAPCTVVVVFAAP*TVVVVG
Trigger: TCCCACCACCACCACCGTGCATGGGGCAGCAAACAC...CACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR GCA 90 bp GGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCAGGGCCGAAAGATGCTTGCCCTaGACAGTTCTCCATGATGGC +
Preference number: 4 (lower is better)
Translates to: GPTCLLPHARWWWWEGRAERCLP*TVLHDG
Trigger: GCCATCATGGAGAACTGTGCAGGGCAAGCATCTTTC...GGCCCTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR CCA 90 bp GGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCAGGGCCCCGTCGGTAAACTCTTaGATGAACCAGGCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: GPTCLLPHARWWWWEGRAPSVNS*MNQAQR
Trigger: TCTCTGAGCCTGGTTCATCCAAGAGTTTACCGACGG...GGCCCTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp TTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGGGGTTCAGGCAGGCTaGGGTGGGGACAAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: LTIRLCLRPHVFAAPCTVGVQAG*GGDKSL
Trigger: CAGGCTCTTGTCCCCACCCCAGCCTGCCTGAACCCC...CACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp ATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGCTCACCAGGCAAACCTaGGCATATGGGCCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: IRLCLRPHVFAAPCTVVVLTRQT*AYGPAP
Trigger: AGGGGCAGGCCCATATGCCCAGGTTTGCCTGGTGAG...CACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp TTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGCAGCAGGGGCCTGGCTaGACTCCGCAAGCTCTAGGC +
Preference number: 4 (lower is better)
Translates to: LTIRLCLRPHVFAAPCTVQQGPG*TPQALG
Trigger: GCCTAGAGCTTGCGGAGTCCAGCCAGGCCCCTGCTG...CACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp TTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGGGAGAAGTGGCCGGTaGTCTGGGGCCCTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LTIRLCLRPHVFAAPCTVGRSGR*SGALQQ
Trigger: CTGCTGAAGGGCCCCAGACCACCGGCCACTTCTCCC...CACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp TTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGATGAGAAGGTGGTGTaGCTGCCCCCGCTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: LTIRLCLRPHVFAAPCTVDEKVV*LPPLQP
Trigger: GGGCTGCAGCGGGGGCAGCCACACCACCTTCTCATC...CACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp CGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCAGGGCTCTTGCTGCATCCCATaGTCAAGGCCAGTATCCATG +
Preference number: 4 (lower is better)
Translates to: RPHVFAAPCTVVVVGRQGSCCIP*SRPVSM
Trigger: CATGGATACTGGCCTTGACCATGGGATGCAGCAAGA...GCCCTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR TCA 90 bp ATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGCGATTCCTTGTTCCCTaGCCGCTGGTCCCAGACTGT +
Preference number: 4 (lower is better)
Translates to: IRLCLRPHVFAAPCTVVVRFLVP*PLVPDC
Trigger: ACAGTCTGGGACCAGCGGTCAGGGAACAAGGAATCG...CACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR TCA 90 bp GGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCAGGGCCCAATTCTACACCTGCTaGCACATGTGGCTTAGCAGA +
Preference number: 4 (lower is better)
Translates to: GPTCLLPHARWWWWEGRAQFYTC*HMWLSR
Trigger: TCTGCTAAGCCACATGTGTCAGCAGGTGTAGAATTG...GGCCCTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR TCA 90 bp CTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGACCTCAGACACCAGCTTaGACTTCTTCTCCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LCLRPHVFAAPCTVVVVGPQTPA*TSSPPP
Trigger: AGGAGGCGGAGAAGAAGTTCAAGCTGGTGTCTGAGG...TCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR TCA 90 bp ATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGTGCAGCCCAGCATGTTaGAGGATGAGAAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: MSAAPRVCCPMHGGGGGKCSPAC*RMRRPP
Trigger: TGGAGGCCTTCTCATCCTTCAACATGCTGGGCTGCA...CTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR GCA 90 bp ATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGCCATCAGGCTATGTCTaGGGCCCCACGTGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: IRLCLRPHVFAAPCTVVVPSGYV*GPTCLL
Trigger: CAGCAAACACGTGGGGCCGCAGACATAGCCTGATGG...CACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR GCA 90 bp TTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGTGGGAGCAGTGTTGGTaGTGCTGGTGCCGGGGACAC +
Preference number: 4 (lower is better)
Translates to: LTIRLCLRPHVFAAPCTVWEQCW*CWCRGH
Trigger: GTGTCCCCGGCACCAGCAGCACCAACACTGCTCCCA...CACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR GCA 90 bp ATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGTGTGGCAGTCTTGCTaGATCCCATGGTCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: MSAAPRVCCPMHGGGGGKVWQSC*IPWSRP
Trigger: TGGCCTTGACCATGGGATGCAGCAAGACTGCCACAC...CTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR CCA 90 bp ACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGACATCAGGAAGGCATTaGAGGGGCAGTGGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: TIRLCLRPHVFAAPCTVVTSGRH*RGSGGG
Trigger: GCCACCACCACTGCCCCTCCAATGCCTTCCTGATGT...CACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319153.3
CDS-3UTR CCA 90 bp TTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGCACTCGGCCGATGGCTaGGCAGCAGCTGAGGCAAGA +
Preference number: 4 (lower is better)
Translates to: LTIRLCLRPHVFAAPCTVHSADG*AAAEAR
Trigger: TCTTGCCTCAGCTGCTGCCCAGCCATCGGCCGAGTG...CACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp AACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTAGCCCCCGAAGGAGGTaGATGAGAAGGTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: NHQAMSAAPRVCCPMHGGSPRRR*MRRWCG
Trigger: GCCACACCACCTTCTCATCCACCTCCTTCGGGGGCT...ACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR TCA 90 bp AACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTACGACATCACCGACTTaGACCCCGAGCTGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: NHQAMSAAPRVCCPMHGGTTSPT*TPSCQN
Trigger: GTTCTGGCAGCTCGGGGTTCAAGTCGGTGATGTCGT...ACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR GCA 90 bp TGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGTTAGCAGTTAGCACCTaGTGTCCCTTGCAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: CLRPHVFAAPCTVVVVGRLAVST*CPLQAC
Trigger: ACAAGCCTGCAAGGGACAGCAGGTGCTAACTGCTAA...CCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR GCA 90 bp ACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGAACCAGGGCCAAGGCTaGAGCGGACAGCAAATCCAA +
Preference number: 4 (lower is better)
Translates to: TIRLCLRPHVFAAPCTVVNQGQG*SGQQIQ
Trigger: TTGGATTTGCTGTCCGCTGCAGCCTTGGCCCTGGTT...CACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR GCA 90 bp AACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTCAGGCCAGAGTGGGCTaGCCTCCAGAGCTCCTTTTA +
Preference number: 4 (lower is better)
Translates to: NHQAMSAAPRVCCPMHGGQARVG*PPELLL
Trigger: TAAAAGGAGCTCTGGAGGGCAGCCCACTCTGGCCTG...ACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR GCA 90 bp TGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGTCCATCCATTTGAGCTaGTCCTTGCCGTTCACAGTC +
Preference number: 4 (lower is better)
Translates to: CLRPHVFAAPCTVVVVGRSIHLS*SLPFTV
Trigger: GACTGTGAACGGCAAGGAGCAGCTCAAATGGATGGA...CCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR GCA 90 bp TTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGCCTACAGGCAGCTaGCAGGGCCCCACCTCCCAT +
Preference number: 4 (lower is better)
Translates to: LLTIRLCLRPHVFAAPCTVPTGS*QGPTSH
Trigger: ATGGGAGGTGGGGCCCTGGCAGCTGCCTGTAGGCAC...CGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR CCA 90 bp TTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGAGAGAGCCGCTCACCTaGGAGCTGCAGGTGAGCATC +
Preference number: 4 (lower is better)
Translates to: LTIRLCLRPHVFAAPCTVREPLT*ELQVSI
Trigger: GATGCTCACCTGCAGCTCCCAGGTGAGCGGCTCTCT...CACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp TTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACCATGCACGGTGGTGGTaGTGGGAAGGCAGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: FINHQAMSAAPRVCCPMHHARWW*WEGRAG
Trigger: CCCGGCCCTGCCTTCCCACCACCACCACCGTGCATG...GTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp ATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGTGAGAAGGACACAGTaGTGGACATGCTGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: MSAAPRVCCPMHGGGGGKVRRTQ*WTCWCE
Trigger: CTCACACCAGCATGTCCACCACTGTGTCCTTCTCAC...CTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR CCA 90 bp ATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGAGACAGCAGGAACTTaGGCTGCCTCTGAAAGCTTC +
Preference number: 4 (lower is better)
Translates to: MSAAPRVCCPMHGGGGGKETAGT*AASESF
Trigger: GAAGCTTTCAGAGGCAGCCCAAGTTCCTGCTGTCTC...CTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR CCA 90 bp ATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGAGCGAGCCTTTGTTGTaGTTGGCAGTGATGGTGCAG +
Preference number: 4 (lower is better)
Translates to: MSAAPRVCCPMHGGGGGKSEPLL*LAVMVQ
Trigger: CTGCACCATCACTGCCAACCACAACAAAGGCTCGCT...CTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR TCA 90 bp CTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGATCCTTGGTACACATTTaGGGGCTGTGTACTGTGAGG +
Preference number: 4 (lower is better)
Translates to: LCLRPHVFAAPCTVVVVGSLVHI*GLCTVR
Trigger: CCTCACAGTACACAGCCCTCAAATGTGTACCAAGGA...TCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319153.3
CDS-3UTR TCA 90 bp ATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGCAGCATGTTGAAGGATaGGAAGGCCTCCATGAAGGC +
Preference number: 4 (lower is better)
Translates to: IRLCLRPHVFAAPCTVVVQHVEG*EGLHEG
Trigger: GCCTTCATGGAGGCCTTCTCATCCTTCAACATGCTG...CACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR TCA 90 bp ATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGAACTTGGGCTGCCTCTaGAAGCTTCTGTTGGGCCAT +
Preference number: 4 (lower is better)
Translates to: IRLCLRPHVFAAPCTVVVNLGCL*KLLLGH
Trigger: ATGGCCCAACAGAAGCTTTCAGAGGCAGCCCAAGTT...CACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR GCA 90 bp CACTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGGAGGGGAGGGACACTaGCGCTGTGGGGCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: HLAHLLTIRLCLRPHVFAGGEGH*RCGARP
Trigger: TGGCCTGGCCCCACAGCGGCAGTGTCCCTCCCCTCC...AGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR GCA 90 bp ACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGATGTGTGGCAGTCTTaGTGCATCCCATGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: TIRLCLRPHVFAAPCTVVDVWQS*CIPWSR
Trigger: CCTTGACCATGGGATGCAGCAAGACTGCCACACATC...CACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR GCA 90 bp CGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCAGGGCCAGCAGCAAGGCTTGTaGTTGAGAGTAATTGATGAT +
Preference number: 4 (lower is better)
Translates to: RPHVFAAPCTVVVVGRQGQQQGL*LRVIDD
Trigger: ATCATCAATTACTCTCAAGCACAAGCCTTGCTGCTG...GCCCTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR CCA 90 bp TTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCTCCGGGGAAGCGCTaGCCTGCACGCCCAGCACTT +
Preference number: 4 (lower is better)
Translates to: LAHLLTIRLCLRPHVFAAPPGKR*PARPAL
Trigger: AAGTGCTGGGCGTGCAGGCCAGCGCTTCCCCGGAGG...GGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp CTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCAGACGGTCACTATTGAATaGGCTGTCCCAGAACTCAAA +
Preference number: 4 (lower is better)
Translates to: LRPHVFAAPCTVVVVGRQTVTIE*AVPELK
Trigger: TTTGAGTTCTGGGACAGCCCATTCAATAGTGACCGT...CTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp ATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGTTGGTGGTGACCTTGTaGCCATTGATCATCTCGGTG +
Preference number: 4 (lower is better)
Translates to: MSAAPRVCCPMHGGGGGKLVVTL*PLIISV
Trigger: CACCGAGATGATCAATGGCCACAAGGTCACCACCAA...CTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp ATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGTTGGGCCATGATGTGTaGCAGTCTTGCTGCATCCCA +
Preference number: 4 (lower is better)
Translates to: IRLCLRPHVFAAPCTVVVLGHDV*QSCCIP
Trigger: TGGGATGCAGCAAGACTGCCACACATCATGGCCCAA...CACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR TCA 90 bp TTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGTGAGGGAGGGGATGTaGAACCAGGGCCAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: FINHQAMSAAPRVCCPMHVREGM*NQGQGC
Trigger: GCAGCCTTGGCCCTGGTTTCACATCCCCTCCCTCAC...GTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR TCA 90 bp CATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCCCCGAAGGAGGTGGATaGGAAGGTGGTGTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: HLLTIRLCLRPHVFAAPCPEGGG*EGGVAA
Trigger: GGCAGCCACACCACCTTCTCATCCACCTCCTTCGGG...GCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR GCA 90 bp ATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGACAATGGTGAGCTTTaGAACAGCTCGGGGCAATCT +
Preference number: 4 (lower is better)
Translates to: IRLCLRPHVFAAPCTVVVDNGEL*NSSGQS
Trigger: AGATTGCCCCGAGCTGTTGCAAAGCTCACCATTGTC...CACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR GCA 90 bp CTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGACTTCCATGGTCTCCTTaGATCCTGGAGAAATCTGAG +
Preference number: 4 (lower is better)
Translates to: LCLRPHVFAAPCTVVVVGLPWSP*ILEKSE
Trigger: CTCAGATTTCTCCAGGATGCAAGGAGACCATGGAAG...TCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR GCA 90 bp CTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCACCTCCACGCGCTCCTaGCCGTTCTCCACGATGCGC +
Preference number: 4 (lower is better)
Translates to: LGTFINHQAMSAAPRVCCTSTRS*PFSTMR
Trigger: GCGCATCGTGGAGAACGGGCAGGAGCGCGTGGAGGT...GCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp CTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCAGGCAGTGGTGGGTCTaGCTGAGGCAGACCCGGTGG +
Preference number: 4 (lower is better)
Translates to: LGTFINHQAMSAAPRVCCRQWWV*LRQTRW
Trigger: CCACCGGGTCTGCCTCAGCCAGACCCACCACTGCCT...GCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319153.3
CDS-3UTR CCA 90 bp TTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACCCCTGTCTAGGACAGTaGCTGGCACACGAGGGCCGT +
Preference number: 4 (lower is better)
Translates to: FINHQAMSAAPRVCCPMHPCLGQ*LAHEGR
Trigger: ACGGCCCTCGTGTGCCAGCCACTGTCCTAGACAGGG...GTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp TTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACAGTGACAAAGGTCTGTaGCCGTGGTGGGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: FINHQAMSAAPRVCCPMHSDKGL*PWWGRR
Trigger: CCGCCTCCCCCACCACGGCCACAGACCTTTGTCACT...GTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp TTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCGGGAGAAGTGGCCGGTaGTCTGGGGCCCTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LAHLLTIRLCLRPHVFAAGRSGR*SGALQQ
Trigger: CTGCTGAAGGGCCCCAGACCACCGGCCACTTCTCCC...GGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp CATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCAGGTGGATGAGAAGGTaGTGTGGCTGCCCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: HLLTIRLCLRPHVFAAPCRWMRR*CGCPRC
Trigger: GCAGCGGGGGCAGCCACACCACCTTCTCATCCACCT...GCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp TCACTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCCCCCATGCACGGTGGTaGTGGTGGGAAGGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SLGTFINHQAMSAAPRVCPHARW*WWEGRA
Trigger: GGCCCTGCCTTCCCACCACCACCACCGTGCATGGGG...GCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp CATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCTGCTGGGAGCAGTGTTaGTGCTGCTGGTGCCGGGGA +
Preference number: 4 (lower is better)
Translates to: HLLTIRLCLRPHVFAAPCCWEQC*CCWCRG
Trigger: TCCCCGGCACCAGCAGCACCAACACTGCTCCCAGCA...GCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR TCA 90 bp ACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGAGAGAAAGCAGATGGTaGCATCAGGAAGGCATTGGA +
Preference number: 4 (lower is better)
Translates to: TIRLCLRPHVFAAPCTVVRESRW*HQEGIG
Trigger: TCCAATGCCTTCCTGATGTCACCATCTGCTTTCTCT...CACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319153.3
CDS-3UTR TCA 90 bp TTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGCGATTCCTTGTTCCCTaGCCGCTGGTCCCAGACTGT +
Preference number: 4 (lower is better)
Translates to: LLTIRLCLRPHVFAAPCTRFLVP*PLVPDC
Trigger: ACAGTCTGGGACCAGCGGTCAGGGAACAAGGAATCG...CGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR TCA 90 bp TTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGCTTCCTGGAATACCGTaGGCTCCTCAGCAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: LLTIRLCLRPHVFAAPCTLPGIP*APQQLP
Trigger: TGGGAGCTGCTGAGGAGCTCACGGTATTCCAGGAAG...CGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR TCA 90 bp TTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCGTGAGGGAGGGGATGTaGAACCAGGGCCAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: LAHLLTIRLCLRPHVFAAVREGM*NQGQGC
Trigger: GCAGCCTTGGCCCTGGTTTCACATCCCCTCCCTCAC...GGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR TCA 90 bp CACTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTTGGCTGGGCAGCAGCTaGGGCAAGAGGAGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: HLAHLLTIRLCLRPHVFAWLGSS*GKRRPR
Trigger: CCTTGGCCTCCTCTTGCCTCAGCTGCTGCCCAGCCA...AGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR TCA 90 bp TTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCAGAGCTCCTTTTATaGCGTCAGCTCCCGGGGCGG +
Preference number: 4 (lower is better)
Translates to: LAHLLTIRLCLRPHVFAAPELLL*RQLPGR
Trigger: CCGCCCCGGGAGCTGACGTCATAAAAGGAGCTCTGG...GGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR TCA 90 bp TTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCCGAAGGAGGTGGATaGGAAGGTGGTGTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LAHLLTIRLCLRPHVFAAPEGGG*EGGVAA
Trigger: GGCAGCCACACCACCTTCTCATCCACCTCCTTCGGG...GGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR TCA 90 bp TTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGTCACAGTCACCGACTTaGGCTGCCCGTCTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LLTIRLCLRPHVFAAPCTSQSPT*AARLPP
Trigger: TGGAGGAAGACGGGCAGCTCAAGTCGGTGACTGTGA...CGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR GCA 90 bp CTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCGCCCCACGTGTTTGCTaGCCCATGCACGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: LGTFINHQAMSAAPRVCCAPRVC*PMHGGG
Trigger: ACCACCACCGTGCATGGGGCAGCAAACACGTGGGGC...GCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR GCA 90 bp TCACTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCGAGCAGTGTTGGTGCTaGTGGTGCCGGGGACACCCG +
Preference number: 4 (lower is better)
Translates to: SLGTFINHQAMSAAPRVCEQCWC*WCRGHP
Trigger: CGGGTGTCCCCGGCACCAGCAGCACCAACACTGCTC...GCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR CCA 90 bp CTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCTGTCTAGGACAGTaGCTGGCACACGAGGGCCGT +
Preference number: 4 (lower is better)
Translates to: LGTFINHQAMSAAPRVCCPCLGQ*LAHEGR
Trigger: ACGGCCCTCGTGTGCCAGCCACTGTCCTAGACAGGG...GCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp AACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTTTGGTGGTGACCTTGTaGCCATTGATCATCTCGGTG +
Preference number: 4 (lower is better)
Translates to: NHQAMSAAPRVCCPMHGGLVVTL*PLIISV
Trigger: CACCGAGATGATCAATGGCCACAAGGTCACCACCAA...ACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp TTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGCAGTGGTGGACATGCTaGTGTGAGTGCCGATGGCGA +
Preference number: 4 (lower is better)
Translates to: LLTIRLCLRPHVFAAPCTQWWTC*CECRWR
Trigger: TCGCCATCGGCACTCACACCAGCATGTCCACCACTG...CGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR TCA 90 bp CATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCCTTCCTGGAATACCGTaGGCTCCTCAGCAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: HLLTIRLCLRPHVFAAPCLPGIP*APQQLP
Trigger: TGGGAGCTGCTGAGGAGCTCACGGTATTCCAGGAAG...GCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR TCA 90 bp TTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACCACACAGCGAGTCAGTaGGGGAGGGGATGTGAAACC +
Preference number: 4 (lower is better)
Translates to: FINHQAMSAAPRVCCPMHHTASQ*GRGCET
Trigger: GGTTTCACATCCCCTCCCTCACTGACTCGCTGTGTG...GTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR TCA 90 bp TCACTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCCCAGAGCTCCTTTTATaGCGTCAGCTCCCGGGGCGG +
Preference number: 4 (lower is better)
Translates to: SLGTFINHQAMSAAPRVCPELLL*RQLPGR
Trigger: CCGCCCCGGGAGCTGACGTCATAAAAGGAGCTCTGG...GCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR GCA 90 bp TTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCGTGTTTGCTGCCCCATaGACGGTGGTGGTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: LAHLLTIRLCLRPHVFAAVFAAP*TVVVVG
Trigger: TCCCACCACCACCACCGTGCATGGGGCAGCAAACAC...GGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR GCA 90 bp TCACTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCGCCCCACGTGTTTGCTaGCCCATGCACGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: SLGTFINHQAMSAAPRVCAPRVC*PMHGGG
Trigger: ACCACCACCGTGCATGGGGCAGCAAACACGTGGGGC...GCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp ATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGAAATGTCCTCCTCCTTaGTACACATTTGAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: IRLCLRPHVFAAPCTVVVKCPPP*YTFEGC
Trigger: ACAGCCCTCAAATGTGTACCAAGGAGGAGGACATTT...CACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319153.3
CDS-3UTR CCA 90 bp TTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACCCACAGGCTGAGGCATaGATGGGGAGCTTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: FINHQAMSAAPRVCCPMHPQAEA*MGSFLE
Trigger: TTCCAGGAAGCTCCCCATCCATGCCTCAGCCTGTGG...GTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp TCACTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCCCCCTGCTGGTGAGGTaGCCACAACGGTGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: SLGTFINHQAMSAAPRVCPLLVR*PQRCVG
Trigger: TCCCACACACCGTTGTGGCCACCTCACCAGCAGGGG...GCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp ACTCACTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTCAGCAGGGGCCTGGCTaGACTCCGCAAGCTCTAGGC +
Preference number: 4 (lower is better)
Translates to: THLAHLLTIRLCLRPHVFQQGPG*TPQALG
Trigger: GCCTAGAGCTTGCGGAGTCCAGCCAGGCCCCTGCTG...AAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAGTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR CCA 90 bp TTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCAGCCCCCGAAGGAGGTaGATGAGAAGGTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: LAHLLTIRLCLRPHVFAASPRRR*MRRWCG
Trigger: GCCACACCACCTTCTCATCCACCTCCTTCGGGGGCT...GGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR TCA 90 bp TTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGCATCCTGGAGAAATCTaGGGGATTTTCCAGAATCCC +
Preference number: 4 (lower is better)
Translates to: LTIRLCLRPHVFAAPCTVHPGEI*GIFQNP
Trigger: GGGATTCTGGAAAATCCCTCAGATTTCTCCAGGATG...CACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR TCA 90 bp TTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCTCACAGTCACCGACTTaGGCTGCCCGTCTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LAHLLTIRLCLRPHVFAASQSPT*AARLPP
Trigger: TGGAGGAAGACGGGCAGCTCAAGTCGGTGACTGTGA...GGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR GCA 90 bp CTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCGGGGCGGGAGAAAGATaGTTGCCCTGCACAGTTCTC +
Preference number: 4 (lower is better)
Translates to: LGTFINHQAMSAAPRVCCGAGER*LPCTVL
Trigger: GAGAACTGTGCAGGGCAAGCATCTTTCTCCCGCCCC...GCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR CCA 90 bp CTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCACAGGCTGAGGCATaGATGGGGAGCTTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: LGTFINHQAMSAAPRVCCPQAEA*MGSFLE
Trigger: TTCCAGGAAGCTCCCCATCCATGCCTCAGCCTGTGG...GCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp TCACTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCCTCACCAGGCAAACCTaGGCATATGGGCCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: SLGTFINHQAMSAAPRVCLTRQT*AYGPAP
Trigger: AGGGGCAGGCCCATATGCCCAGGTTTGCCTGGTGAG...GCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp TTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGTTGCAGGCTTGTTCCTaGGGCGGGAGAAAGATGCTT +
Preference number: 4 (lower is better)
Translates to: LLTIRLCLRPHVFAAPCTLQACS*GGRKML
Trigger: AAGCATCTTTCTCCCGCCCCAGGAACAAGCCTGCAA...CGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR TCA 90 bp CACTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTTCCAGCCTTGGTGAGTaGCAAAGGTCTGTGGCCGTG +
Preference number: 4 (lower is better)
Translates to: HLAHLLTIRLCLRPHVFASSLGE*QRSVAV
Trigger: CACGGCCACAGACCTTTGTCACTCACCAAGGCTGGA...AGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR TCA 90 bp TTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGATGAGAAGGCCTCCATaGAGGCCGGAAATTCTCCAA +
Preference number: 4 (lower is better)
Translates to: LLTIRLCLRPHVFAAPCTMRRPP*RPEILQ
Trigger: TTGGAGAATTTCCGGCCTTCATGGAGGCCTTCTCAT...CGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR TCA 90 bp TTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGATGGGGAAGAGGGAGTaGGCAGTTCTCCAACATATG +
Preference number: 4 (lower is better)
Translates to: LLTIRLCLRPHVFAAPCTMGKRE*AVLQHM
Trigger: CATATGTTGGAGAACTGCTCACTCCCTCTTCCCCAT...CGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR TCA 90 bp CACTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTCTGGAGAATCAGCTCTaGCCTGCACACCCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: HLAHLLTIRLCLRPHVFALENQL*PAHPSL
Trigger: GAGAGAGGGGTGTGCAGGTCAGAGCTGATTCTCCAG...AGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR GCA 90 bp CTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCGCACCTGCTGTCCCTTaGAGGCTTGTTCCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: LGTFINHQAMSAAPRVCCAPAVP*RLVPLP
Trigger: TGGAAGAGGAACAAGCCTGCAAGGGACAGCAGGTGC...GCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319153.3
CDS-3UTR GCA 90 bp TTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCACACAGTGGTGGACATaGTGGTGTGAGTGCCGATGG +
Preference number: 4 (lower is better)
Translates to: LAHLLTIRLCLRPHVFAATQWWT*WCECRW
Trigger: CCATCGGCACTCACACCAGCATGTCCACCACTGTGT...GGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR GCA 90 bp TCACTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCCACTTCACTCACTGGTaGCTACAGGCAGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: SLGTFINHQAMSAAPRVCHFTHW*LQAAAR
Trigger: CCTGGCAGCTGCCTGTAGGCACCAGTGAGTGAAGTG...GCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR CCA 90 bp TTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCGGATGGGGAGCTTCCTaGAATACCGTGAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: LAHLLTIRLCLRPHVFAAGWGAS*NTVSSS
Trigger: TGAGGAGCTCACGGTATTCCAGGAAGCTCCCCATCC...GGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp TTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGCCGTCGGTAAACTCTTaGATGAACCAGGCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: LLTIRLCLRPHVFAAPCTPSVNS*MNQAQR
Trigger: TCTCTGAGCCTGGTTCATCCAAGAGTTTACCGACGG...CGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp CATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCAGAAGGACACAGTGGTaGACATGCTGGTGTGAGTGC +
Preference number: 4 (lower is better)
Translates to: HLLTIRLCLRPHVFAAPCRRTQW*TCWCEC
Trigger: GCACTCACACCAGCATGTCCACCACTGTGTCCTTCT...GCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR CCA 90 bp TCACTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCGGCCTGAGATTCCCATaGGGAAGAGGGAGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: SLGTFINHQAMSAAPRVCGLRFP*GRGSEQ
Trigger: CTGCTCACTCCCTCTTCCCCATGGGAATCTCAGGCC...GCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR CCA 90 bp AACTCACTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTCCCCACTTCACTCACTaGTGCCTACAGGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: NSLGTFINHQAMSAAPRVPHFTH*CLQAAA
Trigger: GGCAGCTGCCTGTAGGCACCAGTGAGTGAAGTGGGG...AACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAGTGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR TCA 90 bp TCACTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCGGATTCCAGCCTTGGTaGGTGACAAAGGTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: SLGTFINHQAMSAAPRVCGFQPW*VTKVCG
Trigger: GCCACAGACCTTTGTCACTCACCAAGGCTGGAATCC...GCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR TCA 90 bp TTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCACCACGGTCACTATTaGATGGGCTGTCCCAGAACT +
Preference number: 4 (lower is better)
Translates to: LAHLLTIRLCLRPHVFAAHHGHY*MGCPRT
Trigger: AGTTCTGGGACAGCCCATTCAATAGTGACCGTGGTG...GGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR TCA 90 bp TCACTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCAGCCCAGCATGTTaGAGGATGAGAAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: SLGTFINHQAMSAAPRVCCSPAC*RMRRPP
Trigger: TGGAGGCCTTCTCATCCTTCAACATGCTGGGCTGCA...GCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR GCA 90 bp TCACTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCCTCGGGGCAATCTTCTaGGAAGACCCTGCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: SLGTFINHQAMSAAPRVCLGAIF*EDPASE
Trigger: CTCAGAAGCAGGGTCTTCGCAGAAGATTGCCCCGAG...GCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR GCA 90 bp ACTCACTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTCAGGCCAGAGTGGGCTaGCCTCCAGAGCTCCTTTTA +
Preference number: 4 (lower is better)
Translates to: THLAHLLTIRLCLRPHVFQARVG*PPELLL
Trigger: TAAAAGGAGCTCTGGAGGGCAGCCCACTCTGGCCTG...AAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAGTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR GCA 90 bp AACTCACTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTCCATCAGGCTATGTCTaGGGCCCCACGTGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: NSLGTFINHQAMSAAPRVPSGYV*GPTCLL
Trigger: CAGCAAACACGTGGGGCCGCAGACATAGCCTGATGG...AACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAGTGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR GCA 90 bp TTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCGGGAGAAAGATGCTTaGCCTGCACAGTTCTCCATG +
Preference number: 4 (lower is better)
Translates to: LAHLLTIRLCLRPHVFAAREKDA*PAQFSM
Trigger: CATGGAGAACTGTGCAGGGCAAGCATCTTTCTCCCG...GGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR TCA 90 bp CATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCCAATTCTACACCTGCTaGCACATGTGGCTTAGCAGA +
Preference number: 4 (lower is better)
Translates to: HLLTIRLCLRPHVFAAPCQFYTC*HMWLSR
Trigger: TCTGCTAAGCCACATGTGTCAGCAGGTGTAGAATTG...GCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR TCA 90 bp CTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCATGAGAAGGCCTCCATaGAGGCCGGAAATTCTCCAA +
Preference number: 4 (lower is better)
Translates to: LGTFINHQAMSAAPRVCCMRRPP*RPEILQ
Trigger: TTGGAGAATTTCCGGCCTTCATGGAGGCCTTCTCAT...GCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR TCA 90 bp TCACTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCTGTCCATCCATTTaGGCTGCTCCTTGCCGTTCA +
Preference number: 4 (lower is better)
Translates to: SLGTFINHQAMSAAPRVCCCPSI*AAPCRS
Trigger: TGAACGGCAAGGAGCAGCTCAAATGGATGGACAGCA...GCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR TCA 90 bp CACTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGGTATGATGAGGAGGTaGTGGGAATGGCTCCTAGTG +
Preference number: 4 (lower is better)
Translates to: HLAHLLTIRLCLRPHVFAGMMRR*WEWLLV
Trigger: CACTAGGAGCCATTCCCATCACCTCCTCATCATACC...AGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR GCA 90 bp CATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCCTTCCATGGTCTCCTTaGATCCTGGAGAAATCTGAG +
Preference number: 4 (lower is better)
Translates to: HLLTIRLCLRPHVFAAPCLPWSP*ILEKSE
Trigger: CTCAGATTTCTCCAGGATGCAAGGAGACCATGGAAG...GCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp CTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCAGTGAGCCATTGGTGTaGTTGGCAGTGGTGACAGTA +
Preference number: 4 (lower is better)
Translates to: LGTFINHQAMSAAPRVCCSEPLV*LAVVTV
Trigger: TACTGTCACCACTGCCAACCACACCAATGGCTCACT...GCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR CCA 90 bp TTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCACGGTGGGTGTCCATaGAGATGGATAAGGTGTCAT +
Preference number: 4 (lower is better)
Translates to: LAHLLTIRLCLRPHVFAAHGGCP*RWIRCH
Trigger: ATGACACCTTATCCATCTCCATGGACACCCACCGTG...GGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR TCA 90 bp ACTCACTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTTGCTGTCCATCCATTTaGGCTGCTCCTTGCCGTTCA +
Preference number: 4 (lower is better)
Translates to: THLAHLLTIRLCLRPHVFCCPSI*AAPCRS
Trigger: TGAACGGCAAGGAGCAGCTCAAATGGATGGACAGCA...AAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAGTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR GCA 90 bp TCACTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTTAGCAGTTAGCACCTaGTGTCCCTTGCAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: SLGTFINHQAMSAAPRVCLAVST*CPLQAC
Trigger: ACAAGCCTGCAAGGGACAGCAGGTGCTAACTGCTAA...GCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR GCA 90 bp CACTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTTCCATCCATTTGAGCTaGTCCTTGCCGTTCACAGTC +
Preference number: 4 (lower is better)
Translates to: HLAHLLTIRLCLRPHVFASIHLS*SLPFTV
Trigger: GACTGTGAACGGCAAGGAGCAGCTCAAATGGATGGA...AGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp CATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCCCAATACAAGGGATTTaGAGAGTGGAAAAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: HLLTIRLCLRPHVFAAPCPIQGI*RVEKRG
Trigger: GCCTCTCTTTTCCACTCTCCAAATCCCTTGTATTGG...GCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp CATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCGGTCTCCTTGCATCCTaGAGAAATCTGAGGGATTTT +
Preference number: 4 (lower is better)
Translates to: HLLTIRLCLRPHVFAAPCGLLAS*RNLRDF
Trigger: AAAATCCCTCAGATTTCTCCAGGATGCAAGGAGACC...GCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CCA 90 bp CATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCCAAGGCCAGTATCCATaGGGCAAAGAATGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: HLLTIRLCLRPHVFAAPCQGQYP*GKECFL
Trigger: AAGGAAACATTCTTTGCCCCATGGATACTGGCCTTG...GCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR GCA 90 bp CACTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTCCTTCAGGAAGGTTCTaGAAATCTCAGGGCAATAGG +
Preference number: 4 (lower is better)
Translates to: HLAHLLTIRLCLRPHVFAPSGRF*KSQGNR
Trigger: CCTATTGCCCTGAGATTTGCAGAACCTTCCTGAAGG...AGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR CCA 90 bp TTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCAATACAAGGGATTTaGAGAGTGGAAAAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: LAHLLTIRLCLRPHVFAAPIQGI*RVEKRG
Trigger: GCCTCTCTTTTCCACTCTCCAAATCCCTTGTATTGG...GGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR TCA 90 bp ACTCACTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTCATCCTGGAGAAATCTaGGGGATTTTCCAGAATCCC +
Preference number: 4 (lower is better)
Translates to: THLAHLLTIRLCLRPHVFHPGEI*GIFQNP
Trigger: GGGATTCTGGAAAATCCCTCAGATTTCTCCAGGATG...AAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAGTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR CCA 90 bp CACTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTACGGTCACTATTGAATaGGCTGTCCCAGAACTCAAA +
Preference number: 4 (lower is better)
Translates to: HLAHLLTIRLCLRPHVFATVTIE*AVPELK
Trigger: TTTGAGTTCTGGGACAGCCCATTCAATAGTGACCGT...AGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR GCA 90 bp ACTCACTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTCAGTTCTCCAACATATaGCAGATGCTCAAGATGGGA +
Preference number: 4 (lower is better)
Translates to: THLAHLLTIRLCLRPHVFQFSNI*QMLKMG
Trigger: TCCCATCTTGAGCATCTGGCATATGTTGGAGAACTG...AAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAGTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR CCA 90 bp ACTCACTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGGTCTCCTTGCATCCTaGAGAAATCTGAGGGATTTT +
Preference number: 4 (lower is better)
Translates to: THLAHLLTIRLCLRPHVFGLLAS*RNLRDF
Trigger: AAAATCCCTCAGATTTCTCCAGGATGCAAGGAGACC...AAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAGTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR CCA 90 bp CACTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGGGTGTCCATGGAGATaGATAAGGTGTCATTATATA +
Preference number: 4 (lower is better)
Translates to: HLAHLLTIRLCLRPHVFAGCPWR*IRCHYI
Trigger: TATATAATGACACCTTATCCATCTCCATGGACACCC...AGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS CCA 90 bp GTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTaGGAAGGCAGGGCCGGGTGGCCAGCGCCTACTTGCTGTCCATCC +
Preference number: 5 (lower is better)
Translates to: VCGPTCLLPHARWWW*EGRAGWPAPTCCPS
Trigger: GGATGGACAGCAAGTAGGCGCTGGCCACCCGGCCCTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS CCA 90 bp TACGGAAGGTGTAGCCGGTGTCGAAGGGGCTGTGGTAGGGCGTGCTaGCCCCGCCACCAGCCCGCCAGCTGTCACAGCCAGCACGGTCAT +
Preference number: 5 (lower is better)
Translates to: YGRCSRCRRGCGRAC*PRHQPASCHSQHGH
Trigger: ATGACCGTGCTGGCTGTGACAGCTGGCGGGCTGGTGGCGGGGCCAGCACGCCCTACCACAGCCCCTTCGACACCGGCTACACCTTCCGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS CCA 90 bp GGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTaGTGGTGGGAAGGCAGGGCCGGGTGGCCAGCGCCTACTTGCTGT +
Preference number: 5 (lower is better)
Translates to: GYVCGPTCLLPHARW*WWEGRAGWPAPTCC
Trigger: ACAGCAAGTAGGCGCTGGCCACCCGGCCCTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS CCA 90 bp TCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTaGTGGTGGTGGGAAGGCAGGGCCGGGTGGCCAGCGCCTACTTGC +
Preference number: 5 (lower is better)
Translates to: SGYVCGPTCLLPHAR*WWWEGRAGWPAPTC
Trigger: GCAAGTAGGCGCTGGCCACCCGGCCCTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS GCA 90 bp TTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATaGACGGTGGTGGTGGTGGGAAGGCAGGGCCGGGTGGCCAGCGCC +
Preference number: 5 (lower is better)
Translates to: LTIRLCLRPHVFAAP*TVVVVGRQGRVASA
Trigger: GGCGCTGGCCACCCGGCCCTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS CCA 90 bp TATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTaGTGGGAAGGCAGGGCCGGGTGGCCAGCGCCTACTTGCTGTCCA +
Preference number: 5 (lower is better)
Translates to: YVCGPTCLLPHARWW*WEGRAGWPAPTCCP
Trigger: TGGACAGCAAGTAGGCGCTGGCCACCCGGCCCTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS TCA 90 bp AAAGGGCAGAGGCAGGATCAGCCACGGGATTCCAGCCTTGGTGAGTaGCAAAGGTCTGTGGCCGTGGTGGGGGAGGCGGGCAAGGGCGTC +
Preference number: 5 (lower is better)
Translates to: KGQRQDQPRDSSLGE*QRSVAVVGEAGKGV
Trigger: GACGCCCTTGCCCGCCTCCCCCACCACGGCCACAGACCTTTGTCACTCACCAAGGCTGGAATCCCGTGGCTGATCCTGCCTCTGCCCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS TCA 90 bp AGCCAAAGGGCAGAGGCAGGATCAGCCACGGGATTCCAGCCTTGGTaGGTGACAAAGGTCTGTGGCCGTGGTGGGGGAGGCGGGCAAGGG +
Preference number: 5 (lower is better)
Translates to: SQRAEAGSATGFQPW*VTKVCGRGGGGGQG
Trigger: CCCTTGCCCGCCTCCCCCACCACGGCCACAGACCTTTGTCACTCACCAAGGCTGGAATCCCGTGGCTGATCCTGCCTCTGCCCTTTGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CAA 90 bp CTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCAGGAGCATCTCGATTCCTaGTTCCCTGACCGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: LRPHVFAAPCTVVVVGRQEHLDS*FPDRWS
Trigger: GGACCAGCGGTCAGGGAACAAGGAATCGAGATGCTC...CTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CAA 90 bp CGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCAGGGCGGAAAAGAGAGGCCGTaGCAGGCAGGTGACAATGGT +
Preference number: 5 (lower is better)
Translates to: RPHVFAAPCTVVVVGRQGGKERP*QAGDNG
Trigger: ACCATTGTCACCTGCCTGCAACGGCCTCTCTTTTCC...GCCCTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CAA 90 bp AACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTTGCGGCCCCACGTGTTaGCTGCCCCATGCACGGTGG +
Preference number: 5 (lower is better)
Translates to: NHQAMSAAPRVCCPMHGGCGPTC*LPHARW
Trigger: CCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCA...ACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS CCA 90 bp AGGATCAGCCACGGGATTCCAGCCTTGGTGAGTGACAAAGGTCTGTaGCCGTGGTGGGGGAGGCGGGCAAGGGCGTCCTGGGTATGTCCA +
Preference number: 5 (lower is better)
Translates to: RISHGIPALVSDKGL*PWWGRRARASWVCP
Trigger: TGGACATACCCAGGACGCCCTTGCCCGCCTCCCCCACCACGGCCACAGACCTTTGTCACTCACCAAGGCTGGAATCCCGTGGCTGATCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS CCA 90 bp CCACAACGGTGTGTGGGAATGGGATGCTCTGTGACCCAGGTGGTGTaGGCTGAGTCCCGGGAGCCAAAGGGCAGAGGCAGGATCAGCCAC +
Preference number: 5 (lower is better)
Translates to: PQRCVGMGCSVTQVV*AESREPKGRGRISH
Trigger: GTGGCTGATCCTGCCTCTGCCCTTTGGCTCCCGGGACTCAGCCCACACCACCTGGGTCACAGAGCATCCCATTCCCACACACCGTTGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS CCA 90 bp CCTACAGGCAGCTGCCAGGGCCCCACCTCCCATAGCTTCTCACTGTaGGTCCCAGGCTGGAGAATCAGCTCTGACCTGCACACCCCTCTC +
Preference number: 5 (lower is better)
Translates to: PTGSCQGPTSHSFSL*VPGWRISSDLHTPL
Trigger: GAGAGGGGTGTGCAGGTCAGAGCTGATTCTCCAGCCTGGGACCCACAGTGAGAAGCTATGGGAGGTGGGGCCCTGGCAGCTGCCTGTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR CAA 90 bp CTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCAGGTGACCTTGTGGCCATaGATCATCTCGGTGGACGAC +
Preference number: 5 (lower is better)
Translates to: LRPHVFAAPCTVVVVGRQVTLWP*IISVDD
Trigger: GTCGTCCACCGAGATGATCAATGGCCACAAGGTCAC...CTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CAA 90 bp CGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCAGGGCGAGCCATTGGTGTGGTaGGCAGTGGTGACAGTAATG +
Preference number: 5 (lower is better)
Translates to: RPHVFAAPCTVVVVGRQGEPLVW*AVVTVM
Trigger: CATTACTGTCACCACTGCCAACCACACCAATGGCTC...GCCCTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR CAA 90 bp CTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCAGGCGGGAGAAAGATGCTaGCCCTGCACAGTTCTCCAT +
Preference number: 5 (lower is better)
Translates to: LRPHVFAAPCTVVVVGRQAGERC*PCTVLH
Trigger: ATGGAGAACTGTGCAGGGCAAGCATCTTTCTCCCGC...CTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR CAA 90 bp ACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGAGCACCTGCTGTCCCTaGCAGGCTTGTTCCTGGGGC +
Preference number: 5 (lower is better)
Translates to: TIRLCLRPHVFAAPCTVVSTCCP*QACSWG
Trigger: GCCCCAGGAACAAGCCTGCAAGGGACAGCAGGTGCT...CACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS GCA 90 bp CAGGGCCGGGTGGCCAGCGCCTACTTGCTGTCCATCCATTTGAGCTaGTCCTTGCCGTTCACAGTCACCGACTTGAGCTGCCCGTCTTCC +
Preference number: 5 (lower is better)
Translates to: QGRVASAYLLSIHLS*SLPFTVTDLSCPSS
Trigger: GGAAGACGGGCAGCTCAAGTCGGTGACTGTGAACGGCAAGGAGCAGCTCAAATGGATGGACAGCAAGTAGGCGCTGGCCACCCGGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS CCA 90 bp TCACCAGGCAAACCTGGGCATATGGGCCTGCCCCTGCTGGTGAGGTaGCCACAACGGTGTGTGGGAATGGGATGCTCTGTGACCCAGGTG +
Preference number: 5 (lower is better)
Translates to: SPGKPGHMGLPLLVR*PQRCVGMGCSVTQV
Trigger: CACCTGGGTCACAGAGCATCCCATTCCCACACACCGTTGTGGCCACCTCACCAGCAGGGGCAGGCCCATATGCCCAGGTTTGCCTGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CAA 90 bp CTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGATTCACAGTCACCGACTaGAGCTGCCCGTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: LCLRPHVFAAPCTVVVVGFTVTD*SCPSSS
Trigger: GGAGGAAGACGGGCAGCTCAAGTCGGTGACTGTGAA...TCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CAA 90 bp CTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCAGTTGCTGTCCATCCATTaGAGCTGCTCCTTGCCGTTC +
Preference number: 5 (lower is better)
Translates to: LRPHVFAAPCTVVVVGRQLLSIH*SCSLPF
Trigger: GAACGGCAAGGAGCAGCTCAAATGGATGGACAGCAA...CTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS TCA 90 bp CCAGGCTCAGAGACACACAGTGCTCAAGGTCACACAGCGAGTCAGTaGGGGAGGGGATGTGAAACCAGGGCCAAGGCTGCAGCGGACAGC +
Preference number: 5 (lower is better)
Translates to: PGSETHSAQGHTASQ*GRGCETRAKAAADS
Trigger: GCTGTCCGCTGCAGCCTTGGCCCTGGTTTCACATCCCCTCCCTCACTGACTCGCTGTGTGACCTTGAGCACTGTGTGTCTCTGAGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS GCA 90 bp CTGCTGTCCCTTGCAGGCTTGTTCCTGGGGCGGGAGAAAGATGCTTaGCCTGCACAGTTCTCCATGATGGCGGTGGCAGTGGGAGAGGCA +
Preference number: 5 (lower is better)
Translates to: LLSLAGLFLGREKDA*PAQFSMMAVAVGEA
Trigger: TGCCTCTCCCACTGCCACCGCCATCATGGAGAACTGTGCAGGGCAAGCATCTTTCTCCCGCCCCAGGAACAAGCCTGCAAGGGACAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS GCA 90 bp GCACCTGCTGTCCCTTGCAGGCTTGTTCCTGGGGCGGGAGAAAGATaGTTGCCCTGCACAGTTCTCCATGATGGCGGTGGCAGTGGGAGA +
Preference number: 5 (lower is better)
Translates to: APAVPCRLVPGAGER*LPCTVLHDGGGSGR
Trigger: TCTCCCACTGCCACCGCCATCATGGAGAACTGTGCAGGGCAAGCATCTTTCTCCCGCCCCAGGAACAAGCCTGCAAGGGACAGCAGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS CCA 90 bp GAGCTCCTCAGCAGCTCCCAGGCAAGCTCTAGAGAGCCGCTCACCTaGGAGCTGCAGGTGAGCATCTCGATTCCTTGTTCCCTGACCGCT +
Preference number: 5 (lower is better)
Translates to: ELLSSSQASSREPLT*ELQVSISIPCSLTA
Trigger: AGCGGTCAGGGAACAAGGAATCGAGATGCTCACCTGCAGCTCCCAGGTGAGCGGCTCTCTAGAGCTTGCCTGGGAGCTGCTGAGGAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CAA 90 bp CTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCAGTACAGGGAGCGTTTCTaGGAGTCAGACAGAACCTCA +
Preference number: 5 (lower is better)
Translates to: LRPHVFAAPCTVVVVGRQYRERF*ESDRTS
Trigger: TGAGGTTCTGTCTGACTCCAAGAAACGCTCCCTGTA...CTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CAA 90 bp ATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGCCACCACGGTCACTATaGAATGGGCTGTCCCAGAAC +
Preference number: 5 (lower is better)
Translates to: MSAAPRVCCPMHGGGGGKPPRSL*NGLSQN
Trigger: GTTCTGGGACAGCCCATTCAATAGTGACCGTGGTGG...CTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CAA 90 bp TGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGTTGCTGTCCATCCATTaGAGCTGCTCCTTGCCGTTC +
Preference number: 5 (lower is better)
Translates to: CLRPHVFAAPCTVVVVGRLLSIH*SCSLPF
Trigger: GAACGGCAAGGAGCAGCTCAAATGGATGGACAGCAA...CCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CAA 90 bp ATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGCCAGCGCCTACTaGCTGTCCATCCATTTGAGC +
Preference number: 5 (lower is better)
Translates to: IRLCLRPHVFAAPCTVVVVASAY*LSIHLS
Trigger: GCTCAAATGGATGGACAGCAAGTAGGCGCTGGCCAC...CACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CAA 90 bp TTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGCTGCTGGGAGCAGTGTaGGTGCTGCTGGTGCCGGGG +
Preference number: 5 (lower is better)
Translates to: LLTIRLCLRPHVFAAPCTLLGAV*VLLVPG
Trigger: CCCCGGCACCAGCAGCACCAACACTGCTCCCAGCAG...CGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS CCA 90 bp ACCCTGCTTCTGAGCCACAGGCTGAGGCATGGATGGGGAGCTTCCTaGAATACCGTGAGCTCCTCAGCAGCTCCCAGGCAAGCTCTAGAG +
Preference number: 5 (lower is better)
Translates to: TLLLSHRLRHGWGAS*NTVSSSAAPRQALE
Trigger: CTCTAGAGCTTGCCTGGGAGCTGCTGAGGAGCTCACGGTATTCCAGGAAGCTCCCCATCCATGCCTCAGCCTGTGGCTCAGAAGCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS CCA 90 bp TCTTCTGCGAAGACCCTGCTTCTGAGCCACAGGCTGAGGCATGGATaGGGAGCTTCCTGGAATACCGTGAGCTCCTCAGCAGCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: SSAKTLLLSHRLRHG*GASWNTVSSSAAPR
Trigger: CCTGGGAGCTGCTGAGGAGCTCACGGTATTCCAGGAAGCTCCCCATCCATGCCTCAGCCTGTGGCTCAGAAGCAGGGTCTTCGCAGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS CCA 90 bp ACGCGCTCCTGCCCGTTCTCCACGATGCGCTTGGTGGTGACCTTGTaGCCATTGATCATCTCGGTGGACGACATCACCGACTTGAACCCC +
Preference number: 5 (lower is better)
Translates to: TRSCPFSTMRLVVTL*PLIISVDDITDLNP
Trigger: GGGGTTCAAGTCGGTGATGTCGTCCACCGAGATGATCAATGGCCACAAGGTCACCACCAAGCGCATCGTGGAGAACGGGCAGGAGCGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CAA 90 bp ATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGGAAAAGAGAGGCCGTaGCAGGCAGGTGACAATGGT +
Preference number: 5 (lower is better)
Translates to: IRLCLRPHVFAAPCTVVVGKERP*QAGDNG
Trigger: ACCATTGTCACCTGCCTGCAACGGCCTCTCTTTTCC...CACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CAA 90 bp ATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGCACGGGATTCCAGCCTaGGTGAGTGACAAAGGTCTG +
Preference number: 5 (lower is better)
Translates to: IRLCLRPHVFAAPCTVVVHGIPA*VSDKGL
Trigger: CAGACCTTTGTCACTCACCAAGGCTGGAATCCCGTG...CACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CAA 90 bp AACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTTCCGCCTCCTCCTTATaGTCAGGGTTCTTGTCGGGG +
Preference number: 5 (lower is better)
Translates to: NHQAMSAAPRVCCPMHGGSASSL*SGFLSG
Trigger: CCCCGACAAGAACCCTGACAATAAGGAGGAGGCGGA...ACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CAA 90 bp TGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGTACAGGGAGCGTTTCTaGGAGTCAGACAGAACCTCA +
Preference number: 5 (lower is better)
Translates to: CLRPHVFAAPCTVVVVGRYRERF*ESDRTS
Trigger: TGAGGTTCTGTCTGACTCCAAGAAACGCTCCCTGTA...CCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CAA 90 bp CGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGGCAGGGCCAGCAAGGCTTGTGCTaGAGAGTAATTGATGATGGT +
Preference number: 5 (lower is better)
Translates to: RPHVFAAPCTVVVVGRQGQQGLC*RVIDDG
Trigger: ACCATCATCAATTACTCTCAAGCACAAGCCTTGCTG...GCCCTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR CAA 90 bp TTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGTTCACAGTCACCGACTaGAGCTGCCCGTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: LTIRLCLRPHVFAAPCTVFTVTD*SCPSSS
Trigger: GGAGGAAGACGGGCAGCTCAAGTCGGTGACTGTGAA...CACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS TCA 90 bp GTCCCAGGCTGGAGAATCAGCTCTGACCTGCACACCCCTCTCTCATaGCAGTGCCACTCAGAGACAGCAGGAACTTGGGCTGCCTCTGAA +
Preference number: 5 (lower is better)
Translates to: VPGWRISSDLHTPLS*QCHSETAGTWAASE
Trigger: TTCAGAGGCAGCCCAAGTTCCTGCTGTCTCTGAGTGGCACTGTCATGAGAGAGGGGTGTGCAGGTCAGAGCTGATTCTCCAGCCTGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR CAA 90 bp ACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGGCTTAGCAGAGGAGTaGAAGAGCAGAACTTCTCCA +
Preference number: 5 (lower is better)
Translates to: TIRLCLRPHVFAAPCTVVGLAEE*KSRTSP
Trigger: TGGAGAAGTTCTGCTCTTCAACTCCTCTGCTAAGCC...CACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CAA 90 bp TTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGCCGTCGGTAAACTCTaGGATGAACCAGGCTCAGAG +
Preference number: 5 (lower is better)
Translates to: LTIRLCLRPHVFAAPCTVAVGKL*DEPGSE
Trigger: CTCTGAGCCTGGTTCATCCAAGAGTTTACCGACGGC...CACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CAA 90 bp TTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGCACGGGATTCCAGCCTaGGTGAGTGACAAAGGTCTG +
Preference number: 5 (lower is better)
Translates to: LTIRLCLRPHVFAAPCTVHGIPA*VSDKGL
Trigger: CAGACCTTTGTCACTCACCAAGGCTGGAATCCCGTG...CACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CAA 90 bp TCACTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCGGCCCCACGTGTTaGCTGCCCCATGCACGGTGG +
Preference number: 5 (lower is better)
Translates to: SLGTFINHQAMSAAPRVCCGPTC*LPHARW
Trigger: CCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCA...GCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CAA 90 bp ATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTGGGAAGAGCAGAGGTTGTATCTaGTTCGGCTATACCACAGTG +
Preference number: 5 (lower is better)
Translates to: MSAAPRVCCPMHGGGGGKSRGCI*FGYTTV
Trigger: CACTGTGGTATAGCCGAACAAGATACAACCTCTGCT...CTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS CCA 90 bp CTGGGAGCTGCAGGTGAGCATCTCGATTCCTTGTTCCCTGACCGCTaGTCCCAGACTGTTCAGGGTGCAGCGTGTAGTAAATGTCCTCCT +
Preference number: 5 (lower is better)
Translates to: LGAAGEHLDSLFPDR*SQTVQGAACSKCPP
Trigger: AGGAGGACATTTACTACACGCTGCACCCTGAACAGTCTGGGACCAGCGGTCAGGGAACAAGGAATCGAGATGCTCACCTGCAGCTCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319153.3
CDS CCA 90 bp CTGTCTAGGACAGTGGCTGGCACACGAGGGCCGTCGGTAAACTCTTaGATGAACCAGGCTCAGAGACACACAGTGCTCAAGGTCACACAG +
Preference number: 5 (lower is better)
Translates to: LSRTVAGTRGPSVNS*MNQAQRHTVLKVTQ
Trigger: CTGTGTGACCTTGAGCACTGTGTGTCTCTGAGCCTGGTTCATCCAAGAGTTTACCGACGGCCCTCGTGTGCCAGCCACTGTCCTAGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CAA 90 bp ACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTGGCCAATACAAGGGATTaGGAGAGTGGAAAAGAGAGG +
Preference number: 5 (lower is better)
Translates to: TIRLCLRPHVFAAPCTVVANTRD*ESGKER
Trigger: CCTCTCTTTTCCACTCTCCAAATCCCTTGTATTGGC...CACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CAA 90 bp TTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGCCTCAGACACCAGCTaGAACTTCTTCTCCGCCTCC +
Preference number: 5 (lower is better)
Translates to: LLTIRLCLRPHVFAAPCTASDTS*NFFSAS
Trigger: GGAGGCGGAGAAGAAGTTCAAGCTGGTGTCTGAGGC...CGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CAA 90 bp TTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGCTCCTAGTGAGCCATaGGTGTGGTTGGCAGTGGTG +
Preference number: 5 (lower is better)
Translates to: LLTIRLCLRPHVFAAPCTAPSEP*VWLAVV
Trigger: CACCACTGCCAACCACACCAATGGCTCACTAGGAGC...CGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR CAA 90 bp TTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGAGCCTTTGTTGTGGTaGGCAGTGATGGTGCAGGTA +
Preference number: 5 (lower is better)
Translates to: LTIRLCLRPHVFAAPCTVEPLLW*AVMVQV
Trigger: TACCTGCACCATCACTGCCAACCACAACAAAGGCTC...CACCGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR CAA 90 bp TTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACCTGTCCCTTGCAGGCTaGTTCCTGGGGCGGGAGAAA +
Preference number: 5 (lower is better)
Translates to: FINHQAMSAAPRVCCPMHLSLAG*FLGREK
Trigger: TTTCTCCCGCCCCAGGAACAAGCCTGCAAGGGACAG...GTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS CCA 90 bp CACTCAGAGACAGCAGGAACTTGGGCTGCCTCTGAAAGCTTCTGTTaGGCCATGATGTGTGGCAGTCTTGCTGCATCCCATGGTCAAGGC +
Preference number: 5 (lower is better)
Translates to: HSETAGTWAASESFC*AMMCGSLAASHGQG
Trigger: GCCTTGACCATGGGATGCAGCAAGACTGCCACACATCATGGCCCAACAGAAGCTTTCAGAGGCAGCCCAAGTTCCTGCTGTCTCTGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR CAA 90 bp CATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCGAGCATCTCGATTCCTaGTTCCCTGACCGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: HLLTIRLCLRPHVFAAPCEHLDS*FPDRWS
Trigger: GGACCAGCGGTCAGGGAACAAGGAATCGAGATGCTC...GCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CAA 90 bp CATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCGCCTCAGACACCAGCTaGAACTTCTTCTCCGCCTCC +
Preference number: 5 (lower is better)
Translates to: HLLTIRLCLRPHVFAAPCASDTS*NFFSAS
Trigger: GGAGGCGGAGAAGAAGTTCAAGCTGGTGTCTGAGGC...GCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CAA 90 bp TTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGACGACATCACCGACTaGAACCCCGAGCTGCCAGAA +
Preference number: 5 (lower is better)
Translates to: FINHQAMSAAPRVCCPMHDDITD*NPELPE
Trigger: TTCTGGCAGCTCGGGGTTCAAGTCGGTGATGTCGTC...GTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CAA 90 bp CATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCTTCTCCACGATGCGCTaGGTGGTGACCTTGTGGCCA +
Preference number: 5 (lower is better)
Translates to: HLLTIRLCLRPHVFAAPCFSTMR*VVTLWP
Trigger: TGGCCACAAGGTCACCACCAAGCGCATCGTGGAGAA...GCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CAA 90 bp CATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCGTGGCCAGCGCCTACTaGCTGTCCATCCATTTGAGC +
Preference number: 5 (lower is better)
Translates to: HLLTIRLCLRPHVFAAPCVASAY*LSIHLS
Trigger: GCTCAAATGGATGGACAGCAAGTAGGCGCTGGCCAC...GCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS TCA 90 bp AGACAGCAGGAACTTGGGCTGCCTCTGAAAGCTTCTGTTGGGCCATaGTGTGTGGCAGTCTTGCTGCATCCCATGGTCAAGGCCAGTATC +
Preference number: 5 (lower is better)
Translates to: RQQELGLPLKASVGP*CVAVLLHPMVKASI
Trigger: GATACTGGCCTTGACCATGGGATGCAGCAAGACTGCCACACATCATGGCCCAACAGAAGCTTTCAGAGGCAGCCCAAGTTCCTGCTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS TCA 90 bp CTCATGACAGTGCCACTCAGAGACAGCAGGAACTTGGGCTGCCTCTaGAAGCTTCTGTTGGGCCATGATGTGTGGCAGTCTTGCTGCATC +
Preference number: 5 (lower is better)
Translates to: LMTVPLRDSRNLGCL*KLLLGHDVWQSCCI
Trigger: GATGCAGCAAGACTGCCACACATCATGGCCCAACAGAAGCTTTCAGAGGCAGCCCAAGTTCCTGCTGTCTCTGAGTGGCACTGTCATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS TCA 90 bp GCCTTTGTTGTGGTTGGCAGTGATGGTGCAGGTATGATGAGGAGGTaGTGGGAATGGCTCCTAGTGAGCCATTGGTGTGGTTGGCAGTGG +
Preference number: 5 (lower is better)
Translates to: AFVVVGSDGAGMMRR*WEWLLVSHWCGWQW
Trigger: CCACTGCCAACCACACCAATGGCTCACTAGGAGCCATTCCCATCACCTCCTCATCATACCTGCACCATCACTGCCAACCACAACAAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS GCA 90 bp CTGAGATTCCCATGGGGAAGAGGGAGTGAGCAGTTCTCCAACATATaGCAGATGCTCAAGATGGGACTGACAGCGGGGCTGGTAACGATG +
Preference number: 5 (lower is better)
Translates to: LRFPWGRGSEQFSNI*QMLKMGLTAGLVTM
Trigger: CATCGTTACCAGCCCCGCTGTCAGTCCCATCTTGAGCATCTGGCATATGTTGGAGAACTGCTCACTCCCTCTTCCCCATGGGAATCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR CAA 90 bp CATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCCTGTCCCTTGCAGGCTaGTTCCTCTTCCATGGTCTC +
Preference number: 5 (lower is better)
Translates to: HLLTIRLCLRPHVFAAPCLSLAG*FLFHGL
Trigger: GAGACCATGGAAGAGGAACAAGCCTGCAAGGGACAG...GCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319153.3
CDS-3UTR CAA 90 bp TTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCAGCACCTGCTGTCCCTaGCAGGCTTGTTCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: LAHLLTIRLCLRPHVFAASTCCP*QACSSS
Trigger: GGAAGAGGAACAAGCCTGCAAGGGACAGCAGGTGCT...GGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319153.3
CDS-3UTR CAA 90 bp CATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCGCCGTCGGTAAACTCTaGGATGAACCAGGCTCAGAG +
Preference number: 5 (lower is better)
Translates to: HLLTIRLCLRPHVFAAPCAVGKL*DEPGSE
Trigger: CTCTGAGCCTGGTTCATCCAAGAGTTTACCGACGGC...GCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CAA 90 bp CATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCCGCTTGGTGGTGACCTaGTGGCCATTGATCATCTCG +
Preference number: 5 (lower is better)
Translates to: HLLTIRLCLRPHVFAAPCRLVVT*WPLIIS
Trigger: CGAGATGATCAATGGCCACAAGGTCACCACCAAGCG...GCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CAA 90 bp CACTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTCTGCTGTTGACTGTGTaGCTGGTGGGGAGAGGCACG +
Preference number: 5 (lower is better)
Translates to: HLAHLLTIRLCLRPHVFALLLTV*LVGRGT
Trigger: CGTGCCTCTCCCCACCAGCAACACAGTCAACAGCAG...AGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS GCA 90 bp AGCCTGCCAATACAAGGGATTTGGAGAGTGGAAAAGAGAGGCCGTTaGAGGCAGGTGACAATGGTGAGCTTTGCAACAGCTCGGGGCAAT +
Preference number: 5 (lower is better)
Translates to: SLPIQGIWRVEKRGR*RQVTMVSFATARGN
Trigger: ATTGCCCCGAGCTGTTGCAAAGCTCACCATTGTCACCTGCCTGCAACGGCCTCTCTTTTCCACTCTCCAAATCCCTTGTATTGGCAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CAA 90 bp TTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCACGGGCTTAGCAGAGGAGTaGAAGAGCAGAACTTCTCCA +
Preference number: 5 (lower is better)
Translates to: LLTIRLCLRPHVFAAPCTGLAEE*KSRTSP
Trigger: TGGAGAAGTTCTGCTCTTCAACTCCTCTGCTAAGCC...CGTGCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CAA 90 bp TCACTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTCCGCCTCCTCCTTATaGTCAGGGTTCTTGTCGGGG +
Preference number: 5 (lower is better)
Translates to: SLGTFINHQAMSAAPRVCSASSL*SGFLSG
Trigger: CCCCGACAAGAACCCTGACAATAAGGAGGAGGCGGA...GCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CAA 90 bp TCACTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCGACGACATCACCGACTaGAACCCCGAGCTGCCAGAA +
Preference number: 5 (lower is better)
Translates to: SLGTFINHQAMSAAPRVCDDITD*NPELPE
Trigger: TTCTGGCAGCTCGGGGTTCAAGTCGGTGATGTCGTC...GCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CAA 90 bp CTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCGTGACCTTGTGGCCATaGATCATCTCGGTGGACGAC +
Preference number: 5 (lower is better)
Translates to: LGTFINHQAMSAAPRVCCVTLWP*IISVDD
Trigger: GTCGTCCACCGAGATGATCAATGGCCACAAGGTCAC...GCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CAA 90 bp CACTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTTTCTCCACGATGCGCTaGGTGGTGACCTTGTGGCCA +
Preference number: 5 (lower is better)
Translates to: HLAHLLTIRLCLRPHVFAFSTMR*VVTLWP
Trigger: TGGCCACAAGGTCACCACCAAGCGCATCGTGGAGAA...AGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS GCA 90 bp TGTGGCTGGATTTTTGTCACTATGTCTCGGTTAGCAGTTAGCACCTaGTGTCCCTTGCAGGCTTGTTCCTGGGGCGGGAGAAAGATGCTT +
Preference number: 5 (lower is better)
Translates to: CGWIFVTMSRLAVST*CPLQACSWGGRKML
Trigger: AAGCATCTTTCTCCCGCCCCAGGAACAAGCCTGCAAGGGACAGCAGGTGCTAACTGCTAACCGAGACATAGTGACAAAAATCCAGCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS CCA 90 bp CATGCTGGTGTGAGTGCCGATGGCGATGGTGATGGCACTGAGGTGTaGGGCTCTGTATTTTCTGTTGCTAACTTGGCATTACACCAACCT +
Preference number: 5 (lower is better)
Translates to: HAGVSADGDGDGTEV*GSVFSVANLALHQP
Trigger: AGGTTGGTGTAATGCCAAGTTAGCAACAGAAAATACAGAGCCCCACACCTCAGTGCCATCACCATCGCCATCGGCACTCACACCAGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS CCA 90 bp GCTGTTGACTGTGTTGCTGGTGGGGAGAGGCACGGTGGGTGTCCATaGAGATGGATAAGGTGTCATTATATAGTAGAGGTGACCATGGGA +
Preference number: 5 (lower is better)
Translates to: AVDCVAGGERHGGCP*RWIRCHYIVEVTMG
Trigger: TCCCATGGTCACCTCTACTATATAATGACACCTTATCCATCTCCATGGACACCCACCGTGCCTCTCCCCACCAGCAACACAGTCAACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR CAA 90 bp CATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCCCATGCCTCCTTGGTACACATTaGAGGGCTGTGTACTGTGAG +
Preference number: 5 (lower is better)
Translates to: HLLTIRLCLRPHVFAAPCLLGTH*RAVYCE
Trigger: CTCACAGTACACAGCCCTCAAATGTGTACCAAGGAG...GCATGGGGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319153.3
CDS-3UTR CAA 90 bp CACTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTCCACCACGGTCACTATaGAATGGGCTGTCCCAGAAC +
Preference number: 5 (lower is better)
Translates to: HLAHLLTIRLCLRPHVFAPPRSL*NGLSQN
Trigger: GTTCTGGGACAGCCCATTCAATAGTGACCGTGGTGG...AGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS-3UTR CAA 90 bp TCACTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCCGCTTGGTGGTGACCTaGTGGCCATTGATCATCTCG +
Preference number: 5 (lower is better)
Translates to: SLGTFINHQAMSAAPRVCRLVVT*WPLIIS
Trigger: CGAGATGATCAATGGCCACAAGGTCACCACCAAGCG...GCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS TCA 90 bp GTGGTGGAGGTAGCAGAGGTTGTATCTTGTTCGGCTATACCACAGTaGCAGCTTCCACCTCTCAGTGGCTCACGACAAACATCTAGTTCC +
Preference number: 5 (lower is better)
Translates to: VVEVAEVVSCSAIPQ*QLPPLSGSRQTSSS
Trigger: GGAACTAGATGTTTGTCGTGAGCCACTGAGAGGTGGAAGCTGTCACTGTGGTATAGCCGAACAAGATACAACCTCTGCTACCTCCACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS CCA 90 bp AAGCTTCTGTTGGGCCATGATGTGTGGCAGTCTTGCTGCATCCCATaGTCAAGGCCAGTATCCATGGGGCAAAGAATGTTTCCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: KLLLGHDVWQSCCIP*SRPVSMGQRMFPSG
Trigger: TCCTGAAGGAAACATTCTTTGCCCCATGGATACTGGCCTTGACCATGGGATGCAGCAAGACTGCCACACATCATGGCCCAACAGAAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS TCA 90 bp CTTCAGGAAGGTTCTGCAAATCTCAGGGCAATAGGAAGAGAGGCCTaGGATTCCCATGGGGAAGAGGGAGTGAGCAGTTCTCCAACATAT +
Preference number: 5 (lower is better)
Translates to: LQEGSANLRAIGREA*DSHGEEGVSSSPTY
Trigger: ATATGTTGGAGAACTGCTCACTCCCTCTTCCCCATGGGAATCTCAGGCCTCTCTTCCTATTGCCCTGAGATTTGCAGAACCTTCCTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS CCA 90 bp ATGTGTGGCAGTCTTGCTGCATCCCATGGTCAAGGCCAGTATCCATaGGGCAAAGAATGTTTCCTTCAGGAAGGTTCTGCAAATCTCAGG +
Preference number: 5 (lower is better)
Translates to: MCGSLAASHGQGQYP*GKECFLQEGSANLR
Trigger: CCTGAGATTTGCAGAACCTTCCTGAAGGAAACATTCTTTGCCCCATGGATACTGGCCTTGACCATGGGATGCAGCAAGACTGCCACACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR CAA 90 bp AACTCACTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTAACAGCGAGCCTTTGTaGTGGTTGGCAGTGATGGTG +
Preference number: 5 (lower is better)
Translates to: NSLGTFINHQAMSAAPRVNSEPL*WLAVMV
Trigger: CACCATCACTGCCAACCACAACAAAGGCTCGCTGTT...AACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAGTGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS CCA 90 bp CTGTCCCTTGCAGGCTTGTTCCTCTTCCATGGTCTCCTTGCATCCTaGAGAAATCTGAGGGATTTTCCAGAATCCCATCACCGGTATAAT +
Preference number: 5 (lower is better)
Translates to: LSLAGLFLFHGLLAS*RNLRDFPESHHRYN
Trigger: ATTATACCGGTGATGGGATTCTGGAAAATCCCTCAGATTTCTCCAGGATGCAAGGAGACCATGGAAGAGGAACAAGCCTGCAAGGGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319153.3
CDS-3UTR CAA 90 bp CACTTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCAATACAAGGGATTaGGAGAGTGGAAAAGAGAGG +
Preference number: 5 (lower is better)
Translates to: HLAHLLTIRLCLRPHVFAANTRD*ESGKER
Trigger: CCTCTCTTTTCCACTCTCCAAATCCCTTGTATTGGC...AGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS GCA 90 bp TCTGTTGCTAACTTGGCATTACACCAACCTCTTCCATGGTCTCCTTaGATCCTGGAGAAATCTGAGGGATTTTCCAGAATCCCATCACCG +
Preference number: 5 (lower is better)
Translates to: SVANLALHQPLPWSP*ILEKSEGFSRIPSP
Trigger: CGGTGATGGGATTCTGGAAAATCCCTCAGATTTCTCCAGGATGCAAGGAGACCATGGAAGAGGTTGGTGTAATGCCAAGTTAGCAACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS-3UTR CAA 90 bp TTGGCACATTTATTAACCATCAGGCTATGTCTGCGGCCCCACGTGTTTGCTGCCGCTCTGTATTTTCTGTaGCTAACTTGGCATTACACC +
Preference number: 5 (lower is better)
Translates to: LAHLLTIRLCLRPHVFAAALYFL*LTWHYT
Trigger: GGTGTAATGCCAAGTTAGCAACAGAAAATACAGAGC...GGCAGCAAACACGTGGGGCCGCAGACATAGCCTGATGGTTAATAAATGTGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS CCA 90 bp CTAACTTGGCATTACACCAACCTCTTCCATGGTCTCCTTGCATCCTaGAGAAATCTGAGGGATTTTCCAGAATCCCATCACCGGTATAAT +
Preference number: 5 (lower is better)
Translates to: LTWHYTNLFHGLLAS*RNLRDFPESHHRYN
Trigger: ATTATACCGGTGATGGGATTCTGGAAAATCCCTCAGATTTCTCCAGGATGCAAGGAGACCATGGAAGAGGTTGGTGTAATGCCAAGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS CCA 90 bp TCTGTATTTTCTGTTGCTAACTTGGCATTACACCAACCTCTTCCATaGTCTCCTTGCATCCTGGAGAAATCTGAGGGATTTTCCAGAATC +
Preference number: 5 (lower is better)
Translates to: SVFSVANLALHQPLP*SPCILEKSEGFSRI
Trigger: GATTCTGGAAAATCCCTCAGATTTCTCCAGGATGCAAGGAGACCATGGAAGAGGTTGGTGTAATGCCAAGTTAGCAACAGAAAATACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS CCA 72 bp TGCGGCCCCACGTGTTTGCTGCCCCATGCACGGTGGTaGTGGTGGGAAGGCAGGGCCGGGTGGCCAGCGCCT +
Preference number: 6 (lower is better)
Translates to: CGPTCLLPHARW*WWEGRAGWPAP
Trigger: AGGCGCTGGCCACCCGGCCCTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGGGCCGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS CCA 72 bp GGGAACGTGGAGGCCAGGTGGGCGCAGGGGCCCAGCTaGTCAGATGGACGGGGGAGAAGTGGCCGGTGGTCT +
Preference number: 6 (lower is better)
Translates to: GNVEARWAQGPS*SDGRGRSGRWS
Trigger: AGACCACCGGCCACTTCTCCCCCGTCCATCTGACCAGCTGGGCCCCTGCGCCCACCTGGCCTCCACGTTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS CCA 72 bp CTGGTCAGATGGACGGGGGAGAAGTGGCCGGTGGTCTaGGGCCCTTCAGCAGGGGCCTGGCTGGACTCCGCA +
Preference number: 6 (lower is better)
Translates to: LVRWTGEKWPVV*GPSAGAWLDSA
Trigger: TGCGGAGTCCAGCCAGGCCCCTGCTGAAGGGCCCCAGACCACCGGCCACTTCTCCCCCGTCCATCTGACCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS CCA 72 bp CCCACGTGTTTGCTGCCCCATGCACGGTGGTGGTGGTaGGAAGGCAGGGCCGGGTGGCCAGCGCCTACTTGC +
Preference number: 6 (lower is better)
Translates to: PTCLLPHARWWW*EGRAGWPAPTC
Trigger: GCAAGTAGGCGCTGGCCACCCGGCCCTGCCTTCCCACCACCACCACCGTGCATGGGGCAGCAAACACGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS CCA 72 bp CACGGGATTCCAGCCTTGGTGAGTGACAAAGGTCTGTaGCCGTGGTGGGGGAGGCGGGCAAGGGCGTCCTGG +
Preference number: 6 (lower is better)
Translates to: HGIPALVSDKGL*PWWGRRARASW
Trigger: CCAGGACGCCCTTGCCCGCCTCCCCCACCACGGCCACAGACCTTTGTCACTCACCAAGGCTGGAATCCCGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS CAA 90 bp CGGGAGCCAAAGGGCAGAGGCAGGATCAGCCACGGGATTCCAGCCTaGGTGAGTGACAAAGGTCTGTGGCCGTGGTGGGGGAGGCGGGCA +
Preference number: 6 (lower is better)
Translates to: REPKGRGRISHGIPA*VSDKGLWPWWGRRA
Trigger: TGCCCGCCTCCCCCACCACGGCCACAGACCTTTGTCACTCACCAAGGCTGGAATCCCGTGGCTGATCCTGCCTCTGCCCTTTGGCTCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS TCA 72 bp AGGCAGGATCAGCCACGGGATTCCAGCCTTGGTGAGTaGCAAAGGTCTGTGGCCGTGGTGGGGGAGGCGGGC +
Preference number: 6 (lower is better)
Translates to: RQDQPRDSSLGE*QRSVAVVGEAG
Trigger: GCCCGCCTCCCCCACCACGGCCACAGACCTTTGTCACTCACCAAGGCTGGAATCCCGTGGCTGATCCTGCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS TCA 72 bp GCAGAGGCAGGATCAGCCACGGGATTCCAGCCTTGGTaGGTGACAAAGGTCTGTGGCCGTGGTGGGGGAGGC +
Preference number: 6 (lower is better)
Translates to: AEAGSATGFQPW*VTKVCGRGGGG
Trigger: GCCTCCCCCACCACGGCCACAGACCTTTGTCACTCACCAAGGCTGGAATCCCGTGGCTGATCCTGCCTCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS CCA 72 bp TGTGTGGGAATGGGATGCTCTGTGACCCAGGTGGTGTaGGCTGAGTCCCGGGAGCCAAAGGGCAGAGGCAGG +
Preference number: 6 (lower is better)
Translates to: CVGMGCSVTQVV*AESREPKGRGR
Trigger: CCTGCCTCTGCCCTTTGGCTCCCGGGACTCAGCCCACACCACCTGGGTCACAGAGCATCCCATTCCCACACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS CCA 72 bp CTGGAGCCCCCGAAGGAGGTGGATGAGAAGGTGGTGTaGCTGCCCCCGCTGCAGCCCAGCATGTTGAAGGAT +
Preference number: 6 (lower is better)
Translates to: LEPPKEVDEKVV*LPPLQPSMLKD
Trigger: ATCCTTCAACATGCTGGGCTGCAGCGGGGGCAGCCACACCACCTTCTCATCCACCTCCTTCGGGGGCTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS CAA 90 bp GGAAGGCAGGGCCGGGTGGCCAGCGCCTACTTGCTGTCCATCCATTaGAGCTGCTCCTTGCCGTTCACAGTCACCGACTTGAGCTGCCCG +
Preference number: 6 (lower is better)
Translates to: GRQGRVASAYLLSIH*SCSLPFTVTDLSCP
Trigger: CGGGCAGCTCAAGTCGGTGACTGTGAACGGCAAGGAGCAGCTCAAATGGATGGACAGCAAGTAGGCGCTGGCCACCCGGCCCTGCCTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS CAA 90 bp ACGGTGGTGGTGGTGGGAAGGCAGGGCCGGGTGGCCAGCGCCTACTaGCTGTCCATCCATTTGAGCTGCTCCTTGCCGTTCACAGTCACC +
Preference number: 6 (lower is better)
Translates to: TVVVVGRQGRVASAY*LSIHLSCSLPFTVT
Trigger: GGTGACTGTGAACGGCAAGGAGCAGCTCAAATGGATGGACAGCAAGTAGGCGCTGGCCACCCGGCCCTGCCTTCCCACCACCACCACCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS CAA 90 bp CCTGCTGTCCCTTGCAGGCTTGTTCCTGGGGCGGGAGAAAGATGCTaGCCCTGCACAGTTCTCCATGATGGCGGTGGCAGTGGGAGAGGC +
Preference number: 6 (lower is better)
Translates to: PAVPCRLVPGAGERC*PCTVLHDGGGSGRG
Trigger: GCCTCTCCCACTGCCACCGCCATCATGGAGAACTGTGCAGGGCAAGCATCTTTCTCCCGCCCCAGGAACAAGCCTGCAAGGGACAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS TCA 72 bp CAGGCAAACCTGGGCATATGGGCCTGCCCCTGCTGGTaGGGTGGCCACAACGGTGTGTGGGAATGGGATGCT +
Preference number: 6 (lower is better)
Translates to: QANLGIWACPCW*GGHNGVWEWDA
Trigger: AGCATCCCATTCCCACACACCGTTGTGGCCACCTCACCAGCAGGGGCAGGCCCATATGCCCAGGTTTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS CAA 72 bp AAGGGCAGAGGCAGGATCAGCCACGGGATTCCAGCCTaGGTGAGTGACAAAGGTCTGTGGCCGTGGTGGGGG +
Preference number: 6 (lower is better)
Translates to: KGRGRISHGIPA*VSDKGLWPWWG
Trigger: CCCCCACCACGGCCACAGACCTTTGTCACTCACCAAGGCTGGAATCCCGTGGCTGATCCTGCCTCTGCCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS CCA 72 bp CTGAGCCACAGGCTGAGGCATGGATGGGGAGCTTCCTaGAATACCGTGAGCTCCTCAGCAGCTCCCAGGCAA +
Preference number: 6 (lower is better)
Translates to: LSHRLRHGWGAS*NTVSSSAAPRQ
Trigger: TTGCCTGGGAGCTGCTGAGGAGCTCACGGTATTCCAGGAAGCTCCCCATCCATGCCTCAGCCTGTGGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS CCA 72 bp AAACCTGGGCATATGGGCCTGCCCCTGCTGGTGAGGTaGCCACAACGGTGTGTGGGAATGGGATGCTCTGTG +
Preference number: 6 (lower is better)
Translates to: KPGHMGLPLLVR*PQRCVGMGCSV
Trigger: CACAGAGCATCCCATTCCCACACACCGTTGTGGCCACCTCACCAGCAGGGGCAGGCCCATATGCCCAGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS CAA 72 bp CCCCTCAGGCCATGGCCCCGGCCACCACGGTCACTATaGAATGGGCTGTCCCAGAACTCAAAGGAGAAAGGG +
Preference number: 6 (lower is better)
Translates to: PLRPWPRPPRSL*NGLSQNSKEKG
Trigger: CCCTTTCTCCTTTGAGTTCTGGGACAGCCCATTCAATAGTGACCGTGGTGGCCGGGGCCATGGCCTGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS CCA 72 bp AGCAGCTCCCAGGCAAGCTCTAGAGAGCCGCTCACCTaGGAGCTGCAGGTGAGCATCTCGATTCCTTGTTCC +
Preference number: 6 (lower is better)
Translates to: SSSQASSREPLT*ELQVSISIPCS
Trigger: GGAACAAGGAATCGAGATGCTCACCTGCAGCTCCCAGGTGAGCGGCTCTCTAGAGCTTGCCTGGGAGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS CCA 72 bp CAGGCCATGGCCCCGGCCACCACGGTCACTATTGAATaGGCTGTCCCAGAACTCAAAGGAGAAAGGGTCCAG +
Preference number: 6 (lower is better)
Translates to: QAMAPATTVTIE*AVPELKGERVQ
Trigger: CTGGACCCTTTCTCCTTTGAGTTCTGGGACAGCCCATTCAATAGTGACCGTGGTGGCCGGGGCCATGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS CAA 72 bp TGGCCATTGATCATCTCGGTGGACGACATCACCGACTaGAACCCCGAGCTGCCAGAACTGGAGCCCCCGAAG +
Preference number: 6 (lower is better)
Translates to: WPLIISVDDITD*NPELPELEPPK
Trigger: CTTCGGGGGCTCCAGTTCTGGCAGCTCGGGGTTCAAGTCGGTGATGTCGTCCACCGAGATGATCAATGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS CAA 90 bp TCCTGCCCGTTCTCCACGATGCGCTTGGTGGTGACCTTGTGGCCATaGATCATCTCGGTGGACGACATCACCGACTTGAACCCCGAGCTG +
Preference number: 6 (lower is better)
Translates to: SCPFSTMRLVVTLWP*IISVDDITDLNPEL
Trigger: CAGCTCGGGGTTCAAGTCGGTGATGTCGTCCACCGAGATGATCAATGGCCACAAGGTCACCACCAAGCGCATCGTGGAGAACGGGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS CAA 90 bp GTGGATGAGAAGGTGGTGTGGCTGCCCCCGCTGCAGCCCAGCATGTaGAAGGATGAGAAGGCCTCCATGAAGGCCGGAAATTCTCCAAAG +
Preference number: 6 (lower is better)
Translates to: VDEKVVWLPPLQPSM*KDEKASMKAGNSPK
Trigger: CTTTGGAGAATTTCCGGCCTTCATGGAGGCCTTCTCATCCTTCAACATGCTGGGCTGCAGCGGGGGCAGCCACACCACCTTCTCATCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS GCA 72 bp GAGAGGCCGTTGCAGGCAGGTGACAATGGTGAGCTTTaGAACAGCTCGGGGCAATCTTCTGCGAAGACCCTG +
Preference number: 6 (lower is better)
Translates to: ERPLQAGDNGEL*NSSGQSSAKTL
Trigger: CAGGGTCTTCGCAGAAGATTGCCCCGAGCTGTTGCAAAGCTCACCATTGTCACCTGCCTGCAACGGCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS GCA 72 bp GTGGCCAGCGCCTACTTGCTGTCCATCCATTTGAGCTaGTCCTTGCCGTTCACAGTCACCGACTTGAGCTGC +
Preference number: 6 (lower is better)
Translates to: VASAYLLSIHLS*SLPFTVTDLSC
Trigger: GCAGCTCAAGTCGGTGACTGTGAACGGCAAGGAGCAGCTCAAATGGATGGACAGCAAGTAGGCGCTGGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS CCA 72 bp TGCCCGTTCTCCACGATGCGCTTGGTGGTGACCTTGTaGCCATTGATCATCTCGGTGGACGACATCACCGAC +
Preference number: 6 (lower is better)
Translates to: CPFSTMRLVVTL*PLIISVDDITD
Trigger: GTCGGTGATGTCGTCCACCGAGATGATCAATGGCCACAAGGTCACCACCAAGCGCATCGTGGAGAACGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS CCA 72 bp GCAGTTAGCACCTGCTGTCCCTTGCAGGCTTGTTCCTaGGGCGGGAGAAAGATGCTTGCCCTGCACAGTTCT +
Preference number: 6 (lower is better)
Translates to: AVSTCCPLQACS*GGRKMLALHSS
Trigger: AGAACTGTGCAGGGCAAGCATCTTTCTCCCGCCCCAGGAACAAGCCTGCAAGGGACAGCAGGTGCTAACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS CAA 72 bp TCCTGCCCGTTCTCCACGATGCGCTTGGTGGTGACCTaGTGGCCATTGATCATCTCGGTGGACGACATCACC +
Preference number: 6 (lower is better)
Translates to: SCPFSTMRLVVT*WPLIISVDDIT
Trigger: GGTGATGTCGTCCACCGAGATGATCAATGGCCACAAGGTCACCACCAAGCGCATCGTGGAGAACGGGCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS GCA 72 bp CCATGGGGAAGAGGGAGTGAGCAGTTCTCCAACATATaGCAGATGCTCAAGATGGGACTGACAGCGGGGCTG +
Preference number: 6 (lower is better)
Translates to: PWGRGSEQFSNI*QMLKMGLTAGL
Trigger: CAGCCCCGCTGTCAGTCCCATCTTGAGCATCTGGCATATGTTGGAGAACTGCTCACTCCCTCTTCCCCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS CCA 72 bp ACAGTGGCTGGCACACGAGGGCCGTCGGTAAACTCTTaGATGAACCAGGCTCAGAGACACACAGTGCTCAAG +
Preference number: 6 (lower is better)
Translates to: TVAGTRGPSVNS*MNQAQRHTVLK
Trigger: CTTGAGCACTGTGTGTCTCTGAGCCTGGTTCATCCAAGAGTTTACCGACGGCCCTCGTGTGCCAGCCACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS TCA 72 bp GTGCCACTCAGAGACAGCAGGAACTTGGGCTGCCTCTaGAAGCTTCTGTTGGGCCATGATGTGTGGCAGTCT +
Preference number: 6 (lower is better)
Translates to: VPLRDSRNLGCL*KLLLGHDVWQS
Trigger: AGACTGCCACACATCATGGCCCAACAGAAGCTTTCAGAGGCAGCCCAAGTTCCTGCTGTCTCTGAGTGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS TCA 72 bp TGGAGAATCAGCTCTGACCTGCACACCCCTCTCTCATaGCAGTGCCACTCAGAGACAGCAGGAACTTGGGCT +
Preference number: 6 (lower is better)
Translates to: WRISSDLHTPLS*QCHSETAGTWA
Trigger: AGCCCAAGTTCCTGCTGTCTCTGAGTGGCACTGTCATGAGAGAGGGGTGTGCAGGTCAGAGCTGATTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS CAA 90 bp GAGCCTGCCAATACAAGGGATTTGGAGAGTGGAAAAGAGAGGCCGTaGCAGGCAGGTGACAATGGTGAGCTTTGCAACAGCTCGGGGCAA +
Preference number: 6 (lower is better)
Translates to: EPANTRDLESGKERP*QAGDNGELCNSSGQ
Trigger: TTGCCCCGAGCTGTTGCAAAGCTCACCATTGTCACCTGCCTGCAACGGCCTCTCTTTTCCACTCTCCAAATCCCTTGTATTGGCAGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS GCA 72 bp AAGCTTCTGTTGGGCCATGATGTGTGGCAGTCTTGCTaGATCCCATGGTCAAGGCCAGTATCCATGGGGCAA +
Preference number: 6 (lower is better)
Translates to: KLLLGHDVWQSC*IPWSRPVSMGQ
Trigger: TTGCCCCATGGATACTGGCCTTGACCATGGGATGCAGCAAGACTGCCACACATCATGGCCCAACAGAAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS CAA 72 bp TTCTCCACGATGCGCTTGGTGGTGACCTTGTGGCCATaGATCATCTCGGTGGACGACATCACCGACTTGAAC +
Preference number: 6 (lower is better)
Translates to: FSTMRLVVTLWP*IISVDDITDLN
Trigger: GTTCAAGTCGGTGATGTCGTCCACCGAGATGATCAATGGCCACAAGGTCACCACCAAGCGCATCGTGGAGAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS CAA 90 bp ATTTTTGTCACTATGTCTCGGTTAGCAGTTAGCACCTGCTGTCCCTaGCAGGCTTGTTCCTGGGGCGGGAGAAAGATGCTTGCCCTGCAC +
Preference number: 6 (lower is better)
Translates to: IFVTMSRLAVSTCCP*QACSWGGRKMLALH
Trigger: GTGCAGGGCAAGCATCTTTCTCCCGCCCCAGGAACAAGCCTGCAAGGGACAGCAGGTGCTAACTGCTAACCGAGACATAGTGACAAAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS GCA 72 bp ATTTTTGTCACTATGTCTCGGTTAGCAGTTAGCACCTaGTGTCCCTTGCAGGCTTGTTCCTGGGGCGGGAGA +
Preference number: 6 (lower is better)
Translates to: IFVTMSRLAVST*CPLQACSWGGR
Trigger: TCTCCCGCCCCAGGAACAAGCCTGCAAGGGACAGCAGGTGCTAACTGCTAACCGAGACATAGTGACAAAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS CAA 72 bp CAGCGTGTAGTAAATGTCCTCCTCCTTGGTACACATTaGAGGGCTGTGTACTGTGAGGGTGATGGCGGCTCA +
Preference number: 6 (lower is better)
Translates to: QRVVNVLLLGTH*RAVYCEGDGGS
Trigger: TGAGCCGCCATCACCCTCACAGTACACAGCCCTCAAATGTGTACCAAGGAGGAGGACATTTACTACACGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319153.3
CDS CAA 90 bp TGCAGGTATGATGAGGAGGTGATGGGAATGGCTCCTAGTGAGCCATaGGTGTGGTTGGCAGTGGTGACAGTAATGGTGATGATGAAGGTG +
Preference number: 6 (lower is better)
Translates to: CRYDEEVMGMAPSEP*VWLAVVTVMVMMKV
Trigger: CACCTTCATCATCACCATTACTGTCACCACTGCCAACCACACCAATGGCTCACTAGGAGCCATTCCCATCACCTCCTCATCATACCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS CCA 72 bp TTGGGCCATGATGTGTGGCAGTCTTGCTGCATCCCATaGTCAAGGCCAGTATCCATGGGGCAAAGAATGTTT +
Preference number: 6 (lower is better)
Translates to: LGHDVWQSCCIP*SRPVSMGQRMF
Trigger: AAACATTCTTTGCCCCATGGATACTGGCCTTGACCATGGGATGCAGCAAGACTGCCACACATCATGGCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS CCA 72 bp TGTGTTGCTGGTGGGGAGAGGCACGGTGGGTGTCCATaGAGATGGATAAGGTGTCATTATATAGTAGAGGTG +
Preference number: 6 (lower is better)
Translates to: CVAGGERHGGCP*RWIRCHYIVEV
Trigger: CACCTCTACTATATAATGACACCTTATCCATCTCCATGGACACCCACCGTGCCTCTCCCCACCAGCAACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS CAA 72 bp GAAGGTGAAGGTGGTGGAGGTAGCAGAGGTTGTATCTaGTTCGGCTATACCACAGTGACAGCTTCCACCTCT +
Preference number: 6 (lower is better)
Translates to: EGEGGGGSRGCI*FGYTTVTASTS
Trigger: AGAGGTGGAAGCTGTCACTGTGGTATAGCCGAACAAGATACAACCTCTGCTACCTCCACCACCTTCACCTTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS CAA 90 bp ATGGCGATGGTGATGGCACTGAGGTGTGGGGCTCTGTATTTTCTGTaGCTAACTTGGCATTACACCAACCTCTTCCATGGTCTCCTTGCA +
Preference number: 6 (lower is better)
Translates to: MAMVMALRCGALYFL*LTWHYTNLFHGLLA
Trigger: TGCAAGGAGACCATGGAAGAGGTTGGTGTAATGCCAAGTTAGCAACAGAAAATACAGAGCCCCACACCTCAGTGCCATCACCATCGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS TCA 72 bp GTAGCAGAGGTTGTATCTTGTTCGGCTATACCACAGTaGCAGCTTCCACCTCTCAGTGGCTCACGACAAACA +
Preference number: 6 (lower is better)
Translates to: VAEVVSCSAIPQ*QLPPLSGSRQT
Trigger: TGTTTGTCGTGAGCCACTGAGAGGTGGAAGCTGTCACTGTGGTATAGCCGAACAAGATACAACCTCTGCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS GCA 72 bp ATACAAGGGATTTGGAGAGTGGAAAAGAGAGGCCGTTaGAGGCAGGTGACAATGGTGAGCTTTGCAACAGCT +
Preference number: 6 (lower is better)
Translates to: IQGIWRVEKRGR*RQVTMVSFATA
Trigger: AGCTGTTGCAAAGCTCACCATTGTCACCTGCCTGCAACGGCCTCTCTTTTCCACTCTCCAAATCCCTTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS CAA 90 bp ATTTTTGTCACTATGTCTCGGTTAGCAGTTAGCACCTGCTGTCCCTaGCAGGCTTGTTCCTCTTCCATGGTCTCCTTGCATCCTGGAGAA +
Preference number: 6 (lower is better)
Translates to: IFVTMSRLAVSTCCP*QACSSSMVSLHPGE
Trigger: TTCTCCAGGATGCAAGGAGACCATGGAAGAGGAACAAGCCTGCAAGGGACAGCAGGTGCTAACTGCTAACCGAGACATAGTGACAAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319153.3
CDS GCA 72 bp ATTTTTGTCACTATGTCTCGGTTAGCAGTTAGCACCTaGTGTCCCTTGCAGGCTTGTTCCTCTTCCATGGTC +
Preference number: 6 (lower is better)
Translates to: IFVTMSRLAVST*CPLQACSSSMV
Trigger: GACCATGGAAGAGGAACAAGCCTGCAAGGGACAGCAGGTGCTAACTGCTAACCGAGACATAGTGACAAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319153.3
CDS CAA 72 bp TATAATTCCAGACTAGAGCCTGCCAATACAAGGGATTaGGAGAGTGGAAAAGAGAGGCCGTTGCAGGCAGGT +
Preference number: 6 (lower is better)
Translates to: YNSRLEPANTRD*ESGKERPLQAG
Trigger: ACCTGCCTGCAACGGCCTCTCTTTTCCACTCTCCAAATCCCTTGTATTGGCAGGCTCTAGTCTGGAATTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS CAA 72 bp TCTACACCTGCTGACACATGTGGCTTAGCAGAGGAGTaGAAGAGCAGAACTTCTCCACTGGATGTAGCTACA +
Preference number: 6 (lower is better)
Translates to: STPADTCGLAEE*KSRTSPLDVAT
Trigger: TGTAGCTACATCCAGTGGAGAAGTTCTGCTCTTCAACTCCTCTGCTAAGCCACATGTGTCAGCAGGTGTAGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS CAA 72 bp GTGATGGCACTGAGGTGTGGGGCTCTGTATTTTCTGTaGCTAACTTGGCATTACACCAACCTCTTCCATGGT +
Preference number: 6 (lower is better)
Translates to: VMALRCGALYFL*LTWHYTNLFHG
Trigger: ACCATGGAAGAGGTTGGTGTAATGCCAAGTTAGCAACAGAAAATACAGAGCCCCACACCTCAGTGCCATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS CAA 90 bp CCACTCAATTCTACACCTGCTGACACATGTGGCTTAGCAGAGGAGTaGAAGAGCAGAACTTCTCCACTGGATGTAGCTACAGATGAACCT +
Preference number: 6 (lower is better)
Translates to: PLNSTPADTCGLAEE*KSRTSPLDVATDEP
Trigger: AGGTTCATCTGTAGCTACATCCAGTGGAGAAGTTCTGCTCTTCAACTCCTCTGCTAAGCCACATGTGTCAGCAGGTGTAGAATTGAGTGG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319153.3
ENST00000469083.1
CDS CCA 72 bp CATTACACCAACCTCTTCCATGGTCTCCTTGCATCCTaGAGAAATCTGAGGGATTTTCCAGAATCCCATCAC +
Preference number: 6 (lower is better)
Translates to: HYTNLFHGLLAS*RNLRDFPESHH
Trigger: GTGATGGGATTCTGGAAAATCCCTCAGATTTCTCCAGGATGCAAGGAGACCATGGAAGAGGTTGGTGTAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS GCA 72 bp AACTTGGCATTACACCAACCTCTTCCATGGTCTCCTTaGATCCTGGAGAAATCTGAGGGATTTTCCAGAATC +
Preference number: 6 (lower is better)
Translates to: NLALHQPLPWSP*ILEKSEGFSRI
Trigger: GATTCTGGAAAATCCCTCAGATTTCTCCAGGATGCAAGGAGACCATGGAAGAGGTTGGTGTAATGCCAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469083.1
CDS CCA 72 bp TCTGTTGCTAACTTGGCATTACACCAACCTCTTCCATaGTCTCCTTGCATCCTGGAGAAATCTGAGGGATTT +
Preference number: 6 (lower is better)
Translates to: SVANLALHQPLP*SPCILEKSEGF
Trigger: AAATCCCTCAGATTTCTCCAGGATGCAAGGAGACCATGGAAGAGGTTGGTGTAATGCCAAGTTAGCAACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469083.1